BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019556
(339 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|343466165|gb|AEM42976.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Siraitia
grosvenorii]
Length = 470
Score = 623 bits (1607), Expect = e-176, Method: Compositional matrix adjust.
Identities = 296/336 (88%), Positives = 320/336 (95%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFP+EKIWITNEIIHNPTVNKRLEEM V+NIP+EEGKKQF+VVNKGDVV+LPA
Sbjct: 135 IAYEARKQFPDEKIWITNEIIHNPTVNKRLEEMEVENIPLEEGKKQFEVVNKGDVVILPA 194
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGAAV+EM+TL+ KNVQIVDTTCPWVSKVW VEKHKKGD+TSIIHGKY+HEETVATASF
Sbjct: 195 FGAAVDEMLTLSEKNVQIVDTTCPWVSKVWNVVEKHKKGDFTSIIHGKYAHEETVATASF 254
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKYIIVKNM EA YVCDYILGGEL+GSS TKE F++KFK AVSKGFDPD+DLVKVGIAN
Sbjct: 255 AGKYIIVKNMAEATYVCDYILGGELDGSSPTKEEFMKKFKNAVSKGFDPDIDLVKVGIAN 314
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETEEIGKLVE+TMMRK GVENVNEHFISFNTICDATQERQDAMYK+VE K+DL
Sbjct: 315 QTTMLKGETEEIGKLVERTMMRKHGVENVNEHFISFNTICDATQERQDAMYKLVEGKLDL 374
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
+LVVGGWNSSNTSHLQ+IAEDRGIPSYW+DSE+RIGPGNKIAYKL HGELVEKENWLP+G
Sbjct: 375 MLVVGGWNSSNTSHLQQIAEDRGIPSYWVDSEQRIGPGNKIAYKLNHGELVEKENWLPRG 434
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 339
ITIG+TSGASTPDK VEDVL KVF+IKREEALQ A
Sbjct: 435 PITIGVTSGASTPDKVVEDVLIKVFDIKREEALQFA 470
>gi|164605002|dbj|BAF98297.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Hevea
brasiliensis]
Length = 462
Score = 623 bits (1606), Expect = e-176, Method: Compositional matrix adjust.
Identities = 300/336 (89%), Positives = 323/336 (96%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFP+EKIWITNEIIHNPTVNKRLEEM VQNIPV EGKK F+VV+ GDVV+LPA
Sbjct: 127 IAYEARKQFPDEKIWITNEIIHNPTVNKRLEEMNVQNIPVGEGKKHFEVVDSGDVVILPA 186
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGAAVEEM+TL+NKNVQIVDTTCPWVSKVW +VEKHKKG+YTSIIHGKYSHEET+ATASF
Sbjct: 187 FGAAVEEMLTLSNKNVQIVDTTCPWVSKVWNTVEKHKKGEYTSIIHGKYSHEETIATASF 246
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGK+IIVKNM+EA YVCDYILGG+LNGSSSTKEAFLEKFK AVSKGFDPDVDL KVGIAN
Sbjct: 247 AGKHIIVKNMEEAMYVCDYILGGQLNGSSSTKEAFLEKFKYAVSKGFDPDVDLDKVGIAN 306
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETEEIGKLVEKTMMRK+GVENVN+HFISFNTICDATQERQDAM+K+VEEK+DL
Sbjct: 307 QTTMLKGETEEIGKLVEKTMMRKYGVENVNDHFISFNTICDATQERQDAMFKLVEEKLDL 366
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
ILVVGGWNSSNTSHLQEIAE RGIPSYWIDSE+RIGPGNKIAYKL HGELVEKEN+LP+G
Sbjct: 367 ILVVGGWNSSNTSHLQEIAELRGIPSYWIDSEQRIGPGNKIAYKLNHGELVEKENFLPEG 426
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 339
ITIGITSGASTPDK VEDVL KVF+IKR+EALQ+A
Sbjct: 427 PITIGITSGASTPDKVVEDVLVKVFDIKRDEALQVA 462
>gi|224105455|ref|XP_002313816.1| predicted protein [Populus trichocarpa]
gi|222850224|gb|EEE87771.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 622 bits (1605), Expect = e-176, Method: Compositional matrix adjust.
Identities = 294/336 (87%), Positives = 322/336 (95%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFP++KIWITNEIIHNPTVNKRLEEM V+N+PVEEGKKQF+VVN GDVV+LPA
Sbjct: 125 IAYEARKQFPDDKIWITNEIIHNPTVNKRLEEMEVENVPVEEGKKQFEVVNGGDVVILPA 184
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGAAV+EM+TL++KNVQIVDTTCPWVSKVWT+VEKHKKGDYTSIIHGKY+HEETVATASF
Sbjct: 185 FGAAVDEMLTLSSKNVQIVDTTCPWVSKVWTTVEKHKKGDYTSIIHGKYAHEETVATASF 244
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKYIIVK+MKEA YVCDYILGGELNGSSST+E FLEKFK AVSKGFDPD DLVK+GIAN
Sbjct: 245 AGKYIIVKDMKEAMYVCDYILGGELNGSSSTREEFLEKFKNAVSKGFDPDSDLVKLGIAN 304
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETE+IGKLVE+ MMRK+GVENVN+HFISFNTICDATQERQDAMYK+VEEK+DL
Sbjct: 305 QTTMLKGETEDIGKLVERIMMRKYGVENVNDHFISFNTICDATQERQDAMYKLVEEKLDL 364
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
+LVVGGWNSSNTSHLQEIAE GIPSYWIDSE+RIGPGNKIAYKL HGELVEKENWLP+G
Sbjct: 365 MLVVGGWNSSNTSHLQEIAEHHGIPSYWIDSEQRIGPGNKIAYKLNHGELVEKENWLPQG 424
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 339
ITIG+TSGASTPDK VED L KVF+IKR+EALQ+A
Sbjct: 425 PITIGVTSGASTPDKVVEDALIKVFDIKRDEALQVA 460
>gi|255556135|ref|XP_002519102.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, putative
[Ricinus communis]
gi|223541765|gb|EEF43313.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, putative
[Ricinus communis]
Length = 466
Score = 622 bits (1603), Expect = e-176, Method: Compositional matrix adjust.
Identities = 294/336 (87%), Positives = 322/336 (95%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFP+EKIWITNEIIHNPTVNKRLEEM V+NIP+EEG+KQF+VVN GDVV+LPA
Sbjct: 131 IAYEARKQFPDEKIWITNEIIHNPTVNKRLEEMNVENIPLEEGRKQFEVVNNGDVVILPA 190
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGAAV+EM+TL+NKNVQIVDTTCPWVSKVW +VEKHKKGDYTSIIHGKYSHEET+ATASF
Sbjct: 191 FGAAVDEMLTLSNKNVQIVDTTCPWVSKVWNTVEKHKKGDYTSIIHGKYSHEETIATASF 250
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG YIIVKNMKEA YVCDYILGG+LNGSSSTKE FL+KFK AVSKGFDPDVDLVKVGIAN
Sbjct: 251 AGTYIIVKNMKEAMYVCDYILGGQLNGSSSTKEEFLKKFKNAVSKGFDPDVDLVKVGIAN 310
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETE+IGKLVEKTMM+++GVENVN+HFISFNTICDATQERQDAM+ +VEEK+DL
Sbjct: 311 QTTMLKGETEDIGKLVEKTMMQRYGVENVNDHFISFNTICDATQERQDAMFNLVEEKLDL 370
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
ILV+GGWNSSNTSHLQEIAE RGIPSYWIDSE+RIGPGN+IAYKL HGELVEKEN+LP+G
Sbjct: 371 ILVIGGWNSSNTSHLQEIAELRGIPSYWIDSEQRIGPGNRIAYKLNHGELVEKENFLPEG 430
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 339
ITIG+TSGASTPDK VED L KVF+IKREEALQLA
Sbjct: 431 PITIGVTSGASTPDKVVEDALVKVFDIKREEALQLA 466
>gi|195928050|gb|ACG55683.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Hevea
brasiliensis]
Length = 462
Score = 621 bits (1601), Expect = e-175, Method: Compositional matrix adjust.
Identities = 298/336 (88%), Positives = 322/336 (95%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFP+EKIWITNEIIHNPTVNKRLEEM VQNIPV EGKK F+VV+ GDVV+LPA
Sbjct: 127 IAYEARKQFPDEKIWITNEIIHNPTVNKRLEEMNVQNIPVGEGKKHFEVVDSGDVVILPA 186
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGAAVEEM+TL+NKNVQIVDTTCPWVSKVW +VEKHKKG+YTSIIHGKYSHEET+ATASF
Sbjct: 187 FGAAVEEMLTLSNKNVQIVDTTCPWVSKVWNTVEKHKKGEYTSIIHGKYSHEETIATASF 246
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGK+IIVKNM+EA YVCDYILGG+LNGSSSTKEAFLEKFK AVSKGFDPDVDL K G+AN
Sbjct: 247 AGKHIIVKNMEEAMYVCDYILGGQLNGSSSTKEAFLEKFKYAVSKGFDPDVDLDKAGVAN 306
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETEEIGKLVEKTMMRK+GVENVN+HFISFNTICDATQERQDAM+K+VEEK+DL
Sbjct: 307 QTTMLKGETEEIGKLVEKTMMRKYGVENVNDHFISFNTICDATQERQDAMFKLVEEKLDL 366
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
ILVVGGWNSSNTSHLQEIAE RGIPSYWIDSE+RIGPGNKIAYKL HGELVEKEN+LP+G
Sbjct: 367 ILVVGGWNSSNTSHLQEIAELRGIPSYWIDSEQRIGPGNKIAYKLNHGELVEKENFLPEG 426
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 339
ITIGITSGASTPDK VEDVL KVF+IKR+EALQ+A
Sbjct: 427 PITIGITSGASTPDKVVEDVLVKVFDIKRDEALQVA 462
>gi|189017050|gb|ACD70402.1| putative chloroplast 4-hydroxy-3-methylbut-2-en-1-yl diphosphate
reductase [Populus trichocarpa]
Length = 426
Score = 620 bits (1600), Expect = e-175, Method: Compositional matrix adjust.
Identities = 294/336 (87%), Positives = 322/336 (95%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFP++KIWITNEIIHNPTVNKRLEEM V+N+PVEEGKKQF+VVN GDVV+LPA
Sbjct: 91 IAYEARKQFPDDKIWITNEIIHNPTVNKRLEEMEVENVPVEEGKKQFEVVNGGDVVILPA 150
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGAAV+EM+TL++KNVQIVDTTCPWVSKVWT+VEKHKKGDYTSIIHGKY+HEETVATASF
Sbjct: 151 FGAAVDEMLTLSSKNVQIVDTTCPWVSKVWTTVEKHKKGDYTSIIHGKYAHEETVATASF 210
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKYIIVK+MKEA YVCDYILGGELNGSSST+E FLEKFK AVSKGFDPD DLVK+GIAN
Sbjct: 211 AGKYIIVKDMKEAMYVCDYILGGELNGSSSTREEFLEKFKNAVSKGFDPDSDLVKLGIAN 270
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETE+IGKLVE+ MMRK+GVENVN+HFISFNTICDATQERQDAMYK+VEEK+DL
Sbjct: 271 QTTMLKGETEDIGKLVERIMMRKYGVENVNDHFISFNTICDATQERQDAMYKLVEEKLDL 330
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
+LVVGGWNSSNTSHLQEIAE GIPSYWIDSE+RIGPGNKIAYKL HGELVEKENWLP+G
Sbjct: 331 MLVVGGWNSSNTSHLQEIAEHHGIPSYWIDSEQRIGPGNKIAYKLNHGELVEKENWLPQG 390
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 339
ITIG+TSGASTPDK VED L KVF+IKR+EALQ+A
Sbjct: 391 PITIGVTSGASTPDKVVEDALIKVFDIKRDEALQVA 426
>gi|356538819|ref|XP_003537898.1| PREDICTED: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase-like
[Glycine max]
Length = 462
Score = 620 bits (1600), Expect = e-175, Method: Compositional matrix adjust.
Identities = 292/336 (86%), Positives = 319/336 (94%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFP E IWITNEIIHNPTVNKRLEEM VQNIP+EE KQFDVVNKGDVV+LPA
Sbjct: 127 IAYEARKQFPTETIWITNEIIHNPTVNKRLEEMNVQNIPLEESGKQFDVVNKGDVVILPA 186
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGAAVEEM+TL+ KNVQIVDTTCPWV+KVW SVEKHK+GDYTS+IHGKY+HEETVATASF
Sbjct: 187 FGAAVEEMLTLSEKNVQIVDTTCPWVAKVWNSVEKHKQGDYTSVIHGKYAHEETVATASF 246
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFK AVS+GFDPD DL+K GIAN
Sbjct: 247 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKFAVSEGFDPDRDLIKAGIAN 306
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETE+IGKL+E+TMM K+GVEN+NEHF+SFNTICDATQERQDAMYK+VEE +DL
Sbjct: 307 QTTMLKGETEDIGKLLERTMMHKYGVENINEHFMSFNTICDATQERQDAMYKLVEEDLDL 366
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
+LVVGGWNSSNTSHLQEIAE+RGIPSYWIDSE+RIGPGNKIAYKL HGELVEKENWLP+G
Sbjct: 367 MLVVGGWNSSNTSHLQEIAEERGIPSYWIDSEQRIGPGNKIAYKLNHGELVEKENWLPEG 426
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 339
ITIG+TSGASTPDK VED L +VF++KREEA+QLA
Sbjct: 427 PITIGVTSGASTPDKVVEDALIRVFDLKREEAMQLA 462
>gi|356545301|ref|XP_003541082.1| PREDICTED: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase-like
[Glycine max]
Length = 380
Score = 619 bits (1597), Expect = e-175, Method: Compositional matrix adjust.
Identities = 292/336 (86%), Positives = 319/336 (94%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFP E IW+TNEIIHNPTVNKRLEEM VQNIP+EEG KQFDVVNKGDVV+LPA
Sbjct: 45 IAYEARKQFPTETIWLTNEIIHNPTVNKRLEEMNVQNIPLEEGGKQFDVVNKGDVVILPA 104
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGAAVEEM+TL+ KNVQIVDTTCPWV+KVW SVEKHK+ DYTS+IHGKY+HEETVATASF
Sbjct: 105 FGAAVEEMLTLSEKNVQIVDTTCPWVAKVWNSVEKHKQRDYTSVIHGKYAHEETVATASF 164
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKYIIVKNM EAEYVCDYILGGELNGSSSTKEAFLEKFK AVS+GFDPD DL+K GIAN
Sbjct: 165 AGKYIIVKNMAEAEYVCDYILGGELNGSSSTKEAFLEKFKFAVSEGFDPDRDLIKAGIAN 224
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETEEIGKL+E+TMMRK+GVEN+NEHF+SFNTICDATQERQDAMYK+VEE +DL
Sbjct: 225 QTTMLKGETEEIGKLLERTMMRKYGVENINEHFMSFNTICDATQERQDAMYKLVEEDLDL 284
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
+LVVGGWNSSNTSHLQEIAE+RGIPSYWIDSE+RIGPGNKIAYKL HGELVEKENWLP+G
Sbjct: 285 MLVVGGWNSSNTSHLQEIAEERGIPSYWIDSEQRIGPGNKIAYKLNHGELVEKENWLPEG 344
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 339
ITIG+TSGASTPDK VED L +VF++KREEA+QLA
Sbjct: 345 PITIGVTSGASTPDKVVEDALIRVFDLKREEAMQLA 380
>gi|225428566|ref|XP_002284659.1| PREDICTED: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Vitis vinifera]
Length = 465
Score = 617 bits (1592), Expect = e-174, Method: Compositional matrix adjust.
Identities = 290/336 (86%), Positives = 322/336 (95%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFPEEKIWITNEIIHNPTVN+RL EM V++IP+++G+KQF+VV+KGDVV+LPA
Sbjct: 130 IAYEARKQFPEEKIWITNEIIHNPTVNQRLAEMEVKDIPIDDGQKQFEVVDKGDVVILPA 189
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGAAV+EM+TL+NKNVQIVDTTCPWVSKVW VEKHKKG+YTSIIHGKYSHEET+ATASF
Sbjct: 190 FGAAVDEMLTLSNKNVQIVDTTCPWVSKVWNIVEKHKKGEYTSIIHGKYSHEETIATASF 249
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKYIIVKNM EA YVCDYILGGEL+GSSST+E F EKFK A+S+GFDPD+DL KVGIAN
Sbjct: 250 AGKYIIVKNMAEAMYVCDYILGGELDGSSSTREEFFEKFKFAISEGFDPDIDLSKVGIAN 309
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETEEIGKLVE+TMMRK+GVENVN HFISFNTICDATQERQDAMYK+VEEK+D+
Sbjct: 310 QTTMLKGETEEIGKLVERTMMRKYGVENVNNHFISFNTICDATQERQDAMYKLVEEKLDV 369
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
+LVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGN+I++KLMHGELVEKENWLP+G
Sbjct: 370 MLVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNRISHKLMHGELVEKENWLPEG 429
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 339
ITIG+TSGASTPDK VEDVL KVF+IKREEALQLA
Sbjct: 430 PITIGVTSGASTPDKVVEDVLIKVFDIKREEALQLA 465
>gi|255641515|gb|ACU21031.1| unknown [Glycine max]
Length = 380
Score = 617 bits (1591), Expect = e-174, Method: Compositional matrix adjust.
Identities = 291/336 (86%), Positives = 318/336 (94%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFP E IW+TNEIIHNPTVNKRLEEM VQNIP+EEG KQFDVVNKGDVV+LPA
Sbjct: 45 IAYEARKQFPTETIWLTNEIIHNPTVNKRLEEMNVQNIPLEEGGKQFDVVNKGDVVILPA 104
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
GAAVEEM+TL+ KNVQIVDTTCPWV+KVW SVEKHK+ DYTS+IHGKY+HEETVATASF
Sbjct: 105 LGAAVEEMLTLSEKNVQIVDTTCPWVAKVWNSVEKHKQRDYTSVIHGKYAHEETVATASF 164
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKYIIVKNM EAEYVCDYILGGELNGSSSTKEAFLEKFK AVS+GFDPD DL+K GIAN
Sbjct: 165 AGKYIIVKNMAEAEYVCDYILGGELNGSSSTKEAFLEKFKFAVSEGFDPDRDLIKAGIAN 224
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETEEIGKL+E+TMMRK+GVEN+NEHF+SFNTICDATQERQDAMYK+VEE +DL
Sbjct: 225 QTTMLKGETEEIGKLLERTMMRKYGVENINEHFMSFNTICDATQERQDAMYKLVEEDLDL 284
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
+LVVGGWNSSNTSHLQEIAE+RGIPSYWIDSE+RIGPGNKIAYKL HGELVEKENWLP+G
Sbjct: 285 MLVVGGWNSSNTSHLQEIAEERGIPSYWIDSEQRIGPGNKIAYKLNHGELVEKENWLPEG 344
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 339
ITIG+TSGASTPDK VED L +VF++KREEA+QLA
Sbjct: 345 PITIGVTSGASTPDKVVEDALIRVFDLKREEAMQLA 380
>gi|114329246|gb|ABI64152.1| hydroxymethylbutenyl diphosphate reductase [Camptotheca acuminata]
Length = 459
Score = 617 bits (1591), Expect = e-174, Method: Compositional matrix adjust.
Identities = 291/336 (86%), Positives = 320/336 (95%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFP+EKIWITNEII NPTVNKRLEEM V+NIP+E+GKKQFDVV+KGDVV+LPA
Sbjct: 124 IAYEARKQFPDEKIWITNEIIRNPTVNKRLEEMEVENIPIEDGKKQFDVVDKGDVVILPA 183
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA V+EM+ L++KNVQIVDTTCPWVSKVW +VEKHKKG+YTSIIHGKYSHEETVATASF
Sbjct: 184 FGAGVDEMLVLSDKNVQIVDTTCPWVSKVWNTVEKHKKGEYTSIIHGKYSHEETVATASF 243
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGK+IIVKNM EA YVCDYILGGEL+GSSSTKEAFLEKFK AVSKGFDPD DL KVGIAN
Sbjct: 244 AGKFIIVKNMAEATYVCDYILGGELDGSSSTKEAFLEKFKYAVSKGFDPDSDLAKVGIAN 303
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETEEIGKLVE+TMMRK+GVENVNEHFISFNTICDATQERQDAMYK+VEE +DL
Sbjct: 304 QTTMLKGETEEIGKLVERTMMRKYGVENVNEHFISFNTICDATQERQDAMYKLVEENLDL 363
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
+LV+GGWNSSNTSHLQEI+E RGIPSYWIDSE+R+GPGNKI++KL HGELVEKENWLP+G
Sbjct: 364 MLVIGGWNSSNTSHLQEISELRGIPSYWIDSEQRVGPGNKISFKLNHGELVEKENWLPQG 423
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 339
+TIG+TSGASTPDK VEDVL KVF+IKREEALQLA
Sbjct: 424 PVTIGVTSGASTPDKVVEDVLIKVFDIKREEALQLA 459
>gi|353453158|gb|AER00471.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase [Tanacetum
parthenium]
Length = 455
Score = 615 bits (1587), Expect = e-174, Method: Compositional matrix adjust.
Identities = 292/336 (86%), Positives = 318/336 (94%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFP+EKIWITNEIIHNPTVNKRLEEM V +IP++ G+KQFDVV+KGDVV+LPA
Sbjct: 120 IAYEARKQFPDEKIWITNEIIHNPTVNKRLEEMEVMDIPIDGGEKQFDVVDKGDVVILPA 179
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGAAV+EM+TL+NK VQIVDTTCPWVSKVW VEKHKKGDYTSIIHGKY+HEETVATASF
Sbjct: 180 FGAAVDEMLTLSNKQVQIVDTTCPWVSKVWNIVEKHKKGDYTSIIHGKYNHEETVATASF 239
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKYIIVKNM EA YVCDYILGG+L GSSSTKEAF+EKFK AVSKGFDPD DLVK GIAN
Sbjct: 240 AGKYIIVKNMDEATYVCDYILGGKLTGSSSTKEAFMEKFKSAVSKGFDPDKDLVKAGIAN 299
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETEEIGKL+E+TMM+KFGVENVN HF+SFNTICDATQERQDAMYK+V+EKVDL
Sbjct: 300 QTTMLKGETEEIGKLLERTMMQKFGVENVNNHFLSFNTICDATQERQDAMYKLVDEKVDL 359
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
+LV+GG+NSSNTSHLQEIAEDR IPSYWIDSEKRIGPGN+IAYKL+HGELVE+ENWLPKG
Sbjct: 360 MLVIGGFNSSNTSHLQEIAEDRKIPSYWIDSEKRIGPGNRIAYKLLHGELVEQENWLPKG 419
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 339
ITIG+TSGASTPDK VED L KVFEIKREEALQLA
Sbjct: 420 PITIGVTSGASTPDKVVEDALLKVFEIKREEALQLA 455
>gi|297741414|emb|CBI32545.3| unnamed protein product [Vitis vinifera]
Length = 380
Score = 615 bits (1586), Expect = e-173, Method: Compositional matrix adjust.
Identities = 290/336 (86%), Positives = 322/336 (95%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFPEEKIWITNEIIHNPTVN+RL EM V++IP+++G+KQF+VV+KGDVV+LPA
Sbjct: 45 IAYEARKQFPEEKIWITNEIIHNPTVNQRLAEMEVKDIPIDDGQKQFEVVDKGDVVILPA 104
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGAAV+EM+TL+NKNVQIVDTTCPWVSKVW VEKHKKG+YTSIIHGKYSHEET+ATASF
Sbjct: 105 FGAAVDEMLTLSNKNVQIVDTTCPWVSKVWNIVEKHKKGEYTSIIHGKYSHEETIATASF 164
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKYIIVKNM EA YVCDYILGGEL+GSSST+E F EKFK A+S+GFDPD+DL KVGIAN
Sbjct: 165 AGKYIIVKNMAEAMYVCDYILGGELDGSSSTREEFFEKFKFAISEGFDPDIDLSKVGIAN 224
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETEEIGKLVE+TMMRK+GVENVN HFISFNTICDATQERQDAMYK+VEEK+D+
Sbjct: 225 QTTMLKGETEEIGKLVERTMMRKYGVENVNNHFISFNTICDATQERQDAMYKLVEEKLDV 284
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
+LVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGN+I++KLMHGELVEKENWLP+G
Sbjct: 285 MLVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNRISHKLMHGELVEKENWLPEG 344
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 339
ITIG+TSGASTPDK VEDVL KVF+IKREEALQLA
Sbjct: 345 PITIGVTSGASTPDKVVEDVLIKVFDIKREEALQLA 380
>gi|91255003|gb|ABB88836.2| IPP/DMAPP synthase [Stevia rebaudiana]
Length = 458
Score = 614 bits (1583), Expect = e-173, Method: Compositional matrix adjust.
Identities = 289/336 (86%), Positives = 318/336 (94%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFP+EKIWITNEIIHNPTVNKRLEEM V++IPV++G+KQFDV++KGDVV+LPA
Sbjct: 123 IAYEARKQFPDEKIWITNEIIHNPTVNKRLEEMEVKDIPVKDGEKQFDVIDKGDVVILPA 182
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGAAV EM+TL++K VQIVDTTCPWVSKVWTSVEKHKKG YTSIIHGKYSHEETVATASF
Sbjct: 183 FGAAVNEMLTLSDKQVQIVDTTCPWVSKVWTSVEKHKKGAYTSIIHGKYSHEETVATASF 242
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKY+IVKNM EA YVCDYILGG+LNGSSSTKEAFLEKFK AVS GFDPD DLVK G+AN
Sbjct: 243 AGKYVIVKNMDEATYVCDYILGGKLNGSSSTKEAFLEKFKYAVSNGFDPDTDLVKTGVAN 302
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETEEIGKLVE+TMM K+GVEN EHFISFNTICDATQERQDAMYK+V+EK+DL
Sbjct: 303 QTTMLKGETEEIGKLVERTMMSKYGVENATEHFISFNTICDATQERQDAMYKLVDEKMDL 362
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
+LVVGGWNSSNTSHLQEI E+RGIPSYWID+ +R+GPGN+IAYK MHGELVEKENWLPKG
Sbjct: 363 MLVVGGWNSSNTSHLQEIPEERGIPSYWIDTVERVGPGNRIAYKTMHGELVEKENWLPKG 422
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 339
+TIGITSGASTPDKAVEDVLK+VFEIKREE+LQ A
Sbjct: 423 PLTIGITSGASTPDKAVEDVLKRVFEIKREESLQFA 458
>gi|449438464|ref|XP_004137008.1| PREDICTED: LOW QUALITY PROTEIN: 4-hydroxy-3-methylbut-2-enyl
diphosphate reductase, chloroplastic-like [Cucumis
sativus]
Length = 463
Score = 614 bits (1583), Expect = e-173, Method: Compositional matrix adjust.
Identities = 290/336 (86%), Positives = 318/336 (94%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFP+EKIW+TNEIIHNPTVNKRLEEM VQNIP+E+G+KQF+VV+KGDVV+LPA
Sbjct: 128 IAYEARKQFPDEKIWLTNEIIHNPTVNKRLEEMEVQNIPLEDGRKQFEVVDKGDVVILPA 187
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGAAV+EM+TL+ K VQIVDTTCPWVSKVW V+KHKKGDYTSIIHGKY+HEETVATASF
Sbjct: 188 FGAAVDEMLTLSEKKVQIVDTTCPWVSKVWNVVDKHKKGDYTSIIHGKYAHEETVATASF 247
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG +IIVKNM EA YVCDYILGGEL+GSSSTKE F++KFK AVSKGFDPDVDL+KVGIAN
Sbjct: 248 AGTFIIVKNMAEAIYVCDYILGGELDGSSSTKEEFMKKFKNAVSKGFDPDVDLLKVGIAN 307
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETEEIGKLVE+TMMRK GVENVNEHF+SFNTICDATQERQDAMYK+VE K+DL
Sbjct: 308 QTTMLKGETEEIGKLVERTMMRKHGVENVNEHFLSFNTICDATQERQDAMYKLVEGKLDL 367
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
+LVVGGWNSSNTSHLQEIAE+RGIPSYWIDSE+RIGPGN+IAYKL HGELVEKENWLPKG
Sbjct: 368 MLVVGGWNSSNTSHLQEIAEERGIPSYWIDSEQRIGPGNRIAYKLNHGELVEKENWLPKG 427
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 339
ITIG+TSGASTPDK VED L KVF+IKREEALQ A
Sbjct: 428 HITIGVTSGASTPDKVVEDALIKVFDIKREEALQFA 463
>gi|449506403|ref|XP_004162740.1| PREDICTED: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase,
chloroplastic-like [Cucumis sativus]
Length = 468
Score = 613 bits (1582), Expect = e-173, Method: Compositional matrix adjust.
Identities = 290/336 (86%), Positives = 318/336 (94%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFP+EKIW+TNEIIHNPTVNKRLEEM VQNIP+E+G+KQF+VV+KGDVV+LPA
Sbjct: 133 IAYEARKQFPDEKIWLTNEIIHNPTVNKRLEEMEVQNIPLEDGRKQFEVVDKGDVVILPA 192
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGAAV+EM+TL+ K VQIVDTTCPWVSKVW V+KHKKGDYTSIIHGKY+HEETVATASF
Sbjct: 193 FGAAVDEMLTLSEKKVQIVDTTCPWVSKVWNVVDKHKKGDYTSIIHGKYAHEETVATASF 252
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG +IIVKNM EA YVCDYILGGEL+GSSSTKE F++KFK AVSKGFDPDVDL+KVGIAN
Sbjct: 253 AGTFIIVKNMAEAIYVCDYILGGELDGSSSTKEEFMKKFKNAVSKGFDPDVDLLKVGIAN 312
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETEEIGKLVE+TMMRK GVENVNEHF+SFNTICDATQERQDAMYK+VE K+DL
Sbjct: 313 QTTMLKGETEEIGKLVERTMMRKHGVENVNEHFLSFNTICDATQERQDAMYKLVEGKLDL 372
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
+LVVGGWNSSNTSHLQEIAE+RGIPSYWIDSE+RIGPGN+IAYKL HGELVEKENWLPKG
Sbjct: 373 MLVVGGWNSSNTSHLQEIAEERGIPSYWIDSEQRIGPGNRIAYKLNHGELVEKENWLPKG 432
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 339
ITIG+TSGASTPDK VED L KVF+IKREEALQ A
Sbjct: 433 HITIGVTSGASTPDKVVEDALIKVFDIKREEALQFA 468
>gi|157849590|gb|ABV89582.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Rauvolfia
verticillata]
Length = 462
Score = 610 bits (1573), Expect = e-172, Method: Compositional matrix adjust.
Identities = 282/336 (83%), Positives = 323/336 (96%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFP E+IW+TNEIIHNPTVN+RLEEM V+ IP+++G+KQFDVV++GDVV+LPA
Sbjct: 127 IAYEARKQFPTERIWLTNEIIHNPTVNERLEEMKVKEIPLDDGEKQFDVVDQGDVVILPA 186
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA V+EM+TL+NKNVQIVDTTCPWV KVW SVEKHKKGDYTSIIHGKYSHEET+AT+SF
Sbjct: 187 FGAGVDEMLTLSNKNVQIVDTTCPWVVKVWNSVEKHKKGDYTSIIHGKYSHEETIATSSF 246
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKYIIVKNMKEA YVCDYILGG+L+GSSSTKEAF+EKFK AVSKGFDPD DL+KVGIAN
Sbjct: 247 AGKYIIVKNMKEAIYVCDYILGGQLDGSSSTKEAFMEKFKNAVSKGFDPDNDLLKVGIAN 306
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETEEIGKL+E+TMMRK+GV+N+N+HF+SFNTICDATQERQDAMYK+V++ VDL
Sbjct: 307 QTTMLKGETEEIGKLIERTMMRKYGVQNINDHFMSFNTICDATQERQDAMYKLVDQSVDL 366
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
+LV+GGWNSSNTSHLQEIAE+RGIPSYWIDSE+RIGPGN+I+YKL+HGELVEKEN+LP+G
Sbjct: 367 MLVIGGWNSSNTSHLQEIAEERGIPSYWIDSEERIGPGNRISYKLLHGELVEKENFLPEG 426
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 339
ITIG+TSGASTPDK VEDVL KVF+IKREEALQLA
Sbjct: 427 PITIGVTSGASTPDKVVEDVLVKVFDIKREEALQLA 462
>gi|388494250|gb|AFK35191.1| unknown [Lotus japonicus]
Length = 453
Score = 610 bits (1572), Expect = e-172, Method: Compositional matrix adjust.
Identities = 289/336 (86%), Positives = 315/336 (93%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFP+EKIW+TNEIIHNPTVNKRLE+M VQNIP+E+GKKQFDVVNKGDVV+ PA
Sbjct: 118 IAYEARKQFPDEKIWLTNEIIHNPTVNKRLEDMQVQNIPLEDGKKQFDVVNKGDVVMFPA 177
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA V+EM+ L+ KNVQIVDTTCPWVSKVW +VEKHKKGDYTSIIHGKY+HEET+ATASF
Sbjct: 178 FGAGVDEMLALSEKNVQIVDTTCPWVSKVWNTVEKHKKGDYTSIIHGKYAHEETIATASF 237
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
A KYIIVKNM EAEYVCDYILGGELNGSSSTKEA LEKFK AVSKGFDPD DLVK+GI N
Sbjct: 238 AAKYIIVKNMAEAEYVCDYILGGELNGSSSTKEALLEKFKFAVSKGFDPDTDLVKLGIVN 297
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETE+IGKLVE+TMMRKFGVENVNEHFISFNTICDATQE QD MYK+VE +D
Sbjct: 298 QTTMLKGETEDIGKLVERTMMRKFGVENVNEHFISFNTICDATQEIQDTMYKLVERDMDP 357
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
+LVVGGWNSSNTSHLQEIAE+R IPSYWID+E+RIGPGN+IAYKLMHGELVEKEN+LP+G
Sbjct: 358 MLVVGGWNSSNTSHLQEIAEERRIPSYWIDTEQRIGPGNRIAYKLMHGELVEKENFLPQG 417
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 339
ITIGITSGASTPDK VEDVL KVF++KREEALQLA
Sbjct: 418 PITIGITSGASTPDKVVEDVLIKVFDLKREEALQLA 453
>gi|115455133|ref|NP_001051167.1| Os03g0731900 [Oryza sativa Japonica Group]
gi|75254572|sp|Q6AVG6.1|ISPH_ORYSJ RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase,
chloroplastic; Flags: Precursor
gi|50540738|gb|AAT77894.1| putative LytB protein [Oryza sativa Japonica Group]
gi|108710907|gb|ABF98702.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, putative,
expressed [Oryza sativa Japonica Group]
gi|113549638|dbj|BAF13081.1| Os03g0731900 [Oryza sativa Japonica Group]
gi|215694051|dbj|BAG89250.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768321|dbj|BAH00550.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 459
Score = 607 bits (1565), Expect = e-171, Method: Compositional matrix adjust.
Identities = 289/336 (86%), Positives = 311/336 (92%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFP+++IW+TNEIIHNPTVNKRLE+M VQNIPV+ G K FDVV +GDVVVLPA
Sbjct: 124 IAYEARKQFPDDRIWLTNEIIHNPTVNKRLEDMGVQNIPVDAGIKDFDVVEQGDVVVLPA 183
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGAAVEEM TLN K VQIVDTTCPWVSKVW VEKHKKGDYTSIIHGKYSHEETVATASF
Sbjct: 184 FGAAVEEMYTLNEKKVQIVDTTCPWVSKVWNMVEKHKKGDYTSIIHGKYSHEETVATASF 243
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG YIIVKN+ EA YVCDYILGG+L+GSSSTKE FLEKFK AVS GFDPDVDLVKVGIAN
Sbjct: 244 AGTYIIVKNIAEASYVCDYILGGQLDGSSSTKEEFLEKFKNAVSPGFDPDVDLVKVGIAN 303
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETEEIGKLVEKTMMR+FGVENVN+HFI+FNTICDATQERQDAMY++V+EKVDL
Sbjct: 304 QTTMLKGETEEIGKLVEKTMMRRFGVENVNDHFIAFNTICDATQERQDAMYQLVKEKVDL 363
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
ILVVGGWNSSNTSHLQEI E GIPSYWIDSE+RIGPGNKI+YKL HGELVEKENWLP+G
Sbjct: 364 ILVVGGWNSSNTSHLQEIGELSGIPSYWIDSEQRIGPGNKISYKLNHGELVEKENWLPEG 423
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 339
ITIG+TSGASTPDK VED L+KVFEIKR+E LQ A
Sbjct: 424 PITIGVTSGASTPDKVVEDALQKVFEIKRQEVLQAA 459
>gi|113170997|gb|ABI30631.1| 1-hydroxy-2-methyl-butenyl 4-diphosphate reductase [Catharanthus
roseus]
Length = 462
Score = 607 bits (1564), Expect = e-171, Method: Compositional matrix adjust.
Identities = 281/336 (83%), Positives = 319/336 (94%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFP E++W+TNEIIHNPTVN+RLEEM VQ IP+E+GKKQFDVV+KGDVV+LPA
Sbjct: 127 IAYEARKQFPTERLWLTNEIIHNPTVNQRLEEMKVQEIPIEDGKKQFDVVDKGDVVILPA 186
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA V+EM+T+++KNVQIVDTTCPWV KVW VEKHKKG+YTS+IHGKY HEET+ATASF
Sbjct: 187 FGAGVDEMLTVSDKNVQIVDTTCPWVVKVWNVVEKHKKGEYTSVIHGKYGHEETIATASF 246
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKYIIVKNMKEA YVC YILGG+L+GSSST+EAF+EKFK AVS+GFDPD DL+KVGIAN
Sbjct: 247 AGKYIIVKNMKEATYVCGYILGGQLDGSSSTREAFMEKFKNAVSEGFDPDEDLIKVGIAN 306
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETEEIGKL+E+TMMRK+GV+NVN+HF+SFNT CDATQERQDAMYK+V+E +DL
Sbjct: 307 QTTMLKGETEEIGKLIERTMMRKYGVQNVNDHFMSFNTFCDATQERQDAMYKLVDEPLDL 366
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
+LVVGGWNSSNTSHLQEIAE+RGIPSYWIDSEKRIGPGNKI+YKLMHGELVEKEN+LP+G
Sbjct: 367 MLVVGGWNSSNTSHLQEIAEERGIPSYWIDSEKRIGPGNKISYKLMHGELVEKENFLPEG 426
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 339
ITIG+TSGASTPDK VEDVL KVF+IKREEALQLA
Sbjct: 427 PITIGVTSGASTPDKVVEDVLVKVFDIKREEALQLA 462
>gi|124054083|gb|ABM89226.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Picrorhiza
kurrooa]
Length = 462
Score = 606 bits (1563), Expect = e-171, Method: Compositional matrix adjust.
Identities = 286/336 (85%), Positives = 317/336 (94%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFP E IWITNEIIHNPTVN+RLE+M V+NIP++ G+KQFDV+NKGDVVVLPA
Sbjct: 127 IAYEARKQFPTENIWITNEIIHNPTVNQRLEDMDVKNIPLDNGQKQFDVINKGDVVVLPA 186
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGAAV+EM+TL+ KNVQIVDTTCPWVSKVW SVEKHKKG++TSIIHGKYSHEET+ATASF
Sbjct: 187 FGAAVDEMLTLSEKNVQIVDTTCPWVSKVWNSVEKHKKGEHTSIIHGKYSHEETMATASF 246
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKYI+VKNM EA YV DYILGG+L+GSSSTKEAFLEKFK A+SKGFDPD DLVKVGIAN
Sbjct: 247 AGKYIVVKNMAEATYVRDYILGGKLDGSSSTKEAFLEKFKYALSKGFDPDTDLVKVGIAN 306
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETE IGKL E+TMM+K+GVENVN HF+SFNTICDATQERQDAMYK+V+EKVDL
Sbjct: 307 QTTMLKGETEAIGKLAERTMMQKYGVENVNNHFMSFNTICDATQERQDAMYKLVDEKVDL 366
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
I+VVGGWNSSNTSHLQEIAEDRGIPSYW+DS+ RIGPGNKI+ KLMHGELVEKENWLP+G
Sbjct: 367 IIVVGGWNSSNTSHLQEIAEDRGIPSYWVDSDVRIGPGNKISCKLMHGELVEKENWLPEG 426
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 339
ITIG+TSGASTPDKAVEDVL K+F+IKREE LQLA
Sbjct: 427 PITIGVTSGASTPDKAVEDVLTKIFDIKREELLQLA 462
>gi|218193698|gb|EEC76125.1| hypothetical protein OsI_13396 [Oryza sativa Indica Group]
Length = 459
Score = 606 bits (1562), Expect = e-171, Method: Compositional matrix adjust.
Identities = 288/336 (85%), Positives = 311/336 (92%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFP+++IW+TNEIIHNPTVNKRLE+M VQNIPV+ G K FDVV +GDVVVLPA
Sbjct: 124 IAYEARKQFPDDRIWLTNEIIHNPTVNKRLEDMGVQNIPVDAGIKDFDVVEQGDVVVLPA 183
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGAAVEEM TLN K VQIVDTTCPWVSKVW VEKHKKGDYTSIIHGKYSHEETVATASF
Sbjct: 184 FGAAVEEMYTLNEKKVQIVDTTCPWVSKVWNMVEKHKKGDYTSIIHGKYSHEETVATASF 243
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG YIIVKN+ EA YVCDYILGG+L+GSSSTKE FLEKFK AVS GFDPDVDLVKVGIAN
Sbjct: 244 AGTYIIVKNIAEASYVCDYILGGQLDGSSSTKEEFLEKFKNAVSPGFDPDVDLVKVGIAN 303
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETEEIGKLVEKTMMR+FGVENVN+HFI+FNTICDATQERQDAMY++V+EKVDL
Sbjct: 304 QTTMLKGETEEIGKLVEKTMMRRFGVENVNDHFIAFNTICDATQERQDAMYQLVKEKVDL 363
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
ILV+GGWNSSNTSHLQEI E GIPSYWIDSE+RIGPGNKI+YKL HGELVEKENWLP+G
Sbjct: 364 ILVIGGWNSSNTSHLQEIGELSGIPSYWIDSEQRIGPGNKISYKLNHGELVEKENWLPEG 423
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 339
ITIG+TSGASTPDK VED L+KVFEIKR+E LQ A
Sbjct: 424 PITIGVTSGASTPDKVVEDALQKVFEIKRQEVLQAA 459
>gi|125587813|gb|EAZ28477.1| hypothetical protein OsJ_12459 [Oryza sativa Japonica Group]
Length = 599
Score = 605 bits (1561), Expect = e-171, Method: Compositional matrix adjust.
Identities = 289/336 (86%), Positives = 311/336 (92%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFP+++IW+TNEIIHNPTVNKRLE+M VQNIPV+ G K FDVV +GDVVVLPA
Sbjct: 264 IAYEARKQFPDDRIWLTNEIIHNPTVNKRLEDMGVQNIPVDAGIKDFDVVEQGDVVVLPA 323
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGAAVEEM TLN K VQIVDTTCPWVSKVW VEKHKKGDYTSIIHGKYSHEETVATASF
Sbjct: 324 FGAAVEEMYTLNEKKVQIVDTTCPWVSKVWNMVEKHKKGDYTSIIHGKYSHEETVATASF 383
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG YIIVKN+ EA YVCDYILGG+L+GSSSTKE FLEKFK AVS GFDPDVDLVKVGIAN
Sbjct: 384 AGTYIIVKNIAEASYVCDYILGGQLDGSSSTKEEFLEKFKNAVSPGFDPDVDLVKVGIAN 443
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETEEIGKLVEKTMMR+FGVENVN+HFI+FNTICDATQERQDAMY++V+EKVDL
Sbjct: 444 QTTMLKGETEEIGKLVEKTMMRRFGVENVNDHFIAFNTICDATQERQDAMYQLVKEKVDL 503
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
ILVVGGWNSSNTSHLQEI E GIPSYWIDSE+RIGPGNKI+YKL HGELVEKENWLP+G
Sbjct: 504 ILVVGGWNSSNTSHLQEIGELSGIPSYWIDSEQRIGPGNKISYKLNHGELVEKENWLPEG 563
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 339
ITIG+TSGASTPDK VED L+KVFEIKR+E LQ A
Sbjct: 564 PITIGVTSGASTPDKVVEDALQKVFEIKRQEVLQAA 599
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 69/88 (78%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AY+AR +FP+ ++W+TN+IIHNPTV++RL+EM ++ IPV G K VV GDVV+ PA
Sbjct: 143 LAYDARVKFPDRRLWLTNQIIHNPTVSERLDEMGIKIIPVVSGVKDLSVVEDGDVVIFPA 202
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSK 91
FG V+EMVTLN KNV IVDTTCP V K
Sbjct: 203 FGFTVDEMVTLNRKNVHIVDTTCPLVLK 230
>gi|325557690|gb|ADZ29096.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase [Ipomoea
batatas]
Length = 461
Score = 605 bits (1560), Expect = e-171, Method: Compositional matrix adjust.
Identities = 287/336 (85%), Positives = 314/336 (93%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFP E IW+T EIIHNPTVNKRLE+M V+NIPV EG K FDVVNKGD VVLPA
Sbjct: 126 IAYEARKQFPTENIWLTPEIIHNPTVNKRLEDMDVKNIPVNEGNKIFDVVNKGDGVVLPA 185
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA V+EM+TL+ KNVQIVDTTCPWVSKVW +VEKHKKG+YTSIIHGKYSHEETVATASF
Sbjct: 186 FGAGVDEMLTLSEKNVQIVDTTCPWVSKVWNTVEKHKKGEYTSIIHGKYSHEETVATASF 245
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKYIIVKNM EA YVCDYILGG+L+GS STKEAFLEKFK AVSKGFDPD DL KVGIAN
Sbjct: 246 AGKYIIVKNMAEATYVCDYILGGQLDGSRSTKEAFLEKFKCAVSKGFDPDSDLTKVGIAN 305
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETEEIGKLVE+TMMRK+GVENVN HFISFNTICDATQERQDAMYK+VEE++DL
Sbjct: 306 QTTMLKGETEEIGKLVERTMMRKYGVENVNNHFISFNTICDATQERQDAMYKLVEEQLDL 365
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
+LV+GGWNSSNTSHLQEIAE+RGIPSYWIDSE+R+GPGNKI+YKLMHGELVEKEN+LPKG
Sbjct: 366 MLVIGGWNSSNTSHLQEIAEERGIPSYWIDSEQRVGPGNKISYKLMHGELVEKENFLPKG 425
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 339
I IG+TSGASTPDK VED+L KVF+IKREEALQ++
Sbjct: 426 PIKIGVTSGASTPDKVVEDILVKVFDIKREEALQIS 461
>gi|10716963|gb|AAG21984.1|AF270978_1 LYTB-like protein precursor [Adonis aestivalis var. palaestina]
Length = 464
Score = 604 bits (1557), Expect = e-170, Method: Compositional matrix adjust.
Identities = 286/336 (85%), Positives = 313/336 (93%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFP+EKIWITNEIIHNPTVNKRLEEM V+ IPV +GKK FDVV KGDVV+LPA
Sbjct: 129 IAYEARKQFPDEKIWITNEIIHNPTVNKRLEEMEVKEIPVGDGKKHFDVVAKGDVVILPA 188
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGAAV EM+TL+ KNVQIVDTTCPWVSKVW SVEKHKKG+YTSIIHGKYSHEET+ATASF
Sbjct: 189 FGAAVSEMLTLSEKNVQIVDTTCPWVSKVWNSVEKHKKGEYTSIIHGKYSHEETIATASF 248
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKYIIVKNM EA YVCDYILGGELNGSSS K+A LEKFK A+S+GFDPD DL+K GIAN
Sbjct: 249 AGKYIIVKNMDEAMYVCDYILGGELNGSSSDKQALLEKFKYAISEGFDPDTDLIKTGIAN 308
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETE+IGKL+EKTMMRK+GVEN+N+HFISFNTICDATQERQDAM+K+VEEKVDL
Sbjct: 309 QTTMLKGETEDIGKLLEKTMMRKYGVENINDHFISFNTICDATQERQDAMFKLVEEKVDL 368
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
ILVVGGWNSSNTSHLQEI+E RGIPSYWIDSE RIGPGNKI++KL HGELVE ENWLP+G
Sbjct: 369 ILVVGGWNSSNTSHLQEISELRGIPSYWIDSETRIGPGNKISHKLNHGELVETENWLPEG 428
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 339
+TIG+TSGASTPDKAVED L KVF+IKRE+ LQLA
Sbjct: 429 PVTIGVTSGASTPDKAVEDALVKVFDIKREQLLQLA 464
>gi|402770459|gb|AFQ98369.1| hydroxymethylbutenyl diphosphate reductase [Camellia sinensis]
Length = 459
Score = 603 bits (1554), Expect = e-170, Method: Compositional matrix adjust.
Identities = 296/336 (88%), Positives = 322/336 (95%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFP+EKIWITNEIIHNPTVNKRLEEM VQNIP+++GKKQFDVV+K VVVLPA
Sbjct: 124 IAYEARKQFPQEKIWITNEIIHNPTVNKRLEEMDVQNIPIKDGKKQFDVVDKDHVVVLPA 183
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGAAV+EM+ LN+KNVQIVDTTCPWVSKVW +VEKHKKG+YTSIIHGKYSHEETVATASF
Sbjct: 184 FGAAVDEMLVLNDKNVQIVDTTCPWVSKVWNTVEKHKKGEYTSIIHGKYSHEETVATASF 243
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKYIIVKNM EA YVCDYILGGEL+GSSSTKEAFLEKFK AVSKGFDPD DLVKVGIAN
Sbjct: 244 AGKYIIVKNMAEATYVCDYILGGELDGSSSTKEAFLEKFKFAVSKGFDPDSDLVKVGIAN 303
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETEEIGKL E+TMMRKFGVEN+NEHFISFNTICDATQERQDAMYK+VEE++DL
Sbjct: 304 QTTMLKGETEEIGKLAERTMMRKFGVENLNEHFISFNTICDATQERQDAMYKLVEEQLDL 363
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
+LVVGGWNSSNTSHLQEI+E+RGIPSYWIDSE+RIGPGNKI++KLMHGELVEKEN+LP+G
Sbjct: 364 MLVVGGWNSSNTSHLQEISEERGIPSYWIDSEQRIGPGNKISHKLMHGELVEKENFLPEG 423
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 339
ITIG+TSGAST DK VEDVL KVF+IKREEALQLA
Sbjct: 424 PITIGVTSGASTLDKVVEDVLIKVFDIKREEALQLA 459
>gi|306029974|gb|ADM83430.1| 1-hydroxy-2-methyl-butenyl 4-diphosphate reductase [Nicotiana
benthamiana]
Length = 461
Score = 600 bits (1547), Expect = e-169, Method: Compositional matrix adjust.
Identities = 289/336 (86%), Positives = 322/336 (95%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFP E++WITNEIIHNPTVNKRLEEM V+NIP+EEGKK FDVV+K DVVVLPA
Sbjct: 126 IAYEARKQFPTERLWITNEIIHNPTVNKRLEEMEVKNIPIEEGKKNFDVVDKDDVVVLPA 185
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGAAV+EM+ L++KNVQIVDTTCPWV+KVW +VEKHKKGDYTSIIHGKYSHEETVATASF
Sbjct: 186 FGAAVDEMLVLSDKNVQIVDTTCPWVTKVWNTVEKHKKGDYTSIIHGKYSHEETVATASF 245
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKYIIVKNM EA YVCDYILGG+L+GSSSTKEAF++KFK AVSKGFDPDVDLVK GIAN
Sbjct: 246 AGKYIIVKNMAEATYVCDYILGGKLDGSSSTKEAFMQKFKNAVSKGFDPDVDLVKTGIAN 305
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETEEIGKLVE+TMM+++GVEN+N HFISFNTICDATQERQDAMYK+V+EK+DL
Sbjct: 306 QTTMLKGETEEIGKLVERTMMQRYGVENINNHFISFNTICDATQERQDAMYKLVDEKLDL 365
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
+LVVGGWNSSNTSHLQEIAE+RGIPSYWIDSE+RIGPGN+I+YKL+HGELVEKEN+LP+G
Sbjct: 366 MLVVGGWNSSNTSHLQEIAEERGIPSYWIDSEQRIGPGNRISYKLLHGELVEKENFLPEG 425
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 339
IT+G+TSGASTPDKAVEDVL KVF IKREEALQLA
Sbjct: 426 PITVGVTSGASTPDKAVEDVLIKVFNIKREEALQLA 461
>gi|326494910|dbj|BAJ85550.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 464
Score = 598 bits (1543), Expect = e-168, Method: Compositional matrix adjust.
Identities = 284/336 (84%), Positives = 309/336 (91%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFPEE+IWITNEIIHNPTVNK+LE+M V++IPV G K FDV+ +GDVVVLPA
Sbjct: 129 IAYEARKQFPEERIWITNEIIHNPTVNKKLEDMGVKDIPVNAGIKDFDVIEQGDVVVLPA 188
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGAAV+EM TLN KNVQIVDTTCPWVSKVW VEKHKKGDYTSIIHGKY+HEETVATASF
Sbjct: 189 FGAAVDEMYTLNQKNVQIVDTTCPWVSKVWNMVEKHKKGDYTSIIHGKYAHEETVATASF 248
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKYIIVKNM EA YVCDYILGG+L+GSS+T+E FLEKFKKAVS GFDPDVDL KVGIAN
Sbjct: 249 AGKYIIVKNMVEATYVCDYILGGQLDGSSATREEFLEKFKKAVSPGFDPDVDLEKVGIAN 308
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETEEIGKLVEKTMMRKFGVEN NEHF++FNTICDATQERQDAMY +V+EKVDL
Sbjct: 309 QTTMLKGETEEIGKLVEKTMMRKFGVENANEHFVAFNTICDATQERQDAMYHLVKEKVDL 368
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
ILV+GGWNSSNTSHLQEI E GIPSYWIDSE+RIGPGN+IAYKL HGEL+E ENWLP+G
Sbjct: 369 ILVIGGWNSSNTSHLQEIGELSGIPSYWIDSEQRIGPGNRIAYKLNHGELIEAENWLPEG 428
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 339
ITIG+TSGASTPDK VED L KVFEIKR+E LQ+A
Sbjct: 429 PITIGVTSGASTPDKVVEDTLHKVFEIKRQEVLQVA 464
>gi|357116851|ref|XP_003560190.1| PREDICTED: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase-like
[Brachypodium distachyon]
Length = 465
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 283/336 (84%), Positives = 310/336 (92%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFPEE+IW+TNEIIHNPTVNKRLE+M V++IP+ G K FDV+ +GDVVVLPA
Sbjct: 130 IAYEARKQFPEERIWLTNEIIHNPTVNKRLEDMGVKDIPINAGIKDFDVIEQGDVVVLPA 189
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGAAVEEM TLN KNVQIVDTTCPWVSKVW VEKHKKGDYTSIIHGKY+HEETVATASF
Sbjct: 190 FGAAVEEMYTLNEKNVQIVDTTCPWVSKVWNMVEKHKKGDYTSIIHGKYAHEETVATASF 249
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKYIIVKNM EA YVCDYILGG+L+GSSST+E FLEKFKKAVS GFDPDVDL KVGIAN
Sbjct: 250 AGKYIIVKNMVEAMYVCDYILGGQLDGSSSTREEFLEKFKKAVSPGFDPDVDLEKVGIAN 309
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETEEIGKLVEKTMMRKFGVEN NEHF++FNTICDATQERQDAMY++V++KVDL
Sbjct: 310 QTTMLKGETEEIGKLVEKTMMRKFGVENANEHFVAFNTICDATQERQDAMYQLVKDKVDL 369
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
ILV+GGWNSSNTSHLQEI E GIPSYWIDSE+RIGPGN+I+YKL HGEL+E ENWLP+G
Sbjct: 370 ILVIGGWNSSNTSHLQEIGELSGIPSYWIDSEQRIGPGNRISYKLNHGELIETENWLPEG 429
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 339
ITIG+TSGASTPDK VED L KVFEIKR+E LQ+A
Sbjct: 430 PITIGVTSGASTPDKVVEDALHKVFEIKRQEILQVA 465
>gi|289157416|gb|ADC84348.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase [Artemisia
annua]
Length = 455
Score = 597 bits (1539), Expect = e-168, Method: Compositional matrix adjust.
Identities = 279/335 (83%), Positives = 316/335 (94%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFP++KIWITN+IIHNPTVNKRLEEM V +IP++ G+KQFDVV+KGDVV+LPA
Sbjct: 120 IAYEARKQFPDDKIWITNQIIHNPTVNKRLEEMEVTDIPIDGGEKQFDVVDKGDVVILPA 179
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGAAV+EM L+NK VQIVDTTCPWV+KVW VEKHKKGDYTS+IHGK++HEETVATASF
Sbjct: 180 FGAAVDEMRILSNKEVQIVDTTCPWVTKVWNVVEKHKKGDYTSVIHGKHNHEETVATASF 239
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGK+I+VKN+ EA YVCDYILGG+LNGSSSTKEAF+EKFK AVS+GFDPD DLVK GIAN
Sbjct: 240 AGKFIVVKNIDEATYVCDYILGGKLNGSSSTKEAFMEKFKSAVSEGFDPDKDLVKAGIAN 299
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETEEIGKL+E+TMM+K+GVENVN HF+SFNTICDATQERQDAMYK+V++KVDL
Sbjct: 300 QTTMLKGETEEIGKLLERTMMQKYGVENVNNHFLSFNTICDATQERQDAMYKLVDDKVDL 359
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
+LV+GG+NSSNTSHLQEIAE+R IPSYWIDSEKRIGPGN+IAYKL+HGELVE+ENWLPKG
Sbjct: 360 MLVIGGFNSSNTSHLQEIAEERKIPSYWIDSEKRIGPGNRIAYKLLHGELVEQENWLPKG 419
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQL 338
ITIG+TSGASTPDK VED L KVFEIKREEALQL
Sbjct: 420 PITIGVTSGASTPDKVVEDALLKVFEIKREEALQL 454
>gi|405789874|gb|AFS28680.1| putative 4-hydroxy-3-methylbut-2-enyl diphosphate reductase,
partial [Olea europaea]
Length = 371
Score = 597 bits (1538), Expect = e-168, Method: Compositional matrix adjust.
Identities = 280/320 (87%), Positives = 308/320 (96%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFP EKIWITNEIIHNPTVN+RL+EM V+N+PV++GKK FDVVNKGDVVVLPA
Sbjct: 52 IAYEARKQFPTEKIWITNEIIHNPTVNQRLDEMEVKNLPVKDGKKFFDVVNKGDVVVLPA 111
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGAAV+EM+ LN+KNVQIVDTTCPWVSKVWT+VEKHKKG+Y SIIHGKYSHEETVATASF
Sbjct: 112 FGAAVDEMLVLNDKNVQIVDTTCPWVSKVWTTVEKHKKGEYASIIHGKYSHEETVATASF 171
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKYIIVKNM EA YVCDYILGGEL+GSSSTKEAFLEKFK AVS+GFDPD DLVKVGIAN
Sbjct: 172 AGKYIIVKNMAEATYVCDYILGGELDGSSSTKEAFLEKFKYAVSEGFDPDTDLVKVGIAN 231
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETEEIGKLVE+++MRK+GVEN+N HFISFNTICDATQERQDAMYK+V+E++DL
Sbjct: 232 QTTMLKGETEEIGKLVERSLMRKYGVENINNHFISFNTICDATQERQDAMYKLVDEQMDL 291
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
+LVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGN+I+YKLMHGELVEKENWLP+G
Sbjct: 292 MLVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNRISYKLMHGELVEKENWLPEG 351
Query: 304 QITIGITSGASTPDKAVEDV 323
+TIG+TSGASTPDK VEDV
Sbjct: 352 PVTIGVTSGASTPDKVVEDV 371
>gi|157042741|gb|ABV02022.1| 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate reductase [Nicotiana
langsdorffii x Nicotiana sanderae]
Length = 461
Score = 595 bits (1534), Expect = e-168, Method: Compositional matrix adjust.
Identities = 286/336 (85%), Positives = 320/336 (95%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFP E++WITNEIIHNPTVNKRLEEM V+NIP+EEGKK FDVV+K DVVVLPA
Sbjct: 126 IAYEARKQFPTERLWITNEIIHNPTVNKRLEEMDVKNIPIEEGKKNFDVVDKDDVVVLPA 185
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGAAV+EM+ L++KNVQIVDTTCPWV+KVW +VEKHKKGDYTSIIHGKYSHEETVATASF
Sbjct: 186 FGAAVDEMLVLSDKNVQIVDTTCPWVTKVWNTVEKHKKGDYTSIIHGKYSHEETVATASF 245
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKYIIVKNM EA YVCDYILGG+L+GSSSTKEAF++KFK AVSKGFDPDVDLVK GIAN
Sbjct: 246 AGKYIIVKNMAEATYVCDYILGGKLDGSSSTKEAFMQKFKNAVSKGFDPDVDLVKTGIAN 305
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETEEIGK VE+TMM+++GVEN+N HFISFNTICDATQERQDAMYK+V++K+DL
Sbjct: 306 QTTMLKGETEEIGKSVERTMMQRYGVENINNHFISFNTICDATQERQDAMYKLVDQKLDL 365
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
+LVVGGWNSSNTSHLQEIAE+RGIPSYWIDSE+RIGPGN+I+YKL+HGELVEKEN+LP+G
Sbjct: 366 MLVVGGWNSSNTSHLQEIAEERGIPSYWIDSEQRIGPGNRISYKLLHGELVEKENFLPEG 425
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 339
IT+G+TSGASTPDK VEDVL KVF IKREEALQLA
Sbjct: 426 PITVGVTSGASTPDKVVEDVLIKVFNIKREEALQLA 461
>gi|164452988|gb|ABY57296.1| IPP/DMAPP synthase [Artemisia annua]
Length = 455
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 278/335 (82%), Positives = 316/335 (94%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFP++KIWITN+IIHNPTVNKRLEEM V +IP++ G+KQFDVV+KGDVV+LPA
Sbjct: 120 IAYEARKQFPDDKIWITNQIIHNPTVNKRLEEMEVTDIPIDGGEKQFDVVDKGDVVILPA 179
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGAAV+EM L++K VQIVDTTCPWV+KVW VEKHKKGDYTS+IHGK++HEETVATASF
Sbjct: 180 FGAAVDEMRILSDKEVQIVDTTCPWVTKVWNVVEKHKKGDYTSVIHGKHNHEETVATASF 239
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGK+I+VKNM EA YVCDYILGG+LNGSSSTKEAF+EKFK AVS+GFDPD DLVK GIAN
Sbjct: 240 AGKFIVVKNMDEATYVCDYILGGKLNGSSSTKEAFMEKFKYAVSEGFDPDKDLVKAGIAN 299
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETEEIGKL+E+TMM+K+GVE+VN HF+SFNTICDATQERQDAMYK+V++KVDL
Sbjct: 300 QTTMLKGETEEIGKLLERTMMQKYGVEDVNNHFLSFNTICDATQERQDAMYKLVDDKVDL 359
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
+LV+GG+NSSNTSHLQEIAE+R IPSYWIDSEKRIGPGN+IAYKL+HGELVE+ENWLPKG
Sbjct: 360 MLVIGGFNSSNTSHLQEIAEERKIPSYWIDSEKRIGPGNRIAYKLLHGELVEQENWLPKG 419
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQL 338
ITIG+TSGASTPDK VED L KVFEIKREEALQL
Sbjct: 420 PITIGVTSGASTPDKVVEDALLKVFEIKREEALQL 454
>gi|224077800|ref|XP_002305413.1| predicted protein [Populus trichocarpa]
gi|222848377|gb|EEE85924.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 594 bits (1532), Expect = e-167, Method: Compositional matrix adjust.
Identities = 284/336 (84%), Positives = 310/336 (92%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQF +EKIWITNEIIHNPTVNKRLEEM V+N+PVEEGKK+F+VVN GDVV+LPA
Sbjct: 125 IAYEARKQFRDEKIWITNEIIHNPTVNKRLEEMEVENLPVEEGKKRFEVVNGGDVVILPA 184
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGAAV+EM TL+NKN+QIVDTTCPWVSKVW +VEK KKGDYTSIIHGKY+HEETVATASF
Sbjct: 185 FGAAVDEMFTLSNKNIQIVDTTCPWVSKVWNAVEKQKKGDYTSIIHGKYAHEETVATASF 244
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKYI+VKNMKEA YVCDY+LGG LNGSSST+E FLEKFKKAVSKGFDPD LVKVGIAN
Sbjct: 245 AGKYIVVKNMKEAMYVCDYVLGGGLNGSSSTREEFLEKFKKAVSKGFDPDSYLVKVGIAN 304
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETEEIGKLVE+TMMRK+GVEN+N+HFISFNTICDATQ RQDAMY +VEEK+DL
Sbjct: 305 QTTMLKGETEEIGKLVERTMMRKYGVENINDHFISFNTICDATQVRQDAMYNLVEEKLDL 364
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
+LVVGGWNSSNTSHLQEIAE RGIPSYWIDSE+RIGPGN+IAYKL HGEL EKENWLP+G
Sbjct: 365 MLVVGGWNSSNTSHLQEIAELRGIPSYWIDSEQRIGPGNRIAYKLNHGELAEKENWLPEG 424
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 339
ITIG+TSGASTPDK V + L KV I EE LQLA
Sbjct: 425 PITIGVTSGASTPDKVVGEALVKVLGISGEEGLQLA 460
>gi|256032164|gb|AAD55762.2| chloroplast 1-hydroxy-2-methyl-butenyl 4-diphosphate reductase
[Nicotiana tabacum]
Length = 462
Score = 594 bits (1531), Expect = e-167, Method: Compositional matrix adjust.
Identities = 287/337 (85%), Positives = 322/337 (95%), Gaps = 1/337 (0%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFP E++WITNEIIHNPTVNKRLEEM V+NIP+EEGKK FDVV+K DVVVLPA
Sbjct: 126 IAYEARKQFPTERLWITNEIIHNPTVNKRLEEMMVKNIPIEEGKKNFDVVDKDDVVVLPA 185
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGAAV+EM+ L++KNVQIVDTTCPWV+KVW +VEKHKKGDYTSIIHGKYSHEETVATASF
Sbjct: 186 FGAAVDEMLVLSDKNVQIVDTTCPWVTKVWNTVEKHKKGDYTSIIHGKYSHEETVATASF 245
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKYIIVKNM EA YVCDYILGG+L+GSSSTKEAF++KFK AVSKGFDPDVDLVK GIAN
Sbjct: 246 AGKYIIVKNMAEATYVCDYILGGKLDGSSSTKEAFMQKFKNAVSKGFDPDVDLVKTGIAN 305
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETE+IGKLVE+TMM+++GVEN+N HFISFNTICDATQERQDAMYK+V++K+DL
Sbjct: 306 QTTMLKGETEDIGKLVERTMMQRYGVENINNHFISFNTICDATQERQDAMYKLVDQKLDL 365
Query: 244 ILVV-GGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPK 302
+LVV GGWNSSNTSHLQEIAE+RGIPSYWIDSE+RIGPGN+I+YKL+HGELVEKEN+LP+
Sbjct: 366 MLVVGGGWNSSNTSHLQEIAEERGIPSYWIDSEQRIGPGNRISYKLLHGELVEKENFLPE 425
Query: 303 GQITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 339
G IT+G+TSGASTPDKAVEDVL KVF IKREEALQLA
Sbjct: 426 GPITVGVTSGASTPDKAVEDVLIKVFNIKREEALQLA 462
>gi|350535845|ref|NP_001234728.1| ISPH protein [Solanum lycopersicum]
gi|262176919|gb|ACY27516.1| ISPH protein [Solanum lycopersicum]
Length = 461
Score = 592 bits (1527), Expect = e-167, Method: Compositional matrix adjust.
Identities = 285/336 (84%), Positives = 322/336 (95%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFP E+IWITNEIIHNPTVNKRLE+M V+NIP+EEGKK FDVV+K DVVVLPA
Sbjct: 126 IAYEARKQFPTERIWITNEIIHNPTVNKRLEDMDVKNIPLEEGKKNFDVVDKDDVVVLPA 185
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGAAV+EM+ L++KNVQIVDTTCPWV+KVW +VEKHKKG+YTSIIHGKY+HEETVATASF
Sbjct: 186 FGAAVDEMLVLSDKNVQIVDTTCPWVTKVWNTVEKHKKGEYTSIIHGKYAHEETVATASF 245
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKYIIVKNM EA YVCDYILGG+L+GSSSTKEAF++KFK AVS+GFDPDVDLVK GIAN
Sbjct: 246 AGKYIIVKNMAEATYVCDYILGGKLDGSSSTKEAFMQKFKYAVSEGFDPDVDLVKAGIAN 305
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETE+IGKLVE+TMM+K+GVENVN HF+SFNTICDATQERQDAMYK+VE+K+DL
Sbjct: 306 QTTMLKGETEDIGKLVERTMMQKYGVENVNNHFVSFNTICDATQERQDAMYKLVEQKLDL 365
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
+LV+GGWNSSNTSHLQEIAE+RGIPSYWIDSE+R+GPGNKI+YKLMHGELVEKEN+LP+G
Sbjct: 366 MLVIGGWNSSNTSHLQEIAEERGIPSYWIDSEQRVGPGNKISYKLMHGELVEKENFLPEG 425
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 339
IT+G+TSGASTPDK VEDVL KVF+IKREEALQLA
Sbjct: 426 PITVGVTSGASTPDKVVEDVLIKVFDIKREEALQLA 461
>gi|18418433|ref|NP_567965.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Arabidopsis
thaliana]
gi|75332071|sp|Q94B35.1|ISPH_ARATH RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase,
chloroplastic; AltName: Full=Protein CHLOROPLAST
BIOGENESIS 6; Flags: Precursor
gi|14596179|gb|AAK68817.1| putative protein [Arabidopsis thaliana]
gi|20148251|gb|AAM10016.1| putative protein [Arabidopsis thaliana]
gi|27368105|gb|AAN87171.1| ISPH [Arabidopsis thaliana]
gi|332660962|gb|AEE86362.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Arabidopsis
thaliana]
Length = 466
Score = 592 bits (1526), Expect = e-167, Method: Compositional matrix adjust.
Identities = 280/336 (83%), Positives = 312/336 (92%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFPEE++WITNEIIHNPTVNKRLE+M V+ IPVE+ KKQFDVV K DVV+LPA
Sbjct: 131 IAYEARKQFPEERLWITNEIIHNPTVNKRLEDMDVKIIPVEDSKKQFDVVEKDDVVILPA 190
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA V+EM LN+K VQIVDTTCPWV+KVW +VEKHKKG+YTS+IHGKY+HEET+ATASF
Sbjct: 191 FGAGVDEMYVLNDKKVQIVDTTCPWVTKVWNTVEKHKKGEYTSVIHGKYNHEETIATASF 250
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKYIIVKNMKEA YVCDYILGG+ +GSSSTKE F+EKFK A+SKGFDPD DLVKVGIAN
Sbjct: 251 AGKYIIVKNMKEANYVCDYILGGQYDGSSSTKEEFMEKFKYAISKGFDPDNDLVKVGIAN 310
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETEEIG+L+E TMMRK+GVENV+ HFISFNTICDATQERQDA+Y++VEEK+DL
Sbjct: 311 QTTMLKGETEEIGRLLETTMMRKYGVENVSGHFISFNTICDATQERQDAIYELVEEKIDL 370
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
+LVVGGWNSSNTSHLQEI+E RGIPSYWIDSEKRIGPGNKIAYKL +GELVEKEN+LPKG
Sbjct: 371 MLVVGGWNSSNTSHLQEISEARGIPSYWIDSEKRIGPGNKIAYKLHYGELVEKENFLPKG 430
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 339
ITIG+TSGASTPDK VED L KVF+IKREE LQLA
Sbjct: 431 PITIGVTSGASTPDKVVEDALVKVFDIKREELLQLA 466
>gi|297798476|ref|XP_002867122.1| hypothetical protein ARALYDRAFT_491231 [Arabidopsis lyrata subsp.
lyrata]
gi|297312958|gb|EFH43381.1| hypothetical protein ARALYDRAFT_491231 [Arabidopsis lyrata subsp.
lyrata]
Length = 466
Score = 591 bits (1524), Expect = e-166, Method: Compositional matrix adjust.
Identities = 281/336 (83%), Positives = 311/336 (92%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFPEE++WITNEIIHNPTVNKRL +M V+ IPVE+ KKQFDVV K DVV+LPA
Sbjct: 131 IAYEARKQFPEERLWITNEIIHNPTVNKRLADMDVKIIPVEDSKKQFDVVEKDDVVILPA 190
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA V+EM LN+K VQIVDTTCPWV+KVW +VEKHKKGDYTS+IHGKY+HEET+ATASF
Sbjct: 191 FGAGVDEMYVLNDKKVQIVDTTCPWVTKVWNTVEKHKKGDYTSVIHGKYNHEETIATASF 250
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKYIIVKNMKEA YVCDYILGG+ +GSSSTKE F+EKFK AVSKGFDPD DLVKVGIAN
Sbjct: 251 AGKYIIVKNMKEANYVCDYILGGQYDGSSSTKEEFMEKFKYAVSKGFDPDHDLVKVGIAN 310
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETEEIGKL+E+TMMRK+GVENV+ HFISFNTICDATQERQDA+Y++VEEK+DL
Sbjct: 311 QTTMLKGETEEIGKLLERTMMRKYGVENVSGHFISFNTICDATQERQDAIYELVEEKIDL 370
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
+LV+GGWNSSNTSHLQEIAE RGIPSYWIDSEKRIGPGNKIA KL +GELVEKEN+LPKG
Sbjct: 371 MLVIGGWNSSNTSHLQEIAEARGIPSYWIDSEKRIGPGNKIASKLHYGELVEKENFLPKG 430
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 339
ITIG+TSGASTPDK VED L KVF+IKREE LQLA
Sbjct: 431 PITIGVTSGASTPDKVVEDALVKVFDIKREELLQLA 466
>gi|222424827|dbj|BAH20366.1| AT4G34350 [Arabidopsis thaliana]
Length = 358
Score = 590 bits (1520), Expect = e-166, Method: Compositional matrix adjust.
Identities = 280/336 (83%), Positives = 312/336 (92%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFPEE++WITNEIIHNPTVNKRLE+M V+ IPVE+ KKQFDVV K DVV+LPA
Sbjct: 23 IAYEARKQFPEERLWITNEIIHNPTVNKRLEDMDVKIIPVEDSKKQFDVVEKDDVVILPA 82
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA V+EM LN+K VQIVDTTCPWV+KVW +VEKHKKG+YTS+IHGKY+HEET+ATASF
Sbjct: 83 FGAGVDEMYVLNDKKVQIVDTTCPWVTKVWNTVEKHKKGEYTSVIHGKYNHEETIATASF 142
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKYIIVKNMKEA YVCDYILGG+ +GSSSTKE F+EKFK A+SKGFDPD DLVKVGIAN
Sbjct: 143 AGKYIIVKNMKEANYVCDYILGGQYDGSSSTKEEFMEKFKYAISKGFDPDNDLVKVGIAN 202
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETEEIG+L+E TMMRK+GVENV+ HFISFNTICDATQERQDA+Y++VEEK+DL
Sbjct: 203 QTTMLKGETEEIGRLLETTMMRKYGVENVSGHFISFNTICDATQERQDAIYELVEEKIDL 262
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
+LVVGGWNSSNTSHLQEI+E RGIPSYWIDSEKRIGPGNKIAYKL +GELVEKEN+LPKG
Sbjct: 263 MLVVGGWNSSNTSHLQEISEARGIPSYWIDSEKRIGPGNKIAYKLHYGELVEKENFLPKG 322
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 339
ITIG+TSGASTPDK VED L KVF+IKREE LQLA
Sbjct: 323 PITIGVTSGASTPDKVVEDALVKVFDIKREELLQLA 358
>gi|405789872|gb|AFS28679.1| putative 4-hydroxy-3-methylbut-2-enyl diphosphate reductase,
partial [Olea europaea]
Length = 371
Score = 589 bits (1518), Expect = e-166, Method: Compositional matrix adjust.
Identities = 277/320 (86%), Positives = 305/320 (95%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFP EKIWITNEIIHNPTVN+RL+EM V+N+PV++GKK FDVVNKGDVVVLPA
Sbjct: 52 IAYEARKQFPTEKIWITNEIIHNPTVNQRLDEMEVKNLPVKDGKKFFDVVNKGDVVVLPA 111
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGAAV+EM+ LN+KNVQIVDTTCPWVSKVWT+VEKHKKG+Y SIIHGKYSHEETVATASF
Sbjct: 112 FGAAVDEMLVLNDKNVQIVDTTCPWVSKVWTTVEKHKKGEYASIIHGKYSHEETVATASF 171
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKYIIVKNM EA YVCDYILGGEL+GSSS KEAFLEKFK AVS+GFDPD DLVKVGIAN
Sbjct: 172 AGKYIIVKNMAEATYVCDYILGGELDGSSSXKEAFLEKFKYAVSEGFDPDTDLVKVGIAN 231
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETEEI KLVE+++MRK+GVEN+N HFISFNTICDATQERQDAMYK+V+E++DL
Sbjct: 232 QTTMLKGETEEIXKLVERSLMRKYGVENINNHFISFNTICDATQERQDAMYKLVDEQMDL 291
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
+LVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGN+I+YKLMHGELVEKENWLP+G
Sbjct: 292 MLVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNRISYKLMHGELVEKENWLPEG 351
Query: 304 QITIGITSGASTPDKAVEDV 323
+TIG+T GASTPDK VEDV
Sbjct: 352 PVTIGVTYGASTPDKVVEDV 371
>gi|242033077|ref|XP_002463933.1| hypothetical protein SORBIDRAFT_01g009140 [Sorghum bicolor]
gi|241917787|gb|EER90931.1| hypothetical protein SORBIDRAFT_01g009140 [Sorghum bicolor]
Length = 464
Score = 588 bits (1516), Expect = e-165, Method: Compositional matrix adjust.
Identities = 282/336 (83%), Positives = 308/336 (91%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFPEE+IW+TNEIIHNPTVNKRL+EM V IPV+ G K F+VV +GDVVVLPA
Sbjct: 129 IAYEARKQFPEERIWLTNEIIHNPTVNKRLDEMGVDIIPVDAGIKDFNVVEQGDVVVLPA 188
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGAAVEEM TLN K VQIVDTTCPWVSKVW VEKHKK +YTSIIHGKYSHEETVATASF
Sbjct: 189 FGAAVEEMYTLNEKKVQIVDTTCPWVSKVWNMVEKHKKSEYTSIIHGKYSHEETVATASF 248
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKYIIVKNM EA YVCDYILGG+L+GSSSTKE FLEKFKKAVS GFDPDVDL +GIAN
Sbjct: 249 AGKYIIVKNMAEATYVCDYILGGQLDGSSSTKEEFLEKFKKAVSPGFDPDVDLDMLGIAN 308
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETEEIGKLVEKTMM+K+GVENVN+HF++FNTICDATQERQDAMY++V+EKVDL
Sbjct: 309 QTTMLKGETEEIGKLVEKTMMQKYGVENVNDHFMAFNTICDATQERQDAMYQLVKEKVDL 368
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
ILV+GGWNSSNTSHLQEI E GIPSYWIDSE+RIGPGN I+YKL HGELVEKENWLP+G
Sbjct: 369 ILVIGGWNSSNTSHLQEIGELSGIPSYWIDSEQRIGPGNMISYKLNHGELVEKENWLPEG 428
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 339
ITIG+TSGASTPDK VED L+KVFEIKR+E LQ+A
Sbjct: 429 PITIGVTSGASTPDKVVEDALQKVFEIKRQEILQVA 464
>gi|293333839|ref|NP_001169300.1| uncharacterized protein LOC100383164 [Zea mays]
gi|224028507|gb|ACN33329.1| unknown [Zea mays]
gi|289470758|gb|ADC96733.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Zea mays]
gi|414872616|tpg|DAA51173.1| TPA: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Zea mays]
Length = 462
Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust.
Identities = 281/336 (83%), Positives = 308/336 (91%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFPEE+IW+TNEIIHNPTVNKRL+EM V+ IPV+ G K F+VV +GDVVVLPA
Sbjct: 127 IAYEARKQFPEERIWLTNEIIHNPTVNKRLDEMGVEIIPVDAGIKDFNVVEQGDVVVLPA 186
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGAAVEEM TLN K VQIVDTTCPWVSKVW VEKHKK +YTSIIHGKYSHEETVATASF
Sbjct: 187 FGAAVEEMYTLNEKKVQIVDTTCPWVSKVWNMVEKHKKSEYTSIIHGKYSHEETVATASF 246
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKYIIVKNM EA YVCDYILGG+L+GSSSTKE FLEKFKKAVS GFDPDV L VGIAN
Sbjct: 247 AGKYIIVKNMAEATYVCDYILGGQLDGSSSTKEEFLEKFKKAVSPGFDPDVHLDMVGIAN 306
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETEEIGKL+EKTMM+K+GVENVN+HF++FNTICDATQERQDAMY++V+EKVDL
Sbjct: 307 QTTMLKGETEEIGKLIEKTMMQKYGVENVNDHFMAFNTICDATQERQDAMYQLVKEKVDL 366
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
ILVVGGWNSSNTSHLQEI E GIPSYWIDSE+RIGPGN+I+YKL HGELVEK NWLP+G
Sbjct: 367 ILVVGGWNSSNTSHLQEIGELSGIPSYWIDSEQRIGPGNRISYKLNHGELVEKNNWLPEG 426
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 339
ITIG+TSGASTPDK VED L+KVFEIKR+E LQ+A
Sbjct: 427 PITIGVTSGASTPDKVVEDALQKVFEIKRQEILQVA 462
>gi|262411021|gb|ACY66876.1| P10Sh086H20 [Saccharum hybrid cultivar R570]
Length = 467
Score = 583 bits (1504), Expect = e-164, Method: Compositional matrix adjust.
Identities = 280/336 (83%), Positives = 307/336 (91%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFPEE+IW+TNEIIHNPTVNKRL+EM V+ IPV+ G K F+VV +GDVVVLPA
Sbjct: 132 IAYEARKQFPEERIWLTNEIIHNPTVNKRLDEMGVEIIPVDAGIKDFNVVEQGDVVVLPA 191
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGAAVEEM TLN K VQIVDTTCPWVSKVW VEKHKK +YTSIIHGKYSHEETVATASF
Sbjct: 192 FGAAVEEMYTLNEKKVQIVDTTCPWVSKVWNMVEKHKKSEYTSIIHGKYSHEETVATASF 251
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKYIIVKNM EA YVCDYILGG+L+GSSSTKE FLEKFKKAVS GFDPDVDL VGIAN
Sbjct: 252 AGKYIIVKNMAEATYVCDYILGGQLDGSSSTKEEFLEKFKKAVSPGFDPDVDLDMVGIAN 311
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETEEIGKLVEKT+M+K+GVENVN+HF++FNTICDATQERQDAMY++V+EKVDL
Sbjct: 312 QTTMLKGETEEIGKLVEKTIMQKYGVENVNDHFMAFNTICDATQERQDAMYQLVKEKVDL 371
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
ILV+GGWNSSNTSHLQEI E GIPSYWIDSE+RI PGN I+YKL HGELVEK NWLP+G
Sbjct: 372 ILVIGGWNSSNTSHLQEIGELSGIPSYWIDSEQRIEPGNMISYKLNHGELVEKVNWLPEG 431
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 339
ITIG+TSGASTPDK VED L+KVFEIKR+E LQ+A
Sbjct: 432 PITIGVTSGASTPDKVVEDALQKVFEIKRQEILQVA 467
>gi|82492446|gb|ABB78090.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase type 3
[Ginkgo biloba]
Length = 474
Score = 581 bits (1497), Expect = e-163, Method: Compositional matrix adjust.
Identities = 276/336 (82%), Positives = 308/336 (91%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFPEE+IW+TNEIIHNPTVNKR+EEM VQ IPV+E K+FDVV+KGDVV+LPA
Sbjct: 139 IAYEARKQFPEERIWMTNEIIHNPTVNKRIEEMKVQYIPVDEEGKRFDVVDKGDVVILPA 198
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGAAV EM L+ KNVQIVDTTCPWVSKVW +V KHK+GDYTSIIHGKY+HEETVATASF
Sbjct: 199 FGAAVHEMQYLSEKNVQIVDTTCPWVSKVWNTVVKHKQGDYTSIIHGKYAHEETVATASF 258
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG YIIVK + EA YVCDYIL G+LNGSS TK FL+KFK AVSKGFDPDV LVKVGIAN
Sbjct: 259 AGTYIIVKTIDEAAYVCDYILDGKLNGSSGTKAEFLQKFKNAVSKGFDPDVALVKVGIAN 318
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETE+IGKLVEKTMM KFGVEN+N+HFISFNTICDATQERQDAM+++V++K+DL
Sbjct: 319 QTTMLKGETEDIGKLVEKTMMHKFGVENINDHFISFNTICDATQERQDAMHQLVKDKLDL 378
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
ILV+GGWNSSNTSHLQEIAE GIPSYWIDS++RIGPGN IAYKL HGELVEKENWLP+G
Sbjct: 379 ILVIGGWNSSNTSHLQEIAELNGIPSYWIDSKERIGPGNMIAYKLNHGELVEKENWLPEG 438
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 339
ITIG+TSGASTPDK VEDVLK+VF+IK+EE LQ+A
Sbjct: 439 PITIGVTSGASTPDKVVEDVLKRVFQIKQEETLQVA 474
>gi|312281865|dbj|BAJ33798.1| unnamed protein product [Thellungiella halophila]
Length = 466
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 284/336 (84%), Positives = 313/336 (93%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFPEE++WITNEIIHNPTVNKRLEEM V+ IPVE+ KKQFDVV+K DVV+LPA
Sbjct: 131 IAYEARKQFPEERLWITNEIIHNPTVNKRLEEMDVKIIPVEDSKKQFDVVDKDDVVILPA 190
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA V+EM LN+K VQIVDTTCPWV+KVW VEKHKKG+YTSIIHGKY+HEET+ATASF
Sbjct: 191 FGAGVDEMYVLNDKKVQIVDTTCPWVTKVWNMVEKHKKGEYTSIIHGKYNHEETIATASF 250
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKYIIVKNMKEA YVCDYILGG+L+GSSSTKE F+EKFK AVSKGFDPD DL+KVGIAN
Sbjct: 251 AGKYIIVKNMKEANYVCDYILGGQLDGSSSTKEEFMEKFKYAVSKGFDPDKDLIKVGIAN 310
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETEEIGKL+E+TMMRK+GVENVN HFISFNTICDATQERQDA+Y++VEEK+DL
Sbjct: 311 QTTMLKGETEEIGKLIERTMMRKYGVENVNGHFISFNTICDATQERQDAIYELVEEKIDL 370
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
+LVVGGWNSSNT HLQEI+E RGIPSYWIDSEKRIGPGNKIAYKL +GELVEKEN+LPKG
Sbjct: 371 MLVVGGWNSSNTCHLQEISEARGIPSYWIDSEKRIGPGNKIAYKLHYGELVEKENFLPKG 430
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 339
ITIG+TSGASTPDK VED L KVF+IKREE LQLA
Sbjct: 431 PITIGVTSGASTPDKVVEDALVKVFDIKREELLQLA 466
>gi|217069180|gb|ACJ83115.1| hydroxymethylbutenyl diphosphate reductase [Oncidium hybrid
cultivar]
gi|217069182|gb|ACJ83116.1| hydroxymethylbutenyl diphosphate reductase [Oncidium hybrid
cultivar]
Length = 463
Score = 580 bits (1494), Expect = e-163, Method: Compositional matrix adjust.
Identities = 280/337 (83%), Positives = 309/337 (91%), Gaps = 1/337 (0%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFPEE+IWITNEIIHNPTVNKRLEEM V+NIP+E GKK DVV+K DVV+LPA
Sbjct: 127 IAYEARKQFPEERIWITNEIIHNPTVNKRLEEMDVKNIPIENGKKLLDVVDKHDVVILPA 186
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGAAV+EM TL+ K VQIVDTTCPWVSKVW +VEKHK+GDYTSIIHGKYSHEET+AT+SF
Sbjct: 187 FGAAVDEMYTLSQKKVQIVDTTCPWVSKVWNTVEKHKQGDYTSIIHGKYSHEETIATSSF 246
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
A KYI+VKN++EA YVCDYILGG+L+GSSSTKE FLEKFK AVS GFDPDVDLVK+GIAN
Sbjct: 247 AAKYIVVKNIEEAMYVCDYILGGQLDGSSSTKEDFLEKFKFAVSVGFDPDVDLVKLGIAN 306
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETE+IGKLVEKTMMRK GVEN+NEHF SFNTICDATQERQDAM K+VE+K+DL
Sbjct: 307 QTTMLKTETEDIGKLVEKTMMRKHGVENINEHFKSFNTICDATQERQDAMNKLVEDKLDL 366
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
ILVVGGWNSSNTSHLQEIAE GIPSYWID+E RIGPGNKI+YKL+HGELVEKEN+LP G
Sbjct: 367 ILVVGGWNSSNTSHLQEIAEMNGIPSYWIDNENRIGPGNKISYKLLHGELVEKENFLPSG 426
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKR-EEALQLA 339
ITIG+TSGASTPDK VED L KVF+IKR EE LQ+A
Sbjct: 427 PITIGVTSGASTPDKVVEDALIKVFDIKRKEEVLQMA 463
>gi|85813153|gb|ABC84344.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase [Ginkgo
biloba]
Length = 474
Score = 579 bits (1493), Expect = e-163, Method: Compositional matrix adjust.
Identities = 276/336 (82%), Positives = 307/336 (91%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFPEE+IW+TNEIIHNPTVNKR+EEM VQ IPV+E K+FDVV+KGDVV+LPA
Sbjct: 139 IAYEARKQFPEERIWMTNEIIHNPTVNKRIEEMKVQYIPVDEEGKRFDVVDKGDVVILPA 198
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGAAV EM L+ KNVQIVDTTCPWVSKVW +VEKHK+GDYTSIIHGKY+HEETVATASF
Sbjct: 199 FGAAVHEMQYLSEKNVQIVDTTCPWVSKVWNTVEKHKQGDYTSIIHGKYAHEETVATASF 258
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG YIIVK + EA YVCDYIL G+LNGSS TK FL+KFK AVSKGFDP V LVKVGIAN
Sbjct: 259 AGTYIIVKTIDEAAYVCDYILDGKLNGSSGTKAEFLQKFKNAVSKGFDPHVALVKVGIAN 318
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETE+IGKLVEKTMM KFGVEN+N+HFISFNTICDATQERQDAM+++V++K+DL
Sbjct: 319 QTTMLKGETEDIGKLVEKTMMHKFGVENINDHFISFNTICDATQERQDAMHQLVKDKLDL 378
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
ILV+GGWNSSNTSHLQEIAE GIPSYWIDSE+RIGPGN IAYKL HGELVEKENWLP+G
Sbjct: 379 ILVIGGWNSSNTSHLQEIAELNGIPSYWIDSEERIGPGNMIAYKLNHGELVEKENWLPEG 438
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 339
ITIG+TSGASTPDK VEDVLK+VF+IK+EE L +A
Sbjct: 439 PITIGVTSGASTPDKVVEDVLKRVFQIKQEETLPVA 474
>gi|82492444|gb|ABB78089.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase type 2
[Ginkgo biloba]
Length = 482
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 278/336 (82%), Positives = 303/336 (90%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFPEE+IW+TNEIIHNP VNKRLEEM VQ IP +QFD V GDVV+LPA
Sbjct: 147 IAYEARKQFPEERIWMTNEIIHNPAVNKRLEEMKVQYIPSGNEGEQFDAVEIGDVVILPA 206
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGAAV EM L+ KNVQIVDTTCPWVSKVW +VEKHKKGDYTSIIHGKY+HEETVATASF
Sbjct: 207 FGAAVHEMQILSEKNVQIVDTTCPWVSKVWNTVEKHKKGDYTSIIHGKYAHEETVATASF 266
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG YIIVKN+ EA YVCDYIL GEL+ SS TKE FLEKFK AVSKGF+PDVDLVK+GIAN
Sbjct: 267 AGTYIIVKNIAEATYVCDYILNGELDASSGTKEEFLEKFKNAVSKGFNPDVDLVKLGIAN 326
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETE+IGKLVEKTMMR+FGVEN+NEHFISFNTICDATQERQDAM K+V+EK+DL
Sbjct: 327 QTTMLKGETEDIGKLVEKTMMRRFGVENINEHFISFNTICDATQERQDAMDKLVKEKLDL 386
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
ILVVGGWNSSNTSHLQEIAE GI SYW+D +RIGPGNKIAYKL HGELVE+ENWLP+G
Sbjct: 387 ILVVGGWNSSNTSHLQEIAELNGISSYWVDGVQRIGPGNKIAYKLNHGELVEEENWLPEG 446
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 339
ITIG+TSGASTPDKAVEDVL+KVFEIK+EE LQ+A
Sbjct: 447 PITIGVTSGASTPDKAVEDVLRKVFEIKQEEVLQIA 482
>gi|183206805|gb|ACC54561.1| putative 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase
type 2 [Pinus densiflora]
Length = 487
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 274/336 (81%), Positives = 302/336 (89%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFP E+IWITNEIIHNPTVN+RLEEM V +IP+ K+FDVVNKGDVV+LPA
Sbjct: 152 IAYEARKQFPSERIWITNEIIHNPTVNERLEEMDVHSIPIGNEGKRFDVVNKGDVVILPA 211
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V EM L+ KNVQIVDTTCPWVSKVW +VEKHK+G+YTSIIHGKYSHEET+ATASF
Sbjct: 212 FGASVHEMQLLSEKNVQIVDTTCPWVSKVWNTVEKHKQGEYTSIIHGKYSHEETIATASF 271
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG YIIVKN+ EA YVCDYIL GEL+GSS TKE FL+KFK AVSKGFDPDVDLVK+GIAN
Sbjct: 272 AGTYIIVKNITEARYVCDYILNGELDGSSGTKEEFLKKFKNAVSKGFDPDVDLVKLGIAN 331
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETEEIGKL EKTMMR+FGVEN+N+HFISFNTICDATQERQDAM +V+EK+D
Sbjct: 332 QTTMLKGETEEIGKLAEKTMMRRFGVENINKHFISFNTICDATQERQDAMDDLVKEKLDF 391
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
ILVVGGWNSSNTSHLQEIAE IPSYWID E+RIGPGNKI +KL HGELVEK++WLP+G
Sbjct: 392 ILVVGGWNSSNTSHLQEIAELNDIPSYWIDDEQRIGPGNKITFKLNHGELVEKDHWLPEG 451
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 339
ITIGITSGASTPDK VED LKK+FEIKREE LQ A
Sbjct: 452 PITIGITSGASTPDKVVEDALKKIFEIKREEVLQAA 487
>gi|126697262|gb|ABO26588.1| type 2 1-hydroxy-2-methyl-2-(E)-butenyl-4-phosphate reductase
[Pinus taeda]
Length = 487
Score = 577 bits (1487), Expect = e-162, Method: Compositional matrix adjust.
Identities = 274/336 (81%), Positives = 303/336 (90%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFP E+IWITNEIIHNPTVN+RLEEM V +IP+ K+FDVVNKGDVV+LPA
Sbjct: 152 IAYEARKQFPVERIWITNEIIHNPTVNERLEEMDVHSIPIGNEGKRFDVVNKGDVVILPA 211
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V EM L+ KNVQIVDTTCPWVSKVW +VEKHK+G+YTSIIHGKYSHEET+ATASF
Sbjct: 212 FGASVHEMQLLSEKNVQIVDTTCPWVSKVWNTVEKHKQGEYTSIIHGKYSHEETIATASF 271
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG YIIVKN+ EA YVCDYIL GEL+GSS TKE FL+KFK AVSKGFDPDVDLVK+GIAN
Sbjct: 272 AGTYIIVKNITEARYVCDYILNGELDGSSGTKEEFLKKFKNAVSKGFDPDVDLVKLGIAN 331
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETEEIGKL EKTMMR+FGVEN+N+HFISFNTICDATQERQDAM +V+EK+D
Sbjct: 332 QTTMLKGETEEIGKLAEKTMMRRFGVENINKHFISFNTICDATQERQDAMDDLVKEKLDF 391
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
ILVVGGWNSSNTSHLQEIAE IPSYWID+E+RIGPGNKI +KL HGELVEK++WLP+G
Sbjct: 392 ILVVGGWNSSNTSHLQEIAELNDIPSYWIDNEQRIGPGNKITFKLNHGELVEKDHWLPEG 451
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 339
ITIGITSGASTPDK VED LKK+FEIKREE LQ A
Sbjct: 452 PITIGITSGASTPDKVVEDALKKIFEIKREEVLQAA 487
>gi|224284450|gb|ACN39959.1| unknown [Picea sitchensis]
Length = 485
Score = 575 bits (1483), Expect = e-162, Method: Compositional matrix adjust.
Identities = 272/335 (81%), Positives = 304/335 (90%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFP E+IWITNEIIHNPTVN+RLEEM VQ+IPV K+F VV+KGDVV+LPA
Sbjct: 150 IAYEARKQFPVERIWITNEIIHNPTVNERLEEMDVQSIPVGNEGKRFGVVDKGDVVILPA 209
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V EM L+ KNVQIVDTTCPWVSKVW +VEKHK+G+YTSIIHGKYSHEET+ATASF
Sbjct: 210 FGASVHEMQLLSEKNVQIVDTTCPWVSKVWNTVEKHKQGEYTSIIHGKYSHEETIATASF 269
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG YIIVKN+ EA YVCDYIL GE +GSS TKE FL+KF+ AVSKGFDPDVDLVK+GIAN
Sbjct: 270 AGTYIIVKNITEARYVCDYILNGEFDGSSGTKEEFLKKFENAVSKGFDPDVDLVKLGIAN 329
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETEEIGKL EKTMMR+FGVEN+N+HFISFNTICDATQERQDAM +V+EK+D
Sbjct: 330 QTTMLKGETEEIGKLAEKTMMRRFGVENINKHFISFNTICDATQERQDAMDDLVKEKLDF 389
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
ILVVGGWNSSNTSHLQEIAE GIPSYWID+E+RIGPGNKI++KL HGELVEK+NWLP G
Sbjct: 390 ILVVGGWNSSNTSHLQEIAELNGIPSYWIDNEQRIGPGNKISFKLNHGELVEKDNWLPSG 449
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQL 338
ITIG+TSGASTPDK VED LK++FEIKREEALQ+
Sbjct: 450 PITIGVTSGASTPDKVVEDALKRIFEIKREEALQV 484
>gi|374639363|gb|AEZ55670.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 [Salvia
miltiorrhiza]
Length = 462
Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust.
Identities = 270/336 (80%), Positives = 306/336 (91%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IA+EAR+QFP + +W+TNE+IHNPTVNK LE+M VQ IPV EGKK+F+VV++GDVVVLPA
Sbjct: 127 IAFEARRQFPSDNMWLTNEMIHNPTVNKMLEDMEVQTIPVNEGKKEFEVVSEGDVVVLPA 186
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGAAV+EM L+ KNVQIVDTTCPWVSKVW +V+KHKK DYTSIIHGKY+HEETVATASF
Sbjct: 187 FGAAVDEMRILSEKNVQIVDTTCPWVSKVWNTVDKHKKKDYTSIIHGKYNHEETVATASF 246
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
A KYIIVKN+KEA YVCDYILGG L+GSSST+EAFLEKFK AVSKGFDPD DL KVGIAN
Sbjct: 247 ARKYIIVKNIKEATYVCDYILGGGLDGSSSTREAFLEKFKYAVSKGFDPDKDLEKVGIAN 306
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETEEIG+L+E+TMMRK+GVEN HF+SFNTICDATQERQDAMYK+VE+KVDL
Sbjct: 307 QTTMLKSETEEIGQLIERTMMRKYGVENTTNHFMSFNTICDATQERQDAMYKLVEDKVDL 366
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
ILVVGG+NSSNTSHLQEIAE RGIPSYW+DSEKRIGPGNKI++KL+HGELVEK N+LP G
Sbjct: 367 ILVVGGFNSSNTSHLQEIAEFRGIPSYWVDSEKRIGPGNKISHKLLHGELVEKVNFLPDG 426
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 339
ITIG+TSGASTPD VED+LKKVF +KR+E LQ A
Sbjct: 427 PITIGVTSGASTPDNVVEDILKKVFALKRDEVLQTA 462
>gi|81076565|gb|ABB55395.1| LYTB-like protein precursor-like [Solanum tuberosum]
Length = 462
Score = 568 bits (1465), Expect = e-159, Method: Compositional matrix adjust.
Identities = 277/337 (82%), Positives = 314/337 (93%), Gaps = 1/337 (0%)
Query: 4 IAYEARKQ-FPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLP 62
IAYEARK F + WITNEIIHNPTVN+RLE+M V+ P+EEGKK FDVV+K DVVVLP
Sbjct: 126 IAYEARKTVFQQRGFWITNEIIHNPTVNRRLEDMDVKKNPLEEGKKNFDVVDKDDVVVLP 185
Query: 63 AFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATAS 122
AFGAAV+EM+ L++KNVQIVDTTCPWV+KVW +VEKHKKG YTSIIHGKY+HEETVATAS
Sbjct: 186 AFGAAVDEMLVLSDKNVQIVDTTCPWVTKVWNTVEKHKKGAYTSIIHGKYAHEETVATAS 245
Query: 123 FAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIA 182
FAGKYIIVKNM EA YVCDYILGG+L+GSSSTKEAF++KFK AVS+GFDPDVDLVK GIA
Sbjct: 246 FAGKYIIVKNMAEATYVCDYILGGKLDGSSSTKEAFMQKFKYAVSEGFDPDVDLVKAGIA 305
Query: 183 NQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVD 242
NQTTMLKGET +IGKLVE+TMM+K+GVENVN HF+SFNTICDATQERQDAMYK+VE+K+D
Sbjct: 306 NQTTMLKGETADIGKLVERTMMQKYGVENVNNHFVSFNTICDATQERQDAMYKLVEQKLD 365
Query: 243 LILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPK 302
L+LV+GGWNSSNTSHLQEIAE+RGIPSYWIDSE+R+GPGNKI+YKLMHGELVEKEN+LP+
Sbjct: 366 LMLVIGGWNSSNTSHLQEIAEERGIPSYWIDSEQRVGPGNKISYKLMHGELVEKENFLPE 425
Query: 303 GQITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 339
G ITIG+TSGASTPDK VEDVL K+F+IKREEALQLA
Sbjct: 426 GPITIGVTSGASTPDKVVEDVLIKLFDIKREEALQLA 462
>gi|449502429|ref|XP_004161637.1| PREDICTED: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase,
chloroplastic-like [Cucumis sativus]
Length = 465
Score = 565 bits (1456), Expect = e-158, Method: Compositional matrix adjust.
Identities = 268/335 (80%), Positives = 300/335 (89%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
AYEARKQ+P E IWITNEIIHNPTVNKRLEEM V NIP+EEG K+FDVVN GDVV+LPA
Sbjct: 127 FAYEARKQYPSETIWITNEIIHNPTVNKRLEEMGVHNIPLEEGNKRFDVVNPGDVVILPA 186
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGAAV+E++ LN+K V+IVDTTCPWVSKVW +V KHKKG+YTSIIHGKY HEET+ATASF
Sbjct: 187 FGAAVDEILVLNDKKVKIVDTTCPWVSKVWNAVGKHKKGEYTSIIHGKYRHEETIATASF 246
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG+YIIVK+M EA V DYILG E NGS STKE FL+KFK AVSKGFDPD+DL+K+GIAN
Sbjct: 247 AGRYIIVKDMAEAACVSDYILGVEHNGSVSTKEEFLKKFKSAVSKGFDPDIDLMKIGIAN 306
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETEEIGKL+EKTMMRK+GVEN+NEHFISFNTIC+ATQ RQDAMY++V+E VDL
Sbjct: 307 QTTMLKGETEEIGKLMEKTMMRKYGVENINEHFISFNTICNATQVRQDAMYELVKEDVDL 366
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
+LVVGGWNSSNTSHLQEIAE RG+PSYWIDSE+RIGPGN I+YKL HGEL KENWLP G
Sbjct: 367 MLVVGGWNSSNTSHLQEIAEARGVPSYWIDSEQRIGPGNSISYKLAHGELANKENWLPDG 426
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQL 338
ITIG+TSGASTPDK VEDVLKKVF+IK + QL
Sbjct: 427 HITIGVTSGASTPDKVVEDVLKKVFDIKGDGNAQL 461
>gi|449455318|ref|XP_004145400.1| PREDICTED: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase,
chloroplastic-like [Cucumis sativus]
gi|449471527|ref|XP_004153335.1| PREDICTED: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase,
chloroplastic-like [Cucumis sativus]
Length = 465
Score = 565 bits (1456), Expect = e-158, Method: Compositional matrix adjust.
Identities = 268/335 (80%), Positives = 300/335 (89%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
AYEARKQ+P E IWITNEIIHNPTVNKRLEEM V NIP+EEG K+FDVVN GDVV+LPA
Sbjct: 127 FAYEARKQYPSETIWITNEIIHNPTVNKRLEEMGVHNIPLEEGNKRFDVVNPGDVVILPA 186
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGAAV+E++ LN+K V+IVDTTCPWVSKVW +V KHKKG+YTSIIHGKY HEET+ATASF
Sbjct: 187 FGAAVDEILVLNDKKVKIVDTTCPWVSKVWNAVGKHKKGEYTSIIHGKYRHEETIATASF 246
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG+YIIVK+M EA V DYILG E NGS STKE FL+KFK AVSKGFDPD+DL+K+GIAN
Sbjct: 247 AGRYIIVKDMAEAACVSDYILGVEHNGSISTKEEFLKKFKSAVSKGFDPDIDLMKIGIAN 306
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETEEIGKL+EKTMMRK+GVEN+NEHFISFNTIC+ATQ RQDAMY++V+E VDL
Sbjct: 307 QTTMLKGETEEIGKLMEKTMMRKYGVENINEHFISFNTICNATQVRQDAMYELVKEDVDL 366
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
+LVVGGWNSSNTSHLQEIAE RG+PSYWIDSE+RIGPGN I+YKL HGEL KENWLP G
Sbjct: 367 MLVVGGWNSSNTSHLQEIAEARGVPSYWIDSEQRIGPGNSISYKLAHGELANKENWLPDG 426
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQL 338
ITIG+TSGASTPDK VEDVLKKVF+IK + QL
Sbjct: 427 HITIGVTSGASTPDKVVEDVLKKVFDIKGDGNAQL 461
>gi|393008683|gb|AFN02125.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase [Huperzia
carinata]
Length = 478
Score = 565 bits (1456), Expect = e-158, Method: Compositional matrix adjust.
Identities = 265/334 (79%), Positives = 304/334 (91%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFP + IWITNEIIHNP+VN+R++EM V+ IPVE+ K FDVV+KGDVV+LPA
Sbjct: 140 IAYEARKQFPTDNIWITNEIIHNPSVNQRIDEMEVKFIPVEKEGKNFDVVSKGDVVILPA 199
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V+EM L+ K VQIVDTTCPWVSKVW +VEKHKK YTS+IHGKYSHEETVATASF
Sbjct: 200 FGASVQEMQILDEKKVQIVDTTCPWVSKVWNTVEKHKKATYTSVIHGKYSHEETVATASF 259
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG YIIVKNM+EA Y+CDY+LGG+L+GSSSTKE LEKFK A SKGFDPD DLVKVGIAN
Sbjct: 260 AGAYIIVKNMQEASYLCDYVLGGQLDGSSSTKEDLLEKFKYATSKGFDPDRDLVKVGIAN 319
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETE IGKL+EKTMM+K+GVENVN+HF+SFNTICDATQERQDA++K+V+E++DL
Sbjct: 320 QTTMLKGETEAIGKLLEKTMMQKYGVENVNDHFMSFNTICDATQERQDAIHKLVKEELDL 379
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
ILVVGGWNSSNTSHLQEIAE GIPSYWID+EKRIGPGNKIA+KL HGELVEKE+WLP+G
Sbjct: 380 ILVVGGWNSSNTSHLQEIAEINGIPSYWIDTEKRIGPGNKIAFKLNHGELVEKEDWLPQG 439
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQ 337
+TIG+TSGASTPDK VEDVL VF++K EEAL+
Sbjct: 440 PVTIGVTSGASTPDKVVEDVLNTVFQLKSEEALK 473
>gi|156068994|gb|ABU44490.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase [Taxus x
media]
Length = 474
Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust.
Identities = 279/336 (83%), Positives = 306/336 (91%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEA++QFP+ KIW+TNEIIHNPTV+++ EEMA+Q IPVE KQ DVV +GDVVVLPA
Sbjct: 139 IAYEAKRQFPDRKIWLTNEIIHNPTVSQKFEEMAIQYIPVESEVKQMDVVGEGDVVVLPA 198
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V EM L+ KNVQIVDTTCPWVSKVW +VEKHK G YTSIIHGKYSHEETVATASF
Sbjct: 199 FGASVHEMQALSEKNVQIVDTTCPWVSKVWNTVEKHKTGSYTSIIHGKYSHEETVATASF 258
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKYIIVKN+KEA YVCDYIL GEL+GSS TKE FLEKFK A+SKGFDPDVDL+K+GIAN
Sbjct: 259 AGKYIIVKNIKEATYVCDYILNGELDGSSGTKEEFLEKFKYAISKGFDPDVDLLKMGIAN 318
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETEEIGKL EKTMMRK+GVENVN HF SFNTICDATQERQDAM K+V EKVDL
Sbjct: 319 QTTMLKGETEEIGKLEEKTMMRKYGVENVNNHFTSFNTICDATQERQDAMDKLVTEKVDL 378
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
+LVVGGWNSSNTSHLQEIAE GIPSYW+DSE+RIGPGNKIA+KL HGELVEK+NWLP+G
Sbjct: 379 MLVVGGWNSSNTSHLQEIAELNGIPSYWVDSEQRIGPGNKIAFKLNHGELVEKDNWLPEG 438
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 339
ITIGITSGASTPDK VEDVL+KVFEIKREEALQ+A
Sbjct: 439 PITIGITSGASTPDKVVEDVLRKVFEIKREEALQVA 474
>gi|402749273|gb|AFQ95412.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Salvia
miltiorrhiza]
Length = 463
Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust.
Identities = 274/336 (81%), Positives = 311/336 (92%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFP E IW+TNE+IHNPTVN+RLEEM V+ IP+ GKK+FDVV+KGDVVVLPA
Sbjct: 128 IAYEARKQFPTENIWLTNEVIHNPTVNERLEEMNVKIIPLNNGKKEFDVVDKGDVVVLPA 187
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGAAV+EM L++KNVQIVDTTCPWVSKVW +VEKHKKG+YTSIIHGKYSHEETVATASF
Sbjct: 188 FGAAVDEMRILSDKNVQIVDTTCPWVSKVWNTVEKHKKGEYTSIIHGKYSHEETVATASF 247
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGK++IVKNM EA YVCDYILGG L+GSSSTKEAFLEKFK A+SKGFDPD D KVGIAN
Sbjct: 248 AGKFVIVKNMTEATYVCDYILGGGLDGSSSTKEAFLEKFKFAISKGFDPDKDFEKVGIAN 307
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETE+IGKLVE+TMMRK+GVEN +HFISFNTICDATQERQDAMYK+V++ VDL
Sbjct: 308 QTTMLKGETEDIGKLVERTMMRKYGVENATDHFISFNTICDATQERQDAMYKLVDDPVDL 367
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
ILV+GGWNSSNTSHLQEI+E RGIPSYW+D+EKRIGPGNKI++KLMHGELVEKENW+P+G
Sbjct: 368 ILVIGGWNSSNTSHLQEISELRGIPSYWVDNEKRIGPGNKISHKLMHGELVEKENWMPEG 427
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 339
+TIG+TSGASTPDK V+DVL+KVFE+K+ E LQ A
Sbjct: 428 PVTIGVTSGASTPDKVVQDVLEKVFEMKQAEVLQSA 463
>gi|374639361|gb|AEZ55669.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1 [Salvia
miltiorrhiza]
Length = 463
Score = 563 bits (1452), Expect = e-158, Method: Compositional matrix adjust.
Identities = 274/336 (81%), Positives = 311/336 (92%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFP E IW+TNE+IHNPTVN+RLEEM V+ IP+ GKK+FDVV+KGDVVVLPA
Sbjct: 128 IAYEARKQFPTENIWLTNEVIHNPTVNERLEEMNVKIIPLNNGKKEFDVVDKGDVVVLPA 187
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGAAV+EM L++KNVQIVDTTCPWVSKVW +VEKHKKG+YTSIIHGKYSHEETVATASF
Sbjct: 188 FGAAVDEMRILSDKNVQIVDTTCPWVSKVWNTVEKHKKGEYTSIIHGKYSHEETVATASF 247
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGK++IVKNM EA YVCDYILGG L+GSSSTKEAFLEKFK A+SKGFDPD D KVGIAN
Sbjct: 248 AGKFVIVKNMTEATYVCDYILGGGLDGSSSTKEAFLEKFKFAISKGFDPDKDFEKVGIAN 307
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETE+IGKLVE+TMMRK+GVEN +HFISFNTICDATQERQDAMYK+V++ VDL
Sbjct: 308 QTTMLKGETEDIGKLVERTMMRKYGVENATDHFISFNTICDATQERQDAMYKLVDDPVDL 367
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
ILV+GGWNSSNTSHLQEI+E RGIPSYW+D+EKRIGPGNKI++KLMHGELVEKENW+P+G
Sbjct: 368 ILVIGGWNSSNTSHLQEISELRGIPSYWVDNEKRIGPGNKISHKLMHGELVEKENWMPEG 427
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 339
+TIG+TSGASTPDK V+DVL+KVFE+K+ E LQ A
Sbjct: 428 PVTIGVTSGASTPDKVVQDVLEKVFEMKQAEVLQSA 463
>gi|82492442|gb|ABB78088.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase type 1
[Ginkgo biloba]
Length = 487
Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust.
Identities = 265/334 (79%), Positives = 303/334 (90%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFP++K+W+TNEIIHNPTVN+RL++M +++IPV E K FDVVN DVV+LPA
Sbjct: 152 IAYEARKQFPDQKLWVTNEIIHNPTVNQRLKDMKIEDIPVREEGKVFDVVNSEDVVILPA 211
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGAA++EM L+ K VQIVDTTCPWVSKVW +VEKHKK YTS+IHGK HEET AT+SF
Sbjct: 212 FGAALQEMQILDEKKVQIVDTTCPWVSKVWNTVEKHKKESYTSVIHGKQGHEETTATSSF 271
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKYIIVK++KEA YVCDYILGG+L+GSSS+KE FL+KFK AVS+GFDPD DLVKVGIAN
Sbjct: 272 AGKYIIVKDIKEATYVCDYILGGKLDGSSSSKEEFLKKFKMAVSRGFDPDRDLVKVGIAN 331
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETEEIGKL+EKTMM+K+GVENVNEHF+SFNTICDATQERQDAMY +V+EK+DL
Sbjct: 332 QTTMLKGETEEIGKLLEKTMMQKYGVENVNEHFMSFNTICDATQERQDAMYDLVKEKLDL 391
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
ILVVGGWNSSNTSHLQEIAE GIPSYWIDSEKRIGPGN+IAYKL +GELVEKENWLP G
Sbjct: 392 ILVVGGWNSSNTSHLQEIAEHSGIPSYWIDSEKRIGPGNRIAYKLSYGELVEKENWLPPG 451
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQ 337
I IGITSGASTPDK +EDVL+ VF++K E+ALQ
Sbjct: 452 PIKIGITSGASTPDKILEDVLELVFKLKHEDALQ 485
>gi|58761369|gb|AAW82381.1| chloroplast 1-hydroxy-2-methyl-butenyl 4-diphosphate reductase
[Arabidopsis thaliana]
Length = 468
Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust.
Identities = 270/338 (79%), Positives = 307/338 (90%), Gaps = 2/338 (0%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFPEE++WITNEIIHNPTVNKRLE+M V+ IPVE+ KKQFDVV K DVV+LPA
Sbjct: 131 IAYEARKQFPEERLWITNEIIHNPTVNKRLEDMDVKIIPVEDSKKQFDVVEKDDVVILPA 190
Query: 64 FGAAVEEMVTLNNKNVQI-VDTTCPWVS-KVWTSVEKHKKGDYTSIIHGKYSHEETVATA 121
FGA V+EM LN+K ++ + + +V+ KVW +VEKHKKG+YTS+IHGKY+HEET+ATA
Sbjct: 191 FGAGVDEMYVLNDKKHRLLISSFLTFVTLKVWNTVEKHKKGEYTSVIHGKYNHEETIATA 250
Query: 122 SFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGI 181
SFAGKYIIVKNMKEA YVCDYILGG+ +GSSSTKE F+EKFK A+SKGFDPD DLVKVGI
Sbjct: 251 SFAGKYIIVKNMKEANYVCDYILGGQYDGSSSTKEEFMEKFKYAISKGFDPDNDLVKVGI 310
Query: 182 ANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKV 241
ANQTTMLKGETEEIG+L+E TMMRK+GVENV+ HFISFNTICDATQERQDA+Y++VEEK+
Sbjct: 311 ANQTTMLKGETEEIGRLLETTMMRKYGVENVSGHFISFNTICDATQERQDAIYELVEEKI 370
Query: 242 DLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLP 301
DL+LVVGGWNSSNTSHLQEI+E RGIPSYWIDSEKRIGPGNKIAYKL +GELVEKEN+LP
Sbjct: 371 DLMLVVGGWNSSNTSHLQEISEARGIPSYWIDSEKRIGPGNKIAYKLHYGELVEKENFLP 430
Query: 302 KGQITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 339
KG ITIG+TSGASTPDK VED L KVF+IKREE LQLA
Sbjct: 431 KGPITIGVTSGASTPDKVVEDALVKVFDIKREELLQLA 468
>gi|126697260|gb|ABO26587.1| type 1 1-hydroxy-2-methyl-2-(E)-butenyl-4-phosphate reductase
[Pinus taeda]
Length = 485
Score = 560 bits (1442), Expect = e-157, Method: Compositional matrix adjust.
Identities = 262/335 (78%), Positives = 303/335 (90%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFP++K+WITNEIIHNPTVN+RL+EM +++IPV E K+FDVVN DVV+LPA
Sbjct: 150 IAYEARKQFPDQKLWITNEIIHNPTVNQRLKEMQIEDIPVMEEGKKFDVVNNDDVVILPA 209
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGAA+ EM L+ K V+IVDTTCPWVSKVW +VEKHKK +TS+IHGK HEETVAT+SF
Sbjct: 210 FGAALSEMQILDEKGVKIVDTTCPWVSKVWNTVEKHKKESFTSVIHGKKGHEETVATSSF 269
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKYIIVK++KEA YVCDY+L G+L+GSSSTKE FL+KF+KA+S+GFDPD DLVKVGIAN
Sbjct: 270 AGKYIIVKDIKEATYVCDYVLAGKLDGSSSTKEEFLKKFEKAISRGFDPDCDLVKVGIAN 329
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETEEIGKL+EKTMM+K+GVE +NEHF+SFNTICDATQERQDAMY +V+EK+DL
Sbjct: 330 QTTMLKGETEEIGKLLEKTMMQKYGVEFINEHFMSFNTICDATQERQDAMYNLVKEKLDL 389
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
ILVVGGWNSSNTSHLQEIAE GIP+YWIDSEKRIGPGN+IAYKL HGELVEKENWLP G
Sbjct: 390 ILVVGGWNSSNTSHLQEIAEQNGIPTYWIDSEKRIGPGNRIAYKLSHGELVEKENWLPTG 449
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQL 338
+ IGITSGASTPDK +ED LK VF++K EEALQ+
Sbjct: 450 PLKIGITSGASTPDKILEDTLKVVFKMKDEEALQM 484
>gi|224285113|gb|ACN40284.1| unknown [Picea sitchensis]
Length = 485
Score = 555 bits (1431), Expect = e-156, Method: Compositional matrix adjust.
Identities = 260/334 (77%), Positives = 303/334 (90%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFP++K+WITNEIIHNPTVN+RL+EM +++IPV E K+FDVVN DVV+LPA
Sbjct: 150 IAYEARKQFPDQKLWITNEIIHNPTVNQRLKEMQIEDIPVMEEGKKFDVVNSDDVVILPA 209
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGAA+ EM L+ K+V+IVDTTCPWVSKVW +VEKHKK +TS+IHGK HEETVAT+SF
Sbjct: 210 FGAALSEMQILDEKSVKIVDTTCPWVSKVWNTVEKHKKESFTSVIHGKKGHEETVATSSF 269
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKYIIVK+++EA YVCDYIL G+L+GSS TK+ FL+KF+KA+S+GFDPD DLVKVGIAN
Sbjct: 270 AGKYIIVKDIREAIYVCDYILAGKLDGSSGTKDEFLKKFEKAISRGFDPDCDLVKVGIAN 329
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETEEIGKL+EKTMM+K+GVE +N+HF+SFNTICDATQERQDAMY +V+EK+DL
Sbjct: 330 QTTMLKGETEEIGKLLEKTMMQKYGVEIINDHFMSFNTICDATQERQDAMYNLVKEKLDL 389
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
ILVVGGWNSSNTSHLQEIAE GIP+YWIDSEKRIGPGN+IAYKL HGELVEKENWLP G
Sbjct: 390 ILVVGGWNSSNTSHLQEIAEQNGIPTYWIDSEKRIGPGNRIAYKLSHGELVEKENWLPTG 449
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQ 337
+ IGITSGASTPDK +EDVLK VF++K EEALQ
Sbjct: 450 PLKIGITSGASTPDKILEDVLKVVFKMKDEEALQ 483
>gi|302767946|ref|XP_002967393.1| hypothetical protein SELMODRAFT_270627 [Selaginella moellendorffii]
gi|300165384|gb|EFJ31992.1| hypothetical protein SELMODRAFT_270627 [Selaginella moellendorffii]
Length = 468
Score = 555 bits (1430), Expect = e-155, Method: Compositional matrix adjust.
Identities = 259/333 (77%), Positives = 297/333 (89%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFP++ IWITNEIIHNPTVN++LEEM ++ IPVE+ K F VV + DVVV PA
Sbjct: 135 IAYEARKQFPDQHIWITNEIIHNPTVNQKLEEMEIKMIPVEDKVKDFSVVKEKDVVVFPA 194
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA V+EM L K VQIVDTTCPWV+KVW SVEKHKK YTS+IHGKY+HEETVATASF
Sbjct: 195 FGATVQEMQLLAEKKVQIVDTTCPWVAKVWNSVEKHKKSSYTSVIHGKYAHEETVATASF 254
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKYIIVKNMKEA YVCDYILGG+L+GSS TKE LEKFK A SKGFDPD DLV+VGIAN
Sbjct: 255 AGKYIIVKNMKEATYVCDYILGGKLDGSSGTKEELLEKFKYATSKGFDPDEDLVRVGIAN 314
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETE+IGKL+++TMM+K+GVEN N+HF+SFNTICDATQERQDAM+ +V+EK+DL
Sbjct: 315 QTTMLKGETEDIGKLLQRTMMQKYGVENTNDHFMSFNTICDATQERQDAMFTLVKEKLDL 374
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++VVGGWNSSNTSHLQEI E IPSYWID+E+RIGPGNKIAY+L HGELVEKENWLP G
Sbjct: 375 LIVVGGWNSSNTSHLQEIGEINNIPSYWIDTEERIGPGNKIAYRLNHGELVEKENWLPTG 434
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEAL 336
+TIGITSGASTPDK VEDVLK+VF++K++EAL
Sbjct: 435 SVTIGITSGASTPDKVVEDVLKQVFQLKKQEAL 467
>gi|302753790|ref|XP_002960319.1| hypothetical protein SELMODRAFT_163924 [Selaginella moellendorffii]
gi|300171258|gb|EFJ37858.1| hypothetical protein SELMODRAFT_163924 [Selaginella moellendorffii]
Length = 468
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 259/333 (77%), Positives = 297/333 (89%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFP++ IWITNEIIHNPTVN++LEEM ++ IPVE+ K F VV + DVVV PA
Sbjct: 135 IAYEARKQFPDQHIWITNEIIHNPTVNQKLEEMEIKMIPVEDKVKDFSVVKEKDVVVFPA 194
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA V+EM L K VQIVDTTCPWV+KVW SVEKHKK YTS+IHGKY+HEETVATASF
Sbjct: 195 FGATVQEMQLLAEKKVQIVDTTCPWVAKVWNSVEKHKKSSYTSVIHGKYAHEETVATASF 254
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKYIIVKNMKEA YVCDYILGG+L+GSS TKE LEKFK A SKGFDPD DLV+VGIAN
Sbjct: 255 AGKYIIVKNMKEATYVCDYILGGKLDGSSGTKEELLEKFKYATSKGFDPDEDLVRVGIAN 314
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETE+IGKL+++TMM+K+GVEN N+HF+SFNTICDATQERQDAM+ +V+EK+DL
Sbjct: 315 QTTMLKGETEDIGKLLQRTMMQKYGVENTNDHFMSFNTICDATQERQDAMFTLVKEKLDL 374
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++VVGGWNSSNTSHLQEI E IPSYWID+E+RIGPGNKIAY+L HGELVEKENWLP G
Sbjct: 375 LIVVGGWNSSNTSHLQEIGEINNIPSYWIDTEERIGPGNKIAYRLNHGELVEKENWLPTG 434
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEAL 336
+TIGITSGASTPDK VEDVLK+VF++K++EAL
Sbjct: 435 PVTIGITSGASTPDKVVEDVLKQVFQLKKQEAL 467
>gi|183206803|gb|ACC54560.1| putative 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase
type 1 [Pinus densiflora]
Length = 485
Score = 552 bits (1423), Expect = e-155, Method: Compositional matrix adjust.
Identities = 258/335 (77%), Positives = 299/335 (89%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFP++K+WITNEI+HNPTVN+RL+EM +++IPV E K+FDVVN DVV+LPA
Sbjct: 150 IAYEARKQFPDQKLWITNEIMHNPTVNQRLKEMQIEDIPVMEEGKKFDVVNNDDVVILPA 209
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGAA+ EM L+ K V+I DTTCPWVSKVW +VEKHKK +TS+IHGK HEETVAT+SF
Sbjct: 210 FGAALSEMQILDEKGVKIADTTCPWVSKVWNTVEKHKKESFTSVIHGKKGHEETVATSSF 269
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKYIIVK++KEA YVCDYIL G+L+GSSSTKE FL+KF+KA+S+GFDPD DLVKVGIAN
Sbjct: 270 AGKYIIVKDIKEATYVCDYILAGKLDGSSSTKEEFLKKFEKAISRGFDPDCDLVKVGIAN 329
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETEEIGKL+EKTMM+K+GVE +NEHF+ FNTICDATQERQDAMY +V+EK+DL
Sbjct: 330 QTTMLKGETEEIGKLLEKTMMQKYGVEFINEHFMCFNTICDATQERQDAMYNLVKEKLDL 389
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
ILVVGGWNSSNTSHLQEIAE G P+YWIDSEKRIGPGN+IAYKL HGELV KENWLP G
Sbjct: 390 ILVVGGWNSSNTSHLQEIAEQNGTPTYWIDSEKRIGPGNRIAYKLSHGELVGKENWLPTG 449
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQL 338
+ IGITSGASTPDK +ED LK VF++K EEALQ+
Sbjct: 450 PLKIGITSGASTPDKILEDTLKVVFKMKDEEALQM 484
>gi|168011356|ref|XP_001758369.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690404|gb|EDQ76771.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 482
Score = 552 bits (1422), Expect = e-155, Method: Compositional matrix adjust.
Identities = 254/334 (76%), Positives = 300/334 (89%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFPE+K+W+TNEIIHNPTVN+++ +M + + V E K F VV++GDVV+LPA
Sbjct: 147 IAYEARKQFPEQKLWLTNEIIHNPTVNQKMTDMGISELSVTENGKDFSVVDQGDVVILPA 206
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V+EM L++K VQIVDTTCPWVSKVW +VEKHKKG YTS+IHGKY+HEETVATASF
Sbjct: 207 FGASVQEMQILDDKKVQIVDTTCPWVSKVWNTVEKHKKGTYTSVIHGKYAHEETVATASF 266
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKYII KN+KEA Y+CDYILGG+L+GSS TKE FLEKFK A+SKGFDPD DL KVGIAN
Sbjct: 267 AGKYIIAKNIKEATYICDYILGGKLDGSSGTKEDFLEKFKYAISKGFDPDTDLEKVGIAN 326
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETEEIGKL+EKTMM+K+GVENV HF+SFNTICDATQERQDAM+K+VE+KVDL
Sbjct: 327 QTTMLKGETEEIGKLLEKTMMQKYGVENVTNHFMSFNTICDATQERQDAMFKLVEDKVDL 386
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
ILVVGGWNSSNTSHLQEIAE +G+PSYWID+E+R+ G +IA+KL HGE VEK++WLP+G
Sbjct: 387 ILVVGGWNSSNTSHLQEIAELKGVPSYWIDTEERMLSGKRIAFKLNHGEYVEKDDWLPEG 446
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQ 337
IT+GITSGASTPDK VEDVL+++F+ KREE LQ
Sbjct: 447 PITVGITSGASTPDKVVEDVLQRLFQFKREEVLQ 480
>gi|168048552|ref|XP_001776730.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671879|gb|EDQ58424.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 475
Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust.
Identities = 248/335 (74%), Positives = 294/335 (87%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFPE+++W+TNEIIHNPTVN+R+ +M ++ + V E K F V KGDVV+LPA
Sbjct: 140 IAYEARKQFPEQQLWLTNEIIHNPTVNQRMTDMEIKELSVTENGKDFSPVEKGDVVILPA 199
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+++EM L+ K VQIVDTTCPWVSKVW +VEKH+K YTS+IHGKY+HEETVATASF
Sbjct: 200 FGASLQEMQILDEKKVQIVDTTCPWVSKVWNTVEKHRKNIYTSVIHGKYAHEETVATASF 259
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKYII KN+KEA Y+CDYILGG+L+GSS TKE FLEKFK A+SK FDPD DL KVGIAN
Sbjct: 260 AGKYIIAKNIKEATYICDYILGGKLDGSSGTKEEFLEKFKYAISKAFDPDRDLEKVGIAN 319
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETEEIGKL+E+TMM+K+GVEN +HF+SFNTICDATQERQDAMYK+V++KVDL
Sbjct: 320 QTTMLKGETEEIGKLLERTMMQKYGVENATDHFMSFNTICDATQERQDAMYKLVDDKVDL 379
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
+LVVGGWNSSNTSHLQEIAE + IPSYWID+ +R+ G +IA+KL HGE VEK+NWLP+G
Sbjct: 380 VLVVGGWNSSNTSHLQEIAELKSIPSYWIDTPERMLSGKRIAFKLNHGEYVEKDNWLPEG 439
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQL 338
IT+GITSGASTPDK VEDVLK++F+ KREE L L
Sbjct: 440 PITVGITSGASTPDKVVEDVLKRLFQFKREEVLAL 474
>gi|4455180|emb|CAB36712.1| putative protein [Arabidopsis thaliana]
gi|7270385|emb|CAB80152.1| putative protein [Arabidopsis thaliana]
Length = 452
Score = 519 bits (1337), Expect = e-145, Method: Compositional matrix adjust.
Identities = 256/338 (75%), Positives = 292/338 (86%), Gaps = 18/338 (5%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYEARKQFPEE++WITNEIIHNPTVNKRLE+M V+ IPVE+ KKQFDVV K DVV+LPA
Sbjct: 131 IAYEARKQFPEERLWITNEIIHNPTVNKRLEDMDVKIIPVEDSKKQFDVVEKDDVVILPA 190
Query: 64 FGAAVEEMVTLNNKNVQI-VDTTCPWVS-KVWTSVEKHKKGDYTSIIHGKYSHEETVATA 121
FGA V+EM LN+K ++ + + +V+ KVW +VEKHKKG+YTS+IHGKY+HEET+ATA
Sbjct: 191 FGAGVDEMYVLNDKKHRLLISSFLTFVTLKVWNTVEKHKKGEYTSVIHGKYNHEETIATA 250
Query: 122 SFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGI 181
SFAGKYIIVKNMKEA YVCDYILGG+ +GSSSTKE F+EKFK A+SKGFDPD DLVKVGI
Sbjct: 251 SFAGKYIIVKNMKEANYVCDYILGGQYDGSSSTKEEFMEKFKYAISKGFDPDNDLVKVGI 310
Query: 182 ANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKV 241
ANQTTMLKGETEEIG+L+E TMMRK+GVEN ERQDA+Y++VEEK+
Sbjct: 311 ANQTTMLKGETEEIGRLLETTMMRKYGVEN----------------ERQDAIYELVEEKI 354
Query: 242 DLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLP 301
DL+LVVGGWNSSNTSHLQEI+E RGIPSYWIDSEKRIGPGNKIAYKL +GELVEKEN+LP
Sbjct: 355 DLMLVVGGWNSSNTSHLQEISEARGIPSYWIDSEKRIGPGNKIAYKLHYGELVEKENFLP 414
Query: 302 KGQITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 339
KG ITIG+TSGASTPDK VED L KVF+IKREE LQLA
Sbjct: 415 KGPITIGVTSGASTPDKVVEDALVKVFDIKREELLQLA 452
>gi|297601630|ref|NP_001051168.2| Os03g0732000 [Oryza sativa Japonica Group]
gi|255674867|dbj|BAF13082.2| Os03g0732000 [Oryza sativa Japonica Group]
Length = 482
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 234/333 (70%), Positives = 282/333 (84%), Gaps = 2/333 (0%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AY+AR +FP+ ++W+TN+IIHNPTV++RL+EM ++ IPV G K VV GDVV+ PA
Sbjct: 143 LAYDARVKFPDRRLWLTNQIIHNPTVSERLDEMGIKIIPVVSGVKDLSVVEDGDVVIFPA 202
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FG V+EMVTLN KNV IVDTTCP V KV E+H KG+YT+IIHGKY+HEETVATASF
Sbjct: 203 FGFTVDEMVTLNRKNVHIVDTTCPLVLKVVHMTERHIKGNYTTIIHGKYAHEETVATASF 262
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
A KYIIVK++ EA+YVCDYIL G+L+GSSSTKE FL+KF+ AVS GFDPD+DL +VG+ N
Sbjct: 263 ADKYIIVKDITEAKYVCDYILEGQLDGSSSTKEKFLKKFRYAVSPGFDPDIDLERVGVVN 322
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVE--NVNEHFISFNTICDATQERQDAMYKMVEEKV 241
QTTMLKGET+EIG L+E+TMM K+G++ N EHF+ TIC+ATQERQDAMYK+VE++V
Sbjct: 323 QTTMLKGETKEIGILIEQTMMSKYGLDQNNKQEHFVRVGTICNATQERQDAMYKLVEKEV 382
Query: 242 DLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLP 301
DLILVVGGWNSSNTSHLQEI E GIPSYW+D E+RIGPGNKI+YK +GELVEK+ WLP
Sbjct: 383 DLILVVGGWNSSNTSHLQEIGELSGIPSYWVDGEQRIGPGNKISYKQKNGELVEKDKWLP 442
Query: 302 KGQITIGITSGASTPDKAVEDVLKKVFEIKREE 334
G ITIG+TSGASTPDK VEDVL+KVFEIKR+E
Sbjct: 443 HGAITIGVTSGASTPDKVVEDVLQKVFEIKRQE 475
>gi|125545617|gb|EAY91756.1| hypothetical protein OsI_13397 [Oryza sativa Indica Group]
Length = 482
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 233/333 (69%), Positives = 281/333 (84%), Gaps = 2/333 (0%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AY+AR +FP+ ++W+TN+IIHNPTV++RL+EM ++ IPV G K VV GDVV+ PA
Sbjct: 143 LAYDARVKFPDRRLWLTNQIIHNPTVSERLDEMGIKIIPVVSGVKDLSVVEDGDVVIFPA 202
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FG V+EMVTLN KNV IVDTTCP V KV E+H KG+YT+IIHGKY+HEETVATASF
Sbjct: 203 FGFTVDEMVTLNRKNVHIVDTTCPLVLKVVHMTERHIKGNYTTIIHGKYAHEETVATASF 262
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
A KYIIVK++ EA+YVCDYIL G+L+GSSSTKE FL+KF+ AVS GFDPD+DL +VG+ N
Sbjct: 263 ADKYIIVKDITEAKYVCDYILEGQLDGSSSTKEKFLKKFRDAVSPGFDPDIDLERVGVVN 322
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVEN--VNEHFISFNTICDATQERQDAMYKMVEEKV 241
QTTMLKGET+EIG L+E+TMM K+G++ EHF+ TIC+ATQERQDAMYK+VE++V
Sbjct: 323 QTTMLKGETKEIGILIEQTMMSKYGLDQNKKQEHFVRVGTICNATQERQDAMYKLVEKEV 382
Query: 242 DLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLP 301
DLILVVGGWNSSNTSHLQEI E GIPSYW+D E+RIGPGNKI+YK +GELVEK+ WLP
Sbjct: 383 DLILVVGGWNSSNTSHLQEIGELSGIPSYWVDGEQRIGPGNKISYKQKNGELVEKDKWLP 442
Query: 302 KGQITIGITSGASTPDKAVEDVLKKVFEIKREE 334
G ITIG+TSGASTPDK VEDVL+KVFEIKR+E
Sbjct: 443 HGAITIGVTSGASTPDKVVEDVLQKVFEIKRQE 475
>gi|411119812|ref|ZP_11392188.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Oscillatoriales cyanobacterium JSC-12]
gi|410709968|gb|EKQ67479.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Oscillatoriales cyanobacterium JSC-12]
Length = 402
Score = 483 bits (1243), Expect = e-134, Method: Compositional matrix adjust.
Identities = 223/328 (67%), Positives = 272/328 (82%), Gaps = 6/328 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R FP E+IWITNEIIHNP+VN+RL EM VQ IPVE+G K F VV+KGDVV+LPA
Sbjct: 75 MAYETRTHFPNERIWITNEIIHNPSVNQRLREMNVQFIPVEQGIKNFSVVDKGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V+EM LN IVDTTCPWVSKVW +VEKHKK YTSIIHGKY+HEET+AT+SF
Sbjct: 135 FGASVQEMQYLNENGCTIVDTTCPWVSKVWNTVEKHKKTQYTSIIHGKYNHEETIATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG Y+IV NM+EAEYV +YIL G + AF+ KF +A S+GFDPD DL ++GIAN
Sbjct: 195 AGTYLIVLNMQEAEYVANYILSG------GDRNAFMAKFNRACSQGFDPDRDLERIGIAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETE+IGKL+E TMM+K+G + +N+HF+SFNTICDATQERQDAM+ +V+EK+DL
Sbjct: 249 QTTMLKGETEQIGKLLEHTMMKKYGPDQLNQHFLSFNTICDATQERQDAMFDLVQEKLDL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQEIA DRGIPSY IDS RI PGN++ +K +H +L NWLP+G
Sbjct: 309 MVVIGGYNSSNTTHLQEIAIDRGIPSYHIDSAARIKPGNQVEHKPLHRDLEVTNNWLPEG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIK 331
ITIG+TSGASTPDK VEDVL+K+FE+K
Sbjct: 369 PITIGVTSGASTPDKVVEDVLEKIFELK 396
>gi|434394564|ref|YP_007129511.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Gloeocapsa sp.
PCC 7428]
gi|428266405|gb|AFZ32351.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Gloeocapsa sp.
PCC 7428]
Length = 407
Score = 473 bits (1217), Expect = e-131, Method: Compositional matrix adjust.
Identities = 220/328 (67%), Positives = 269/328 (82%), Gaps = 6/328 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ FP+E+IWITNEIIHNP+VN+RL EM V I VE+GKK F VV GDVV+LPA
Sbjct: 75 MAYETRQHFPQERIWITNEIIHNPSVNQRLREMQVGFISVEDGKKDFSVVESGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V+EM LN+K IVDTTCPWVSKVW +VEKHKKG+YTSIIHGKY+HEET+AT+SF
Sbjct: 135 FGASVQEMQLLNDKGCTIVDTTCPWVSKVWNTVEKHKKGEYTSIIHGKYNHEETLATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKY+IV N+ +AEYV +YIL G K FL KF +A S GFDPD DL +VGIAN
Sbjct: 195 AGKYLIVLNLAQAEYVANYILNG------GDKNEFLAKFGRACSAGFDPDRDLERVGIAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETE+IGKL E TM++K+G +N+HF SFNTICDATQERQDAM+++VEEK+DL
Sbjct: 249 QTTMLKSETEQIGKLFEHTMLKKYGPTELNDHFQSFNTICDATQERQDAMFELVEEKLDL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQEIA +R IPSY IDS RIGPGN++ ++ + GEL ENWLP+G
Sbjct: 309 MVVIGGFNSSNTTHLQEIAVEREIPSYHIDSADRIGPGNRVEHRQLSGELAVAENWLPEG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIK 331
I IGITSGASTPDK V D+++K+F+IK
Sbjct: 369 AIAIGITSGASTPDKVVADIVQKIFDIK 396
>gi|428208436|ref|YP_007092789.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Chroococcidiopsis thermalis PCC 7203]
gi|428010357|gb|AFY88920.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Chroococcidiopsis thermalis PCC 7203]
Length = 402
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 215/328 (65%), Positives = 268/328 (81%), Gaps = 6/328 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ FP ++IWITNEIIHNP+VN+RL+EM V IPV G K F VV GDV +LPA
Sbjct: 80 MAYETRQHFPTQRIWITNEIIHNPSVNQRLQEMQVGFIPVIAGVKDFSVVESGDVAILPA 139
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V+EM L KN +IVDTTCPWV+KVW +VEKHKK +YTSIIHGKY+HEET+AT+SF
Sbjct: 140 FGASVQEMQLLQEKNCKIVDTTCPWVAKVWNTVEKHKKSEYTSIIHGKYNHEETIATSSF 199
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
A KY++V NM +AEYVC+YIL G ++ F+ KF +A S GF+PD DL KVGIAN
Sbjct: 200 ANKYLVVLNMAQAEYVCNYILNG------GNRDEFMAKFSRACSAGFNPDTDLEKVGIAN 253
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETE+IGKL E+TMMRK+G + +N+HFISFNTICDATQERQDAM+++VEEK+DL
Sbjct: 254 QTTMLKSETEQIGKLFERTMMRKYGPDTLNQHFISFNTICDATQERQDAMFQLVEEKLDL 313
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQEIA + IPSY IDS RIG N+I ++L+ GE+V ENWLP G
Sbjct: 314 MVVIGGFNSSNTTHLQEIAIEHQIPSYHIDSANRIGTANQIEHRLLSGEIVATENWLPSG 373
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIK 331
+IT+GITSGASTPDK V DV++K+F +K
Sbjct: 374 KITVGITSGASTPDKVVADVVEKIFALK 401
>gi|220907762|ref|YP_002483073.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Cyanothece sp.
PCC 7425]
gi|254806902|sp|B8HWD3.1|ISPH_CYAP4 RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|219864373|gb|ACL44712.1| hydroxymethylbutenyl pyrophosphate reductase [Cyanothece sp. PCC
7425]
Length = 405
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 218/329 (66%), Positives = 269/329 (81%), Gaps = 7/329 (2%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV-EEGKKQFDVVNKGDVVVLP 62
+AYE R+ FP E+IWITNEIIHNP+VN+ L EM V+ IPV E+G+K F VV DVV+LP
Sbjct: 75 LAYETRQHFPTERIWITNEIIHNPSVNQNLREMQVEFIPVDEQGQKDFSVVAGEDVVILP 134
Query: 63 AFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATAS 122
AFGA+V+EM LN+K +I+DTTCPWVSKVW SVEKHKKG YTSIIHGKY HEET+AT+S
Sbjct: 135 AFGASVQEMQLLNDKGCKIMDTTCPWVSKVWNSVEKHKKGSYTSIIHGKYQHEETIATSS 194
Query: 123 FAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIA 182
+A Y+IV ++KEAEYVC+YIL G +E FL KF+ A S FDPD DLV+VGIA
Sbjct: 195 YAATYLIVLDLKEAEYVCNYILNG------GDREEFLHKFRHAYSPDFDPDRDLVRVGIA 248
Query: 183 NQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVD 242
NQTTMLKGETE+IGKL E+T+MRK+G + +N+HF+SFNTICDATQERQDAM+K+VE +D
Sbjct: 249 NQTTMLKGETEQIGKLFERTLMRKYGPDQINQHFLSFNTICDATQERQDAMFKLVEYPLD 308
Query: 243 LILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPK 302
L++V+GG+NSSNT+HLQEI+ +R IPSY IDS RIGPGN++ +K +H L KENWLP+
Sbjct: 309 LMVVIGGFNSSNTTHLQEISIEREIPSYHIDSADRIGPGNRVEHKPLHRPLEIKENWLPE 368
Query: 303 GQITIGITSGASTPDKAVEDVLKKVFEIK 331
G I +GITSGASTPDK V DVL+K+F +K
Sbjct: 369 GPIVVGITSGASTPDKVVSDVLEKIFALK 397
>gi|428300713|ref|YP_007139019.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Calothrix sp.
PCC 6303]
gi|428237257|gb|AFZ03047.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Calothrix sp.
PCC 6303]
Length = 402
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 218/328 (66%), Positives = 267/328 (81%), Gaps = 6/328 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE RK FP E+IWITNEIIHNP+VN+RL EM VQ IP+ G K F VV GDVV+LPA
Sbjct: 75 MAYETRKHFPTEQIWITNEIIHNPSVNQRLREMHVQFIPMVAGNKDFSVVGSGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V+EM LN KN +IVDTTCPWVSKVW +VEKHKKG YTSIIHGKY+HEET+AT+SF
Sbjct: 135 FGASVQEMQILNEKNCKIVDTTCPWVSKVWNTVEKHKKGAYTSIIHGKYAHEETIATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKY+IV NMK+AEYV +YIL G K F+ KF + S GFDPD+DL +VGIAN
Sbjct: 195 AGKYLIVLNMKQAEYVANYILNG------GDKNEFMAKFSNSFSSGFDPDIDLERVGIAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETEEIGKL E+TM++K+G +N+N+HF SFNTICDATQERQDAM+++VEEK DL
Sbjct: 249 QTTMLKGETEEIGKLFERTMIKKYGPQNLNQHFQSFNTICDATQERQDAMFELVEEKADL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQEIA +R +PSY ID +RI + I ++ ++GELV E WLP G
Sbjct: 309 MVVIGGFNSSNTTHLQEIAVERQLPSYHIDCVERIKSRDAIEHQQLNGELVITEKWLPDG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIK 331
+I +GITSGASTPDK VEDV+ ++F +K
Sbjct: 369 EIIVGITSGASTPDKVVEDVINRIFALK 396
>gi|300864234|ref|ZP_07109117.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Oscillatoria
sp. PCC 6506]
gi|300337771|emb|CBN54263.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Oscillatoria
sp. PCC 6506]
Length = 397
Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust.
Identities = 218/328 (66%), Positives = 270/328 (82%), Gaps = 6/328 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYE R+ FP E+IWITNEIIHNP+VN+ L +M V+ IPVE+ +K F VV++GDVV+LPA
Sbjct: 75 IAYETRQHFPTERIWITNEIIHNPSVNQHLVDMQVEFIPVEKSEKDFSVVDRGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V+EM TLN+K +IVDTTCPWVSKVW +VEKHKK TSIIHGKY+HEETVAT+SF
Sbjct: 135 FGASVQEMQTLNDKGCKIVDTTCPWVSKVWNTVEKHKKKVCTSIIHGKYNHEETVATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKY+IV N++EAEYVC+YIL G +E FL KF KA S GFDPD DL +VGIAN
Sbjct: 195 AGKYLIVLNLREAEYVCNYILNG------GDREEFLAKFSKACSAGFDPDRDLEQVGIAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETE+IGKL EKTMMRK+G + +NEHF SFNTICDATQERQDAM+ +VEEK+DL
Sbjct: 249 QTTMLKSETEQIGKLFEKTMMRKYGPDKLNEHFQSFNTICDATQERQDAMFSLVEEKLDL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
+LV+GG+NSSNT+HLQE+A +R +PSY ID+ +RI N+I +K + +L +NWLP G
Sbjct: 309 MLVIGGFNSSNTTHLQEMAVERKLPSYHIDAAERILANNRIEHKPLGSDLAIADNWLPTG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIK 331
+I +G+TSGASTPDK VED +K++FE+K
Sbjct: 369 KIVVGVTSGASTPDKVVEDAIKRIFEMK 396
>gi|56751440|ref|YP_172141.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
elongatus PCC 6301]
gi|81298884|ref|YP_399092.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
elongatus PCC 7942]
gi|71152197|sp|Q5N249.1|ISPH_SYNP6 RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|123557655|sp|Q31S64.1|ISPH_SYNE7 RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|56686399|dbj|BAD79621.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
elongatus PCC 6301]
gi|81167765|gb|ABB56105.1| hydroxymethylbutenyl pyrophosphate reductase [Synechococcus
elongatus PCC 7942]
Length = 398
Score = 466 bits (1198), Expect = e-129, Method: Compositional matrix adjust.
Identities = 208/329 (63%), Positives = 273/329 (82%), Gaps = 6/329 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYE R+ FP+E+IWITNEIIHNP+VN+ L EM+V+ IP E G+K F VV++GDVV+LPA
Sbjct: 75 IAYETRQHFPQERIWITNEIIHNPSVNQHLREMSVEFIPCERGEKDFSVVDRGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V+EM L+ K IVDTTCPWVSKVW +VEKHK+G +TSIIHGKY+HEETVAT+SF
Sbjct: 135 FGASVQEMQLLDEKGCHIVDTTCPWVSKVWNTVEKHKRGAHTSIIHGKYNHEETVATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
A Y++V N+++A+YVCDYIL G ++ F+ +F KA S GFDPD DL ++GIAN
Sbjct: 195 AETYLVVLNLEQAQYVCDYILNG------GDRDEFMTRFGKACSAGFDPDRDLERIGIAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETE IGKL E+T+++K+G + +N+HF++FNTICDATQERQDAM+++VEE +DL
Sbjct: 249 QTTMLKSETEAIGKLFERTLLKKYGPQALNDHFLAFNTICDATQERQDAMFQLVEEPLDL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
I+V+GG+NSSNT+HLQEIA +R IPS+ ID+ +RIGPGN+I +K +H +L E WLP G
Sbjct: 309 IVVIGGFNSSNTTHLQEIAIERQIPSFHIDAAERIGPGNRIEHKPLHTDLTTTEPWLPAG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKR 332
+TIGITSGASTPDK VEDV++++F+++R
Sbjct: 369 PLTIGITSGASTPDKVVEDVIERLFDLQR 397
>gi|427728356|ref|YP_007074593.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase [Nostoc
sp. PCC 7524]
gi|427364275|gb|AFY46996.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase [Nostoc
sp. PCC 7524]
Length = 402
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 215/328 (65%), Positives = 270/328 (82%), Gaps = 6/328 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE RK FP E+IWITNEIIHNP+VN R++EM V IPV+ GKK F VV DVV+LPA
Sbjct: 75 MAYETRKHFPTERIWITNEIIHNPSVNHRMQEMQVGFIPVDGGKKDFSVVGNKDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V+EM LN+K QIVDTTCPWVSKVW +VEKHKKG+YTSIIHGKY HEET+AT+SF
Sbjct: 135 FGASVQEMQILNDKGCQIVDTTCPWVSKVWNTVEKHKKGEYTSIIHGKYKHEETIATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKY+IV N+KEA+YV DYIL G +E FL+KF KA S GFDPD DL +VGIAN
Sbjct: 195 AGKYLIVLNLKEAQYVADYILHG------GDREEFLQKFAKACSAGFDPDQDLERVGIAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETE+IGKL E+TMM+K+G +N+HF SFNTICDATQERQDAM ++V++K+DL
Sbjct: 249 QTTMLKGETEQIGKLFERTMMQKYGPAELNQHFQSFNTICDATQERQDAMLELVKDKLDL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+ LQ+I+++RG+PSY IDS +RI I ++ + G+LV ENWLP+G
Sbjct: 309 MIVIGGFNSSNTTQLQQISQERGLPSYHIDSVERIKSRTSIEHRQLTGDLVISENWLPEG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIK 331
+I +G+TSGASTPDK VED+++K+F +K
Sbjct: 369 EIVVGVTSGASTPDKVVEDIIEKIFTLK 396
>gi|307153041|ref|YP_003888425.1| hydroxymethylbutenyl pyrophosphate reductase [Cyanothece sp. PCC
7822]
gi|306983269|gb|ADN15150.1| hydroxymethylbutenyl pyrophosphate reductase [Cyanothece sp. PCC
7822]
Length = 401
Score = 462 bits (1190), Expect = e-128, Method: Compositional matrix adjust.
Identities = 219/328 (66%), Positives = 266/328 (81%), Gaps = 6/328 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
++YE R+ FP ++IW+TNE+IHNP+VN+RL EM V+ IPV EG+K F VV DVV+LPA
Sbjct: 75 MSYETRQHFPSQRIWLTNEVIHNPSVNQRLREMKVEFIPVIEGQKDFSVVEGNDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V EM LN+K IVDTTCPWV+KVW SVEKHKK YTSIIHGKY HEETVAT+SF
Sbjct: 135 FGASVSEMQLLNDKGCTIVDTTCPWVAKVWNSVEKHKKRSYTSIIHGKYKHEETVATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG Y+IV NM++AEYVC+YIL G K+ FL KFKKA S GFDPDVDL ++GIAN
Sbjct: 195 AGTYLIVLNMEQAEYVCNYILNG------GDKQEFLAKFKKAYSAGFDPDVDLERIGIAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETEEIGKL E+TM++KFG +NEHF+SFNTICDATQERQDAM+ +V+E++DL
Sbjct: 249 QTTMLKSETEEIGKLFERTMLKKFGPTVLNEHFMSFNTICDATQERQDAMFDLVKEELDL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++VVGG+NSSNT+HLQEI + GI SY IDS RIGPGN+I +K + +L KENWLP G
Sbjct: 309 MVVVGGFNSSNTTHLQEIPINEGIVSYHIDSASRIGPGNRIEHKPLLKDLEVKENWLPDG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIK 331
++ IG+TSGASTPD VE VL+K+FEIK
Sbjct: 369 KVVIGVTSGASTPDIVVEQVLEKIFEIK 396
>gi|428200976|ref|YP_007079565.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pleurocapsa sp. PCC 7327]
gi|427978408|gb|AFY76008.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pleurocapsa sp. PCC 7327]
Length = 402
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 215/328 (65%), Positives = 264/328 (80%), Gaps = 6/328 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ FP E+IWITNEIIHNP+VN+RL+EM V I V +GKK F V GDVV+LPA
Sbjct: 75 MAYETRQHFPTERIWITNEIIHNPSVNQRLQEMEVGFISVVDGKKDFSAVESGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V EM LN+K IVDTTCPWVSKVW SVEKHKK DYTSIIHGKY+HEET+AT+SF
Sbjct: 135 FGASVAEMQLLNDKGCTIVDTTCPWVSKVWNSVEKHKKRDYTSIIHGKYNHEETIATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG Y++V N+++A YVCDYIL G +E FL KFK A S+GFDPD DL ++GIAN
Sbjct: 195 AGTYLVVLNLEQANYVCDYILNG------GNREEFLTKFKNAYSEGFDPDRDLEQIGIAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETE+IGKL E+TM++K+G ++ HF+SFNTICDATQERQDAM+ +VEE + L
Sbjct: 249 QTTMLKSETEQIGKLFERTMLKKYGPTELDRHFMSFNTICDATQERQDAMFNLVEENLTL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
+LV+GG+NSSNT+HLQEIA +RGIPSY IDS RIGPGN+I +K + +L ENWLP G
Sbjct: 309 MLVIGGYNSSNTTHLQEIAIERGIPSYHIDSAARIGPGNRIEHKPLGKDLEVTENWLPDG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIK 331
I +G+TSGASTPDK VE+ ++K+FE+K
Sbjct: 369 SIVVGVTSGASTPDKIVEEAIEKIFELK 396
>gi|428313091|ref|YP_007124068.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Microcoleus sp. PCC 7113]
gi|428254703|gb|AFZ20662.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Microcoleus sp. PCC 7113]
Length = 401
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 214/328 (65%), Positives = 268/328 (81%), Gaps = 6/328 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYEAR+ FP E+IW+TNEIIHNP+VN+RL+EM V IPV+ GKK F VV+ GDVV+LPA
Sbjct: 75 MAYEARQHFPTERIWMTNEIIHNPSVNQRLQEMEVGFIPVQGGKKDFSVVDSGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V+EM LN+KN +IVDTTCPWVSKVW +VEKHKK DYTSIIHGKY HEETVAT+SF
Sbjct: 135 FGASVQEMQLLNDKNCKIVDTTCPWVSKVWNTVEKHKKKDYTSIIHGKYKHEETVATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKY++V N+KEAEYV DYIL G ++ F+ KF +A S GFDPD DL ++GIAN
Sbjct: 195 AGKYLVVLNLKEAEYVADYILHG------GNRDEFMTKFSRACSSGFDPDRDLEQIGIAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETE+IGKL E+TMM+K+G ++N HF SFNTICDATQERQDAM +VE+K+DL
Sbjct: 249 QTTMLKSETEQIGKLFERTMMKKYGPTDLNNHFHSFNTICDATQERQDAMLGLVEQKLDL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+ LQ+IA +RGIPSY IDS RIG N++ +K + +L +NWLP G
Sbjct: 309 MVVIGGFNSSNTTQLQQIAIERGIPSYHIDSAARIGSENQVEHKPLGRDLEMTQNWLPAG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIK 331
+I +G+TSGASTPDK VED ++K+F +K
Sbjct: 369 KIVVGVTSGASTPDKVVEDAIEKIFALK 396
>gi|427713930|ref|YP_007062554.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Synechococcus sp. PCC 6312]
gi|427378059|gb|AFY62011.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Synechococcus sp. PCC 6312]
Length = 411
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 216/328 (65%), Positives = 263/328 (80%), Gaps = 6/328 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ FP ++IWITNEIIHNP+VN+RL +MAV+ IPV K F V GDVV+LPA
Sbjct: 75 LAYETRQHFPTQRIWITNEIIHNPSVNQRLRDMAVEFIPVVPDGKDFSEVGPGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V+EM LN + IVDTTCPWVSKVW SVEKHKKG YTSIIHGKY+HEETVAT+SF
Sbjct: 135 FGASVQEMQLLNERGCTIVDTTCPWVSKVWNSVEKHKKGSYTSIIHGKYNHEETVATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG Y+I+ NM EAEYVCDYIL G + FL KF+ A S GFDPD DLV++GIAN
Sbjct: 195 AGTYLILLNMDEAEYVCDYILNG------GDRVEFLAKFQNAYSLGFDPDRDLVRLGIAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETE++GKL E T++RK+G + +N HF+SFNTICDATQERQDAM+K+VEE +DL
Sbjct: 249 QTTMLKGETEQMGKLFEHTLIRKYGPDQINHHFLSFNTICDATQERQDAMFKLVEEPLDL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
I+V+GG+NSSNT+HLQEIA + IPSY ID+ +RIGPGN++ +K + +L ENWLP G
Sbjct: 309 IVVIGGYNSSNTTHLQEIAVEWNIPSYHIDAAERIGPGNRVEHKPLKQDLEVTENWLPPG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIK 331
+TIGITSGASTPDK V DVL+++F K
Sbjct: 369 PLTIGITSGASTPDKVVADVLERIFSFK 396
>gi|75909159|ref|YP_323455.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Anabaena
variabilis ATCC 29413]
gi|123609130|sp|Q3M8X6.1|ISPH_ANAVT RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|75702884|gb|ABA22560.1| LytB protein [Anabaena variabilis ATCC 29413]
Length = 402
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 215/333 (64%), Positives = 269/333 (80%), Gaps = 6/333 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE RK FP E+IWITNEIIHNP+VN+R++EM V IPVE G K F VV DVV+LPA
Sbjct: 75 MAYETRKHFPTERIWITNEIIHNPSVNQRMQEMQVGFIPVEAGNKDFSVVGNNDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V+EM L+ K +IVDTTCPWVSKVW +VEKHKKGD+TSIIHGKY HEET+AT+SF
Sbjct: 135 FGASVQEMQLLSEKGCKIVDTTCPWVSKVWNTVEKHKKGDHTSIIHGKYKHEETIATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKY+IV N+KEA+YV DYIL G +E FL+KF KA S GFDPD DL +VGIAN
Sbjct: 195 AGKYLIVLNLKEAQYVADYILHGR------NREEFLQKFAKACSAGFDPDKDLERVGIAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETE+IGKL E TM++K+G +N+HF SFNTICDATQERQDAM ++V+E +DL
Sbjct: 249 QTTMLKGETEQIGKLFEHTMLQKYGPVELNQHFQSFNTICDATQERQDAMLELVQENLDL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+ LQ+I+++RG+PSY ID +RI N I ++ ++GELV ENWLP G
Sbjct: 309 MIVIGGFNSSNTTQLQQISQERGLPSYHIDVVERIKSVNSIEHRQLNGELVTTENWLPAG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEAL 336
+I +G+TSGASTPDK VEDV++K+F +K A+
Sbjct: 369 KIVVGVTSGASTPDKVVEDVIEKIFALKATTAV 401
>gi|282895457|ref|ZP_06303594.1| LytB protein [Raphidiopsis brookii D9]
gi|281199490|gb|EFA74353.1| LytB protein [Raphidiopsis brookii D9]
Length = 415
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 216/328 (65%), Positives = 269/328 (82%), Gaps = 6/328 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ FP+E+IWITNEIIHNP+VN+R++EM V IPV KK F VV +GDVV+LPA
Sbjct: 93 MAYETRQHFPKERIWITNEIIHNPSVNQRMQEMGVGFIPVTANKKDFSVVEQGDVVILPA 152
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V+EM L++K+ QIVDTTCPWVSKVW +VEKHKKG++TSIIHGKY HEETVAT+SF
Sbjct: 153 FGASVQEMQILHDKSCQIVDTTCPWVSKVWNTVEKHKKGEFTSIIHGKYKHEETVATSSF 212
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKY+IV N+KEAEYV +YIL G +E FL KF KA S GFDPD DL KVGIAN
Sbjct: 213 AGKYLIVLNLKEAEYVSNYILHG------GDREEFLTKFAKACSAGFDPDKDLEKVGIAN 266
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETE+IGK+ EKTMM+K+G+ +N HF SFNTICDATQERQDAM ++VE+K+DL
Sbjct: 267 QTTMLKGETEQIGKIFEKTMMQKYGILALNNHFQSFNTICDATQERQDAMLELVEDKLDL 326
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
I+V+GG+NSSNT+ LQ+IA +R IPSY IDS RI P N I ++ ++GE+ +NWLP G
Sbjct: 327 IIVIGGFNSSNTTQLQQIAINRNIPSYHIDSVDRIKPSNAIEHRQLNGEIAITKNWLPIG 386
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIK 331
+ +G+TSGASTPDK VED+++K+F +K
Sbjct: 387 ETIVGVTSGASTPDKVVEDIIEKIFSLK 414
>gi|17228480|ref|NP_485028.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nostoc sp. PCC
7120]
gi|20138568|sp|P58674.1|ISPH_ANASP RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|17130331|dbj|BAB72942.1| all0985 [Nostoc sp. PCC 7120]
Length = 402
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 215/333 (64%), Positives = 269/333 (80%), Gaps = 6/333 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE RK FP E+IWITNEIIHNP+VN+R++EM V IPVE G K F VV DVV+LPA
Sbjct: 75 MAYETRKHFPTERIWITNEIIHNPSVNQRMQEMQVGFIPVEAGNKDFSVVGNNDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V+EM L+ K +IVDTTCPWVSKVW +VEKHKKGD+TSIIHGKY HEET+AT+SF
Sbjct: 135 FGASVQEMQLLSEKGCKIVDTTCPWVSKVWNTVEKHKKGDHTSIIHGKYKHEETIATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKY+IV N+KEA+YV DYIL G +E FL+KF KA S GFDPD DL +VGIAN
Sbjct: 195 AGKYLIVLNLKEAQYVADYILHG------GNREEFLQKFAKACSAGFDPDRDLERVGIAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETE+IGKL E TM++K+G +N+HF SFNTICDATQERQDAM ++V+E +DL
Sbjct: 249 QTTMLKGETEQIGKLFEHTMLQKYGPVELNQHFQSFNTICDATQERQDAMLELVQENLDL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+ LQ+I+++RG+PSY ID +RI N I ++ ++GELV ENWLP G
Sbjct: 309 MIVIGGFNSSNTTQLQQISQERGLPSYHIDVVERIKSINSIEHRQLNGELVTTENWLPAG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEAL 336
+I +G+TSGASTPDK VEDV++K+F +K A+
Sbjct: 369 KIVVGVTSGASTPDKVVEDVIEKIFALKATAAV 401
>gi|428770960|ref|YP_007162750.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Cyanobacterium
aponinum PCC 10605]
gi|428685239|gb|AFZ54706.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Cyanobacterium
aponinum PCC 10605]
Length = 398
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 223/328 (67%), Positives = 264/328 (80%), Gaps = 6/328 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R FP EKIWITNEIIHNP+VNKRL EM V IPV+ G K F VVN +VV+LPA
Sbjct: 75 MAYETRTHFPTEKIWITNEIIHNPSVNKRLREMNVDFIPVDNGVKDFSVVNPKEVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V EM LN+K IVDTTCPWVSKVW SVEKHKK +YTSIIHGKY HEETVAT+SF
Sbjct: 135 FGASVSEMQLLNDKGCTIVDTTCPWVSKVWNSVEKHKKKEYTSIIHGKYKHEETVATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG Y++V NMKEA+YVC+YIL G K FL KFK A S+GFDPDVDLV+VGIAN
Sbjct: 195 AGTYLVVLNMKEAQYVCNYILNG------GDKLEFLNKFKNAYSEGFDPDVDLVRVGIAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETE IGKL E+TM++K+ +N+HF+SFNTICDATQERQDAM +VEEK+DL
Sbjct: 249 QTTMLKSETEAIGKLFEQTMIKKYNPAELNQHFMSFNTICDATQERQDAMLDLVEEKLDL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQEIA + IPSY IDS RI GN+I YK + +L +ENWLP+G
Sbjct: 309 MVVIGGFNSSNTTHLQEIAIENQIPSYHIDSCDRILEGNRIEYKPLDKDLEIQENWLPEG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIK 331
+IT+GITSGASTPDK VEDV++K+F +K
Sbjct: 369 KITVGITSGASTPDKVVEDVIEKIFALK 396
>gi|298490498|ref|YP_003720675.1| hydroxymethylbutenyl pyrophosphate reductase ['Nostoc azollae'
0708]
gi|298232416|gb|ADI63552.1| hydroxymethylbutenyl pyrophosphate reductase ['Nostoc azollae'
0708]
Length = 398
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 214/328 (65%), Positives = 269/328 (82%), Gaps = 6/328 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ FP+E+IWITNEIIHNP+VN+R++EM VQ IPVE KK F ++++GDVV+LPA
Sbjct: 75 MAYETRQHFPKERIWITNEIIHNPSVNQRMQEMQVQFIPVEANKKDFSLIDQGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V+EM LN+K QIVDTTCPWVSKVW +VEKHKKG+YTSIIHGKY HEETVAT+SF
Sbjct: 135 FGASVQEMQILNDKGCQIVDTTCPWVSKVWNTVEKHKKGEYTSIIHGKYKHEETVATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKY+IV N++EAEYV +YIL G+ +E FL KF KA S GFDP+ DL +VGIAN
Sbjct: 195 AGKYLIVLNLQEAEYVINYILNGD------KREEFLAKFAKACSAGFDPEKDLERVGIAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETE+I KL EKTMM+K+G +N+HF SFNTICDATQERQDAM ++VE +DL
Sbjct: 249 QTTMLKGETEKIAKLFEKTMMQKYGPAELNQHFQSFNTICDATQERQDAMLELVENNLDL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+ LQ+IA R IPSY ID+ +RI GN I ++ + GEL+ ENWLP
Sbjct: 309 MVVIGGFNSSNTTQLQQIAFGRNIPSYHIDAVERIKSGNAIEHRQLTGELITTENWLPPR 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIK 331
+I +GITSGASTPDK VED+++++F +K
Sbjct: 369 EIVVGITSGASTPDKVVEDIIERIFTLK 396
>gi|334117044|ref|ZP_08491136.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microcoleus
vaginatus FGP-2]
gi|333461864|gb|EGK90469.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microcoleus
vaginatus FGP-2]
Length = 401
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 219/328 (66%), Positives = 263/328 (80%), Gaps = 6/328 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYE R+ FP E+IWITNEIIHNP+VN+ L +M V I VE+G+K F VV+ GDVV+LPA
Sbjct: 75 IAYETRQHFPSERIWITNEIIHNPSVNQHLRDMEVGFISVEKGQKDFSVVDSGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V+EM LN+K +IVDTTCPWVSKVW +VEKHKK +YTSIIHG+Y HEETVAT+SF
Sbjct: 135 FGASVQEMQLLNDKGCKIVDTTCPWVSKVWNTVEKHKKRNYTSIIHGQYKHEETVATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
A KY+IV N +EAEYV +YIL G ++ F+ KF KA S GFDPDVDL VGIAN
Sbjct: 195 ADKYLIVLNFQEAEYVSNYILHG------GDRDEFIAKFSKAYSAGFDPDVDLESVGIAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETE IGKL EKTMMRKFG EN+NEHF SFNTICDATQERQDAM +VEEK+DL
Sbjct: 249 QTTMLKTETENIGKLFEKTMMRKFGPENLNEHFQSFNTICDATQERQDAMLSLVEEKLDL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
+LV+GG+NSSNT+HLQEIA D+ +PSY ID +RI PGN+I +K + G+LV E WLP G
Sbjct: 309 MLVIGGFNSSNTTHLQEIAIDKTVPSYHIDCAERILPGNRIEHKPLGGDLVVTEGWLPDG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIK 331
+I +G+TSGASTPDK VED + ++ +K
Sbjct: 369 KIVVGVTSGASTPDKVVEDAIDRILAMK 396
>gi|428215092|ref|YP_007088236.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Oscillatoria acuminata PCC 6304]
gi|428003473|gb|AFY84316.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Oscillatoria acuminata PCC 6304]
Length = 401
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 218/328 (66%), Positives = 264/328 (80%), Gaps = 6/328 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYE R+ FP E+IWITNEIIHNP+VN+ ++EM V+ IPV+EGKK F+VV GDVV+LPA
Sbjct: 75 IAYETRQHFPTERIWITNEIIHNPSVNQHIQEMNVEFIPVDEGKKDFEVVQAGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA V+EM LN+K IVDTTCPWVSKVW SVEKHKKG+YTSIIHGKY HEET+AT+SF
Sbjct: 135 FGATVQEMQLLNDKGCTIVDTTCPWVSKVWNSVEKHKKGNYTSIIHGKYKHEETLATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG Y+IV NM EAEYV +YIL G K F+ KF KAVS GFDPD DL +VGIAN
Sbjct: 195 AGTYLIVLNMAEAEYVANYILKG------GDKAEFMAKFSKAVSSGFDPDRDLEQVGIAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETE++GKL E+TMM+K+G +N+HF++FNTICDATQERQDAM +VE++VD
Sbjct: 249 QTTMLKSETEQMGKLFERTMMKKYGPAALNQHFLAFNTICDATQERQDAMLDLVEDEVDA 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
I+V+GG+NSSNT+ LQ+IA DRGIPSY IDS RI PGN+I +K ++ EL ENWLP G
Sbjct: 309 IVVIGGYNSSNTTQLQQIAIDRGIPSYHIDSASRILPGNRIEHKPLYQELEIAENWLPPG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIK 331
+ IG+TSGASTPDK VE+ ++K+F K
Sbjct: 369 PLVIGVTSGASTPDKVVEEAIEKIFASK 396
>gi|434402704|ref|YP_007145589.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Cylindrospermum stagnale PCC 7417]
gi|428256959|gb|AFZ22909.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Cylindrospermum stagnale PCC 7417]
Length = 402
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 217/328 (66%), Positives = 266/328 (81%), Gaps = 6/328 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ FP E+IWITNEIIHNP+VN+R++EM V+ IPV+ KK F VV GDVV+LPA
Sbjct: 75 MAYETRQHFPSERIWITNEIIHNPSVNQRMQEMEVEFIPVDAHKKDFSVVTTGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V+EM L++K +IVDTTCPWVSKVW +VEKHKK DYTSIIHGKY HEETVAT+SF
Sbjct: 135 FGASVQEMQILHDKGCKIVDTTCPWVSKVWNTVEKHKKVDYTSIIHGKYKHEETVATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKY+IV N+ EAEYV +YIL G +E FL KF KA S GFDPD DL +VGIAN
Sbjct: 195 AGKYLIVLNLSEAEYVANYILNG------GNREEFLAKFPKACSAGFDPDQDLERVGIAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETE+IGKL E+TMM+K+G +N+HF SFNTICDATQERQDA+ +V++ +DL
Sbjct: 249 QTTMLKGETEQIGKLFERTMMQKYGPTELNQHFQSFNTICDATQERQDAILDLVQQNLDL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+ LQ+IA DRGIPSY ID +RI GN I ++ + G+LV ENWLP G
Sbjct: 309 MVVIGGFNSSNTTQLQQIAFDRGIPSYHIDVVERIKSGNAIEHRQLKGDLVITENWLPAG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIK 331
IT+GITSGASTPDK VEDV++K+F +K
Sbjct: 369 NITVGITSGASTPDKVVEDVIEKIFVLK 396
>gi|428319099|ref|YP_007116981.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Oscillatoria
nigro-viridis PCC 7112]
gi|428242779|gb|AFZ08565.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Oscillatoria
nigro-viridis PCC 7112]
Length = 401
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 219/328 (66%), Positives = 262/328 (79%), Gaps = 6/328 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYE R+ FP E+IWITNEIIHNP+VN+ L +M V IPVE+G+K F VV+ GDVV+LPA
Sbjct: 75 IAYETRQHFPSERIWITNEIIHNPSVNQHLRDMEVGFIPVEKGQKDFSVVDSGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V+EM LN+K +IVDTTCPWVSKVW +VEKHKK DYTSIIHG+Y HEETVAT+SF
Sbjct: 135 FGASVQEMQLLNDKGCKIVDTTCPWVSKVWNTVEKHKKKDYTSIIHGQYKHEETVATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
A KY+IV N +EAEYV +YIL G ++ FL KF KA S GFDPD DL VGIAN
Sbjct: 195 ADKYLIVLNWQEAEYVSNYILHG------GDRDEFLAKFSKAYSAGFDPDRDLEMVGIAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETE IGKL E+TMMRKFG EN++EHF SFNTICDATQERQDAM +V+EK+DL
Sbjct: 249 QTTMLKTETENIGKLFERTMMRKFGPENLSEHFQSFNTICDATQERQDAMLSLVDEKLDL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
+LV+GG+NSSNT+HLQEIA D+ +PSY ID +RI PGN+I +K + +LV E WLP G
Sbjct: 309 MLVIGGFNSSNTTHLQEIAIDKTVPSYHIDCAERILPGNRIEHKPLGADLVVTEGWLPDG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIK 331
QI +G+TSGASTPDK VED + ++F K
Sbjct: 369 QIVVGVTSGASTPDKVVEDAIDRIFATK 396
>gi|428226838|ref|YP_007110935.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Geitlerinema
sp. PCC 7407]
gi|427986739|gb|AFY67883.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Geitlerinema
sp. PCC 7407]
Length = 402
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 214/328 (65%), Positives = 266/328 (81%), Gaps = 6/328 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ FP E++WITNEIIHNP+VN RL EM V IPVE+G+K F +V GDVV+LPA
Sbjct: 75 MAYETRQHFPTERLWITNEIIHNPSVNNRLREMEVGFIPVEQGQKDFSIVAPGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V+EM LN+K IVDTTCPWVSKVW SVEKHKK YTSIIHGKY+HEET+AT+SF
Sbjct: 135 FGASVQEMQVLNDKGCTIVDTTCPWVSKVWNSVEKHKKVQYTSIIHGKYNHEETIATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKY++V NM EA+YV YIL G ++AF+ KF K+ S GFDPD DL +VGIAN
Sbjct: 195 AGKYLVVLNMAEAQYVTHYILHG------GDRDAFMTKFAKSCSAGFDPDRDLERVGIAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETE++GKL E+TMM+K+G EN+NEHF SFNTICDATQERQDAM ++VEEK+DL
Sbjct: 249 QTTMLKSETEQVGKLFERTMMQKYGPENLNEHFQSFNTICDATQERQDAMLQLVEEKLDL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQEIA +R IPSY IDS +RIGPGN++ +K + +L WLP+G
Sbjct: 309 MVVIGGYNSSNTTHLQEIAVERHIPSYHIDSAERIGPGNQVEHKPLERDLEIATPWLPEG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIK 331
I +G+TSGASTPDK V +V++K+F +K
Sbjct: 369 PIVVGVTSGASTPDKVVSEVIEKIFALK 396
>gi|359458726|ref|ZP_09247289.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Acaryochloris
sp. CCMEE 5410]
Length = 415
Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust.
Identities = 214/335 (63%), Positives = 273/335 (81%), Gaps = 3/335 (0%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE-EGKKQFDVVNKGDVVVLP 62
+AYE R+QFP+E+IWITNEIIHNP+VNK L +M V+ IPV+ +G+K F VV + DVV+LP
Sbjct: 75 LAYETRRQFPQERIWITNEIIHNPSVNKNLRDMKVEFIPVQPDGQKDFTVVGQNDVVILP 134
Query: 63 AFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATAS 122
AFGA+V+EM L++K I+DTTCPWVSKVWTSVEKHKKG YTSIIHGKY HEET+AT+S
Sbjct: 135 AFGASVQEMQLLHDKGCTIMDTTCPWVSKVWTSVEKHKKGAYTSIIHGKYKHEETIATSS 194
Query: 123 FAGKYIIVKNMKEAEYVCDYILG-GELNGSSSTKEA-FLEKFKKAVSKGFDPDVDLVKVG 180
FAG Y+I+ N++EAEYV DYIL G+ + A F+ KF A S GFDP+ DL +VG
Sbjct: 195 FAGTYLILLNLEEAEYVADYILNPGDTPSEREQRRADFMAKFANAHSPGFDPETDLERVG 254
Query: 181 IANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEK 240
IANQTTMLKGETE+IGKL E+T+MRK+G VNEHF+SFNTICDATQERQDA++++V+E
Sbjct: 255 IANQTTMLKGETEQIGKLFERTVMRKYGPAQVNEHFLSFNTICDATQERQDAIFQLVDEP 314
Query: 241 VDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWL 300
+DL++V+GG+NSSNT+HLQEI+ D+ IPSY IDS RIGPGN++ +K ++ +L +NWL
Sbjct: 315 LDLMVVIGGFNSSNTTHLQEISIDKNIPSYHIDSVDRIGPGNRVEHKPLNADLTVTDNWL 374
Query: 301 PKGQITIGITSGASTPDKAVEDVLKKVFEIKREEA 335
PKG + IG+TSGASTPDK V D+++K+F IK A
Sbjct: 375 PKGPLAIGVTSGASTPDKVVSDIVEKIFSIKSASA 409
>gi|126660191|ref|ZP_01731309.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Cyanothece sp.
CCY0110]
gi|126618556|gb|EAZ89307.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Cyanothece sp.
CCY0110]
Length = 402
Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust.
Identities = 223/333 (66%), Positives = 266/333 (79%), Gaps = 6/333 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ FP+EKIWITNEIIHNP+VN+RL EM V I V G K F VV GDVV+LPA
Sbjct: 75 MAYETRQHFPQEKIWITNEIIHNPSVNQRLLEMNVGFIEVVNGNKNFSVVETGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V EM LN+K IVDTTCPWVSKVW SVEKHKK DYTSIIHGKY HEETVAT+SF
Sbjct: 135 FGASVTEMQLLNDKGCTIVDTTCPWVSKVWNSVEKHKKKDYTSIIHGKYRHEETVATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG Y++V N KEA+YVCDYIL G K+ FLEKFK A S+GF+PD DL+++GIAN
Sbjct: 195 AGTYLVVLNFKEAQYVCDYILNG------GNKDEFLEKFKNAHSEGFEPDKDLMRLGIAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETE+IGKL E TM++K+G +NEHF+SFNTICDATQERQDAM +V+E VDL
Sbjct: 249 QTTMLKSETEQIGKLFETTMLKKYGPTELNEHFMSFNTICDATQERQDAMLNLVKEDVDL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQEI+ ++GI SY IDSEKRI PGNKI +K + E+ KENWLP G
Sbjct: 309 MVVIGGFNSSNTTHLQEISIEKGIDSYHIDSEKRILPGNKIEHKPLEKEIKTKENWLPDG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEAL 336
+I +G+TSGASTPDK VE V+K +FE K+ L
Sbjct: 369 KIIVGVTSGASTPDKVVEAVIKCIFEEKKANIL 401
>gi|158338063|ref|YP_001519239.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Acaryochloris
marina MBIC11017]
gi|189045802|sp|B0C4N8.1|ISPH_ACAM1 RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|158308304|gb|ABW29921.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Acaryochloris
marina MBIC11017]
Length = 415
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 212/335 (63%), Positives = 272/335 (81%), Gaps = 3/335 (0%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE-EGKKQFDVVNKGDVVVLP 62
+AYE R+QFP+E+IWITNEIIHNP+VNK L +M V+ IPV+ +G+K F VV + DVV+LP
Sbjct: 75 LAYETRRQFPQERIWITNEIIHNPSVNKNLRDMKVEFIPVQPDGQKDFTVVGQNDVVILP 134
Query: 63 AFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATAS 122
AFGA+V+EM L++K I+DTTCPWVSKVWTSVEKHKKG YTSIIHGKY HEET+AT+S
Sbjct: 135 AFGASVQEMQLLHDKGCTIMDTTCPWVSKVWTSVEKHKKGSYTSIIHGKYKHEETIATSS 194
Query: 123 FAGKYIIVKNMKEAEYVCDYILG-GELNGSSSTKEA-FLEKFKKAVSKGFDPDVDLVKVG 180
FAG Y+++ N++EAEYV DYIL G+ + A F+ KF A S GFDP+ DL +VG
Sbjct: 195 FAGTYLVLLNLEEAEYVADYILNPGDTPSEREQRRADFMAKFANAHSPGFDPETDLERVG 254
Query: 181 IANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEK 240
IANQTTMLKGETE+IGKL E+T+MRK+G VNEHF+SFNTICDATQERQDA++++V+E
Sbjct: 255 IANQTTMLKGETEQIGKLFERTVMRKYGPAQVNEHFLSFNTICDATQERQDAIFQLVDEP 314
Query: 241 VDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWL 300
+DL++V+GG+NSSNT+HLQEI+ D+ IPSY IDS RIGPGN++ +K ++ +L +NWL
Sbjct: 315 LDLMVVIGGFNSSNTTHLQEISIDKNIPSYHIDSVDRIGPGNRVEHKPLNADLTVTDNWL 374
Query: 301 PKGQITIGITSGASTPDKAVEDVLKKVFEIKREEA 335
P G + IG+TSGASTPDK V D+++K+F IK A
Sbjct: 375 PNGPLAIGVTSGASTPDKVVSDIVEKIFSIKSASA 409
>gi|416384738|ref|ZP_11684681.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Crocosphaera
watsonii WH 0003]
gi|357264993|gb|EHJ13809.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Crocosphaera
watsonii WH 0003]
Length = 402
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 218/333 (65%), Positives = 270/333 (81%), Gaps = 6/333 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ FP+EKIWITNEIIHNP+VN+RL EM V I V G K F VVN GDVV+LPA
Sbjct: 75 MAYETRQHFPQEKIWITNEIIHNPSVNQRLLEMNVGFIQVINGSKDFSVVNTGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V EM LN++N IVDTTCPWVSKVW+SVE+HKK +YTSIIHGKY HEETVAT+SF
Sbjct: 135 FGASVTEMKLLNDRNCVIVDTTCPWVSKVWSSVERHKKKEYTSIIHGKYRHEETVATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG Y++V N+KEA+YVCDYI+ G KE FL+KFK A S+GFDPD DLVK+G+AN
Sbjct: 195 AGTYLVVLNLKEAQYVCDYIVHG------GDKEEFLDKFKNAHSEGFDPDKDLVKLGVAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETE+IGKL E T+++K+G +N+HF+SFNTICDATQERQDAM +VEE V+L
Sbjct: 249 QTTMLKSETEQIGKLFESTLLKKYGPTQLNQHFMSFNTICDATQERQDAMLNLVEEDVNL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQEI+ +RGIPSY IDS++RI GNKI +K + + +ENWLP+G
Sbjct: 309 MVVIGGFNSSNTTHLQEISIERGIPSYHIDSDQRILQGNKIEHKPLEKVIETQENWLPEG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEAL 336
QI +G+TSGASTPDK VE V++++FE K L
Sbjct: 369 QIIVGVTSGASTPDKIVEAVIERIFEEKNAMVL 401
>gi|354568737|ref|ZP_08987899.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Fischerella sp.
JSC-11]
gi|353539542|gb|EHC09026.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Fischerella sp.
JSC-11]
Length = 402
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 216/328 (65%), Positives = 265/328 (80%), Gaps = 6/328 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE RK FP E+IWITNEIIHNP+VN+R+ EM V+ IPV GKK F +V GDVV+LPA
Sbjct: 75 MAYETRKHFPTERIWITNEIIHNPSVNQRMREMNVEFIPVTAGKKDFAIVETGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V+EM LN+K +IVDTTCPWVSKVW +VEKHKK +YTSIIHGKY HEET+AT+SF
Sbjct: 135 FGASVQEMQILNDKGCKIVDTTCPWVSKVWNTVEKHKKREYTSIIHGKYKHEETIATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKY+IV N+KEAEYV +YIL G +E FL KF KA S GFDPD DL +GIAN
Sbjct: 195 AGKYLIVLNLKEAEYVANYILHG------GNREEFLAKFSKACSAGFDPDKDLEMIGIAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETE+IGKL E TMM+K+G N+N+HF SFNTICDATQERQDAM ++VE+++DL
Sbjct: 249 QTTMLKSETEQIGKLFEHTMMQKYGPANLNDHFQSFNTICDATQERQDAMLELVEKQLDL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+ LQ+IA +RGI SY IDS RI N+I ++L++G L NWLP G
Sbjct: 309 MIVIGGFNSSNTTQLQQIAFERGISSYHIDSVDRILSENRIEHRLLNGNLEITNNWLPDG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIK 331
+I IG+TSGASTPDK VEDV++K+FE+K
Sbjct: 369 EIVIGVTSGASTPDKVVEDVIEKIFELK 396
>gi|332708720|ref|ZP_08428692.1| IPP and DMAPP forming E-4-hydroxy-3-methyl-but-2-enyl pyrophosphate
reductase [Moorea producens 3L]
gi|332352574|gb|EGJ32142.1| IPP and DMAPP forming E-4-hydroxy-3-methyl-but-2-enyl pyrophosphate
reductase [Moorea producens 3L]
Length = 402
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 212/328 (64%), Positives = 267/328 (81%), Gaps = 6/328 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R FP E+IWITNEIIHNP+VN+RL EM+V I VE+GKK F VV GDVV+LPA
Sbjct: 75 MAYETRTHFPNEQIWITNEIIHNPSVNQRLREMSVGFIAVEDGKKDFSVVGAGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V+EM L+ K+ +IVDTTCPWVSKVW +VEKHKK +YTSIIHGKY HEETVAT+SF
Sbjct: 135 FGASVQEMQLLHEKDCKIVDTTCPWVSKVWNTVEKHKKKEYTSIIHGKYKHEETVATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKY++V N++EAEYV +YI+ G ++ FL+KFK A+S GFDP+ DL ++GIAN
Sbjct: 195 AGKYLVVLNLQEAEYVANYIING------GNRDEFLDKFKNAISAGFDPERDLERIGIAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETE++GKL E+TMM+K+G N+N+HF SFNTICDATQERQDAM ++VEEK+DL
Sbjct: 249 QTTMLKTETEQMGKLFERTMMKKYGTSNLNDHFQSFNTICDATQERQDAMLELVEEKLDL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQEIA +R +PSY IDS RI ++I +K +H E+ NWLP G
Sbjct: 309 MIVIGGFNSSNTTHLQEIAIERQLPSYHIDSVNRIISADEIEHKPLHQEVEVARNWLPSG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIK 331
I +G+TSGASTPDK VEDV+ K+FE+K
Sbjct: 369 SIVVGVTSGASTPDKVVEDVINKIFELK 396
>gi|440681832|ref|YP_007156627.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Anabaena
cylindrica PCC 7122]
gi|428678951|gb|AFZ57717.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Anabaena
cylindrica PCC 7122]
Length = 410
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 211/328 (64%), Positives = 266/328 (81%), Gaps = 6/328 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ FP E+IWITNEIIHNP+VN+R+++M V+ IPVE KK F +V+ GDVV+LPA
Sbjct: 86 MAYETRQHFPTERIWITNEIIHNPSVNQRMQDMEVKFIPVEANKKDFSIVDTGDVVILPA 145
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+++EM LN+K QIVDTTCPWVSKVW +VEKHKKG+YTSIIHGKY HEETVAT+SF
Sbjct: 146 FGASIQEMQILNDKGCQIVDTTCPWVSKVWNTVEKHKKGEYTSIIHGKYKHEETVATSSF 205
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKY+IV N++EAEYV DYIL G +E FL KF KA S GFDPD DL +VGIAN
Sbjct: 206 AGKYLIVLNLQEAEYVTDYILNG------GNREEFLAKFAKACSAGFDPDKDLERVGIAN 259
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK +TE+IGK+ E+TMM+K+ +N+HF +FNTICDATQERQDAM ++VE+ +DL
Sbjct: 260 QTTMLKDDTEKIGKMFERTMMQKYSPTELNQHFQNFNTICDATQERQDAMLELVEQNLDL 319
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+ LQ+IA DR IPSY ID +RI N I ++ + G+LV ENWLP G
Sbjct: 320 MVVIGGFNSSNTTQLQQIAFDRTIPSYHIDCVERIQSTNAIEHRQLTGDLVITENWLPAG 379
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIK 331
+I +GITSGASTPDK VED+++K+F +K
Sbjct: 380 EIVVGITSGASTPDKVVEDIIEKIFALK 407
>gi|414076773|ref|YP_006996091.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Anabaena sp.
90]
gi|413970189|gb|AFW94278.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Anabaena sp.
90]
Length = 402
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 216/333 (64%), Positives = 266/333 (79%), Gaps = 6/333 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ FP E IWITNEIIHNP+VNKR++EM V+ IPV + K F VV GDVV+LPA
Sbjct: 75 MAYETRQHFPTEHIWITNEIIHNPSVNKRMQEMQVEFIPVIDQVKDFSVVGSGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V+EM LN+K QIVDTTCPWVSKVW +VEKHKKGDYTSIIHGKY HEETVAT+SF
Sbjct: 135 FGASVQEMQILNDKGCQIVDTTCPWVSKVWNTVEKHKKGDYTSIIHGKYKHEETVATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKY+IV N++EAEYV +YIL G ++ FL KF KA S GFDPD DL +VGIAN
Sbjct: 195 AGKYLIVLNLQEAEYVINYILNG------GNRQEFLAKFAKACSAGFDPDQDLERVGIAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETE+IGK++E+TMM+K+G +N+HF +FNTICDATQERQDAM ++VEEKVDL
Sbjct: 249 QTTMLKDETEKIGKMLERTMMQKYGPAELNQHFQNFNTICDATQERQDAMLELVEEKVDL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+ LQ+IA DR IPSY ID +RI N I ++ + GEL ENWLP G
Sbjct: 309 MIVIGGFNSSNTTQLQQIAFDRDIPSYHIDCVERIQSINNIEHRQLTGELAITENWLPVG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEAL 336
+I +G+TSGASTPD+ VED+++K+F +K L
Sbjct: 369 KIKVGVTSGASTPDQVVEDIIEKIFALKATATL 401
>gi|282900359|ref|ZP_06308309.1| LytB protein [Cylindrospermopsis raciborskii CS-505]
gi|281194672|gb|EFA69619.1| LytB protein [Cylindrospermopsis raciborskii CS-505]
Length = 401
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 213/328 (64%), Positives = 267/328 (81%), Gaps = 6/328 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ FP E+IWITNEIIHNP+VN+R++EM V IPV KK F VV +GDVV+LPA
Sbjct: 75 MAYETRQHFPTERIWITNEIIHNPSVNQRMQEMGVGFIPVTANKKDFSVVEQGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V+EM L++K QIVDTTCPWVSKVW +VEKHKKG++TSIIHGKY HEETVAT+SF
Sbjct: 135 FGASVQEMQILHDKGCQIVDTTCPWVSKVWNTVEKHKKGEFTSIIHGKYKHEETVATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKY+IV N++EAEYV +YIL G +E FL +F KA S GFDPD DL KVGIAN
Sbjct: 195 AGKYLIVLNLQEAEYVSNYILHG------GNREEFLTRFAKAYSAGFDPDKDLEKVGIAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETE+IGK+ EKTMM+K+G +N+HF SFNTICDATQERQDAM ++VE ++DL
Sbjct: 249 QTTMLKGETEQIGKIFEKTMMQKYGTLALNDHFQSFNTICDATQERQDAMLELVEHELDL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
I+V+GG+NSSNT+ LQ+IA +R IPSY IDS +RI P N I ++ ++GE+ +NWLP G
Sbjct: 309 IIVIGGFNSSNTTQLQQIAINRNIPSYHIDSVERIKPSNAIEHRQLNGEIATTKNWLPIG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIK 331
+ +G+TSGASTPDK VED+++K+F +K
Sbjct: 369 ETIVGVTSGASTPDKVVEDIIEKIFTLK 396
>gi|427706395|ref|YP_007048772.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nostoc sp. PCC
7107]
gi|427358900|gb|AFY41622.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nostoc sp. PCC
7107]
Length = 397
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 211/328 (64%), Positives = 266/328 (81%), Gaps = 6/328 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ FP E+IWITNEIIHNP+VN+R+++M V+ IP+E GKK F VV DVV+LPA
Sbjct: 75 MAYETRQHFPREQIWITNEIIHNPSVNQRMQDMEVKFIPLETGKKDFSVVETNDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V+EM L++K +IVDTTCPWVSKVW +VEKHKK DYTSIIHGKY HEETVAT+SF
Sbjct: 135 FGASVQEMQILHDKGCKIVDTTCPWVSKVWNTVEKHKKIDYTSIIHGKYKHEETVATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKY+IV N+KEA YV DYIL G +E FL+KF KA S GFDPD DL +VGIAN
Sbjct: 195 AGKYLIVLNLKEAHYVTDYILNG------GNREEFLQKFAKACSAGFDPDQDLERVGIAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETE+IGKL E+TMM+K+G +N+HF SFNTICDATQERQDAM ++V+ +DL
Sbjct: 249 QTTMLKGETEQIGKLFERTMMQKYGPAELNQHFQSFNTICDATQERQDAMLELVQHDLDL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+ LQ+IA ++GIPSY ID+ +RI I ++ ++GEL ENWLP G
Sbjct: 309 MVVIGGFNSSNTTQLQQIAFEKGIPSYHIDAVERIKSAQAIEHRQLNGELAIAENWLPAG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIK 331
+I +GITSGASTPDK VED+++++F +K
Sbjct: 369 KIVVGITSGASTPDKVVEDIIEEIFTLK 396
>gi|434398820|ref|YP_007132824.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Stanieria
cyanosphaera PCC 7437]
gi|428269917|gb|AFZ35858.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Stanieria
cyanosphaera PCC 7437]
Length = 402
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 214/328 (65%), Positives = 267/328 (81%), Gaps = 6/328 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ FP ++IWITNEIIHNP+VN+RL EM V I V +G K F VV GDVV+LPA
Sbjct: 75 MAYETRQHFPTQRIWITNEIIHNPSVNQRLREMKVGFIDVIDGNKDFSVVQSGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V EM LN++ IVDTTCPWVSKVW SVEKHKK DYTSIIHGKY+HEET+AT+SF
Sbjct: 135 FGASVTEMQLLNDRGCTIVDTTCPWVSKVWNSVEKHKKRDYTSIIHGKYNHEETIATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
A KY++V N+++AEYV +YIL G +E FL KFK A S+GFDPD+DLV++GIAN
Sbjct: 195 ADKYLVVLNLQQAEYVVNYILYG------GDREEFLTKFKNAYSEGFDPDLDLVRIGIAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETE+IGKL E+TM++K+G +NEHF+SFNTICDATQERQDAM +V+E + L
Sbjct: 249 QTTMLKSETEQIGKLFEQTMLKKYGPIELNEHFMSFNTICDATQERQDAMLNLVKEDLAL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQEIA + GIPSY IDS RIG GN+I +K + +L KENWLP+G
Sbjct: 309 MVVIGGFNSSNTTHLQEIAIEHGIPSYHIDSVARIGEGNRIEHKPLGKDLEIKENWLPEG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIK 331
+ITIG+TSGASTPDK V DV++K+F++K
Sbjct: 369 KITIGVTSGASTPDKVVADVIEKIFDLK 396
>gi|308806748|ref|XP_003080685.1| putative LytB protein (ISS) [Ostreococcus tauri]
gi|116059146|emb|CAL54853.1| putative LytB protein (ISS) [Ostreococcus tauri]
Length = 456
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 217/329 (65%), Positives = 258/329 (78%), Gaps = 7/329 (2%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYEARKQFPE K+WITNEIIHNPTVN+RL +M V I E K F V G+VV+LPA
Sbjct: 125 MAYEARKQFPESKLWITNEIIHNPTVNERLSDMGVNFIEESENGKDFSGVQSGEVVILPA 184
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V EM L ++ IVDTTCPWVSKVW +V+ HK+ ++TSIIHGKYSHEETVATASF
Sbjct: 185 FGASVHEMKFLADRGANIVDTTCPWVSKVWNAVDTHKRKEFTSIIHGKYSHEETVATASF 244
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
A Y+IVK+M EAEYV DYI+ G K F+EKFK A+S+GFDPD DL VGIAN
Sbjct: 245 ATTYLIVKDMTEAEYVRDYIMNG------GDKAEFMEKFKNAMSEGFDPDEDLNGVGIAN 298
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETE IGKL ++TMM KFGVEN ++HF+ +TICDATQERQDAMYK+V++K D+
Sbjct: 299 QTTMLKGETEAIGKLFQQTMMEKFGVENADQHFVVMDTICDATQERQDAMYKLVDDKPDI 358
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPG-NKIAYKLMHGELVEKENWLPK 302
+LVVGG+NSSNTSHLQEIAED+ IPSYW+D+ +R+ P N I +KL HGELV + WLP
Sbjct: 359 MLVVGGFNSSNTSHLQEIAEDKSIPSYWVDTAERLDPSKNSITHKLAHGELVTTDAWLPA 418
Query: 303 GQITIGITSGASTPDKAVEDVLKKVFEIK 331
+ IGITSGASTPDK VEDV+ VF K
Sbjct: 419 SDVVIGITSGASTPDKVVEDVIDVVFATK 447
>gi|427718525|ref|YP_007066519.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Calothrix sp.
PCC 7507]
gi|427350961|gb|AFY33685.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Calothrix sp.
PCC 7507]
Length = 406
Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust.
Identities = 213/328 (64%), Positives = 262/328 (79%), Gaps = 6/328 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ FP ++IWITNEIIHNP VN+RL EM V+ IP + K F VV DVV+LPA
Sbjct: 75 MAYETRQHFPSDRIWITNEIIHNPAVNQRLREMQVEFIPDDGKIKDFSVVESADVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V+EM L++K +IVDTTCPWVSKVW +VEKHKK DYTSIIHGKY HEETVAT+SF
Sbjct: 135 FGASVQEMQLLHDKGCKIVDTTCPWVSKVWNTVEKHKKIDYTSIIHGKYKHEETVATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKY+IV N++EAEYV +YIL G +E F+ KF KA S GFDPD DL +VGIAN
Sbjct: 195 AGKYLIVLNLEEAEYVSNYILNG------GNREEFIAKFAKAYSAGFDPDRDLERVGIAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETE+IGKL E+TMMRK+G + +N+HF SFNTICDATQERQDAM+++VEEK+DL
Sbjct: 249 QTTMLKGETEQIGKLFERTMMRKYGPDELNQHFQSFNTICDATQERQDAMFELVEEKLDL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQEI RGIPSY ID +RI I ++ + GEL +NWLP G
Sbjct: 309 MVVIGGFNSSNTTHLQEIPIQRGIPSYHIDCVERIKSAQAIEHRQLDGELAIAQNWLPDG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIK 331
+I +G+TSGASTPDK VEDV++K+F +K
Sbjct: 369 KIIVGVTSGASTPDKVVEDVIEKIFALK 396
>gi|390441907|ref|ZP_10229935.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microcystis sp.
T1-4]
gi|389834805|emb|CCI34061.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microcystis sp.
T1-4]
Length = 402
Score = 452 bits (1163), Expect = e-125, Method: Compositional matrix adjust.
Identities = 213/328 (64%), Positives = 265/328 (80%), Gaps = 6/328 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ FP+E++WITNEIIHNP+VN+RL MAV IPVE G+K F VV GDVV+LPA
Sbjct: 75 MAYETRQHFPQERLWITNEIIHNPSVNQRLRAMAVGFIPVENGQKDFSVVESGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA++ EM LN+K IVDTTCPWVSKVW SVEKHKK D+TSIIHGKY+HEET+AT+SF
Sbjct: 135 FGASISEMQILNDKGCMIVDTTCPWVSKVWNSVEKHKKKDHTSIIHGKYNHEETIATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG Y+IV N+ +A YV +YIL G K FLEKFK A S+GFDPD DL +GIAN
Sbjct: 195 AGTYLIVLNLAQANYVANYILHG------GDKNEFLEKFKNAHSQGFDPDRDLDYIGIAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETEEIGKL E TM+RK+G + +HF+SFNTICDATQERQDAM+++V+E V L
Sbjct: 249 QTTMLKSETEEIGKLFEHTMLRKYGPIDFKDHFMSFNTICDATQERQDAMFELVKEPVSL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQEIA +R IPSY IDS +RI PGN+I +K + G+L+ +NWL +G
Sbjct: 309 MVVIGGYNSSNTTHLQEIAIERAIPSYHIDSAERILPGNRIEHKPLGGDLIITDNWLNEG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIK 331
+I IG+TSGASTPDK VE+V++K+F +K
Sbjct: 369 KIAIGVTSGASTPDKVVEEVIEKIFALK 396
>gi|67921533|ref|ZP_00515051.1| LytB protein [Crocosphaera watsonii WH 8501]
gi|67856645|gb|EAM51886.1| LytB protein [Crocosphaera watsonii WH 8501]
Length = 402
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 216/328 (65%), Positives = 267/328 (81%), Gaps = 6/328 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE + FP+EKIWITNEIIHNP+VN+RL EM V I V G K F VVN GDVV+LPA
Sbjct: 75 MAYETGQHFPQEKIWITNEIIHNPSVNQRLLEMNVGFIQVINGSKDFSVVNTGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V EM LN++N IVDTTCPWVSKVW+SVE+HKK +YTSIIHGKY HEETVAT+SF
Sbjct: 135 FGASVTEMKLLNDRNCVIVDTTCPWVSKVWSSVERHKKKEYTSIIHGKYRHEETVATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG Y++V N+KEA+YVCDYI+ G KE FL+KFK A S+GFDPD DLVK+G+AN
Sbjct: 195 AGTYLVVLNLKEAQYVCDYIVHG------GDKEEFLDKFKNAHSEGFDPDKDLVKLGVAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETE+IGKL E T+++K+G +N+HF+SFNTICDATQERQDAM +VEE VDL
Sbjct: 249 QTTMLKSETEQIGKLFESTLLKKYGPTQLNQHFMSFNTICDATQERQDAMLNLVEEDVDL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQEI+ +RGI SY IDS++RI GNKI +K + + +ENWLP+G
Sbjct: 309 MVVIGGFNSSNTTHLQEISIERGILSYHIDSDQRILQGNKIEHKPLEKVIETQENWLPEG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIK 331
QI +G+TSGASTPDK VE V++++FE K
Sbjct: 369 QILVGVTSGASTPDKIVEAVIERIFEEK 396
>gi|145349772|ref|XP_001419302.1| isopentenyl diphosphate synthase, putative chloroplast precursor;
4-hydroxy-3-methylbut-2-enyl diphosphate reductase
(ISPH) (LYTB) [Ostreococcus lucimarinus CCE9901]
gi|144579533|gb|ABO97595.1| isopentenyl diphosphate synthase, putative chloroplast precursor;
4-hydroxy-3-methylbut-2-enyl diphosphate reductase
(ISPH) (LYTB) [Ostreococcus lucimarinus CCE9901]
Length = 380
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 218/330 (66%), Positives = 255/330 (77%), Gaps = 7/330 (2%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYEARKQFPE K+WITNEIIHNPTVN RL EM V + K F V +G+VV+LPA
Sbjct: 49 MAYEARKQFPEAKLWITNEIIHNPTVNDRLSEMGVNFVEETSDGKDFSGVKRGEVVILPA 108
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V EM L +K IVDTTCPWVSKVW +V+ HK+ D+TSIIHGKYSHEETVATASF
Sbjct: 109 FGASVHEMKFLADKGANIVDTTCPWVSKVWNAVDTHKRKDFTSIIHGKYSHEETVATASF 168
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
A Y+IVK+M+EA YV DYIL G K F+EKFK A+S+GFDPD DL VGIAN
Sbjct: 169 ATTYLIVKDMREANYVRDYILKG------GDKAEFMEKFKNAMSQGFDPDEDLDGVGIAN 222
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETE IGKL + TMM KFGVENV++HF+ +TICDATQERQDAMYK+V+ K D+
Sbjct: 223 QTTMLKGETEAIGKLFQSTMMEKFGVENVDQHFVVMDTICDATQERQDAMYKLVDAKPDI 282
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPG-NKIAYKLMHGELVEKENWLPK 302
+LVVGG NSSNT HLQEI+ED+ IPSYW+D+ R+ N I++KL HGELV + WLP
Sbjct: 283 MLVVGGLNSSNTQHLQEISEDKAIPSYWVDTADRLNADTNSISHKLAHGELVTTDGWLPA 342
Query: 303 GQITIGITSGASTPDKAVEDVLKKVFEIKR 332
G + IGITSGASTPDK VEDV+ VF KR
Sbjct: 343 GDVVIGITSGASTPDKVVEDVMDVVFATKR 372
>gi|425458947|ref|ZP_18838433.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microcystis
aeruginosa PCC 9808]
gi|389823434|emb|CCI28327.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microcystis
aeruginosa PCC 9808]
Length = 402
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 212/328 (64%), Positives = 264/328 (80%), Gaps = 6/328 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ FP+E++WITNEIIHNP+VN+RL MAV IPVE G+K F VV GDVV+LPA
Sbjct: 75 MAYETRQHFPQERLWITNEIIHNPSVNQRLRSMAVSFIPVENGQKDFSVVESGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V EM LN+K IVDTTCPWVSKVW SVEKHKK +TSIIHGKY+HEET+AT+SF
Sbjct: 135 FGASVSEMKILNDKGCMIVDTTCPWVSKVWNSVEKHKKSAHTSIIHGKYNHEETIATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG Y+IV N+ +A YV +YIL G K FLEKFK A S+GFDPD DL +GIAN
Sbjct: 195 AGTYLIVLNLAQANYVANYILHG------GDKNEFLEKFKNAHSQGFDPDRDLDYIGIAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETEEIGKL E TM+RK+G N +HF+SFNTICDATQERQDAM+++V+E + L
Sbjct: 249 QTTMLKSETEEIGKLFEHTMLRKYGPINFKDHFMSFNTICDATQERQDAMFELVKEPLSL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQEIA +R IPSY IDS +RI PGN+I +K + G+L+ +NWL +G
Sbjct: 309 MVVIGGYNSSNTTHLQEIAIERAIPSYHIDSAERILPGNRIEHKPLGGDLIITDNWLNEG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIK 331
+I +G+TSGASTPDK VE+V++K+F +K
Sbjct: 369 KIIVGVTSGASTPDKVVEEVIEKIFALK 396
>gi|425452921|ref|ZP_18832736.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microcystis
aeruginosa PCC 7941]
gi|389765106|emb|CCI08959.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microcystis
aeruginosa PCC 7941]
Length = 402
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 212/328 (64%), Positives = 265/328 (80%), Gaps = 6/328 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ FP+E++WITNEIIHNP+VN+RL MAV IPVE G+K F VV GDVV+LPA
Sbjct: 75 MAYETRQHFPQERLWITNEIIHNPSVNQRLRSMAVGFIPVENGQKDFTVVESGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V EM LN+K IVDTTCPWVSKVW SVEKHKK D+TSIIHGKY+HEET+AT+SF
Sbjct: 135 FGASVSEMKILNDKGCMIVDTTCPWVSKVWNSVEKHKKSDHTSIIHGKYNHEETIATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG Y+IV N+ +A YV +YIL G K FLEKFK A S+GFDPD DL +GIAN
Sbjct: 195 AGTYLIVLNLAQANYVANYILHG------GDKNEFLEKFKNAHSQGFDPDRDLDYIGIAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETEEIGKL E TM+RK+G + +HF+SFNTICDATQERQDAM+++V+E + L
Sbjct: 249 QTTMLKSETEEIGKLFEHTMLRKYGPIDFKDHFMSFNTICDATQERQDAMFELVKEPLSL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQEIA +R IPSY IDS +RI PGN+I +K + G+L+ +NWL +G
Sbjct: 309 MVVIGGYNSSNTTHLQEIAIERAIPSYHIDSAERILPGNRIEHKPLGGDLIITDNWLNEG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIK 331
+I +G+TSGASTPDK VE+V++K+F +K
Sbjct: 369 KIIVGVTSGASTPDKVVEEVIEKIFALK 396
>gi|443316023|ref|ZP_21045486.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Leptolyngbya sp. PCC 6406]
gi|442784370|gb|ELR94247.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Leptolyngbya sp. PCC 6406]
Length = 406
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 210/331 (63%), Positives = 266/331 (80%), Gaps = 9/331 (2%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ FP E+IWITNEIIHNP VN+RL EM V I + +G+K F V GDVV+LPA
Sbjct: 75 MAYETRQHFPSERIWITNEIIHNPGVNQRLREMDVHFIELVDGQKDFSGVGPGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V+EM LN++ IVDTTCPWVSKVW +VEKHKK +TSIIHGKY+HEETVAT+SF
Sbjct: 135 FGASVQEMQFLNDRGCTIVDTTCPWVSKVWNTVEKHKKKAHTSIIHGKYAHEETVATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
A Y++V N++EA+YV DYI+ G +E FL KF+ A S+GFDPD DL ++GIAN
Sbjct: 195 AQTYLVVLNLEEAQYVADYIMQG------GDREEFLTKFRHAHSEGFDPDRDLERIGIAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEK--- 240
QTTMLKGETE IGKL E+TM++K+G + +N+HF++FNTICDATQERQDAM+++V+E
Sbjct: 249 QTTMLKGETEAIGKLFERTMLQKYGPQALNDHFLAFNTICDATQERQDAMFELVDEADKT 308
Query: 241 VDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWL 300
VDL+LV+GG+NSSNT+HLQEIA DR IPSY ID +RIGPGN+I +K +HG+L ENWL
Sbjct: 309 VDLMLVIGGYNSSNTTHLQEIAIDRTIPSYHIDGPERIGPGNRIEHKPLHGDLTVTENWL 368
Query: 301 PKGQITIGITSGASTPDKAVEDVLKKVFEIK 331
P G IT+G+TSGASTPD+AVE + ++FE+K
Sbjct: 369 PPGPITVGVTSGASTPDRAVEVAIARIFELK 399
>gi|302767256|ref|XP_002967048.1| hypothetical protein SELMODRAFT_408398 [Selaginella moellendorffii]
gi|300165039|gb|EFJ31647.1| hypothetical protein SELMODRAFT_408398 [Selaginella moellendorffii]
Length = 373
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 221/327 (67%), Positives = 257/327 (78%), Gaps = 26/327 (7%)
Query: 10 KQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVE 69
KQFP++ IW+TNEIIHNPTVN++LEEM ++ IPVE+ K F VV + DVVV PAFGA V+
Sbjct: 72 KQFPDQHIWLTNEIIHNPTVNQKLEEMEIKMIPVEDKVKDFSVVKEKDVVVFPAFGATVQ 131
Query: 70 EMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYII 129
EM L K VQIVDTTCPWV+KVW SVEKHKK YTS+IHGKY+HEETVATASFAGKYII
Sbjct: 132 EMQLLAEKKVQIVDTTCPWVAKVWNSVEKHKKSSYTSVIHGKYAHEETVATASFAGKYII 191
Query: 130 VKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLK 189
VKNMKEA YVCDYILGG+ +GS+ TKE LEK K A SKGFDPD DLV+VGIANQTTMLK
Sbjct: 192 VKNMKEATYVCDYILGGKFDGSNGTKEELLEKSKYATSKGFDPDDDLVRVGIANQTTMLK 251
Query: 190 GETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGG 249
GETE+IGKL+++TMM+K+GVEN N+HF+S NTICDATQ+ V D
Sbjct: 252 GETEDIGKLLQRTMMQKYGVENTNDHFMSVNTICDATQQH-------VAPPRD------- 297
Query: 250 WNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGI 309
E IPSYWID+E+RIGPGNKIAY+L HGELVEKENW P G +TIGI
Sbjct: 298 ------------GEINNIPSYWIDTEERIGPGNKIAYRLNHGELVEKENWFPTGPVTIGI 345
Query: 310 TSGASTPDKAVEDVLKKVFEIKREEAL 336
TSGASTPDK VE+VLK+VF++K++EAL
Sbjct: 346 TSGASTPDKVVENVLKQVFQLKKQEAL 372
>gi|443323129|ref|ZP_21052139.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Gloeocapsa sp. PCC 73106]
gi|442787184|gb|ELR96907.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Gloeocapsa sp. PCC 73106]
Length = 397
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 210/328 (64%), Positives = 267/328 (81%), Gaps = 6/328 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ FP+E++WITNEIIHNP+VN+RL+EM V+ I V+ G+K F VV GDVV+LPA
Sbjct: 75 MAYETRQHFPQERLWITNEIIHNPSVNQRLKEMQVKFIEVKAGEKDFSVVESGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA++ EM TLN+K IVDTTCPWV+KVW SVEKHKK DYTSIIHGKY+HEET+AT+SF
Sbjct: 135 FGASIAEMQTLNDKGCTIVDTTCPWVAKVWNSVEKHKKKDYTSIIHGKYNHEETIATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
A KY+IV N++EAEYV +YIL G K FL F +A S GFDPD DLV++GIAN
Sbjct: 195 ADKYLIVLNLEEAEYVANYILKG------GVKSEFLAHFAQACSDGFDPDKDLVRIGIAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETE+IGKL E T+++K+G +NEHF+SFNTICDATQERQDAM+++V+ ++ L
Sbjct: 249 QTTMLKSETEQIGKLFEHTILKKYGPIKLNEHFMSFNTICDATQERQDAMFELVKTELSL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQEIA+ +GIPSY IDS RIGPGN++ +K + EL ENWL +G
Sbjct: 309 MVVIGGFNSSNTTHLQEIAQAKGIPSYHIDSSDRIGPGNRVEHKPLGKELEITENWLKEG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIK 331
+I +GITSGASTPDK V DV++K+F +K
Sbjct: 369 EIVVGITSGASTPDKVVADVIEKIFNLK 396
>gi|443668765|ref|ZP_21134257.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microcystis
aeruginosa DIANCHI905]
gi|159029347|emb|CAO90213.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443330727|gb|ELS45422.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microcystis
aeruginosa DIANCHI905]
Length = 402
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 211/328 (64%), Positives = 264/328 (80%), Gaps = 6/328 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ FP+E++WITNEIIHNP+VN+RL MAV IPVE G+K F VV GDVV+LPA
Sbjct: 75 MAYETRQHFPQERLWITNEIIHNPSVNQRLRSMAVGFIPVENGQKDFTVVESGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V EM LN+K IVDTTCPWVSKVW SVEKHKK D+TSIIHGKY+HEET+AT+SF
Sbjct: 135 FGASVSEMQILNDKGCMIVDTTCPWVSKVWNSVEKHKKSDHTSIIHGKYNHEETIATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG Y+IV N+ +A YV +YIL G K FLEKFK A S+GFDPD DL +GIAN
Sbjct: 195 AGTYLIVLNLAQANYVANYILHG------GDKNEFLEKFKNAHSQGFDPDRDLDYIGIAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETE IGKL E TM+RK+G + +HF+SFNTICDATQERQDAM+++V+E + L
Sbjct: 249 QTTMLKSETEAIGKLFEHTMLRKYGPIDFKDHFMSFNTICDATQERQDAMFELVKEPLSL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQEIA +R IPSY IDS +RI PGN+I +K + G+L+ +NWL +G
Sbjct: 309 MVVIGGYNSSNTTHLQEIAIERAIPSYHIDSAERILPGNRIEHKPLGGDLIITDNWLNEG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIK 331
+I +G+TSGASTPDK VE+V++K+F +K
Sbjct: 369 KIIVGVTSGASTPDKVVEEVIEKIFALK 396
>gi|428308076|ref|YP_007144901.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Crinalium
epipsammum PCC 9333]
gi|428249611|gb|AFZ15391.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Crinalium
epipsammum PCC 9333]
Length = 402
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 209/328 (63%), Positives = 264/328 (80%), Gaps = 6/328 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ FP E IW+TNE+IHNP+VN+RLEEM ++ +PV+ G K F VVN GDVV+LPA
Sbjct: 75 MAYETRQHFPNEDIWVTNELIHNPSVNQRLEEMLIRYVPVDAGNKDFSVVNSGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA V+EM LN+K +I+DTTCPWVSKVW +VEKHKK +YTSIIHGKY HEETVAT+SF
Sbjct: 135 FGATVQEMQLLNDKGCKIIDTTCPWVSKVWNTVEKHKKKNYTSIIHGKYKHEETVATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG Y+IV NM EAEYVC+YIL G ++ F+ KF KA S GF+PD DL +VGIAN
Sbjct: 195 AGTYLIVFNMAEAEYVCNYILNG------GNRDEFMSKFSKACSVGFNPDTDLERVGIAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETE+IGKL E TMM+K+ + +NEHF +FNTICDATQERQDAM+++V+E +DL
Sbjct: 249 QTTMLKTETEQIGKLFEHTMMKKYPPDELNEHFQNFNTICDATQERQDAMFELVKEDLDL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+ LQ+I DR IPSY IDS RI P N+I +K + +L ENWLP+G
Sbjct: 309 MVVIGGFNSSNTTQLQQIPIDRNIPSYHIDSAVRIHPENRIEHKPIGKDLEVVENWLPEG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIK 331
++ +GITSGASTPDK VE+V++K+FE+K
Sbjct: 369 KVVVGITSGASTPDKVVEEVIEKIFELK 396
>gi|427737354|ref|YP_007056898.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Rivularia sp. PCC 7116]
gi|427372395|gb|AFY56351.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Rivularia sp. PCC 7116]
Length = 402
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 215/333 (64%), Positives = 265/333 (79%), Gaps = 6/333 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE RK FP E+IWITNEIIHNP+VN+RL+EM V I ++ +K F VV GDVV+LPA
Sbjct: 75 MAYETRKHFPSERIWITNEIIHNPSVNQRLKEMQVGFISLKADEKDFSVVGSGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V+EM L++K +IVDTTCPWVSKVW +VEKHKK + TSIIHGKY HEET+AT+SF
Sbjct: 135 FGASVQEMQLLSDKGCKIVDTTCPWVSKVWNTVEKHKKVECTSIIHGKYKHEETIATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKY+IV N++EAEYV YIL G +E FL KF KA S GFDPD DL KVGIAN
Sbjct: 195 AGKYLIVLNLQEAEYVTSYILNG------GNREEFLAKFSKACSSGFDPDTDLKKVGIAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETE+IGKL E+TMM+K+G +N HF SFNTICDATQERQDAM ++VEEK+D
Sbjct: 249 QTTMLKGETEQIGKLFERTMMKKYGPTELNNHFQSFNTICDATQERQDAMLELVEEKLDF 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQEIA ++ IPSY +DS +RI N I ++ + G + ENWLP G
Sbjct: 309 MIVIGGFNSSNTAHLQEIAVEKKIPSYHVDSVERILSENNIEHRQLDGNIEISENWLPDG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEAL 336
+I +GITSGASTPDK VEDV+KK+FE+K+ A+
Sbjct: 369 EIIVGITSGASTPDKVVEDVIKKIFELKKAVAV 401
>gi|425440299|ref|ZP_18820604.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microcystis
aeruginosa PCC 9717]
gi|389719297|emb|CCH96842.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microcystis
aeruginosa PCC 9717]
Length = 402
Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust.
Identities = 211/328 (64%), Positives = 263/328 (80%), Gaps = 6/328 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ FP+E++WITNEIIHNP+VN+RL MAV IPVE G+K F VV GDVV+LPA
Sbjct: 75 MAYETRQHFPQERLWITNEIIHNPSVNQRLRSMAVSFIPVENGQKDFSVVESGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V EM LN+K IVDTTCPWVSKVW SVEKHKK D+TSIIHGKY+HEET+AT+SF
Sbjct: 135 FGASVSEMQILNDKGCMIVDTTCPWVSKVWNSVEKHKKSDHTSIIHGKYNHEETIATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG Y+IV N+ +A YV +YIL G K FLEKFK A S+GFDPD DL +GIAN
Sbjct: 195 AGTYLIVLNLDQANYVANYILHG------GDKNEFLEKFKNAHSQGFDPDRDLDYIGIAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETEEIGKL E TM+RK+G + +HF+SFNTICDATQERQDAM+++V+E + L
Sbjct: 249 QTTMLKSETEEIGKLFEHTMLRKYGPIDFKDHFMSFNTICDATQERQDAMFELVKEPLSL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQEIA +R IPSY IDS +RI PGN+I +K + +L+ +NWL +G
Sbjct: 309 MVVIGGYNSSNTTHLQEIAIERAIPSYHIDSAERILPGNRIEHKPLGDDLIITDNWLNEG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIK 331
+I +G+TSGASTPDK VE+V++K+F K
Sbjct: 369 KIVVGVTSGASTPDKVVEEVIEKIFAFK 396
>gi|440755905|ref|ZP_20935106.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microcystis
aeruginosa TAIHU98]
gi|440173127|gb|ELP52585.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microcystis
aeruginosa TAIHU98]
Length = 402
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 210/328 (64%), Positives = 263/328 (80%), Gaps = 6/328 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ FP+E++WITNEIIHNP+VN+RL MAV IP+E G+K F VV GDVV+LPA
Sbjct: 75 MAYETRQHFPQERLWITNEIIHNPSVNQRLRSMAVGFIPMENGQKDFTVVESGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+ EM LN+K IVDTTCPWVSKVW SVEKHKK D+TSIIHGKY+HEET+AT+SF
Sbjct: 135 FGASASEMQILNDKGCMIVDTTCPWVSKVWNSVEKHKKSDHTSIIHGKYNHEETIATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG Y+IV N+ +A YV +YIL G K FLE+FK A S+GFDPD DL +GIAN
Sbjct: 195 AGTYLIVLNLAQANYVANYILHG------GDKNEFLEEFKNAHSQGFDPDRDLDYIGIAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETEEIGKL E TM+RK+G N +HF+SFNTICDATQERQDAM+++V+E + L
Sbjct: 249 QTTMLKSETEEIGKLFEHTMLRKYGPINFKDHFMSFNTICDATQERQDAMFELVKEPLSL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQEIA R IPSY IDS +RI PGN+I +K + G+L+ +NWL +G
Sbjct: 309 MVVIGGYNSSNTTHLQEIAIKRAIPSYHIDSAERILPGNRIEHKPLGGDLIITDNWLNEG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIK 331
+I +G+TSGASTPDK VE+V++K+F +K
Sbjct: 369 KIIVGVTSGASTPDKVVEEVIEKIFALK 396
>gi|425454255|ref|ZP_18834001.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microcystis
aeruginosa PCC 9807]
gi|389805126|emb|CCI15289.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microcystis
aeruginosa PCC 9807]
Length = 402
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 211/328 (64%), Positives = 264/328 (80%), Gaps = 6/328 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ FP+E+IWITNEIIHNP+VN+RL MAV IPVE G+K F VV GDVV+LPA
Sbjct: 75 MAYETRQHFPQERIWITNEIIHNPSVNQRLRSMAVGFIPVENGQKDFTVVESGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V EM LN+K IVDTTCPWVSKVW SVEKHKK D+TSIIHGKY+HEET+AT+SF
Sbjct: 135 FGASVSEMQILNDKGCMIVDTTCPWVSKVWNSVEKHKKSDHTSIIHGKYNHEETIATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG Y+IV N+ +A YV +YIL G K FLEKFK A S+GFDPD +L +GIAN
Sbjct: 195 AGTYLIVLNLAQANYVANYILHG------GDKNEFLEKFKNAHSQGFDPDRNLDYIGIAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETE IGKL E TM+RK+G + +HF+SFNTICDATQERQDAM+++V+E + L
Sbjct: 249 QTTMLKSETEAIGKLFEHTMLRKYGPIDFKDHFMSFNTICDATQERQDAMFELVKEPLSL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQEIA +R IPSY IDS +RI PGN+I +K + G+L+ +NWL +G
Sbjct: 309 MVVIGGYNSSNTTHLQEIAIERAIPSYHIDSAERILPGNRIEHKPLGGDLIITDNWLNEG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIK 331
+I +G+TSGASTPDK VE+V++K+F +K
Sbjct: 369 KIIVGVTSGASTPDKVVEEVIEKIFALK 396
>gi|186683473|ref|YP_001866669.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nostoc
punctiforme PCC 73102]
gi|238691254|sp|B2IZV5.1|ISPH_NOSP7 RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|186465925|gb|ACC81726.1| hydroxymethylbutenyl pyrophosphate reductase [Nostoc punctiforme
PCC 73102]
Length = 402
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 210/333 (63%), Positives = 266/333 (79%), Gaps = 6/333 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ FP E IWITNEIIHNP+VN+R++EM V+ IP+E K F VV GDVV+LPA
Sbjct: 75 MAYETRQHFPTEHIWITNEIIHNPSVNQRMQEMEVEFIPIEGKNKDFSVVGTGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V+EM L++K +IVDTTCPWVSKVW +VEKHKK DYTSIIHGKY HEETVAT+SF
Sbjct: 135 FGASVQEMQILHDKGCKIVDTTCPWVSKVWNTVEKHKKIDYTSIIHGKYKHEETVATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKY+IV N++EA+YV DYI+ G +E FL KF KA S GFDPD DL +VGIAN
Sbjct: 195 AGKYLIVLNLQEAQYVADYIING------GNREEFLTKFAKACSAGFDPDRDLERVGIAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETE+IGKL E+TM++K+ +N+HF SFNTICDATQERQDAM ++VE ++L
Sbjct: 249 QTTMLKDETEQIGKLFERTMLQKYSPIELNQHFQSFNTICDATQERQDAMLELVEHNLNL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+ LQ+IA +R IPSY ID+ +RI G+ I ++ ++G+L+ ENWLP G
Sbjct: 309 MVVIGGFNSSNTTQLQQIAFERRIPSYHIDTVERIKSGDSIEHRQLNGQLITTENWLPDG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEAL 336
+I +GITSGASTPDK VEDV++K+F +K AL
Sbjct: 369 EIVVGITSGASTPDKVVEDVIEKIFAVKATAAL 401
>gi|425444881|ref|ZP_18824922.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microcystis
aeruginosa PCC 9443]
gi|389735275|emb|CCI01193.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microcystis
aeruginosa PCC 9443]
Length = 402
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 211/328 (64%), Positives = 264/328 (80%), Gaps = 6/328 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ FP+E+IWITNEIIHNP+VN+RL MAV IPVE G+K F VV GDVV+LPA
Sbjct: 75 MAYETRQHFPQERIWITNEIIHNPSVNQRLRSMAVGFIPVENGQKDFTVVESGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V EM LN+K IVDTTCPWVSKVW SVEKHKK D+TSIIHGKY+HEET+AT+SF
Sbjct: 135 FGASVSEMQILNDKGCMIVDTTCPWVSKVWNSVEKHKKSDHTSIIHGKYNHEETIATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG Y+IV N+ +A YV +YIL G K FLEKFK A S+GFDPD +L +GIAN
Sbjct: 195 AGTYLIVLNLAQANYVANYILHG------GDKNEFLEKFKNAHSQGFDPDRNLDYIGIAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETE IGKL E TM+RK+G + +HF+SFNTICDATQERQDAM+++V+E + L
Sbjct: 249 QTTMLKSETEAIGKLFEHTMLRKYGPIDFKDHFMSFNTICDATQERQDAMFELVKEPLSL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQEIA +R IPSY IDS +RI PGN+I +K + G+L+ +NWL +G
Sbjct: 309 MVVIGGYNSSNTTHLQEIAIERAIPSYHIDSAERILPGNRIEHKPLGGDLIITDNWLNEG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIK 331
+I +G+TSGASTPDK VE+V++K+F +K
Sbjct: 369 KIIVGVTSGASTPDKVVEEVIEKIFALK 396
>gi|22298585|ref|NP_681832.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Thermosynechococcus elongatus BP-1]
gi|50401049|sp|Q8DK29.1|ISPH_THEEB RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|22294765|dbj|BAC08594.1| tlr1041 [Thermosynechococcus elongatus BP-1]
Length = 402
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/328 (66%), Positives = 262/328 (79%), Gaps = 6/328 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R FP E+IWITNEIIHNP+VN+RL +MAV+ IPV G K F V GDVV+LPA
Sbjct: 75 LAYETRTHFPTERIWITNEIIHNPSVNERLRQMAVEFIPVVNGVKDFSGVRPGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V+EM LN + IVDTTCPWVSKVW SVEKHKK +TSIIHGKY+HEET+AT+SF
Sbjct: 135 FGASVQEMQLLNERGCTIVDTTCPWVSKVWHSVEKHKKVSFTSIIHGKYNHEETIATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG Y+IV N++EA YVCDYIL G + AF+ KF KA S GFDPD DLV+VGIAN
Sbjct: 195 AGTYLIVLNLEEARYVCDYILHG------GDRAAFMAKFAKACSPGFDPDRDLVRVGIAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETE+IGKL E+TM++K+G + +NEHF+SFNTICDATQERQDAM +V+E +DL
Sbjct: 249 QTTMLKGETEQIGKLFERTMIQKYGPDRLNEHFMSFNTICDATQERQDAMLSLVKEPLDL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQEIA + GIPSY IDS RIGPGN+I +K +H ENWLP
Sbjct: 309 MVVIGGYNSSNTTHLQEIAIEHGIPSYHIDSADRIGPGNRIEHKPLHQNPTVAENWLPDR 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIK 331
ITIGITSGASTPDK VE+VL K+F ++
Sbjct: 369 PITIGITSGASTPDKVVEEVLNKIFALR 396
>gi|425434947|ref|ZP_18815411.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microcystis
aeruginosa PCC 9432]
gi|389675424|emb|CCH95481.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microcystis
aeruginosa PCC 9432]
Length = 402
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 211/328 (64%), Positives = 264/328 (80%), Gaps = 6/328 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ FP+E++WITNEIIHNP+VN+RL MAV IPVE G+K F VV GDVV+LPA
Sbjct: 75 MAYETRQHFPQERLWITNEIIHNPSVNQRLRSMAVGFIPVENGQKDFTVVESGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V EM LN+K IVDTTCPWVSKVW SVEKHKK D+TSIIHGKY+HEET+AT+SF
Sbjct: 135 FGASVSEMKILNDKGCMIVDTTCPWVSKVWNSVEKHKKSDHTSIIHGKYNHEETIATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG Y+IV N+ +A V +YIL G K FLE+FK A S+GFDPD DL +GIAN
Sbjct: 195 AGTYLIVLNLAQANDVANYILHG------GDKNEFLEEFKNAHSQGFDPDRDLDYIGIAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETEEIGKL E TM+RK+G N +HF+SFNTICDATQERQDAM+++V+E + L
Sbjct: 249 QTTMLKSETEEIGKLFEHTMLRKYGPINFKDHFMSFNTICDATQERQDAMFELVKEPLSL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQEIA +R IPSY IDS +RI PGN+I +K + G+L+ +NWL +G
Sbjct: 309 MVVIGGYNSSNTTHLQEIAIERAIPSYHIDSAERILPGNRIEHKPLGGDLIITDNWLNEG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIK 331
+I +G+TSGASTPDK VE+V++K+F +K
Sbjct: 369 KIIVGVTSGASTPDKVVEEVIEKIFALK 396
>gi|119512490|ref|ZP_01631570.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nodularia
spumigena CCY9414]
gi|119462840|gb|EAW43797.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nodularia
spumigena CCY9414]
Length = 402
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 207/328 (63%), Positives = 261/328 (79%), Gaps = 6/328 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ FP E+IWITNEIIHNP+VN+R++EM + IPVE G K F VV GDVV+LPA
Sbjct: 75 MAYETRQHFPTERIWITNEIIHNPSVNQRMQEMNIGFIPVEAGNKDFSVVETGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V+EM L+N+ +IVDTTCPWVSKVW +VEKHKK YTSIIHGKY HEET+AT+SF
Sbjct: 135 FGASVQEMQILHNQGCKIVDTTCPWVSKVWNTVEKHKKIAYTSIIHGKYKHEETIATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKY+IV N++EA YV DYIL G ++ FL+KF KA S GFDPD DL +VGIAN
Sbjct: 195 AGKYLIVLNLQEAHYVADYILNG------GDRQEFLQKFAKACSAGFDPDQDLQRVGIAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETE+IGKL E+TMM+K+G +N+HF SFNTICDATQERQDAM ++V+ +DL
Sbjct: 249 QTTMLKDETEQIGKLFERTMMQKYGTIELNQHFQSFNTICDATQERQDAMLELVQHDLDL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
+LV+GG+NSSNT+ LQ+IA +R IPSY ID +RI + I ++ ++GEL +NWLP G
Sbjct: 309 MLVIGGFNSSNTAQLQQIAAEREIPSYHIDCVERIKSADAIEHRQLNGELAIAQNWLPNG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIK 331
+I +G+TSGASTPDK V DV++K+F +K
Sbjct: 369 KIVVGVTSGASTPDKVVADVMEKIFALK 396
>gi|425469468|ref|ZP_18848403.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microcystis
aeruginosa PCC 9701]
gi|389880812|emb|CCI38540.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microcystis
aeruginosa PCC 9701]
Length = 402
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 211/328 (64%), Positives = 262/328 (79%), Gaps = 6/328 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ FP+E+IWITNEIIHNP+VN+RL MAV IPVE G+K F VV GDVV+LPA
Sbjct: 75 MAYETRQHFPQERIWITNEIIHNPSVNQRLRSMAVGFIPVENGQKDFSVVESGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V EM LN+K IVDTTCPWVSKVW SVEKHKK D+TSIIHGKY+HEET+AT+SF
Sbjct: 135 FGASVSEMQILNDKGCMIVDTTCPWVSKVWNSVEKHKKSDHTSIIHGKYNHEETIATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG Y+IV N+ +A YV +YIL G K FLEKFK A S+ FDPD DL +GIAN
Sbjct: 195 AGTYLIVLNLAQANYVANYILHG------GDKNEFLEKFKNAHSQDFDPDRDLDYIGIAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETEEIGKL E TM+RK+G + +HF+SFNTICDATQERQDAM+++V+E + L
Sbjct: 249 QTTMLKSETEEIGKLFEHTMLRKYGPIDFKDHFMSFNTICDATQERQDAMFELVKEPLSL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQEIA +R IPSY IDS +RI PGN+I +K + +L+ +NWL +G
Sbjct: 309 MVVIGGYNSSNTTHLQEIAIERAIPSYHIDSAERILPGNRIEHKPLGDDLIITDNWLNEG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIK 331
+I +G+TSGASTPDK VE+V++K+F K
Sbjct: 369 KIVVGVTSGASTPDKVVEEVIEKIFAFK 396
>gi|166364360|ref|YP_001656633.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microcystis
aeruginosa NIES-843]
gi|189045811|sp|B0JVA7.1|ISPH_MICAN RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|166086733|dbj|BAG01441.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microcystis
aeruginosa NIES-843]
Length = 402
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 211/328 (64%), Positives = 263/328 (80%), Gaps = 6/328 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ FP+E+IWITNEIIHNP+VN+RL MAV IPVE G+K F VV GDVV+LPA
Sbjct: 75 MAYETRQHFPQERIWITNEIIHNPSVNQRLRSMAVGFIPVENGQKDFTVVESGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V EM LN+K IVDTTCPWVSKVW SVEKHKK D+TSIIHGKY+HEET+AT+SF
Sbjct: 135 FGASVSEMQILNDKGCMIVDTTCPWVSKVWNSVEKHKKSDHTSIIHGKYNHEETIATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG Y+IV N+ +A YV +YIL G K FLEKFK A S+GFDPD DL +GIAN
Sbjct: 195 AGTYLIVLNLDQANYVANYILHG------GDKNEFLEKFKNAHSQGFDPDRDLDYIGIAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETEEIGKL E TM+RK+G + +HF+SFNTICDATQERQDA++++V+E + L
Sbjct: 249 QTTMLKSETEEIGKLFEHTMLRKYGPIDFKDHFMSFNTICDATQERQDAIFELVKEPLSL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQEIA +R IPSY IDS +RI PGN+I +K + +L+ +NWL +G
Sbjct: 309 MVVIGGYNSSNTTHLQEIAIERAIPSYHIDSAERILPGNRIEHKPLGDDLIITDNWLNEG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIK 331
+I +G+TSGASTPDK VE+V++K+F K
Sbjct: 369 KIVVGVTSGASTPDKVVEEVIEKIFAFK 396
>gi|428774031|ref|YP_007165819.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Cyanobacterium
stanieri PCC 7202]
gi|428688310|gb|AFZ48170.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Cyanobacterium
stanieri PCC 7202]
Length = 399
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 215/328 (65%), Positives = 258/328 (78%), Gaps = 6/328 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R FP EKIWITNEIIHNP+VN+RL EM V IPV +G K F VV+ G+VV+LPA
Sbjct: 75 MAYETRTHFPTEKIWITNEIIHNPSVNERLREMNVGFIPVIDGDKDFSVVDSGEVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V+EM LNNK IVDTTCPWVSKVW SVEKHKK YTSIIHGKY+HEET+AT+SF
Sbjct: 135 FGASVQEMELLNNKGCTIVDTTCPWVSKVWNSVEKHKKRSYTSIIHGKYNHEETIATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
A Y++V NM +A YV DYIL G KE FL FK A S+GFDPD DL +VGIAN
Sbjct: 195 ANTYLVVLNMDQANYVSDYILHG------GDKEEFLNIFKNAHSQGFDPDKDLERVGIAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETEEIG+L ++TM++K+G +NEHF+SFNTICDATQERQDAM +V+EK+DL
Sbjct: 249 QTTMLKTETEEIGRLFQQTMLKKYGPTELNEHFMSFNTICDATQERQDAMLDLVKEKLDL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQEIA D IPSY IDS RI N I YK + +L K WLPKG
Sbjct: 309 MVVIGGFNSSNTTHLQEIAIDYNIPSYHIDSASRIDDNNNIEYKPLKKDLEIKSGWLPKG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIK 331
+IT+G+TSGASTPDK VED+++K+F +K
Sbjct: 369 KITVGVTSGASTPDKVVEDIIEKIFALK 396
>gi|428780085|ref|YP_007171871.1| LOW QUALITY PROTEIN: (E)-4-hydroxy-3-methyl-but-2-enyl
pyrophosphate reductase [Dactylococcopsis salina PCC
8305]
gi|428694364|gb|AFZ50514.1| LOW QUALITY PROTEIN: (E)-4-hydroxy-3-methyl-but-2-enyl
pyrophosphate reductase [Dactylococcopsis salina PCC
8305]
Length = 404
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 216/325 (66%), Positives = 260/325 (80%), Gaps = 6/325 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYE R+ FP+E+IWITNEIIHNP+VN+ L +M V IPVE G+K F VV++GDVV+LPA
Sbjct: 77 IAYETRQHFPKERIWITNEIIHNPSVNQHLRDMNVGFIPVENGEKDFSVVDEGDVVILPA 136
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V EM LN+ IVDTTCPWVSKVW SVEKHKK YTSIIHGKY HEETVAT+SF
Sbjct: 137 FGASVTEMQLLNDLGCTIVDTTCPWVSKVWNSVEKHKKKSYTSIIHGKYHHEETVATSSF 196
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
A KY++V N++EA+YV +YIL G KEAFLEKF +A S GFDPDVDL KVGIAN
Sbjct: 197 AEKYLVVLNLEEAQYVANYILHG------GDKEAFLEKFYQAYSPGFDPDVDLDKVGIAN 250
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETE+IGKL E+TM+ K+G NEHF+SFNTICDATQERQDAM +V+E + L
Sbjct: 251 QTTMLKSETEQIGKLFERTMLEKYGPTEFNEHFMSFNTICDATQERQDAMLNLVKEDLSL 310
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQEI + GIPSY ID RI GNKI +K + +L ENWLP+G
Sbjct: 311 LVVIGGFNSSNTTHLQEIGIEYGIPSYHIDGGSRIFEGNKIEHKPLGKDLETMENWLPEG 370
Query: 304 QITIGITSGASTPDKAVEDVLKKVF 328
+IT+GITSGASTPD+AVEDV++K+
Sbjct: 371 EITVGITSGASTPDQAVEDVIEKIL 395
>gi|209402463|gb|ACI45954.1| putative plastid isopentenyl diphosphate/dimethylallyl diphosphate
synthase precursor [Mantoniella squamata]
Length = 456
Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust.
Identities = 207/328 (63%), Positives = 258/328 (78%), Gaps = 6/328 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYEARKQ+P E +WITNEIIHNPTVNK+L +M V+ I + K F V G+VV+LPA
Sbjct: 125 MAYEARKQYPTENLWITNEIIHNPTVNKKLADMGVKFIEETKDGKDFSGVQNGEVVILPA 184
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V EM L +K V IVDTTCPWVSKVW +V+ HK+ ++SIIHGK++HEETVATASF
Sbjct: 185 FGASVHEMKLLADKGVSIVDTTCPWVSKVWNAVDSHKRKQFSSIIHGKWAHEETVATASF 244
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG Y++VK+MKEA+YVCDYIL G +E FL KFK A S GFDPD DL VGIAN
Sbjct: 245 AGTYLVVKDMKEAQYVCDYILNG------GDREEFLAKFKNAYSAGFDPDTDLEGVGIAN 298
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGET++IGKL+E+TMM K GV N+ +H++ +TICDATQERQDAMYK+VE K D+
Sbjct: 299 QTTMLKGETDQIGKLLERTMMEKHGVANLADHYMVMDTICDATQERQDAMYKLVEAKPDI 358
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
+LVVGG+NSSNT HLQEI+ED IPS+W+D+ R+ N I ++L HGELVE ++WLP+G
Sbjct: 359 MLVVGGFNSSNTQHLQEISEDNSIPSFWVDTPARLSTDNTILHRLAHGELVETKDWLPEG 418
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIK 331
+ IG+TSGASTPDK VE+V+ +F K
Sbjct: 419 PVVIGVTSGASTPDKVVEEVIDVIFATK 446
>gi|427725955|ref|YP_007073232.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Leptolyngbya
sp. PCC 7376]
gi|427357675|gb|AFY40398.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Leptolyngbya
sp. PCC 7376]
Length = 403
Score = 446 bits (1146), Expect = e-123, Method: Compositional matrix adjust.
Identities = 210/333 (63%), Positives = 262/333 (78%), Gaps = 6/333 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE RK FP EKIW+TNEIIHNP+VN RL +M V I V G+K F V +GDVV+LPA
Sbjct: 75 MAYETRKHFPTEKIWVTNEIIHNPSVNNRLRDMNVHFIDVINGEKDFSGVTQGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA V+EM LNN+ IVDTTCPWVSKVWTSVEKHKK DYTS+IHGKY HEETVAT+SF
Sbjct: 135 FGATVQEMELLNNRGCTIVDTTCPWVSKVWTSVEKHKKQDYTSLIHGKYKHEETVATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKY+++ N+ EA YV DYIL G ++AFL+KFK A S+GFDP++DL +VG+AN
Sbjct: 195 AGKYLVLLNLDEANYVRDYILNG------GDRQAFLDKFKNAYSEGFDPEIDLERVGVAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETE++GKL E+TM+ KFG +N+HF+SFNTICDATQERQDAM+ +V+E +DL
Sbjct: 249 QTTMLKSETEQMGKLFEQTMLEKFGPTELNQHFMSFNTICDATQERQDAMFDLVKEDLDL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQEIA D IPSY IDS R+ N+I +K + ++ ++NWLP G
Sbjct: 309 MVVIGGFNSSNTTHLQEIAVDYKIPSYHIDSGDRLLADNRIEHKPLGEDITTQDNWLPSG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEAL 336
++ IGITSGASTPDK VEDV+ +F K E A+
Sbjct: 369 KLKIGITSGASTPDKVVEDVIAHIFTEKAEPAV 401
>gi|428776515|ref|YP_007168302.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Halothece sp.
PCC 7418]
gi|428690794|gb|AFZ44088.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Halothece sp.
PCC 7418]
Length = 404
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 214/328 (65%), Positives = 261/328 (79%), Gaps = 6/328 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYE R+ FP E+IWITNEIIHNP+VN+ L +M V IPV EG+K F VV+KGDVV+LPA
Sbjct: 77 IAYETRQHFPNERIWITNEIIHNPSVNQHLRDMNVGFIPVNEGEKDFSVVDKGDVVILPA 136
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V EM LN+ IVDTTCPWVSKVW SVEKHKK YTSIIHGKY HEETVAT+SF
Sbjct: 137 FGASVNEMQLLNDLGCTIVDTTCPWVSKVWNSVEKHKKRSYTSIIHGKYHHEETVATSSF 196
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
A KY++V N++EA+YV DYIL G KE F++KF +A S GFDPDVDL KVGIAN
Sbjct: 197 AEKYLVVLNLEEAQYVADYILRG------GDKEEFMKKFDQASSPGFDPDVDLEKVGIAN 250
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETE+IGKL E+TM+ K+G N HF+SFNTICDATQERQDAM+ +V+E + +
Sbjct: 251 QTTMLKSETEQIGKLFERTMLEKYGPTEFNNHFMSFNTICDATQERQDAMFDLVKEDLSV 310
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQEI + GIPSY ID+ RI GNKI +K + +L ENWLP+G
Sbjct: 311 LVVIGGFNSSNTTHLQEIGIEHGIPSYHIDAGNRILEGNKIEHKPLGKDLEIAENWLPEG 370
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIK 331
+IT+GITSGASTPD+AVE+V++K+ E K
Sbjct: 371 EITVGITSGASTPDQAVEEVIQKILEAK 398
>gi|422302296|ref|ZP_16389659.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microcystis
aeruginosa PCC 9806]
gi|389788521|emb|CCI15768.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microcystis
aeruginosa PCC 9806]
Length = 402
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 210/328 (64%), Positives = 263/328 (80%), Gaps = 6/328 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ FP+E++WITNEIIHNP+VN+RL MAV IPVE G+K F VV GDVV+LPA
Sbjct: 75 MAYETRQHFPQERLWITNEIIHNPSVNQRLRSMAVGFIPVENGQKDFSVVESGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V EM LN+K IVDTTCPWVSKVW SVEKHKK +TSIIHGKY+HEET+AT+SF
Sbjct: 135 FGASVSEMQILNDKGCMIVDTTCPWVSKVWNSVEKHKKSAHTSIIHGKYNHEETIATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG Y+IV N+ +A V +YIL G K FLEKFK A S+GFDPD DL +GIAN
Sbjct: 195 AGTYLIVLNLAQANDVANYILHG------GDKNEFLEKFKNAHSQGFDPDRDLDYIGIAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETEEIGKL E TM+RK+G + +HF+SFNTICDATQERQDAM+++V+E + L
Sbjct: 249 QTTMLKSETEEIGKLFEHTMLRKYGPIDFKDHFMSFNTICDATQERQDAMFELVKEPLSL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQEIA +R IPSY IDS +RI PGN+I +K + G+L+ +NWL +G
Sbjct: 309 MVVIGGYNSSNTTHLQEIAIERAIPSYHIDSAERILPGNRIEHKPLGGDLIITDNWLNEG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIK 331
+I +G+TSGASTPDK VE+V++K+F +K
Sbjct: 369 KIIVGVTSGASTPDKVVEEVIEKIFALK 396
>gi|425463495|ref|ZP_18842826.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microcystis
aeruginosa PCC 9809]
gi|389831876|emb|CCI24997.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microcystis
aeruginosa PCC 9809]
Length = 402
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 210/328 (64%), Positives = 262/328 (79%), Gaps = 6/328 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ FP+E++WITNEIIHNP+VN+RL MAV IPVE G+K F VV GDVV+LPA
Sbjct: 75 MAYETRQHFPQERLWITNEIIHNPSVNQRLRSMAVGFIPVENGQKDFTVVESGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V EM LN+K IVDTTCPWVSKVW SVEKHKK D+TSIIHGKY+HEET+AT+SF
Sbjct: 135 FGASVSEMQILNDKGCMIVDTTCPWVSKVWNSVEKHKKSDHTSIIHGKYNHEETIATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG Y+IV N+ +A YV +YIL G K FLEKFK A S+GFDPD DL +GIAN
Sbjct: 195 AGTYLIVLNLAQANYVANYILHG------GDKNEFLEKFKNAHSQGFDPDRDLDYIGIAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETEEIGKL E TM+RK+G + +HF+SFNTICDATQERQDAM+++V+E + L
Sbjct: 249 QTTMLKSETEEIGKLFEHTMLRKYGPIDFKDHFMSFNTICDATQERQDAMFELVKEPLSL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQEIA +R IPSY IDS + I PGN+I +K + +L+ +NWL +G
Sbjct: 309 MVVIGGYNSSNTTHLQEIAIERAIPSYHIDSAECILPGNRIEHKPLGDDLIITDNWLNEG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIK 331
+I +G+TSGASTPDK VE+V++K+F K
Sbjct: 369 KIVVGVTSGASTPDKVVEEVIEKIFAFK 396
>gi|412991558|emb|CCO16403.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Bathycoccus
prasinos]
Length = 471
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 213/337 (63%), Positives = 266/337 (78%), Gaps = 6/337 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+ YEARKQ+P EK+WITNEIIHNPTVN RL EM V I + G K F+ V G+VVVLPA
Sbjct: 139 MCYEARKQYPTEKMWITNEIIHNPTVNMRLSEMGVNFIEEKGGVKNFEPVQSGEVVVLPA 198
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA++ EM L K V IVDTTCPWVSKVW +V+ H + ++TSIIHGKY+HEETVATASF
Sbjct: 199 FGASIHEMKLLAEKGVSIVDTTCPWVSKVWNAVDTHARKEFTSIIHGKYAHEETVATASF 258
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
A Y++VK+MKEA +VCDYIL G ++TKE F+EKFK A S GFDP+ DL VG+AN
Sbjct: 259 AKTYLVVKDMKEASWVCDYILNG-----TATKEEFMEKFKNAHSDGFDPEKDLDAVGVAN 313
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETE IGKL E+TMM K GV+N+ EH++ +TICDATQERQDA+YK+V+EK D+
Sbjct: 314 QTTMLKGETEAIGKLFERTMMEKHGVQNLGEHYLVTDTICDATQERQDAIYKLVDEKPDI 373
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGP-GNKIAYKLMHGELVEKENWLPK 302
+++VGG+NSSNTSHLQEI+ED I S+W+D+ RI NKI+++ HGE+ E ENWLP+
Sbjct: 374 MMIVGGFNSSNTSHLQEISEDANITSFWVDTADRIDTENNKISWRTSHGEMRETENWLPE 433
Query: 303 GQITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 339
G++T+GITSGASTPDK VEDVL+ +F K + A +A
Sbjct: 434 GKLTVGITSGASTPDKVVEDVLEAIFASKAKTAAGVA 470
>gi|172036023|ref|YP_001802524.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Cyanothece sp.
ATCC 51142]
gi|354552830|ref|ZP_08972137.1| hydroxymethylbutenyl pyrophosphate reductase [Cyanothece sp. ATCC
51472]
gi|226741030|sp|B1WTZ2.1|ISPH_CYAA5 RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|171697477|gb|ACB50458.1| putative LytB protein [Cyanothece sp. ATCC 51142]
gi|353554660|gb|EHC24049.1| hydroxymethylbutenyl pyrophosphate reductase [Cyanothece sp. ATCC
51472]
Length = 402
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 221/333 (66%), Positives = 268/333 (80%), Gaps = 6/333 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ FP+EKIWITNEIIHNP+VN+RL EM V I V G K F VV GDVV+LPA
Sbjct: 75 MAYETRQHFPQEKIWITNEIIHNPSVNQRLLEMNVGFIEVINGSKDFSVVEAGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V EM LN+K IVDTTCPWVSKVW SVEKHKK DYTSIIHGKY HEETVAT+SF
Sbjct: 135 FGASVTEMQLLNDKGCTIVDTTCPWVSKVWNSVEKHKKKDYTSIIHGKYKHEETVATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG Y++V N+KEA+YVCDYIL G K+ FLEKFK A S+GFDPD DL+++GIAN
Sbjct: 195 AGTYLVVLNLKEAQYVCDYILNG------GNKDEFLEKFKNAHSEGFDPDKDLIRLGIAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETE+IGKL E TM++K+G +NEHF+SFNTICDATQERQDAM +VEE+VD+
Sbjct: 249 QTTMLKSETEQIGKLFETTMLKKYGPTELNEHFMSFNTICDATQERQDAMLNLVEEEVDV 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQEI+ ++GI SY IDS+KRI PGNKI +K + ++ KENWLP G
Sbjct: 309 MVVIGGFNSSNTTHLQEISIEKGIDSYHIDSDKRILPGNKIEHKPLEKDIETKENWLPDG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEAL 336
+I +G+TSGASTPDK VE V++++FE K L
Sbjct: 369 KIIVGVTSGASTPDKVVEAVIERIFEEKNAGVL 401
>gi|428220520|ref|YP_007104690.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Synechococcus sp. PCC 7502]
gi|427993860|gb|AFY72555.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Synechococcus sp. PCC 7502]
Length = 402
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 213/329 (64%), Positives = 261/329 (79%), Gaps = 7/329 (2%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE-EGKKQFDVVNKGDVVVLP 62
IAYEARKQFP E+IWITNEIIHNP VN+RL+EM VQ I + +G K F VV GDVV+LP
Sbjct: 79 IAYEARKQFPTERIWITNEIIHNPAVNQRLKEMQVQFIEADAKGNKDFSVVKTGDVVILP 138
Query: 63 AFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATAS 122
AFGA+++E LN IVDTTCPWVSKVW VEKHKK D+TSI+HGKYSHEET+AT S
Sbjct: 139 AFGASIQETQLLNEIGCTIVDTTCPWVSKVWNRVEKHKKADFTSIVHGKYSHEETIATIS 198
Query: 123 FAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIA 182
+A +Y++V NM+EAEYV +Y+L NG T+ FL KF KAVS GFDPD+ L +VGIA
Sbjct: 199 YAKRYLVVLNMEEAEYVSNYML----NGGDRTE--FLTKFSKAVSTGFDPDLHLQRVGIA 252
Query: 183 NQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVD 242
NQTTMLKGETE IGKL EKT+M K+GVEN+N+HF+S+NTICDATQERQDAM ++VEE +D
Sbjct: 253 NQTTMLKGETEAIGKLFEKTVMVKYGVENLNQHFLSYNTICDATQERQDAMLEIVEEPLD 312
Query: 243 LILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPK 302
L++V+GG+NSSNT+HLQEIA +G+PSY +DS RI N I +K + L + NWLP+
Sbjct: 313 LMIVIGGYNSSNTTHLQEIAIAKGLPSYHVDSSDRIISANTIEHKPLGEPLTQSPNWLPQ 372
Query: 303 GQITIGITSGASTPDKAVEDVLKKVFEIK 331
G++ IGITSGASTPDK V DV+ K+F +K
Sbjct: 373 GKVKIGITSGASTPDKVVADVISKIFSLK 401
>gi|434388777|ref|YP_007099388.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Chamaesiphon minutus PCC 6605]
gi|428019767|gb|AFY95861.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Chamaesiphon minutus PCC 6605]
Length = 415
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 211/333 (63%), Positives = 260/333 (78%), Gaps = 8/333 (2%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYE R+ FP E+IWITNEIIHNP+VN+RL EM V I VE G K FD++++GDVV+LPA
Sbjct: 75 IAYETRQHFPTERIWITNEIIHNPSVNQRLREMNVNFIQVENGVKNFDLIDRGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V+EM LN+K IVDTTCPWVSKVW ++EKHKK DYTSIIHG+Y HEETVAT+SF
Sbjct: 135 FGASVQEMQLLNDKGCTIVDTTCPWVSKVWNTIEKHKKVDYTSIIHGQYKHEETVATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSS-----STKEAFLEKFKKAVSKGFDPDVDLVK 178
A KY++V NM EA YV DYIL NG+S + FL KF A S GFDPD+DL K
Sbjct: 195 ANKYLVVLNMAEANYVADYILN---NGNSPQEKLQRRNEFLAKFSNACSAGFDPDLDLEK 251
Query: 179 VGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVE 238
VGIANQTTMLK ETE IGKL E+TMM+K+ +N+HF SFNTICDATQERQDAM+++V+
Sbjct: 252 VGIANQTTMLKTETEAIGKLFERTMMKKYSTAELNDHFQSFNTICDATQERQDAMFELVD 311
Query: 239 EKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKEN 298
EK+DL++V+GG+NSSNT+HLQEI+ + IPSY IDS+ RI N+I +K + EL +N
Sbjct: 312 EKLDLMVVIGGYNSSNTTHLQEISIEHQIPSYHIDSDVRILADNQIEHKPLFKELEITKN 371
Query: 299 WLPKGQITIGITSGASTPDKAVEDVLKKVFEIK 331
WLP G IT+G+TSGASTPDK VE ++++F K
Sbjct: 372 WLPDGPITVGVTSGASTPDKVVEAAIERIFATK 404
>gi|303278956|ref|XP_003058771.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459931|gb|EEH57226.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 523
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 205/329 (62%), Positives = 260/329 (79%), Gaps = 6/329 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYEARKQ+P+ K+WITNEIIHNPTVNKRL +M V I + K F V G+VV+LPA
Sbjct: 192 MAYEARKQYPDAKLWITNEIIHNPTVNKRLGDMGVNFIEETKDGKDFSGVGNGEVVILPA 251
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V EM L K IVDTTCPWVSKVW +V+ H + ++TSIIHGK++HEETVATASF
Sbjct: 252 FGASVHEMKLLAEKGASIVDTTCPWVSKVWNAVDAHTRKEFTSIIHGKWAHEETVATASF 311
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG Y+++K+MKEA Y+CDYIL G KE F+ KF A S+GFDPDVDL +GIAN
Sbjct: 312 AGTYLVIKDMKEATYLCDYILNG------GDKEEFMAKFVNAHSEGFDPDVDLDGLGIAN 365
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGET+ IGKL+E+TMM K GV N+ +H++ +TICDATQERQDAMY++VE+K D+
Sbjct: 366 QTTMLKGETQAIGKLLERTMMEKHGVANLADHYMVMDTICDATQERQDAMYQLVEDKPDM 425
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
+LVVGG+NSSNT HLQEI+ED +PS+W+D+ +R+ N IA++L HGELVE ++WLP+G
Sbjct: 426 MLVVGGYNSSNTQHLQEISEDASVPSFWVDTPERLDEDNVIAHRLAHGELVETKDWLPEG 485
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKR 332
+ IG+TSGASTPDK VEDV+ +F+ KR
Sbjct: 486 DVVIGVTSGASTPDKVVEDVVDMIFKTKR 514
>gi|443311976|ref|ZP_21041598.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Synechocystis sp. PCC 7509]
gi|442778051|gb|ELR88322.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Synechocystis sp. PCC 7509]
Length = 398
Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust.
Identities = 211/328 (64%), Positives = 260/328 (79%), Gaps = 7/328 (2%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ FP E+IWITNEIIHNP+VN+RL EM VQ I V G K F VVN GDVV+LPA
Sbjct: 75 MAYETRQHFPTERIWITNEIIHNPSVNQRLREMQVQFIEVTNGNKDFSVVNSGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V+EM LN+ +IVDTTCPWVSKVW +VEKHKKGDYTSIIHGKY+HEET+AT+SF
Sbjct: 135 FGASVQEMQLLNDLGCKIVDTTCPWVSKVWNTVEKHKKGDYTSIIHGKYNHEETIATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKY+IV N+++AEYV +YIL G G F+ KF +A S+GF+PD DL ++GIAN
Sbjct: 195 AGKYLIVLNLEQAEYVANYILNGGDAGE------FMTKFSRAHSEGFNPDEDLKQIGIAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETE IGKL E+TMMRK+ + EHF +FNTICDATQERQDAM+++VEEK+DL
Sbjct: 249 QTTMLKSETELIGKLFERTMMRKYSPSQLTEHFQTFNTICDATQERQDAMFQLVEEKLDL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQEIA +RGI SY ID +RI N I ++L+ G L +WLPKG
Sbjct: 309 MVVIGGFNSSNTTHLQEIAIERGIASYHIDCAERIDT-NGIEHRLLDGNLQLTPHWLPKG 367
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIK 331
ITIG+TSGASTPD V D ++K+F +K
Sbjct: 368 AITIGVTSGASTPDIVVADTVEKIFALK 395
>gi|218441820|ref|YP_002380149.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Cyanothece sp.
PCC 7424]
gi|226722802|sp|B7KEG3.1|ISPH_CYAP7 RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|218174548|gb|ACK73281.1| hydroxymethylbutenyl pyrophosphate reductase [Cyanothece sp. PCC
7424]
Length = 402
Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust.
Identities = 210/333 (63%), Positives = 262/333 (78%), Gaps = 6/333 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
++YE R+ FP ++IW+TNE+IHNP+VN+RL +M V+ IPV E +K F VV + DVV+LPA
Sbjct: 75 MSYETRQHFPNQRIWLTNEVIHNPSVNQRLRDMKVEFIPVIEDQKDFSVVERDDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V EM LN+K IVDTTCPWV+KVW SVEKHKK +YTSIIHGKY HEETVAT+SF
Sbjct: 135 FGASVTEMQLLNDKGCTIVDTTCPWVAKVWNSVEKHKKRNYTSIIHGKYKHEETVATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG Y++V NM++A+YVC+YIL G K+ FL KFKKA S+GFDPD DL +VGIAN
Sbjct: 195 AGTYLVVLNMEQAKYVCNYILNG------GDKQEFLAKFKKAYSEGFDPDTDLERVGIAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETEEIGKL E TM++K+G ++N HF+SFNTICDATQERQDAM +V+EK+DL
Sbjct: 249 QTTMLKSETEEIGKLFEHTMLKKYGPLDLNNHFMSFNTICDATQERQDAMLDLVKEKLDL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQEI+ GI SY IDS RI N I +K + +L KENWLP G
Sbjct: 309 MVVIGGFNSSNTTHLQEISIHHGIVSYHIDSAARIDLNNHIEHKPLGKDLEVKENWLPDG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEAL 336
+I +G+TSGASTPD VE VL+K+F IK A+
Sbjct: 369 KIVVGVTSGASTPDIVVEQVLQKIFAIKSAVAM 401
>gi|376002538|ref|ZP_09780365.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Arthrospira sp.
PCC 8005]
gi|375329109|emb|CCE16118.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Arthrospira sp.
PCC 8005]
Length = 402
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 207/328 (63%), Positives = 258/328 (78%), Gaps = 6/328 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ FP E+IWITNEIIHNP+VN+ L +M V+ IPV + K F VV GDVV+LPA
Sbjct: 75 MAYETRQHFPTERIWITNEIIHNPSVNQHLRDMNVEFIPVNDSHKDFSVVGSGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V+EM LN+K +I+DTTCPWVSKVW +VEKHKK YTSIIHGKY HEETVAT+SF
Sbjct: 135 FGASVQEMQILNDKGCKIIDTTCPWVSKVWNTVEKHKKKQYTSIIHGKYKHEETVATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
A KY+++ N++EAEYV DYIL G +E FL KF A S FDPD DL VGIAN
Sbjct: 195 ADKYLVLLNLEEAEYVADYILNG------GNREEFLAKFANAYSANFDPDRDLESVGIAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETE+IGKL E+TMM+K+G N+NEHF SFNTICDATQERQDAM ++EEK+DL
Sbjct: 249 QTTMLKSETEQIGKLFERTMMQKYGPANLNEHFQSFNTICDATQERQDAMIGLLEEKLDL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQE+A +RGIPSY IDS RI GN+I +K ++ +L WLP+G
Sbjct: 309 MVVIGGFNSSNTTHLQEMAIERGIPSYHIDSSDRILEGNQIQHKPLNKDLEMATKWLPEG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIK 331
+I +G+TSGASTPD+ VE+ ++K+F K
Sbjct: 369 EIIVGVTSGASTPDRVVEEAIQKIFAQK 396
>gi|255078788|ref|XP_002502974.1| predicted protein [Micromonas sp. RCC299]
gi|226518240|gb|ACO64232.1| predicted protein [Micromonas sp. RCC299]
Length = 380
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 207/331 (62%), Positives = 262/331 (79%), Gaps = 7/331 (2%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYEA+KQFP+ +WITNEIIHNPTVN RL EM VQ I K F +G+VV+LPA
Sbjct: 49 MAYEAKKQFPDANLWITNEIIHNPTVNDRLGEMGVQFIEETAEGKDFSGCKEGEVVILPA 108
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V EM LN+K V IVDTTCPWVSKVW +V+ H + ++TSIIHGK++HEET+ATASF
Sbjct: 109 FGASVHEMKLLNDKGVNIVDTTCPWVSKVWNAVDAHTRKEFTSIIHGKWAHEETIATASF 168
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
A Y++VK+MKEA+YVCDY+L G +E FL KFK A S+GFDPD DL +GIAN
Sbjct: 169 AKTYLVVKDMKEAQYVCDYVLDG------GDREEFLAKFKNAYSEGFDPDTDLGALGIAN 222
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETE IGKL+EKTMM+K GV+ +N+H++ +TICDATQERQDAMYK+V++K D+
Sbjct: 223 QTTMLKGETEAIGKLLEKTMMQKHGVDKLNDHYMVMDTICDATQERQDAMYKLVDDKPDM 282
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRI-GPGNKIAYKLMHGELVEKENWLPK 302
+LVVGG+NSSNTSHLQEI+ED IPS+W+D+ R+ N I ++L HGELVE ++WLP
Sbjct: 283 MLVVGGFNSSNTSHLQEISEDASIPSFWVDTHARLDADTNTITHRLAHGELVETKDWLPA 342
Query: 303 GQITIGITSGASTPDKAVEDVLKKVFEIKRE 333
G++TIG+TSGASTPDK VEDV+ + K++
Sbjct: 343 GKVTIGVTSGASTPDKVVEDVIDVIMATKKK 373
>gi|443477268|ref|ZP_21067127.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudanabaena
biceps PCC 7429]
gi|443017634|gb|ELS32032.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudanabaena
biceps PCC 7429]
Length = 402
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 207/329 (62%), Positives = 263/329 (79%), Gaps = 7/329 (2%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV-EEGKKQFDVVNKGDVVVLP 62
+AYE R QFP E+IWITNEIIHNP+VN +L+EM VQ +PV + G K F V +GDVV+LP
Sbjct: 79 MAYETRTQFPTERIWITNEIIHNPSVNAKLKEMEVQFVPVNDSGVKDFSGVGQGDVVILP 138
Query: 63 AFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATAS 122
AFGA+V+E L++ +IVDTTCPWVSKVW VEKHKK D+TSI+HGKY+HEET+AT+S
Sbjct: 139 AFGASVQETQLLDSLGSKIVDTTCPWVSKVWNRVEKHKKADFTSIVHGKYNHEETIATSS 198
Query: 123 FAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIA 182
+A +Y++V NMKEAEYV +YIL G ++ FL KF KA+S GFDPD DL +VG+A
Sbjct: 199 YAKRYLVVLNMKEAEYVTNYILKG------GDRQEFLSKFSKAISAGFDPDRDLERVGVA 252
Query: 183 NQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVD 242
NQTTMLKGETE IGKL EKTMM+K+GVENVNEHF++FNTICDATQERQDAM+++VEE +D
Sbjct: 253 NQTTMLKGETEAIGKLFEKTMMQKYGVENVNEHFLAFNTICDATQERQDAMFEIVEEDLD 312
Query: 243 LILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPK 302
L++V+GG+NSSNT+HLQEIA +R +PSY ID RI I +K + + + NWLP
Sbjct: 313 LMIVIGGYNSSNTTHLQEIAIERNLPSYHIDDVHRILSAEAIEHKPLGKAIEQAVNWLPT 372
Query: 303 GQITIGITSGASTPDKAVEDVLKKVFEIK 331
G+I+IG+TSGASTPD+ VEDV+ ++F +K
Sbjct: 373 GKISIGVTSGASTPDRVVEDVINRIFTLK 401
>gi|427418924|ref|ZP_18909107.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Leptolyngbya sp. PCC 7375]
gi|425761637|gb|EKV02490.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Leptolyngbya sp. PCC 7375]
Length = 418
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 208/334 (62%), Positives = 266/334 (79%), Gaps = 10/334 (2%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYEAR+ FP ++IWITNEIIHNP VN+RL+EM VQ I V +G K F V +GDVV+LPA
Sbjct: 76 MAYEARQHFPNQRIWITNEIIHNPGVNERLQEMNVQFIQVIDGTKDFSGVEQGDVVILPA 135
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V+EM LN ++ IVDTTCPWVSKVWTSVEKHKK +TSIIHGKY HEETVAT SF
Sbjct: 136 FGASVDEMKLLNERDCTIVDTTCPWVSKVWTSVEKHKKQAFTSIIHGKYQHEETVATKSF 195
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEA------FLEKFKKAVSKGFDPDVDLV 177
A Y++V N+ EA+YV +YIL NG +S +E FL+KF A S+GFDPD DL
Sbjct: 196 ANTYLVVLNLDEAQYVANYIL----NGGNSPEERLRKRTEFLDKFANAYSQGFDPDQDLD 251
Query: 178 KVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMV 237
VG+ANQTTMLKGETE+IGKL+E+TM++K+G + +NEHF SFNTICDATQERQDAM+++V
Sbjct: 252 AVGVANQTTMLKGETEQIGKLLERTMLKKYGPQAINEHFSSFNTICDATQERQDAMFELV 311
Query: 238 EEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKE 297
+ +DL++V+GG+NSSNT+HLQEIA +R IPSY ID +R+GPGN+I ++ +H +
Sbjct: 312 DMDMDLMVVIGGFNSSNTTHLQEIAIERDIPSYHIDGPQRLGPGNQIEHQPLHKTPTVSK 371
Query: 298 NWLPKGQITIGITSGASTPDKAVEDVLKKVFEIK 331
WLP G+I IGITSGASTPDK+V V++++F++K
Sbjct: 372 EWLPTGKIVIGITSGASTPDKSVAQVIQRIFQLK 405
>gi|209524760|ref|ZP_03273307.1| hydroxymethylbutenyl pyrophosphate reductase [Arthrospira maxima
CS-328]
gi|423067765|ref|ZP_17056555.1| hydroxymethylbutenyl pyrophosphate reductase [Arthrospira platensis
C1]
gi|209494904|gb|EDZ95212.1| hydroxymethylbutenyl pyrophosphate reductase [Arthrospira maxima
CS-328]
gi|406710731|gb|EKD05935.1| hydroxymethylbutenyl pyrophosphate reductase [Arthrospira platensis
C1]
Length = 402
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 207/328 (63%), Positives = 257/328 (78%), Gaps = 6/328 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ FP E+IWITNEIIHNP+VN+ L +M V+ IPV + K F VV GDVV+LPA
Sbjct: 75 MAYETRQHFPTERIWITNEIIHNPSVNQHLRDMNVEFIPVNDSHKDFSVVGSGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V+EM LN+K +I+DTTCPWVSKVW +VEKHKK YTSIIHGKY HEETVAT+SF
Sbjct: 135 FGASVQEMQILNDKGCKIIDTTCPWVSKVWNTVEKHKKKQYTSIIHGKYKHEETVATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
A KY+++ N++EAEYV DYIL G +E FL KF A S FDPD DL VGIAN
Sbjct: 195 ADKYLVLLNLEEAEYVADYILNG------GNREEFLAKFANAYSANFDPDRDLESVGIAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETE+IGKL E+TMM+K+G N+NEHF SFNTICDATQERQDAM ++EEK+DL
Sbjct: 249 QTTMLKSETEQIGKLFERTMMQKYGPANLNEHFQSFNTICDATQERQDAMIGLLEEKLDL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQE+A +RGIPSY IDS RI GN I +K ++ +L WLP+G
Sbjct: 309 MVVIGGFNSSNTTHLQEMAIERGIPSYHIDSSDRILEGNTIQHKPLNKDLEMATKWLPEG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIK 331
+I +G+TSGASTPD+ VE+ ++K+F K
Sbjct: 369 EIIVGVTSGASTPDRVVEEAIQKIFAQK 396
>gi|170077142|ref|YP_001733780.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. PCC 7002]
gi|238692815|sp|B1XPG7.1|ISPH_SYNP2 RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|169884811|gb|ACA98524.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. PCC 7002]
Length = 403
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 209/332 (62%), Positives = 261/332 (78%), Gaps = 6/332 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE RK FP EKIW+TNEIIHNP+VN RL+EM V I V +G K F V GDVV+LPA
Sbjct: 75 MAYETRKHFPTEKIWVTNEIIHNPSVNNRLKEMNVHFIEVVDGDKDFSGVANGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA V+EM LN++ IVDTTCPWVSKVW SVEKHKK +YTSIIHGKY HEETVAT+SF
Sbjct: 135 FGATVQEMQLLNDRGCTIVDTTCPWVSKVWNSVEKHKKKNYTSIIHGKYKHEETVATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG Y+++ N++EAEYV +YIL G ++ FL+KFK A S+GFDPD DL +VG+AN
Sbjct: 195 AGTYLVLLNLEEAEYVRNYILHG------GDRQTFLDKFKNAYSEGFDPDKDLDRVGVAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETE++GKL E+TM+ KFG +N+HF+SFNTICDATQERQDAM+ +VE+ +DL
Sbjct: 249 QTTMLKSETEQMGKLFEQTMLEKFGPTEINDHFMSFNTICDATQERQDAMFDLVEKDLDL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQEIA +R IPSY IDS R+ N IA+K + GE+ + +WLP G
Sbjct: 309 MVVIGGFNSSNTTHLQEIAVERNIPSYHIDSGDRLLGNNVIAHKPLDGEITTQTHWLPAG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEA 335
++ IG+TSGASTPDK VEDV+ K+F K + A
Sbjct: 369 KLKIGVTSGASTPDKVVEDVIAKIFAEKAQPA 400
>gi|409992818|ref|ZP_11275987.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Arthrospira
platensis str. Paraca]
gi|291568478|dbj|BAI90750.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Arthrospira
platensis NIES-39]
gi|409936318|gb|EKN77813.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Arthrospira
platensis str. Paraca]
Length = 402
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 207/328 (63%), Positives = 257/328 (78%), Gaps = 6/328 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ FP E+IWITNEIIHNP+VN+ L +M V+ IPV + K F VV GDVV+LPA
Sbjct: 75 MAYETRQHFPTERIWITNEIIHNPSVNQHLRDMNVEFIPVNDSDKDFSVVGSGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V+EM LN+K +I+DTTCPWVSKVW +VEKHKK YTSIIHGKY HEETVAT+SF
Sbjct: 135 FGASVQEMQILNDKGCKIIDTTCPWVSKVWNTVEKHKKKQYTSIIHGKYKHEETVATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
A KY+++ N+ EAEYV DYIL G +E FL +F A S FDPD DL VGIAN
Sbjct: 195 ADKYLVLLNLAEAEYVADYILTG------GNREEFLARFANAYSANFDPDRDLESVGIAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETE+IGKL E+TMM+K+G N+NEHF SFNTICDATQERQDAM ++EEK+DL
Sbjct: 249 QTTMLKSETEQIGKLFERTMMQKYGPANLNEHFQSFNTICDATQERQDAMIGLLEEKLDL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQE+A +RGIPSY IDS RI GNKI +K ++ +L WLP+G
Sbjct: 309 MVVIGGFNSSNTTHLQEMAIERGIPSYHIDSSDRILEGNKIEHKPLNKDLEISAQWLPEG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIK 331
+I +G+TSGASTPD+ VE+ ++K+F K
Sbjct: 369 EIIVGVTSGASTPDRVVEEAIQKIFAHK 396
>gi|428218816|ref|YP_007103281.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudanabaena
sp. PCC 7367]
gi|427990598|gb|AFY70853.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudanabaena
sp. PCC 7367]
Length = 414
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 205/329 (62%), Positives = 259/329 (78%), Gaps = 7/329 (2%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV-EEGKKQFDVVNKGDVVVLP 62
+AYE R QFP E+IWITNEIIHNP+VN RL+EMAV IPV E+G K F + +GDVV+LP
Sbjct: 87 MAYETRSQFPTERIWITNEIIHNPSVNARLKEMAVLFIPVDEQGNKDFTGIQQGDVVILP 146
Query: 63 AFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATAS 122
AFGA+V+E+ L IVDTTCPWVSKVW VEKHKK D+TSIIHGKY HEET+AT+S
Sbjct: 147 AFGASVQEIQYLEQVGCTIVDTTCPWVSKVWNRVEKHKKSDFTSIIHGKYKHEETIATSS 206
Query: 123 FAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIA 182
+A +Y++V NM EAEYV DYIL G ++ FL KF +A S GFDPD DL +GIA
Sbjct: 207 YAKRYLVVLNMAEAEYVADYILNG------GDRQEFLAKFSQATSAGFDPDRDLQHIGIA 260
Query: 183 NQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVD 242
NQTTMLKGETE+IGKL E+TMM+K+GV+N+N+HF+++NTICDATQERQDAM+++VEE +D
Sbjct: 261 NQTTMLKGETEDIGKLFERTMMQKYGVDNLNQHFLAYNTICDATQERQDAMFEIVEEALD 320
Query: 243 LILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPK 302
L++VVGG+NSSNT+HLQEIA +R +PSY IDS +RI I +K + E+++ WLP
Sbjct: 321 LMVVVGGYNSSNTTHLQEIAIERDLPSYHIDSAERILSAQTIEHKPLGKEIIQTHEWLPA 380
Query: 303 GQITIGITSGASTPDKAVEDVLKKVFEIK 331
G+I +GITSGASTPDK V D ++++F K
Sbjct: 381 GKIRVGITSGASTPDKVVSDAIERIFAFK 409
>gi|119486460|ref|ZP_01620518.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Lyngbya sp. PCC
8106]
gi|119456362|gb|EAW37493.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Lyngbya sp. PCC
8106]
Length = 402
Score = 439 bits (1130), Expect = e-121, Method: Compositional matrix adjust.
Identities = 209/328 (63%), Positives = 263/328 (80%), Gaps = 6/328 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ FP E+IWITNEIIHNP+VN+ L +M V+ IPV +G+K F + GDVV+LPA
Sbjct: 75 MAYETRQHFPTERIWITNEIIHNPSVNQHLLDMKVEFIPVIDGEKDFSGIGIGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V+EM LN+K +IVDTTCPWVSKVW +VEKHKK YTSIIHGKY HEETVAT+SF
Sbjct: 135 FGASVQEMQILNDKGCKIVDTTCPWVSKVWNTVEKHKKKSYTSIIHGKYKHEETVATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
A KY++V N+ +AEYVC+YIL G ++ F KFK A S+GFDPD DL VGIAN
Sbjct: 195 ADKYLVVLNLAQAEYVCNYILNG------GNRQEFFAKFKHAHSEGFDPDKDLECVGIAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETE+IGKL E+T+M+K+G + + EHF SFNTICDATQERQDAM +VEEK+DL
Sbjct: 249 QTTMLKSETEQIGKLFERTVMQKYGPDQLTEHFQSFNTICDATQERQDAMLGLVEEKLDL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQE++ +RGI SY IDS +RI G+ I +K + ++ ENWLP+G
Sbjct: 309 MIVIGGFNSSNTTHLQEMSIERGISSYHIDSPERIISGDCIEHKPLEKDIEIAENWLPEG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIK 331
+I +GITSGASTPDKAVEDV+ K+FE+K
Sbjct: 369 KIVVGITSGASTPDKAVEDVIDKIFELK 396
>gi|8928192|sp|Q55643.2|ISPH_SYNY3 RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|1256595|gb|AAB72119.1| LytB [Synechocystis sp. PCC 6803]
gi|407961260|dbj|BAM54500.1| 4-hydroxy-3-methylbut-2-enyl diphosphatereductase [Bacillus
subtilis BEST7613]
Length = 379
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 208/333 (62%), Positives = 261/333 (78%), Gaps = 6/333 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ FP +++WITNEIIHNP+VN+RL EM V I V G+K F V KGDVV+LPA
Sbjct: 48 MAYETRQHFPGDRLWITNEIIHNPSVNQRLREMEVNFIDVVNGEKDFSGVAKGDVVILPA 107
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+VEEM LN++ IVDTTCPWVSKVW SVEKHKK ++TSIIHGKY+HEET+AT+SF
Sbjct: 108 FGASVEEMQLLNDRECTIVDTTCPWVSKVWNSVEKHKKKEHTSIIHGKYNHEETIATSSF 167
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG Y+IV NM EA+ VCDYIL G ++ FL+ F A S GFDPD DLV++G+AN
Sbjct: 168 AGTYLIVLNMAEAQKVCDYILHG------GDRQEFLDYFANAHSAGFDPDQDLVRLGVAN 221
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETE IGKL EKT+++K+G +N HF+SFNTICDATQERQDAM+ +VEE + L
Sbjct: 222 QTTMLKSETEMIGKLFEKTLLQKYGPIELNNHFMSFNTICDATQERQDAMFDLVEEDLSL 281
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQEIA + GIPS IDS RIGPGN++ +K + +L E WLP G
Sbjct: 282 MVVIGGFNSSNTTHLQEIAVEHGIPSVHIDSGDRIGPGNRVEHKPLGKDLEVLEPWLPAG 341
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEAL 336
+IT+G+TSGASTPDK VE+V+KK+ IK + +
Sbjct: 342 KITVGVTSGASTPDKVVEEVMKKILAIKEAQPV 374
>gi|16331361|ref|NP_442089.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechocystis
sp. PCC 6803]
gi|383323102|ref|YP_005383955.1| hypothetical protein SYNGTI_2193 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383326271|ref|YP_005387124.1| hypothetical protein SYNPCCP_2192 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383492155|ref|YP_005409831.1| hypothetical protein SYNPCCN_2192 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384437423|ref|YP_005652147.1| hypothetical protein SYNGTS_2194 [Synechocystis sp. PCC 6803]
gi|451815514|ref|YP_007451966.1| hypothetical protein MYO_122140 [Synechocystis sp. PCC 6803]
gi|1001532|dbj|BAA10159.1| slr0348 [Synechocystis sp. PCC 6803]
gi|339274455|dbj|BAK50942.1| hypothetical protein SYNGTS_2194 [Synechocystis sp. PCC 6803]
gi|359272421|dbj|BAL29940.1| hypothetical protein SYNGTI_2193 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359275591|dbj|BAL33109.1| hypothetical protein SYNPCCN_2192 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359278761|dbj|BAL36278.1| hypothetical protein SYNPCCP_2192 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|451781483|gb|AGF52452.1| hypothetical protein MYO_122140 [Synechocystis sp. PCC 6803]
Length = 406
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 208/333 (62%), Positives = 261/333 (78%), Gaps = 6/333 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ FP +++WITNEIIHNP+VN+RL EM V I V G+K F V KGDVV+LPA
Sbjct: 75 MAYETRQHFPGDRLWITNEIIHNPSVNQRLREMEVNFIDVVNGEKDFSGVAKGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+VEEM LN++ IVDTTCPWVSKVW SVEKHKK ++TSIIHGKY+HEET+AT+SF
Sbjct: 135 FGASVEEMQLLNDRECTIVDTTCPWVSKVWNSVEKHKKKEHTSIIHGKYNHEETIATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG Y+IV NM EA+ VCDYIL G ++ FL+ F A S GFDPD DLV++G+AN
Sbjct: 195 AGTYLIVLNMAEAQKVCDYILHG------GDRQEFLDYFANAHSAGFDPDQDLVRLGVAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETE IGKL EKT+++K+G +N HF+SFNTICDATQERQDAM+ +VEE + L
Sbjct: 249 QTTMLKSETEMIGKLFEKTLLQKYGPIELNNHFMSFNTICDATQERQDAMFDLVEEDLSL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQEIA + GIPS IDS RIGPGN++ +K + +L E WLP G
Sbjct: 309 MVVIGGFNSSNTTHLQEIAVEHGIPSVHIDSGDRIGPGNRVEHKPLGKDLEVLEPWLPAG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEAL 336
+IT+G+TSGASTPDK VE+V+KK+ IK + +
Sbjct: 369 KITVGVTSGASTPDKVVEEVMKKILAIKEAQPV 401
>gi|254423787|ref|ZP_05037505.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. PCC 7335]
gi|196191276|gb|EDX86240.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. PCC 7335]
Length = 406
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 207/329 (62%), Positives = 261/329 (79%), Gaps = 7/329 (2%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYEAR FPE+++WITNEIIHNP VN++L+ M V I V+ G K F V +GDVV+LPA
Sbjct: 76 MAYEARAHFPEQRLWITNEIIHNPEVNQQLKAMDVHFIEVKTGTKDFSGVGRGDVVILPA 135
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V+EM L++K IVDTTCPWVSKVW +VEKHKK +TSIIHGKY HEETVAT SF
Sbjct: 136 FGASVQEMKLLHDKGCTIVDTTCPWVSKVWNTVEKHKKKAFTSIIHGKYKHEETVATTSF 195
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG Y++V N+ EAEYV +YIL G +E FL KF A S+GFDPD DL VGIAN
Sbjct: 196 AGTYLVVLNLAEAEYVANYILEG------GDREDFLTKFTNAHSEGFDPDRDLDAVGIAN 249
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLKGETE+IGKL E+TM++K+G N HF SFNTICDATQERQDAM+ +VE +DL
Sbjct: 250 QTTMLKGETEQIGKLFERTMLKKYGPVEFNHHFHSFNTICDATQERQDAMFSLVEADIDL 309
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG-ELVEKENWLPK 302
++V+GG+NSSNT+HLQEIA +R +PS+ IDS +R+GPGN+I +K +H EL + +WLP
Sbjct: 310 MVVIGGFNSSNTTHLQEIAVERSLPSFHIDSAERVGPGNRIEHKPLHSDELSVELDWLPA 369
Query: 303 GQITIGITSGASTPDKAVEDVLKKVFEIK 331
G+I++G+TSGASTPDKAV++V++K+F IK
Sbjct: 370 GKISVGVTSGASTPDKAVQEVIEKIFAIK 398
>gi|194476978|ref|YP_002049157.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Paulinella
chromatophora]
gi|171191985|gb|ACB42947.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Paulinella
chromatophora]
Length = 402
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 202/328 (61%), Positives = 260/328 (79%), Gaps = 4/328 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ +P E+IWITNEIIHNP+VN L EM V IPV+EG K F V GDVV+LPA
Sbjct: 75 MAYETRRHYPTERIWITNEIIHNPSVNDHLHEMNVLFIPVKEGVKDFSEVASGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA V+EM LN + IVDTTCPWVSKVW +VEKHKK ++TSIIHGK HEET+AT+SF
Sbjct: 135 FGATVQEMQLLNERGCHIVDTTCPWVSKVWNTVEKHKKHEFTSIIHGKVKHEETLATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYIL-GGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIA 182
A Y++V +++EA VCDYIL GEL G+ EAF+ +F KA S GFDPD DL++VG+A
Sbjct: 195 ADTYLVVLDLEEARLVCDYILDSGELKGN---HEAFMLRFAKACSPGFDPDHDLLRVGVA 251
Query: 183 NQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVD 242
NQTTMLK ETEEIG+L E+TM+++FG +NEHF+SFNTICDATQERQDAM+ +VEE +D
Sbjct: 252 NQTTMLKRETEEIGRLFEQTMLQRFGPAALNEHFLSFNTICDATQERQDAMFALVEEPLD 311
Query: 243 LILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPK 302
L++V+GG+NSSNT+HLQEIA RG+ ++ ID+ +RIGPGN+I +K + EL ++N+LP
Sbjct: 312 LLVVIGGYNSSNTTHLQEIAVSRGLRAFHIDTPERIGPGNRITHKPLGEELTVEDNFLPD 371
Query: 303 GQITIGITSGASTPDKAVEDVLKKVFEI 330
G + +GITSGASTPD+ VEDV+ ++ +
Sbjct: 372 GLLRVGITSGASTPDRVVEDVIHRLIAL 399
>gi|307108197|gb|EFN56438.1| hypothetical protein CHLNCDRAFT_59658 [Chlorella variabilis]
Length = 505
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 208/335 (62%), Positives = 268/335 (80%), Gaps = 13/335 (3%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIP-VEEGKKQFDVVNKGDVVVLP 62
+AYEAR+ +P +++ ITNEIIHNP+VN+RL+EM VQ I +G K F V +G+VV+LP
Sbjct: 154 MAYEARRAYPGQRLHITNEIIHNPSVNQRLKEMDVQFIDEGADGGKDFSGVKEGEVVILP 213
Query: 63 AFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATAS 122
AFGA+V+EM LN++NVQIVDTTCPWVSKVW +V+ + +TSIIHGK++HEET+ATAS
Sbjct: 214 AFGASVQEMRLLNDRNVQIVDTTCPWVSKVWNAVDNQARKGHTSIIHGKWAHEETIATAS 273
Query: 123 FAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIA 182
FAG Y+IVK++KEA+YVCDYI+ G + FL KF+ A+S GFDP+ DL ++G+A
Sbjct: 274 FAGTYLIVKDLKEAQYVCDYIMHG------GDRAEFLAKFENAMSAGFDPEQDLQRIGMA 327
Query: 183 NQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMV----- 237
NQTTMLKGETE IGKL+EKT ++K+G +++ F+ +TICDATQERQDA+YK+V
Sbjct: 328 NQTTMLKGETEAIGKLLEKTQLQKYGPGELSQRFMIMDTICDATQERQDAVYKLVGQQST 387
Query: 238 EEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPG-NKIAYKLMHGELVEK 296
E +D++LVVGG+NSSNTSHLQEI E +GIPS+W+DS RI G NK+ +KL HGELVE
Sbjct: 388 PEGIDMMLVVGGFNSSNTSHLQEIGEMKGIPSFWVDSAARIDVGANKVTHKLAHGELVET 447
Query: 297 ENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIK 331
ENWLP+G IT+G+TSGASTPDKAVEDVL +VF IK
Sbjct: 448 ENWLPEGPITLGVTSGASTPDKAVEDVLDRVFRIK 482
>gi|148243418|ref|YP_001228575.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. RCC307]
gi|166218350|sp|A5GWG3.1|ISPH_SYNR3 RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|147851728|emb|CAK29222.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. RCC307]
Length = 406
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 202/336 (60%), Positives = 264/336 (78%), Gaps = 8/336 (2%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYE R+ +P E+IWITNEIIHNP+VN L EM V IPVEEG K F V GDVV+LPA
Sbjct: 75 IAYETRRHYPTERIWITNEIIHNPSVNAHLVEMNVLFIPVEEGVKDFSGVESGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA V+EM LN + IVDTTCPWVSKVW SVE+HKK +TS+IHGK HEET+AT+SF
Sbjct: 135 FGATVQEMQLLNERGCHIVDTTCPWVSKVWNSVERHKKNSFTSVIHGKVKHEETLATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG Y++V +++EA+ VCDYILG NG+ +EAFL++F A S GFDPD DL ++G+AN
Sbjct: 195 AGTYLVVLDLEEAQLVCDYILG---NGN---REAFLKRFAGATSPGFDPDRDLSRIGVAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETE+IG+L E+T++R++G ++N+HF++FNTICDATQERQDAM+ +V+E +DL
Sbjct: 249 QTTMLKSETEDIGRLFERTLLRRYGPTDLNDHFLAFNTICDATQERQDAMFSLVDEPLDL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQEIA RGIPS ID+ +RIGPGN + +K + +L E +LP+G
Sbjct: 309 MVVIGGYNSSNTTHLQEIAVSRGIPSVHIDAPERIGPGNAVEHKPLGQDLERLEPFLPEG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 339
+ IGITSGASTPD+ VE V+ ++ ++ EA Q+A
Sbjct: 369 DLRIGITSGASTPDRVVEGVIDRLLQLA--EAGQIA 402
>gi|254430488|ref|ZP_05044191.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Cyanobium sp.
PCC 7001]
gi|197624941|gb|EDY37500.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Cyanobium sp.
PCC 7001]
Length = 408
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 200/331 (60%), Positives = 263/331 (79%), Gaps = 4/331 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ +P E+IWITNEIIHNP+VN L +M VQ IPV+EG K F V GDVV+LPA
Sbjct: 75 MAYETRRHYPSERIWITNEIIHNPSVNDHLRDMDVQFIPVDEGVKDFSDVASGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA V+EM LN + IVDTTCPWVSKVW +VEKHKK +TSIIHGK HEET+AT+SF
Sbjct: 135 FGATVQEMQLLNERGCHIVDTTCPWVSKVWNTVEKHKKHAFTSIIHGKVKHEETLATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGG----ELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKV 179
AG Y++V ++ EA+ VCDY+L G + ++ +EAF+ +F KA S GFDPD DL++V
Sbjct: 195 AGTYLVVLDLAEAQLVCDYVLLGARDVDAATRTAAREAFMARFAKACSPGFDPDRDLIRV 254
Query: 180 GIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEE 239
G+ANQTTMLK ETEEIG+LVE+TM++++G +NEHF++FNTICDATQERQDAM+ +V+E
Sbjct: 255 GVANQTTMLKSETEEIGRLVERTMLQRYGPTELNEHFLAFNTICDATQERQDAMFSLVDE 314
Query: 240 KVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENW 299
+DL++V+GG+NSSNT+HLQEIA RGI S+ ID+ +RIGPGN+I +K + GEL +E +
Sbjct: 315 PLDLMVVIGGYNSSNTTHLQEIAVSRGIRSFHIDTPERIGPGNRIEHKPLGGELQLEEPF 374
Query: 300 LPKGQITIGITSGASTPDKAVEDVLKKVFEI 330
LP G I +GITSGASTPD+ VE V++++ ++
Sbjct: 375 LPAGPIRVGITSGASTPDRIVEAVIERLIDL 405
>gi|443328031|ref|ZP_21056635.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Xenococcus sp. PCC 7305]
gi|442792340|gb|ELS01823.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Xenococcus sp. PCC 7305]
Length = 398
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 209/329 (63%), Positives = 254/329 (77%), Gaps = 6/329 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ FP E IWITNEIIHNP+VN+RL+EM V IPV +G K F VV+ G+VV+LPA
Sbjct: 76 MAYETRQHFPTETIWITNEIIHNPSVNERLKEMNVGFIPVIDGVKDFSVVSSGEVVILPA 135
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V EM LN+K IVDTTCPWVSKVW SVEKHKK D TSIIHGKY HEETVAT+SF
Sbjct: 136 FGASVTEMQLLNDKGCTIVDTTCPWVSKVWNSVEKHKKRDCTSIIHGKYKHEETVATSSF 195
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG Y++V N+++A YV DYIL G K FL KF A S+GFDPD DL KVG+AN
Sbjct: 196 AGTYLVVLNLEQANYVADYILNG------GDKTEFLAKFVHAHSEGFDPDRDLEKVGVAN 249
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETE+IGKL E+TM++K+G +N HF+SFNTICDATQERQDAM +VEE + L
Sbjct: 250 QTTMLKSETEQIGKLFEQTMLKKYGPLELNNHFMSFNTICDATQERQDAMLDLVEEDLSL 309
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
+LV+GG+NSSNT+HLQEIA + SY IDS RI P N I +K + ++ +ENWLP G
Sbjct: 310 MLVIGGFNSSNTTHLQEIAIAKNFTSYHIDSSDRIKPDNTIEHKPLEKDIEVQENWLPSG 369
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKR 332
+IT+G+TSGASTPDK V D ++K+F +KR
Sbjct: 370 KITVGVTSGASTPDKVVADAIEKIFALKR 398
>gi|218247399|ref|YP_002372770.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Cyanothece sp.
PCC 8801]
gi|257061267|ref|YP_003139155.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Cyanothece sp.
PCC 8802]
gi|226722803|sp|B7K4V8.1|ISPH_CYAP8 RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|218167877|gb|ACK66614.1| hydroxymethylbutenyl pyrophosphate reductase [Cyanothece sp. PCC
8801]
gi|256591433|gb|ACV02320.1| hydroxymethylbutenyl pyrophosphate reductase [Cyanothece sp. PCC
8802]
Length = 403
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 209/331 (63%), Positives = 258/331 (77%), Gaps = 6/331 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ FP+E IWITNE+IH+P+VN+RLE+M ++ I V G+K F + GDVV+LPA
Sbjct: 75 MAYETRQHFPKESIWITNELIHHPSVNQRLEQMEIKFIEVINGQKDFSQIKSGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V EM LN++ IVDTTCPWVSKVW SVEKHKK YTSIIHGKY HEETVAT+SF
Sbjct: 135 FGASVSEMQLLNDRGCTIVDTTCPWVSKVWNSVEKHKKRHYTSIIHGKYRHEETVATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG Y++V N+++A YVCDYIL G KE FL KFK A S+GFDPD DL KVGIAN
Sbjct: 195 AGTYLVVLNLEQATYVCDYILKG------GNKEEFLAKFKNAYSEGFDPDTDLEKVGIAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETE+IGKL E TM++K+G +N+HF+SFNTICDATQERQDAM ++V+EK+DL
Sbjct: 249 QTTMLKSETEQIGKLFEGTMLKKYGPAVINDHFMSFNTICDATQERQDAMLELVKEKLDL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQEI +GI SY ID+ RI P N I +K + +L KENWLP+G
Sbjct: 309 MVVIGGFNSSNTTHLQEIPIYQGITSYHIDNATRIKPNNCIEHKPLGKDLEIKENWLPEG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREE 334
I +GITSGASTPD VE V++K+F K E
Sbjct: 369 SIVVGITSGASTPDIIVEAVIEKIFSAKELE 399
>gi|284929156|ref|YP_003421678.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[cyanobacterium UCYN-A]
gi|284809615|gb|ADB95320.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[cyanobacterium UCYN-A]
Length = 400
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 205/329 (62%), Positives = 261/329 (79%), Gaps = 6/329 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ F +++IWITNEIIHNP+VN+RL EM V I + K F VV +GDVV+LPA
Sbjct: 75 MAYETRQHFADKQIWITNEIIHNPSVNQRLLEMNVGFIKIVGENKDFSVVKQGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V EM LN+ I+DTTCPWVSKVW SVEKHKK D+TSIIHGKY HEETVAT+SF
Sbjct: 135 FGASVTEMQFLNSIGCTIIDTTCPWVSKVWNSVEKHKKRDHTSIIHGKYKHEETVATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG Y++V N++EA YVCDY+L G K+ FLEKF+ A S+ FDPD DL+K+GIAN
Sbjct: 195 AGTYLVVLNLEEAAYVCDYMLNG------GNKKLFLEKFQNACSEDFDPDKDLIKLGIAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETE+IGK+ E T+++K+G +N+HF+SFNTICDATQERQDAM +VEE + L
Sbjct: 249 QTTMLKSETEQIGKMFEMTILKKYGPIELNKHFMSFNTICDATQERQDAMLNLVEENISL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQEIA ++GIPSY IDSEKRI GN+I +K + +LV ++NWLP
Sbjct: 309 MVVIGGFNSSNTTHLQEIAIEKGIPSYHIDSEKRILLGNRIEHKPLTQDLVVQDNWLPNT 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKR 332
+ IG+TSGASTPDK VE V+K++F+ K+
Sbjct: 369 PLVIGVTSGASTPDKVVEAVVKRIFQAKK 397
>gi|317968619|ref|ZP_07970009.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. CB0205]
Length = 406
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 199/329 (60%), Positives = 254/329 (77%), Gaps = 2/329 (0%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE RK +P E+IWITNEIIHNP+VN L EM V I VE G K F V GDVV+LPA
Sbjct: 75 MAYETRKHYPTERIWITNEIIHNPSVNDHLREMDVLFIDVENGVKDFSKVASGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA V+EM LN + IVDTTCPWVSKVW +VEKHKK D TSIIHGK HEET+AT+SF
Sbjct: 135 FGATVQEMQLLNERGCHIVDTTCPWVSKVWNTVEKHKKHDITSIIHGKVKHEETLATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILG--GELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGI 181
AG Y++V ++ EA+ VCDYIL G + S+ ++AF+E+F A S GFDPD DL +VG+
Sbjct: 195 AGTYLVVLDLAEAQLVCDYILASSGGASPSAEQRQAFMERFSNACSPGFDPDRDLARVGV 254
Query: 182 ANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKV 241
ANQTTMLK ETEEIG+L E+TM+++FG +N+HF++FNTICDATQERQDAM+ +V+E +
Sbjct: 255 ANQTTMLKSETEEIGRLFERTMLKRFGPAELNDHFLAFNTICDATQERQDAMFALVDEPL 314
Query: 242 DLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLP 301
DL++V+GG+NSSNT+HLQEIA RGI S+ ID+ +RIGP N+I +K + EL E +LP
Sbjct: 315 DLMVVIGGYNSSNTTHLQEIAITRGIRSFHIDTPERIGPSNRIEHKPLGTELEVVEPFLP 374
Query: 302 KGQITIGITSGASTPDKAVEDVLKKVFEI 330
G + +GITSGASTPD+ VEDV+ ++ +
Sbjct: 375 SGPLRVGITSGASTPDRVVEDVISRLMAL 403
>gi|452824046|gb|EME31052.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Galdieria
sulphuraria]
Length = 485
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 204/330 (61%), Positives = 259/330 (78%), Gaps = 7/330 (2%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+A E RK FP++KIWITNEIIHNP VN RL E+ VQ +P ++ + F V+ DVV+LPA
Sbjct: 157 MALETRKHFPKQKIWITNEIIHNPKVNARLAELNVQFVPHKDFVRDFSAVSSEDVVILPA 216
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA + EM L+N QIVDTTCPWVSKVW SV+KHK+ + TS+IHGK++HEET+ATASF
Sbjct: 217 FGATLSEMEYLSNLGCQIVDTTCPWVSKVWNSVDKHKRANCTSVIHGKWNHEETIATASF 276
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
+ KYIIV N+++A+YVC YIL G K F+ KFK A+S GFDPD DL VGIAN
Sbjct: 277 SEKYIIVLNIEQAQYVCKYILYG------GDKNEFISKFKYAISSGFDPDTDLEAVGIAN 330
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ET I KL E+TM++KFG + +++HFI+FNTICDATQERQDAM ++E+ +DL
Sbjct: 331 QTTMLKNETNAIAKLFEETMLKKFGPQELSKHFIAFNTICDATQERQDAMLHLIEQPLDL 390
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG-ELVEKENWLPK 302
+LVVGG+NSSNTSHLQEIAE +GIPSY+ID +RIGP N+I ++ EL+EKEN+L +
Sbjct: 391 VLVVGGFNSSNTSHLQEIAERKGIPSYYIDGPERIGPQNRIVFRSSSSQELIEKENFLKQ 450
Query: 303 GQITIGITSGASTPDKAVEDVLKKVFEIKR 332
G +T+G+TSGASTPDK VEDVL++VF I +
Sbjct: 451 GPVTVGVTSGASTPDKIVEDVLERVFMIHK 480
>gi|87125110|ref|ZP_01080957.1| hydroxymethylbutenyl pyrophosphate reductase [Synechococcus sp.
RS9917]
gi|86167430|gb|EAQ68690.1| hydroxymethylbutenyl pyrophosphate reductase [Synechococcus sp.
RS9917]
Length = 398
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 195/328 (59%), Positives = 256/328 (78%), Gaps = 6/328 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ +P E++WITNEIIHNP+VN L EM V+ IPV++G K F V GDVV+LPA
Sbjct: 75 MAYETRRHYPSERLWITNEIIHNPSVNDHLREMDVRFIPVDQGVKDFSDVASGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA V+EM LN + IVDTTCPWVSKVWT+VEKHKK +TSIIHGK HEET+AT+SF
Sbjct: 135 FGATVQEMQLLNERGCHIVDTTCPWVSKVWTTVEKHKKHAFTSIIHGKVKHEETLATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG Y++V +++EA V DYILG +EAF+ +F +A S GFDPD DL ++G+AN
Sbjct: 195 AGTYLVVLDLEEARLVSDYILG------QGDREAFMARFARACSPGFDPDRDLERLGVAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETEEIG+L E+TM+ K+G +NEHF++FNTICDATQERQDAM+ +V+E +DL
Sbjct: 249 QTTMLKSETEEIGRLFERTMLSKYGPTRLNEHFLAFNTICDATQERQDAMFSLVDEPLDL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQEIA RGI S+ ID+ +RI P N I +K + G+LV + ++LP G
Sbjct: 309 MVVIGGYNSSNTTHLQEIAISRGIRSFHIDTPERIDPDNSIEHKPLGGDLVHETDFLPPG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIK 331
+T+GITSGASTPD+AVE V++++ +
Sbjct: 369 PVTVGITSGASTPDRAVEQVIQRLIALS 396
>gi|126742448|gb|ABO27197.1| plastid 4-hydroxy-3-methylbut-2-enyl disphosphate reductase
[Mesostigma viride]
Length = 314
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 204/310 (65%), Positives = 253/310 (81%), Gaps = 2/310 (0%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV-EEGKKQFDVVNKGDVVVLP 62
+AYE RK FP +KIWITNEIIHNPTVN+ L +M + IPV ++G+K F VV +VVVLP
Sbjct: 5 MAYETRKHFPTQKIWITNEIIHNPTVNQTLRDMEIGFIPVRDDGEKDFSVVANDNVVVLP 64
Query: 63 AFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATAS 122
AFGA+V+EM L+NK V IVDTTCPWVSKVW +VEKHKK +YTSIIHGKY+HEETVATAS
Sbjct: 65 AFGASVQEMQLLSNKGVNIVDTTCPWVSKVWNTVEKHKKTEYTSIIHGKYAHEETVATAS 124
Query: 123 FAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIA 182
FAG Y+I+K+MKEAEY CDY+LGG+LNG S +KE FL+KF KA+S+GFDPD L VG+A
Sbjct: 125 FAGTYLIIKDMKEAEYACDYLLGGKLNGKSGSKEDFLKKFSKAISRGFDPDKHLDFVGMA 184
Query: 183 NQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVD 242
NQTTMLKG+TE IGKL E ++M KFG ++ EHF++FNTICDATQERQDAM+++VE+ +D
Sbjct: 185 NQTTMLKGDTEMIGKLFETSLMSKFGPQSAAEHFMAFNTICDATQERQDAMFELVEKPLD 244
Query: 243 LILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIG-PGNKIAYKLMHGELVEKENWLP 301
++LVVGG+NSSNTSHLQEIAE+R S+W+DS RI N+I + L +GELV + WL
Sbjct: 245 MMLVVGGYNSSNTSHLQEIAEERKHNSFWVDSADRIDVDKNEIQHLLHYGELVTTKGWLK 304
Query: 302 KGQITIGITS 311
G I +G+TS
Sbjct: 305 PGPIRVGVTS 314
>gi|318042747|ref|ZP_07974703.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. CB0101]
Length = 398
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 195/327 (59%), Positives = 255/327 (77%), Gaps = 6/327 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ +P E+IWITNEIIHNP+VN L EM V IPV+ G K F V GDVV+LPA
Sbjct: 75 MAYETRRHYPTERIWITNEIIHNPSVNDHLREMNVLFIPVDGGVKDFSNVASGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA V+EM LN + IVDTTCPWVSKVW +VEKHKK TSIIHGK HEET+AT+SF
Sbjct: 135 FGATVQEMQLLNERGCHIVDTTCPWVSKVWNTVEKHKKHAITSIIHGKVKHEETLATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG Y++V ++ EA+ VCDYILG +++F+ +F KA S GFDPD DL +VG+AN
Sbjct: 195 AGTYLVVLDLAEAQLVCDYILG------KGDRDSFMARFAKACSPGFDPDRDLSRVGVAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETEEIG++ E+TM+++FG +N+HF++FNTICDATQERQDAM+ +V+E +DL
Sbjct: 249 QTTMLKSETEEIGRMFERTMLQRFGPVELNDHFVAFNTICDATQERQDAMFALVDEPLDL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQEIA RGI S+ ID+ +RIGPGN+I +K + G+L E +LP+G
Sbjct: 309 MVVIGGYNSSNTTHLQEIAVSRGIRSFHIDTPERIGPGNRIEHKPLGGDLEVVEPFLPEG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEI 330
+ +GITSGASTPD+ VEDV+ ++ ++
Sbjct: 369 TLRVGITSGASTPDRVVEDVISRLIDL 395
>gi|88808029|ref|ZP_01123540.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. WH 7805]
gi|88788068|gb|EAR19224.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. WH 7805]
Length = 399
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 196/330 (59%), Positives = 256/330 (77%), Gaps = 6/330 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE RK +P E++WITNEIIHNP+VN L EM VQ IPVE+G K F V GDVV+LPA
Sbjct: 75 MAYETRKHYPGERLWITNEIIHNPSVNDHLREMNVQFIPVEQGVKDFSGVTSGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA V+EM LN + IVDTTCPWVSKVW +VEKHKK +TSIIHGK HEET+AT+SF
Sbjct: 135 FGATVQEMQLLNERGCHIVDTTCPWVSKVWNTVEKHKKQTFTSIIHGKVKHEETLATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG Y++V +++EA+ V DYILG +++F+ +F KA S GFDPD DL ++G+AN
Sbjct: 195 AGTYLVVLDLEEAQIVADYILG------EGDRDSFMARFSKACSPGFDPDQDLKRLGVAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETEEIG+L E+TM+ KFG +NEHF++FNTICDATQERQDAM+ +V+E +DL
Sbjct: 249 QTTMLKRETEEIGRLFERTMLSKFGPTQLNEHFLAFNTICDATQERQDAMFSLVDEPLDL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQEIA +RGI S+ ID+ +RI N I +K + EL+ ++N+LP G
Sbjct: 309 MVVIGGYNSSNTTHLQEIAINRGIRSFHIDTPERISADNSIEHKPLGQELIREQNFLPGG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKRE 333
+T+GITSGASTPD+ VE V++++ + E
Sbjct: 369 TVTVGITSGASTPDRVVEHVIQQLISLSEE 398
>gi|148238632|ref|YP_001224019.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. WH 7803]
gi|166218349|sp|A5GIF7.1|ISPH_SYNPW RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|147847171|emb|CAK22722.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. WH 7803]
Length = 399
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 198/330 (60%), Positives = 256/330 (77%), Gaps = 6/330 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE RK +P E++WITNEIIHNP+VN L EM VQ IPVE+G K F V GDVV+LPA
Sbjct: 75 MAYETRKHYPSERLWITNEIIHNPSVNDHLREMNVQFIPVEQGVKDFSGVTSGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA V+EM LN + IVDTTCPWVSKVW +VEKHKK +TSIIHGK HEET+AT+SF
Sbjct: 135 FGATVQEMQLLNERGCHIVDTTCPWVSKVWNTVEKHKKQTFTSIIHGKVKHEETLATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG Y++V +++EA+ V DYILG NG +++F+ +F KA S GFDPD DL K+G+AN
Sbjct: 195 AGTYLVVLDLEEAQIVADYILG---NGD---RDSFMARFSKACSPGFDPDQDLEKLGVAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETEEIG+L E+TM+ KFG +NEHF++FNTICDATQERQDAM+ +V+E +DL
Sbjct: 249 QTTMLKRETEEIGRLFERTMLSKFGPTQLNEHFLAFNTICDATQERQDAMFSLVDEPLDL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQEIA +RGI S+ ID+ +RI N I +K + EL+ + +LP G
Sbjct: 309 MVVIGGYNSSNTTHLQEIAINRGIRSFHIDTPERISADNSIEHKPLGQELIRELEFLPSG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKRE 333
+T+GITSGASTPD+ VE V++++ + E
Sbjct: 369 TVTVGITSGASTPDRVVEHVIQRLISLSEE 398
>gi|87301960|ref|ZP_01084794.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. WH 5701]
gi|87283528|gb|EAQ75483.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. WH 5701]
Length = 398
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 194/327 (59%), Positives = 253/327 (77%), Gaps = 6/327 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ +P E+IWITNEIIHNP+VN L +M V I VEEG K F V GDVV+LPA
Sbjct: 75 MAYETRRHYPSERIWITNEIIHNPSVNAHLRDMNVLFIRVEEGVKDFSEVGVGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA V+EM LN + IVDTTCPWVSKVW +VEKHKK ++SIIHGK HEET+AT+SF
Sbjct: 135 FGATVQEMQLLNERGCHIVDTTCPWVSKVWNTVEKHKKHAFSSIIHGKVKHEETLATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG Y++V ++ EA+ VCDYILG +EAF+ F KA S GFDPD DL +VG+AN
Sbjct: 195 AGTYLVVLDLAEAQMVCDYILG------KGDREAFISHFAKASSPGFDPDRDLARVGVAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETEEIG++ E+TM++++G +N+HF++FNTICDATQERQDAM+ +V+E +DL
Sbjct: 249 QTTMLKSETEEIGRMFERTMLQRYGPAELNDHFLAFNTICDATQERQDAMFSLVDEPLDL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQEIA RGI S+ ID+ +RIGPGN+I + + G+L +LP+G
Sbjct: 309 MVVIGGYNSSNTTHLQEIAISRGIRSFHIDTPERIGPGNRIEHMPLGGDLEVLAPFLPEG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEI 330
+ +GITSGASTPD+ VEDV++ + E+
Sbjct: 369 PLRVGITSGASTPDRVVEDVIRHLMEL 395
>gi|427703322|ref|YP_007046544.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Cyanobium gracile PCC 6307]
gi|427346490|gb|AFY29203.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Cyanobium gracile PCC 6307]
Length = 402
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 194/330 (58%), Positives = 257/330 (77%), Gaps = 2/330 (0%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ +P E+IWITNEIIHNP+VN L +M V+ IPV++ K F V GDVV+LPA
Sbjct: 75 MAYETRRHYPSERIWITNEIIHNPSVNAHLRQMDVRFIPVDDDVKDFSEVGTGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA V+EM LN + IVDTTCPWVSKVW +VEKHKK +TSIIHGK HEET+AT+SF
Sbjct: 135 FGATVQEMQLLNERGCHIVDTTCPWVSKVWNTVEKHKKHAFTSIIHGKVKHEETLATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG Y++V ++ EA V D+IL E ++ +EAF+ F A S GFDPD DLV+VG+AN
Sbjct: 195 AGTYLVVLDLAEARMVSDFIL--ERGQGATDREAFMRHFANACSPGFDPDRDLVRVGVAN 252
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETEEIG+L E+TM++++G ++EHF++FNTICDATQERQDAM+ +V+E +DL
Sbjct: 253 QTTMLKSETEEIGRLFERTMLQRYGPAELDEHFLAFNTICDATQERQDAMFALVDEPLDL 312
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQEIA RGI S+ ID+ +RIGPGN+I +K + GEL + +LP+G
Sbjct: 313 MVVIGGYNSSNTTHLQEIAVSRGIRSFHIDTPERIGPGNRIEHKPLGGELEILKPFLPEG 372
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKRE 333
+ +GITSGASTPD+ VEDV++++ + E
Sbjct: 373 PVRVGITSGASTPDRVVEDVIERLVGLSEE 402
>gi|78211798|ref|YP_380577.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. CC9605]
gi|123578913|sp|Q3AN10.1|ISPH_SYNSC RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|78196257|gb|ABB34022.1| hydroxymethylbutenyl pyrophosphate reductase [Synechococcus sp.
CC9605]
Length = 399
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 197/328 (60%), Positives = 259/328 (78%), Gaps = 7/328 (2%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE RK +P E++WITNEIIHNP+VN L EM VQ IPVE+G K F V GDVV+LPA
Sbjct: 75 MAYETRKHYPSERLWITNEIIHNPSVNDHLREMDVQFIPVEQGVKDFSGVTSGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA V+EM LN + IVDTTCPWVSKVW +VEKHKK +TSIIHGK HEET+AT+SF
Sbjct: 135 FGATVQEMQLLNERGCHIVDTTCPWVSKVWNTVEKHKKHTFTSIIHGKVKHEETLATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG Y++V +++EA+YV DYILG NG +E F+++F KA S GFDPD DL ++G+AN
Sbjct: 195 AGTYLVVLDLEEAQYVADYILG---NGD---REDFIKRFAKACSPGFDPDRDLERLGVAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETEEIG+L E+TM+ K+G +N+HF++FNTICDATQERQDAM+ +V+E +DL
Sbjct: 249 QTTMLKSETEEIGRLFERTMLSKYGPTQLNDHFLAFNTICDATQERQDAMFSLVDEPLDL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPG-NKIAYKLMHGELVEKENWLPK 302
++V+GG+NSSNT+HLQEIA RGI S+ ID+ +RI G N I +K + +L + ++LP+
Sbjct: 309 MVVIGGFNSSNTTHLQEIAVSRGIRSFHIDTPERIDVGSNSIEHKPLAADLCREGDFLPE 368
Query: 303 GQITIGITSGASTPDKAVEDVLKKVFEI 330
G + +GITSGASTPD+AVE+V++K+ ++
Sbjct: 369 GPVRVGITSGASTPDRAVEEVIEKLMQL 396
>gi|260435874|ref|ZP_05789844.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. WH 8109]
gi|260413748|gb|EEX07044.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. WH 8109]
Length = 399
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 197/328 (60%), Positives = 259/328 (78%), Gaps = 7/328 (2%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE RK +P E++WITNEIIHNP+VN L EM VQ IPVE+G K F V GDVV+LPA
Sbjct: 75 MAYETRKHYPSERLWITNEIIHNPSVNDHLREMDVQFIPVEQGVKDFSGVTSGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA V+EM LN + IVDTTCPWVSKVW +VEKHKK +TSIIHGK HEET+AT+SF
Sbjct: 135 FGATVQEMQLLNERGCHIVDTTCPWVSKVWNTVEKHKKHTFTSIIHGKVKHEETLATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG Y++V +++EA+YV DYILG NG ++ F+++F KA S GFDPD DL ++G+AN
Sbjct: 195 AGTYLVVLDLEEAQYVADYILG---NGD---RDDFIQRFAKACSPGFDPDRDLERLGVAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETEEIG+L E+TM+ K+G +N+HF++FNTICDATQERQDAM+ +V+E +DL
Sbjct: 249 QTTMLKSETEEIGRLFERTMLSKYGPTQLNDHFLAFNTICDATQERQDAMFSLVDEPLDL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPG-NKIAYKLMHGELVEKENWLPK 302
++V+GG+NSSNT+HLQEIA RGI S+ ID+ +RI G N I +K + EL + ++LP+
Sbjct: 309 MVVIGGFNSSNTTHLQEIAVSRGIRSFHIDTPERIDVGTNSIEHKPLAAELCCEGDFLPE 368
Query: 303 GQITIGITSGASTPDKAVEDVLKKVFEI 330
G + +GITSGASTPD+AVE+V++K+ ++
Sbjct: 369 GPVRVGITSGASTPDRAVEEVIEKLMQL 396
>gi|302831463|ref|XP_002947297.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase chloroplast
precursor [Volvox carteri f. nagariensis]
gi|300267704|gb|EFJ51887.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase chloroplast
precursor [Volvox carteri f. nagariensis]
Length = 472
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/330 (61%), Positives = 256/330 (77%), Gaps = 9/330 (2%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYEAR+ P++K+++TNEIIHNP VNKRL+EM ++ I E K + + GDVV+ PA
Sbjct: 127 MAYEARQAHPDKKLFVTNEIIHNPEVNKRLKEMNIEIIEDEGDGKDYSQIGNGDVVIFPA 186
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA V+E+ +K VQ+VDTTCPWV+KVW SV+ H + YTS+IHGKYSHEET+ATASF
Sbjct: 187 FGATVKELSDFRDKGVQMVDTTCPWVAKVWNSVDTHTRKQYTSVIHGKYSHEETIATASF 246
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
A Y+IVK++KEA+YVCDYIL G KE FL KF KAVSKGFDPD L +VG+AN
Sbjct: 247 ASNYVIVKDLKEAQYVCDYILHG------GNKEEFLAKFSKAVSKGFDPDTMLDRVGLAN 300
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMV-EEKVD 242
QTTMLKGETE+IGK++E TMM+K+G +N HF+ TICDATQERQDA+Y MV + +VD
Sbjct: 301 QTTMLKGETEQIGKMLEATMMQKYGPAELNNHFLLMETICDATQERQDALYDMVADPEVD 360
Query: 243 LILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIG-PGNKIAYKLMHGELVEKENWLP 301
++VVGG+NSSNTSHLQEIAE +G+PS+W+DS RI N + +KL HGEL E WL
Sbjct: 361 FLIVVGGFNSSNTSHLQEIAEHKGLPSFWVDSAARIDVEKNTVLHKLAHGELRETVGWLT 420
Query: 302 KGQ-ITIGITSGASTPDKAVEDVLKKVFEI 330
G+ +TIGITSGASTPD+AVE+VL KVF+I
Sbjct: 421 PGKPVTIGITSGASTPDRAVEEVLAKVFKI 450
>gi|116075604|ref|ZP_01472863.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. RS9916]
gi|116066919|gb|EAU72674.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. RS9916]
Length = 398
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 195/324 (60%), Positives = 253/324 (78%), Gaps = 6/324 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE RK +P+E+IWITNEIIHNP+VN L EM V+ I V++G K F V GDVV+LPA
Sbjct: 75 MAYETRKHYPDERIWITNEIIHNPSVNDHLREMDVEFIAVDQGVKDFSGVTSGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA V+EM LN + IVDTTCPWVSKVWT+VEKHKK TSIIHGK HEET+AT+SF
Sbjct: 135 FGATVQEMQLLNERGCHIVDTTCPWVSKVWTTVEKHKKQTVTSIIHGKVKHEETLATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG Y++V ++KEA+ V DYILG NG +E F+ KF A S+GFDPD DL ++G+AN
Sbjct: 195 AGTYLVVLDLKEAQMVADYILG---NGD---RETFMTKFAHACSQGFDPDRDLERLGVAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETEEIG+L E+TM+ K+G +NEHF++FNTICDATQERQDAM+ +V+E +DL
Sbjct: 249 QTTMLKSETEEIGRLFERTMLSKYGPTALNEHFLAFNTICDATQERQDAMFSLVDEPLDL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQEIA RGI S+ ID+ +RIG N I +K + +L+ + ++LP G
Sbjct: 309 MVVIGGYNSSNTTHLQEIAVSRGIRSFHIDTPERIGADNSIEHKPLGQDLIREADFLPAG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKV 327
+ +GITSGASTPD+ VE V++++
Sbjct: 369 PVNVGITSGASTPDRVVEHVIQRL 392
>gi|449016877|dbj|BAM80279.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Cyanidioschyzon
merolae strain 10D]
Length = 463
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 199/337 (59%), Positives = 258/337 (76%), Gaps = 16/337 (4%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV---EEGKKQFDV--VNKGDV 58
+A+EAR+QF +++IWITNEIIHNP VN RL+EM + +P E G + D+ + DV
Sbjct: 123 LAFEARRQFADKRIWITNEIIHNPKVNTRLKEMGIFFVPEHVDERGMRHKDLSGIEPSDV 182
Query: 59 VVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETV 118
V+LPAFGA ++EM L+ QIVDTTCPWVSKVW +++KH++ TSIIHGK++HEET+
Sbjct: 183 VILPAFGATLDEMTYLDRLGCQIVDTTCPWVSKVWNALDKHQRARCTSIIHGKWNHEETI 242
Query: 119 ATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVK 178
ATASFA Y+IVK+++EAEYVC+YIL G KEAFL +F+ A+S GFDP+ DL
Sbjct: 243 ATASFAETYLIVKDLEEAEYVCNYILHG------GDKEAFLNRFQNAMSAGFDPERDLNA 296
Query: 179 VGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVE 238
VGIANQTTM+K ET IGKL EKTMMRKFG +++HF++FNTICDATQERQDAM ++VE
Sbjct: 297 VGIANQTTMMKNETAAIGKLFEKTMMRKFGPTELSKHFVAFNTICDATQERQDAMLELVE 356
Query: 239 EKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKEN 298
+ +DLILVVGG+NSSNTSHL EIA RGIP Y +D+ +RIGPGN+I Y+ +HG++ E
Sbjct: 357 QDLDLILVVGGFNSSNTSHLVEIAHQRGIPVYHVDTAERIGPGNRIEYRDVHGQIQRAEY 416
Query: 299 WLPK-----GQITIGITSGASTPDKAVEDVLKKVFEI 330
WLPK G + +G+TSGASTPD+ VE+ L ++F I
Sbjct: 417 WLPKTGKHGGHVRLGVTSGASTPDRYVEECLDRIFLI 453
>gi|113477878|ref|YP_723939.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Trichodesmium
erythraeum IMS101]
gi|122964410|sp|Q10WA8.1|ISPH_TRIEI RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|110168926|gb|ABG53466.1| hydroxymethylbutenyl pyrophosphate reductase [Trichodesmium
erythraeum IMS101]
Length = 401
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 195/328 (59%), Positives = 257/328 (78%), Gaps = 6/328 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ FP ++IWI+ E+IHNP+VN+ +++M ++ IPV +G+K F V DVV+LPA
Sbjct: 75 MAYETRQHFPNQQIWISYELIHNPSVNQDMKDMEIKFIPVIDGQKDFSVAGNNDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V+EM L +KN QIVDTTCPWVSKVW S+EKHKK +TSIIHGKYSH ET+AT+SF
Sbjct: 135 FGASVQEMQILKDKNCQIVDTTCPWVSKVWNSIEKHKKKKFTSIIHGKYSHAETIATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
A KY+IV NM +A+YVC+YIL G ++ FL KFK+A S+GFDPD+DL +VGIAN
Sbjct: 195 ADKYLIVLNMTQAQYVCNYILNG------GNRDEFLAKFKQAYSEGFDPDLDLEQVGIAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETEEIGKL E+TMM+K+ + +N H+ +FNTICDATQERQDA+ + EK+DL
Sbjct: 249 QTTMLKTETEEIGKLFERTMMKKYRPDQLNAHYQNFNTICDATQERQDAIAGLFNEKLDL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQE+A + GIPSY ID +RI NKI +K + E+ E WLP+G
Sbjct: 309 MVVIGGFNSSNTTHLQEMAIENGIPSYHIDGAQRILSRNKIEHKPLGREVKISEGWLPEG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIK 331
+ +G+TSGASTPD+AVED + K+ +K
Sbjct: 369 PVVVGLTSGASTPDQAVEDTINKIVAMK 396
>gi|33864788|ref|NP_896347.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. WH 8102]
gi|50400950|sp|Q7U9K4.1|ISPH_SYNPX RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|33632311|emb|CAE06767.1| LytB protein homolog [Synechococcus sp. WH 8102]
Length = 399
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 195/326 (59%), Positives = 252/326 (77%), Gaps = 7/326 (2%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE RK +P E++WITNEIIHNP+VN L EM VQ IPVE+G K F V GDVV+LPA
Sbjct: 75 MAYETRKHYPAERLWITNEIIHNPSVNDHLREMDVQFIPVEQGVKDFSGVTSGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA V+EM LN + IVDTTCPWVSKVWT+VEKHKK TSIIHGK HEET+AT+SF
Sbjct: 135 FGATVQEMQLLNERGCHIVDTTCPWVSKVWTTVEKHKKHTITSIIHGKVKHEETLATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG Y++V +M+EA+ V DYILG ++AF+++F A S GFDPD DL ++G+AN
Sbjct: 195 AGTYLVVLDMEEAQIVADYILG------KGDRDAFMQRFSAACSPGFDPDRDLSRLGVAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETEEIG+L E+TM+ K+G +N+HF++FNTICDATQERQDAM+ +V+E +DL
Sbjct: 249 QTTMLKSETEEIGRLFERTMLSKYGPAELNDHFVAFNTICDATQERQDAMFSLVDEPLDL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRI-GPGNKIAYKLMHGELVEKENWLPK 302
++V+GG+NSSNT+HLQEIA RGI S+ ID+ R+ N I +K ++ L + N+LP
Sbjct: 309 MVVIGGFNSSNTTHLQEIALSRGIRSFHIDTPDRLDAQANAIEHKPLNENLRLESNFLPA 368
Query: 303 GQITIGITSGASTPDKAVEDVLKKVF 328
G +T+GITSGASTPD+AVE+V++K+
Sbjct: 369 GPVTVGITSGASTPDRAVEEVIEKLM 394
>gi|113953201|ref|YP_729527.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. CC9311]
gi|122945839|sp|Q0IDE5.1|ISPH_SYNS3 RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|113880552|gb|ABI45510.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. CC9311]
Length = 398
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 196/328 (59%), Positives = 251/328 (76%), Gaps = 6/328 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ +P+E+IWITNEIIHNP+VN L EM V I VE G K F V GDVV+LPA
Sbjct: 75 MAYETRRHYPQERIWITNEIIHNPSVNDHLREMDVLFISVEGGVKDFSGVATGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA V+EM LN + IVDTTCPWVSKVWT+VEKHKK +TSIIHGK HEET+AT+SF
Sbjct: 135 FGATVQEMQLLNERGCHIVDTTCPWVSKVWTTVEKHKKQSFTSIIHGKVKHEETLATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG Y++V +++EA V DYILG +E+F+E+F KA S GFDPD DL +G+AN
Sbjct: 195 AGTYLVVLDLEEARLVADYILG------KGNRESFMERFSKACSPGFDPDRDLEHLGVAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETEEIG+L E+TM+ K+G ++NEHF++FNTICDATQERQDAM+ +V+E VDL
Sbjct: 249 QTTMLKSETEEIGRLFERTMLSKYGPTDLNEHFLAFNTICDATQERQDAMFSLVDETVDL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQEIA RGI S+ ID+ +RI N I +K + EL +E +LP G
Sbjct: 309 MVVIGGYNSSNTTHLQEIAVSRGIRSFHIDTPERIHTDNSIEHKPLGEELTVEELFLPSG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIK 331
+T+GITSGASTPD+ VE V++++ +
Sbjct: 369 PVTVGITSGASTPDRVVEHVIQRLIALS 396
>gi|159902832|ref|YP_001550176.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Prochlorococcus
marinus str. MIT 9211]
gi|238687191|sp|A9BDN6.1|ISPH_PROM4 RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|159888008|gb|ABX08222.1| LytB-like protein [Prochlorococcus marinus str. MIT 9211]
Length = 404
Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust.
Identities = 193/334 (57%), Positives = 259/334 (77%), Gaps = 7/334 (2%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ +P+E IWITNEIIHNP+VN L M V+ I E+G K F V +GDVV+LPA
Sbjct: 75 MAYETRRHYPKESIWITNEIIHNPSVNDHLRNMNVRFISAEKGIKNFSSVQEGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA V+EM L+ + I+DTTCPWVSKVW +VEKHKK ++TSIIHGK HEET+AT+SF
Sbjct: 135 FGATVQEMKLLHERGCHIIDTTCPWVSKVWHTVEKHKKHEFTSIIHGKVKHEETLATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG Y++V +++EA+YV +YILG +E FL++F KA S+GFDPD DL ++G+AN
Sbjct: 195 AGTYLVVLDLEEAQYVANYILG------KGDREEFLKRFSKASSQGFDPDRDLQRLGVAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETEEIG+L EKTM+RK+G + EHF++FNTICDAT+ERQDAM+ +V+E +DL
Sbjct: 249 QTTMLKSETEEIGRLFEKTMLRKYGPAELTEHFLAFNTICDATEERQDAMFSLVDEPLDL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPG-NKIAYKLMHGELVEKENWLPK 302
++V+GG+NSSNT+HLQEIA RGI S+ ID+ +RIG N I +K + +L+ ++N+LP+
Sbjct: 309 LVVIGGFNSSNTTHLQEIAISRGIRSFHIDTPERIGDQENTITHKPLGDDLITEKNFLPE 368
Query: 303 GQITIGITSGASTPDKAVEDVLKKVFEIKREEAL 336
G I++GITSGASTPD+ VE V+ K+ + E+A
Sbjct: 369 GNISVGITSGASTPDRVVEHVIHKLINLSEEKAF 402
>gi|78183857|ref|YP_376291.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. CC9902]
gi|123582192|sp|Q3B080.1|ISPH_SYNS9 RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|78168151|gb|ABB25248.1| LytB protein [Synechococcus sp. CC9902]
Length = 399
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 192/328 (58%), Positives = 253/328 (77%), Gaps = 7/328 (2%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ +P E++WITNEIIHNP+VN L EM V IPVEEG K F V GDVV+LPA
Sbjct: 75 MAYETRRHYPSERLWITNEIIHNPSVNDHLREMDVLFIPVEEGVKDFSGVTSGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA V+EM LN + IVDTTCPWVSKVW +VEKHKK +TS+IHGK HEET+AT+SF
Sbjct: 135 FGATVQEMQLLNERGCHIVDTTCPWVSKVWNTVEKHKKHTFTSVIHGKVKHEETLATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG Y++V +++EA+ V DYILG +EAF+++F KA S+GFDPD DL ++G+AN
Sbjct: 195 AGTYLVVLDLEEAQIVVDYILG------KGDREAFMQRFAKACSEGFDPDRDLERLGVAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETEEIG++ E+TM+ K+G ++NEHF+++NTICDATQERQDAM+ +V+E +DL
Sbjct: 249 QTTMLKSETEEIGRMFERTMLSKYGPADLNEHFLAYNTICDATQERQDAMFSLVDEPLDL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIG-PGNKIAYKLMHGELVEKENWLPK 302
++V+GG+NSSNT+HLQEIA RGI S+ ID+ RI N I +K + +L + +LP
Sbjct: 309 LVVIGGFNSSNTTHLQEIAVSRGIRSFHIDTPDRIDETTNSIEHKPLSEDLKRDQVFLPA 368
Query: 303 GQITIGITSGASTPDKAVEDVLKKVFEI 330
G +T+GITSGASTPD+AVE V++K+ +
Sbjct: 369 GPVTVGITSGASTPDRAVEAVIEKLMRL 396
>gi|159486551|ref|XP_001701302.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Chlamydomonas
reinhardtii]
gi|158271785|gb|EDO97597.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Chlamydomonas
reinhardtii]
Length = 465
Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust.
Identities = 199/330 (60%), Positives = 256/330 (77%), Gaps = 9/330 (2%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYEAR P++K+++TNEIIHNP VN RL+EM ++ + E K + ++ GDVV+ PA
Sbjct: 119 MAYEARLAHPDKKVFVTNEIIHNPEVNSRLKEMNIEIVEDEGKGKDYSMIGGGDVVIFPA 178
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA V+E+ K VQ+VDTTCPWV+KVW SV+ H + YTS+IHGKYSHEET+ATASF
Sbjct: 179 FGATVQELTDFKEKGVQMVDTTCPWVAKVWNSVDTHTRKQYTSVIHGKYSHEETIATASF 238
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
A YIIVK++KEA+YVCDYIL G +E FL+KF KAVS GFDP+ L +VG+AN
Sbjct: 239 ASNYIIVKDLKEAQYVCDYILQG------GNREEFLQKFSKAVSAGFDPETMLDRVGLAN 292
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMV-EEKVD 242
QTTMLKGETE+IGK++EKTM+ K+G +N+HF+ TICDATQERQDA+Y+MV + ++D
Sbjct: 293 QTTMLKGETEQIGKMLEKTMLTKYGPAKLNDHFLLMETICDATQERQDALYEMVADPEID 352
Query: 243 LILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIG-PGNKIAYKLMHGELVEKENWLP 301
+++VVGG+NSSNTSHLQEIAE +G+ S+W+DS RI N I +KL HGEL E WL
Sbjct: 353 MMIVVGGFNSSNTSHLQEIAEHKGLASFWVDSAARIDVEKNVILHKLAHGELKETTGWLN 412
Query: 302 KGQ-ITIGITSGASTPDKAVEDVLKKVFEI 330
G+ +TIGITSGASTPD+AVE+VL KVF+I
Sbjct: 413 PGKPVTIGITSGASTPDRAVEEVLHKVFKI 442
>gi|223045771|gb|ACM79143.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Dunaliella
salina]
Length = 474
Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust.
Identities = 198/332 (59%), Positives = 257/332 (77%), Gaps = 11/332 (3%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKK--QFDVVNKGDVVVL 61
+AYEAR+ FP I +TNEIIHNP VN+RL EM V NI E+ +K + ++ GDVV+
Sbjct: 130 MAYEARRAFPGRSIHVTNEIIHNPEVNRRLREMDV-NIVKEDPQKGKDYSKIDNGDVVIF 188
Query: 62 PAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATA 121
PAFG +M +K V IVDTTCPWV+KVW SV+ + K TSIIHGKYSHEETVATA
Sbjct: 189 PAFGVGAPDMKYFRDKGVNIVDTTCPWVAKVWNSVDTYAKKKCTSIIHGKYSHEETVATA 248
Query: 122 SFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGI 181
SFA Y+I+K++ EA+YVCDYIL G +E F++KF KAVSKGFDPDV L +VG+
Sbjct: 249 SFAEDYLIIKDLNEAQYVCDYILKG------GDREEFMKKFSKAVSKGFDPDVHLNRVGL 302
Query: 182 ANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEK- 240
ANQTTMLKGET+ IGK++E+TMM KFG +N+ +HF+ +TICDATQERQDA+Y++ ++
Sbjct: 303 ANQTTMLKGETQAIGKMLERTMMEKFGPQNLQDHFMVMDTICDATQERQDALYEITDDPT 362
Query: 241 VDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIG-PGNKIAYKLMHGELVEKENW 299
+D++LVVGG+NSSNTSHLQEI ++G+P++W+D+ RI N IA+KL +GEL ENW
Sbjct: 363 IDMMLVVGGFNSSNTSHLQEIPHNKGLPAFWVDTADRIDMASNSIAHKLHYGELKVTENW 422
Query: 300 LPKGQITIGITSGASTPDKAVEDVLKKVFEIK 331
LP+G ITIG+TSGASTPD+AVE+VL++VF +K
Sbjct: 423 LPEGPITIGVTSGASTPDRAVEEVLERVFRMK 454
>gi|389650110|gb|AFK94154.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Dunaliella
salina]
Length = 474
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 198/332 (59%), Positives = 257/332 (77%), Gaps = 11/332 (3%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKK--QFDVVNKGDVVVL 61
+AYEAR+ FP I +TNEIIHNP VN+RL EM V NI E+ +K + ++ GDVV+
Sbjct: 130 MAYEARRAFPGRSIHVTNEIIHNPEVNRRLREMDV-NIVKEDPQKGKDYSKIDNGDVVIF 188
Query: 62 PAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATA 121
PAFG +M +K V IVDTTCPWV+KVW SV+ + K TSIIHGKYSHEETVATA
Sbjct: 189 PAFGVGAPDMKYFRDKGVNIVDTTCPWVAKVWNSVDTYAKKKCTSIIHGKYSHEETVATA 248
Query: 122 SFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGI 181
SFA Y+I+K++ EA+YVCDYIL G +E F++KF KAVSKGFDPDV L +VG+
Sbjct: 249 SFAEDYLIIKDLNEAQYVCDYILKG------GDREEFMKKFSKAVSKGFDPDVHLNRVGL 302
Query: 182 ANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEK- 240
ANQTTMLKGET+ IGK++E+TMM KFG +N+ +HF+ +TICDATQERQDA+Y++ ++
Sbjct: 303 ANQTTMLKGETQAIGKMLERTMMEKFGPQNLQDHFMVMDTICDATQERQDALYEITDDPT 362
Query: 241 VDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIG-PGNKIAYKLMHGELVEKENW 299
+D++LVVGG+NSSNTSHLQEI ++G+P++W+D+ RI N IA+KL +GEL ENW
Sbjct: 363 IDMMLVVGGFNSSNTSHLQEIPHNKGLPAFWVDTADRIDMANNSIAHKLHYGELKVTENW 422
Query: 300 LPKGQITIGITSGASTPDKAVEDVLKKVFEIK 331
LP+G ITIG+TSGASTPD+AVE+VL++VF +K
Sbjct: 423 LPEGPITIGVTSGASTPDRAVEEVLERVFRMK 454
>gi|116071531|ref|ZP_01468799.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. BL107]
gi|116065154|gb|EAU70912.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. BL107]
Length = 399
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 191/328 (58%), Positives = 253/328 (77%), Gaps = 7/328 (2%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ +P E++WITNEIIHNP+VN L EM V IPVE+G K F V GDVV+LPA
Sbjct: 75 MAYETRRHYPSERLWITNEIIHNPSVNDHLREMDVLFIPVEKGVKDFSGVTSGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA V+EM LN + IVDTTCPWVSKVW +VEKHKK +TS+IHGK HEET+AT+SF
Sbjct: 135 FGATVQEMQLLNERGCHIVDTTCPWVSKVWNTVEKHKKHTFTSVIHGKVKHEETLATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG Y++V +++EA+ V DYILG +EAF+++F KA S+GFDPD DL ++G+AN
Sbjct: 195 AGTYLVVLDLEEAQIVVDYILG------KGDREAFMQRFAKACSEGFDPDRDLERLGVAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETEEIG++ E+TM+ K+G ++NEHF+++NTICDATQERQDAM+ +V+E +DL
Sbjct: 249 QTTMLKSETEEIGRMFERTMLSKYGPTDLNEHFLAYNTICDATQERQDAMFSLVDEPLDL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPG-NKIAYKLMHGELVEKENWLPK 302
++V+GG+NSSNT+HLQEIA RGI S+ ID+ RI N I +K + +L + +LP
Sbjct: 309 LVVIGGFNSSNTTHLQEIAVSRGIRSFHIDTPDRIDETINSIEHKPLSEDLKRDQVFLPA 368
Query: 303 GQITIGITSGASTPDKAVEDVLKKVFEI 330
G +T+GITSGASTPD+AVE V++K+ +
Sbjct: 369 GPVTVGITSGASTPDRAVEAVIEKLMRL 396
>gi|33864121|ref|NP_895681.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Prochlorococcus
marinus str. MIT 9313]
gi|50400960|sp|Q7V4T7.1|ISPH_PROMM RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|33635705|emb|CAE22029.1| LytB protein homolog [Prochlorococcus marinus str. MIT 9313]
Length = 398
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 189/327 (57%), Positives = 251/327 (76%), Gaps = 6/327 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ +P E+IWITNEIIHNP+VN+ L EM V I E G K F VN GDVV+LPA
Sbjct: 75 MAYETRRHYPSERIWITNEIIHNPSVNEHLREMDVLFIHAEGGVKDFSCVNDGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA V+EM L+ + I+DTTCPWVSKVW +VEKHKK ++TSIIHGK HEET+AT+SF
Sbjct: 135 FGATVQEMELLHERGCHIIDTTCPWVSKVWHTVEKHKKQEFTSIIHGKVKHEETLATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG Y++V ++ EA+ V DYILG + AF+++F KA S FDPD DL ++G+AN
Sbjct: 195 AGTYLVVLDLDEAQLVADYILG------QGDRAAFMKRFAKACSANFDPDQDLQRLGVAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETEEIG+L E+TM+RK+G +N+HF+SFNTICDAT+ERQ AM+ +V+E +DL
Sbjct: 249 QTTMLKSETEEIGRLFERTMLRKYGPIELNKHFLSFNTICDATEERQQAMFSLVDEPLDL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQEIA RGI S+ ID+ +RIG N I +K + +L + N+LP G
Sbjct: 309 LVVIGGFNSSNTTHLQEIAISRGIRSFHIDTPERIGDNNSIQHKPLGEDLFIESNFLPAG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEI 330
+++GITSGASTPD+ VE V++K+ ++
Sbjct: 369 SVSVGITSGASTPDRVVEHVIQKLIDL 395
>gi|72383466|ref|YP_292821.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Prochlorococcus
marinus str. NATL2A]
gi|124025055|ref|YP_001014171.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Prochlorococcus
marinus str. NATL1A]
gi|123620427|sp|Q46HB0.1|ISPH_PROMT RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|166217474|sp|A2C096.1|ISPH_PROM1 RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|72003316|gb|AAZ59118.1| LytB protein [Prochlorococcus marinus str. NATL2A]
gi|123960123|gb|ABM74906.1| LytB [Prochlorococcus marinus str. NATL1A]
Length = 401
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 197/329 (59%), Positives = 254/329 (77%), Gaps = 8/329 (2%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE RK +P E+IWITNEIIHNP+VN L +M V I E+G K F VV GDVV+LPA
Sbjct: 75 MAYETRKHYPNERIWITNEIIHNPSVNDHLRKMNVLFISEEKGVKDFSVVKDGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA V++M L+++ I+DTTCPWVSKVW +VEKHKK +TSIIHGKY HEET+AT+SF
Sbjct: 135 FGATVQDMKLLHDRGCHIIDTTCPWVSKVWHTVEKHKKHTFTSIIHGKYKHEETLATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG Y+++ +++EA YV DYILG +E FL++F KA S GFDPD DL KVG+AN
Sbjct: 195 AGTYLVLFDLEEANYVSDYILG------KGNREDFLKRFSKASSAGFDPDKDLQKVGVAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETEEIG+L EKTM+++FG +NEHF++ NTICDAT+ERQ AM+ +V+E +DL
Sbjct: 249 QTTMLKSETEEIGRLFEKTMLQRFGPAQLNEHFLAINTICDATEERQGAMFSLVDEPLDL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIG-PGNKIAY-KLMHGELVEKENWLP 301
++V+GG+NSSNT+HLQEIA RGI S+ ID+ +RIG N I + L GEL+ +EN+L
Sbjct: 309 MVVIGGFNSSNTTHLQEIAISRGIRSFHIDTPERIGEETNTITHMPLEGGELLTEENFLQ 368
Query: 302 KGQITIGITSGASTPDKAVEDVLKKVFEI 330
G I++GITSGASTPD+ VEDV+ K+ +I
Sbjct: 369 NGNISVGITSGASTPDRVVEDVIHKLMKI 397
>gi|126695625|ref|YP_001090511.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Prochlorococcus
marinus str. MIT 9301]
gi|166217473|sp|A3PAY5.1|ISPH_PROM0 RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|126542668|gb|ABO16910.1| LytB-like protein [Prochlorococcus marinus str. MIT 9301]
Length = 398
Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust.
Identities = 193/328 (58%), Positives = 252/328 (76%), Gaps = 7/328 (2%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ +P E IWITNEIIHNP+VN L +M V+ I + G K F +V+ GDVV+LPA
Sbjct: 75 MAYETRRHYPNENIWITNEIIHNPSVNDHLRKMNVKFISAKNGIKDFSLVSNGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA V+EM L+ K I+DTTCPWVSKVW +VEKHKK +TSIIHGK+ HEET+AT+SF
Sbjct: 135 FGATVQEMKLLHEKGCHIIDTTCPWVSKVWHTVEKHKKHVFTSIIHGKFKHEETLATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKY++V +++EA YV +YILG + F+ KF KA S GFDPD DL +VG+AN
Sbjct: 195 AGKYLVVLDLEEANYVSEYILG------RGNRNEFMNKFAKACSNGFDPDKDLERVGVAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETEEIGK+ E+TM++KFG EN+N HF++FNTICDAT+ERQDAM+ +V+E +D+
Sbjct: 249 QTTMLKSETEEIGKVFERTMLKKFGPENLNSHFLAFNTICDATEERQDAMFSLVDEDLDI 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIG-PGNKIAYKLMHGELVEKENWLPK 302
++V+GG+NSSNT+HLQEIA + I S+ ID+ +RI N I +K + EL K N+LP
Sbjct: 309 LVVIGGFNSSNTTHLQEIAITKNISSFHIDTPERISVKENSIFHKPLGSELELKNNFLPS 368
Query: 303 GQITIGITSGASTPDKAVEDVLKKVFEI 330
G+I +GITSGASTPDK V DV++K+ +I
Sbjct: 369 GKINVGITSGASTPDKVVADVIEKLIDI 396
>gi|123967823|ref|YP_001008681.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Prochlorococcus
marinus str. AS9601]
gi|166217477|sp|A2BP63.1|ISPH_PROMS RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|123197933|gb|ABM69574.1| LytB [Prochlorococcus marinus str. AS9601]
Length = 398
Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust.
Identities = 193/328 (58%), Positives = 253/328 (77%), Gaps = 7/328 (2%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ +P E IWITNEIIHNP+VN L +M V+ I + G K F +V+ GDVV+LPA
Sbjct: 75 MAYETRRHYPNENIWITNEIIHNPSVNDHLRKMNVKFISAKNGIKDFSLVSNGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA V+EM L+ K I+DTTCPWVSKVW +VEKHKK +TSIIHGK+ HEET+AT+SF
Sbjct: 135 FGATVQEMKLLHEKGCHIIDTTCPWVSKVWHTVEKHKKHVFTSIIHGKFKHEETLATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKY++V +++EA YV +YILG + F+ KF KA S GFDPD DL +VG+AN
Sbjct: 195 AGKYLVVLDLEEANYVSEYILG------KGNRNEFMNKFSKAFSNGFDPDKDLDRVGVAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETEEIGK+ E+TM++KFG EN+N HF++FNTICDAT+ERQDAM+ +V+E +D+
Sbjct: 249 QTTMLKSETEEIGKVFERTMLKKFGPENLNSHFLAFNTICDATEERQDAMFSLVDEDLDI 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIG-PGNKIAYKLMHGELVEKENWLPK 302
++V+GG+NSSNT+HLQEIA + I S+ ID+ +RI N I +K + EL K+N+LP
Sbjct: 309 LVVIGGFNSSNTTHLQEIAITKNISSFHIDTPERISVKENSIFHKPLGSELELKKNFLPS 368
Query: 303 GQITIGITSGASTPDKAVEDVLKKVFEI 330
G+I +GITSGASTPDK V DV++K+ +I
Sbjct: 369 GKINVGITSGASTPDKVVADVIEKLIDI 396
>gi|33239748|ref|NP_874690.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
gi|50400964|sp|Q7VDS2.1|ISPH_PROMA RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|33237273|gb|AAP99342.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
Length = 405
Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust.
Identities = 190/328 (57%), Positives = 253/328 (77%), Gaps = 7/328 (2%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ +P E IWITNEIIHNP+VN L M V+ I E+G K F V +GDVV+LPA
Sbjct: 75 MAYETRRHYPTESIWITNEIIHNPSVNDHLRNMNVRFISAEKGIKDFSSVEEGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA V EM L+ + I+DTTCPWVSKVW +VEKHKK +++SIIHGK HEET+AT+SF
Sbjct: 135 FGATVHEMKLLHERGCHIIDTTCPWVSKVWHTVEKHKKHEFSSIIHGKVKHEETLATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG Y++V ++KEA+YV DYILG ++ FL +F +A S+GFDPD DL ++G+AN
Sbjct: 195 AGTYLVVLDLKEAQYVSDYILG------KGNRDDFLRRFSRASSQGFDPDRDLKRLGVAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETEEIG+L EKTM+RK+G +NEHF++FNTICDAT+ERQDAM+ +V+E +DL
Sbjct: 249 QTTMLKSETEEIGRLFEKTMLRKYGPAELNEHFLAFNTICDATEERQDAMFSLVDEPLDL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGP-GNKIAYKLMHGELVEKENWLPK 302
++V+GG+NSSNT+HLQEIA +GI S+ ID+ +RIG N I +K + +L + N+LP+
Sbjct: 309 LVVIGGFNSSNTTHLQEIALAKGIRSFHIDTPERIGEIENTITHKPLGDDLRVESNFLPE 368
Query: 303 GQITIGITSGASTPDKAVEDVLKKVFEI 330
G+I +GITSGASTPD+ VE V++K+ +
Sbjct: 369 GKINVGITSGASTPDRIVEHVIQKLINL 396
>gi|33860822|ref|NP_892383.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Prochlorococcus
marinus subsp. pastoris str. CCMP1986]
gi|50400958|sp|Q7V329.1|ISPH_PROMP RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|33633764|emb|CAE18723.1| LytB protein homolog [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
Length = 398
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 193/330 (58%), Positives = 253/330 (76%), Gaps = 7/330 (2%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ +P+E IWITNEIIHNP+VN L +M V+ I + G K F +V+ GDVV+LPA
Sbjct: 75 MAYETRRHYPDENIWITNEIIHNPSVNDHLRKMNVKFISAKNGIKDFSLVSDGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA V+EM L+ K I+DTTCPWVSKVW +VEKHKK +TSIIHGK+ HEET+AT+SF
Sbjct: 135 FGATVQEMKLLHEKGCHIIDTTCPWVSKVWHTVEKHKKHTFTSIIHGKFKHEETLATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
A KY++V N++EA YV +YILG K FL KF +A S GFDPD DL +VG+AN
Sbjct: 195 ADKYLVVLNLEEANYVSEYILG------RGNKNHFLNKFAQAFSNGFDPDKDLDRVGVAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETEEIGK+ EKTM+ KFG E +N HF++FNTICDAT+ERQDAM+ +V+E +D+
Sbjct: 249 QTTMLKSETEEIGKVFEKTMLHKFGPEKLNSHFLAFNTICDATEERQDAMFSLVDEDLDI 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIG-PGNKIAYKLMHGELVEKENWLPK 302
++V+GG+NSSNT+HLQEIA ++ I S+ ID+ +RI N I +K + E+V K+N++P
Sbjct: 309 LVVIGGYNSSNTTHLQEIAINKNISSFHIDTPERISVKENSILHKPLKSEMVLKKNFIPD 368
Query: 303 GQITIGITSGASTPDKAVEDVLKKVFEIKR 332
G+I +GITSGASTPDK V DV++K+ I +
Sbjct: 369 GEIKVGITSGASTPDKIVADVIEKLIAITK 398
>gi|124024171|ref|YP_001018478.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Prochlorococcus
marinus str. MIT 9303]
gi|166217475|sp|A2CCK3.1|ISPH_PROM3 RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|123964457|gb|ABM79213.1| LytB [Prochlorococcus marinus str. MIT 9303]
Length = 398
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 188/327 (57%), Positives = 250/327 (76%), Gaps = 6/327 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ +P E+IWITNEIIHNP+VN+ L EM V I E G K F V+ GDVV+LPA
Sbjct: 75 MAYETRRHYPSERIWITNEIIHNPSVNEHLREMDVLFIHAEGGVKDFSCVSDGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA V+EM L+ + I+DTTCPWVSKVW +VEKHKK ++TSIIHGK HEET+AT+SF
Sbjct: 135 FGATVQEMELLHERGCHIIDTTCPWVSKVWHTVEKHKKQEFTSIIHGKVKHEETLATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG Y++V ++ EA+ V DYILG + AF+++F KA S FDPD DL ++G+AN
Sbjct: 195 AGTYLVVLDLDEAQLVADYILG------QGDRAAFMKRFAKACSANFDPDQDLQRLGVAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETEEIG+L E+TM+RK+G +N+HF+SFNTICDAT+ERQ AM+ +V+E +DL
Sbjct: 249 QTTMLKSETEEIGRLFERTMLRKYGPIELNKHFLSFNTICDATEERQQAMFSLVDEPLDL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQEIA RGI S+ ID+ +RIG N I +K + +L + N+LP G
Sbjct: 309 LVVIGGFNSSNTTHLQEIAISRGIRSFHIDTPERIGDNNSIQHKPLGEDLFIESNFLPAG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEI 330
+ +GITSGASTPD+ VE V++K+ ++
Sbjct: 369 SVNVGITSGASTPDRVVEHVIQKLIDL 395
>gi|91070606|gb|ABE11505.1| LytB protein-like [uncultured Prochlorococcus marinus clone
HOT0M-8G12]
Length = 398
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 193/328 (58%), Positives = 251/328 (76%), Gaps = 7/328 (2%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ +P E IWITNEIIHNP+VN L +M V+ I + G K F +V+ GDVV+LPA
Sbjct: 75 MAYETRRHYPNENIWITNEIIHNPSVNDHLRKMNVKFISAKNGIKDFSLVSNGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA V+EM L+ K I+DTTCPWVSKVW +VEKHKK +TSIIHGK+ HEET+AT+SF
Sbjct: 135 FGATVQEMKLLHEKGCHIIDTTCPWVSKVWHTVEKHKKHVFTSIIHGKFKHEETLATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKY++V +++EA YV +YILG + F+ KF KA S GFDPD DL +VG+AN
Sbjct: 195 AGKYLVVLDLEEANYVSEYILG------KGNRNKFMNKFAKACSDGFDPDKDLDRVGVAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETEEIGK+ EKTM++KFG EN+N HF++FNTICDAT+ERQDAM+ +V+E +D+
Sbjct: 249 QTTMLKSETEEIGKVFEKTMLKKFGPENLNSHFLAFNTICDATEERQDAMFSLVDEDLDI 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIG-PGNKIAYKLMHGELVEKENWLPK 302
++V+GG+NSSNT+HLQEIA + I S+ ID+ +RI N I +K + +L K N+LP
Sbjct: 309 LVVIGGFNSSNTTHLQEIAITKNITSFHIDTPERISVEDNSILHKPLGSDLELKNNFLPS 368
Query: 303 GQITIGITSGASTPDKAVEDVLKKVFEI 330
G+I +GITSGASTPDK V DV++K+ I
Sbjct: 369 GKINVGITSGASTPDKVVADVIEKLINI 396
>gi|209402479|gb|ACI45962.1| putative plastid isopentenyl diphosphate/dimethylallyl diphosphate
synthase precursor [Pyropia yezoensis]
Length = 386
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 192/333 (57%), Positives = 247/333 (74%), Gaps = 7/333 (2%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+QFP E+IWITNEIIHNP+VN RL EM V +P E K V GDVV+LPA
Sbjct: 52 MAYETRRQFPGERIWITNEIIHNPSVNTRLREMGVLFVPQEGMVKDLSGVAAGDVVILPA 111
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA +EEM L QIVDTTCPWVSKVW +++KHK+ TS+IHGK++HEET+ATASF
Sbjct: 112 FGATLEEMQFLTETGCQIVDTTCPWVSKVWGTLDKHKRVACTSVIHGKWAHEETIATASF 171
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
A KY++V NM EA+YV DYILGG ++ FL KF A+S GFDPD DL VG+AN
Sbjct: 172 ADKYLVVANMAEAQYVADYILGG------GDRDEFLAKFSNAMSAGFDPDTDLSAVGVAN 225
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEE-KVD 242
QTTMLK ET IGKL EKTM+ ++G ++ F++++TICDATQERQDAM ++++ VD
Sbjct: 226 QTTMLKSETAAIGKLFEKTMLVRYGPSDLTTRFVAYDTICDATQERQDAMIELLDAGDVD 285
Query: 243 LILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPK 302
L++V+GG+NSSNTSHLQE+AE G+ SYW+DS + + P N+I Y+ G+ + +LP
Sbjct: 286 LVVVIGGFNSSNTSHLQEMAEHAGVTSYWVDSAECVAPENRIRYRSSDGQEHVVDGFLPT 345
Query: 303 GQITIGITSGASTPDKAVEDVLKKVFEIKREEA 335
G +TIG+TSGASTPDK VEDVL+++F I + A
Sbjct: 346 GPVTIGVTSGASTPDKVVEDVLERLFMIHKLSA 378
>gi|254525505|ref|ZP_05137557.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Prochlorococcus
marinus str. MIT 9202]
gi|221536929|gb|EEE39382.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Prochlorococcus
marinus str. MIT 9202]
Length = 398
Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust.
Identities = 193/328 (58%), Positives = 248/328 (75%), Gaps = 7/328 (2%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ +P+E IW+TNEIIHNP+VN L +M V+ I + G K F V+ GDVV+LPA
Sbjct: 75 MAYETRRHYPDETIWMTNEIIHNPSVNNHLSKMNVKIISAKNGVKDFSPVSLGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA V+EM L+ K I+DTTCPWVSKVW +VEKHKK +TSIIHGKY HEET+AT SF
Sbjct: 135 FGATVQEMQLLHEKECHIIDTTCPWVSKVWHTVEKHKKHTFTSIIHGKYKHEETLATRSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG Y++V ++ EA+YV DYI G K+ F++KF KA S GFDPD+ L ++G+AN
Sbjct: 195 AGNYLVVFDLAEAKYVSDYIEG------KGDKKEFMKKFSKAFSNGFDPDIHLERIGVAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETEEIGKL E TM+RK+G N+N+HF++FNTICDAT+ERQDAM+ +V+E +D+
Sbjct: 249 QTTMLKSETEEIGKLFENTMLRKYGPANINDHFLAFNTICDATEERQDAMFSLVDEDLDI 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIG-PGNKIAYKLMHGELVEKENWLPK 302
++V+GG+NSSNT+HLQEIA I S+ ID RI N I +K + ELV KEN+LP
Sbjct: 309 LVVIGGFNSSNTTHLQEIAITNKIESFHIDISDRISVENNSIFHKPLESELVLKENFLPD 368
Query: 303 GQITIGITSGASTPDKAVEDVLKKVFEI 330
G I +GITSGASTPDK V DV++K+ +I
Sbjct: 369 GDINVGITSGASTPDKVVADVIEKLIDI 396
>gi|299471160|emb|CBN79017.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, chloroplast
precursor [Ectocarpus siliculosus]
Length = 454
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/331 (57%), Positives = 256/331 (77%), Gaps = 7/331 (2%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV-EEGKKQFDVVNKGDVVVLP 62
+A++ARK FP++ + ITNE+IHNP VN++L+EM V +PV ++G K + ++ GDVV+LP
Sbjct: 124 MAFQARKHFPDKTMHITNELIHNPGVNEKLDEMGVNFVPVSDKGGKDLETIDDGDVVILP 183
Query: 63 AFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATAS 122
AFGA++EEM TL+ KNVQ+VDTTCPWVSKVW +V+KH K +TS+IHGK++HEETVATAS
Sbjct: 184 AFGASLEEMQTLDEKNVQVVDTTCPWVSKVWNTVDKHTKAQFTSVIHGKWAHEETVATAS 243
Query: 123 FAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIA 182
F KY++VKNM EAEYV YI G K F+EKFK A+S+GFDPDVDLVKVG+A
Sbjct: 244 FCDKYLVVKNMAEAEYVAAYIANG-----GGDKAEFMEKFKNAMSEGFDPDVDLVKVGLA 298
Query: 183 NQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVD 242
NQTTM K ET +IGKL EKT+M K+G V EH+++F+TICDATQERQDA+ ++VEE++D
Sbjct: 299 NQTTMYKRETRDIGKLFEKTLMEKYGPAEVGEHWMAFDTICDATQERQDAILELVEEEID 358
Query: 243 LILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG-ELVEKENWLP 301
L+LVVGGW+SSNT HL EI+ ++GIP++W++ + P IA+ H E + EN+LP
Sbjct: 359 LMLVVGGWDSSNTQHLAEISANKGIPTFWVNKANCVKPDGSIAHVDPHSMEELRTENFLP 418
Query: 302 KGQITIGITSGASTPDKAVEDVLKKVFEIKR 332
G+I IG+TSGASTPD +E ++ + +K+
Sbjct: 419 AGEIVIGVTSGASTPDAYMEQAVENISMLKK 449
>gi|157412625|ref|YP_001483491.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Prochlorococcus
marinus str. MIT 9215]
gi|157387200|gb|ABV49905.1| hydroxymethylbutenyl pyrophosphate reductase [Prochlorococcus
marinus str. MIT 9215]
Length = 417
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 193/328 (58%), Positives = 247/328 (75%), Gaps = 7/328 (2%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ +P E IW+TNEIIHNP+VN L +M V+ I + G K F V+ GDVV+LPA
Sbjct: 94 MAYETRRHYPNETIWMTNEIIHNPSVNNHLSKMNVKIISAKNGVKDFSPVSLGDVVILPA 153
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA V+EM L+ K I+DTTCPWVSKVW +VEKHKK +TSIIHGKY HEET+AT SF
Sbjct: 154 FGATVQEMQLLHEKECHIIDTTCPWVSKVWHTVEKHKKHTFTSIIHGKYKHEETLATRSF 213
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG Y++V ++ EA+YV DYI G K+ F++KF KA S GFDPD+ L ++G+AN
Sbjct: 214 AGNYLVVFDLAEAKYVSDYIEG------KGDKKEFMKKFSKAFSNGFDPDIHLERIGVAN 267
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETEEIGKL E TM+RK+G N+N+HF++FNTICDAT+ERQDAM+ +V+E +D+
Sbjct: 268 QTTMLKSETEEIGKLFENTMLRKYGPANINDHFLAFNTICDATEERQDAMFSLVDEDLDI 327
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIG-PGNKIAYKLMHGELVEKENWLPK 302
++V+GG+NSSNT+HLQEIA I S+ ID RI N I +K + ELV KEN+LP
Sbjct: 328 LVVIGGFNSSNTTHLQEIAITNKIESFHIDISDRISVEDNSIFHKPLESELVLKENFLPD 387
Query: 303 GQITIGITSGASTPDKAVEDVLKKVFEI 330
G I +GITSGASTPDK V DV++K+ +I
Sbjct: 388 GDINVGITSGASTPDKVVADVIEKLIDI 415
>gi|78778651|ref|YP_396763.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Prochlorococcus
marinus str. MIT 9312]
gi|123554687|sp|Q31CR8.1|ISPH_PROM9 RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|78712150|gb|ABB49327.1| hydroxymethylbutenyl pyrophosphate reductase [Prochlorococcus
marinus str. MIT 9312]
Length = 398
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 191/325 (58%), Positives = 249/325 (76%), Gaps = 7/325 (2%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ +P E IWITNEIIHNP+VN L +M V+ I + G K F +V+ GDVV+LPA
Sbjct: 75 MAYETRRHYPNENIWITNEIIHNPSVNDHLRKMNVKFISAKNGIKDFSLVSNGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA V+EM L+ K I+DTTCPWVSKVW +VEKHKK +TSIIHGK+ HEET+AT+SF
Sbjct: 135 FGATVQEMKLLHEKGCHIIDTTCPWVSKVWHTVEKHKKHVFTSIIHGKFKHEETLATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AGKY++V +++EA Y+ +YILG + F+ KF KA S GFDPD DL +VG+AN
Sbjct: 195 AGKYLVVLDLEEANYISEYILG------RGNRNEFMNKFAKACSDGFDPDKDLDRVGVAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETEEIGK+ EKTM++KFG EN+N HF++FNTICDAT+ERQDAM+ +V+E +D+
Sbjct: 249 QTTMLKSETEEIGKVFEKTMLKKFGPENLNSHFLAFNTICDATEERQDAMFSLVDEDLDI 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIG-PGNKIAYKLMHGELVEKENWLPK 302
++V+GG+NSSNT+HLQEIA + I S+ ID+ +RI N I +K + +L K N+LP
Sbjct: 309 LVVIGGFNSSNTTHLQEIAITKNITSFHIDTPERISVEENSILHKPLGLDLELKNNFLPS 368
Query: 303 GQITIGITSGASTPDKAVEDVLKKV 327
G I +GITSGASTPDK V DV++K+
Sbjct: 369 GNINVGITSGASTPDKVVADVIEKL 393
>gi|352095111|ref|ZP_08956214.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. WH 8016]
gi|351679122|gb|EHA62264.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. WH 8016]
Length = 398
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/327 (59%), Positives = 253/327 (77%), Gaps = 6/327 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ +P+E+IWITNEIIHNP+VN L EM V I VE G K F V GDVV+LPA
Sbjct: 75 MAYETRRHYPQERIWITNEIIHNPSVNDHLREMDVLFISVEGGVKDFSGVASGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA V+EM LN + IVDTTCPWVSKVWT+VEKHKK +TSIIHGK HEET+AT+SF
Sbjct: 135 FGATVQEMQLLNERGCHIVDTTCPWVSKVWTTVEKHKKQSFTSIIHGKVKHEETLATSSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG Y++V +++EA V +YILG NG +EAF+++F A S GFDPD DL ++G+AN
Sbjct: 195 AGTYLVVLDLEEARLVAEYILG---NGD---REAFMKRFSNASSPGFDPDRDLERLGVAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETEEIG+L E+TM+ K+G +NEHF++FNTICDATQERQDAM+ +V+E VDL
Sbjct: 249 QTTMLKSETEEIGRLFERTMLSKYGPTELNEHFLAFNTICDATQERQDAMFSLVDETVDL 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQEIA RGI S+ ID+ +RI N I +K + EL +E +LP+G
Sbjct: 309 MVVIGGYNSSNTTHLQEIAVSRGIRSFHIDTPERIHSDNSIEHKPLGEELTLEELFLPEG 368
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEI 330
+T+GITSGASTPD+ VE V++++ +
Sbjct: 369 PVTVGITSGASTPDRVVEHVIQRLIAL 395
>gi|15281777|gb|AAK94426.1|AF398145_1 LYTB-like protein 1 [Brassica rapa subsp. pekinensis]
Length = 221
Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust.
Identities = 193/221 (87%), Positives = 210/221 (95%)
Query: 119 ATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVK 178
ATASFAGKYIIVKNMKEA YVCDYILGGEL+GSSSTKE F+EKFK AVSKGFDPD DL+K
Sbjct: 1 ATASFAGKYIIVKNMKEANYVCDYILGGELDGSSSTKEEFMEKFKYAVSKGFDPDSDLIK 60
Query: 179 VGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVE 238
VGIANQTTMLKGETEEIGKL+E+TMMRK+GVENVN HFISFNTICDATQERQDA+Y++VE
Sbjct: 61 VGIANQTTMLKGETEEIGKLIERTMMRKYGVENVNGHFISFNTICDATQERQDAIYELVE 120
Query: 239 EKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKEN 298
EK+DL+LVVGGWNSSNTSHLQEI+E RGIPSYWIDSE+RIGPGNKIAYKL +GELVEKEN
Sbjct: 121 EKIDLMLVVGGWNSSNTSHLQEISEVRGIPSYWIDSEQRIGPGNKIAYKLHYGELVEKEN 180
Query: 299 WLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 339
+LPKG ITIG+TSGASTPDK VEDVL KVF+IKREE LQLA
Sbjct: 181 FLPKGPITIGVTSGASTPDKVVEDVLVKVFDIKREELLQLA 221
>gi|123965532|ref|YP_001010613.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Prochlorococcus
marinus str. MIT 9515]
gi|166217476|sp|A2BUP5.1|ISPH_PROM5 RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|123199898|gb|ABM71506.1| LytB [Prochlorococcus marinus str. MIT 9515]
Length = 398
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 191/330 (57%), Positives = 244/330 (73%), Gaps = 7/330 (2%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ +P E IW+TNEIIHNP+VN L M V+ I + G K F V+ GDVV+LPA
Sbjct: 75 MAYETRRHYPNEDIWMTNEIIHNPSVNNHLSRMNVKIISAKNGIKDFSSVSTGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA V+EM L+ K QI+DTTCPWVSKVW +VEKHKK +TSIIHGKY HEET+AT SF
Sbjct: 135 FGATVQEMQLLHEKKCQIIDTTCPWVSKVWHTVEKHKKHTFTSIIHGKYKHEETLATRSF 194
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG Y++V ++ EAEYV +YI G K F+ KF KA S GFDPDV L ++G+AN
Sbjct: 195 AGNYLVVFDLDEAEYVSNYIQG------HGDKNKFMNKFAKACSDGFDPDVHLERIGVAN 248
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETEEIGK EKTM+ K+G N+N+HF++FNTICDAT+ERQDAM+ +V E +D+
Sbjct: 249 QTTMLKSETEEIGKFFEKTMLMKYGPANINDHFLAFNTICDATEERQDAMFSLVNEDLDI 308
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIG-PGNKIAYKLMHGELVEKENWLPK 302
++V+GG+NSSNT+HLQEIA I S+ ID RI N I +K + EL+ K+N++P
Sbjct: 309 LVVIGGFNSSNTTHLQEIAISNNIESFHIDISDRISVENNSICHKPLESELILKKNFIPD 368
Query: 303 GQITIGITSGASTPDKAVEDVLKKVFEIKR 332
G+I +GITSGASTPDK V DV++K+ I +
Sbjct: 369 GKIKVGITSGASTPDKIVADVIEKLIAITQ 398
>gi|15281779|gb|AAK94427.1|AF398146_1 LYTB-like protein 2 [Brassica rapa subsp. pekinensis]
Length = 223
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 191/223 (85%), Positives = 211/223 (94%)
Query: 115 EETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDV 174
E+T+ATASFAGKYIIVKNMKEA YVCDYILGGEL+GSSSTKE F+EKFK AVSKGFDPD
Sbjct: 1 EDTIATASFAGKYIIVKNMKEANYVCDYILGGELDGSSSTKEEFMEKFKYAVSKGFDPDS 60
Query: 175 DLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMY 234
DL+KVGIANQTTMLKGETEEIGKL+E+TMMRK+GVENVN HFISFNTICDATQERQDA+Y
Sbjct: 61 DLIKVGIANQTTMLKGETEEIGKLIERTMMRKYGVENVNGHFISFNTICDATQERQDAIY 120
Query: 235 KMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELV 294
++VEEK+DL+LVVGGWNSSNTSHLQEI+E RGIPSYWIDSE+RIGPGNKIAYKL +GELV
Sbjct: 121 ELVEEKIDLMLVVGGWNSSNTSHLQEISEVRGIPSYWIDSEQRIGPGNKIAYKLHYGELV 180
Query: 295 EKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEALQ 337
EKEN+LPKG ITIG+TSGASTPDK VEDVL KVF+IKRE+ L
Sbjct: 181 EKENFLPKGPITIGVTSGASTPDKVVEDVLVKVFDIKREKLLH 223
>gi|37522868|ref|NP_926245.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Gloeobacter
violaceus PCC 7421]
gi|50400939|sp|Q7NG74.1|ISPH_GLOVI RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|35213870|dbj|BAC91240.1| glr3299 [Gloeobacter violaceus PCC 7421]
Length = 417
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 185/333 (55%), Positives = 249/333 (74%), Gaps = 11/333 (3%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEG----KKQFDVVNKGDVV 59
+AYE + F ++WITNEIIHNP VN+ L M ++ + +E K F+ V++ DVV
Sbjct: 65 MAYETHRMFAGRQLWITNEIIHNPLVNQHLRAMGIRFLDEDESGRRVPKDFERVSEKDVV 124
Query: 60 VLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVA 119
+LPAFGA+ +EM L+ KN IVDTTCPWVS VW V K+ + ++TSIIHGKY HEETVA
Sbjct: 125 ILPAFGASTQEMQILDEKNCVIVDTTCPWVSAVWNRVGKYDRAEFTSIIHGKYQHEETVA 184
Query: 120 TASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKV 179
TAS A +Y++V N++EA+ VCDYIL G + AFL F A +GFDPD DLV+V
Sbjct: 185 TASRARRYLVVLNLEEAQQVCDYILHG------GDRRAFLAHFGMAACEGFDPDRDLVRV 238
Query: 180 GIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEE 239
GIANQTTMLKGETE IGKL E+TMMR++G N+ +HF+S +TICDATQERQDAM+K+VEE
Sbjct: 239 GIANQTTMLKGETERIGKLFERTMMRRYGPANLADHFMSHDTICDATQERQDAMFKLVEE 298
Query: 240 KVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGE-LVEKEN 298
+DL++V+GG+NSSNT+HLQEIA +RG+PS+ ID R+ I ++ +H + LV +N
Sbjct: 299 PLDLLVVIGGYNSSNTTHLQEIAVERGLPSFHIDGADRLVSAQFIEHRDLHSKSLVRTKN 358
Query: 299 WLPKGQITIGITSGASTPDKAVEDVLKKVFEIK 331
WLP G++T+G+T+GASTPD+ V +V+ ++FE+K
Sbjct: 359 WLPAGEVTVGVTAGASTPDRVVAEVIARIFELK 391
>gi|384248977|gb|EIE22460.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Coccomyxa
subellipsoidea C-169]
Length = 438
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/336 (58%), Positives = 256/336 (76%), Gaps = 15/336 (4%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGK-KQFDVVNKGDVVVLP 62
+AYEARKQ+P K+ +TNEIIHNP VN+RL+EM V NI + GK K F + DVV+LP
Sbjct: 86 MAYEARKQYPNSKLHVTNEIIHNPAVNQRLKEMEV-NIIEDVGKGKDFSGIKGEDVVILP 144
Query: 63 AFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATAS 122
AFGA+ +EM L++K VQIVDTTCPWV+KVW++V+ + +TSIIHGKYSHEET+ATAS
Sbjct: 145 AFGASWQEMKMLSDKGVQIVDTTCPWVAKVWSAVDNQARKQHTSIIHGKYSHEETIATAS 204
Query: 123 FAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIA 182
FA Y+IV+++ E +YV DYIL G +E FL KF A+S+GFDPD DL+++G+A
Sbjct: 205 FATTYLIVRDIPETQYVVDYILNG------GDREEFLAKFSNAMSEGFDPDRDLLRIGLA 258
Query: 183 NQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVE---- 238
NQTTML+ ET IGK++EKTMM+K+G + +H++ +TICDATQERQDA+ ++V+
Sbjct: 259 NQTTMLRDETLTIGKMLEKTMMQKYGPAELKDHYMVLDTICDATQERQDAVTELVQKQSD 318
Query: 239 --EKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIG-PGNKIAYKLMHGELVE 295
E+VD +LVVGG+NSSNTSHLQEI E G+PS+W++S + NKI +KL HGELVE
Sbjct: 319 PAERVDFMLVVGGFNSSNTSHLQEIPEMAGVPSFWVNSAACVDVEHNKITHKLAHGELVE 378
Query: 296 KENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIK 331
+ WL G IT+G+TSGASTPD+AVE+VL K+F IK
Sbjct: 379 TQPWLRDGPITVGVTSGASTPDRAVEEVLDKLFRIK 414
>gi|86605836|ref|YP_474599.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. JA-3-3Ab]
gi|86554378|gb|ABC99336.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. JA-3-3Ab]
Length = 426
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 181/330 (54%), Positives = 250/330 (75%), Gaps = 7/330 (2%)
Query: 5 AYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV-EEGKKQFDVVNKGDVVVLPA 63
AYEAR++FP+ +IWITNEIIHNP VN+ L+EM ++ + +GKK F + DVV+ PA
Sbjct: 90 AYEARRRFPDRQIWITNEIIHNPLVNRHLQEMGIRFVEKGPDGKKDFSQIRPEDVVIWPA 149
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V EM ++ +IVDTTCPWVS+VW V+KH+ +TS+IHGKY+HEETVAT+SF
Sbjct: 150 FGASVSEMEFFRSQGNEIVDTTCPWVSRVWNQVDKHRAAQFTSVIHGKYNHEETVATSSF 209
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
A KY++V N++EAE+V YIL G G ++ F +F KA S GFDPD DL ++GIAN
Sbjct: 210 AQKYLVVLNLEEAEWVARYILHG---GDAAE---FRRRFGKATSPGFDPDRDLERIGIAN 263
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTML+GET I KL E TM+RK+G + +++HF+SFNTIC+ATQERQDAM++++E +D+
Sbjct: 264 QTTMLEGETRAIAKLFETTMLRKYGPQELDKHFMSFNTICNATQERQDAMFELLERPLDV 323
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQEIA +G+PSY ID I P N+I +K +H + + E WLP G
Sbjct: 324 VVVIGGFNSSNTTHLQEIALAKGLPSYHIDGPDCIQPPNRIRHKPLHQDPIVTEGWLPDG 383
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKRE 333
+ IGITSGASTPD+ VE+V+ ++F ++ +
Sbjct: 384 PVQIGITSGASTPDRVVEEVILRIFALREQ 413
>gi|86610071|ref|YP_478833.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. JA-2-3B'a(2-13)]
gi|86558613|gb|ABD03570.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synechococcus
sp. JA-2-3B'a(2-13)]
Length = 419
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 179/330 (54%), Positives = 249/330 (75%), Gaps = 7/330 (2%)
Query: 5 AYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV-EEGKKQFDVVNKGDVVVLPA 63
AYEAR++FP+ ++WITNEIIHNP VN+ L+EM ++ + +GKK F + DVV+ PA
Sbjct: 90 AYEARRRFPDRQLWITNEIIHNPLVNQHLKEMGIRFVEKGPDGKKDFSQIRPQDVVIWPA 149
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+ EM ++ +IVDTTCPWVS+VW V+KH+ +TS+IHGKY+HEETVAT+SF
Sbjct: 150 FGASASEMAFFRSQGNEIVDTTCPWVSRVWNQVDKHRAAQFTSVIHGKYNHEETVATSSF 209
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
A KY++V N++EAE+V YIL G G ++ F +F KA S GFDPD DL ++GIAN
Sbjct: 210 AEKYLVVLNLEEAEWVARYILQG---GDAAE---FRRRFGKATSPGFDPDRDLERIGIAN 263
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTML+GET I KL E TM+RK+G + ++ HF+SFNTIC+ATQERQDAM++++E+ +D+
Sbjct: 264 QTTMLEGETRAIAKLFETTMLRKYGPQELDNHFMSFNTICNATQERQDAMFELLEQPLDV 323
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+HLQEIA +G+PS+ ID I P N+I +K +H + E WLP G
Sbjct: 324 VVVIGGFNSSNTTHLQEIALAKGLPSFHIDGPDCIQPNNRIRHKPLHQDPTVTEGWLPDG 383
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKRE 333
+ IGITSGASTPD+ VE+V++++F ++ E
Sbjct: 384 PVQIGITSGASTPDRVVEEVIQRIFALREE 413
>gi|50540736|gb|AAT77892.1| putative LytB protein [Oryza sativa Japonica Group]
gi|108710908|gb|ABF98703.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, putative,
expressed [Oryza sativa Japonica Group]
gi|222632340|gb|EEE64472.1| hypothetical protein OsJ_19322 [Oryza sativa Japonica Group]
Length = 249
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/240 (74%), Positives = 212/240 (88%), Gaps = 2/240 (0%)
Query: 97 EKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKE 156
E+H KG+YT+IIHGKY+HEETVATASFA KYIIVK++ EA+YVCDYIL G+L+GSSSTKE
Sbjct: 3 ERHIKGNYTTIIHGKYAHEETVATASFADKYIIVKDITEAKYVCDYILEGQLDGSSSTKE 62
Query: 157 AFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVE--NVNE 214
FL+KF+ AVS GFDPD+DL +VG+ NQTTMLKGET+EIG L+E+TMM K+G++ N E
Sbjct: 63 KFLKKFRYAVSPGFDPDIDLERVGVVNQTTMLKGETKEIGILIEQTMMSKYGLDQNNKQE 122
Query: 215 HFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDS 274
HF+ TIC+ATQERQDAMYK+VE++VDLILVVGGWNSSNTSHLQEI E GIPSYW+D
Sbjct: 123 HFVRVGTICNATQERQDAMYKLVEKEVDLILVVGGWNSSNTSHLQEIGELSGIPSYWVDG 182
Query: 275 EKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREE 334
E+RIGPGNKI+YK +GELVEK+ WLP G ITIG+TSGASTPDK VEDVL+KVFEIKR+E
Sbjct: 183 EQRIGPGNKISYKQKNGELVEKDKWLPHGAITIGVTSGASTPDKVVEDVLQKVFEIKRQE 242
>gi|254416811|ref|ZP_05030560.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Coleofasciculus
chthonoplastes PCC 7420]
gi|196176357|gb|EDX71372.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Coleofasciculus
chthonoplastes PCC 7420]
Length = 393
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/328 (54%), Positives = 233/328 (71%), Gaps = 15/328 (4%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE R+ FP E+IW+TNEIIHNP+VN+RL++M V +PVE+G K F VV GDVV+LPA
Sbjct: 75 MAYETRQHFPTERIWMTNEIIHNPSVNQRLQKMNVNFVPVEDGTKDFTVVGAGDVVILPA 134
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA+V+EM LN+K +IVDTTCPWVSKV
Sbjct: 135 FGASVQEMQLLNDKKCKIVDTTCPWVSKVXXXXXXXXX---------XXXXXXXXXXXXX 185
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AEY+ +YIL G ++ F+ KF +A S+GFDPD DL +GIAN
Sbjct: 186 XXXXXXXXXXXXAEYIANYILNG------GNRDEFMAKFSRATSEGFDPDRDLEHIGIAN 239
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTTMLK ETE+IGKL E+TMM+K+G +N+HF SFNTICDATQERQDAM ++VEE++DL
Sbjct: 240 QTTMLKSETEQIGKLFERTMMKKYGPVQLNQHFQSFNTICDATQERQDAMLELVEERLDL 299
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NSSNT+ LQ+IA +R IPSY IDS +RIGPGN+I +K++H ++ ENWLP+G
Sbjct: 300 MVVIGGFNSSNTTQLQQIAIERKIPSYHIDSAERIGPGNRIDHKVLHQDMTVTENWLPEG 359
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIK 331
+I +G+TSGASTPDK VED ++K+FE+K
Sbjct: 360 EIVVGVTSGASTPDKVVEDAIEKIFELK 387
>gi|428178370|gb|EKX47246.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Guillardia
theta CCMP2712]
Length = 435
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/329 (54%), Positives = 239/329 (72%), Gaps = 7/329 (2%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYEAR + ++KI ITNEIIHNP VN RL++M +PV G K F V +GDVVVLPA
Sbjct: 104 MAYEARSFYKDDKIHITNEIIHNPGVNGRLKDMGYNFVPVNGGVKDFSDVKEGDVVVLPA 163
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA++EEM L++K +IVDTTCPWVSKVW +V+ H++ D TS+IHGK++HEE++ATAS
Sbjct: 164 FGASLEEMQLLDSKGCRIVDTTCPWVSKVWNAVDTHRRKDMTSVIHGKWAHEESIATASM 223
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
A YII+K+M+EA+YV +YIL G KE F+ KFK A S GFDPD DL KVGIAN
Sbjct: 224 ADTYIIIKDMEEAKYVTNYILNG------GNKEEFMAKFKNACSSGFDPDRDLKKVGIAN 277
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMV-EEKVD 242
QTTM K ET I KL E+TM++KFG ENVN HF++ +TICDATQERQDA+ ++ ++ VD
Sbjct: 278 QTTMYKEETAAIAKLFERTMLKKFGPENVNVHFMALDTICDATQERQDAINDLIRDDSVD 337
Query: 243 LILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPK 302
L+VGGW+SSNT HL EI G Y ID RI I ++ G + +++LPK
Sbjct: 338 FYLIVGGWDSSNTGHLLEIVHMNGKVGYHIDMAHRIREDGSIEHRETDGTITVTKDFLPK 397
Query: 303 GQITIGITSGASTPDKAVEDVLKKVFEIK 331
G++T+G+TSGASTPD+ +++ +++V +K
Sbjct: 398 GKVTVGVTSGASTPDRYLQESVERVLMLK 426
>gi|57335867|emb|CAH25335.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Guillardia
theta]
Length = 330
Score = 368 bits (945), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 180/330 (54%), Positives = 238/330 (72%), Gaps = 7/330 (2%)
Query: 6 YEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFG 65
YEAR + ++KI ITNEIIHNP VN RL++M +PV G K F V +GDVVVLPAFG
Sbjct: 1 YEARSFYKDDKIHITNEIIHNPGVNGRLKDMGYNFVPVNGGVKDFSDVKEGDVVVLPAFG 60
Query: 66 AAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAG 125
A++EEM L++K +IVDTTCPWVSKVW +V+ H++ D TS+IHGK++HEE++ATAS A
Sbjct: 61 ASLEEMQLLDSKGCRIVDTTCPWVSKVWNAVDTHRRKDMTSVIHGKWAHEESIATASMAD 120
Query: 126 KYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQT 185
YII+K+M+EA+YV +YIL G KE F+ KFK A S GFDPD DL KVGIANQT
Sbjct: 121 TYIIIKDMEEAKYVTNYILNG------GNKEEFMAKFKNACSSGFDPDRDLKKVGIANQT 174
Query: 186 TMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMV-EEKVDLI 244
TM K ET I KL E+TM++KFG ENVN HF++ +TICDATQERQDA+ ++ ++ VD
Sbjct: 175 TMYKEETAAIAKLFERTMLKKFGPENVNVHFMALDTICDATQERQDAINDLIRDDSVDFY 234
Query: 245 LVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQ 304
L+VGGW+SSNT HL EI G Y ID RI I ++ G + +++LPKG+
Sbjct: 235 LIVGGWDSSNTGHLLEIVHMNGKVGYHIDMAHRIREDGSIEHRETDGTITVTKDFLPKGK 294
Query: 305 ITIGITSGASTPDKAVEDVLKKVFEIKREE 334
+T+G+TSGASTPD+ +++ +++V +K E
Sbjct: 295 VTVGVTSGASTPDRYLQESVERVLMLKALE 324
>gi|62321441|dbj|BAD94833.1| hypothetical protein [Arabidopsis thaliana]
Length = 207
Score = 367 bits (943), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 175/207 (84%), Positives = 193/207 (93%)
Query: 133 MKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGET 192
MKEA YVCDYILGG+ +GSSSTKE F+EKFK A+SKGFDPD DLVKVGIANQTTMLKGET
Sbjct: 1 MKEANYVCDYILGGQYDGSSSTKEEFMEKFKYAISKGFDPDNDLVKVGIANQTTMLKGET 60
Query: 193 EEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNS 252
EEIG+L+E TMMRK+GVENV+ HFISFNTICDATQERQDA+Y++VEEK+DL+LVVGGWNS
Sbjct: 61 EEIGRLLETTMMRKYGVENVSGHFISFNTICDATQERQDAIYELVEEKIDLMLVVGGWNS 120
Query: 253 SNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSG 312
SNTSHLQEI+E RGIPSYWIDSEKRIGPGNKIAYKL +GELVEKEN+LPKG ITIG+TSG
Sbjct: 121 SNTSHLQEISEARGIPSYWIDSEKRIGPGNKIAYKLHYGELVEKENFLPKGPITIGVTSG 180
Query: 313 ASTPDKAVEDVLKKVFEIKREEALQLA 339
ASTPDK VED L KVF+IKREE LQLA
Sbjct: 181 ASTPDKVVEDALVKVFDIKREELLQLA 207
>gi|224002076|ref|XP_002290710.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220974132|gb|EED92462.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 462
Score = 367 bits (942), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 186/340 (54%), Positives = 244/340 (71%), Gaps = 19/340 (5%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNI-PVEEGKKQFDVVNKGDVVVLP 62
+AYEA + FP + + ITNE+IHNP VN +L +M VQ I + EGKK F + +GDVV+LP
Sbjct: 125 LAYEAVEHFPGKTVHITNELIHNPEVNDKLHDMNVQFIEKLGEGKKDFSKIGEGDVVILP 184
Query: 63 AFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATAS 122
AFGA+ EEM +NNKNV++VDTTCPWVSKVW +V++H++ TS+IHGKY HEETVAT S
Sbjct: 185 AFGASFEEMTLMNNKNVEVVDTTCPWVSKVWNTVDQHQRKGLTSVIHGKYGHEETVATVS 244
Query: 123 FAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIA 182
F YI VK++KEAE V DYI+ G KE FL+ F+KAVSKGFDPD L KVG+A
Sbjct: 245 FCEDYICVKDIKEAEMVADYIING------GDKEKFLKYFEKAVSKGFDPDTMLDKVGLA 298
Query: 183 NQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEK-- 240
NQTTM K ET IG+L++K MM+KFG N +H++ F+TICDATQERQDA+ +VE
Sbjct: 299 NQTTMYKKETRAIGQLMQKAMMKKFGPVNAKDHYLEFDTICDATQERQDAISDLVENSDE 358
Query: 241 --VDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEK-- 296
+D ILVVGGW+SSNT+HL EI E G+ S+ I+ + IG N I ++ + GE+V +
Sbjct: 359 LGLDFILVVGGWDSSNTAHLLEIPEKAGVRSFHINKSECIGADNTITHRTVDGEIVTEKF 418
Query: 297 ----ENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKR 332
EN ++ +G+TSGASTPDKAV+D L ++F +K+
Sbjct: 419 IEDIEN--KDKKLVMGVTSGASTPDKAVQDSLDQIFMLKK 456
>gi|261036397|gb|ACX54449.1| LYTB-like protein 1 [Epipremnum aureum]
Length = 204
Score = 366 bits (939), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 174/204 (85%), Positives = 189/204 (92%)
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
A YVCDYILGGEL+GSSSTKE FLEKFK A+S GFDPD DLVKVGIANQTTMLKGETEEI
Sbjct: 1 AMYVCDYILGGELDGSSSTKEDFLEKFKYAISAGFDPDTDLVKVGIANQTTMLKGETEEI 60
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
GKLVEKTMM+K+G++NVN HF+SFNTICDATQERQDAMY +V+EK+DL+LVVGGWNSSNT
Sbjct: 61 GKLVEKTMMQKYGIQNVNNHFMSFNTICDATQERQDAMYNLVKEKIDLMLVVGGWNSSNT 120
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
SHLQEIAE GIPSYWIDSE RIGPGN+I+YKL HGELVEKENWLP G ITIGITSGAST
Sbjct: 121 SHLQEIAEVNGIPSYWIDSEHRIGPGNRISYKLNHGELVEKENWLPPGPITIGITSGAST 180
Query: 316 PDKAVEDVLKKVFEIKREEALQLA 339
PDK VEDVL KVF++KREEALQLA
Sbjct: 181 PDKVVEDVLVKVFKLKREEALQLA 204
>gi|171363683|dbj|BAG14390.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Perkinsus
marinus]
Length = 575
Score = 356 bits (914), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 193/377 (51%), Positives = 250/377 (66%), Gaps = 53/377 (14%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEG-KKQFDVVNKGDVVVLP 62
IAYE+ +++P++ IW+TNE+IHNPTVN+ LEE+ ++ IP + G +K F VV+ GDVV+LP
Sbjct: 194 IAYESSRRYPDKTIWMTNEVIHNPTVNRNLEELGIRYIPRDAGNQKDFSVVSAGDVVILP 253
Query: 63 AFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATAS 122
AFGAAV+EM+ L K V IVDTTCPWVSKVW+SVE+HKKG+YTSIIHGK HEET+AT+S
Sbjct: 254 AFGAAVKEMMELKRKGVTIVDTTCPWVSKVWSSVERHKKGEYTSIIHGKSKHEETIATSS 313
Query: 123 FAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAV-SKGFDPDVDLVKVGI 181
FA KY+I+KN+K+AEYVC ++L + F EKF S GFDP DL KVG+
Sbjct: 314 FADKYLILKNLKDAEYVCKFLLS---KNKERLVDDFFEKFPADRHSVGFDPLKDLEKVGV 370
Query: 182 ANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEK- 240
ANQTTMLKGET I KL EKT+++ +G E +NEHF++FNTICDATQ+RQDA+YK+V EK
Sbjct: 371 ANQTTMLKGETALIAKLFEKTILQLYGPEGLNEHFVAFNTICDATQDRQDALYKLVGEKY 430
Query: 241 -----------------------------VDLILVVGGWNSSNTSHLQEIAEDRG----I 267
+D++LVVGG+NSSNT HLQEI+ + G
Sbjct: 431 EQPQSDMLEELGVDTPKTTDPQVTPTATKLDMMLVVGGFNSSNTEHLQEISVEAGGVKDH 490
Query: 268 PSYWIDSEKRIGP-GNKIAYKLM----------HGELVEKENWLPKG--QITIGITSGAS 314
++ ID RI N I +K + HG L ++LP ITIG+TSGAS
Sbjct: 491 RAFHIDGPARIDELRNTITHKPVETPPIEAARNHG-LAVTHDFLPGDGEHITIGVTSGAS 549
Query: 315 TPDKAVEDVLKKVFEIK 331
TPD +E L+K+ K
Sbjct: 550 TPDDVLEQSLQKLLRTK 566
>gi|219115643|ref|XP_002178617.1| hydroxymethylbutenyl diphosphate reductase [Phaeodactylum
tricornutum CCAP 1055/1]
gi|209402471|gb|ACI45958.1| putative plastid isopentenyl diphosphate/dimethylallyl diphosphate
synthase precursor [Phaeodactylum tricornutum]
gi|217410352|gb|EEC50282.1| hydroxymethylbutenyl diphosphate reductase [Phaeodactylum
tricornutum CCAP 1055/1]
Length = 458
Score = 355 bits (912), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 180/335 (53%), Positives = 237/335 (70%), Gaps = 12/335 (3%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNI-PVEEGKKQFDVVNKGDVVVLP 62
+AYEA + FP+ K+ ITNE+IHNP VN+ L+ VQ I + +G K F V GDVV+LP
Sbjct: 123 LAYEAAEHFPDRKLHITNELIHNPEVNENLKAKNVQFIEKLGDGTKNFASVQDGDVVILP 182
Query: 63 AFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATAS 122
AFGA+ EEM + KNV+IVDTTCPWVSKVW +V+KH+K TS+IHGKY+HEETVAT S
Sbjct: 183 AFGASFEEMDYFDKKNVEIVDTTCPWVSKVWNTVDKHQKQGLTSVIHGKYAHEETVATTS 242
Query: 123 FAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIA 182
F +I VKN KEAE V +YIL G K+AF++ F+ AVS+GFDPD L KVG+A
Sbjct: 243 FCEDFICVKNFKEAEMVANYILNG------GDKDAFMKHFENAVSEGFDPDKHLEKVGLA 296
Query: 183 NQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVE---- 238
NQTTM K ET IG+L +KTMM+KFG EH++ F+TICDATQERQDA++ MVE
Sbjct: 297 NQTTMYKKETRAIGQLFQKTMMKKFGPVKSKEHYMEFDTICDATQERQDAIHDMVESAQK 356
Query: 239 EKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKEN 298
+ +D ILV+GGW+SSNT+HL EI GI ++ I+ + IG N I ++ + GE+V +
Sbjct: 357 DGLDFILVIGGWDSSNTAHLLEIPVHAGIRAFHINRAECIGADNTITHRTVDGEIVTTQL 416
Query: 299 WLP-KGQITIGITSGASTPDKAVEDVLKKVFEIKR 332
++ +G+TSGASTPD AV+D L ++F +K+
Sbjct: 417 LEDMDKEVVMGVTSGASTPDAAVQDSLSQIFLLKK 451
>gi|375152238|gb|AFA36577.1| putative 4-hydroxy-3-methylbut-2-enyl diphosphate reductase,
partial [Lolium perenne]
Length = 201
Score = 350 bits (898), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 163/201 (81%), Positives = 184/201 (91%)
Query: 139 VCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKL 198
VCDYILGG+L+GSSST+E FLEKFK A+S FDPD+DL KVGIANQTTMLKGETEEIGKL
Sbjct: 1 VCDYILGGQLDGSSSTREEFLEKFKNAISPEFDPDLDLEKVGIANQTTMLKGETEEIGKL 60
Query: 199 VEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHL 258
VEKTM+RKFGVEN N+HF++FNTICDATQERQDAMY++V++KVDLILVVGGWNSSNTSHL
Sbjct: 61 VEKTMLRKFGVENANDHFVAFNTICDATQERQDAMYQLVKDKVDLILVVGGWNSSNTSHL 120
Query: 259 QEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 318
QEI E GIPSYWIDSE RIGPGN+I+YKL HGEL+E ENWLP+G ITIG+TSGASTPDK
Sbjct: 121 QEIGELSGIPSYWIDSEVRIGPGNRISYKLNHGELIEAENWLPQGPITIGVTSGASTPDK 180
Query: 319 AVEDVLKKVFEIKREEALQLA 339
VED L +VFEIKR+E LQ+A
Sbjct: 181 VVEDALHRVFEIKRQELLQVA 201
>gi|323452308|gb|EGB08182.1| hypothetical protein AURANDRAFT_26431 [Aureococcus anophagefferens]
Length = 400
Score = 327 bits (839), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 165/334 (49%), Positives = 236/334 (70%), Gaps = 11/334 (3%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNI-PVEEGKKQFDVVNKGDVVVLP 62
IA A ++F ++++ ITNE++HNP VNK LE+ V I +G K+FD V +GDVV+LP
Sbjct: 49 IALAATEKFGDKQLHITNELLHNPGVNKMLEDEGVSFIEKTGDGGKRFDDVKEGDVVILP 108
Query: 63 AFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATAS 122
AFGA + EM ++ V VDTTCPWV+KVW V+K + T+IIHGKY+HEE +ATAS
Sbjct: 109 AFGATLAEMQHFSDMGVTTVDTTCPWVTKVWNVVDKQVQRSMTTIIHGKYAHEEAIATAS 168
Query: 123 FAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIA 182
Y++VKN+ EAEYVC+Y+ LN + +E L KF KA+SKGFDPDV L K+GIA
Sbjct: 169 MCDDYLMVKNIDEAEYVCNYM----LNPTPEGREDLLHKFAKAMSKGFDPDVHLEKIGIA 224
Query: 183 NQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEK-- 240
NQTTM K ET+ +G+L E+ +++K+ E + F++F+TIC ATQERQDA+++MV+++
Sbjct: 225 NQTTMYKKETQAVGRLFEQVILKKYPDEAAD-RFVAFDTICSATQERQDAIHEMVDDESV 283
Query: 241 --VDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKEN 298
+D ILVVGG++SSNT+HL EI + GIP + I+ I N ++++L+ GE+ +EN
Sbjct: 284 KDLDFILVVGGFDSSNTAHLVEIPYEAGIPVFHINEADCISETNAVSHRLVSGEMAVEEN 343
Query: 299 WLPKGQ-ITIGITSGASTPDKAVEDVLKKVFEIK 331
WLP + IG+TSGASTPD V++ L+++ +K
Sbjct: 344 WLPTDRPARIGVTSGASTPDAYVQEALERLVLLK 377
>gi|45737903|gb|AAS75818.1| isopentenyl/dimethylallyl diphosphate synthase [Nicotiana
benthamiana]
Length = 166
Score = 313 bits (802), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 143/166 (86%), Positives = 161/166 (96%)
Query: 130 VKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLK 189
VKNM EA YVCDYILGG+L+GSSSTKEAF++KFK AVSKGFDPDVDLVK GIANQTTMLK
Sbjct: 1 VKNMAEATYVCDYILGGKLDGSSSTKEAFMQKFKNAVSKGFDPDVDLVKTGIANQTTMLK 60
Query: 190 GETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGG 249
GETEEIGKLVE+TMM+++GVEN+N HFISFNTICDATQERQDAMYK+V+EK+DL+LVVGG
Sbjct: 61 GETEEIGKLVERTMMQRYGVENINNHFISFNTICDATQERQDAMYKLVDEKLDLMLVVGG 120
Query: 250 WNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVE 295
WNSSNTSHLQEIAE+RGIPSYWIDSE+RIGPGN+I+YKL+HGELVE
Sbjct: 121 WNSSNTSHLQEIAEERGIPSYWIDSEQRIGPGNRISYKLLHGELVE 166
>gi|189220130|ref|YP_001940770.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Methylacidiphilum infernorum V4]
gi|189186988|gb|ACD84173.1| 4-Hydroxy-3-methylbut-2-enyl diphosphate reductase IspH
[Methylacidiphilum infernorum V4]
Length = 419
Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 161/336 (47%), Positives = 227/336 (67%), Gaps = 15/336 (4%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AY K FP ++I++ EIIHNP VN +L M ++ + EG D + DVV++PA
Sbjct: 71 LAYATTKVFPTKRIFLLGEIIHNPEVNDQLTAMGIKRLQAVEGGYFLDGLTADDVVIIPA 130
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA VE M + QIVDTTC V VW V +++K TSIIHGK HEET ATAS
Sbjct: 131 FGAEVETMKRIQQIGCQIVDTTCGDVMTVWKRVRQYRKEGATSIIHGKAWHEETKATASR 190
Query: 124 A------GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLV 177
A G Y++V N++E +YVC+YI G K+ FLEKFK AVS GFDPDV L
Sbjct: 191 AIGEDGNGHYLVVYNLEETDYVCNYIRYG------GDKKEFLEKFKGAVSPGFDPDVHLC 244
Query: 178 KVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMV 237
VG+ANQTTM++GETEE+ + + K + ++G EN++EHF F+TIC ATQERQDA+ M+
Sbjct: 245 HVGVANQTTMMRGETEEVQRRICKAIEDRYGKENLHEHFRFFDTICGATQERQDALLDML 304
Query: 238 E-EKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMH-GELVE 295
+ EK+DL++VVGG+NSSNTSHL EI E R +P+Y+I + +++ +I + +H G+ V
Sbjct: 305 DKEKLDLLIVVGGYNSSNTSHLAEIGESR-LPTYFIKNAEKLISTRQIQHWDLHKGQEVI 363
Query: 296 KENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIK 331
E WL +G+I +GIT+GAS P+ +E+ ++++FE++
Sbjct: 364 TEGWLKEGEINVGITAGASCPNNLIEETIQRLFELR 399
>gi|384917079|ref|ZP_10017212.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Methylacidiphilum fumariolicum SolV]
gi|384525529|emb|CCG93085.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Methylacidiphilum fumariolicum SolV]
Length = 411
Score = 310 bits (793), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 159/337 (47%), Positives = 227/337 (67%), Gaps = 17/337 (5%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AY K FP ++I++ EIIHNP VN +L M ++ + +G+ D + DVV++PA
Sbjct: 71 LAYATTKVFPTKRIYLLGEIIHNPEVNDQLTAMGIKRLQAVQGRYSLDGLTADDVVIIPA 130
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA VE M + QIVDTTC V VW V +++ TSIIHGK HEET ATAS
Sbjct: 131 FGAEVETMKRIQQIGCQIVDTTCGDVMTVWKRVRQYRNEGATSIIHGKAWHEETKATASR 190
Query: 124 A------GKYIIVKNMKEAEYVCDYI-LGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDL 176
A G+Y++V N++E +YVC+YI GG+ K+ FL+KFK AVS GFDPD+ L
Sbjct: 191 AIGEDGNGQYLVVYNLEETDYVCNYIRYGGD-------KQEFLQKFKGAVSPGFDPDIHL 243
Query: 177 VKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKM 236
VG+ANQTTM++GETEE+ + + K + ++G EN+++HF F+TIC ATQERQDA+ M
Sbjct: 244 RHVGVANQTTMMRGETEEVQRRICKAIEDRYGKENLHKHFRFFDTICGATQERQDALLDM 303
Query: 237 VE-EKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWI-DSEKRIGPGNKIAYKLMHGELV 294
++ EK+DL++VVGG+NSSNTSHL EI E R +P+Y+I ++EK I + L G V
Sbjct: 304 LDREKLDLLIVVGGYNSSNTSHLAEIGEGR-LPTYFIKNAEKLISSQQIRHWNLHEGREV 362
Query: 295 EKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIK 331
E WL +G+I +GIT+GAS P+ +E+ ++++FE++
Sbjct: 363 ITEGWLGEGEINVGITAGASCPNNLIEETIQRLFELR 399
>gi|223936626|ref|ZP_03628537.1| hydroxymethylbutenyl pyrophosphate reductase [bacterium Ellin514]
gi|223894790|gb|EEF61240.1| hydroxymethylbutenyl pyrophosphate reductase [bacterium Ellin514]
Length = 407
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 150/333 (45%), Positives = 216/333 (64%), Gaps = 12/333 (3%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AY ARK FP + I+I EIIHNP VN ++ M ++++ +E D + K D+V++PA
Sbjct: 71 LAYAARKVFPNQPIYILGEIIHNPEVNDQIRAMGIKSLSGKEKDADVDDLKKDDIVIIPA 130
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATAS- 122
FG V L K + VDTTC V VW V ++ TSIIHGK HEET AT+S
Sbjct: 131 FGTEVATREKLQAKGCRFVDTTCGDVMSVWKRVRQYSNDRVTSIIHGKAWHEETKATSSQ 190
Query: 123 ---FAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKV 179
G Y++V + E +YVC++IL G +KE FL KFK A S+GFDPDV L +
Sbjct: 191 TTNRGGHYLVVFTLAETDYVCNFILKG------GSKEEFLNKFKGAYSEGFDPDVHLQAI 244
Query: 180 GIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEE 239
G+ANQTTML+GETEE+ + + M K+G + V +HF F+TIC ATQ+RQDA+ K++
Sbjct: 245 GVANQTTMLRGETEEVQRRLRNAMTEKYGTDKVEQHFRFFDTICGATQDRQDALEKLLRV 304
Query: 240 KVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMH-GELVEKEN 298
++L+LV+GG+NSSNTSHL E+ E + +P+Y+I + ++ I + H G+ VE +
Sbjct: 305 PINLLLVIGGYNSSNTSHLAEMGEAK-LPTYFIKNAAKMVSDKVIFHYNQHIGKEVETSD 363
Query: 299 WLPKGQITIGITSGASTPDKAVEDVLKKVFEIK 331
WLP G IT+GIT+GAS P+ +ED ++++FE++
Sbjct: 364 WLPSGNITVGITAGASCPNNLIEDTIRRLFELR 396
>gi|347755996|ref|YP_004863559.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Candidatus Chloracidobacterium thermophilum B]
gi|347588513|gb|AEP13042.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and
DMAPP forming) [Candidatus Chloracidobacterium
thermophilum B]
Length = 401
Score = 294 bits (752), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 147/333 (44%), Positives = 216/333 (64%), Gaps = 19/333 (5%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYE +FP ++++T EIIHNPTVN++L M + + D V D+V++PA
Sbjct: 78 LAYETHVRFPNRRVYLTGEIIHNPTVNEQLARMGYCFL------RPGDEVTADDIVLIPA 131
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA E+ L +VDTTC V VW VEK+ + +T+IIHGKY HEET AT S
Sbjct: 132 FGAPTHELERLKRIGCLLVDTTCGSVVHVWKRVEKYAREGFTAIIHGKYDHEETEATRSR 191
Query: 124 A-----GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVK 178
GK+++V++ +A+ VCDYILG ++EAFL ++ + GFDPD DL +
Sbjct: 192 TTLYPNGKFLVVRDRVQAQDVCDYILG------RGSREAFLARYAAVATPGFDPDRDLQR 245
Query: 179 VGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVE 238
VG+ANQTTML E+ EI +++ + + +++G E V F SF+TIC ATQERQDA+ K++E
Sbjct: 246 VGLANQTTMLSSESLEIAEMIRRAIEQRYGPEEVKTRFRSFDTICSATQERQDAILKLIE 305
Query: 239 EKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYK-LMHGELVEKE 297
E +DL++VVGG+NSSNT HL EIA +R +P+Y I++ + + +I +K E
Sbjct: 306 EPLDLVIVVGGYNSSNTEHLCEIAAER-LPTYHINAPECLVSAREIRHKPAFSKEETTSW 364
Query: 298 NWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 330
+WLP+G +TIGIT+GASTP+K V D ++++ +
Sbjct: 365 DWLPEGPVTIGITAGASTPNKVVGDCIERIVAL 397
>gi|196231723|ref|ZP_03130580.1| hydroxymethylbutenyl pyrophosphate reductase [Chthoniobacter flavus
Ellin428]
gi|196224195|gb|EDY18708.1| hydroxymethylbutenyl pyrophosphate reductase [Chthoniobacter flavus
Ellin428]
Length = 412
Score = 292 bits (748), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 146/341 (42%), Positives = 221/341 (64%), Gaps = 13/341 (3%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AY A K F + +++I EIIHNP VN+++ + ++N+ ++ + + + DVV++PA
Sbjct: 71 LAYAAAKVFQDRRLFILGEIIHNPEVNEQIVALGIKNLLGKDKEAEVQDLRGDDVVIVPA 130
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FG V + + QIVDTTC V VW V ++ D TSIIHGK SHEET ATAS
Sbjct: 131 FGTDVGTLARIKELGCQIVDTTCGDVMSVWKRVRQNASDDVTSIIHGKASHEETKATASR 190
Query: 124 A-----GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVK 178
A G Y++V + + +YVC+YI G K AFLEKF+ A S+GFDPD L +
Sbjct: 191 AVVSGKGHYLVVLTLADTDYVCNYIRHG------GDKAAFLEKFRGAFSEGFDPDRHLRR 244
Query: 179 VGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVE 238
VG+ANQTTM++GETEE+ + +E + + G E ++F F+TIC ATQERQDA+ +M++
Sbjct: 245 VGVANQTTMMRGETEEVQRRIEAAVRDRDGAEPAKQNFRFFDTICGATQERQDALKEMLD 304
Query: 239 EKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG-ELVEKE 297
++DL+LV+GG+NSSNTSHL E+ E + +P+Y+I + R+ +I + H + + E
Sbjct: 305 SRMDLLLVIGGYNSSNTSHLAEMGEAK-LPTYFIRNAGRLESRQRIVHFDQHAKQEIATE 363
Query: 298 NWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEALQL 338
NWLP+ +TIG+T+GAS P+ +E+ + +++E+ A QL
Sbjct: 364 NWLPERPVTIGLTAGASCPNNLIEETILRIYELHGISAQQL 404
>gi|226228164|ref|YP_002762270.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Gemmatimonas
aurantiaca T-27]
gi|226091355|dbj|BAH39800.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Gemmatimonas
aurantiaca T-27]
Length = 437
Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 152/341 (44%), Positives = 217/341 (63%), Gaps = 17/341 (4%)
Query: 5 AYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDV--VNKGDVVVLP 62
AY+ R++FPE +I++ EIIHNP VN +L+EM V I + K FD V DVV+LP
Sbjct: 92 AYQTRRKFPERRIFLAGEIIHNPHVNAKLQEMGV--IFLSAKGKGFDYAPVEPKDVVILP 149
Query: 63 AFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATAS 122
AFG +++ TL +VDTTC V VW VE + + +TS+IHGKY HEET ATAS
Sbjct: 150 AFGVTIQDFQTLRELGCVVVDTTCGSVLNVWKRVEAYARDGFTSLIHGKYYHEETRATAS 209
Query: 123 -----FAGKYIIVKNMKEAEYVCDYI---LGGELNGSSSTKEAFLEKFKKAVSKGFDPDV 174
G+Y++V++M EAE V DY+ G + ++EAFLE+F KA S GFDPDV
Sbjct: 210 QVEKYNGGQYLVVRDMAEAELVMDYLEDRAGVQPAREPLSREAFLERFAKAASDGFDPDV 269
Query: 175 DLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMY 234
L +VG+ANQTTML E+ IG V ++M R +G + EHF +F+TIC ATQ+RQDA+
Sbjct: 270 HLERVGVANQTTMLARESLAIGAAVGESMTRGYGEAHRAEHFRTFDTICSATQDRQDAVM 329
Query: 235 KMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPG-NKIAYKLMHGEL 293
+++ + +DL++VVGG+NSSNT L + ++ +P+Y I I N++ Y+ + +
Sbjct: 330 ELLRDPLDLMVVVGGYNSSNTISLAALCAEQ-VPTYHIADPDEIDVAENRVRYRRIGAKH 388
Query: 294 VEKE--NWLP-KGQITIGITSGASTPDKAVEDVLKKVFEIK 331
E E +WLP G + IGIT+GASTP+ + + +VF I+
Sbjct: 389 HEDEMSSWLPTTGPLRIGITAGASTPNNKIGQAVARVFAIR 429
>gi|171914430|ref|ZP_02929900.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Verrucomicrobium spinosum DSM 4136]
Length = 430
Score = 278 bits (711), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 141/338 (41%), Positives = 220/338 (65%), Gaps = 18/338 (5%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AY AR+ F + ++++ EIIHNP VN++L EM + +IP+ + + + DVV++PA
Sbjct: 79 LAYAARRVFADRRVFLLGEIIHNPEVNRQLTEMGIVSIPISQHLEAVSKLGPEDVVIVPA 138
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA + M ++ + +VDTTC V VW V + K +TSIIHGK SHEET AT+S
Sbjct: 139 FGAETQLMNIISERGCLVVDTTCGDVMSVWKRVRGYAKQGFTSIIHGKASHEETRATSSR 198
Query: 124 A------GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLV 177
A G +++V + + +YVCDYI G +E FL++F+ A+S GFDPD L
Sbjct: 199 AQGDDGKGNFVVVLTLGDVDYVCDYIRHG------GNREEFLKRFEGAMSPGFDPDQHLK 252
Query: 178 KVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMV 237
+VG+ANQTTMLK ETEE+ + V++ ++ + G E ++F F+TIC ATQERQD++++M+
Sbjct: 253 RVGVANQTTMLKSETEELQRRVQQAVIDRDGPEPAQQNFQVFDTICGATQERQDSLFEML 312
Query: 238 EEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEK- 296
+ +D++LVVGG+NSSNT+HL EI E + +P+++I + + + +I + +H + EK
Sbjct: 313 RKPLDILLVVGGYNSSNTTHLVEIGE-KELPTFFIRTAELLKSFTEIVHFDLHLK-AEKT 370
Query: 297 ---ENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIK 331
E K I +GIT+GAS P+ +ED + +VFE++
Sbjct: 371 SYSEKLASKEPIVVGITAGASCPNNLIEDTILRVFELR 408
>gi|108805030|ref|YP_644967.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Rubrobacter
xylanophilus DSM 9941]
gi|108766273|gb|ABG05155.1| hydroxymethylbutenyl pyrophosphate reductase [Rubrobacter
xylanophilus DSM 9941]
Length = 410
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 150/349 (42%), Positives = 229/349 (65%), Gaps = 24/349 (6%)
Query: 5 AYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVE-EGK--KQFDVVNKGDVVVL 61
A++ R++FP+ +I++T ++IHN ++N RL EM ++ + +G+ ++F+ +++ DVV+L
Sbjct: 66 AFQTREKFPDRRIFLTGDMIHNASMNARLREMGIEFLSQGFDGRPDERFEDLDEEDVVIL 125
Query: 62 PAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATA 121
PAFGA VE + L + IVDTTC V VW V ++ + +TSIIHGKY HEET ATA
Sbjct: 126 PAFGAPVEWVGKLRERGCIIVDTTCGSVLSVWKRVARYAQKGFTSIIHGKYYHEETRATA 185
Query: 122 SFA------GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVD 175
S GKY+IV+++KE Y+ D+I G +S E E+ +S GFDP+ D
Sbjct: 186 SQTRREGGNGKYLIVRDLKETGYLTDFI-----RGRTSAGE-LKERLGHGMSPGFDPERD 239
Query: 176 LVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYK 235
LV+VG+ANQTTML ET ++G+ + K M ++G EN+ EHF F+TIC ATQ+RQDA+ +
Sbjct: 240 LVRVGVANQTTMLMTETMKVGEEIRKAMEERYGRENLAEHFELFDTICSATQDRQDALMR 299
Query: 236 MVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYK-----LMH 290
++E +D++++VGG+NSSNT++L IA R SY I + + I G I +K L
Sbjct: 300 LLEHPLDVVVIVGGYNSSNTNNLAIIAAGRVPRSYHIANGECI-RGASIRHKPPGTPLDP 358
Query: 291 GELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE---IKREEAL 336
E VE+E WLP+G + +G+T+GASTP+ + ++++ E I+ EEAL
Sbjct: 359 REEVEEEGWLPEGPVRVGLTAGASTPNSQIGLAVRRILEARGIRVEEAL 407
>gi|187736135|ref|YP_001878247.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Akkermansia
muciniphila ATCC BAA-835]
gi|187426187|gb|ACD05466.1| hydroxymethylbutenyl pyrophosphate reductase [Akkermansia
muciniphila ATCC BAA-835]
Length = 399
Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 218/340 (64%), Gaps = 21/340 (6%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAY AR+ FP+ +I++ +IIHNP VN++LEEM ++ +P ++ +D V DVV++PA
Sbjct: 70 IAYAARRVFPDRRIFLIGDIIHNPEVNRQLEEMGIRKLPWKQLDSSYDRVAPDDVVIIPA 129
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FG M L K VQIVDTTC V KVW V+ + TSIIHGK +HEET ATAS
Sbjct: 130 FGVPTPFMDALEEKGVQIVDTTCGDVMKVWKRVKNYAAMGITSIIHGKATHEETSATASR 189
Query: 124 A------GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLV 177
A GKY++V ++++A +CDYI+G +EAFL++F+ S GFDPD DL
Sbjct: 190 ALGERGRGKYLVVYDLEDARILCDYIMG------RGDREAFLKRFEGCCSPGFDPDRDLE 243
Query: 178 KVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMV 237
+VGIANQTTMLK ET+ + K+V+ ++++ G + ++F F+TIC ATQ+RQDA+Y+++
Sbjct: 244 EVGIANQTTMLKTETQTLQKMVKDAIVQRDGDD---DNFYVFDTICGATQDRQDALYELL 300
Query: 238 EEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKE 297
+ +D++ VVGG+NSSNT+HL +IA + +P+Y+I+S + I + V +
Sbjct: 301 KNPLDVMFVVGGYNSSNTTHLVDIAREH-VPTYFIESAECIKSIQYVDAFDTKTREVRRM 359
Query: 298 NWLPKGQ-----ITIGITSGASTPDKAVEDVLKKVFEIKR 332
P Q + +GIT+GAS P +E + ++ ++++
Sbjct: 360 TTEPVVQNLGKSLKVGITAGASCPANLIEATILRIADLRK 399
>gi|347755465|ref|YP_004863029.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Candidatus Chloracidobacterium thermophilum B]
gi|347587983|gb|AEP12513.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and
DMAPP forming) [Candidatus Chloracidobacterium
thermophilum B]
Length = 408
Score = 256 bits (654), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 136/337 (40%), Positives = 202/337 (59%), Gaps = 21/337 (6%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AYEAR++F + KI++ EIIHNP VN +L + +Q + +G + DVV++PA
Sbjct: 73 LAYEARRRFHDRKIYLAGEIIHNPMVNGQLAAVGIQPL---DGLAH---LTPQDVVIIPA 126
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATAS- 122
FG E+ L ++DTTC V VW VE++ + +T++IHGKY HEET AT S
Sbjct: 127 FGLPTPELSRLRQTGCTLIDTTCGSVVHVWKRVERYARDGFTTVIHGKYDHEETAATRSQ 186
Query: 123 ----FAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVK 178
G+Y++V+++ EAE + D I G + + + F + S GFDP DL K
Sbjct: 187 VLAIPGGRYVVVRDLSEAERLADVISGLQ------PVDMLHDFFARFASPGFDPRRDLEK 240
Query: 179 VGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVE 238
+G+ANQTTML E+ I + + M ++G + V F SF+TIC ATQ RQDA+ +++
Sbjct: 241 IGLANQTTMLASESLAIAERLRAAMTVRYGEDEVPFRFRSFDTICSATQVRQDAVAQLLA 300
Query: 239 EKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYK--LMHGELVEK 296
DL+LVVGG+NSSNT HL E+A P+Y I + +I +K GE VE
Sbjct: 301 YGPDLMLVVGGYNSSNTGHLCEMAAAV-CPTYHITGADCLVSAERIRHKPAFQTGE-VES 358
Query: 297 ENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKRE 333
+WLP G++TIG+TSGASTPD+ + +V+ ++ ++ E
Sbjct: 359 HHWLPAGKLTIGLTSGASTPDRILGEVIVRLIDVAGE 395
>gi|68271953|gb|AAY89245.1| putative penicillin tolerance protein [uncultured bacterium
BAC-L1N9]
Length = 402
Score = 254 bits (648), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 134/337 (39%), Positives = 196/337 (58%), Gaps = 21/337 (6%)
Query: 5 AYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV-EEGKKQFDVVNKGDVVVLPA 63
AYE R +FP +++++ EIIHNP VN +L M + + +G+ ++ DVV+LPA
Sbjct: 65 AYETRTKFPGKRVFLVGEIIHNPHVNAKLAAMGIIELGQGPDGRFDLSMLTAEDVVILPA 124
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATAS- 122
FG V + L +VDTTC V VW VE + + +T++IHGKY HEET ATAS
Sbjct: 125 FGVTVADFERLRALGSVLVDTTCGSVLNVWKRVESYARDGFTALIHGKYYHEETRATASQ 184
Query: 123 ----FAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVK 178
G++++V NM EA VCD+I G S F A+S GFD DL +
Sbjct: 185 VTKHAGGRFLVVLNMDEARLVCDFIEG------SGDAAQLAAHFSAAMSPGFDFTRDLER 238
Query: 179 VGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVE 238
+G+ANQTTML GE+ I + K+ +R+ G + V HF +F+TIC ATQERQDA+ +++E
Sbjct: 239 IGVANQTTMLSGESLAIAHEIRKSFVRRHGEDTVAAHFRTFDTICSATQERQDAVIQLLE 298
Query: 239 EKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEK-- 296
+DL++VVGG+NSSNT+HL + DRG+ +Y I+ + + L H V+
Sbjct: 299 NPMDLMIVVGGYNSSNTTHLAALCRDRGVTAYHIEDASAVDIETGM---LRHQPRVKAPE 355
Query: 297 ---ENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 330
WL TIGIT+GASTP+ + + + ++ +
Sbjct: 356 ATVSGWLDNVH-TIGITAGASTPNNKIGETILRICAV 391
>gi|21435739|gb|AAM53956.1|AF514843_1 LYTB-like protein [Forsythia x intermedia]
Length = 130
Score = 247 bits (630), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 112/130 (86%), Positives = 126/130 (96%)
Query: 183 NQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVD 242
NQTTMLKGETE+IGKLVE+ +MRK+GVEN+N HFISFNTICDATQERQDAMYK+V++ +D
Sbjct: 1 NQTTMLKGETEDIGKLVERILMRKYGVENINNHFISFNTICDATQERQDAMYKLVDQHMD 60
Query: 243 LILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPK 302
L+LVVGGWNSSNTSHLQEIAE RGIPSYWIDSEKRIGPGNKI+YKLMHGELVEKENWLP+
Sbjct: 61 LMLVVGGWNSSNTSHLQEIAEARGIPSYWIDSEKRIGPGNKISYKLMHGELVEKENWLPE 120
Query: 303 GQITIGITSG 312
G+ITIG+TSG
Sbjct: 121 GRITIGVTSG 130
>gi|268316278|ref|YP_003289997.1| hydroxymethylbutenyl pyrophosphate reductase [Rhodothermus marinus
DSM 4252]
gi|262333812|gb|ACY47609.1| hydroxymethylbutenyl pyrophosphate reductase [Rhodothermus marinus
DSM 4252]
Length = 411
Score = 244 bits (623), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 133/335 (39%), Positives = 207/335 (61%), Gaps = 17/335 (5%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKK--QFDVVNKGDVVVL 61
IAY A ++ P +I++ +E+IHNP VN+ LE+ V+ + G++ FDV+ D+V++
Sbjct: 63 IAYRALEENPGRRIFLLSEMIHNPHVNRDLEQRGVRFLRTTRGEQLIPFDVLRPDDIVII 122
Query: 62 PAFGAAVEEMVTLNNKNVQI--VDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVA 119
PAFG E L + V + DTTCP+V KVW + + YT +IHGK HEET A
Sbjct: 123 PAFGTTPEIEAELAARGVDVRRYDTTCPFVEKVWKRSSQLGQRGYTIVIHGKRYHEETRA 182
Query: 120 TASFAGK---YIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDL 176
T + A + ++V++++EA + ++ GE + + F E+F S+GFDP+ DL
Sbjct: 183 TFARAAREAPVVVVRDLEEAADLAR-VIRGEADAAF-----FYERFHDRYSEGFDPERDL 236
Query: 177 VKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFI-SFNTICDATQERQDAMYK 235
V++G+ NQTTML ET+ I +L+ + M+ ++G EN++EHF + +T+C AT E Q A
Sbjct: 237 VRIGVVNQTTMLATETQAIAELLRQAMIDRYGPENLHEHFADTSDTLCYATHENQQATRA 296
Query: 236 MVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWID-SEKRIGPGNKIAYKLMHGELV 294
+++ DL LVVGG+NSSNTSHL E+ +R +P+Y++ E+ + P Y L G +
Sbjct: 297 LIDSGGDLALVVGGYNSSNTSHLVELCAER-MPTYFVKGPEELLSPARIRHYDLELGAVR 355
Query: 295 EKENWLPKGQ-ITIGITSGASTPDKAVEDVLKKVF 328
E ENWLP + + I +T+GAS PD +E VL++V
Sbjct: 356 ETENWLPAHRPVEIVLTAGASCPDALLEAVLQRVL 390
>gi|294944831|ref|XP_002784452.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, putative
[Perkinsus marinus ATCC 50983]
gi|239897486|gb|EER16248.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, putative
[Perkinsus marinus ATCC 50983]
Length = 429
Score = 244 bits (623), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 140/265 (52%), Positives = 178/265 (67%), Gaps = 33/265 (12%)
Query: 92 VWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGS 151
VW+SVE+HKKG+YTSIIHGK HEET+AT+SFA KY+I+KN+K+AEYVC ++L
Sbjct: 164 VWSSVERHKKGEYTSIIHGKSKHEETIATSSFADKYLILKNLKDAEYVCKFLL------- 216
Query: 152 SSTKEA----FLEKFKK-AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRK 206
S KE F EKF S GFDP DL KVG+ANQTTMLKGET I KL EKT+++
Sbjct: 217 SKNKERLVNDFFEKFPADRHSVGFDPLKDLEKVGVANQTTMLKGETALIAKLFEKTVLQL 276
Query: 207 FGVENVNEHFISFNTICDATQERQDAMYKMVEE---KVDLILVVGGWNSSNTSHLQEIAE 263
+G E +NEHF++FNTICDATQ+RQDA+YK+V K+D++LVVGG+NSSNT HLQEI+
Sbjct: 277 YGPEGLNEHFVAFNTICDATQDRQDALYKLVTPTATKLDMMLVVGGFNSSNTEHLQEISV 336
Query: 264 DRG----IPSYWIDSEKRIGP-GNKIAYKLM----------HGELVEKENWLPKG--QIT 306
+ G ++ ID RI N I +K + HG L ++LP IT
Sbjct: 337 EAGGVKDHRAFHIDGPARIDELRNTITHKPVETPPIEAARNHG-LAVTHDFLPGNGEHIT 395
Query: 307 IGITSGASTPDKAVEDVLKKVFEIK 331
IG+TSGASTPD +E L+K+ K
Sbjct: 396 IGVTSGASTPDDVLEQSLQKLLRTK 420
>gi|345304007|ref|YP_004825909.1| hydroxymethylbutenyl pyrophosphate reductase [Rhodothermus marinus
SG0.5JP17-172]
gi|345113240|gb|AEN74072.1| hydroxymethylbutenyl pyrophosphate reductase [Rhodothermus marinus
SG0.5JP17-172]
Length = 411
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/335 (39%), Positives = 207/335 (61%), Gaps = 17/335 (5%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKK--QFDVVNKGDVVVL 61
IAY A ++ P +I++ +E+IHNP VN+ LE+ V+ + G++ FDV+ D+V++
Sbjct: 63 IAYRALEENPGRRIFLLSEMIHNPHVNRDLEQRGVRFLRTTRGEQLIPFDVLRPDDIVII 122
Query: 62 PAFGAAVEEMVTLNNKNVQI--VDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVA 119
PAFG E L + V + DTTCP+V KVW + + YT +IHGK HEET A
Sbjct: 123 PAFGTTPEIEAELAARGVDVRRYDTTCPFVEKVWKRSSQLGQRGYTIVIHGKRYHEETRA 182
Query: 120 TASFAGK---YIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDL 176
T + A + ++V++++EA + ++ GE + + F E+F S+GFDP+ DL
Sbjct: 183 TFARAAREAPVVVVRDLEEAADLAR-VIRGEADAAF-----FYERFHDRYSEGFDPERDL 236
Query: 177 VKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFI-SFNTICDATQERQDAMYK 235
V++G+ NQTTML ET+ I +L+ + M+ ++G EN++EHF + +T+C AT E Q A
Sbjct: 237 VRIGVVNQTTMLATETQAIAELLRQAMIDRYGPENLHEHFADTSDTLCYATHENQQATRA 296
Query: 236 MVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWID-SEKRIGPGNKIAYKLMHGELV 294
+++ DL LVVGG+NSSNTSHL E+ +R +P+Y++ E+ + P Y L G +
Sbjct: 297 LIDSGGDLALVVGGYNSSNTSHLVELCAER-MPTYFVKGPEELLSPTRIRHYDLALGAVR 355
Query: 295 EKENWLPKGQ-ITIGITSGASTPDKAVEDVLKKVF 328
E E+WLP + + I +T+GAS PD +E VL++V
Sbjct: 356 ETESWLPAHRPVEIVLTAGASCPDALLEAVLQRVL 390
>gi|255037295|ref|YP_003087916.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Dyadobacter
fermentans DSM 18053]
gi|254950051|gb|ACT94751.1| hydroxymethylbutenyl pyrophosphate reductase [Dyadobacter
fermentans DSM 18053]
Length = 407
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 131/337 (38%), Positives = 201/337 (59%), Gaps = 19/337 (5%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQ--FDVVNKGDVVVL 61
IAY+A + P ++I++ +E+IHNP VN+ L E VQ I +G + +D + D+V++
Sbjct: 62 IAYKAIAENPGKRIFLLSEMIHNPDVNRDLVERGVQFIMDTKGNQLIGWDQLTAEDIVIV 121
Query: 62 PAFGAAVEEMVTLNNK--NVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVA 119
PAFG VE L+ N + DTTCP+V KVW + + DYT ++HGK +HEET A
Sbjct: 122 PAFGTTVENQAKLSELGVNAYVYDTTCPFVEKVWNRAAQIGEKDYTIVVHGKPNHEETRA 181
Query: 120 TASFA---GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDL 176
T S + ++V+NMK+A+ + +Y+ G L F E FK S+GFDP+ DL
Sbjct: 182 TFSHSKENAPTVVVENMKQAQILAEYMTGIRLAAQ------FFEDFKNQYSEGFDPEKDL 235
Query: 177 VKVGIANQTTMLKGETEEIGKLVEKTMMRKFGV--ENVNEHFI-SFNTICDATQERQDAM 233
++G+ NQTTML +T+ I ++ M+R + + E V + F + +T+C AT + QDA
Sbjct: 236 QRIGVVNQTTMLASDTQGIADYLKNVMIRHYSLRPEQVEDRFANTRDTLCYATNDNQDAT 295
Query: 234 YKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMH-GE 292
Y ++ DL++V GG+NSSNT+HL E+ E R P+Y+I+S +I I + +H E
Sbjct: 296 YALLTHDADLVVVAGGYNSSNTTHLVELCE-RKFPTYFIESVNKILDRQLIRHFDLHKKE 354
Query: 293 LVEKENWLP-KGQITIGITSGASTPDKAVEDVLKKVF 328
V EN++P K + I +T GAS PD VE +L ++
Sbjct: 355 EVVTENYIPDKTPVRIMLTCGASCPDAVVEGILVRLL 391
>gi|385808992|ref|YP_005845388.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ignavibacterium
album JCM 16511]
gi|383801040|gb|AFH48120.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ignavibacterium
album JCM 16511]
Length = 407
Score = 227 bits (579), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 131/334 (39%), Positives = 207/334 (61%), Gaps = 17/334 (5%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFD--VVNKGDVVVL 61
IAY+ ++ P+++I++ +E+IHNP VN L+++ V+ + G D + K D+V++
Sbjct: 62 IAYKTIEENPDKRIFLLSEMIHNPGVNLDLQKLGVKFLMDTAGNHLIDWSELTKDDIVII 121
Query: 62 PAFGAAVEEMVTLNNKNVQIV--DTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVA 119
PAFG +E LN + +TTCP+V KVW E+ K +YT IIHGK+ HEET A
Sbjct: 122 PAFGTTLEIEQKLNELGIDPYRYNTTCPFVEKVWNRSEQLGKQNYTVIIHGKHYHEETRA 181
Query: 120 TASFA---GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDL 176
T S + +IV+++ EA+ + +IL E F + F S+ F+ DL
Sbjct: 182 TFSHSKTNAPSVIVRDINEAKILASFIL------DEKPSEEFYKIFAGKYSENFNVKKDL 235
Query: 177 VKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFI-SFNTICDATQERQDAMYK 235
+VG+ NQTTML ET+EI L++ TM++K+G EN+ +HF + +T+C AT + Q+A Y
Sbjct: 236 ARVGVVNQTTMLATETQEIADLLKSTMVKKYGSENLKDHFADTRDTLCYATNDNQEATYA 295
Query: 236 MVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVE 295
+++E D +VVGG+NSSNTSH+ E+ E++ +P+Y+I SE++I +I + +H +
Sbjct: 296 LLKEPADFAIVVGGYNSSNTSHIVELCEEK-LPTYFISSEEKIISSTQIKHFDIHSHQEK 354
Query: 296 KEN-WLP-KGQITIGITSGASTPDKAVEDVLKKV 327
N ++P K ++ I +TSGAS PD VE VL+KV
Sbjct: 355 ITNDFIPAKDKVDIILTSGASCPDAVVEAVLRKV 388
>gi|338211698|ref|YP_004655751.1| hydroxymethylbutenyl pyrophosphate reductase [Runella slithyformis
DSM 19594]
gi|336305517|gb|AEI48619.1| hydroxymethylbutenyl pyrophosphate reductase [Runella slithyformis
DSM 19594]
Length = 408
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 129/337 (38%), Positives = 204/337 (60%), Gaps = 19/337 (5%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKK--QFDVVNKGDVVVL 61
IAY+A + P ++I++ +E+IHNP VN+ L E V+ + G++ ++ + D+V++
Sbjct: 62 IAYKAIAENPGKRIFLLSEMIHNPDVNRDLLERGVRFLMETTGRQIIPWEELRPADIVIV 121
Query: 62 PAFGAAVE--EMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVA 119
PAFG VE +TL + DTTCP+V KVW + + +YT ++HGK HEET A
Sbjct: 122 PAFGTTVEIQNRLTLLGIDAYQYDTTCPFVEKVWNRASQIGQKNYTIVVHGKPLHEETRA 181
Query: 120 TASFA---GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDL 176
T S + I+VKNMK+ E + YI G TKE F E+F+ S GFDP+ DL
Sbjct: 182 TFSHSKENAPTIVVKNMKQTERLARYITG------EGTKEEFYEEFRGQYSVGFDPEQDL 235
Query: 177 VKVGIANQTTMLKGETEEIGKLVEKTMMRKFGV--ENVNEHFI-SFNTICDATQERQDAM 233
++G+ NQTTML +T+ I ++ M + + + + V E F + +T+C AT + QDA
Sbjct: 236 QRIGVVNQTTMLASDTQGIADYLKGVMAQHYQLSPQEVEERFANTRDTLCYATNDNQDAT 295
Query: 234 YKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGEL 293
Y +++ D +LV GG+NSSNTSH+ E+ E + +P+Y+I+S+ +I + I + +H +
Sbjct: 296 YALLQYDADFVLVAGGYNSSNTSHIVELCEQK-LPTYFIESDTKILSNSLIKHYNLHTKK 354
Query: 294 VE-KENWLP-KGQITIGITSGASTPDKAVEDVLKKVF 328
E EN++P K Q+T+ +T GAS PD +E VL ++
Sbjct: 355 EEVTENFIPEKEQVTVMLTCGASCPDAIIEGVLTRML 391
>gi|436833687|ref|YP_007318903.1| hydroxymethylbutenyl pyrophosphate reductase [Fibrella aestuarina
BUZ 2]
gi|384065100|emb|CCG98310.1| hydroxymethylbutenyl pyrophosphate reductase [Fibrella aestuarina
BUZ 2]
Length = 410
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 127/344 (36%), Positives = 200/344 (58%), Gaps = 21/344 (6%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKK--QFDVVNKGDVVVL 61
IAY+A + P ++I++ +E+IHNP VN L VQ + G++ F + DVV++
Sbjct: 62 IAYKAIAENPGKRIFLLSEMIHNPDVNADLLSRGVQFLLDTSGRQLIPFTELTPADVVII 121
Query: 62 PAFGAAVEEMVTLNN--KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVA 119
PAFG +E L +V+ +TTCP+V KVW + K +YT ++HGK +HEET A
Sbjct: 122 PAFGTTLETQRELAQIGLDVETYNTTCPFVEKVWNKASQIGKKEYTIVVHGKPTHEETRA 181
Query: 120 TASFA---GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDL 176
T S + ++VKNM +A+ + YI G + E F ++F S GFDP DL
Sbjct: 182 TFSHSKESAPTVVVKNMAQAQRLALYITG------ERSPEQFYDEFAGQYSAGFDPARDL 235
Query: 177 VKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVE----NVNEHFI-SFNTICDATQERQD 231
++G+ NQTTML +T+ I ++ M+R++G+E +V EHF + +T+C AT + QD
Sbjct: 236 RRIGVVNQTTMLASDTQGIADFLKLVMIRQYGLEEGSASVEEHFANTRDTLCYATNDNQD 295
Query: 232 AMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIA-YKLMH 290
A Y ++ DL +V GG+NSSNTSH+ E+ ++ +P+Y+I+S ++ I + L
Sbjct: 296 ATYALLTYPADLAIVAGGYNSSNTSHIVELCAEK-LPTYFIESADKMLSDTLIRHFDLAT 354
Query: 291 GELVEKENWLPKGQ-ITIGITSGASTPDKAVEDVLKKVFEIKRE 333
+ + EN+LP + IT+ +T GAS PD VE +L ++ E
Sbjct: 355 KQEIVTENYLPATRPITVLLTCGASCPDAVVEGILNRLLSFFPE 398
>gi|392968895|ref|ZP_10334311.1| hydroxymethylbutenyl pyrophosphate reductase [Fibrisoma limi BUZ 3]
gi|387843257|emb|CCH56365.1| hydroxymethylbutenyl pyrophosphate reductase [Fibrisoma limi BUZ 3]
Length = 409
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 128/336 (38%), Positives = 203/336 (60%), Gaps = 19/336 (5%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKK--QFDVVNKGDVVVL 61
IAY+A + P ++I++ +E+IHNP VN L+ V+ + G++ + + DVV++
Sbjct: 62 IAYKAIAENPGKRIFLLSEMIHNPDVNADLQSRGVRFLMDTSGRQLTPWSELTPEDVVII 121
Query: 62 PAFGAAVEEMVTLNNKNVQI--VDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVA 119
PAFG +E L + I DTTCP+V KVW + + Y+ ++HGK SHEET A
Sbjct: 122 PAFGTTLETQQQLAAIGLDIEKYDTTCPFVEKVWNKASQIGQKHYSVVVHGKPSHEETRA 181
Query: 120 TASFA---GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDL 176
T S + ++VKNM +A+ + YI GEL +E F ++F S GFDPD DL
Sbjct: 182 TFSHSKESAPTVVVKNMAQAQRLAKYI-TGEL-----PREQFFDEFAGQYSDGFDPDRDL 235
Query: 177 VKVGIANQTTMLKGETEEIGKLVEKTMMRKFGV--ENVNEHFI-SFNTICDATQERQDAM 233
++G+ NQTTML +T+ I +++ M++K + + V+E F + +T+C AT + QDA
Sbjct: 236 QRIGVVNQTTMLASDTQGIADYLKQVMIQKHNLTPDQVDERFANTRDTLCYATNDNQDAT 295
Query: 234 YKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG-E 292
Y ++ D +V GG+NSSNTSH+ E+ E++ +P+Y+I+SE++I I + +HG +
Sbjct: 296 YALLTYPADFAVVAGGYNSSNTSHIVELCEEK-LPTYFIESEQKILSNTLIRHFDLHGKQ 354
Query: 293 LVEKENWLPKGQ-ITIGITSGASTPDKAVEDVLKKV 327
V EN+LP + +T+ +T GAS PD VE +L K+
Sbjct: 355 EVVTENYLPANRPVTVLLTCGASCPDAVVEGILVKL 390
>gi|441496624|ref|ZP_20978851.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Fulvivirga
imtechensis AK7]
gi|441439488|gb|ELR72803.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Fulvivirga
imtechensis AK7]
Length = 417
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 131/334 (39%), Positives = 208/334 (62%), Gaps = 17/334 (5%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKK--QFDVVNKGDVVVL 61
I+Y+A ++ P++++++ +++IHN VNK L+ ++ I +G + ++ + D+V++
Sbjct: 71 ISYKALEENPDKRVFLLSQMIHNQEVNKDLQSRGIEFIMDTDGTQFIPWNELKPEDIVII 130
Query: 62 PAFGAA--VEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVA 119
PAFG +EE++ VQ +TTCP+V KVW EK K +T IIHGK++HEET A
Sbjct: 131 PAFGTTLEIEEILKETGIEVQRYNTTCPFVEKVWKRSEKLGKEHHTIIIHGKHNHEETRA 190
Query: 120 TASFAGKY---IIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDL 176
T S + + +IVK+M EA+ +LG + G+ S E F + F+ S+GFDPD
Sbjct: 191 TFSHSSQTAPSVIVKDMAEAK-----MLGEAIKGNISKAE-FFKLFEGKYSQGFDPDKHF 244
Query: 177 VKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFI-SFNTICDATQERQDAMYK 235
K+G+ NQTTML ET+EI +++ ++ G + HF + +T+C AT + QDA Y
Sbjct: 245 DKLGVVNQTTMLATETQEIADYIKQVIIEMHGENSYKHHFADTRDTLCYATNDNQDATYG 304
Query: 236 MVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG-ELV 294
++EE DL +VVGG+NSSNTSH+ E+ E R P+++I+SE+ I ++I + H + V
Sbjct: 305 LLEEDADLAIVVGGYNSSNTSHIVELCE-RKFPTFFINSEREIISNDEIHHYDYHNKKKV 363
Query: 295 EKENWLP-KGQITIGITSGASTPDKAVEDVLKKV 327
E WLP K ++ I +TSGAS PD V+ V+ K+
Sbjct: 364 ETIGWLPAKPEVKIILTSGASCPDTLVDQVMLKI 397
>gi|294507903|ref|YP_003571961.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Salinibacter
ruber M8]
gi|294344231|emb|CBH25009.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Salinibacter
ruber M8]
Length = 424
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 125/335 (37%), Positives = 198/335 (59%), Gaps = 18/335 (5%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKK--QFDVVNKGDVVVL 61
IAYEA ++ P+++I++ +E+IHNP VN+ L + +Q + +G++ FD + DVV++
Sbjct: 73 IAYEALEENPDKRIFLLSEMIHNPHVNEDLRDRGIQFLRTTQGEQLIPFDELTPDDVVII 132
Query: 62 PAFGAAVEEMVTLNNKNV--QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVA 119
PAFG +E L V + DTTCP+V KVW + D++ ++HGK HEET A
Sbjct: 133 PAFGTTLEVEQKLEEIGVDTEAYDTTCPFVEKVWRKSSQIGDDDHSIVVHGKRYHEETRA 192
Query: 120 TASFA---GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDL 176
T S A G ++V++M+EAE + I G + F + F+ S+ FDP+ DL
Sbjct: 193 TFSHAKEEGPVVVVRDMEEAEELAKVIRG------EKDADFFYDYFEDKYSEDFDPERDL 246
Query: 177 VKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFI-SFNTICDATQERQDAMYK 235
K+G+ NQTTML ET I L+ M ++G +V E F + +T+C AT E Q+A
Sbjct: 247 QKLGVVNQTTMLAEETAAIADLMRDAMRERYGEAHVEERFADTSDTLCYATNENQNATQA 306
Query: 236 MVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG-ELV 294
++E+ DL +VVGG+NSSNTSHL E+ E+ +P+Y+I ++I + +H E V
Sbjct: 307 LIEDGADLGIVVGGYNSSNTSHLVELCEEH-MPTYFIRDASEFDAPSEIHHFDVHAKEEV 365
Query: 295 EKENWLP--KGQITIGITSGASTPDKAVEDVLKKV 327
++W P + + +TSGAS PD +++V++K+
Sbjct: 366 ATDDWFPAEDTPVDVLLTSGASCPDALLDEVVRKI 400
>gi|124004741|ref|ZP_01689585.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microscilla
marina ATCC 23134]
gi|123989864|gb|EAY29393.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microscilla
marina ATCC 23134]
Length = 407
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 125/334 (37%), Positives = 205/334 (61%), Gaps = 17/334 (5%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKK--QFDVVNKGDVVVL 61
IAY ++ P++++++ +E+IHNP VN L+ ++ I G++ ++ + D+V++
Sbjct: 62 IAYRTVEENPDKRVFLLSEMIHNPLVNDDLQSRGIRFIMNTSGEQLIPWEEITAEDIVLI 121
Query: 62 PAFGAAVEEMVTLNNKNVQI--VDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVA 119
PAFG +E L ++ DTTCP+V KVW + K + DYT IIHGK +HEET A
Sbjct: 122 PAFGTTIEIEERLKKMGIETEKYDTTCPFVEKVWKTSAKLGQKDYTVIIHGKANHEETRA 181
Query: 120 TASFA---GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDL 176
T S + II++NM+EA+ L G + G S +E F F S+ FDP DL
Sbjct: 182 TFSHSKSEAPAIIIQNMEEAQK-----LVGVIKGEVSPQE-FYTLFASRFSENFDPSRDL 235
Query: 177 VKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFI-SFNTICDATQERQDAMYK 235
KVG+ NQTTML ET++I +TM+ K+G + V +HF + +T+C AT + Q A Y
Sbjct: 236 QKVGVVNQTTMLASETQDIADYFRQTMVDKYGKDQVKQHFADTRDTLCYATNDNQRATYG 295
Query: 236 MVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVE 295
++E+ DL +V+GG+NSSNT+HL E+ E++ +P+Y+I+SE++I + I + H + +
Sbjct: 296 LLEQDADLAIVIGGYNSSNTTHLAELCEEK-LPTYFINSERKIESKHTIQHFNFHTKQEQ 354
Query: 296 KEN-WLP-KGQITIGITSGASTPDKAVEDVLKKV 327
+ ++P K ++ + +T+GAS PD V+ V++ +
Sbjct: 355 TTSPFIPDKEKVRLLVTAGASCPDSLVDKVIQHL 388
>gi|83816455|ref|YP_445992.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Salinibacter
ruber DSM 13855]
gi|83757849|gb|ABC45962.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Salinibacter
ruber DSM 13855]
Length = 413
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 125/335 (37%), Positives = 198/335 (59%), Gaps = 18/335 (5%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKK--QFDVVNKGDVVVL 61
IAYEA ++ P+++I++ +E+IHNP VN+ L + +Q + +G++ FD + DVV++
Sbjct: 62 IAYEALEENPDKRIFLLSEMIHNPHVNEDLRDRGIQFLRTTQGEQLIPFDELTPDDVVII 121
Query: 62 PAFGAAVEEMVTLNNKNV--QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVA 119
PAFG +E L V + DTTCP+V KVW + D++ ++HGK HEET A
Sbjct: 122 PAFGTTLEVEQKLEEIGVDTEAYDTTCPFVEKVWRKSSQIGDDDHSIVVHGKRYHEETRA 181
Query: 120 TASFA---GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDL 176
T S A G ++V++M+EAE + I G + F + F+ S+ FDP+ DL
Sbjct: 182 TFSHAKEEGPVVVVRDMEEAEELAKVIRG------EKDADFFYDYFEDKYSEDFDPERDL 235
Query: 177 VKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFI-SFNTICDATQERQDAMYK 235
K+G+ NQTTML ET I L+ M ++G +V E F + +T+C AT E Q+A
Sbjct: 236 QKLGVVNQTTMLAEETAAIADLMRDAMRERYGEAHVEERFADTSDTLCYATNENQNATQA 295
Query: 236 MVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG-ELV 294
++E+ DL +VVGG+NSSNTSHL E+ E+ +P+Y+I ++I + +H E V
Sbjct: 296 LIEDGADLGIVVGGYNSSNTSHLVELCEEH-MPTYFIRDASEFDAPSEIHHFDVHAKEEV 354
Query: 295 EKENWLP--KGQITIGITSGASTPDKAVEDVLKKV 327
++W P + + +TSGAS PD +++V++K+
Sbjct: 355 ATDDWFPAEDTPVDVLLTSGASCPDALLDEVVRKI 389
>gi|374586416|ref|ZP_09659508.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Leptonema
illini DSM 21528]
gi|373875277|gb|EHQ07271.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Leptonema
illini DSM 21528]
Length = 434
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 122/332 (36%), Positives = 199/332 (59%), Gaps = 17/332 (5%)
Query: 5 AYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVN--KGDVVVLP 62
AY A + ++I++ +E+IHNP VN+ L++ VQ + +G + + DVV++P
Sbjct: 83 AYRAIDENEGKRIFLLSEMIHNPHVNEDLKQRGVQFLMKTDGTPLIPLTDLKPEDVVIIP 142
Query: 63 AFGAAVEEMVTLNNKNV--QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT 120
AFG VE L ++ + Q DTTCP+V KVW + + YT IIHG++ HEET AT
Sbjct: 143 AFGTTVEMFDLLQSRGIDTQTYDTTCPFVEKVWNRSSQLGEKGYTVIIHGRFKHEETRAT 202
Query: 121 ASFA---GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLV 177
S A +++++M+EA + +YI + + F + F S GF P+ DL
Sbjct: 203 FSHALLNAPGMVIQDMEEAAVLAEYIC------NERPIDRFFQDFPDRCSPGFRPEADLT 256
Query: 178 KVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFI-SFNTICDATQERQDAMYKM 236
++G+ NQTTML ET I + ++ ++R+FG N+++HF + +T+C AT E Q A+ +M
Sbjct: 257 RIGVVNQTTMLATETHAISEFLKSAIIRRFGDTNLSDHFADTRDTLCYATSENQTALKEM 316
Query: 237 VEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAY-KLMHGELVE 295
+ ++ DL L+VGG+NSSNTSHL E+ E++ +P+Y+I E + ++I + L G+
Sbjct: 317 LTDEGDLALIVGGYNSSNTSHLVELCEEK-MPTYYIKDEFELISRDEIRHLDLKGGQAKI 375
Query: 296 KENWLP-KGQITIGITSGASTPDKAVEDVLKK 326
+W+P K +TI +++GAS PD V+ VL +
Sbjct: 376 SSSWMPAKESVTILLSAGASCPDALVDRVLNR 407
>gi|397690200|ref|YP_006527454.1| hydroxymethylbutenyl pyrophosphate reductase [Melioribacter roseus
P3M]
gi|395811692|gb|AFN74441.1| hydroxymethylbutenyl pyrophosphate reductase [Melioribacter roseus
P3M]
Length = 411
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 132/342 (38%), Positives = 200/342 (58%), Gaps = 19/342 (5%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQF---DVVNKGDVVV 60
IAY+ + P ++I++ +E+IHNP VN+ L+ V N ++ QF D + D+V+
Sbjct: 62 IAYKTVRSNPGKRIFLLSEMIHNPHVNEDLKSNGV-NFIMDNHGNQFVPWDEITSDDIVI 120
Query: 61 LPAFGAAVEEMVTLNNKNVQIV--DTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETV 118
+PAFG VE L +KN+ IV +TTCP+V KVW YT +IHGK+ HEET
Sbjct: 121 IPAFGTTVETENLLKSKNIDIVTYNTTCPFVEKVWNRSAALGGKGYTIVIHGKHYHEETR 180
Query: 119 AT---ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVD 175
AT S +IV+++KEA + ++ILG + ++ F F+ ++ F D
Sbjct: 181 ATFSHTSLNSPSVIVRDLKEARILSEFILGYK------NEKEFYRFFEGKLTPHFKFPED 234
Query: 176 LVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFI-SFNTICDATQERQDAMY 234
L ++G+ NQTTML ETEEI L+++TM++K+G EN+ E F + +T+C AT + Q A Y
Sbjct: 235 LERIGVVNQTTMLAEETEEIANLLKQTMLQKYGEENLKERFADTRDTLCYATNDNQSATY 294
Query: 235 KMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAY-KLMHGEL 293
++ ++ D +VVGG+NSSNTSHL EI + P+Y+I +I +I Y + +
Sbjct: 295 ELTKQNADAAIVVGGYNSSNTSHLVEILSAK-FPTYFISDPSKIISKEEILYFDIEQKKE 353
Query: 294 VEKENWLPKGQ-ITIGITSGASTPDKAVEDVLKKVFEIKREE 334
+N+LPK + I ITSGAS PD VE V++K+ E
Sbjct: 354 ATGKNFLPKDRPPVIAITSGASCPDSLVEAVIRKLLSFYDAE 395
>gi|327405912|ref|YP_004346750.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Fluviicola
taffensis DSM 16823]
gi|327321420|gb|AEA45912.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Fluviicola
taffensis DSM 16823]
Length = 414
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 130/340 (38%), Positives = 197/340 (57%), Gaps = 18/340 (5%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKK--QFDVVNKGDVVVL 61
IAY A + ++I++ +++IHNPTVN+ L + ++ I GK+ +D +N DVV++
Sbjct: 73 IAYRAVDENQGKRIFLLSQMIHNPTVNEDLTKHGIEFIQDTAGKQLIPWDELNSNDVVII 132
Query: 62 PAFGAAVEEMVTLNNKNVQI--VDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVA 119
PAFG +E L ++ V +TTCP+V KVW EK ++T +IHGKY HEET A
Sbjct: 133 PAFGTTLEIEQVLKDRGVSTEKYNTTCPFVEKVWNRAEKLGTENHTLVIHGKYDHEETRA 192
Query: 120 TASFAG---KYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDL 176
T S + +IVKNM+EA ++ I G ++KE F FK + F+P++ L
Sbjct: 193 TFSHTALNSEAVIVKNMEEAGFLAKCITG------EASKEEFYNFFKGKHTPSFNPEIHL 246
Query: 177 VKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFI-SFNTICDATQERQDAMYK 235
K+G+ NQTTML ET+EI + +++ V++ F + +T+C AT + Q A
Sbjct: 247 SKIGVINQTTMLASETQEIAEFLKRVTEDFAQKTKVDKTFADTRDTLCYATNDNQSATEA 306
Query: 236 MVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVE 295
++ E +D +VVGG+NSSNT+HL E+ E + P+Y+I E I I +H +E
Sbjct: 307 LMNESLDFAIVVGGYNSSNTTHLVELLEQK-CPTYFIKDESEILTEKSIQSFNIHTHQLE 365
Query: 296 K-ENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREE 334
ENW+ KG IGITSGAS PD ++ V+ K+ E+ E
Sbjct: 366 AIENWI-KGS-KIGITSGASCPDSIIDSVISKIMELTNSE 403
>gi|375143673|ref|YP_005006114.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Niastella
koreensis GR20-10]
gi|361057719|gb|AEV96710.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Niastella
koreensis GR20-10]
Length = 409
Score = 211 bits (536), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 124/336 (36%), Positives = 193/336 (57%), Gaps = 19/336 (5%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKK--QFDVVNKGDVVVL 61
I++ + P ++I++ +E+IHNP VN L+ VQ + G + F+ + DVV++
Sbjct: 62 ISFRTIESNPGKRIFLLSEMIHNPQVNSDLQSRGVQFLQDNYGHQLIPFEELTADDVVII 121
Query: 62 PAFGAAVEEMVTLNNKNVQI--VDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVA 119
PAFG +E L+N + + +TTCP+V KVW E+ + YT +IHGK HEET A
Sbjct: 122 PAFGTTLEIEAKLSNLGIPVEKYNTTCPFVEKVWNRSEQIAQKGYTIVIHGKPKHEETRA 181
Query: 120 TASFAGK---YIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDL 176
T S A +IV +M+EAE + YI G E F +F S GFD L
Sbjct: 182 TFSHAASNAPSVIVNDMQEAENLAKYITG------EKPAELFYTEFANRFSTGFDVTQHL 235
Query: 177 VKVGIANQTTMLKGETEEIGKLVEKTMMRKFGV--ENVNEHFI-SFNTICDATQERQDAM 233
++G+ NQTT L +T+ I + +++T+ +G+ EN+ F + +T+C AT + Q A+
Sbjct: 236 QRIGVVNQTTQLATDTQAIAEFLKQTIQTHYGLTAENIETRFADTRDTLCYATNDNQTAV 295
Query: 234 YKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG-E 292
M++ D+ +VVGG+NSSNT+HL E+ E +P+Y+I+SE+++ + + H E
Sbjct: 296 TGMLQTPADIAIVVGGYNSSNTTHLAELCEQE-LPTYFINSEEKLLSAKAVQHYNFHTKE 354
Query: 293 LVEKENWLPKGQ-ITIGITSGASTPDKAVEDVLKKV 327
+ ++LP GQ I ITSGAS PD VE V++KV
Sbjct: 355 ELNTTDYLPTGQPARILITSGASCPDAVVESVIRKV 390
>gi|284040182|ref|YP_003390112.1| hydroxymethylbutenyl pyrophosphate reductase [Spirosoma linguale
DSM 74]
gi|283819475|gb|ADB41313.1| hydroxymethylbutenyl pyrophosphate reductase [Spirosoma linguale
DSM 74]
Length = 412
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 123/339 (36%), Positives = 198/339 (58%), Gaps = 22/339 (6%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKK--QFDVVNKGDVVVL 61
IAY+A + P ++I++ +E+IHNP VN L+ V+ I +G + + + DVV++
Sbjct: 62 IAYKAIAENPGKRIFLLSEMIHNPDVNADLQSRGVRFIMDTKGNQLIPWSELAPEDVVII 121
Query: 62 PAFGAAVEEMVTLNNKNVQIV--DTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVA 119
PAFG +E L+ + + DTTCP+V KVW + + DYT ++HGK SHEET A
Sbjct: 122 PAFGTTLETQHQLSALGLDVAKYDTTCPFVEKVWNKAGQIGQKDYTVVVHGKPSHEETRA 181
Query: 120 TASF---AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDL 176
T S A ++V++M +A+ + YI GEL + F +F S GF+P+ DL
Sbjct: 182 TFSHSKEAAPTVVVRDMAQAQRLAKYI-TGEL-----PVDEFYSEFAGQYSLGFEPERDL 235
Query: 177 VKVGIANQTTMLKGETEEIGKLVEKTMMRKFGV--ENVNEHFI-SFNTICDATQERQDAM 233
++G+ NQTTML +T+ I +++ M++K+ + HF + +T+C AT + QDA
Sbjct: 236 QRIGVVNQTTMLASDTQSIADYLKQVMVQKYALTPATTEAHFANTRDTLCYATNDNQDAT 295
Query: 234 YKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHG-E 292
Y ++ D +V GG+NSSNTSH+ E+ E + +P+Y+I+SE++I I + H E
Sbjct: 296 YALLTYPADFAIVAGGYNSSNTSHIVELCEQK-LPTYFIESEQKILSDKLIRHFNGHTKE 354
Query: 293 LVEKENWLPKGQ----ITIGITSGASTPDKAVEDVLKKV 327
+ EN++P+ +T+ +T GAS PD VE +L K+
Sbjct: 355 EIVTENFIPESSSANPVTVLLTCGASCPDAVVEGILLKL 393
>gi|256425573|ref|YP_003126226.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Chitinophaga
pinensis DSM 2588]
gi|256040481|gb|ACU64025.1| hydroxymethylbutenyl pyrophosphate reductase [Chitinophaga pinensis
DSM 2588]
Length = 408
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 127/344 (36%), Positives = 203/344 (59%), Gaps = 21/344 (6%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKK--QFDVVNKGDVVVL 61
IA++ + P ++I++ +E+IHNP VN L E VQ I G + ++ + D+V++
Sbjct: 62 IAFKTVEANPGKRIFLLSEMIHNPHVNNDLLEKGVQFIMDTAGTQLVPWESLTPEDIVII 121
Query: 62 PAFGAAVE---EMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETV 118
PAFG +E ++ +L +Q +TTCP+V +VW E+ K Y+ I+HGK HEET
Sbjct: 122 PAFGTTLEIEEKLSSLGIAPLQ-YNTTCPFVERVWNKAEQIGKQSYSVIVHGKPGHEETR 180
Query: 119 ATASFA---GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVD 175
AT S + ++VK++KEA+ + +I G E F FK S GFD D
Sbjct: 181 ATFSHSRSNTPTVVVKDIKEAQLLATFITG------EKNPEEFYILFKGQYSPGFDVIND 234
Query: 176 LVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVE--NVNEHFI-SFNTICDATQERQDA 232
L +VG+ NQTTML ET+ I ++ +M ++ ++ NV+E F + +T+C AT + Q A
Sbjct: 235 LQRVGVVNQTTMLATETQAIADYIKNVIMDRYSLDASNVSERFADTRDTLCYATNDNQSA 294
Query: 233 MYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAY-KLMHG 291
+ ++EE DL +VVGG+NSSNTSHL E+ E + +P+Y+I SE+++ ++ + H
Sbjct: 295 VTGLLEESADLAIVVGGYNSSNTSHLVELCEVK-LPTYFISSEEKLVNAEEVHHWDFHHK 353
Query: 292 ELVEKENWLP-KGQITIGITSGASTPDKAVEDVLKKVFEIKREE 334
+ + +LP K Q+TI +TSGAS PD VE V++++ + E
Sbjct: 354 QELHSRAFLPEKEQVTIMLTSGASCPDAMVEAVIRRLLSFYKLE 397
>gi|408672342|ref|YP_006872090.1| hydroxymethylbutenyl pyrophosphate reductase [Emticicia
oligotrophica DSM 17448]
gi|387853966|gb|AFK02063.1| hydroxymethylbutenyl pyrophosphate reductase [Emticicia
oligotrophica DSM 17448]
Length = 406
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 124/336 (36%), Positives = 195/336 (58%), Gaps = 18/336 (5%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFD--VVNKGDVVVL 61
IAY+ ++ P+++I+ +E+IHNP VN L V+ + +G + D + D VV+
Sbjct: 62 IAYKTIRENPDKRIFFLSEMIHNPDVNADLLSQGVKFLMDTKGNQLIDWSELKPEDAVVV 121
Query: 62 PAFGAAVEEMVTLNNKNVQIV--DTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVA 119
PAFG +E L + + DTTCP+V KVW + + Y+ ++HGK HEET A
Sbjct: 122 PAFGTTIEIQQQLTSLGIDPYKYDTTCPFVEKVWNRAGQIGERGYSIVVHGKPKHEETRA 181
Query: 120 TASFA---GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDL 176
T S + ++V +MKEAE + YI EL KE F E F S+GFDP+ DL
Sbjct: 182 TFSHSKQNAPTVVVNDMKEAEKLAKYI-TREL-----PKEQFYEDFAGQYSEGFDPEKDL 235
Query: 177 VKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVE--NVNEHFI-SFNTICDATQERQDAM 233
++G+ NQTTML +T+ I +++ + + + V +F + +T+C AT + Q+A
Sbjct: 236 DRIGVVNQTTMLASDTQSIADFLKQVITKYHNAQPNEVERYFANTRDTLCYATNDNQEAT 295
Query: 234 YKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGEL 293
Y ++E + DL +VVGG+NSSNTSHL E+ E++ +P+Y+I S + I N + +H +
Sbjct: 296 YALLENQADLAVVVGGYNSSNTSHLVELCEEK-LPTYFIQSHESILDKNLVKRYNLHKKQ 354
Query: 294 VEKENWLP-KGQITIGITSGASTPDKAVEDVLKKVF 328
+++LP K Q+T+ +T GAS PD +E VL K+
Sbjct: 355 EITDDFLPEKPQLTVMLTCGASCPDAVMEAVLLKIL 390
>gi|312131536|ref|YP_003998876.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Leadbetterella
byssophila DSM 17132]
gi|311908082|gb|ADQ18523.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Leadbetterella
byssophila DSM 17132]
Length = 409
Score = 203 bits (517), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 120/342 (35%), Positives = 198/342 (57%), Gaps = 17/342 (4%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKK--QFDVVNKGDVVVL 61
IAY ++ ++++++ +E+IHNP VN L+ V+ + +G + F+ + D+V++
Sbjct: 62 IAYRTIQEHRDKRVFLLSEMIHNPDVNADLQAEGVKFLMDTQGNRLVDFNTLTPEDIVIV 121
Query: 62 PAFGAAVEEMVTLNNKNVQIV--DTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVA 119
PAFG +E L+++ + DTTCP+V KVW + + YT ++HGK HEET A
Sbjct: 122 PAFGTTIEIQKDLSDRGIDPYKYDTTCPFVEKVWNRANQIGERGYTVVVHGKPKHEETRA 181
Query: 120 TASFA---GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDL 176
T S + +++K+++EA + +I E F E+F S+GFDP+ L
Sbjct: 182 TFSHSNASANTVVIKDIQEARELAQFI------RKERPVEEFYERFAGRYSEGFDPEKHL 235
Query: 177 VKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVN--EHFISF-NTICDATQERQDAM 233
K+G+ NQTTML ET+EI +++ +++ +G++ V ++F S +T+C AT + QDA
Sbjct: 236 EKLGVVNQTTMLATETQEIANYLKEELVKYYGLDEVTLPQYFASTKDTLCYATNDNQDAT 295
Query: 234 YKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGEL 293
+++E+ DL +VVGG+NSSNTSHL E+ E++ +P+Y+I S I +I + E
Sbjct: 296 LALLKEEADLAIVVGGYNSSNTSHLVELLEEK-VPTYFIKSATGILSEREILHFHEGHEQ 354
Query: 294 VEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEA 335
V K I +T GAS PD VE+VL ++ E+ EE
Sbjct: 355 VSVNFLGEKAHTRIILTCGASCPDAVVEEVLVRLLELFGEEG 396
>gi|358348285|ref|XP_003638178.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Medicago
truncatula]
gi|355504113|gb|AES85316.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Medicago
truncatula]
Length = 261
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/136 (70%), Positives = 113/136 (83%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYE +QFP KI ITNEIIHN VNK LEEM V+NIP+ EGKKQF+ VNKGDVV+LPA
Sbjct: 94 IAYEVIEQFPNHKIGITNEIIHNTIVNKCLEEMKVENIPIAEGKKQFEFVNKGDVVMLPA 153
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
FGA V+EM+TL+ KNVQIVDTTC WVS VW VEKHK+ DYTSIIHGKY+ ++TVAT SF
Sbjct: 154 FGAVVDEMLTLSEKNVQIVDTTCEWVSTVWNIVEKHKREDYTSIIHGKYAQKKTVATMSF 213
Query: 124 AGKYIIVKNMKEAEYV 139
A KY+I+KNM +A+ +
Sbjct: 214 AEKYVIMKNMADAKMM 229
>gi|374374148|ref|ZP_09631807.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Niabella soli
DSM 19437]
gi|373233590|gb|EHP53384.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Niabella soli
DSM 19437]
Length = 409
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 120/340 (35%), Positives = 196/340 (57%), Gaps = 27/340 (7%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKK--QFDVVNKGDVVVL 61
IA++ + P ++I++ +E+IHNP VN+ L V+ + GK+ F+ + + D+V++
Sbjct: 62 IAFKTVDENPGKRIFLLSEMIHNPQVNEDLLSRGVRFLQDTHGKQIIPFEDLTREDIVLI 121
Query: 62 PAFGAAVEEMVTLNNKNVQI--VDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVA 119
PAFG +E L ++ +TTCP+V KVW E K Y IIHGK SHEET A
Sbjct: 122 PAFGTTLEIEKKLKEIGIRTEQYNTTCPFVEKVWNRSESIAKKAYAIIIHGKPSHEETRA 181
Query: 120 TASFAGK---YIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDL 176
T S A ++V++M++ + YI G + F +FK S+GFD + DL
Sbjct: 182 TFSHAASNAPSVVVRDMQQTIELAKYITGEKPAAD------FYTEFKGQFSEGFDLEKDL 235
Query: 177 VKVGIANQTTMLKGETEEIGKLVEKTMMRKFGV--ENVNEHFI-SFNTICDATQERQDAM 233
++G+ NQTTML +T+ I +++ M+ K+ + E + E F + +T+C AT + Q ++
Sbjct: 236 SRIGVVNQTTMLASDTQAIADYLKQVMIEKYSLTKETLAERFADTRDTLCYATNDNQTSV 295
Query: 234 YKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGEL 293
+M+ D +VVGG+NSSNTSHL E+ E++ +P+Y+I++ +I N+I +H +
Sbjct: 296 MEMLTTAADFAIVVGGYNSSNTSHLVELCEEK-LPTYFINNAGKILNRNEI----LHYDF 350
Query: 294 VEKENWLPKG------QITIGITSGASTPDKAVEDVLKKV 327
+K+ L G + I +TSGAS PD VE V++K+
Sbjct: 351 HKKQELLTNGFLPDHAPVKILMTSGASCPDALVEKVIEKI 390
>gi|397567899|gb|EJK45844.1| hypothetical protein THAOC_35516 [Thalassiosira oceanica]
Length = 247
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 106/232 (45%), Positives = 149/232 (64%), Gaps = 22/232 (9%)
Query: 118 VATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLV 177
+AT S YI VKN EA+YV D+IL + G K+AF+EKF KA S FDP L
Sbjct: 1 MATKSMCETYICVKNEDEAKYVADFILSAD-EGDEDAKKAFMEKFGKACSSHFDPHKHLK 59
Query: 178 KVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMV 237
K+G+ANQTTM K ET IG+L++KTMM K+G + +N+H+ F+TICDATQ RQDA+ ++
Sbjct: 60 KIGLANQTTMYKKETRAIGQLLQKTMMSKYGPDLINDHYYEFDTICDATQVRQDAVDELC 119
Query: 238 -------EEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMH 290
+ +D ILVVGG++SSNT+HL EI + RG+ SY I++ + I N I ++L++
Sbjct: 120 NMHDDPSKPDLDFILVVGGFDSSNTAHLLEIPQMRGVRSYHINTAECISGENTIKHRLVN 179
Query: 291 GELVEKENWL---------PKGQIT-----IGITSGASTPDKAVEDVLKKVF 328
G++V+ L KG+ T +G+TSGASTPDK V+D L ++
Sbjct: 180 GDVVDSAPLLEDEMLWETNEKGEKTKKLLRVGVTSGASTPDKEVQDALGRIM 231
>gi|385047503|gb|AFI39656.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, partial
[Hordeum chilense]
Length = 101
Score = 190 bits (483), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 88/101 (87%), Positives = 95/101 (94%)
Query: 180 GIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEE 239
GIANQTTMLKGETEEIGKLVEKTMMRK+GVEN NEHF++FNTICDATQERQDAMY +V+E
Sbjct: 1 GIANQTTMLKGETEEIGKLVEKTMMRKYGVENANEHFVAFNTICDATQERQDAMYHLVKE 60
Query: 240 KVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGP 280
KVDLILV+GGWNSSNTSHLQEI E GIPSYWIDSE+RI P
Sbjct: 61 KVDLILVIGGWNSSNTSHLQEIGELSGIPSYWIDSEQRIDP 101
>gi|385047505|gb|AFI39657.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, partial
[Hordeum chilense]
Length = 101
Score = 190 bits (482), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 88/101 (87%), Positives = 95/101 (94%)
Query: 180 GIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEE 239
GIANQTTMLKGETEEIGKLVEKTMMRK+GVEN NEHF++FNTICDATQERQDAMY +V+E
Sbjct: 1 GIANQTTMLKGETEEIGKLVEKTMMRKYGVENANEHFVAFNTICDATQERQDAMYHLVKE 60
Query: 240 KVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGP 280
KVDLILV+GGWNSSNTSHLQEI E GIPSYWIDSE+RI P
Sbjct: 61 KVDLILVIGGWNSSNTSHLQEIGELSGIPSYWIDSEQRIEP 101
>gi|388501498|gb|AFK38815.1| unknown [Lotus japonicus]
Length = 107
Score = 187 bits (474), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 88/107 (82%), Positives = 99/107 (92%)
Query: 233 MYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGE 292
MYK+ E +DL+LVVGGWNSSNTSHLQEIAE+R IPSYWID+E+RIGPGN+IAYKLMHGE
Sbjct: 1 MYKLGERDMDLMLVVGGWNSSNTSHLQEIAEERRIPSYWIDTEQRIGPGNRIAYKLMHGE 60
Query: 293 LVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 339
LVEKEN+LP+G ITIGITSGASTPDK VEDVL KVF++KREE LQLA
Sbjct: 61 LVEKENFLPQGPITIGITSGASTPDKVVEDVLIKVFDLKREEVLQLA 107
>gi|254446398|ref|ZP_05059874.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, putative
[Verrucomicrobiae bacterium DG1235]
gi|198260706|gb|EDY85014.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, putative
[Verrucomicrobiae bacterium DG1235]
Length = 543
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 118/350 (33%), Positives = 198/350 (56%), Gaps = 32/350 (9%)
Query: 5 AYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQ------NIPVEE---GKKQFDVVNK 55
AYE P +++++ +E+IHNP VN+ L+ ++ +P+ E G+ +D ++
Sbjct: 179 AYETLAANPGKRVFMLSELIHNPFVNEDLQARGLKYLQSDKGVPLIEEATGRPYWDGLSD 238
Query: 56 GDVVVLPAFGAAVEEMVTLNNKNVQI--VDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYS 113
D+V++PAFGA E+ + L + + I D TC V KVW + ++ + YT +IHGK
Sbjct: 239 ADIVIIPAFGARDEDKLRLIERGLPIRQYDATCMLVEKVWKAARRYGEQGYTIVIHGKAE 298
Query: 114 HEETVATASFAGKY---IIVKNMKEAEYVCDYILGGELNGSSST-KEAFLEKFKKAVSKG 169
HEET AT S + KY ++++++KEA ILG + S K+ E F S G
Sbjct: 299 HEETKATFSNSAKYAPSVVIRDIKEAS-----ILGEVIRAKSKEEKQRLFEPFVSRASVG 353
Query: 170 FDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFI---SFNTICDAT 226
FDP DL ++ + NQTT+L+ ET +I +E+T+ +G +V EH +T+C AT
Sbjct: 354 FDPSKDLDRLALVNQTTLLRNETLKIIAYLEETLAETYGEAHVKEHLAMSSKGDTLCYAT 413
Query: 227 QERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDR-GIPSYWIDSEKRIGPGNKIA 285
Q QDA+ K ++E +D +VVGG NSSNT L + ++R G +++I SE I ++I
Sbjct: 414 QVNQDALAKALDEDIDAAIVVGGKNSSNTFQLFRLCQERFGERAFYIQSEANILSRDEIE 473
Query: 286 YKLM---HGE----LVEKENWLP-KGQITIGITSGASTPDKAVEDVLKKV 327
+ + G+ ++E +LP K ++ + +T GAS PD ++ ++ ++
Sbjct: 474 HFIFPYNPGDPKQGVMETRAFLPEKERVKVLVTGGASCPDGILQQIICRI 523
>gi|294878855|ref|XP_002768499.1| LytB protein, putative [Perkinsus marinus ATCC 50983]
gi|239871019|gb|EER01217.1| LytB protein, putative [Perkinsus marinus ATCC 50983]
Length = 202
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 83/124 (66%), Positives = 106/124 (85%), Gaps = 1/124 (0%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEG-KKQFDVVNKGDVVVLP 62
IAYE+R+++P++ IW+TNE+IHNPTVN+ LEE+ ++ IP + G +K F VV+ GDVV+LP
Sbjct: 79 IAYESRRRYPDKTIWMTNEVIHNPTVNRNLEELGIRYIPRDAGNQKDFSVVSAGDVVILP 138
Query: 63 AFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATAS 122
AFGAAV+EM+ L K V IVDTTCPWVSKVW+SVE+HKKG+YTSIIHGK HEET+AT+S
Sbjct: 139 AFGAAVKEMMELKRKGVTIVDTTCPWVSKVWSSVERHKKGEYTSIIHGKSKHEETIATSS 198
Query: 123 FAGK 126
FA K
Sbjct: 199 FADK 202
>gi|377648360|gb|AFB70984.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, partial
[Mitragyna speciosa]
Length = 96
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 84/96 (87%), Positives = 93/96 (96%)
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
+LV+GGWNSSNTSHLQEIAEDRGIPSYWIDSE+RIGPGN+IAYKL+HGELVEKENWLP+G
Sbjct: 1 MLVIGGWNSSNTSHLQEIAEDRGIPSYWIDSEQRIGPGNRIAYKLLHGELVEKENWLPEG 60
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQLA 339
ITIG+TSGASTPDK VEDVL KVF++KREEALQLA
Sbjct: 61 PITIGVTSGASTPDKVVEDVLVKVFDLKREEALQLA 96
>gi|294055616|ref|YP_003549274.1| hydroxymethylbutenyl pyrophosphate reductase [Coraliomargarita
akajimensis DSM 45221]
gi|293614949|gb|ADE55104.1| hydroxymethylbutenyl pyrophosphate reductase [Coraliomargarita
akajimensis DSM 45221]
Length = 574
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 119/359 (33%), Positives = 190/359 (52%), Gaps = 42/359 (11%)
Query: 5 AYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEG----------------KK 48
AYEA P ++++ +E+IHNP VN+ L ++ + ++G +
Sbjct: 199 AYEAVASNPGRRVFMLSELIHNPFVNEDLLARGLRYLQTDKGLPLRSDGQIAASAADPEA 258
Query: 49 QFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIV--DTTCPWVSKVWTSVEKHKKGDYTS 106
++ + D+V++PAFGA E+ L + I D TC V KVW + ++ + +T
Sbjct: 259 LWNQLTSDDIVIIPAFGATNEDKARLIKAGLSIRAHDATCMLVEKVWKAARRYAQEGFTV 318
Query: 107 IIHGKYSHEETVAT---ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEA--FLEK 161
+IHGK HEET AT +S G ++++NM A + + E TK+A F +
Sbjct: 319 LIHGKAEHEETKATFSNSSSHGPALMIRNMDHARALAAVMRSPE------TKKAKLFEDA 372
Query: 162 FKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFIS--- 218
F S+GFDP DL K+ + NQTT+L+ ET +I + + + +G + V H S
Sbjct: 373 FAGLYSEGFDPARDLEKIAVVNQTTLLRNETLKIIEYLRSVIAEVYGNDAVEAHLWSKGK 432
Query: 219 FNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDR-GIPSYWIDSEKR 277
+T+C ATQ QDA++K VEE+VD+ LVVGG NSSNT L + E + G +++I SE
Sbjct: 433 GDTLCYATQVNQDALHKAVEEQVDIALVVGGRNSSNTYQLYRVCESQFGERAHYIQSEAN 492
Query: 278 IGPGNKIA-YKLMHGELVEKE------NWLPK--GQITIGITSGASTPDKAVEDVLKKV 327
I +I Y G + + E +++P+ +TI +T GAS PD ++ V+ K+
Sbjct: 493 ILSKEQIRHYIFTPGHVPQPEQNEVERSFIPEQTSAVTILLTGGASCPDGIIQQVIHKI 551
>gi|391232823|ref|ZP_10269029.1| penicillin tolerance protein [Opitutaceae bacterium TAV1]
gi|391222484|gb|EIQ00905.1| penicillin tolerance protein [Opitutaceae bacterium TAV1]
Length = 618
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 179/394 (45%), Gaps = 66/394 (16%)
Query: 5 AYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKK---------------- 48
AYE P ++++ +E+IHNP VN+ L ++ + ++G
Sbjct: 201 AYETLAANPGRRVFMLSELIHNPFVNEDLLRRGLRYLQTDKGTPFTTDGRKASAALPPSP 260
Query: 49 -----------------QFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQI--VDTTCPWV 89
+D + D+V++PAFGA ++ L K + + D TC V
Sbjct: 261 PLSLSLSADSAAPATPLLWDTLTPDDIVIIPAFGATDDDKRRLIRKGIALGESDATCMLV 320
Query: 90 SKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKY---IIVKNMKEAEYVCDYILGG 146
KVW + + + YT IIHGK+ HEET AT + ++ +IV+++ E + + I
Sbjct: 321 EKVWKAARSYGRDGYTIIIHGKHEHEETKATFANTRRHAPAVIVRDLAETRLLGEIIASR 380
Query: 147 ELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRK 206
+ + + F EKF ++ FD L +V + NQTT+L ET EI +
Sbjct: 381 D----PAFRATFYEKFAGKHTEDFDVARHLDRVAVVNQTTLLVNETREIIAWLRDLYAAT 436
Query: 207 FG------VENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQE 260
FG + V + +T+C ATQ QDA+ + +++ +D +V+GG NSSNT L
Sbjct: 437 FGPDIPGALPRVGRGGRT-DTLCYATQVNQDALGRALQKPLDAAIVIGGKNSSNTWQLYR 495
Query: 261 IAEDR-GIPSYWIDSEKRIGPGNKIAYKLMHGEL-------VEKENWLPKG--------- 303
+ E + G +++I SE+ I ++ + + E + LP G
Sbjct: 496 LCEQQLGPRAFFIQSERDIRSLAEVEHTVFATHQGANPAGGTEIRSLLPAGVPPHPSPGH 555
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEALQ 337
+ + +T GAS PD ++ V+ ++ AL+
Sbjct: 556 PLRVLVTGGASCPDGLIQQVITRINSFMPPGALR 589
>gi|294937386|ref|XP_002782059.1| hydroxymethylbutenyl 4-diphosphate reductase, putative [Perkinsus
marinus ATCC 50983]
gi|239893356|gb|EER13854.1| hydroxymethylbutenyl 4-diphosphate reductase, putative [Perkinsus
marinus ATCC 50983]
Length = 87
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 61/86 (70%), Positives = 72/86 (83%), Gaps = 1/86 (1%)
Query: 42 PVEEG-KKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHK 100
P + G +K F VV+ GDVV+LPAFGAAV+EM+ L K V IVDTTCPWVSKVW+SVE+HK
Sbjct: 2 PRDAGNQKDFSVVSAGDVVILPAFGAAVKEMMELKRKGVTIVDTTCPWVSKVWSSVERHK 61
Query: 101 KGDYTSIIHGKYSHEETVATASFAGK 126
KG+YTSIIHGK HEET+AT+SFA K
Sbjct: 62 KGEYTSIIHGKSKHEETIATSSFADK 87
>gi|33772203|gb|AAQ54537.1| LYTB-like protein [Malus x domestica]
Length = 71
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/71 (80%), Positives = 65/71 (91%)
Query: 269 SYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVF 328
SYWIDSEKRIGPGN+IAYKL HGELVEKENWLP+G +TIG+TSGASTPDK VED L ++F
Sbjct: 1 SYWIDSEKRIGPGNRIAYKLNHGELVEKENWLPEGPVTIGVTSGASTPDKVVEDTLIRLF 60
Query: 329 EIKREEALQLA 339
++KREE LQLA
Sbjct: 61 DLKREEVLQLA 71
>gi|50540728|gb|AAT77884.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108710911|gb|ABF98706.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
Length = 333
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 54/89 (60%), Positives = 70/89 (78%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AY+AR +FP+ ++W+TN+IIHNPTV++RL+EM ++ IPV G K VV GDVV+ PA
Sbjct: 143 LAYDARVKFPDRRLWLTNQIIHNPTVSERLDEMGIKIIPVVSGVKDLSVVEDGDVVIFPA 202
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKV 92
FG V+EMVTLN KNV IVDTTCP V K+
Sbjct: 203 FGFTVDEMVTLNRKNVHIVDTTCPLVLKL 231
>gi|383128251|gb|AFG44784.1| hypothetical protein CL3614Contig1_03, partial [Pinus taeda]
Length = 74
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/74 (78%), Positives = 64/74 (86%)
Query: 261 IAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAV 320
IAE GIP+YWIDSEKRIGPGN+IAYKL HGELVEKENWLP G + IGITSGASTPDK +
Sbjct: 1 IAEQNGIPTYWIDSEKRIGPGNRIAYKLSHGELVEKENWLPTGPLKIGITSGASTPDKIL 60
Query: 321 EDVLKKVFEIKREE 334
ED LK VF++K EE
Sbjct: 61 EDTLKVVFKMKDEE 74
>gi|20807799|ref|NP_622970.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Thermoanaerobacter tengcongensis MB4]
gi|24211879|sp|Q8RA76.1|ISPH_THETN RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|20516356|gb|AAM24574.1| Penicillin tolerance protein [Thermoanaerobacter tengcongensis MB4]
Length = 288
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 167/332 (50%), Gaps = 68/332 (20%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IAYE + + +++ EIIHNP V K LEE V+ I EE +K KGD +++ +
Sbjct: 21 IAYEELNKQKDTRLYTLGEIIHNPQVVKDLEEKGVRVIEEEELEKL----LKGDRLIIRS 76
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
G + + L K V+I+D TCP+V KV VE++ K Y +I G +H E + +
Sbjct: 77 HGISKKLYEFLEQKGVEIIDVTCPFVKKVQNIVEEYYKKGYDIVIVGDKNHPEVIGVNGW 136
Query: 124 A-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIA 182
K IV +++EAE L F+KA +
Sbjct: 137 CEDKAYIVNSVEEAEN--------------------LPFFEKACA--------------V 162
Query: 183 NQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVD 242
+QTT+++ E+I ++++ + + FNTIC+ATQ+RQ+A + +KVD
Sbjct: 163 SQTTLIEKHWEDILEVLKSKA----------KELVYFNTICNATQKRQEAA-DALSKKVD 211
Query: 243 LILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPK 302
++ V+GG +SSNT L++I E +Y I+ ++I ++++ K
Sbjct: 212 VMFVIGGKHSSNTQKLRKICEKNCKNTYHIER------ADEITFEML------------K 253
Query: 303 GQITIGITSGASTPDKAVEDVLKKVFEIKREE 334
G IGIT+GASTPD +E+V++K+ +K E+
Sbjct: 254 GHDIIGITAGASTPDYVIEEVIEKIKSLKGED 285
>gi|326533892|dbj|BAJ93719.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 69
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 54/68 (79%), Positives = 61/68 (89%)
Query: 272 IDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIK 331
IDSE+RIGPGN+IAYKL HGEL+E ENWLP+G ITIG+TSGASTPDK VED L KVFEIK
Sbjct: 2 IDSEQRIGPGNRIAYKLNHGELIEAENWLPEGPITIGVTSGASTPDKVVEDTLHKVFEIK 61
Query: 332 REEALQLA 339
R+E LQ+A
Sbjct: 62 RQEVLQVA 69
>gi|390559202|ref|ZP_10243560.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nitrolancetus
hollandicus Lb]
gi|390174221|emb|CCF82853.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nitrolancetus
hollandicus Lb]
Length = 318
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 144/312 (46%), Gaps = 56/312 (17%)
Query: 21 NEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKG-DVVVLPAFGAAVEEMVTLNNKNV 79
++IHNP V +RL+ V E D V++G V + A GA E + + +
Sbjct: 39 GDVIHNPQVVQRLKAQGV-----ETADSLDDAVSRGFSRVAITAHGAGPERTESAKQRGL 93
Query: 80 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAG--KYIIVKNMKEAE 137
++VDTTCP V+KV EK + Y +++G H E ++AG + + K++++
Sbjct: 94 EMVDTTCPLVTKVQRLGEKLVRQGYFLVVYGDSYHPEVRGIIAWAGTSRAVAAKHIEDLP 153
Query: 138 YVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGK 197
+ GE D KVGI +QTT K E +
Sbjct: 154 WNAPRGANGE-----------------------DTIAPPRKVGIVSQTT--KNVDEFLAF 188
Query: 198 LVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSH 257
+ E T M V NTIC+ T ERQ+A+ ++ + VDLIL +GG SSNT+
Sbjct: 189 VTELTAM----VAREGGEIRVCNTICEPTSERQNALRRLATQ-VDLILAIGGKKSSNTAR 243
Query: 258 LQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPD 317
L E+ G+PSY I+SE I ++ WL K +G+T+GASTPD
Sbjct: 244 LAEVGRSYGVPSYHIESEAEI-----------------QDEWL-KIVGNVGVTAGASTPD 285
Query: 318 KAVEDVLKKVFE 329
+E V++ + E
Sbjct: 286 DVIESVVRHLQE 297
>gi|167037581|ref|YP_001665159.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|167040243|ref|YP_001663228.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Thermoanaerobacter sp. X514]
gi|300914327|ref|ZP_07131643.1| hydroxymethylbutenyl pyrophosphate reductase [Thermoanaerobacter
sp. X561]
gi|307724437|ref|YP_003904188.1| hydroxymethylbutenyl pyrophosphate reductase [Thermoanaerobacter
sp. X513]
gi|320115996|ref|YP_004186155.1| hydroxymethylbutenyl pyrophosphate reductase [Thermoanaerobacter
brockii subsp. finnii Ako-1]
gi|238687561|sp|B0K197.1|ISPH_THEPX RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|238687698|sp|B0K9L0.1|ISPH_THEP3 RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|166854483|gb|ABY92892.1| hydroxymethylbutenyl pyrophosphate reductase [Thermoanaerobacter
sp. X514]
gi|166856415|gb|ABY94823.1| hydroxymethylbutenyl pyrophosphate reductase [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|300889262|gb|EFK84408.1| hydroxymethylbutenyl pyrophosphate reductase [Thermoanaerobacter
sp. X561]
gi|307581498|gb|ADN54897.1| hydroxymethylbutenyl pyrophosphate reductase [Thermoanaerobacter
sp. X513]
gi|319929087|gb|ADV79772.1| hydroxymethylbutenyl pyrophosphate reductase [Thermoanaerobacter
brockii subsp. finnii Ako-1]
Length = 288
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 160/332 (48%), Gaps = 68/332 (20%)
Query: 5 AYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAF 64
AY+ ++ +KI+ EIIHNP V L + V I EE D + +GD +++ +
Sbjct: 22 AYQEIEKGDGKKIYTLGEIIHNPQVISDLSKKGVNVIEEEE----LDKLTEGDKLIIRSH 77
Query: 65 GAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA 124
G + + L K V+++D TCP+V KV V ++ Y+ II G +H E + +
Sbjct: 78 GVSKKLYDFLAKKGVEVIDVTCPFVKKVQNIVYEYYHKGYSIIIVGDRNHPEVIGVNGWC 137
Query: 125 GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAF-LEKFKKAVSKGFDPDVDLVKVGIAN 183
V N S +EA+ L + +KA +
Sbjct: 138 DDTAYVVN--------------------SIEEAYELPQLEKACA--------------VA 163
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTT+++ ++I +++ K V++ I FNTICDATQ+RQDA ++ +KVD+
Sbjct: 164 QTTLIEKHWKDILEVI------KLKVKD----LIFFNTICDATQKRQDAADEL-SKKVDV 212
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
+ V+GG +SSNT L++I E ++ I+ + + E+V K
Sbjct: 213 MFVIGGKHSSNTQKLKKICEKNCKNTFHIEDAEELTL-----------EMV-------KD 254
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEA 335
IG+T+GASTPD +EDV+KK+ +K E+
Sbjct: 255 HEIIGVTAGASTPDYVIEDVIKKIRFLKGEDG 286
>gi|397567900|gb|EJK45845.1| hypothetical protein THAOC_35517 [Thalassiosira oceanica]
Length = 235
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 73/105 (69%), Gaps = 2/105 (1%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV--EEGKKQFDVVNKGDVVVL 61
+AY A + FP++ I ITNE+IHNP VN+RL V I E+G K F + +GDVV+L
Sbjct: 129 LAYSAVESFPDQDIHITNELIHNPMVNERLHNKNVNFIEKYEEDGTKDFSKIKEGDVVML 188
Query: 62 PAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTS 106
PAFGA ++EM L++K V+IVDTTCPWV+KVW +V H+ TS
Sbjct: 189 PAFGATLDEMKELDSKGVKIVDTTCPWVAKVWATVHTHQVRGLTS 233
>gi|392940994|ref|ZP_10306638.1| LOW QUALITY PROTEIN: (E)-4-hydroxy-3-methyl-but-2-enyl
pyrophosphate reductase [Thermoanaerobacter siderophilus
SR4]
gi|392292744|gb|EIW01188.1| LOW QUALITY PROTEIN: (E)-4-hydroxy-3-methyl-but-2-enyl
pyrophosphate reductase [Thermoanaerobacter siderophilus
SR4]
Length = 288
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 160/332 (48%), Gaps = 68/332 (20%)
Query: 5 AYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAF 64
AY+ ++ +KI+ EIIHNP V L + V I EE D + +GD +++ +
Sbjct: 22 AYQEIEKGDGKKIYTLGEIIHNPQVISDLSKKGVNVIEEEE----LDKLTEGDKLIIRSH 77
Query: 65 GAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA 124
G + + L K V+++D TCP+V KV V ++ Y+ II G +H E + +
Sbjct: 78 GVSKKLYDFLAKKGVEVIDVTCPFVKKVQNIVYEYYHKGYSIIIVGDRNHPEVIGVNGWC 137
Query: 125 GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAF-LEKFKKAVSKGFDPDVDLVKVGIAN 183
V N S +EA+ L + +KA +
Sbjct: 138 DDTAYVVN--------------------SIEEAYELPQLEKACA--------------VA 163
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTT+++ ++I +++ K V++ I FNTICDATQ+RQDA ++ +KVD+
Sbjct: 164 QTTLIEKHWKDILEVI------KLKVKD----LIFFNTICDATQKRQDAADEL-SKKVDV 212
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
+ V+GG +SSNT L++I E ++ I+ + + E+V K
Sbjct: 213 MFVIGGKHSSNTQKLKKICEKNCKNTFHIEDAEELTL-----------EMV-------KD 254
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEA 335
IG+T+GASTPD +EDV++K+ +K E+
Sbjct: 255 HEIIGVTAGASTPDYVIEDVIEKIRFLKGEDG 286
>gi|326391104|ref|ZP_08212651.1| hydroxymethylbutenyl pyrophosphate reductase [Thermoanaerobacter
ethanolicus JW 200]
gi|325992889|gb|EGD51334.1| hydroxymethylbutenyl pyrophosphate reductase [Thermoanaerobacter
ethanolicus JW 200]
Length = 288
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 160/332 (48%), Gaps = 68/332 (20%)
Query: 5 AYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAF 64
AY+ ++ +KI+ EIIHNP V L + V I EE D + +GD +++ +
Sbjct: 22 AYQEIEKGDGKKIYTLGEIIHNPQVISDLSKKGVNVIEEEE----LDKLTEGDKLIIRSH 77
Query: 65 GAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA 124
G + + L K V+++D TCP+V K+ V ++ Y+ II G +H E + +
Sbjct: 78 GVSKKLYDFLAKKGVEVIDVTCPFVKKIQNIVYEYYHKGYSIIIVGDRNHPEVIGVNGWC 137
Query: 125 GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAF-LEKFKKAVSKGFDPDVDLVKVGIAN 183
V N S +EA+ L + +KA +
Sbjct: 138 DDTAYVVN--------------------SIEEAYELPQLEKACA--------------VA 163
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTT+++ ++I +++ K V++ I FNTICDATQ+RQDA ++ +KVD+
Sbjct: 164 QTTLIEKHWKDILEVI------KLKVKD----LIFFNTICDATQKRQDAADEL-SKKVDV 212
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
+ V+GG +SSNT L++I E ++ I+ + + E+V K
Sbjct: 213 MFVIGGKHSSNTQKLKKICEKNCKNTFHIEDAEELTL-----------EMV-------KD 254
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEA 335
IG+T+GASTPD +EDV++K+ +K E+
Sbjct: 255 HEIIGVTAGASTPDYVIEDVIEKIRFLKGEDG 286
>gi|345017661|ref|YP_004820014.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Thermoanaerobacter wiegelii Rt8.B1]
gi|344033004|gb|AEM78730.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Thermoanaerobacter wiegelii Rt8.B1]
Length = 288
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 158/332 (47%), Gaps = 68/332 (20%)
Query: 5 AYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAF 64
AY+ ++ +KI+ EIIHNP V L + V I EE D + +GD +++ +
Sbjct: 22 AYQEIEKGDGKKIYTLGEIIHNPQVISDLSKKGVNVIEEEE----LDKLTEGDKLIIRSH 77
Query: 65 GAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA 124
G + + L K V+++D TCP+V KV V ++ Y+ II G +H E + +
Sbjct: 78 GVSKKLYDFLAKKGVEVIDVTCPFVKKVQNIVYEYYHKGYSIIIVGDRNHPEVIGVNGWC 137
Query: 125 GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAF-LEKFKKAVSKGFDPDVDLVKVGIAN 183
V N S +EA+ L + +KA +
Sbjct: 138 DDTAYVVN--------------------SIEEAYELPQLEKACA--------------VA 163
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTT+++ ++I +++ K V++ I FNTICDATQ+RQDA ++ +KVD+
Sbjct: 164 QTTLIEKHWKDILEVI------KLKVKD----LIFFNTICDATQKRQDAADEL-SKKVDV 212
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
+ V+GG +SSNT L++I G K + + E + E + K
Sbjct: 213 MFVIGGKHSSNTQKLKKIC----------------GKNCKNTFHIEDAEELTLE--MVKD 254
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREEA 335
IG+T+GASTPD +EDV++K+ +K E+
Sbjct: 255 HEIIGVTAGASTPDYVIEDVIEKIRFLKGEDG 286
>gi|449102982|ref|ZP_21739729.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
denticola AL-2]
gi|448965784|gb|EMB46445.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
denticola AL-2]
Length = 289
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 142/313 (45%), Gaps = 62/313 (19%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
++ +IHNP+ RL++M V+ I E D K V+V+ A G + L
Sbjct: 36 LYTFGPLIHNPSTMLRLKQMGVKTIDTENFTGDEDY--KDSVIVIRAHGIPPSKKSELEK 93
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA-GKYIIVKNMKE 135
+++D TC V +KH +G + I+ G +H E ++ A +A GK +IV+N +E
Sbjct: 94 SGAKVIDATCSRVKASQALAKKHSEGAFV-ILAGDKNHGELISIAGYAEGKCLIVQNAEE 152
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
A + D NGS+ V IA QTT+ + E E I
Sbjct: 153 AALI-DLPSSLSANGSA--------------------------VLIA-QTTIKESEYEAI 184
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
++K + FNTIC AT +RQ A+ K+ E VD +LV+GG NS+NT
Sbjct: 185 ASALKKRI----------SDLKVFNTICPATSDRQAALKKLAYE-VDALLVIGGKNSANT 233
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
L + A D PS+ I+ I P +Y + +G+T+GAST
Sbjct: 234 KRLFQTAVDTKKPSWLIEDASEI-PKEIFSYSV------------------VGLTAGAST 274
Query: 316 PDKAVEDVLKKVF 328
PD +++V KK+
Sbjct: 275 PDFIIDEVEKKLL 287
>gi|297544625|ref|YP_003676927.1| hydroxymethylbutenyl pyrophosphate reductase [Thermoanaerobacter
mathranii subsp. mathranii str. A3]
gi|296842400|gb|ADH60916.1| hydroxymethylbutenyl pyrophosphate reductase [Thermoanaerobacter
mathranii subsp. mathranii str. A3]
Length = 288
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 152/320 (47%), Gaps = 68/320 (21%)
Query: 16 KIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLN 75
KI++ EIIHNP V L + V I EE D + +GD +++ + G + + L
Sbjct: 33 KIYMLGEIIHNPQVISDLSKKGVNIIEEEE----LDKLTEGDKLIIRSHGVSKKLYDFLA 88
Query: 76 NKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKE 135
K ++++D TCP+V KV V +H Y+ II G +H E + V N
Sbjct: 89 KKGIEVIDVTCPFVKKVQDIVYEHYHKGYSIIIVGDRNHPEVRGVNGWCDDTAYVVN--- 145
Query: 136 AEYVCDYILGGELNGSSSTKEAF-LEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEE 194
S +EA L K +KA + QTT++ E+
Sbjct: 146 -----------------SIEEAHKLPKLEKACA--------------VAQTTLIGRYWED 174
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
I +++ K V++ + FNTICDATQ+RQ + ++ +KVD++ V+GG +SSN
Sbjct: 175 ILEVI------KLKVKD----LVFFNTICDATQKRQGSAEQL-SKKVDVMFVIGGKHSSN 223
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
T L++I E ++ I+ K + E+V K + IGIT+GAS
Sbjct: 224 TQKLKKICEKNCKNTFHIEDAKELTL-----------EMV-------KDREIIGITAGAS 265
Query: 315 TPDKAVEDVLKKVFEIKREE 334
TPD +E+V+KK+ +K E+
Sbjct: 266 TPDYVIEEVIKKIRFLKGEK 285
>gi|449109772|ref|ZP_21746405.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
denticola ATCC 33520]
gi|448958225|gb|EMB38958.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
denticola ATCC 33520]
Length = 289
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 142/314 (45%), Gaps = 62/314 (19%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
++ +IHNP+ RL++M V+ I E D K V+V+ A G + L
Sbjct: 36 LYTFGPLIHNPSTMLRLKQMGVKTIDTENFTGDEDY--KDSVIVIRAHGIPPSKKSELEK 93
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA-GKYIIVKNMKE 135
+++D TC V +KH + + I+ G +H E ++ A +A GK +IV+N +E
Sbjct: 94 SGAKVIDATCSRVKASQALAKKHSEEAFV-ILAGDKNHGELISIAGYAEGKCLIVQNAEE 152
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
A + D NGS+ V IA QTT+ + E E I
Sbjct: 153 AALI-DLPSSLSANGSA--------------------------VLIA-QTTIKESEYEAI 184
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
++K + FNTIC AT +RQ A+ K+ E VD +LV+GG NS+NT
Sbjct: 185 ASALKKRI----------SDLKVFNTICPATSDRQAALKKLAYE-VDALLVIGGKNSANT 233
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
L + A D PS+ I+ I P +Y + IG+T+GAST
Sbjct: 234 KRLFQTAVDTKKPSWLIEDASEI-PKEIFSYSV------------------IGLTAGAST 274
Query: 316 PDKAVEDVLKKVFE 329
PD +++V KK+ E
Sbjct: 275 PDFIIDEVEKKLLE 288
>gi|269836363|ref|YP_003318591.1| hydroxymethylbutenyl pyrophosphate reductase [Sphaerobacter
thermophilus DSM 20745]
gi|269785626|gb|ACZ37769.1| hydroxymethylbutenyl pyrophosphate reductase [Sphaerobacter
thermophilus DSM 20745]
Length = 317
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 135/316 (42%), Gaps = 58/316 (18%)
Query: 13 PEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMV 72
P + ++IHNP V +RL+ V E Q V + A GA E
Sbjct: 30 PNNPVATIGDVIHNPQVVQRLKARGVDTAESVEEAAQRGFRR----VAITAHGAGPERAR 85
Query: 73 TLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA--GKYIIV 130
++++DTTCP V+KV +K + Y +++G H E ++A + +
Sbjct: 86 LAAEHGLELIDTTCPLVTKVQRLGQKLVRQGYFLVVYGDSFHPEVRGVLAWAETSRAVAA 145
Query: 131 KNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPD--VDLVKVGIANQTTML 188
K++++ + A DPD V KV + +QTT
Sbjct: 146 KHIEDLPW-------------------------NAPRGSTDPDAKVPPRKVAVVSQTTKN 180
Query: 189 KGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVG 248
E E + + R G V NTIC+ T ERQ+A+ ++ E VDLIL +G
Sbjct: 181 VDEFMEFVTQLTSMVARDGGEIRV------CNTICEPTSERQNALRRLAGE-VDLILAIG 233
Query: 249 GWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIG 308
G SSNT+ L E+ G+PSY I+SE I P WL G +G
Sbjct: 234 GKKSSNTARLAEVGRSYGVPSYHIESEAEIEPA-----------------WL-DGVEVVG 275
Query: 309 ITSGASTPDKAVEDVL 324
+T+GASTPD +E V+
Sbjct: 276 VTAGASTPDDVIEGVV 291
>gi|42526606|ref|NP_971704.1| hydroxymethylbutenyl pyrophosphate reductase [Treponema denticola
ATCC 35405]
gi|449112283|ref|ZP_21748837.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
denticola ATCC 33521]
gi|449115498|ref|ZP_21751962.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
denticola ATCC 35404]
gi|50400910|sp|Q73NQ6.1|ISPH_TREDE RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|41816799|gb|AAS11585.1| hydroxymethylbutenyl pyrophosphate reductase [Treponema denticola
ATCC 35405]
gi|448953275|gb|EMB34070.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
denticola ATCC 35404]
gi|448955745|gb|EMB36509.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
denticola ATCC 33521]
Length = 289
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 143/314 (45%), Gaps = 62/314 (19%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
++ +IHNP+ RL++M V+ I E + D K V+V+ A G + L
Sbjct: 36 LYTFGPLIHNPSTMLRLKQMGVRTIDTENFTEDEDY--KDSVIVIRAHGIPPSKKSELEK 93
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA-GKYIIVKNMKE 135
+++D TC V +KH + + I+ G +H E ++ A +A GK +IV+N +E
Sbjct: 94 SGAKVIDATCSRVKASQALAKKHSEEAFV-ILAGDKNHGELISIAGYAEGKCLIVQNAEE 152
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
A + D NGS+ V IA QTT+ + E E I
Sbjct: 153 AALI-DLPSSLSANGSA--------------------------VLIA-QTTIKESEYEAI 184
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
++K + FNTIC AT +RQ A+ K+ E VD +LV+GG NS+NT
Sbjct: 185 ASALKKRI----------SDLKVFNTICPATSDRQAALKKLAYE-VDALLVIGGKNSANT 233
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
L + A D P++ I+ I P +Y + IG+T+GAST
Sbjct: 234 KRLFQTAVDTKKPAWLIEDASEI-PKEIFSYSV------------------IGLTAGAST 274
Query: 316 PDKAVEDVLKKVFE 329
PD +++V KK+ E
Sbjct: 275 PDFIIDEVEKKLLE 288
>gi|449118058|ref|ZP_21754473.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
denticola H-22]
gi|448949949|gb|EMB30773.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
denticola H-22]
Length = 289
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 143/314 (45%), Gaps = 62/314 (19%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
++ +IHNP+ RL++M V+ I E D K V+V+ A G + L
Sbjct: 36 LYTFGPLIHNPSTMLRLKQMGVKTIDTENFTGDEDY--KDSVIVIRAHGIPPSKKSELEK 93
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA-GKYIIVKNMKE 135
+++D TC V +KH + + I+ G +H E ++ A +A GK +IV+N +E
Sbjct: 94 SGAKVIDATCSRVKASQALAKKHSEEAFV-ILAGDKNHGELISIAGYAEGKCLIVQNAEE 152
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
A + D +NGS+ V IA QTT+ + E E I
Sbjct: 153 AALI-DLPSSLSVNGSA--------------------------VLIA-QTTIKESEYEAI 184
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
++K + FNTIC AT +RQ A+ K+ E VD +LV+GG NS+NT
Sbjct: 185 ASALKKRI----------SDLKVFNTICPATYDRQAALKKLAYE-VDALLVIGGKNSANT 233
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
L + A D PS+ I+ I P +Y + +G+T+GAST
Sbjct: 234 KRLFQTAVDTKKPSWLIEDASEI-PKEIFSYSV------------------VGLTAGAST 274
Query: 316 PDKAVEDVLKKVFE 329
PD +++V KK+ E
Sbjct: 275 PDFIIDEVEKKLLE 288
>gi|118579777|ref|YP_901027.1| hydroxymethylbutenyl pyrophosphate reductase [Pelobacter
propionicus DSM 2379]
gi|166217472|sp|A1ANP9.1|ISPH_PELPD RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|118502487|gb|ABK98969.1| hydroxymethylbutenyl pyrophosphate reductase [Pelobacter
propionicus DSM 2379]
Length = 280
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 149/330 (45%), Gaps = 71/330 (21%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+A+EA ++K + IIH+P V K+LEEM V+ + K D ++ G +++ +
Sbjct: 21 MAFEAAGM--DKKTYTLGPIIHSPQVVKKLEEMGVRAL------KDLDSMDSG-TIIIRS 71
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
G A E+ K ++IVD TCP+V K V+ + Y ++ G H E S+
Sbjct: 72 HGVASHEIAEAMQKKLEIVDATCPFVKKAQEHVKSLSETGYGVVVVGDADHPEVQGIVSY 131
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
G + +++G +G K + K +G+
Sbjct: 132 GGDKV-------------FVVG---SGEEVRKLPIMNK-----------------IGVVA 158
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTT E + +V + + R + FNTICDAT RQ+ K + +VD
Sbjct: 159 QTTQ---SFENLKNVVSECLQRGGEIR-------VFNTICDATAVRQEEA-KELARQVDC 207
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
+LVVGG+NS+NT L E+ + ++ I++ I P W +G
Sbjct: 208 MLVVGGFNSANTRRLAEVCAELQPRTHHIETAAEIDPA-----------------WF-EG 249
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKRE 333
T+G+T+GASTP +++V+ ++ EI ++
Sbjct: 250 VATVGVTAGASTPKWIIDEVMGRIGEINKK 279
>gi|269925755|ref|YP_003322378.1| hydroxymethylbutenyl pyrophosphate reductase [Thermobaculum
terrenum ATCC BAA-798]
gi|269789415|gb|ACZ41556.1| hydroxymethylbutenyl pyrophosphate reductase [Thermobaculum
terrenum ATCC BAA-798]
Length = 293
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 146/313 (46%), Gaps = 58/313 (18%)
Query: 23 IIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIV 82
++HNP V + E+ + + V D V+ G + + A GA + K ++++
Sbjct: 38 LVHNPQV---VSELKARGVGV---AYSVDEVDSGTLTIT-AHGAGPDAYAEAQRKGLRLL 90
Query: 83 DTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVK-NMKEAEYVCD 141
DTTCP V+KV E K Y +++G +H+E + +V + KE
Sbjct: 91 DTTCPLVTKVQKIAESLHKDGYQVVVYGDPNHQEVRGIVGWTENTALVSTDAKE------ 144
Query: 142 YILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEK 201
L L +S+K+ +K VS+ P + K IA ++L
Sbjct: 145 --LVPRLKALTSSKKRVPKKL-AVVSQTTQP-AERFKSFIAELVSLLP------------ 188
Query: 202 TMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEI 261
++ NE F NTIC T +RQ A+ ++ E VD+++VVGG +S+NT HL E+
Sbjct: 189 --------DDFNE-FHVHNTICQPTLDRQSAVVELANE-VDVMVVVGGRDSANTKHLAEL 238
Query: 262 AEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVE 321
A + G+P+Y I+ + I P NW KG +G+T+GASTPD +E
Sbjct: 239 ASEEGVPTYHIEWPEEIDP-----------------NWF-KGAKVVGVTAGASTPDAVIE 280
Query: 322 DVLKKVFEIKREE 334
V+K + I+ EE
Sbjct: 281 KVVKTIEAIEPEE 293
>gi|449120498|ref|ZP_21756883.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
denticola H1-T]
gi|449122905|ref|ZP_21759236.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
denticola MYR-T]
gi|448947001|gb|EMB27851.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
denticola MYR-T]
gi|448947893|gb|EMB28736.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
denticola H1-T]
Length = 289
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 143/314 (45%), Gaps = 62/314 (19%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
++ +IHNP+ RL++M V+ I E + D K V+V+ A G + L
Sbjct: 36 LYTFGPLIHNPSTMLRLKQMGVRTIDTENFTEDEDY--KDSVIVIRAHGIPPSKKSELEK 93
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA-GKYIIVKNMKE 135
+++D TC V +KH + + I+ G +H E ++ A +A GK +IV+N +E
Sbjct: 94 SGAKVIDATCSRVKASQALAKKHSEEAFV-ILAGDKNHGELISIAGYAEGKCLIVQNAEE 152
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
A + D NGS+ V IA QTT+ + E E I
Sbjct: 153 AALI-DLPSSLSANGSA--------------------------VLIA-QTTIKESEYEAI 184
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
++K + FNTIC AT +RQ A+ K+ E VD +LV+GG NS+NT
Sbjct: 185 ASALKKRI----------SDLKVFNTICPATYDRQAALKKLAYE-VDALLVIGGKNSANT 233
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
L + A D P++ I+ I P +Y + IG+T+GAST
Sbjct: 234 KRLFQTAVDTKKPAWLIEDASEI-PKEIFSYSV------------------IGLTAGAST 274
Query: 316 PDKAVEDVLKKVFE 329
PD +++V KK+ E
Sbjct: 275 PDFIIDEVEKKLLE 288
>gi|449125873|ref|ZP_21762175.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
denticola OTK]
gi|448939842|gb|EMB20759.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
denticola OTK]
Length = 289
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 142/314 (45%), Gaps = 62/314 (19%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
++ +IHNP+ RL++M V+ I E + D K V+V+ A G + L
Sbjct: 36 LYTFGPLIHNPSTMLRLKQMGVRTIDTENFTEDEDY--KDSVIVIRAHGIPPSKKSELEK 93
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA-GKYIIVKNMKE 135
+++D TC V +KH + + I+ G +H E ++ A +A GK +IV+N +E
Sbjct: 94 SGAKVIDATCSRVKASQALAKKHSEEAFV-ILAGDKNHGELISIAGYAEGKCLIVQNAEE 152
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
A + D NGS+ V IA QTT+ + E E I
Sbjct: 153 AALI-DLPSSLSANGSA--------------------------VLIA-QTTIKESEYEAI 184
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
++K + FNTIC AT +RQ A+ K+ E VD +LV+GG NS+NT
Sbjct: 185 ASALKKRI----------SDLKVFNTICPATYDRQAALKKLAYE-VDALLVIGGKNSANT 233
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
L + A D PS+ I+ I P Y + IG+T+GAST
Sbjct: 234 KRLFQTAVDTKKPSWLIEDASEI-PKEIFYYSV------------------IGLTAGAST 274
Query: 316 PDKAVEDVLKKVFE 329
PD +++V KK+ E
Sbjct: 275 PDFIIDEVEKKLLE 288
>gi|339500441|ref|YP_004698476.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Spirochaeta
caldaria DSM 7334]
gi|338834790|gb|AEJ19968.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Spirochaeta
caldaria DSM 7334]
Length = 289
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 151/325 (46%), Gaps = 63/325 (19%)
Query: 6 YEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFG 65
Y+ + PE KI +IHNP +L+E + I ++ D V V++ A G
Sbjct: 23 YQELEAHPERKILTLGPLIHNPITLGQLQEKGISII--HNHEEITDPVQ--TTVIIRAHG 78
Query: 66 AAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAG 125
E + N ++VD TCP V + + Y +I G+ H E + +A
Sbjct: 79 VPPEVAQNIINTGAKLVDATCPKVHISQKKAAQFAQAGYQVLIVGEPEHSEIIGILGYAP 138
Query: 126 KYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQT 185
I++KN++EA V ++ K+ +G + VK+ + QT
Sbjct: 139 HAIVIKNLEEALQVA-------------------QRIKQ--HQG-----EYVKIVLMAQT 172
Query: 186 TMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLIL 245
T + E+I +++ + + EH TIC+AT+ERQ+A+Y + +E VD +L
Sbjct: 173 TFSEITFEKI-----VNTLKELFPDLIVEH-----TICNATRERQEALYNLCKE-VDALL 221
Query: 246 VVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQI 305
V+GG S+NT L+ IAE++G+P + I+ E +I E+ P
Sbjct: 222 VIGGKESANTQRLKSIAEEQGVPVWLIEDEHKIP---------------EQIYEFP---- 262
Query: 306 TIGITSGASTPDK---AVEDVLKKV 327
T+GIT+GASTP + VE +LK V
Sbjct: 263 TVGITAGASTPKEIIDRVESILKTV 287
>gi|219854800|ref|YP_002471922.1| hypothetical protein CKR_1457 [Clostridium kluyveri NBRC 12016]
gi|219568524|dbj|BAH06508.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 640
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 156/331 (47%), Gaps = 69/331 (20%)
Query: 5 AYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAF 64
A AR++F ++KI+ +IHN V L++ + I +++ + + DVVV+ +
Sbjct: 25 AISAREKF-KKKIYTLGPLIHNSDVVNNLKKKGIYPIELDD----ICSLKEDDVVVIRSH 79
Query: 65 GAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA 124
G A + + L NK + +V+ TCP+VS + VEK+ K Y+ +I G +H E V +
Sbjct: 80 GVAKDILTLLENKKINVVNATCPYVSNIQKKVEKYYKLGYSILIVGDINHPEVVGINGWC 139
Query: 125 -GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
II KN G D D +K+ I +
Sbjct: 140 ENTGIISKN------------------------------------GVDLDKLPLKICIVS 163
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTT + E++ +V K FI+FNTIC AT+ RQ A + + +KVD+
Sbjct: 164 QTTEKQSNWEKVLNIVAKEC----------REFIAFNTICSATEFRQKAA-ECISKKVDM 212
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG NSSNT+ L EI + + +++ I P N I K N +
Sbjct: 213 MVVIGGKNSSNTTKLYEICKSNCNNTIHVENSGEI-PDNII-----------KTNKIK-- 258
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREE 334
TIG+T+GASTP+ +++ + K+ + K E
Sbjct: 259 --TIGVTAGASTPNWIIKEAVLKMSDDKNLE 287
>gi|333897069|ref|YP_004470943.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Thermoanaerobacterium xylanolyticum LX-11]
gi|333112334|gb|AEF17271.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Thermoanaerobacterium xylanolyticum LX-11]
Length = 283
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 151/331 (45%), Gaps = 68/331 (20%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AY+ + K + E+IHNP V K LE+ ++ I + D +++ +++
Sbjct: 21 MAYDQVNNSDDSKTYAYGELIHNPQVVKDLEDKGIKTI------EHIDELDENSKILIRT 74
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
G + L NK V+I+D TCP+V +V V + K Y+ +I G +H E +
Sbjct: 75 HGIPKKIYEELKNKKVEIIDMTCPFVKRVQKIVNGYYKKGYSIVIIGDRNHPEVIG---- 130
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
+NG + ++ S F L K +
Sbjct: 131 ------------------------VNGWCNNSAYVIQSTDDVNSLPF-----LDKTCVVA 161
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTT+ + E+I L+ + + IS+NTICDAT +RQ + K+ +E VD+
Sbjct: 162 QTTITQKMWEDILDLLHLKV----------KELISYNTICDATNKRQSSAEKISKE-VDM 210
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG NSSNT L++I E + ++S I L+ + VE
Sbjct: 211 MIVIGGKNSSNTQKLKKICEKNCDKTIQVESADEID--------LITLKDVE-------- 254
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREE 334
T+GIT+GASTPD +++V+ K+ ++EE
Sbjct: 255 --TVGITAGASTPDYLIQEVIDKITSGRKEE 283
>gi|153954192|ref|YP_001394957.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
kluyveri DSM 555]
gi|146347073|gb|EDK33609.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase-related protein
[Clostridium kluyveri DSM 555]
Length = 637
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 156/331 (47%), Gaps = 69/331 (20%)
Query: 5 AYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAF 64
A AR++F ++KI+ +IHN V L++ + I +++ + + DVVV+ +
Sbjct: 22 AISAREKF-KKKIYTLGPLIHNSDVVNNLKKKGIYPIELDD----ICSLKEDDVVVIRSH 76
Query: 65 GAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA 124
G A + + L NK + +V+ TCP+VS + VEK+ K Y+ +I G +H E V +
Sbjct: 77 GVAKDILTLLENKKINVVNATCPYVSNIQKKVEKYYKLGYSILIVGDINHPEVVGINGWC 136
Query: 125 -GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
II KN G D D +K+ I +
Sbjct: 137 ENTGIISKN------------------------------------GVDLDKLPLKICIVS 160
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTT + E++ +V K FI+FNTIC AT+ RQ A + + +KVD+
Sbjct: 161 QTTEKQSNWEKVLNIVAKEC----------REFIAFNTICSATEFRQKAA-ECISKKVDM 209
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG NSSNT+ L EI + + +++ I P N I K N +
Sbjct: 210 MVVIGGKNSSNTTKLYEICKSNCNNTIHVENSGEI-PDNII-----------KTNKIK-- 255
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREE 334
TIG+T+GASTP+ +++ + K+ + K E
Sbjct: 256 --TIGVTAGASTPNWIIKEAVLKMSDDKNLE 284
>gi|253699628|ref|YP_003020817.1| hydroxymethylbutenyl pyrophosphate reductase [Geobacter sp. M21]
gi|259493946|sp|C6E2B3.1|ISPH_GEOSM RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|251774478|gb|ACT17059.1| hydroxymethylbutenyl pyrophosphate reductase [Geobacter sp. M21]
Length = 283
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 150/332 (45%), Gaps = 72/332 (21%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+A+EA E + IIH+P V +RLEEM V IPVE+ + V G +++ +
Sbjct: 21 LAFEAADTGSE--TYTLGPIIHSPQVVQRLEEMGV--IPVEDVSE----VETGGTIIIRS 72
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
G A EE+ N+++VD TCP+V K V K Y ++ G H E S+
Sbjct: 73 HGVAAEELEAAVRANLEVVDATCPFVKKAQEHVATLSKEGYDIVVVGDAVHPEVQGIVSY 132
Query: 124 A-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIA 182
A G+ +V + K+ +E+ + + K+GI
Sbjct: 133 AAGRVYVVSSDKD-----------------------VERLPR-----------MSKIGIV 158
Query: 183 NQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVD 242
QTT E + +V + R G V +NTICDAT RQD K+ VD
Sbjct: 159 AQTTQ---SFEHLHDVVTACLARG-GETRV------YNTICDATAVRQDEAKKLAG-AVD 207
Query: 243 LILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPK 302
++V+GG+NS+NT L +I + ++ +++ +I E W K
Sbjct: 208 CMVVIGGFNSANTKRLAQICRELLPRTHHVETACQI-----------------DEQWF-K 249
Query: 303 GQITIGITSGASTPDKAVEDVLKKVFEIKREE 334
G +G+T+GASTP +++V+ ++ I +++
Sbjct: 250 GVEKVGVTAGASTPKWIIDEVIDRISAIDKDK 281
>gi|289578347|ref|YP_003476974.1| hydroxymethylbutenyl pyrophosphate reductase [Thermoanaerobacter
italicus Ab9]
gi|289528060|gb|ADD02412.1| hydroxymethylbutenyl pyrophosphate reductase [Thermoanaerobacter
italicus Ab9]
Length = 288
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 151/320 (47%), Gaps = 68/320 (21%)
Query: 16 KIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLN 75
KI++ EIIHNP V L + V I EE D + +GD +++ + G + + L
Sbjct: 33 KIYMLGEIIHNPQVISDLSKKGVNVIEEEE----LDKLTEGDKLIIRSHGVSKKLYDFLA 88
Query: 76 NKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKE 135
K ++++D TCP+V KV V +H Y+ II G +H E + V N
Sbjct: 89 KKGIEVIDVTCPFVKKVQDIVYEHYHKGYSIIIVGDRNHPEVRGVNGWCDDTAYVVN--- 145
Query: 136 AEYVCDYILGGELNGSSSTKEAF-LEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEE 194
S +EA L K +KA + QTT++ ++
Sbjct: 146 -----------------SIEEAHKLPKLEKACA--------------VAQTTLIGRYWKD 174
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
I +++ K V++ + FNTICDATQ+RQ + ++ +KVD++ V+GG +SSN
Sbjct: 175 ILEVI------KLKVKD----LVFFNTICDATQKRQGSAEQL-SKKVDVMFVIGGKHSSN 223
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
T L++I E ++ I+ K + E+V K + IGIT+GAS
Sbjct: 224 TQKLKKICEKNCKNTFHIEDAKELTL-----------EMV-------KDREIIGITAGAS 265
Query: 315 TPDKAVEDVLKKVFEIKREE 334
TPD +E+V KK+ +K E+
Sbjct: 266 TPDYVIEEVTKKIRFLKGEK 285
>gi|422342925|ref|ZP_16423864.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
denticola F0402]
gi|325473142|gb|EGC76338.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
denticola F0402]
Length = 289
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 142/314 (45%), Gaps = 62/314 (19%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
++ +IHNP+ RL++M V+ I E D K V+V+ A G + L
Sbjct: 36 LYTFGPLIHNPSTMLRLKQMGVKTIDTENFTGDEDY--KDSVIVIRAHGIPPSKKSELEK 93
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA-GKYIIVKNMKE 135
+++D TC V +KH + + I+ G +H E ++ A +A G+ +IV+N +E
Sbjct: 94 SGAKVIDATCSRVKASQALAKKHSEEAFV-ILAGDKNHGELISIAGYAEGRCLIVQNAEE 152
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
A + D NGS+ V IA QTT+ + E E I
Sbjct: 153 AALI-DLPSSLSANGSA--------------------------VLIA-QTTIKESEYEAI 184
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
++K + FNTIC AT +RQ A+ K+ E VD +LV+GG NS+NT
Sbjct: 185 ASALKKRI----------SDLKVFNTICPATYDRQAALKKLAYE-VDALLVIGGKNSANT 233
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
L + A D P++ I+ I P +Y + IG+T+GAST
Sbjct: 234 KRLFQTAVDTKKPAWLIEDASEI-PKEIFSYSV------------------IGLTAGAST 274
Query: 316 PDKAVEDVLKKVFE 329
PD +++V KK+ E
Sbjct: 275 PDFIIDEVEKKLLE 288
>gi|449128226|ref|ZP_21764473.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
denticola SP33]
gi|448941559|gb|EMB22460.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
denticola SP33]
Length = 289
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 142/313 (45%), Gaps = 62/313 (19%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
++ +IHNP+ RL++M V+ I E D K V+V+ A G + L
Sbjct: 36 LYTFGPLIHNPSTMLRLKQMGVKTIDTENFTGDEDY--KDSVIVIRAHGIPPSKKSELEK 93
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA-GKYIIVKNMKE 135
+++D TC V +KH + + I+ G +H E ++ A +A GK +IV+N +E
Sbjct: 94 SGAKVIDATCSRVKASQALAKKHSEEAFV-ILAGDKNHGELISIAGYAEGKCLIVQNAEE 152
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
A + D +NGS+ V IA QTT+ + E E I
Sbjct: 153 ASLI-DLPSFLSVNGSA--------------------------VLIA-QTTIKESEYEAI 184
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
++K + FNTIC AT +RQ A+ K+ E VD +LV+GG NS+NT
Sbjct: 185 ASALKKRI----------SDLKVFNTICPATYDRQAALKKLAYE-VDALLVIGGKNSANT 233
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
L + A D PS+ I+ I P +Y + +G+T+GAST
Sbjct: 234 KRLFQTAVDTKKPSWLIEDASEI-PKEIFSYSM------------------VGLTAGAST 274
Query: 316 PDKAVEDVLKKVF 328
PD +++V KK+
Sbjct: 275 PDFIIDEVEKKLL 287
>gi|291280465|ref|YP_003497300.1| hydroxymethylbutenyl pyrophosphate reductase [Deferribacter
desulfuricans SSM1]
gi|290755167|dbj|BAI81544.1| hydroxymethylbutenyl pyrophosphate reductase [Deferribacter
desulfuricans SSM1]
Length = 287
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 145/312 (46%), Gaps = 70/312 (22%)
Query: 23 IIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIV 82
IIHNP + +L+E V +P+E D V V++ + G + L NK V+I+
Sbjct: 38 IIHNPQLVNKLKEKGV--LPLE----NIDEVKDVHTVIIRSHGITKDNYELLKNKGVEII 91
Query: 83 DTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCD 141
D TCP+V K S K K Y+ I+ G +H E S+ G+Y +V N +EA+ +
Sbjct: 92 DATCPFVIKAHNSAMKLSKEGYSVIVFGDKNHPEVKGIVSYVEGEYFLVSNSEEAKNL-- 149
Query: 142 YILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEK 201
F+K K G+ QTT EE+ +V+
Sbjct: 150 -------------------PFRK-------------KYGLVAQTTQNSQSFEEVVSVVQD 177
Query: 202 TMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEI 261
+ NTIC+AT RQ+A K V ++VD+++V+GG NS NT L EI
Sbjct: 178 KC----------DELKVINTICNATTHRQEAA-KEVAKQVDMMIVIGGKNSGNTRRLFEI 226
Query: 262 AEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVE 321
+ + I+++ ++++ K+ E +EK +GIT+GASTPD ++
Sbjct: 227 CSELCKNTVHIETK------DELSEKMF--ENIEK----------VGITAGASTPDYLIK 268
Query: 322 DVLKKVFEIKRE 333
DV+ + E+K E
Sbjct: 269 DVINYLEEVKNE 280
>gi|402829351|ref|ZP_10878227.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Slackia sp.
CM382]
gi|402284332|gb|EJU32835.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Slackia sp.
CM382]
Length = 275
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 139/315 (44%), Gaps = 72/315 (22%)
Query: 14 EEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVT 73
+E ++ +IHNP V +L++ V++I EG D +VVL G +
Sbjct: 29 DEDVFTIGPLIHNPRVVAQLKDHGVESI---EGPADVD----HGIVVLRTHGVEPSVVEE 81
Query: 74 LNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVA-TASFAGKYIIVKN 132
L+ + + +D TCP VS+ + T ++ G+ SH E A AG ++V +
Sbjct: 82 LDERGLSSIDATCPHVSRAQKAAADFAAQGMTVLVIGRASHPEVRGICAHAAGSAVVVAD 141
Query: 133 MKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGET 192
E + ++ G VGI QTT K +
Sbjct: 142 ASE--------IPADIAG---------------------------PVGIVVQTTENKSKL 166
Query: 193 EEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNS 252
+E+ +R G+E V + NTIC AT++RQDA + + KVD ++V+GG NS
Sbjct: 167 DEV-----VADLRGRGIEPVVK-----NTICSATRKRQDAAADLAD-KVDALVVIGGKNS 215
Query: 253 SNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSG 312
SNT+HL EI SY I++E I P W G +G+T+G
Sbjct: 216 SNTTHLFEICRAHCSRSYHIETEDEIDPA-----------------WF-DGVEAVGVTAG 257
Query: 313 ASTPDKAVEDVLKKV 327
ASTPD+ +E V+ ++
Sbjct: 258 ASTPDEQIEAVVARI 272
>gi|269215387|ref|ZP_06159241.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Slackia exigua
ATCC 700122]
gi|269130874|gb|EEZ61949.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Slackia exigua
ATCC 700122]
Length = 275
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 139/315 (44%), Gaps = 72/315 (22%)
Query: 14 EEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVT 73
+E ++ +IHNP V +L++ V++I EG D +VVL G +
Sbjct: 29 DEDVFTIGPLIHNPRVVAQLKDHGVESI---EGPADVD----HGIVVLRTHGVEPSVVEE 81
Query: 74 LNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVA-TASFAGKYIIVKN 132
L+ + + +D TCP VS+ + T ++ G+ SH E A AG ++V +
Sbjct: 82 LDERGLSSIDATCPHVSRAQKAAADFAAQGMTVLVIGRASHPEVRGICAHAAGSAVVVAD 141
Query: 133 MKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGET 192
E + ++ G VGI QTT K +
Sbjct: 142 ASE--------IPADIAG---------------------------PVGIVVQTTENKSKL 166
Query: 193 EEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNS 252
+E+ +R G+E V + NTIC AT++RQDA + + KVD ++V+GG NS
Sbjct: 167 DEV-----VADLRGRGIEPVVK-----NTICSATRKRQDAAADLAD-KVDALVVIGGKNS 215
Query: 253 SNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSG 312
SNT+HL EI SY I++E I P W G +G+T+G
Sbjct: 216 SNTTHLFEICRAHCSRSYHIETEDEIDP-----------------TWF-DGVEAVGVTAG 257
Query: 313 ASTPDKAVEDVLKKV 327
ASTPD+ +E V+ ++
Sbjct: 258 ASTPDEQIEAVVARI 272
>gi|256831986|ref|YP_003160713.1| hydroxymethylbutenyl pyrophosphate reductase [Jonesia denitrificans
DSM 20603]
gi|256685517|gb|ACV08410.1| hydroxymethylbutenyl pyrophosphate reductase [Jonesia denitrificans
DSM 20603]
Length = 368
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 139/330 (42%), Gaps = 75/330 (22%)
Query: 2 AFIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVL 61
A IA E + +++ EI+HN V + L + + + D V +G VV
Sbjct: 53 AVIAVEKALEVHGAPVYVRKEIVHNKFVVETLTDRGAIFV------NETDEVPEGARVVF 106
Query: 62 PAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATA 121
A G + + + +N+Q +D TCP V+KV + DY ++ G HEE TA
Sbjct: 107 SAHGVSPAVVASAQQRNLQTIDATCPLVTKVHKEAVRFASDDYDILLIGHDGHEEVEGTA 166
Query: 122 SFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGI 181
A +I V N + + K V + DPD KV
Sbjct: 167 GEAPDHIQVVNSPD-------------------------EVDKVVVR--DPD----KVVW 195
Query: 182 ANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKM 236
+QTT+ ET E V + E F + + IC ATQ RQ AM K+
Sbjct: 196 ISQTTLSVDETMET-------------VRRLRERFPTLQDPPSDDICYATQNRQVAMKKL 242
Query: 237 VEEKVDLILVVGGWNSSNTSHLQEIAEDRGI-PSYWIDSEKRIGPGNKIAYKLMHGELVE 295
DL+LVVG NSSN+ L E+A D G SY ID K I
Sbjct: 243 APH-CDLVLVVGSTNSSNSVRLTEVALDAGARASYLIDYAKEI----------------- 284
Query: 296 KENWLPKGQITIGITSGASTPDKAVEDVLK 325
E WL G T+G++SGAS P+ V+DVLK
Sbjct: 285 DETWL-DGVETVGLSSGASVPEILVQDVLK 313
>gi|449106999|ref|ZP_21743659.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
denticola ASLM]
gi|451968696|ref|ZP_21921925.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
denticola US-Trep]
gi|448963624|gb|EMB44301.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
denticola ASLM]
gi|451702709|gb|EMD57111.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
denticola US-Trep]
Length = 289
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 142/314 (45%), Gaps = 62/314 (19%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
++ +IHNP+ RL++M V+ I E + D K V+V+ A G + L
Sbjct: 36 LYTFGPLIHNPSTMLRLKQMGVKTIDTENFTEDEDY--KDSVIVIRAHGIPPSKKDELEK 93
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA-GKYIIVKNMKE 135
+++D TC V +KH + + I+ G +H E ++ A +A G+ +IV+N +E
Sbjct: 94 SGAKVIDATCSRVKASQALAKKHSEEAFV-ILAGDKNHGELISIAGYAEGRCLIVQNAEE 152
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
A + D NGS+ V IA QTT+ E E I
Sbjct: 153 AALI-DLPSSLCANGSA--------------------------VLIA-QTTIKDSEYEAI 184
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
++K + FNTIC AT +RQ A+ K+ E VD +LV+GG NS+NT
Sbjct: 185 ASALKKRI----------SDLKVFNTICPATYDRQAALKKLAYE-VDALLVIGGKNSANT 233
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
L + A D PS+ I+ I P +Y + +G+T+GAST
Sbjct: 234 KRLFQTAVDTKKPSWLIEDASEI-PKEIFSYSV------------------VGLTAGAST 274
Query: 316 PDKAVEDVLKKVFE 329
PD +++V KK+ E
Sbjct: 275 PDFIIDEVEKKLLE 288
>gi|373853204|ref|ZP_09596003.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Opitutaceae
bacterium TAV5]
gi|372472731|gb|EHP32742.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Opitutaceae
bacterium TAV5]
Length = 301
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 131/275 (47%), Gaps = 31/275 (11%)
Query: 89 VSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKY---IIVKNMKEAEYVCDYILG 145
V KVW + + + YT IIHGK+ HEET AT + ++ +IV+++ E + + I
Sbjct: 3 VEKVWKAARSYGRDGYTIIIHGKHEHEETKATFANTRRHAPAVIVRDLAETRLLGEIIAS 62
Query: 146 GELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMR 205
+ + + F EKF ++ FD L +V + NQTT+L ET EI +
Sbjct: 63 RD----PAFRATFYEKFAGKHTEDFDVARHLDRVAVVNQTTLLVNETREIIAWLRDLYAA 118
Query: 206 KFG------VENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQ 259
FG + V + +T+C ATQ QDA+ + +++ +D +V+GG NSSNT L
Sbjct: 119 TFGPDIPGALPRVGRGGRT-DTLCYATQVNQDALGRALQKPLDAAIVIGGKNSSNTWQLY 177
Query: 260 EIAEDR-GIPSYWIDSEKRIGPGNKIAYKLMHGEL-------VEKENWLPKG-------- 303
+ E + G +++I SE+ I ++ + + E LP G
Sbjct: 178 RLCEQQLGPRAFFIQSERDIRSLAEVEHTVFATHQGANPAGGTEIRPLLPAGAPPHPSPG 237
Query: 304 -QITIGITSGASTPDKAVEDVLKKVFEIKREEALQ 337
+ + +T GAS PD ++ V+ ++ AL+
Sbjct: 238 HPLRVLVTGGASCPDGLIQQVITRINSFMPPGALR 272
>gi|288818544|ref|YP_003432892.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Hydrogenobacter
thermophilus TK-6]
gi|384129297|ref|YP_005511910.1| hydroxymethylbutenyl pyrophosphate reductase [Hydrogenobacter
thermophilus TK-6]
gi|288787944|dbj|BAI69691.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Hydrogenobacter
thermophilus TK-6]
gi|308752134|gb|ADO45617.1| hydroxymethylbutenyl pyrophosphate reductase [Hydrogenobacter
thermophilus TK-6]
Length = 301
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 141/325 (43%), Gaps = 77/325 (23%)
Query: 16 KIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLN 75
+++ +IHNP +RL + V+ + E D + GD V++ + G ++ L
Sbjct: 35 RVFTMGPLIHNPQEVERLRKKGVELLYTE------DALKSGDTVIIRSHGIPPKKERQLK 88
Query: 76 NKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKE 135
+ ++D TCP+V V +V K + Y ++ G+ SH E + T +
Sbjct: 89 ELGLNVMDATCPYVKAVHDAVVKLSQEGYFVVLVGEKSHPEVIGTLGYLE---------- 138
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
E G + E+F + K + K KVGI QTT
Sbjct: 139 -----------ESGGKGTVVESF-DDLKAVLGKD--------KVGIVAQTTQ-------- 170
Query: 196 GKLVEKTMMRKFGVENVNEHFI------SFNTICDATQERQDAMYKMVEEKVDLILVVGG 249
+F E V E I NTIC+AT ERQ+ +YK+ E VD+++++GG
Sbjct: 171 --------NEQFFKEVVGEIAIWAKEVKVINTICNATSERQEDVYKLAPE-VDVMIIIGG 221
Query: 250 WNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGI 309
NS NT L EI+ + SY I++ I P W G +GI
Sbjct: 222 KNSGNTRRLYEISRSLNLNSYHIETADDIKP-----------------EWFI-GVKRVGI 263
Query: 310 TSGASTPDKAVEDVLKKVFEIKREE 334
T+GASTPD + V++++ E+ +EE
Sbjct: 264 TAGASTPDWIINSVVERIREVSKEE 288
>gi|404495725|ref|YP_006719831.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [Geobacter
metallireducens GS-15]
gi|418066371|ref|ZP_12703735.1| hydroxymethylbutenyl pyrophosphate reductase [Geobacter
metallireducens RCH3]
gi|123572476|sp|Q39XB6.1|ISPH_GEOMG RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|78193341|gb|ABB31108.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [Geobacter
metallireducens GS-15]
gi|373560632|gb|EHP86889.1| hydroxymethylbutenyl pyrophosphate reductase [Geobacter
metallireducens RCH3]
Length = 282
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 149/328 (45%), Gaps = 73/328 (22%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+A+EA ++ E K + IIH+P V RLEEM V+ + K + G ++V +
Sbjct: 21 MAFEAAEK--EGKTYSLGPIIHSPQVVHRLEEMGVKVL------KGLGEITDGTIIVR-S 71
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
G EE+ K +++VD TCP+V K +V+ + Y ++ G H E S+
Sbjct: 72 HGVTSEELEEAVRKELEVVDATCPFVKKAQENVQNLSEAGYEVVVVGDADHPEVQGIVSY 131
Query: 124 A-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIA 182
A GK +V + +EA A L K KK +GI
Sbjct: 132 AKGKVCVVGSEEEA--------------------ARLPKMKK--------------IGIV 157
Query: 183 NQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVD 242
QTT ++ + K V +RK G E FNTICDAT RQ + VD
Sbjct: 158 AQTT----QSFDNLKHVVLECLRK-GAE-----IRIFNTICDATAVRQQEATALAR-TVD 206
Query: 243 LILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPK 302
++V+GG+NS+NT L E+ + ++ I++ + I P W +
Sbjct: 207 CMIVIGGYNSANTKRLAEVCAELQPRTHQIETAQEINPA-----------------WF-E 248
Query: 303 GQITIGITSGASTPDKAVEDVLKKVFEI 330
G +G+T+GASTP +++V++++ EI
Sbjct: 249 GVAKVGVTAGASTPKWLIDEVIERIREI 276
>gi|296133096|ref|YP_003640343.1| hydroxymethylbutenyl pyrophosphate reductase [Thermincola potens
JR]
gi|296031674|gb|ADG82442.1| hydroxymethylbutenyl pyrophosphate reductase [Thermincola potens
JR]
Length = 674
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 151/324 (46%), Gaps = 72/324 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I+ +IHNP V ++LE+ + I V E +++G +V+ + G A + + +
Sbjct: 33 IYTLGPLIHNPQVVQQLEQ---RGIKVAE---DLSDIHEGTLVIR-SHGVAPDVLEEAAS 85
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAG-KYIIVKNMKE 135
K +Q++D TCP+V K +K + ++ G H E + G + ++V+N +E
Sbjct: 86 KGLQVIDATCPFVKKAQELAKKMQAEGRLVVVIGDKKHPEVAGIIGWTGNRGVVVENPEE 145
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
AE + GS +G+ QTT + EE
Sbjct: 146 AEKI--------ETGSP--------------------------IGVVCQTTQPEQNFEET 171
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
++++ N ++ NTIC AT+ERQD+ V E VD+++V+GG NS+NT
Sbjct: 172 VRILQ----------NKGTDIVAHNTICHATRERQDSAIN-VAESVDVMIVIGGRNSANT 220
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
L + E+ G P+Y I++ + +++W KG +G+T+GAST
Sbjct: 221 KKLARLCEETGTPTYHIETAAEL-----------------QQDWF-KGAKKVGLTAGAST 262
Query: 316 PDKAVEDVLKKVFEI-KREEALQL 338
P +E+V +K+ E+ R+E + +
Sbjct: 263 PGWIIEEVKRKMEEMTNRDEGMNM 286
>gi|449130857|ref|ZP_21767076.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
denticola SP37]
gi|448941897|gb|EMB22797.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
denticola SP37]
Length = 289
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 140/314 (44%), Gaps = 62/314 (19%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
++ +IHNP+ RL++ V+ I E D K V+V+ A G + L
Sbjct: 36 LYTFGPLIHNPSTMLRLKQTGVKTIDTENFTGDEDY--KDSVIVIRAHGIPPSKKSELEK 93
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA-GKYIIVKNMKE 135
+++D TC V +KH + + I+ G +H E ++ A +A G+ +IV+N +E
Sbjct: 94 SGAKVIDATCSRVKASQALAKKHSEEAFV-ILAGDKNHGELISIAGYAEGRCLIVQNAEE 152
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
A + D NGS+ V IA QTT+ E E I
Sbjct: 153 AALI-DLPSSLRANGSA--------------------------VLIA-QTTIKDSEYEAI 184
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
++K + FNTIC AT +RQ A+ K+ E VD +LV+GG NS+NT
Sbjct: 185 ASALKKRI----------SDLKVFNTICPATYDRQAALKKLAYE-VDALLVIGGKNSANT 233
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
L + A D PS+ I+ I P +Y + +G+T+GAST
Sbjct: 234 KRLFQTAVDTKKPSWLIEDASEI-PKEIFSYSV------------------VGLTAGAST 274
Query: 316 PDKAVEDVLKKVFE 329
PD +++V KK+ E
Sbjct: 275 PDFIIDEVEKKLLE 288
>gi|257063683|ref|YP_003143355.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase [Slackia
heliotrinireducens DSM 20476]
gi|256791336|gb|ACV22006.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase [Slackia
heliotrinireducens DSM 20476]
Length = 276
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 141/312 (45%), Gaps = 72/312 (23%)
Query: 14 EEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVT 73
+E + +IHNP V +LE V+ + +G +Q D +V+L G
Sbjct: 30 DEDTFTLGPLIHNPQVVAKLESRGVRAV---DGPEQVD----HGIVILRTHGVEPHIAAD 82
Query: 74 LNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAG-KYIIVKN 132
L ++++ ++D TCP V+K S T +I G+ H E + +AG K I+V +
Sbjct: 83 LKSRDLTVIDATCPHVAKAQRSAANLADTCGTVLIIGRAEHPEIRSVREYAGEKAIVVAD 142
Query: 133 MKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGET 192
+ E LE+ VG+ QTT K
Sbjct: 143 VDEVP-------------------EHLEE----------------PVGVIVQTTESK--- 164
Query: 193 EEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNS 252
E++ +V + R GVE + NTIC AT++RQDA + +E VD ++V+GG NS
Sbjct: 165 EKLQAVVNELEAR--GVETQVK-----NTICFATRQRQDAAAALADE-VDAMVVIGGKNS 216
Query: 253 SNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSG 312
SNT+HL EI D SY++++++ + P +W +G+T+G
Sbjct: 217 SNTTHLYEICRDHCDRSYFVETKEELDP-----------------SWFSATD-RVGVTAG 258
Query: 313 ASTPDKAVEDVL 324
ASTPD +EDV+
Sbjct: 259 ASTPDYQIEDVI 270
>gi|325294238|ref|YP_004280752.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Desulfurobacterium thermolithotrophum DSM 11699]
gi|325064686|gb|ADY72693.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Desulfurobacterium thermolithotrophum DSM 11699]
Length = 299
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 141/313 (45%), Gaps = 71/313 (22%)
Query: 16 KIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLN 75
K++ E+IHN +RL+++ + I + DV+ KG+ V++ + G + + + L
Sbjct: 31 KVYCLGELIHNKREIERLKKLGIVFI------EDIDVLKKGNTVIIRSHGVSPKVIEFLK 84
Query: 76 NKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKE 135
K +QIVD TCP+V V V K +K Y +I G H E + A +I+ ++E
Sbjct: 85 RKGLQIVDATCPFVKDVHEKVMKLEKEGYPVLILGNPKHPEVIGIAGHVKSPMIMNTIEE 144
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTM-LKGETEE 194
+E+ K L K+G+ QTT+ + E
Sbjct: 145 -----------------------IERLPK-----------LSKLGVVCQTTLNMDFFREA 170
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
+ +L K K +NTIC AT RQ K+ + VD++L+VGG NSSN
Sbjct: 171 VFRLALKVKELKV-----------YNTICSATSIRQSEAKKLALQ-VDVMLIVGGRNSSN 218
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
T+ L +I++ SY I+S++ I W QI IGIT+GAS
Sbjct: 219 TTKLYQISKSVNSKSYHIESKEEI-----------------DSLWFENAQI-IGITAGAS 260
Query: 315 TPDKAVEDVLKKV 327
TP +E+V+ V
Sbjct: 261 TPQWVIEEVVNYV 273
>gi|322420781|ref|YP_004200004.1| hydroxymethylbutenyl pyrophosphate reductase [Geobacter sp. M18]
gi|320127168|gb|ADW14728.1| hydroxymethylbutenyl pyrophosphate reductase [Geobacter sp. M18]
Length = 282
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 144/318 (45%), Gaps = 70/318 (22%)
Query: 18 WITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNK 77
+ IIH+P V +RLEEM V+++ + + G V++ + G A EE+
Sbjct: 33 YTLGPIIHSPQVVQRLEEMGVKSV------EDVSEIENGGTVIIRSHGVAAEELEAAVRA 86
Query: 78 NVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA-GKYIIVKNMKEA 136
++++VD TCP+V K V K Y ++ G H E S+A G+ +V + ++
Sbjct: 87 SLEVVDATCPFVKKAQEHVATLSKEGYDVVVVGDAVHPEVQGIVSYATGRVYVVSSGRD- 145
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
+E+ + + K+G+ QTT E +
Sbjct: 146 ----------------------VERLPR-----------MAKMGVVAQTTQ---SFEHLN 169
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
++V + R G V +NTICDAT RQ+ K+ E VD ++V+GG+NS+NT
Sbjct: 170 EVVAACLARG-GETRV------YNTICDATAVRQEETKKLAGE-VDCMIVIGGFNSANTK 221
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L +I + ++ I++ +I P W +G +G+T+GASTP
Sbjct: 222 RLAQICRELLPRTHHIETAGQIDPA-----------------WF-EGVQRVGVTAGASTP 263
Query: 317 DKAVEDVLKKVFEIKREE 334
+++V +++ I R++
Sbjct: 264 KWLIDEVTERISAISRDK 281
>gi|188586255|ref|YP_001917800.1| hydroxymethylbutenyl pyrophosphate reductase [Natranaerobius
thermophilus JW/NM-WN-LF]
gi|179350942|gb|ACB85212.1| hydroxymethylbutenyl pyrophosphate reductase [Natranaerobius
thermophilus JW/NM-WN-LF]
Length = 705
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 146/322 (45%), Gaps = 67/322 (20%)
Query: 16 KIWITNEIIHNPTVNKRLEEMAV---QNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMV 72
+++ I+HN V + L E + +N+ + KK + VV+ + G E
Sbjct: 35 QVFTLGPIVHNKEVIQNLTEKGIGIIENLTQLQSKKCLSE-ETNNYVVIRSHGVGPETFK 93
Query: 73 TLNN-KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVK 131
LNN N ++D TCP+V KV K + Y I G +H E + IV
Sbjct: 94 MLNNLSNTDVIDATCPFVRKVQQKASKLYQDGYQIFIVGDPNHPEVKGIKEWTDNNAIV- 152
Query: 132 NMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGE 191
+++ E V D + K + QTT+ +
Sbjct: 153 -IEKPEQVNDIEISN-------------------------------KTAVVAQTTLRE-- 178
Query: 192 TEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWN 251
E+ ++VEK + R N + I NTICDATQ+RQ A ++ + VD+++VVGG+N
Sbjct: 179 -EKFNEIVEKILDR-------NPNTIVHNTICDATQKRQTATKELAGQ-VDVMIVVGGYN 229
Query: 252 SSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITS 311
SSNT L+E+A G+P+Y I++ K + K +W G IG+T+
Sbjct: 230 SSNTKKLKELAVKEGVPTYHIETAKEL-----------------KTDWFL-GCKKIGVTA 271
Query: 312 GASTPDKAVEDVLKKVFEIKRE 333
GASTPD +++V+ K+ E + +
Sbjct: 272 GASTPDWTIKEVVGKMREFEEQ 293
>gi|15828043|ref|NP_302306.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
leprae TN]
gi|221230520|ref|YP_002503936.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
leprae Br4923]
gi|4539094|emb|CAB39812.1| lytB homolog [Mycobacterium leprae]
gi|13093596|emb|CAC30893.1| LytB homolog [Mycobacterium leprae]
gi|219933627|emb|CAR72035.1| LytB homolog [Mycobacterium leprae Br4923]
Length = 335
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 145/318 (45%), Gaps = 67/318 (21%)
Query: 9 RKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAV 68
RK P +++ +EI+HN V + LE + VEE D V +G +V+ A G A
Sbjct: 52 RKYGP--PVYVRHEIVHNRHVVETLERAGA--VFVEE----TDYVPEGAIVIFSAHGVAP 103
Query: 69 EEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYI 128
+N++ +D TCP V+KV V++ + DY ++ G HEE +ATA A ++
Sbjct: 104 TVYAAAAERNLRTIDATCPLVTKVHNEVKRFARNDYDILLIGHEGHEEVIATAGEAPTHV 163
Query: 129 IVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTML 188
+ ++G ++ ++ + D KV +QTT+
Sbjct: 164 QL-----------------VDGLAAVQQVVVR--------------DENKVVWLSQTTL- 191
Query: 189 KGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVG 248
+E ++VE+ R +++ + IC ATQ RQ A+ M E +L++VVG
Sbjct: 192 --SVDETMRIVERLRQRFPKLQDPPS-----DDICYATQNRQVAVKAMAPE-CELVIVVG 243
Query: 249 GWNSSNTSHLQEIAEDRGI-PSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITI 307
NSSN+ L E+A G +Y +D K I P WL G T+
Sbjct: 244 SRNSSNSVRLVEVAMGSGAGAAYLVDWAKDIDPA-----------------WL-AGVTTV 285
Query: 308 GITSGASTPDKAVEDVLK 325
G+TSGAS PD V+ VLK
Sbjct: 286 GVTSGASVPDILVQGVLK 303
>gi|8928200|sp|Q9X781.2|ISPH_MYCLE RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
Length = 332
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 147/322 (45%), Gaps = 67/322 (20%)
Query: 9 RKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAV 68
RK P +++ +EI+HN V + LE + VEE D V +G +V+ A G A
Sbjct: 49 RKYGP--PVYVRHEIVHNRHVVETLERAGA--VFVEE----TDYVPEGAIVIFSAHGVAP 100
Query: 69 EEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYI 128
+N++ +D TCP V+KV V++ + DY ++ G HEE +ATA A ++
Sbjct: 101 TVYAAAAERNLRTIDATCPLVTKVHNEVKRFARNDYDILLIGHEGHEEVIATAGEAPTHV 160
Query: 129 IVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTML 188
+ ++G ++ ++ + D KV +QTT+
Sbjct: 161 QL-----------------VDGLAAVQQVVVR--------------DENKVVWLSQTTL- 188
Query: 189 KGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVG 248
+E ++VE+ R +++ + IC ATQ RQ A+ M E +L++VVG
Sbjct: 189 --SVDETMRIVERLRQRFPKLQDPPS-----DDICYATQNRQVAVKAMAPE-CELVIVVG 240
Query: 249 GWNSSNTSHLQEIAEDRGI-PSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITI 307
NSSN+ L E+A G +Y +D K I P WL G T+
Sbjct: 241 SRNSSNSVRLVEVAMGSGAGAAYLVDWAKDIDPA-----------------WL-AGVTTV 282
Query: 308 GITSGASTPDKAVEDVLKKVFE 329
G+TSGAS PD V+ VLK + E
Sbjct: 283 GVTSGASVPDILVQGVLKWLAE 304
>gi|145589911|ref|YP_001156508.1| hydroxymethylbutenyl pyrophosphate reductase [Polynucleobacter
necessarius subsp. asymbioticus QLW-P1DMWA-1]
gi|145048317|gb|ABP34944.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
Length = 311
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 149/327 (45%), Gaps = 67/327 (20%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
I EA +F I++ +EI+HN V L + + D V KG +VV A
Sbjct: 25 IVNEALTRF-GPPIYVRHEIVHNAYVVNELRNKGAVFV------DELDEVPKGGIVVFSA 77
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
G + E V + +Q+ D TCP V+KV V K K +T ++ G H E T
Sbjct: 78 HGVSQEVRVDAEERGLQVYDATCPLVTKVHLEVIKMCKEGFTVLMIGHAGHPEVEGT--- 134
Query: 124 AGKYIIVKNMKEAEYVCDYILGGE-LNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIA 182
+ +KE ++ + + + L +S K AF+
Sbjct: 135 ------MGQVKEGVFLIEKVSDVDTLTFPASEKIAFV----------------------- 165
Query: 183 NQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVD 242
QTT+ ET+EI + + +KF N+ + IC ATQ RQDA+ K + +V+
Sbjct: 166 TQTTLSVDETKEI----VEALTKKF--PNIVQP--RKQDICYATQNRQDAV-KFMAPQVE 216
Query: 243 LILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPK 302
L++VVG SSN++ L+E++E G+PSY +D+ +++ P W
Sbjct: 217 LVIVVGSAASSNSNRLRELSEKLGVPSYMVDAPEQLKP-----------------EWF-V 258
Query: 303 GQITIGITSGASTPDKAVEDVLKKVFE 329
G+ IG+T+GAS P+ + ++ K+ E
Sbjct: 259 GKKRIGLTAGASAPESLAQSIVNKIQE 285
>gi|332982232|ref|YP_004463673.1| hydroxymethylbutenyl pyrophosphate reductase [Mahella australiensis
50-1 BON]
gi|332699910|gb|AEE96851.1| hydroxymethylbutenyl pyrophosphate reductase [Mahella australiensis
50-1 BON]
Length = 718
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 154/329 (46%), Gaps = 71/329 (21%)
Query: 6 YEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFG 65
Y++ ++ E+I+ IIHNP V +E++A + + V D ++ G +V++ + G
Sbjct: 23 YKSIEEHRNERIYTLGPIIHNPQV---VEDLASKGVKV---LNNVDDIDDG-LVIIRSHG 75
Query: 66 AAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAG 125
A + L K+++ +D TCP+V++V VE++ + Y II G+ H E + T +
Sbjct: 76 AGPDVYERLKAKDLRFIDATCPYVARVHKKVEEYYRKGYQIIIAGEADHPEVIGTNGWCN 135
Query: 126 K-YIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQ 184
IIV ++ EA + P +D KV + Q
Sbjct: 136 NTAIIVNDVDEASRL--------------------------------PQLD--KVCVVAQ 161
Query: 185 TTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLI 244
TT+ + E+I K++ + VNE I FNTIC AT +RQ+ ++ + +
Sbjct: 162 TTLNGSKWEDILKIL---------LPKVNELQI-FNTICYATSQRQEEALQIAKLST-AV 210
Query: 245 LVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQ 304
+V+GG NSSNT L EI ++ I+S I +N K
Sbjct: 211 IVIGGRNSSNTRKLYEICCKVCDRAFLIESADEI------------------DNLSIKPD 252
Query: 305 ITIGITSGASTPDKAVEDVLKKVFEIKRE 333
+GIT+GASTPD +E+V+ K+ E+ ++
Sbjct: 253 DVVGITAGASTPDGIIEEVITKMEELNKD 281
>gi|313672061|ref|YP_004050172.1| hydroxymethylbutenyl pyrophosphate reductase [Calditerrivibrio
nitroreducens DSM 19672]
gi|312938817|gb|ADR18009.1| hydroxymethylbutenyl pyrophosphate reductase [Calditerrivibrio
nitroreducens DSM 19672]
Length = 282
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 142/310 (45%), Gaps = 70/310 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
++ IIHNP + + E+ Q + V E D +++G VVL + G +E+ L
Sbjct: 32 LYTLGPIIHNPQL---VNELKSQGVDVAEST---DDLSEGSTVVLRSHGVEKQELNILAK 85
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA-GKYIIVKNMKE 135
KN+ IVD TCP+V+K + K Y +I G+ H E AS+ G+Y IV
Sbjct: 86 KNIHIVDATCPYVNKAHSEAVNLSKDGYFVVIFGEKDHPEVKGIASYIEGEYTIV----- 140
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
SS +EA+ F++ K+G+ QTT K ++I
Sbjct: 141 ----------------SSPEEAYNIDFRE-------------KIGVVAQTTQEKAVFDKI 171
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
++ + R+ + N TIC+AT RQ+A K V E V+++ VVGG NS+NT
Sbjct: 172 VDIL-RNRCRELKISN---------TICNATTLRQNAARK-VAEMVEVMFVVGGKNSANT 220
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
L +I + ++ I++++ I I G +G+T+GAST
Sbjct: 221 RRLYKICSEICEKTFHIETKEEIDKSVLI------------------GVNKVGVTAGAST 262
Query: 316 PDKAVEDVLK 325
P ++DV++
Sbjct: 263 PKNIIDDVIE 272
>gi|410996382|gb|AFV97847.1| hypothetical protein B649_07675 [uncultured Sulfuricurvum sp.
RIFRC-1]
Length = 277
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 136/310 (43%), Gaps = 67/310 (21%)
Query: 23 IIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIV 82
+IHN RL+ N+ + E F V G+ V+ G +E+ TL+ + V +V
Sbjct: 34 LIHNANEIDRLKNDF--NVALSENLDSFKV---GETAVIRTHGIPKQELSTLHERQVNVV 88
Query: 83 DTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDY 142
D TCP+V+K E+ Y +I G +H E S+A ++ V N
Sbjct: 89 DATCPYVTKPQQICEEMSAQGYDIVIFGDEAHPEIKGVKSYADDHVYVVN---------- 138
Query: 143 ILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKT 202
S E K ++ KV QTT + EE ++V K
Sbjct: 139 ----------SLDELDALKLRE-------------KVATVAQTTR---KIEEYQQIVRKL 172
Query: 203 MMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIA 262
M + V FNTIC+AT + QDA+ + + K D+++V+GG NSSNT L IA
Sbjct: 173 MAKHKEVR-------VFNTICNATFDNQDAVRDLAQ-KADVMIVIGGKNSSNTKQLHSIA 224
Query: 263 EDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVED 322
++ SY I+S+ + +ENW GI++GASTPD +++
Sbjct: 225 KEYCSDSYHIESQDDL-----------------QENWFDTKTFC-GISAGASTPDWIIDE 266
Query: 323 VLKKVFEIKR 332
V+ K+ + R
Sbjct: 267 VVAKIKSLTR 276
>gi|320538471|ref|ZP_08038336.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
phagedenis F0421]
gi|320144688|gb|EFW36439.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
phagedenis F0421]
Length = 291
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 143/307 (46%), Gaps = 60/307 (19%)
Query: 23 IIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIV 82
+IHNP + L++ V+ + E + + G+ V++ A G + E+ L N ++V
Sbjct: 43 LIHNPATMRALQKEGVKILDPESFEPDSKLA--GNTVIIRAHGISPEKRAALENSGARLV 100
Query: 83 DTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDY 142
D TCP V +KH + I+ G +H E + A + V+++K
Sbjct: 101 DATCPRVVSSQMRAKKHAEKGLPVILAGDKNHGELIGIAGY------VRSVK-------- 146
Query: 143 ILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKT 202
G + G +T+E A FD D + + QTT+ + E I ++ +
Sbjct: 147 --GAQCFGVQNTEE--------AARLSFDAD----EAVLIAQTTIKQSEYNAIADVLRRK 192
Query: 203 MMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIA 262
+ ++ + NTIC AT+ERQ A+ K+ E VD +L++GG NS+NT L + A
Sbjct: 193 V----------KNLLVLNTICPATEERQIALKKLSLE-VDAVLIIGGKNSANTQRLLQTA 241
Query: 263 EDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVED 322
+D +P++ +++ K I P ++ ++GI++GASTPD ++
Sbjct: 242 KDIPLPAWLVETAKDI-PKEIYQFR------------------SVGISAGASTPDFIIDQ 282
Query: 323 VLKKVFE 329
V K + E
Sbjct: 283 VEKALRE 289
>gi|78355437|ref|YP_386886.1| hydroxymethylbutenyl pyrophosphate reductase [Desulfovibrio
alaskensis G20]
gi|123553378|sp|Q316F5.1|ISPH_DESDG RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|78217842|gb|ABB37191.1| hydroxymethylbutenyl pyrophosphate reductase [Desulfovibrio
alaskensis G20]
Length = 281
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 138/316 (43%), Gaps = 72/316 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNI--PVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTL 74
I IIHNP V +R E+ V+ P E G VV+ A G E L
Sbjct: 33 IATLGPIIHNPQVLRRYEQKGVRCYTDPAE--------ARSGQRVVIRAHGIPEETESAL 84
Query: 75 NNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGK-YIIVKNM 133
V +VD TCP V + + + ++ T ++ G++ H E S+AG+ ++ ++
Sbjct: 85 AAAGVDLVDATCPKVKRAQLGIARQREKGRTLLLFGEHDHPEVQGLLSYAGEGAVVFGSL 144
Query: 134 KEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETE 193
+E + NG + +A QTT K
Sbjct: 145 EELQ-----------NGPLEDDRHYF---------------------LAAQTTQDKHAFT 172
Query: 194 EIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSS 253
+ + V R+FG +H +TICDAT+ERQD + VD+++VVGG+ S
Sbjct: 173 SVIEWVR----RRFG-----DHVPVLDTICDATRERQDEAI-AIARSVDVMVVVGGFASG 222
Query: 254 NTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGA 313
NT L E+A+ +G+P+Y +++ ++ P + I +G G+T+GA
Sbjct: 223 NTRRLAEVAQAQGVPTYHVETPDQL-PLDAI-----------------RGYGAAGLTAGA 264
Query: 314 STPDKAVEDVLKKVFE 329
STP K++ D +K+ E
Sbjct: 265 STP-KSIIDETQKLLE 279
>gi|302391808|ref|YP_003827628.1| hydroxymethylbutenyl pyrophosphate reductase [Acetohalobium
arabaticum DSM 5501]
gi|302203885|gb|ADL12563.1| hydroxymethylbutenyl pyrophosphate reductase [Acetohalobium
arabaticum DSM 5501]
Length = 676
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 149/330 (45%), Gaps = 80/330 (24%)
Query: 14 EEKIWITNEIIHNPTVNKRLEEMAVQNIP----VEEGKKQFDVVNKGDVVVLPAFGAAVE 69
EEK +IHNP RL+E+ V + VEEG V++ + G E
Sbjct: 30 EEKTRTLGPLIHNPQAVDRLQELGVGIVDTIEEVEEG-----------TVIIRSHGVPPE 78
Query: 70 EMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYII 129
+ +K++ I+D TCP+V K + K + Y I+ G H E A
Sbjct: 79 VLAKAEDKDLNILDATCPFVKKAQENASKLYQEGYQVIVSGDKKHPEVTA---------- 128
Query: 130 VKNMKEAEYVCDYILGG-ELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTM- 187
ILG + +E LEK K ++ KVG+ QTT
Sbjct: 129 -------------ILGSTDHQAVVVEEEEDLEKLPK----------NMDKVGVIAQTTQS 165
Query: 188 LKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV 247
+K E + KL+++T E +NTIC T ERQ A K+ E V L++V+
Sbjct: 166 IKKFKELVTKLMDRT-----------EELKIYNTICTTTHERQAAAGKLAAE-VGLMIVI 213
Query: 248 GGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITI 307
GG+NS+NT+ L EI ++ G +Y +++ + + +W + +
Sbjct: 214 GGYNSANTNRLAEICDEAGAKTYHVETAEEL-----------------SRDWFYNIE-KV 255
Query: 308 GITSGASTPDKAVEDVLKKVFEIKREEALQ 337
G+T+GASTP+ +++V+ ++ +IK+EE ++
Sbjct: 256 GVTAGASTPNWIIKEVVSRMEDIKKEENVE 285
>gi|88813003|ref|ZP_01128246.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nitrococcus
mobilis Nb-231]
gi|88789781|gb|EAR20905.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nitrococcus
mobilis Nb-231]
Length = 325
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 141/313 (45%), Gaps = 58/313 (18%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN +V L + + ++ V G V+ A G +
Sbjct: 34 IYVRHEVVHNRSVVDDLRRKGARFV------EELSEVPDGSTVIFSAHGVSKAVRAEAAQ 87
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V+KH + I+ G H E T G+Y K A
Sbjct: 88 RGLRVFDATCPLVTKVHIEVQKHAREGREVILIGHDGHPEVAGTI---GQY----EGKGA 140
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
E Y++ G E + + D DL V +QTT+ + +
Sbjct: 141 ERGAIYLVQGP------------EDVESLTVRNAD---DLAYV---SQTTLSMDDAAQ-- 180
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
V + ++F + H + + IC ATQ RQDA+ + + VD+++VVG NSSNT
Sbjct: 181 --VIAALRQRF----PDIHGPTRDDICYATQNRQDAVMGLARQ-VDVMIVVGSGNSSNTR 233
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L+E+AE G+P+Y ID+ + WL +G+ IGIT+GAS P
Sbjct: 234 RLRELAERIGVPAYQIDTAADL-----------------DRRWL-EGREVIGITAGASAP 275
Query: 317 DKAVEDVLKKVFE 329
+ V+ V+ ++ E
Sbjct: 276 EILVQGVVDRLIE 288
>gi|452944236|ref|YP_007500401.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Hydrogenobaculum sp. HO]
gi|452882654|gb|AGG15358.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Hydrogenobaculum sp. HO]
Length = 286
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 141/313 (45%), Gaps = 77/313 (24%)
Query: 16 KIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDV-VNKGDVVVLPAFGAAVEEMVTL 74
+++ +IHNP RL M + K D ++K V++ + G + E+ L
Sbjct: 32 RVYTLGPLIHNPQEVNRLSNMGI--------KTATDTNIDKDATVIVRSHGISPEKERLL 83
Query: 75 NNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA----GKYIIV 130
N ++VD TCP+V V +V K Y +I G+ H E T + G+Y ++
Sbjct: 84 RNTFAKVVDATCPYVKAVHEAVVSLAKEGYFVVIVGEKDHPEVQGTVGYLEEAKGRYKVI 143
Query: 131 KNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKG 190
++++ E D+ KVGI QTT
Sbjct: 144 DSLEDLE-----------------------------------DIKEDKVGIVAQTTQ--- 165
Query: 191 ETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGW 250
EI E +++ +NV E + NTIC+AT+ERQ +Y++ VD+++++GG
Sbjct: 166 --NEI--FFENVVLKLL--KNVKELKV-INTICNATEERQSDIYELAP-TVDVMIIIGGK 217
Query: 251 NSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGIT 310
NS NT L EI++ SY I+++ I P +WL +G TIGI+
Sbjct: 218 NSGNTKRLFEISKSLNPRSYHIETKDEIDP-----------------SWL-EGAETIGIS 259
Query: 311 SGASTPDKAVEDV 323
+GASTPD +EDV
Sbjct: 260 AGASTPDWIIEDV 272
>gi|197119622|ref|YP_002140049.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [Geobacter
bemidjiensis Bem]
gi|226741034|sp|B5E9S9.1|ISPH_GEOBB RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|197088982|gb|ACH40253.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [Geobacter
bemidjiensis Bem]
Length = 283
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 144/318 (45%), Gaps = 70/318 (22%)
Query: 18 WITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNK 77
+ IIH+P V +RLEEM V IPV+ + V G +++ + G A EE+
Sbjct: 33 YTLGPIIHSPQVVQRLEEMGV--IPVDNVSE----VETGGTIIIRSHGVAAEELEAAVRA 86
Query: 78 NVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA-GKYIIVKNMKEA 136
N+++VD TCP+V K V K Y ++ G H E S+A G+ +V + K+
Sbjct: 87 NLEVVDATCPFVKKAQEHVATLSKEGYDIVVVGDAVHPEVQGIVSYAAGRVYVVSSHKD- 145
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
+E+ + + K+G+ QTT E +
Sbjct: 146 ----------------------VERLPR-----------MSKIGVVAQTTQ---SFEHLH 169
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
++V + R G V +NTICDAT RQ+ K+ VD ++V+GG+NS+NT
Sbjct: 170 EVVAACLARG-GEARV------YNTICDATAVRQEEAKKLAG-AVDCMVVIGGFNSANTM 221
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L +I + ++ +++ +I E W KG +G+T+GASTP
Sbjct: 222 RLAQICLELLPRTHHVETASQI-----------------DEQWF-KGVKKVGVTAGASTP 263
Query: 317 DKAVEDVLKKVFEIKREE 334
+++V+ ++ I +++
Sbjct: 264 KWIIDEVIDRISAIDKDK 281
>gi|300855310|ref|YP_003780294.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
ljungdahlii DSM 13528]
gi|300435425|gb|ADK15192.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
ljungdahlii DSM 13528]
Length = 637
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 156/335 (46%), Gaps = 77/335 (22%)
Query: 5 AYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAF 64
+ + +K+F +KI+ +IHN V +L+E + I ++ D + + DVV++ +
Sbjct: 22 SLKVQKKF-NKKIYTLGPLIHNSDVVNKLKEKGIYPIEID----NLDNLREDDVVIIRSH 76
Query: 65 GAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA 124
G + TL NK + IV+ TCP+V + V+++ K Y+ +I G +H E + +
Sbjct: 77 GVPEKIFFTLKNKKINIVNATCPYVLNIQRKVQEYYKLGYSILIVGDKNHPEVIGINGWC 136
Query: 125 -GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
K +I K+ G++ LEK K+ I +
Sbjct: 137 ENKALISKD-----------------GTN------LEKLPS-------------KLCIVS 160
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTT + E++ +V K + FI+FNTIC AT+ RQ A + +E VD+
Sbjct: 161 QTTEKQSNWEKVLSIVTKNC----------KEFIAFNTICSATEFRQKAAADISKE-VDM 209
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSE----KRIGPGNKIAYKLMHGELVEKENW 299
++V+GG NSSNT+ L EI +D + ++++ I NKI
Sbjct: 210 MVVIGGKNSSNTTKLYEICKDNCNNTIYVENSGEIPDDISNCNKIK-------------- 255
Query: 300 LPKGQITIGITSGASTPDKAVEDVLKKVFEIKREE 334
TIG+T+GASTPD +++ + K+ + K E
Sbjct: 256 ------TIGVTAGASTPDWIIKEAILKMSDDKNLE 284
>gi|220931888|ref|YP_002508796.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Halothermothrix
orenii H 168]
gi|219993198|gb|ACL69801.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Halothermothrix
orenii H 168]
Length = 678
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 145/322 (45%), Gaps = 71/322 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
++ +IHNP V KRL+EM ++++ D+++ G V+++ + G + +
Sbjct: 13 VYTLGPLIHNPQVVKRLKEMGIESL------DSLDIIDNG-VIIIRSHGVPPDIIEKARQ 65
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA-GKYIIVKNMKE 135
K + I+D TCP+V + Y +II G H E + A + II+ + KE
Sbjct: 66 KGLHIIDATCPYVKNAQKYARELVDKGYQTIIFGDRDHPEVIGINGAARNESIIISSEKE 125
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
+ ++N SS KVG+ QTT ++I
Sbjct: 126 IK---------DINLSS-------------------------KVGLIAQTTKSPASFQKI 151
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
+ + V E I +NTIC T+ RQ + + + VD + V+GG NS+NT
Sbjct: 152 VSYI---------LPEVKELRI-YNTICRTTETRQKSAVDLARQ-VDAMFVIGGKNSANT 200
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L E+ + G P+Y I++ +I ++ + K IGIT+GAST
Sbjct: 201 TRLAELCAETGTPTYHIET------AGEIDFRQL------------KSYNKIGITAGAST 242
Query: 316 PDKAVEDVLKKVFEIKREEALQ 337
PD +++V++ + E KR+ LQ
Sbjct: 243 PDWLIKEVIEAMSEEKRDAELQ 264
>gi|289209712|ref|YP_003461778.1| hydroxymethylbutenyl pyrophosphate reductase [Thioalkalivibrio sp.
K90mix]
gi|288945343|gb|ADC73042.1| hydroxymethylbutenyl pyrophosphate reductase [Thioalkalivibrio sp.
K90mix]
Length = 316
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 138/313 (44%), Gaps = 70/313 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +E++HN V RLE V+ + ++ D V G VV+ A G N
Sbjct: 35 LYVRHEVVHNRHVVGRLEAAGVKFV------EELDEVPDGQVVIFSAHGVPKRVQQEAEN 88
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATA-----SFAGKYIIVK 131
+ + + D TCP V+KV V ++ + ++ G H E T + G+ ++V+
Sbjct: 89 RGLTVFDATCPLVTKVHLEVARYAREGREVVLIGHAGHPEVEGTLGQFDDTQGGRMMLVE 148
Query: 132 NMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGE 191
+K+ + G E+ +PD ++ +QTT+ +
Sbjct: 149 TVKD-------VAGLEVA---------------------NPD----RLAFVSQTTLSMDD 176
Query: 192 TEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWN 251
T EI + + G ++ IC ATQ RQDA+ K + ++ DL+LVVG N
Sbjct: 177 TAEIIDALTARFPKIEGPRKMD--------ICYATQNRQDAV-KDLAKQCDLLLVVGSKN 227
Query: 252 SSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITS 311
SSN++ L EI G+ SY +D + P WL KG+ IG+T+
Sbjct: 228 SSNSNRLSEIGARLGVESYLVDGAADVDPA-----------------WL-KGKQRIGVTA 269
Query: 312 GASTPDKAVEDVL 324
GAS P+ V +VL
Sbjct: 270 GASAPEVLVNEVL 282
>gi|313682011|ref|YP_004059749.1| hydroxymethylbutenyl pyrophosphate reductase [Sulfuricurvum
kujiense DSM 16994]
gi|313154871|gb|ADR33549.1| hydroxymethylbutenyl pyrophosphate reductase [Sulfuricurvum
kujiense DSM 16994]
Length = 277
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 133/305 (43%), Gaps = 67/305 (21%)
Query: 23 IIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIV 82
+IHN RL+ N+ + E D GD V+ G +E+ TLN +NV ++
Sbjct: 34 LIHNANEIDRLKNDF--NVALSEN---LDSFRAGDTAVIRTHGIPKQELSTLNERNVNVI 88
Query: 83 DTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDY 142
D TCP+V+K E+ Y +I G SH E S+A + V N
Sbjct: 89 DATCPYVTKPQQICEEMSAQGYDIVIFGDESHPEIKGVKSYAIGNVFVVNSP-------- 140
Query: 143 ILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKT 202
E++G + + KV QTT + EE ++V K
Sbjct: 141 ---SEIDGLNLRE----------------------KVATVAQTTR---KIEEYQQIVGKL 172
Query: 203 MMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIA 262
M V FNTIC+AT + QDA+ + + K D+++V+GG NSSNT L IA
Sbjct: 173 MADHKEVR-------VFNTICNATFDNQDAVRDLAQ-KADVMIVIGGKNSSNTKQLHSIA 224
Query: 263 EDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVED 322
++ SY I+S+ + + W + + GI++GASTPD ++D
Sbjct: 225 KEYCQDSYHIESQNDL-----------------QSEWFSEKEFC-GISAGASTPDWIIDD 266
Query: 323 VLKKV 327
V+ K+
Sbjct: 267 VISKI 271
>gi|206889179|ref|YP_002249560.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Thermodesulfovibrio yellowstonii DSM 11347]
gi|206741117|gb|ACI20174.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Thermodesulfovibrio yellowstonii DSM 11347]
Length = 289
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 145/324 (44%), Gaps = 62/324 (19%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IA++ ++ ++ ++ IIHNP V +RL+++ V PV+E ++ +++ A
Sbjct: 23 IAFDVAQKH-KDGVFTLGPIIHNPQVVERLKDLGVY--PVDEISQK-----TIKTLIIRA 74
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
G E+ L + +I+D TCP+V K EK Y +I G H E S+
Sbjct: 75 HGIPKEKFNELKQLDCEIIDATCPFVKKAQNLAEKLASEGYQVLIIGDREHPEVKGIFSY 134
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
AG+ IV N + E S K L K K+GI
Sbjct: 135 AGEKAIVINHADNEL------------KESKKIPILNK----------------KIGIIQ 166
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTT + +EI M + N E FNT+C+ T R +A K+ +E VD+
Sbjct: 167 QTTQPMSKVKEI-------MNKIINSLNEFEEIRIFNTLCNFTSRRLEATEKVAKE-VDV 218
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++VVGG NS+NT+ L + G+ +Y I+ + I + W+
Sbjct: 219 MIVVGGKNSANTTQLANLCRKIGVKTYHIEDAQEID-----------------KKWVNSA 261
Query: 304 QITIGITSGASTPDKAVEDVLKKV 327
+ IG+T+GASTP +++V+ K+
Sbjct: 262 K-KIGVTAGASTPQWIIDEVIDKI 284
>gi|404493520|ref|YP_006717626.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [Pelobacter
carbinolicus DSM 2380]
gi|123573952|sp|Q3A3D3.1|ISPH_PELCD RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|77545562|gb|ABA89124.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [Pelobacter
carbinolicus DSM 2380]
Length = 279
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 153/333 (45%), Gaps = 78/333 (23%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+A++A +QF E I IIH+P V K+LEE ++ I ++ + ++ G V++ +
Sbjct: 21 LAFDAAEQF--EHICSLGPIIHSPQVVKKLEEKGIKVI------RKVEDIDHG-AVIIRS 71
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
G EE+ ++++ ++IVD TCP+V K Y+ ++ G+ H E S+
Sbjct: 72 HGITAEELDIIHDRELKIVDATCPFVKKAQDYATMLCNEGYSVVLVGEKDHPEVQGIISY 131
Query: 124 --AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGI 181
G+ +V + KEA+ + P+ K+GI
Sbjct: 132 TRGGEVFVVADCKEAQRL--------------------------------PNRP--KLGI 157
Query: 182 ANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKV 241
QTT ++I + ++ FNTICDAT RQ+ K+ E
Sbjct: 158 VAQTTQSFKNLQQIADICLGK----------SKEVRIFNTICDATSVRQNEARKIACE-A 206
Query: 242 DLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVE--KENW 299
DL+LVVGG+NS+NT+ L +I ++ I + H E VE ++ W
Sbjct: 207 DLMLVVGGFNSANTTRLAQICQE-------------------IQPRTFHVETVEQIQDGW 247
Query: 300 LPKGQITIGITSGASTPDKAVEDVLKKVFEIKR 332
+G +GIT+GASTP ++ V+++V ++ +
Sbjct: 248 F-EGVECVGITAGASTPRWIIDQVVERVSDMSK 279
>gi|183980308|ref|YP_001848599.1| LytB-related protein LytB2 [Mycobacterium marinum M]
gi|183173634|gb|ACC38744.1| LytB-related protein LytB2 [Mycobacterium marinum M]
Length = 333
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 130/310 (41%), Gaps = 62/310 (20%)
Query: 16 KIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLN 75
+++ +I+HN TV L++ I V+E + D G VVV A G + N
Sbjct: 53 PVYVRKQIVHNRTVVAELQDRGA--IFVDELDEIPDPPAPGAVVVFSAHGVSPAVRAAAN 110
Query: 76 NKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA-GKYIIVKNMK 134
+ +++VD TCP V+KV + T ++ G HEET T A ++V+N
Sbjct: 111 GRGLEVVDATCPLVTKVHAEAARFAGRGDTVLLIGHLGHEETDGTLGVAPNSMLLVQNAD 170
Query: 135 EAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEE 194
+ EL+ + ++L QTT+ ET +
Sbjct: 171 DVT---------ELDLPEDAQVSYL-----------------------TQTTLAVDETTD 198
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
+ + K + E E IC AT RQ A+ +V + D +LVVG NSSN
Sbjct: 199 VIDALRKRFPKL--AEPPTED------ICYATTNRQRAVEAIVR-RCDALLVVGSQNSSN 249
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
+ L E+A RG P+Y ID I P +WL TIGIT+GAS
Sbjct: 250 SQRLVELARRRGTPAYLIDGPTDIDP-----------------HWL-DSTATIGITAGAS 291
Query: 315 TPDKAVEDVL 324
P + VE V+
Sbjct: 292 APPRLVEQVI 301
>gi|163781892|ref|ZP_02176892.1| LytB protein [Hydrogenivirga sp. 128-5-R1-1]
gi|159883112|gb|EDP76616.1| LytB protein [Hydrogenivirga sp. 128-5-R1-1]
Length = 291
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 144/323 (44%), Gaps = 76/323 (23%)
Query: 16 KIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLN 75
+++ IIHNP RL+ M V+ + EE ++GD +++ + G + L
Sbjct: 35 RVFTLGPIIHNPQEVGRLKSMGVKPLEDEEP-------HEGDAIIIRSHGIPPDRERELR 87
Query: 76 NKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA----GKYIIVK 131
+K +Q++D TCP+V V +V K + Y ++ G+ +H E + T + G+ ++V+
Sbjct: 88 SKGLQVIDATCPYVKAVHDAVCKLAEEGYFIVLVGEKNHPEVIGTLGYLKECKGEGVVVE 147
Query: 132 NMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTML-KG 190
+M + E P + KVG+ +QTT K
Sbjct: 148 SMDDLE----------------------------------PVLKHEKVGVVSQTTQSEKF 173
Query: 191 ETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGW 250
E +G+L K NTIC+AT RQ+ +Y++ + VD+++++GG
Sbjct: 174 FKEVVGELALWAKELKV-----------INTICNATSVRQEDVYQLAPQ-VDVMIIIGGK 221
Query: 251 NSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGIT 310
NS NT L IA SY I++ + + K W +G +GIT
Sbjct: 222 NSGNTRRLYNIARSLNENSYHIETPEEL-----------------KSEWF-EGVKRVGIT 263
Query: 311 SGASTPDKAVEDVLKKVFEIKRE 333
+GASTP +E V K+ EI RE
Sbjct: 264 AGASTPSWIIESVRSKIEEICRE 286
>gi|383812824|ref|ZP_09968251.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Serratia sp.
M24T3]
gi|383298234|gb|EIC86541.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Serratia sp.
M24T3]
Length = 316
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 141/311 (45%), Gaps = 61/311 (19%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L + I +Q V G +++ A G + +
Sbjct: 33 IYVRHEVVHNRYVVDSLRQRGAVFI------EQISEVPDGSILIFSAHGVSQAVRTEAKS 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++ + D TCP V+KV V + + +I+ G H E T G+Y N K
Sbjct: 87 RDLTVFDATCPLVTKVHMEVARASRKGTEAILIGHAGHPEVEGTM---GQY---NNPKGG 140
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
Y+ E+ + FK V DP+ + QTT+ +T E+
Sbjct: 141 MYLV---------------ESPADVFKLDVK---DPE----NLCFMTQTTLSVDDTSEVI 178
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+ + + G + IC AT RQ+A+ + +E D++LVVG NSSN++
Sbjct: 179 DALRERFPKIVGPRK--------DDICYATTNRQEAVRNLSDE-ADVVLVVGSKNSSNSN 229
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L E+A+ G PSY IDS + I KE W+ KG I++G+T+GAS P
Sbjct: 230 RLAELAQRVGKPSYLIDSAEDI-----------------KEEWV-KGAISVGVTAGASAP 271
Query: 317 DKAVEDVLKKV 327
D V++V++++
Sbjct: 272 DILVQEVIERL 282
>gi|227548173|ref|ZP_03978222.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Corynebacterium
lipophiloflavum DSM 44291]
gi|227079734|gb|EEI17697.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Corynebacterium
lipophiloflavum DSM 44291]
Length = 317
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/310 (31%), Positives = 144/310 (46%), Gaps = 64/310 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +I+HN V + LEE V I VEE D V +G +V A G + +
Sbjct: 38 VYVRKQIVHNKYVVETLEERGV--IFVEET----DEVPEGAHLVFSAHGISPAVRESAIQ 91
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+N+ +D TCP V+KV ++ + Y ++ G HEE TA EA
Sbjct: 92 RNLLTLDATCPLVTKVHNEAKRFARDGYQILLVGHEGHEEVEGTAG------------EA 139
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
V + G L+G +S + F PD LV + +QTT+ ET EI
Sbjct: 140 PEVTHLVDG--LDGVASLPD-------------FGPDQKLVWL---SQTTLSVDETMEI- 180
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
V K R +EN + IC ATQ RQ A+ K + K DL++VVG NSSN+
Sbjct: 181 --VNKLFERFPHLENPPS-----DDICYATQNRQVAV-KAIAPKCDLVIVVGSQNSSNSK 232
Query: 257 HLQEIAEDRGI-PSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
L E+A + G SY +D + I E+WL +G +T+G+TSGAS
Sbjct: 233 RLVEVALEAGAKASYLVDFAREI-----------------DESWL-EGVMTVGVTSGASV 274
Query: 316 PDKAVEDVLK 325
P+ V +VL+
Sbjct: 275 PEILVREVLE 284
>gi|189485664|ref|YP_001956605.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [uncultured
Termite group 1 bacterium phylotype Rs-D17]
gi|170287623|dbj|BAG14144.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [uncultured
Termite group 1 bacterium phylotype Rs-D17]
Length = 300
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 152/331 (45%), Gaps = 78/331 (23%)
Query: 14 EEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVT 73
E K++ +IHNP KRLE+ ++ + ++ KK K ++L G
Sbjct: 35 ERKVYTLGPVIHNPQEVKRLEKKGIKTL--KDPKKV-----KSGSIILRTHGIPCNLHKK 87
Query: 74 LN-NKNVQIVDTTCPWVSKVWTSVEKH----KKGDYTSIIHGKYSHEETVATASF-AGKY 127
L NKN+ ++D CP+V + ++++ K D T I+ G+ H E +A S+ +GK
Sbjct: 88 LEENKNINVIDAACPFVKRAQNTIKRLSTDIKSKDKTIIVVGEKIHPEVIALVSYGSGKC 147
Query: 128 IIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTM 187
IIV+N+KEA+ + G+LN I +QTT
Sbjct: 148 IIVENIKEAQ---KFRGRGDLN-------------------------------IVSQTTQ 173
Query: 188 LKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV 247
I K+++K K +NTIC AT +RQ A K+ + VDL++V+
Sbjct: 174 TPENFNSIIKVLKKRYKTKV-----------YNTICKATLDRQKAAEKLAKN-VDLMIVI 221
Query: 248 GGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITI 307
GG NS NT+ L +I ++ +Y I++ I KE W K ++
Sbjct: 222 GGKNSGNTTRLAQICSEK-TKTYHIETACSI-----------------KEKWF-KNINSV 262
Query: 308 GITSGASTPDKAVEDVLKKVFEIKREEALQL 338
G+T+GASTPD ++++ ++ E+ + L+
Sbjct: 263 GLTAGASTPDWIIKEIEMRIKEVGAKHYLEF 293
>gi|291276297|ref|YP_003516069.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
mustelae 12198]
gi|290963491|emb|CBG39321.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase LytB
[Helicobacter mustelae 12198]
Length = 274
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 141/311 (45%), Gaps = 73/311 (23%)
Query: 23 IIHNPTVNKRLEE---MAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 79
+IHNP KRLE+ + ++N + + V +G V++ G +++ L +KN
Sbjct: 34 LIHNPREIKRLEDGFGVRIEN--------KTENVFEGQSVIIRTHGITKQDLEILKSKNT 85
Query: 80 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYV 139
+I D TCP+V K E K Y +I G SH E S+A IV N E Y
Sbjct: 86 KITDATCPFVIKPQQIAESMSKEGYCIVIFGDASHPEIQGVMSYAVSEPIVVNTLEGLY- 144
Query: 140 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 199
D LG KV + +QTT +++ K +
Sbjct: 145 -DKTLGK-------------------------------KVALISQTT------KQMKKFL 166
Query: 200 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQ 259
E + + ++N E I FNTIC+AT + Q+A+ ++ +E VD+++VVGG SSNT L
Sbjct: 167 E---IANYLMQNCYETRI-FNTICNATFDNQEAVKELSQE-VDIMIVVGGKTSSNTKQLL 221
Query: 260 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 319
IA+ SY ++ E+ + K W G+ GIT+GASTPD
Sbjct: 222 TIAQMYCKDSYLVEDERDL-----------------KMQWFA-GKKICGITAGASTPDWI 263
Query: 320 VEDVLKKVFEI 330
+E V K+ +I
Sbjct: 264 IERVQDKIAQI 274
>gi|451948858|ref|YP_007469453.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Desulfocapsa sulfexigens DSM 10523]
gi|451908206|gb|AGF79800.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Desulfocapsa sulfexigens DSM 10523]
Length = 311
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 137/310 (44%), Gaps = 67/310 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V + LE M V + D+ K + + A G +VE +
Sbjct: 38 IYVLHEIVHNKHVVQELENMGVIFV-----NDLVDIPRKA-ICIFSAHGVSVETEMRAKT 91
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATAS-FAGKYIIVKNMKE 135
++ +D TCP V V VEK+ Y +I G ++H E TA G +V + E
Sbjct: 92 LGLRTIDGTCPLVWSVHNMVEKYYADGYDVMIIGHHNHPEVEGTAGRVLGNVHVVASEDE 151
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
A G E+ DPD +V QTT+ + + I
Sbjct: 152 AR-------GVEVQ---------------------DPD----RVAYVTQTTLSQNDIAGI 179
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
++ +F N+ + IC AT RQ+AM K + E D++LVVG NSSN+
Sbjct: 180 ----RDVLLSRF--PNIKGQK---SNICYATLNRQEAMRK-IGESCDILLVVGSKNSSNS 229
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L+E+ E G+ Y ID E I + WL KG TI IT+GAS
Sbjct: 230 NRLREVGERAGMRGYLIDDESDI-----------------EMKWL-KGVSTICITAGASA 271
Query: 316 PDKAVEDVLK 325
P++ V+DV+K
Sbjct: 272 PERLVQDVIK 281
>gi|254447627|ref|ZP_05061093.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [gamma
proteobacterium HTCC5015]
gi|198262970|gb|EDY87249.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [gamma
proteobacterium HTCC5015]
Length = 326
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/325 (30%), Positives = 143/325 (44%), Gaps = 68/325 (20%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
I A + FP I++ +E++HN V L E I VEE V V+ A
Sbjct: 28 IVERALEHFPP-PIYVRHEVVHNKYVVDDLREKGA--IFVEE----LHEVPDDSTVIFSA 80
Query: 64 FGA--AVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATA 121
G AVEE + +Q+ D TCP V+KV V ++ K + I+ G H E T
Sbjct: 81 HGVSRAVEE--EAERRGLQVFDATCPLVTKVHMEVARYSKKNKEVIMIGHEGHPEVEGTM 138
Query: 122 SFAGKYIIVKNMKEAEYV--CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKV 179
G+YI E V + +L E+N DPD +
Sbjct: 139 ---GRYIKSGGKGEMYLVESPEDVLALEVN---------------------DPD----NL 170
Query: 180 GIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEE 239
QTT+ +T E V + + RKF + IC ATQ RQDA+ MV++
Sbjct: 171 AFVTQTTLSMDDTSE----VIEALQRKFPKLDSPRK----EDICYATQNRQDAIKSMVKQ 222
Query: 240 KVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENW 299
DL+LVVG NSSN+ L EI G+ SY +D++ I P +W
Sbjct: 223 -CDLLLVVGSKNSSNSKRLVEIGLKNGVDSYLVDNKSEIDP-----------------DW 264
Query: 300 LPKGQITIGITSGASTPDKAVEDVL 324
L +G+ ++G++SGAS P+ V +VL
Sbjct: 265 L-EGKRSVGLSSGASAPEVLVREVL 288
>gi|386816625|ref|ZP_10103843.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Thiothrix nivea
DSM 5205]
gi|386421201|gb|EIJ35036.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Thiothrix nivea
DSM 5205]
Length = 312
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 139/308 (45%), Gaps = 60/308 (19%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ NE++HN V L + + ++ D V V+ A G +
Sbjct: 33 VYVRNEVVHNRFVVNNLRDKGAVFV------QELDEVPDDATVIFSAHGVSRAVQEEAKR 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V ++ + +I+ G +H E T G+Y
Sbjct: 87 RGLKVFDATCPLVTKVHIEVTRYSREGRETILIGHKNHPEVEGTM---GQY--------- 134
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
D LGG + S +E A +PD K+ QTT+ ++
Sbjct: 135 ----DTSLGGAVYRVDSPEEV-------AELHVNNPD----KLAFVTQTTL---SVDDAS 176
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+++ R + + + IC ATQ RQDA+ K+ +E DLILVVG NSSN++
Sbjct: 177 IVIDALRARFPAIIGPKK-----DDICYATQNRQDALKKLADES-DLILVVGSPNSSNSN 230
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L+EIAE RG +Y ID + I ++ WL +G+ +IG+T+GAS P
Sbjct: 231 RLREIAEKRGTTAYLIDGAEDI-----------------RDEWL-QGKRSIGVTAGASAP 272
Query: 317 DKAVEDVL 324
+ VE V+
Sbjct: 273 EVLVEGVI 280
>gi|405983426|ref|ZP_11041732.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Slackia
piriformis YIT 12062]
gi|404389032|gb|EJZ84113.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Slackia
piriformis YIT 12062]
Length = 275
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 138/313 (44%), Gaps = 72/313 (23%)
Query: 14 EEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVT 73
E+ + +IHNP V + L E V E + D + +G +VV+ + G + +
Sbjct: 29 EDNTYTLGPLIHNPKVVEELRERGV------EVAESVDDLEEG-IVVIRSHGVEPQVLSA 81
Query: 74 LNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAG-KYIIVKN 132
L K + ++D TCP V+K S + + T I+ G+ H E AG + ++V +
Sbjct: 82 LREKGLTVIDATCPHVAKAQRSAGELRNAGGTVIVIGRSEHPEVKGLCGHAGPRAVVVAD 141
Query: 133 MKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGET 192
E PD VGI QTT K
Sbjct: 142 ASEL-----------------------------------PDTLEEPVGIVVQTTESK--- 163
Query: 193 EEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNS 252
E++ +VE R F E NTIC AT++RQ++ + EE VD I+V+GG NS
Sbjct: 164 EKLDAVVEAVRARGFEPE-------VKNTICFATRQRQNSAAALAEE-VDAIVVIGGKNS 215
Query: 253 SNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSG 312
SNT+HL I + S++++S + E ++ L +G T+G+T+G
Sbjct: 216 SNTTHLFNICKAHCDRSFFVESAE------------------ELDSSLFEGCETVGVTAG 257
Query: 313 ASTPDKAVEDVLK 325
ASTPD ++ V++
Sbjct: 258 ASTPDDQIQAVVE 270
>gi|348172751|ref|ZP_08879645.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Saccharopolyspora spinosa NRRL 18395]
Length = 310
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 131/314 (41%), Gaps = 66/314 (21%)
Query: 14 EEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVT 73
E I++ +I+HN V + LEE + + D V G V A G A
Sbjct: 16 EAPIFVRKQIVHNTHVVRDLEERGAVFV------DELDEVPVGATAVFSAHGVAPAVREQ 69
Query: 74 LNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNM 133
+ +++VD TCP V+KV + + + T + G HEE+ T A + I +
Sbjct: 70 AQQRQLRVVDATCPLVTKVHSEARRFAERGDTIVFIGHAGHEESEGTLGEAPQQI---RL 126
Query: 134 KEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETE 193
E E D + E++G V QTT+ +
Sbjct: 127 VETEDDIDAL---EIDG---------------------------PVSYLTQTTL---AVD 153
Query: 194 EIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSS 253
E +LV++ R + N + IC AT RQDA+ + + + DLI+VVG NSS
Sbjct: 154 EANRLVQRLRARFPHLTGPNS-----DDICYATTNRQDAL-RTIAAQADLIVVVGSANSS 207
Query: 254 NTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGA 313
N+ L E+AE G P++ ID + P WL + TIGIT+GA
Sbjct: 208 NSVRLVEVAERMGTPAFLIDDVSDVDP-----------------RWLADAR-TIGITAGA 249
Query: 314 STPDKAVEDVLKKV 327
S P + V D+L +
Sbjct: 250 SAPPQLVSDLLDAL 263
>gi|116696105|ref|YP_841681.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ralstonia
eutropha H16]
gi|113530604|emb|CAJ96951.1| drug tolerance protein [Ralstonia eutropha H16]
Length = 337
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 140/317 (44%), Gaps = 70/317 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V + L++ + + ++ D V G V + A G + E + +
Sbjct: 33 VFVRHEIVHNKHVVEGLKDKGARFV------EELDEVPTGAVTIFSAHGVSREVIADASQ 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKE 135
+ + +D TCP V KV T ++ T I+ G H E T GK I+V+N E
Sbjct: 87 RQLHAIDATCPLVIKVHTQGRQYAASGRTVILIGHAGHPEVEGTMGQIPGKVILVQN--E 144
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
AE +L+ + T A++ QTT+ +T I
Sbjct: 145 AEV-------AQLDLPADTPVAYV-----------------------TQTTLSVDDTRNI 174
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNT--ICDATQERQDAMYKMVEEKVDLILVVGGWNSS 253
+ R+F + + +T IC ATQ RQ A+ + + D+ILV+G NSS
Sbjct: 175 ----IAALGRRF------SNLVGPDTRDICYATQNRQSAVRDLCK-LADVILVIGATNSS 223
Query: 254 NTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGA 313
N++ L+EI + G+PSY I + P W+ + +GIT+GA
Sbjct: 224 NSNRLREIGTESGVPSYLIAEGAELDPA-----------------WVRDANV-VGITAGA 265
Query: 314 STPDKAVEDVLKKVFEI 330
S P++ VEDV+ + +
Sbjct: 266 SAPEEMVEDVINALRRL 282
>gi|339323441|ref|YP_004682335.1| dihydroflavonol-4-reductase DfrA [Cupriavidus necator N-1]
gi|338170049|gb|AEI81103.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase IspH
[Cupriavidus necator N-1]
Length = 337
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 140/317 (44%), Gaps = 70/317 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V + L++ + + ++ D V G V + A G + E + +
Sbjct: 33 VFVRHEIVHNKHVVEGLKDNGARFV------EELDEVPTGAVTIFSAHGVSREVIADASQ 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKE 135
+ + +D TCP V KV T ++ T I+ G H E T GK I+V+N E
Sbjct: 87 RQLHAIDATCPLVIKVHTQGRQYAASGRTVILIGHAGHPEVEGTMGQIPGKVILVQN--E 144
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
AE +L+ + T A++ QTT+ +T I
Sbjct: 145 AEV-------AQLDLPADTPVAYV-----------------------TQTTLSVDDTRNI 174
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNT--ICDATQERQDAMYKMVEEKVDLILVVGGWNSS 253
+ R+F + + +T IC ATQ RQ A+ + + D+ILV+G NSS
Sbjct: 175 ----IAALGRRF------SNLVGPDTRDICYATQNRQSAVRDLCK-LADVILVIGATNSS 223
Query: 254 NTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGA 313
N++ L+EI + G+PSY I + P W+ + +GIT+GA
Sbjct: 224 NSNRLREIGTESGVPSYLIAEGSELDPA-----------------WVRNANV-VGITAGA 265
Query: 314 STPDKAVEDVLKKVFEI 330
S P++ VEDV+ + +
Sbjct: 266 SAPEEMVEDVINALRRL 282
>gi|195953422|ref|YP_002121712.1| hydroxymethylbutenyl pyrophosphate reductase [Hydrogenobaculum sp.
Y04AAS1]
gi|195933034|gb|ACG57734.1| hydroxymethylbutenyl pyrophosphate reductase [Hydrogenobaculum sp.
Y04AAS1]
Length = 286
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 141/325 (43%), Gaps = 77/325 (23%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDV-VNKGDVVVLP 62
I R +EKI+ +IHNP RL M + K D ++K V++
Sbjct: 20 ITLAERAAKEQEKIYTLGPLIHNPQEVNRLSNMGI--------KTATDTNIDKDATVIVR 71
Query: 63 AFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATAS 122
+ G + E+ L N V++VD TCP+V V +V K Y +I G+ H E T
Sbjct: 72 SHGISPEKERLLRNTFVKVVDATCPYVKAVHEAVVSLAKEGYFVVIVGEKDHPEVQGTVG 131
Query: 123 F----AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVK 178
+ G+Y ++ ++++ E D+ K
Sbjct: 132 YLEEAKGRYKVIDSLEDLE-----------------------------------DIKEDK 156
Query: 179 VGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVE 238
VGI QTT + E + + K + NTIC+AT+ERQ +Y++
Sbjct: 157 VGIVAQTTQNEIFFENVVLKLLKKVK----------EIKVINTICNATEERQSDIYELAP 206
Query: 239 EKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKEN 298
VD+++++GG NS NT L EI++ SY I+++ I P +
Sbjct: 207 -IVDVMIIIGGKNSGNTKRLFEISKSLNPRSYHIETKDEIDP-----------------S 248
Query: 299 WLPKGQITIGITSGASTPDKAVEDV 323
WL +G TIGI++GASTPD +EDV
Sbjct: 249 WL-EGAKTIGISAGASTPDWIIEDV 272
>gi|114320015|ref|YP_741698.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Alkalilimnicola
ehrlichii MLHE-1]
gi|114226409|gb|ABI56208.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Alkalilimnicola
ehrlichii MLHE-1]
Length = 316
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 141/317 (44%), Gaps = 70/317 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L + + VEE D V G V+ A G +
Sbjct: 34 IYVRHEVVHNRYVVNNLRDKGA--VFVEE----LDEVPDGATVIFSAHGVSQAVRREAER 87
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +Q+ D TCP V+KV V+K+ + ++ G H E T G+Y
Sbjct: 88 RGLQVFDATCPLVTKVHMEVQKYAREGREVVLIGHAGHPEVEGTI---GQY--------- 135
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGF-DPDVDLVKVGIANQTTMLKGETEEI 195
E G + +EK + + DPD + QTT+ +T +
Sbjct: 136 ----------ERQGGAGGDIYLVEKPEDVQALVVRDPD----SLAFVTQTTLSMDDTANV 181
Query: 196 GKLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGGW 250
++ + E F + N IC ATQ RQDA+ K + E+VDL+LVVG
Sbjct: 182 -------------IDALRERFPNITGPRKNDICYATQNRQDAV-KQLAEQVDLMLVVGSP 227
Query: 251 NSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGIT 310
NSSN++ L+E+AE +G+ ++ +D +++ + WL +G+ IG+T
Sbjct: 228 NSSNSNRLRELAERKGVEAHLVDGPEQL-----------------QRAWL-EGRHAIGVT 269
Query: 311 SGASTPDKAVEDVLKKV 327
+GAS P+ V VL ++
Sbjct: 270 AGASAPEVLVRQVLDQL 286
>gi|148263532|ref|YP_001230238.1| hydroxymethylbutenyl pyrophosphate reductase [Geobacter
uraniireducens Rf4]
gi|189045809|sp|A5GE10.1|ISPH_GEOUR RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|146397032|gb|ABQ25665.1| hydroxymethylbutenyl pyrophosphate reductase [Geobacter
uraniireducens Rf4]
Length = 282
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 146/319 (45%), Gaps = 69/319 (21%)
Query: 16 KIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLN 75
K + IIH+P V ++LEEM V+ + K ++ G +++ + G A E+
Sbjct: 31 KTYTLGPIIHSPQVVQKLEEMGVKAL------KDISGMDDG-TIIIRSHGVASGELEEAV 83
Query: 76 NKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKE 135
K ++IVD TCP+V K VE + Y ++ G H E S+A +
Sbjct: 84 RKELEIVDATCPFVKKAQEHVESLSQAGYDVVVVGDADHPEVQGIVSYASGKV------- 136
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
Y++G S + A L K + K+G+ QTT ++ E
Sbjct: 137 ------YVVG------SGDEAAKLPK--------------MAKIGVVAQTT----QSFEN 166
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
K V + K G V F+TICDAT RQ+ K + +VD ++V+GG+NS+NT
Sbjct: 167 LKNVVDACLTKGGEIRV------FHTICDATAVRQEEA-KELASQVDCMIVIGGYNSANT 219
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
L E+ + +Y I+ +++ P W +G +G+T+GAST
Sbjct: 220 KRLAEVCTELQPRTYHIEMAQQLNP-----------------RWF-EGVGKVGVTAGAST 261
Query: 316 PDKAVEDVLKKVFEIKREE 334
P +++VL+++ +I +++
Sbjct: 262 PKWLIDEVLEQIEKINKDK 280
>gi|183984326|ref|YP_001852617.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
marinum M]
gi|183177652|gb|ACC42762.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase IspH
[Mycobacterium marinum M]
Length = 332
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 140/319 (43%), Gaps = 75/319 (23%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V L + + VEE D V +G +VV A G A
Sbjct: 55 VYVRHEIVHNRHVVDTLAKAGA--VFVEE----TDQVPEGAIVVFSAHGVAPTVYAAAAE 108
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYI-IVKNMKE 135
+N+Q +D TCP V+KV + + DY ++ G HEE V TA A +++ +V +
Sbjct: 109 RNLQTIDATCPLVTKVHNEARRFARNDYDILLIGHEGHEEVVGTAGEAPEHVQLVDGLDG 168
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
AE V D KV +QTT+ ET EI
Sbjct: 169 AERVTIR--------------------------------DEEKVVWLSQTTLSVDETMEI 196
Query: 196 GKLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGGW 250
V + + F + IC ATQ RQ A+ M E DL+LVVG
Sbjct: 197 -------------VARLRQRFPKLQDPPSDDICYATQNRQVAVKAMAPE-CDLVLVVGSR 242
Query: 251 NSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGIT 310
NSSN+ L E+A +G G + AY + + ++ ++WL +G T+G+T
Sbjct: 243 NSSNSVRLVEVA---------------LGAGAQAAYLVDWADDID-QSWL-QGVTTVGVT 285
Query: 311 SGASTPDKAVEDVLKKVFE 329
SGAS P+ V VL+++ E
Sbjct: 286 SGASVPEVLVRGVLERLAE 304
>gi|289548086|ref|YP_003473074.1| hydroxymethylbutenyl pyrophosphate reductase [Thermocrinis albus
DSM 14484]
gi|289181703|gb|ADC88947.1| hydroxymethylbutenyl pyrophosphate reductase [Thermocrinis albus
DSM 14484]
Length = 286
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 144/316 (45%), Gaps = 67/316 (21%)
Query: 16 KIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLN 75
+++ +IHNP RL V+ + +G ++ GDVV++ + G + L
Sbjct: 35 RVFTMGPLIHNPQEVDRLRGKGVEVLSSADGLRE------GDVVIVRSHGIPPKRERELR 88
Query: 76 NKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKE 135
K + I+D TCP+V V +V + K Y +I G+ H E V T + ++E
Sbjct: 89 RKGLTIMDATCPYVKAVHEAVTQLAKEGYFVVIVGEKDHPEVVGTLGY---------LEE 139
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
A GGE KE E K +VG+ QTT + +E+
Sbjct: 140 A--------GGE-GAVVERKEDLREVLGKE------------RVGVVAQTTQNEAFFKEV 178
Query: 196 -GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
G+L +++ V NTIC+AT ERQ+ +Y++ E VD+++VVGG NS N
Sbjct: 179 VGELC--LWVKELKV---------INTICNATSERQEDVYQLAPE-VDVMIVVGGRNSGN 226
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
T L +I+ +Y ++ + P +W KG +G+T+GAS
Sbjct: 227 TRRLYQISLSLNPRTYHVELPDELQP-----------------DWF-KGVKRVGVTAGAS 268
Query: 315 TPDKAVEDVLKKVFEI 330
TPD ++ V++K+ E+
Sbjct: 269 TPDWIIQGVVEKIREL 284
>gi|410478417|ref|YP_006766054.1| penicillin tolerance protein [Leptospirillum ferriphilum ML-04]
gi|424866297|ref|ZP_18290138.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Leptospirillum
sp. Group II 'C75']
gi|124515868|gb|EAY57377.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Leptospirillum
rubarum]
gi|387223094|gb|EIJ77466.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Leptospirillum
sp. Group II 'C75']
gi|406773669|gb|AFS53094.1| penicillin tolerance protein [Leptospirillum ferriphilum ML-04]
Length = 302
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 153/321 (47%), Gaps = 68/321 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
++I +EI+HN V K L E V++ V+E K+ V+KG +++ A G A E + +
Sbjct: 33 VFILHEIVHNTHVVKDLSERGVKS--VDEVKE----VDKGTLII-SAHGVAPEVIADARS 85
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+N+++VDTTCP V K+ V+ + +YT + G+ +H+E + A +I + + KE
Sbjct: 86 RNLEVVDTTCPLVWKIHRIVKALAEKNYTIFLLGERNHDEVMGVQGVAKDHIHIFHKKE- 144
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
E + G + S T ++ K FD +DL
Sbjct: 145 EIAHLPLTEGPVALVSQTTQSI---------KYFDEILDL-------------------- 175
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
++ ++ ++ NTICDAT++RQ + + + +D+++ VG +S+N+
Sbjct: 176 ------LLERYPQLEIH------NTICDATEKRQTSALAIAGD-MDVMITVGSMSSANSR 222
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
LQE++ SY +DS + + W G+ +G+T+GASTP
Sbjct: 223 RLQEVSAGLCRASYLVDSANEVS-----------------DTWFKGGE-RVGVTAGASTP 264
Query: 317 DKAVEDVLKKVFEIKREEALQ 337
+ +E V++K+ EI R + +
Sbjct: 265 EWLIEGVIEKLMEISRAKGFE 285
>gi|443492461|ref|YP_007370608.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase IspH
[Mycobacterium liflandii 128FXT]
gi|442584958|gb|AGC64101.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase IspH
[Mycobacterium liflandii 128FXT]
Length = 348
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 141/319 (44%), Gaps = 75/319 (23%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V L + + VEE D V +G +VV A G A
Sbjct: 71 VYVRHEIVHNRYVVDTLAKAGA--VFVEE----TDQVPEGAIVVFSAHGVAPTVYAAAAE 124
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYI-IVKNMKE 135
+N+Q +D TCP V+KV + + DY ++ G HEE V TA A +++ +V +
Sbjct: 125 RNLQTIDATCPLVTKVHNEARRFARNDYDILLIGHEGHEEVVGTAGEAPEHVQLVDGLDG 184
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
AE V D D KV +QTT+ ET EI
Sbjct: 185 AERVTIR----------------------------DED----KVVWLSQTTLSVDETMEI 212
Query: 196 GKLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGGW 250
V + + F + IC ATQ RQ A+ M E DL+LVVG
Sbjct: 213 -------------VARLRQRFPKLQDPPSDDICYATQNRQVAVKAMAPE-CDLVLVVGSR 258
Query: 251 NSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGIT 310
NSSN+ L E+A +G G + AY + + ++ ++WL +G T+G+T
Sbjct: 259 NSSNSVRLVEVA---------------LGAGAQAAYLVDWADDID-QSWL-QGVTTVGVT 301
Query: 311 SGASTPDKAVEDVLKKVFE 329
SGAS P+ V VL+++ E
Sbjct: 302 SGASVPEVLVRGVLERLAE 320
>gi|302875012|ref|YP_003843645.1| hydroxymethylbutenyl pyrophosphate reductase [Clostridium
cellulovorans 743B]
gi|307690370|ref|ZP_07632816.1| hydroxymethylbutenyl pyrophosphate reductase [Clostridium
cellulovorans 743B]
gi|302577869|gb|ADL51881.1| hydroxymethylbutenyl pyrophosphate reductase [Clostridium
cellulovorans 743B]
Length = 286
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 151/322 (46%), Gaps = 68/322 (21%)
Query: 8 ARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAA 67
A + +EK++ IIHN V +LEE V +I + + D +N+ D +++ + G +
Sbjct: 24 ASNKNIQEKMYTLGPIIHNNDVVSKLEESNVFSIELS----KIDSLNESDTIIIRSHGVS 79
Query: 68 VEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKY 127
M LN+KN+ IVD TCP+V+ + V + Y+ +I G +H E V
Sbjct: 80 KAVMDLLNSKNLNIVDATCPYVTNIHKKVHDYHNQGYSILIVGDKNHPEVVG-------- 131
Query: 128 IIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTM 187
+NG S EA + K + P K+ + +QTT
Sbjct: 132 --------------------INGWCSN-EAIITKDGSDLETAEIPK----KLCVVSQTTE 166
Query: 188 LKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQ-DAMYKMVEEKVDLILV 246
+ +++ ++ KT ++ ++ NTIC AT+ RQ +AM ++ +KVDL++V
Sbjct: 167 KQENWQKVLSILIKT----------SKELVALNTICSATEVRQKNAM--VLSKKVDLMIV 214
Query: 247 VGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQI- 305
+GG +SSNT+ L EI ++ + I++E + ++L I
Sbjct: 215 IGGKHSSNTTKLFEICKENCNNTLLIENETELSI-----------------DFLKNTDIR 257
Query: 306 TIGITSGASTPDKAVEDVLKKV 327
IGIT+GASTPD + V+ K+
Sbjct: 258 IIGITAGASTPDWIINQVVDKI 279
>gi|383784997|ref|YP_005469567.1| 4-hydroxy-3-methylbut-2-enyl-diphosphate reductase [Leptospirillum
ferrooxidans C2-3]
gi|383083910|dbj|BAM07437.1| 4-hydroxy-3-methylbut-2-enyl-diphosphate reductase [Leptospirillum
ferrooxidans C2-3]
Length = 302
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 147/319 (46%), Gaps = 72/319 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGD--VVVLPAFGAAVEEMVTL 74
++I +EI+HN V K L VQ++ D V++ D +++ A G A + +
Sbjct: 33 VFILHEIVHNTHVVKDLANRGVQSV---------DAVSEVDRGTLIISAHGVAPDVIKEA 83
Query: 75 NNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMK 134
+KN+++VDTTCP VSK+ V +YT ++ G+ SH+E + +A ++I + +
Sbjct: 84 RDKNLEVVDTTCPLVSKIHRIVRNLADKNYTILLLGEESHDEVMGVQGWAKEHIHIFHKP 143
Query: 135 EAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEE 194
E E + V G V + +QTT +E
Sbjct: 144 E------------------------EIDRLPVVSG--------PVALVSQTTQSIKYFDE 171
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
I L + K+ V+ NTICDAT++RQ + ++ + +D+++ VG S+N
Sbjct: 172 ILAL----LTVKYPQLEVH------NTICDATEKRQTSALEIAGD-MDVMITVGSTTSAN 220
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
+ LQE++ SY +DS K I P W G +G+T+GAS
Sbjct: 221 SRRLQEVSAGLCPKSYLVDSAKDINP-----------------EWF-NGSERVGVTAGAS 262
Query: 315 TPDKAVEDVLKKVFEIKRE 333
TPD +E V++++ EI E
Sbjct: 263 TPDWLIEGVIERLGEISSE 281
>gi|443488737|ref|YP_007366884.1| LytB-related protein LytB2 [Mycobacterium liflandii 128FXT]
gi|442581234|gb|AGC60377.1| LytB-related protein LytB2 [Mycobacterium liflandii 128FXT]
Length = 333
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 129/310 (41%), Gaps = 62/310 (20%)
Query: 16 KIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLN 75
+++ +I+HN TV L+ I V+E + D G VVV A G + N
Sbjct: 53 PVYVRKQIVHNRTVVAELQNRGA--IFVDELDEIPDPPAPGAVVVFSAHGVSPAVRAAAN 110
Query: 76 NKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA-GKYIIVKNMK 134
+ +++VD TCP V+KV + T ++ G HEET T A ++V+N
Sbjct: 111 GRGLEVVDATCPLVTKVHAEAARFAGRGDTVLLIGHLGHEETDGTLGVAPNSMLLVQNAD 170
Query: 135 EAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEE 194
+ EL+ + ++L QTT+ ET +
Sbjct: 171 DVT---------ELDLPEDAQVSYL-----------------------TQTTLAVDETTD 198
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
+ + K + E E IC AT RQ A+ +V + D +LVVG NSSN
Sbjct: 199 VIDALRKRFPKL--AEPPTED------ICYATTNRQRAVEAIVR-RCDALLVVGSQNSSN 249
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
+ L E+A RG P+Y ID I P +WL TIGIT+GAS
Sbjct: 250 SQRLVELARRRGTPAYLIDGPTDIDP-----------------HWL-DSTATIGITAGAS 291
Query: 315 TPDKAVEDVL 324
P + VE V+
Sbjct: 292 APPRLVEQVI 301
>gi|220936376|ref|YP_002515275.1| hydroxymethylbutenyl pyrophosphate reductase [Thioalkalivibrio
sulfidophilus HL-EbGr7]
gi|254806915|sp|B8GQR4.1|ISPH_THISH RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|219997686|gb|ACL74288.1| hydroxymethylbutenyl pyrophosphate reductase [Thioalkalivibrio
sulfidophilus HL-EbGr7]
Length = 310
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 145/311 (46%), Gaps = 60/311 (19%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L + VEE D V G V+ A G A +
Sbjct: 33 IYVRHEVVHNKFVVEDLRNKGA--VFVEE----LDEVPDGATVIFSAHGVARSVVQEAER 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V++H + I+ G H E T G+Y
Sbjct: 87 RGLRVFDATCPLVTKVHMEVDRHARRGEEVILIGHAGHPEVDGTL---GQY--------- 134
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
D GGE+ + ++A + + +PD + QTT+ +T +I
Sbjct: 135 ----DRSHGGEMYLVETVEDAERIQIR-------NPDA----LAYVTQTTLSVDDTLDI- 178
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+T+ +F N + IC ATQ RQDA+ ++ E DL LVVG NSSN++
Sbjct: 179 ---IETLKNRFP----NIQGQKRDDICYATQNRQDAVKQLASE-CDLFLVVGSPNSSNSN 230
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L+EIAE G+ +Y +D+ +I ++ WL +G+ +G+T+GAS P
Sbjct: 231 RLREIAEKLGVEAYLVDNAGQI-----------------EDRWL-EGKTRVGVTAGASAP 272
Query: 317 DKAVEDVLKKV 327
+ V++V++ +
Sbjct: 273 ELLVQEVVEHL 283
>gi|225849646|ref|YP_002729880.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Persephonella
marina EX-H1]
gi|225645910|gb|ACO04096.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Persephonella
marina EX-H1]
Length = 284
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 146/330 (44%), Gaps = 74/330 (22%)
Query: 5 AYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAF 64
A EA K+F K + IIHN V + LE + V+ + K +D + +GD +++ +
Sbjct: 23 AVEAGKKFG--KAFTNGPIIHNKQVVQFLEGLNVKEL------KSYDQLKRGDTILIRSH 74
Query: 65 GAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF- 123
G + LN V ++D TCP+V KV V++ + Y +I G+ H E +
Sbjct: 75 GVPPKTERMLNQLGVNVIDATCPFVKKVHEKVKQLVEEGYYVVIIGEEGHPEVIGILGHL 134
Query: 124 ---AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVG 180
GK I+V+NM E + KF + KVG
Sbjct: 135 EEAGGKGIVVENM----------------------EDLIRKFPRRN-----------KVG 161
Query: 181 IANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEK 240
+ QTT + EE + + E FNTICDAT RQ+ + ++ +E
Sbjct: 162 VVAQTTQNEEFFEEAVGYIASNV----------EELKVFNTICDATSVRQEEVKRLAKE- 210
Query: 241 VDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWL 300
VD+++++GG +S NT L +I++ +Y ++ + W
Sbjct: 211 VDVMIIIGGKHSGNTRRLAQISKALNPNTYHVEKADEL-----------------DSEWF 253
Query: 301 PKGQITIGITSGASTPDKAVEDVLKKVFEI 330
+ IG+++GASTPD +++V++++ EI
Sbjct: 254 KNAE-NIGVSAGASTPDWIIKEVVERIREI 282
>gi|374619242|ref|ZP_09691776.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase [gamma
proteobacterium HIMB55]
gi|374302469|gb|EHQ56653.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase [gamma
proteobacterium HIMB55]
Length = 317
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 142/313 (45%), Gaps = 64/313 (20%)
Query: 15 EKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTL 74
+ I++ +E++HN TV L + + VEE D V +V+ A G +
Sbjct: 31 QPIYVRHEVVHNKTVVDDLRDRGA--VFVEE----LDEVPDDAIVIFSAHGVSKAVQDEA 84
Query: 75 NNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMK 134
N+ +Q+ D TCP V+KV V + I+ G H E T G+Y
Sbjct: 85 ANRGLQVFDATCPLVTKVHVEVTAFSRSGKECILIGHEGHPEVEGTM---GQY------- 134
Query: 135 EAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGF--DPDVDLVKVGIANQTTMLKGET 192
+ GGE+ +L + ++ SK DPD + QTT+
Sbjct: 135 ------NRANGGEM---------YLVEDEEQASKLVVRDPD----NLSYVTQTTL---SV 172
Query: 193 EEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNS 252
++ K++E R ++ + + IC ATQ RQDA+ + + EK +++LVVG NS
Sbjct: 173 DDTAKVIEALRARFPNIQGPRK-----DDICYATQNRQDAV-RTLAEKANVVLVVGSPNS 226
Query: 253 SNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSG 312
SN++ L E+AE G +Y IDS + I P +W+ +G T+G+T+G
Sbjct: 227 SNSNRLAELAERCGSSAYLIDSAEMIDP-----------------SWVSEGD-TVGVTAG 268
Query: 313 ASTPDKAVEDVLK 325
AS P+ VE V+
Sbjct: 269 ASAPEHLVEGVVS 281
>gi|334703294|ref|ZP_08519160.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Aeromonas
caviae Ae398]
Length = 311
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 147/321 (45%), Gaps = 75/321 (23%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAA--VEEMVTL 74
I++ +E++HN V +L+E + VEE D V +V+ A G A V EM
Sbjct: 33 IYVRHEVVHNRYVVNKLKEAGA--VFVEE----LDEVPDDSIVIFSAHGVAKVVREMA-- 84
Query: 75 NNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMK 134
++ +++ D TCP V+KV V + + +++ G H E + T G+Y +N +
Sbjct: 85 KSRALKVFDATCPLVTKVHMEVHRASRKGSEAVLIGHAGHPEVIGTM---GQY---ENSE 138
Query: 135 EAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEE 194
Y+ + + ++ K K +PD DL V QTT+ ET +
Sbjct: 139 GGMYLVE-----------TPEDVARLKVK-------NPD-DLCFV---TQTTLSVDETSD 176
Query: 195 IGKLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGG 249
+ ++ + HF + IC ATQ RQDA+ +M VD +LVVG
Sbjct: 177 V-------------IDALRAHFPKIQGPRKDDICYATQNRQDAVREMAG-LVDAMLVVGS 222
Query: 250 WNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGI 309
NSSN++ L+E+AE G +Y ID I P WL G IG+
Sbjct: 223 RNSSNSNRLRELAEKVGAKAYLIDDASMIEP-----------------QWL-DGVARIGV 264
Query: 310 TSGASTPDKAVEDVLKKVFEI 330
T+GAS PD V++V+ ++ E+
Sbjct: 265 TAGASAPDVLVQNVIARLREL 285
>gi|152980257|ref|YP_001354239.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Janthinobacterium sp. Marseille]
gi|151280334|gb|ABR88744.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Janthinobacterium sp. Marseille]
Length = 309
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 143/313 (45%), Gaps = 64/313 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V L I +EE D V G+ VV A G +
Sbjct: 35 IYVRHEIVHNAYVVTDLRNKGA--IFIEE----LDDVPAGNTVVFSAHGVSKAVQAEAEK 88
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV VEK ++ I+ G H E T I M
Sbjct: 89 RGLRVFDATCPLVTKVHIEVEKMRRDGREIIMIGHDGHPEVEGTMGQ-----IEDGMHLV 143
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
E V D +EK + +PD+ + QTT+ +T +
Sbjct: 144 ETVDD-----------------VEKLQVR-----NPDM----ISYVTQTTLSIDDTAD-- 175
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
V + +F N++E IC AT RQ+A+ K + +VDL++VVG NSSN++
Sbjct: 176 --VIAALKSRF--PNISEP--KKADICYATTNRQEAV-KFMAPQVDLVIVVGSPNSSNSN 228
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L+E+AE RG+P+Y +D+ +I P +WL +G+ IG+T+GAS P
Sbjct: 229 RLREVAEKRGVPAYMVDNASQIDP-----------------DWL-RGKRRIGLTAGASAP 270
Query: 317 DKAVEDVLKKVFE 329
+ V+ V+ ++ E
Sbjct: 271 EVLVQAVIDRLKE 283
>gi|390939812|ref|YP_006403549.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Sulfurospirillum barnesii SES-3]
gi|390192919|gb|AFL67974.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Sulfurospirillum barnesii SES-3]
Length = 277
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 131/278 (47%), Gaps = 67/278 (24%)
Query: 57 DVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEE 116
D ++ G +++ L N NV++++ TCP+V+K EK + Y +I G +H E
Sbjct: 63 DKAIIRTHGIPKKDLEKLVNSNVEVINATCPYVTKPQEICEKMSQEGYEIVIFGDANHPE 122
Query: 117 TVATASFA--GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDV 174
S+A G ++ V+++ E E + FKK
Sbjct: 123 VKGVESYAIHGAFV-VQSIDELEQIV---------------------FKKG--------- 151
Query: 175 DLVKVGIANQTTMLKGETEEI-GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAM 233
K+ + +QTT E EI L+ T ++ V FNTIC+AT E QDA
Sbjct: 152 ---KIAVVSQTTRKVSEFLEITSHLI--THYKEVRV---------FNTICNATFENQDAA 197
Query: 234 YKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGEL 293
K+ +E D+++V+GG NSSNT L I ++ S+ ++SEK + P
Sbjct: 198 RKLAKE-ADVVIVIGGKNSSNTKQLHSICKEYCPDSFLVESEKDLDP------------- 243
Query: 294 VEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIK 331
+W G++ G+T+GASTPD ++ +++K+ EIK
Sbjct: 244 ----SWF-NGKMLCGVTAGASTPDWIIQKIIEKISEIK 276
>gi|221633636|ref|YP_002522862.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Thermomicrobium
roseum DSM 5159]
gi|221156771|gb|ACM05898.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Thermomicrobium
roseum DSM 5159]
Length = 320
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 139/315 (44%), Gaps = 66/315 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIP-VEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLN 75
I ++IHNP V +RL+ ++ + V E +++ V + A GA +
Sbjct: 38 IATVGDVIHNPQVVERLKVQGIEPVSSVSEARER-----GFRRVAITAHGAGPQRAAEAR 92
Query: 76 NKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAG--KYIIVKNM 133
+ ++++DTTCP V+KV EK + Y +++G H E +AG + + K++
Sbjct: 93 DAGLELIDTTCPLVTKVQRLAEKLVRQGYFLVVYGDAHHPEVRGVLGWAGTSRAVAAKHL 152
Query: 134 KEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETE 193
++ + K + V P KV + +QTT
Sbjct: 153 EDLPW----------------------KGPRGVPGVVAPP---RKVAVVSQTT------- 180
Query: 194 EIGKLVEKTMMRKFGVEN-VNEH---FISFNTICDATQERQDAMYKMVEEKVDLILVVGG 249
K ++ + G+ N V H NTIC T ERQ+A+ + E VD++L VGG
Sbjct: 181 ---KQTDEFLAFALGLANWVARHGGEIRIVNTICQPTWERQEALRALARE-VDVLLAVGG 236
Query: 250 WNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGI 309
SSNT+ L E+ G+PSY I+ + I WL +G+ +G+
Sbjct: 237 KKSSNTARLAEVGRACGVPSYHIERPEEI-----------------DRAWL-EGKRVVGV 278
Query: 310 TSGASTPDKAVEDVL 324
T+GASTPD+ V V+
Sbjct: 279 TAGASTPDEVVLAVV 293
>gi|149377779|ref|ZP_01895512.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Marinobacter
algicola DG893]
gi|149357951|gb|EDM46440.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Marinobacter
algicola DG893]
Length = 317
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 141/318 (44%), Gaps = 74/318 (23%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L I V+E + V +V+ A G +
Sbjct: 33 IYVRHEVVHNKFVVDNLRNRGA--IFVDE----LEEVPDDKLVIFSAHGVSQAVQNEAAR 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V K+ + I+ G + H E T G+Y
Sbjct: 87 RGLKVFDATCPLVTKVHLEVMKYSRDGRECILIGHHGHPEVEGTM---GQY--------- 134
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGF--DPDVDLVKVGIANQTTMLKGETEE 194
D+ GG++ +L + +K V++ DP K+ QTT+ +T
Sbjct: 135 ----DHGNGGDI---------YLVEDEKDVAELLVKDPS----KLSYVTQTTLSMDDTAR 177
Query: 195 IGKLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGG 249
+ ++ + E F N IC ATQ RQDA+ K + DL+LVVG
Sbjct: 178 V-------------IDALREKFPEIQGPRKNDICYATQNRQDAV-KQLAGDCDLMLVVGS 223
Query: 250 WNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGI 309
NSSN++ L+E+AE G P+Y ID +I P WL G+ +IG+
Sbjct: 224 PNSSNSNRLRELAERMGTPAYLIDEAAQIDP-----------------QWL-DGKTSIGV 265
Query: 310 TSGASTPDKAVEDVLKKV 327
T+GAS P+ V DV+ ++
Sbjct: 266 TAGASAPEVLVNDVISRL 283
>gi|387813168|ref|YP_005428649.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase
[Marinobacter hydrocarbonoclasticus ATCC 49840]
gi|381338179|emb|CCG94226.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase, 4Fe-4S
protein [Marinobacter hydrocarbonoclasticus ATCC 49840]
Length = 317
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 145/318 (45%), Gaps = 60/318 (18%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L I V+E D V +V+ A G +
Sbjct: 33 IYVRHEVVHNKFVVDNLRNRGA--IFVDE----LDEVPDDKLVIFSAHGVSQAVQNEAAR 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V ++ + I+ G + H E T G+Y
Sbjct: 87 RGLKVFDATCPLVTKVHMEVMRYSRDGRECILIGHHGHPEVEGTM---GQY--------- 134
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
D+ GG++ EA ++K + DP ++ QTT+ +T
Sbjct: 135 ----DHSNGGDI--YLVEDEADVQKLEVK-----DPS----RLSFVTQTTLSMDDT---A 176
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
++++ + +E + + IC ATQ RQDA+ K + DL+LVVG NSSN++
Sbjct: 177 RVIDALRAKFPKIEGPRK-----DDICYATQNRQDAV-KQLAGDCDLMLVVGSPNSSNSN 230
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L+E+AE G P+Y ID +I P WL +G+ +G+T+GAS P
Sbjct: 231 RLRELAERMGTPAYLIDEAAQIEP-----------------QWL-EGKKAVGVTAGASAP 272
Query: 317 DKAVEDVLKKVFEIKREE 334
+ V DV+ ++ E+ EE
Sbjct: 273 EVLVADVIARLKELGGEE 290
>gi|390934973|ref|YP_006392478.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Thermoanaerobacterium saccharolyticum JW/SL-YS485]
gi|389570474|gb|AFK86879.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Thermoanaerobacterium saccharolyticum JW/SL-YS485]
Length = 283
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 144/324 (44%), Gaps = 68/324 (20%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AY+ + K + E+IHNP V K LE ++ I + D +++ +++
Sbjct: 21 MAYDQVNNGDDFKTYAYGELIHNPQVVKDLENKGIKTI------EHIDELDENSKILIRT 74
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
G + L K V+I+D TCP+V +V V + K Y+ +I G +H E V
Sbjct: 75 HGIPEKIYEELKKKKVEIIDMTCPFVKRVQKIVNGYYKKGYSIVIIGDRNHPEVVG---- 130
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
+NG + ++ S F L K +
Sbjct: 131 ------------------------VNGWCNNSAYVIQSIDDVNSLPF-----LDKACVVA 161
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTT+ + E+I L+ + IS+NTICDAT +RQ + K+ +E VD+
Sbjct: 162 QTTITQKMWEDILALLRLKA----------KELISYNTICDATNKRQSSAEKISKE-VDM 210
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG NSSNT L++I E + +K I N L+ + VE
Sbjct: 211 MIVIGGKNSSNTQKLKKICEK--------NCDKTIQIENADEIDLIILKDVE-------- 254
Query: 304 QITIGITSGASTPDKAVEDVLKKV 327
T+GIT+GASTPD +++V+ K+
Sbjct: 255 --TVGITAGASTPDYLIQEVVDKI 276
>gi|51246018|ref|YP_065902.1| LytB protein [Desulfotalea psychrophila LSv54]
gi|71152179|sp|Q6AL80.1|ISPH_DESPS RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|50877055|emb|CAG36895.1| probable LytB protein [Desulfotalea psychrophila LSv54]
Length = 313
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 147/319 (46%), Gaps = 69/319 (21%)
Query: 15 EKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTL 74
E +++ +EI+HN V L + + VEE + + G + + A G +++
Sbjct: 39 EPVYVLHEIVHNRHVIDNLRQGGA--VFVEE----LEQIPAGAICIFSAHGVSLQIEKRA 92
Query: 75 NNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATAS-FAGKYIIVKNM 133
++ +D TCP VS V VEK+ + +I G + H E TA G+ +V
Sbjct: 93 KALGLKTIDATCPLVSSVHRMVEKYHAEGCSVVIIGHHRHPEVEGTAGRVTGEVYVVATA 152
Query: 134 KEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETE 193
EAE +L ++S K AF+ QTT+ + + E
Sbjct: 153 AEAE---------KLQVNNSEKIAFV-----------------------TQTTLAENDIE 180
Query: 194 EIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSS 253
++ LV + R+F + + + IC ATQ RQ+A+ + + DLILVVG NSS
Sbjct: 181 QV--LV--VLRRRFPLLQGPK-----SNICFATQNRQNAV-RTLARCTDLILVVGSKNSS 230
Query: 254 NTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGA 313
N++ L+E+ + G P+Y ID K + KE+W +G +GIT+GA
Sbjct: 231 NSNRLREVGTETGTPAYLIDDFKDL-----------------KESWF-RGCERVGITAGA 272
Query: 314 STPDKAVEDVLKKVFEIKR 332
S P+ VE V+ V+ +KR
Sbjct: 273 SAPESLVEGVV--VWLLKR 289
>gi|344939823|ref|ZP_08779111.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Methylobacter
tundripaludum SV96]
gi|344261015|gb|EGW21286.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Methylobacter
tundripaludum SV96]
Length = 315
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 145/311 (46%), Gaps = 59/311 (18%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN TV L+E I +E+ V G ++ A G + +
Sbjct: 33 IYVRHEVVHNRTVVDGLKEKGA--IFIED----LTDVPVGSYLIFSAHGVSKQVQQEAKE 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+N+ + D TCP V+KV V KH K D I+ G H E T M +
Sbjct: 87 RNLTVFDATCPLVTKVHLQVAKHAKEDREVILIGHAGHPEVEGT------------MGQY 134
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
E D NG E E K K +PD DL V QTT+ +T+
Sbjct: 135 ERGTD-------NGGIYLVET-PEDVKNLAVK--NPD-DLAYV---TQTTLSMTDTK--- 177
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+V+ R G++ + + IC ATQ RQDA+Y++ + D+ILVVG NSSN++
Sbjct: 178 IMVDALRARFKGIQEQKK-----DDICYATQNRQDAVYELAK-TADIILVVGSPNSSNSN 231
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L+EIA+ G +Y ID+ K + ++NW +G +G+T+GAS P
Sbjct: 232 RLREIADQLGKQAYLIDTAKDM-----------------QQNWF-EGVAVVGVTAGASAP 273
Query: 317 DKAVEDVLKKV 327
+ V++V+ ++
Sbjct: 274 EVLVQEVIDQL 284
>gi|292491349|ref|YP_003526788.1| hydroxymethylbutenyl pyrophosphate reductase [Nitrosococcus
halophilus Nc4]
gi|291579944|gb|ADE14401.1| hydroxymethylbutenyl pyrophosphate reductase [Nitrosococcus
halophilus Nc4]
Length = 320
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 144/323 (44%), Gaps = 66/323 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V + L++ V I E+ + G V + A G A +
Sbjct: 33 IYVLHEIVHNQHVVEDLQQRGV--IFTED----LVSIPPGSVTIFSAHGVATAVVEAAKE 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKE 135
N+Q++D TCP V+KV +K+ + II G H E T G ++ +++E
Sbjct: 87 NNLQVIDATCPLVTKVHLQAQKYHRHGNELIIIGHSGHPEVEGTRGRVEGPVYVLDSVEE 146
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
AE + E+ DP+ V QTT+ +T ++
Sbjct: 147 AEKL-------EIK---------------------DPE----HVAYVTQTTLSIDDTRDV 174
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
++K + G E + IC ATQ RQ+A+ +M +E +D++LVVG NSSN+
Sbjct: 175 VDALKKRFPKIHGPE--------LDDICYATQNRQNAVREMSKE-IDILLVVGARNSSNS 225
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L+E+ E G+ ++ I K + +W Q +G+T+GAST
Sbjct: 226 NRLREVGEQNGVIAHLIQDTKDL-----------------DSSWFTP-QSRVGVTAGAST 267
Query: 316 PDKAVEDVLKKVFEIKREEALQL 338
P+ V+ VL K+ + EE L
Sbjct: 268 PEVLVQGVLNKLRDYGVEEVQDL 290
>gi|257069424|ref|YP_003155679.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Brachybacterium
faecium DSM 4810]
gi|256560242|gb|ACU86089.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Brachybacterium
faecium DSM 4810]
Length = 337
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 98/336 (29%), Positives = 152/336 (45%), Gaps = 79/336 (23%)
Query: 2 AFIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVL 61
A +A E + +E I++ +EI+HN V RL+E + VEE D + +G +V+
Sbjct: 24 AVVAVERALEHYDETIYVRHEIVHNKFVVDRLKEKGA--VFVEE----VDEIPEGSLVIF 77
Query: 62 PAFGAA--VEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVA 119
A G + V EM +N++ +D TCP V+KV + + DY ++ G HEE
Sbjct: 78 SAHGISPKVREMA--EERNLRTIDATCPLVTKVHKEAVRFARQDYDILLVGHEGHEEVEG 135
Query: 120 TASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKV 179
TA A +++ + N + + K V DP+ +V
Sbjct: 136 TAGEAPEHVQIVNSPD------------------------DVHKVTVR---DPE----RV 164
Query: 180 GIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT-----ICDATQERQDAMY 234
+QTT+ ET E V+ + E F + + IC ATQ RQ A+
Sbjct: 165 VWLSQTTLSVDETMET-------------VDKLRERFPTLQSPPSDDICYATQNRQVAIK 211
Query: 235 KMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGI-PSYWIDSEKRIGPGNKIAYKLMHGEL 293
K+ + DL+LVVG NSSN+ L E+A++ G S+ IDS +
Sbjct: 212 KIAPD-ADLVLVVGSPNSSNSVRLMEVAKEAGAKASHRIDSVHEL--------------- 255
Query: 294 VEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 329
+E W +G T+G+TSGAS PD V+ +L + E
Sbjct: 256 --QEEWF-EGVETVGVTSGASVPDVLVQQLLNVLAE 288
>gi|92112617|ref|YP_572545.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Chromohalobacter salexigens DSM 3043]
gi|122420756|sp|Q1R0B2.1|ISPH_CHRSD RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|91795707|gb|ABE57846.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Chromohalobacter salexigens DSM 3043]
Length = 317
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 141/328 (42%), Gaps = 70/328 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L E + VEE + D V +V+ A G +
Sbjct: 33 IYVRHEVVHNRFVVDSLRERGA--VFVEELHEVPDDV----IVIFSAHGVSRAVQQEAER 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-----ASFAGKYIIVK 131
+ ++I D TCP V+KV V ++ K ++ G H E T SF G+ +V+
Sbjct: 87 RGLRIFDATCPLVTKVHMEVLRYAKRGQECVLIGHAGHPEVEGTMGRYDTSFGGQIYLVE 146
Query: 132 NMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGE 191
+ + E + E+NG ++ QTT+ +
Sbjct: 147 DEADVENL-------EVNGPE-------------------------RLAFVTQTTLSMDD 174
Query: 192 TEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWN 251
T + + + G + IC ATQ RQDA+ + E DL+LVVG N
Sbjct: 175 TSRVIDALRAKFPQIDGPRK--------DDICYATQNRQDAVRGLASES-DLVLVVGSPN 225
Query: 252 SSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITS 311
SSN++ L+E+AE G P+Y ID+ ++I P WL IGIT+
Sbjct: 226 SSNSNRLRELAERTGTPAYLIDTAEQIRP-----------------EWLTDVS-AIGITA 267
Query: 312 GASTPDKAVEDVLKKVFEIKREEALQLA 339
GAS P+ V+ V++++ + E +LA
Sbjct: 268 GASAPEVLVQAVIERLQSLGAEAPDELA 295
>gi|308271410|emb|CBX28018.1| hypothetical protein N47_G33420 [uncultured Desulfobacterium sp.]
Length = 573
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 137/321 (42%), Gaps = 73/321 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKG-DVVVLPAFGAAVEEMVTLN 75
I+ +IHNP V L E + I D+ KG V++ A G +L
Sbjct: 33 IFTFGPLIHNPQVLDLLCEKGISIID--------DIPEKGFGTVLIRAHGVPPGIKKSLK 84
Query: 76 NKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA-GKYIIVKNMK 134
N +++D TCP V KV T + KH K YTSII G H E + +A G V ++
Sbjct: 85 NSGFKVIDATCPRVIKVRTIIGKHAKDGYTSIIIGDKDHPEVIGLLGYARGNGYAVASID 144
Query: 135 EAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEE 194
E E L KF+KA+ + QTT E+
Sbjct: 145 ELES--------------------LPKFEKAI--------------VVAQTTQNIIFYEK 170
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
+ +LV HF ++TIC++T RQ A K + E VD I+VVGG NS N
Sbjct: 171 VKELVASKY----------PHFKLYDTICNSTSMRQ-AEVKELAELVDAIVVVGGHNSGN 219
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
T L E A G P+Y I++E + N L + +IGIT+GAS
Sbjct: 220 TQRLAEAAIQAGKPAYRIETESEL-----------------DLNLLSSAR-SIGITAGAS 261
Query: 315 TPDKAVEDVLKKVFEIKREEA 335
TP+ ++ V + + ++ +A
Sbjct: 262 TPNWLIKRVYRSLDDLSYNKA 282
>gi|257458043|ref|ZP_05623202.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
vincentii ATCC 35580]
gi|257444756|gb|EEV19840.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
vincentii ATCC 35580]
Length = 333
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 138/324 (42%), Gaps = 72/324 (22%)
Query: 6 YEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNI-PVEEGKKQFDVVNKGDVVVLPAF 64
Y A +P++ ++ +IHNP + LE V + P EE K Q + +++ A
Sbjct: 68 YRALADYPDKTVYTYGPLIHNPVTMRLLEAKGVHIVNPDEELKPQIIPQSP---IIIRAH 124
Query: 65 GAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA 124
G + ++ L + I+D TCP V ++ + YT I+ G +H E + +
Sbjct: 125 GISPQKRQELIDCGAIIIDATCPKVIASQFKAAQYSQKGYTVILAGDRNHGELIGIRGYV 184
Query: 125 -----GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKV 179
GK I V+ EAE + D +G+ +
Sbjct: 185 LSVPNGKCITVQTAAEAETLQD-------DGAPTV------------------------- 212
Query: 180 GIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEE 239
+ QTT+ + E I ++ K + H TIC AT ERQ+A+ ++V+E
Sbjct: 213 -LIAQTTIKRDEYRAIADILHKKIA----------HLTVLETICSATDERQEALLELVKE 261
Query: 240 KVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENW 299
VD ILVVGG NS+NT L + A D G P++ ++ I P Y
Sbjct: 262 -VDAILVVGGSNSANTRRLLQTAVDSGKPAWLAETAADI-PSEVCCYH------------ 307
Query: 300 LPKGQITIGITSGASTPDKAVEDV 323
TIG+ +GASTPD +++ +
Sbjct: 308 ------TIGLAAGASTPDSSIDTI 325
>gi|323527113|ref|YP_004229266.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia sp.
CCGE1001]
gi|323384115|gb|ADX56206.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia sp.
CCGE1001]
Length = 319
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 144/315 (45%), Gaps = 66/315 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V + L + I ++ + V G+ V+ A G + +
Sbjct: 43 IYVRHEIVHNAYVVEDLRKKGAIFI------ERLEEVPPGNTVIFSAHGVSKAVRSEAES 96
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYI-IVKNMKE 135
+ +++ D TCP V+KV V K ++ + ++ G H E T AG+ + +V+++++
Sbjct: 97 RGLRVYDATCPLVTKVHIEVAKMRQDGFDIVMIGHKGHPEVEGTMGQAGEGMHLVEDIED 156
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
E + + DP+ ++ QTT+ + EI
Sbjct: 157 VEAL----------------------------QLADPE----RIAFVTQTTLSVDDAAEI 184
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
+R + + IC ATQ RQDA+ K + + D+++VVG NSSN+
Sbjct: 185 --------IRALKAKYPSIREPKKQDICYATQNRQDAV-KFMAPQCDVVIVVGSPNSSNS 235
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L+E+AE G+PSY +DS +I P W+ +G+ IG+T+GAS
Sbjct: 236 NRLRELAEKLGVPSYMVDSPDQIDPA-----------------WV-EGKRRIGVTAGASA 277
Query: 316 PDKAVEDVLKKVFEI 330
P+ + V+ ++ E+
Sbjct: 278 PEVLAQAVIARLREL 292
>gi|39997698|ref|NP_953649.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [Geobacter
sulfurreducens PCA]
gi|409913050|ref|YP_006891515.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [Geobacter
sulfurreducens KN400]
gi|50400913|sp|Q749Y8.1|ISPH_GEOSL RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|39984590|gb|AAR35976.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [Geobacter
sulfurreducens PCA]
gi|298506631|gb|ADI85354.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [Geobacter
sulfurreducens KN400]
Length = 282
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 148/327 (45%), Gaps = 73/327 (22%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+A+EA ++ E + + IIH+P V +RLE M V+ + EG + G V++ +
Sbjct: 21 MAFEAAEK--EGETFTLGPIIHSPQVVQRLEGMGVKVLSDLEG------IGNG-TVIIRS 71
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
G E+ + +++VD TCP+V K V++ YT ++ G H E S+
Sbjct: 72 HGVTSAELEDAVRRQLEVVDATCPFVKKAQEHVKRLSHDGYTVVVVGDADHPEVQGIVSY 131
Query: 124 A-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIA 182
A G +V + +EA A L KK VG+
Sbjct: 132 AEGPVHVVGSGEEA--------------------ARLPNMKK--------------VGVV 157
Query: 183 NQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVD 242
QTT ++ E K V K + K G V FNTICDAT RQD + E VD
Sbjct: 158 AQTT----QSFETLKNVVKECLLKGGEIRV------FNTICDATAVRQDEAKALARE-VD 206
Query: 243 LILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPK 302
++V+GG+NS+NT L E+ + +Y I++ + + +W +
Sbjct: 207 CMIVIGGFNSANTKRLAEVCSELQPRTYHIETAQEL-----------------DASWF-Q 248
Query: 303 GQITIGITSGASTPDKAVEDVLKKVFE 329
G +G+T+GASTP +++V++++ E
Sbjct: 249 GVERVGVTAGASTPKWLIDEVIERIQE 275
>gi|399543770|ref|YP_006557078.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Marinobacter
sp. BSs20148]
gi|399159102|gb|AFP29665.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Marinobacter
sp. BSs20148]
Length = 316
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 145/315 (46%), Gaps = 62/315 (19%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN +V +L + I VEE V +V+ A G + +
Sbjct: 33 IYVRHEVVHNKSVVDKLRKRGA--IFVEE----LSEVPDDKLVIFSAHGVSQAVQKEAAD 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V ++ + ++ G + H E T G+Y
Sbjct: 87 RGLKVFDATCPLVTKVHIEVMRYSRDGSECVLIGHHGHPEVEGTM---GQY--------- 134
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDV-DLVKVGIANQTTMLKGETEEI 195
++ GG++ +L + + V+K DV + K+ QTT+ +T +
Sbjct: 135 ----NFANGGDI---------YLVENEADVAK---LDVKNPEKLAYVTQTTLSMDDTARV 178
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
+ + G + IC ATQ RQDA+ KM ++ DL+LVVG NSSN+
Sbjct: 179 INALRAKFPKIEGPRK--------DDICYATQNRQDAVKKMADD-CDLMLVVGSPNSSNS 229
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L+E+AE G P+Y ID +I P WL G+ +IG+T+GAS
Sbjct: 230 NRLRELAERMGTPAYLIDEAAQIDPA-----------------WL-DGKKSIGVTAGASA 271
Query: 316 PDKAVEDVLKKVFEI 330
P+ V V+ ++ E+
Sbjct: 272 PEVLVSAVIARLREL 286
>gi|225848129|ref|YP_002728292.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Sulfurihydrogenibium azorense Az-Fu1]
gi|225643312|gb|ACN98362.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Sulfurihydrogenibium azorense Az-Fu1]
Length = 287
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 144/315 (45%), Gaps = 66/315 (20%)
Query: 18 WITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNK 77
+ IIHN V LE + ++ + K + + G+ V++ + G E L +
Sbjct: 34 YTNGPIIHNKQVVSYLESIGIKEL------KDYSQLKPGETVIIRSHGVPPETERQLKSM 87
Query: 78 NVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAE 137
N+ ++D TCP+V KV V + + Y +I G+ H E + T + ++K
Sbjct: 88 NINVLDATCPFVKKVHDKVRQLVEEGYFVVIIGEEGHPEVIGT---------LGHLK--- 135
Query: 138 YVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKG-ETEEIG 196
E+NG E F + KK + K+G+ QTT + E +G
Sbjct: 136 ---------EVNGQGVVVENFEDLIKKVPKRN--------KIGVVAQTTQSEDFFREAVG 178
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
L E T E FNTICDAT RQ+ + K+ VD+++++GG +S NT
Sbjct: 179 YLAENT-----------EELKVFNTICDATSVRQEEVKKLA-PTVDVMIIIGGKHSGNTQ 226
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L +I++ +Y I++ E ++KE W +G+ +GI++GASTP
Sbjct: 227 RLAQISKALNPNTYHIET----------------AEELQKE-WF-EGKDNVGISAGASTP 268
Query: 317 DKAVEDVLKKVFEIK 331
D + V++K+ ++K
Sbjct: 269 DWIINQVVEKIKQLK 283
>gi|152990411|ref|YP_001356133.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nitratiruptor
sp. SB155-2]
gi|166217469|sp|A6Q2R7.1|ISPH_NITSB RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|151422272|dbj|BAF69776.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nitratiruptor
sp. SB155-2]
Length = 275
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 143/309 (46%), Gaps = 68/309 (22%)
Query: 23 IIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIV 82
+IHN RL+E N+ + E + D + + VV+ G E++ L KNV+++
Sbjct: 34 LIHNKNEIDRLKEK--YNVELVE---EIDEIQENSRVVIRTHGIPKEKLALLKEKNVEVI 88
Query: 83 DTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDY 142
D TCP+V+K V K + Y+ +I G +H E S+A I+V +++E E
Sbjct: 89 DATCPFVTKPQEIVSKMSEEGYSIVIFGDINHPEIKGVMSYATDPIVVLSVEELE----- 143
Query: 143 ILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKT 202
KE KV QTT + EE K+V
Sbjct: 144 --------GKPLKE---------------------KVATVAQTTR---KFEEYQKIVNYL 171
Query: 203 MMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIA 262
M K V FNTIC+AT E QDA ++ E D+++++GG NSSNT L +I
Sbjct: 172 MEHKKEVR-------VFNTICNATFENQDAARELSRE-ADIMIIIGGKNSSNTKQLFKIC 223
Query: 263 EDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVED 322
++ SY +++ K + EKE W +G+ GIT+GASTP+ +E+
Sbjct: 224 KENCPDSYLVENAKEL----------------EKE-WF-EGKKVCGITAGASTPNWIIEE 265
Query: 323 VLKKVFEIK 331
V++ + +I+
Sbjct: 266 VIENIKKIQ 274
>gi|325109982|ref|YP_004271050.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Planctomyces
brasiliensis DSM 5305]
gi|324970250|gb|ADY61028.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Planctomyces
brasiliensis DSM 5305]
Length = 379
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 143/325 (44%), Gaps = 67/325 (20%)
Query: 15 EKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTL 74
+ I + +EI+HN V +R ++ V+ + + V +G ++V A G +
Sbjct: 98 DNIHVYHEIVHNKYVVERFTKLGVRFV------DEVSDVPEGAILVYSAHGVSPAIRQQA 151
Query: 75 NNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMK 134
++ +Q +D TCP V+KV ++ + Y ++ G H+E V T A + I + +
Sbjct: 152 RDRKLQTIDATCPLVTKVHMEAIRYARQGYNIVLIGHEGHDEVVGTMGEAPESITLVDTP 211
Query: 135 EAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEE 194
E +EK F PD K+ QTT+ EE
Sbjct: 212 ED----------------------VEKLS------FAPDA---KLAYLTQTTL---SVEE 237
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
G+L+ K R +E+ + IC AT RQ A+ ++ E + D++LV+G NSSN
Sbjct: 238 AGRLIAKLKERYPQIESPPK-----EDICYATTNRQHAVAQLTE-RADVVLVLGSQNSSN 291
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
+ L+EIA+ G P+Y ID I +E+W + + IT+GAS
Sbjct: 292 SQRLKEIAKSLGRPAYLIDGAGEI-----------------QEDWFTEDN-NVLITAGAS 333
Query: 315 TPDKAVE---DVLKKVFEIKREEAL 336
P+ V+ D LK F + EE +
Sbjct: 334 APEVVVQEVVDYLKTTFNAELEEVV 358
>gi|118616061|ref|YP_904393.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
ulcerans Agy99]
gi|166217175|sp|A0PKQ3.1|ISPH_MYCUA RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|118568171|gb|ABL02922.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase IspH
[Mycobacterium ulcerans Agy99]
Length = 332
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 142/318 (44%), Gaps = 73/318 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V L + + VEE D V +G +VV A G A
Sbjct: 55 VYVRHEIVHNRHVVDTLAKAGA--VFVEE----TDQVPEGAIVVFSAHGVAPTVYAAAAE 108
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+N+Q +D TCP V+KV + + DY ++ G HEE V TA A +++
Sbjct: 109 RNLQTIDATCPLVTKVHNEARRFARNDYDILLIGHEGHEEVVGTAGEAPEHV-------- 160
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
++ G L+ ++ + D KV +QTT+ ET EI
Sbjct: 161 -----QLVDG------------LDGVERVTIRDED------KVVWLSQTTLSVDETMEI- 196
Query: 197 KLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGGWN 251
V + + F + IC ATQ RQ A+ M E DL+LVVG N
Sbjct: 197 ------------VARLRQRFAKLQDPPSDDICYATQNRQVAVKAMAPE-CDLVLVVGSRN 243
Query: 252 SSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITS 311
SSN+ L E+A +G G + AY + + ++ ++WL +G T+G+TS
Sbjct: 244 SSNSVRLVEVA---------------LGAGAEAAYLVDWADDID-QSWL-QGVTTVGVTS 286
Query: 312 GASTPDKAVEDVLKKVFE 329
GAS P+ V VL+++ E
Sbjct: 287 GASVPEVLVRGVLERLAE 304
>gi|182420544|ref|ZP_02951677.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
perfringens NCTC 8239]
gi|182379882|gb|EDT77361.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
perfringens NCTC 8239]
Length = 282
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 149/326 (45%), Gaps = 67/326 (20%)
Query: 5 AYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAF 64
A + +K+F + KI+ +IHN V LE+ + I + + D + KGDVV++ +
Sbjct: 24 AIKYQKEFGK-KIYTLGPLIHNNDVVNYLEDNDIFAIELSDA----DSLKKGDVVLIRSH 78
Query: 65 GAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA 124
G + L +K + + + TCP+V+ + V+K + Y II G +H E + +
Sbjct: 79 GVKESVIKDLTDKGLIVKNATCPYVTNIQLKVKKCYEQGYKIIIVGDENHPEVIGINGWC 138
Query: 125 GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQ 184
I+ N K LE KV + +Q
Sbjct: 139 NDSAIITNGKTE----------------------LENIP-------------AKVCVVSQ 163
Query: 185 TTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLI 244
TT E +E V ++R V++ ++FNTIC AT RQ ++ ++ +E DL+
Sbjct: 164 TT----EKKETWNKVLNEIVR------VSKEIVAFNTICSATDVRQKSVQELSKE-ADLV 212
Query: 245 LVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQ 304
V+GG NSSNT+ L EI + SY I++ K + L+ E V+
Sbjct: 213 FVIGGKNSSNTTKLYEICKKECPKSYHIENVKELDES------LLEDESVK--------- 257
Query: 305 ITIGITSGASTPDKAVEDVLKKVFEI 330
TIGIT+GASTPD + +V+ K+ E+
Sbjct: 258 -TIGITAGASTPDWIINEVISKIKEL 282
>gi|268679252|ref|YP_003303683.1| hydroxymethylbutenyl pyrophosphate reductase [Sulfurospirillum
deleyianum DSM 6946]
gi|268617283|gb|ACZ11648.1| hydroxymethylbutenyl pyrophosphate reductase [Sulfurospirillum
deleyianum DSM 6946]
Length = 277
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 126/274 (45%), Gaps = 65/274 (23%)
Query: 60 VLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVA 119
++ G ++ TL NV++++ TCP+V+K EK K Y +I G +H E
Sbjct: 66 IIRTHGIPKNDLETLVQSNVEVINATCPYVTKPQEICEKMSKEGYEIVIFGDANHPEVKG 125
Query: 120 TASFA--GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLV 177
S+A G ++I S E KFK++
Sbjct: 126 VESYAIHGAHVI----------------------QSVDELADVKFKRS------------ 151
Query: 178 KVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMV 237
K+ + +QTT E EI + T ++ V FNTIC+AT E QDA ++
Sbjct: 152 KIAVVSQTTRKVSEFLEITSYL-ITHYKEVRV---------FNTICNATFENQDAARELA 201
Query: 238 EEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKE 297
+E D+++V+GG NSSNT L I ++ S+ ++SEK + P
Sbjct: 202 KE-ADVVVVIGGKNSSNTKQLHSICKEYCPDSFLVESEKDLDP----------------- 243
Query: 298 NWLPKGQITIGITSGASTPDKAVEDVLKKVFEIK 331
+W +G++ G+T+GASTPD +E ++ K+ EIK
Sbjct: 244 SWF-EGKMLCGVTAGASTPDWIIEKIIGKISEIK 276
>gi|423203546|ref|ZP_17190124.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Aeromonas
veronii AER39]
gi|404612841|gb|EKB09898.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Aeromonas
veronii AER39]
Length = 311
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 149/321 (46%), Gaps = 75/321 (23%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAA--VEEMVTL 74
I++ +E++HN V +L+E + VEE D V +V+ A G A V EM
Sbjct: 33 IYVRHEVVHNRYVVNKLKEAGA--VFVEE----LDEVPDDSIVIFSAHGVAKTVREMA-- 84
Query: 75 NNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMK 134
++ +++ D TCP V+KV V + + +++ G H E + T G+Y +N +
Sbjct: 85 KSRALKVFDATCPLVTKVHMEVHRASRKGSEAVLIGHAGHPEVIGTM---GQY---ENHE 138
Query: 135 EAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEE 194
Y+ + T E + K +PD DL V QTT+ ET +
Sbjct: 139 GGMYLVE------------TPEDVAKLRVK------NPD-DLCFV---TQTTLSVDETSD 176
Query: 195 IGKLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGG 249
+ ++ + +HF + + IC ATQ RQDA+ +M VD +LVVG
Sbjct: 177 V-------------IDALRKHFPNIQGPRKDDICYATQNRQDAVREMAG-LVDAMLVVGS 222
Query: 250 WNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGI 309
NSSN++ L+E+AE G +Y ID I G WL +G IG+
Sbjct: 223 RNSSNSNRLRELAEKVGAKAYLIDDASMIETG-----------------WL-EGVKAIGV 264
Query: 310 TSGASTPDKAVEDVLKKVFEI 330
T+GAS PD V++V+ ++ E+
Sbjct: 265 TAGASAPDILVQNVIARLREL 285
>gi|336324077|ref|YP_004604044.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Flexistipes
sinusarabici DSM 4947]
gi|336107658|gb|AEI15476.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Flexistipes
sinusarabici DSM 4947]
Length = 284
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/309 (30%), Positives = 135/309 (43%), Gaps = 70/309 (22%)
Query: 23 IIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIV 82
IIHNP V K+ E+ V VE + D + VVL + G L NV I+
Sbjct: 38 IIHNPQVVKQFEDNGVL---VERDAGKLDSSHS---VVLRSHGITKSTYEKLKKNNVDII 91
Query: 83 DTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF-AGKYIIVKNMKEAEYVCD 141
D TCP+V+K K Y ++ G+ H E S+ GKY I+ + K+ E V
Sbjct: 92 DATCPFVNKAHEEAAKLSGDGYDVVVLGEADHPEVKGIVSYIKGKYHIISDEKDIENV-- 149
Query: 142 YILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEK 201
D+D KVG+ QTT + + KL+E
Sbjct: 150 -------------------------------DLD-SKVGLIAQTTQDREVFNRVRKLLE- 176
Query: 202 TMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEI 261
T ++ V NTIC+AT RQ A K+ + VDL+LV+GG NS NT+ L +I
Sbjct: 177 TRAKELKV---------VNTICNATNLRQHAAKKLAKS-VDLMLVIGGKNSGNTTRLFKI 226
Query: 262 AEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVE 321
+ +Y I++ GEL + + IGIT+GASTPD +E
Sbjct: 227 CRELCANTYHIETA---------------GELTKD---MFDNVENIGITAGASTPDFLIE 268
Query: 322 DVLKKVFEI 330
+VL+ + E+
Sbjct: 269 EVLEYINEV 277
>gi|319779282|ref|YP_004130195.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Taylorella
equigenitalis MCE9]
gi|317109306|gb|ADU92052.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Taylorella
equigenitalis MCE9]
gi|399114552|emb|CCG17346.1| recname: full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
ec=1.17.1.2 [Taylorella equigenitalis 14/56]
Length = 315
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 143/315 (45%), Gaps = 66/315 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V + L A I V+E D V +G +V+ A G ++
Sbjct: 39 IYVRHEIVHNRFVVQSLR--AKGAIFVDE----LDEVPEGSIVIFSAHGVSLNVRREAEA 92
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA-GKYIIVKNMKE 135
+ +++ D TCP V+KV V+K + + I+ G H E T A G +V+ +++
Sbjct: 93 RGLRVFDATCPLVTKVHIEVKKMHEAGRSIIMIGHKGHPEVEGTLGQARGNMYLVETVED 152
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
+ + + DPD + QTT+ +T
Sbjct: 153 VQNL----------------------------EVPDPD----NLAYVTQTTLSVDDT--- 177
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
L+ K + KF N IC ATQ RQDA+ K++ + D+ VVG NSSN+
Sbjct: 178 -ALITKALHDKFP----NIVAPKKADICYATQNRQDAV-KIIAPQCDVFFVVGSVNSSNS 231
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L+E+AE PSY ID+ I P W+ +G+ +IGIT+GAS
Sbjct: 232 NRLRELAERLKCPSYLIDNPDMINPA-----------------WI-EGKSSIGITAGASA 273
Query: 316 PDKAVEDVLKKVFEI 330
P+ V++V+ ++ E+
Sbjct: 274 PEVLVQNVINRLREL 288
>gi|392374111|ref|YP_003205944.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Candidatus
Methylomirabilis oxyfera]
gi|258591804|emb|CBE68105.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 [Candidatus
Methylomirabilis oxyfera]
Length = 330
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 132/311 (42%), Gaps = 64/311 (20%)
Query: 14 EEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVT 73
+E +++ EI+HN V L + + D V G +V+ A G + E
Sbjct: 33 DEPVYVRKEIVHNRHVVDELRKKGAIFV------DDLDEVPDGALVIYSAHGVSPEVRAQ 86
Query: 74 LNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNM 133
+K ++++D TCP V+KV K + ++ I+ G H+E + T A I V +
Sbjct: 87 AASKRLKVIDATCPLVTKVHNEAIKFAREGHSIILVGHKGHDEVIGTTGEAPDAITV--I 144
Query: 134 KEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETE 193
AE + ELN T KV + QTT+ +T
Sbjct: 145 GSAEQL------EELNVPDPT-----------------------KVAVITQTTLSLDDTT 175
Query: 194 EIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSS 253
I + RKF F S IC ATQ RQ A+ K + +VDLIL +G NSS
Sbjct: 176 GI----IDALRRKFPALA----FPSKEDICYATQNRQTAL-KELASRVDLILALGSQNSS 226
Query: 254 NTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGA 313
N+ L E+A+ G+ +Y ID I P WL +G IG+T+GA
Sbjct: 227 NSKRLIEVAKGVGVRAYLIDDVSEINPA-----------------WL-EGTRVIGVTAGA 268
Query: 314 STPDKAVEDVL 324
S P+ V+ V+
Sbjct: 269 SAPEHLVQGVV 279
>gi|206602112|gb|EDZ38594.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Leptospirillum
sp. Group II '5-way CG']
Length = 302
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 151/321 (47%), Gaps = 68/321 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
++I +EI+HN V K L E V++ V+E K+ V+KG +++ A G A E + +
Sbjct: 33 VFILHEIVHNTHVVKDLSERGVKS--VDEVKE----VDKG-TLIISAHGVAPEVIADARS 85
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+N++++DTTCP V K+ V+ + +YT + G+ +H+E + A +I +
Sbjct: 86 RNLEVIDTTCPLVWKIHRIVKALAEKNYTIFLLGERNHDEVMGVQGVAKDHIHI------ 139
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
F K P D V + +QTT +EI
Sbjct: 140 -------------------------FHKKEEIAHLPQTD-GPVALVSQTTQSIKYFDEIL 173
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+ ++ ++ ++ NTICDAT++RQ + + + +D+++ VG +S+N+
Sbjct: 174 DM----LLERYPQLEIH------NTICDATEKRQTSALAIAGD-MDVMITVGSMSSANSR 222
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
LQE++ SY +DS + ++W G+ +G+T+GASTP
Sbjct: 223 RLQEVSAGLCRASYLVDSANEVS-----------------DSWFKGGE-RVGVTAGASTP 264
Query: 317 DKAVEDVLKKVFEIKREEALQ 337
+ +E V++K+ EI R + +
Sbjct: 265 EWLIEGVIEKLMEISRAKGFE 285
>gi|237747754|ref|ZP_04578234.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Oxalobacter
formigenes OXCC13]
gi|229379116|gb|EEO29207.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Oxalobacter
formigenes OXCC13]
Length = 306
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 139/310 (44%), Gaps = 68/310 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V RL+EM I +EE D V G V++ A G +
Sbjct: 33 VYVRHEIVHNTHVVNRLKEMGA--IFIEE----LDEVPSGSVLIFSAHGVSQAIRKDAGT 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA--GKYIIVKNMK 134
+ +++ D TCP V+KV V K++K I+ G H E T A G Y++
Sbjct: 87 RQLKLFDATCPLVTKVHVEVAKNRKNGREIIVIGHKGHPEVEGTMGQADTGMYLV----- 141
Query: 135 EAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEE 194
+G S ++ L+ +PD + +QTT+ +T E
Sbjct: 142 --------------DGYSDIEQLKLD----------NPDA----LAYVSQTTLSVDDTAE 173
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
I + K R + + IC AT RQ+A+ K + EK LI+VVG NSSN
Sbjct: 174 I---IHKLKTRFPSIVEPKQ-----ADICYATTNRQEAV-KRLAEKASLIIVVGSRNSSN 224
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
++ L+EIAE G +Y +D+ +I WL +G IGIT+GAS
Sbjct: 225 SNRLREIAEKNGAKAYMVDNAGQIDMA-----------------WL-EGHNCIGITAGAS 266
Query: 315 TPDKAVEDVL 324
P+ V++V+
Sbjct: 267 APEILVQEVV 276
>gi|397661521|ref|YP_006502221.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Taylorella
equigenitalis ATCC 35865]
gi|394349700|gb|AFN35614.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Taylorella
equigenitalis ATCC 35865]
Length = 315
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 143/315 (45%), Gaps = 66/315 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V + L A I V+E D V +G +V+ A G ++
Sbjct: 39 IYVRHEIVHNRFVVQSLR--AKGAIFVDE----LDEVPEGSIVIFSAHGVSLNVRRDAEA 92
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA-GKYIIVKNMKE 135
+ +++ D TCP V+KV V+K + + I+ G H E T A G +V+ +++
Sbjct: 93 RGLRVFDATCPLVTKVHIEVKKMHEAGRSIIMIGHKGHPEVEGTLGQARGNMYLVETVED 152
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
+ + + DPD + QTT+ +T
Sbjct: 153 VQNL----------------------------EVPDPD----NLAYVTQTTLSVDDT--- 177
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
L+ K + KF N IC ATQ RQDA+ K++ + D+ VVG NSSN+
Sbjct: 178 -ALITKALHDKFP----NIVAPKKADICYATQNRQDAV-KIIAPQCDVFFVVGSVNSSNS 231
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L+E+AE PSY ID+ I P W+ +G+ +IGIT+GAS
Sbjct: 232 NRLRELAERLKCPSYLIDNPDMINPA-----------------WI-EGKSSIGITAGASA 273
Query: 316 PDKAVEDVLKKVFEI 330
P+ V++V+ ++ E+
Sbjct: 274 PEVLVQNVINRLREL 288
>gi|386773234|ref|ZP_10095612.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Brachybacterium
paraconglomeratum LC44]
Length = 334
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 152/336 (45%), Gaps = 79/336 (23%)
Query: 2 AFIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVL 61
A +A E + +E +++ +EI+HN V RL+E + VEE D V +G +V+
Sbjct: 21 AVVAVERALEHYDETVYVRHEIVHNKFVVDRLKEKGA--VFVEE----VDEVPEGALVIF 74
Query: 62 PAFGAA--VEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVA 119
A G + V EM +N++ +D TCP V+KV + + DY ++ G HEE
Sbjct: 75 SAHGISPKVREMA--EERNLRTIDATCPLVTKVHKEAVRFARQDYDILLVGHVGHEEVEG 132
Query: 120 TASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKV 179
TA A +++ + +NG + + DP+ KV
Sbjct: 133 TAGEAPEHVQI-----------------VNGPEDVDKVTVR----------DPE----KV 161
Query: 180 GIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMY 234
+QTT+ ET E V+ + E F + + IC ATQ RQ A+
Sbjct: 162 VWLSQTTLSVDETMET-------------VDRLKERFPTLQAPPSDDICYATQNRQVAIK 208
Query: 235 KMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGI-PSYWIDSEKRIGPGNKIAYKLMHGEL 293
K+ + DL+LVVG NSSN+ L E+A + G S+ IDS +
Sbjct: 209 KIAPD-ADLVLVVGSPNSSNSVRLMEVALEAGAKASHRIDSVSEL--------------- 252
Query: 294 VEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 329
+E W + ++G+TSGAS PD V+++L ++ E
Sbjct: 253 --REEWFEDVE-SVGVTSGASVPDVLVQELLAELAE 285
>gi|194292676|ref|YP_002008583.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Cupriavidus
taiwanensis LMG 19424]
gi|193226580|emb|CAQ72531.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Cupriavidus
taiwanensis LMG 19424]
Length = 332
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 137/326 (42%), Gaps = 70/326 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V + L++ + + ++ D V G V + A G + E + +
Sbjct: 33 VFVRHEIVHNKHVVQGLKDKGARFV------EELDEVPAGAVTIFSAHGVSREVVADASQ 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKE 135
+ + +D TCP V KV T ++ T I+ G H E T GK I+V+N
Sbjct: 87 RQLHAIDATCPLVIKVHTQGRQYAASGRTVILIGHAGHPEVEGTMGQIPGKVILVQN--- 143
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
EA + K D V QTT+ +T I
Sbjct: 144 --------------------EADVAKLDLP---------DDTPVAYVTQTTLSVDDTRNI 174
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNT--ICDATQERQDAMYKMVEEKVDLILVVGGWNSS 253
+ R+F + + +T IC ATQ RQ A+ + + D+ILV+G NSS
Sbjct: 175 ----IAALGRRF------SNLVGPDTRDICYATQNRQSAVRDLCK-LADVILVIGATNSS 223
Query: 254 NTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGA 313
N++ L+EI + G+PSY I + P W+ + +GIT+GA
Sbjct: 224 NSNRLREIGTESGVPSYLIAEGSELDPA-----------------WVRDANV-VGITAGA 265
Query: 314 STPDKAVEDVLKKVFEIKREEALQLA 339
S P+ VEDV+ + + E +A
Sbjct: 266 SAPEAMVEDVIAALRRLGPVEVSTMA 291
>gi|407714519|ref|YP_006835084.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
phenoliruptrix BR3459a]
gi|407236703|gb|AFT86902.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
phenoliruptrix BR3459a]
Length = 319
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 146/316 (46%), Gaps = 68/316 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V + L + I ++ + V G+ V+ A G + +
Sbjct: 43 IYVRHEIVHNAYVVEDLRKKGAIFI------ERLEEVPPGNTVIFSAHGVSKAVRSEAES 96
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYI-IVKNMKE 135
+ +++ D TCP V+KV V K ++ + ++ G H E T AG+ + +V+++++
Sbjct: 97 RGLRVYDATCPLVTKVHIEVAKMRQDGFDIVMIGHKGHPEVEGTMGQAGEGMHLVEDIED 156
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTM-LKGETEE 194
E + + DP+ ++ QTT+ + E
Sbjct: 157 VEAL----------------------------QLADPE----RIAFVTQTTLSVDDAAEI 184
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
IG L K ++ E IC ATQ RQDA+ K + + D+++VVG NSSN
Sbjct: 185 IGAL-------KAKYPSIREP--KKQDICYATQNRQDAV-KFMAPQCDVVIVVGSPNSSN 234
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
++ L+E+AE G+PSY +DS +I P W+ +G+ IG+T+GAS
Sbjct: 235 SNRLRELAEKLGVPSYMVDSPDQIDPA-----------------WV-EGKRRIGVTAGAS 276
Query: 315 TPDKAVEDVLKKVFEI 330
P+ + V+ ++ E+
Sbjct: 277 APEVLAQAVIARLREL 292
>gi|387782628|ref|YP_005793341.1| isoprenyl pyrophosphate/dimethylallyl diphosphate synthetase
[Helicobacter pylori 51]
gi|261838387|gb|ACX98153.1| isoprenyl pyrophosphate/dimethylallyl diphosphate synthetase
[Helicobacter pylori 51]
Length = 274
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 140/312 (44%), Gaps = 67/312 (21%)
Query: 19 ITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKN 78
I +IHN RLE+ N+ +EE K+ ++K V++ G +++ L NK
Sbjct: 30 IFGSLIHNAKEINRLEKNF--NVKIEEDPKK---ISKNKSVIIRTHGIPKQDLEYLKNKG 84
Query: 79 VQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEY 138
V+I D TCP+V K VE K Y ++ G +H E S+A +V
Sbjct: 85 VKITDATCPYVIKPQQIVESMSKEGYQIVLFGDINHPEVKGVISYATNQALV-------- 136
Query: 139 VCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKL 198
+N +E L++ KV + +QTT ++ KL
Sbjct: 137 ---------INSLEELQEKKLQR----------------KVALVSQTT------KQTPKL 165
Query: 199 VEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHL 258
++ + + VE E I FNTIC+AT Q A + +E VD+++VVGG SSNT L
Sbjct: 166 LQ---IASYLVERCTEVRI-FNTICNATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQL 220
Query: 259 QEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 318
IA+ SY ++ E + EL W KG+ GIT+GASTPD
Sbjct: 221 LSIAKQHCEDSYLVEDENEL-------------ELA----WF-KGKKLCGITAGASTPDW 262
Query: 319 AVEDVLKKVFEI 330
+E+V +K+ I
Sbjct: 263 IIENVKQKISTI 274
>gi|319943238|ref|ZP_08017521.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Lautropia
mirabilis ATCC 51599]
gi|319743780|gb|EFV96184.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Lautropia
mirabilis ATCC 51599]
Length = 374
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 143/316 (45%), Gaps = 68/316 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V L E I V+E D V G V+ A G + +
Sbjct: 76 IYVRHEIVHNDYVVSTLREKGA--IFVDE----LDEVPDGATVIFSAHGVSRAVRAEASG 129
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA--GKYIIVKNMK 134
+ +Q+ D TCP V+KV V K +K + I+ G H E T A G Y++
Sbjct: 130 RGLQVFDATCPLVTKVHVEVAKMRKEGHHVIMIGHAGHPEVEGTMGQADDGIYLV----- 184
Query: 135 EAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEE 194
EA +E+ + V +G V + QTT+ +
Sbjct: 185 -------------------ETEADVEQLQ--VPEG-------VSLAYVTQTTLSVDDC-- 214
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
+ V + + R+F +NE IC ATQ RQDA+ K + + DL+L++G +SSN
Sbjct: 215 --RTVIEALRRRF--PQINEP--KKQDICYATQNRQDAV-KFMAPQCDLVLIIGSPSSSN 267
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
++ L+E+AE G +Y I S ++ P WL +G+ +GI++GAS
Sbjct: 268 SNRLREVAERHGCEAYLIGSAAQLNPA-----------------WL-EGRKRVGISAGAS 309
Query: 315 TPDKAVEDVLKKVFEI 330
P+ V++++ ++ E+
Sbjct: 310 APEILVDELVARLREL 325
>gi|424589930|ref|ZP_18029377.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
CP1037(10)]
gi|408036092|gb|EKG72539.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
CP1037(10)]
Length = 316
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 145/318 (45%), Gaps = 67/318 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L++ + + ++ + V ++V+ A G +
Sbjct: 33 IYVRHEVVHNRFVVEGLKQRGARFV------EELNEVPDDNIVIFSAHGVSQAVRQEAKE 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++ + D TCP V+KV V + + ++ G H E T G+Y
Sbjct: 87 RSLTVFDATCPLVTKVHMEVARASRKHMEVVLIGHAGHPEVEGTM---GQY--------- 134
Query: 137 EYVCDYILGGELNGSSSTKEAFL-EKFKKAVS---KGFDPDVDLVKVGIANQTTMLKGET 192
+S T +L EK + VS K DP + +QTT+ ET
Sbjct: 135 --------------ASDTGGMYLVEKPEDVVSLQAKVKDPS----NLHYVSQTTLSVDET 176
Query: 193 EEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNS 252
++ + + + G + IC ATQ RQDA+ +++ E+VD+++VVG NS
Sbjct: 177 ADVIDELRRVFPKIQGPRK--------DDICYATQNRQDAV-RILAEQVDVMVVVGSKNS 227
Query: 253 SNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSG 312
SN++ L+E+AE G P Y ID + I PG W Q+ IG+T+G
Sbjct: 228 SNSTRLKELAEKLGTPGYLIDCPQDIDPG-----------------WFVDAQL-IGVTAG 269
Query: 313 ASTPDKAVEDVLKKVFEI 330
AS P++ V +L+++ E+
Sbjct: 270 ASAPEELVNQILERIKEL 287
>gi|167950718|ref|ZP_02537792.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Endoriftia
persephone 'Hot96_1+Hot96_2']
Length = 389
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 141/320 (44%), Gaps = 73/320 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L + I V+E + G+ V+ A G +
Sbjct: 34 IYVRHEVVHNRFVVESLRQRGA--IFVDE----LSDIPDGNTVIFSAHGVSQTVRQEAQR 87
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF------AGKYIIV 130
++++I D TCP V+KV V + + Y I+ G H E V T + + +V
Sbjct: 88 RDLRIFDATCPLVTKVHLEVARRCRDGYEVILIGHRGHPEVVGTMGQCRSKEESARIHLV 147
Query: 131 KNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKG 190
+ E +L S S++ AF+ QTT+
Sbjct: 148 VTPSDVE---------QLQISDSSRVAFV-----------------------TQTTLSID 175
Query: 191 ETEEIGKLVEKTMMRKF-GVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGG 249
+T LV + ++F +E + N IC ATQ RQDA+ K + E+ DL+LVVG
Sbjct: 176 DT----ALVIAALQQRFPNIEGPKK-----NDICYATQNRQDAV-KELAEQCDLVLVVGS 225
Query: 250 WNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGI 309
NSSN++ L EIA P+Y ID + I +WL G+ IG+
Sbjct: 226 PNSSNSNRLCEIARRHSTPAYLIDGAEDI-----------------DRSWL-AGKARIGV 267
Query: 310 TSGASTPDKAVEDVLKKVFE 329
++GAS P+ VE VL+++ E
Sbjct: 268 SAGASAPEVLVERVLERLQE 287
>gi|374609249|ref|ZP_09682045.1| hydroxymethylbutenyl pyrophosphate reductase [Mycobacterium tusciae
JS617]
gi|373552218|gb|EHP78828.1| hydroxymethylbutenyl pyrophosphate reductase [Mycobacterium tusciae
JS617]
Length = 333
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 139/319 (43%), Gaps = 75/319 (23%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V + L + I VEE D V +G +VV A G A V
Sbjct: 55 VYVRHEIVHNVHVVETLAKAGA--IFVEE----TDQVPEGSIVVFSAHGVAPTVHVEAAQ 108
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+N++ +D TCP V+KV ++ + DY ++ G HEE V TA A ++ V + +A
Sbjct: 109 RNLRTIDATCPLVTKVHNEAKRFARDDYDILLVGHTGHEEVVGTAGEAPDHVQVVDNPDA 168
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
K + DPD KV +QTT+ ET E
Sbjct: 169 -------------------------VDKVTVR--DPD----KVIWLSQTTLSVDETMET- 196
Query: 197 KLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGGWN 251
V + E F + + IC ATQ RQ A+ M E +L++VVG N
Sbjct: 197 ------------VRRLREKFPTLQDPPSDDICYATQNRQVAVKAMAPE-CELVIVVGSKN 243
Query: 252 SSNTSHLQEIAEDRGI-PSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGIT 310
SSN+ L E+A + G +Y +D I P WL G T+G+T
Sbjct: 244 SSNSVRLVEVALNAGSDAAYLVDYADDIDPA-----------------WL-DGVTTVGVT 285
Query: 311 SGASTPDKAVEDVLKKVFE 329
SGAS P+ V VL+++ E
Sbjct: 286 SGASVPELLVRGVLERLAE 304
>gi|171464045|ref|YP_001798158.1| hydroxymethylbutenyl pyrophosphate reductase [Polynucleobacter
necessarius subsp. necessarius STIR1]
gi|171193583|gb|ACB44544.1| hydroxymethylbutenyl pyrophosphate reductase [Polynucleobacter
necessarius subsp. necessarius STIR1]
Length = 313
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 139/313 (44%), Gaps = 64/313 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V L + + + V KG +VV A G + E
Sbjct: 39 IYVRHEIVHNVYVVNELRDKGAVFV------DELHEVPKGGIVVFSAHGVSQEVRKDAEA 92
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ Q+ D TCP V+KV V K K +T ++ G H E T + +KE
Sbjct: 93 RGFQVYDATCPLVTKVHLEVVKMCKEGFTVLMIGHAGHPEVEGT---------MGQVKEG 143
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
+ +E+ + F D KV QTT+ ET+EI
Sbjct: 144 VF-------------------LIERVGDVSALPFPTDE---KVAFVTQTTLSVDETKEI- 180
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+ + +KF N+ + IC ATQ RQDA+ K + +V++++VVG SSN++
Sbjct: 181 ---VEALTKKF--PNIVQP--RKQDICYATQNRQDAV-KFMAPQVEVVIVVGSTTSSNSN 232
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L+E+AE G+P+Y +DS +++ P W G+ +G+T+GAS P
Sbjct: 233 RLRELAEKLGVPAYMVDSPEQLKP-----------------EWF-AGKKRVGLTAGASAP 274
Query: 317 DKAVEDVLKKVFE 329
+ + ++ ++ E
Sbjct: 275 ESLAQSIVSRIQE 287
>gi|423208177|ref|ZP_17194731.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Aeromonas
veronii AER397]
gi|404619224|gb|EKB16140.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Aeromonas
veronii AER397]
Length = 311
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 151/321 (47%), Gaps = 75/321 (23%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAA--VEEMVTL 74
I++ +E++HN V +L+E + VEE D V +V+ A G A V EM
Sbjct: 33 IYVRHEVVHNRYVVNKLKEAGA--VFVEE----LDEVPDDSIVIFSAHGVAKTVREMA-- 84
Query: 75 NNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMK 134
++ +++ D TCP V+KV V + + +++ G H E + T G+Y +N +
Sbjct: 85 KSRALKVFDATCPLVTKVHMEVHRASRKGSEAVLIGHAGHPEVIGTM---GQY---ENRE 138
Query: 135 EAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEE 194
Y+ + + ++ K K +PD DL V QTT+ ET +
Sbjct: 139 GGMYLVE-----------TPEDVAKLKVK-------NPD-DLCFV---TQTTLSVDETSD 176
Query: 195 IGKLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGG 249
+ ++ + +HF + IC ATQ RQDA+ +M VD +LVVG
Sbjct: 177 V-------------IDALRKHFPKIQGPRKDDICYATQNRQDAVREMAG-LVDAMLVVGS 222
Query: 250 WNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGI 309
NSSN++ L+E+AE G +Y ID I +E+WL +G IG+
Sbjct: 223 RNSSNSNRLRELAEKVGARAYLIDDASMI-----------------EESWL-EGVKAIGV 264
Query: 310 TSGASTPDKAVEDVLKKVFEI 330
T+GAS P+ V++V+ ++ E+
Sbjct: 265 TAGASAPEVLVQNVIARLREL 285
>gi|167630001|ref|YP_001680500.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Heliobacterium
modesticaldum Ice1]
gi|167592741|gb|ABZ84489.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Heliobacterium
modesticaldum Ice1]
Length = 665
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 137/314 (43%), Gaps = 71/314 (22%)
Query: 23 IIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIV 82
+IHNP V +RL V+ + K + G +V+ + G E IV
Sbjct: 38 LIHNPQVVERLARQGVEEV------KDLAGASSGKLVIR-SHGVGPEVYEQAKQCGFDIV 90
Query: 83 DTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF-AGKYIIVKNMKEAEYVCD 141
D TCP+V KV + Y I+ G +H E ++ GK ++V + +EA+ + D
Sbjct: 91 DATCPFVHKVQKLAKDFTDQGYQVIVAGDRNHPEVQGIVAWTGGKALVVADEQEAKAL-D 149
Query: 142 YILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEK 201
L ++ KEA L + A+ GK +E
Sbjct: 150 LQGKAALIAQTTLKEATLRHIESALR----------------------------GKPIEL 181
Query: 202 TMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEI 261
+ NTIC AT +RQDA ++ E VD+++VVGG NSSNT+ L +I
Sbjct: 182 AVR---------------NTICAATSKRQDAARRLAAE-VDVMVVVGGRNSSNTAKLAQI 225
Query: 262 AEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVE 321
+ +P+Y +++ + P W +G+ G+T+GASTP +E
Sbjct: 226 CQGAAVPTYHVETADELDP-----------------EWF-QGKQKAGVTAGASTPRWIIE 267
Query: 322 DVLKKVFEIKREEA 335
+V++++ ++ +E+A
Sbjct: 268 EVVQRMTDVNQEQA 281
>gi|126666686|ref|ZP_01737663.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Marinobacter
sp. ELB17]
gi|126628731|gb|EAZ99351.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Marinobacter
sp. ELB17]
Length = 318
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 148/315 (46%), Gaps = 62/315 (19%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN +V L + I VEE V +V+ A G + +
Sbjct: 33 IYVRHEVVHNKSVVDNLRKRGA--IFVEE----LSEVPDDKLVIFSAHGVSQAVQKEAAD 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V ++ + ++ G + H E T G+Y
Sbjct: 87 RGLKVFDATCPLVTKVHIEVMRYSRDGSECVLIGHHGHPEVEGTM---GQY--------- 134
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDV-DLVKVGIANQTTMLKGETEEI 195
++ GG++ +L + + V+K DV + K+ QTT+ +T
Sbjct: 135 ----NFANGGDI---------YLVENEADVAK---LDVKNPEKLAYVTQTTLSMDDT--- 175
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
++++ + +E + + IC ATQ RQDA+ +M +E DL+LVVG NSSN+
Sbjct: 176 ARVIDALRAKFPKIEGPRK-----DDICYATQNRQDAVKQMADE-CDLMLVVGSPNSSNS 229
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L+E+AE G P+Y ID +I P WL G+ +IG+T+GAS
Sbjct: 230 NRLRELAERMGTPAYLIDEAAQIDPA-----------------WL-DGKKSIGVTAGASA 271
Query: 316 PDKAVEDVLKKVFEI 330
P+ V V+ ++ E+
Sbjct: 272 PEVLVSAVIARLREL 286
>gi|385677275|ref|ZP_10051203.1| hydroxymethylbutenyl pyrophosphate reductase [Amycolatopsis sp.
ATCC 39116]
Length = 397
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 131/309 (42%), Gaps = 66/309 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ EI+HN V L + + D V +G VV A G + +
Sbjct: 121 IYVRKEIVHNRHVVDGLRVRGAVFV------DELDAVPRGATVVFSAHGVSPAVRAKADR 174
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA-GKYIIVKNMKE 135
+ +++VD TCP V+KV + T ++ G HEE T A + ++V++++E
Sbjct: 175 RRLKVVDATCPLVTKVHAEARRFAGQGDTVLLIGHAGHEEVEGTLGEAPDRTVLVQSVEE 234
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
A V + DPD +V QTT+ ET E+
Sbjct: 235 ARRV----------------------------RVPDPD----RVTYLTQTTLSVDETAEV 262
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
L E + R+F + + IC AT RQD++ + V DL+LVVG NSSN+
Sbjct: 263 --LTE--LRRRFPALR----GPASDDICYATTNRQDSL-RSVARDTDLVLVVGSRNSSNS 313
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
L E+AE G P++ ID + + P WL G IG+T+GAS
Sbjct: 314 LRLVELAERAGTPAHLIDDARDVRP-----------------EWL-SGVERIGLTAGASA 355
Query: 316 PDKAVEDVL 324
P V+ V+
Sbjct: 356 PPGLVDSVV 364
>gi|298735947|ref|YP_003728472.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori B8]
gi|308183157|ref|YP_003927284.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori PeCan4]
gi|298355136|emb|CBI66008.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori B8]
gi|308065342|gb|ADO07234.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori PeCan4]
Length = 274
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 139/312 (44%), Gaps = 67/312 (21%)
Query: 19 ITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKN 78
I +IHN RLE+ N+ +EE K+ + K V++ G +++ L NK
Sbjct: 30 IFGSLIHNAKEINRLEKNF--NVKIEEDPKK---IPKNKSVIIRTHGIPKQDLEYLKNKG 84
Query: 79 VQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEY 138
V+I D TCP+V K VE K Y ++ G +H E S+A +V
Sbjct: 85 VKITDATCPYVIKPQQIVESMSKEGYQIVLFGDINHPEVKGVISYATNQALV-------- 136
Query: 139 VCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKL 198
+N +E L++ KV + +QTT ++ KL
Sbjct: 137 ---------INSLEELQEKKLQR----------------KVALVSQTT------KQTPKL 165
Query: 199 VEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHL 258
++ + + VE E I FNTIC+AT Q A + +E VD+++VVGG SSNT L
Sbjct: 166 LQ---IASYLVERCTEVRI-FNTICNATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQL 220
Query: 259 QEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 318
IA+ SY ++ E + EL W KG+ GIT+GASTPD
Sbjct: 221 LSIAKQHCKDSYLVEDENEL-------------ELA----WF-KGKKLCGITAGASTPDW 262
Query: 319 AVEDVLKKVFEI 330
+E+V +K+ I
Sbjct: 263 IIENVKQKISTI 274
>gi|345879180|ref|ZP_08830853.1| hypothetical protein Rifp1Sym_dr00130 [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|344223812|gb|EGV50242.1| hypothetical protein Rifp1Sym_dr00130 [endosymbiont of Riftia
pachyptila (vent Ph05)]
Length = 313
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 142/320 (44%), Gaps = 73/320 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L + I V+E + G+ V+ A G +
Sbjct: 34 IYVRHEVVHNRFVVESLRQRGA--IFVDE----LSDIPDGNTVIFSAHGVSQTVRQEAQR 87
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF------AGKYIIV 130
++++I D TCP V+KV V + + Y I+ G H E V T + + +V
Sbjct: 88 RDLRIFDATCPLVTKVHLEVARRCRDGYEVILIGHRGHPEVVGTMGQCRSKEESARIHLV 147
Query: 131 KNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKG 190
+ E +L S S++ AF+ QTT+
Sbjct: 148 VTPSDVE---------QLQISDSSRVAFV-----------------------TQTTLSID 175
Query: 191 ETEEIGKLVEKTMMRKF-GVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGG 249
+T LV + ++F +E + N IC ATQ RQDA+ K + E+ DL+LVVG
Sbjct: 176 DT----ALVIAALQQRFPNIEGPKK-----NDICYATQNRQDAV-KELAEQCDLVLVVGS 225
Query: 250 WNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGI 309
NSSN++ L EIA+ P+Y ID + I +WL G+ IG+
Sbjct: 226 PNSSNSNRLCEIAKKHSTPAYLIDGAEDI-----------------DRSWL-AGKARIGV 267
Query: 310 TSGASTPDKAVEDVLKKVFE 329
++GAS P+ VE VL+++ E
Sbjct: 268 SAGASAPEVLVERVLERLQE 287
>gi|77165221|ref|YP_343746.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nitrosococcus
oceani ATCC 19707]
gi|76883535|gb|ABA58216.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nitrosococcus
oceani ATCC 19707]
Length = 320
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 143/323 (44%), Gaps = 66/323 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V + L+ V I E+ + G V + A G + + T
Sbjct: 33 IYVLHEIVHNQHVVEDLQRRGV--IFTED----LASIPAGSVTIFSAHGVSTAVVETAKK 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKH-KKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKE 135
++Q++D TCP V+KV +K+ ++GD II G H E T
Sbjct: 87 NDLQVIDATCPLVTKVHLQAKKYYRQGDELIII-GHAGHPEVEGTR-------------- 131
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
G + G+ ++ E AV DP+ + QTT+ +T ++
Sbjct: 132 ----------GRVKGTVYVLDSVAEVENLAVK---DPE----HIAYVTQTTLSIDDTRDV 174
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
++K + G + IC ATQ RQ+A+ +M +KVD++LVVG NSSN+
Sbjct: 175 VDALKKRFPKIHGP--------GLDDICYATQNRQNAVREM-SKKVDILLVVGARNSSNS 225
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L+E+ E GI ++ I K + +W Q +GIT+GAST
Sbjct: 226 NRLREVGEQNGITAHLIQDAKDL-----------------DSSWF-TSQSRVGITAGAST 267
Query: 316 PDKAVEDVLKKVFEIKREEALQL 338
P+ V+ VL ++ EE + L
Sbjct: 268 PEILVQGVLNELRSYGVEEVMDL 290
>gi|358448468|ref|ZP_09158971.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Marinobacter
manganoxydans MnI7-9]
gi|357227256|gb|EHJ05718.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Marinobacter
manganoxydans MnI7-9]
Length = 317
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 139/319 (43%), Gaps = 70/319 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L I V+E D V +V+ A G +
Sbjct: 33 IYVRHEVVHNKFVVDNLRNRGA--IFVDE----LDEVPDDKLVIFSAHGVSQAVQNEAAR 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V ++ + ++ G + H E T G+Y
Sbjct: 87 RGLKVFDATCPLVTKVHLEVMRYSRDGRECVLIGHHGHPEVEGTM---GQY--------- 134
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI- 195
D+ GGE+ + ++A + K D K+ QTT+ +T +
Sbjct: 135 ----DHSNGGEIYLVENEEDAANLEVK-----------DPAKLSYVTQTTLSMDDTARVI 179
Query: 196 ----GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWN 251
K E RK + IC ATQ RQDA+ K + DL+LVVG N
Sbjct: 180 DALRAKFPEIQGPRK-------------DDICYATQNRQDAV-KQLAGDCDLMLVVGSPN 225
Query: 252 SSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITS 311
SSN++ L+E+AE G P+Y ID +I WL +G+ ++G+T+
Sbjct: 226 SSNSNRLRELAERMGTPAYLIDEASQIDAA-----------------WL-EGKTSVGVTA 267
Query: 312 GASTPDKAVEDVLKKVFEI 330
GAS P+ V DV+ ++ E+
Sbjct: 268 GASAPEVLVNDVITRLREL 286
>gi|399117148|emb|CCG19962.1| recname: full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
ec=1.17.1.2 [Taylorella asinigenitalis 14/45]
Length = 315
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 139/315 (44%), Gaps = 66/315 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V + L E I V+E D V +G +V+ A G +++
Sbjct: 39 IYVRHEIVHNRFVVQSLREKGA--IFVDE----LDEVPEGSIVIFSAHGVSLKVRQEAEA 92
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V+K + + I+ G H E T A NM
Sbjct: 93 RGLRVFDATCPLVTKVHIEVKKMHEAGRSVIMIGHKGHPEVEGTLGQARG-----NMYLV 147
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFD-PDVDLVKVGIANQTTMLKGETEEI 195
E V D D P+ D + QTT+ +T
Sbjct: 148 ETVEDV-------------------------HNLDIPNTD--NLAYVTQTTLSVDDT--- 177
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
L+ K + KF N IC ATQ RQDA+ K++ + D+ VVG NSSN+
Sbjct: 178 -ALITKALHEKFP----NIIAPKKADICYATQNRQDAV-KIIAPQCDVFFVVGSTNSSNS 231
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L+E+AE PSY ID I P W+ +G+ +IGIT+GAS
Sbjct: 232 NRLRELAERLNCPSYLIDDPDMIKP-----------------EWI-EGKKSIGITAGASA 273
Query: 316 PDKAVEDVLKKVFEI 330
P+ V++V+ ++ E+
Sbjct: 274 PEVLVQNVINRLREM 288
>gi|357018876|ref|ZP_09081136.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
thermoresistibile ATCC 19527]
gi|356481197|gb|EHI14305.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
thermoresistibile ATCC 19527]
Length = 334
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 145/318 (45%), Gaps = 73/318 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V + L + I V+E D V +G++VV A G A V
Sbjct: 55 VYVRHEIVHNRHVVETLAKAGA--IFVDE----TDEVPEGEIVVFSAHGVAPSVHVNAAE 108
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+N++++D TCP V+KV ++ + DY ++ G HEE + TA A ++ + + EA
Sbjct: 109 RNLKVIDATCPLVTKVHNEAKRFARDDYDILLIGHEGHEEVIGTAGEAPDHVQIVDGPEA 168
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
D + + N KV +QTT+ ET EI
Sbjct: 169 ---VDKVTVRDEN----------------------------KVIWLSQTTLSVDETMEI- 196
Query: 197 KLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGGWN 251
V+ + E F + IC ATQ RQ A+ M E +L++VVG N
Sbjct: 197 ------------VQKLRERFPKLQDPPSDDICYATQNRQVAVKAMAPE-CELVIVVGSAN 243
Query: 252 SSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITS 311
SSN+ L E+A +G G A+ + + + ++ + WL +G T+G+TS
Sbjct: 244 SSNSVRLVEVA---------------LGAGADAAHLVDYADDIDPQ-WL-EGVTTVGVTS 286
Query: 312 GASTPDKAVEDVLKKVFE 329
GAS P+ V VL+++ E
Sbjct: 287 GASVPEILVRGVLERLAE 304
>gi|330818059|ref|YP_004361764.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
gladioli BSR3]
gi|327370452|gb|AEA61808.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
gladioli BSR3]
Length = 326
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 143/314 (45%), Gaps = 64/314 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V + L++ I VEE + V G+ V+ A G + +
Sbjct: 48 IYVRHEIVHNKYVVEDLKKKGA--IFVEE----LEEVPSGNTVIFSAHGVSKAVRDEADV 101
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ ++I D TCP V+KV V K ++ ++ G H E T + + M
Sbjct: 102 RGLRIYDATCPLVTKVHVEVAKMRQDGVDIVMIGHKGHPEVEGTMGQ-----VERGMHLV 156
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
E V D +L EL DP+ +V + QTT+ + EI
Sbjct: 157 ESVED-VLALELP---------------------DPE----RVALVTQTTLSVDDAAEI- 189
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+ RKF + E IC ATQ RQDA+ K + + D+++VVG NSSN+S
Sbjct: 190 ---IAALKRKF--PAIREP--KKQDICYATQNRQDAV-KFMAPQCDVVIVVGSPNSSNSS 241
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L+E+AE RG+ +Y +DS +I P W+ G+ IG+T+GAS P
Sbjct: 242 RLREVAEKRGVEAYMVDSPDQINPA-----------------WV-AGKRRIGVTAGASAP 283
Query: 317 DKAVEDVLKKVFEI 330
+ + V+ ++ E+
Sbjct: 284 EVLAQAVIARLREL 297
>gi|302389719|ref|YP_003825540.1| hydroxymethylbutenyl pyrophosphate reductase [Thermosediminibacter
oceani DSM 16646]
gi|302200347|gb|ADL07917.1| hydroxymethylbutenyl pyrophosphate reductase [Thermosediminibacter
oceani DSM 16646]
Length = 672
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 148/320 (46%), Gaps = 72/320 (22%)
Query: 15 EKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTL 74
EK + I+HN V +++E + V+ + D +++G++V+ G + +
Sbjct: 30 EKTYTLGPIVHNQQVVEKMENLGVKAV-------DLDDISEGNLVI-RTHGVPPDVIEQA 81
Query: 75 NNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA-GKYIIVKNM 133
K + ++D TCP+V KV + D T +I G +H E + G+ ++++N
Sbjct: 82 RQKGLNVIDATCPFVKKVQKLARDISEKDCTVVIIGDPNHPEVKGIKGWCPGEAVVIENE 141
Query: 134 KEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETE 193
++A ++ F +K +VG+ QTT + +
Sbjct: 142 EDA------------------RKFFTDK----------------RVGVVVQTTQTEENVK 167
Query: 194 EIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSS 253
+I ++++ + F +NT C+AT +RQ A K V E V+++LVVGG NSS
Sbjct: 168 KIMDILKEKLDLAF----------FYNTRCNATHQRQKAAKK-VAESVEVMLVVGGKNSS 216
Query: 254 NTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGA 313
NT L ++ ++ G Y I++ I K+ W +G +GIT+GA
Sbjct: 217 NTKKLAQVCQNVGAKVYHIETADEI-----------------KKEWF-RGVEKVGITAGA 258
Query: 314 STPDKAVEDVLKKVFEIKRE 333
STPD +++V+ K+ EI RE
Sbjct: 259 STPDWIIKEVISKMEEISRE 278
>gi|18310067|ref|NP_562001.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
perfringens str. 13]
gi|20138569|sp|P58675.1|ISPH_CLOPE RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|18144746|dbj|BAB80791.1| probable lysis tolerance protein [Clostridium perfringens str. 13]
Length = 282
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 148/326 (45%), Gaps = 67/326 (20%)
Query: 5 AYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAF 64
A + +K+F + KI+ +IHN V LE+ + I + + D + KGDVV++ +
Sbjct: 24 AIKYQKEFGK-KIYTLGPLIHNNDVVNYLEDNNIFAIELSDA----DSLKKGDVVLIRSH 78
Query: 65 GAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA 124
G + L +K + + + TCP+V+ + V+K + Y II G +H E + +
Sbjct: 79 GVKESVIKDLTDKGLIVKNATCPYVTNIQLKVKKCYEQGYKIIIVGDKNHPEVIGINGWC 138
Query: 125 GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQ 184
I+ N K LE KV + +Q
Sbjct: 139 NDSAIITNGKTE----------------------LENIP-------------AKVCVVSQ 163
Query: 185 TTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLI 244
TT E +E V ++R ++ ++FNTIC AT RQ ++ ++ +E DL+
Sbjct: 164 TT----EKKETWNKVLNEIVR------ASKEIVAFNTICSATDVRQKSVQELSKE-ADLV 212
Query: 245 LVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQ 304
V+GG NSSNT+ L EI + SY I++ K + L+ E V+
Sbjct: 213 FVIGGKNSSNTTKLYEICKKECPKSYHIENVKELDES------LLEDESVK--------- 257
Query: 305 ITIGITSGASTPDKAVEDVLKKVFEI 330
TIGIT+GASTPD + +V+ K+ E+
Sbjct: 258 -TIGITAGASTPDWIINEVISKIKEL 282
>gi|227497817|ref|ZP_03928002.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Actinomyces
urogenitalis DSM 15434]
gi|226832777|gb|EEH65160.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Actinomyces
urogenitalis DSM 15434]
Length = 350
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 138/315 (43%), Gaps = 65/315 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ EI+HN V + L + + + D V +G VV A G + V
Sbjct: 51 IYVRKEIVHNKYVVEALSQRGAVFV------SETDEVPEGARVVFSAHGVSPAVHVQAEA 104
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++Q +D TCP V+KV + DY I+ G HEE T A ++I V
Sbjct: 105 RHLQTIDATCPLVTKVHKQAVRFAHDDYDIILVGHTGHEEVEGTQGEAPEHIQV------ 158
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
+NG + + DP KV +QTT+ ET E
Sbjct: 159 -----------VNGPHEVDQVQVR----------DPQ----KVVWISQTTLSVDETMETV 193
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+L+ + + + + IC ATQ RQ A+ K + +VD+++VVG NSSN+
Sbjct: 194 RLLRERFPQMIDPPS--------DDICYATQNRQVAV-KTIAPQVDVMIVVGSGNSSNSV 244
Query: 257 HLQEIAEDRGIP-SYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
L+E+A + G P +Y +D I P WL +G T+G+TSGAS
Sbjct: 245 RLKEVALEAGAPAAYRVDYASEIDP-----------------VWL-EGAQTVGLTSGASV 286
Query: 316 PDKAVEDVLKKVFEI 330
P+ V DV+ ++ E+
Sbjct: 287 PEILVRDVVSRLGEL 301
>gi|158312701|ref|YP_001505209.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Frankia sp.
EAN1pec]
gi|158108106|gb|ABW10303.1| hydroxymethylbutenyl pyrophosphate reductase [Frankia sp. EAN1pec]
Length = 338
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 135/309 (43%), Gaps = 65/309 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +I+HN V K LE A I VEE D V G VV A G A ++
Sbjct: 52 VYVRKQIVHNAHVVKTLE--AKGAIFVEE----TDEVPHGATVVFSAHGVAPTVHEEASS 105
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ ++ +D TCP V+KV + + K D ++ G HEE V T A I
Sbjct: 106 RQLRTIDATCPLVTKVHSEARRFAKEDLDILLIGHEGHEEVVGTTGQAPDRI-------- 157
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
+++ G + A K DP +V +QTT+ ET+
Sbjct: 158 -----HLVDGPEDA--------------AAVKVRDPK----RVAFLSQTTLSVDETQTTV 194
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
K + + G + + IC ATQ RQ A+ K + EKVDL++VVG NSSN+
Sbjct: 195 KALRERFPHLQGPPS--------DDICYATQNRQVAV-KEIAEKVDLLIVVGSPNSSNSV 245
Query: 257 HLQEIAEDRGIP-SYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
L E+A D G P S+ +D + E WL G T+G+TSGAS
Sbjct: 246 RLVEVALDAGAPKSFLVDDCSEV-----------------DEGWL-DGVETVGVTSGASV 287
Query: 316 PDKAVEDVL 324
P++ V V+
Sbjct: 288 PEELVTGVM 296
>gi|110799385|ref|YP_695787.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
perfringens ATCC 13124]
gi|168214962|ref|ZP_02640587.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
perfringens CPE str. F4969]
gi|170764024|ref|ZP_02900192.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
perfringens B str. ATCC 3626]
gi|422345789|ref|ZP_16426703.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
perfringens WAL-14572]
gi|422873985|ref|ZP_16920470.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
perfringens F262]
gi|122958919|sp|Q0TRF3.1|ISPH_CLOP1 RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|110674032|gb|ABG83019.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
perfringens ATCC 13124]
gi|170710009|gb|EDT22191.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
perfringens B str. ATCC 3626]
gi|170713589|gb|EDT25771.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
perfringens CPE str. F4969]
gi|373227454|gb|EHP49768.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
perfringens WAL-14572]
gi|380304980|gb|EIA17263.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
perfringens F262]
Length = 282
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 148/326 (45%), Gaps = 67/326 (20%)
Query: 5 AYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAF 64
A + +K+F + KI+ +IHN V LE+ + I + + D + KGDVV++ +
Sbjct: 24 AIKYQKEFGK-KIYTLGPLIHNNDVVNYLEDNDIFAIELSDA----DSLKKGDVVLIRSH 78
Query: 65 GAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA 124
G + L +K + + + TCP+V+ + V+K + Y II G +H E + +
Sbjct: 79 GVKESVIKDLTDKGLIVKNATCPYVTNIQLKVKKCYEQGYKIIIVGDENHPEVIGINGWC 138
Query: 125 GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQ 184
I+ N K LE KV + +Q
Sbjct: 139 NDSAIITNGKTE----------------------LENIP-------------AKVCVVSQ 163
Query: 185 TTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLI 244
TT E +E V ++R ++ ++FNTIC AT RQ ++ ++ +E DL+
Sbjct: 164 TT----EKKETWNKVLNEIVR------ASKEIVAFNTICSATDVRQKSVQELSKE-ADLV 212
Query: 245 LVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQ 304
V+GG NSSNT+ L EI + SY I++ K + L+ E V+
Sbjct: 213 FVIGGKNSSNTTKLYEICKKECPKSYHIENVKELDES------LLEDESVK--------- 257
Query: 305 ITIGITSGASTPDKAVEDVLKKVFEI 330
TIGIT+GASTPD + +V+ K+ E+
Sbjct: 258 -TIGITAGASTPDWIINEVISKIKEL 282
>gi|348589909|ref|YP_004874371.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Taylorella
asinigenitalis MCE3]
gi|347973813|gb|AEP36348.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Taylorella
asinigenitalis MCE3]
Length = 315
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 141/317 (44%), Gaps = 70/317 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V + L E I V+E D V +G +V+ A G +++
Sbjct: 39 IYVRHEIVHNRFVVQSLREKGA--IFVDE----LDEVPEGSIVIFSAHGVSLKVRQEAEA 92
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V+K + + I+ G H E T A NM
Sbjct: 93 RGLRVFDATCPLVTKVHIEVKKMHEAGRSVIMIGHKGHPEVEGTLGQARG-----NMYLV 147
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFD-PDVDLVKVGIANQTTMLKGETEEI 195
E V D D P+ D + QTT+ +T
Sbjct: 148 ETVEDV-------------------------HNLDIPNTD--NLAYVTQTTLSVDDT--- 177
Query: 196 GKLVEKTMMRKFGVENVNEHFISFN--TICDATQERQDAMYKMVEEKVDLILVVGGWNSS 253
L+ K + KF + I+ IC ATQ RQDA+ K++ + D+ VVG NSS
Sbjct: 178 -ALITKALHEKF------PNIIAPKKADICYATQNRQDAV-KIIAPQCDVFFVVGSTNSS 229
Query: 254 NTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGA 313
N++ L+E+AE PSY ID I P W+ +G+ +IGIT+GA
Sbjct: 230 NSNRLRELAERLNCPSYLIDDPDMIKP-----------------EWI-EGKKSIGITAGA 271
Query: 314 STPDKAVEDVLKKVFEI 330
S P+ V++V+ ++ E+
Sbjct: 272 SAPEVLVQNVINRLREM 288
>gi|251773108|gb|EES53662.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Leptospirillum
ferrodiazotrophum]
Length = 302
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 143/324 (44%), Gaps = 74/324 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDV--VNKGDVVVLPAFGAAVEEMVTL 74
I++ +EI+HN V L V ++ DV V++G +++ A G A +
Sbjct: 33 IFVLHEIVHNTHVVNDLANRGVHSVD--------DVAEVSEGTLII-SAHGVAPSVIADA 83
Query: 75 NNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMK 134
++ + +VDTTCP VSK+ V+ +YT ++ G+ SH+E + A +I + + K
Sbjct: 84 KSRQLDVVDTTCPLVSKIHRIVKALADKNYTILLLGEKSHDEVMGVQGHAKDHIHIFHRK 143
Query: 135 EAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTM-LKGETE 193
E E+ G T V + +QTT +K E
Sbjct: 144 E-----------EIPGLPMTDG---------------------PVALVSQTTQSIKYFDE 171
Query: 194 EIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSS 253
+ LVE+ + NTICDAT++RQ + + +D+++ VG +S+
Sbjct: 172 ILALLVERYPQLEV-----------HNTICDATEKRQTSALA-IAGNMDVMITVGSMSSA 219
Query: 254 NTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGA 313
N+ LQE+A SY +D + + W GQ +G+T+GA
Sbjct: 220 NSRRLQEVAGGLCPASYLVDKATDV-----------------QAEWF-TGQERVGVTAGA 261
Query: 314 STPDKAVEDVLKKVFEIKREEALQ 337
STPD +E V+ ++ EI RE ++
Sbjct: 262 STPDYLIEGVIDRLMEISRERGME 285
>gi|385249512|ref|YP_005777731.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori F57]
gi|420395093|ref|ZP_14894323.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori CPY1124]
gi|420401451|ref|ZP_14900646.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori CPY6081]
gi|420403854|ref|ZP_14903039.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori CPY6261]
gi|317182307|dbj|BAJ60091.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori F57]
gi|393015365|gb|EJB16532.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori CPY1124]
gi|393018726|gb|EJB19872.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori CPY6261]
gi|393019562|gb|EJB20704.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori CPY6081]
Length = 274
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 139/312 (44%), Gaps = 67/312 (21%)
Query: 19 ITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKN 78
I +IHN RLE+ N+ +EE K+ + K V++ G +++ L NK
Sbjct: 30 IFGSLIHNAKEINRLEKNF--NVKIEEDPKK---IPKNKSVIIRTHGIPKQDLEYLKNKG 84
Query: 79 VQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEY 138
V+I D TCP+V K VE K Y ++ G +H E S+A +V
Sbjct: 85 VKITDATCPYVIKPQQIVESMSKEGYQIVLFGDINHPEVKGVISYATNQALV-------- 136
Query: 139 VCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKL 198
+N +E L++ KV + +QTT ++ KL
Sbjct: 137 ---------INSLEELQEKKLQR----------------KVALVSQTT------KQTPKL 165
Query: 199 VEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHL 258
++ + + VE E I FNTIC+AT Q A + +E VD+++VVGG SSNT L
Sbjct: 166 LQ---IASYLVERCTEVRI-FNTICNATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQL 220
Query: 259 QEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 318
IA+ SY ++ E + EL W KG+ GIT+GASTPD
Sbjct: 221 LSIAKQHCEDSYLVEDENEL-------------ELA----WF-KGKKLCGITAGASTPDW 262
Query: 319 AVEDVLKKVFEI 330
+E+V +K+ I
Sbjct: 263 IIENVKQKISTI 274
>gi|420407223|ref|ZP_14906392.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori CPY6311]
gi|393022557|gb|EJB23678.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori CPY6311]
Length = 274
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 139/312 (44%), Gaps = 67/312 (21%)
Query: 19 ITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKN 78
I +IHN RLE+ N+ +EE K+ + K V++ G +++ L NK
Sbjct: 30 IFGSLIHNAKEINRLEKNF--NVKIEEDPKK---IPKNKSVIIRTHGIPKQDLEYLKNKG 84
Query: 79 VQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEY 138
V+I D TCP+V K VE K Y ++ G +H E S+A +V
Sbjct: 85 VKITDATCPYVIKPQQIVESMSKEGYQIVLFGDINHPEVKGVISYATNQALV-------- 136
Query: 139 VCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKL 198
+N +E L++ KV + +QTT ++ KL
Sbjct: 137 ---------VNSLEELQEKKLQR----------------KVALVSQTT------KQTPKL 165
Query: 199 VEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHL 258
++ + + VE E I FNTIC+AT Q A + +E VD+++VVGG SSNT L
Sbjct: 166 LQ---IASYLVERCTEVRI-FNTICNATSYNQKAALDLSKE-VDIMIVVGGRTSSNTKQL 220
Query: 259 QEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 318
IA+ SY ++ E + EL W KG+ GIT+GASTPD
Sbjct: 221 LSIAKQHCEDSYLVEDENEL-------------ELA----WF-KGKKLCGITAGASTPDW 262
Query: 319 AVEDVLKKVFEI 330
+E+V +K+ I
Sbjct: 263 IIENVKQKISTI 274
>gi|262169984|ref|ZP_06037674.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
RC27]
gi|262021718|gb|EEY40429.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
RC27]
Length = 316
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 145/318 (45%), Gaps = 67/318 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L++ + + ++ + V ++V+ A G +
Sbjct: 33 IYVRHEVVHNRFVVEGLKQRGARFV------EELNEVPDDNIVIFSAHGVSQAVRQEAKE 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++ + D TCP V+KV V + + ++ G H E T G+Y
Sbjct: 87 RSLTVFDATCPLVTKVHMEVARASRKHMEVVLIGHAGHPEVEGTM---GQY--------- 134
Query: 137 EYVCDYILGGELNGSSSTKEAFL-EKFKKAVS---KGFDPDVDLVKVGIANQTTMLKGET 192
+S T +L EK + VS K DP + +QTT+ ET
Sbjct: 135 --------------ASDTGGMYLVEKPEDVVSLQAKVKDPS----NLHYVSQTTLSVDET 176
Query: 193 EEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNS 252
++ + + + G + IC ATQ RQDA+ +++ E+VD+++VVG NS
Sbjct: 177 ADVIDELRRVFPKIQGPRK--------DDICYATQNRQDAV-RILAEQVDVMVVVGSKNS 227
Query: 253 SNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSG 312
SN++ L+E+AE G P Y ID + I PG + +L IG+T+G
Sbjct: 228 SNSTRLKELAEKLGTPGYLIDCPQDIDPGGFVDAQL------------------IGVTAG 269
Query: 313 ASTPDKAVEDVLKKVFEI 330
AS P++ V +L+++ E+
Sbjct: 270 ASAPEELVNQILERIKEL 287
>gi|147673232|ref|YP_001216180.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
O395]
gi|227117060|ref|YP_002818956.1| lytB protein [Vibrio cholerae O395]
gi|146315115|gb|ABQ19654.1| hydroxymethylbutenyl pyrophosphate reductase [Vibrio cholerae O395]
gi|227012510|gb|ACP08720.1| lytB protein [Vibrio cholerae O395]
Length = 320
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 145/318 (45%), Gaps = 67/318 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L++ + + ++ + V ++V+ A G +
Sbjct: 37 IYVRHEVVHNRFVVEGLKQRGARFV------EELNEVPDDNIVIFSAHGVSQAVRQEAKE 90
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++ + D TCP V+KV V + + ++ G H E T G+Y
Sbjct: 91 RSLTVFDATCPLVTKVHMEVARASRKHMEVVLIGHAGHPEVEGTM---GQY--------- 138
Query: 137 EYVCDYILGGELNGSSSTKEAFL-EKFKKAVS---KGFDPDVDLVKVGIANQTTMLKGET 192
+S T +L EK + VS K DP + +QTT+ ET
Sbjct: 139 --------------ASDTGGMYLVEKPEDVVSLQAKVKDPS----NLHYVSQTTLSVDET 180
Query: 193 EEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNS 252
++ + + + G + IC ATQ RQDA+ +++ E+VD+++VVG NS
Sbjct: 181 ADVIDELRRVFPKIQGPRK--------DDICYATQNRQDAV-RILAEQVDVMVVVGSKNS 231
Query: 253 SNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSG 312
SN++ L+E+AE G P Y ID + I PG + +L IG+T+G
Sbjct: 232 SNSTRLKELAEKLGTPGYLIDCPQDIDPGGFVDAQL------------------IGVTAG 273
Query: 313 ASTPDKAVEDVLKKVFEI 330
AS P++ V +L+++ E+
Sbjct: 274 ASAPEELVNQILERIKEL 291
>gi|113868985|ref|YP_727474.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ralstonia
eutropha H16]
gi|113527761|emb|CAJ94106.1| penicillin tolerance protein [Ralstonia eutropha H16]
Length = 308
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 134/319 (42%), Gaps = 74/319 (23%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V L + ++ D V G V+ A G + E
Sbjct: 29 IYVRHEIVHNAYVVAGLRRKGAVFV------RELDEVPAGATVIFSAHGVSREVRADAAA 82
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ + + D TCP V+KV V K + ++ G H E T A +++
Sbjct: 83 RGLHVFDATCPLVTKVHVEVSKMRAEGCEIVMIGHRGHPEVEGTMGQASSGMLL-----V 137
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
E V D A + DP ++ QTT+ ET EI
Sbjct: 138 ESVADV----------------------ATLQVTDPS----RLAYVTQTTLSVDETREI- 170
Query: 197 KLVEKTMMRKFGVENVNEHFISFN-----TICDATQERQDAMYKMVEEKVDLILVVGGWN 251
V + F IC ATQ RQDA+ K + +V++++VVG N
Sbjct: 171 ------------VAALKARFPQIREPKKQDICYATQNRQDAV-KFMAPQVEVVIVVGSPN 217
Query: 252 SSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITS 311
SSN++ L+E+AE G+P+Y +D+ +++ P W+ G+ IG+T+
Sbjct: 218 SSNSNRLRELAERLGVPAYMVDAPEQVRP-----------------EWI-AGKRRIGLTA 259
Query: 312 GASTPDKAVEDVLKKVFEI 330
GAS P+ + +++++ E+
Sbjct: 260 GASAPEALAQSIVERLREL 278
>gi|332297477|ref|YP_004439399.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
brennaborense DSM 12168]
gi|332180580|gb|AEE16268.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Treponema
brennaborense DSM 12168]
Length = 310
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 136/323 (42%), Gaps = 57/323 (17%)
Query: 8 ARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAA 67
A + +++ +IHN T L VQ + E+ + V GDVVV+ A G
Sbjct: 29 ALADYDGRRVYTLGPLIHNKTALDSLAARGVQVLDAEDMHR----VQSGDVVVIRAHGVP 84
Query: 68 VEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAG-- 125
L + ++D TCP V YT +I G +H E A +A
Sbjct: 85 PAVRAQLAARGCTVIDATCPRVLLSQRRAADFAAKGYTVVIAGDKNHGEVTGIAGYAADP 144
Query: 126 -----KYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVG 180
+ ++V+N ++A+ + A L + +A V VK
Sbjct: 145 ATGESRCLLVENREDAQRLV----------------AALTETARAAGAPQVKVVQPVKAV 188
Query: 181 IANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEK 240
+ +QTT+ + E + I ++ + G+ ++ FNTIC AT ERQ+A+ + +
Sbjct: 189 LISQTTISRSEYDAIAGVL------RAGITDLR----VFNTICPATMERQEALRDLCVQ- 237
Query: 241 VDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWL 300
VD +LVVGG NS+NTS L A + + I++ I P + +
Sbjct: 238 VDGVLVVGGKNSANTSRLLMSARELCRRAALIETADEIPPDFRSLDR------------- 284
Query: 301 PKGQITIGITSGASTPDKAVEDV 323
IG+T+GASTPD ++ V
Sbjct: 285 ------IGLTAGASTPDAVIDAV 301
>gi|290968708|ref|ZP_06560246.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Megasphaera
genomosp. type_1 str. 28L]
gi|335049631|ref|ZP_08542618.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Megasphaera sp.
UPII 199-6]
gi|290781361|gb|EFD93951.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Megasphaera
genomosp. type_1 str. 28L]
gi|333762366|gb|EGL39864.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Megasphaera sp.
UPII 199-6]
Length = 635
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 138/305 (45%), Gaps = 72/305 (23%)
Query: 23 IIHNPTVNKRLEEMAVQNI-PVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQI 81
IIHNP V +E +A Q + PV+ ++ V+ G V++ + G + K+V+I
Sbjct: 35 IIHNPQV---VETLATQGVAPVQSLQE----VDNGSTVLIRSHGVGPQVYEEAKEKHVKI 87
Query: 82 VDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA-GKYIIVKNMKEAEYVC 140
VD TCP V K +K + +I G+ SH E ++ + + + II+ +EA+ +
Sbjct: 88 VDATCPHVKKAQQDAKKIVFAEKKLVIIGEKSHPEVISISQWGVNRAIIIDKEEEAQEI- 146
Query: 141 DYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVE 200
F E G+ QTT + + + I ++++
Sbjct: 147 ----------------PFCEDM-----------------GVVVQTTFSQEKFKRIVRILQ 173
Query: 201 KTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQE 260
H + TIC ATQ+RQ+A + +VD ++VVGG NS+NT L +
Sbjct: 174 TK----------TNHLETHMTICTATQQRQEAAIALAR-RVDAMIVVGGKNSANTGRLAQ 222
Query: 261 IAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAV 320
+ ++ P+Y +++ + I P +W G IGIT+GASTPD +
Sbjct: 223 VCREQDCPTYHVETAREINP-----------------SWF-HGMSYIGITAGASTPDWII 264
Query: 321 EDVLK 325
++V+K
Sbjct: 265 QEVVK 269
>gi|406876489|gb|EKD26038.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, partial
[uncultured bacterium]
Length = 263
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 148/314 (47%), Gaps = 71/314 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNK--GDVVVLPAFGAAVEEMVTL 74
+ I +++HNP K+L + +Q I F +NK V++ A GA + L
Sbjct: 17 LTIAGQLVHNPQTVKKLLDYGIQMI------DNFSSINKIKTKRVMITAHGAPKKIKTLL 70
Query: 75 NNKNVQIVDTTCPWVSKVWTSVEKH-KKGDYTSIIHGKYSHEETVATASFAGKYIIVKNM 133
+ + D TCP VSKV +++ KKG Y +I H E V G ++
Sbjct: 71 KKEGFTVEDATCPLVSKVHKTIKNMVKKGLYPVVI----GHPEHVEVKGIRG------DL 120
Query: 134 KEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETE 193
K++ +++ E + S LE K ++GI +QTT E E
Sbjct: 121 KDS-----FVVFNEDDLSK------LENLNKK------------RLGIVSQTT---NEPE 154
Query: 194 EIGKLVEKTMMRKFGVENVNEHFISF-NTICDATQERQDAMYKMVEEKVDLILVVGGWNS 252
+ KLVEK K N ++ F NT+C T++RQ A+ ++ +E V++++V+GG+NS
Sbjct: 155 VVEKLVEKIKALK------NVEYVEFANTVCKPTRDRQKAVDELAKE-VEMMIVIGGYNS 207
Query: 253 SNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSG 312
SNT L +I E R IP + I++ + K+ W K ++GIT+G
Sbjct: 208 SNTKKLLKICEKRNIPGHHIENSSEL-----------------KKEWF-KDIKSVGITAG 249
Query: 313 ASTPDKAVEDVLKK 326
STP + +E+V +K
Sbjct: 250 TSTPLEVIEEVHEK 263
>gi|68165320|gb|AAY87620.1| LytB [Vibrio cholerae]
gi|68165350|gb|AAY87635.1| LytB [Vibrio cholerae]
Length = 280
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 145/318 (45%), Gaps = 67/318 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L++ + + ++ + V ++V+ A G +
Sbjct: 25 IYVRHEVVHNRFVVEGLKQRGARFV------EELNEVPDDNIVIFSAHGVSQAVRQEAKE 78
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++ + D TCP V+KV V + + ++ G H E T G+Y
Sbjct: 79 RSLTVFDATCPLVTKVHMEVARASRKHMEVVLIGHAGHPEVEGTM---GQY--------- 126
Query: 137 EYVCDYILGGELNGSSSTKEAFL-EKFKKAVS---KGFDPDVDLVKVGIANQTTMLKGET 192
+S T +L EK + VS K DP + +QTT+ ET
Sbjct: 127 --------------ASDTGGMYLVEKPEDVVSLQAKVKDPS----NLHYVSQTTLSVDET 168
Query: 193 EEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNS 252
++ + + + G + IC ATQ RQDA+ +++ E+VD+++VVG NS
Sbjct: 169 ADVIDELRRVFPKIQGPRK--------DDICYATQNRQDAV-RILAEQVDVMVVVGSKNS 219
Query: 253 SNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSG 312
SN++ L+E+AE G P Y ID + I PG + +L IG+T+G
Sbjct: 220 SNSTRLKELAEKLGTPGYLIDCPQDIDPGGFVDAQL------------------IGVTAG 261
Query: 313 ASTPDKAVEDVLKKVFEI 330
AS P++ V +L+++ E+
Sbjct: 262 ASAPEELVNQILERIKEL 279
>gi|335042506|ref|ZP_08535533.1| penicillin tolerance protein [Methylophaga aminisulfidivorans MP]
gi|333789120|gb|EGL55002.1| penicillin tolerance protein [Methylophaga aminisulfidivorans MP]
Length = 319
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 148/321 (46%), Gaps = 75/321 (23%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +E++HN V L + I VEE D V G+ ++ A G + +
Sbjct: 35 VYVRHEVVHNRFVVDGLRDKGA--IFVEE----VDEVPDGNTLIFSAHGVSKKVQSEGRK 88
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++++ D TCP V+KV V +++K + I+ G H E T G+Y
Sbjct: 89 RDLKVFDATCPLVTKVHMEVSRYEKQNMECILIGHAGHPEVEGTM---GQY--------- 136
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSK--GFDPDVDLVKVGIANQTTMLKGETEE 194
+S+ +L + + V+K +P ++ QTT+ +T
Sbjct: 137 --------------TSTEGGMYLVESPEDVAKLKVKNPQ----RLAFVTQTTLSVDDTSV 178
Query: 195 IGKLVEKTMMRKFGVENVNEHFI-----SFNTICDATQERQDAMYKMVEEKVDLILVVGG 249
+ ++ + EHF S + IC ATQ RQDA+ K+ E DL+LVVG
Sbjct: 179 V-------------IDALREHFPDIIGPSKDDICYATQNRQDAVKKLANE-CDLVLVVGS 224
Query: 250 WNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGI 309
NSSN++ L+E++E G P+Y ID+ ++I P WL + + IG+
Sbjct: 225 VNSSNSNRLRELSEKLGTPAYLIDNAEQIDP-----------------QWL-ENKNRIGL 266
Query: 310 TSGASTPDKAVEDVLKKVFEI 330
T+GAS P+ V V++K+ ++
Sbjct: 267 TAGASAPEILVNQVVEKLRDL 287
>gi|374622176|ref|ZP_09694703.1| hydroxymethylbutenyl pyrophosphate reductase [Ectothiorhodospira
sp. PHS-1]
gi|373941304|gb|EHQ51849.1| hydroxymethylbutenyl pyrophosphate reductase [Ectothiorhodospira
sp. PHS-1]
Length = 314
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 132/311 (42%), Gaps = 60/311 (19%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L E I VEE D V G V+ A G
Sbjct: 33 IYVRHEVVHNRYVVNELREKGA--IFVEE----LDQVPDGATVIFSAHGVPRTVRDEARR 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V +H ++ G H E T G+Y
Sbjct: 87 RGLRVFDATCPLVTKVHMQVARHAARGEEVVLIGHAGHPEVDGTL---GQY--------- 134
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
D GGE+ + + A K + + QTT+ +T+ I
Sbjct: 135 ----DRSQGGEIYLVENVEAASRLDVKHPETLAY-----------VTQTTLSMDDTQGI- 178
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
V+ R ++ + IC ATQ RQDA+ + E DLILVVG NSSN++
Sbjct: 179 --VDALRARFPHIQGQRR-----DDICYATQNRQDAIKALAAE-CDLILVVGSPNSSNSN 230
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L+EIAE G+ +Y ID + I P WL +G+ IG+++GAS P
Sbjct: 231 RLREIAEKLGVEAYLIDGAEDIQP-----------------QWL-EGRRRIGVSAGASAP 272
Query: 317 DKAVEDVLKKV 327
+ V+ VL +
Sbjct: 273 ELLVQQVLDHL 283
>gi|344341585|ref|ZP_08772503.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Thiocapsa
marina 5811]
gi|343798517|gb|EGV16473.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Thiocapsa
marina 5811]
Length = 314
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 136/316 (43%), Gaps = 71/316 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +E++HN V L+E + VEE D V G ++ A G A E
Sbjct: 33 VYVRHEVVHNRFVVDGLKERGA--VFVEE----VDEVPDGATLIFSAHGVAQEVRRAAEG 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+N+++ D TCP V+KV V +H K I+ G H E T
Sbjct: 87 RNLRVFDATCPLVTKVHLEVARHCKNGIEVILIGHAGHPEVEGTMG-------------- 132
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
+ + D GG ++ S + + K DP +V QTT+ +T I
Sbjct: 133 QCLSD---GGAMHLVESVADVAGLEIK-------DPS----RVAYVTQTTLSVDDTSGI- 177
Query: 197 KLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGGWN 251
++ + E F + IC ATQ RQDA+ + + DL+LVVG N
Sbjct: 178 ------------IDALRERFPEIQGPKKSDICYATQNRQDAVRDLAA-RCDLLLVVGSAN 224
Query: 252 SSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITS 311
SSN++ L+E+AE +G +Y ID + I + +WL +G+T+
Sbjct: 225 SSNSNRLRELAEKQGCTAYLIDGPEDI-----------------RRDWLSAAP-RVGLTA 266
Query: 312 GASTPDKAVEDVLKKV 327
GAS P+ VE V+ ++
Sbjct: 267 GASAPEVLVEQVIAQL 282
>gi|427429663|ref|ZP_18919650.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Caenispirillum
salinarum AK4]
gi|425879900|gb|EKV28601.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Caenispirillum
salinarum AK4]
Length = 321
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 138/323 (42%), Gaps = 80/323 (24%)
Query: 9 RKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAA- 67
RK P I++ +EI+HN V ++L V + + D V G V + A G A
Sbjct: 29 RKYGP--PIYVRHEIVHNKHVVEQLRAKGVVFV------EDLDDVPPGVVTIFSAHGVAR 80
Query: 68 -VEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGK 126
VE+M +K++ ++D TCP VSKV K+ I+ G H E T
Sbjct: 81 SVEDMAA--DKDLPVIDATCPLVSKVHIEGRKYAAQGREVILIGHAGHPEVEGTV----- 133
Query: 127 YIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTT 186
G++ G+ + V+ DPD K+ QTT
Sbjct: 134 -------------------GQIPGTVHVISTADDARSLQVA---DPD----KLAYVTQTT 167
Query: 187 MLKGETEEIGKLVEKTMMRKFGVENVNEHF-----ISFNTICDATQERQDAMYKMVEEKV 241
+ +T + V+ + E F + IC ATQ RQ A+ +++ E+
Sbjct: 168 LSLDDTRGV-------------VDALKERFPAIAGLDTKDICYATQNRQRAV-RVLAEQC 213
Query: 242 DLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLP 301
DL+LVVG NSSN++ L+EI E G+PSY I+ + + P WL
Sbjct: 214 DLLLVVGAANSSNSNRLREIGELMGVPSYLINDARELDPA-----------------WLA 256
Query: 302 KGQITIGITSGASTPDKAVEDVL 324
Q +G+T+GAS P+ VE ++
Sbjct: 257 DKQ-KVGVTAGASAPEVLVEGLI 278
>gi|254434693|ref|ZP_05048201.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nitrosococcus
oceani AFC27]
gi|207091026|gb|EDZ68297.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nitrosococcus
oceani AFC27]
Length = 363
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 143/323 (44%), Gaps = 66/323 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V + L+ V I E+ + G V + A G + + T
Sbjct: 76 IYVLHEIVHNQHVVEDLQRRGV--IFTED----LASIPAGSVTIFSAHGVSTAVVETAKK 129
Query: 77 KNVQIVDTTCPWVSKVWTSVEKH-KKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKE 135
++Q++D TCP V+KV +K+ ++GD II G H E T
Sbjct: 130 NDLQVIDATCPLVTKVHLQAKKYYRQGDELIII-GHAGHPEVEGTR-------------- 174
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
G + G+ ++ E AV DP+ + QTT+ +T ++
Sbjct: 175 ----------GRVKGTVYVLDSVAEVENLAVK---DPE----HIAYVTQTTLSIDDTRDV 217
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
++K + G + IC ATQ RQ+A+ +M +KVD++LVVG NSSN+
Sbjct: 218 VDALKKRFPKIHGP--------GLDDICYATQNRQNAVREM-SKKVDILLVVGARNSSNS 268
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L+E+ E GI ++ I K + +W Q +GIT+GAST
Sbjct: 269 NRLREVGEQNGITAHLIQDAKDL-----------------DSSWF-TSQSRVGITAGAST 310
Query: 316 PDKAVEDVLKKVFEIKREEALQL 338
P+ V+ VL ++ EE + L
Sbjct: 311 PEILVQGVLNELRSYGVEEVMDL 333
>gi|126436907|ref|YP_001072598.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
sp. JLS]
gi|166217173|sp|A3Q4N0.1|ISPH_MYCSJ RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|126236707|gb|ABO00108.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
sp. JLS]
Length = 333
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 139/318 (43%), Gaps = 73/318 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V L + + +Q D V +G +VV A G A V
Sbjct: 55 VYVRHEIVHNRYVVDTLAKAGAVFV------EQTDEVPEGAIVVFSAHGVAPTVHVEAAA 108
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+N++ +D TCP V+KV ++ + DY ++ G HEE V TA A ++ V + +A
Sbjct: 109 RNLKTIDATCPLVTKVHNEAKRFARDDYDILLVGHEGHEEVVGTAGEAPDHVQVVDNPDA 168
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
K + DPD KV +QTT+ ET E
Sbjct: 169 -------------------------VDKVTVR--DPD----KVIWLSQTTLSVDETMET- 196
Query: 197 KLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGGWN 251
V + E F + + IC ATQ RQ A+ M E +L++VVG N
Sbjct: 197 ------------VRRLREKFPTLQDPPSDDICYATQNRQVAVKAMAPE-CELVIVVGSKN 243
Query: 252 SSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITS 311
SSN+ L E+A +G G+ A+ + + E ++ WL G T+G+TS
Sbjct: 244 SSNSVRLVEVA---------------LGAGSDAAHLVDYAEDIDP-TWL-DGVTTVGVTS 286
Query: 312 GASTPDKAVEDVLKKVFE 329
GAS P+ V VL ++ E
Sbjct: 287 GASVPEVLVRGVLDRLAE 304
>gi|108801069|ref|YP_641266.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
sp. MCS]
gi|119870211|ref|YP_940163.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
sp. KMS]
gi|123069758|sp|Q1B4H4.1|ISPH_MYCSS RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|166217174|sp|A1UKL5.1|ISPH_MYCSK RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|108771488|gb|ABG10210.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
sp. MCS]
gi|119696300|gb|ABL93373.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
sp. KMS]
Length = 333
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 139/318 (43%), Gaps = 73/318 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V L + + +Q D V +G +VV A G A V
Sbjct: 55 VYVRHEIVHNRYVVDTLAKAGAVFV------EQTDEVPEGAIVVFSAHGVAPTVHVEAAA 108
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+N++ +D TCP V+KV ++ + DY ++ G HEE V TA A ++ V + +A
Sbjct: 109 RNLKTIDATCPLVTKVHNEAKRFARDDYDILLVGHEGHEEVVGTAGEAPDHVQVVDNPDA 168
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
K + DPD KV +QTT+ ET E
Sbjct: 169 -------------------------VDKVTVR--DPD----KVIWLSQTTLSVDETMET- 196
Query: 197 KLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGGWN 251
V + E F + + IC ATQ RQ A+ M E +L++VVG N
Sbjct: 197 ------------VRRLREKFPTLQDPPSDDICYATQNRQVAVKAMAPE-CELVIVVGSKN 243
Query: 252 SSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITS 311
SSN+ L E+A +G G+ A+ + + E ++ WL G T+G+TS
Sbjct: 244 SSNSVRLVEVA---------------LGAGSDAAHLVDYAEDIDP-TWL-NGVTTVGVTS 286
Query: 312 GASTPDKAVEDVLKKVFE 329
GAS P+ V VL ++ E
Sbjct: 287 GASVPEVLVRGVLDRLAE 304
>gi|358457873|ref|ZP_09168088.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Frankia sp.
CN3]
gi|357078891|gb|EHI88335.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Frankia sp.
CN3]
Length = 319
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 136/309 (44%), Gaps = 65/309 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +I+HN V K LE A I VEE ++ V G VV A G A
Sbjct: 34 VYVRKQIVHNAHVVKTLE--AKGAIFVEETEE----VPHGATVVFSAHGVAPTVHEEATE 87
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ ++ +D TCP V+KV + + DY ++ G HEE V T A I
Sbjct: 88 RKLRTIDATCPLVTKVHHEARRFAREDYDILLIGHEGHEEVVGTTGQAPDRI-------- 139
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
+++ G + + DP +V +QTT+ ET E
Sbjct: 140 -----HLVDGPEDAAGVAVR--------------DPK----RVAYLSQTTLSVDETMETV 176
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+ + G N + IC ATQ RQ A+ K + + VDLILVVG NSSN+
Sbjct: 177 DALRERFPHLTGPPNSD--------ICYATQNRQVAV-KEIAQAVDLILVVGSPNSSNSV 227
Query: 257 HLQEIAEDRGIP-SYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
L E+A D G P +Y +D+ +++ +E WL G T+G+TSGAS
Sbjct: 228 RLVEVALDAGAPAAYLVDNSEQV-----------------QEQWL-DGVETVGVTSGASV 269
Query: 316 PDKAVEDVL 324
P++ V +++
Sbjct: 270 PEELVTELM 278
>gi|319790656|ref|YP_004152289.1| hydroxymethylbutenyl pyrophosphate reductase [Thermovibrio
ammonificans HB-1]
gi|317115158|gb|ADU97648.1| hydroxymethylbutenyl pyrophosphate reductase [Thermovibrio
ammonificans HB-1]
Length = 295
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 140/323 (43%), Gaps = 71/323 (21%)
Query: 16 KIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLN 75
+ + E+IHN +RL ++ + I + D V KGD VV+ + G A + L
Sbjct: 31 RAYCLGELIHNRREIERLRKLGMDFI------EDMDAVKKGDTVVIRSHGVAPSVIEFLK 84
Query: 76 NKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKE 135
+ ++VD TCP+V V K ++ Y +I G H E + A + II ++E
Sbjct: 85 GRGARVVDATCPFVKDVHEKAMKLEREGYPVLILGNPKHPEVIGIAGHLKEPIIASTVEE 144
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTM-LKGETEE 194
E A+ K + ++G+ QTT+ L E
Sbjct: 145 VE---------------------------ALPK-------MPRLGVVCQTTLNLNFFKEA 170
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
I L K K +NTIC AT RQ K+ + VD++L++GG NSSN
Sbjct: 171 ISLLALKVKELKV-----------YNTICSATSIRQRETRKLAGQ-VDVMLIIGGKNSSN 218
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
T+ L +I++ SY ++S+ I P W +G ++GIT+GAS
Sbjct: 219 TTKLYQISKSVNPRSYHVESKDEIDPA-----------------WF-EGAKSVGITAGAS 260
Query: 315 TPDKAVEDVLKKVFEIKREEALQ 337
TP +++V++ V ++ + L
Sbjct: 261 TPAWVIDEVVQFVKDLGKGGVLS 283
>gi|334341469|ref|YP_004546449.1| hydroxymethylbutenyl pyrophosphate reductase [Desulfotomaculum
ruminis DSM 2154]
gi|334092823|gb|AEG61163.1| hydroxymethylbutenyl pyrophosphate reductase [Desulfotomaculum
ruminis DSM 2154]
Length = 671
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 143/330 (43%), Gaps = 75/330 (22%)
Query: 14 EEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVT 73
E I+ +IHNP V K L ++ I V N+G V++ + G + +
Sbjct: 30 EGPIYTLGPLIHNPQVVKDLANRGIKEITVLPQ-------NEGGTVIIRSHGVGPDILQE 82
Query: 74 LNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA-GKYIIVKN 132
K+V+I+D TCP+V++ + + I G H E + GK I+++
Sbjct: 83 AQEKDVRIMDATCPFVARAQRYAREMAEQGLPVYILGDPGHPEVQGILGWTKGKGIVIEG 142
Query: 133 MKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGET 192
+E V D+ +VG+ QTT
Sbjct: 143 AEEINPVEDH-----------------------------------RVGLVAQTTQPLANY 167
Query: 193 EEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNS 252
+ + + ++K + + NTIC AT ERQ A ++ + VD+++VVGG S
Sbjct: 168 QAVVEALQKQGL----------QVDARNTICHATGERQQAALELAK-TVDVMIVVGGKES 216
Query: 253 SNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSG 312
+NT L I ++ G P+Y ++S + + +E+W + T G+T+G
Sbjct: 217 ANTKKLARICQETGTPTYHVESAQEL-----------------QEDWFREAG-TCGLTAG 258
Query: 313 ASTPDKAVEDVLKKVFEIKR---EEALQLA 339
ASTPD +E+V +++ E+ + EEA+Q A
Sbjct: 259 ASTPDAIIEEVKRRMNEMDQMNGEEAMQDA 288
>gi|421749215|ref|ZP_16186689.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Cupriavidus
necator HPC(L)]
gi|409771949|gb|EKN54100.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Cupriavidus
necator HPC(L)]
Length = 311
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 135/317 (42%), Gaps = 70/317 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAA--VEEMVTL 74
+++ +EI+HN V L + + + ++ D V V + A G A VEE
Sbjct: 33 VYVRHEIVHNRHVVDTLRDKGARFV------EELDEVPADAVTIFSAHGVARSVEE--EA 84
Query: 75 NNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-ASFAGKYIIVKNM 133
+ + +D TCP V KV ++ I+ G H E V T G+ I+V+N
Sbjct: 85 RTRQLHAIDATCPLVIKVHNQGRQYAASGRIVILIGHAGHPEVVGTMGQIPGRVILVQN- 143
Query: 134 KEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETE 193
EAE +L+ ++ T A++ QTT+ +T
Sbjct: 144 -EAEV-------AQLDLAADTPLAYV-----------------------TQTTLSVDDTR 172
Query: 194 EIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSS 253
I +E+ G + IC ATQ RQ A+ ++ + VD++LV+G NSS
Sbjct: 173 GIIAALERRFHDLVGPDT--------RDICYATQNRQSAVRELATQ-VDVLLVIGAPNSS 223
Query: 254 NTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGA 313
N++ L+EI + G+PSY I + P W+ + +GIT+GA
Sbjct: 224 NSNRLREIGSESGVPSYLIADGSELDPA-----------------WVRDAAV-VGITAGA 265
Query: 314 STPDKAVEDVLKKVFEI 330
S P+ VEDVL + +
Sbjct: 266 SAPEAMVEDVLAALRRL 282
>gi|339327087|ref|YP_004686780.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Cupriavidus
necator N-1]
gi|338167244|gb|AEI78299.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase IspH
[Cupriavidus necator N-1]
Length = 321
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 134/319 (42%), Gaps = 74/319 (23%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V L + ++ D V G V+ A G + E
Sbjct: 42 IYVRHEIVHNAYVVADLRRKGAVFV------RELDEVPAGATVIFSAHGVSREVRADAAA 95
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ + + D TCP V+KV V K + ++ G H E T M +A
Sbjct: 96 RGLHVFDATCPLVTKVHVEVSKMRAEGCEIVMIGHRGHPEVEGT------------MGQA 143
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
GG L S A L+ DP ++ QTT+ ET EI
Sbjct: 144 S-------GGMLLVESVADVATLQVA--------DPS----QLAYVTQTTLSVDETREI- 183
Query: 197 KLVEKTMMRKFGVENVNEHFISFN-----TICDATQERQDAMYKMVEEKVDLILVVGGWN 251
V + F IC ATQ RQDA+ K + +V++++VVG N
Sbjct: 184 ------------VAALKARFAQIREPKKQDICYATQNRQDAV-KFMAPQVEVVIVVGSPN 230
Query: 252 SSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITS 311
SSN++ L+E+AE G+P+Y +D+ +++ P W+ G+ IG+T+
Sbjct: 231 SSNSNRLRELAERLGVPAYMVDAPEQVRP-----------------EWI-AGKRRIGLTA 272
Query: 312 GASTPDKAVEDVLKKVFEI 330
GAS P+ + ++ ++ E+
Sbjct: 273 GASAPEALAQSIVDRLREL 291
>gi|425789596|ref|YP_007017516.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Aklavik117]
gi|425627911|gb|AFX91379.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Aklavik117]
Length = 274
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 139/312 (44%), Gaps = 67/312 (21%)
Query: 19 ITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKN 78
I +IHN RLE+ N+ +EE K+ + K V++ G +++ L NK
Sbjct: 30 IFGSLIHNAKEINRLEKNF--NVKIEEDPKK---IPKNKSVIIRTHGIPKQDLEYLKNKG 84
Query: 79 VQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEY 138
V+I D TCP+V K VE K Y ++ G +H E S+A +V
Sbjct: 85 VKITDATCPYVIKPQQIVESMSKEGYQIVLFGDINHPEVKGVISYATNQALV-------- 136
Query: 139 VCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKL 198
+N +E L++ KV + +QTT ++ KL
Sbjct: 137 ---------VNSLEELQEKKLQR----------------KVALVSQTT------KQTPKL 165
Query: 199 VEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHL 258
++ + + VE E I FNTIC+AT Q A + +E VD+++VVGG SSNT L
Sbjct: 166 LQ---IASYLVERCTEVRI-FNTICNATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQL 220
Query: 259 QEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 318
IA+ SY ++ E + EL W KG+ GIT+GASTPD
Sbjct: 221 LSIAKQHCEDSYLVEDENEL-------------ELA----WF-KGKKLCGITAGASTPDW 262
Query: 319 AVEDVLKKVFEI 330
+E+V +K+ I
Sbjct: 263 IIENVKQKISAI 274
>gi|312795312|ref|YP_004028234.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
rhizoxinica HKI 454]
gi|312167087|emb|CBW74090.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)
[Burkholderia rhizoxinica HKI 454]
Length = 317
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 134/315 (42%), Gaps = 66/315 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V L + + D V G ++ A G +
Sbjct: 41 IYVRHEIVHNAYVVDDLRRKGAIFV------ESLDDVPDGATLIFSAHGVPKAVRTRAID 94
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V K + + ++ G H E T A M
Sbjct: 95 RGLRVFDATCPLVTKVHMEVAKLRAEGFEIVMVGHRGHPEVEGTMGQASA-----GMHLV 149
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTM-LKGETEEI 195
E D A K DPD ++ QTT+ + TE I
Sbjct: 150 ETAADV----------------------AALKLADPD----RLAYVTQTTLSIDDATEVI 183
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
G L K + E IC ATQ RQDA+ K + + D+++VVG NSSN+
Sbjct: 184 GAL-------KARFPAIREP--KKQDICYATQNRQDAV-KFMAPQCDVVIVVGSPNSSNS 233
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L+E+A+ RG+P+Y +D+ ++I P WL G+ +G+T+GAS
Sbjct: 234 NRLREVAQKRGVPAYMVDAPEQIDPA-----------------WL-DGKQRVGVTAGASA 275
Query: 316 PDKAVEDVLKKVFEI 330
P+ + V++++ ++
Sbjct: 276 PEALAQAVVERLRQL 290
>gi|119946874|ref|YP_944554.1| hydroxymethylbutenyl pyrophosphate reductase [Psychromonas
ingrahamii 37]
gi|166217480|sp|A1SZP0.1|ISPH_PSYIN RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|119865478|gb|ABM04955.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Psychromonas
ingrahamii 37]
Length = 314
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 141/311 (45%), Gaps = 61/311 (19%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L A + VEE D V + +V+ A G A
Sbjct: 33 IYVRHEVVHNQYVVDDLR--ARGAVFVEE----LDEVPENSIVIFSAHGVAQSVRAEAKR 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
++++I D TCP V+KV V + + I+ G H E V T G+Y
Sbjct: 87 RDLKIFDATCPLVTKVHMEVTRASRRGQECILIGHQGHPEVVGTM---GQY--------- 134
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
D GG S E KK K +P+ + ++QTT+ +T I
Sbjct: 135 ----DNPQGGIYLIESP------EDIKKLEVK--NPN----SLCFSSQTTLSVDDTANII 178
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
K + + + G + IC ATQ RQDA+ K + E+ DL+LVVG NSSN++
Sbjct: 179 KALREKFPKIDGPRK--------DDICYATQNRQDAV-KALAERSDLVLVVGSTNSSNSN 229
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
LQE A G+ +Y IDSEK I K WL ++ +G+T+GAS P
Sbjct: 230 RLQEKASCVGVNAYLIDSEKDI-----------------KTEWLENVKV-VGVTAGASAP 271
Query: 317 DKAVEDVLKKV 327
+ V++V+ ++
Sbjct: 272 EVLVKEVIARL 282
>gi|383818413|ref|ZP_09973704.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
phlei RIVM601174]
gi|383338886|gb|EID17240.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
phlei RIVM601174]
Length = 318
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 140/319 (43%), Gaps = 75/319 (23%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V + L + + + D V +G +VV A G A +
Sbjct: 40 VYVRHEIVHNRHVVETLAKAGAVFV------DETDEVPEGAIVVFSAHGVAPTVHQSARE 93
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+N+Q++D TCP V+KV ++ + DY ++ G HEE + TA A ++ +
Sbjct: 94 RNLQVIDATCPLVTKVHNEAKRFARDDYDILLIGHEGHEEVIGTAGEAPDHVQL------ 147
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
++G S + + DP+ KV +QTT+ ET E
Sbjct: 148 -----------VDGPDSVDKVTVR----------DPN----KVIWLSQTTLSVDETMET- 181
Query: 197 KLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGGWN 251
V + E F + + IC ATQ RQ A+ M E +L++VVG N
Sbjct: 182 ------------VRRLREKFPTLQDPPSDDICYATQNRQVAVKAMAPE-CELVIVVGSRN 228
Query: 252 SSNTSHLQEIAEDRGI-PSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGIT 310
SSN+ L E+A + G ++ +D I P WL +G T+G+T
Sbjct: 229 SSNSVRLVEVARNAGADAAHLVDYADDIDPA-----------------WL-EGVTTVGVT 270
Query: 311 SGASTPDKAVEDVLKKVFE 329
SGAS P+ V VL+++ E
Sbjct: 271 SGASVPEILVRGVLERLAE 289
>gi|350544830|ref|ZP_08914374.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Candidatus
Burkholderia kirkii UZHbot1]
gi|350527380|emb|CCD38219.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Candidatus
Burkholderia kirkii UZHbot1]
Length = 322
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 145/315 (46%), Gaps = 66/315 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V + L + I ++ V +G ++ A G +
Sbjct: 46 IYVRHEIVHNAYVVEDLRKKGAIFI------EELADVPEGATLIFSAHGVSKAVRGEAEA 99
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYI-IVKNMKE 135
+ +++ D TCP V+KV V K ++ + ++ G H E T +G+ + +V++++
Sbjct: 100 RGLRVFDATCPLVTKVHMEVAKMRQEGFDIVMIGHKGHPEVEGTMGQSGEGMHLVEDIEN 159
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
K A+ DP+ ++ QTT+ ++
Sbjct: 160 V-------------------------LKLALP---DPE----RIAYVTQTTL---SVDDA 184
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
+++ + G++ + IC ATQ RQDA+ K + + D+++VVG NSSN+
Sbjct: 185 SAIIDALKTKYPGIKEPKKQ-----DICYATQNRQDAV-KFLAPQCDVVIVVGSPNSSNS 238
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
S L+E+AE RGIPSY +DS +I P W+ +G+ IG+T+GAS
Sbjct: 239 SRLREVAEKRGIPSYMVDSPTQIDP-----------------KWV-EGKKRIGVTAGASA 280
Query: 316 PDKAVEDVLKKVFEI 330
P+ + V+ ++ E+
Sbjct: 281 PEVLAQAVIARLREL 295
>gi|384898699|ref|YP_005774078.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori F30]
gi|385225709|ref|YP_005785634.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori 83]
gi|317178642|dbj|BAJ56430.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori F30]
gi|332673855|gb|AEE70672.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori 83]
Length = 274
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 139/312 (44%), Gaps = 67/312 (21%)
Query: 19 ITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKN 78
I +IHN RLE+ N+ +EE K+ + K V++ G +++ L NK
Sbjct: 30 IFGSLIHNAKEINRLEKNF--NVKIEEDPKK---IPKNKSVIIRTHGIPKQDLEYLKNKG 84
Query: 79 VQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEY 138
V+I D TCP+V K VE K Y ++ G +H E S+A +V
Sbjct: 85 VKITDATCPYVIKPQQIVESMSKEGYQIVLFGDINHPEVKGVISYATNQALV-------- 136
Query: 139 VCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKL 198
+N +E L++ KV + +QTT ++ KL
Sbjct: 137 ---------VNSLEELQEKKLQR----------------KVALVSQTT------KQTPKL 165
Query: 199 VEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHL 258
++ + + VE E I FNTIC+AT Q A + +E VD+++VVGG SSNT L
Sbjct: 166 LQ---IASYLVERCTEVRI-FNTICNATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQL 220
Query: 259 QEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 318
IA+ SY ++ E + EL W KG+ GIT+GASTPD
Sbjct: 221 LSIAKQHCEDSYLVEDENEL-------------ELA----WF-KGKKLCGITAGASTPDW 262
Query: 319 AVEDVLKKVFEI 330
+E+V +K+ I
Sbjct: 263 IIENVKQKISTI 274
>gi|422306179|ref|ZP_16393364.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
CP1035(8)]
gi|408627243|gb|EKL00060.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
CP1035(8)]
Length = 316
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 144/318 (45%), Gaps = 67/318 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L++ + + ++ + V ++V+ A G +
Sbjct: 33 IYVRHEVVHNRFVVEGLKQRGARFV------EELNEVPDDNIVIFSAHGVSQAVRQEAKE 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++ + D TCP V+KV V + + ++ G H E T G+Y
Sbjct: 87 RSLTVFDATCPLVTKVHMEVARASRKHMEVVLIGHAGHPEVEGTM---GQY--------- 134
Query: 137 EYVCDYILGGELNGSSSTKEAFL-EKFKKAVS---KGFDPDVDLVKVGIANQTTMLKGET 192
+S T +L EK + VS K DP + +QTT+ ET
Sbjct: 135 --------------ASDTGGMYLVEKPEDVVSLQAKVKDPS----NLHYVSQTTLSVDET 176
Query: 193 EEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNS 252
++ + + + G + IC ATQ RQDA+ +++ E+VD+I+VVG NS
Sbjct: 177 ADVIDELRRVFPKIQGPRK--------DDICYATQNRQDAV-RILAEQVDVIVVVGSKNS 227
Query: 253 SNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSG 312
SN++ L+E+AE G P Y ID + I P W Q+ IG+T+G
Sbjct: 228 SNSTRLKELAEKLGTPGYLIDCPQDIDP-----------------EWFVDAQL-IGVTAG 269
Query: 313 ASTPDKAVEDVLKKVFEI 330
AS P++ V +L+++ E+
Sbjct: 270 ASAPEELVNQILERIKEL 287
>gi|386827199|ref|ZP_10114306.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Beggiatoa alba B18LD]
gi|386428083|gb|EIJ41911.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Beggiatoa alba B18LD]
Length = 322
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 140/325 (43%), Gaps = 67/325 (20%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
I +A +P +++ +EI+HN V L + + + D V G V + A
Sbjct: 22 IVEQALMVYPH-PVYVLHEIVHNRYVVDDLRQKGAVFV------ESLDDVPLGAVCIFSA 74
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-AS 122
G A + N+ ++I+D TCP V+KV +++ + Y II G H E T
Sbjct: 75 HGVARAVVNKAENRQLEIIDATCPLVTKVHQQAQRYAQQGYEIIIIGHAGHPEVEGTRGR 134
Query: 123 FAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIA 182
G I+ + EA+ + ++N D K+
Sbjct: 135 IDGIVHILSTVPEAQAL-------QVN-------------------------DPCKLAYV 162
Query: 183 NQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVD 242
QTT+ +T+++ + + G + + IC ATQ RQ+A+ ++ ++ VD
Sbjct: 163 TQTTLSVDDTKDVIAFLNQRFPNIQGPQ--------LSDICYATQNRQNAVRELAKQ-VD 213
Query: 243 LILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPK 302
L+LVVG NSSN++ L+E E GI SY I + P W +
Sbjct: 214 LLLVVGASNSSNSNRLREAGEQAGITSYLIQDANDLKP-----------------EWF-Q 255
Query: 303 GQITIGITSGASTPDKAVEDVLKKV 327
Q IG+T+GAS P+ ++ VLK++
Sbjct: 256 QQPKIGVTAGASAPEILIQGVLKRL 280
>gi|73538723|ref|YP_299090.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ralstonia
eutropha JMP134]
gi|72122060|gb|AAZ64246.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ralstonia
eutropha JMP134]
Length = 323
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 133/314 (42%), Gaps = 70/314 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V + L+ + + ++ D V G V + A G + +
Sbjct: 33 VFVRHEIVHNKHVVEGLKNKGARFV------EELDEVPAGAVTIFSAHGVSRAVVADAGQ 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKE 135
+ + +D TCP V KV ++ T I+ G H E T GK I+V+N E
Sbjct: 87 RQLHAIDATCPLVIKVHNQGRQYAASGRTVILIGHAGHPEVEGTMGQIPGKVILVQNEAE 146
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
E L+ + T A++ QTT+ +T I
Sbjct: 147 VE---------RLDLPADTPVAYV-----------------------TQTTLSVDDTRNI 174
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNT--ICDATQERQDAMYKMVEEKVDLILVVGGWNSS 253
+ R+F + + +T IC ATQ RQ A+ + + D+ILV+G NSS
Sbjct: 175 ----IAALARRF------SNMVGPDTRDICYATQNRQSAVRDLCK-VADVILVIGATNSS 223
Query: 254 NTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGA 313
N++ L+EI + G+PSY I + P W+ I +GIT+GA
Sbjct: 224 NSNRLREIGTESGVPSYLIADGSELDPA-----------------WVTGANI-VGITAGA 265
Query: 314 STPDKAVEDVLKKV 327
S P++ VEDV+ +
Sbjct: 266 SAPEEMVEDVINAL 279
>gi|346306185|ref|ZP_08848347.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Dorea
formicigenerans 4_6_53AFAA]
gi|345905906|gb|EGX75641.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Dorea
formicigenerans 4_6_53AFAA]
Length = 285
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 139/314 (44%), Gaps = 65/314 (20%)
Query: 15 EKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTL 74
EKI+ IIHN V K +E+ V+ I EE KQ K +V++ + G L
Sbjct: 32 EKIYTYGPIIHNEEVIKDMEKKGVEVILSEEELKQI----KSGIVIIRSHGVPKRICDLL 87
Query: 75 NNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA-GKYIIVKNM 133
+ V+ VD TCP+V K+ VE+ + Y +I G H E + +A G I++
Sbjct: 88 DENGVRYVDATCPFVKKIHRIVEEKSRDGYHIVIIGNREHPEVMGIEGWAQGPATIIQTE 147
Query: 134 KEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETE 193
+EA + F+ + KV + QTT
Sbjct: 148 EEA-------------------------------RAFELVPESEKVCVVAQTTF---NYN 173
Query: 194 EIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSS 253
+ LVE +++ + I NTIC+AT+ERQ+ Y + ++VD ++V+G SS
Sbjct: 174 KFKDLVEIISEKRYDI-------IVLNTICNATKERQEEAYD-IAKRVDAMIVIGDKRSS 225
Query: 254 NTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGA 313
NT L EI + +Y+I + +G N N L + T+GIT+GA
Sbjct: 226 NTQKLFEICSNACADTYYIQT---LGDLNM--------------NQLRSVE-TVGITAGA 267
Query: 314 STPDKAVEDVLKKV 327
STP+K +E+V V
Sbjct: 268 STPNKIIEEVQNNV 281
>gi|120553797|ref|YP_958148.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Marinobacter
aquaeolei VT8]
gi|166217172|sp|A1TYZ2.1|ISPH_MARAV RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|120323646|gb|ABM17961.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Marinobacter
aquaeolei VT8]
Length = 316
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 147/323 (45%), Gaps = 60/323 (18%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L I V+E V +V+ A G +
Sbjct: 33 IYVRHEVVHNKFVVDNLRNRGA--IFVDE----LGEVPDDKLVIFSAHGVSQAVQNEAAR 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V ++ + I+ G + H E T G+Y
Sbjct: 87 RGLKVFDATCPLVTKVHMEVMRYSRDGRECILIGHHGHPEVEGTM---GQY--------- 134
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
D+ GG++ EA ++K + DP ++ QTT+ ++
Sbjct: 135 ----DHSNGGDI--YLVEDEADVQKLEVK-----DPS----RLSFVTQTTL---SMDDTA 176
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
++++ + +E + + IC ATQ RQDA+ K + D++LVVG NSSN++
Sbjct: 177 RVIDALRAKFPQIEGPRK-----DDICYATQNRQDAV-KQLAGDCDIMLVVGSPNSSNSN 230
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L+E+AE G P+Y ID +I P WL G+ IG+T+GAS P
Sbjct: 231 RLRELAERMGTPAYLIDEAAQIDPA-----------------WL-YGKKAIGVTAGASAP 272
Query: 317 DKAVEDVLKKVFEIKREEALQLA 339
+ V DV+K++ + EE ++++
Sbjct: 273 EVLVADVIKRLKALGGEEPVEVS 295
>gi|365175179|ref|ZP_09362616.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synergistes sp.
3_1_syn1]
gi|363613518|gb|EHL65029.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Synergistes sp.
3_1_syn1]
Length = 277
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 134/314 (42%), Gaps = 72/314 (22%)
Query: 16 KIWITNEIIHNPTVNKRLEE--MAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVT 73
+++ IHNP RLE+ + V + P E V +G V + A G E
Sbjct: 31 RVFALGSPIHNPQEIARLEKRGLVVVDSPEE--------VPEGAVSFVRAHGVTPEIFEL 82
Query: 74 LNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNM 133
L ++ ++VD TCP+V + + Y II G SH E +
Sbjct: 83 LRERSAKMVDGTCPFVKTAQERAQTLSQDGYIVIILGDASHPEVKGIMGY---------- 132
Query: 134 KEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETE 193
+ GE+ +S E E + + + GI +QTT E
Sbjct: 133 ----------VSGEVRVLASAGEIPRELYGR-------------RCGILSQTTQ---RVE 166
Query: 194 EIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSS 253
LV G +V+ +NTIC AT RQ ++ ++ EE D I+V+GG NS+
Sbjct: 167 TFAALVG-------GFASVSPEIKVYNTICRATLARQQSVCRLAEE-ADGIIVLGGRNSA 218
Query: 254 NTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGA 313
NT L EIA G+P+ WI+ GEL + WL + + TIGI +G
Sbjct: 219 NTRKLAEIASGSGVPTLWIEHA---------------GEL--EGGWL-ENKDTIGIAAGG 260
Query: 314 STPDKAVEDVLKKV 327
STPD ++++++K+
Sbjct: 261 STPDWLIKELIQKL 274
>gi|424776413|ref|ZP_18203394.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Alcaligenes sp.
HPC1271]
gi|422888233|gb|EKU30622.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Alcaligenes sp.
HPC1271]
Length = 323
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 140/321 (43%), Gaps = 78/321 (24%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V + L I K+ D G +V+ A G + +
Sbjct: 42 IYVRHEIVHNRYVVEDLRNKGAIFI------KELDEAPSGAIVIFSAHGVSRQVRDDAEK 95
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA--GKYII----- 129
+ +++ D TCP V+KV V + + I+ G H E T A G Y++
Sbjct: 96 RGLKVFDATCPLVTKVHIEVSRMRAEGREIIMIGHVGHPEVEGTLGQADGGMYLVETPED 155
Query: 130 VKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLK 189
V N+K A DPD K+ QTT+
Sbjct: 156 VANLKVA----------------------------------DPD----KLAFVTQTTL-- 175
Query: 190 GETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGG 249
+ + +V + + +F N+ E S IC ATQ RQDA+ K++ + DL+LVVG
Sbjct: 176 --SVDDAAVVAQALRERF--PNIVEPKKS--DICYATQNRQDAV-KIMAPQCDLVLVVGS 228
Query: 250 WNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGI 309
NSSN++ L+E+AE +G +Y +D + I P WL G+ +G+
Sbjct: 229 TNSSNSNRLREVAERKGAEAYLLDKPEMIDPA-----------------WL-VGKKRVGV 270
Query: 310 TSGASTPDKAVEDVLKKVFEI 330
T+GAS P+ V V++++ E+
Sbjct: 271 TAGASAPEVLVNQVIQRLQEL 291
>gi|334336435|ref|YP_004541587.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Isoptericola
variabilis 225]
gi|334106803|gb|AEG43693.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Isoptericola
variabilis 225]
Length = 346
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 136/318 (42%), Gaps = 73/318 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ EI+HN V L E + + D V +G +V A G + +
Sbjct: 46 VYVRKEIVHNKHVVATLRERGAIFV------NETDEVPEGARLVFSAHGVSPAVRASAAE 99
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++ +D TCP V+KV + K DY ++ G HEE TA A ++ V N +
Sbjct: 100 RSLDTIDATCPLVTKVHKEAVRFAKDDYDILLIGHDGHEEVEGTAGEAPDHVQVVNSPD- 158
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
E K V DPD KV +QTT+ ET E
Sbjct: 159 -----------------------EVDKVTVR---DPD----KVVWISQTTLSVDETMET- 187
Query: 197 KLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGGWN 251
V + E F S + IC ATQ RQ A+ K+ E DL++VVG N
Sbjct: 188 ------------VRRLRERFPSLQDPPSDDICYATQNRQVAVKKLAPE-CDLVIVVGSAN 234
Query: 252 SSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITS 311
SSN+ L E+A + G + AY++ +E+E WL G T+G+TS
Sbjct: 235 SSNSVRLVEVA---------------LEAGARSAYRVDRATEIEEE-WL-DGVTTVGVTS 277
Query: 312 GASTPDKAVEDVLKKVFE 329
GAS P+ V+DV++ + E
Sbjct: 278 GASVPEILVQDVIRHLAE 295
>gi|313143831|ref|ZP_07806024.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
cinaedi CCUG 18818]
gi|402783610|ref|YP_006638941.1| 4-hydroxy-3-methylbut-2-enyl diphosphatereductase [Helicobacter
cinaedi PAGU611]
gi|313128862|gb|EFR46479.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
cinaedi CCUG 18818]
gi|386780194|dbj|BAM15052.1| 4-hydroxy-3-methylbut-2-enyl diphosphatereductase [Helicobacter
cinaedi PAGU611]
gi|396078549|dbj|BAM31925.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
cinaedi ATCC BAA-847]
Length = 273
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 141/311 (45%), Gaps = 74/311 (23%)
Query: 23 IIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIV 82
+IHN +RL++ N+ + E Q + +++ G ++ TL N+ + IV
Sbjct: 34 LIHNAKEIERLQKDF--NVSLSETLNQ---AQQFQSIIVRTHGITKGDLETLKNQQIHIV 88
Query: 83 DTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDY 142
D TCP+V+K VEK Y +I G +H E + AS+ II +++E E V
Sbjct: 89 DATCPFVTKPQNIVEKMSNEGYQIVIFGDSNHPEVMGVASYGEDVIIAGSVEELENV--- 145
Query: 143 ILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTT---MLKGETEEIGKLV 199
KFKK KV + +QTT L GE
Sbjct: 146 ------------------KFKK-------------KVALVSQTTKQPKLFGE-------- 166
Query: 200 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQ 259
+ F VNE + FNTIC+AT + Q A+ ++ E VD++++VGG NSSNT L
Sbjct: 167 ----ITAFLATKVNECRV-FNTICNATFDNQSAVDELSRE-VDVMIIVGGKNSSNTKQLL 220
Query: 260 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 319
+IA+ SY ++ E + + W ++ G+++GASTPD
Sbjct: 221 KIAQKYCENSYLVEDENEL-----------------ERAWFENKKLC-GVSAGASTPDWI 262
Query: 320 VEDVLKKVFEI 330
+++V+ K+ +I
Sbjct: 263 IQNVVAKIEQI 273
>gi|256545242|ref|ZP_05472607.1| conserved hypothetical protein [Anaerococcus vaginalis ATCC 51170]
gi|256399069|gb|EEU12681.1| conserved hypothetical protein [Anaerococcus vaginalis ATCC 51170]
Length = 691
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 148/325 (45%), Gaps = 76/325 (23%)
Query: 16 KIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLN 75
K + ++HNPT KRLE+ V + E K K +V+ + G + L
Sbjct: 31 KTYTLGPLVHNPTQVKRLEKKGVSVVDENEILKI-----KNSQIVIRSHGVSENLKENLK 85
Query: 76 NKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKE 135
+ ++VD TCP + ++ + K + YT +I G H E A AS+ II+K+ E
Sbjct: 86 KNSNEVVDATCPVLLNIYKKIIKKEHEGYTIVIIGDKEHPEIKAMASYVNNGIIIKDETE 145
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
A+ + + + K+ + +QTT E I
Sbjct: 146 AKNITN----------------------------------MSKLYVVSQTTNRIDFFENI 171
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
+EKT N+ + NTIC+AT+ RQ+A K + ++VD ++VVGG+NSSNT
Sbjct: 172 AHELEKT----------NDDVVIENTICNATRLRQEAC-KSLSKEVDCMIVVGGFNSSNT 220
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQIT----IGITS 311
+ L +IA+ + ++ +RI E LP +++ IG+ +
Sbjct: 221 NKLYQIAQ------KYCENVQRI----------------ETVKDLPLQKLSNFNIIGVIA 258
Query: 312 GASTPDKAVEDVLKKVFEIKREEAL 336
GASTPD+ +E+V+ ++ ++ EE +
Sbjct: 259 GASTPDQVIEEVVNRMDDLTNEELM 283
>gi|168207492|ref|ZP_02633497.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
perfringens E str. JGS1987]
gi|169342619|ref|ZP_02863664.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
perfringens C str. JGS1495]
gi|169299261|gb|EDS81330.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
perfringens C str. JGS1495]
gi|170661181|gb|EDT13864.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
perfringens E str. JGS1987]
Length = 282
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 147/326 (45%), Gaps = 67/326 (20%)
Query: 5 AYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAF 64
A + +K+F + KI+ +IHN V LE + I + + D + KGDVV++ +
Sbjct: 24 AIKYQKEFGK-KIYTLGPLIHNNDVVNYLENNDIFAIELSDA----DSLKKGDVVLIRSH 78
Query: 65 GAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA 124
G + L +K + + + TCP+V+ + V+K + Y II G +H E + +
Sbjct: 79 GVKESVIKDLTDKGLIVKNATCPYVTNIQLKVKKCYEQGYKIIIVGDENHPEVIGINGWC 138
Query: 125 GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQ 184
I+ N K LE KV + +Q
Sbjct: 139 NDSAIITNGKTE----------------------LENIP-------------AKVCVVSQ 163
Query: 185 TTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLI 244
TT E +E V ++R ++ ++FNTIC AT RQ ++ ++ +E DL+
Sbjct: 164 TT----EKKETWNKVLNEIVR------ASKEIVAFNTICSATDVRQKSVQELSKE-ADLV 212
Query: 245 LVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQ 304
V+GG NSSNT+ L EI + SY I++ K + L+ E V+
Sbjct: 213 FVIGGKNSSNTTKLYEICKKECPKSYHIENVKELDES------LLEDESVK--------- 257
Query: 305 ITIGITSGASTPDKAVEDVLKKVFEI 330
TIGIT+GASTPD + +V+ K+ E+
Sbjct: 258 -TIGITAGASTPDWIINEVISKIKEL 282
>gi|383317790|ref|YP_005378632.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Frateuria aurantia DSM 6220]
gi|379044894|gb|AFC86950.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Frateuria aurantia DSM 6220]
Length = 331
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 143/321 (44%), Gaps = 80/321 (24%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V +L A + VEE + V V+ A G + N
Sbjct: 33 IYVRHEVVHNRYVVDKLR--AQGAVFVEE----IEEVPDDSTVIFSAHGVSKAVREEANQ 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-----ASFAGKYIIVK 131
+ +++ D TCP VSKV V + + T ++ G H E T A +AG+ ++V+
Sbjct: 87 RGLRVYDATCPLVSKVHMEVARLGRIGRTVLLIGHSGHPEVDGTLGQWNAKYAGEMLLVE 146
Query: 132 NMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGE 191
++ E V D LN T +++ QTT+ +
Sbjct: 147 SV---EGVAD------LNPKDPTSLSYV-----------------------TQTTLSVDD 174
Query: 192 TEEIGKLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILV 246
T+ I + + E F + IC ATQ RQDA+ ++ E V+++LV
Sbjct: 175 TKSI-------------INALRERFPEIEGPRKDDICYATQNRQDAVRELAAE-VEVMLV 220
Query: 247 VGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQIT 306
VG NSSN++ L+E+AE G+P+Y ID + I + W+ +
Sbjct: 221 VGSVNSSNSNRLRELAEKEGVPAYLIDGAEHI-----------------QHEWVANAK-R 262
Query: 307 IGITSGASTPDKAVEDVLKKV 327
+G+T+GAS P+K V DV+ ++
Sbjct: 263 VGVTAGASAPEKLVRDVIARL 283
>gi|404447454|ref|ZP_11012516.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
vaccae ATCC 25954]
gi|403648891|gb|EJZ04376.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
vaccae ATCC 25954]
Length = 337
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 138/319 (43%), Gaps = 75/319 (23%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V L + + +Q D V +G +VV A G A V
Sbjct: 59 VYVRHEIVHNRYVVDTLAKAGAVFV------EQTDEVPEGAIVVFSAHGVAPTVHVEAAA 112
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYI-IVKNMKE 135
+N++ +D TCP V+KV ++ + DY ++ G HEE V TA A ++ +V N
Sbjct: 113 RNLRTIDATCPLVTKVHNEAKRFARDDYDILLVGHEGHEEVVGTAGEAPDHVQVVDNPDA 172
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
+ V DPD KV +QTT+ ET E
Sbjct: 173 VDNVTVR----------------------------DPD----KVVWLSQTTLSVDETMET 200
Query: 196 GKLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGGW 250
V + E F + + IC ATQ RQ A+ M E DL++VVG
Sbjct: 201 -------------VRRLREKFPTLQDPPSDDICYATQNRQVAVKAMAPE-CDLVIVVGSK 246
Query: 251 NSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGIT 310
NSSN+ L E+A +G G++ A+ + + ++ WL G T+G+T
Sbjct: 247 NSSNSVRLVEVA---------------LGAGSEAAHLVDFADDIDPA-WL-DGVTTVGVT 289
Query: 311 SGASTPDKAVEDVLKKVFE 329
SGAS P+ V VL ++ E
Sbjct: 290 SGASVPEILVRGVLDRLAE 308
>gi|421745481|ref|ZP_16183331.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Cupriavidus
necator HPC(L)]
gi|409776022|gb|EKN57457.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Cupriavidus
necator HPC(L)]
Length = 319
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 134/317 (42%), Gaps = 76/317 (23%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V L + + D V G V+ A G +
Sbjct: 42 IYVRHEIVHNAYVVADLRRKGAIFV------QDLDEVPAGATVIFSAHGVSRSVRAEAQA 95
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA-GKYIIVKNMKE 135
+ + + D TCP V+KV V K + ++ G H E T A G ++V++ +
Sbjct: 96 RGLNVFDATCPLVTKVHVEVGKMRAEGCEIVMIGHRGHPEVEGTMGQADGGMLLVESPAD 155
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
+ L + T+ A++ QTT+ ETEEI
Sbjct: 156 VQT---------LQVADPTRLAYV-----------------------TQTTLSVDETEEI 183
Query: 196 GKLVEKTMMRKFGVENVNEHFISFN-----TICDATQERQDAMYKMVEEKVDLILVVGGW 250
V + F + IC ATQ RQDA+ K + +VD+++VVG
Sbjct: 184 -------------VAALKARFPAIREPKKQDICYATQNRQDAV-KFMAPQVDVVIVVGSP 229
Query: 251 NSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGIT 310
NSSN++ L+E+AE G+PSY +D+ +++ P W+ G+ IG+T
Sbjct: 230 NSSNSNRLRELAERLGVPSYMVDAPEQVRP-----------------EWI-AGKRRIGLT 271
Query: 311 SGASTPDKAVEDVLKKV 327
+GAS P+ + ++ ++
Sbjct: 272 AGASAPEALAQSIVDRL 288
>gi|337737064|ref|YP_004636511.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
acetobutylicum DSM 1731]
gi|384458572|ref|YP_005670992.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
acetobutylicum EA 2018]
gi|325509261|gb|ADZ20897.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding
domain protein [Clostridium acetobutylicum EA 2018]
gi|336292418|gb|AEI33552.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding
domain protein [Clostridium acetobutylicum DSM 1731]
Length = 642
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 144/314 (45%), Gaps = 65/314 (20%)
Query: 16 KIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLN 75
KI+ E+IHN V +L++ V I +E+ D + + DV+++ + G + E L
Sbjct: 33 KIYTLGELIHNNDVVDKLKDNNVYPIGIED----IDNLKENDVILIRSHGISEEIYKILL 88
Query: 76 NKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKE 135
+K + +++ TCP+V+K+ V+K+ + Y +I G H E + + I+ E
Sbjct: 89 SKGLTVINATCPFVTKIQEKVKKYNELGYDIVIVGDKYHPEVIGINGWCDNKAIISKQGE 148
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
N + T E+ KV I +QTT + E
Sbjct: 149 -------------NLENITSES--------------------KVCIVSQTTE---KLENW 172
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
K++++ R V ISFNTIC+AT ERQ + K + KVD ++V+GG SSNT
Sbjct: 173 EKVLKEVKNRAIEV-------ISFNTICNATSERQ-KIAKDLSNKVDFMVVIGGKQSSNT 224
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L EI + + +++ GE+ EN L IG+T+GAST
Sbjct: 225 TKLYEICKSNCNETIHVEN---------------SGEI--PENILKNKNCVIGVTAGAST 267
Query: 316 PDKAVEDVLKKVFE 329
PD +E+ + K+ E
Sbjct: 268 PDWIIEEAISKMSE 281
>gi|284105820|ref|ZP_06386224.1| LytB protein [Candidatus Poribacteria sp. WGA-A3]
gi|283830107|gb|EFC34373.1| LytB protein [Candidatus Poribacteria sp. WGA-A3]
Length = 319
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 142/309 (45%), Gaps = 66/309 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+H+ V L + + VEE D V G +V+ A G A +
Sbjct: 34 IYVRHEIVHSRHVVNSLRKRGA--VFVEE----LDEVPDGALVIFSAHGVAQQVWEEARR 87
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKE 135
+N++++D TCP V KV V + +Y I+ G H E V T K+ +V ++K+
Sbjct: 88 RNLKVIDATCPLVIKVHNEVNRDYNNNYELILIGHADHPEVVGTLGQVPDKFHLVSSVKD 147
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
E T E ++ V+ QTT+ +E
Sbjct: 148 VE----------------TLEVENQEHLSYVT----------------QTTL---SVDEC 172
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
++VE R G++ ++ IC ATQ RQ+A+ K + + V+LILV+G NSSN+
Sbjct: 173 SEIVEALNRRFPGIKGPHQ-----EDICYATQNRQNAV-KELAKFVELILVIGSPNSSNS 226
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L+E+AE +P+Y IDS + + K WL KG IG+T+GAS
Sbjct: 227 NRLRELAERFEVPAYLIDSYQDV-----------------KLEWL-KGVEAIGVTAGASA 268
Query: 316 PDKAVEDVL 324
P+ V +V+
Sbjct: 269 PEILVSEVV 277
>gi|291298291|ref|YP_003509569.1| hydroxymethylbutenyl pyrophosphate reductase [Stackebrandtia
nassauensis DSM 44728]
gi|290567511|gb|ADD40476.1| hydroxymethylbutenyl pyrophosphate reductase [Stackebrandtia
nassauensis DSM 44728]
Length = 478
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 127/311 (40%), Gaps = 65/311 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +I+HN V RLE + D V G VV A G A +
Sbjct: 38 IYVRKQIVHNTHVVARLEGEGAIFV------DDLDAVPDGACVVFSAHGVAPSVRAEAES 91
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ + ++D TCP V+KV T + + T ++ G HEE T A +V+++ +
Sbjct: 92 RGLDVIDATCPLVAKVHTEARRFAERGDTILLIGHSGHEEVEGTMGEAAGIRLVESLADV 151
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
+ S T E DP KV QTT+ ET EI
Sbjct: 152 D--------------SLTVE--------------DPS----KVAYLTQTTLSVDETAEII 179
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+ + + G + IC AT RQ+A+ ++ E DL+LVVG NSSN+
Sbjct: 180 AALRRRFPKLRGPGG--------DDICYATSNRQEAIVEVAREA-DLVLVVGSRNSSNSR 230
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L E+A G P++ I+ +I + WL G IG+++GAS P
Sbjct: 231 RLTEVAATAGTPAHLIEDAGQI-----------------RTEWL-TGARVIGLSAGASAP 272
Query: 317 DKAVEDVLKKV 327
VE V+ +
Sbjct: 273 PHLVEAVIAHL 283
>gi|386332674|ref|YP_006028843.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase protein
[Ralstonia solanacearum Po82]
gi|334195122|gb|AEG68307.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase protein
[Ralstonia solanacearum Po82]
Length = 325
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 139/311 (44%), Gaps = 64/311 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V L + ++ D V G V+ A G + +
Sbjct: 50 IYVRHEIVHNAYVVSDLRSKGAVFV------QELDDVPVGGTVIFSAHGVSRAVRLAAEA 103
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V K + + ++ G H E T M +A
Sbjct: 104 RGLRVFDATCPLVTKVHVEVSKMRAQGFEIVMIGHKGHPEVEGT------------MGQA 151
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
+ D +L E +E + V K D ++ QTT+ ET+EI
Sbjct: 152 D---DGMLLVE----------SVEDVARLVVK------DPARLAYVTQTTLSVDETQEI- 191
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
V R V H IC ATQ RQDA+ K + +V++++VVG NSSN++
Sbjct: 192 --VAAIKARFPAV-----HEPKKQDICYATQNRQDAV-KFMAPQVEVVIVVGSPNSSNSN 243
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L+E+AE G+P+Y +D+ +++ P WL G+ +G+T+GAS P
Sbjct: 244 RLRELAEKLGVPAYMVDTPEQVRP-----------------EWL-AGKRRVGLTAGASAP 285
Query: 317 DKAVEDVLKKV 327
++ + ++ ++
Sbjct: 286 EELAQSIVDRL 296
>gi|182626353|ref|ZP_02954108.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
perfringens D str. JGS1721]
gi|177908372|gb|EDT70917.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
perfringens D str. JGS1721]
Length = 282
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 148/326 (45%), Gaps = 67/326 (20%)
Query: 5 AYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAF 64
A + +K+F + KI+ +IHN V LE+ + I + + D + +GDVV++ +
Sbjct: 24 AIKYQKEFGK-KIYTLGPLIHNNDVVNYLEDNDIFAIELSDA----DSLKEGDVVLIRSH 78
Query: 65 GAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA 124
G + L +K + + + TCP+V+ + V+K + Y II G +H E + +
Sbjct: 79 GVKESVIKDLTDKGLIVKNATCPYVTNIQLKVKKCYEQGYKIIIVGDENHPEVIGINGWC 138
Query: 125 GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQ 184
I+ N K LE KV + +Q
Sbjct: 139 NDSAIITNGKTE----------------------LENIP-------------AKVCVVSQ 163
Query: 185 TTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLI 244
TT E +E V ++R ++ ++FNTIC AT RQ ++ ++ +E DL+
Sbjct: 164 TT----EKKETWNKVLNEIVR------ASKEIVAFNTICSATDVRQKSVQELSKE-ADLV 212
Query: 245 LVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQ 304
V+GG NSSNT+ L EI + SY I++ K + L+E EN
Sbjct: 213 FVIGGKNSSNTTKLYEICKKECPKSYHIENVKELDES-----------LLEDENVK---- 257
Query: 305 ITIGITSGASTPDKAVEDVLKKVFEI 330
TIGIT+GASTPD + +V+ K+ E+
Sbjct: 258 -TIGITAGASTPDWIINEVISKIKEL 282
>gi|145297757|ref|YP_001140598.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Aeromonas
salmonicida subsp. salmonicida A449]
gi|418358324|ref|ZP_12961001.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Aeromonas
salmonicida subsp. salmonicida 01-B526]
gi|166217143|sp|A4SIX8.1|ISPH_AERS4 RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|142850529|gb|ABO88850.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Aeromonas
salmonicida subsp. salmonicida A449]
gi|356688360|gb|EHI52920.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Aeromonas
salmonicida subsp. salmonicida 01-B526]
Length = 311
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 147/316 (46%), Gaps = 65/316 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAA--VEEMVTL 74
I++ +E++HN V +L+E + VEE D V +V+ A G A V EM
Sbjct: 33 IYVRHEVVHNRYVVNKLKEAGA--VFVEE----LDEVPDDSIVIFSAHGVAKTVREMA-- 84
Query: 75 NNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMK 134
++ +++ D TCP V+KV V + + +++ G H E + T G+Y +N +
Sbjct: 85 KSRALKVFDATCPLVTKVHMEVHRASRKGSEAVLIGHAGHPEVIGTM---GQY---ENRE 138
Query: 135 EAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEE 194
Y+ + + + K K +PD DL V QTT+ ET +
Sbjct: 139 GGMYLVE-----------TPDDVARLKVK-------NPD-DLCFV---TQTTLSVDETSD 176
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
+ + K + G + IC ATQ RQDA+ +M VD++LVVG NSSN
Sbjct: 177 VIDALRKQFPKIQGPRK--------DDICYATQNRQDAVREMAG-LVDVMLVVGSRNSSN 227
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
++ L+E+AE G +Y ID I + WL +G IG+T+GAS
Sbjct: 228 SNRLRELAEKVGSKAYLIDDASMI-----------------ETVWL-EGVKAIGVTAGAS 269
Query: 315 TPDKAVEDVLKKVFEI 330
PD V++V+ ++ E+
Sbjct: 270 APDVLVQNVIARLREL 285
>gi|15895122|ref|NP_348471.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
acetobutylicum ATCC 824]
gi|50401136|sp|Q97I09.1|ISPH_CLOAB RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|15024823|gb|AAK79811.1|AE007693_9 penicillin tolerance LytB domain/S1 ribosomal protein fusion
[Clostridium acetobutylicum ATCC 824]
Length = 642
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 144/314 (45%), Gaps = 65/314 (20%)
Query: 16 KIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLN 75
KI+ E+IHN V +L++ V I +E+ D + + DV+++ + G + E L
Sbjct: 33 KIYTLGELIHNNDVVDKLKDNNVYPIGIED----IDNLKENDVILIRSHGISEEIYKILL 88
Query: 76 NKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKE 135
+K + +++ TCP+V+K+ V+K+ + Y +I G H E + + I+ E
Sbjct: 89 SKGLTVINATCPFVTKIQEKVKKYNELGYDIVIVGDKYHPEVIGINGWCDNKAIISKQGE 148
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
N + T E+ KV I +QTT + E
Sbjct: 149 -------------NLENITSES--------------------KVCIVSQTTE---KLENW 172
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
K++++ R V ISFNTIC+AT ERQ + K + KVD ++V+GG SSNT
Sbjct: 173 EKVLKEVKNRAIEV-------ISFNTICNATSERQ-KIAKDLSNKVDFMVVIGGKQSSNT 224
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L EI + + +++ GE+ EN L IG+T+GAST
Sbjct: 225 TKLYEICKSNCNETIHVEN---------------SGEI--PENILKNKNCVIGVTAGAST 267
Query: 316 PDKAVEDVLKKVFE 329
PD +E+ + K+ E
Sbjct: 268 PDWIIEEAISKMSE 281
>gi|411010798|ref|ZP_11387127.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Aeromonas
aquariorum AAK1]
gi|423199624|ref|ZP_17186207.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Aeromonas
hydrophila SSU]
gi|404629185|gb|EKB25949.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Aeromonas
hydrophila SSU]
Length = 311
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 145/321 (45%), Gaps = 75/321 (23%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGA--AVEEMVTL 74
I++ +E++HN V +L+E + VEE D V +V+ A G AV EM
Sbjct: 33 IYVRHEVVHNRYVVNKLKEAGA--VFVEE----LDEVPDDSIVIFSAHGVSKAVREMA-- 84
Query: 75 NNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMK 134
++ +++ D TCP V+KV V + + +++ G H E + T G+Y +N +
Sbjct: 85 KSRALKVFDATCPLVTKVHMEVHRASRKGSEAVLIGHAGHPEVIGTM---GQY---ENRE 138
Query: 135 EAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEE 194
Y+ + A + + K +PD DL V QTT+ ET +
Sbjct: 139 GGMYLVE-------------TPADVARLKVK-----NPD-DLCFV---TQTTLSVDETSD 176
Query: 195 IGKLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGG 249
+ ++ + HF + IC ATQ RQDA+ +M VD +LVVG
Sbjct: 177 V-------------IDALRAHFPKIQGPRKDDICYATQNRQDAVREMAG-LVDAMLVVGS 222
Query: 250 WNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGI 309
NSSN++ L+E+AE G +Y ID I G WL G IG+
Sbjct: 223 RNSSNSNRLRELAEKVGAKAYLIDDASMIEAG-----------------WL-AGVKAIGV 264
Query: 310 TSGASTPDKAVEDVLKKVFEI 330
T+GAS P+ V+ V+ ++ E+
Sbjct: 265 TAGASAPEVLVQSVITRLREL 285
>gi|15840547|ref|NP_335584.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
tuberculosis CDC1551]
gi|13880725|gb|AAK45398.1| lytB protein [Mycobacterium tuberculosis CDC1551]
Length = 329
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 143/314 (45%), Gaps = 65/314 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V L + + VEE ++ V +G +VV A G A V+ +
Sbjct: 52 VYVRHEIVHNRHVVDTLAKAGA--VFVEETEQ----VPEGAIVVFSAHGVAPTVHVSASE 105
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+N+Q++D TCP V+KV + + DY ++ G HEE V TA A ++ +
Sbjct: 106 RNLQVIDATCPLVTKVHNEARRFARDDYDILLIGHEGHEEVVGTAGEAPDHVQL------ 159
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI- 195
++G + + + K V +QTT+ ET EI
Sbjct: 160 -----------VDGVDAVDQVTVRDEDKVV--------------WLSQTTLSVDETMEIV 194
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
G+L R+F + IC ATQ RQ A+ M E +L++VVG NSSN+
Sbjct: 195 GRL-----RRRFP----KLQDPPSDDICYATQNRQVAVKAMAPE-CELVIVVGSRNSSNS 244
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
L E+A +G G + A+ + + ++ WL G T+G+TSGAS
Sbjct: 245 VRLVEVA---------------LGAGARAAHLVDWADDIDSA-WL-DGVTTVGVTSGASV 287
Query: 316 PDKAVEDVLKKVFE 329
P+ V VL+++ E
Sbjct: 288 PEVLVRGVLERLAE 301
>gi|421484099|ref|ZP_15931671.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Achromobacter
piechaudii HLE]
gi|400197806|gb|EJO30770.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Achromobacter
piechaudii HLE]
Length = 325
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 138/316 (43%), Gaps = 68/316 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V + L I + D G +VV A G + +
Sbjct: 42 IYVRHEIVHNRYVVEDLRAKGAIFI------DELDDAPSGSIVVFSAHGVSKAVRAEAES 95
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA--GKYIIVKNMK 134
+ +Q+ D TCP V+KV V + + I+ G H E T A G Y++
Sbjct: 96 RGLQVFDATCPLVTKVHIEVARMRAAGREIIMIGHKGHPEVEGTLGQAQGGMYLV----- 150
Query: 135 EAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEE 194
E V D + G E+N DP+ + QTT+ + +
Sbjct: 151 --ETVED-VAGLEVN---------------------DPE----NLAYVTQTTL----SVD 178
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
V K + +F ++ E S IC ATQ RQDA+ K++ DL+LVVG NSSN
Sbjct: 179 DAAAVSKALKARF--PSIVEPKKS--DICYATQNRQDAV-KVMAPDCDLVLVVGSPNSSN 233
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
++ L+E+AE +G+ SY ID I P WL + IG+T+GAS
Sbjct: 234 SNRLREVAERKGVASYLIDGADSIDPA-----------------WLVDRK-RIGVTAGAS 275
Query: 315 TPDKAVEDVLKKVFEI 330
P+ V+ V+ +V E+
Sbjct: 276 APEILVQQVIDRVKEL 291
>gi|308231738|ref|ZP_07413603.2| lytB-related protein lytB2 [Mycobacterium tuberculosis SUMu001]
gi|308370061|ref|ZP_07420157.2| lytB-related protein lytB2 [Mycobacterium tuberculosis SUMu002]
gi|308370619|ref|ZP_07422144.2| lytB-related protein lytB2 [Mycobacterium tuberculosis SUMu003]
gi|308371868|ref|ZP_07426506.2| lytB-related protein lytB2 [Mycobacterium tuberculosis SUMu004]
gi|308373038|ref|ZP_07430815.2| lytB-related protein lytB2 [Mycobacterium tuberculosis SUMu005]
gi|308374215|ref|ZP_07435220.2| lytB-related protein lytB2 [Mycobacterium tuberculosis SUMu006]
gi|308375362|ref|ZP_07443646.2| lytB-related protein lytB2 [Mycobacterium tuberculosis SUMu007]
gi|308376624|ref|ZP_07439464.2| lytB-related protein lytB2 [Mycobacterium tuberculosis SUMu008]
gi|308377626|ref|ZP_07479841.2| lytB-related protein lytB2 [Mycobacterium tuberculosis SUMu009]
gi|308378837|ref|ZP_07484028.2| lytB-related protein lytB2 [Mycobacterium tuberculosis SUMu010]
gi|308379976|ref|ZP_07488265.2| lytB-related protein lytB2 [Mycobacterium tuberculosis SUMu011]
gi|308398684|ref|ZP_07492773.2| lytB-related protein lytB2 [Mycobacterium tuberculosis SUMu012]
gi|385990551|ref|YP_005908849.1| lytB-related protein lytB2 [Mycobacterium tuberculosis CCDC5180]
gi|385994150|ref|YP_005912448.1| lytB-related protein lytB2 [Mycobacterium tuberculosis CCDC5079]
gi|422812090|ref|ZP_16860478.1| lytB-like protein lytB2 [Mycobacterium tuberculosis CDC1551A]
gi|424946853|ref|ZP_18362549.1| 4-hydroxy-3-methylbut-2-enyl diphosphatereductase [Mycobacterium
tuberculosis NCGM2209]
gi|449063170|ref|YP_007430253.1| lytB-related protein lytB2 [Mycobacterium bovis BCG str. Korea
1168P]
gi|308216200|gb|EFO75599.1| lytB-related protein lytB2 [Mycobacterium tuberculosis SUMu001]
gi|308325459|gb|EFP14310.1| lytB-related protein lytB2 [Mycobacterium tuberculosis SUMu002]
gi|308331386|gb|EFP20237.1| lytB-related protein lytB2 [Mycobacterium tuberculosis SUMu003]
gi|308335198|gb|EFP24049.1| lytB-related protein lytB2 [Mycobacterium tuberculosis SUMu004]
gi|308339004|gb|EFP27855.1| lytB-related protein lytB2 [Mycobacterium tuberculosis SUMu005]
gi|308342674|gb|EFP31525.1| lytB-related protein lytB2 [Mycobacterium tuberculosis SUMu006]
gi|308346560|gb|EFP35411.1| lytB-related protein lytB2 [Mycobacterium tuberculosis SUMu007]
gi|308350480|gb|EFP39331.1| lytB-related protein lytB2 [Mycobacterium tuberculosis SUMu008]
gi|308355131|gb|EFP43982.1| lytB-related protein lytB2 [Mycobacterium tuberculosis SUMu009]
gi|308359084|gb|EFP47935.1| lytB-related protein lytB2 [Mycobacterium tuberculosis SUMu010]
gi|308363006|gb|EFP51857.1| lytB-related protein lytB2 [Mycobacterium tuberculosis SUMu011]
gi|308366654|gb|EFP55505.1| lytB-related protein lytB2 [Mycobacterium tuberculosis SUMu012]
gi|323720391|gb|EGB29485.1| lytB-like protein lytB2 [Mycobacterium tuberculosis CDC1551A]
gi|339294104|gb|AEJ46215.1| lytB-related protein lytB2 [Mycobacterium tuberculosis CCDC5079]
gi|339297744|gb|AEJ49854.1| lytB-related protein lytB2 [Mycobacterium tuberculosis CCDC5180]
gi|358231368|dbj|GAA44860.1| 4-hydroxy-3-methylbut-2-enyl diphosphatereductase [Mycobacterium
tuberculosis NCGM2209]
gi|379027313|dbj|BAL65046.1| 4-hydroxy-3-methylbut-2-enyl diphosphatereductase [Mycobacterium
tuberculosis str. Erdman = ATCC 35801]
gi|449031678|gb|AGE67105.1| lytB-related protein lytB2 [Mycobacterium bovis BCG str. Korea
1168P]
Length = 344
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 143/314 (45%), Gaps = 65/314 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V L + + VEE ++ V +G +VV A G A V+ +
Sbjct: 67 VYVRHEIVHNRHVVDTLAKAGA--VFVEETEQ----VPEGAIVVFSAHGVAPTVHVSASE 120
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+N+Q++D TCP V+KV + + DY ++ G HEE V TA A ++ +
Sbjct: 121 RNLQVIDATCPLVTKVHNEARRFARDDYDILLIGHEGHEEVVGTAGEAPDHVQL------ 174
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI- 195
++G + + + K V +QTT+ ET EI
Sbjct: 175 -----------VDGVDAVDQVTVRDEDKVV--------------WLSQTTLSVDETMEIV 209
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
G+L R+F + IC ATQ RQ A+ M E +L++VVG NSSN+
Sbjct: 210 GRL-----RRRFP----KLQDPPSDDICYATQNRQVAVKAMAPE-CELVIVVGSRNSSNS 259
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
L E+A +G G + A+ + + ++ WL G T+G+TSGAS
Sbjct: 260 VRLVEVA---------------LGAGARAAHLVDWADDIDSA-WL-DGVTTVGVTSGASV 302
Query: 316 PDKAVEDVLKKVFE 329
P+ V VL+++ E
Sbjct: 303 PEVLVRGVLERLAE 316
>gi|386747551|ref|YP_006220759.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
cetorum MIT 99-5656]
gi|384553793|gb|AFI05549.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
cetorum MIT 99-5656]
Length = 274
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 138/313 (44%), Gaps = 67/313 (21%)
Query: 15 EKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTL 74
E I +IHN RLE+ N+ +EE K+ ++K V++ G +++ L
Sbjct: 26 ENSLIFGSLIHNAKEINRLEKNF--NVKIEEDPKK---ISKDKSVIIRTHGIPKQDLEYL 80
Query: 75 NNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMK 134
NK ++I D TCP+V K VE K Y ++ G +H E S+A +V
Sbjct: 81 KNKGIKITDATCPYVIKPQQIVESMSKEGYQIVLFGDINHPEVKGVISYATNQTLV---- 136
Query: 135 EAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEE 194
+N +E L++ KV + +QTT ++
Sbjct: 137 -------------INSLEELQEKKLQR----------------KVALVSQTT------KQ 161
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
KL++ + + +E E I FNTIC+AT Q A + +E VD+++VVGG SSN
Sbjct: 162 TPKLLQ---IASYLIERCPEVRI-FNTICNATSHNQKAALDLSKE-VDIMIVVGGKASSN 216
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
T L IA+ SY ++ E + K W K + GIT+GAS
Sbjct: 217 TKQLLNIAKQHCKDSYLVEDESEL-----------------KIEWF-KDKTLCGITAGAS 258
Query: 315 TPDKAVEDVLKKV 327
TPD +E+V +KV
Sbjct: 259 TPDWIIENVKQKV 271
>gi|342214801|ref|ZP_08707474.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Veillonella sp.
oral taxon 780 str. F0422]
gi|341590624|gb|EGS33861.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Veillonella sp.
oral taxon 780 str. F0422]
Length = 635
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 137/308 (44%), Gaps = 79/308 (25%)
Query: 23 IIHNPTVNKRLEEMAVQNI----PVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKN 78
IIHNP V RLE+ V I VEEG +++ + G E +
Sbjct: 39 IIHNPQVVGRLEDNGVYAINELSDVEEG-----------TIIIRSHGVGPEVYEEAETRG 87
Query: 79 VQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAG-KYIIVKNMKEAE 137
+ ++D TCP V K + T II G+ H E + +AG K IIV+ ++A
Sbjct: 88 LPVIDATCPHVQKAQRDAKSVVDEGLTLIILGEKKHPEVKSINLWAGNKGIIVETEEDAR 147
Query: 138 YVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGK 197
+ F+EK +G+ QTT + + + I K
Sbjct: 148 NI-----------------QFVEK-----------------IGVVVQTTFSQFKFQSIIK 173
Query: 198 LVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSH 257
++E + N+ I F TIC AT+ERQ++ + +E VDL++VVGG NS NT+
Sbjct: 174 ILE---------QKSNDQKI-FKTICQATEERQNSAVALAKE-VDLMIVVGGKNSGNTTR 222
Query: 258 LQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPD 317
L E+ D G +Y I++ I + WL K T+G+T+GASTPD
Sbjct: 223 LAEVCRDVGCTTYHIETATEI-----------------QMTWL-KDVTTVGVTAGASTPD 264
Query: 318 KAVEDVLK 325
+++V++
Sbjct: 265 WIIKEVIQ 272
>gi|145222667|ref|YP_001133345.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
gilvum PYR-GCK]
gi|189045812|sp|A4T986.1|ISPH_MYCGI RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|145215153|gb|ABP44557.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
gilvum PYR-GCK]
Length = 333
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 140/318 (44%), Gaps = 73/318 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V L + + +Q D V +G +VV A G A V
Sbjct: 55 IYVRHEIVHNRYVVDTLAKAGAIFV------EQTDEVPEGAIVVFSAHGVAPTVHVEAAA 108
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+N++ +D TCP V+KV ++ + DY ++ G HEE V TA A ++ V + +A
Sbjct: 109 RNLKTIDATCPLVTKVHNEAKRFARDDYDILLVGHEGHEEVVGTAGEAPDHVQVVDNPDA 168
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
D ++ + N KV +QTT+ ET E
Sbjct: 169 ---VDNVVVRDPN----------------------------KVIWLSQTTLSVDETMET- 196
Query: 197 KLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGGWN 251
V + E F + + IC ATQ RQ A+ M E +L++VVG N
Sbjct: 197 ------------VRRLREKFPTLQDPPSDDICYATQNRQVAVKAMAPE-CELVIVVGSKN 243
Query: 252 SSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITS 311
SSN+ L E+A +G G++ A+ + + E ++ WL G T+G+TS
Sbjct: 244 SSNSVRLVEVA---------------LGAGSRAAHLVDYAEDIDPA-WL-DGVTTVGVTS 286
Query: 312 GASTPDKAVEDVLKKVFE 329
GAS P+ V VL ++ E
Sbjct: 287 GASVPEILVRGVLDRLAE 304
>gi|31792303|ref|NP_854796.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
bovis AF2122/97]
gi|57116829|ref|YP_177788.1| Probable LYTB-related protein LytB2 [Mycobacterium tuberculosis
H37Rv]
gi|121637041|ref|YP_977264.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
bovis BCG str. Pasteur 1173P2]
gi|148660896|ref|YP_001282419.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
tuberculosis H37Ra]
gi|148822323|ref|YP_001287077.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
tuberculosis F11]
gi|167969245|ref|ZP_02551522.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
tuberculosis H37Ra]
gi|224989514|ref|YP_002644201.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
bovis BCG str. Tokyo 172]
gi|253799850|ref|YP_003032851.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
tuberculosis KZN 1435]
gi|254231388|ref|ZP_04924715.1| lytB-related protein lytB2 [Mycobacterium tuberculosis C]
gi|254364017|ref|ZP_04980063.1| lytB-related protein lytB2 [Mycobacterium tuberculosis str.
Haarlem]
gi|254550108|ref|ZP_05140555.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
tuberculosis '98-R604 INH-RIF-EM']
gi|289442540|ref|ZP_06432284.1| LytB protein [Mycobacterium tuberculosis T46]
gi|289446700|ref|ZP_06436444.1| lytB-related protein lytB2 [Mycobacterium tuberculosis CPHL_A]
gi|289569103|ref|ZP_06449330.1| lytB-related protein lytB2 [Mycobacterium tuberculosis T17]
gi|289573763|ref|ZP_06453990.1| lytB family protein lytB2 [Mycobacterium tuberculosis K85]
gi|289744853|ref|ZP_06504231.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
tuberculosis 02_1987]
gi|289749646|ref|ZP_06509024.1| lytB-related protein lytB2 [Mycobacterium tuberculosis T92]
gi|289753176|ref|ZP_06512554.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1 [Mycobacterium
tuberculosis EAS054]
gi|289757199|ref|ZP_06516577.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|294993292|ref|ZP_06798983.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
tuberculosis 210]
gi|297633650|ref|ZP_06951430.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
tuberculosis KZN 4207]
gi|297730637|ref|ZP_06959755.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
tuberculosis KZN R506]
gi|298524607|ref|ZP_07012016.1| lytB-related protein lytB2 [Mycobacterium tuberculosis 94_M4241A]
gi|313657967|ref|ZP_07814847.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
tuberculosis KZN V2475]
gi|339631175|ref|YP_004722817.1| LYTB-related protein LYTB2 [Mycobacterium africanum GM041182]
gi|340626124|ref|YP_004744576.1| putative LYTB-like protein LYTB2 [Mycobacterium canettii CIPT
140010059]
gi|375297090|ref|YP_005101357.1| lytB-related protein lytB2 [Mycobacterium tuberculosis KZN 4207]
gi|378770875|ref|YP_005170608.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
bovis BCG str. Mexico]
gi|383306997|ref|YP_005359808.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
tuberculosis RGTB327]
gi|385997893|ref|YP_005916191.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
tuberculosis CTRI-2]
gi|392385812|ref|YP_005307441.1| lytB2 [Mycobacterium tuberculosis UT205]
gi|392433297|ref|YP_006474341.1| lytB-related protein lytB2 [Mycobacterium tuberculosis KZN 605]
gi|397672944|ref|YP_006514479.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1 [Mycobacterium
tuberculosis H37Rv]
gi|424805387|ref|ZP_18230818.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
tuberculosis W-148]
gi|433626204|ref|YP_007259833.1| Putative LytB-related protein LytB2 [Mycobacterium canettii CIPT
140060008]
gi|433634167|ref|YP_007267794.1| Putative LytB-related protein LytB2 [Mycobacterium canettii CIPT
140070017]
gi|61226764|sp|P0A5I0.1|ISPH1_MYCTU RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1
gi|61226766|sp|P0A5I1.1|ISPH1_MYCBO RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1
gi|31617891|emb|CAD94001.1| PROBABLE LYTB-RELATED PROTEIN LYTB2 [Mycobacterium bovis AF2122/97]
gi|121492688|emb|CAL71157.1| Probable lytB-related protein lytB2 [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|124600447|gb|EAY59457.1| lytB-related protein lytB2 [Mycobacterium tuberculosis C]
gi|134149531|gb|EBA41576.1| lytB-related protein lytB2 [Mycobacterium tuberculosis str.
Haarlem]
gi|148505048|gb|ABQ72857.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
tuberculosis H37Ra]
gi|148720850|gb|ABR05475.1| lytB-related protein lytB2 [Mycobacterium tuberculosis F11]
gi|224772627|dbj|BAH25433.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
bovis BCG str. Tokyo 172]
gi|253321353|gb|ACT25956.1| lytB-related protein lytB2 [Mycobacterium tuberculosis KZN 1435]
gi|289415459|gb|EFD12699.1| LytB protein [Mycobacterium tuberculosis T46]
gi|289419658|gb|EFD16859.1| lytB-related protein lytB2 [Mycobacterium tuberculosis CPHL_A]
gi|289538194|gb|EFD42772.1| lytB family protein lytB2 [Mycobacterium tuberculosis K85]
gi|289542857|gb|EFD46505.1| lytB-related protein lytB2 [Mycobacterium tuberculosis T17]
gi|289685381|gb|EFD52869.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
tuberculosis 02_1987]
gi|289690233|gb|EFD57662.1| lytB-related protein lytB2 [Mycobacterium tuberculosis T92]
gi|289693763|gb|EFD61192.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1 [Mycobacterium
tuberculosis EAS054]
gi|289712763|gb|EFD76775.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|298494401|gb|EFI29695.1| lytB-related protein lytB2 [Mycobacterium tuberculosis 94_M4241A]
gi|326904663|gb|EGE51596.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
tuberculosis W-148]
gi|328459595|gb|AEB05018.1| lytB-related protein lytB2 [Mycobacterium tuberculosis KZN 4207]
gi|339330531|emb|CCC26197.1| putative LYTB-related protein LYTB2 [Mycobacterium africanum
GM041182]
gi|340004314|emb|CCC43456.1| putative LYTB-related protein LYTB2 [Mycobacterium canettii CIPT
140010059]
gi|341601057|emb|CCC63729.1| probable lytB-related protein lytB2 [Mycobacterium bovis BCG str.
Moreau RDJ]
gi|344218939|gb|AEM99569.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
tuberculosis CTRI-2]
gi|356593196|gb|AET18425.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
bovis BCG str. Mexico]
gi|378544363|emb|CCE36637.1| lytB2 [Mycobacterium tuberculosis UT205]
gi|380720950|gb|AFE16059.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
tuberculosis RGTB327]
gi|392054706|gb|AFM50264.1| lytB-related protein lytB2 [Mycobacterium tuberculosis KZN 605]
gi|395137849|gb|AFN49008.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1 [Mycobacterium
tuberculosis H37Rv]
gi|432153810|emb|CCK51035.1| Putative LytB-related protein LytB2 [Mycobacterium canettii CIPT
140060008]
gi|432165760|emb|CCK63240.1| Putative LytB-related protein LytB2 [Mycobacterium canettii CIPT
140070017]
gi|440580583|emb|CCG10986.1| putative LYTB-RELATED protein LYTB2 [Mycobacterium tuberculosis
7199-99]
gi|444894608|emb|CCP43863.1| Probable LYTB-related protein LytB2 [Mycobacterium tuberculosis
H37Rv]
Length = 335
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 143/314 (45%), Gaps = 65/314 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V L + + VEE ++ V +G +VV A G A V+ +
Sbjct: 58 VYVRHEIVHNRHVVDTLAKAGA--VFVEETEQ----VPEGAIVVFSAHGVAPTVHVSASE 111
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+N+Q++D TCP V+KV + + DY ++ G HEE V TA A ++ +
Sbjct: 112 RNLQVIDATCPLVTKVHNEARRFARDDYDILLIGHEGHEEVVGTAGEAPDHVQL------ 165
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI- 195
++G + + + K V +QTT+ ET EI
Sbjct: 166 -----------VDGVDAVDQVTVRDEDKVV--------------WLSQTTLSVDETMEIV 200
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
G+L R+F + IC ATQ RQ A+ M E +L++VVG NSSN+
Sbjct: 201 GRL-----RRRFP----KLQDPPSDDICYATQNRQVAVKAMAPE-CELVIVVGSRNSSNS 250
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
L E+A +G G + A+ + + ++ WL G T+G+TSGAS
Sbjct: 251 VRLVEVA---------------LGAGARAAHLVDWADDIDSA-WL-DGVTTVGVTSGASV 293
Query: 316 PDKAVEDVLKKVFE 329
P+ V VL+++ E
Sbjct: 294 PEVLVRGVLERLAE 307
>gi|433630213|ref|YP_007263841.1| Putative LytB-related protein LytB2 [Mycobacterium canettii CIPT
140070010]
gi|433641256|ref|YP_007287015.1| Putative LytB-related protein LytB2 [Mycobacterium canettii CIPT
140070008]
gi|432157804|emb|CCK55086.1| Putative LytB-related protein LytB2 [Mycobacterium canettii CIPT
140070008]
gi|432161806|emb|CCK59156.1| Putative LytB-related protein LytB2 [Mycobacterium canettii CIPT
140070010]
Length = 335
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 143/314 (45%), Gaps = 65/314 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V L + + VEE ++ V +G +VV A G A V+ +
Sbjct: 58 VYVRHEIVHNRHVVDTLAKAGA--VFVEETEQ----VPEGAIVVFSAHGVAPTVHVSASE 111
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+N+Q++D TCP V+KV + + DY ++ G HEE V TA A ++ +
Sbjct: 112 RNLQVIDATCPLVTKVHNEARRFARDDYDILLIGHEGHEEVVGTAGEAPDHVQL------ 165
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI- 195
++G + + + K V +QTT+ ET EI
Sbjct: 166 -----------VDGVDAVDQVTVRDEDKVV--------------WLSQTTLSVDETMEIV 200
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
G+L R+F + IC ATQ RQ A+ M E +L++VVG NSSN+
Sbjct: 201 GRL-----RRRFP----KLQDPPSDDICYATQNRQVAVKAMAPE-CELVIVVGSRNSSNS 250
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
L E+A +G G + A+ + + ++ WL G T+G+TSGAS
Sbjct: 251 VRLVEVA---------------LGAGARAAHLVDWADDIDPA-WL-DGVTTVGVTSGASV 293
Query: 316 PDKAVEDVLKKVFE 329
P+ V VL+++ E
Sbjct: 294 PEVLVRGVLERLAE 307
>gi|417823805|ref|ZP_12470397.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HE48]
gi|340048434|gb|EGR09356.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HE48]
Length = 316
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 144/318 (45%), Gaps = 67/318 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L++ + + ++ + V ++V+ A G + +
Sbjct: 33 IYVRHEVVHNRFVVEGLKQRGARFV------EELNEVPDDNIVIFSAHGVSQAVRQEAKD 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++ + D TCP V+KV V + + ++ G H E T G+Y
Sbjct: 87 RSLTVFDATCPLVTKVHMEVARASRKHMEVVLIGHAGHPEVEGTM---GQY--------- 134
Query: 137 EYVCDYILGGELNGSSSTKEAFL-EKFKKAVS---KGFDPDVDLVKVGIANQTTMLKGET 192
+S T +L EK + VS K DP + +QTT+ ET
Sbjct: 135 --------------ASDTGGMYLVEKPEDVVSLQAKVKDPS----NLHYVSQTTLSVDET 176
Query: 193 EEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNS 252
++ + + + G + IC ATQ RQDA+ +++ E+VD+++VVG NS
Sbjct: 177 ADVIDELRRVFPKIQGPRK--------DDICYATQNRQDAV-RILAEQVDVMVVVGSKNS 227
Query: 253 SNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSG 312
SN++ L+E+AE G P Y ID + I P W Q+ IG+T+G
Sbjct: 228 SNSTRLKELAEKLGTPGYLIDCPQDIDP-----------------EWFVDAQL-IGVTAG 269
Query: 313 ASTPDKAVEDVLKKVFEI 330
AS P++ V +L ++ E+
Sbjct: 270 ASAPEELVNQILDRIKEL 287
>gi|262191826|ref|ZP_06049997.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
CT 5369-93]
gi|262032313|gb|EEY50880.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
CT 5369-93]
Length = 316
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 144/318 (45%), Gaps = 67/318 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L++ + + ++ + V ++V+ A G +
Sbjct: 33 IYVRHEVVHNRFVVEGLKQRGARFV------EELNEVPDDNIVIFSAHGVSQAVRQEAKE 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++ + D TCP V+KV V + + + ++ G H E T G+Y
Sbjct: 87 RSLTVFDATCPLVTKVHMEVARASRKNMEVVLIGHAGHPEVEGTM---GQY--------- 134
Query: 137 EYVCDYILGGELNGSSSTKEAFL-EKFKKAVS---KGFDPDVDLVKVGIANQTTMLKGET 192
+S T +L EK + VS K DP + +QTT+ ET
Sbjct: 135 --------------ASDTGGMYLVEKPEDVVSLQAKVKDPS----NLHYVSQTTLSVDET 176
Query: 193 EEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNS 252
++ + + + G + IC ATQ RQDA+ +++ E+VD+++VVG NS
Sbjct: 177 ADVIDELRRVFPKIQGPRK--------DDICYATQNRQDAV-RILAEQVDVMVVVGSKNS 227
Query: 253 SNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSG 312
SN++ L+E+AE G P Y ID + I P W Q+ IG+T+G
Sbjct: 228 SNSTRLKELAEKLGTPGYLIDCPQDIDP-----------------EWFVDAQL-IGVTAG 269
Query: 313 ASTPDKAVEDVLKKVFEI 330
AS P++ V +L ++ E+
Sbjct: 270 ASAPEELVNQILDRIKEL 287
>gi|87122998|ref|ZP_01078857.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, partial
[Marinomonas sp. MED121]
gi|86161715|gb|EAQ63021.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Marinomonas sp.
MED121]
Length = 318
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 149/319 (46%), Gaps = 70/319 (21%)
Query: 14 EEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVT 73
E I++ +E++HN V + L+ A + V+E + V ++V+ A G + +
Sbjct: 32 EAPIYVRHEVVHNKFVVESLK--ARGAVFVDE----LEQVPDDNLVIFSAHGVSKAVRLE 85
Query: 74 LNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNM 133
++ +++ D TCP V+KV V ++ + ++ G H E T G+Y
Sbjct: 86 AEHRGLKVFDATCPLVTKVHLEVVRYSRDGMECVLIGHDGHPEVEGTM---GQY------ 136
Query: 134 KEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETE 193
DY GG + S ++ K K +P+ K+ QTT+ +
Sbjct: 137 -------DYSKGGHIYLVESPEDVAKLKVK-------NPE----KLAFVTQTTLSMDDAS 178
Query: 194 EIGKLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVG 248
+ ++++ EHF + IC ATQ RQDA+ K+ EE L+LVVG
Sbjct: 179 VV-------------IDSLREHFPLIRGPKKDDICYATQNRQDAVKKLAEES-SLVLVVG 224
Query: 249 GWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIG 308
NSSN++ L+E++E G +Y ID+ ++I ++ WL KG +IG
Sbjct: 225 SVNSSNSNRLKELSERMGTTAYLIDN------ADEIQFE-----------WL-KGIDSIG 266
Query: 309 ITSGASTPDKAVEDVLKKV 327
IT+GAS P+ V++V+ ++
Sbjct: 267 ITAGASAPEVLVQEVIARL 285
>gi|336176874|ref|YP_004582249.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Frankia
symbiont of Datisca glomerata]
gi|334857854|gb|AEH08328.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Frankia
symbiont of Datisca glomerata]
Length = 322
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 140/310 (45%), Gaps = 67/310 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +I+HN V K LE A I VEE + V G VV A G A +
Sbjct: 34 VYVRKQIVHNAHVVKTLE--AKGAIFVEETYE----VPTGATVVFSAHGVAPTVHEEARS 87
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYI-IVKNMKE 135
+ ++ +D TCP V+KV + K D+ ++ G HEE + T A I +V ++
Sbjct: 88 RELRTIDATCPLVTKVHGEARRFAKEDFDILLIGHEGHEEVIGTTGQAPDRIHLVDGAED 147
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
AE V + + D KV +QTT+ ETE
Sbjct: 148 AEAV---------------------RVR-----------DESKVAYLSQTTLSVDETEVT 175
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
+ + + G + + IC ATQ RQ A+ K + +V+LILVVG NSSN+
Sbjct: 176 VRALRERFPLLQGPPSAD--------ICYATQNRQVAV-KEIASQVELILVVGSPNSSNS 226
Query: 256 SHLQEIAEDRGIP-SYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
L E+A D G+P ++ +D+ +++ P WL +G TIG+TSGAS
Sbjct: 227 VRLVEVALDHGVPAAHLVDNAEQVDPA-----------------WL-EGVETIGVTSGAS 268
Query: 315 TPDKAVEDVL 324
P++ V +V+
Sbjct: 269 VPEELVTEVV 278
>gi|256822878|ref|YP_003146841.1| hydroxymethylbutenyl pyrophosphate reductase [Kangiella koreensis
DSM 16069]
gi|256796417|gb|ACV27073.1| hydroxymethylbutenyl pyrophosphate reductase [Kangiella koreensis
DSM 16069]
Length = 311
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 139/314 (44%), Gaps = 71/314 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L E I + + V + ++ A G + +
Sbjct: 33 IYVKHEVVHNKFVVDGLREKGAVFI------EDLNDVPENATLIFSAHGVSQQVRHEAKE 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATA-----SFAGKYIIVK 131
+N+++ D TCP V+KV V +H + + ++ G H E T + AG Y++
Sbjct: 87 RNLKVFDATCPLVTKVHMEVSRHSRRNEECVLIGHKGHPEVEGTMGQYDNTGAGIYLVED 146
Query: 132 NMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGE 191
A+ E+N ++S + QTT+ +
Sbjct: 147 EQDVAQL--------EVNDANS-------------------------LFYVTQTTLSVDD 173
Query: 192 TEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWN 251
T+ +LV K + KF N + IC ATQ RQDA+ ++ E DLILVVG N
Sbjct: 174 TQ---RLV-KALQAKFP----NIQGPKKDDICYATQNRQDAVKQLAAE-CDLILVVGAQN 224
Query: 252 SSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITS 311
SSN+S LQE+AE++G SY I++ I +WL G +G+T+
Sbjct: 225 SSNSSRLQELAENQGCRSYLINNATEI-----------------DSSWL-NGVNKVGVTA 266
Query: 312 GASTPDKAVEDVLK 325
GAS P+ V+DV+K
Sbjct: 267 GASAPEILVQDVIK 280
>gi|385330256|ref|YP_005884207.1| hydroxymethylbutenyl pyrophosphate reductase [Marinobacter
adhaerens HP15]
gi|311693406|gb|ADP96279.1| hydroxymethylbutenyl pyrophosphate reductase [Marinobacter
adhaerens HP15]
Length = 317
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 138/319 (43%), Gaps = 70/319 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L + + D V +V+ A G +
Sbjct: 33 IYVRHEVVHNKFVVDNLRNRGAVFV------DELDEVPDDKLVIFSAHGVSQAVQNEAAR 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V ++ + ++ G + H E T G+Y
Sbjct: 87 RGLKVFDATCPLVTKVHLEVMRYSRDGRECVLIGHHGHPEVEGTM---GQY--------- 134
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI- 195
D+ GGE+ + ++ + K DP K+ QTT+ +T +
Sbjct: 135 ----DHSNGGEIYLVENEEDVANLEVK-------DPG----KLSYVTQTTLSMDDTARVI 179
Query: 196 ----GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWN 251
K E RK + IC ATQ RQDA+ K + DL+LVVG N
Sbjct: 180 DALRAKFPEIQGPRK-------------DDICYATQNRQDAV-KQLAGDCDLMLVVGSPN 225
Query: 252 SSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITS 311
SSN++ L+E+AE G P+Y ID +I P WL +G+ ++G+T+
Sbjct: 226 SSNSNRLRELAERMGTPAYLIDEASQIDPA-----------------WL-EGKTSVGVTA 267
Query: 312 GASTPDKAVEDVLKKVFEI 330
GAS P+ V +V+ ++ E+
Sbjct: 268 GASAPEVLVNEVITRLREL 286
>gi|423204057|ref|ZP_17190613.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Aeromonas
veronii AMC34]
gi|404628051|gb|EKB24839.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Aeromonas
veronii AMC34]
Length = 311
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 149/321 (46%), Gaps = 75/321 (23%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAA--VEEMVTL 74
I++ +E++HN V +L+E + VEE D V +V+ A G A V EM
Sbjct: 33 IYVRHEVVHNRYVVNKLKEAGA--VFVEE----LDEVPDDSIVIFSAHGVAKTVREMA-- 84
Query: 75 NNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMK 134
++ +++ D TCP V+KV V + + +++ G H E + T G+Y +N +
Sbjct: 85 KSRALKVFDATCPLVTKVHMEVHRASRKGSEAVLIGHAGHPEVIGTM---GQY---ENRE 138
Query: 135 EAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEE 194
Y+ + + ++ K K +PD DL V QTT+ ET +
Sbjct: 139 GGMYLVE-----------TPEDVARLKVK-------NPD-DLCFV---TQTTLSVDETSD 176
Query: 195 IGKLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGG 249
+ ++ + +HF + IC ATQ RQDA+ +M VD +LVVG
Sbjct: 177 V-------------IDALRKHFPKIQGPRKDDICYATQNRQDAVREMAG-LVDAMLVVGS 222
Query: 250 WNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGI 309
NSSN++ L+E+AE G +Y ID I + +WL +G IG+
Sbjct: 223 RNSSNSNRLRELAEKVGARAYLIDDASMI-----------------EASWL-EGVKAIGV 264
Query: 310 TSGASTPDKAVEDVLKKVFEI 330
T+GAS P+ V+ V+ ++ E+
Sbjct: 265 TAGASAPEVLVQSVIARLREL 285
>gi|352105818|ref|ZP_08960982.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Halomonas sp.
HAL1]
gi|350598241|gb|EHA14364.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Halomonas sp.
HAL1]
Length = 326
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 140/313 (44%), Gaps = 64/313 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L A + VEE D V +V+ A G +
Sbjct: 42 IYVRHEVVHNRFVVETLR--ARGAVFVEE----LDEVPDDVIVIFSAHGVSRAVQADAER 95
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V ++ K I+ G H E T G+Y
Sbjct: 96 RGLKVFDATCPLVTKVHLEVLRYAKRGQECILIGHEGHPEVEGTM---GRY--------- 143
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSK--GFDPDVDLVKVGIANQTTMLKGETEE 194
D GG + +L + +K V+K DP K+ QTT+ +T +
Sbjct: 144 ----DTSHGGRI---------YLVEDEKDVAKLEVRDPS----KIAFVTQTTLSMDDTAK 186
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
+ + G N + IC ATQ RQDA+ ++ + DL+LVVG NSSN
Sbjct: 187 VIDALRDKFSEIQGPRN--------DDICYATQNRQDAVRELAAQS-DLLLVVGSPNSSN 237
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
++ L+E++E G P+Y ID+ ++I P WL + IG+T+GAS
Sbjct: 238 SNRLRELSERMGTPAYLIDNAEQIDP-----------------QWLENVR-RIGVTAGAS 279
Query: 315 TPDKAVEDVLKKV 327
P+ V+ V+ K+
Sbjct: 280 APEVLVKGVIAKL 292
>gi|288920875|ref|ZP_06415171.1| hydroxymethylbutenyl pyrophosphate reductase [Frankia sp. EUN1f]
gi|288347707|gb|EFC81988.1| hydroxymethylbutenyl pyrophosphate reductase [Frankia sp. EUN1f]
Length = 319
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 134/309 (43%), Gaps = 65/309 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +I+HN V K LE A I VEE D V G VV A G A ++
Sbjct: 34 VYVRKQIVHNAHVVKTLE--AKGAIFVEE----TDEVPVGATVVFSAHGVAPTVHEEASS 87
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ ++ +D TCP V+KV + + K D ++ G HEE V T A I
Sbjct: 88 RQLRTIDATCPLVTKVHSEARRFAKEDLDILLIGHEGHEEVVGTTGQAPDRI-------- 139
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
+++ G + A K DP +V +QTT+ ET
Sbjct: 140 -----HLVDGPEDA--------------AAVKVRDPK----RVAFLSQTTLSVDETMTTV 176
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+ + G N + IC ATQ RQ A+ K + EKVDL++VVG NSSN+
Sbjct: 177 NALRERFPHLQGPPNSD--------ICYATQNRQVAV-KEIAEKVDLLIVVGSPNSSNSV 227
Query: 257 HLQEIAEDRGIP-SYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
L E+A D G P S+ +D + E+WL G T+G+TSGAS
Sbjct: 228 RLVEVALDAGAPKSFLVDDSTEV-----------------DESWL-DGVETVGVTSGASV 269
Query: 316 PDKAVEDVL 324
P++ V V+
Sbjct: 270 PEELVTGVM 278
>gi|170693584|ref|ZP_02884742.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia graminis
C4D1M]
gi|170141366|gb|EDT09536.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia graminis
C4D1M]
Length = 319
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 146/316 (46%), Gaps = 68/316 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V + L + I ++ + V G+ V+ A G + +
Sbjct: 43 IYVRHEIVHNAYVVEDLRKKGAIFI------ERLEEVPPGNTVIFSAHGVSKAVRSEAES 96
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYI-IVKNMKE 135
+ +++ D TCP V+KV V K ++ + ++ G H E T AG+ + +V+++++
Sbjct: 97 RGLRVYDATCPLVTKVHIEVAKMRQDGFDIVMIGHKGHPEVEGTMGQAGEGMHLVEDIED 156
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTM-LKGETEE 194
+ + + DP+ ++ QTT+ + E
Sbjct: 157 VQAL----------------------------QLADPE----RIAFVTQTTLSVDDAAEI 184
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
IG L K ++ E IC ATQ RQDA+ K + + D+++VVG NSSN
Sbjct: 185 IGAL-------KAKYPSIREP--KKQDICYATQNRQDAV-KFMAPQCDVVIVVGSPNSSN 234
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
++ L+E+AE G+P+Y +DS +I P W+ +G+ IG+T+GAS
Sbjct: 235 SNRLRELAEKLGVPAYMVDSPDQIDP-----------------TWV-EGKRRIGVTAGAS 276
Query: 315 TPDKAVEDVLKKVFEI 330
P+ + V+ ++ E+
Sbjct: 277 APEVLAQAVIARLREL 292
>gi|451336277|ref|ZP_21906835.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Amycolatopsis
azurea DSM 43854]
gi|449421061|gb|EMD26504.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Amycolatopsis
azurea DSM 43854]
Length = 422
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 136/318 (42%), Gaps = 78/318 (24%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +I+HN TV LE++ + + D V G VV A G A
Sbjct: 147 LYVRKQIVHNATVIADLEQLGAVFV------DELDEVPDGATVVFSAHGVAPAVWSEAAA 200
Query: 77 KNVQIVDTTCPWVSKVWTSVEKH-KKGDYTSIIHGKYSHEETVATASFA-GKYIIVKNMK 134
+ + ++D TCP V+KV + ++GD T ++ G HEE T A G+ ++V+N+
Sbjct: 201 RGLDVIDATCPLVAKVHAEARRFVRRGD-TVVLIGHGGHEEVDGTLGEAPGEILLVENVA 259
Query: 135 EAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEE 194
E G L+ T+ ++L QTT+ ET E
Sbjct: 260 EV---------GTLDVPDPTRVSYL-----------------------TQTTLAADETAE 287
Query: 195 IGKLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGG 249
+ V+ + + F + + IC A+ RQDA+ + + VDL+LVVG
Sbjct: 288 V-------------VDALRQRFPALAGPPSDDICYASTNRQDALRGLARD-VDLVLVVGS 333
Query: 250 WNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGI 309
NSSN+ L E+AE G P++ ID I EL WL +G+
Sbjct: 334 PNSSNSLRLVELAEAAGTPAHLIDDATDI-------------EL----GWLADAG-RVGL 375
Query: 310 TSGASTPDKAVEDVLKKV 327
T+GAS P V+ V+ +
Sbjct: 376 TAGASAPPHLVDGVVDAL 393
>gi|68165332|gb|AAY87626.1| LytB [Vibrio cholerae]
Length = 280
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 145/321 (45%), Gaps = 67/321 (20%)
Query: 14 EEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVT 73
+ I++ +E++HN V + L++ + + ++ + V ++V+ A G +
Sbjct: 22 QPPIYVRHEVVHNRFVVEGLKQRGARFV------EELNEVPDDNIVIFSAHGVSQAVRQE 75
Query: 74 LNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNM 133
++++ + D TCP V+KV V + + ++ G H E T G+Y
Sbjct: 76 AKDRSLTVFDATCPLVTKVHMEVARASRKHMEVVLIGHAGHPEVEGTM---GQY------ 126
Query: 134 KEAEYVCDYILGGELNGSSSTKEAFL-EKFKKAVS---KGFDPDVDLVKVGIANQTTMLK 189
+S T +L EK + VS K DP + +QTT+
Sbjct: 127 -----------------ASDTGGMYLVEKPEDVVSLQAKVKDPS----NLHYVSQTTLSV 165
Query: 190 GETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGG 249
ET ++ + + + G + IC ATQ RQDA+ +++ E+VD+++VVG
Sbjct: 166 DETADVIDELRRVFPKIQGPRK--------DDICYATQNRQDAV-RILAEQVDVMVVVGS 216
Query: 250 WNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGI 309
NSSN++ L+E+AE G P Y ID + I P W Q+ IG+
Sbjct: 217 KNSSNSTRLKELAEKLGTPGYLIDCPQDIDP-----------------EWFVDAQL-IGV 258
Query: 310 TSGASTPDKAVEDVLKKVFEI 330
T+GAS P++ V +L ++ E+
Sbjct: 259 TAGASAPEELVNQILDRIKEL 279
>gi|150017403|ref|YP_001309657.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
beijerinckii NCIMB 8052]
gi|149903868|gb|ABR34701.1| hydroxymethylbutenyl pyrophosphate reductase [Clostridium
beijerinckii NCIMB 8052]
Length = 635
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 141/309 (45%), Gaps = 66/309 (21%)
Query: 16 KIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLN 75
KI+ +IHN V K LEE + +I EE D +NKGD +V+ + G + + TL
Sbjct: 33 KIYTLGPLIHNNDVVKYLEENNIFSIEFEE----IDKLNKGDTIVIRSHGVSETVLDTLE 88
Query: 76 NKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKE 135
K +++++ TCP+V+ + V+K+ K Y +I G +H E + + I+
Sbjct: 89 QKELKVINATCPFVANIQKKVKKYSKEGYHIVILGDKNHPEVIGINGWCDDKAII----- 143
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
TK+ FD + KV + +QTT EE
Sbjct: 144 ------------------TKDG-----------TFDEENMPHKVCVVSQTTEKMKNWEET 174
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
K + ++FNTIC AT RQ + K + +K D ++V+GG NSSNT
Sbjct: 175 LKNLSYA-----------REILAFNTICAATDVRQRSTNK-ISKKTDAMIVIGGKNSSNT 222
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L +IA++ + I++ K + P + I K N + K IG+T+GAST
Sbjct: 223 TKLYQIAKENCENTIHIENAKDL-PISFI-----------KNNNINK----IGVTAGAST 266
Query: 316 PDKAVEDVL 324
PD + +VL
Sbjct: 267 PDWIIREVL 275
>gi|68165336|gb|AAY87628.1| LytB [Vibrio cholerae]
Length = 280
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 144/318 (45%), Gaps = 67/318 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L++ + + ++ + V ++V+ A G +
Sbjct: 25 IYVRHEVVHNRFVVEGLKQRGARFV------EELNEVPDDNIVIFSAHGVSQAVRQEAKE 78
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++ + D TCP V+KV V + + + ++ G H E T G+Y
Sbjct: 79 RSLTVFDATCPLVTKVHMEVARASRKNMEVVLIGHAGHPEVEGTM---GQY--------- 126
Query: 137 EYVCDYILGGELNGSSSTKEAFL-EKFKKAVS---KGFDPDVDLVKVGIANQTTMLKGET 192
+S T +L EK + VS K DP + +QTT+ ET
Sbjct: 127 --------------ASDTGGMYLVEKPEDVVSLQAKVKDPS----NLHYVSQTTLSVDET 168
Query: 193 EEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNS 252
++ + + + G + IC ATQ RQDA+ +++ E+VD+++VVG NS
Sbjct: 169 ADVIDELRRVFPKIQGPRK--------DDICYATQNRQDAV-RILAEQVDVMVVVGSKNS 219
Query: 253 SNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSG 312
SN++ L+E+AE G P Y ID + I P W Q+ IG+T+G
Sbjct: 220 SNSTRLKELAEKLGTPGYLIDCPQDIDP-----------------EWFVDAQL-IGVTAG 261
Query: 313 ASTPDKAVEDVLKKVFEI 330
AS P++ V +L ++ E+
Sbjct: 262 ASAPEELVNQILDRIKEL 279
>gi|186475354|ref|YP_001856824.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
phymatum STM815]
gi|184191813|gb|ACC69778.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia phymatum
STM815]
Length = 319
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 139/315 (44%), Gaps = 66/315 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V + L + I +Q + V G V+ A G + +
Sbjct: 43 IYVRHEIVHNAYVVEDLRKKGAIFI------EQLEEVPSGSTVIFSAHGVSKAVRAEADE 96
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V K + + ++ G H E T + E
Sbjct: 97 RGLRVYDATCPLVTKVHIEVAKMRADGFDIVMIGHKGHPEVEGT---------MGQTAEG 147
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTM-LKGETEEI 195
Y+ + +++ + + A DPD ++ QTT+ + + I
Sbjct: 148 MYLVE-----DIDDVQALQLA-------------DPD----RIAYVTQTTLSVDDAAQII 185
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
G L K N+ E IC ATQ RQDA+ K + + D+++VVG NSSN+
Sbjct: 186 GAL-------KVKYPNIKEP--KKQDICYATQNRQDAV-KFMAPQCDVVIVVGSPNSSNS 235
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L+E+AE G+PSY +DS +I P W+ + IG+T+GAS
Sbjct: 236 NRLRELAEKLGVPSYMVDSPDQIDPA-----------------WVADKR-RIGVTAGASA 277
Query: 316 PDKAVEDVLKKVFEI 330
P+ + V+ ++ E+
Sbjct: 278 PEALAQAVIGRLREL 292
>gi|348026190|ref|YP_004765995.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Megasphaera
elsdenii DSM 20460]
gi|341822244|emb|CCC73168.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Megasphaera
elsdenii DSM 20460]
Length = 652
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 132/306 (43%), Gaps = 74/306 (24%)
Query: 23 IIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIV 82
IIHNP V RL V PV+ D V+KG VV++ + G + K ++++
Sbjct: 35 IIHNPQVVGRLAAHGVS--PVD----SLDEVDKGAVVLIRSHGVGPDVYDQAVQKELKVI 88
Query: 83 DTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF-AGKYIIVKNMKEAEYV-- 139
D TCP V K + + II G+ SH E ++ + + A + II+ +EAE +
Sbjct: 89 DATCPHVKKAQQDAKNIVEKGENLIIVGEKSHPEVISISQWGANRAIIIDREEEAEKIPF 148
Query: 140 CDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLV 199
CD + G+ QTT ++E K +
Sbjct: 149 CDSM------------------------------------GVVVQTTF----SQEQFKRI 168
Query: 200 EKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQ 259
+ RK H TIC ATQ+RQ A ++ VD ++V+GG NS+NT L
Sbjct: 169 AAILQRK------TNHLDVHMTICTATQQRQQAAIELAGH-VDAMIVIGGKNSANTGRLA 221
Query: 260 EIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKA 319
++ ++ P+Y I++ + W +G IGIT+GASTPD
Sbjct: 222 QVCREQDCPTYHIETAAELDTA-----------------WF-RGMNHIGITAGASTPDWI 263
Query: 320 VEDVLK 325
+++V+K
Sbjct: 264 IQEVVK 269
>gi|322379466|ref|ZP_08053836.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
suis HS1]
gi|321148175|gb|EFX42705.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
suis HS1]
Length = 274
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 132/306 (43%), Gaps = 67/306 (21%)
Query: 23 IIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIV 82
+IHNP KRLE+ N+ V+E + V++ G ++ L K I+
Sbjct: 34 LIHNPKEIKRLEQNF--NVKVQEN---VSAIESNSHVIIRTHGIPKNDLTLLKEKGAHII 88
Query: 83 DTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDY 142
D TCP+V K VEK Y +I G +H E S+A +V N
Sbjct: 89 DATCPYVIKPQQIVEKMSAKGYQIVIFGDANHPEVKGVISYAHTPPLVIN---------- 138
Query: 143 ILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKT 202
S ++ + +K K +V + +QTT + EI +
Sbjct: 139 ----------SLEQLYTQKLSK-------------RVALVSQTTKQTPQLLEIASFL--- 172
Query: 203 MMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIA 262
++R V FNTIC+AT E Q+A+ ++ +E VD+++VVGG SSNT L IA
Sbjct: 173 IVRCAEVR-------IFNTICNATFENQEAVRELSQE-VDIMVVVGGKTSSNTKQLFNIA 224
Query: 263 EDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVED 322
++ SY ++ K + P W G+ GI++GASTPD +E
Sbjct: 225 KEFCTDSYLVEDFKDLDP-----------------TWF-MGKKLCGISAGASTPDWIIEG 266
Query: 323 VLKKVF 328
V +K+
Sbjct: 267 VREKIL 272
>gi|307730750|ref|YP_003907974.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia sp.
CCGE1003]
gi|307585285|gb|ADN58683.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia sp.
CCGE1003]
Length = 319
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 144/315 (45%), Gaps = 66/315 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V + L + I ++ + V G+ V+ A G + +
Sbjct: 43 IYVRHEIVHNAYVVEDLRKKGAIFI------ERLEEVPPGNTVIFSAHGVSKAVRSEAES 96
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYI-IVKNMKE 135
+ +++ D TCP V+KV V K ++ + ++ G H E T AG+ + +V+++++
Sbjct: 97 RGLRVYDATCPLVTKVHIEVAKMRQDGFDIVMIGHKGHPEVEGTMGQAGEGMHLVEDIED 156
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
+ + + DP+ ++ QTT+ + EI
Sbjct: 157 VQAL----------------------------QLADPE----RIAFVTQTTLSVDDAAEI 184
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
+R + + IC ATQ RQDA+ K + + D+++VVG NSSN+
Sbjct: 185 --------IRALKAKYPSIREPKKQDICYATQNRQDAV-KFMAPQCDVVIVVGSPNSSNS 235
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L+E+AE G+P+Y +DS +I P W+ +G+ IG+T+GAS
Sbjct: 236 NRLRELAEKLGVPAYMVDSPDQIDP-----------------VWV-EGKRRIGVTAGASA 277
Query: 316 PDKAVEDVLKKVFEI 330
P+ + V+ ++ E+
Sbjct: 278 PEVLAQAVIARLREL 292
>gi|389807197|ref|ZP_10203991.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Rhodanobacter
thiooxydans LCS2]
gi|388444448|gb|EIM00552.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Rhodanobacter
thiooxydans LCS2]
Length = 320
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 143/316 (45%), Gaps = 70/316 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V +L A + VEE V G V+ A G +
Sbjct: 33 IYVRHEVVHNRYVVDKLR--ADGAVFVEE----LHEVPDGATVIFSAHGVSQAVREEAEQ 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATA-----SFAGKYIIVK 131
+++++ D TCP V+KV V + + + ++ G H E T + AG+ ++V+
Sbjct: 87 RHLKVFDATCPLVTKVHMEVARLGRTGRSVVLVGHAGHPEVEGTMGQWNRAHAGEILLVE 146
Query: 132 NMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGE 191
++++ + KF A+S QTT+ +
Sbjct: 147 SVEDVATLA-------------------PKFPHALS-------------YVTQTTLSVDD 174
Query: 192 TEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWN 251
T+ I + R +E + + IC ATQ RQDA+ ++ + VDL+LVVG N
Sbjct: 175 TKAI---IAALRARFSDIEGPRK-----DDICYATQNRQDAVRRLAD-AVDLMLVVGSVN 225
Query: 252 SSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITS 311
SSN++ L+E+AE +G+ S+ ID + I + +WL G IG+T+
Sbjct: 226 SSNSNRLRELAEKQGVRSFLIDGAEHI-----------------ERSWL-DGVSRIGLTA 267
Query: 312 GASTPDKAVEDVLKKV 327
GAS P+K V DV+ ++
Sbjct: 268 GASAPEKLVRDVIARL 283
>gi|384423932|ref|YP_005633290.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
LMA3984-4]
gi|327483485|gb|AEA77892.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
LMA3984-4]
Length = 316
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 144/318 (45%), Gaps = 67/318 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L++ + + ++ + V ++V+ A G +
Sbjct: 33 IYVRHEVVHNRFVVEGLKQRGARFV------EELNEVPDDNIVIFSAHGVSQAVRQEAKE 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++ + D TCP V+KV V + + ++ G H E T G+Y
Sbjct: 87 RSLTVFDATCPLVTKVHMEVARASRKHMEVVLIGHAGHPEVEGTM---GQY--------- 134
Query: 137 EYVCDYILGGELNGSSSTKEAFL-EKFKKAVS---KGFDPDVDLVKVGIANQTTMLKGET 192
+S T +L EK + VS K DP + +QTT+ ET
Sbjct: 135 --------------ASDTGGMYLVEKPEDVVSLQVKVKDPS----NLHYVSQTTLSVDET 176
Query: 193 EEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNS 252
++ + + + G + IC ATQ RQDA+ +++ E+VD+++VVG NS
Sbjct: 177 ADVIDELRRVFPKIQGPRK--------DDICYATQNRQDAV-RILAEQVDVMVVVGSKNS 227
Query: 253 SNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSG 312
SN++ L+E+AE G P Y ID + I P W Q+ IG+T+G
Sbjct: 228 SNSTRLKELAEKLGTPGYLIDCPQDIDP-----------------EWFVDAQL-IGVTAG 269
Query: 313 ASTPDKAVEDVLKKVFEI 330
AS P++ V +L+++ E+
Sbjct: 270 ASAPEELVNQILERIKEL 287
>gi|153826772|ref|ZP_01979439.1| hydroxymethylbutenyl pyrophosphate reductase [Vibrio cholerae
MZO-2]
gi|229530491|ref|ZP_04419879.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
12129(1)]
gi|149739423|gb|EDM53663.1| hydroxymethylbutenyl pyrophosphate reductase [Vibrio cholerae
MZO-2]
gi|229332264|gb|EEN97752.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
12129(1)]
Length = 320
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 144/318 (45%), Gaps = 67/318 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L++ + + ++ + V ++V+ A G +
Sbjct: 37 IYVRHEVVHNRFVVEGLKQRGARFV------EELNEVPDDNIVIFSAHGVSQAVRQEAKE 90
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++ + D TCP V+KV V + + ++ G H E T G+Y
Sbjct: 91 RSLTVFDATCPLVTKVHMEVARASRKHMEVVLIGHAGHPEVEGTM---GQY--------- 138
Query: 137 EYVCDYILGGELNGSSSTKEAFL-EKFKKAVS---KGFDPDVDLVKVGIANQTTMLKGET 192
+S T +L EK + VS K DP + +QTT+ ET
Sbjct: 139 --------------ASDTGGMYLVEKPEDVVSLQAKVKDPS----NLHYVSQTTLSVDET 180
Query: 193 EEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNS 252
++ + + + G + IC ATQ RQDA+ +++ E+VD+++VVG NS
Sbjct: 181 ADVIDELRRVFPKIQGPRK--------DDICYATQNRQDAV-RILAEQVDVMVVVGSKNS 231
Query: 253 SNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSG 312
SN++ L+E+AE G P Y ID + I P W Q+ IG+T+G
Sbjct: 232 SNSTRLKELAEKLGTPGYLIDCPQDIDP-----------------EWFVDAQL-IGVTAG 273
Query: 313 ASTPDKAVEDVLKKVFEI 330
AS P++ V +L+++ E+
Sbjct: 274 ASAPEELVNQILERIKEL 291
>gi|419835605|ref|ZP_14359050.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-46B1]
gi|421342023|ref|ZP_15792430.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-43B1]
gi|421353492|ref|ZP_15803825.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HE-45]
gi|422909200|ref|ZP_16943852.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HE-09]
gi|423733967|ref|ZP_17707183.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-41B1]
gi|424008252|ref|ZP_17751202.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-44C1]
gi|424658553|ref|ZP_18095810.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HE-16]
gi|341635790|gb|EGS60496.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HE-09]
gi|395945526|gb|EJH56191.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-43B1]
gi|395954839|gb|EJH65448.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HE-45]
gi|408055037|gb|EKG89991.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HE-16]
gi|408631737|gb|EKL04265.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-41B1]
gi|408859018|gb|EKL98688.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-46B1]
gi|408866122|gb|EKM05511.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-44C1]
Length = 316
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 144/318 (45%), Gaps = 67/318 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L++ + + ++ + V ++V+ A G +
Sbjct: 33 IYVRHEVVHNRFVVEGLKQRGARFV------EELNEVPDDNIVIFSAHGVSQAVRQEAKE 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++ + D TCP V+KV V + + ++ G H E T G+Y
Sbjct: 87 RSLTVFDATCPLVTKVHMEVARASRKHMEVVLIGHAGHPEVEGTM---GQY--------- 134
Query: 137 EYVCDYILGGELNGSSSTKEAFL-EKFKKAVS---KGFDPDVDLVKVGIANQTTMLKGET 192
+S T +L EK + VS K DP + +QTT+ ET
Sbjct: 135 --------------ASDTGGMYLVEKPEDVVSLQAKVKDPS----NLHYVSQTTLSVDET 176
Query: 193 EEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNS 252
++ + + + G + IC ATQ RQDA+ +++ E+VD+++VVG NS
Sbjct: 177 ADVIDELRRVFPKIQGPRK--------DDICYATQNRQDAV-RILAEQVDVMVVVGSKNS 227
Query: 253 SNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSG 312
SN++ L+E+AE G P Y ID + I P W Q+ IG+T+G
Sbjct: 228 SNSTRLKELAEKLGTPGYLIDCPQDIDP-----------------EWFVAAQL-IGVTAG 269
Query: 313 ASTPDKAVEDVLKKVFEI 330
AS P++ V +L+++ E+
Sbjct: 270 ASAPEELVNQILERIKEL 287
>gi|153215128|ref|ZP_01949835.1| hydroxymethylbutenyl pyrophosphate reductase [Vibrio cholerae 1587]
gi|124114919|gb|EAY33739.1| hydroxymethylbutenyl pyrophosphate reductase [Vibrio cholerae 1587]
Length = 320
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 144/318 (45%), Gaps = 67/318 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L++ + + ++ + V ++V+ A G +
Sbjct: 37 IYVRHEVVHNRFVVEGLKQRGARFV------EELNEVPDDNIVIFSAHGVSQAVRQEAKE 90
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++ + D TCP V+KV V + + ++ G H E T G+Y
Sbjct: 91 RSLTVFDATCPLVTKVHMEVARASRKHMEVVLIGHAGHPEVEGTM---GQY--------- 138
Query: 137 EYVCDYILGGELNGSSSTKEAFL-EKFKKAVS---KGFDPDVDLVKVGIANQTTMLKGET 192
+S T +L EK + VS K DP + +QTT+ ET
Sbjct: 139 --------------ASDTGGMYLVEKPEDVVSLQAKVKDPS----NLHYVSQTTLSVDET 180
Query: 193 EEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNS 252
++ + + + G + IC ATQ RQDA+ +++ E+VD+++VVG NS
Sbjct: 181 ADVIDELRRVFPKIQGPRK--------DDICYATQNRQDAV-RILAEQVDVMVVVGSKNS 231
Query: 253 SNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSG 312
SN++ L+E+AE G P Y ID + I P W Q+ IG+T+G
Sbjct: 232 SNSTRLKELAEKLGTPGYLIDCPQDIDP-----------------EWFVAAQL-IGVTAG 273
Query: 313 ASTPDKAVEDVLKKVFEI 330
AS P++ V +L+++ E+
Sbjct: 274 ASAPEELVNQILERIKEL 291
>gi|269795925|ref|YP_003315380.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Sanguibacter
keddieii DSM 10542]
gi|269098110|gb|ACZ22546.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Sanguibacter
keddieii DSM 10542]
Length = 353
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 142/334 (42%), Gaps = 75/334 (22%)
Query: 2 AFIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVL 61
A IA E I++ EI+HN V + L + I V+E D V +G VV
Sbjct: 38 AVIAVEKALALHGAPIYVRKEIVHNKYVVETLSDRGA--IFVDE----TDEVPEGARVVF 91
Query: 62 PAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATA 121
A G + + +++Q +D TCP V+KV + DY ++ G HEE TA
Sbjct: 92 SAHGVSPAVVAAAEERSLQTIDATCPLVTKVHKEAVRFASEDYDILLIGHDGHEEVEGTA 151
Query: 122 SFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGI 181
A +I + N + + K V + DPD KV
Sbjct: 152 GEAPDHIQIVNSPD-------------------------EVDKVVVR--DPD----KVIW 180
Query: 182 ANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKM 236
+QTT+ ET E V + E F + + IC ATQ RQ A+ K+
Sbjct: 181 ISQTTLSVDETMET-------------VRRLRERFPTLQDPPSDDICYATQNRQVAVKKL 227
Query: 237 VEEKVDLILVVGGWNSSNTSHLQEIAEDRGI-PSYWIDSEKRIGPGNKIAYKLMHGELVE 295
E DL++VVG NSSN+ L E+A + G SY +D K I
Sbjct: 228 APE-CDLVIVVGSTNSSNSVRLVEVALNAGARSSYLVDYAKEI----------------- 269
Query: 296 KENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 329
E+W +G T+G+TSGAS P+ V++VL + E
Sbjct: 270 DESWF-EGVRTVGVTSGASVPEILVDEVLAYLAE 302
>gi|238028401|ref|YP_002912632.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
glumae BGR1]
gi|237877595|gb|ACR29928.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
glumae BGR1]
Length = 326
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 141/314 (44%), Gaps = 64/314 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V + L+ I VEE + V G+ V+ A G +
Sbjct: 48 IYVRHEIVHNKYVVEDLKTKGA--IFVEE----LEEVPSGNTVIFSAHGVSKAVRDEAAV 101
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ ++I D TCP V+KV V K ++ ++ G H E T + + M
Sbjct: 102 RGLRIYDATCPLVTKVHVEVAKMRQDGVDIVMIGHKGHPEVEGTMGQ-----VERGMHLV 156
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
E V D +L EL DP+ +V + QTT+ + EI
Sbjct: 157 ESVED-VLALELP---------------------DPE----RVALVTQTTLSVDDAAEI- 189
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+ RKF + E IC ATQ RQDA+ K + + D+++VVG NSSN+S
Sbjct: 190 ---IAALKRKF--PAIREP--KKQDICYATQNRQDAV-KFMAPQCDVVIVVGSPNSSNSS 241
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L+E+AE RG+ +Y +DS +I P W+ G+ IG+T+GAS P
Sbjct: 242 RLREVAEKRGVDAYMVDSPDQIDPA-----------------WV-AGKRRIGVTAGASAP 283
Query: 317 DKAVEDVLKKVFEI 330
+ + V+ ++ E+
Sbjct: 284 EVLAQAVIARLREL 297
>gi|254227213|ref|ZP_04920712.1| hydroxymethylbutenyl pyrophosphate reductase [Vibrio cholerae V51]
gi|125620263|gb|EAZ48698.1| hydroxymethylbutenyl pyrophosphate reductase [Vibrio cholerae V51]
Length = 289
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 144/318 (45%), Gaps = 67/318 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L++ + + ++ + V ++V+ A G +
Sbjct: 6 IYVRHEVVHNRFVVEGLKQRGARFV------EELNEVPDDNIVIFSAHGVSQAVRQEAKE 59
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++ + D TCP V+KV V + + ++ G H E T G+Y
Sbjct: 60 RSLTVFDATCPLVTKVHMEVARASRKHMEVVLIGHAGHPEVEGTM---GQY--------- 107
Query: 137 EYVCDYILGGELNGSSSTKEAFL-EKFKKAVS---KGFDPDVDLVKVGIANQTTMLKGET 192
+S T +L EK + VS K DP + +QTT+ ET
Sbjct: 108 --------------ASDTGGMYLVEKPEDVVSLQAKVKDPS----NLHYVSQTTLSVDET 149
Query: 193 EEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNS 252
++ + + + G + IC ATQ RQDA+ +++ E+VD+++VVG NS
Sbjct: 150 ADVIDELRRVFPKIQGPRK--------DDICYATQNRQDAV-RILAEQVDVMVVVGSKNS 200
Query: 253 SNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSG 312
SN++ L+E+AE G P Y ID + I P W Q+ IG+T+G
Sbjct: 201 SNSTRLKELAEKLGTPGYLIDCPQDIDP-----------------EWFVDAQL-IGVTAG 242
Query: 313 ASTPDKAVEDVLKKVFEI 330
AS P++ V +L+++ E+
Sbjct: 243 ASAPEELVNQILERIKEL 260
>gi|229512424|ref|ZP_04401898.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
TMA 21]
gi|229350574|gb|EEO15520.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
TMA 21]
Length = 320
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 142/317 (44%), Gaps = 65/317 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L++ + + ++ + V ++V+ A G +
Sbjct: 37 IYVRHEVVHNRFVVEGLKQRGARFV------EELNEVPDDNIVIFSAHGVSQAVRQEAKE 90
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++ + D TCP V+KV V + + ++ G H E T G+Y
Sbjct: 91 RSLTVFDATCPLVTKVHMEVARASRKHMEVVLIGHAGHPEVEGTM---GQY--------- 138
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVS---KGFDPDVDLVKVGIANQTTMLKGETE 193
S + +EK + VS K DP + +QTT+ ET
Sbjct: 139 -------------ASDTGGMYLVEKPEDVVSLQVKVKDPS----NLHYVSQTTLSVDETA 181
Query: 194 EIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSS 253
++ + + + G + IC ATQ RQDA+ +++ E+VD+++VVG NSS
Sbjct: 182 DVIDELRRVFPKIQGPRK--------DDICYATQNRQDAV-RILAEQVDVMVVVGSKNSS 232
Query: 254 NTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGA 313
N++ L+E+AE G P Y ID + I P W Q+ IG+T+GA
Sbjct: 233 NSTRLKELAEKLGTPGYLIDCPQDIDP-----------------EWFVDAQL-IGVTAGA 274
Query: 314 STPDKAVEDVLKKVFEI 330
S P++ V +L+++ E+
Sbjct: 275 SAPEELVNQILERIKEL 291
>gi|350559914|ref|ZP_08928754.1| hydroxymethylbutenyl pyrophosphate reductase [Thioalkalivibrio
thiocyanoxidans ARh 4]
gi|349782182|gb|EGZ36465.1| hydroxymethylbutenyl pyrophosphate reductase [Thioalkalivibrio
thiocyanoxidans ARh 4]
Length = 312
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 136/311 (43%), Gaps = 64/311 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +E++HN V RL V + + D V G VV+ A G
Sbjct: 33 LYVRHEVVHNRHVVDRLRAGGVVFV------DELDEVPDGQVVIFSAHGVPKRVQDEAAR 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKE 135
+ +Q+ D TCP V+KV V ++ + ++ G H E T FA +
Sbjct: 87 RGLQVFDATCPLVTKVHLEVARYAREGREVVLIGHAGHPEVEGTLGQFAPAH-------- 138
Query: 136 AEYVCDYILGGELNGSSSTKE-AFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEE 194
GG + + ++ A LE VS DPD ++ +QTT+ +T
Sbjct: 139 ---------GGRMYLVEAPEDVAGLE-----VS---DPD----RLAYVSQTTLSMDDTAA 177
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
+ + R G ++ IC ATQ RQDA+ ++V + DL+LVVG NSSN
Sbjct: 178 VIDALRARFPRIEGPRKMD--------ICYATQNRQDAVKELVRQ-CDLLLVVGSGNSSN 228
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
++ L+EI G+ SY +D + P WL +G+ IG+T+GAS
Sbjct: 229 SNRLREIGARAGVESYLVDGPADVEPA-----------------WL-EGKRHIGVTAGAS 270
Query: 315 TPDKAVEDVLK 325
P+ V ++++
Sbjct: 271 APEILVRELIE 281
>gi|222055456|ref|YP_002537818.1| hydroxymethylbutenyl pyrophosphate reductase [Geobacter daltonii
FRC-32]
gi|254806907|sp|B9LZG4.1|ISPH_GEOSF RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|221564745|gb|ACM20717.1| hydroxymethylbutenyl pyrophosphate reductase [Geobacter daltonii
FRC-32]
Length = 282
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 150/332 (45%), Gaps = 73/332 (21%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
IA+EA + K + IIH+P V ++LEEM V+ + G + +++ +
Sbjct: 21 IAFEAAGKGG--KTFTLGPIIHSPQVVQKLEEMGVKALENVAGMDE-------GTIIIRS 71
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
GAA +E+ K + I+D TCP+V K V+ Y ++ G H E S+
Sbjct: 72 HGAASDELEEAVRKQLDILDATCPFVKKAQEHVKNLSNSGYDVVVVGDADHPEVQGIVSY 131
Query: 124 A-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIA 182
A GK +V + +EA K K + K+G+
Sbjct: 132 ATGKVYVVASGEEAV-----------------------KLPK-----------MGKIGVV 157
Query: 183 NQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVD 242
QTT E + +V+ +++ + F+TICDAT RQ+ K+ + VD
Sbjct: 158 AQTTQ---SFENLRHVVDACLVKGGEIR-------VFHTICDATAVRQEEAKKLASQ-VD 206
Query: 243 LILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPK 302
++V+GG+NS+NT L E++ + ++ I+ +++ P W +
Sbjct: 207 CMVVIGGYNSANTKRLAEVSAEIQPRTHHIEMAQQLDPA-----------------WF-E 248
Query: 303 GQITIGITSGASTPDKAVEDVLKKVFEIKREE 334
G +GIT+GASTP +++VL+++ I +++
Sbjct: 249 GVKIVGITAGASTPKWIIDEVLEQIESIAKDK 280
>gi|68165330|gb|AAY87625.1| LytB [Vibrio cholerae]
gi|68165334|gb|AAY87627.1| LytB [Vibrio cholerae]
Length = 280
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 144/318 (45%), Gaps = 67/318 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L++ + + ++ + V ++V+ A G +
Sbjct: 25 IYVRHEVVHNRFVVEGLKQRGARFV------EELNEVPDDNIVIFSAHGVSQAVRQEAKE 78
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++ + D TCP V+KV V + + ++ G H E T G+Y
Sbjct: 79 RSLTVFDATCPLVTKVHMEVARASRKHMEVVLIGHAGHPEVEGTM---GQY--------- 126
Query: 137 EYVCDYILGGELNGSSSTKEAFL-EKFKKAVS---KGFDPDVDLVKVGIANQTTMLKGET 192
+S T +L EK + VS K DP + +QTT+ ET
Sbjct: 127 --------------ASDTGGMYLVEKPEDVVSLQAKVKDPS----NLHYVSQTTLSVDET 168
Query: 193 EEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNS 252
++ + + + G + IC ATQ RQDA+ +++ E+VD+++VVG NS
Sbjct: 169 ADVIDELRRVFPKIQGPRK--------DDICYATQNRQDAV-RILAEQVDVMVVVGSKNS 219
Query: 253 SNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSG 312
SN++ L+E+AE G P Y ID + I P W Q+ IG+T+G
Sbjct: 220 SNSTRLKELAEKLGTPGYLIDCPQDIDP-----------------EWFVAAQL-IGVTAG 261
Query: 313 ASTPDKAVEDVLKKVFEI 330
AS P++ V +L+++ E+
Sbjct: 262 ASAPEELVNQILERIKEL 279
>gi|184200358|ref|YP_001854565.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Kocuria
rhizophila DC2201]
gi|183580588|dbj|BAG29059.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Kocuria
rhizophila DC2201]
Length = 351
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 144/328 (43%), Gaps = 63/328 (19%)
Query: 2 AFIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVL 61
A IA E + +++ EI+HN V + LEE + VEE D V +G +VV
Sbjct: 40 AVIAVEKALEHYGAPVYVRKEIVHNKHVVQTLEERGA--VFVEE----TDEVPEGSLVVF 93
Query: 62 PAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATA 121
A G + + + +++N+ +D TCP V+KV + K DY ++ G HEE T
Sbjct: 94 SAHGVSPAVVQSAHDRNLHTIDATCPLVTKVHREAVRFAKNDYEILLIGHVGHEEVEGTF 153
Query: 122 SFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGI 181
A ++I + N E T E DPD KV
Sbjct: 154 GEAPEHIQIVNSPE---------------DVDTLEV------------HDPD----KVVW 182
Query: 182 ANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKV 241
+QTT+ ET E + + + N + IC AT RQ A+ K + +
Sbjct: 183 LSQTTLSVDETME--------TVNRLRAKFPNMIDPPSDDICYATSNRQAAI-KEIAPQA 233
Query: 242 DLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLP 301
DL+LVVG NSSN+ L+E+A + Y +R+ N++ E+W
Sbjct: 234 DLVLVVGSANSSNSVRLKEVALE-----YGARRAERVDFANQV-----------DESWF- 276
Query: 302 KGQITIGITSGASTPDKAVEDVLKKVFE 329
+G T+G+TSGAS P+ V+ VL + E
Sbjct: 277 EGVATVGLTSGASVPEVLVQQVLDLLAE 304
>gi|71276191|ref|ZP_00652470.1| LytB protein [Xylella fastidiosa Dixon]
gi|71162952|gb|EAO12675.1| LytB protein [Xylella fastidiosa Dixon]
gi|71727966|gb|EAO30187.1| LytB protein [Xylella fastidiosa Ann-1]
Length = 316
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 136/320 (42%), Gaps = 71/320 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L++ I VEE + V G V+ A G +
Sbjct: 33 IYVRHEVVHNRFVVDDLKQRGA--IFVEELHQ----VPDGATVIFSAHGVSQAVRRQAAQ 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATAS------FAGKYIIV 130
+ +++ D TCP V+KV V +H + I+ G H E T G+ +V
Sbjct: 87 RGLKVFDATCPLVTKVHLDVARHCRTGRDMILIGHAGHPEVEGTMGQWDQERGTGRIYLV 146
Query: 131 KNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKG 190
+N+ + L+ + A+ QTT+
Sbjct: 147 ENIDDV---------AALHVAQRHHLAY-----------------------TTQTTLSVD 174
Query: 191 ETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGW 250
+T I + + G +N N IC ATQ RQDA+ ++ E DL+LVVG
Sbjct: 175 DTRNIIDALRQRFPTIQGPKN--------NDICYATQNRQDAVRELARE-CDLVLVVGSP 225
Query: 251 NSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGIT 310
NSSN++ L E+A+ G+ SY IDS I P +++K + IG+T
Sbjct: 226 NSSNSNRLSELAQREGVASYLIDSAAEIDP----------AWVIDKHH--------IGVT 267
Query: 311 SGASTPDKAVEDVLKKVFEI 330
+GAS P V+ VL +++E+
Sbjct: 268 AGASAPQVLVDGVLARLYEL 287
>gi|166031926|ref|ZP_02234755.1| hypothetical protein DORFOR_01627 [Dorea formicigenerans ATCC
27755]
gi|166028379|gb|EDR47136.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Dorea
formicigenerans ATCC 27755]
Length = 294
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 139/314 (44%), Gaps = 65/314 (20%)
Query: 15 EKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTL 74
EKI+ IIHN V K +E+ V+ I EE KQ + +V++ + G L
Sbjct: 41 EKIYTYGPIIHNEEVIKDMEKKGVEVILSEEELKQIE----SGIVIIRSHGVPKRICDLL 96
Query: 75 NNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA-GKYIIVKNM 133
+ V+ VD TCP+V K+ VE+ + Y +I G H E + +A G I++
Sbjct: 97 DENGVRYVDATCPFVKKIHRIVEEKSRDGYHIVIIGNREHPEVMGIEGWAQGPATIIQTE 156
Query: 134 KEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETE 193
+EA + F+ + KV + QTT
Sbjct: 157 EEA-------------------------------RAFELVPESEKVCVVAQTTF---NYN 182
Query: 194 EIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSS 253
+ LVE +++ + I NTIC+AT+ERQ+ Y + ++VD ++V+G SS
Sbjct: 183 KFKDLVEIISEKRYDI-------IVLNTICNATKERQEEAYD-IAKRVDAMIVIGDKRSS 234
Query: 254 NTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGA 313
NT L EI + +Y+I + +G N N L + T+GIT+GA
Sbjct: 235 NTQKLFEICSNACADTYYIQT---LGDLNM--------------NQLRSVE-TVGITAGA 276
Query: 314 STPDKAVEDVLKKV 327
STP+K +E+V V
Sbjct: 277 STPNKIIEEVQNNV 290
>gi|218961512|ref|YP_001741287.1| putative bifunctional Cytidylate kinase /
4-hydroxy-3-methylbut-2-enyl diphosphate reductase
(Cytidine monophosphate kinase /
Isopentenyl-diphosphate:NAD(P)+ oxidoreductase)
(cmk/ispH-like) [Candidatus Cloacamonas acidaminovorans]
gi|167730169|emb|CAO81081.1| putative bifunctional Cytidylate kinase /
4-hydroxy-3-methylbut-2-enyl diphosphate reductase
(Cytidine monophosphate kinase /
Isopentenyl-diphosphate:NAD(P)+ oxidoreductase)
(cmk/ispH-like) [Candidatus Cloacamonas acidaminovorans
str. Evry]
Length = 535
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 140/322 (43%), Gaps = 85/322 (26%)
Query: 14 EEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGD-----VVVLPAFGAAV 68
E+ ++ E+IHNP + + LEE + +VNK + V++ + G
Sbjct: 269 EKPVYTLGELIHNPAIVQELEEQGIH------------IVNKAEEVKNSTVIIRSHGITK 316
Query: 69 EEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYI 128
EE L N +I+D TCP+V + T ++ K +Y +I G H+E + S+
Sbjct: 317 EEYKILKENNNEIIDATCPYVKRTHTILKHLVKENYPVLILGDKQHQEVIGIRSYGN--- 373
Query: 129 IVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTML 188
E +V GE + KE ++ I QTT
Sbjct: 374 ------EKTFVI-----GEDDPIPKIKEK--------------------RLAIMAQTTQ- 401
Query: 189 KGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVG 248
E++ +LV K + N NE + FNTIC AT +RQ A ++ +E D + V+G
Sbjct: 402 --RIEKLQELVYKLL------SNFNELRV-FNTICLATTQRQKAAEELAQES-DAMFVIG 451
Query: 249 GWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIG 308
G SSNT L +++ P+Y I+ EK++ + YK IG
Sbjct: 452 GLKSSNTCALAKLSSVY-CPTYHIEDEKQLASIDISPYK------------------CIG 492
Query: 309 ITSGASTPDKAVEDVLKKVFEI 330
IT+GASTP E+++ KV+ +
Sbjct: 493 ITAGASTP----EEMIIKVYNV 510
>gi|420256543|ref|ZP_14759383.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Burkholderia sp. BT03]
gi|398043024|gb|EJL35967.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Burkholderia sp. BT03]
Length = 319
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 139/314 (44%), Gaps = 64/314 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V + L + I +Q D V G V+ A G + +
Sbjct: 43 IYVRHEIVHNAYVVEDLRKKGAIFI------EQLDEVPSGSTVIFSAHGVSKAVRAEADE 96
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V K + + ++ G H E T + E
Sbjct: 97 RGLRVYDATCPLVTKVHIEVAKMRAEGFDIVMIGHKGHPEVEGT---------MGQTAEG 147
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
Y+ + +++ + + A DP+ ++ QTT+ + +I
Sbjct: 148 MYLVE-----DIDDVQALQLA-------------DPE----RIAYVTQTTLSVDDAAQI- 184
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+ KF NV E IC ATQ RQDA+ K + + D+++VVG NSSN++
Sbjct: 185 ---IAALKAKF--PNVKEP--KKQDICYATQNRQDAV-KFMAPQCDVVIVVGSPNSSNSN 236
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L+E+AE G+PSY +DS +I P W+ + IG+T+GAS P
Sbjct: 237 RLRELAEKLGVPSYMVDSPDQIDPA-----------------WVADKR-RIGVTAGASAP 278
Query: 317 DKAVEDVLKKVFEI 330
+ + V+ ++ E+
Sbjct: 279 EALAQAVIGRLREL 292
>gi|423016435|ref|ZP_17007156.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Achromobacter
xylosoxidans AXX-A]
gi|338780582|gb|EGP44988.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Achromobacter
xylosoxidans AXX-A]
Length = 325
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 138/316 (43%), Gaps = 68/316 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V + L I + D G +VV A G +
Sbjct: 42 IYVRHEIVHNRYVVEDLRAKGAIFI------DELDDAPAGAIVVFSAHGVSKAVRAEAEA 95
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA--GKYIIVKNMK 134
+ Q+ D TCP V+KV V + + I+ G H E T A G Y++
Sbjct: 96 RGQQVFDATCPLVTKVHIEVARMRAAGREIIMIGHKGHPEVEGTLGQAQGGMYLV----- 150
Query: 135 EAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEE 194
E V D + G ++ DPD + QTT+ + +
Sbjct: 151 --ETVED-VAGLQVT---------------------DPD----NLAYVTQTTL----SVD 178
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
V K + +F ++ E S IC ATQ RQDA+ K++ + DL+LVVG NSSN
Sbjct: 179 DAAAVSKALKARF--PSIVEPKKS--DICYATQNRQDAV-KVLAPECDLVLVVGSPNSSN 233
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
++ L+E+A+ +G+ SY ID I P WL +G+ IG+T+GAS
Sbjct: 234 SNRLREVADRKGVASYLIDGAHSIDPA-----------------WL-EGRKRIGVTAGAS 275
Query: 315 TPDKAVEDVLKKVFEI 330
P+ V+ V+ +V E+
Sbjct: 276 APEILVQQVIARVKEL 291
>gi|170730683|ref|YP_001776116.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Xylella
fastidiosa M12]
gi|238687929|sp|B0U3Q7.1|ISPH_XYLFM RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|167965476|gb|ACA12486.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Xylella
fastidiosa M12]
Length = 316
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 136/320 (42%), Gaps = 71/320 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L++ I VEE + V G V+ A G +
Sbjct: 33 IYVRHEVVHNRFVVDDLKQRGA--IFVEELHQ----VPDGATVIFSAHGVSQAVRRQAAQ 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATAS------FAGKYIIV 130
+ +++ D TCP V+KV V +H + I+ G H E T G+ +V
Sbjct: 87 RGLKVFDATCPLVTKVHLDVARHCRTGRDMILIGHAGHPEVEGTMGQWDQERGTGRIYLV 146
Query: 131 KNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKG 190
+N+ + L+ + A+ QTT+
Sbjct: 147 ENIDDV---------AALHVAQPHHLAY-----------------------TTQTTLSVD 174
Query: 191 ETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGW 250
+T I + + G +N N IC ATQ RQDA+ ++ E DL+LVVG
Sbjct: 175 DTRNIIDALRQRFPTIQGPKN--------NDICYATQNRQDAVRELARE-CDLVLVVGSP 225
Query: 251 NSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGIT 310
NSSN++ L E+A+ G+ SY IDS I P +++K + IG+T
Sbjct: 226 NSSNSNRLSELAQREGVASYLIDSAAEIDP----------AWVIDKHH--------IGVT 267
Query: 311 SGASTPDKAVEDVLKKVFEI 330
+GAS P V+ VL +++E+
Sbjct: 268 AGASAPQVLVDGVLARLYEL 287
>gi|91201335|emb|CAJ74395.1| unknown protein [Candidatus Kuenenia stuttgartiensis]
Length = 584
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 140/322 (43%), Gaps = 89/322 (27%)
Query: 16 KIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVN-----KGDVVVLPAFGAAVEE 70
K++ +IHNP V + LE K+ +VN VV+ A G
Sbjct: 38 KVYTDGPLIHNPQVLEYLE------------KRDLHIVNDVTDLSNSTVVIRAHGVTPSR 85
Query: 71 MVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA-GKYII 129
+ +K ++ D TCP V +V + ++K+ Y++II G H E V +A G+ +
Sbjct: 86 RAEIESKGAKVCDATCPHVMRVQSIIKKYAAQGYSTIIVGDNGHAEVVGLLGYAEGRGHV 145
Query: 130 VKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTT--- 186
V+NM+ E + P +D KV I QTT
Sbjct: 146 VENMENIELL--------------------------------PPMD--KVCIVAQTTQDR 171
Query: 187 -MLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLIL 245
+ K +EI + + SF TIC +T +RQD + + + VD ++
Sbjct: 172 HLFKRAIDEIKRRYPNSE--------------SFETICSSTYKRQDEVVNLCKS-VDAMI 216
Query: 246 VVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQI 305
VVGG S+NT+ L I E +G P++ ++++ I NK+ K+ +
Sbjct: 217 VVGGRGSANTTRLVTICESQGTPTFHVETDSEIDL-NKL--KVFN--------------- 258
Query: 306 TIGITSGASTPDKAVEDVLKKV 327
TIG+T+GASTP+ ++ V+ KV
Sbjct: 259 TIGVTAGASTPNWMIKRVVDKV 280
>gi|188997063|ref|YP_001931314.1| hydroxymethylbutenyl pyrophosphate reductase [Sulfurihydrogenibium
sp. YO3AOP1]
gi|188932130|gb|ACD66760.1| hydroxymethylbutenyl pyrophosphate reductase [Sulfurihydrogenibium
sp. YO3AOP1]
Length = 288
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 146/331 (44%), Gaps = 68/331 (20%)
Query: 4 IAYEARKQFPEE--KIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVL 61
IA + KQ E+ + IIHN V L+ + V+ + + + + GD V++
Sbjct: 18 IAVDMAKQAGEKLGHAYTNGPIIHNKQVVNYLKSIGVEEM------QDYSQLKPGDTVII 71
Query: 62 PAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATA 121
+ G + L N+ ++D TCP+V KV V++ + Y +I G+ H E + T
Sbjct: 72 RSHGVPPKTERMLKELNINVLDATCPFVKKVHDKVKQLVEEGYFVVIIGEEGHPEVIGTL 131
Query: 122 SFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGI 181
E+ G E F + KK + ++G+
Sbjct: 132 GHLE---------------------EVGGKGVVVENFEDLVKKVPKRN--------RIGV 162
Query: 182 ANQTTMLKGE-TEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEK 240
QTT + E +G L E T E FNTICDAT RQ+ + K+ E
Sbjct: 163 VAQTTQSEDFFREAVGYLAENT-----------EELKVFNTICDATSVRQEEVKKIAPE- 210
Query: 241 VDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWL 300
VD+++++GG +S NT L +I++ +Y I++ A +L + KEN
Sbjct: 211 VDVMIIIGGKHSGNTQRLYQISKALNPNTYHIET----------ADELQNQWFENKEN-- 258
Query: 301 PKGQITIGITSGASTPDKAVEDVLKKVFEIK 331
IGI++GASTPD +++V+ K+ EIK
Sbjct: 259 ------IGISAGASTPDWIIQEVVNKIKEIK 283
>gi|170690903|ref|ZP_02882069.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia graminis
C4D1M]
gi|170144152|gb|EDT12314.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia graminis
C4D1M]
Length = 314
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 139/311 (44%), Gaps = 70/311 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V L + + + ++ D V +G V + A G A
Sbjct: 33 VYVRHEIVHNRHVVDNLRQKGARFV------EELDEVPQGAVAIFSAHGVAQTVERDAEA 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKE 135
+ + ++D TCP V+KV ++ T I+ G H E T GK ++V++ E
Sbjct: 87 RGLDVLDATCPLVTKVHVQGRQYVAAGRTLILIGHAGHPEVEGTIGQIPGKVLLVQSEAE 146
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
E+ LN T A++ QTT+ +T I
Sbjct: 147 VEH---------LNLPVDTPLAYV-----------------------TQTTLSVDDTRGI 174
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNT--ICDATQERQDAMYKMVEEKVDLILVVGGWNSS 253
++R+F + +T IC ATQ RQ A+ ++ ++VD++LVVG NSS
Sbjct: 175 ----IDALLRRF------NDIVGPDTRDICYATQNRQAAVREL-SKQVDVLLVVGATNSS 223
Query: 254 NTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGA 313
N++ L+EI + G+ SY + G+++ K+ W Q TIGIT+GA
Sbjct: 224 NSNRLREIGSESGVASYL------VADGSEV-----------KQEWFANAQ-TIGITAGA 265
Query: 314 STPDKAVEDVL 324
S P++ V++V+
Sbjct: 266 SAPEEMVKNVI 276
>gi|414154798|ref|ZP_11411115.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Desulfotomaculum hydrothermale Lam5 = DSM 18033]
gi|411453629|emb|CCO09019.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Desulfotomaculum hydrothermale Lam5 = DSM 18033]
Length = 675
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 139/331 (41%), Gaps = 76/331 (22%)
Query: 1 MAFIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVV 60
MA A +K I+ +IHNP V + L V+ I V +G +++
Sbjct: 24 MALQAARVKKA----NIYTLGPLIHNPQVVQDLARQGVKEI------NDLAEVTEGSIII 73
Query: 61 LPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT 120
+ G + K ++I+D TCP+V++ + + I G H E
Sbjct: 74 R-SHGVGPQIFQQAGEKGLEIIDATCPFVARAQRAAHAMAEQGLPVFILGDPGHPEVQGI 132
Query: 121 ASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKV 179
+A G ++++N + V D KV
Sbjct: 133 LGWAMGMGVVIENADQLSRV-----------------------------------DHPKV 157
Query: 180 GIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEE 239
G+ QTT KLVE + K GVE + NTIC AT ERQ A ++ +
Sbjct: 158 GVVAQTTQ---PLANYLKLVEA--LEKQGVE-----VDARNTICHATGERQRAALELAQ- 206
Query: 240 KVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENW 299
KVD+++VVGG NS+NT L I ++ G P+Y ++S + + +E W
Sbjct: 207 KVDVMVVVGGKNSANTKKLARICQETGTPTYHVESAQEL-----------------REEW 249
Query: 300 LPKGQITIGITSGASTPDKAVEDVLKKVFEI 330
G +G+T+GASTPD +E+V +++ ++
Sbjct: 250 F-YGHRILGLTAGASTPDAIIEEVKRRMKDL 279
>gi|333984328|ref|YP_004513538.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Methylomonas
methanica MC09]
gi|333808369|gb|AEG01039.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Methylomonas
methanica MC09]
Length = 318
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 140/318 (44%), Gaps = 73/318 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN TV L+E I +E+ V G ++ A G + E
Sbjct: 33 IYVRHEVVHNRTVVDGLKEKGA--IFIED----LSDVPVGSYLIFSAHGVSKEVQREAEE 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ + + D TCP V+KV V KH K D I+ G H E T
Sbjct: 87 RQLTVFDATCPLVTKVHMQVAKHAKQDREVILIGHAGHPEVEGTM--------------- 131
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVS--KGFDPDVDLVKVGIANQTTMLKGETEE 194
G+ + + +L + + V + +PD + QTT+ +T
Sbjct: 132 ---------GQYEKCTEHGDIYLVETPEDVKSLQVNNPD----NLAYVTQTTLSMTDT-- 176
Query: 195 IGKLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGG 249
K V+ + E F S + IC ATQ RQDA++ + + DLILVVG
Sbjct: 177 -----------KVMVDALRERFSSIKEQKKDDICYATQNRQDAVHDL-SKISDLILVVGS 224
Query: 250 WNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGI 309
NSSN++ L+EIAE G P+Y ID+ H +L K+ WL G +G+
Sbjct: 225 PNSSNSNRLREIAEQLGKPAYLIDT---------------HTDL--KKEWL-DGINVVGV 266
Query: 310 TSGASTPDKAVEDVLKKV 327
T+GAS P+ V++V+ ++
Sbjct: 267 TAGASAPEVLVQEVINQL 284
>gi|110802077|ref|YP_698474.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
perfringens SM101]
gi|122956726|sp|Q0STT3.1|ISPH_CLOPS RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|110682578|gb|ABG85948.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
perfringens SM101]
Length = 282
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 150/326 (46%), Gaps = 67/326 (20%)
Query: 5 AYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAF 64
A + +K+F + KI+ +IHN V LE+ + I + + + +NKGDVV++ +
Sbjct: 24 AIKYQKEFGK-KIYTLGPLIHNNDVVNYLEDNDIFAIELSDT----NSLNKGDVVLIRSH 78
Query: 65 GAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA 124
G + L +K + + + TCP+V+ + V+K + Y II G +H E + +
Sbjct: 79 GVKESVIKDLTDKGLIVKNATCPYVTNIQLKVKKCYEQGYKIIIVGDENHPEVIGINGWC 138
Query: 125 GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQ 184
I+ N K LE KV + +Q
Sbjct: 139 NDSAIITNGKTE----------------------LENIP-------------AKVCVVSQ 163
Query: 185 TTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLI 244
TT E +E V ++++ ++ ++FNTIC AT RQ ++ ++ +E DL+
Sbjct: 164 TT----EKKETWNKVLNEIVKE------SKEIVAFNTICSATDVRQKSVQELSKE-ADLV 212
Query: 245 LVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQ 304
V+GG NSSNT+ L EI + SY I++ K + L+ E V+
Sbjct: 213 FVIGGKNSSNTTKLYEICKKECPKSYHIENVKELDES------LLEDESVK--------- 257
Query: 305 ITIGITSGASTPDKAVEDVLKKVFEI 330
TIGIT+GASTPD + +V+ K+ E+
Sbjct: 258 -TIGITAGASTPDWIINEVISKIKEL 282
>gi|420505850|ref|ZP_15004365.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-74]
gi|393115355|gb|EJC15865.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-74]
Length = 274
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 138/312 (44%), Gaps = 67/312 (21%)
Query: 19 ITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKN 78
I +IHN RLE+ N+ +EE K+ + K V++ G +++ L NK
Sbjct: 30 IFGSLIHNAKEINRLEKNF--NVKIEEDPKK---IPKNKSVIIRTHGIPKQDLEYLKNKG 84
Query: 79 VQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEY 138
V+I D TCP+V K VE K Y ++ G +H E S+A +V
Sbjct: 85 VKITDATCPYVIKPQQIVESMSKEGYQIVLFGDINHPEVKGVISYATNQALV-------- 136
Query: 139 VCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKL 198
+N +E L++ KV + +QTT ++ KL
Sbjct: 137 ---------VNSLEELQEKKLQR----------------KVALVSQTT------KQTPKL 165
Query: 199 VEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHL 258
++ + + VE E I FNTIC+AT Q A + +E VD+++VVGG SSNT L
Sbjct: 166 LQ---IASYLVERCTEVRI-FNTICNATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQL 220
Query: 259 QEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 318
IA+ SY I+ E + EL W K + GIT+GASTPD
Sbjct: 221 LSIAKQHCKDSYLIEDENEL-------------ELA----WF-KDKKLCGITAGASTPDW 262
Query: 319 AVEDVLKKVFEI 330
+E+V +K+ I
Sbjct: 263 IIENVKQKISTI 274
>gi|161582020|ref|NP_230334.2| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
O1 biovar El Tor str. N16961]
gi|255743856|ref|ZP_05417812.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholera
CIRS 101]
gi|262156075|ref|ZP_06029194.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
INDRE 91/1]
gi|379740543|ref|YP_005332512.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
IEC224]
gi|417812733|ref|ZP_12459392.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-49A2]
gi|417815600|ref|ZP_12462233.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HCUF01]
gi|418331735|ref|ZP_12942676.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-06A1]
gi|418336155|ref|ZP_12945056.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-23A1]
gi|418342992|ref|ZP_12949787.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-28A1]
gi|418348159|ref|ZP_12952894.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-43A1]
gi|418354540|ref|ZP_12957262.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-61A1]
gi|419825153|ref|ZP_14348659.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
CP1033(6)]
gi|421315872|ref|ZP_15766444.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
CP1032(5)]
gi|421319541|ref|ZP_15770100.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
CP1038(11)]
gi|421323591|ref|ZP_15774119.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
CP1041(14)]
gi|421327987|ref|ZP_15778502.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
CP1042(15)]
gi|421330912|ref|ZP_15781394.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
CP1046(19)]
gi|421334581|ref|ZP_15785049.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
CP1048(21)]
gi|421338473|ref|ZP_15788909.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-20A2]
gi|421345638|ref|ZP_15796024.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-46A1]
gi|421350516|ref|ZP_15800882.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HE-25]
gi|422890794|ref|ZP_16933205.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-40A1]
gi|422901669|ref|ZP_16937032.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-48A1]
gi|422905894|ref|ZP_16940739.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-70A1]
gi|422912489|ref|ZP_16947015.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HFU-02]
gi|422921912|ref|ZP_16955117.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
BJG-01]
gi|422924972|ref|ZP_16958002.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-38A1]
gi|423144292|ref|ZP_17131906.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-19A1]
gi|423148944|ref|ZP_17136303.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-21A1]
gi|423152789|ref|ZP_17139987.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-22A1]
gi|423155594|ref|ZP_17142707.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-32A1]
gi|423159429|ref|ZP_17146401.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-33A2]
gi|423164115|ref|ZP_17150902.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-48B2]
gi|423730248|ref|ZP_17703566.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-17A1]
gi|423748669|ref|ZP_17711576.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-50A2]
gi|423891966|ref|ZP_17725653.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-62A1]
gi|423926741|ref|ZP_17730269.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-77A1]
gi|424001296|ref|ZP_17744385.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-17A2]
gi|424005452|ref|ZP_17748436.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-37A1]
gi|424023462|ref|ZP_17763126.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-62B1]
gi|424026266|ref|ZP_17765882.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-69A1]
gi|424585591|ref|ZP_18025185.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
CP1030(3)]
gi|424594286|ref|ZP_18033624.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
CP1040(13)]
gi|424598151|ref|ZP_18037349.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio Cholerae
CP1044(17)]
gi|424600905|ref|ZP_18040062.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
CP1047(20)]
gi|424605884|ref|ZP_18044849.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
CP1050(23)]
gi|424609718|ref|ZP_18048576.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-39A1]
gi|424612519|ref|ZP_18051326.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-41A1]
gi|424616342|ref|ZP_18055033.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-42A1]
gi|424621278|ref|ZP_18059806.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-47A1]
gi|424644256|ref|ZP_18082010.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-56A2]
gi|424651899|ref|ZP_18089423.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-57A2]
gi|424655848|ref|ZP_18093150.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-81A2]
gi|429887917|ref|ZP_19369422.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
PS15]
gi|440708979|ref|ZP_20889639.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
4260B]
gi|443502794|ref|ZP_21069783.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-64A1]
gi|443506707|ref|ZP_21073497.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-65A1]
gi|443510814|ref|ZP_21077478.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-67A1]
gi|443514376|ref|ZP_21080915.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-68A1]
gi|443518189|ref|ZP_21084606.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-71A1]
gi|443523056|ref|ZP_21089296.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-72A2]
gi|443530686|ref|ZP_21096702.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-7A1]
gi|443534445|ref|ZP_21100357.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-80A1]
gi|443538036|ref|ZP_21103892.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-81A1]
gi|449053996|ref|ZP_21732664.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
O1 str. Inaba G4222]
gi|20138764|sp|Q9KU44.2|ISPH_VIBCH RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|255738487|gb|EET93876.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholera
CIRS 101]
gi|262030111|gb|EEY48756.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
INDRE 91/1]
gi|340042900|gb|EGR03863.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HCUF01]
gi|340043194|gb|EGR04154.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-49A2]
gi|341624993|gb|EGS50466.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-70A1]
gi|341626164|gb|EGS51570.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-48A1]
gi|341626643|gb|EGS52006.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-40A1]
gi|341640665|gb|EGS65246.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HFU-02]
gi|341647457|gb|EGS71536.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
BJG-01]
gi|341648329|gb|EGS72393.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-38A1]
gi|356420458|gb|EHH73984.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-06A1]
gi|356421172|gb|EHH74677.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-21A1]
gi|356425995|gb|EHH79334.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-19A1]
gi|356433678|gb|EHH86865.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-23A1]
gi|356434189|gb|EHH87371.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-22A1]
gi|356437719|gb|EHH90805.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-28A1]
gi|356442763|gb|EHH95598.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-32A1]
gi|356447737|gb|EHI00525.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-43A1]
gi|356449985|gb|EHI02721.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-33A2]
gi|356453794|gb|EHI06454.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-61A1]
gi|356456252|gb|EHI08861.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-48B2]
gi|378794053|gb|AFC57524.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
IEC224]
gi|395922613|gb|EJH33429.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
CP1032(5)]
gi|395922806|gb|EJH33621.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
CP1041(14)]
gi|395925866|gb|EJH36663.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
CP1038(11)]
gi|395930572|gb|EJH41319.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
CP1042(15)]
gi|395934765|gb|EJH45503.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
CP1046(19)]
gi|395937374|gb|EJH48093.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
CP1048(21)]
gi|395944909|gb|EJH55581.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-20A2]
gi|395948583|gb|EJH59228.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-46A1]
gi|395954638|gb|EJH65248.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HE-25]
gi|395962386|gb|EJH72685.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-56A2]
gi|395963579|gb|EJH73842.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-57A2]
gi|395966400|gb|EJH76525.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-42A1]
gi|395974574|gb|EJH84099.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-47A1]
gi|395977437|gb|EJH86847.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
CP1030(3)]
gi|395979125|gb|EJH88489.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
CP1047(20)]
gi|408009444|gb|EKG47350.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-39A1]
gi|408016215|gb|EKG53769.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-41A1]
gi|408036881|gb|EKG73297.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
CP1040(13)]
gi|408044592|gb|EKG80498.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio Cholerae
CP1044(17)]
gi|408046301|gb|EKG82001.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
CP1050(23)]
gi|408056887|gb|EKG91758.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-81A2]
gi|408611424|gb|EKK84785.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
CP1033(6)]
gi|408627101|gb|EKK99926.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-17A1]
gi|408640510|gb|EKL12300.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-50A2]
gi|408658127|gb|EKL29199.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-77A1]
gi|408659156|gb|EKL30211.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-62A1]
gi|408848174|gb|EKL88227.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-37A1]
gi|408849115|gb|EKL89148.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-17A2]
gi|408873235|gb|EKM12437.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-62B1]
gi|408881179|gb|EKM20089.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-69A1]
gi|429225085|gb|EKY31371.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
PS15]
gi|439975720|gb|ELP51832.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
4260B]
gi|443432914|gb|ELS75435.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-64A1]
gi|443436738|gb|ELS82855.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-65A1]
gi|443440301|gb|ELS89990.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-67A1]
gi|443444396|gb|ELS97670.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-68A1]
gi|443448231|gb|ELT04866.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-71A1]
gi|443451006|gb|ELT11270.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-72A2]
gi|443458887|gb|ELT26282.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-7A1]
gi|443462449|gb|ELT33488.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-80A1]
gi|443466469|gb|ELT41127.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-81A1]
gi|448266521|gb|EMB03748.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
O1 str. Inaba G4222]
Length = 316
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 143/318 (44%), Gaps = 67/318 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L++ + + ++ + V ++V+ A G +
Sbjct: 33 IYVRHEVVHNRFVVEGLKQRGARFV------EELNEVPDDNIVIFSAHGVSQAVRQEAKE 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++ + D TCP V+KV V + + ++ G H E T G+Y
Sbjct: 87 RSLTVFDATCPLVTKVHMEVARASRKHMEVVLIGHAGHPEVEGTM---GQY--------- 134
Query: 137 EYVCDYILGGELNGSSSTKEAFL-EKFKKAVS---KGFDPDVDLVKVGIANQTTMLKGET 192
+S T +L EK + VS K DP + +QTT+ ET
Sbjct: 135 --------------ASDTGGMYLVEKPEDVVSLQAKVKDPS----NLHYVSQTTLSVDET 176
Query: 193 EEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNS 252
++ + + + G + IC ATQ RQDA+ +++ E+VD+++VVG NS
Sbjct: 177 ADVIDELRRVFPKIQGPRK--------DDICYATQNRQDAV-RILAEQVDVMVVVGSKNS 227
Query: 253 SNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSG 312
SN++ L+E+AE G P Y ID + I P W Q+ IG+T+G
Sbjct: 228 SNSTRLKELAEKLGTPGYLIDCPQDIDP-----------------EWFVDAQL-IGVTAG 269
Query: 313 ASTPDKAVEDVLKKVFEI 330
AS P++ V +L ++ E+
Sbjct: 270 ASAPEELVNQILDRIKEL 287
>gi|451820111|ref|YP_007456312.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase IspH
[Clostridium saccharoperbutylacetonicum N1-4(HMT)]
gi|451786090|gb|AGF57058.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase IspH
[Clostridium saccharoperbutylacetonicum N1-4(HMT)]
Length = 634
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 152/322 (47%), Gaps = 73/322 (22%)
Query: 5 AYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAF 64
A +K++ +KI+ +IHN V K LE + +I EE D ++ GDV+V+ +
Sbjct: 23 ALRIQKEY-NKKIYTLGPLIHNNDVVKFLENNNIYSIEFEE----VDKLSVGDVIVVRSH 77
Query: 65 GAAVEEMVT--LNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATAS 122
G V EM+ L NK +++ TCP+V+ + V+K+ K Y +I G +H E +
Sbjct: 78 G--VSEMILDYLENKQFTVINATCPFVTNIQKKVKKYSKEGYHIVILGDKNHPEVIGING 135
Query: 123 FAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIA 182
+ I+ TK+ F++ + + KV +
Sbjct: 136 WCNNKAII-----------------------TKDG---TFEEQIPQ---------KVCLV 160
Query: 183 NQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVD 242
+QTT E K E T++ V+ ++FNTIC AT+ RQ + ++ +E D
Sbjct: 161 SQTT-------EKMKNWENTLVNLSRVK----ELLAFNTICSATEVRQKSTNQISKE-AD 208
Query: 243 LILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPK 302
++V+GG NSSNT+ L +IA+D I + I++ K + ++++ K
Sbjct: 209 AMIVIGGKNSSNTTKLYQIAKDNCINTIHIENFKEL-----------------PKDFINK 251
Query: 303 GQITIGITSGASTPDKAVEDVL 324
IG+T+GASTPD + +VL
Sbjct: 252 NIKKIGVTAGASTPDWIIREVL 273
>gi|385799694|ref|YP_005836098.1| hydroxymethylbutenyl pyrophosphate reductase [Halanaerobium
praevalens DSM 2228]
gi|309389058|gb|ADO76938.1| hydroxymethylbutenyl pyrophosphate reductase [Halanaerobium
praevalens DSM 2228]
Length = 721
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 143/333 (42%), Gaps = 75/333 (22%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+ EA K+ ++ +IHNP V +RLE+ +N+ V + D +V++ +
Sbjct: 24 MVLEAAKKNDALNVYTLGPLIHNPQVVERLEK---KNVKVASSLAEID----SGIVIIRS 76
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
G A E + K ++++D TCP+V ++ Y + I+G H E
Sbjct: 77 HGVAPEVLAKARAKKLKVIDATCPYVKNAQKYAKRLVDEGYQTFIYGDEDHPEV------ 130
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFL---EKFKKAVSKGFDPDVDLVKVG 180
G Y G+S K + + E K K KVG
Sbjct: 131 QGIY----------------------GASDKKASIIGEKEDLKSIELKA--------KVG 160
Query: 181 IANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEK 240
+ QTT EI L+ T +++ V FNTIC+ T RQ + K+ E+
Sbjct: 161 LVAQTTKSPESFREIIDLI-ATKVKELKV---------FNTICNTTDVRQSSAKKLAED- 209
Query: 241 VDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWL 300
VD++ V+GG NS+NT+ L EI P+Y I++ I K+ WL
Sbjct: 210 VDIMFVIGGHNSANTTRLAEICTVTNTPTYHIETAAEI-----------------KKEWL 252
Query: 301 PKGQITIGITSGASTPDKAVEDVLKKVFEIKRE 333
+ +GIT+GASTPD + +V++ + E +E
Sbjct: 253 SEKN-KVGITAGASTPDWLIREVVQLMNEENKE 284
>gi|121587771|ref|ZP_01677531.1| hydroxymethylbutenyl pyrophosphate reductase [Vibrio cholerae
2740-80]
gi|153818721|ref|ZP_01971388.1| hydroxymethylbutenyl pyrophosphate reductase [Vibrio cholerae NCTC
8457]
gi|153823999|ref|ZP_01976666.1| hydroxymethylbutenyl pyrophosphate reductase [Vibrio cholerae B33]
gi|153829359|ref|ZP_01982026.1| hydroxymethylbutenyl pyrophosphate reductase [Vibrio cholerae
623-39]
gi|227080866|ref|YP_002809417.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
M66-2]
gi|229505694|ref|ZP_04395204.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
BX 330286]
gi|229508732|ref|ZP_04398225.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
B33]
gi|229519518|ref|ZP_04408961.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
RC9]
gi|229608713|ref|YP_002879361.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
MJ-1236]
gi|254291963|ref|ZP_04962743.1| hydroxymethylbutenyl pyrophosphate reductase [Vibrio cholerae
AM-19226]
gi|254851017|ref|ZP_05240367.1| hydroxymethylbutenyl pyrophosphate reductase [Vibrio cholerae MO10]
gi|297580809|ref|ZP_06942735.1| penicillin tolerance protein LytB [Vibrio cholerae RC385]
gi|298500799|ref|ZP_07010602.1| LytB protein [Vibrio cholerae MAK 757]
gi|360034595|ref|YP_004936358.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
O1 str. 2010EL-1786]
gi|9655124|gb|AAF93850.1| lytB protein [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121547998|gb|EAX58078.1| hydroxymethylbutenyl pyrophosphate reductase [Vibrio cholerae
2740-80]
gi|126510743|gb|EAZ73337.1| hydroxymethylbutenyl pyrophosphate reductase [Vibrio cholerae NCTC
8457]
gi|126518480|gb|EAZ75703.1| hydroxymethylbutenyl pyrophosphate reductase [Vibrio cholerae B33]
gi|148875142|gb|EDL73277.1| hydroxymethylbutenyl pyrophosphate reductase [Vibrio cholerae
623-39]
gi|150422102|gb|EDN14069.1| hydroxymethylbutenyl pyrophosphate reductase [Vibrio cholerae
AM-19226]
gi|227008754|gb|ACP04966.1| lytB protein [Vibrio cholerae M66-2]
gi|229344207|gb|EEO09182.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
RC9]
gi|229354256|gb|EEO19186.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
B33]
gi|229357917|gb|EEO22834.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
BX 330286]
gi|229371368|gb|ACQ61791.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
MJ-1236]
gi|254846722|gb|EET25136.1| hydroxymethylbutenyl pyrophosphate reductase [Vibrio cholerae MO10]
gi|297535225|gb|EFH74060.1| penicillin tolerance protein LytB [Vibrio cholerae RC385]
gi|297540580|gb|EFH76638.1| LytB protein [Vibrio cholerae MAK 757]
gi|356645749|gb|AET25804.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
O1 str. 2010EL-1786]
Length = 320
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 143/318 (44%), Gaps = 67/318 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L++ + + ++ + V ++V+ A G +
Sbjct: 37 IYVRHEVVHNRFVVEGLKQRGARFV------EELNEVPDDNIVIFSAHGVSQAVRQEAKE 90
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++ + D TCP V+KV V + + ++ G H E T G+Y
Sbjct: 91 RSLTVFDATCPLVTKVHMEVARASRKHMEVVLIGHAGHPEVEGTM---GQY--------- 138
Query: 137 EYVCDYILGGELNGSSSTKEAFL-EKFKKAVS---KGFDPDVDLVKVGIANQTTMLKGET 192
+S T +L EK + VS K DP + +QTT+ ET
Sbjct: 139 --------------ASDTGGMYLVEKPEDVVSLQAKVKDPS----NLHYVSQTTLSVDET 180
Query: 193 EEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNS 252
++ + + + G + IC ATQ RQDA+ +++ E+VD+++VVG NS
Sbjct: 181 ADVIDELRRVFPKIQGPRK--------DDICYATQNRQDAV-RILAEQVDVMVVVGSKNS 231
Query: 253 SNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSG 312
SN++ L+E+AE G P Y ID + I P W Q+ IG+T+G
Sbjct: 232 SNSTRLKELAEKLGTPGYLIDCPQDIDP-----------------EWFVDAQL-IGVTAG 273
Query: 313 ASTPDKAVEDVLKKVFEI 330
AS P++ V +L ++ E+
Sbjct: 274 ASAPEELVNQILDRIKEL 291
>gi|315443130|ref|YP_004076009.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
gilvum Spyr1]
gi|315261433|gb|ADT98174.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
gilvum Spyr1]
Length = 333
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 138/318 (43%), Gaps = 73/318 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V L + + +Q D V +G +VV A G A V
Sbjct: 55 IYVRHEIVHNRYVVDTLAKAGAIFV------EQTDEVPEGAIVVFSAHGVAPTVHVEAAA 108
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+N+Q +D TCP V+KV ++ + DY ++ G HEE V TA A ++ V + +A
Sbjct: 109 RNLQTIDATCPLVTKVHNEAKRFARDDYDILLVGHEGHEEVVGTAGEAPDHVQVVDNPDA 168
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
D ++ + N KV +QTT+ ET E
Sbjct: 169 ---VDNVVVRDPN----------------------------KVIWLSQTTLSVDETMET- 196
Query: 197 KLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGGWN 251
V + E F + + IC ATQ RQ A+ M E +L++VVG N
Sbjct: 197 ------------VRRLREKFPTLQDPPSDDICYATQNRQVAVKAMAPE-CELVIVVGSKN 243
Query: 252 SSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITS 311
SSN+ L E+A +G G+ A+ + + E + WL G T+G+TS
Sbjct: 244 SSNSVRLVEVA---------------LGAGSHAAHLVDYAEDTDPA-WL-DGVTTVGVTS 286
Query: 312 GASTPDKAVEDVLKKVFE 329
GAS P+ V VL ++ E
Sbjct: 287 GASVPEILVRGVLDRLAE 304
>gi|422322166|ref|ZP_16403208.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Achromobacter
xylosoxidans C54]
gi|317402958|gb|EFV83498.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Achromobacter
xylosoxidans C54]
Length = 327
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 139/316 (43%), Gaps = 68/316 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V + L I + D G +VV A G +
Sbjct: 44 IYVRHEIVHNRYVVEDLRAKGAIFI------DELDDAPTGAIVVFSAHGVSKAVRAEAEA 97
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA--GKYIIVKNMK 134
+ Q+ D TCP V+KV V + + I+ G H E T A G Y++
Sbjct: 98 RGQQVFDATCPLVTKVHIEVARMRAAGREIIMIGHKGHPEVEGTLGQAQGGMYLV----- 152
Query: 135 EAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEE 194
E V D + G ++N DP+ + QTT+ + +
Sbjct: 153 --ETVED-VAGLQVN---------------------DPE----NLAYVTQTTL----SVD 180
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
V K + +F ++ E S IC ATQ RQDA+ K++ + DL+LVVG NSSN
Sbjct: 181 DAAAVSKALKARF--PSIVEPKKS--DICYATQNRQDAV-KVLAPECDLVLVVGSPNSSN 235
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
++ L+E+A+ +G+ SY ID I P WL +G+ IG+T+GAS
Sbjct: 236 SNRLREVADRKGVASYLIDGAHSIDPA-----------------WL-EGRKRIGVTAGAS 277
Query: 315 TPDKAVEDVLKKVFEI 330
P+ V+ V+ +V E+
Sbjct: 278 APEILVQQVIARVKEL 293
>gi|419829303|ref|ZP_14352791.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-1A2]
gi|419832105|ref|ZP_14355570.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-61A2]
gi|422916476|ref|ZP_16950814.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-02A1]
gi|423817386|ref|ZP_17715417.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-55C2]
gi|423849423|ref|ZP_17719205.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-59A1]
gi|423879076|ref|ZP_17722811.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-60A1]
gi|423996898|ref|ZP_17740161.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-02C1]
gi|424015601|ref|ZP_17755448.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-55B2]
gi|424020711|ref|ZP_17760491.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-59B1]
gi|424624081|ref|ZP_18062558.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-50A1]
gi|424628577|ref|ZP_18066882.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-51A1]
gi|424632611|ref|ZP_18070727.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-52A1]
gi|424635698|ref|ZP_18073719.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-55A1]
gi|424639613|ref|ZP_18077509.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-56A1]
gi|424647696|ref|ZP_18085372.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-57A1]
gi|443528597|ref|ZP_21094631.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-78A1]
gi|341640109|gb|EGS64704.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-02A1]
gi|408015623|gb|EKG53203.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-50A1]
gi|408020813|gb|EKG58100.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-52A1]
gi|408026815|gb|EKG63810.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-56A1]
gi|408027249|gb|EKG64231.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-55A1]
gi|408036601|gb|EKG73025.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-57A1]
gi|408058620|gb|EKG93410.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-51A1]
gi|408621937|gb|EKK94929.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-1A2]
gi|408636609|gb|EKL08746.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-55C2]
gi|408643784|gb|EKL15501.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-60A1]
gi|408644822|gb|EKL16496.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-59A1]
gi|408652006|gb|EKL23245.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-61A2]
gi|408854276|gb|EKL94040.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-02C1]
gi|408861870|gb|EKM01437.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-55B2]
gi|408866576|gb|EKM05956.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-59B1]
gi|443453171|gb|ELT17004.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HC-78A1]
Length = 316
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 143/318 (44%), Gaps = 67/318 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L++ + + ++ + V +V+ A G +
Sbjct: 33 IYVRHEVVHNRFVVEGLKQRGARFV------EELNEVPDDSIVIFSAHGVSQAVRQEAKE 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++ + D TCP V+KV V + + ++ G H E T G+Y
Sbjct: 87 RSLTVFDATCPLVTKVHMEVARASRKHMEVVLIGHAGHPEVEGTM---GQY--------- 134
Query: 137 EYVCDYILGGELNGSSSTKEAFL-EKFKKAVS---KGFDPDVDLVKVGIANQTTMLKGET 192
+S T +L EK + VS K DP + +QTT+ ET
Sbjct: 135 --------------ASDTGGMYLVEKPEDVVSLQAKVKDPS----NLHYVSQTTLSVDET 176
Query: 193 EEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNS 252
++ + + + G + IC ATQ RQDA+ +++ E+VD+++VVG NS
Sbjct: 177 ADVIDELRRVFPKIQGPRK--------DDICYATQNRQDAV-RILAEQVDVMVVVGSKNS 227
Query: 253 SNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSG 312
SN++ L+E+AE G P Y ID + I P W Q+ IG+T+G
Sbjct: 228 SNSTRLKELAEKLGTPGYLIDCPQDIDP-----------------EWFVDAQL-IGVTAG 269
Query: 313 ASTPDKAVEDVLKKVFEI 330
AS P++ V +L+++ E+
Sbjct: 270 ASAPEELVNQILERIKEL 287
>gi|15839007|ref|NP_299695.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Xylella
fastidiosa 9a5c]
gi|28199316|ref|NP_779630.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Xylella
fastidiosa Temecula1]
gi|182682041|ref|YP_001830201.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Xylella
fastidiosa M23]
gi|386083363|ref|YP_005999645.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Xylella
fastidiosa subsp. fastidiosa GB514]
gi|417557967|ref|ZP_12208965.1| Penicillin tolerance protein [Xylella fastidiosa EB92.1]
gi|54037482|sp|P65194.1|ISPH_XYLFT RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|54041397|sp|P65193.1|ISPH_XYLFA RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|238691065|sp|B2I6V0.1|ISPH_XYLF2 RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|9107602|gb|AAF85215.1|AE004050_8 drug tolerance protein [Xylella fastidiosa 9a5c]
gi|28057422|gb|AAO29279.1| drug tolerance protein [Xylella fastidiosa Temecula1]
gi|71729058|gb|EAO31185.1| LytB protein [Xylella fastidiosa Ann-1]
gi|182632151|gb|ACB92927.1| hydroxymethylbutenyl pyrophosphate reductase [Xylella fastidiosa
M23]
gi|307578310|gb|ADN62279.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Xylella
fastidiosa subsp. fastidiosa GB514]
gi|338179364|gb|EGO82312.1| Penicillin tolerance protein [Xylella fastidiosa EB92.1]
Length = 316
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 136/320 (42%), Gaps = 71/320 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L++ I VEE + V G V+ A G +
Sbjct: 33 IYVRHEVVHNRFVVDDLKQRGA--IFVEELHQ----VPDGATVIFSAHGVSQAVRRQAAQ 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATAS------FAGKYIIV 130
+ +++ D TCP V+KV V +H + I+ G H E T G+ +V
Sbjct: 87 RGLKVFDATCPLVTKVHLDVARHCRTGRDMILIGHAGHPEVEGTMGQWDQERGTGRIYLV 146
Query: 131 KNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKG 190
+N+ + L+ + A+ QTT+
Sbjct: 147 ENIDDV---------ATLHVAQPHHLAY-----------------------TTQTTLSVD 174
Query: 191 ETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGW 250
+T I + + G +N N IC ATQ RQDA+ ++ E DL+LVVG
Sbjct: 175 DTRNIIDALRQRFPTIQGPKN--------NDICYATQNRQDAVRELARE-CDLVLVVGSP 225
Query: 251 NSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGIT 310
NSSN++ L E+A+ G+ SY IDS I P +++K + IG+T
Sbjct: 226 NSSNSNRLSELAQREGVASYLIDSAAEIDP----------AWVIDKHH--------IGVT 267
Query: 311 SGASTPDKAVEDVLKKVFEI 330
+GAS P V+ VL +++E+
Sbjct: 268 AGASAPQVLVDGVLARLYEL 287
>gi|381205128|ref|ZP_09912199.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [SAR324 cluster
bacterium JCVI-SC AAA005]
Length = 314
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 154/315 (48%), Gaps = 66/315 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V +RL+ V I VEE K+ + KG + A G +
Sbjct: 38 VYVRHEIVHNRQVVERLQAQGV--IFVEEIKE----IPKGSHAIFSAHGVSPVVRQQARE 91
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAG-KYIIVKNMKE 135
+++++VD TCP V+KV +++++ ++T ++ G H E T A + I+++ +++
Sbjct: 92 QSLEMVDATCPLVTKVHGEAQRYRRKNFTILLIGHAEHVEVQGTMGEAPERMIVIETIQD 151
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
AE V + S + A+L QTT+ +T EI
Sbjct: 152 AEKV---------QLTDSNQIAYL-----------------------TQTTLSLDDTFEI 179
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
K+++K R G+E + + IC ATQ RQ+A+ K + +V+ ILVVG NSSNT
Sbjct: 180 IKILKK---RFPGIEGPPK-----DDICYATQNRQNAV-KELASQVERILVVGASNSSNT 230
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
L E+A+ +G + ++ +I + VE+ + +IGIT+GAS
Sbjct: 231 LRLVEVAKAQGTEARRVEEASQIEKTD-----------VERVD-------SIGITAGASA 272
Query: 316 PDKAVEDVLKKVFEI 330
P+ V+ ++ K+ E+
Sbjct: 273 PEDVVQSIVAKLCEL 287
>gi|404371213|ref|ZP_10976521.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium sp.
7_2_43FAA]
gi|226912661|gb|EEH97862.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium sp.
7_2_43FAA]
Length = 635
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 154/321 (47%), Gaps = 69/321 (21%)
Query: 5 AYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAF 64
A + +KQ+ ++KI+ +IHN V + LE+ + +I E D + KGDV+V+ +
Sbjct: 23 ALKVKKQY-DKKIYTLGPLIHNNDVVRYLEKNDIYSIDFSE----IDKLEKGDVIVIRSH 77
Query: 65 GAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA 124
G + + TL K + +V+ TCP+V+ + V K+ Y +I G H E + +
Sbjct: 78 GVTKKVVNTLEEKGLVVVNATCPYVTNIHKKVNKYSDLGYNIVILGDDKHPEVIGINGWC 137
Query: 125 GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEA-FLEKFKKAVSKGFDPDVDLVKVGIAN 183
I+ TK+ F E+ K K+ + +
Sbjct: 138 NDSAII-----------------------TKDGTFEEELPK-------------KICVVS 161
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTT E EE K KT+ + + ++ ++FNTIC AT+ RQ + ++ + VD
Sbjct: 162 QTT----EKEETWK---KTLN---NLSSNSKELLAFNTICSATEVRQKSANEL-SQNVDT 210
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG NSSNT+ L +IA+ + +++ K + E +E+ KG
Sbjct: 211 MIVIGGRNSSNTTKLYQIAKANCPNTIHVENAKE-----------LTKEFIEEN----KG 255
Query: 304 QITIGITSGASTPDKAVEDVL 324
++ +G+T+GASTPD +++V+
Sbjct: 256 KV-VGVTAGASTPDWIIKEVI 275
>gi|421499023|ref|ZP_15946090.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Aeromonas media
WS]
gi|407182063|gb|EKE56053.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Aeromonas media
WS]
Length = 311
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 150/321 (46%), Gaps = 75/321 (23%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAA--VEEMVTL 74
I++ +E++HN V +L++ + VEE D V +V+ A G A V EM
Sbjct: 33 IYVRHEVVHNRYVVNKLKDAGA--VFVEE----LDEVPDDSIVIFSAHGVAKTVREMA-- 84
Query: 75 NNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMK 134
++ +++ D TCP V+KV V + + +++ G H E + T G+Y +N +
Sbjct: 85 KSRALKVFDATCPLVTKVHMEVHRASRKGSEAVLIGHAGHPEVIGTM---GQY---ENRE 138
Query: 135 EAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEE 194
Y+ + + ++ K K +PD DL V QTT+ ET +
Sbjct: 139 GGMYLVE-----------TPEDVAKLKVK-------NPD-DLCFV---TQTTLSMDETSD 176
Query: 195 IGKLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGG 249
+ ++ + +HF + IC ATQ RQDA+ +M VD +LVVG
Sbjct: 177 V-------------IDALRQHFPKIQGPRKDDICYATQNRQDAVREMAG-LVDAMLVVGS 222
Query: 250 WNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGI 309
NSSN++ L+E+AE G +Y ID I + +WL +G IG+
Sbjct: 223 RNSSNSNRLRELAEKVGARAYLIDDASMI-----------------EASWL-EGVERIGV 264
Query: 310 TSGASTPDKAVEDVLKKVFEI 330
T+GAS P+ V++V+ ++ E+
Sbjct: 265 TAGASAPEVLVQNVIARLREL 285
>gi|68165322|gb|AAY87621.1| LytB [Vibrio cholerae]
gi|68165324|gb|AAY87622.1| LytB [Vibrio cholerae]
gi|68165326|gb|AAY87623.1| LytB [Vibrio cholerae]
gi|68165338|gb|AAY87629.1| LytB [Vibrio cholerae]
gi|68165340|gb|AAY87630.1| LytB [Vibrio cholerae]
gi|68165342|gb|AAY87631.1| LytB [Vibrio cholerae]
gi|68165344|gb|AAY87632.1| LytB [Vibrio cholerae]
gi|68165346|gb|AAY87633.1| LytB [Vibrio cholerae]
gi|68165348|gb|AAY87634.1| LytB [Vibrio cholerae]
Length = 280
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 143/318 (44%), Gaps = 67/318 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L++ + + ++ + V ++V+ A G +
Sbjct: 25 IYVRHEVVHNRFVVEGLKQRGARFV------EELNEVPDDNIVIFSAHGVSQAVRQEAKE 78
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++ + D TCP V+KV V + + ++ G H E T G+Y
Sbjct: 79 RSLTVFDATCPLVTKVHMEVARASRKHMEVVLIGHAGHPEVEGTM---GQY--------- 126
Query: 137 EYVCDYILGGELNGSSSTKEAFL-EKFKKAVS---KGFDPDVDLVKVGIANQTTMLKGET 192
+S T +L EK + VS K DP + +QTT+ ET
Sbjct: 127 --------------ASDTGGMYLVEKPEDVVSLQAKVKDPS----NLHYVSQTTLSVDET 168
Query: 193 EEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNS 252
++ + + + G + IC ATQ RQDA+ +++ E+VD+++VVG NS
Sbjct: 169 ADVIDELRRVFPKIQGPRK--------DDICYATQNRQDAV-RILAEQVDVMVVVGSKNS 219
Query: 253 SNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSG 312
SN++ L+E+AE G P Y ID + I P W Q+ IG+T+G
Sbjct: 220 SNSTRLKELAEKLGTPGYLIDCPQDIDP-----------------EWFVDAQL-IGVTAG 261
Query: 313 ASTPDKAVEDVLKKVFEI 330
AS P++ V +L ++ E+
Sbjct: 262 ASAPEELVNQILDRIKEL 279
>gi|46578472|ref|YP_009280.1| hydroxymethylbutenyl pyrophosphate reductase [Desulfovibrio
vulgaris str. Hildenborough]
gi|387151956|ref|YP_005700892.1| hydroxymethylbutenyl pyrophosphate reductase [Desulfovibrio
vulgaris RCH1]
gi|50400897|sp|Q72G08.1|ISPH_DESVH RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|46447883|gb|AAS94539.1| hydroxymethylbutenyl pyrophosphate reductase [Desulfovibrio
vulgaris str. Hildenborough]
gi|311232400|gb|ADP85254.1| hydroxymethylbutenyl pyrophosphate reductase [Desulfovibrio
vulgaris RCH1]
Length = 290
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 136/317 (42%), Gaps = 66/317 (20%)
Query: 13 PEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMV 72
P +I IIHNP V + M V+ + +Q D V GD VV+ A G ++
Sbjct: 38 PRCRIATFGPIIHNPQVLEAYAGMGVRCL------RQVDEVEAGDHVVIRAHGVPQQQEK 91
Query: 73 TLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKN 132
L +++ +VD TCP V K +E+ + T ++ G+ H E S+AG+ +V
Sbjct: 92 ALRSRDAVVVDATCPKVKKAQLGIEEQCRAGRTLLLFGEAEHPEVRGLLSYAGEGALVFG 151
Query: 133 MKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGET 192
+ EL G E E F +A QTT +
Sbjct: 152 SVD-----------ELEGLPLQPET--EYF------------------LAAQTTQDR--- 177
Query: 193 EEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNS 252
V + R + E + TICDAT+ RQ + KVD ++VVGG++S
Sbjct: 178 ------VAFEVARAWLHERLGHEVPVLETICDATRLRQQEAID-IARKVDAMVVVGGFDS 230
Query: 253 SNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSG 312
NT L ++A +G+ + +++E ++ P ++ +G IG+T+G
Sbjct: 231 GNTRRLADVAAAQGVFTVHVENESQL-PVEQL-----------------RGCGIIGLTAG 272
Query: 313 ASTPDKAVEDVLKKVFE 329
ASTP K++ D ++ E
Sbjct: 273 ASTP-KSIIDATQRFLE 288
>gi|297569033|ref|YP_003690377.1| hydroxymethylbutenyl pyrophosphate reductase [Desulfurivibrio
alkaliphilus AHT2]
gi|296924948|gb|ADH85758.1| hydroxymethylbutenyl pyrophosphate reductase [Desulfurivibrio
alkaliphilus AHT2]
Length = 279
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 125/301 (41%), Gaps = 83/301 (27%)
Query: 23 IIHNPTVNKRLEEMAV---QNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNV 79
+IHNP V + LEE V + +P + VV+ A G E L V
Sbjct: 39 LIHNPQVLEMLEEKGVKVLEEVPA----------DTTGTVVIRAHGVPPERKHRLEASGV 88
Query: 80 QIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIV----KNMKE 135
+ D TCP V KV ++K++K YT++I G H E AG +V ++ E
Sbjct: 89 VVEDATCPRVVKVQAIIDKYQKEGYTTVIVGDRDHAEVEGLMGHAGAAGLVVSRLTDLDE 148
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
+ YI + +QTT + EE+
Sbjct: 149 LQLAPPYI-------------------------------------VVSQTT----QDEEL 167
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
+ + ++++F V FNTICD+T +RQD + +M E +D ++VVGG NS+NT
Sbjct: 168 FREITDEILKRFPGGKV------FNTICDSTHKRQDEVREMCRE-IDALVVVGGRNSANT 220
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
L EIA P + +++E + P K H +G+T+GAST
Sbjct: 221 KRLAEIAHGLNCPVFLVETEDELEPDK---LKKFH---------------CVGVTAGAST 262
Query: 316 P 316
P
Sbjct: 263 P 263
>gi|404423699|ref|ZP_11005331.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
fortuitum subsp. fortuitum DSM 46621]
gi|403653454|gb|EJZ08435.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
fortuitum subsp. fortuitum DSM 46621]
Length = 337
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 143/318 (44%), Gaps = 73/318 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V + L + + + D V +G +VV A G A T
Sbjct: 59 VYVRHEIVHNKHVVETLAKAGAVFV------DETDEVPEGAIVVFSAHGVAPTVHETAAA 112
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++Q++D TCP V+KV ++ + DY ++ G HEE V TA A ++ V + +A
Sbjct: 113 RSLQVIDATCPLVTKVHNEAKRFARDDYDILLIGHEGHEEVVGTAGEAPDHVQVVDNPDA 172
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
K + DP+ KV +QTT+ ET E
Sbjct: 173 -------------------------VDKVTVR--DPN----KVIWLSQTTLSVDETMET- 200
Query: 197 KLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGGWN 251
V + E F + + IC ATQ RQ A+ M E +L++VVG N
Sbjct: 201 ------------VRRLREKFPTLQDPPSDDICYATQNRQVAVKAMAPE-CELVIVVGSRN 247
Query: 252 SSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITS 311
SSN+ L E+A +G G++ ++ + + E ++ WL +G T+G+TS
Sbjct: 248 SSNSVRLVEVA---------------LGAGSQASHLVDYAEDIDPA-WL-EGVTTVGVTS 290
Query: 312 GASTPDKAVEDVLKKVFE 329
GAS P+ V VL+++ E
Sbjct: 291 GASVPEVLVRGVLERLAE 308
>gi|420408513|ref|ZP_14907671.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori NQ4216]
gi|420409838|ref|ZP_14908983.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori NQ4200]
gi|420411883|ref|ZP_14911013.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori NQ4228]
gi|420413632|ref|ZP_14912755.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori NQ4099]
gi|420416765|ref|ZP_14915873.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori NQ4044]
gi|420418060|ref|ZP_14917153.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori NQ4076]
gi|420419549|ref|ZP_14918637.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori NQ4161]
gi|420422692|ref|ZP_14921769.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori NQ4110]
gi|420423435|ref|ZP_14922507.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp A-4]
gi|420430232|ref|ZP_14929262.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp A-20]
gi|420448790|ref|ZP_14947669.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-44]
gi|420451739|ref|ZP_14950590.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp A-6]
gi|420456783|ref|ZP_14955603.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp A-16]
gi|420461782|ref|ZP_14960570.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-3]
gi|420463525|ref|ZP_14962303.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-4]
gi|420467077|ref|ZP_14965833.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-9]
gi|420468596|ref|ZP_14967337.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-10]
gi|420470302|ref|ZP_14969012.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-11]
gi|420488718|ref|ZP_14987317.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-11]
gi|420499163|ref|ZP_14997719.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-26]
gi|420504090|ref|ZP_15002619.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-62]
gi|420522884|ref|ZP_15021307.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-11b]
gi|420531263|ref|ZP_15029637.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-28b]
gi|421721338|ref|ZP_16160614.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori R055a]
gi|393025273|gb|EJB26381.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori NQ4216]
gi|393028161|gb|EJB29248.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori NQ4099]
gi|393028843|gb|EJB29928.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori NQ4228]
gi|393028971|gb|EJB30053.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori NQ4200]
gi|393034258|gb|EJB35317.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori NQ4076]
gi|393035956|gb|EJB36998.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori NQ4044]
gi|393036626|gb|EJB37665.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori NQ4110]
gi|393038915|gb|EJB39947.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori NQ4161]
gi|393041905|gb|EJB42918.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp A-4]
gi|393048851|gb|EJB49818.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp A-20]
gi|393064849|gb|EJB65680.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-44]
gi|393070097|gb|EJB70888.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp A-6]
gi|393074815|gb|EJB75573.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp A-16]
gi|393080339|gb|EJB81066.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-3]
gi|393081053|gb|EJB81778.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-4]
gi|393084237|gb|EJB84931.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-9]
gi|393086427|gb|EJB87104.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-11]
gi|393087706|gb|EJB88363.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-10]
gi|393108194|gb|EJC08729.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-11]
gi|393129301|gb|EJC29736.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-11b]
gi|393137486|gb|EJC37870.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-28b]
gi|393151365|gb|EJC51668.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-26]
gi|393154922|gb|EJC55200.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-62]
gi|407225099|gb|EKE94872.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori R055a]
Length = 274
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 138/312 (44%), Gaps = 67/312 (21%)
Query: 19 ITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKN 78
I +IHN RLE+ N+ +EE K+ + K V++ G +++ L NK
Sbjct: 30 IFGSLIHNAKEINRLEKNF--NVKIEEDPKK---IPKNKSVIIRTHGIPKQDLEYLKNKG 84
Query: 79 VQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEY 138
V+I D TCP+V K VE K Y ++ G +H E S+A +V
Sbjct: 85 VKITDATCPYVIKPQQIVESMSKEGYQIVLFGDINHPEVKGVISYATNQALV-------- 136
Query: 139 VCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKL 198
+N +E L++ KV + +QTT ++ KL
Sbjct: 137 ---------INSLEELQEKKLQR----------------KVALVSQTT------KQTPKL 165
Query: 199 VEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHL 258
++ + + VE E I FNTIC+AT Q A + +E VD+++VVGG SSNT L
Sbjct: 166 LQ---IASYLVERCTEVRI-FNTICNATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQL 220
Query: 259 QEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 318
IA+ SY ++ E + EL W K + GIT+GASTPD
Sbjct: 221 LSIAKQHCKDSYLVEDENEL-------------ELA----WF-KDKKLCGITAGASTPDW 262
Query: 319 AVEDVLKKVFEI 330
+E+V +K+ I
Sbjct: 263 IIENVKQKISTI 274
>gi|385219280|ref|YP_005780755.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Gambia94/24]
gi|420415543|ref|ZP_14914656.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori NQ4053]
gi|420429090|ref|ZP_14928123.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp A-17]
gi|420433744|ref|ZP_14932751.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-24]
gi|420438962|ref|ZP_14937935.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-29]
gi|420441894|ref|ZP_14940838.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-36]
gi|420452986|ref|ZP_14951825.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp A-8]
gi|420472148|ref|ZP_14970843.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-18]
gi|420473944|ref|ZP_14972621.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-19]
gi|420479042|ref|ZP_14977692.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-34]
gi|420482670|ref|ZP_14981306.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-2]
gi|420483803|ref|ZP_14982432.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-3]
gi|420485945|ref|ZP_14984562.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-4]
gi|420487168|ref|ZP_14985775.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-8]
gi|420495369|ref|ZP_14993934.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-23]
gi|420507477|ref|ZP_15005988.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-24b]
gi|420509501|ref|ZP_15008002.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-24c]
gi|420513121|ref|ZP_15011603.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-2b]
gi|420514388|ref|ZP_15012860.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-3b]
gi|420516422|ref|ZP_15014884.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-4c]
gi|420518304|ref|ZP_15016756.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-4d]
gi|420521559|ref|ZP_15019988.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-8b]
gi|420533026|ref|ZP_15031388.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp M1]
gi|420534473|ref|ZP_15032823.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp M2]
gi|420536697|ref|ZP_15035038.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp M3]
gi|420538209|ref|ZP_15036538.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp M4]
gi|420539706|ref|ZP_15038024.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp M5]
gi|420540677|ref|ZP_15038987.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp M6]
gi|420542652|ref|ZP_15040948.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp M9]
gi|425432457|ref|ZP_18813020.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori GAM100Ai]
gi|317014438|gb|ADU81874.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Gambia94/24]
gi|393031448|gb|EJB32519.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori NQ4053]
gi|393044420|gb|EJB45412.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp A-17]
gi|393050732|gb|EJB51687.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-24]
gi|393055616|gb|EJB56532.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-29]
gi|393059508|gb|EJB60387.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-36]
gi|393070594|gb|EJB71383.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp A-8]
gi|393089808|gb|EJB90444.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-19]
gi|393089891|gb|EJB90526.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-18]
gi|393095872|gb|EJB96474.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-34]
gi|393098512|gb|EJB99101.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-2]
gi|393101757|gb|EJC02325.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-4]
gi|393101839|gb|EJC02406.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-3]
gi|393104055|gb|EJC04615.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-8]
gi|393113502|gb|EJC14021.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-23]
gi|393117852|gb|EJC18351.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-24b]
gi|393118897|gb|EJC19389.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-24c]
gi|393122488|gb|EJC22962.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-4d]
gi|393122863|gb|EJC23333.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-4c]
gi|393126129|gb|EJC26580.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-8b]
gi|393139291|gb|EJC39670.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp M1]
gi|393141698|gb|EJC42056.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp M2]
gi|393142696|gb|EJC43049.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp M3]
gi|393144401|gb|EJC44741.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp M4]
gi|393146602|gb|EJC46928.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp M5]
gi|393148653|gb|EJC48974.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp M6]
gi|393156536|gb|EJC56800.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-2b]
gi|393156937|gb|EJC57199.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-3b]
gi|393160222|gb|EJC60470.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp M9]
gi|410714996|gb|EKQ72432.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori GAM100Ai]
Length = 274
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 138/312 (44%), Gaps = 67/312 (21%)
Query: 19 ITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKN 78
I +IHN RLE+ N+ +EE K+ + K V++ G +++ L NK
Sbjct: 30 IFGSLIHNAKEINRLEKNF--NVKIEEDPKK---IPKNKSVIIRTHGIPKQDLEYLKNKG 84
Query: 79 VQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEY 138
V+I D TCP+V K VE K Y ++ G +H E S+A +V
Sbjct: 85 VKITDATCPYVIKPQQIVESMSKEGYQIVLFGDINHPEVKGVISYATNQALV-------- 136
Query: 139 VCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKL 198
+N +E L++ KV + +QTT ++ KL
Sbjct: 137 ---------INSLEELQEKKLQR----------------KVALVSQTT------KQTPKL 165
Query: 199 VEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHL 258
++ + + VE E I FNTIC+AT Q A + +E VD+++VVGG SSNT L
Sbjct: 166 LQ---IASYLVERCTEVRI-FNTICNATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQL 220
Query: 259 QEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 318
IA+ SY ++ E + EL W K + GIT+GASTPD
Sbjct: 221 LSIAKQHCKDSYLVEDENEL-------------ELA----WF-KDKRLCGITAGASTPDW 262
Query: 319 AVEDVLKKVFEI 330
+E+V +K+ I
Sbjct: 263 IIENVKQKISTI 274
>gi|229519959|ref|ZP_04409389.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
TM 11079-80]
gi|229343011|gb|EEO07999.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
TM 11079-80]
Length = 320
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 144/318 (45%), Gaps = 67/318 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L++ + + ++ + V ++V+ A G +
Sbjct: 37 IYVRHEVVHNRFVVEGLKQRGARFV------EELNEVPDDNIVIFSAHGVSQAVRQEAKE 90
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++ + D TCP V+KV V + + ++ G H E T G+Y
Sbjct: 91 RSLTVFDATCPLVTKVHMEVARASRKHMEVVLIGHAGHPEVEGTM---GQY--------- 138
Query: 137 EYVCDYILGGELNGSSSTKEAFL-EKFKKAVS---KGFDPDVDLVKVGIANQTTMLKGET 192
+S T +L EK + VS K DP + +QTT+ ET
Sbjct: 139 --------------ASDTGGMYLVEKPEDVVSLQAKVKDPS----NLHYVSQTTLSVDET 180
Query: 193 EEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNS 252
++ + + + G + IC ATQ RQDA+ +++ E+VD+++VVG NS
Sbjct: 181 VDVIDELRRVFPKIQGPRK--------DDICYATQNRQDAV-RILAEQVDVMVVVGSKNS 231
Query: 253 SNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSG 312
SN++ L+E+AE G P Y ID + I P W Q+ IG+T+G
Sbjct: 232 SNSTRLKELAEKLGTPGYLIDCPQDIDP-----------------EWFVAAQL-IGVTAG 273
Query: 313 ASTPDKAVEDVLKKVFEI 330
AS P++ V +L+++ E+
Sbjct: 274 ASAPEELVNQILERIKEL 291
>gi|416157809|ref|ZP_11605332.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Moraxella
catarrhalis 101P30B1]
gi|416228140|ref|ZP_11627470.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Moraxella
catarrhalis 46P47B1]
gi|326564252|gb|EGE14486.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Moraxella
catarrhalis 46P47B1]
gi|326573558|gb|EGE23521.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Moraxella
catarrhalis 101P30B1]
Length = 313
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 150/329 (45%), Gaps = 77/329 (23%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQN-IPVEEGKKQFDVVNKGDVVVLP 62
I EA ++F I++ +E++HN V +E++A + + VEE D V G +V+
Sbjct: 21 IVNEALRRF-NPPIYVRHEVVHNKFV---VEDLARRGAVFVEE----LDEVPDGAIVIFS 72
Query: 63 AFGA--AVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT 120
A G AVE+ +++ + D TCP V+KV V K KG +I+ G H E T
Sbjct: 73 AHGVSKAVED--EAKRRDLTVFDATCPLVTKVHIEVGKFAKGGMDAILIGHAGHPEVEGT 130
Query: 121 ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVG 180
G++ D GG ++ +E + F+ D L V
Sbjct: 131 M---GRF-------------DTSFGGRIH--------LVEDVEDVAKLDFERDKSLAFV- 165
Query: 181 IANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT-----ICDATQERQDAMYK 235
QTT+ +T + ++ + + F + N IC ATQ RQDA+ K
Sbjct: 166 --TQTTLSMDDTANV-------------IDALKDRFPAINAPRKDDICYATQNRQDAV-K 209
Query: 236 MVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVE 295
++ +++LVVG NSSN++ L+E+AE G +Y ID+ ++
Sbjct: 210 LLSRHCEVVLVVGSPNSSNSNRLRELAERMGRRAYLIDNAGQM----------------- 252
Query: 296 KENWLPKGQITIGITSGASTPDKAVEDVL 324
+ W +G +G+T+GAS P+ +++VL
Sbjct: 253 SQAWF-EGVTYVGVTAGASAPEILIQEVL 280
>gi|83746662|ref|ZP_00943711.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ralstonia
solanacearum UW551]
gi|207742582|ref|YP_002258974.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase protein
[Ralstonia solanacearum IPO1609]
gi|300703311|ref|YP_003744913.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ralstonia
solanacearum CFBP2957]
gi|421891054|ref|ZP_16321884.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ralstonia
solanacearum K60-1]
gi|421895432|ref|ZP_16325834.1| probable 4-hydroxy-3-methylbut-2-enyl diphosphate reductase protein
[Ralstonia solanacearum MolK2]
gi|83726615|gb|EAP73744.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ralstonia
solanacearum UW551]
gi|206586597|emb|CAQ17184.1| probable 4-hydroxy-3-methylbut-2-enyl diphosphate reductase protein
[Ralstonia solanacearum MolK2]
gi|206593976|emb|CAQ60903.1| probable 4-hydroxy-3-methylbut-2-enyl diphosphate reductase protein
[Ralstonia solanacearum IPO1609]
gi|299070974|emb|CBJ42283.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ralstonia
solanacearum CFBP2957]
gi|378963640|emb|CCF98632.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ralstonia
solanacearum K60-1]
Length = 324
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 138/311 (44%), Gaps = 64/311 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V L + ++ D V G V+ A G +
Sbjct: 49 IYVRHEIVHNAYVVSDLRSKGAVFV------QELDDVPVGGTVIFSAHGVSRAVRQAAEA 102
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V K + + ++ G H E T M +A
Sbjct: 103 RGLRVFDATCPLVTKVHVEVSKMRAQGFEIVMIGHKGHPEVEGT------------MGQA 150
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
+ D +L E +E + V K D ++ QTT+ ET+EI
Sbjct: 151 D---DGMLLVE----------SVEDVARLVVK------DPARLAYVTQTTLSVDETQEI- 190
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
V R V H IC ATQ RQDA+ K + +V++++VVG NSSN++
Sbjct: 191 --VAAIKARFPAV-----HEPKKQDICYATQNRQDAV-KFMAPQVEVVIVVGSPNSSNSN 242
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L+E+AE G+P+Y +D+ +++ P WL G+ +G+T+GAS P
Sbjct: 243 RLRELAEKLGVPAYMVDTPEQVRP-----------------EWL-AGKRRVGLTAGASAP 284
Query: 317 DKAVEDVLKKV 327
++ + ++ ++
Sbjct: 285 EELAQSIVDRL 295
>gi|117619589|ref|YP_855227.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Aeromonas
hydrophila subsp. hydrophila ATCC 7966]
gi|166217142|sp|A0KG42.1|ISPH_AERHH RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|117560996|gb|ABK37944.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Aeromonas
hydrophila subsp. hydrophila ATCC 7966]
Length = 311
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 147/321 (45%), Gaps = 75/321 (23%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGA--AVEEMVTL 74
I++ +E++HN V +L+E + VEE D V +V+ A G AV EM
Sbjct: 33 IYVRHEVVHNRYVVNKLKEAGA--VFVEE----LDEVPDDSIVIFSAHGVSKAVREMA-- 84
Query: 75 NNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMK 134
++ +++ D TCP V+KV V + + +++ G H E + T G+Y +N +
Sbjct: 85 KSRALKVFDATCPLVTKVHMEVHRASRKGSEAVLIGHAGHPEVIGTM---GQY---ENRE 138
Query: 135 EAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEE 194
Y+ + + ++ K K +PD DL V QTT+ ET +
Sbjct: 139 GGMYLVE-----------TPEDVAKLKVK-------NPD-DLCFV---TQTTLSVDETSD 176
Query: 195 IGKLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGG 249
+ ++ + HF + IC ATQ RQDA+ +M VD +LVVG
Sbjct: 177 V-------------IDALRAHFPKIQGPRKDDICYATQNRQDAVREMAG-LVDAMLVVGS 222
Query: 250 WNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGI 309
NSSN++ L+E+AE G +Y ID I + +WL G IG+
Sbjct: 223 RNSSNSNRLRELAEKVGAKAYLIDDASMI-----------------EADWL-AGVEAIGV 264
Query: 310 TSGASTPDKAVEDVLKKVFEI 330
T+GAS P+ V+ V+ ++ E+
Sbjct: 265 TAGASAPEVLVQSVITRLREL 285
>gi|255525217|ref|ZP_05392159.1| hydroxymethylbutenyl pyrophosphate reductase [Clostridium
carboxidivorans P7]
gi|296188737|ref|ZP_06857124.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
carboxidivorans P7]
gi|255511080|gb|EET87378.1| hydroxymethylbutenyl pyrophosphate reductase [Clostridium
carboxidivorans P7]
gi|296046664|gb|EFG86111.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
carboxidivorans P7]
Length = 641
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 156/327 (47%), Gaps = 70/327 (21%)
Query: 15 EKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTL 74
+K++ +IHN V L+E + I ++ + +NK D+V++ + G + + L
Sbjct: 31 KKVFTLGPLIHNSDVVNYLKEKNIYPIELD----TINDLNKDDIVIIRSHGVPRKTIELL 86
Query: 75 NNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA-GKYIIVKNM 133
+K++ IVD TCP+V+ + V+++ K Y+ +I G +H E V + K II K+
Sbjct: 87 QSKSLNIVDATCPYVANIHKKVDEYYKLGYSILIVGDKNHPEVVGINGWCENKAIISKD- 145
Query: 134 KEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETE 193
G +L S K+ + +QTT E +
Sbjct: 146 -----------GSDLKNLPS------------------------KICVVSQTT----EKQ 166
Query: 194 EIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSS 253
E K V + V+N E ++FNTIC AT+ RQ++ K+ +KVD ++V+GG NSS
Sbjct: 167 ENWKRVLSII-----VKNCKE-IVAFNTICSATELRQNSAEKL-SKKVDFMVVLGGRNSS 219
Query: 254 NTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGA 313
NT+ L EI ++ + +++ I P + I K+ TIG+T+GA
Sbjct: 220 NTTKLYEICKNNCSNTIHVENSGEI-PDDIINSKIN----------------TIGVTAGA 262
Query: 314 STPDKAVEDVLKKVFEIKR-EEALQLA 339
STP +++ + K+ E K E + QLA
Sbjct: 263 STPHWIIKEAISKMCEGKNLEMSEQLA 289
>gi|187925120|ref|YP_001896762.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
phytofirmans PsJN]
gi|187716314|gb|ACD17538.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia
phytofirmans PsJN]
Length = 319
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 143/315 (45%), Gaps = 66/315 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V + L + I ++ + V G+ V+ A G + +
Sbjct: 43 IYVRHEIVHNAYVVEDLRKKGAIFI------ERLEEVPAGNTVIFSAHGVSKAVRSEAES 96
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V K ++ + ++ G H E T AG+ M
Sbjct: 97 RGLRVYDATCPLVTKVHIEVAKMRQDGFDIVMIGHKGHPEVEGTMGQAGE-----GMHLV 151
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTM-LKGETEEI 195
E + D ++ + A DP+ ++ QTT+ + E I
Sbjct: 152 EDIDD-----------------VQALQLA-----DPE----RIAFVTQTTLSVDDAAEII 185
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
G L K ++ E IC ATQ RQDA+ K + + D+++VVG NSSN+
Sbjct: 186 GAL-------KAKYPSIREP--KKQDICYATQNRQDAV-KFMAPQCDVVIVVGSPNSSNS 235
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L+E+AE G+P+Y +DS +I P W+ +G+ IG+T+GAS
Sbjct: 236 NRLRELAEKLGVPAYMVDSPDQIDP-----------------VWV-EGKRRIGVTAGASA 277
Query: 316 PDKAVEDVLKKVFEI 330
P+ + V+ ++ E+
Sbjct: 278 PEVLAQAVIARLREL 292
>gi|359395249|ref|ZP_09188302.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Halomonas
boliviensis LC1]
gi|357972496|gb|EHJ94941.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Halomonas
boliviensis LC1]
Length = 334
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 140/313 (44%), Gaps = 64/313 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L A + VEE D V +V+ A G +
Sbjct: 50 IYVRHEVVHNRFVVETLR--ARGAVFVEE----LDEVPDDVIVIFSAHGVSRAVQADAER 103
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V ++ K I+ G H E T G+Y
Sbjct: 104 RGLKVFDATCPLVTKVHLEVLRYAKRGQECILIGHEGHPEVEGTM---GRY--------- 151
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSK--GFDPDVDLVKVGIANQTTMLKGETEE 194
D GG + +L + +K V+K DP K+ QTT+ +T +
Sbjct: 152 ----DTSHGGHI---------YLVEDEKDVAKLEVNDPS----KLAFVTQTTLSMDDTAK 194
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
+ + + G N + IC ATQ RQDA+ ++ + DL+LVVG NSSN
Sbjct: 195 VIDALREKFAEIQGPRN--------DDICYATQNRQDAVRELAAQS-DLLLVVGSPNSSN 245
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
++ L+E++E G P+Y ID+ +I P WL + IG+T+GAS
Sbjct: 246 SNRLRELSERMGTPAYLIDNADQIDP-----------------QWL-ENVSRIGVTAGAS 287
Query: 315 TPDKAVEDVLKKV 327
P+ V+ V+ K+
Sbjct: 288 APEVLVKGVIAKL 300
>gi|293604227|ref|ZP_06686635.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Achromobacter
piechaudii ATCC 43553]
gi|292817452|gb|EFF76525.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Achromobacter
piechaudii ATCC 43553]
Length = 325
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 135/321 (42%), Gaps = 78/321 (24%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V + L I + D G +VV A G +
Sbjct: 42 IYVRHEIVHNRYVVQDLRAKGAIFI------DELDDAPTGSIVVFSAHGVSKAVRAEAEA 95
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA--GKYII----- 129
+ +Q+ D TCP V+KV V + + I+ G H E T A G Y++
Sbjct: 96 RGLQVFDATCPLVTKVHIEVARMRAAGREIIMIGHKGHPEVEGTLGQAQGGMYLVETVED 155
Query: 130 VKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLK 189
V N++ A DP+ + QTT+
Sbjct: 156 VANLQVA----------------------------------DPE----NLAFVTQTTL-- 175
Query: 190 GETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGG 249
+ + V + + +F N+ E S IC ATQ RQDA+ K++ + DL+LVVG
Sbjct: 176 --SVDDAAAVSQALKARF--PNIAEPKKS--DICYATQNRQDAV-KVLAPECDLVLVVGS 228
Query: 250 WNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGI 309
NSSN++ L+E+AE +G+ SY ID I P WL + IG+
Sbjct: 229 PNSSNSNRLREVAERKGVASYLIDGADSIDPA-----------------WLVDRK-RIGV 270
Query: 310 TSGASTPDKAVEDVLKKVFEI 330
T+GAS P+ V+ V+ +V E+
Sbjct: 271 TAGASAPEILVQQVIDRVKEL 291
>gi|377820000|ref|YP_004976371.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia sp.
YI23]
gi|357934835|gb|AET88394.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia sp.
YI23]
Length = 319
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 141/315 (44%), Gaps = 66/315 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V L E I +EE V +G ++ A G +
Sbjct: 43 IYVRHEIVHNAYVVADLREKGA--IFIEE----LSDVPEGATLIFSAHGVSKAVRGEAEA 96
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V K ++ + ++ G H E T +G+ M
Sbjct: 97 RGLRVFDATCPLVTKVHIEVAKMRQDGFDIVMIGHKGHPEVEGTMGQSGE-----GMHLV 151
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTM-LKGETEEI 195
E + D +L +L DP ++ QTT+ + + I
Sbjct: 152 EDIED-VLKLDLP---------------------DPQ----RIAYVTQTTLSVDDASAII 185
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
G L K ++ E IC ATQ RQDA+ K + + D+++VVG NSSN+
Sbjct: 186 GALKNKY-------PDIKEP--KKQDICYATQNRQDAV-KFLAPQCDVVIVVGSPNSSNS 235
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
S L+E+AE RGIP+Y +DS +I P W+ +G+ IG+T+GAS
Sbjct: 236 SRLREVAEKRGIPAYMVDSPTQIDP-----------------KWV-EGKKRIGVTAGASA 277
Query: 316 PDKAVEDVLKKVFEI 330
P+ + V+ ++ E+
Sbjct: 278 PEVLAQAVIARLREL 292
>gi|399156374|ref|ZP_10756441.1| hydroxymethylbutenyl pyrophosphate reductase [SAR324 cluster
bacterium SCGC AAA001-C10]
Length = 318
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 144/314 (45%), Gaps = 70/314 (22%)
Query: 17 IWITNEIIHNPTVNKRLEE---MAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVT 73
I++ +EI+HN V +RL + V+NI D + +G + A G + E
Sbjct: 42 IYVQHEIVHNKHVVQRLRNEGAVFVENI---------DKIPEGSHAIFSAHGVSPEVRKR 92
Query: 74 LNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNM 133
+ +Q++D TCP V+KV +++ K ++T I+ G ++H E T A ++I V +
Sbjct: 93 AEKRKLQVLDATCPLVTKVHREAQRYAKEEHTIILIGHHNHVEVKGTVGEAPEHIFV--V 150
Query: 134 KEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETE 193
E V D + PD KVG QTT+ +T
Sbjct: 151 GTVEEVSDLKI---------------------------PDEK--KVGYITQTTLSLDDTA 181
Query: 194 EIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSS 253
I +++ G + + IC ATQ RQ+A+ K++ ++VDL+LVVG NSS
Sbjct: 182 GIIIALKERFPEIKGP--------AKDDICYATQNRQNAV-KVLSKEVDLVLVVGAQNSS 232
Query: 254 NTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGA 313
N+ L E+AE G+ + I+S + P WL + + +GIT+GA
Sbjct: 233 NSVRLLEVAETTGVKARRIESAVELDP-----------------EWLEEVR-NVGITAGA 274
Query: 314 STPDKAVEDVLKKV 327
S P+ V+ ++ ++
Sbjct: 275 SAPEDIVQGIVAEI 288
>gi|385217755|ref|YP_005779231.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori F16]
gi|317177804|dbj|BAJ55593.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori F16]
Length = 274
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 138/312 (44%), Gaps = 67/312 (21%)
Query: 19 ITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKN 78
I +IHN RLE+ N+ +EE K+ + K V++ G +++ L NK
Sbjct: 30 IFGSLIHNAKEINRLEKNF--NVKIEENPKK---IPKNKSVIIRTHGIPKQDLEYLKNKG 84
Query: 79 VQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEY 138
V+I D TCP+V K VE K Y ++ G +H E S+A +V
Sbjct: 85 VKITDATCPYVIKPQQIVESMSKEGYQIVLFGDINHPEVKGVISYATNQALV-------- 136
Query: 139 VCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKL 198
+N +E L++ KV + +QTT ++ KL
Sbjct: 137 ---------INSLEELQEKKLQR----------------KVALVSQTT------KQTPKL 165
Query: 199 VEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHL 258
++ + + VE E I FNTIC+AT Q A + +E VD+++VVGG SSNT L
Sbjct: 166 LQ---IASYLVERCTEVRI-FNTICNATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQL 220
Query: 259 QEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 318
IA+ SY ++ E + EL W K + GIT+GASTPD
Sbjct: 221 LSIAKQHCEDSYLVEDENEL-------------ELA----WF-KDKKLCGITAGASTPDW 262
Query: 319 AVEDVLKKVFEI 330
+E+V +K+ I
Sbjct: 263 IIENVKQKISTI 274
>gi|296112581|ref|YP_003626519.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Moraxella
catarrhalis RH4]
gi|416216907|ref|ZP_11623941.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Moraxella
catarrhalis 7169]
gi|416225923|ref|ZP_11627022.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Moraxella
catarrhalis 103P14B1]
gi|416233665|ref|ZP_11629409.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Moraxella
catarrhalis 12P80B1]
gi|416237205|ref|ZP_11630722.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Moraxella
catarrhalis BC1]
gi|416242091|ref|ZP_11633225.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Moraxella
catarrhalis BC7]
gi|416247149|ref|ZP_11635455.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Moraxella
catarrhalis BC8]
gi|416251374|ref|ZP_11637684.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Moraxella
catarrhalis CO72]
gi|416254006|ref|ZP_11638463.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Moraxella
catarrhalis O35E]
gi|421779397|ref|ZP_16215889.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Moraxella
catarrhalis RH4]
gi|295920275|gb|ADG60626.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Moraxella
catarrhalis BBH18]
gi|326560165|gb|EGE10554.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Moraxella
catarrhalis 103P14B1]
gi|326561344|gb|EGE11702.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Moraxella
catarrhalis 7169]
gi|326566198|gb|EGE16351.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Moraxella
catarrhalis 12P80B1]
gi|326569742|gb|EGE19792.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Moraxella
catarrhalis BC8]
gi|326570773|gb|EGE20798.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Moraxella
catarrhalis BC1]
gi|326571652|gb|EGE21667.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Moraxella
catarrhalis BC7]
gi|326573036|gb|EGE23012.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Moraxella
catarrhalis CO72]
gi|326577703|gb|EGE27579.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Moraxella
catarrhalis O35E]
gi|407813107|gb|EKF83889.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Moraxella
catarrhalis RH4]
Length = 313
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 150/329 (45%), Gaps = 77/329 (23%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQN-IPVEEGKKQFDVVNKGDVVVLP 62
I EA ++F I++ +E++HN V +E++A + + VEE D V G +V+
Sbjct: 21 IVNEALRRF-NPPIYVRHEVVHNKFV---VEDLARRGAVFVEE----LDEVPDGAIVIFS 72
Query: 63 AFGA--AVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT 120
A G AVE+ +++ + D TCP V+KV V K KG +I+ G H E T
Sbjct: 73 AHGVSKAVED--EAKRRDLTVFDATCPLVTKVHIEVGKFAKGGMDAILIGHAGHPEVEGT 130
Query: 121 ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVG 180
G++ D GG ++ +E + F+ D L V
Sbjct: 131 M---GRF-------------DTSFGGRIH--------LVEDVEDVAKLDFERDKSLAFV- 165
Query: 181 IANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNT-----ICDATQERQDAMYK 235
QTT+ +T + ++ + + F + N IC ATQ RQDA+ K
Sbjct: 166 --TQTTLSMDDTANV-------------IDALKDRFPAINAPRKDDICYATQNRQDAV-K 209
Query: 236 MVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVE 295
++ +++LVVG NSSN++ L+E+AE G +Y ID+ ++
Sbjct: 210 LLSRHCEVVLVVGSPNSSNSNRLRELAERMGRRAYLIDNAGQM----------------- 252
Query: 296 KENWLPKGQITIGITSGASTPDKAVEDVL 324
+ W +G +G+T+GAS P+ +++VL
Sbjct: 253 SQAWF-EGVTYVGVTAGASAPEILIQEVL 280
>gi|421718104|ref|ZP_16157404.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori R038b]
gi|407222360|gb|EKE92161.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori R038b]
Length = 270
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 138/312 (44%), Gaps = 67/312 (21%)
Query: 19 ITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKN 78
I +IHN RLE+ N+ +EE K+ + K V++ G +++ L NK
Sbjct: 26 IFGSLIHNAKEINRLEKNF--NVKIEEDPKK---IPKNKSVIIRTHGIPKQDLEYLKNKG 80
Query: 79 VQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEY 138
V+I D TCP+V K VE K Y ++ G +H E S+A +V
Sbjct: 81 VKITDATCPYVIKPQQIVESMSKEGYQIVLFGDINHPEVKGVISYATNQALV-------- 132
Query: 139 VCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKL 198
+N +E L++ KV + +QTT ++ KL
Sbjct: 133 ---------INSLEELQEKKLQR----------------KVALVSQTT------KQTPKL 161
Query: 199 VEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHL 258
++ + + VE E I FNTIC+AT Q A + +E VD+++VVGG SSNT L
Sbjct: 162 LQ---IASYLVERCTEVRI-FNTICNATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQL 216
Query: 259 QEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 318
IA+ SY ++ E + EL W K + GIT+GASTPD
Sbjct: 217 LSIAKQHCKDSYLVEDENEL-------------ELA----WF-KDKKLCGITAGASTPDW 258
Query: 319 AVEDVLKKVFEI 330
+E+V +K+ I
Sbjct: 259 IIENVKQKISTI 270
>gi|358467846|ref|ZP_09177516.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Fusobacterium
sp. oral taxon 370 str. F0437]
gi|357066676|gb|EHI76817.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Fusobacterium
sp. oral taxon 370 str. F0437]
Length = 827
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 144/311 (46%), Gaps = 63/311 (20%)
Query: 18 WITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNK 77
+I ++HN V + +E + + EE + D + + D+VV+ A G + + L +
Sbjct: 33 YILGMLVHNKQVVEDMERKGFKLVKEEELLEDIDDLKENDIVVVRAHGTSKKVHEKLKER 92
Query: 78 NVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAE 137
V+I D TC +V+K+ +E + Y + G +H E SFA I ++++EA
Sbjct: 93 KVKIYDATCVFVNKIRQEIEIANEKGYNILFMGDKNHPEVKGVISFADNIQIFESLEEA- 151
Query: 138 YVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGI-ANQTTMLKGETEEIG 196
D +DL K + + QTT+ K + EE+
Sbjct: 152 --------------------------------MDVKIDLEKTYLLSTQTTLNKKKFEEV- 178
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+K+ EN ++ I F+ IC AT RQ A+ ++ K DL+++VG SSNT
Sbjct: 179 --------KKYFKENY-QNVIIFDKICGATAVRQKAVEELAI-KADLVIIVGDTKSSNTK 228
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L EI++ SY +++E+++ + + +G+ IGIT+GASTP
Sbjct: 229 KLYEISKKLNSESYLVENEEQL------------------DLTIFRGRKVIGITAGASTP 270
Query: 317 DKAVEDVLKKV 327
++ + ++ KK+
Sbjct: 271 EETIMNIEKKI 281
>gi|385681235|ref|ZP_10055163.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Amycolatopsis
sp. ATCC 39116]
Length = 317
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 144/330 (43%), Gaps = 77/330 (23%)
Query: 2 AFIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVL 61
A +A E + +++ EI+HN V + L E V I VEE + V +G++VV
Sbjct: 26 AVVAVEKALELYGPPVYVRKEIVHNRHVVESLRERGV--IFVEETSE----VPEGELVVF 79
Query: 62 PAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATA 121
A G + +N++ +D TCP V+KV V + + DY ++ G HEE TA
Sbjct: 80 SAHGVSPAVRAEAEERNLRTIDATCPLVTKVHKEVNRFAREDYDILLIGHEGHEEVEGTA 139
Query: 122 SFAGKYI-IVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVG 180
A ++ +V ++A V + DP KV
Sbjct: 140 GEAPTHVQLVDTAEDAAKV----------------------------EVRDPS----KVV 167
Query: 181 IANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYK 235
+QTT+ V++TM R V+ + F + + IC AT RQ A+
Sbjct: 168 WLSQTTL----------SVDETMER---VDQLKGRFPNLADPPSDDICYATSNRQTAVKA 214
Query: 236 MVEEKVDLILVVGGWNSSNTSHLQEIAEDRGI-PSYWIDSEKRIGPGNKIAYKLMHGELV 294
M E DL+LVVG NSSN+ L E+A+ G ++ ID + +
Sbjct: 215 MAAE-CDLVLVVGSKNSSNSQRLVEVAKQAGARDAHLIDFAREV---------------- 257
Query: 295 EKENWLPKGQITIGITSGASTPDKAVEDVL 324
E WL +G T+G+TSGAS PD V D+L
Sbjct: 258 -DEKWL-EGVTTVGVTSGASVPDVLVMDLL 285
>gi|296271021|ref|YP_003653653.1| hydroxymethylbutenyl pyrophosphate reductase [Thermobispora bispora
DSM 43833]
gi|296093808|gb|ADG89760.1| hydroxymethylbutenyl pyrophosphate reductase [Thermobispora bispora
DSM 43833]
Length = 323
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 140/319 (43%), Gaps = 75/319 (23%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +I+HN V KRLEE I V+E D V G +V+ A G A
Sbjct: 41 IYVRKQIVHNTHVVKRLEERGA--IFVDE----LDEVPDGAIVIFSAHGVAPTVHQEAAA 94
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ ++ +D TCP V+KV ++ DY ++ G HEE T A +I
Sbjct: 95 RGLKTIDATCPLVTKVHNEAKRFAAKDYDILLIGHAGHEEVEGTTGEAPDHI-------- 146
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
++ G L+G + +PD KV +QTT+ ET+E
Sbjct: 147 -----RLVDG-LDGVDKVQVR-------------NPD----KVVWLSQTTLSVDETKET- 182
Query: 197 KLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGGWN 251
V + E F + + IC AT RQ A+ K + + +L+LVVG N
Sbjct: 183 ------------VARLRERFPNLIDPPSDDICYATSNRQAAV-KRIAPQCELVLVVGSAN 229
Query: 252 SSNTSHLQEIAEDRGI-PSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGIT 310
SSN+ L E+A+ G ++ +D I +E WL +G T+G+T
Sbjct: 230 SSNSKRLVEVAKAYGAKAAHLVDDASYI-----------------REEWL-EGVTTVGLT 271
Query: 311 SGASTPDKAVEDVLKKVFE 329
SGAS P++ V+ VLK++ E
Sbjct: 272 SGASVPEELVQGVLKRLAE 290
>gi|148824589|ref|YP_001289343.1| lytB-related protein lytB1 [Mycobacterium tuberculosis F11]
gi|167966942|ref|ZP_02549219.1| lytB-related protein lytB1 [Mycobacterium tuberculosis H37Ra]
gi|253800428|ref|YP_003033429.1| lytB-related protein lytB1 [Mycobacterium tuberculosis KZN 1435]
gi|254233983|ref|ZP_04927308.1| lytB-related protein lytB1 [Mycobacterium tuberculosis C]
gi|254365995|ref|ZP_04982040.1| lytB-related protein lytB1 [Mycobacterium tuberculosis str.
Haarlem]
gi|289759539|ref|ZP_06518917.1| lytB-related protein lytB1 [Mycobacterium tuberculosis T85]
gi|308377327|ref|ZP_07668485.1| lytB-related protein lytB1 [Mycobacterium tuberculosis SUMu008]
gi|308378300|ref|ZP_07668713.1| lytB-related protein lytB1 [Mycobacterium tuberculosis SUMu009]
gi|308406138|ref|ZP_07669520.1| lytB-related protein lytB1 [Mycobacterium tuberculosis SUMu012]
gi|375297655|ref|YP_005101922.1| lytB-related protein lytB1 [Mycobacterium tuberculosis KZN 4207]
gi|385992614|ref|YP_005910912.1| lytB-related protein lytB1 [Mycobacterium tuberculosis CCDC5180]
gi|385996250|ref|YP_005914548.1| lytB-related protein lytB1 [Mycobacterium tuberculosis CCDC5079]
gi|392433866|ref|YP_006474910.1| lytB-related protein lytB1 [Mycobacterium tuberculosis KZN 605]
gi|424949014|ref|ZP_18364710.1| LYTB-like protein [Mycobacterium tuberculosis NCGM2209]
gi|449065494|ref|YP_007432577.1| lytB-related protein lytB1 [Mycobacterium bovis BCG str. Korea
1168P]
gi|124599512|gb|EAY58616.1| lytB-related protein lytB1 [Mycobacterium tuberculosis C]
gi|134151508|gb|EBA43553.1| lytB-related protein lytB1 [Mycobacterium tuberculosis str.
Haarlem]
gi|148723116|gb|ABR07741.1| lytB-related protein lytB1 [Mycobacterium tuberculosis F11]
gi|253321931|gb|ACT26534.1| lytB-related protein lytB1 [Mycobacterium tuberculosis KZN 1435]
gi|289715103|gb|EFD79115.1| lytB-related protein lytB1 [Mycobacterium tuberculosis T85]
gi|308348255|gb|EFP37106.1| lytB-related protein lytB1 [Mycobacterium tuberculosis SUMu008]
gi|308352980|gb|EFP41831.1| lytB-related protein lytB1 [Mycobacterium tuberculosis SUMu009]
gi|308364377|gb|EFP53228.1| lytB-related protein lytB1 [Mycobacterium tuberculosis SUMu012]
gi|328460160|gb|AEB05583.1| lytB-related protein lytB1 [Mycobacterium tuberculosis KZN 4207]
gi|339296204|gb|AEJ48315.1| lytB-related protein lytB1 [Mycobacterium tuberculosis CCDC5079]
gi|339299807|gb|AEJ51917.1| lytB-related protein lytB1 [Mycobacterium tuberculosis CCDC5180]
gi|358233529|dbj|GAA47021.1| LYTB-like protein [Mycobacterium tuberculosis NCGM2209]
gi|379029741|dbj|BAL67474.1| LYTB-like protein [Mycobacterium tuberculosis str. Erdman = ATCC
35801]
gi|392055275|gb|AFM50833.1| lytB-related protein lytB1 [Mycobacterium tuberculosis KZN 605]
gi|449034002|gb|AGE69429.1| lytB-related protein lytB1 [Mycobacterium bovis BCG str. Korea
1168P]
Length = 331
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 128/320 (40%), Gaps = 72/320 (22%)
Query: 14 EEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVT 73
E +++ +I+HN V L + + VE+ + D G VVV A G +
Sbjct: 49 EGPVYVRKQIVHNTVVVAELRDRGA--VFVEDLDEIPDPPPPGAVVVFSAHGVSPAVRAG 106
Query: 74 LNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKY-IIVKN 132
+ + +Q+VD TCP V+KV + T + G HEET T A + ++V+
Sbjct: 107 ADERGLQVVDATCPLVAKVHAEAARFAARGDTVVFIGHAGHEETEGTLGVAPRSTLLVQT 166
Query: 133 MKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGET 192
+ LN T+ ++L QTT+ ET
Sbjct: 167 PADV---------AALNLPEGTQLSYL-----------------------TQTTLALDET 194
Query: 193 EEIGKLVEKTMMRKFGVENVNEHFISFNT-----ICDATQERQDAMYKMVEEKVDLILVV 247
++ ++ + F + IC AT RQ A+ MV E D++LV+
Sbjct: 195 ADV-------------IDALRARFPTLGQPPSEDICYATTNRQRALQSMVGE-CDVVLVI 240
Query: 248 GGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITI 307
G NSSN+ L E+A+ G P+Y ID I P WL TI
Sbjct: 241 GSCNSSNSRRLVELAQRSGTPAYLIDGPDDIEP-----------------EWL-SSVSTI 282
Query: 308 GITSGASTPDKAVEDVLKKV 327
G+T+GAS P + V V+ +
Sbjct: 283 GVTAGASAPPRLVGQVIDAL 302
>gi|420458843|ref|ZP_14957652.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp A-26]
gi|420465813|ref|ZP_14964577.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-6]
gi|420493869|ref|ZP_14992439.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-16]
gi|420502508|ref|ZP_15001048.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-41]
gi|421714706|ref|ZP_16154025.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori R036d]
gi|421719381|ref|ZP_16158667.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori R046Wa]
gi|393074186|gb|EJB74947.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp A-26]
gi|393080143|gb|EJB80871.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-6]
gi|393111268|gb|EJC11791.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-16]
gi|393152424|gb|EJC52721.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-41]
gi|407217279|gb|EKE87114.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori R036d]
gi|407222552|gb|EKE92351.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori R046Wa]
Length = 274
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 138/312 (44%), Gaps = 67/312 (21%)
Query: 19 ITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKN 78
I +IHN RLE+ N+ +EE K+ + K V++ G +++ L NK
Sbjct: 30 IFGSLIHNAKEINRLEKNF--NVKIEEDPKK---IPKNKSVIIRTHGIPKQDLEYLKNKG 84
Query: 79 VQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEY 138
V+I D TCP+V K VE K Y ++ G +H E S+A +V
Sbjct: 85 VKITDATCPYVIKPQQIVESMSKEGYQIVLFGDINHPEVKGVISYATNQALV-------- 136
Query: 139 VCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKL 198
+N +E L++ KV + +QTT ++ KL
Sbjct: 137 ---------VNSLEELQEKKLQR----------------KVALVSQTT------KQTPKL 165
Query: 199 VEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHL 258
++ + + VE E I FNTIC+AT Q A + +E VD+++VVGG SSNT L
Sbjct: 166 LQ---IASYLVERCTEVRI-FNTICNATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQL 220
Query: 259 QEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 318
IA+ SY ++ E + EL W K + GIT+GASTPD
Sbjct: 221 LSIAKQHCKDSYLVEDENEL-------------ELA----WF-KDKRLCGITAGASTPDW 262
Query: 319 AVEDVLKKVFEI 330
+E+V +K+ I
Sbjct: 263 IIENVKQKISTI 274
>gi|15612046|ref|NP_223698.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori J99]
gi|15645028|ref|NP_207198.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori 26695]
gi|108563417|ref|YP_627733.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori HPAG1]
gi|210135213|ref|YP_002301652.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori P12]
gi|254779608|ref|YP_003057714.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori B38]
gi|308184792|ref|YP_003928925.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori SJM180]
gi|383749329|ref|YP_005424432.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori ELS37]
gi|384891407|ref|YP_005765540.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori 908]
gi|384897722|ref|YP_005773150.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Lithuania75]
gi|385224086|ref|YP_005784012.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori 2017]
gi|385231942|ref|YP_005791861.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori 2018]
gi|386746471|ref|YP_006219688.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori HUP-B14]
gi|386756049|ref|YP_006229266.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori PeCan18]
gi|410023636|ref|YP_006892889.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Rif1]
gi|410501403|ref|YP_006935930.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Rif2]
gi|410681922|ref|YP_006934324.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori 26695]
gi|419416299|ref|ZP_13956869.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori P79]
gi|419418134|ref|ZP_13958483.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori NCTC 11637 = CCUG 17874]
gi|420425131|ref|ZP_14924194.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp A-5]
gi|420431453|ref|ZP_14930472.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-16]
gi|420440197|ref|ZP_14939155.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-30]
gi|420446785|ref|ZP_14945681.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-43]
gi|420455271|ref|ZP_14954101.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp A-14]
gi|420477075|ref|ZP_14975736.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-23]
gi|420481105|ref|ZP_14979745.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-1]
gi|420490573|ref|ZP_14989158.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-13]
gi|420500601|ref|ZP_14999146.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-30]
gi|420510978|ref|ZP_15009466.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-1b]
gi|420519539|ref|ZP_15017982.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-5b]
gi|420524432|ref|ZP_15022841.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-13b]
gi|421709939|ref|ZP_16149297.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori R018c]
gi|421711800|ref|ZP_16151142.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori R030b]
gi|421713697|ref|ZP_16153027.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori R32b]
gi|421723252|ref|ZP_16162508.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori R056a]
gi|54037480|sp|P65186.1|ISPH_HELPJ RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|54041395|sp|P65185.1|ISPH_HELPY RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|122386334|sp|Q1CSL3.1|ISPH_HELPH RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|226741035|sp|B6JMP4.1|ISPH_HELP2 RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|2313506|gb|AAD07469.1| penicillin tolerance protein (lytB) [Helicobacter pylori 26695]
gi|4155562|gb|AAD06556.1| LYSIS TOLERANCE PROTEIN [Helicobacter pylori J99]
gi|107837190|gb|ABF85059.1| isoprenyl pyrophosphate and dimethylallyl diphosphate synthetase
[Helicobacter pylori HPAG1]
gi|210133181|gb|ACJ08172.1| 4-hydroxy-3-methyl-but-2-enyl diphosphate reductase [Helicobacter
pylori P12]
gi|254001520|emb|CAX29538.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori B38]
gi|307637716|gb|ADN80166.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori 908]
gi|308060712|gb|ADO02608.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori SJM180]
gi|317012827|gb|ADU83435.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Lithuania75]
gi|325996319|gb|ADZ51724.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori 2018]
gi|325997908|gb|ADZ50116.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori 2017]
gi|380874075|gb|AFF19856.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori ELS37]
gi|384374683|gb|EIE30062.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori NCTC 11637 = CCUG 17874]
gi|384375504|gb|EIE30786.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori P79]
gi|384552720|gb|AFI07668.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori HUP-B14]
gi|384562307|gb|AFI02773.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori PeCan18]
gi|393042377|gb|EJB43387.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp A-5]
gi|393049046|gb|EJB50012.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-16]
gi|393057048|gb|EJB57954.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-30]
gi|393064771|gb|EJB65603.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-43]
gi|393073621|gb|EJB74395.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp A-14]
gi|393094238|gb|EJB94849.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-23]
gi|393094688|gb|EJB95294.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-1]
gi|393108137|gb|EJC08673.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-13]
gi|393120883|gb|EJC21371.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-1b]
gi|393126982|gb|EJC27428.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-5b]
gi|393132529|gb|EJC32949.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-13b]
gi|393150983|gb|EJC51287.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-30]
gi|407210840|gb|EKE80714.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori R018c]
gi|407211750|gb|EKE81616.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori R030b]
gi|407214829|gb|EKE84671.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori R32b]
gi|407225222|gb|EKE94994.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori R056a]
gi|409893563|gb|AFV41621.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori 26695]
gi|409895293|gb|AFV43215.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Rif1]
gi|409896954|gb|AFV44808.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Rif2]
Length = 274
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 138/312 (44%), Gaps = 67/312 (21%)
Query: 19 ITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKN 78
I +IHN RLE+ N+ +EE K+ + K V++ G +++ L NK
Sbjct: 30 IFGSLIHNAKEINRLEKNF--NVKIEEDPKK---IPKNKSVIIRTHGIPKQDLEYLKNKG 84
Query: 79 VQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEY 138
V+I D TCP+V K VE K Y ++ G +H E S+A +V
Sbjct: 85 VKITDATCPYVIKPQQIVESMSKEGYQIVLFGDINHPEVKGVISYATNQALV-------- 136
Query: 139 VCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKL 198
+N +E L++ KV + +QTT ++ KL
Sbjct: 137 ---------VNSLEELQEKKLQR----------------KVALVSQTT------KQTPKL 165
Query: 199 VEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHL 258
++ + + VE E I FNTIC+AT Q A + +E VD+++VVGG SSNT L
Sbjct: 166 LQ---IASYLVERCTEVRI-FNTICNATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQL 220
Query: 259 QEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 318
IA+ SY ++ E + EL W K + GIT+GASTPD
Sbjct: 221 LSIAKQHCKDSYLVEDENEL-------------ELA----WF-KDKKLCGITAGASTPDW 262
Query: 319 AVEDVLKKVFEI 330
+E+V +K+ I
Sbjct: 263 IIENVKQKISTI 274
>gi|420450012|ref|ZP_14948877.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-45]
gi|420460529|ref|ZP_14959327.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp A-27]
gi|444374992|ref|ZP_21174293.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori A45]
gi|393068208|gb|EJB69011.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-45]
gi|393076486|gb|EJB77238.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp A-27]
gi|443620477|gb|ELT80922.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori A45]
Length = 274
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 138/312 (44%), Gaps = 67/312 (21%)
Query: 19 ITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKN 78
I +IHN RLE+ N+ +EE K+ + K V++ G +++ L NK
Sbjct: 30 IFGSLIHNAKEINRLEKNF--NVKIEEDPKK---IPKNKSVIIRTHGIPKQDLEYLKNKG 84
Query: 79 VQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEY 138
V+I D TCP+V K VE K Y ++ G +H E S+A +V
Sbjct: 85 VKITDATCPYVIKPQQIVESMSKEGYQIVLFGDINHPEVKGVISYATNQALV-------- 136
Query: 139 VCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKL 198
+N +E L++ KV + +QTT ++ KL
Sbjct: 137 ---------INSLEELQEKKLQR----------------KVALVSQTT------KQTPKL 165
Query: 199 VEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHL 258
++ + + VE E I FNTIC+AT Q A + +E VD+++VVGG SSNT L
Sbjct: 166 LQ---IASYLVERCTEVRI-FNTICNATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQL 220
Query: 259 QEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 318
IA+ SY ++ E + EL W ++ GIT+GASTPD
Sbjct: 221 LSIAKQHCKDSYLVEDENEL-------------ELA----WFRDKKLC-GITAGASTPDW 262
Query: 319 AVEDVLKKVFEI 330
+E+V +K+ I
Sbjct: 263 IIENVKQKISTI 274
>gi|420444069|ref|ZP_14942993.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-41]
gi|393058948|gb|EJB59831.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-41]
Length = 274
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 138/312 (44%), Gaps = 67/312 (21%)
Query: 19 ITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKN 78
I +IHN RLE+ N+ +EE K+ + K V++ G +++ L NK
Sbjct: 30 IFGSLIHNAKEINRLEKNF--NVKIEEDPKK---IPKNKSVIIRTHGIPKQDLEYLKNKG 84
Query: 79 VQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEY 138
V+I D TCP+V K VE K Y ++ G +H E S+A +V
Sbjct: 85 VKITDATCPYVIKPQQIVESMSKEGYQIVLFGDINHPEVKGVISYATNQALV-------- 136
Query: 139 VCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKL 198
+N +E L++ KV + +QTT ++ KL
Sbjct: 137 ---------INSLEELQEKKLQR----------------KVALVSQTT------KQTPKL 165
Query: 199 VEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHL 258
++ + + VE E I FNTIC+AT Q A + +E VD+++VVGG SSNT L
Sbjct: 166 LQ---IASYLVERCTEVRI-FNTICNATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQL 220
Query: 259 QEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 318
IA+ SY ++ E + EL W K + GIT+GASTPD
Sbjct: 221 LSIAKQYCKDSYLVEDENEL-------------ELA----WF-KDKKLCGITAGASTPDW 262
Query: 319 AVEDVLKKVFEI 330
+E+V +K+ I
Sbjct: 263 IIENVKQKISTI 274
>gi|309781504|ref|ZP_07676240.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ralstonia sp.
5_7_47FAA]
gi|404396835|ref|ZP_10988629.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ralstonia sp.
5_2_56FAA]
gi|308919917|gb|EFP65578.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ralstonia sp.
5_7_47FAA]
gi|348616900|gb|EGY66392.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ralstonia sp.
5_2_56FAA]
Length = 327
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 138/312 (44%), Gaps = 66/312 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V L + ++ D V G V+ A G +
Sbjct: 52 IYVRHEIVHNAYVVGDLRNKGAVFV------QELDDVPVGGTVIFSAHGVSRAVREAAEA 105
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGK-YIIVKNMKE 135
+ +++ D TCP V+KV V K + + I+ G H E T A ++V+++ E
Sbjct: 106 RGLRVFDATCPLVTKVHVEVSKMRAQGFEIIMIGHKGHPEVEGTMGQANDGMLLVESVDE 165
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
+ L ST+ A++ QTT+ ET+EI
Sbjct: 166 VAH---------LEVKDSTRLAYV-----------------------TQTTLSVDETQEI 193
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
V R V H IC ATQ RQDA+ K + +V++++VVG NSSN+
Sbjct: 194 ---VAAIKARFPAV-----HEPKKQDICYATQNRQDAV-KFMAPQVEVVIVVGSPNSSNS 244
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L+E+AE G+P+Y +D+ +++ P W+ G+ +G+T+GAS
Sbjct: 245 NRLRELAEKLGVPAYMVDTPEQVKP-----------------EWV-AGKRRVGLTAGASA 286
Query: 316 PDKAVEDVLKKV 327
P++ + ++ ++
Sbjct: 287 PEELAQSIVDRL 298
>gi|298526861|ref|ZP_07014270.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
gi|308232442|ref|ZP_07664083.1| lytB-related protein lytB1 [Mycobacterium tuberculosis SUMu001]
gi|308370245|ref|ZP_07666897.1| lytB-related protein lytB1 [Mycobacterium tuberculosis SUMu002]
gi|308371325|ref|ZP_07667134.1| lytB-related protein lytB1 [Mycobacterium tuberculosis SUMu003]
gi|308372522|ref|ZP_07667396.1| lytB-related protein lytB1 [Mycobacterium tuberculosis SUMu004]
gi|308373726|ref|ZP_07667639.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
tuberculosis SUMu005]
gi|308374856|ref|ZP_07667879.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
tuberculosis SUMu006]
gi|308376099|ref|ZP_07668190.1| lytB-related protein lytB1 [Mycobacterium tuberculosis SUMu007]
gi|308380675|ref|ZP_07669245.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
tuberculosis SUMu011]
gi|422814614|ref|ZP_16862838.1| lytB-like protein lytB1 [Mycobacterium tuberculosis CDC1551A]
gi|298496655|gb|EFI31949.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
gi|308213954|gb|EFO73353.1| lytB-related protein lytB1 [Mycobacterium tuberculosis SUMu001]
gi|308324900|gb|EFP13751.1| lytB-related protein lytB1 [Mycobacterium tuberculosis SUMu002]
gi|308329131|gb|EFP17982.1| lytB-related protein lytB1 [Mycobacterium tuberculosis SUMu003]
gi|308332966|gb|EFP21817.1| lytB-related protein lytB1 [Mycobacterium tuberculosis SUMu004]
gi|308336583|gb|EFP25434.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
tuberculosis SUMu005]
gi|308340456|gb|EFP29307.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
tuberculosis SUMu006]
gi|308344323|gb|EFP33174.1| lytB-related protein lytB1 [Mycobacterium tuberculosis SUMu007]
gi|308360772|gb|EFP49623.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
tuberculosis SUMu011]
gi|323717964|gb|EGB27152.1| lytB-like protein lytB1 [Mycobacterium tuberculosis CDC1551A]
Length = 335
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 128/320 (40%), Gaps = 72/320 (22%)
Query: 14 EEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVT 73
E +++ +I+HN V L + + VE+ + D G VVV A G +
Sbjct: 53 EGPVYVRKQIVHNTVVVAELRDRGA--VFVEDLDEIPDPPPPGAVVVFSAHGVSPAVRAG 110
Query: 74 LNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGK-YIIVKN 132
+ + +Q+VD TCP V+KV + T + G HEET T A + ++V+
Sbjct: 111 ADERGLQVVDATCPLVAKVHAEAARFAARGDTVVFIGHAGHEETEGTLGVAPRSTLLVQT 170
Query: 133 MKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGET 192
+ LN T+ ++L QTT+ ET
Sbjct: 171 PADV---------AALNLPEGTQLSYL-----------------------TQTTLALDET 198
Query: 193 EEIGKLVEKTMMRKFGVENVNEHFISFNT-----ICDATQERQDAMYKMVEEKVDLILVV 247
++ ++ + F + IC AT RQ A+ MV E D++LV+
Sbjct: 199 ADV-------------IDALRARFPTLGQPPSEDICYATTNRQRALQSMVGE-CDVVLVI 244
Query: 248 GGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITI 307
G NSSN+ L E+A+ G P+Y ID I P WL TI
Sbjct: 245 GSCNSSNSRRLVELAQRSGTPAYLIDGPDDIEP-----------------EWL-SSVSTI 286
Query: 308 GITSGASTPDKAVEDVLKKV 327
G+T+GAS P + V V+ +
Sbjct: 287 GVTAGASAPPRLVGQVIDAL 306
>gi|406675608|ref|ZP_11082795.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Aeromonas
veronii AMC35]
gi|404626998|gb|EKB23804.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Aeromonas
veronii AMC35]
Length = 311
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 150/321 (46%), Gaps = 75/321 (23%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAA--VEEMVTL 74
I++ +E++HN V +L++ + VEE D V +V+ A G A V EM
Sbjct: 33 IYVRHEVVHNRYVVNKLKDAGA--VFVEE----LDEVPDDSIVIFSAHGVAKTVREMA-- 84
Query: 75 NNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMK 134
++ +++ D TCP V+KV V + + +++ G H E + T G+Y +N +
Sbjct: 85 KSRALKVFDATCPLVTKVHMEVHRASRKGSEAVLIGHAGHPEVIGTM---GQY---ENRE 138
Query: 135 EAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEE 194
Y+ + + ++ K K +PD DL V QTT+ ET +
Sbjct: 139 GGMYLVE-----------TPEDVAKLKVK-------NPD-DLCFV---TQTTLSVDETSD 176
Query: 195 IGKLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGG 249
+ ++ + +HF + IC ATQ RQDA+ +M VD +LVVG
Sbjct: 177 V-------------IDALRKHFPKIQGPRKDDICYATQNRQDAVREMAG-LVDAMLVVGS 222
Query: 250 WNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGI 309
NSSN++ L+E+AE G +Y ID I + +WL +G IG+
Sbjct: 223 RNSSNSNRLRELAEKVGARAYLIDDASMI-----------------EASWL-EGVKAIGV 264
Query: 310 TSGASTPDKAVEDVLKKVFEI 330
T+GAS P+ V++V+ ++ E+
Sbjct: 265 TAGASAPEVLVQNVIARLREL 285
>gi|217034329|ref|ZP_03439745.1| hypothetical protein HP9810_491g22 [Helicobacter pylori 98-10]
gi|384887957|ref|YP_005762468.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori 52]
gi|384896327|ref|YP_005770316.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori 35A]
gi|385215618|ref|YP_005775574.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori F32]
gi|386754514|ref|YP_006227732.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Shi112]
gi|387908311|ref|YP_006338645.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori XZ274]
gi|420397283|ref|ZP_14896500.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori CPY1313]
gi|420398659|ref|ZP_14897871.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori CPY1962]
gi|420405398|ref|ZP_14904577.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori CPY6271]
gi|216943214|gb|EEC22681.1| hypothetical protein HP9810_491g22 [Helicobacter pylori 98-10]
gi|261839787|gb|ACX99552.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori 52]
gi|315586943|gb|ADU41324.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori 35A]
gi|317180146|dbj|BAJ57932.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori F32]
gi|384560772|gb|AFI01239.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Shi112]
gi|387573246|gb|AFJ81954.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori XZ274]
gi|393011702|gb|EJB12887.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori CPY1313]
gi|393013648|gb|EJB14823.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori CPY1962]
gi|393022840|gb|EJB23956.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori CPY6271]
Length = 274
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 138/312 (44%), Gaps = 67/312 (21%)
Query: 19 ITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKN 78
I +IHN RLE+ N+ +EE K+ + K V++ G +++ L NK
Sbjct: 30 IFGSLIHNAKEINRLEKNF--NVKIEEDPKK---IPKNKSVIIRTHGIPKQDLEYLKNKG 84
Query: 79 VQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEY 138
V+I D TCP+V K VE K Y ++ G +H E S+A +V
Sbjct: 85 VKITDATCPYVIKPQQIVESMSKEGYQIVLFGDINHPEVKGVISYATNQALV-------- 136
Query: 139 VCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKL 198
+N +E L++ KV + +QTT ++ KL
Sbjct: 137 ---------INSLEELQEKKLQR----------------KVALVSQTT------KQTPKL 165
Query: 199 VEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHL 258
++ + + VE E I FNTIC+AT Q A + +E VD+++VVGG SSNT L
Sbjct: 166 LQ---IASYLVERCTEVRI-FNTICNATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQL 220
Query: 259 QEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 318
IA+ SY ++ E + EL W K + GIT+GASTPD
Sbjct: 221 LSIAKQHCEDSYLVEDENEL-------------ELA----WF-KDKKLCGITAGASTPDW 262
Query: 319 AVEDVLKKVFEI 330
+E+V +K+ I
Sbjct: 263 IIENVKQKISTI 274
>gi|208434950|ref|YP_002266616.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori G27]
gi|420426583|ref|ZP_14925636.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp A-9]
gi|208432879|gb|ACI27750.1| isoprenyl pyrophosphate and dimethyl allyldiphosphate synthetase
[Helicobacter pylori G27]
gi|393044011|gb|EJB45008.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp A-9]
Length = 270
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 138/312 (44%), Gaps = 67/312 (21%)
Query: 19 ITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKN 78
I +IHN RLE+ N+ +EE K+ + K V++ G +++ L NK
Sbjct: 26 IFGSLIHNAKEINRLEKNF--NVKIEEDPKK---IPKNKSVIIRTHGIPKQDLEYLKNKG 80
Query: 79 VQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEY 138
V+I D TCP+V K VE K Y ++ G +H E S+A +V
Sbjct: 81 VKITDATCPYVIKPQQIVESMSKEGYQIVLFGDINHPEVKGVISYATNQALV-------- 132
Query: 139 VCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKL 198
+N +E L++ KV + +QTT ++ KL
Sbjct: 133 ---------VNSLEELQEKKLQR----------------KVALVSQTT------KQTPKL 161
Query: 199 VEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHL 258
++ + + VE E I FNTIC+AT Q A + +E VD+++VVGG SSNT L
Sbjct: 162 LQ---IASYLVERCTEVRI-FNTICNATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQL 216
Query: 259 QEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 318
IA+ SY ++ E + EL W K + GIT+GASTPD
Sbjct: 217 LSIAKQHCKDSYLVEDENEL-------------ELA----WF-KDKKLCGITAGASTPDW 258
Query: 319 AVEDVLKKVFEI 330
+E+V +K+ I
Sbjct: 259 IIENVKQKISTI 270
>gi|15842974|ref|NP_338011.1| lytB protein [Mycobacterium tuberculosis CDC1551]
gi|31794562|ref|NP_857055.1| LYTB-like protein LYTB1 [Mycobacterium bovis AF2122/97]
gi|57117100|ref|YP_177967.1| Probable LYTB-related protein LytB1 [Mycobacterium tuberculosis
H37Rv]
gi|121639306|ref|YP_979530.1| lytB-related protein lytB1 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148663245|ref|YP_001284768.1| lytB-related protein LytB1 [Mycobacterium tuberculosis H37Ra]
gi|224991803|ref|YP_002646492.1| lytB-related protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|254552484|ref|ZP_05142931.1| lytB-related protein lytB1 [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|289449078|ref|ZP_06438822.1| lytB-related protein lytB1 [Mycobacterium tuberculosis CPHL_A]
gi|289571617|ref|ZP_06451844.1| lytB-related protein lytB1 [Mycobacterium tuberculosis T17]
gi|289576113|ref|ZP_06456340.1| lytB family protein lytB1 [Mycobacterium tuberculosis K85]
gi|289752096|ref|ZP_06511474.1| lytB-related protein lytB1 [Mycobacterium tuberculosis T92]
gi|289755511|ref|ZP_06514889.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|294995850|ref|ZP_06801541.1| lytB-related protein lytB1 [Mycobacterium tuberculosis 210]
gi|297636042|ref|ZP_06953822.1| lytB-related protein lytB1 [Mycobacterium tuberculosis KZN 4207]
gi|297733041|ref|ZP_06962159.1| lytB-related protein lytB1 [Mycobacterium tuberculosis KZN R506]
gi|306973840|ref|ZP_07486501.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
tuberculosis SUMu010]
gi|313660373|ref|ZP_07817253.1| lytB-related protein lytB1 [Mycobacterium tuberculosis KZN V2475]
gi|339633387|ref|YP_004725029.1| LYTB-related protein LYTB1 [Mycobacterium africanum GM041182]
gi|378773167|ref|YP_005172900.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
bovis BCG str. Mexico]
gi|383309113|ref|YP_005361924.1| LYTB-related protein LYTB1 [Mycobacterium tuberculosis RGTB327]
gi|386000174|ref|YP_005918473.1| LYTB-like protein LYTB1 [Mycobacterium tuberculosis CTRI-2]
gi|386006218|ref|YP_005924497.1| LYTB-related protein LYTB1 [Mycobacterium tuberculosis RGTB423]
gi|392387989|ref|YP_005309618.1| lytB1 [Mycobacterium tuberculosis UT205]
gi|397675331|ref|YP_006516866.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
tuberculosis H37Rv]
gi|424805944|ref|ZP_18231375.1| penicillin tolerance protein [Mycobacterium tuberculosis W-148]
gi|433628522|ref|YP_007262151.1| Putative LytB-related protein LytB1 [Mycobacterium canettii CIPT
140060008]
gi|61226768|sp|P0A5I2.1|ISPH2_MYCTU RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2
gi|61226769|sp|P0A5I3.1|ISPH2_MYCBO RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2
gi|13883313|gb|AAK47825.1| lytB protein [Mycobacterium tuberculosis CDC1551]
gi|31620158|emb|CAD95586.1| PROBABLE LYTB-RELATED PROTEIN LYTB1 [Mycobacterium bovis AF2122/97]
gi|121494954|emb|CAL73440.1| Probable lytB-related protein lytB1 [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|148507397|gb|ABQ75206.1| putative lytB-related protein LytB1 [Mycobacterium tuberculosis
H37Ra]
gi|224774918|dbj|BAH27724.1| putative lytB-related protein [Mycobacterium bovis BCG str. Tokyo
172]
gi|289422036|gb|EFD19237.1| lytB-related protein lytB1 [Mycobacterium tuberculosis CPHL_A]
gi|289540544|gb|EFD45122.1| lytB family protein lytB1 [Mycobacterium tuberculosis K85]
gi|289545371|gb|EFD49019.1| lytB-related protein lytB1 [Mycobacterium tuberculosis T17]
gi|289692683|gb|EFD60112.1| lytB-related protein lytB1 [Mycobacterium tuberculosis T92]
gi|289696098|gb|EFD63527.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|308356822|gb|EFP45673.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
tuberculosis SUMu010]
gi|326905220|gb|EGE52153.1| penicillin tolerance protein [Mycobacterium tuberculosis W-148]
gi|339332743|emb|CCC28464.1| putative LYTB-related protein LYTB1 [Mycobacterium africanum
GM041182]
gi|341603331|emb|CCC66012.1| probable lytB-related protein lytB1 [Mycobacterium bovis BCG str.
Moreau RDJ]
gi|344221221|gb|AEN01852.1| LYTB-like protein LYTB1 [Mycobacterium tuberculosis CTRI-2]
gi|356595488|gb|AET20717.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 [Mycobacterium
bovis BCG str. Mexico]
gi|378546540|emb|CCE38819.1| lytB1 [Mycobacterium tuberculosis UT205]
gi|380723066|gb|AFE18175.1| LYTB-related protein LYTB1 [Mycobacterium tuberculosis RGTB327]
gi|380726706|gb|AFE14501.1| LYTB-related protein LYTB1 [Mycobacterium tuberculosis RGTB423]
gi|395140236|gb|AFN51395.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 [Mycobacterium
tuberculosis H37Rv]
gi|432156128|emb|CCK53383.1| Putative LytB-related protein LytB1 [Mycobacterium canettii CIPT
140060008]
gi|440582873|emb|CCG13276.1| putative LYTB-RELATED protein LYTB1 [Mycobacterium tuberculosis
7199-99]
gi|444896937|emb|CCP46203.1| Probable LYTB-related protein LytB1 [Mycobacterium tuberculosis
H37Rv]
Length = 329
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 128/320 (40%), Gaps = 72/320 (22%)
Query: 14 EEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVT 73
E +++ +I+HN V L + + VE+ + D G VVV A G +
Sbjct: 47 EGPVYVRKQIVHNTVVVAELRDRGA--VFVEDLDEIPDPPPPGAVVVFSAHGVSPAVRAG 104
Query: 74 LNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKY-IIVKN 132
+ + +Q+VD TCP V+KV + T + G HEET T A + ++V+
Sbjct: 105 ADERGLQVVDATCPLVAKVHAEAARFAARGDTVVFIGHAGHEETEGTLGVAPRSTLLVQT 164
Query: 133 MKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGET 192
+ LN T+ ++L QTT+ ET
Sbjct: 165 PADV---------AALNLPEGTQLSYL-----------------------TQTTLALDET 192
Query: 193 EEIGKLVEKTMMRKFGVENVNEHFISFNT-----ICDATQERQDAMYKMVEEKVDLILVV 247
++ ++ + F + IC AT RQ A+ MV E D++LV+
Sbjct: 193 ADV-------------IDALRARFPTLGQPPSEDICYATTNRQRALQSMVGE-CDVVLVI 238
Query: 248 GGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITI 307
G NSSN+ L E+A+ G P+Y ID I P WL TI
Sbjct: 239 GSCNSSNSRRLVELAQRSGTPAYLIDGPDDIEP-----------------EWL-SSVSTI 280
Query: 308 GITSGASTPDKAVEDVLKKV 327
G+T+GAS P + V V+ +
Sbjct: 281 GVTAGASAPPRLVGQVIDAL 300
>gi|385230336|ref|YP_005790252.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Puno135]
gi|344336774|gb|AEN18735.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Puno135]
Length = 274
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 138/312 (44%), Gaps = 67/312 (21%)
Query: 19 ITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKN 78
I +IHN RLE+ N+ +EE K+ + K V++ G +++ L NK
Sbjct: 30 IFGSLIHNAKEINRLEKNF--NVKIEEDPKK---IPKNKSVIIRTHGIPKQDLEYLKNKR 84
Query: 79 VQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEY 138
V+I D TCP+V K VE K Y ++ G +H E S+A +V
Sbjct: 85 VKITDATCPYVIKPQQIVESMSKEGYQIVLFGDINHPEVKGVISYATNQALV-------- 136
Query: 139 VCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKL 198
+N +E L++ KV + +QTT ++ KL
Sbjct: 137 ---------VNSLEELQEKKLQR----------------KVALVSQTT------KQTPKL 165
Query: 199 VEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHL 258
++ + + VE E I FNTIC+AT Q A + +E VD+++VVGG SSNT L
Sbjct: 166 LQ---IASYLVERCTEVRI-FNTICNATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQL 220
Query: 259 QEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 318
IA+ SY ++ E + EL W K + GIT+GASTPD
Sbjct: 221 LSIAKQHCEDSYLVEDENEL-------------ELA----WF-KDKKLCGITAGASTPDW 262
Query: 319 AVEDVLKKVFEI 330
+E+V +K+ I
Sbjct: 263 IIENVKQKISTI 274
>gi|433636469|ref|YP_007270096.1| Putative LytB-related protein LytB1 [Mycobacterium canettii CIPT
140070017]
gi|432168062|emb|CCK65588.1| Putative LytB-related protein LytB1 [Mycobacterium canettii CIPT
140070017]
Length = 329
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 128/320 (40%), Gaps = 72/320 (22%)
Query: 14 EEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVT 73
E +++ +I+HN V L + + VE+ + D G VVV A G +
Sbjct: 47 EGPVYVRKQIVHNTVVVAELRDRGA--VFVEDLDEIPDPPPPGAVVVFSAHGVSPAVRAG 104
Query: 74 LNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKY-IIVKN 132
+ + +Q+VD TCP V+KV + T + G HEET T A + ++V+
Sbjct: 105 ADERGLQVVDATCPLVAKVHAEAARFAARGDTVVFIGHAGHEETEGTLGVAPRSTLLVQT 164
Query: 133 MKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGET 192
+ LN T+ ++L QTT+ ET
Sbjct: 165 PADV---------AALNLPEGTQLSYL-----------------------TQTTLALDET 192
Query: 193 EEIGKLVEKTMMRKFGVENVNEHFISFNT-----ICDATQERQDAMYKMVEEKVDLILVV 247
++ ++ + F + IC AT RQ A+ MV E D++LV+
Sbjct: 193 ADV-------------IDALRARFPTLGQPPSEDICYATTNRQRALQSMVGE-CDVVLVI 238
Query: 248 GGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITI 307
G NSSN+ L E+A+ G P+Y ID I P WL TI
Sbjct: 239 GSCNSSNSRRLVELAQRSGTPAYLIDGPDDIEP-----------------EWL-SSVSTI 280
Query: 308 GITSGASTPDKAVEDVLKKV 327
G+T+GAS P + V V+ +
Sbjct: 281 GVTAGASAPPRLVGQVIDAL 300
>gi|433643574|ref|YP_007289333.1| Putative LytB-related protein LytB1 [Mycobacterium canettii CIPT
140070008]
gi|432160122|emb|CCK57441.1| Putative LytB-related protein LytB1 [Mycobacterium canettii CIPT
140070008]
Length = 329
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 128/320 (40%), Gaps = 72/320 (22%)
Query: 14 EEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVT 73
E +++ +I+HN V L + + VE+ + D G VVV A G +
Sbjct: 47 EGPVYVRKQIVHNTVVVAELRDRGA--VFVEDLDEIPDPPPPGAVVVFSAHGVSPAVRAG 104
Query: 74 LNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGK-YIIVKN 132
+ + +Q+VD TCP V+KV + T + G HEET T A + ++V+
Sbjct: 105 ADERGLQVVDATCPLVAKVHAEAARFAARGDTVVFIGHAGHEETEGTLGVAPRSTLLVQT 164
Query: 133 MKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGET 192
+ LN T+ ++L QTT+ ET
Sbjct: 165 PADV---------AALNLPEGTQLSYL-----------------------TQTTLALDET 192
Query: 193 EEIGKLVEKTMMRKFGVENVNEHFISFNT-----ICDATQERQDAMYKMVEEKVDLILVV 247
++ ++ + F + IC AT RQ A+ MV E D++LV+
Sbjct: 193 ADV-------------IDALRARFPTLGQPPSEDICYATTNRQRALQSMVGE-CDVVLVI 238
Query: 248 GGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITI 307
G NSSN+ L E+A+ G P+Y ID I P WL TI
Sbjct: 239 GSCNSSNSRRLVELAQRSGTPAYLIDGPDDIEP-----------------EWL-SSVSTI 280
Query: 308 GITSGASTPDKAVEDVLKKV 327
G+T+GAS P + V V+ +
Sbjct: 281 GVTAGASAPPRLVGQVIDAL 300
>gi|340628361|ref|YP_004746813.1| putative LYTB-like protein LYTB1 [Mycobacterium canettii CIPT
140010059]
gi|433632480|ref|YP_007266108.1| Putative LytB-related protein LytB1 [Mycobacterium canettii CIPT
140070010]
gi|340006551|emb|CCC45737.1| putative LYTB-related protein LYTB1 [Mycobacterium canettii CIPT
140010059]
gi|432164073|emb|CCK61507.1| Putative LytB-related protein LytB1 [Mycobacterium canettii CIPT
140070010]
Length = 329
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 128/320 (40%), Gaps = 72/320 (22%)
Query: 14 EEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVT 73
E +++ +I+HN V L + + VE+ + D G VVV A G +
Sbjct: 47 EGPVYVRKQIVHNTVVVAELRDRGA--VFVEDLDEIPDPPPPGAVVVFSAHGVSPAVRAG 104
Query: 74 LNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKY-IIVKN 132
+ + +Q+VD TCP V+KV + T + G HEET T A + ++V+
Sbjct: 105 ADERGLQVVDATCPLVAKVHAEAARFAARGDTVVFIGHAGHEETEGTLGVAPRSTLLVQT 164
Query: 133 MKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGET 192
+ LN T+ ++L QTT+ ET
Sbjct: 165 PADV---------AALNLPEGTQLSYL-----------------------TQTTLALDET 192
Query: 193 EEIGKLVEKTMMRKFGVENVNEHFISFNT-----ICDATQERQDAMYKMVEEKVDLILVV 247
++ ++ + F + IC AT RQ A+ MV E D++LV+
Sbjct: 193 ADV-------------IDALRARFPTLGQPPSEDICYATTNRQRALQSMVGE-CDVVLVI 238
Query: 248 GGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITI 307
G NSSN+ L E+A+ G P+Y ID I P WL TI
Sbjct: 239 GSCNSSNSRRLVELAQRSGTPAYLIDGPDDIEP-----------------EWL-SSVSTI 280
Query: 308 GITSGASTPDKAVEDVLKKV 327
G+T+GAS P + V V+ +
Sbjct: 281 GVTAGASAPPRLVGQVIDAL 300
>gi|440781995|ref|ZP_20960223.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding
domain protein [Clostridium pasteurianum DSM 525]
gi|440220713|gb|ELP59920.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding
domain protein [Clostridium pasteurianum DSM 525]
Length = 643
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 153/328 (46%), Gaps = 66/328 (20%)
Query: 9 RKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAV 68
R+Q+ ++I+ ++IHN V K LE + + + K D ++ D++++ + G +
Sbjct: 28 REQYKNKRIYTLGQLIHNNDVVKYLESKNIHAVDI----KDIDKLSNNDIIIIRSHGISQ 83
Query: 69 EEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYI 128
+ + L +KN+ IVD TCP+V+ + V+++ Y +I G +H E + +
Sbjct: 84 DIIELLKSKNLNIVDATCPYVANIHKKVKEYSNRGYQIVIVGDKNHPEVIGINGW----- 138
Query: 129 IVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTML 188
CD +A + K KG + D KV + QTT
Sbjct: 139 -----------CD-------------NKAIISK------KGENLDNISGKVCLVAQTTEK 168
Query: 189 KGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVG 248
+ +++ K+V + E I FNTIC+AT+ RQ ++ +E +I+V+G
Sbjct: 169 QENWQKVLKIVSERA----------EEIIPFNTICNATEVRQKKADELSKE-AQVIVVLG 217
Query: 249 GWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIG 308
G +SSNT+ L EI + + E I N GE+ + E + K I IG
Sbjct: 218 GHHSSNTTKLFEICKR--------NCENTIHVENS-------GEIPD-ELYKGKDNIIIG 261
Query: 309 ITSGASTPDKAVEDVLKKVFEIKREEAL 336
+ +GASTPD +++ + K+ + ++ E +
Sbjct: 262 VAAGASTPDWIIKEAINKMSDEQKLEGM 289
>gi|386752983|ref|YP_006226202.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Shi169]
gi|384559241|gb|AFH99708.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Shi169]
Length = 274
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 138/312 (44%), Gaps = 67/312 (21%)
Query: 19 ITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKN 78
I +IHN RLE+ N+ +EE K+ + K V++ G +++ L NK
Sbjct: 30 IFGSLIHNAKEINRLEKNF--NVKIEEDPKK---IPKNKSVIIRTHGIPKQDLEYLKNKG 84
Query: 79 VQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEY 138
V+I D TCP+V K VE K Y ++ G +H E S+A +V
Sbjct: 85 VKITDATCPYVIKPQQIVESMSKEGYQIVLFGDINHPEVKGVISYATNQALV-------- 136
Query: 139 VCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKL 198
+N +E L++ KV + +QTT ++ KL
Sbjct: 137 ---------INSLEELQEKKLQR----------------KVALVSQTT------KQTPKL 165
Query: 199 VEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHL 258
++ + + VE E I FNTIC+AT Q A + +E VD+++VVGG SSNT L
Sbjct: 166 LQ---IASYLVERCTEVRI-FNTICNATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQL 220
Query: 259 QEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 318
IA+ SY ++ E + EL W K + GIT+GASTPD
Sbjct: 221 LNIAKQHCEDSYLVEDENEL-------------ELA----WF-KDKKLCGITAGASTPDW 262
Query: 319 AVEDVLKKVFEI 330
+E+V +K+ I
Sbjct: 263 IIENVKQKISTI 274
>gi|299065961|emb|CBJ37142.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ralstonia
solanacearum CMR15]
Length = 324
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 134/311 (43%), Gaps = 64/311 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V L + ++ D V G V+ A G +
Sbjct: 49 IYVRHEIVHNAYVVSDLRSKGAVFV------QELDDVPVGGTVIFSAHGVSRAVRQAAEA 102
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V K + + I+ G H E T
Sbjct: 103 RGLRVFDATCPLVTKVHVEVSKMRAQGFEIIMIGHKGHPEVEGTM--------------- 147
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
G+ + E+ + + AV D ++ QTT+ ET+EI
Sbjct: 148 ---------GQADDGMLLVESVDDVARLAVK-------DPARLAYVTQTTLSVDETQEI- 190
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
V R V H IC ATQ RQDA+ K + +V++++VVG NSSN++
Sbjct: 191 --VAAIKARFPAV-----HEPKKQDICYATQNRQDAV-KFMAPQVEVVIVVGSPNSSNSN 242
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L+E+AE G+P+Y +D+ +++ P WL G+ +G+T+GAS P
Sbjct: 243 RLRELAEKLGVPAYMVDTPEQVRP-----------------EWL-AGKRRVGLTAGASAP 284
Query: 317 DKAVEDVLKKV 327
++ + ++ ++
Sbjct: 285 EELAQSIVDRL 295
>gi|237756865|ref|ZP_04585344.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Sulfurihydrogenibium yellowstonense SS-5]
gi|237690974|gb|EEP60103.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Sulfurihydrogenibium yellowstonense SS-5]
Length = 288
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 145/331 (43%), Gaps = 68/331 (20%)
Query: 4 IAYEARKQFPEE--KIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVL 61
IA + KQ E+ + IIHN V L+ + V+ + + + + GD V++
Sbjct: 18 IAVDMAKQAGEKLGHAYTNGPIIHNKQVVNYLKSIGVEEM------QGYSQLKPGDTVII 71
Query: 62 PAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATA 121
+ G + L +V ++D TCP+V KV V++ + Y +I G+ H E + T
Sbjct: 72 RSHGVPPKTERMLKELHVNVLDATCPFVKKVHDKVKQLVEEGYFVVIIGEEGHPEVIGTL 131
Query: 122 SFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGI 181
E++G E F + KK + ++G+
Sbjct: 132 GHLE---------------------EVDGKGVVVENFEDLVKKVPKRN--------RIGV 162
Query: 182 ANQTTMLKGE-TEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEK 240
QTT + E +G L E T E FNTICDAT RQ+ + K+ E
Sbjct: 163 VAQTTQSEDFFREAVGYLAENT-----------EELKVFNTICDATSVRQEEVKKIAPE- 210
Query: 241 VDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWL 300
VD+++++GG +S NT L +I++ +Y I++ + +E W
Sbjct: 211 VDVMIIIGGKHSGNTQRLYQISKALNPNTYHIETADEL-----------------QEQWF 253
Query: 301 PKGQITIGITSGASTPDKAVEDVLKKVFEIK 331
+ IG+++GASTPD +++V+ K+ EIK
Sbjct: 254 ENKE-NIGVSAGASTPDWIIQEVVNKIKEIK 283
>gi|168184863|ref|ZP_02619527.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/ribosomal
protein S1 homolog [Clostridium botulinum Bf]
gi|237795216|ref|YP_002862768.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding
domain-containing protein [Clostridium botulinum Ba4
str. 657]
gi|182672058|gb|EDT84019.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/ribosomal
protein S1 homolog [Clostridium botulinum Bf]
gi|229260583|gb|ACQ51616.1| putative 4-hydroxy-3-methylbut-2-enyl diphosphate
reductase/ribosomal protein S1 [Clostridium botulinum
Ba4 str. 657]
Length = 644
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 138/312 (44%), Gaps = 68/312 (21%)
Query: 16 KIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLN 75
KI+ +IHN V L++ ++ I +E+ D +NK D +++ + G ++ + L
Sbjct: 32 KIYTLGPLIHNNDVVNLLKDKGIEPISIED----IDKLNKDDTIIIRSHGVPLQTINYLK 87
Query: 76 NKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKE 135
+K + IV+TTCP VS + +K+ + Y +I G +H E + + I+
Sbjct: 88 DKGLNIVNTTCPHVSNIQIKAKKYYEEGYKIVIVGDENHPEVIGINGWCNNSAII----- 142
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
T L+K KV + QTT + E++
Sbjct: 143 --------------SKDGTNINNLDK----------------KVCVLCQTTEKQENWEKV 172
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
++ K + ++FNTIC+ATQ RQ A K+ EKVD ++V+GG NSSNT
Sbjct: 173 LNILIKN----------SREILAFNTICNATQVRQQAAKKL-SEKVDSMIVIGGKNSSNT 221
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L EI + + +++ K I + K IG+T+GAST
Sbjct: 222 TKLYEICKSNCKNTIHVENVKEIPE------------------HIYKNSNIIGVTAGAST 263
Query: 316 PDKAVEDVLKKV 327
PD +++ + K+
Sbjct: 264 PDWIIKEAINKM 275
>gi|229525337|ref|ZP_04414742.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
bv. albensis VL426]
gi|229338918|gb|EEO03935.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
bv. albensis VL426]
Length = 320
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 142/315 (45%), Gaps = 67/315 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L++ + + ++ + V ++V+ A G +
Sbjct: 37 IYVRHEVVHNRFVVEGLKQRGARFV------EELNEVPDDNIVIFSAHGVSQAVRQEAKE 90
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++ + D TCP V+KV V + + ++ G H E T G+Y
Sbjct: 91 RSLTVFDATCPLVTKVHMEVARASRKHMEVVLIGHAGHPEVEGTM---GQY--------- 138
Query: 137 EYVCDYILGGELNGSSSTKEAFL-EKFKKAVS---KGFDPDVDLVKVGIANQTTMLKGET 192
+S T +L EK + VS K DP + +QTT+ ET
Sbjct: 139 --------------ASDTGGMYLVEKPEDVVSLQAKVKDPS----NLHYVSQTTLSVDET 180
Query: 193 EEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNS 252
++ + + + G + IC ATQ RQDA+ +++ E+VD+++VVG NS
Sbjct: 181 ADVIDELRRVFPKIQGPRK--------DDICYATQNRQDAV-RILAEQVDVMVVVGSKNS 231
Query: 253 SNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSG 312
SN++ L+E+AE G P Y ID + I P W Q+ IG+T+G
Sbjct: 232 SNSTRLKELAEKLGTPGYLIDCPQDIDP-----------------EWFVDAQL-IGVTAG 273
Query: 313 ASTPDKAVEDVLKKV 327
AS P++ V +L+++
Sbjct: 274 ASAPEELVNQILERI 288
>gi|420400035|ref|ZP_14899238.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori CPY3281]
gi|393018656|gb|EJB19803.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori CPY3281]
Length = 274
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 138/312 (44%), Gaps = 67/312 (21%)
Query: 19 ITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKN 78
I +IHN RLE+ N+ +EE K+ + K V++ G +++ L NK
Sbjct: 30 IFGSLIHNAKEINRLEKNF--NVKIEEDPKK---IPKNKSVIIRTHGIPKQDLEYLKNKG 84
Query: 79 VQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEY 138
V+I D TCP+V K VE K Y ++ G +H E S+A +V
Sbjct: 85 VKITDATCPYVIKPQQIVESMSKEGYQIVLFGDINHPEVKGVISYATNQALV-------- 136
Query: 139 VCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKL 198
+N +E L++ KV + +QTT ++ KL
Sbjct: 137 ---------INSLEELQEKKLQR----------------KVALVSQTT------KQTPKL 165
Query: 199 VEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHL 258
++ + + VE E I FNTIC+AT Q A + +E VD+++VVGG SSNT L
Sbjct: 166 LQ---IASYLVERCTEVRI-FNTICNATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQL 220
Query: 259 QEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 318
IA+ SY ++ E + EL W K + GIT+GASTPD
Sbjct: 221 LSIAKQHCEDSYLVEDENEL-------------ELA----WF-KDKKLCGITAGASTPDW 262
Query: 319 AVEDVLKKVFEI 330
+E+V +K+ I
Sbjct: 263 IIENVKQKISTI 274
>gi|384894582|ref|YP_005768631.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Sat464]
gi|308063836|gb|ADO05723.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Sat464]
Length = 274
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 138/312 (44%), Gaps = 67/312 (21%)
Query: 19 ITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKN 78
I +IHN RLE+ N+ +EE K+ + K V++ G +++ L NK
Sbjct: 30 IFGSLIHNAKEINRLEKNF--NVKIEEDPKK---IPKNKSVIIRTHGIPKQDLEYLKNKG 84
Query: 79 VQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEY 138
V+I D TCP+V K VE K Y ++ G +H E S+A +V
Sbjct: 85 VKITDATCPYVIKPQQIVESMSKEGYQIVLFGDINHPEVKGVISYATNQALV-------- 136
Query: 139 VCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKL 198
+N +E L++ KV + +QTT ++ KL
Sbjct: 137 ---------VNSLEELQEKKLQR----------------KVALVSQTT------KQTPKL 165
Query: 199 VEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHL 258
++ + + VE E I FNTIC+AT Q A + +E VD+++VVGG SSNT L
Sbjct: 166 LQ---IASYLVERCTEVRI-FNTICNATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQL 220
Query: 259 QEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 318
IA+ SY ++ E + EL W K + GIT+GASTPD
Sbjct: 221 LSIAKQHCEDSYLVEDENEL-------------ELA----WF-KNKKLCGITAGASTPDW 262
Query: 319 AVEDVLKKVFEI 330
+E+V +K+ I
Sbjct: 263 IIENVKQKISTI 274
>gi|107023437|ref|YP_621764.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
cenocepacia AU 1054]
gi|105893626|gb|ABF76791.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
cenocepacia AU 1054]
Length = 326
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 143/315 (45%), Gaps = 66/315 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V + L++ I VEE + V G+ V+ A G + +
Sbjct: 48 IYVRHEIVHNKYVVEDLKKKGA--IFVEE----LEEVPAGNTVIFSAHGVSKAVRDEADV 101
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ ++I D TCP V+KV V K ++ ++ G H E T + + M
Sbjct: 102 RGLRIYDATCPLVTKVHVEVAKMRQDGVDIVMIGHKGHPEVEGTMGQ-----VERGMHLV 156
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTM-LKGETEEI 195
E V D ++K + A DP+ ++ + QTT+ + E I
Sbjct: 157 ESVED-----------------VQKLELA-----DPE----RIALVTQTTLSVDDAAEII 190
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
G L K + E IC ATQ RQDA+ K + + D+++VVG NSSN+
Sbjct: 191 GAL-------KAKYPKIREP--KKQDICYATQNRQDAV-KFMAPQCDVVIVVGSPNSSNS 240
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
S L+E+AE RG+ +Y +D+ +I P W+ G+ IG+T+GAS
Sbjct: 241 SRLREVAEKRGVAAYMVDAPDQIDPA-----------------WV-AGKRRIGVTAGASA 282
Query: 316 PDKAVEDVLKKVFEI 330
P+ + V+ ++ E+
Sbjct: 283 PEALAQAVIARLREL 297
>gi|17547161|ref|NP_520563.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ralstonia
solanacearum GMI1000]
gi|20138571|sp|P58677.1|ISPH_RALSO RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|17429463|emb|CAD16149.1| probable 4-hydroxy-3-methylbut-2-enyl diphosphate reductase protein
[Ralstonia solanacearum GMI1000]
Length = 324
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 134/311 (43%), Gaps = 64/311 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V L + ++ D V G V+ A G +
Sbjct: 49 IYVRHEIVHNAYVVSDLRSKGAVFV------QELDDVPVGGTVIFSAHGVSRAVRQAAEA 102
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V K + + I+ G H E T
Sbjct: 103 RGLRVFDATCPLVTKVHVEVSKMRTQGFEIIMIGHKGHPEVEGTM--------------- 147
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
G+ + E+ + + AV D ++ QTT+ ET+EI
Sbjct: 148 ---------GQADDGMLLVESVDDVARLAVK-------DPARLAYVTQTTLSVDETQEI- 190
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
V R V H IC ATQ RQDA+ K + +V++++VVG NSSN++
Sbjct: 191 --VAAIKARFPAV-----HEPKKQDICYATQNRQDAV-KFMAPQVEVVIVVGSPNSSNSN 242
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L+E+AE G+P+Y +D+ +++ P WL G+ +G+T+GAS P
Sbjct: 243 RLRELAEKLGVPAYMVDTPEQVRP-----------------EWL-AGKRRVGLTAGASAP 284
Query: 317 DKAVEDVLKKV 327
++ + ++ ++
Sbjct: 285 EELAQSIVDRL 295
>gi|420435174|ref|ZP_14934174.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-27]
gi|420445406|ref|ZP_14944318.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-42]
gi|420492210|ref|ZP_14990785.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-15]
gi|420498090|ref|ZP_14996649.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-25]
gi|420525975|ref|ZP_15024377.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-15b]
gi|420527904|ref|ZP_15026297.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-25c]
gi|420529672|ref|ZP_15028058.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-25d]
gi|393052942|gb|EJB53888.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-27]
gi|393062241|gb|EJB63098.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-42]
gi|393108011|gb|EJC08550.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-15]
gi|393111329|gb|EJC11851.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-25]
gi|393132720|gb|EJC33139.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-15b]
gi|393134450|gb|EJC34861.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-25c]
gi|393136878|gb|EJC37267.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp P-25d]
Length = 274
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 138/312 (44%), Gaps = 67/312 (21%)
Query: 19 ITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKN 78
I +IHN RLE+ N+ +EE K+ + K V++ G +++ L NK
Sbjct: 30 IFGSLIHNAKEINRLEKNF--NVKIEEDPKK---IPKNKSVIIRTHGIPKQDLEYLKNKG 84
Query: 79 VQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEY 138
V+I D TCP+V K VE K Y ++ G +H E S+A +V
Sbjct: 85 VKITDATCPYVIKPQQIVESMSKEGYQIVLFGDINHPEVKGVISYATNQALV-------- 136
Query: 139 VCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKL 198
+N +E L++ KV + +QTT ++ KL
Sbjct: 137 ---------VNSLEELQEKKLQR----------------KVALVSQTT------KQTPKL 165
Query: 199 VEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHL 258
++ + + VE E I FNTIC+AT Q A + +E VD+++VVGG SSNT L
Sbjct: 166 LQ---IASYLVERCTEVRI-FNTICNATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQL 220
Query: 259 QEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 318
IA+ SY ++ E + EL W ++ GIT+GASTPD
Sbjct: 221 LSIAKQHCKDSYLVEDENEL-------------ELA----WFRDKKLC-GITAGASTPDW 262
Query: 319 AVEDVLKKVFEI 330
+E+V +K+ I
Sbjct: 263 IIENVKQKISTI 274
>gi|413963427|ref|ZP_11402654.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
sp. SJ98]
gi|413929259|gb|EKS68547.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
sp. SJ98]
Length = 320
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 140/314 (44%), Gaps = 64/314 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V L + I ++ V +G ++ A G +
Sbjct: 44 IYVRHEIVHNAYVVADLRKKGAIFI------EELSDVPEGATLIFSAHGVSKAVRSEAEA 97
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V K ++ + ++ G H E T +G+ M
Sbjct: 98 RGLRVFDATCPLVTKVHIEVAKMRQEGFDIVMIGHKGHPEVEGTMGQSGE-----GMHLV 152
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
E + D +L +L DP ++ QTT+ ++
Sbjct: 153 EDI-DDVLKLDLP---------------------DPQ----RIAYVTQTTL---SVDDAS 183
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+++ + ++ + IC ATQ RQDA+ K + + D+++VVG NSSN+S
Sbjct: 184 AIIDALKSKYPEIKEPKKQ-----DICYATQNRQDAV-KFLAPQCDVVIVVGSPNSSNSS 237
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L+E+AE RGIPSY +DS +I P W+ +G+ IG+T+GAS P
Sbjct: 238 RLREVAEKRGIPSYMVDSPTQIDP-----------------RWV-EGKKRIGVTAGASAP 279
Query: 317 DKAVEDVLKKVFEI 330
+ + V+ ++ E+
Sbjct: 280 EVLAQAVIARLREL 293
>gi|381159940|ref|ZP_09869172.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Thiorhodovibrio sp. 970]
gi|380878004|gb|EIC20096.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Thiorhodovibrio sp. 970]
Length = 319
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 139/314 (44%), Gaps = 61/314 (19%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +E++HN V + L+E V I + + V G V V A G A+
Sbjct: 33 LYVRHEVVHNRYVVESLKERGVIFI------EDVNTVPAGAVCVFSAHGVALGVRRQAEE 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V +H + ++ G H E T M +
Sbjct: 87 RGLRLYDATCPLVTKVHLEVARHCREGADVVLIGHRGHPEVEGT------------MGQC 134
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
+ + NG E+ + V DPD KV QTT+ ++
Sbjct: 135 Q---------DGNGRVWLIESVADIDALEVR---DPD----KVCYVTQTTL---SVDDSA 175
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
++E R ++ + + IC ATQ RQDA+ K+ E DL+LVVG SSN++
Sbjct: 176 AMIEALRARFPNIKGPKK-----SDICYATQNRQDAVRKLAAE-ADLMLVVGSVTSSNSN 229
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L+E+AE +G+P+Y ID + I P WL + + +T+GAS P
Sbjct: 230 RLRELAEKQGMPAYLIDGAEDIDPA-----------------WLLD-RARVSVTAGASAP 271
Query: 317 DKAVEDVLKKVFEI 330
+ V V++++ ++
Sbjct: 272 ELLVRQVIERLRQL 285
>gi|384893032|ref|YP_005767125.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Cuz20]
gi|385220856|ref|YP_005782328.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori India7]
gi|425791259|ref|YP_007019176.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Aklavik86]
gi|308062329|gb|ADO04217.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Cuz20]
gi|317009663|gb|ADU80243.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori India7]
gi|425629574|gb|AFX90114.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Aklavik86]
Length = 274
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 138/312 (44%), Gaps = 67/312 (21%)
Query: 19 ITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKN 78
I +IHN RLE+ N+ +EE K+ + K V++ G +++ L NK
Sbjct: 30 IFGSLIHNAKEINRLEKNF--NVKIEEDPKK---IPKNKSVIIRTHGIPKQDLEYLKNKG 84
Query: 79 VQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEY 138
V+I D TCP+V K VE K Y ++ G +H E S+A +V
Sbjct: 85 VKITDATCPYVIKPQQIVESMSKEGYQIVLFGDINHPEVKGVISYATNQALV-------- 136
Query: 139 VCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKL 198
+N +E L++ KV + +QTT ++ KL
Sbjct: 137 ---------VNSLEELQEKKLQR----------------KVALVSQTT------KQTPKL 165
Query: 199 VEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHL 258
++ + + VE E I FNTIC+AT Q A + +E VD+++VVGG SSNT L
Sbjct: 166 LQ---IASYLVERCTEVRI-FNTICNATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQL 220
Query: 259 QEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 318
IA+ SY ++ E + EL W K + GIT+GASTPD
Sbjct: 221 LSIAKQHCEDSYLVEDENEL-------------ELA----WF-KDKKLCGITAGASTPDW 262
Query: 319 AVEDVLKKVFEI 330
+E+V +K+ I
Sbjct: 263 IIENVKQKISTI 274
>gi|282856369|ref|ZP_06265648.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pyramidobacter
piscolens W5455]
gi|282585740|gb|EFB91029.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pyramidobacter
piscolens W5455]
Length = 293
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 130/314 (41%), Gaps = 62/314 (19%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
++ IHNP +RL++M ++ + E + G ++ A GAA + L
Sbjct: 32 VYALGSPIHNPQEVERLQKMGLRVVQSE------TEIPAGATALIRAHGAAPGVLENLRK 85
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+NV ++D TCP+V + + Y +I G H ETV
Sbjct: 86 RNVSVIDGTCPFVRAAQGHARELSEAGYHVLILGNEKHPETVG----------------- 128
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
+ G + G S+ F + F V + K+G+ +QTT EE
Sbjct: 129 -------IRGYVRGPSTVISTIPSLFSSTI---FKSSVKIHKLGLVSQTTQ-----EE-- 171
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
V + +NTIC AT ERQ+A+ ++ + V+ ++V+GG NS+NT
Sbjct: 172 ---SLLAEAAKAALGVADELRIYNTICRATIERQEAVRRLASQ-VEGMIVIGGHNSANTG 227
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L IA D + WI+ G+L W+ + ++ IGI +GASTP
Sbjct: 228 KLCRIARDSSCDAVWIEHA---------------GQL--DRRWVLEKRV-IGIAAGASTP 269
Query: 317 DKAVEDVLKKVFEI 330
D +E + + I
Sbjct: 270 DWLIEQLHNAIHNI 283
>gi|307726527|ref|YP_003909740.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia sp.
CCGE1003]
gi|307587052|gb|ADN60449.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia sp.
CCGE1003]
Length = 314
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 134/311 (43%), Gaps = 70/311 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V L + + + ++ D V +G V + A G A +
Sbjct: 33 VYVRHEIVHNRHVVDNLRQKGARFV------EELDEVPQGAVAIFSAHGVAQKVERDAQA 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKE 135
+ + ++D TCP V+KV ++ T I+ G H E T GK ++V++ E
Sbjct: 87 RGLDVLDATCPLVTKVHVQGRQYVAAGRTLILIGHAGHPEVEGTIGQIPGKVLLVQSEAE 146
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
E+ D VD + QTT+ +T I
Sbjct: 147 VEH-------------------------------LDLPVD-TPLAYVTQTTLSVDDTRGI 174
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNT--ICDATQERQDAMYKMVEEKVDLILVVGGWNSS 253
++R+F + +T IC ATQ RQ A+ ++ ++VD++LVVG NSS
Sbjct: 175 ----IDALLRRF------TDIVGPDTRDICYATQNRQAAVREL-SKQVDVLLVVGATNSS 223
Query: 254 NTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGA 313
N++ L+EI + G+ SY + + P W Q TIGIT+GA
Sbjct: 224 NSNRLREIGSESGVASYLVADGSEVKP-----------------EWFANAQ-TIGITAGA 265
Query: 314 STPDKAVEDVL 324
S P++ V++V+
Sbjct: 266 SAPEEMVKNVI 276
>gi|385228734|ref|YP_005788667.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Puno120]
gi|344335172|gb|AEN15616.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Puno120]
Length = 274
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 137/312 (43%), Gaps = 67/312 (21%)
Query: 19 ITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKN 78
I +IHN RLE+ N+ +EE K+ + K V++ G + + L NK
Sbjct: 30 IFGSLIHNAKEINRLEKNF--NVKIEEDPKK---IPKNKSVIIRTHGIPKQNLEYLKNKG 84
Query: 79 VQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEY 138
V+I D TCP+V K VE K Y ++ G +H E S+A +V
Sbjct: 85 VKITDATCPYVIKPQQIVESMSKEGYQIVLFGDINHPEVKGVISYATNQALV-------- 136
Query: 139 VCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKL 198
+N +E L++ KV + +QTT ++ KL
Sbjct: 137 ---------INSLEELQEKKLQR----------------KVALVSQTT------KQTPKL 165
Query: 199 VEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHL 258
++ + + VE E I FNTIC+AT Q A + +E VD+++VVGG SSNT L
Sbjct: 166 LQ---IASYLVERCTEVRI-FNTICNATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQL 220
Query: 259 QEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 318
IA+ SY ++ E + EL W K + GIT+GASTPD
Sbjct: 221 LSIAKQHCKDSYLVEDENEL-------------ELA----WF-KDKKLCGITAGASTPDW 262
Query: 319 AVEDVLKKVFEI 330
+E+V +K+ I
Sbjct: 263 IIENVKQKISTI 274
>gi|294102014|ref|YP_003553872.1| hydroxymethylbutenyl pyrophosphate reductase [Aminobacterium
colombiense DSM 12261]
gi|293616994|gb|ADE57148.1| hydroxymethylbutenyl pyrophosphate reductase [Aminobacterium
colombiense DSM 12261]
Length = 279
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 129/294 (43%), Gaps = 68/294 (23%)
Query: 24 IHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVD 83
IHNP + +E +A + + V + D++ + + A G + E TL ++ IVD
Sbjct: 40 IHNP---QEVERLAKKGLVVVDSP---DMIPPLSRIFIRAHGISSELFSTLQKHSIHIVD 93
Query: 84 TTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYI 143
TCP+V K ++ + Y I G +H E A
Sbjct: 94 GTCPFVKKAQERIKLLAREGYKICIIGNGNHPEIKA------------------------ 129
Query: 144 LGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTM 203
L G K +EK + G K+G+ +QTT +++ +V +
Sbjct: 130 ----LQGIVEGKATVIEKKEDVTEIG-----KTAKLGVISQTTQ---DSKVFAAIVSELA 177
Query: 204 MRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAE 263
+R + +NTIC+AT+ERQDA K+ + VD I+VVGG NS+NT L +IA
Sbjct: 178 LR-------TQEMRVYNTICNATRERQDATRKLAQF-VDGIIVVGGRNSANTGKLYDIAR 229
Query: 264 DRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPD 317
GI WI+ H E +++ WL G+ +GIT+GASTPD
Sbjct: 230 FSGIDVVWIE----------------HAEELDR-RWL-SGKARVGITAGASTPD 265
>gi|420436900|ref|ZP_14935891.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-28]
gi|393054074|gb|EJB55005.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-28]
Length = 270
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 138/312 (44%), Gaps = 67/312 (21%)
Query: 19 ITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKN 78
I +IHN RLE+ N+ +EE K+ + K V++ G +++ L NK
Sbjct: 26 IFGSLIHNAKEINRLEKNF--NVKIEEDPKK---IPKNKSVIIRTHGIPKQDLEYLKNKG 80
Query: 79 VQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEY 138
V+I D TCP+V K VE K Y ++ G +H E S+A +V
Sbjct: 81 VKITDATCPYVIKPQQIVESMSKEGYQIVLFGDINHPEVKGVISYATNQALV-------- 132
Query: 139 VCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKL 198
+N +E L++ KV + +QTT ++ KL
Sbjct: 133 ---------VNSLEELQEKKLQR----------------KVALVSQTT------KQTPKL 161
Query: 199 VEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHL 258
++ + + VE E I FNTIC+AT Q A + +E VD+++VVGG SSNT L
Sbjct: 162 LQ---IASYLVERCTEVRI-FNTICNATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQL 216
Query: 259 QEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 318
IA+ SY ++ E + EL W K + GIT+GASTPD
Sbjct: 217 LSIAKQYCKDSYLVEDENEL-------------ELA----WF-KDKKLCGITAGASTPDW 258
Query: 319 AVEDVLKKVFEI 330
+E+V +K+ I
Sbjct: 259 IIENVKQKISTI 270
>gi|406888152|gb|EKD34721.1| hypothetical protein ACD_75C02217G0001 [uncultured bacterium]
Length = 309
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 133/309 (43%), Gaps = 67/309 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V LE+ + + + +G+V + A G ++
Sbjct: 37 VYVLHEIVHNKHVISELEQSGAVFV------EHLSEIPQGEVCIFSAHGVSLAIKKKARE 90
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATAS-FAGKYIIVKNMKE 135
++ VD TCP V+ V VEK+ Y +I G + H E TA A + IV + +E
Sbjct: 91 LGLRTVDATCPLVTSVHGMVEKYHAMGYDVVIIGHHKHPEVEGTAGRVADRVHIVADEEE 150
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
A + A ++K K V QTT+ K + I
Sbjct: 151 ARTI-----------------AVMDKEK---------------VAYVTQTTLNKNDIVGI 178
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
+++ G + IC ATQ RQDA+ K + E DL+ VVG NSSN+
Sbjct: 179 LDVLQSRFPHIKGPPS---------NICFATQNRQDAV-KQLAEISDLVFVVGSKNSSNS 228
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L+E+A+ G+ ++ ID I P WL G+ IGIT+GAS
Sbjct: 229 NRLREVAKQCGVEAHLIDDYHDIDPA-----------------WL-SGRKKIGITAGASA 270
Query: 316 PDKAVEDVL 324
P++ V+ V+
Sbjct: 271 PERLVDGVI 279
>gi|393777572|ref|ZP_10365863.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ralstonia sp.
PBA]
gi|392715369|gb|EIZ02952.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ralstonia sp.
PBA]
Length = 329
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 145/335 (43%), Gaps = 78/335 (23%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
I +A K+F I++ +EI+HN V L + + ++ D V G V+ A
Sbjct: 41 IVEQALKRF-GAPIYVRHEIVHNAYVVNDLRQKGAVFV------QELDEVPTGGTVIFSA 93
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
G + + +++ D TCP V+KV V K + D ++ G H E T
Sbjct: 94 HGVSRAVREAAEARGLRVFDATCPLVTKVHVEVSKMRAQDCEIVMIGHKGHPEVEGT--- 150
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
M +A+ GG L S A L+ +P+ ++
Sbjct: 151 ---------MGQAD-------GGMLLVESVADVARLQVA--------NPE----RLAYVT 182
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFN-----TICDATQERQDAMYKMVE 238
QTT+ ET EI V + F + + IC ATQ RQDA+ K +
Sbjct: 183 QTTLSVDETREI-------------VAALKARFPAISEPKKQDICYATQNRQDAV-KFMA 228
Query: 239 EKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKEN 298
+VD ++VVG NSSN++ L+E+AE G+P+Y D+ ++I ++
Sbjct: 229 PQVDAVIVVGSPNSSNSNRLREVAERLGVPAYLADAPEQI-----------------RDE 271
Query: 299 WLPKGQITIGITSGASTPDKAVEDVLKKVFEIKRE 333
W+ G+ IG+T+GAS P+ + + V E++R
Sbjct: 272 WI-AGKRRIGVTAGASAPEVLAQSI---VTELQRR 302
>gi|385222470|ref|YP_005771603.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori SouthAfrica7]
gi|317011249|gb|ADU84996.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori SouthAfrica7]
Length = 274
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 136/312 (43%), Gaps = 67/312 (21%)
Query: 19 ITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKN 78
I +IHN RLE+ N+ +EE K+ + K V++ G +++ L NK
Sbjct: 30 IFGSLIHNAKEINRLEKNF--NVKIEEDPKK---IPKDKSVIIRTHGIPKQDLEYLKNKG 84
Query: 79 VQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEY 138
V+I D TCP+V K VE K Y ++ G +H E S+A +V
Sbjct: 85 VKITDATCPYVIKPQQIVESMSKEGYQIVLFGDINHPEVKGVISYATNQALV-------- 136
Query: 139 VCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKL 198
+N +E L++ KV + +QTT ++ KL
Sbjct: 137 ---------INSLEELQEKKLQR----------------KVALVSQTT------KQTPKL 165
Query: 199 VEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHL 258
++ + + VE E I FNTIC+AT Q A + +E VD+++VVGG SSNT L
Sbjct: 166 LQ---IASYLVERCTEVRI-FNTICNATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQL 220
Query: 259 QEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 318
IA+ SY ++ E + W K + GIT+GASTPD
Sbjct: 221 LSIAKQHCKDSYLVEDENELEMA-----------------WF-KDKKLCGITAGASTPDW 262
Query: 319 AVEDVLKKVFEI 330
+E+V +K+ I
Sbjct: 263 IIENVKQKISTI 274
>gi|134296672|ref|YP_001120407.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
vietnamiensis G4]
gi|387903016|ref|YP_006333355.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
sp. KJ006]
gi|134139829|gb|ABO55572.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
vietnamiensis G4]
gi|387577908|gb|AFJ86624.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
sp. KJ006]
Length = 326
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 143/315 (45%), Gaps = 66/315 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V + L + I VEE + V G+ V+ A G + +
Sbjct: 48 IYVRHEIVHNKYVVEDLRKKGA--IFVEE----LEEVPAGNTVIFSAHGVSKAVRDEADV 101
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ ++I D TCP V+KV V K ++ ++ G H E T + + M
Sbjct: 102 RGLRIYDATCPLVTKVHVEVAKMRQDGVDIVMIGHKGHPEVEGTMGQ-----VERGMHLV 156
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTM-LKGETEEI 195
E V D ++K + A DP+ ++ + QTT+ + E I
Sbjct: 157 ESVED-----------------VQKLELA-----DPE----RIALVTQTTLSVDDAAEII 190
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
G L K + E IC ATQ RQDA+ K + + D+++VVG NSSN+
Sbjct: 191 GAL-------KAKYPKIREP--KKQDICYATQNRQDAV-KFMAPQCDVVIVVGSPNSSNS 240
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
S L+E+AE RG+ +Y +D+ ++I P W+ G+ IG+T+GAS
Sbjct: 241 SRLREVAEKRGVAAYMVDAPEQIDPA-----------------WV-AGKRRIGVTAGASA 282
Query: 316 PDKAVEDVLKKVFEI 330
P+ + V+ ++ E+
Sbjct: 283 PEVLAQAVIARLREL 297
>gi|296272029|ref|YP_003654660.1| hydroxymethylbutenyl pyrophosphate reductase [Arcobacter
nitrofigilis DSM 7299]
gi|296096204|gb|ADG92154.1| hydroxymethylbutenyl pyrophosphate reductase [Arcobacter
nitrofigilis DSM 7299]
Length = 277
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 127/278 (45%), Gaps = 59/278 (21%)
Query: 50 FDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIH 109
D V D +++ G ++ L K+ ++++ TCP+V+ V+K +Y+ +I
Sbjct: 56 LDEVKDNDTIIIRTHGIPKFDLKNLKAKDAKVINATCPFVTTPQQIVKKMSAEEYSIVIF 115
Query: 110 GKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKG 169
G H E + S+A K+ + V + +LN KFK +
Sbjct: 116 GDKDHPEVLGVQSYA---------KDQDDVFVILEPEDLNNI---------KFKYS---- 153
Query: 170 FDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQER 229
K+ QTT K + EI T++ K N+ FNTICDAT E
Sbjct: 154 --------KIATIAQTTKKKEKYLEIVN----TLIPK------NKEVRVFNTICDATFEN 195
Query: 230 QDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLM 289
QDA ++ +E VD+++V+GG NSSNT L I+++ I SY ++ E+ + P
Sbjct: 196 QDAARELSKE-VDIMIVIGGKNSSNTKQLLNISKENCIDSYLLEDERELDP--------- 245
Query: 290 HGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKV 327
W K + GIT+GASTPD ++ V+ +V
Sbjct: 246 --------KWF-KNKKLCGITAGASTPDWVIQKVVNQV 274
>gi|68165328|gb|AAY87624.1| LytB [Vibrio cholerae]
Length = 280
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 142/318 (44%), Gaps = 67/318 (21%)
Query: 14 EEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVT 73
+ I++ +E++HN V + L++ + + ++ + V ++V+ A G +
Sbjct: 22 QPPIYVRHEVVHNRFVVEGLKQRGARFV------EELNEVPDDNIVIFSAHGVSQAVRQE 75
Query: 74 LNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNM 133
+++ + D TCP V+KV V + + ++ G H E T G+Y
Sbjct: 76 AKERSLTVFDATCPLVTKVHMEVARASRKHMEVVLIGHAGHPEVEGTM---GQY------ 126
Query: 134 KEAEYVCDYILGGELNGSSSTKEAFL-EKFKKAVS---KGFDPDVDLVKVGIANQTTMLK 189
+S T +L EK + VS K DP + +QTT+
Sbjct: 127 -----------------ASDTGGMYLVEKPEDVVSLQAKVKDPS----NLHYVSQTTLSV 165
Query: 190 GETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGG 249
ET ++ + + + G + IC ATQ RQDA+ +++ E+VD+++VVG
Sbjct: 166 DETADVIDELRRVFPKIQGPRK--------DDICYATQNRQDAV-RILAEQVDVMVVVGS 216
Query: 250 WNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGI 309
NSSN++ L+E+AE G P Y ID + I P W Q+ IG+
Sbjct: 217 KNSSNSTRLKELAEKLGTPGYLIDCPQDIDP-----------------EWFVDAQL-IGV 258
Query: 310 TSGASTPDKAVEDVLKKV 327
T+GAS P++ V +L ++
Sbjct: 259 TAGASAPEELVNQILDRI 276
>gi|320103812|ref|YP_004179403.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Isosphaera
pallida ATCC 43644]
gi|319751094|gb|ADV62854.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Isosphaera
pallida ATCC 43644]
Length = 316
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 143/314 (45%), Gaps = 70/314 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGA--AVEEMVTL 74
+++ +EI+HN V +R + V I VE+ + V +G ++ A G A+ E+
Sbjct: 33 LYVYHEIVHNKWVVERFQRRGV--IFVED----LNDVPEGSPLLFSAHGVSPAIRELS-- 84
Query: 75 NNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA-GKYIIVKNM 133
+ +Q++D TCP V+KV K+ K YT I+ G H+E V T A + ++V+++
Sbjct: 85 RQRRLQVIDATCPLVTKVHLEAVKYAKLGYTIILIGHEGHDEVVGTMGEAPDRMVLVESV 144
Query: 134 KEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETE 193
++ E L K A+L QTT+ +
Sbjct: 145 EDVE---------RLEVPDPNKLAYL-----------------------TQTTL----SV 168
Query: 194 EIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSS 253
+ +V + RKF H + IC ATQ RQ+A+ ++ + DL+LV+G NSS
Sbjct: 169 DDANIVIAALKRKFPAI----HHPPKDDICYATQNRQEAIRELAPQA-DLVLVIGSQNSS 223
Query: 254 NTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGA 313
N+ L EIA G P++ ID + P W +G T+ +++GA
Sbjct: 224 NSLRLAEIANLLGTPAHLIDGVGELQP-----------------EWF-EGVQTVLVSAGA 265
Query: 314 STPDKAVEDVLKKV 327
S P+ V+D++K +
Sbjct: 266 SAPEDVVQDLVKHL 279
>gi|218282288|ref|ZP_03488587.1| hypothetical protein EUBIFOR_01169 [Eubacterium biforme DSM 3989]
gi|218216723|gb|EEC90261.1| hypothetical protein EUBIFOR_01169 [Eubacterium biforme DSM 3989]
Length = 299
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 144/319 (45%), Gaps = 75/319 (23%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGD--VVVL 61
+A + R Q+P++KI I ++HN V K L+ ++ I + K +++++++ +V+
Sbjct: 24 VAKKTRIQYPDQKITILGNLVHNQYVKKALQSYSIDTIE-NKNKTRYELLDEISEGIVIF 82
Query: 62 PAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATA 121
A G + + K + +VD +CP+V + V+++ DYT GK H E
Sbjct: 83 TAHGVSPKVYEKAKEKGLILVDASCPFVLQTQKIVKQYLDEDYTIFYIGKNKHPEA---- 138
Query: 122 SFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGI 181
E+ Y + +K +L + KK + P+VD K+ +
Sbjct: 139 -------------ESIY-------------TMSKNVYLIEPKKEI-----PNVDTNKIFV 167
Query: 182 ANQTTM----LKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMV 237
NQTTM LK ++I +L + + IC+AT+ RQ A+ +
Sbjct: 168 TNQTTMSIYELKDTFDQIKQLYPSAIFH--------------DEICNATRVRQQAILDL- 212
Query: 238 EEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKE 297
E VD ++VVG S+NT L +I + GIP + + E ++K+
Sbjct: 213 -ENVDCLIVVGDPTSNNTQKLVDIGKKAGIPD---------------VFSIQTVEDIDKK 256
Query: 298 NWLPKGQITIGITSGASTP 316
++ P TI ITSGASTP
Sbjct: 257 DFEPYS--TIAITSGASTP 273
>gi|237745563|ref|ZP_04576043.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Oxalobacter
formigenes HOxBLS]
gi|229376914|gb|EEO27005.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Oxalobacter
formigenes HOxBLS]
Length = 316
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 138/310 (44%), Gaps = 68/310 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V RL+ I +EE D V G V++ A G +
Sbjct: 33 VYVRHEIVHNTHVVNRLKNRGA--IFIEE----LDEVPSGSVLIFSAHGVSKAIRQDAER 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATA--SFAGKYIIVKNMK 134
+++++ D TCP V+KV V K +K + I+ G H E T S +G Y+I
Sbjct: 87 RHLRLFDATCPLVTKVHAEVAKMRKDNCEIIVIGHKGHPEVEGTMGQSDSGMYLI----- 141
Query: 135 EAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEE 194
NG +EK K +P+ ++ +QTT+ +T E
Sbjct: 142 --------------NGIDD-----IEKLKVE-----NPE----RLAYVSQTTLSIDDTTE 173
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
I ++K + + IC AT RQ A+ ++ + K LILVVG NSSN
Sbjct: 174 IIAALKKRFPSIVEPKKAD--------ICYATTNRQKAVRRLAK-KTGLILVVGSPNSSN 224
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
++ L+E+AE G +Y +D+ I P +WL G T+GIT+GAS
Sbjct: 225 SNRLREMAEKNGAIAYMVDNASEIDP-----------------DWL-AGHDTVGITAGAS 266
Query: 315 TPDKAVEDVL 324
P+ V +V+
Sbjct: 267 APEVLVREVV 276
>gi|323529047|ref|YP_004231199.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia sp.
CCGE1001]
gi|407709889|ref|YP_006793753.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
phenoliruptrix BR3459a]
gi|323386049|gb|ADX58139.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia sp.
CCGE1001]
gi|407238572|gb|AFT88770.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
phenoliruptrix BR3459a]
Length = 314
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 133/311 (42%), Gaps = 70/311 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V L + + + ++ D V +G V + A G A
Sbjct: 33 VYVRHEIVHNRHVVDNLRQKGARFV------EELDEVPQGAVAIFSAHGVAQTVERDAEA 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKE 135
+ + ++D TCP V+KV ++ T I+ G H E T GK ++V++ E
Sbjct: 87 RGLDVLDATCPLVTKVHVQGRQYVAAGRTLILIGHAGHPEVEGTIGQIPGKVLLVQSEAE 146
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
E+ D VD + QTT+ +T I
Sbjct: 147 VEH-------------------------------LDLPVD-TPLAYVTQTTLSVDDTRGI 174
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNT--ICDATQERQDAMYKMVEEKVDLILVVGGWNSS 253
++RKF + +T IC ATQ RQ A+ ++ ++VD++LVVG NSS
Sbjct: 175 ----IDALLRKF------TDIVGPDTRDICYATQNRQAAVREL-SKQVDVLLVVGATNSS 223
Query: 254 NTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGA 313
N++ L+EI + G+ SY + + P W Q TIGIT+GA
Sbjct: 224 NSNRLREIGSESGVASYLVADGSEVKP-----------------EWFANAQ-TIGITAGA 265
Query: 314 STPDKAVEDVL 324
S P++ V++V+
Sbjct: 266 SAPEEMVKNVI 276
>gi|384889664|ref|YP_005763966.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori v225d]
gi|297380230|gb|ADI35117.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori v225d]
Length = 274
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 138/312 (44%), Gaps = 67/312 (21%)
Query: 19 ITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKN 78
I +IHN RLE+ N+ +EE K+ + K V++ G +++ L NK
Sbjct: 30 IFGSLIHNAKEINRLEKNF--NVKIEEDPKK---IPKNKSVIIRTHGIPKQDLEYLKNKG 84
Query: 79 VQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEY 138
V+I D TCP+V K VE K Y ++ G +H E S+A +V
Sbjct: 85 VKITDATCPYVIKPQQIVESMSKEGYQIVLFGDINHPEVKGVISYATNQALV-------- 136
Query: 139 VCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKL 198
+N +E L++ KV + +QTT ++ KL
Sbjct: 137 ---------VNSLEELQEKKLQR----------------KVALVSQTT------KQTPKL 165
Query: 199 VEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHL 258
++ + + VE E I FNTIC+AT Q A + +E VD+++VVGG SSNT L
Sbjct: 166 LQ---IASYLVERCTEVRI-FNTICNATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQL 220
Query: 259 QEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 318
IA+ SY ++ E + EL W K + GIT+GASTPD
Sbjct: 221 LSIAKQHCEDSYLVEDENEL-------------ELA----WF-KDKKLCGITAGASTPDW 262
Query: 319 AVEDVLKKVFEI 330
+E+V +K+ I
Sbjct: 263 IIENVKQKISTI 274
>gi|86748852|ref|YP_485348.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Rhodopseudomonas palustris HaA2]
gi|86571880|gb|ABD06437.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Rhodopseudomonas palustris HaA2]
Length = 314
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 138/317 (43%), Gaps = 70/317 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAA--VEEMVTL 74
+++ +EI+HN V + L+ A I VEE V V V A G A +EE
Sbjct: 39 VYVRHEIVHNKYVVESLK--AKGAIFVEE----LSEVPPKAVTVFSAHGVARSIEEEAA- 91
Query: 75 NNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-ASFAGKYIIVKNM 133
++ + +++ TCP V+KV +++ T I+ G H E T G ++V+N+
Sbjct: 92 -SRGLPVLNATCPLVTKVHNQGKRYTAKGRTLILIGHAGHPEVEGTMGQVPGPVLLVQNL 150
Query: 134 KEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETE 193
+ L S T A++ QTT+ +T
Sbjct: 151 DDV---------AALTLPSDTPVAYI-----------------------TQTTLSVDDTR 178
Query: 194 EIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSS 253
+I + K G + IC ATQ RQ A+ M + VDLILVVG NSS
Sbjct: 179 DIIAALSKRFSDIQGPDT--------RDICYATQNRQSAVRAM-SKLVDLILVVGANNSS 229
Query: 254 NTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGA 313
N++ L+EI + GIPSY I + P +WL +G+ +GIT+GA
Sbjct: 230 NSNRLREIGTEAGIPSYLISDGSELNP-----------------DWL-EGKKAVGITAGA 271
Query: 314 STPDKAVEDVLKKVFEI 330
S P+ V+DV++ + I
Sbjct: 272 SAPEVLVDDVIEALRRI 288
>gi|90416605|ref|ZP_01224536.1| hydroxymethylbutenyl pyrophosphate reductase [gamma proteobacterium
HTCC2207]
gi|90331804|gb|EAS47032.1| hydroxymethylbutenyl pyrophosphate reductase [gamma proteobacterium
HTCC2207]
Length = 311
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 139/321 (43%), Gaps = 74/321 (23%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L + + D + +V+ A G ++
Sbjct: 33 IYVRHEVVHNKFVVDDLRSRGAVFV------DELDEIPDDVIVIFSAHGVSLAVQEEARR 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++++ D TCP V+KV V K S++ G H E T G+Y
Sbjct: 87 RSLKVFDATCPLVTKVHMEVAKFSLDGMESVLIGHAGHPEVEGT---MGQY--------- 134
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSK--GFDPDVDLVKVGIANQTTMLKGETEE 194
DY GG + +L + + V+K DP ++ QTT+ +T
Sbjct: 135 ----DYSQGGNM---------YLVEDESDVAKLEVKDPS----RLAFVTQTTLSMDDTAR 177
Query: 195 IGKLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGG 249
+ ++ + E F + + IC ATQ RQDA+ ++ E DLILVVG
Sbjct: 178 V-------------IDALREKFPAIEGPRKDDICYATQNRQDAVKQLAIES-DLILVVGS 223
Query: 250 WNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGI 309
SSN++ L+E+AE G +Y ID GP + A WL + + IGI
Sbjct: 224 VASSNSNRLRELAERCGCTAYLID-----GPEDIDA------------QWLKQTK-AIGI 265
Query: 310 TSGASTPDKAVEDVLKKVFEI 330
T+GAS PD V DV+ ++ E+
Sbjct: 266 TAGASAPDVLVRDVISRLVEL 286
>gi|194290591|ref|YP_002006498.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Cupriavidus
taiwanensis LMG 19424]
gi|193224426|emb|CAQ70437.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase, 4Fe-4S
protein [Cupriavidus taiwanensis LMG 19424]
Length = 321
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 137/320 (42%), Gaps = 76/320 (23%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V L + + D V G V+ A G + E
Sbjct: 42 IYVRHEIVHNAYVVADLRRKGAVFV------GELDEVPAGATVIFSAHGVSREVREDAAR 95
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA-GKYIIVKNMKE 135
+ + + D TCP V+KV V K + ++ G H E T A G ++V+++ +
Sbjct: 96 RGLHVFDATCPLVTKVHVEVSKLRAQGCEIVMIGHRGHPEVEGTMGQANGGMVLVESVDD 155
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
+ L + ++ A++ QTT+ ET EI
Sbjct: 156 VQ---------ALQIADPSRLAYV-----------------------TQTTLSVDETSEI 183
Query: 196 GKLVEKTMMRKFGVENVNEHFISFN-----TICDATQERQDAMYKMVEEKVDLILVVGGW 250
V + F IC ATQ RQDA+ K + +V++++VVG
Sbjct: 184 -------------VAALKARFPEIREPKKQDICYATQNRQDAV-KFMAPQVEVVIVVGSP 229
Query: 251 NSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGIT 310
NSSN++ L+E+AE G+P+Y +D+ +++ P W+ G+ IG+T
Sbjct: 230 NSSNSNRLRELAERLGVPAYMVDAPEQVRP-----------------EWI-AGKRRIGLT 271
Query: 311 SGASTPDKAVEDVLKKVFEI 330
+GAS P+ + +++++ E+
Sbjct: 272 AGASAPEALAQSIVERLREL 291
>gi|189425205|ref|YP_001952382.1| hydroxymethylbutenyl pyrophosphate reductase [Geobacter lovleyi SZ]
gi|238692112|sp|B3E441.1|ISPH_GEOLS RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|189421464|gb|ACD95862.1| hydroxymethylbutenyl pyrophosphate reductase [Geobacter lovleyi SZ]
Length = 280
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 147/327 (44%), Gaps = 71/327 (21%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+A+EA + ++K + IIH+P V +LEEM V + K V+ G V++ +
Sbjct: 21 MAFEAAGK--DQKTFTLGPIIHSPQVVNKLEEMGVGVV------KDLSGVSNG-TVIIRS 71
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
G EM + K +++VD TCP+V K V+ + Y ++ G H E S+
Sbjct: 72 HGVLASEMDEAHQKQLEVVDATCPFVKKAQEHVQYLSEAGYDVLVVGDADHPEVQGIVSY 131
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
KE YV A ++ K+ G K+G+
Sbjct: 132 G---------KEKVYVV----------------ASGDQVKQLPKMG--------KMGVVA 158
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTT ++ + K V +R+ G V +NTICDAT RQ ++ ++ VD
Sbjct: 159 QTT----QSFDNLKSVVTECLRRGGEVRV------YNTICDATAVRQQEATELAQQ-VDC 207
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG+NS+NT L EI + +Y I++ I +W +G
Sbjct: 208 MIVIGGFNSANTRRLAEICTEIQPRTYHIETAAEIDC-----------------SWF-QG 249
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEI 330
T+G+T+GASTP +++V+ ++ ++
Sbjct: 250 VDTVGVTAGASTPKWIIDEVMNRLDQV 276
>gi|385227239|ref|YP_005787163.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori SNT49]
gi|344332152|gb|AEN17182.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori SNT49]
Length = 274
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 138/312 (44%), Gaps = 67/312 (21%)
Query: 19 ITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKN 78
I +IHN RLE+ N+ +EE K+ + K V++ G +++ L NK
Sbjct: 30 IFGSLIHNAKEINRLEKNF--NVKIEEDPKK---IPKNKSVIIRTHGIPKQDLEYLKNKG 84
Query: 79 VQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEY 138
V+I D TCP+V K VE K Y ++ G +H E S+A +V
Sbjct: 85 VKITDATCPYVIKPQQIVESMSKEGYQIVLFGDINHPEVKGVISYATNQALV-------- 136
Query: 139 VCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKL 198
+N +E L++ KV + +QTT ++ KL
Sbjct: 137 ---------VNSLEELQEKKLQR----------------KVALVSQTT------KQTPKL 165
Query: 199 VEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHL 258
++ + + VE E I FNTIC+AT Q A + +E VD+++VVGG SSNT L
Sbjct: 166 LQ---IASYLVERCTEVRI-FNTICNATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQL 220
Query: 259 QEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 318
IA+ SY ++ E + EL W K + GIT+GASTPD
Sbjct: 221 LSIAKQHCEDSYLVEDENEL-------------EL----EWF-KDKKLCGITAGASTPDW 262
Query: 319 AVEDVLKKVFEI 330
+E+V +K+ I
Sbjct: 263 IIENVKQKISTI 274
>gi|153801872|ref|ZP_01956458.1| hydroxymethylbutenyl pyrophosphate reductase [Vibrio cholerae
MZO-3]
gi|124122583|gb|EAY41326.1| hydroxymethylbutenyl pyrophosphate reductase [Vibrio cholerae
MZO-3]
Length = 320
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 141/315 (44%), Gaps = 67/315 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L++ + + ++ + V ++V+ A G +
Sbjct: 37 IYVRHEVVHNRFVVEGLKQRGARFV------EELNEVPDDNIVIFSAHGVSQAVRQEAKE 90
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++ + D TCP V+KV V + + ++ G H E T G+Y
Sbjct: 91 RSLTVFDATCPLVTKVHMEVARASRKHMEVVLIGHAGHPEVEGTM---GQY--------- 138
Query: 137 EYVCDYILGGELNGSSSTKEAFL-EKFKKAVS---KGFDPDVDLVKVGIANQTTMLKGET 192
+S T +L EK + VS K DP + +QTT+ ET
Sbjct: 139 --------------ASDTGGMYLVEKPEDVVSLQAKVKDPS----NLHYVSQTTLSVDET 180
Query: 193 EEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNS 252
++ + + + G + IC ATQ RQDA+ +++ E+VD+++VVG NS
Sbjct: 181 ADVIDELRRVFPKIQGPRK--------DDICYATQNRQDAV-RILAEQVDVMVVVGSKNS 231
Query: 253 SNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSG 312
SN++ L+E+AE G P Y ID + I P W Q+ IG+T+G
Sbjct: 232 SNSTRLKELAEKLGTPGYLIDCPQDIDP-----------------EWFVDAQL-IGVTAG 273
Query: 313 ASTPDKAVEDVLKKV 327
AS P++ V +L ++
Sbjct: 274 ASAPEELVNQILDRI 288
>gi|357403779|ref|YP_004915703.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Methylomicrobium alcaliphilum 20Z]
gi|351716444|emb|CCE22104.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Methylomicrobium alcaliphilum 20Z]
Length = 314
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 138/311 (44%), Gaps = 59/311 (18%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN TV L++ I +E+ V G ++ A G +
Sbjct: 33 IYVRHEVVHNRTVVDGLKDKGA--IFIED----LSDVPVGSYLIFSAHGVSKRVQEEAEE 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+N+ + D TCP V+KV V KH K D I+ G H E T M +
Sbjct: 87 RNLTVFDATCPLVTKVHLQVAKHAKQDREVILIGHAGHPEVEGT------------MGQY 134
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
E + NG E + K V+ +P+ + QTT+ +T
Sbjct: 135 EKCTE-------NGGIYLVETPEDVAKLKVN---NPN----NLAYVTQTTLSMTDT---- 176
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
K++ + +F ++ E + IC ATQ RQDA+Y + K DLILVVG NSSN++
Sbjct: 177 KVMVDALRARF--SSIQEQ--KKDDICYATQNRQDAVYDLAN-KTDLILVVGSPNSSNSN 231
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L+EIAE G P+Y ID+ + W G +G+T+GAS P
Sbjct: 232 RLREIAEQLGKPAYLIDTANDM-----------------SREWF-DGITAVGVTAGASAP 273
Query: 317 DKAVEDVLKKV 327
+ V++V+ ++
Sbjct: 274 EVLVQEVINQL 284
>gi|251778389|ref|ZP_04821309.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
botulinum E1 str. 'BoNT E Beluga']
gi|243082704|gb|EES48594.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
botulinum E1 str. 'BoNT E Beluga']
Length = 635
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 150/333 (45%), Gaps = 82/333 (24%)
Query: 15 EKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTL 74
+KI+ +IHN V K LE+ + +I +E D +NK DV+V+ + G + E + L
Sbjct: 32 KKIYTLGPLIHNNDVVKFLEKNNIYSIELE----NIDTLNKDDVIVIRSHGVSEEVLNLL 87
Query: 75 NNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA-GKYIIVKNM 133
+++ D TCP+V+K+ V K+ K Y +I G +H E + + + II KN
Sbjct: 88 QKNQLKVKDATCPFVTKIQKKVNKYYKLGYNIVILGDANHPEVIGINGWCNNEAIISKN- 146
Query: 134 KEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETE 193
GE F+ DV K+ + +QTT E
Sbjct: 147 ------------GE----------------------FNEDV-YAKICVVSQTTEKAANWE 171
Query: 194 EIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSS 253
T+++ + ++ ++FNTIC AT RQ + K+ +E V+ ++V+GG NSS
Sbjct: 172 --------TLIKNVSAK--SKEVLAFNTICAATDVRQRSTNKLSKE-VEAMVVIGGKNSS 220
Query: 254 NTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQIT-----IG 308
NT+ L +IA+ + +H +E N LPK I +G
Sbjct: 221 NTTKLYQIAKQNCDDT-------------------IH---IENVNELPKEFINNNINKVG 258
Query: 309 ITSGASTPD---KAVEDVLKKVFEIKREEALQL 338
IT+GASTPD + V ++ IK ++ L L
Sbjct: 259 ITAGASTPDWIIREVIGIMSNTENIKNDDQLSL 291
>gi|188527835|ref|YP_001910522.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Shi470]
gi|238691939|sp|B2UUG0.1|ISPH_HELPS RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|188144075|gb|ACD48492.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Shi470]
Length = 274
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 134/312 (42%), Gaps = 67/312 (21%)
Query: 19 ITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKN 78
I +IHN RLE+ N+ +EE K+ + K V++ G +++ L NK
Sbjct: 30 IFGSLIHNAKEINRLEKNF--NVKIEEDPKK---IPKNKSVIIRTHGIPKQDLEYLKNKG 84
Query: 79 VQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEY 138
V+I D TCP+V K VE K Y ++ G +H E S+A +V
Sbjct: 85 VKITDATCPYVIKPQQIVESMSKEGYQIVLFGDINHPEVKGVISYATNQALV-------- 136
Query: 139 VCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKL 198
+N +E L++ KV + +QTT + +I
Sbjct: 137 ---------INSLEELQEKKLQR----------------KVALVSQTTKQTPQLLQIAS- 170
Query: 199 VEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHL 258
+ VE E I FNTIC+AT Q A + +E VD+++VVGG SSNT L
Sbjct: 171 --------YLVERCTEVRI-FNTICNATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQL 220
Query: 259 QEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 318
IA+ SY ++ E + EL W K + GIT+GASTPD
Sbjct: 221 LSIAKQHCEDSYLVEDENEL-------------ELA----WF-KNKKLCGITAGASTPDW 262
Query: 319 AVEDVLKKVFEI 330
+E+V +K+ I
Sbjct: 263 IIENVKQKISTI 274
>gi|300114035|ref|YP_003760610.1| hydroxymethylbutenyl pyrophosphate reductase [Nitrosococcus
watsonii C-113]
gi|299539972|gb|ADJ28289.1| hydroxymethylbutenyl pyrophosphate reductase [Nitrosococcus
watsonii C-113]
Length = 320
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 142/323 (43%), Gaps = 66/323 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V + L+ V I E+ + G V + A G + + T
Sbjct: 33 IYVLHEIVHNQHVVEDLQRRGV--IFTED----LASIPTGSVTIFSAHGVSTAVVETAKK 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEK-HKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKE 135
++Q++D TCP V+KV +K +++GD II G H E T +K
Sbjct: 87 NDLQVIDATCPLVTKVHLQAKKYYRQGDELIII-GHAGHPEVEGTRG---------RVKG 136
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
YV D + A +EK DP+ + QTT+ +T ++
Sbjct: 137 TVYVLDSV-------------AEVEKLTVK-----DPE----HIAYVTQTTLSIDDTRDV 174
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
++K + G + IC ATQ RQ+A+ +M +E VD++LVVG NSSN+
Sbjct: 175 VDALKKRFPKIHGP--------GLDDICYATQNRQNAVREMSKE-VDILLVVGARNSSNS 225
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L+E E GI ++ I K + +W Q +GIT+GAST
Sbjct: 226 NRLREAGEQNGITAHLIQDAKDL-----------------DSSWFTP-QSRVGITAGAST 267
Query: 316 PDKAVEDVLKKVFEIKREEALQL 338
P+ V+ VL ++ EE L
Sbjct: 268 PEILVQGVLNELRNYGVEEVRDL 290
>gi|420475652|ref|ZP_14974322.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-21]
gi|393092155|gb|EJB92779.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Hp H-21]
Length = 274
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 138/312 (44%), Gaps = 67/312 (21%)
Query: 19 ITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKN 78
I +IHN RLE+ N+ +EE K+ + K V++ G +++ L NK
Sbjct: 30 IFGSLIHNAKEINRLEKNF--NVKIEEDPKK---IPKNKSVIIRTHGIPKQDLEYLKNKG 84
Query: 79 VQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEY 138
V+I D TCP+V K VE K Y ++ G +H E S+A +V
Sbjct: 85 VKITDATCPYVIKPQQIVESMSKEGYQIVLFGDINHPEVKGVISYATNQALV-------- 136
Query: 139 VCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKL 198
+N +E L++ KV + +QTT ++ KL
Sbjct: 137 ---------INSLEELQEKKLQR----------------KVALVSQTT------KQTPKL 165
Query: 199 VEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHL 258
++ + + VE E I FNTIC+AT Q A + +E VD+++VVGG SSNT L
Sbjct: 166 LQ---IASYLVERCTEVRI-FNTICNATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQL 220
Query: 259 QEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 318
IA+ SY ++ E + EL W K + GIT+GASTPD
Sbjct: 221 LIIAKQHCKDSYLVEDENEL-------------ELA----WF-KDKRLCGITAGASTPDW 262
Query: 319 AVEDVLKKVFEI 330
+E+V +K+ I
Sbjct: 263 IIENVKQKISTI 274
>gi|295677430|ref|YP_003605954.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia sp.
CCGE1002]
gi|295437273|gb|ADG16443.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia sp.
CCGE1002]
Length = 319
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 148/325 (45%), Gaps = 70/325 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V + L + I + + V G+ V+ A G + +
Sbjct: 43 IYVRHEIVHNAYVVEDLRKKGAIFI------ENLEEVPAGNTVIFSAHGVSKAVRSEAES 96
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYI-IVKNMKE 135
+ +++ D TCP V+KV V K ++ + ++ G H E T A + + +V+++++
Sbjct: 97 RGLRVYDATCPLVTKVHIEVAKMRQDGFDIVMIGHKGHPEVEGTMGQAAEGMHLVEDIED 156
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTM-LKGETEE 194
+ + + DP+ ++ QTT+ + E
Sbjct: 157 VQAL----------------------------QLADPE----RIAFVTQTTLSVDDAAEI 184
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
IG L K ++ E IC ATQ RQDA+ K + + DL++VVG NSSN
Sbjct: 185 IGAL-------KAKYPSIREP--KKQDICYATQNRQDAV-KFMAPQCDLVIVVGSPNSSN 234
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
++ L+E+AE G+P+Y +DS +I P W+ +G+ IG+T+GAS
Sbjct: 235 SNRLRELAEKLGVPAYMVDSPDQIDP-----------------VWV-EGKRRIGVTAGAS 276
Query: 315 TPDKAVEDVLKKVFE--IKREEALQ 337
P+ + V+ ++ E ++ ALQ
Sbjct: 277 APEVLAQAVIARLRELGVRNVRALQ 301
>gi|83648572|ref|YP_437007.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Hahella
chejuensis KCTC 2396]
gi|123530802|sp|Q2S9U2.1|ISPH_HAHCH RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|83636615|gb|ABC32582.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Hahella
chejuensis KCTC 2396]
Length = 317
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 141/325 (43%), Gaps = 64/325 (19%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L + + D V G +V+ A G + E +
Sbjct: 33 IYVRHEVVHNRFVVEGLRTRGAVFV------DELDEVPDGALVIFSAHGVSQEVRQEADA 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V ++ + I+ G H E T G+Y
Sbjct: 87 RGLKVFDATCPLVTKVHMEVMRYSRDGRECILIGHAGHPEVEGTM---GQY--------- 134
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGF--DPDVDLVKVGIANQTTMLKGETEE 194
D GG + +L + ++ V + DP + QTT+ +T
Sbjct: 135 ----DSANGGAI---------YLVEDEEDVGRLIVNDPG----NLAYVTQTTLSVDDTAR 177
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
+ + +T G + IC ATQ RQDA+ K + D++LVVG NSSN
Sbjct: 178 VIDALRQTFPEIKGPRK--------DDICYATQNRQDAV-KELAATCDVVLVVGSVNSSN 228
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
++ L+E+AE P+Y ID I P +W G ++G+T+GAS
Sbjct: 229 SNRLRELAERMQTPAYLIDGAHEIQP-----------------DWF-AGAASVGVTAGAS 270
Query: 315 TPDKAVEDVLKKVFEIKREEALQLA 339
P+ V+ V++++ E+ E ++A
Sbjct: 271 APEVLVQQVVQRLRELGGEAPAEIA 295
>gi|378717101|ref|YP_005281990.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Gordonia
polyisoprenivorans VH2]
gi|375751804|gb|AFA72624.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase IspH [Gordonia
polyisoprenivorans VH2]
Length = 317
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 129/314 (41%), Gaps = 75/314 (23%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ EI+HN V L E + + D V +G +VV A G + E T
Sbjct: 37 VYVRKEIVHNRHVVDTLAERGAIFV------GETDEVPEGAIVVFSAHGVSPEVHRTAAQ 90
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+N++ +D TCP V+KV ++ + DY ++ G HEE TA A ++I
Sbjct: 91 RNLKTIDATCPLVTKVHQEAKRFARDDYDILLIGHEGHEEVEGTAGEAPEHI-------- 142
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
+ G + + S + D KV +QTT+ ET E
Sbjct: 143 ----QLVDGPDAVDTVSVR-------------------DESKVIWLSQTTLSVDETMET- 178
Query: 197 KLVEKTMMRKFGVENVNEHFISFNT-----ICDATQERQDAMYKMVEEKVDLILVVGGWN 251
V + E F N IC ATQ RQ A+ M K DL++VVG N
Sbjct: 179 ------------VRRLRERFPELNDPPSDDICYATQNRQVAVKAMAP-KCDLVIVVGSKN 225
Query: 252 SSNTSHLQEIAEDRGI-PSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGIT 310
SSN+ L E+A G SY +D + I P WL G T+GIT
Sbjct: 226 SSNSVRLVEVALQNGASASYLVDYAREIDPA-----------------WL-DGVETVGIT 267
Query: 311 SGASTPDKAVEDVL 324
SGAS P+ V V+
Sbjct: 268 SGASVPEVLVRGVI 281
>gi|333921058|ref|YP_004494639.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Amycolicicoccus
subflavus DQS3-9A1]
gi|333483279|gb|AEF41839.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Amycolicicoccus
subflavus DQS3-9A1]
Length = 328
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 137/310 (44%), Gaps = 65/310 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ EI+HN V + L E + VEE D V +G +VV A G +
Sbjct: 49 VYVRKEIVHNRHVVETLSERGA--VFVEE----VDEVPEGALVVFSAHGVSPAVHEAAGT 102
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ ++ +D TCP V+KV ++ + D+ ++ G HEE TA A ++ +
Sbjct: 103 RELRTIDATCPLVTKVHQEAKRFARDDFDILLIGHEGHEEVEGTAGEAPSHVQL------ 156
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
++G S + + D +V +QTT+ ET E
Sbjct: 157 -----------VDGPDSVDKVEVR--------------DESRVVWLSQTTLSVDETMET- 190
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
VE+ R G+++ + IC ATQ RQ A+ M E DL++VVG NSSN+
Sbjct: 191 --VERLRKRFPGLQDPPS-----DDICYATQNRQVAVKAMAPE-CDLVIVVGSRNSSNSL 242
Query: 257 HLQEIAEDRGI-PSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
L E+A D G SY +D K I P WL +G T+G+TSGAS
Sbjct: 243 RLVEVALDAGARTSYLVDYAKEINPA-----------------WL-EGVETVGVTSGASV 284
Query: 316 PDKAVEDVLK 325
P+ V+ VL+
Sbjct: 285 PEILVDGVLQ 294
>gi|187932428|ref|YP_001885998.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
botulinum B str. Eklund 17B]
gi|187720581|gb|ACD21802.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
botulinum B str. Eklund 17B]
Length = 635
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 154/346 (44%), Gaps = 89/346 (25%)
Query: 5 AYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAF 64
A + +KQ E+KI+ +IHN V K LE+ + +I +E +NK DV+V+ +
Sbjct: 23 AIKIQKQ-AEKKIYTLGPLIHNNDVVKFLEKNNIYSIELE----NITTLNKDDVIVIRSH 77
Query: 65 GAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA 124
G + E + L +++ D TCP+V+ + V K+ K Y +I G +H E + +
Sbjct: 78 GVSEEVLNLLQKNELKVKDATCPFVTNIQKKVNKYYKLGYNIVILGDSNHPEVIGINGWC 137
Query: 125 -GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
+ II KN GE FD DV KV + +
Sbjct: 138 NNEAIISKN-------------GE----------------------FDDDVP-AKVCVVS 161
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVN---EHFISFNTICDATQERQDAMYKMVEEK 240
QTT EK + ++NV+ + ++FNTIC AT RQ + K+ +E
Sbjct: 162 QTT-------------EKVANWETLIKNVSSKAKEVLAFNTICAATDVRQRSTSKLSKE- 207
Query: 241 VDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWL 300
V+ ++V+GG NSSNT+ L +IA+ +H +E N L
Sbjct: 208 VEAMVVIGGKNSSNTTKLYQIAKQN-------------------CDNTIH---IENVNEL 245
Query: 301 PKGQIT-----IGITSGASTPD---KAVEDVLKKVFEIKREEALQL 338
PK I +GIT+GASTPD + V ++ IK ++ L L
Sbjct: 246 PKDFINNNINKVGITAGASTPDWIIREVIGIMSNTENIKNDDQLSL 291
>gi|109947060|ref|YP_664288.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
acinonychis str. Sheeba]
gi|109714281|emb|CAJ99289.1| lytB [Helicobacter acinonychis str. Sheeba]
Length = 270
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 136/312 (43%), Gaps = 67/312 (21%)
Query: 19 ITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKN 78
I +IHN RLE+ N+ +EE K+ + K V++ G +++ L NK
Sbjct: 26 IFGSLIHNAKEINRLEKNF--NVKIEEDPKK---IPKDKSVIIRTHGIPKQDLEYLKNKG 80
Query: 79 VQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEY 138
V+I D TCP+V K VE K Y ++ G +H E S+A +V
Sbjct: 81 VKITDATCPYVIKPQQIVESMSKEGYQIVLFGDINHPEVKGVISYATNQALV-------- 132
Query: 139 VCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKL 198
+N +E L++ KV + +QTT ++ KL
Sbjct: 133 ---------VNSLEKLQEKKLQR----------------KVALVSQTT------KQTPKL 161
Query: 199 VEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHL 258
++ + + VE E I FNTIC+AT Q A + +E VD+++VVGG SSNT L
Sbjct: 162 LQ---IASYLVEKCTEVRI-FNTICNATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQL 216
Query: 259 QEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 318
IA+ SY ++ E + W K + GIT+GASTPD
Sbjct: 217 LSIAKQHCKDSYLVEDENELEMA-----------------WF-KDKKLCGITAGASTPDW 258
Query: 319 AVEDVLKKVFEI 330
+E+V +K+ I
Sbjct: 259 IIENVKQKISTI 270
>gi|304316815|ref|YP_003851960.1| hydroxymethylbutenyl pyrophosphate reductase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778317|gb|ADL68876.1| hydroxymethylbutenyl pyrophosphate reductase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 286
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 148/331 (44%), Gaps = 69/331 (20%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AY+ + + + E+IHNP V + LE+ ++ I +G D + + D +++
Sbjct: 21 VAYDQINRDDNRRTYTYGELIHNPQVVRDLEDKGIKTI---DG---IDNLKENDRIIIRT 74
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
G + L K ++++D TCP+V +V V + K YT +I G +H E +
Sbjct: 75 HGIPEKTYKDLKEKKIELIDMTCPFVKRVQKIVNGYYKKGYTIVIIGDKNHPEVIG---- 130
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
+NG +E P +D K +
Sbjct: 131 ------------------------VNGWCDNSAYVIESVNDV---QLLPYID--KACVVA 161
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTT+ + E+ L++ VNE +SFNTICDAT +RQ + + + +K D+
Sbjct: 162 QTTITQKMWEDSLNLLKLK---------VNE-LVSFNTICDATNKRQSSA-EEISKKADV 210
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG NSSNT L+ I E + +++ ++I + + +
Sbjct: 211 MIVIGGKNSSNTQKLKRICEKNCKRTIQVEN------ADEIDLSIFNDNDI--------- 255
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREE 334
+GIT+GASTPD +++V+ K+ I R+E
Sbjct: 256 ---VGITAGASTPDYLIQEVINKI-AINRKE 282
>gi|417819540|ref|ZP_12466156.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HE39]
gi|423947642|ref|ZP_17733601.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HE-40]
gi|423976912|ref|ZP_17737149.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HE-46]
gi|340041102|gb|EGR02070.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HE39]
gi|408661639|gb|EKL32623.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HE-40]
gi|408666010|gb|EKL36813.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HE-46]
Length = 316
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 143/318 (44%), Gaps = 67/318 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L++ + + ++ + V ++V+ A G + +
Sbjct: 33 IYVRHEVVHNRFVVEGLKQRGARFV------EELNEVPDDNIVIFSAHGVSQAVRQEAKD 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++ + D TCP V+KV V + + ++ G H E T G+Y
Sbjct: 87 RSLTVFDATCPLVTKVHMEVARASRKHMEVVLIGHAGHPEVEGTM---GQY--------- 134
Query: 137 EYVCDYILGGELNGSSSTKEAFL-EKFKKAVS---KGFDPDVDLVKVGIANQTTMLKGET 192
+S T +L EK + VS K DP + +QTT+ ET
Sbjct: 135 --------------ASDTGGMYLVEKPEDVVSLQAKVKDPS----NLHYVSQTTLSVDET 176
Query: 193 EEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNS 252
++ + + + G + IC ATQ RQDA+ +++ E+VD+++VVG NS
Sbjct: 177 ADVIDELRRVFPKIQGPRK--------DDICYATQNRQDAV-RILAEQVDVMVVVGSKNS 227
Query: 253 SNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSG 312
SN++ L+E+AE G P Y D + I P W Q+ IG+T+G
Sbjct: 228 SNSTRLKELAEKLGTPGYLTDCPQDIHP-----------------EWFVDAQL-IGVTAG 269
Query: 313 ASTPDKAVEDVLKKVFEI 330
AS P++ V +L ++ E+
Sbjct: 270 ASAPEELVNQILDRIKEL 287
>gi|333924185|ref|YP_004497765.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Desulfotomaculum carboxydivorans CO-1-SRB]
gi|333749746|gb|AEF94853.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 667
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 145/328 (44%), Gaps = 75/328 (22%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+A A ++ P I+ +IHNP V + L + ++ I D V+ G V++ +
Sbjct: 19 LAAAAEEKGP---IYTLGPLIHNPRVVQDLAQKGIKEI------NSLDQVDGGTVIIR-S 68
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
G + E +K ++I+D TCP+V + + + I G H E +
Sbjct: 69 HGVSPEVFRQAADKGIKIIDATCPFVGRAQKFAREMAEKGLPVYIVGDPGHPEVQGILGW 128
Query: 124 AG-KYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIA 182
+G K I+++N D I VD KVG+
Sbjct: 129 SGGKGIVIEN-------ADQI----------------------------SQVDHSKVGLV 153
Query: 183 NQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVD 242
QTT + + VE +++ GVE + NTIC AT ERQ A ++ ++ VD
Sbjct: 154 AQTTQPVANYQGV---VE--ALKQQGVE-----VDARNTICLATGERQRAALELAKQ-VD 202
Query: 243 LILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPK 302
+++VVGG S+NT L +I + G P+Y ++S + +E W +
Sbjct: 203 VMVVVGGRESANTKKLAKICRESGTPTYHVESAAEL-----------------QEEWF-R 244
Query: 303 GQITIGITSGASTPDKAVEDVLKKVFEI 330
G T G+T+GASTPD +E+V +++ E+
Sbjct: 245 GVKTAGLTAGASTPDAIIEEVKRRMKEL 272
>gi|32265637|ref|NP_859669.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
hepaticus ATCC 51449]
gi|50400966|sp|Q7VJV5.1|ISPH_HELHP RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|32261685|gb|AAP76735.1| penicillin tolerance protein LytB [Helicobacter hepaticus ATCC
51449]
Length = 273
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 127/296 (42%), Gaps = 71/296 (23%)
Query: 43 VEEGKKQFDV--------VNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWT 94
+E +K FDV K V++ G +++ L + I+D TCP+V+K
Sbjct: 41 IERLQKDFDVSLSRSLEEAQKFKSVIVRTHGITKDDLQVLKEHHTHIIDATCPFVTKPQQ 100
Query: 95 SVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSST 154
VEK + Y II G SH E AS+ I+ N+ E +++
Sbjct: 101 IVEKMSQEGYQIIIFGDNSHPEVKGVASYGDDVAIIANIDELKHL--------------- 145
Query: 155 KEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNE 214
KK KV + +QTT + E GK+ V VNE
Sbjct: 146 ------TLKK-------------KVALVSQTT---KQPEHFGKIA------ALLVSLVNE 177
Query: 215 HFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDS 274
I FNTIC AT E Q A+ ++ E D++++VGG NSSNT L +IA++ SY I+
Sbjct: 178 CRI-FNTICSATFENQFAVDELSRE-ADIMVIVGGKNSSNTKQLFKIAKEYCTDSYLIED 235
Query: 275 EKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 330
E I W G+ GIT+GASTPD + V +K+ +I
Sbjct: 236 ENEID-----------------NTWFV-GKELCGITAGASTPDWIISRVQEKIEQI 273
>gi|242238042|ref|YP_002986223.1| hydroxymethylbutenyl pyrophosphate reductase [Dickeya dadantii
Ech703]
gi|242130099|gb|ACS84401.1| hydroxymethylbutenyl pyrophosphate reductase [Dickeya dadantii
Ech703]
Length = 316
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 138/322 (42%), Gaps = 61/322 (18%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L E I +Q D V G +++ A G + N
Sbjct: 33 IYVRHEVVHNRYVVDGLRERGAIFI------EQIDEVPDGAILIFSAHGVSQAVRAEARN 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++ + D TCP V+KV V + + +I+ G H E T G+Y N K
Sbjct: 87 RDLTVFDATCPLVTKVHMEVARASRKGMEAILIGHAGHPEVEGTM---GQY---SNPKGG 140
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
Y+ + + + + K + F QTT+ +T +
Sbjct: 141 MYLVE-----------GPDDVWSLQVKNETNLCF-----------MTQTTLSVDDTSAVI 178
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+ + G + IC AT RQ+A+ + +E D++LVVG NSSN++
Sbjct: 179 DALRARFPQIIGPRK--------DDICYATTNRQEAVRNLAQE-ADVVLVVGSKNSSNSN 229
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L E+A+ G PSY IDS I +E+W + +G+T+GAS P
Sbjct: 230 RLAELAQRVGKPSYLIDSADDI-----------------QESWFSR-TACVGVTAGASAP 271
Query: 317 DKAVEDVLKKVFEIKREEALQL 338
D V+ V+K++ + + AL++
Sbjct: 272 DVLVQQVVKRLQGMGGQIALEM 293
>gi|187929780|ref|YP_001900267.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ralstonia
pickettii 12J]
gi|187726670|gb|ACD27835.1| hydroxymethylbutenyl pyrophosphate reductase [Ralstonia pickettii
12J]
Length = 327
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 136/311 (43%), Gaps = 64/311 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V L + ++ D V G V+ A G +
Sbjct: 52 IYVRHEIVHNAYVVGDLRNKGAVFV------QELDDVPVGGTVIFSAHGVSRAVREAAEA 105
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V K + + I+ G H E T A +++
Sbjct: 106 RGLRVFDATCPLVTKVHVEVSKMRAQGFEIIMIGHKGHPEVEGTMGQANDGMLL-----V 160
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
E V D L ST+ A++ QTT+ ET+EI
Sbjct: 161 ESVDDV---AHLEVKDSTRLAYV-----------------------TQTTLSVDETQEI- 193
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
V R V H IC ATQ RQDA+ K + +V++++VVG NSSN++
Sbjct: 194 --VAAIKARFPAV-----HEPKKQDICYATQNRQDAV-KFMAPQVEVVIVVGSPNSSNSN 245
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L+E+AE G+P+Y +D+ +++ P W+ G+ +G+T+GAS P
Sbjct: 246 RLRELAEKLGVPAYMVDTPEQVRP-----------------EWV-AGKRRVGLTAGASAP 287
Query: 317 DKAVEDVLKKV 327
++ + ++ ++
Sbjct: 288 EELAQSIVDRL 298
>gi|94265750|ref|ZP_01289486.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [delta
proteobacterium MLMS-1]
gi|93453725|gb|EAT04103.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [delta
proteobacterium MLMS-1]
Length = 337
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 134/295 (45%), Gaps = 71/295 (24%)
Query: 23 IIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIV 82
+IHNP V L + V+ + EE +Q ++G VV+ A G +L +
Sbjct: 99 LIHNPQVLTMLGQKGVEVL--EEVPEQ----SQGTVVIR-AHGVPPARKQSLEESGAVVE 151
Query: 83 DTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKY-IIVKNMKEAEYVCD 141
D TCP V KV ++K+++ YT++I G H E AG+ +++ +M+E +
Sbjct: 152 DATCPRVVKVQAIIDKYRRQGYTTVIVGDRDHAEVEGLVGHAGEVGLVISSMEELD---- 207
Query: 142 YILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEK 201
G EL K ++ + +QTT + EE+ +L+
Sbjct: 208 ---GLEL------KPPYI---------------------VVSQTT----QDEEMFQLITA 233
Query: 202 TMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEI 261
++ +F V FNTICD+T +RQD + +M + VD ++VVGG NS+NT L EI
Sbjct: 234 GVLSRFPGGKV------FNTICDSTHKRQDEVREMCRQ-VDALVVVGGRNSANTKRLAEI 286
Query: 262 AEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
A P + +++E + Y+ ++G+T+GASTP
Sbjct: 287 ARGLACPVFLVETEAELQFEQMRRYQ------------------SVGVTAGASTP 323
>gi|359768917|ref|ZP_09272682.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Gordonia
polyisoprenivorans NBRC 16320]
gi|359313614|dbj|GAB25515.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Gordonia
polyisoprenivorans NBRC 16320]
Length = 335
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 129/314 (41%), Gaps = 75/314 (23%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ EI+HN V L E + + D V +G +VV A G + E T
Sbjct: 55 VYVRKEIVHNRHVVDTLAERGAIFV------GETDEVPEGAIVVFSAHGVSPEVHRTAAQ 108
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+N++ +D TCP V+KV ++ + DY ++ G HEE TA A ++I
Sbjct: 109 RNLKTIDATCPLVTKVHQEAKRFARDDYDILLIGHEGHEEVEGTAGEAPEHI-------- 160
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
+ G + + S + D KV +QTT+ ET E
Sbjct: 161 ----QLVDGPDAVDTVSVR-------------------DESKVIWLSQTTLSVDETMET- 196
Query: 197 KLVEKTMMRKFGVENVNEHFISFNT-----ICDATQERQDAMYKMVEEKVDLILVVGGWN 251
V + E F N IC ATQ RQ A+ M K DL++VVG N
Sbjct: 197 ------------VRRLRERFPELNDPPSDDICYATQNRQVAVKAMAP-KCDLVIVVGSKN 243
Query: 252 SSNTSHLQEIAEDRGI-PSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGIT 310
SSN+ L E+A G SY +D + I P WL G T+GIT
Sbjct: 244 SSNSVRLVEVALQNGASASYLVDYAREIDPA-----------------WL-DGVETVGIT 285
Query: 311 SGASTPDKAVEDVL 324
SGAS P+ V V+
Sbjct: 286 SGASVPEVLVRGVI 299
>gi|312194579|ref|YP_004014640.1| hydroxymethylbutenyl pyrophosphate reductase [Frankia sp. EuI1c]
gi|311225915|gb|ADP78770.1| hydroxymethylbutenyl pyrophosphate reductase [Frankia sp. EuI1c]
Length = 321
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 137/309 (44%), Gaps = 65/309 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +I+HN V K LE A I VEE ++ V G VV A G A +
Sbjct: 34 VYVRKQIVHNAHVVKTLE--AKGAIFVEETEE----VPHGATVVFSAHGVAPTVHEEASE 87
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ ++ +D TCP V+KV + + + DY ++ G HEE V T A I
Sbjct: 88 RKLRTIDATCPLVTKVHSEARRFAREDYDILLIGHEGHEEVVGTTGQAPDRI-------- 139
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
+++ G + + K DP +V +QTT+ ET
Sbjct: 140 -----HLVDGPEDAADV--------------KVRDPK----RVAYLSQTTLSVDETMTTV 176
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+ + G N + IC ATQ RQ A+ K + VDLILVVG NSSN+
Sbjct: 177 DALRERFPHLTGPPNSD--------ICYATQNRQVAV-KEIANAVDLILVVGSPNSSNSV 227
Query: 257 HLQEIAEDRGIP-SYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
L E+A D G P +Y +D+ +++ + WL +G T+G+TSGAS
Sbjct: 228 RLVEVALDAGAPAAYLVDNCEQV-----------------NDAWL-QGVETVGVTSGASV 269
Query: 316 PDKAVEDVL 324
P++ V +++
Sbjct: 270 PEELVTELM 278
>gi|359798507|ref|ZP_09301078.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Achromobacter
arsenitoxydans SY8]
gi|359363329|gb|EHK65055.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Achromobacter
arsenitoxydans SY8]
Length = 325
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 135/316 (42%), Gaps = 68/316 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V + L I + D G +VV A G +
Sbjct: 42 IYVRHEIVHNRYVVEDLRAKGAIFI------DELDDAPAGSIVVFSAHGVSKAVRAEAEA 95
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA--GKYIIVKNMK 134
+ +Q+ D TCP V+KV V + + I+ G H E T A G Y++
Sbjct: 96 RGLQVFDATCPLVTKVHIEVARMRAAGREIIMIGHKGHPEVEGTLGQAQGGMYLV----- 150
Query: 135 EAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEE 194
E V D A LE VS D + QTT+ + +
Sbjct: 151 --ETVEDV--------------ASLE-----VS-------DPANLAYVTQTTL----SVD 178
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
V + + +F ++ E S IC ATQ RQDA+ M E DL+LVVG NSSN
Sbjct: 179 DAAAVSQALKARF--PSIAEPKKS--DICYATQNRQDAVKVMAPE-CDLVLVVGSPNSSN 233
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
++ L+E+AE +G+ S+ ID I P WL G+ IG+T+GAS
Sbjct: 234 SNRLREVAERKGVASHLIDGAHSIDPA-----------------WL-VGRKRIGVTAGAS 275
Query: 315 TPDKAVEDVLKKVFEI 330
P+ V+ V+ +V E+
Sbjct: 276 APEILVQQVIARVKEL 291
>gi|116690519|ref|YP_836142.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
cenocepacia HI2424]
gi|170733860|ref|YP_001765807.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
cenocepacia MC0-3]
gi|206561049|ref|YP_002231814.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
cenocepacia J2315]
gi|421866512|ref|ZP_16298179.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
cenocepacia H111]
gi|444363374|ref|ZP_21163805.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
cenocepacia BC7]
gi|444367097|ref|ZP_21167091.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
cenocepacia K56-2Valvano]
gi|116648608|gb|ABK09249.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
cenocepacia HI2424]
gi|169817102|gb|ACA91685.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia
cenocepacia MC0-3]
gi|198037091|emb|CAR53012.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1 [Burkholderia
cenocepacia J2315]
gi|358073537|emb|CCE49057.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
cenocepacia H111]
gi|443595137|gb|ELT63742.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
cenocepacia BC7]
gi|443603530|gb|ELT71529.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
cenocepacia K56-2Valvano]
Length = 326
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 143/315 (45%), Gaps = 66/315 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V + L++ I VEE + V G+ V+ A G + +
Sbjct: 48 IYVRHEIVHNKYVVEDLKKKGA--IFVEE----LEEVPAGNTVIFSAHGVSKAVRDEADV 101
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ ++I D TCP V+KV V K ++ ++ G H E T + + M
Sbjct: 102 RGLRIYDATCPLVTKVHVEVAKMRQDGVDIVMIGHKGHPEVEGTMGQ-----VERGMHLV 156
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTM-LKGETEEI 195
E V D ++K + A DP+ ++ + QTT+ + E I
Sbjct: 157 ESVED-----------------VQKLELA-----DPE----RIALVTQTTLSVDDAAEII 190
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
G L K + E IC ATQ RQDA+ K + + D+++VVG NSSN+
Sbjct: 191 GAL-------KAKYPKIREP--KKQDICYATQNRQDAV-KFMAPQCDVVIVVGSPNSSNS 240
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
S L+E+AE RG+ +Y +D+ +I P W+ G+ IG+T+GAS
Sbjct: 241 SRLREVAEKRGVAAYMVDAPDQIDPA-----------------WV-AGKRRIGVTAGASA 282
Query: 316 PDKAVEDVLKKVFEI 330
P+ + V+ ++ E+
Sbjct: 283 PEVLAQAVIARLREL 297
>gi|94263345|ref|ZP_01287160.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [delta
proteobacterium MLMS-1]
gi|93456300|gb|EAT06430.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [delta
proteobacterium MLMS-1]
Length = 361
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 134/295 (45%), Gaps = 71/295 (24%)
Query: 23 IIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIV 82
+IHNP V L + V+ + EE +Q ++G VV+ A G +L +
Sbjct: 123 LIHNPQVLTMLGQKGVEVL--EEVPEQ----SQGTVVIR-AHGVPPARKQSLEESGAVVE 175
Query: 83 DTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKY-IIVKNMKEAEYVCD 141
D TCP V KV ++K+++ YT++I G H E AG+ +++ +M+E +
Sbjct: 176 DATCPRVVKVQAIIDKYRRQGYTTVIVGDRDHAEVEGLVGHAGEVGLVISSMEELD---- 231
Query: 142 YILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEK 201
G EL K ++ + +QTT + EE+ +L+
Sbjct: 232 ---GLEL------KPPYI---------------------VVSQTT----QDEEMFQLITA 257
Query: 202 TMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEI 261
++ +F V FNTICD+T +RQD + +M + VD ++VVGG NS+NT L EI
Sbjct: 258 GVLSRFPGGKV------FNTICDSTHKRQDEVREMCRQ-VDALVVVGGRNSANTKRLAEI 310
Query: 262 AEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
A P + +++E + Y+ ++G+T+GASTP
Sbjct: 311 ARGLACPVFLVETEAELQFEQMRRYQ------------------SVGVTAGASTP 347
>gi|323703064|ref|ZP_08114719.1| hydroxymethylbutenyl pyrophosphate reductase [Desulfotomaculum
nigrificans DSM 574]
gi|323531958|gb|EGB21842.1| hydroxymethylbutenyl pyrophosphate reductase [Desulfotomaculum
nigrificans DSM 574]
Length = 667
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 145/328 (44%), Gaps = 75/328 (22%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+A A ++ P I+ +IHNP V + L + ++ I D V+ G V++ +
Sbjct: 19 LAAAAEEKGP---IYTLGPLIHNPRVVQDLAQKGIKEI------NSLDQVDGGTVIIR-S 68
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
G + E +K ++I+D TCP+V + + + I G H E +
Sbjct: 69 HGVSPEVFRQAADKGIKIIDATCPFVGRAQKFAREMAEKGLPVYIVGDPGHPEVQGILGW 128
Query: 124 AG-KYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIA 182
+G K I+++N D I VD KVG+
Sbjct: 129 SGGKGIVIEN-------ADQI----------------------------SQVDHSKVGLV 153
Query: 183 NQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVD 242
QTT + + VE +++ GVE + NTIC AT ERQ A ++ ++ VD
Sbjct: 154 AQTTQPVANYQGV---VE--ALKQQGVE-----VDARNTICLATGERQRAALELAKQ-VD 202
Query: 243 LILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPK 302
+++VVGG S+NT L +I + G P+Y ++S + +E W +
Sbjct: 203 VMVVVGGRESANTKKLAKICRESGTPTYHVESAAEL-----------------QEEWF-R 244
Query: 303 GQITIGITSGASTPDKAVEDVLKKVFEI 330
G T G+T+GASTPD +E+V +++ E+
Sbjct: 245 GVKTAGLTAGASTPDAIIEEVKRRMKEL 272
>gi|121535824|ref|ZP_01667624.1| hydroxymethylbutenyl pyrophosphate reductase [Thermosinus
carboxydivorans Nor1]
gi|121305596|gb|EAX46538.1| hydroxymethylbutenyl pyrophosphate reductase [Thermosinus
carboxydivorans Nor1]
Length = 655
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 146/333 (43%), Gaps = 88/333 (26%)
Query: 5 AYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAV------QNIPVEEGKKQFDVVNKGDV 58
AY Q P ++ IIHNP + +RL E V + IP
Sbjct: 22 AYACIGQGP---VYTLGPIIHNPQLVQRLSEQGVVMANTLEQIPAGR------------- 65
Query: 59 VVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEK-HKKGDYTSIIHGKYSHEET 117
V++ + G E +++++VD TCP V K + + +KG Y +++ G+ +H E
Sbjct: 66 VIIRSHGVGPEVYDQARARSLEVVDATCPHVRKAQQAARQLAEKGYYVAVV-GEPNHPEV 124
Query: 118 VATASFAGKYI-IVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDL 176
+ ++AG+ + +V+ +A+ + + E+
Sbjct: 125 KSIVAWAGERVTVVETPADAQNL-----------------PYHEQL-------------- 153
Query: 177 VKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKM 236
G+ QTT + I ++ KT R+ V TIC AT +RQ A K+
Sbjct: 154 ---GVVAQTTFASDQFNTIVDIL-KTKCREIEVSR---------TICTATDQRQQAAIKL 200
Query: 237 VEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEK 296
KVD+++VVGG NS+NTS L E+ +G P+Y +++ + + K
Sbjct: 201 AR-KVDVMVVVGGKNSANTSRLAELCRLQGCPTYHVETAQEL-----------------K 242
Query: 297 ENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 329
+W G T+GIT+GASTPD +E+V K+ E
Sbjct: 243 IDWF-TGVQTVGITAGASTPDWIIEEVYSKMQE 274
>gi|115352597|ref|YP_774436.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
ambifaria AMMD]
gi|170697686|ref|ZP_02888774.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia
ambifaria IOP40-10]
gi|172061459|ref|YP_001809111.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
ambifaria MC40-6]
gi|115282585|gb|ABI88102.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
ambifaria AMMD]
gi|170137434|gb|EDT05674.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia
ambifaria IOP40-10]
gi|171993976|gb|ACB64895.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia
ambifaria MC40-6]
Length = 326
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 146/316 (46%), Gaps = 68/316 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V + L++ I VEE + V G+ V+ A G + +
Sbjct: 48 IYVRHEIVHNKYVVEDLKKKGA--IFVEE----LEEVPAGNTVIFSAHGVSKAVRDEADV 101
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ ++I D TCP V+KV V K ++ ++ G H E T + + M
Sbjct: 102 RGLRIYDATCPLVTKVHVEVAKMRQDGVDIVMIGHKGHPEVEGTMGQ-----VERGMHLV 156
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTM-LKGETEEI 195
E V D ++K + A DP+ ++ + QTT+ + E I
Sbjct: 157 ESVED-----------------VQKLELA-----DPE----RIALVTQTTLSVDDAAEII 190
Query: 196 GKLVEK-TMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
G L K +R+ ++ IC ATQ RQDA+ K + + D+++VVG NSSN
Sbjct: 191 GALKSKYPKIREPKKQD----------ICYATQNRQDAV-KFMAPQCDVVIVVGSPNSSN 239
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
+S L+E+AE RG+ +Y +D+ +I P W+ G+ IG+T+GAS
Sbjct: 240 SSRLREVAEKRGVAAYMVDAPDQIDPA-----------------WV-AGKRRIGVTAGAS 281
Query: 315 TPDKAVEDVLKKVFEI 330
P+ + V+ ++ E+
Sbjct: 282 APEVLAQAVIARLREL 297
>gi|402565728|ref|YP_006615073.1| IspH protein [Burkholderia cepacia GG4]
gi|402246925|gb|AFQ47379.1| IspH protein [Burkholderia cepacia GG4]
Length = 326
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 143/315 (45%), Gaps = 66/315 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V + L++ I VEE + V G+ V+ A G + +
Sbjct: 48 IYVRHEIVHNKYVVEDLKKKGA--IFVEE----LEEVPAGNTVIFSAHGVSKAVRDEADV 101
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ ++I D TCP V+KV V K ++ ++ G H E T + + M
Sbjct: 102 RGLRIYDATCPLVTKVHVEVAKMRQDGVDIVMIGHKGHPEVEGTMGQ-----VERGMHLV 156
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTM-LKGETEEI 195
E V D ++K + A DP+ ++ + QTT+ + E I
Sbjct: 157 ESVED-----------------VQKLQLA-----DPE----RIALVTQTTLSVDDAAEII 190
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
G L K + E IC ATQ RQDA+ K + + D+++VVG NSSN+
Sbjct: 191 GAL-------KAKYPKIREP--KKQDICYATQNRQDAV-KFMAPQCDVVIVVGSPNSSNS 240
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
S L+E+AE RG+ +Y +D+ +I P W+ G+ IG+T+GAS
Sbjct: 241 SRLREVAEKRGVDAYMVDAPDQIDPA-----------------WV-AGKRRIGVTAGASA 282
Query: 316 PDKAVEDVLKKVFEI 330
P+ + V+ ++ E+
Sbjct: 283 PEVLAQAVIARLREL 297
>gi|359785565|ref|ZP_09288714.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Halomonas sp.
GFAJ-1]
gi|359297120|gb|EHK61359.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Halomonas sp.
GFAJ-1]
Length = 326
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 149/328 (45%), Gaps = 72/328 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L E + VEE + D V +V+ A G +
Sbjct: 42 IYVRHEVVHNRFVVETLRERGA--VFVEELHEVPDDV----IVIFSAHGVSRAVQQEAEQ 95
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V ++ K I+ G H E T G+Y
Sbjct: 96 RGLKVFDATCPLVTKVHLEVLRYAKRGQECILIGHEGHPEVEGT---MGRY--------- 143
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSK-GFDPDVDLVKVGIANQTTMLKGETEEI 195
D GG++ +L + ++ V+K G + D + QTT+ +T ++
Sbjct: 144 ----DTSHGGQI---------YLVEDEQDVAKLGVN---DPSTLAFVTQTTLSMDDTAKV 187
Query: 196 GKLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGGW 250
++ + E F + IC ATQ RQDA+ ++ + DL+LVVG
Sbjct: 188 -------------IDALREKFPEIQGPRKDDICYATQNRQDAVRELAADS-DLVLVVGSP 233
Query: 251 NSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGIT 310
NSSN++ L+E++E G P+Y ID+ +I P WL +G IG+T
Sbjct: 234 NSSNSNRLRELSERMGTPAYLIDNADQIEPA-----------------WL-EGVSRIGVT 275
Query: 311 SGASTPDKAVEDVLKKVFEIKREEALQL 338
+GAS P+ V+ V+ K+ + E ++L
Sbjct: 276 AGASAPEVLVKGVIDKLQTLGAEVPVEL 303
>gi|334129384|ref|ZP_08503189.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Methyloversatilis universalis FAM5]
gi|333445610|gb|EGK73551.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Methyloversatilis universalis FAM5]
Length = 308
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 128/314 (40%), Gaps = 64/314 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L I V G ++ A G
Sbjct: 33 IYVRHEVVHNKFVVDSLRAKGAIFI------DDLADVPAGATLIFSAHGVPQAVRHDAGA 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V K + ++ G H E T
Sbjct: 87 RGLRVFDATCPLVTKVHVEVAKMRDAGREIVMIGHKGHPEVEGTM--------------- 131
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
G+ G E + VS DPD K+ QTT+ + + I
Sbjct: 132 ---------GQSEGGMHLVETVTDVQTLRVS---DPD----KLAYVTQTTLSVDDAQTIV 175
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+ G + + IC ATQ RQDA+ K + + DL+LVVG NSSN++
Sbjct: 176 DALRARFPTIVGPKR--------DDICYATQNRQDAV-KFMAPRSDLVLVVGSPNSSNSN 226
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L+E+AE G+P+Y ID+ +I PG WL G+ +G+T+GAS P
Sbjct: 227 RLREVAEQFGVPAYLIDNASQIDPG-----------------WL-DGRKRVGVTAGASAP 268
Query: 317 DKAVEDVLKKVFEI 330
+ V+ V+ ++ E+
Sbjct: 269 EVLVDAVIARLREL 282
>gi|224824627|ref|ZP_03697734.1| hydroxymethylbutenyl pyrophosphate reductase [Pseudogulbenkiania
ferrooxidans 2002]
gi|347538645|ref|YP_004846069.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Pseudogulbenkiania sp. NH8B]
gi|224603120|gb|EEG09296.1| hydroxymethylbutenyl pyrophosphate reductase [Pseudogulbenkiania
ferrooxidans 2002]
gi|345641822|dbj|BAK75655.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Pseudogulbenkiania sp. NH8B]
Length = 311
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 142/322 (44%), Gaps = 64/322 (19%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L + I + V +G +V A G +
Sbjct: 35 IYVRHEVVHNRFVVDNLRDKGAIFI------EDLADVPRGATLVYSAHGVPLSVRQEAEE 88
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ + + D TCP V+KV V++ + I+ G H E T
Sbjct: 89 RGLTVYDATCPLVTKVHVEVKRMHQAGMEIIMIGHAGHPEVEGTM--------------- 133
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
G+++G E+ + AV +PD K+ +QTT+ ET +I
Sbjct: 134 ---------GQVDGDMYLVESVADVATLAVK---NPD----KLAYVSQTTLSVDETRDI- 176
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+ +R + N + + IC ATQ RQDA+ K++ E+ DL++VVG NSSN++
Sbjct: 177 --IAALRVRFPAIANPKK-----DDICYATQNRQDAV-KVLAEQCDLVIVVGSPNSSNSN 228
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L+E+A +G+ +Y +D+ + P W +G+ +G+T+GAS P
Sbjct: 229 RLREVAALKGVEAYMVDNATLLEP-----------------QWF-EGKSRVGVTAGASAP 270
Query: 317 DKAVEDVLKKVFEIKREEALQL 338
+ V+ V+ ++ E+ + +L
Sbjct: 271 EVLVQAVITRIRELGADSVTEL 292
>gi|383807686|ref|ZP_09963246.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Candidatus
Aquiluna sp. IMCC13023]
gi|383299040|gb|EIC91655.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Candidatus
Aquiluna sp. IMCC13023]
Length = 338
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 148/324 (45%), Gaps = 65/324 (20%)
Query: 2 AFIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVL 61
A IA E +++ +I+HN V + LE I VEE D +G V++
Sbjct: 34 AVIAVEKALDHYGAPVYVRKQIVHNKHVVRSLERRGA--IFVEE----VDEAPEGCVMIF 87
Query: 62 PAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATA 121
A G + + ++N Q +D TCP V+KV V++ +K Y ++ G HEE TA
Sbjct: 88 SAHGVSPAVVAMAESRNQQTIDATCPLVTKVHREVQRFEKEGYDILLVGHEGHEEVEGTA 147
Query: 122 SFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGI 181
A + + ++G+ +A ++ DP KV
Sbjct: 148 GQAPGIVQL-----------------IDGNDDIAKAKVK----------DPS----KVIW 176
Query: 182 ANQTTMLKGET-EEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEK 240
+QTT+ ET E + K+ EK + +EN + IC ATQ RQ A+ K+ +
Sbjct: 177 LSQTTLSVDETMETVLKIREKYPL----LENPPS-----DDICYATQNRQVAIKKIGADS 227
Query: 241 VDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWL 300
DL++VVG NSSNT L E+A + G K AY++ +E E+W
Sbjct: 228 -DLVIVVGSANSSNTVRLVEVA---------------LEAGAKAAYRVDFASEIE-ESWF 270
Query: 301 PKGQITIGITSGASTPDKAVEDVL 324
+G T+G++SGAS P++ V DVL
Sbjct: 271 -EGVATVGVSSGASVPEELVSDVL 293
>gi|390571890|ref|ZP_10252121.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
terrae BS001]
gi|389936124|gb|EIM98021.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
terrae BS001]
Length = 319
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 139/314 (44%), Gaps = 64/314 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V + L + I +Q D V G V+ A G + +
Sbjct: 43 IYVRHEIVHNAYVVEDLRKKGAIFI------EQLDEVPSGSTVIFSAHGVSKAVRAEADE 96
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V K + + ++ G H E T + E
Sbjct: 97 RGLRVYDATCPLVTKVHIEVAKMRAEGFDIVMIGHKGHPEVEGT---------MGQTAEG 147
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
Y+ + +++ + + A DP+ ++ QTT+ + +I
Sbjct: 148 MYLVE-----DIDDVQALQLA-------------DPE----RIAYVTQTTLSVDDAAQI- 184
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+ KF +V E IC ATQ RQDA+ K + + D+++VVG NSSN++
Sbjct: 185 ---IAALKAKF--PSVKEP--KKQDICYATQNRQDAV-KFMAPQCDVVIVVGSPNSSNSN 236
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L+E+AE G+PSY +DS +I P W+ + IG+T+GAS P
Sbjct: 237 RLRELAEKLGVPSYMVDSPDQIDPA-----------------WVADKR-RIGVTAGASAP 278
Query: 317 DKAVEDVLKKVFEI 330
+ + V+ ++ E+
Sbjct: 279 EALAQAVIGRLREL 292
>gi|288941321|ref|YP_003443561.1| hydroxymethylbutenyl pyrophosphate reductase [Allochromatium
vinosum DSM 180]
gi|288896693|gb|ADC62529.1| hydroxymethylbutenyl pyrophosphate reductase [Allochromatium
vinosum DSM 180]
Length = 321
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 137/311 (44%), Gaps = 59/311 (18%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L E I +EE D V +V A G
Sbjct: 40 IYVRHEVVHNRFVVDGLRERGA--IFIEE----LDDVPDNATLVFSAHGVPQSVRQAAEA 93
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V ++ K + ++ G H E T G+++ +
Sbjct: 94 RGLRVFDATCPLVTKVHLEVARYCKNGVSVVLIGHRGHPEVEGTL---GQFVEAADGAAM 150
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
V K A +E A DP+ ++ QTT+ ++ EI
Sbjct: 151 HLV--------------EKAADVESLVVA-----DPE----RLAYVTQTTLSMDDSREI- 186
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+ R ++ + + IC ATQ RQDA+ + + + DL+LVVG NSSN++
Sbjct: 187 --IAALQARFPAIQGPKK-----SDICYATQNRQDAIRDLAQ-RCDLMLVVGSPNSSNSN 238
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L+E+AE +G +Y ID + I + +WL G+ IG+T+GAS P
Sbjct: 239 RLRELAEKQGCAAYLIDGPEDI-----------------QRDWL-NGRARIGVTAGASAP 280
Query: 317 DKAVEDVLKKV 327
+ VE V+ ++
Sbjct: 281 EILVERVIGQL 291
>gi|386810679|ref|ZP_10097906.1| putative hydroxymethylbutenyl pyrophosphate reductase
[planctomycete KSU-1]
gi|386406234|dbj|GAB60787.1| putative hydroxymethylbutenyl pyrophosphate reductase
[planctomycete KSU-1]
Length = 568
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 149/326 (45%), Gaps = 81/326 (24%)
Query: 16 KIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLN 75
K++ +IHNP V + LE+ +Q + Q D+ V++ A G +
Sbjct: 22 KVYTDGPLIHNPQVLEYLEKRGIQIV-----NGQTDLSK--STVIIRAHGITPGRRKEIE 74
Query: 76 NKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA-GKYIIVKNMK 134
++ D TCP V +V + ++K+ Y+++I G H E + +A GK +++ ++
Sbjct: 75 QTGAKVCDATCPHVMRVQSIIKKYAAQGYSTVIVGDKGHAEVIGLLGYAEGKGYVIQELE 134
Query: 135 EAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTT----MLKG 190
E EY+ P +D KV I QTT M K
Sbjct: 135 EIEYL--------------------------------PPMD--KVCIVAQTTQDRRMFK- 159
Query: 191 ETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGW 250
E I +L ++ H SF TIC +T +RQD + + + VD ++VVGG
Sbjct: 160 --EAIDRLKKR-----------YSHCESFETICSSTYKRQDEVINLTKS-VDAMIVVGGR 205
Query: 251 NSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGIT 310
S+NT+ L +I E +G P+ ++++ + +L + +++ T+G+T
Sbjct: 206 GSANTTRLVKICESQGTPTIHVETDAEL-------------DLDKLKDY-----DTVGVT 247
Query: 311 SGASTPDKAVEDVLKKV--FEIKREE 334
+GASTP+ ++ V++KV +++ R E
Sbjct: 248 AGASTPNWMIKRVVEKVHSYKVNRYE 273
>gi|188588993|ref|YP_001921151.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
botulinum E3 str. Alaska E43]
gi|188499274|gb|ACD52410.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
botulinum E3 str. Alaska E43]
Length = 635
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 152/343 (44%), Gaps = 83/343 (24%)
Query: 5 AYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAF 64
A + +KQ E+KI+ +IHN V K LE+ + +I +E +NK DV+V+ +
Sbjct: 23 AIKIQKQ-EEKKIYTLGPLIHNNDVVKFLEKNNIYSIELE----NIATLNKDDVIVIRSH 77
Query: 65 GAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA 124
G + E + L ++I D TCP+V+K+ V K+ Y +I G +H E + +
Sbjct: 78 GVSEEVLNLLQQNQLKIKDATCPFVTKIQKKVNKYYNLGYNIVILGDANHPEVIGINGWC 137
Query: 125 -GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
+ II KN GEL+G KV + +
Sbjct: 138 NNEAIISKN-------------GELHGDVPA-----------------------KVCVVS 161
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTT E T+++ + ++ ++FNTIC AT RQ + K+ +E V+
Sbjct: 162 QTTEKAANWE--------TLIKNVSAK--SKEVLAFNTICAATDVRQRSTNKLSKE-VEA 210
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG NSSNT+ L +IA+ +H +E N LPK
Sbjct: 211 MVVIGGKNSSNTTKLYQIAKQN-------------------CDDTIH---IENVNELPKE 248
Query: 304 QIT-----IGITSGASTPD---KAVEDVLKKVFEIKREEALQL 338
I +GIT+GASTPD + V ++ IK ++ L L
Sbjct: 249 FINNNINKVGITAGASTPDWIIREVIGIMSNTENIKNDDQLSL 291
>gi|167567357|ref|ZP_02360273.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
oklahomensis EO147]
gi|167574502|ref|ZP_02367376.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
oklahomensis C6786]
Length = 313
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 135/312 (43%), Gaps = 66/312 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V + L + + ++ D V G V + A G A +
Sbjct: 33 VYVRHEIVHNRHVVENLRNKGARFV------EELDEVPHGAVAIFSAHGVAQTVEMDAEA 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKE 135
+ + ++D TCP V+KV ++ I+ G H E T G+ I+V++ E
Sbjct: 87 RGLDVLDATCPLVTKVHVQGRQYVAAGRRLILIGHAGHPEVEGTIGQIPGEVILVQSEAE 146
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
+ L + T A++ QTT+ +T I
Sbjct: 147 VDT---------LTLPADTPIAYV-----------------------TQTTLSVDDTRGI 174
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
+ +++ G + IC ATQ RQ A+ ++ E+VD++LVVG NSSN+
Sbjct: 175 IEALQRRFTDIVGPDT--------RDICYATQNRQAAVREL-SEQVDVLLVVGATNSSNS 225
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L+EI + G+PSY + G++I + W G +G+T+GAS
Sbjct: 226 NRLREIGTESGVPSYLVAD------GSEI-----------RAEWF-AGACAVGLTAGASA 267
Query: 316 PDKAVEDVLKKV 327
P++ VEDV+ +
Sbjct: 268 PEEMVEDVIAAL 279
>gi|171316761|ref|ZP_02905973.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia
ambifaria MEX-5]
gi|171098111|gb|EDT42926.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia
ambifaria MEX-5]
Length = 326
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 146/316 (46%), Gaps = 68/316 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V + L++ I VEE + V G+ V+ A G + +
Sbjct: 48 IYVRHEIVHNKYVVEDLKKKGA--IFVEE----LEEVPAGNTVIFSAHGVSKAVRDEADV 101
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ ++I D TCP V+KV V K ++ ++ G H E T + + M
Sbjct: 102 RGLRIYDATCPLVTKVHVEVAKMRQDGVDIVMIGHKGHPEVEGTMGQ-----VERGMHLV 156
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTM-LKGETEEI 195
E V D ++K + A DP+ ++ + QTT+ + E I
Sbjct: 157 ESVED-----------------VQKLELA-----DPE----RIALVTQTTLSVDDAAEII 190
Query: 196 GKLVEK-TMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
G L K +R+ ++ IC ATQ RQDA+ K + + D+++VVG NSSN
Sbjct: 191 GALKSKYPKIREPKKQD----------ICYATQNRQDAV-KFMAPQCDVVIVVGSPNSSN 239
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
+S L+E+AE RG+ +Y +D+ +I P W+ G+ IG+T+GAS
Sbjct: 240 SSRLREVAEKRGVAAYMVDAPDQIDPA-----------------WV-AGKRRIGVTAGAS 281
Query: 315 TPDKAVEDVLKKVFEI 330
P+ + V+ ++ E+
Sbjct: 282 APEVLAQAVIARLREL 297
>gi|344172144|emb|CCA84772.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ralstonia
syzygii R24]
Length = 324
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 135/311 (43%), Gaps = 64/311 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V L + ++ D V G V+ A G +
Sbjct: 49 IYVRHEIVHNAYVVSDLRSKGAVFV------QELDDVPVGGTVIFSAHGVSRAVREAAEA 102
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V K + + I+ G H E T A +++ ++
Sbjct: 103 RGLRVFDATCPLVTKVHVEVSKMRAQGFEIIMIGHKGHPEVEGTMGQADDGMLL--VESV 160
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
+ V ++ D ++ QTT+ ET+EI
Sbjct: 161 DDVARLVVN-----------------------------DPARLAYVTQTTLSVDETQEI- 190
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
V R V H IC ATQ RQDA+ K + +V++++VVG NSSN++
Sbjct: 191 --VAAIKARFPAV-----HEPKKQDICYATQNRQDAV-KFMAPQVEVVIVVGSPNSSNSN 242
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L+E+AE G+P+Y +D+ +++ P WL G+ +G+T+GAS P
Sbjct: 243 RLRELAEKLGVPAYMVDTPEQVRP-----------------EWL-AGKRRVGLTAGASAP 284
Query: 317 DKAVEDVLKKV 327
++ + ++ ++
Sbjct: 285 EELAQSIVDRL 295
>gi|209517440|ref|ZP_03266281.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia sp.
H160]
gi|209502094|gb|EEA02109.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia sp.
H160]
Length = 319
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 145/316 (45%), Gaps = 68/316 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V + L + I + D V G+ V+ A G + +
Sbjct: 43 IYVRHEIVHNAYVVEDLRKKGAIFI------ENLDEVPAGNTVIFSAHGVSKAVRSEAES 96
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYI-IVKNMKE 135
+ +++ D TCP V+KV V K ++ + ++ G H E T A + + +V+++++
Sbjct: 97 RGLRVYDATCPLVTKVHIEVAKMRQDGFDIVMIGHKGHPEVEGTMGQAAEGMHLVEDIED 156
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTM-LKGETEE 194
+ + LE DP+ ++ QTT+ + E
Sbjct: 157 VQAL------------------QLE----------DPE----RIAFVTQTTLSVDDAAEI 184
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
IG L K ++ E IC ATQ RQDA+ K + + D+++VVG NSSN
Sbjct: 185 IGAL-------KAKYPSIREP--KKQDICYATQNRQDAV-KFMAPQCDVVVVVGSPNSSN 234
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
++ L+E+AE G+P+Y +DS +I P W+ +G+ IG+T+GAS
Sbjct: 235 SNRLRELAEKLGVPAYMVDSPDQIDP-----------------VWV-EGKRRIGVTAGAS 276
Query: 315 TPDKAVEDVLKKVFEI 330
P+ + V+ ++ E+
Sbjct: 277 APEVLAQAVIARLREL 292
>gi|73542415|ref|YP_296935.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ralstonia
eutropha JMP134]
gi|72119828|gb|AAZ62091.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ralstonia
eutropha JMP134]
Length = 324
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 138/316 (43%), Gaps = 68/316 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V L + ++ D V G V+ A G + + +
Sbjct: 42 IYVRHEIVHNAYVVADLRRKGAVFV------RELDEVPAGATVIFSAHGVSKDVRAEAAS 95
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ + + D TCP V+KV V K + ++ G H E T M +A
Sbjct: 96 RGLNVFDATCPLVTKVHVEVGKMRAEGCEIVMIGHRGHPEVEGT------------MGQA 143
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
E GG L S A L D ++ QTT+ ET EI
Sbjct: 144 E-------GGMLLVESVADVAGLVV------------ADPARLAYVTQTTLSVDETLEIV 184
Query: 197 KLVEK--TMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
++ ++R+ ++ IC ATQ RQDA+ K + +VD+++VVG NSSN
Sbjct: 185 AALKARFPLIREPKKQD----------ICYATQNRQDAV-KFMAPQVDVVIVVGSPNSSN 233
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
++ L+E+A G+P+Y +D+ ++ P W+ G+ IG+T+GAS
Sbjct: 234 SNRLRELAARLGVPAYMVDAPDQVHP-----------------EWV-AGKRRIGLTAGAS 275
Query: 315 TPDKAVEDVLKKVFEI 330
P++ + ++ ++ E+
Sbjct: 276 APEELAQSIVARLREL 291
>gi|300690693|ref|YP_003751688.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ralstonia
solanacearum PSI07]
gi|299077753|emb|CBJ50391.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ralstonia
solanacearum PSI07]
Length = 324
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 135/311 (43%), Gaps = 64/311 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V L + ++ D V G V+ A G +
Sbjct: 49 IYVRHEIVHNAYVVSDLRSKGAVFV------QELDDVPVGGTVIFSAHGVSRAVREAAEA 102
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V K + + I+ G H E T A +++ ++
Sbjct: 103 RGLRVFDATCPLVTKVHVEVSKMRAQGFEIIMIGHKGHPEVEGTMGQADDGMLL--VESV 160
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
+ V ++ D ++ QTT+ ET+EI
Sbjct: 161 DDVARLVVN-----------------------------DPARLAYVTQTTLSVDETQEI- 190
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
V R V H IC ATQ RQDA+ K + +V++++VVG NSSN++
Sbjct: 191 --VAAIKARFPAV-----HEPKKQDICYATQNRQDAV-KFMAPQVEVVIVVGSPNSSNSN 242
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L+E+AE G+P+Y +D+ +++ P WL G+ +G+T+GAS P
Sbjct: 243 RLRELAEKLGVPAYMVDTPEQVRP-----------------EWL-AGKRRVGLTAGASAP 284
Query: 317 DKAVEDVLKKV 327
++ + ++ ++
Sbjct: 285 EELAQSIVDRL 295
>gi|256379028|ref|YP_003102688.1| hydroxymethylbutenyl pyrophosphate reductase [Actinosynnema mirum
DSM 43827]
gi|255923331|gb|ACU38842.1| hydroxymethylbutenyl pyrophosphate reductase [Actinosynnema mirum
DSM 43827]
Length = 307
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 125/308 (40%), Gaps = 64/308 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+ + +I+HN V RLE M + + D V G VVV A G +
Sbjct: 36 VHVRKQIVHNTHVVARLESMGAVFV------DELDEVPDGAVVVFSAHGVSPAVRAEAER 89
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ ++VD TCP V+KV + T ++ G HEE T A +++ + EA
Sbjct: 90 RGFEVVDATCPLVTKVHAEARRFAGRGDTVVLIGHAGHEEVEGTLGEAPDRMLLVDGPEA 149
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
+ DP+ +V QTT+ E E+
Sbjct: 150 VAALEV---------------------------EDPE----RVSYLMQTTLAADEATEVV 178
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+ K G S + IC AT RQ+A+ ++ E DL+LVVG NSSN++
Sbjct: 179 AALRKRFPALRG--------PSSDDICYATTNRQEAVREVAREA-DLVLVVGSANSSNSA 229
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L E+ G+P++ ID + + P WL +G +G+++GAS P
Sbjct: 230 RLVELVRREGVPAHLIDDVRDLRP-----------------RWL-EGVRVVGLSAGASAP 271
Query: 317 DKAVEDVL 324
V++V+
Sbjct: 272 PGLVDEVV 279
>gi|254247437|ref|ZP_04940758.1| LytB protein [Burkholderia cenocepacia PC184]
gi|124872213|gb|EAY63929.1| LytB protein [Burkholderia cenocepacia PC184]
Length = 540
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 143/315 (45%), Gaps = 66/315 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V + L++ I VEE + V G+ V+ A G + +
Sbjct: 262 IYVRHEIVHNKYVVEDLKKKGA--IFVEE----LEEVPAGNTVIFSAHGVSKAVRDEADV 315
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ ++I D TCP V+KV V K ++ ++ G H E T + + M
Sbjct: 316 RGLRIYDATCPLVTKVHVEVAKMRQDGVDIVMIGHKGHPEVEGTMGQ-----VERGMHLV 370
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI- 195
E V D ++K + A DP+ ++ + QTT+ + EI
Sbjct: 371 ESVED-----------------VQKLELA-----DPE----RIALVTQTTLSVDDAAEII 404
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
G L K + E IC ATQ RQDA+ K + + D+++VVG NSSN+
Sbjct: 405 GALKAK-------YPKIRE--PKKQDICYATQNRQDAV-KFMAPQCDVVIVVGSPNSSNS 454
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
S L+E+AE RG+ +Y +D+ +I P W+ G+ IG+T+GAS
Sbjct: 455 SRLREVAEKRGVAAYMVDAPDQIDPA-----------------WV-AGKRRIGVTAGASA 496
Query: 316 PDKAVEDVLKKVFEI 330
P+ + V+ ++ E+
Sbjct: 497 PEVLAQAVIARLREL 511
>gi|330831170|ref|YP_004394122.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Aeromonas
veronii B565]
gi|328806306|gb|AEB51505.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Aeromonas
veronii B565]
Length = 311
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 149/321 (46%), Gaps = 75/321 (23%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAA--VEEMVTL 74
I++ +E++HN V +L+E + VEE D V +V+ A G A V EM
Sbjct: 33 IYVRHEVVHNRYVVNKLKEAGA--VFVEE----LDEVPDDSIVIFSAHGVAKTVREMA-- 84
Query: 75 NNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMK 134
++ +++ D TCP V+KV V + + +++ G H E + T G+Y +N +
Sbjct: 85 KSRALKVFDATCPLVTKVHMEVHRASRKGSEAVLIGHAGHPEVIGTM---GQY---ENRE 138
Query: 135 EAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEE 194
Y+ + + ++ K K +PD DL V QTT+ ET +
Sbjct: 139 GGMYLVE-----------TPEDVAKLKVK-------NPD-DLCFV---TQTTLSVDETSD 176
Query: 195 IGKLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGG 249
+ ++ + +HF + IC ATQ RQDA+ +M VD +LVVG
Sbjct: 177 V-------------IDALRKHFPKIQGPRKDDICYATQNRQDAVREMAG-LVDAMLVVGS 222
Query: 250 WNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGI 309
NSSN++ L+E+AE G +Y ID I + +WL + IG+
Sbjct: 223 RNSSNSNRLRELAEKVGARAYLIDDASMI-----------------EASWLEDVK-AIGV 264
Query: 310 TSGASTPDKAVEDVLKKVFEI 330
T+GAS P+ V++V+ ++ E+
Sbjct: 265 TAGASAPEVLVQNVIARLREL 285
>gi|381151613|ref|ZP_09863482.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Methylomicrobium album BG8]
gi|380883585|gb|EIC29462.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Methylomicrobium album BG8]
Length = 316
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 141/313 (45%), Gaps = 63/313 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN TV L+ A + +E+ K+ V G ++ A G + +
Sbjct: 33 IYVRHEVVHNRTVVDGLK--AKGAVFIEDLKE----VPVGSYLIFSAHGVSKQVQKEAEE 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ + + D TCP V+KV V KH K D I+ G H E T
Sbjct: 87 RQLTVFDATCPLVTKVHIQVAKHAKSDREVILIGHAGHPEVEGTM--------------- 131
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVS--KGFDPDVDLVKVGIANQTTMLKGETEE 194
G+ + +L + + V+ K +PD + QTT+ +T+
Sbjct: 132 ---------GQYEKCTENGGIYLVETPEDVANLKVNNPD----NLTYVTQTTLSMTDTK- 177
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
+V+ R G++ + + IC ATQ RQDA+ + + K D ILVVG NSSN
Sbjct: 178 --VMVDALKARFTGIKEQKK-----DDICYATQNRQDAVQDLAK-KADAILVVGSPNSSN 229
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
++ L+EIAE G P+Y ID+ K + K+ W G +G+T+GAS
Sbjct: 230 SNRLREIAEQLGKPAYLIDTAKDM-----------------KQEWF-DGIEVVGVTAGAS 271
Query: 315 TPDKAVEDVLKKV 327
P+ V++V+ K+
Sbjct: 272 APEVLVQEVISKL 284
>gi|420152334|ref|ZP_14659387.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Actinomyces
massiliensis F0489]
gi|394764941|gb|EJF46575.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Actinomyces
massiliensis F0489]
Length = 345
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 139/319 (43%), Gaps = 73/319 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ EI+HN V + L + + D V +G VV A G + +
Sbjct: 47 IYVRKEIVHNKYVVEALSRRGAIFV------SETDEVPEGARVVFSAHGVSPAVHAQAAS 100
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +Q +D TCP V+KV + KGDY I+ G HEE T A +I V
Sbjct: 101 RQLQTIDATCPLVTKVHKQAIRFAKGDYDIILVGHSGHEEVEGTQGEAPDHIQV------ 154
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
+NG + DP+ KV +QTT+ ET E
Sbjct: 155 -----------VNGPHEVDAVTVR----------DPE----KVVWISQTTLSVDETLETV 189
Query: 197 KLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGGWN 251
+L+ E F + IC ATQ RQ A+ K + +VD+++VVG N
Sbjct: 190 RLL-------------RERFPHLSDPPGDDICYATQNRQGAV-KTIAPQVDVMVVVGSGN 235
Query: 252 SSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITS 311
SSN+ L+E+A + G P+ A+++ + +E E+W G T+G+TS
Sbjct: 236 SSNSVRLKEVALEAGAPA---------------AHRVDYARELE-ESWF-VGARTVGLTS 278
Query: 312 GASTPDKAVEDVLKKVFEI 330
GAS P+ V +V++++ E+
Sbjct: 279 GASVPEILVREVIERLGEM 297
>gi|261416329|ref|YP_003250012.1| hydroxymethylbutenyl pyrophosphate reductase [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|385791193|ref|YP_005822316.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|261372785|gb|ACX75530.1| hydroxymethylbutenyl pyrophosphate reductase [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|302325360|gb|ADL24561.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Fibrobacter
succinogenes subsp. succinogenes S85]
Length = 310
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 134/310 (43%), Gaps = 67/310 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V L++ V + + D V +G VV+ A G A
Sbjct: 34 IYVRHEIVHNKFVVDTLKDKGVVFV------DELDQVPEGSVVIFSAHGVAEHIYEEAKA 87
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA--GKYIIVKNMK 134
+N+Q++D +CP V KV S ++H I+ G H E T G +++N
Sbjct: 88 RNLQVLDASCPLVLKVHFSAKRHYNAGRHIILIGHAGHAEVEGTLGQLPEGAITLIRNEN 147
Query: 135 EAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEE 194
+AE V D EL A++ QTT+ ET +
Sbjct: 148 DAETV-DVPADKEL--------AYI-----------------------TQTTLSVAETRK 175
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
I + +++ G E +C AT RQ A+ ++ E VD++LVVG NSSN
Sbjct: 176 IIEALKRRFPNIIGPEA--------GDLCYATGNRQAAVLELCSE-VDMLLVVGAKNSSN 226
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
+S L E+ ++G+PS+ I + P W +G T+GI+SGAS
Sbjct: 227 SSRLMELGLEQGLPSHLIADVNDLDPA-----------------WF-EGIDTVGISSGAS 268
Query: 315 TPDKAVEDVL 324
P+ V+ V+
Sbjct: 269 APEVLVQGVV 278
>gi|332799296|ref|YP_004460795.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Tepidanaerobacter acetatoxydans Re1]
gi|438002432|ref|YP_007272175.1| SSU ribosomal protein S1p [Tepidanaerobacter acetatoxydans Re1]
gi|332697031|gb|AEE91488.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Tepidanaerobacter acetatoxydans Re1]
gi|432179226|emb|CCP26199.1| SSU ribosomal protein S1p [Tepidanaerobacter acetatoxydans Re1]
Length = 668
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 141/320 (44%), Gaps = 72/320 (22%)
Query: 15 EKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTL 74
EK + +IHNP V +RL+ + + + + +G+V++ G + L
Sbjct: 30 EKAFTLGPLIHNPQVVERLKCSGIIAADLSD-------IKEGNVII-RTHGVEPDLTKQL 81
Query: 75 NNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA-GKYIIVKNM 133
++ V I+D TCP V +V + Y ++I G ++H E + G +++N
Sbjct: 82 ESRPVNIIDCTCPHVKRVHNLAQDISNRGYLTVIIGDHNHPEVEGIKGYCNGDVKVIENA 141
Query: 134 KEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETE 193
+EA K + K KVGI QTT K E
Sbjct: 142 EEA------------------KNFYTTK----------------KVGIIVQTTQTKENIE 167
Query: 194 EIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSS 253
EI + + K +E N NT C ATQ+RQ+A + VD++LV+GG NSS
Sbjct: 168 EIMSV----LRSKLDIEIFN------NTRCKATQQRQEAAADLAR-NVDIMLVIGGKNSS 216
Query: 254 NTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGA 313
NT L ++ ++ G Y I++ + + K++W K +GIT+GA
Sbjct: 217 NTKKLAQVCQNVGASVYHIETAEEL-----------------KKSWF-KYSDKVGITAGA 258
Query: 314 STPDKAVEDVLKKVFEIKRE 333
STPD +++V+ K+ E +E
Sbjct: 259 STPDWIIKEVISKMDEFNKE 278
>gi|424790685|ref|ZP_18217198.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Xanthomonas
translucens pv. graminis ART-Xtg29]
gi|422797877|gb|EKU26067.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Xanthomonas
translucens pv. graminis ART-Xtg29]
Length = 316
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 135/324 (41%), Gaps = 61/324 (18%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L++ I VEE D V G+ V+ A G +
Sbjct: 33 IYVRHEVVHNRFVVDDLKQRGA--IFVEE----LDEVPDGNTVIFSAHGVSQAVRQEAER 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V +H + ++ G H E T
Sbjct: 87 RGLKVFDATCPLVTKVHFEVARHCRAGRDVVLIGHAGHPEVEGTM--------------- 131
Query: 137 EYVCDYILGGELNGSSSTKEAFL-EKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
G+ N T +L E ++ + +L QTT+ +T I
Sbjct: 132 ---------GQWNRERCTGRIYLVEDIEQVATLDIQQPENL---AYTTQTTLSVDDTRGI 179
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
+ G +N + IC ATQ RQDA+ + + DL+LVVG NSSN+
Sbjct: 180 IDALRARYPAMQGPKN--------DDICYATQNRQDAVRDLARQ-CDLVLVVGSPNSSNS 230
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L E+A G+ SY ID + I P W+ G+ IG+T+GAS
Sbjct: 231 NRLSELARRDGVESYLIDGAEEIDPA-----------------WI-AGKRRIGLTAGASA 272
Query: 316 PDKAVEDVLKKVFEIKREEALQLA 339
P V+ V+ ++ E+ + +LA
Sbjct: 273 PQVLVDGVIARLRELGADGVGELA 296
>gi|386751401|ref|YP_006224621.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Shi417]
gi|384557659|gb|AFH98127.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori Shi417]
Length = 274
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 138/312 (44%), Gaps = 67/312 (21%)
Query: 19 ITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKN 78
I +IHN RLE+ N+ +EE K+ + K V++ G +++ L NK
Sbjct: 30 IFGSLIHNAKEINRLEKNF--NVKIEEDPKK---IPKNKSVIIRTHGIPKQDLEYLKNKG 84
Query: 79 VQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEY 138
V+I D TCP+V K VE K Y ++ G +H E S+A +V
Sbjct: 85 VKITDATCPYVIKPQQIVESMSKEGYQIVLFGDINHPEVKGVISYATNQALV-------- 136
Query: 139 VCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKL 198
+N +E L++ KV + +QTT ++ KL
Sbjct: 137 ---------INSLEELQEKKLQR----------------KVVLVSQTT------KQTPKL 165
Query: 199 VEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHL 258
++ + + VE E I FNTIC+AT Q A + +E VD+++VVGG SSNT L
Sbjct: 166 LQ---IASYLVERCTEVRI-FNTICNATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQL 220
Query: 259 QEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 318
IA+ SY ++ E + EL W K + GIT+GASTPD
Sbjct: 221 LSIAKQHCEDSYLVEDENEL-------------ELA----WF-KDKKLCGITAGASTPDW 262
Query: 319 AVEDVLKKVFEI 330
+E+V +K+ I
Sbjct: 263 IIENVKQKISTI 274
>gi|338997877|ref|ZP_08636561.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Halomonas sp.
TD01]
gi|338765240|gb|EGP20188.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Halomonas sp.
TD01]
Length = 329
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 144/317 (45%), Gaps = 72/317 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L E + VEE + D V +V+ A G +
Sbjct: 45 IYVRHEVVHNRFVVETLRERGA--VFVEELHEVPDDV----IVIFSAHGVSRAVQQEAEQ 98
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V ++ K I+ G H E T G+Y
Sbjct: 99 RGLKVFDATCPLVTKVHLEVLRYAKRGQECILIGHEGHPEVEGT---MGRY--------- 146
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSK-GFDPDVDLVKVGIANQTTMLKGETEEI 195
D GG++ +L + ++ V+K G + D + QTT+ +T ++
Sbjct: 147 ----DTSHGGQI---------YLVEDEQDVAKLGVN---DPSALAFVTQTTLSMDDTAKV 190
Query: 196 GKLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGGW 250
++ + E F + IC ATQ RQDA+ ++ + DL+LVVG
Sbjct: 191 -------------IDALREKFPEIQGPRKDDICYATQNRQDAVRELAADS-DLVLVVGSP 236
Query: 251 NSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGIT 310
NSSN++ L+E++E G P+Y ID+ +I P WL +G IG+T
Sbjct: 237 NSSNSNRLRELSERMGTPAYLIDNADQIEPA-----------------WL-EGVSRIGVT 278
Query: 311 SGASTPDKAVEDVLKKV 327
+GAS P+ V+ V+ K+
Sbjct: 279 AGASAPEVLVKGVIDKL 295
>gi|393759426|ref|ZP_10348241.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Alcaligenes
faecalis subsp. faecalis NCIB 8687]
gi|393162315|gb|EJC62374.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Alcaligenes
faecalis subsp. faecalis NCIB 8687]
Length = 323
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 138/314 (43%), Gaps = 64/314 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V + L I K+ D G +V+ A G + +
Sbjct: 42 IYVRHEIVHNRYVVEDLRSKGAIFI------KELDEAPAGAIVIFSAHGVSRQVRDEAER 95
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V + + I+ G H E T
Sbjct: 96 RGLKVFDATCPLVTKVHIEVSRMRAEGREIIMIGHVGHPEVEGTL--------------- 140
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
G+ +G E + K V+ DPD K+ QTT+ + +
Sbjct: 141 ---------GQADGGMYLVETPEDVAKLNVA---DPD----KLAFVTQTTL----SVDDA 180
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+V + + +F + E S IC ATQ RQDA+ K++ + DL+LVVG NSSN++
Sbjct: 181 AVVAQALRERF--PTIVEPKKS--DICYATQNRQDAV-KIMAPQCDLVLVVGSTNSSNSN 235
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L+E+AE +G +Y +D + I P WL G+ +G+T+GAS P
Sbjct: 236 RLREVAERKGAEAYLLDKPEMIDPA-----------------WL-VGKKRVGVTAGASAP 277
Query: 317 DKAVEDVLKKVFEI 330
+ V V++++ E+
Sbjct: 278 EVLVNQVIQRLQEL 291
>gi|421254563|ref|ZP_15709377.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pasteurella
multocida subsp. multocida str. Anand1_buffalo]
gi|421264431|ref|ZP_15715412.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pasteurella
multocida subsp. multocida str. P52VAC]
gi|425064383|ref|ZP_18467508.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pasteurella
multocida subsp. gallicida X73]
gi|425066539|ref|ZP_18469659.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pasteurella
multocida subsp. gallicida P1059]
gi|401688193|gb|EJS83835.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pasteurella
multocida subsp. multocida str. P52VAC]
gi|401692165|gb|EJS86767.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pasteurella
multocida subsp. multocida str. Anand1_buffalo]
gi|404381133|gb|EJZ77616.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pasteurella
multocida subsp. gallicida X73]
gi|404381327|gb|EJZ77804.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pasteurella
multocida subsp. gallicida P1059]
Length = 314
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 140/323 (43%), Gaps = 63/323 (19%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L E I VEE V G +V+ A G + N
Sbjct: 33 IYVRHEVVHNRFVVNGLRERGA--IFVEE----LHEVPDGAIVIFSAHGVSQAVRQEAKN 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+N+++ D TCP V+KV V + + +I+ G H E T G+Y
Sbjct: 87 RNLKVFDATCPLVTKVHMQVARASRKGTKAILIGHEGHPEVEGTM---GQY--------- 134
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
D GG +E + G + DL QTT+ +T E+
Sbjct: 135 ----DNPEGGIF---------LVESVEDIAKLGLRQEDDLT---FMTQTTLSIDDTSEV- 177
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+E + ++ + N IC AT RQ A+ ++ ++ DL++VVG NSSN++
Sbjct: 178 --IEALKQKYPAIQGPRK-----NDICYATTNRQQAVRELAQQS-DLVIVVGSKNSSNSN 229
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L E+A G+ S ID I P +WL + TIGIT+GAS P
Sbjct: 230 RLAELASRMGVVSKLIDDANDIDP-----------------SWL-ENVTTIGITAGASAP 271
Query: 317 DKAVEDVLKKVFE--IKREEALQ 337
+ V+ V+K++ E + R E LQ
Sbjct: 272 EVLVQSVVKRLQELGVTRVEELQ 294
>gi|344170253|emb|CCA82652.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [blood disease
bacterium R229]
Length = 322
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 135/311 (43%), Gaps = 64/311 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V L + ++ D V G V+ A G +
Sbjct: 47 IYVRHEIVHNAYVVSDLRSKGAVFV------QELDDVPVGGTVIFSAHGVSRAVREAAEA 100
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V K + + I+ G H E T A +++ ++
Sbjct: 101 RGLRVFDATCPLVTKVHVEVSKMRAQGFEIIMIGHKGHPEVEGTMGQADDGMLL--VESV 158
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
+ V ++ D ++ QTT+ ET+EI
Sbjct: 159 DDVARLVVN-----------------------------DPARLAYVTQTTLSVDETQEI- 188
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
V R V H IC ATQ RQDA+ K + +V++++VVG NSSN++
Sbjct: 189 --VAAIKARFPAV-----HEPKKQDICYATQNRQDAV-KFMAPQVEVVIVVGSPNSSNSN 240
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L+E+AE G+P+Y +D+ +++ P WL G+ +G+T+GAS P
Sbjct: 241 RLRELAEKLGVPAYMVDTPEQVRP-----------------EWL-AGKRRVGLTAGASAP 282
Query: 317 DKAVEDVLKKV 327
++ + ++ ++
Sbjct: 283 EELAQSIVDRL 293
>gi|417851759|ref|ZP_12497446.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pasteurella
multocida subsp. gallicida str. Anand1_poultry]
gi|338218608|gb|EGP04366.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pasteurella
multocida subsp. gallicida str. Anand1_poultry]
Length = 314
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 140/323 (43%), Gaps = 63/323 (19%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L E I VEE V G +V+ A G + N
Sbjct: 33 IYVRHEVVHNRFVVNGLRERGA--IFVEE----LHEVPDGAIVIFSAHGVSQAVRQEAKN 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+N+++ D TCP V+KV V + + +I+ G H E T G+Y
Sbjct: 87 RNLKVFDATCPLVTKVHMQVARASRKGTKAILIGHEGHPEVEGTM---GQY--------- 134
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
D GG +E + G + DL QTT+ +T E+
Sbjct: 135 ----DNPEGGIF---------LVESVEDIAKLGLRQEDDLT---FMTQTTLSIDDTSEV- 177
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+E + ++ + N IC AT RQ A+ ++ ++ DL++VVG NSSN++
Sbjct: 178 --IEALKQKYPAIQGPRK-----NDICYATTNRQQAVRELAQQS-DLVIVVGSKNSSNSN 229
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L E+A G+ S ID I P +WL + TIGIT+GAS P
Sbjct: 230 RLAELASRMGVVSKLIDDTNDIDP-----------------SWL-ENVTTIGITAGASAP 271
Query: 317 DKAVEDVLKKVFE--IKREEALQ 337
+ V+ V+K++ E + R E LQ
Sbjct: 272 EVLVQSVVKRLQELGVTRVEELQ 294
>gi|302036229|ref|YP_003796551.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Candidatus
Nitrospira defluvii]
gi|300604293|emb|CBK40625.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Candidatus
Nitrospira defluvii]
Length = 320
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 137/309 (44%), Gaps = 66/309 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+H+ V L + VEE + V +G VV+ A G A +
Sbjct: 33 IYVRHEIVHSRHVVNSLRHKGA--VFVEE----LNEVPEGSVVIFSAHGVAKSVWEEAQS 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKE 135
+ + ++D TCP V KV V + Y I+ G H E + T K+ +V ++++
Sbjct: 87 RRLHVIDATCPLVIKVHNEVNRDYTQGYELILIGHAGHPEVIGTLGQIPDKFHLVSSVRD 146
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
E + +EK + + QTT+ +E
Sbjct: 147 VESL------------------HVEKTQN--------------LSYVTQTTL---SVDEC 171
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
+VE R ++ ++ IC ATQ RQ+A+ K + + VD+ILV+G NSSN+
Sbjct: 172 RDIVEALHRRFPNIKGPHQ-----EDICYATQNRQNAV-KSLSKLVDVILVIGSPNSSNS 225
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L+E+ E GIPSY ID+ I P +WL K ++G+++GAS
Sbjct: 226 NRLRELGEHCGIPSYLIDAASDINP-----------------DWL-KDAKSVGLSAGASA 267
Query: 316 PDKAVEDVL 324
P+ V +V+
Sbjct: 268 PEVLVTEVV 276
>gi|283778390|ref|YP_003369145.1| hydroxymethylbutenyl pyrophosphate reductase [Pirellula staleyi DSM
6068]
gi|283436843|gb|ADB15285.1| hydroxymethylbutenyl pyrophosphate reductase [Pirellula staleyi DSM
6068]
Length = 316
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 136/309 (44%), Gaps = 64/309 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V + + + V +G ++ A G + +
Sbjct: 36 VYVYHEIVHNKYVVDTFKSKGAVFV------DHLEEVPEGSTLLFSAHGVSPAIRKLARD 89
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ + +D TCP V+KV K K YT ++ G H+E + T A + I+ + E+
Sbjct: 90 RKLTAIDATCPLVTKVHLEAIKFAKEGYTIVLIGHEGHDEVIGTMGEAPEAIV---LVES 146
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
+ D L +TK A+L + +V D + + G+ + + G +E
Sbjct: 147 QAEID-----ALPFDDTTKLAYLTQTTLSVD-----DANRIIRGLKARFPQIVGPPKE-- 194
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
IC ATQ RQ+A++ + EE D++LV+G NSSN+
Sbjct: 195 ------------------------DICYATQNRQEAVHLLAEE-ADIVLVLGSQNSSNSQ 229
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L+EIA++ G P+Y ID + I HGE W Q T+ IT+GAS P
Sbjct: 230 RLKEIAKEHGKPAYLIDGAQDI-----------HGE------WFSDAQ-TVLITAGASAP 271
Query: 317 DKAVEDVLK 325
+ V++V++
Sbjct: 272 ESVVQEVVE 280
>gi|375102392|ref|ZP_09748655.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Saccharomonospora cyanea NA-134]
gi|374663124|gb|EHR63002.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Saccharomonospora cyanea NA-134]
Length = 334
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 137/318 (43%), Gaps = 73/318 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ EI+HN V + L E V I V+E + V +G +VV A G +
Sbjct: 51 VYVRKEIVHNKHVVETLRERGV--IFVDETSE----VPEGALVVFSAHGVSPAVHAEAAE 104
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+N++ +D TCP V+KV V + + DY ++ G HEE T+ A ++ + + E
Sbjct: 105 RNLRTIDATCPLVTKVHKEVNRFARDDYDILLIGHEGHEEVEGTSGEAPDHVQLVDTPE- 163
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
DVD V V ++ L T
Sbjct: 164 ------------------------------------DVDKVTVRDPSKVVWLSQTTLS-- 185
Query: 197 KLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGGWN 251
V++TM R V + E F + IC AT RQ A+ M E DL+LVVG N
Sbjct: 186 --VDETMER---VNQLKERFPELADPPSDDICYATSNRQVAVKAMAAE-CDLVLVVGSRN 239
Query: 252 SSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITS 311
SSN+ L E+A + G K A+ + + V++E WL KG TIG+TS
Sbjct: 240 SSNSKRLVEVA---------------LQAGAKDAHLIDYAREVDEE-WL-KGAETIGVTS 282
Query: 312 GASTPDKAVEDVLKKVFE 329
GAS PD V ++L + E
Sbjct: 283 GASVPDVLVLELLDHLAE 300
>gi|219109330|pdb|3DNF|A Chain A, Structure Of (e)-4-hydroxy-3-methyl-but-2-enyl Diphosphate
Reductase, The Terminal Enzyme Of The Non-mevalonate
Pathway
gi|219109331|pdb|3DNF|B Chain B, Structure Of (e)-4-hydroxy-3-methyl-but-2-enyl Diphosphate
Reductase, The Terminal Enzyme Of The Non-mevalonate
Pathway
Length = 297
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 144/319 (45%), Gaps = 74/319 (23%)
Query: 16 KIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLN 75
K++ IIHNP RL+ + V EE K+ GD V++ + G E+ L
Sbjct: 33 KVYTLGPIIHNPQEVNRLKNLGVFPSQGEEFKE-------GDTVIIRSHGIPPEKEEALR 85
Query: 76 NKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA----GKYIIVK 131
K ++++D TCP+V V +V + + Y ++ G+ +H E + T + GK I+V+
Sbjct: 86 KKGLKVIDATCPYVKAVHEAVCQLTREGYFVVLVGEKNHPEVIGTLGYLRACNGKGIVVE 145
Query: 132 NMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGE 191
+++ G + E +VGI QTT +
Sbjct: 146 TLEDI-------------GEALKHE---------------------RVGIVAQTT----Q 167
Query: 192 TEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWN 251
EE K V + V+ V NTIC+AT RQ+++ K+ E VD+++++GG N
Sbjct: 168 NEEFFKEVVGEIA--LWVKEVK----VINTICNATSLRQESVKKLAPE-VDVMIIIGGKN 220
Query: 252 SSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITS 311
S NT L I+++ +Y I++ + + P W +G +GI++
Sbjct: 221 SGNTRRLYYISKELNPNTYHIETAEELQP-----------------EWF-RGVKRVGISA 262
Query: 312 GASTPDKAVEDVLKKVFEI 330
GASTPD +E V ++ EI
Sbjct: 263 GASTPDWIIEQVKSRIQEI 281
>gi|78067300|ref|YP_370069.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
sp. 383]
gi|77968045|gb|ABB09425.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
sp. 383]
Length = 326
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 143/315 (45%), Gaps = 66/315 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V + L++ I VEE + V G+ V+ A G + +
Sbjct: 48 IYVRHEIVHNKYVVEDLKKKGA--IFVEE----LEEVPAGNTVIFSAHGVSKAVRDEADV 101
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ ++I D TCP V+KV V K ++ ++ G H E T + + M
Sbjct: 102 RGLRIYDATCPLVTKVHVEVAKMRQDGVDIVMIGHKGHPEVEGTMGQ-----VERGMHLV 156
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTM-LKGETEEI 195
E V D ++K + A DP+ ++ + QTT+ + E I
Sbjct: 157 ESVED-----------------VQKLELA-----DPE----RIALVTQTTLSVDDAAEII 190
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
G L K + E IC ATQ RQDA+ K + + D+++VVG NSSN+
Sbjct: 191 GAL-------KAKYPKIREP--KKQDICYATQNRQDAV-KFMAPQCDVVIVVGSPNSSNS 240
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
S L+E+AE RG+ +Y +D+ +I P W+ G+ IG+T+GAS
Sbjct: 241 SRLREVAEKRGVDAYMVDAPDQIDPA-----------------WV-AGKRRIGVTAGASA 282
Query: 316 PDKAVEDVLKKVFEI 330
P+ + V+ ++ E+
Sbjct: 283 PEVLAQAVIARLREL 297
>gi|383311776|ref|YP_005364586.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pasteurella
multocida subsp. multocida str. HN06]
gi|380873048|gb|AFF25415.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pasteurella
multocida subsp. multocida str. HN06]
Length = 314
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 139/323 (43%), Gaps = 63/323 (19%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L E I VEE V G +V+ A G + N
Sbjct: 33 IYVRHEVVHNRFVVNGLRERGA--IFVEE----LHEVPDGAIVIFSAHGVSQAVRQEAKN 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+N+++ D TCP V+KV V + + +I+ G H E T G+Y
Sbjct: 87 RNLKVFDATCPLVTKVHMQVARASRKGTKAILIGHEGHPEVEGTM---GQY--------- 134
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
D GG +E + G + DL QTT+ +T E+
Sbjct: 135 ----DNPEGGIF---------LVESVEDIAKLGLRQEDDLT---FMTQTTLSIDDTSEV- 177
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+E + ++ + N IC AT RQ A+ ++ ++ DL++VVG NSSN++
Sbjct: 178 --IEALKQKYPAIQGPRK-----NDICYATTNRQQAVRELAQQS-DLVIVVGSKNSSNSN 229
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L E+A G+ S ID I P WL + TIGIT+GAS P
Sbjct: 230 RLAELASRMGVVSKLIDDANDIDP-----------------TWL-ENVTTIGITAGASAP 271
Query: 317 DKAVEDVLKKVFE--IKREEALQ 337
+ V+ V+K++ E + R E LQ
Sbjct: 272 EVLVQSVVKRLQELGVTRVEELQ 294
>gi|83720986|ref|YP_441339.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
thailandensis E264]
gi|167580125|ref|ZP_02372999.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
thailandensis TXDOH]
gi|167618189|ref|ZP_02386820.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
thailandensis Bt4]
gi|257139987|ref|ZP_05588249.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
thailandensis E264]
gi|83654811|gb|ABC38874.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
thailandensis E264]
Length = 326
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 145/316 (45%), Gaps = 68/316 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V + L++ I VEE + V G+ V+ A G +
Sbjct: 48 IYVRHEIVHNKYVVEDLKKKGA--IFVEE----LEEVPSGNTVIFSAHGVSKAVRDEAAV 101
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ ++I D TCP V+KV V K ++ ++ G H E T + + M
Sbjct: 102 RGLRIYDATCPLVTKVHVEVAKMRQEGVDIVMIGHKGHPEVEGTMGQ-----VERGMHLV 156
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTM-LKGETEEI 195
E V D +L EL DP+ +V + QTT+ + E I
Sbjct: 157 ESVED-VLKLELP---------------------DPE----RVALVTQTTLSVDDAAEII 190
Query: 196 GKLVEK-TMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
G L K +R+ ++ IC ATQ RQDA+ K + + D+++VVG NSSN
Sbjct: 191 GALKAKFPAIREPKKQD----------ICYATQNRQDAV-KFMAPQCDVVIVVGSPNSSN 239
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
+S L+E+AE RG+ +Y +D+ ++I P W+ G+ IG+T+GAS
Sbjct: 240 SSRLREVAEKRGVAAYMVDAPEQIDPA-----------------WV-AGKRRIGVTAGAS 281
Query: 315 TPDKAVEDVLKKVFEI 330
P+ + V+ ++ E+
Sbjct: 282 APEVLAQAVIARLREL 297
>gi|15603529|ref|NP_246603.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pasteurella
multocida subsp. multocida str. Pm70]
gi|378775685|ref|YP_005177928.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pasteurella
multocida 36950]
gi|386835540|ref|YP_006240859.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pasteurella
multocida subsp. multocida str. 3480]
gi|13431628|sp|P57960.1|ISPH_PASMU RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|12722070|gb|AAK03748.1| LytB [Pasteurella multocida subsp. multocida str. Pm70]
gi|356598233|gb|AET16959.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pasteurella
multocida 36950]
gi|385202245|gb|AFI47100.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pasteurella
multocida subsp. multocida str. 3480]
Length = 314
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 139/323 (43%), Gaps = 63/323 (19%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L E I VEE V G +V+ A G + N
Sbjct: 33 IYVRHEVVHNRFVVNGLRERGA--IFVEE----LHEVPDGAIVIFSAHGVSQAVRQEAKN 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+N+++ D TCP V+KV V + + +I+ G H E T G+Y
Sbjct: 87 RNLKVFDATCPLVTKVHMQVARASRKGTKAILIGHEGHPEVEGTM---GQY--------- 134
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
D GG +E + G + DL QTT+ +T E+
Sbjct: 135 ----DNPEGGIF---------LVESVEDIAKLGLRQEDDLT---FMTQTTLSIDDTSEV- 177
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+E + ++ + N IC AT RQ A+ ++ ++ DL++VVG NSSN++
Sbjct: 178 --IEALKQKYPAIQGPRK-----NDICYATTNRQQAVRELAQQS-DLVIVVGSKNSSNSN 229
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L E+A G+ S ID I P WL + TIGIT+GAS P
Sbjct: 230 RLAELASRMGVVSKLIDDANDIDP-----------------TWL-ENVTTIGITAGASAP 271
Query: 317 DKAVEDVLKKVFE--IKREEALQ 337
+ V+ V+K++ E + R E LQ
Sbjct: 272 EVLVQSVVKRLQELGVTRVEELQ 294
>gi|380510665|ref|ZP_09854072.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Xanthomonas
sacchari NCPPB 4393]
Length = 316
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 135/324 (41%), Gaps = 61/324 (18%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L++ I VEE D V G+ V+ A G A
Sbjct: 33 IYVRHEVVHNRFVVDDLKQRGA--IFVEE----LDEVPDGNTVIFSAHGVAQAVRQEAER 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V +H + ++ G H E T
Sbjct: 87 RGLKVFDATCPLVTKVHFEVARHCRAGRDVVLIGHAGHPEVEGTM--------------- 131
Query: 137 EYVCDYILGGELNGSSSTKEAFL-EKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
G+ + T +L E ++ + +L QTT+ +T I
Sbjct: 132 ---------GQWDRECGTGRIYLVEDIEQVATLHVQQPENL---AYTTQTTLSVDDTRGI 179
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
+ + G +N + IC ATQ RQDA+ + E DL+LVVG NSSN+
Sbjct: 180 IEALRARYPAMQGPKN--------DDICYATQNRQDAVRDLARE-CDLVLVVGSPNSSNS 230
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L E+A G+ SY ID I P W+ G+ +G+T+GAS
Sbjct: 231 NRLSELARRDGVESYLIDGADEIDPA-----------------WI-AGKRRVGLTAGASA 272
Query: 316 PDKAVEDVLKKVFEIKREEALQLA 339
P V+ V+ ++ E+ + +LA
Sbjct: 273 PQVLVDGVIARLRELGADGVSELA 296
>gi|375264515|ref|YP_005021958.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio sp.
EJY3]
gi|369839839|gb|AEX20983.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio sp.
EJY3]
Length = 317
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 141/318 (44%), Gaps = 67/318 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L++ I VEE V ++V+ A G +
Sbjct: 33 IYVRHEVVHNRFVVEGLKQRGA--IFVEE----LHEVPDNNIVIFSAHGVSQAVRQEAKQ 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT----ASFAGKYIIVKN 132
+++ + D TCP V+KV V + + + ++ G H E T AS G +V+
Sbjct: 87 RDLTVFDATCPLVTKVHMEVARASRRNMEVVLIGHAGHPEVEGTMGQYASETGGMYLVET 146
Query: 133 MKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGET 192
A +EK K V DP DL V +QTT+ ET
Sbjct: 147 -----------------------PADVEKLKAIVK---DPS-DLHYV---SQTTLSVDET 176
Query: 193 EEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNS 252
++ + + + G + IC ATQ RQDA+ +M E VD+++VVG NS
Sbjct: 177 ADVIEELRRVFPDIQGPRK--------DDICYATQNRQDAVREMASE-VDVMVVVGSKNS 227
Query: 253 SNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSG 312
SN++ L+E+AE G P Y D + I P W G+ +G+T+G
Sbjct: 228 SNSTRLKELAEKLGTPGYLTDCPEDIKP-----------------EWF-DGKTKVGVTAG 269
Query: 313 ASTPDKAVEDVLKKVFEI 330
AS P++ V +L+++ E+
Sbjct: 270 ASAPEELVNQILERIKEM 287
>gi|170758634|ref|YP_001787128.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
botulinum A3 str. Loch Maree]
gi|169405623|gb|ACA54034.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase / ribosomal
protein S1 homolog [Clostridium botulinum A3 str. Loch
Maree]
Length = 638
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 145/328 (44%), Gaps = 74/328 (22%)
Query: 16 KIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLN 75
KI+ +IHN V L++ ++ I +++ D +NK D +++ + G ++ + L
Sbjct: 32 KIYTLGPLIHNNDVVNLLKDKGIEPISIQD----VDKLNKDDTIIIRSHGVPLQTINYLK 87
Query: 76 NKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKE 135
+K + +++TTCP V+ + +K+ + Y +I G +H E + + I+
Sbjct: 88 DKGLNVINTTCPHVANIQIKAKKYYEEGYKIVIVGDENHPEVIGINGWCNNSAIISKD-- 145
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
G +N L+K KV + QTT + E++
Sbjct: 146 ---------GANINN--------LDK----------------KVCVLCQTTEKQENWEKV 172
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
++ K + ++FNTIC+ATQ RQ A K+ EKVD ++V+GG NSSNT
Sbjct: 173 LTILIKN----------SREILAFNTICNATQVRQQAAKKL-SEKVDSMIVIGGKNSSNT 221
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L EI + + +++ K I + K IG+T+GAST
Sbjct: 222 TKLYEICKSNCKNTIHVENAKEIPE------------------HIYKNSNIIGVTAGAST 263
Query: 316 PDKAVEDVLKK------VFEIKREEALQ 337
PD +++ + K + E+ + E L
Sbjct: 264 PDWIIKEAINKMNNNDSIIEVSKNEMLN 291
>gi|170754879|ref|YP_001781355.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
botulinum B1 str. Okra]
gi|429246339|ref|ZP_19209669.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding
domain protein [Clostridium botulinum CFSAN001628]
gi|169120091|gb|ACA43927.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase / ribosomal
protein S1 homolog [Clostridium botulinum B1 str. Okra]
gi|428756649|gb|EKX79191.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding
domain protein [Clostridium botulinum CFSAN001628]
Length = 638
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 148/334 (44%), Gaps = 74/334 (22%)
Query: 10 KQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVE 69
K+ + KI+ +IHN V L++ ++ I +++ D +NK D +++ + G ++
Sbjct: 26 KENLKSKIYTLGPLIHNNDVVNLLKDKGIEPISIQD----VDKLNKDDTIIIRSHGVPLQ 81
Query: 70 EMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYII 129
+ L +K + +++TTCP V+ + +K+ + Y +I G +H E + + I
Sbjct: 82 TINYLKDKGLNVINTTCPHVANIQIKAKKYYEEGYKIVIVGDENHPEVIGINGWCNNSAI 141
Query: 130 VKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLK 189
+ G +N L+K KV + QTT +
Sbjct: 142 ISKD-----------GANINN--------LDK----------------KVCVLCQTTEKQ 166
Query: 190 GETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGG 249
E++ ++ K + ++FNTIC+ATQ RQ A K+ EKVD ++V+GG
Sbjct: 167 ENWEKVLTILIKN----------SREILAFNTICNATQVRQQAAKKL-SEKVDSMIVIGG 215
Query: 250 WNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGI 309
NSSNT+ L EI + + +++ K I + K IG+
Sbjct: 216 KNSSNTTKLYEICKSNCKNTIHVENAKEIPE------------------HIYKNSNIIGV 257
Query: 310 TSGASTPDKAVEDVLKK------VFEIKREEALQ 337
T+GASTPD +++ + K + E+ + E L
Sbjct: 258 TAGASTPDWIIKEAINKMNNNDSIIEVSKNEMLN 291
>gi|388600508|ref|ZP_10158904.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio
campbellii DS40M4]
gi|444427190|ref|ZP_21222582.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio
campbellii CAIM 519 = NBRC 15631]
gi|444239560|gb|ELU51122.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio
campbellii CAIM 519 = NBRC 15631]
Length = 317
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 148/320 (46%), Gaps = 59/320 (18%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L++ I VEE V ++V+ A G + +
Sbjct: 33 IYVRHEVVHNRFVVEGLKQRGA--IFVEE----LHEVPDNNIVIFSAHGVSQAVRQEAKS 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++ + D TCP V+KV V + + + ++ G H E T G+Y +
Sbjct: 87 RDLTVFDATCPLVTKVHMEVARASRRNMEVVLIGHAGHPEVEGTM---GQY-------SS 136
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
E Y++ A +EK K V DP DL V +QTT+ ET ++
Sbjct: 137 ETGGMYLV---------ETPADVEKLKSIVK---DPS-DLHYV---SQTTLSVDETADVI 180
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+ + + G + IC ATQ RQDA+ ++ + VD+++VVG NSSN++
Sbjct: 181 EELRRVFPEIQGPRK--------DDICYATQNRQDAVRELSAD-VDVMVVVGSKNSSNST 231
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L+E+AE G P Y D + I P W +G++ +G+T+GAS P
Sbjct: 232 RLKELAEKLGTPGYLTDCPEDIKP-----------------EWF-EGKVKVGVTAGASAP 273
Query: 317 DKAVEDVLKKVFEIKREEAL 336
++ V +L ++ E+ EA+
Sbjct: 274 EELVNQILDRIKELVGAEAV 293
>gi|408823186|ref|ZP_11208076.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
geniculata N1]
Length = 316
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 135/316 (42%), Gaps = 63/316 (19%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L++ I VEE D V + V+ A G + +
Sbjct: 33 IYVRHEVVHNRFVVDDLKQRGA--IFVEE----LDEVPDNNTVIFSAHGVSQAVRQEADR 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V +H + ++ G H E T
Sbjct: 87 RGLKVFDATCPLVTKVHFEVARHCRAGRDVVLIGHAGHPEVEGTM--------------- 131
Query: 137 EYVCDYILGGELNGSSSTKEAFL-EKFKKAVSKGFD-PDVDLVKVGIANQTTMLKGETEE 194
G+ N + T + +L E ++ + + P+ QTT+ +T
Sbjct: 132 ---------GQWNREAGTGQIYLVEDVEQVATLHINQPE----NFAYTTQTTLSVDDTRG 178
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
I + + G +N + IC ATQ RQDA+ + + + DL+LVVG NSSN
Sbjct: 179 IIDALRERFPAMQGPKN--------DDICYATQNRQDAVRDLAK-RCDLVLVVGSPNSSN 229
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
++ L E+A G+ SY ID I P W+ G+ IG+T+GAS
Sbjct: 230 SNRLSELARREGVESYLIDGAHEIDPA-----------------WV-AGKQHIGVTAGAS 271
Query: 315 TPDKAVEDVLKKVFEI 330
P V+ VL ++ E+
Sbjct: 272 APQVLVDGVLARLAEL 287
>gi|338740582|ref|YP_004677544.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Hyphomicrobium
sp. MC1]
gi|337761145|emb|CCB66978.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Hyphomicrobium
sp. MC1]
Length = 309
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 137/314 (43%), Gaps = 70/314 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAA--VEEMVTL 74
+++ +EI+HN V + L+ + + + DV N G V + A G + VE+ L
Sbjct: 33 VYVRHEIVHNRHVVEDLKAKGARFV-----EDLADVPN-GSVTIFSAHGVSHSVEDEARL 86
Query: 75 NNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-ASFAGKYIIVKNM 133
NV VD TCP VSKV +++ T I+ G H E T +G +V+N
Sbjct: 87 RRLNV--VDATCPLVSKVHKQGQRYSSLGRTIILIGHAGHVEIEGTLGRISGPVYLVENG 144
Query: 134 KEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETE 193
++ +L+ T A++ QTT+ +T
Sbjct: 145 EDV---------AKLDIPDDTPVAYI-----------------------TQTTLSVDDTR 172
Query: 194 EIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSS 253
+ V+K G E + IC ATQ RQ A+ + V+L+LVVG NSS
Sbjct: 173 STIEAVKKRFTDVIGPETRD--------ICYATQNRQTAVRDLCRH-VELLLVVGASNSS 223
Query: 254 NTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGA 313
N++ L+EI + G+PSY + G+K+ WL G T+G+T+GA
Sbjct: 224 NSNRLREIGSECGVPSYL------VADGSKVDLA-----------WL-AGVATVGVTAGA 265
Query: 314 STPDKAVEDVLKKV 327
S PD V+DVL +
Sbjct: 266 SAPDVLVQDVLAAI 279
>gi|333368106|ref|ZP_08460323.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Psychrobacter
sp. 1501(2011)]
gi|332977843|gb|EGK14597.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Psychrobacter
sp. 1501(2011)]
Length = 318
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 153/327 (46%), Gaps = 67/327 (20%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
I EA +F E I++ +E++HN V L + VEE + V G +V+ A
Sbjct: 21 IVNEALTRF-EPPIYVRHEVVHNKFVVSDLANRGA--VFVEELHE----VPDGSIVIFSA 73
Query: 64 FGA--AVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT- 120
G AVE+ +++ + D TCP V+KV V K + + +I+ G + H E T
Sbjct: 74 HGVSKAVED--EAERRDLTVFDATCPLVTKVHIEVAKFARDNMDAILIGHHGHPEVEGTM 131
Query: 121 ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVG 180
F+ +Y GGE+ EA +EK + + +PD ++
Sbjct: 132 GRFSAQY-----------------GGEI--YLVENEADVEKLEVS-----NPD----RLA 163
Query: 181 IANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEK 240
QTT+ +T +V + +KF N + IC ATQ RQDA+ K + +
Sbjct: 164 FVTQTTLSMDDT----AVVIDALRKKFP----NIQGPRKDDICYATQNRQDAV-KDLASR 214
Query: 241 VDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWL 300
+++LVVG NSSN++ L+E+AE +Y ID+ GE+ K+ W
Sbjct: 215 CEVVLVVGSPNSSNSNRLRELAERMDCRAYLIDNA---------------GEM--KKEWF 257
Query: 301 PKGQITIGITSGASTPDKAVEDVLKKV 327
G +G+T+GAS P+ +++VL+++
Sbjct: 258 -DGVEAVGVTAGASAPEILIQEVLQQL 283
>gi|384108769|ref|ZP_10009659.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Treponema sp. JC4]
gi|383869740|gb|EID85349.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Treponema sp. JC4]
Length = 280
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 149/324 (45%), Gaps = 68/324 (20%)
Query: 5 AYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAF 64
A +A + + +K++ +IHN V + L+ ++ + + Q + V VV++ A
Sbjct: 22 AEKALEDYSGKKVYSLGPLIHNEIVLQNLKNKGLEIL----SEDQLEKVEAKSVVIIRAH 77
Query: 65 GAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA 124
G + + L +K+ I++ TCP V+ +V+K T I+ G +H E A +A
Sbjct: 78 GVSPDVTNALEDKDCVIINATCPRVNANQITVQKASSKGKTIILTGDSNHGEVKGVAGYA 137
Query: 125 -GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
GK+I+++N K+A+ A E +A+ + +
Sbjct: 138 QGKFILLQNEKDAQ-------------------ALKEDDGEAI--------------LLS 164
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTT + E+I ++V +K+ +N NTIC AT+ERQD++ + +VD
Sbjct: 165 QTTFSPVQFEKISQIVG----QKYKNLKIN------NTICPATKERQDSLIDLCS-RVDG 213
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
+LV+GG NS+NT L + AE + I S + I P A++
Sbjct: 214 VLVIGGKNSANTIRLFQTAEKNCPHAAHIQSAEEI-PQEFFAFE---------------- 256
Query: 304 QITIGITSGASTPDKAVEDVLKKV 327
+GIT+GASTPD +E V K +
Sbjct: 257 --RVGITAGASTPDVIIEQVEKAL 278
>gi|148652390|ref|YP_001279483.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Psychrobacter
sp. PRwf-1]
gi|172048503|sp|A5WCZ2.1|ISPH_PSYWF RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|148571474|gb|ABQ93533.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Psychrobacter
sp. PRwf-1]
Length = 318
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 152/327 (46%), Gaps = 67/327 (20%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
I EA +F E I++ +E++HN V L + VEE V G +V+ A
Sbjct: 21 IVNEALARF-EPPIYVRHEVVHNKFVVSDLANRGA--VFVEE----LHEVPDGSIVIFSA 73
Query: 64 FGA--AVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT- 120
G AVE+ +++ + D TCP V+KV V K + +++ G H E T
Sbjct: 74 HGVSKAVED--EAERRDLTVFDATCPLVTKVHIEVAKFAREKMDAVLIGHQGHPEVEGTM 131
Query: 121 ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVG 180
F+ +Y GGE++ + EA +EK + + DPD ++
Sbjct: 132 GRFSAQY-----------------GGEIHLVEN--EADVEKLEVS-----DPD----RLA 163
Query: 181 IANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEK 240
QTT+ +T +V + +KF N + IC ATQ RQDA+ K + ++
Sbjct: 164 FVTQTTLSMDDT----AVVIDALRKKFP----NIQGPRKDDICYATQNRQDAV-KDLAQR 214
Query: 241 VDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWL 300
+++LVVG NSSN++ L+E+AE +Y ID+ GE+ K+ W
Sbjct: 215 CEVVLVVGSPNSSNSNRLRELAERMNCKAYLIDNA---------------GEM--KKEWF 257
Query: 301 PKGQITIGITSGASTPDKAVEDVLKKV 327
G +G+T+GAS P+ +++VL ++
Sbjct: 258 -AGVGAVGVTAGASAPEILIQEVLNQL 283
>gi|15606811|ref|NP_214191.1| LytB protein [Aquifex aeolicus VF5]
gi|8928180|sp|O67625.1|ISPH_AQUAE RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|2984055|gb|AAC07596.1| LytB protein [Aquifex aeolicus VF5]
Length = 289
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 144/319 (45%), Gaps = 74/319 (23%)
Query: 16 KIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLN 75
K++ IIHNP RL+ + V EE K+ GD V++ + G E+ L
Sbjct: 33 KVYTLGPIIHNPQEVNRLKNLGVFPSQGEEFKE-------GDTVIIRSHGIPPEKEEALR 85
Query: 76 NKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA----GKYIIVK 131
K ++++D TCP+V V +V + + Y ++ G+ +H E + T + GK I+V+
Sbjct: 86 KKGLKVIDATCPYVKAVHEAVCQLTREGYFVVLVGEKNHPEVIGTLGYLRACNGKGIVVE 145
Query: 132 NMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGE 191
+++ G + E +VGI QTT +
Sbjct: 146 TLEDI-------------GEALKHE---------------------RVGIVAQTT----Q 167
Query: 192 TEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWN 251
EE K V + V+ V NTIC+AT RQ+++ K+ E VD+++++GG N
Sbjct: 168 NEEFFKEVVGEIA--LWVKEVK----VINTICNATSLRQESVKKLAPE-VDVMIIIGGKN 220
Query: 252 SSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITS 311
S NT L I+++ +Y I++ + + P W +G +GI++
Sbjct: 221 SGNTRRLYYISKELNPNTYHIETAEELQP-----------------EWF-RGVKRVGISA 262
Query: 312 GASTPDKAVEDVLKKVFEI 330
GASTPD +E V ++ EI
Sbjct: 263 GASTPDWIIEQVKSRIQEI 281
>gi|389794677|ref|ZP_10197823.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Rhodanobacter
fulvus Jip2]
gi|388431891|gb|EIL88931.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Rhodanobacter
fulvus Jip2]
Length = 320
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 147/317 (46%), Gaps = 72/317 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V ++L A + VEE V G V+ A G +
Sbjct: 33 IYVRHEVVHNRYVVEKLR--ADGAVFVEE----LHEVPDGATVIFSAHGVSQGVREEAAQ 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-----ASFAGKYIIVK 131
+++++ D TCP V+KV V + + + ++ G H E T A+ AG+ ++V+
Sbjct: 87 RHLKVFDATCPLVTKVHMEVARLGRIGRSVVLIGHAGHPEVEGTMGQWNAANAGEILLVE 146
Query: 132 NMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGE 191
+ LE K + DP ++ QTT+ +
Sbjct: 147 S--------------------------LECVAKLAPR--DPH----QLSYVTQTTLSVDD 174
Query: 192 TEEIGKLVEKTMMRKF-GVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGW 250
T K + + +KF +E + + IC ATQ RQDA+ ++ + VDL+LVVG
Sbjct: 175 T----KAIIDALRQKFPDIEGPRK-----DDICYATQNRQDAVRRLAD-SVDLMLVVGSV 224
Query: 251 NSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGIT 310
NSSN++ L+E+A+ RG+ S+ ID + I + +WL G IG+T
Sbjct: 225 NSSNSNRLRELAQKRGVRSFLIDGAEHI-----------------ERSWL-DGVNRIGLT 266
Query: 311 SGASTPDKAVEDVLKKV 327
+GAS P+K V DV++++
Sbjct: 267 AGASAPEKLVLDVIERL 283
>gi|189351263|ref|YP_001946891.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
multivorans ATCC 17616]
gi|221199272|ref|ZP_03572316.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
multivorans CGD2M]
gi|221205826|ref|ZP_03578841.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
multivorans CGD2]
gi|221211492|ref|ZP_03584471.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
multivorans CGD1]
gi|421471519|ref|ZP_15919801.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
multivorans ATCC BAA-247]
gi|421480826|ref|ZP_15928421.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
multivorans CF2]
gi|189335285|dbj|BAG44355.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
multivorans ATCC 17616]
gi|221168853|gb|EEE01321.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
multivorans CGD1]
gi|221174664|gb|EEE07096.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
multivorans CGD2]
gi|221180557|gb|EEE12960.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
multivorans CGD2M]
gi|400220387|gb|EJO50929.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
multivorans CF2]
gi|400225358|gb|EJO55530.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
multivorans ATCC BAA-247]
Length = 325
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 141/314 (44%), Gaps = 64/314 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V + L++ I VEE + V G+ V+ A G +
Sbjct: 48 IYVRHEIVHNKYVVEDLKKKGA--IFVEE----LEEVPAGNTVIFSAHGVSKAVRDEAGV 101
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ ++I D TCP V+KV V K ++ ++ G H E T + + M
Sbjct: 102 RGLRIYDATCPLVTKVHVEVAKMRQDGVDIVMIGHKGHPEVEGTMGQ-----VERGMHLV 156
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
E V D ++K + A DP+ ++ + QTT+ + EI
Sbjct: 157 ESVED-----------------VQKLELA-----DPE----RIALVTQTTLSVDDAAEI- 189
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
K + E IC ATQ RQDA+ K + + D+++VVG NSSN+S
Sbjct: 190 -----IAALKAKYPKIREP--KKQDICYATQNRQDAV-KFMAPQCDVVIVVGSPNSSNSS 241
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L+E+AE RG+ +Y +D+ ++I P W+ G+ IG+T+GAS P
Sbjct: 242 RLREVAEKRGVAAYMVDAPEQIDPA-----------------WV-AGKRRIGVTAGASAP 283
Query: 317 DKAVEDVLKKVFEI 330
+ + V+ ++ E+
Sbjct: 284 EVLAQAVIARLREL 297
>gi|302530082|ref|ZP_07282424.1| LytB protein [Streptomyces sp. AA4]
gi|302438977|gb|EFL10793.1| LytB protein [Streptomyces sp. AA4]
Length = 336
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 139/330 (42%), Gaps = 75/330 (22%)
Query: 2 AFIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVL 61
A +A E + +++ EI+HN V L E V I V+E + V +G +VV
Sbjct: 40 AVVAVEKALELYGPPVYVRKEIVHNRHVVDTLRERGV--IFVDETSE----VPEGALVVF 93
Query: 62 PAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATA 121
A G + +N++ +D TCP V+KV V + K DY ++ G HEE TA
Sbjct: 94 SAHGVSPAVHAEAAERNLRTIDATCPLVTKVHKEVNRFAKDDYDILLIGHEGHEEVEGTA 153
Query: 122 SFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGI 181
G + K ++K + DVD V V
Sbjct: 154 ----------------------------GEAPDKVQLVDKPE---------DVDKVDVRD 176
Query: 182 ANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKM 236
++ L T V++TM R V+ + + F + + IC AT RQ A+ M
Sbjct: 177 PSKVIWLSQTTLS----VDETMER---VDQLRDRFPTLSDPPSDDICYATTNRQVAVKAM 229
Query: 237 VEEKVDLILVVGGWNSSNTSHLQEIAEDRGI-PSYWIDSEKRIGPGNKIAYKLMHGELVE 295
E DL+LVVG NSSN+ L E+A G S+ ID +
Sbjct: 230 APE-CDLVLVVGSKNSSNSKRLVEVALKAGASASHLIDFASEV----------------- 271
Query: 296 KENWLPKGQITIGITSGASTPDKAVEDVLK 325
E WL +G T+G+TSGAS PD V D+LK
Sbjct: 272 DEAWL-EGVSTVGVTSGASVPDVLVMDLLK 300
>gi|456064047|ref|YP_007503017.1| hydroxymethylbutenyl pyrophosphate reductase [beta proteobacterium
CB]
gi|455441344|gb|AGG34282.1| hydroxymethylbutenyl pyrophosphate reductase [beta proteobacterium
CB]
Length = 317
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 144/333 (43%), Gaps = 79/333 (23%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
I EA +F I++ +EI+HN V L E + + V KG +VV A
Sbjct: 31 IVNEALTRF-GAPIYVRHEIVHNAYVVNGLREKGAVFV------DELHEVPKGGIVVFSA 83
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
G + E + +Q+ D TCP V+KV V K K +T ++ G H E T
Sbjct: 84 HGVSQEVRQDAEMRGLQVYDATCPLVTKVHLEVVKMCKDGFTVLMIGHAGHPEVEGTMGQ 143
Query: 124 A--GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGI 181
G ++I E V D +L S K AF+
Sbjct: 144 VEEGVHLI-------EKVADV---AQLPFSEHEKMAFV---------------------- 171
Query: 182 ANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKM 236
QTT+ ET+EI V+ + + F + IC ATQ RQDA+ K
Sbjct: 172 -TQTTLSVDETKEI-------------VDALTQKFPNIVQPRKQDICYATQNRQDAV-KF 216
Query: 237 VEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEK 296
+ +V++++VVG SSN++ L+E+AE G+P+Y +D+ +++ +
Sbjct: 217 MAPQVEIVIVVGSKASSNSNRLRELAEKLGVPAYMVDAPEQL-----------------Q 259
Query: 297 ENWLPKGQITIGITSGASTPDKAVEDVLKKVFE 329
W G+ +G+T+GAS P+ +++++ E
Sbjct: 260 AEWF-VGKKRVGLTAGASAPESLALSIVERIQE 291
>gi|434381849|ref|YP_006703632.1| hydroxymethylbutenyl pyrophosphate reductase [Brachyspira
pilosicoli WesB]
gi|404430498|emb|CCG56544.1| hydroxymethylbutenyl pyrophosphate reductase [Brachyspira
pilosicoli WesB]
Length = 577
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 149/329 (45%), Gaps = 69/329 (20%)
Query: 4 IAYEARKQFPE-----EKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDV 58
+ Y K F + E+I++ +IHNP LE+ V+ E+ + V++ V
Sbjct: 15 VKYAVEKTFSQASKSNEEIYVDGHLIHNPQTLDMLEKTGVKT--YEDTEDDMSVLDDKTV 72
Query: 59 VVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETV 118
++ A G + E L+N +IV+ TC +V+K+ V+KH Y I+ G +H E +
Sbjct: 73 II-RAHGISPERREALSNHAKKIVNLTCKYVAKIQALVKKHSSLGYRVIVIGNPTHPEII 131
Query: 119 ATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVK 178
FA +V K+ +EK P+ D K
Sbjct: 132 GVCGFAQDVYVV-----------------------YKDEDIEKL---------PEDD-KK 158
Query: 179 VGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVE 238
I QTT+ K E K V + + K+ N I NTIC+AT++RQ+ + +
Sbjct: 159 TLIVAQTTLQK---ETFNKFVSQ-IQDKYK----NSELIIKNTICEATEQRQNEILD-IA 209
Query: 239 EKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKEN 298
++ D++LV+GG SSNT +L +IA PS++++ + E +EK +
Sbjct: 210 KRNDVVLVIGGSESSNTRNLYKIASSIK-PSFYVEFK----------------EDLEKID 252
Query: 299 WLPKGQITIGITSGASTPDKAVEDVLKKV 327
P +GI +GASTPD +ED+ + +
Sbjct: 253 LTPYKN--VGIMAGASTPDWLIEDIAQTI 279
>gi|374371900|ref|ZP_09629810.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Cupriavidus
basilensis OR16]
gi|373096528|gb|EHP37739.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Cupriavidus
basilensis OR16]
Length = 301
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 136/315 (43%), Gaps = 66/315 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V + L + + ++ D V G V + A G + +
Sbjct: 1 MFVRHEIVHNKHVVEALRHKGARFV------EELDEVPTGAVTIFSAHGVSRDVESDAKT 54
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKE 135
+ + +D TCP V KV T ++ T I+ G H E T GK I+V++ E
Sbjct: 55 RQLHSIDATCPLVIKVHTQGRQYAASGRTVILIGHAGHPEVEGTMGQIPGKVILVQS--E 112
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
AE L+ + T A++ QTT+ +T I
Sbjct: 113 AEVAL-------LDLPTDTPVAYV-----------------------TQTTLSVDDTRNI 142
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
+ G + + IC ATQ RQ A+ ++ ++V++ILV+G NSSN+
Sbjct: 143 IAALSGRFANLVGPDTRD--------ICYATQNRQSAVREL-SKRVEVILVIGATNSSNS 193
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L+EI + G+PSY I + P W+ +G +GIT+GAS
Sbjct: 194 NRLREIGTESGVPSYLIADGSELNP-----------------EWV-RGVEVVGITAGASA 235
Query: 316 PDKAVEDVLKKVFEI 330
P++ V+DV+ + ++
Sbjct: 236 PEEMVKDVIATLRQL 250
>gi|338811526|ref|ZP_08623740.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding
domain protein [Acetonema longum DSM 6540]
gi|337276493|gb|EGO64916.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding
domain protein [Acetonema longum DSM 6540]
Length = 654
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 138/322 (42%), Gaps = 69/322 (21%)
Query: 16 KIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLN 75
KI+ +IHNP V RL Q I V E D +N+G V++ + G E
Sbjct: 32 KIYTLGPLIHNPQVVSRLSR---QGIAVAE---NIDAINQG-TVIIRSHGVGPEVYRRAE 84
Query: 76 NKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKE 135
K + IVD TCP V K + + Y II G H E + ++AG IV +E
Sbjct: 85 AKGLTIVDATCPHVKKAQQAAARLAASGYQVIILGDADHPEVKSIIAWAGSDPIVIGSEE 144
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
+ A L F K +G+ QTT + E+
Sbjct: 145 -------------------QAAELPVFPK--------------LGVVAQTTF----SIEL 167
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
+ + K ++ TIC AT RQ K+ + VD+++VVGG NS+NT
Sbjct: 168 FDCILAVLQTKCQEIQID------RTICTATDMRQQTARKLAGQ-VDVMVVVGGKNSANT 220
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+HL ++ G+ +Y I++ + K++W +G +GIT+GAST
Sbjct: 221 THLADLCRQTGVKTYHIETASEL-----------------KQHWF-EGARQVGITAGAST 262
Query: 316 PDKAVEDVLKKVFEIKREEALQ 337
P +E+V + ++++++ L+
Sbjct: 263 PQWIIEEVYTTMQQMEQDDRLK 284
>gi|156973302|ref|YP_001444209.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio harveyi
ATCC BAA-1116]
gi|156524896|gb|ABU69982.1| hypothetical protein VIBHAR_00983 [Vibrio harveyi ATCC BAA-1116]
Length = 321
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 148/320 (46%), Gaps = 59/320 (18%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L++ I VEE V ++V+ A G + +
Sbjct: 37 IYVRHEVVHNRFVVEGLKQRGA--IFVEE----LHEVPDDNIVIFSAHGVSQAVRQEAKS 90
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++ + D TCP V+KV V + + + ++ G H E T G+Y +
Sbjct: 91 RDLTVFDATCPLVTKVHMEVARASRRNMEVVLIGHAGHPEVEGTM---GQY-------SS 140
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
E Y++ A +EK K V DP DL V +QTT+ ET ++
Sbjct: 141 ETGGMYLV---------ETPADVEKLKSIVK---DPS-DLHYV---SQTTLSVDETADVI 184
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+ + + G + IC ATQ RQDA+ ++ + VD+++VVG NSSN++
Sbjct: 185 EELRRVFPEIQGPRK--------DDICYATQNRQDAVRELSAD-VDVMVVVGSKNSSNST 235
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L+E+AE G P Y D + I P W +G++ +G+T+GAS P
Sbjct: 236 RLKELAEKLGTPGYLTDCPEDIKP-----------------EWF-EGKVKVGVTAGASAP 277
Query: 317 DKAVEDVLKKVFEIKREEAL 336
++ V +L ++ E+ EA+
Sbjct: 278 EELVNQILDRIKELVGAEAV 297
>gi|161523975|ref|YP_001578987.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia
multivorans ATCC 17616]
gi|160341404|gb|ABX14490.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia
multivorans ATCC 17616]
Length = 496
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 142/314 (45%), Gaps = 64/314 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V + L++ I VEE + V G+ V+ A G +
Sbjct: 219 IYVRHEIVHNKYVVEDLKKKGA--IFVEE----LEEVPAGNTVIFSAHGVSKAVRDEAGV 272
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ ++I D TCP V+KV V K ++ ++ G H E T + + M
Sbjct: 273 RGLRIYDATCPLVTKVHVEVAKMRQDGVDIVMIGHKGHPEVEGTMGQ-----VERGMHLV 327
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
E V D ++K + A DP+ ++ + QTT+ + EI
Sbjct: 328 ESVED-----------------VQKLELA-----DPE----RIALVTQTTLSVDDAAEII 361
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+ K + E IC ATQ RQDA+ K + + D+++VVG NSSN+S
Sbjct: 362 AAL------KAKYPKIRE--PKKQDICYATQNRQDAV-KFMAPQCDVVIVVGSPNSSNSS 412
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L+E+AE RG+ +Y +D+ ++I P W+ G+ IG+T+GAS P
Sbjct: 413 RLREVAEKRGVAAYMVDAPEQIDPA-----------------WV-AGKRRIGVTAGASAP 454
Query: 317 DKAVEDVLKKVFEI 330
+ + V+ ++ E+
Sbjct: 455 EVLAQAVIARLREL 468
>gi|91776781|ref|YP_546537.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Methylobacillus
flagellatus KT]
gi|91710768|gb|ABE50696.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Methylobacillus
flagellatus KT]
Length = 320
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 138/316 (43%), Gaps = 74/316 (23%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L++ I VEE D V G+ V+ A G + +
Sbjct: 45 IYVRHEVVHNKFVVDDLKKKGA--IFVEE----LDEVPAGNTVIFSAHGVSKDVRAEAEA 98
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +Q+ D TCP V+KV V K + I+ G H E T M +A
Sbjct: 99 RGLQVFDATCPLVTKVHLEVAKMRASGKEIIMIGHKGHPEVEGT------------MGQA 146
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI- 195
E GG S A LE DP ++ QTT+ + I
Sbjct: 147 E-------GGMYLVESPEDVAMLEVK--------DPS----QLAYVTQTTLSIDDAAAIV 187
Query: 196 ----GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWN 251
K E T R ++IC ATQ RQDA+ K++ DL++VVG N
Sbjct: 188 SALKAKFPEITPPRS-------------DSICYATQNRQDAV-KVMARDCDLVIVVGSPN 233
Query: 252 SSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITS 311
SSN++ L+E+A+++G+ SY +D+ + P W+ G+ IG+++
Sbjct: 234 SSNSNRLREVAQNQGVESYMVDNASFLDPA-----------------WI-VGKKRIGVSA 275
Query: 312 GASTPDKAVEDVLKKV 327
GAS P+ V++V+ K+
Sbjct: 276 GASAPEVLVQEVINKL 291
>gi|285017719|ref|YP_003375430.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Xanthomonas
albilineans GPE PC73]
gi|283472937|emb|CBA15442.1| probable 4-hydroxy-3-methylbut-2-enyl diphosphate reductase protein
[Xanthomonas albilineans GPE PC73]
Length = 316
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 138/329 (41%), Gaps = 71/329 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L++ I VEE D V G+ V+ A G +
Sbjct: 33 IYVRHEVVHNRFVVDDLKQRGA--IFVEE----LDEVPDGNTVIFSAHGVSQAVRQEAER 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATAS------FAGKYIIV 130
+ +++ D TCP V+KV V +H + ++ G H E T +G+ +V
Sbjct: 87 RGLKVFDATCPLVTKVHFEVARHCRAGRDVVLIGHAGHPEVEGTMGQWDRERGSGRIYLV 146
Query: 131 KNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKG 190
++M++ A LE + + QTT+
Sbjct: 147 EDMEQV--------------------ATLEVQQPQ------------NLAYTTQTTLSVD 174
Query: 191 ETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGW 250
+T I + + G +N + IC ATQ RQDA+ + + DL+LVVG
Sbjct: 175 DTYGIIEALRARYPVMQGPKN--------DDICYATQNRQDAVRDLARQ-CDLVLVVGSP 225
Query: 251 NSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGIT 310
NSSN++ L E+A G+ SY ID I P W+ G+ IG+T
Sbjct: 226 NSSNSNRLSELARRDGVESYLIDGASEIDPA-----------------WV-AGKRRIGLT 267
Query: 311 SGASTPDKAVEDVLKKVFEIKREEALQLA 339
+GAS P V+ V+ ++ E+ E +LA
Sbjct: 268 AGASAPQVLVDGVIARLRELGAEGVSELA 296
>gi|399889650|ref|ZP_10775527.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding
domain protein [Clostridium arbusti SL206]
Length = 641
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 144/314 (45%), Gaps = 70/314 (22%)
Query: 16 KIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLN 75
KI+ ++IHN V K L++ + I + K D++NK D +++ + G + + + L
Sbjct: 33 KIYTLGQLIHNNDVVKYLKDNNIHAIDI----KDVDLLNKTDTIIIRSHGVSPDIIKLLE 88
Query: 76 NKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKE 135
K + IV+ TCP+VSK+ V+K+ + Y +I G H E + + G
Sbjct: 89 EKELSIVNATCPFVSKIHEKVKKYSEDGYKIVIVGDKEHPEIIGINGWCGN--------- 139
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLV--KVGIANQTTMLKGETE 193
KA+ F ++D V K+ + QTT E +
Sbjct: 140 ----------------------------KAIISKFGENLDDVYGKICLVAQTT----EKQ 167
Query: 194 EIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSS 253
E + V +++K ++ ++FNTIC AT+ RQ ++ + D ++V+GG +SS
Sbjct: 168 ENWEKVLSILLKK------SKDIVTFNTICSATERRQKKAEELAKIS-DAMVVIGGHHSS 220
Query: 254 NTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGA 313
NT+ L EI + + E I N GE+ + E + K I IG+ +GA
Sbjct: 221 NTTKLYEICKS--------NCENTIHVENS-------GEIPD-ELYKGKDNIRIGVAAGA 264
Query: 314 STPDKAVEDVLKKV 327
STPD +++ + K+
Sbjct: 265 STPDWIIKEAMNKM 278
>gi|448747265|ref|ZP_21728926.1| LytB protein [Halomonas titanicae BH1]
gi|445565177|gb|ELY21289.1| LytB protein [Halomonas titanicae BH1]
Length = 334
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 139/313 (44%), Gaps = 64/313 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L A + VEE D V +V+ A G +
Sbjct: 50 IYVRHEVVHNRFVVETLR--ARGAVFVEE----LDEVPDDVIVIFSAHGVSRAVQADAER 103
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V ++ K I+ G H E T G+Y
Sbjct: 104 RGLKVFDATCPLVTKVHLEVLRYAKRGQECILIGHEGHPEVEGT---MGRY--------- 151
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSK--GFDPDVDLVKVGIANQTTMLKGETEE 194
D GG + +L + ++ V+K DP K+ QTT+ +T +
Sbjct: 152 ----DTSHGGRI---------YLVEDEEDVAKLEVNDPS----KLAFVTQTTLSMDDTAK 194
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
+ + G N + IC ATQ RQDA+ ++ + DL+LVVG NSSN
Sbjct: 195 VIDALRDKFAEIQGPRN--------DDICYATQNRQDAVRELAAQS-DLLLVVGSPNSSN 245
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
++ L+E++E G P+Y ID+ +I P WL + +G+T+GAS
Sbjct: 246 SNRLRELSERMGTPAYLIDNADQIDP-----------------KWL-ENVARVGVTAGAS 287
Query: 315 TPDKAVEDVLKKV 327
P+ V+ V+ K+
Sbjct: 288 APEVLVKGVIAKL 300
>gi|186472955|ref|YP_001860297.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
phymatum STM815]
gi|184195287|gb|ACC73251.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia phymatum
STM815]
Length = 314
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 132/309 (42%), Gaps = 66/309 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V L + + + ++ D V +G V + A G +
Sbjct: 33 VYVRHEIVHNRHVVDNLRQKGARFV------EELDEVPQGAVAIFSAHGVSQSVERDAEQ 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKE 135
+ + ++D TCP V+KV ++ G T I+ G H E T GK ++V++ E
Sbjct: 87 RGLDVLDATCPLVTKVHVQGRQYVAGGRTLILIGHAGHPEVEGTIGQIPGKVLLVQS--E 144
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
AE +L T A++ QTT+ +T I
Sbjct: 145 AEV-------AQLELPIDTPLAYV-----------------------TQTTLSVDDTRGI 174
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
+++ G + IC ATQ RQ A+ ++ +VD++LVVG NSSN+
Sbjct: 175 INALKRRFPDIVGPDT--------RDICYATQNRQAAVREL-SSQVDVLLVVGATNSSNS 225
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L+EI + G+PSY + I P W T+GIT+GAS
Sbjct: 226 NRLREIGSESGVPSYLVADGSEIKP-----------------EWF-ANVTTVGITAGASA 267
Query: 316 PDKAVEDVL 324
P++ VE+V+
Sbjct: 268 PEEMVENVI 276
>gi|54026769|ref|YP_121011.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nocardia
farcinica IFM 10152]
gi|71152191|sp|Q5YQ94.1|ISPH_NOCFA RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|54018277|dbj|BAD59647.1| putative isoprenoid biosynthesis protein [Nocardia farcinica IFM
10152]
Length = 336
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 136/319 (42%), Gaps = 75/319 (23%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ EI+HN V + L E V + V++ + V +G VVV A G +
Sbjct: 58 IYVRKEIVHNRHVVETLRERGV--VFVDDTAE----VPEGAVVVFSAHGVSPAVHEAAAA 111
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+N+ +D TCP V+KV ++ + DY ++ G HEE TA A +++ + + +A
Sbjct: 112 RNLHTIDATCPLVTKVHQEAKRFARDDYDILLIGHEGHEEVEGTAGEAPEHVQLVDGPDA 171
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
VD V+V N+ L T +
Sbjct: 172 -------------------------------------VDRVRVRDENKVIWLSQTTLSVD 194
Query: 197 KLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGGWN 251
+ +E V+ + E F S + IC ATQ RQ A+ M E DL++VVG N
Sbjct: 195 ETMET-------VQRLRERFPSLQDPPSDDICYATQNRQVAVKAMAPE-CDLVIVVGSRN 246
Query: 252 SSNTSHLQEIAEDRGI-PSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGIT 310
SSN+ L E+A + G ++ +D + + P WL +G TIGIT
Sbjct: 247 SSNSVRLVEVALNAGAKAAHLVDYAREVDPA-----------------WL-EGVRTIGIT 288
Query: 311 SGASTPDKAVEDVLKKVFE 329
SGAS P+ V VL + E
Sbjct: 289 SGASVPEILVRGVLDMLAE 307
>gi|237751299|ref|ZP_04581779.1| penicillin tolerance protein [Helicobacter bilis ATCC 43879]
gi|229372665|gb|EEO23056.1| penicillin tolerance protein [Helicobacter bilis ATCC 43879]
Length = 280
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 141/310 (45%), Gaps = 73/310 (23%)
Query: 23 IIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDV--VVLPAFGAAVEEMVTLNNKNVQ 80
+IHNP RLE +N V K Q D+ GD V++ G + + L K V
Sbjct: 38 LIHNPLEISRLE----KNFGV---KVQEDITKLGDSKSVIIRTHGITKQNLEILQTKGVS 90
Query: 81 IVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVC 140
I D TCP+V+K VEK Y +I G +H E + S++ K IV + E+
Sbjct: 91 ITDATCPFVTKPQQIVEKMSNDGYNIVIFGDSNHPEVRSVMSYSVKTPIVVSDLES---- 146
Query: 141 DYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVE 200
L++ KK P KV + +QTT + E+ ++V+
Sbjct: 147 ------------------LQQIKKI------PK----KVAVVSQTT---KQIEQFLQIVQ 175
Query: 201 KTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQE 260
+ + N E + FNTIC+AT E Q+A + + +K D++++VGG SSNT L
Sbjct: 176 ------YLISNAMEVRV-FNTICNATFENQEAT-RTLSQKADIMIIVGGKTSSNTKQLFY 227
Query: 261 IAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPD--- 317
IA++ SY ++ E I K+ W G+ GI++GASTP+
Sbjct: 228 IAQNHCKDSYLVEDENDI-----------------KQEWFV-GKKICGISAGASTPNWVI 269
Query: 318 KAVEDVLKKV 327
K VE+ +K +
Sbjct: 270 KNVENAIKSL 279
>gi|111225494|ref|YP_716288.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Frankia alni
ACN14a]
gi|111153026|emb|CAJ64773.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase, 4Fe-4S
protein [Frankia alni ACN14a]
Length = 344
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 133/310 (42%), Gaps = 67/310 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +I+HN V + LE A I V+E D V G VV A G A +
Sbjct: 57 VYVRKQIVHNLHVVRTLE--AKGAIFVDE----TDEVPPGATVVFSAHGVAPTVHEEASA 110
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYI-IVKNMKE 135
+ ++ +D TCP VSKV + + + DY ++ G HEE V T A I +V ++
Sbjct: 111 RQLRTIDATCPLVSKVHSEARRFAREDYDILLIGHEGHEEVVGTTGQAPDRIHLVDGPED 170
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
A V K DP+ V +QTT+ ET+
Sbjct: 171 AAKV----------------------------KVRDPE----HVAFLSQTTLSVDETQTT 198
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
K + + G + + IC ATQ RQ A+ K + VDL++VVG NSSN+
Sbjct: 199 VKALRERFPHLQGPPS--------DDICYATQNRQVAV-KEISSAVDLVIVVGSPNSSNS 249
Query: 256 SHLQEIAEDRGIP-SYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
L E+A D G P +Y +D + +WL G T+G+TSGAS
Sbjct: 250 VRLVEVALDAGAPAAYLVDDSTEV-----------------DASWL-DGVETVGVTSGAS 291
Query: 315 TPDKAVEDVL 324
P++ V V+
Sbjct: 292 VPEELVTGVM 301
>gi|421880971|ref|ZP_16312323.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
bizzozeronii CCUG 35545]
gi|375316724|emb|CCF80319.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
bizzozeronii CCUG 35545]
Length = 274
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 137/307 (44%), Gaps = 67/307 (21%)
Query: 23 IIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIV 82
+IHNP KRLE N+ V+E + V + V++ G ++ L KNV I+
Sbjct: 34 LIHNPKEIKRLERD--YNVRVQE---DVESVEANESVIIRTHGIPKHDLALLKEKNVHII 88
Query: 83 DTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDY 142
D TCP+V K VEK Y +I G +H E S++ +V
Sbjct: 89 DATCPYVIKPQQIVEKMSAQGYQIVIFGDANHPEVKGVISYSSTPPLV------------ 136
Query: 143 ILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKT 202
S E +K K ++ + +QTT ++ KL+E
Sbjct: 137 --------VGSLAELQTQKLGK-------------RIALVSQTT------KQTPKLLE-- 167
Query: 203 MMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIA 262
+ F + + E I FNTIC+AT + Q+A+ ++ +E VD++++VGG +SSNT L IA
Sbjct: 168 -IASFLIAHCAEVRI-FNTICNATFDNQEAVRELSQE-VDIMVIVGGKSSSNTKQLFNIA 224
Query: 263 EDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVED 322
++ SY ++ + P W G+ GI++GASTPD ++
Sbjct: 225 KEFCADSYLVEDFNDLDP-----------------TWF-VGKTLCGISAGASTPDWIIQG 266
Query: 323 VLKKVFE 329
V +K+ E
Sbjct: 267 VREKIEE 273
>gi|421717124|ref|ZP_16156431.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori R037c]
gi|407218969|gb|EKE88787.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
pylori R037c]
Length = 274
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 138/312 (44%), Gaps = 67/312 (21%)
Query: 19 ITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKN 78
I +IHN RL++ N+ +EE K+ + K V++ G +++ L NK
Sbjct: 30 IFGSLIHNAKEINRLKKNF--NVKIEEDPKK---IPKNKSVIIRTHGIPKQDLEYLKNKG 84
Query: 79 VQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEY 138
V+I D TCP+V K VE K Y ++ G +H E S+A +V
Sbjct: 85 VKITDATCPYVIKPQQIVESMSKEGYQIVLFGDINHPEVKGVISYATNQALV-------- 136
Query: 139 VCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKL 198
+N +E L++ KV + +QTT ++ KL
Sbjct: 137 ---------VNSLEELQEKKLQR----------------KVALVSQTT------KQTPKL 165
Query: 199 VEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHL 258
++ + + VE E + FNTIC+AT Q A + +E VD+++VVGG SSNT L
Sbjct: 166 LQ---IASYLVERCTEVRV-FNTICNATSYNQKAALDLSKE-VDIMIVVGGKTSSNTKQL 220
Query: 259 QEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 318
IA+ SY ++ E + EL W K + GIT+GASTPD
Sbjct: 221 LSIAKQHCKDSYLVEDENEL-------------ELA----WF-KDKKLCGITAGASTPDW 262
Query: 319 AVEDVLKKVFEI 330
+E+V +K+ I
Sbjct: 263 IIENVKQKISTI 274
>gi|406894557|gb|EKD39345.1| hypothetical protein ACD_75C00436G0001 [uncultured bacterium]
Length = 314
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 128/309 (41%), Gaps = 67/309 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V LE+ + + + +G V + A G ++
Sbjct: 37 VYVLHEIVHNKHVIAELEQAGAVFV------EHLRDIPQGGVCIFSAHGVSLTIEKKARE 90
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATAS-FAGKYIIVKNMKE 135
++ VD TCP V+ V VEK+ Y +I G + H E TA G+ IV + E
Sbjct: 91 LGLRTVDATCPLVTSVHGMVEKYHAMGYDVVIIGHHGHPEVEGTAGRVQGRVHIVADEAE 150
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
AE + D KV QTT+ K + I
Sbjct: 151 AETITV--------------------------------ADAGKVAYVTQTTLNKNDILGI 178
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
+++++ R G + IC ATQ RQDA+ K + DL+ VVG NSSN+
Sbjct: 179 LEILQRRFPRIKGPPS---------NICFATQNRQDAV-KQLAGISDLLFVVGSKNSSNS 228
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L+E+A G+ ++ ID I P A K IGIT+GAS
Sbjct: 229 NRLREVARQCGVEAHLIDDFHDIDPSALQAKK------------------RIGITAGASA 270
Query: 316 PDKAVEDVL 324
P++ V+ V+
Sbjct: 271 PERLVDGVI 279
>gi|322834470|ref|YP_004214497.1| hydroxymethylbutenyl pyrophosphate reductase [Rahnella sp. Y9602]
gi|384259693|ref|YP_005403627.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Rahnella
aquatilis HX2]
gi|321169671|gb|ADW75370.1| hydroxymethylbutenyl pyrophosphate reductase [Rahnella sp. Y9602]
gi|380755669|gb|AFE60060.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Rahnella
aquatilis HX2]
Length = 317
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 133/312 (42%), Gaps = 62/312 (19%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L + I +Q V G +++ A G +
Sbjct: 33 IYVRHEVVHNRYVVDSLRQRGAVFI------EQISEVPDGSILIFSAHGVSQAVRAEAKA 86
Query: 77 KNVQIV-DTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKE 135
+++ ++ D TCP V+KV V + + +I+ G H E T G+Y
Sbjct: 87 RDLTMLFDATCPLVTKVHMEVARASRKGTEAILIGHAGHPEVEGTM---GQY-------- 135
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
NG EA + +K V D + QTT+ +T +
Sbjct: 136 ----------SNPNGGMYLVEAPEDVYKLQVK-------DENNLCFMTQTTLSVDDTSAV 178
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
+ + G + IC AT RQ+A+ + + + D++LVVG NSSN+
Sbjct: 179 IDALRDRFPKIIGPRK--------DDICYATTNRQEAV-RTLADGADVVLVVGSKNSSNS 229
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L E+A+ G+PSY IDS I +ENWL + +IG+T+GAS
Sbjct: 230 NRLAELAQRVGVPSYLIDSAADI-----------------QENWLKDAK-SIGVTAGASA 271
Query: 316 PDKAVEDVLKKV 327
PD V+DV+ K+
Sbjct: 272 PDILVQDVISKL 283
>gi|400406449|ref|YP_006589197.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[secondary endosymbiont of Heteropsylla cubana]
gi|400364702|gb|AFP85769.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[secondary endosymbiont of Heteropsylla cubana]
Length = 316
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 143/322 (44%), Gaps = 61/322 (18%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V L + V I + + V +G V++ A G + NN
Sbjct: 33 IYVYHEIVHNRYVVNMLCQQGVIFI------ENINKVPEGSVLIFSAHGVSQSVRKEANN 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+N+ I D TCP V+KV V + + +I+ G H E T G+Y N+
Sbjct: 87 RNLTIFDATCPLVNKVHMEVIRASREGREAILIGHNGHPEVKGT---MGQY---NNLSAG 140
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
Y+ + S K+ + K K+ VD K+ QTT+ ++ I
Sbjct: 141 IYLVE-----------SEKDVWELKVKR---------VD--KLSFMLQTTLSLDDSAIIV 178
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+ G N IC AT+ RQ+A+ +++ K D++LVVG NSSN++
Sbjct: 179 DALRLRFPSIIGPRKEN--------ICYATRNRQEAV-RILAAKSDVVLVVGSKNSSNSN 229
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L E+ + G P+Y ID I + +W K + IG+T+GAS P
Sbjct: 230 RLTELVKRSGKPAYLIDRADDI-----------------QSSWFYKKE-NIGVTAGASAP 271
Query: 317 DKAVEDVLKKVFEIKREEALQL 338
D VE V+ ++ + +E ++L
Sbjct: 272 DILVEHVITRLRLLGAQEPIEL 293
>gi|378823749|ref|ZP_09846343.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Sutterella
parvirubra YIT 11816]
gi|378597437|gb|EHY30731.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Sutterella
parvirubra YIT 11816]
Length = 320
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 129/310 (41%), Gaps = 67/310 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGA--AVEEMVTL 74
I++ +EI+HN TV L + V G +V A G AVEE T
Sbjct: 33 IYVRHEIVHNRTVVDDLRARGAVFV------DDLAEVPDGATLVFSAHGVPRAVEEEAT- 85
Query: 75 NNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMK 134
+ ++ D TCP V+KV V ++ T I+ G H E T
Sbjct: 86 -RRGFRVFDATCPLVTKVHREVGNMREAGKTIIMIGHAGHPEVEGTMG------------ 132
Query: 135 EAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEE 194
V D I E + +T PD + QTT+ ++ E
Sbjct: 133 ---QVKDGIRLVETSADVATL----------------PDAAGETLAYVTQTTISADDSRE 173
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
++E R G+ H IC ATQ RQ+A+ K+ + +VD++LV+G SSN
Sbjct: 174 ---MIEALRARFPGI-----HEPKRQDICYATQNRQEAVKKLAQAEVDIVLVIGSATSSN 225
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
++ L+E+AE G +Y +DS + + P WL +G IGIT+GAS
Sbjct: 226 SNRLREVAEREGTRAYLVDSAEHMDPA-----------------WL-EGVSRIGITAGAS 267
Query: 315 TPDKAVEDVL 324
P+ V+ VL
Sbjct: 268 APESLVQGVL 277
>gi|241663906|ref|YP_002982266.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ralstonia
pickettii 12D]
gi|240865933|gb|ACS63594.1| hydroxymethylbutenyl pyrophosphate reductase [Ralstonia pickettii
12D]
Length = 327
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 135/311 (43%), Gaps = 64/311 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V L + ++ D V G V+ A G +
Sbjct: 52 IYVRHEIVHNAYVVGDLRNKGAVFV------QELDDVPVGGTVIFSAHGVSRAVREAAEA 105
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V K + + I+ G H E T A +++
Sbjct: 106 RGLRVFDATCPLVTKVHVEVSKMRAQGFEIIMIGHKGHPEVEGTMGQANDGMLL-----V 160
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
E V D L T+ A++ QTT+ ET+EI
Sbjct: 161 ESVDDV---AHLEVKDPTRLAYV-----------------------TQTTLSVDETQEI- 193
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
V R V H IC ATQ RQDA+ K + +V++++VVG NSSN++
Sbjct: 194 --VAAIKARFPAV-----HEPKKQDICYATQNRQDAV-KFMAPQVEVVIVVGSPNSSNSN 245
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L+E+AE G+P+Y +D+ +++ P W+ G+ +G+T+GAS P
Sbjct: 246 RLRELAEKLGVPAYMVDTPEQVKP-----------------EWV-AGKRRVGLTAGASAP 287
Query: 317 DKAVEDVLKKV 327
++ + ++ ++
Sbjct: 288 EELAQSIVDRL 298
>gi|386283599|ref|ZP_10060823.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Sulfurovum sp.
AR]
gi|385345142|gb|EIF51854.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Sulfurovum sp.
AR]
Length = 283
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 140/314 (44%), Gaps = 73/314 (23%)
Query: 23 IIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIV 82
+IHN RL+E NI + E + + + D VV+ G E+ L +++ +++
Sbjct: 34 LIHNKDEINRLKEGF--NIGLAE---RLEDIETNDAVVIRTHGIPKNELAVLKSQDHKVI 88
Query: 83 DTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDY 142
D TCP+V+ V+K Y+ +I G H E S+A
Sbjct: 89 DATCPYVTTPQNIVQKMSVEGYSIVIFGDKDHPEIKGVVSYA------------------ 130
Query: 143 ILGGELNGSSSTKEAFL----EKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKL 198
++AF+ E+ + KG KV + +QTT + E+ K+
Sbjct: 131 ---------EDPEDAFIVLEPEELESLPLKG--------KVAVVSQTTK---KPEDFAKI 170
Query: 199 VEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHL 258
V + + V FNTIC AT E QDA ++ + K D+++V+GG +SSNT L
Sbjct: 171 VTALLETRKEVR-------VFNTICTATFENQDAAAELAK-KADVMIVIGGKHSSNTKQL 222
Query: 259 QEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDK 318
I E SY I++E+ + + +W G+ GI++GASTPD
Sbjct: 223 HSICERHCKDSYLIENEQEL-----------------EASWF-DGKELCGISAGASTPDW 264
Query: 319 AVEDVLKKVFEIKR 332
V++V+ K+ E+K+
Sbjct: 265 IVQNVINKIQEMKK 278
>gi|416917395|ref|ZP_11932306.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
sp. TJI49]
gi|325527366|gb|EGD04723.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
sp. TJI49]
Length = 326
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 141/314 (44%), Gaps = 64/314 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V + L++ I VEE + V G+ V+ A G +
Sbjct: 48 IYVRHEIVHNKYVVEDLKKKGA--IFVEE----LEEVPAGNTVIFSAHGVSKSVRDEAGV 101
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ ++I D TCP V+KV V K ++ ++ G H E T + + M
Sbjct: 102 RGLRIYDATCPLVTKVHVEVAKMRQDGVDIVMIGHKGHPEVEGTMGQ-----VERGMHLV 156
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
E V D ++K + A DP+ ++ + QTT+ + EI
Sbjct: 157 ESVED-----------------VQKLELA-----DPE----RIALVTQTTLSVDDAAEI- 189
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
K + E IC ATQ RQDA+ K + + D+++VVG NSSN+S
Sbjct: 190 -----IAALKAKYPKIREP--KKQDICYATQNRQDAV-KFMAPQCDVVIVVGSPNSSNSS 241
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L+E+AE RG+ +Y +D+ ++I P W+ G+ IG+T+GAS P
Sbjct: 242 RLREVAEKRGVDAYMVDAPEQIDPA-----------------WV-AGKRRIGVTAGASAP 283
Query: 317 DKAVEDVLKKVFEI 330
+ + V+ ++ E+
Sbjct: 284 EVLAQAVIARLREL 297
>gi|311104977|ref|YP_003977830.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Achromobacter
xylosoxidans A8]
gi|310759666|gb|ADP15115.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Achromobacter
xylosoxidans A8]
Length = 325
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 137/321 (42%), Gaps = 78/321 (24%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V + L I + D G +VV A G + ++
Sbjct: 42 IYVRHEIVHNRYVVEDLRAKGAIFI------DELDDAPAGAIVVFSAHGVSKAVRAEADS 95
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA--GKYIIVKNMK 134
+ +++ D TCP V+KV V + + I+ G H E T A G Y++
Sbjct: 96 RGLRVFDATCPLVTKVHIEVARMRAAGREIIMIGHKGHPEVEGTLGQAQGGMYLV----- 150
Query: 135 EAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEE 194
E V D + G ++ DP+ + QTT+ +
Sbjct: 151 --ETVED-VAGLQVA---------------------DPE----NLAYVTQTTLSVDDAAA 182
Query: 195 IGKLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGG 249
+ + ++ E F S + IC ATQ RQDA+ K++ DL+LVVG
Sbjct: 183 VSRALK-------------ERFPSIVEPKKSDICYATQNRQDAV-KVMAPDCDLVLVVGS 228
Query: 250 WNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGI 309
NSSN++ L+E+AE +G+ SY ID + I P WL + IG+
Sbjct: 229 PNSSNSNRLREVAERKGVASYLIDGAQSIDPA-----------------WLVDRK-RIGV 270
Query: 310 TSGASTPDKAVEDVLKKVFEI 330
T+GAS P+ V+ V+ +V E+
Sbjct: 271 TAGASAPEILVQQVIDRVKEL 291
>gi|336453533|ref|YP_004607999.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
bizzozeronii CIII-1]
gi|335333560|emb|CCB80287.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
bizzozeronii CIII-1]
Length = 274
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 137/307 (44%), Gaps = 67/307 (21%)
Query: 23 IIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIV 82
+IHNP KRLE N+ V+E + V + V++ G ++ L KNV I+
Sbjct: 34 LIHNPKEIKRLERDF--NVRVQE---DVESVEANESVIIRTHGIPKHDLALLKEKNVHII 88
Query: 83 DTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDY 142
D TCP+V K VEK Y +I G +H E S++ +V
Sbjct: 89 DATCPYVIKPQQIVEKMSAQGYQIVIFGDANHPEVKGVISYSSTPPLV------------ 136
Query: 143 ILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKT 202
S E +K K ++ + +QTT ++ KL+E
Sbjct: 137 --------VGSLAELQTQKLGK-------------RIALVSQTT------KQTPKLLE-- 167
Query: 203 MMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIA 262
+ F + + E I FNTIC+AT + Q+A+ ++ +E VD++++VGG +SSNT L IA
Sbjct: 168 -IASFLIAHCAEVRI-FNTICNATFDNQEAVRELSQE-VDIMVIVGGKSSSNTKQLFNIA 224
Query: 263 EDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVED 322
++ SY ++ + P W G+ GI++GASTPD ++
Sbjct: 225 KEFCADSYLVEDFNDLDP-----------------TWF-VGKTLCGISAGASTPDWIIQG 266
Query: 323 VLKKVFE 329
V +K+ E
Sbjct: 267 VREKIEE 273
>gi|392946322|ref|ZP_10311964.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase [Frankia
sp. QA3]
gi|392289616|gb|EIV95640.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase [Frankia
sp. QA3]
Length = 321
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 136/310 (43%), Gaps = 67/310 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +I+HN V + LE A I V+E D V +G VV A G A ++
Sbjct: 34 VYVRKQIVHNLHVVRTLE--AKGAIFVDE----TDEVPQGATVVFSAHGVAPTVHEEASS 87
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYI-IVKNMKE 135
+ ++ +D TCP VSKV + + + DY ++ G HEE V T A I +V ++
Sbjct: 88 RQLRTIDATCPLVSKVHSEARRFAREDYDILLIGHEGHEEVVGTTGQAPDRIHLVDGPED 147
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
A V K DP+ V +QTT+ ET+
Sbjct: 148 AAKV----------------------------KVRDPE----HVAFLSQTTLSVDETQTT 175
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
K + + G + + IC ATQ RQ A+ K + VDL++VVG NSSN+
Sbjct: 176 VKALRERFPHLQGPPS--------DDICYATQNRQVAV-KEISSAVDLVIVVGSPNSSNS 226
Query: 256 SHLQEIAEDRGIP-SYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
L E+A D G P ++ +D + +WL +G T+G+TSGAS
Sbjct: 227 VRLVEVALDAGAPAAHLVDDSTEV-----------------DASWL-EGVETVGVTSGAS 268
Query: 315 TPDKAVEDVL 324
P++ V V+
Sbjct: 269 VPEELVTGVM 278
>gi|83590176|ref|YP_430185.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Moorella
thermoacetica ATCC 39073]
gi|83573090|gb|ABC19642.1| hydroxymethylbutenyl pyrophosphate reductase [Moorella
thermoacetica ATCC 39073]
Length = 736
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 125/302 (41%), Gaps = 69/302 (22%)
Query: 23 IIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIV 82
+IHN V +L V+ + D VN G +++ + G E +V +K ++I+
Sbjct: 35 LIHNRQVVDQLAREGVRPV------ASLDEVNCGRILIR-SHGTTPETLVRARDKGLEII 87
Query: 83 DTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDY 142
D TCP+V + +K Y II G +H E +AG +V K+A
Sbjct: 88 DATCPYVKRAQHLAQKMAAEGYQVIIVGDAAHPEVQGMLGWAGPGAVVVPDKKA------ 141
Query: 143 ILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKT 202
A + F P + + QTT + EE+ +
Sbjct: 142 ----------------------AAALPFHP-----RRAVLAQTTQPESRLEEVAAALRSN 174
Query: 203 MMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIA 262
+ + NT+C AT +RQ+A ++ + VD+++VVGG S+NT HL E+
Sbjct: 175 ----------TDTLVVHNTVCQATHQRQEAAVRLARQ-VDVMVVVGGKESANTRHLAELC 223
Query: 263 EDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVED 322
G P+Y ++ GEL + W + +G+T GASTP +E+
Sbjct: 224 RATGTPTYHVERA---------------GELCRQ--WFINTR-RVGVTGGASTPAWIIEE 265
Query: 323 VL 324
V+
Sbjct: 266 VV 267
>gi|254251635|ref|ZP_04944953.1| peptidyl-prolyl cis-trans isomerase [Burkholderia dolosa AUO158]
gi|124894244|gb|EAY68124.1| peptidyl-prolyl cis-trans isomerase [Burkholderia dolosa AUO158]
Length = 500
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 143/316 (45%), Gaps = 68/316 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGA--AVEEMVTL 74
I++ +EI+HN V + L++ I VEE + V G+ V+ A G AV + +
Sbjct: 223 IYVRHEIVHNKYVVEDLKKKGA--IFVEE----LEEVPSGNTVIFSAHGVSKAVRDEAAV 276
Query: 75 NNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMK 134
+ ++I D TCP V+KV V K ++ ++ G H E T + + M
Sbjct: 277 --RGLRIYDATCPLVTKVHVEVAKMRQDGVDIVMIGHKGHPEVEGTMGQ-----VERGMH 329
Query: 135 EAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEE 194
E V D ++K + A DP+ ++ + QTT+ + E
Sbjct: 330 LVESVED-----------------VQKLELA-----DPE----RIALVTQTTLSVDDAAE 363
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
I K + E IC ATQ RQDA+ K + + D+++VVG NSSN
Sbjct: 364 I------IAALKAKYPKIREP--KKQDICYATQNRQDAV-KFMAPQCDVVIVVGSPNSSN 414
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
+S L+E+AE RG+ +Y +D+ +I P W+ G+ IG+T+GAS
Sbjct: 415 SSRLREVAEKRGVAAYMVDAPDQIDPA-----------------WV-AGKRRIGVTAGAS 456
Query: 315 TPDKAVEDVLKKVFEI 330
P+ + V+ ++ E+
Sbjct: 457 APEVLAQAVIARLREL 472
>gi|410693886|ref|YP_003624507.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Thiomonas sp.
3As]
gi|294340310|emb|CAZ88691.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Thiomonas sp.
3As]
Length = 328
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 132/311 (42%), Gaps = 65/311 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V L+ A + VEE + V KG VV A G +
Sbjct: 51 IYVRHEIVHNTYVVNDLK--AKGAVFVEE----LEQVPKGGTVVFSAHGVSQAVRAQAQT 104
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+Q+ D TCP V+KV V K ++ ++ G H E T A +V+ + +
Sbjct: 105 LGLQVFDATCPLVTKVHVEVAKMRRDGLEIVMIGHAGHPEVEGTMGQAEGIHLVQTLDDV 164
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
LN + AF+ QTT+ + EI
Sbjct: 165 ---------ARLNIAPDAPLAFV-----------------------TQTTLSVDDASEI- 191
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
V R V H IC ATQ RQDA+ KM+ +VD+++VVG SSN++
Sbjct: 192 --VAALRARYPQV-----HEPKKQDICYATQNRQDAV-KMLAPQVDVVIVVGSPTSSNSN 243
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L+E+A+ G P+Y +D + + + WL +G IG+T+GAS P
Sbjct: 244 RLREVAQRMGKPAYMVDQVEDL-----------------RAEWL-EGARQIGLTAGASAP 285
Query: 317 DKAVEDVLKKV 327
+ V+ V+ ++
Sbjct: 286 EALVDQVVARL 296
>gi|445498856|ref|ZP_21465711.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase IspH
[Janthinobacterium sp. HH01]
gi|444788851|gb|ELX10399.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase IspH
[Janthinobacterium sp. HH01]
Length = 320
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 142/319 (44%), Gaps = 74/319 (23%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V + L I + D V G+ +V A G + +
Sbjct: 36 IYVRHEIVHNAYVVEDLRNKGAIFI------EDLDDVPAGNTLVFSAHGVSKAVRAEAES 89
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ + I D TCP V+KV V K +K I+ G H E T + +E
Sbjct: 90 RGLSIFDATCPLVTKVHVEVAKMRKQGCEIIMIGHDGHPEVEGT---------MGQTEEG 140
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
Y+ + + +++ S TK PD ++ +QTT+ +T +I
Sbjct: 141 MYLVETV--ADVDKLSVTK----------------PD----QLAYVSQTTLSVDDTADI- 177
Query: 197 KLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGGWN 251
+E + + + IC AT RQ+A+ K + +V++++VVG N
Sbjct: 178 ------------IEALKRKYPAIIEPKKGDICYATTNRQEAV-KFMAPQVEVVIVVGSPN 224
Query: 252 SSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITS 311
SSN++ L+E+AE +G P+Y +D+ +I P WL +G++ IG+T+
Sbjct: 225 SSNSNRLREVAEKKGTPAYMVDNATQIDP-----------------LWL-EGKLRIGVTA 266
Query: 312 GASTPDKAVEDVLKKVFEI 330
GAS P+ V V+ ++ E+
Sbjct: 267 GASAPEVLVHAVIDRLKEL 285
>gi|344206529|ref|YP_004791670.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Stenotrophomonas maltophilia JV3]
gi|343777891|gb|AEM50444.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Stenotrophomonas maltophilia JV3]
Length = 316
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 135/316 (42%), Gaps = 63/316 (19%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L++ I VEE D V + V+ A G +
Sbjct: 33 IYVRHEVVHNRFVVDDLKQRGA--IFVEE----LDEVPDNNTVIFSAHGVSQAVRQEAER 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V +H + ++ G H E T
Sbjct: 87 RGLKVFDATCPLVTKVHFEVARHCRAGRDVVLIGHAGHPEVEGTM--------------- 131
Query: 137 EYVCDYILGGELNGSSSTKEAFL-EKFKKAVSKGFD-PDVDLVKVGIANQTTMLKGETEE 194
G+ N + T + +L E ++ + + P+ QTT+ +T
Sbjct: 132 ---------GQWNREAGTGQIYLVEDVEQVATLHINQPE----NFAYTTQTTLSVDDTRG 178
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
I + + G +N + IC ATQ RQDA+ + + + DL+LVVG NSSN
Sbjct: 179 IIDALRERFPAMQGPKN--------DDICYATQNRQDAVRDLAK-RCDLVLVVGSPNSSN 229
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
++ L E+A G+ SY ID I P W+ +G+ IG+T+GAS
Sbjct: 230 SNRLSELARREGVESYLIDGAHEIDP-----------------RWV-EGKQHIGVTAGAS 271
Query: 315 TPDKAVEDVLKKVFEI 330
P V+ VL ++ E+
Sbjct: 272 APQVLVDGVLARLAEL 287
>gi|153834655|ref|ZP_01987322.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio harveyi
HY01]
gi|148868907|gb|EDL67965.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio harveyi
HY01]
Length = 321
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 148/320 (46%), Gaps = 59/320 (18%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L++ I VEE V ++V+ A G + +
Sbjct: 37 IYVRHEVVHNRFVVEGLKQRGA--IFVEE----LHEVPDNNIVIFSAHGVSQAVRQEAKS 90
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++ + D TCP V+KV V + + + ++ G H E T G+Y +
Sbjct: 91 RDLTVFDATCPLVTKVHMEVARASRRNMEVVLIGHAGHPEVEGTM---GQY-------SS 140
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
E Y++ A +EK K V DP DL V +QTT+ ET ++
Sbjct: 141 ETGGMYLV---------ETPADVEKLKSIVK---DPS-DLHYV---SQTTLSVDETADVI 184
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+ + + G + IC ATQ RQDA+ ++ + VD+++VVG NSSN++
Sbjct: 185 EELRRVFPDIQGPRK--------DDICYATQNRQDAVRELSAD-VDVMVVVGSKNSSNST 235
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L+E+AE G P Y D + I P W +G++ +G+T+GAS P
Sbjct: 236 RLKELAEKLGTPGYLTDCPEDIKP-----------------EWF-EGKVKVGVTAGASAP 277
Query: 317 DKAVEDVLKKVFEIKREEAL 336
++ V +L ++ E+ EA+
Sbjct: 278 EELVNQILDRIKELVGAEAV 297
>gi|418054740|ref|ZP_12692796.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Hyphomicrobium
denitrificans 1NES1]
gi|353212365|gb|EHB77765.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Hyphomicrobium
denitrificans 1NES1]
Length = 309
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 139/327 (42%), Gaps = 68/327 (20%)
Query: 14 EEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVT 73
E +++ +EI+HN V L+ + + + D + V + A G + +
Sbjct: 30 EGPVYVRHEIVHNRHVVDSLKAKGAKFV------EDLDEIPSDAVAIFSAHGVSRDVEDG 83
Query: 74 LNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-ASFAGKYIIVKN 132
+N+ ++D TCP V+KV +++ T I+ G H E T G +V+N
Sbjct: 84 AAKRNLNVIDATCPLVTKVHNQGQRYSSLGRTVILIGHAGHAEVEGTLGRITGPVYLVEN 143
Query: 133 MKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGET 192
++ LN T A++ QTT+ +T
Sbjct: 144 REDVL---------NLNIPDDTPIAYI-----------------------TQTTLSVDDT 171
Query: 193 EEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNS 252
+ + V+ G E + IC ATQ RQ A+ + V+++LVVG NS
Sbjct: 172 RQTIEAVKARFSDVIGPETRD--------ICYATQNRQTAVRNLCGH-VEVLLVVGSANS 222
Query: 253 SNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSG 312
SN++ L+EI E+ G+PSY + +I P WL G+ TIGIT+G
Sbjct: 223 SNSNRLREIGEECGVPSYLVADGGQIDP-----------------RWL-AGKETIGITAG 264
Query: 313 ASTPDKAVEDVLKKVFEIKREE--ALQ 337
AS P+ V+DV+ + ++ E ALQ
Sbjct: 265 ASAPEVLVDDVIGALAKLGSVEIKALQ 291
>gi|451976211|ref|ZP_21927377.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio
alginolyticus E0666]
gi|451929827|gb|EMD77555.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio
alginolyticus E0666]
Length = 321
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 145/324 (44%), Gaps = 67/324 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L++ + VEE V ++V+ A G +
Sbjct: 37 IYVRHEVVHNRFVVEGLKQRGA--VFVEE----LHEVPDNNIVIFSAHGVSQAVRQEAKQ 90
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT----ASFAGKYIIVKN 132
+++ + D TCP V+KV V + + + ++ G H E T AS G +V+
Sbjct: 91 RDLTVFDATCPLVTKVHMEVARASRRNMEVVLIGHAGHPEVEGTMGQYASETGGMYLVET 150
Query: 133 MKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGET 192
A +EK K V DP DL V +QTT+ ET
Sbjct: 151 -----------------------PADVEKLKSIVK---DPS-DLHYV---SQTTLSVDET 180
Query: 193 EEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNS 252
++ + + + G + IC ATQ RQDA+ ++ E VD+++VVG NS
Sbjct: 181 ADVIEELRRVFPDIQGPRK--------DDICYATQNRQDAVRELAGE-VDVMVVVGSKNS 231
Query: 253 SNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSG 312
SN++ L+E+AE G P Y D + I P W +G+ +G+T+G
Sbjct: 232 SNSTRLKELAEKLGTPGYLTDCPEDIKP-----------------EWF-EGKTKVGVTAG 273
Query: 313 ASTPDKAVEDVLKKVFEIKREEAL 336
AS P++ V +L+++ E+ EA+
Sbjct: 274 ASAPEELVNQILERIKELVGAEAV 297
>gi|419956702|ref|ZP_14472769.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Enterobacter
cloacae subsp. cloacae GS1]
gi|388608459|gb|EIM37662.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Enterobacter
cloacae subsp. cloacae GS1]
Length = 316
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 139/322 (43%), Gaps = 61/322 (18%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L E I +Q V G +++ A G + N
Sbjct: 33 IYVRHEVVHNRYVVDSLRERGAIFI------EQISEVPDGAILIFSAHGVSQAVRNEAKN 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++ + D TCP V+KV V + + SI+ G H E T G+Y N +
Sbjct: 87 RDLTVFDATCPLVTKVHMEVARASRRGEESILIGHAGHPEVEGT---MGQY---SNPEGG 140
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
Y+ + S ++ F K F QTT+ +T ++
Sbjct: 141 MYLVE-----------SPEDVFTLNVKNEARLSF-----------MTQTTLSVDDTSDVI 178
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+ + + G + IC AT RQ+A+ + + E+ D++LVVG NSSN++
Sbjct: 179 DALRQRFPKIVGPRK--------DDICYATTNRQEAV-RALAEQADVVLVVGSKNSSNSN 229
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L E+A+ G ++ ID I +E W+ K + +G+T+GAS P
Sbjct: 230 RLAELAQRMGKAAFLIDDATDI-----------------QEAWV-KNAVCVGVTAGASAP 271
Query: 317 DKAVEDVLKKVFEIKREEALQL 338
D V++V+ ++ E+ EA+ L
Sbjct: 272 DILVQNVIARLQELGGGEAVPL 293
>gi|50955263|ref|YP_062551.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Leifsonia xyli
subsp. xyli str. CTCB07]
gi|71152187|sp|Q6ADV0.1|ISPH_LEIXX RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|50951745|gb|AAT89446.1| penicillin-tolerance protein [Leifsonia xyli subsp. xyli str.
CTCB07]
Length = 337
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 141/323 (43%), Gaps = 63/323 (19%)
Query: 2 AFIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVL 61
A IA E + +++ +I+HN V LE I V+E D V +G +V
Sbjct: 31 AVIAVEKALERYGAPVYVRKQIVHNIHVVSELERQGA--IFVDE----VDEVPEGAHIVF 84
Query: 62 PAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATA 121
A G + + ++ ++ +D TCP V+KV + + D+ ++ G HEE TA
Sbjct: 85 SAHGVSPAVVAAAADRGLRAIDATCPLVTKVHREAVRFARDDFEILLIGHEGHEEVEGTA 144
Query: 122 SFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGI 181
A + + + N S EA + K DPD +V
Sbjct: 145 GHAPERVTLVN--------------------SPDEADTIEVK-------DPD----RVVW 173
Query: 182 ANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKV 241
+QTT+ ET E +R+ N + IC ATQ RQ A+ K V +
Sbjct: 174 LSQTTLSVDETME--------TVRRLRERFPNLQNPPSDDICYATQNRQVAI-KKVAQSA 224
Query: 242 DLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLP 301
DL++VVG NSSN+ L E+A + G K AY++ + + +E WL
Sbjct: 225 DLVIVVGSANSSNSVRLVEVA---------------LEYGAKAAYRVDYASEIRQE-WL- 267
Query: 302 KGQITIGITSGASTPDKAVEDVL 324
G T+G+TSGAS P+ V++VL
Sbjct: 268 DGVATVGVTSGASVPEVLVQEVL 290
>gi|158929983|gb|ABW82964.1| hydroxymethylbutenyl pyrophosphate reductase [uncultured bacterium
pEAF66]
Length = 315
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 145/327 (44%), Gaps = 65/327 (19%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
I A KQF I++ +EI+HN V + L I + D V G+ +V A
Sbjct: 23 IVERALKQF-GAPIYVRHEIVHNAYVVEDLRSKGAIFI------EDLDDVPAGNTLVFSA 75
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
G + ++ + I D TCP V+KV V K +K I+ G H E T
Sbjct: 76 HGVSKAVRAEAASRGLTIFDATCPLVTKVHVEVAKMRKQGCEIIMIGHDGHPEVEGT--- 132
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
+ E Y+ + + E + S + +PD + +
Sbjct: 133 ------MGQTDEGMYLVETV---EDVAALSVR---------------NPD----NLAYVS 164
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTT+ +T +I + + K NV E IC AT RQ+A+ K + +V++
Sbjct: 165 QTTLSVDDTADIIQAI------KGRYPNVIEP--KKGDICYATTNRQEAV-KFMAPQVEV 215
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++VVG NSSN++ L+E+AE +G P+Y +D+ +I P WL G
Sbjct: 216 VIVVGSPNSSNSNRLREVAEKKGTPAYMVDNASQIDP-----------------QWL-VG 257
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEI 330
++ IG+T+GAS P+ V+ V+ ++ E+
Sbjct: 258 KLRIGVTAGASAPEVLVQAVIDRLKEL 284
>gi|312881899|ref|ZP_07741662.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio
caribbenthicus ATCC BAA-2122]
gi|309370417|gb|EFP97906.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio
caribbenthicus ATCC BAA-2122]
Length = 317
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 139/314 (44%), Gaps = 59/314 (18%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L++ I VEE + V ++V+ A G + +
Sbjct: 33 IYVRHEVVHNRFVVEGLKQRGA--IFVEELCE----VPDDNIVIFSAHGVSQAVRQEAKS 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ + + D TCP V+KV V + + + I+ G H E T
Sbjct: 87 RALTVFDATCPLVTKVHMEVARASRRNMEVILIGHAGHPEVEGTM--------------G 132
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
+Y + GG + + A L KA S DL V +QTT+ ET E+
Sbjct: 133 QYASE--TGGMYLVETPSDVAKLTSIVKAPS-------DLHYV---SQTTLSVDETAEVI 180
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+ + + G + IC ATQ RQDA+ M EE VD+++VVG NSSN++
Sbjct: 181 EELRRVFPDIQGPRK--------DDICYATQNRQDAVRDMAEE-VDIVIVVGSKNSSNST 231
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L+E+AE G P Y D+ I P W + ++ +G+T+GAS P
Sbjct: 232 RLKELAEKLGTPGYLTDTPDDIDP-----------------EWFAQ-KVRVGVTAGASAP 273
Query: 317 DKAVEDVLKKVFEI 330
++ V ++ KV I
Sbjct: 274 EELVNQIIDKVQSI 287
>gi|440731883|ref|ZP_20911859.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Xanthomonas
translucens DAR61454]
gi|440370499|gb|ELQ07397.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Xanthomonas
translucens DAR61454]
Length = 316
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 139/329 (42%), Gaps = 71/329 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L++ I VEE D V G+ V+ A G +
Sbjct: 33 IYVRHEVVHNRFVVDDLKQRGA--IFVEE----LDEVPDGNTVIFSAHGVSQAVRQEAER 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATAS------FAGKYIIV 130
+ +++ D TCP V+KV V +H + ++ G H E T AG+ +V
Sbjct: 87 RGLKVFDATCPLVTKVHFEVARHCRAGRDVVLIGHAGHPEVEGTMGQWNRERGAGRIYLV 146
Query: 131 KNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKG 190
+++++ A L+ + PD + QTT+
Sbjct: 147 EDIEQV--------------------ATLDIQQ--------PD----NLAYTTQTTLSVD 174
Query: 191 ETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGW 250
+T I + G +N + IC ATQ RQDA+ + + DL+LVVG
Sbjct: 175 DTRGIIDALRARYPALQGPKN--------DDICYATQNRQDAVRDLARQ-CDLVLVVGSP 225
Query: 251 NSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGIT 310
NSSN++ L E+A G+ SY ID I P W+ G+ IG+T
Sbjct: 226 NSSNSNRLSELARRDGVESYLIDGADEIDPA-----------------WI-AGKRRIGLT 267
Query: 311 SGASTPDKAVEDVLKKVFEIKREEALQLA 339
+GAS P V+ V+ ++ E+ + +LA
Sbjct: 268 AGASAPQVLVDGVIARLRELGADGVGELA 296
>gi|320354674|ref|YP_004196013.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Desulfobulbus
propionicus DSM 2032]
gi|320123176|gb|ADW18722.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Desulfobulbus
propionicus DSM 2032]
Length = 306
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 136/312 (43%), Gaps = 72/312 (23%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQN-IPVEEGKKQFDVVNKGDVVVLPAFGA--AVEEMVT 73
+++ +EI+HN V LEE+ + + VEE + + +G V V A G AVE+ T
Sbjct: 33 VYVLHEIVHNTHV---LEELRCRGAVFVEE----LEDIPRGSVTVFSAHGVSRAVEQRAT 85
Query: 74 LNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA-GKYIIVKN 132
++I+D TCP VSKV + + Y ++ G H E T A G +V
Sbjct: 86 --ALGLRIIDATCPLVSKVHRRMIRLNAQGYDVLVIGHKGHPEVEGTCGQAVGPVHVVSK 143
Query: 133 MKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGET 192
E G+L + DPD KVG QTT+ +T
Sbjct: 144 ASEI---------GQLQVT-------------------DPD----KVGYVTQTTLSVDDT 171
Query: 193 EEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNS 252
EI + + R + + IC AT RQ A+ ++ + +VDL+LVVG NS
Sbjct: 172 REILLAIRRRFPRIAEPDRTD--------ICYATTNRQAAVRELAD-RVDLVLVVGSKNS 222
Query: 253 SNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSG 312
SN++ L+E+AE R P++ ID I P W G +G+++G
Sbjct: 223 SNSNRLREVAELRQTPAHLIDDASEIDPA-----------------WF-AGVKRVGVSAG 264
Query: 313 ASTPDKAVEDVL 324
AS P+ V V+
Sbjct: 265 ASAPEHLVVGVV 276
>gi|187478893|ref|YP_786917.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Bordetella
avium 197N]
gi|115423479|emb|CAJ50013.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (putative drug
tolerance protein) [Bordetella avium 197N]
Length = 328
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 135/317 (42%), Gaps = 70/317 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V + L I + D G +VV A G +
Sbjct: 45 IYVRHEIVHNRYVVEDLRAKGAIFI------DELDQAPTGSIVVFSAHGVSKAVRAEAEA 98
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA--GKYIIVKNMK 134
+ +++ D TCP V+KV V + + I+ G H E T A G Y++
Sbjct: 99 RGLRVFDATCPLVTKVHIEVARMRAAGREIIMIGHKGHPEVEGTLGQAQSGMYLV----- 153
Query: 135 EAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEE 194
E V D + G T DPD + QTT+ + +
Sbjct: 154 --ETVAD------VEGLIVT----------------DPD----NLAFVTQTTL----SVD 181
Query: 195 IGKLVEKTMMRKF-GVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSS 253
V + + +F G+ + + IC ATQ RQDA+ K++ + DL+LVVG NSS
Sbjct: 182 DAAAVSRALKARFPGIVEPKK-----SDICYATQNRQDAV-KVLAPECDLVLVVGSPNSS 235
Query: 254 NTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGA 313
N++ L+E+AE G+ +Y +D I P WL + + IGIT+GA
Sbjct: 236 NSNRLREVAERIGVEAYLVDGASSIDPA-----------------WL-RERRRIGITAGA 277
Query: 314 STPDKAVEDVLKKVFEI 330
S P+ V V+ +V E+
Sbjct: 278 SAPEVLVNQVIDRVKEL 294
>gi|34558835|gb|AAQ75179.1| hydroxymethylbutenyl pyrophosphate reductase [Alvinella pompejana
epibiont 7G3]
Length = 277
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 127/287 (44%), Gaps = 68/287 (23%)
Query: 49 QFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSII 108
+ D + + D VV+ G E+ L + +I++ TCP+V+K VEK + DY+ II
Sbjct: 55 KLDDIKEKDTVVIRTHGIPKNELKILKQQKNKIINATCPYVTKPQQIVEKMSQEDYSIII 114
Query: 109 HGKYSHEETVATASFA----GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKK 164
G +H E S+A +II++ KE E K
Sbjct: 115 FGDKNHPEIKGVVSYAKDRDNAFIILR-----------------------KEELEELPLK 151
Query: 165 AVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICD 224
+ KV + QTT + EI V +++ V FNTIC+
Sbjct: 152 S------------KVAVVAQTTRKPADFLEI---VNSLILKHKEVR-------VFNTICN 189
Query: 225 ATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKI 284
AT E QDA + + + D+++V+GG +SSNT L I + SY I++EK +
Sbjct: 190 ATFENQDAAEDLAK-RADIMIVIGGKHSSNTKQLHSITKKWCPDSYLIENEKEL------ 242
Query: 285 AYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIK 331
K W + ++ GI++GASTPD V+DV+K + IK
Sbjct: 243 -----------KNEWFREKKLC-GISAGASTPDWIVQDVIKHIKAIK 277
>gi|291550295|emb|CBL26557.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and
DMAPP forming) [Ruminococcus torques L2-14]
Length = 284
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 143/313 (45%), Gaps = 68/313 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I+ IIHN V K LE+ V + EE + D + +G V++ + G A + L +
Sbjct: 34 IYTYGPIIHNEEVVKDLEQKGVIVLRSEE---ELDTLERG-TVIIRSHGVAKDVYDRLES 89
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYI-IVKNMKE 135
K +QIVD TCP+V K+ V+KH + II G H E +AG ++ + + +E
Sbjct: 90 KKIQIVDATCPFVKKIHNIVQKHSEMGENIIIIGNPEHPEVQGIKGWAGDHVEVFQTKEE 149
Query: 136 AE-YVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEE 194
AE Y C E+ K K+ I QTT + +E
Sbjct: 150 AENYSC-------------------EQGK--------------KICIVAQTTFNYNKFKE 176
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
+ +++EK + + V NTIC+AT+ERQ + + E VD ++V+G +SSN
Sbjct: 177 LVEILEK---KSYDVS-------VLNTICNATKERQTEA-QSIAETVDAMIVIGDKHSSN 225
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
T L EI +Y+I + G+L N L + T+GIT+GAS
Sbjct: 226 TQKLFEICRKACNNTYYIQT---------------LGDL--DLNQLGSVE-TVGITAGAS 267
Query: 315 TPDKAVEDVLKKV 327
TP+ +E+V V
Sbjct: 268 TPNNIIEEVQNNV 280
>gi|340360866|ref|ZP_08683330.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Actinomyces sp.
oral taxon 448 str. F0400]
gi|339882895|gb|EGQ72784.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Actinomyces sp.
oral taxon 448 str. F0400]
Length = 351
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 142/320 (44%), Gaps = 67/320 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ EI+HN V + L + + D V +G VV A G +
Sbjct: 53 IYVRKEIVHNKYVVEALSRRGAIFV------SKTDEVPEGARVVFSAHGVSPAVHARAEA 106
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
++++ +D TCP V+KV + K DY I+ G HEE T A + I V
Sbjct: 107 RHLRTIDATCPLVTKVHKQAIRFAKDDYDIILVGHTGHEEVEGTQGEAPERIQV------ 160
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
+NG + DP+ KV +QTT+ ET E
Sbjct: 161 -----------VNGPHEVDAVTVR----------DPE----KVVWISQTTLSVDETMETV 195
Query: 197 KLVEKTMMRKFGVENVNEHFI--SFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
+L+ + +F H + IC ATQ RQ A+ K + +VD+++VVG NSSN
Sbjct: 196 RLLRE----RF------PHLADPPADDICYATQNRQGAV-KTIAPRVDVMVVVGSGNSSN 244
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
+ L+E+A + G P +AY++ + +E E+W G T+G+TSGAS
Sbjct: 245 SVRLKEVALEAGAP---------------VAYRVDYARELE-ESWF-AGANTVGLTSGAS 287
Query: 315 TPDKAVEDVLKKVFEIKREE 334
P+ V +V++++ E+ +E
Sbjct: 288 VPEILVREVVERLGEMGFDE 307
>gi|261212206|ref|ZP_05926492.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio sp.
RC341]
gi|260838814|gb|EEX65465.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio sp.
RC341]
Length = 316
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 140/314 (44%), Gaps = 59/314 (18%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L++ + + ++ + V ++V+ A G +
Sbjct: 33 IYVRHEVVHNRFVVEGLKQRGARFV------EELNEVPDNNIVIFSAHGVSQAVRQEAKE 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++ + D TCP V+KV V + + ++ G H E T G+Y
Sbjct: 87 RSLTVFDATCPLVTKVHMEVARASRKHMEVVLIGHAGHPEVEGTM---GQY--------- 134
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
+S T +L + + V K + D + +QTT+ ET ++
Sbjct: 135 --------------ASDTGGMYLVEKPEDVVKLQNKVKDPSHLHYVSQTTLSVDETADVI 180
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+ + + G + IC ATQ RQDA+ +++ E+VD+++VVG NSSN++
Sbjct: 181 DELRRVFPKIQGPRK--------DDICYATQNRQDAV-RILAEQVDVMVVVGSKNSSNST 231
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L+E+AE G P Y D + I P W ++ +G+T+GAS P
Sbjct: 232 RLKELAEKLGTPGYLTDCPQDIHP-----------------EWFENARL-VGVTAGASAP 273
Query: 317 DKAVEDVLKKVFEI 330
++ V +L ++ E+
Sbjct: 274 EELVNQILDRIKEL 287
>gi|377577097|ref|ZP_09806080.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Escherichia
hermannii NBRC 105704]
gi|377541625|dbj|GAB51245.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Escherichia
hermannii NBRC 105704]
Length = 316
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 137/322 (42%), Gaps = 61/322 (18%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L E I +Q V G +++ A G + +
Sbjct: 33 IYVRHEVVHNRYVVDSLRERGAIFI------EQISEVPDGAILIFSAHGVSQAVRNEAKS 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++ + D TCP V+KV V + + +I+ G H E T G+Y N K
Sbjct: 87 RDLTVFDATCPLVTKVHMEVARASRRGEEAILIGHAGHPEVEGTM---GQY---SNPKGG 140
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
Y+ + + E L+ K D + QTT+ +T ++
Sbjct: 141 MYLVE------------SPEDVLKITVK----------DESNLSFMTQTTLSVDDTSDVI 178
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+ + G + IC AT RQ+A+ + EE D++LVVG NSSN++
Sbjct: 179 DALRSRFPKIIGPRK--------DDICYATTNRQEAVRALAEE-ADVVLVVGSKNSSNSN 229
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L E+A+ G +Y ID I E WL +G +G+T+GAS P
Sbjct: 230 RLAELAQRMGKKAYLIDDASDI-----------------DEAWL-QGAACVGVTAGASAP 271
Query: 317 DKAVEDVLKKVFEIKREEALQL 338
D V++VLK++ + EA +L
Sbjct: 272 DILVQNVLKRLQALGGSEAREL 293
>gi|386717615|ref|YP_006183941.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Stenotrophomonas maltophilia D457]
gi|384077177|emb|CCH11763.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Stenotrophomonas maltophilia D457]
Length = 316
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 134/316 (42%), Gaps = 63/316 (19%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L++ I VEE D V + V+ A G +
Sbjct: 33 IYVRHEVVHNRFVVDDLKQRGA--IFVEE----LDEVPDNNTVIFSAHGVSQAVRQEAER 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V +H + ++ G H E T
Sbjct: 87 RGLKVFDATCPLVTKVHFEVARHCRAGRDVVLIGHAGHPEVEGTM--------------- 131
Query: 137 EYVCDYILGGELNGSSSTKEAFL-EKFKKAVSKGFD-PDVDLVKVGIANQTTMLKGETEE 194
G+ N + T + +L E ++ + + P+ QTT+ +T
Sbjct: 132 ---------GQWNREAGTGQIYLVEDVEQVATLQINQPE----NFAYTTQTTLSVDDTRG 178
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
I + + G +N + IC ATQ RQDA+ + + + DL+LVVG NSSN
Sbjct: 179 IIDALRERFPAMQGPKN--------DDICYATQNRQDAVRDLAK-RCDLVLVVGSPNSSN 229
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
++ L E+A G+ SY ID I P W+ G+ IG+T+GAS
Sbjct: 230 SNRLSELARREGVESYLIDGAHEIDPA-----------------WV-AGKQHIGVTAGAS 271
Query: 315 TPDKAVEDVLKKVFEI 330
P V+ VL ++ E+
Sbjct: 272 APQVLVDGVLARLAEL 287
>gi|424834377|ref|ZP_18259088.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding
domain protein [Clostridium sporogenes PA 3679]
gi|365978723|gb|EHN14792.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding
domain protein [Clostridium sporogenes PA 3679]
Length = 638
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 147/328 (44%), Gaps = 74/328 (22%)
Query: 16 KIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLN 75
KI+ +IHN V L+ ++ P+ G D +NK D +++ + G ++ + L
Sbjct: 32 KIYTLGPLIHNNDVVNLLKGKGIE--PINIG--DVDKLNKDDTIIIRSHGVPLQTINYLK 87
Query: 76 NKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKE 135
+K + +++TTCP V+ + +K+ + Y +I G +H E + + I+
Sbjct: 88 DKRLNVINTTCPHVANIQIKAKKYYEEGYKIVIVGDENHPEVIGINGWCNNSAIISKD-- 145
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
G +N L+K KV + QTT E +E
Sbjct: 146 ---------GSNINN--------LDK----------------KVCVLCQTT----EKQEN 168
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
+ V +++K + ++FNTIC+ATQ RQ A K+ EKVD ++V+GG NSSNT
Sbjct: 169 WEKVLNILIKK------SREILAFNTICNATQVRQQAAKKL-SEKVDSMVVIGGKNSSNT 221
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L EI ++ + +++ K I + K +G+T+GAST
Sbjct: 222 TKLYEICKNNCKNTIHVENAKEIPE------------------HIYKNSNIMGVTAGAST 263
Query: 316 PDKAVEDVLKK------VFEIKREEALQ 337
PD +E+ + K + E+ + E L+
Sbjct: 264 PDWIIEEAVNKMNNNDNIIEVSKNEMLE 291
>gi|365840242|ref|ZP_09381442.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Anaeroglobus
geminatus F0357]
gi|364562032|gb|EHM39903.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Anaeroglobus
geminatus F0357]
Length = 457
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 135/312 (43%), Gaps = 70/312 (22%)
Query: 23 IIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIV 82
IIHNP + L E V PV + V G +++ + G + + + IV
Sbjct: 35 IIHNPQLVDSLSEKGVT--PV----NSLEEVADGSRLLIRSHGVGPDVYDEAEKRRLHIV 88
Query: 83 DTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAG-KYIIVKNMKEAEYVCD 141
D TCP V K K +I G+ H E ++ + + G + II+ ++EAE +
Sbjct: 89 DATCPHVKKAQQDARKVINAKKVLVIIGEKDHPEVISISQWGGNRAIIIDKVEEAEEI-- 146
Query: 142 YILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEK 201
+ E G+ QTT + ++I E
Sbjct: 147 ---------------PYCETM-----------------GVVVQTTFSQSRFKQI----ES 170
Query: 202 TMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEI 261
+ K G H + TIC AT++RQ+A ++ KVD ++V+GG NS+NT L ++
Sbjct: 171 VLAGKTG------HLDVYMTICAATRQRQEAAVELAG-KVDAMIVIGGRNSANTGRLAQV 223
Query: 262 AEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVE 321
++G P+Y +++ I P + + MH IG+T+GAST D ++
Sbjct: 224 CAEQGCPTYHVETAAEINPDD---FAGMH---------------DIGVTAGASTTDWIIQ 265
Query: 322 DVLKKVFEIKRE 333
+V+K + +++ E
Sbjct: 266 EVVKMMEDLQTE 277
>gi|91784960|ref|YP_560166.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
xenovorans LB400]
gi|91688914|gb|ABE32114.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
xenovorans LB400]
Length = 319
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 144/315 (45%), Gaps = 66/315 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V + L + I ++ + V G+ V+ A G +
Sbjct: 43 IYVRHEIVHNAYVVEDLRKKGAIFI------ERLEEVPPGNTVIFSAHGVSKAVRSEAEI 96
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYI-IVKNMKE 135
+ +++ D TCP V+KV V K ++ + ++ G H E T AG+ + +V+++++
Sbjct: 97 RGLRVYDATCPLVTKVHIEVAKMRQDGFDIVMIGHKGHPEVEGTMGQAGEGMHLVEDIED 156
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
+ + + DP+ ++ QTT+ ++
Sbjct: 157 VQAL----------------------------QLADPE----RIAFVTQTTL---SVDDA 181
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
+++ + + + IC ATQ RQDA+ K + + D+++VVG NSSN+
Sbjct: 182 AQIIAALKAKYPSIREPKKQ-----DICYATQNRQDAV-KFMAPQCDVVIVVGSPNSSNS 235
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L+E+AE G+P+Y +DS +I P W+ +G+ IG+T+GAS
Sbjct: 236 NRLRELAEKLGVPAYMVDSPDQIDP-----------------VWV-EGKRRIGVTAGASA 277
Query: 316 PDKAVEDVLKKVFEI 330
P+ + V+ ++ E+
Sbjct: 278 PEVLAQAVIARLREL 292
>gi|153941510|ref|YP_001391062.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
botulinum F str. Langeland]
gi|384462094|ref|YP_005674689.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
botulinum F str. 230613]
gi|152937406|gb|ABS42904.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase / ribosomal
protein S1 homolog [Clostridium botulinum F str.
Langeland]
gi|295319111|gb|ADF99488.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase / ribosomal
protein S1-like protein [Clostridium botulinum F str.
230613]
Length = 638
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 145/328 (44%), Gaps = 74/328 (22%)
Query: 16 KIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLN 75
KI+ +IHN V L++ ++ I +++ D +NK D +++ + G ++ + L
Sbjct: 32 KIYTLGPLIHNNDVVNLLKDKGIEPISIQD----VDKLNKDDTIIIRSHGVPLQTINYLK 87
Query: 76 NKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKE 135
+K + +++TTCP V+ + +K+ + Y +I G +H E + + I+
Sbjct: 88 DKGLNVINTTCPHVANIQIKAKKYYEEGYKIVIVGDENHPEVIGINGWCNNSAIISKD-- 145
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
G +N L+K KV + QTT + E++
Sbjct: 146 ---------GANINN--------LDK----------------KVCVLCQTTEKQENWEKV 172
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
++ K + ++FNTIC+ATQ RQ + K+ EKVD ++V+GG NSSNT
Sbjct: 173 LTILIKN----------SREILAFNTICNATQVRQQSAKKL-SEKVDSMIVIGGKNSSNT 221
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L EI + + +++ K I + K IG+T+GAST
Sbjct: 222 TKLYEICKSNCKNTIHVENAKEIPE------------------HIYKNSNIIGVTAGAST 263
Query: 316 PDKAVEDVLKK------VFEIKREEALQ 337
PD +++ + K + E+ + E L
Sbjct: 264 PDWIIKEAINKMNNNDSIIEVSKNEMLN 291
>gi|190573354|ref|YP_001971199.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Stenotrophomonas maltophilia K279a]
gi|424667585|ref|ZP_18104610.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Stenotrophomonas maltophilia Ab55555]
gi|229486014|sp|B2FU83.1|ISPH_STRMK RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|190011276|emb|CAQ44889.1| putative 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Stenotrophomonas maltophilia K279a]
gi|401069199|gb|EJP77722.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Stenotrophomonas maltophilia Ab55555]
gi|456735567|gb|EMF60318.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Stenotrophomonas maltophilia EPM1]
Length = 316
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 134/316 (42%), Gaps = 63/316 (19%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L++ I VEE D V + V+ A G +
Sbjct: 33 IYVRHEVVHNRFVVDDLKQRGA--IFVEE----LDEVPDNNTVIFSAHGVSQAVRQEAER 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V +H + ++ G H E T
Sbjct: 87 RGLKVFDATCPLVTKVHFEVARHCRAGRDVVLIGHAGHPEVEGTM--------------- 131
Query: 137 EYVCDYILGGELNGSSSTKEAFL-EKFKKAVSKGFD-PDVDLVKVGIANQTTMLKGETEE 194
G+ N + T + +L E ++ + + P+ QTT+ +T
Sbjct: 132 ---------GQWNREAGTGQIYLVEDVEQVATLQINQPE----NFAYTTQTTLSVDDTRG 178
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
I + + G +N + IC ATQ RQDA+ + + + DL+LVVG NSSN
Sbjct: 179 IIDALRERFPAMQGPKN--------DDICYATQNRQDAVRDLAK-RCDLVLVVGSPNSSN 229
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
++ L E+A G+ SY ID I P W+ G+ IG+T+GAS
Sbjct: 230 SNRLSELARREGVESYLIDGAHEIDPA-----------------WV-AGKQHIGVTAGAS 271
Query: 315 TPDKAVEDVLKKVFEI 330
P V+ VL ++ E+
Sbjct: 272 APQVLVDGVLARLAEL 287
>gi|168702833|ref|ZP_02735110.1| LytB protein [Gemmata obscuriglobus UQM 2246]
Length = 310
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 137/328 (41%), Gaps = 66/328 (20%)
Query: 1 MAFIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVV 60
MA A E +++ +EI+HN + +R +++ V + V G V+
Sbjct: 17 MAISALETALTHYGSPLYVYHEIVHNRPIVERFQKLGVVFV------NDISEVPNGGTVL 70
Query: 61 LPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT 120
A G + +N++ +D TCP V+KV K K YT I+ G H+E + T
Sbjct: 71 YSAHGVSPVIRQHSQQRNLRAIDATCPLVTKVHKEAIKFAKEGYTIILVGHEGHDEVIGT 130
Query: 121 ASFA-GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKV 179
A ++V++ E +L + K AFL
Sbjct: 131 MGEAPANMVLVEDAAGVE---------KLTLPADAKLAFL-------------------- 161
Query: 180 GIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEE 239
QTT+ E + + +++ + G + IC ATQ RQDA+ ++V E
Sbjct: 162 ---TQTTLSVDEAKNVIDALKRKYPQIVGPNK--------DDICYATQNRQDAVKQLVGE 210
Query: 240 KVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENW 299
VD +LV+G NSSN+ L E+A G P+Y ID + K+ W
Sbjct: 211 -VDKVLVLGSQNSSNSQRLAELARTNGRPAYLIDRVSEL-----------------KDEW 252
Query: 300 LPKGQITIGITSGASTPDKAVEDVLKKV 327
T+ +T+GAS P++ V+D ++ +
Sbjct: 253 FAPTD-TVLVTAGASAPEEHVQDCIEHL 279
>gi|431931804|ref|YP_007244850.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Thioflavicoccus mobilis 8321]
gi|431830107|gb|AGA91220.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Thioflavicoccus mobilis 8321]
Length = 317
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 130/314 (41%), Gaps = 68/314 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L + I ++ V G ++ A G A
Sbjct: 34 IYVRHEVVHNRYVVEGLRQRGAVFI------EELSEVPDGATLIFSAHGVATAVREAAEA 87
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEE---TVATASFAGKYIIVKNM 133
+ ++I D TCP V+KV V +H + I+ G H E T+ G +V+
Sbjct: 88 RGLRIFDATCPLVTKVHLEVARHCRSGADVILIGHRGHPEVEGTLGQCPAGGAIHLVETT 147
Query: 134 KEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETE 193
D + G E+ DPD +V QTT+ +
Sbjct: 148 -------DDVAGLEVR---------------------DPD----RVAYVTQTTL---SVD 172
Query: 194 EIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSS 253
+ +VE R ++ + + IC ATQ RQDA+ + + DLILVVG NSS
Sbjct: 173 DAAAIVEALRARFPAIQGPKK-----SDICYATQNRQDAVRDLAT-RCDLILVVGSPNSS 226
Query: 254 NTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGA 313
N++ L+E+AE G + ID + I WL + IG+T+GA
Sbjct: 227 NSNRLRELAERHGCAAKLIDGTEDI-----------------DREWLTEAS-RIGLTAGA 268
Query: 314 STPDKAVEDVLKKV 327
S P+ VE V+ ++
Sbjct: 269 SAPEVLVEQVIAQL 282
>gi|254521444|ref|ZP_05133499.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Stenotrophomonas sp. SKA14]
gi|219719035|gb|EED37560.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Stenotrophomonas sp. SKA14]
Length = 316
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 134/316 (42%), Gaps = 63/316 (19%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L++ I VEE D V + V+ A G +
Sbjct: 33 IYVRHEVVHNRFVVDDLKQRGA--IFVEE----LDEVPDNNTVIFSAHGVSQAVRQEAER 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V +H + ++ G H E T
Sbjct: 87 RGLKVFDATCPLVTKVHFEVARHCRAGRDVVLIGHAGHPEVEGTM--------------- 131
Query: 137 EYVCDYILGGELNGSSSTKEAFL-EKFKKAVSKGFD-PDVDLVKVGIANQTTMLKGETEE 194
G+ N + T + +L E ++ + + P+ QTT+ +T
Sbjct: 132 ---------GQWNREAGTGQIYLVEDVEQVATLQINQPE----NFAYTTQTTLSVDDTRG 178
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
I + + G +N + IC ATQ RQDA+ + + + DL+LVVG NSSN
Sbjct: 179 IIDALRERFPAMQGPKN--------DDICYATQNRQDAVRDLAK-RCDLVLVVGSPNSSN 229
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
++ L E+A G+ SY ID I P W+ G+ IG+T+GAS
Sbjct: 230 SNRLSELARREGVESYLIDGAHEIDPA-----------------WV-AGKQHIGVTAGAS 271
Query: 315 TPDKAVEDVLKKVFEI 330
P V+ VL ++ E+
Sbjct: 272 APQVLVDGVLARLAEL 287
>gi|433654958|ref|YP_007298666.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Thermoanaerobacterium thermosaccharolyticum M0795]
gi|433293147|gb|AGB18969.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Thermoanaerobacterium thermosaccharolyticum M0795]
Length = 286
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 145/331 (43%), Gaps = 69/331 (20%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+AY+ + + + E+IHNP V K LE ++ I D + + D +++
Sbjct: 21 MAYDQINRDDSRQTYTYGELIHNPQVVKDLEGKGIKTIG------GIDNLKENDRIIIRT 74
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
G + L K ++++D TCP+V +V V + K YT +I G +H E +
Sbjct: 75 HGIPEKTYKDLKEKKIELIDMTCPFVKRVQKIVNGYYKKGYTIVIIGDKNHPEVIG---- 130
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
+NG +E P +D K +
Sbjct: 131 ------------------------VNGWCDNSAYVIESVNDV---QLLPYID--KACVVA 161
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTT+ + E+ L++ VNE +SFNTICDAT +RQ + + + +K D+
Sbjct: 162 QTTITQKMWEDSLNLLKLK---------VNE-LVSFNTICDATNKRQSSAEE-ISKKADV 210
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++V+GG NSSNT L+ I E + +++ ++I + + +
Sbjct: 211 MIVIGGKNSSNTQKLKRICEKNCKRTIQVEN------ADEIDLSIFNDNDI--------- 255
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIKREE 334
+GIT+GASTPD +++V+ K+ I R+E
Sbjct: 256 ---VGITAGASTPDYLIQEVINKI-AINRKE 282
>gi|149175282|ref|ZP_01853904.1| LytB protein [Planctomyces maris DSM 8797]
gi|148845891|gb|EDL60232.1| LytB protein [Planctomyces maris DSM 8797]
Length = 310
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 132/309 (42%), Gaps = 64/309 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V R V + + V + ++V A G +
Sbjct: 33 VYVYHEIVHNKYVVNRFTNQGVTFV------EAVSEVPENSILVFSAHGVSPVIRNQARE 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+N++ +D TCP V+KV T K+ Y I+ G H+E + T A + I + E
Sbjct: 87 RNIRTIDATCPLVTKVHTEAIKYADAGYHIILIGHEGHDEVIGTMGEAPESITLIETPEE 146
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
++ G L AFL QTT+ EE G
Sbjct: 147 VAALEFPEGARL--------AFL-----------------------TQTTL---SVEEAG 172
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+++ + +E+ + IC AT RQ+A+ ++V +VDL+LV+G NSSN+
Sbjct: 173 RVIRSLKEKYPAIESPPKE-----DICYATTNRQEAVSELVS-RVDLVLVLGSQNSSNSK 226
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L EI + G P++ ID + + P W + + TI IT+GAS P
Sbjct: 227 RLMEIGKTAGKPAFLIDGVEEVLP-----------------EWFDQAE-TILITAGASAP 268
Query: 317 DKAVEDVLK 325
+ V+++++
Sbjct: 269 EVVVQELIQ 277
>gi|424047856|ref|ZP_17785412.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HENC-03]
gi|408883166|gb|EKM21953.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HENC-03]
Length = 317
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 146/327 (44%), Gaps = 73/327 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L++ I VEE V ++V+ A G + +
Sbjct: 33 IYVRHEVVHNRFVVEGLKQRGA--IFVEE----LHEVPDNNIVIFSAHGVSQAVRQEAKS 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++ + D TCP V+KV V + + + ++ G H E T G+Y
Sbjct: 87 RDLTVFDATCPLVTKVHMEVARASRRNMEVVLIGHAGHPEVEGTM---GQY--------- 134
Query: 137 EYVCDYILGGELNGSSSTKEAFL-------EKFKKAVSKGFDPDVDLVKVGIANQTTMLK 189
SS T +L EK K V DP DL V +QTT+
Sbjct: 135 --------------SSDTGGMYLVETPADVEKLKAIVK---DPS-DLHYV---SQTTLSV 173
Query: 190 GETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGG 249
ET ++ + + + G + IC ATQ RQDA+ ++ + VD+++VVG
Sbjct: 174 DETADVIEELRRVFPDIQGPRK--------DDICYATQNRQDAVRELSAD-VDVMVVVGS 224
Query: 250 WNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGI 309
NSSN++ L+E+AE G P Y D + I P W +G++ +G+
Sbjct: 225 KNSSNSTRLKELAEKLGTPGYLTDCPEDIMP-----------------EWF-EGKVKVGV 266
Query: 310 TSGASTPDKAVEDVLKKVFEIKREEAL 336
T+GAS P++ V +L ++ E+ EA+
Sbjct: 267 TAGASAPEELVNQILDRIKELVGAEAV 293
>gi|167585721|ref|ZP_02378109.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
ubonensis Bu]
Length = 326
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 140/314 (44%), Gaps = 64/314 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V + L++ I VEE + V G+ V+ A G +
Sbjct: 48 IYVRHEIVHNKYVVEDLKKKGA--IFVEE----LEEVPSGNTVIFSAHGVSKAVRDEAGV 101
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V K ++ ++ G H E T + + M
Sbjct: 102 RGLRVYDATCPLVTKVHVEVAKMRQDGVDIVMIGHKGHPEVEGTMGQ-----VERGMHLV 156
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
E V D ++K + A DP+ ++ + QTT+ + EI
Sbjct: 157 ESVED-----------------VQKLELA-----DPE----RIALVTQTTLSVDDAAEI- 189
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
K + E IC ATQ RQDA+ K + + D+++VVG NSSN+S
Sbjct: 190 -----IAALKAKYPKIREP--KKQDICYATQNRQDAV-KFMAPQCDVVIVVGSPNSSNSS 241
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L+E+AE RG+ +Y +D+ +I P W+ G+ IG+T+GAS P
Sbjct: 242 RLREVAEKRGVAAYMVDAPDQIDPA-----------------WV-AGKRRIGVTAGASAP 283
Query: 317 DKAVEDVLKKVFEI 330
+ + V+ ++ E+
Sbjct: 284 EVLAQAVIARLREL 297
>gi|315453348|ref|YP_004073618.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
felis ATCC 49179]
gi|315132400|emb|CBY83028.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase LytB
[Helicobacter felis ATCC 49179]
Length = 274
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 137/308 (44%), Gaps = 67/308 (21%)
Query: 23 IIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIV 82
+IHNP KRLE+ N+ V+E + + V++ G ++ L +K QI+
Sbjct: 34 LIHNPKEIKRLEQDY--NVRVQE---DVNTIEPHKKVIIRTHGIPKNDLSKLKDKGAQII 88
Query: 83 DTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDY 142
D TCP+V K VEK Y +I G +H E S++ +V N
Sbjct: 89 DATCPYVIKPQQIVEKMSAKGYQIVIFGDANHPEVKGVISYSSTPPLVVN---------- 138
Query: 143 ILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKT 202
S +E +K K K+ + +QTT ++ KL+E
Sbjct: 139 ----------SLEELQTQKLGK-------------KIALVSQTT------KQTPKLLE-- 167
Query: 203 MMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIA 262
+ F + E I FNTIC+AT + Q+A+ ++ +E VD++++VGG SSNT L IA
Sbjct: 168 -IASFLIARCAEVRI-FNTICNATFDNQEAVRELSQE-VDIMVIVGGKTSSNTKQLFHIA 224
Query: 263 EDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVED 322
++ SY ++ + P W G+ GI++GASTPD +E
Sbjct: 225 KEFCSDSYLVEDFNDLNP-----------------EWF-SGKKLCGISAGASTPDWIIEK 266
Query: 323 VLKKVFEI 330
V ++ +I
Sbjct: 267 VRVQISQI 274
>gi|271969671|ref|YP_003343867.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Streptosporangium roseum DSM 43021]
gi|270512846|gb|ACZ91124.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Streptosporangium roseum DSM 43021]
Length = 322
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 138/317 (43%), Gaps = 75/317 (23%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +I+HN V + LEE I VEE ++ V +G +VV A G +
Sbjct: 41 IYVRKQIVHNTHVVRTLEERGA--IFVEETEE----VPEGAIVVFSAHGVSPVVHQEAAR 94
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
++++ +D TCP V+KV ++ DY ++ G HEE TA A +I +
Sbjct: 95 RSLRTIDATCPLVTKVHNEAKRFASQDYDILLIGHEGHEEVEGTAGEAPDHIQL------ 148
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
++G S A + DP ++ +QTT+ ET E
Sbjct: 149 -----------VDGLDSV----------AAVQVKDPS----RLVWLSQTTLSVDETVET- 182
Query: 197 KLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGGWN 251
V + E F + + IC ATQ RQ A+ K + + L++VVG N
Sbjct: 183 ------------VSRLKERFPNLIDPPSDDICYATQNRQVAV-KEIAAQAQLVIVVGSEN 229
Query: 252 SSNTSHLQEIAEDRGI-PSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGIT 310
SSN+ L E+A D G SY +D I K+ WL G T+G+T
Sbjct: 230 SSNSKRLVEVAVDHGADASYLVDDASLI-----------------KDEWL-DGVTTVGVT 271
Query: 311 SGASTPDKAVEDVLKKV 327
SGAS PD+ V +VL ++
Sbjct: 272 SGASVPDELVSEVLARL 288
>gi|357411427|ref|YP_004923163.1| hydroxymethylbutenyl pyrophosphate reductase [Streptomyces
flavogriseus ATCC 33331]
gi|320008796|gb|ADW03646.1| hydroxymethylbutenyl pyrophosphate reductase [Streptomyces
flavogriseus ATCC 33331]
Length = 346
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 142/329 (43%), Gaps = 73/329 (22%)
Query: 2 AFIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDV---VNKGDV 58
A IA E + I++ +EI+HN V + LE+ +G DV V +G +
Sbjct: 44 AVIAVEKALEQYGAPIYVRHEIVHNKYVVQTLEK---------KGAIFVDVTAEVPEGSI 94
Query: 59 VVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETV 118
V+ A G A + + +D TCP V+KV ++ K DY ++ G HEE +
Sbjct: 95 VMFSAHGVAPTVHAEAAERKLATIDATCPLVTKVHKEAVRYAKEDYDILLIGHEGHEEVI 154
Query: 119 ATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVK 178
T+ A +I + + D + E+ S K
Sbjct: 155 GTSGEAPDHITLVDGP------DDVANVEVRDES-------------------------K 183
Query: 179 VGIANQTTMLKGET-EEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMV 237
V +QTT+ ET E +G L KF N + IC ATQ RQ A+ K+
Sbjct: 184 VVWLSQTTLSVDETMETVGAL-----KNKFP----NLLSPPSDDICYATQNRQVAVKKLA 234
Query: 238 EEKVDLILVVGGWNSSNTSHLQEIAEDRGIP-SYWIDSEKRIGPGNKIAYKLMHGELVEK 296
E+ DL++VVG NSSN+ + E+A D G P ++ +D I
Sbjct: 235 ED-ADLVIVVGSKNSSNSIRMVEVALDAGAPAAHLVDFASEI-----------------D 276
Query: 297 ENWLPKGQITIGITSGASTPDKAVEDVLK 325
E WL +G T+G+TSGAS PD V+ VL+
Sbjct: 277 EAWL-EGVTTVGLTSGASVPDVLVDGVLE 304
>gi|82701224|ref|YP_410790.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nitrosospira
multiformis ATCC 25196]
gi|82409289|gb|ABB73398.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nitrosospira
multiformis ATCC 25196]
Length = 319
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 141/319 (44%), Gaps = 61/319 (19%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + LE+ + + D V G +++ A G +
Sbjct: 39 IYVRHEVVHNRFVVEDLEKKGAVFV------ENLDEVPAGSILIFSAHGVSHAVRREAEA 92
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
++ D TCP V+KV V K + I+ G H E T A E
Sbjct: 93 GQFKVFDATCPLVTKVHIEVAKMRDQGREIIMIGHAGHPEVEGTMGQA----------EG 142
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
+ Y++ E + +EK + D + QTT+ + +
Sbjct: 143 DGPSMYLVETEED---------VEKLQVQ---------DPAHLAYVTQTTLSVDDANRVI 184
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+ ++ G + + IC ATQ RQDA+ MV++ DL++VVG NSSN++
Sbjct: 185 QALKGRFPNILGPKK--------DDICYATQNRQDAVKTMVKQ-CDLVIVVGSPNSSNSN 235
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L E+A + G+ +Y +D +++ +E WL KG++ IGIT+GAS P
Sbjct: 236 RLCEVARNAGVDAYMLDRAEQL-----------------QEAWL-KGKMRIGITAGASAP 277
Query: 317 DKAVEDVLKKVFEIKREEA 335
+ V++V+ ++ +I E+A
Sbjct: 278 EVLVQEVISRLRQIVSEQA 296
>gi|148379766|ref|YP_001254307.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
botulinum A str. ATCC 3502]
gi|153931983|ref|YP_001384064.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
botulinum A str. ATCC 19397]
gi|148289250|emb|CAL83346.1| Composite protein include: 4-hydroxy-3-methylbut-2-enyl diphosphate
reductase (N-terminus) and an RNA-associated domain
(C-terminus) [Clostridium botulinum A str. ATCC 3502]
gi|152928027|gb|ABS33527.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase / ribosomal
protein S1 homolog [Clostridium botulinum A str. ATCC
19397]
Length = 638
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 145/328 (44%), Gaps = 74/328 (22%)
Query: 16 KIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLN 75
KI+ +IHN V L++ ++ I +++ D +NK D +++ + G ++ + L
Sbjct: 32 KIYTLGPLIHNNDVVNLLKDKGIEPISIQD----VDKLNKDDTIIIRSHGVPLQTINYLK 87
Query: 76 NKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKE 135
+K + +++TTCP V+ + +K+ + Y +I G +H E + + I+
Sbjct: 88 DKGLNVINTTCPHVANIQIKAKKYYEEGYKIVIVGDENHPEVIGINGWCNNSAIISKD-- 145
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
G +N L+K KV + QTT + E++
Sbjct: 146 ---------GANINN--------LDK----------------KVCVLCQTTEKQENWEKV 172
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
++ K + ++FNTIC+ATQ RQ + K+ EKVD ++V+GG NSSNT
Sbjct: 173 LTILIKN----------SREILAFNTICNATQVRQQSAKKL-SEKVDSMIVIGGKNSSNT 221
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L EI + + +++ K I + K IG+T+GAST
Sbjct: 222 TKLYEICKSNCKNTIHVENAKEIPE------------------HIYKNSNIIGVTAGAST 263
Query: 316 PDKAVEDVLKK------VFEIKREEALQ 337
PD +++ + K + E+ + E L
Sbjct: 264 PDWIIKEAINKMNNNDSIIEVSKNEMLN 291
>gi|152983734|ref|YP_001348552.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
aeruginosa PA7]
gi|150958892|gb|ABR80917.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
aeruginosa PA7]
Length = 309
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 131/311 (42%), Gaps = 64/311 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V + LE + + ++ D V G V++ A G A
Sbjct: 33 VYVLHEIVHNRHVVRSLEGKGARFV------ERLDEVPAGAVLLFSAHGVAQRVEDQAAE 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
++ + TCP V KV ++ Y I+ G H+E + T
Sbjct: 87 AGLRAFNATCPLVLKVHRQGRQYAAKGYRIILIGDIDHQEVIGTV--------------- 131
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
G L K ++ + F D L + QTT+ +T +
Sbjct: 132 -------------GQIPAPVTVLRKVEEVGALPFAADTPLAYI---TQTTLSMDDTRAVV 175
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+ + + G + N IC A Q RQ A+ + + +V L+LVVGG NS+N+
Sbjct: 176 AALRQRYPQIVGPDTRN--------ICYAVQNRQLAV-RSLSRQVQLVLVVGGHNSANSE 226
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L+ +AE GIPS Y+L +G + +E W G T+G+++GASTP
Sbjct: 227 TLRWVAECEGIPS----------------YRLANGSELRRE-WF-DGISTVGLSAGASTP 268
Query: 317 DKAVEDVLKKV 327
+ ++DVL ++
Sbjct: 269 EAMIDDVLDRI 279
>gi|284043298|ref|YP_003393638.1| hydroxymethylbutenyl pyrophosphate reductase [Conexibacter woesei
DSM 14684]
gi|283947519|gb|ADB50263.1| hydroxymethylbutenyl pyrophosphate reductase [Conexibacter woesei
DSM 14684]
Length = 319
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 132/318 (41%), Gaps = 74/318 (23%)
Query: 12 FPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEM 71
F +++ EI+HN V ++L I VE+ + V +G VV A G A
Sbjct: 33 FHGAPVYVRKEIVHNKHVVEQLRSRGA--IFVEDETE----VPEGSTVVFSAHGVAPSVH 86
Query: 72 VTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVK 131
+ + +D TCP V+KV + DYT ++ G HEE T A +I+
Sbjct: 87 ENSAKRGLNTIDATCPLVTKVHREAVRFAADDYTIVLIGHAGHEEVEGTMGEAPDHIV-- 144
Query: 132 NMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGE 191
+ E E D + G DPD +V +QTT+ E
Sbjct: 145 -LVETEDDVDALEIG------------------------DPD----RVAYISQTTLSVDE 175
Query: 192 TEEIGKLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILV 246
T I + + E F + + IC AT RQ A+ K + DL+LV
Sbjct: 176 TRAI-------------IARLREKFPNITGPRTDDICYATTNRQLAV-KQLARACDLVLV 221
Query: 247 VGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQIT 306
+G NSSN+ L ++ + G SY ID E ++ E WL +G+
Sbjct: 222 IGSQNSSNSQRLVDVTRELGTDSYLIDHEGQV-----------------DETWL-EGRRV 263
Query: 307 IGITSGASTPDKAVEDVL 324
+GITSGAS P++ V+ ++
Sbjct: 264 VGITSGASAPEELVQRLV 281
>gi|168180380|ref|ZP_02615044.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase / ribosomal
protein S1 homolog [Clostridium botulinum NCTC 2916]
gi|226949048|ref|YP_002804139.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding
domain-containing protein [Clostridium botulinum A2 str.
Kyoto]
gi|182668877|gb|EDT80855.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase / ribosomal
protein S1 homolog [Clostridium botulinum NCTC 2916]
gi|226843882|gb|ACO86548.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase / ribosomal
protein S1 homolog [Clostridium botulinum A2 str. Kyoto]
Length = 638
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 145/328 (44%), Gaps = 74/328 (22%)
Query: 16 KIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLN 75
KI+ +IHN V L++ ++ I +++ D +NK D +++ + G ++ + L
Sbjct: 32 KIYTLGPLIHNNDVVNLLKDKGIEPISIQD----VDKLNKDDTIIIRSHGVPLQTINYLK 87
Query: 76 NKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKE 135
+K + +++TTCP V+ + +K+ + Y +I G +H E + + I+
Sbjct: 88 DKGLNVINTTCPHVANIQIKAKKYYEEGYKIVIVGDENHPEVIGINGWCNNSAIISKD-- 145
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
G +N L+K KV + QTT + E++
Sbjct: 146 ---------GANINN--------LDK----------------KVCVLCQTTEKQENWEKV 172
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
++ K + ++FNTIC+ATQ RQ + K+ EKVD ++V+GG NSSNT
Sbjct: 173 LTILIKN----------SREILAFNTICNATQVRQQSAKKL-SEKVDSMIVIGGKNSSNT 221
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L EI + + +++ K I + K IG+T+GAST
Sbjct: 222 TKLYEICKSNCKNTIHVENAKEIPE------------------HIYKNSNIIGVTAGAST 263
Query: 316 PDKAVEDVLKK------VFEIKREEALQ 337
PD +++ + K + E+ + E L
Sbjct: 264 PDWIIKEAINKMNNNDSIIEVSKNEMLN 291
>gi|256374878|ref|YP_003098538.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Actinosynnema
mirum DSM 43827]
gi|255919181|gb|ACU34692.1| hydroxymethylbutenyl pyrophosphate reductase [Actinosynnema mirum
DSM 43827]
Length = 314
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 140/318 (44%), Gaps = 73/318 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ EI+HN V + L + + + D V +G +VV A G + + +
Sbjct: 35 VYVRKEIVHNKHVVETLSKRGAIFV------NETDEVPEGALVVFSAHGVSPKVHEEAAD 88
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
++++ +D TCP V+KV ++ + DY ++ G HEE TA A +I + + E
Sbjct: 89 RSLRTIDATCPLVTKVHKEAQRFAREDYDILLIGHEGHEEVEGTAGEAPDHIQLVDTAE- 147
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
A + DP KV +QTT+
Sbjct: 148 --------------------------DVAKVEVRDPS----KVIWLSQTTLS-------- 169
Query: 197 KLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGGWN 251
V++TM+R V + E F + IC AT RQ A+ M E DL+LVVG N
Sbjct: 170 --VDETMVR---VRQLKERFPDLQEPPSDDICYATSNRQVAVKTMAPE-CDLVLVVGSKN 223
Query: 252 SSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITS 311
SSN+ L E+A + G K +Y + + E V+ E WL +G T+G+TS
Sbjct: 224 SSNSVRLVEVA---------------LQAGAKASYLIDYAEEVD-EAWL-EGVGTVGVTS 266
Query: 312 GASTPDKAVEDVLKKVFE 329
GAS PD V D+LK + E
Sbjct: 267 GASVPDILVMDLLKHLAE 284
>gi|269962532|ref|ZP_06176880.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio harveyi
1DA3]
gi|269832727|gb|EEZ86838.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio harveyi
1DA3]
Length = 321
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 146/327 (44%), Gaps = 73/327 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L++ I VEE V ++V+ A G + +
Sbjct: 37 IYVRHEVVHNRFVVEGLKQRGA--IFVEE----LHEVPDNNIVIFSAHGVSQAVRQEAKS 90
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++ + D TCP V+KV V + + + ++ G H E T G+Y
Sbjct: 91 RDLTVFDATCPLVTKVHMEVARASRRNMEVVLIGHAGHPEVEGTM---GQY--------- 138
Query: 137 EYVCDYILGGELNGSSSTKEAFL-------EKFKKAVSKGFDPDVDLVKVGIANQTTMLK 189
SS T +L EK K V DP DL V +QTT+
Sbjct: 139 --------------SSDTGGMYLVETPADVEKLKAIVK---DPS-DLHYV---SQTTLSV 177
Query: 190 GETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGG 249
ET ++ + + + G + IC ATQ RQDA+ ++ + VD+++VVG
Sbjct: 178 DETADVIEELRRVFPDIQGPRK--------DDICYATQNRQDAVRELSAD-VDVMVVVGS 228
Query: 250 WNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGI 309
NSSN++ L+E+AE G P Y D + I P W +G++ +G+
Sbjct: 229 KNSSNSTRLKELAEKLGTPGYLTDCPEDIMP-----------------EWF-EGKVKVGV 270
Query: 310 TSGASTPDKAVEDVLKKVFEIKREEAL 336
T+GAS P++ V +L ++ E+ EA+
Sbjct: 271 TAGASAPEELVNQILDRIKELVGAEAV 297
>gi|153937572|ref|YP_001387604.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
botulinum A str. Hall]
gi|152933486|gb|ABS38985.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase / ribosomal
protein S1 homolog [Clostridium botulinum A str. Hall]
Length = 638
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 145/328 (44%), Gaps = 74/328 (22%)
Query: 16 KIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLN 75
KI+ +IHN V L++ ++ I +++ D +NK D +++ + G ++ + L
Sbjct: 32 KIYTLGPLIHNNDVVNLLKDKGIEPISIQD----VDKLNKDDTIIIRSHGVPLQTINYLK 87
Query: 76 NKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKE 135
+K + +++TTCP V+ + +K+ + Y +I G +H E + + I+
Sbjct: 88 DKGLNVINTTCPHVANIQIKAKKYYEEGYKIVIVGDENHPEVIGINGWCNNSAIISKD-- 145
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
G +N L+K KV + QTT + E++
Sbjct: 146 ---------GANINN--------LDK----------------KVCVLCQTTEKQENWEKV 172
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
++ K + ++FNTIC+ATQ RQ + K+ EKVD ++V+GG NSSNT
Sbjct: 173 LTILIKN----------SREILAFNTICNATQVRQQSAKKL-SEKVDSMIVIGGKNSSNT 221
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L EI + + +++ K I + K IG+T+GAST
Sbjct: 222 TKLYEICKSNCKNTIHVENAKEIPE------------------HIYKNSNIIGVTAGAST 263
Query: 316 PDKAVEDVLKK------VFEIKREEALQ 337
PD +++ + K + E+ + E L
Sbjct: 264 PDWIIKEAINKMNNNDSIIEVSKNEMLN 291
>gi|326793619|ref|YP_004311439.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Marinomonas
mediterranea MMB-1]
gi|326544383|gb|ADZ89603.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Marinomonas
mediterranea MMB-1]
Length = 316
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 139/325 (42%), Gaps = 60/325 (18%)
Query: 14 EEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVT 73
E I++ +E++HN V + L+ + + D V +V+ A G +
Sbjct: 32 EAPIYVRHEVVHNKFVVESLKGRGAVFV------DELDQVPDDKIVIFSAHGVSQAVKTE 85
Query: 74 LNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNM 133
+ + +++ D TCP V+KV V ++ + ++ G H E T G+Y
Sbjct: 86 ASRRGLKVFDATCPLVTKVHLEVVRYARDGMECVLIGHDGHPEVEGTM---GQY------ 136
Query: 134 KEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETE 193
D GG + + ++ A K DPD K+ QTT+ +T
Sbjct: 137 -------DTSKGGAIYLVENAEDV-------ATLKVSDPD----KLAFVTQTTLSMDDTS 178
Query: 194 EIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSS 253
+ + + G + IC ATQ RQDA+ K + DL+LVVG NSS
Sbjct: 179 VVIDALRQRFPNICGPRK--------DDICYATQNRQDAV-KTLASDCDLVLVVGSVNSS 229
Query: 254 NTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGA 313
N++ L+E+AE G ++ ID+ I + WL G ++GIT+GA
Sbjct: 230 NSNRLRELAERMGTKAHLIDNASEI-----------------QCEWL-DGVSSVGITAGA 271
Query: 314 STPDKAVEDVLKKVFEIKREEALQL 338
S P+ V DV++++ EE +L
Sbjct: 272 SAPEVLVTDVIQRLVSEGGEEPKEL 296
>gi|383191670|ref|YP_005201798.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase [Rahnella
aquatilis CIP 78.65 = ATCC 33071]
gi|371589928|gb|AEX53658.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase [Rahnella
aquatilis CIP 78.65 = ATCC 33071]
Length = 317
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 137/312 (43%), Gaps = 62/312 (19%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L + I +Q V G +++ A G + +
Sbjct: 33 IYVRHEVVHNRYVVDSLRQRGAVFI------EQISEVPDGSILIFSAHGVSQAVRAEAKS 86
Query: 77 KNVQIV-DTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKE 135
+++ ++ D TCP V+KV V + + +I+ G H E T G+Y N K
Sbjct: 87 RDLTMLFDATCPLVTKVHMEVARASRKGTEAILIGHAGHPEVEGTM---GQY---SNPKG 140
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
Y+ EA + +K V D + QTT+ +T +
Sbjct: 141 GMYLV---------------EAPEDVYKLQVK-------DENNLCFMTQTTLSVDDTSAV 178
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
+ + + G + IC AT RQ+A+ + + + D++LVVG NSSN+
Sbjct: 179 IDALRERFPKIIGPRK--------DDICYATTNRQEAV-RTLADGADVVLVVGSKNSSNS 229
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L E+A+ G+PSY IDS I +E+WL + +IG+T+GAS
Sbjct: 230 NRLAELAQRVGVPSYLIDSAADI-----------------QESWLKDAK-SIGVTAGASA 271
Query: 316 PDKAVEDVLKKV 327
PD V+DV+ K+
Sbjct: 272 PDILVQDVISKL 283
>gi|52425804|ref|YP_088941.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mannheimia
succiniciproducens MBEL55E]
gi|71152188|sp|Q65RQ4.1|ISPH_MANSM RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|52307856|gb|AAU38356.1| LytB protein [Mannheimia succiniciproducens MBEL55E]
Length = 314
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 135/314 (42%), Gaps = 61/314 (19%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L E + VEE + V G +V+ A G + N
Sbjct: 33 IYVRHEVVHNRFVVNGLRERGA--VFVEE----LNEVPDGAIVIFSAHGVSQAVRQEAKN 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+N+++ D TCP V+KV V + + +I+ G H E T G+Y
Sbjct: 87 RNLKVFDATCPLVTKVHMQVARASRKGTKAILIGHEGHPEVQGTM---GQY--------- 134
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
D GG +E + G + +L QTT+ +T ++
Sbjct: 135 ----DNPEGGIF---------LVENVEDIAKLGLKDNEELT---FMTQTTLSIDDTSDVI 178
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
++ G N IC AT RQ A+ ++ E+ DL++VVG NSSN++
Sbjct: 179 VALKAKYPAIQGPRK--------NDICYATTNRQQAVRELAEQS-DLVIVVGSKNSSNSN 229
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L E+A G+P+ ID I P +WL KG TIG+T+GAS P
Sbjct: 230 RLAELASRMGVPAKLIDDSNDIEP-----------------DWL-KGINTIGVTAGASAP 271
Query: 317 DKAVEDVLKKVFEI 330
+ V+ V+ ++ E+
Sbjct: 272 EVLVQSVIARLKEL 285
>gi|319786585|ref|YP_004146060.1| hydroxymethylbutenyl pyrophosphate reductase [Pseudoxanthomonas
suwonensis 11-1]
gi|317465097|gb|ADV26829.1| hydroxymethylbutenyl pyrophosphate reductase [Pseudoxanthomonas
suwonensis 11-1]
Length = 316
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 137/314 (43%), Gaps = 59/314 (18%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L A I VEE D V G+ V+ A G + +
Sbjct: 33 IYVRHEVVHNRFVVDDLR--ARGAIFVEE----LDEVPDGNTVIFSAHGVSKDVRNEAAK 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V +H + ++ G H E T M +
Sbjct: 87 RGLKVFDATCPLVTKVHLEVARHCRAGRDVVLIGHAGHPEVEGT------------MGQW 134
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
+ C GG GS E + V++ P+ + QTT+ +T I
Sbjct: 135 DAQC----GG---GSIYLVEGVEDVATLQVAQ---PE----NLFYTTQTTLSVDDTRGII 180
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+++ G +N + IC ATQ RQDA+ ++ + DL+LVVG NSSN++
Sbjct: 181 DALQRRFPAIQGPKN--------DDICYATQNRQDAVRELAH-RCDLVLVVGSPNSSNSN 231
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L E+A G+ SY ID I P W+ G+ +G+T+GAS P
Sbjct: 232 RLAELARREGVESYLIDGAHEIDPA-----------------WV-AGKRNVGLTAGASAP 273
Query: 317 DKAVEDVLKKVFEI 330
V+ V+ ++ E+
Sbjct: 274 QVLVDGVIARLREL 287
>gi|260913218|ref|ZP_05919700.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pasteurella
dagmatis ATCC 43325]
gi|260632805|gb|EEX50974.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pasteurella
dagmatis ATCC 43325]
Length = 314
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 135/314 (42%), Gaps = 61/314 (19%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L E I VEE D V G +V+ A G + N
Sbjct: 33 IYVRHEVVHNRFVVNGLRERGA--IFVEE----LDEVPNGAIVIFSAHGVSQAVRQEAKN 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+N+++ D TCP V+KV V + + +I+ G H E T G+Y
Sbjct: 87 RNLKVFDATCPLVTKVHMQVARASRKGTKAILIGHEGHPEVEGTM---GQY--------- 134
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
D GG +E + G + +L QTT+ +T E+
Sbjct: 135 ----DNPEGGIF---------LVESVEDIAKLGLKQEDELT---FMTQTTLSIDDTSEV- 177
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+E + ++ + N IC AT RQ A+ ++ ++ DL++VVG NSSN++
Sbjct: 178 --IEALKQKYPAIQGPRK-----NDICYATTNRQQAVRELAQQS-DLVIVVGSKNSSNSN 229
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L E+A G+ S ID I P WL TIGIT+GAS P
Sbjct: 230 RLAELASRMGVMSKLIDDADDIEP-----------------QWLENVN-TIGITAGASAP 271
Query: 317 DKAVEDVLKKVFEI 330
+ V+ V+K++ E+
Sbjct: 272 EVLVQSVVKRLQEL 285
>gi|152998222|ref|YP_001343057.1| hydroxymethylbutenyl pyrophosphate reductase [Marinomonas sp.
MWYL1]
gi|150839146|gb|ABR73122.1| hydroxymethylbutenyl pyrophosphate reductase [Marinomonas sp.
MWYL1]
Length = 316
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 145/319 (45%), Gaps = 70/319 (21%)
Query: 14 EEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVT 73
E I++ +E++HN V + L+ A + V+E D V ++V+ A G +
Sbjct: 32 EAPIYVRHEVVHNKFVVESLK--ARGAVFVDE----LDQVPDDNIVIFSAHGVSKAVRDE 85
Query: 74 LNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNM 133
N+ +++ D TCP V+KV V ++ + ++ G H E T G+Y
Sbjct: 86 ATNRGLKVFDATCPLVTKVHLEVLRYSRDGMECVLIGHDGHPEVEGTM---GQY------ 136
Query: 134 KEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETE 193
D GG + S A +EK + +P+ ++ QTT+ +T
Sbjct: 137 -------DDRQGGAIYLVESP--ADVEKLEVK-----NPE----RLAFVTQTTLSMDDTS 178
Query: 194 EIGKLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVG 248
+ ++ + +HF + IC ATQ RQDA+ + EE +L+LVVG
Sbjct: 179 VV-------------IDALRKHFPLIRGPKKDDICYATQNRQDAVKTLAEES-ELVLVVG 224
Query: 249 GWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIG 308
NSSN++ L+E+AE G +Y ID+ I + +WL KG +IG
Sbjct: 225 SVNSSNSNRLRELAERMGAKAYLIDNASEI-----------------QCDWL-KGIRSIG 266
Query: 309 ITSGASTPDKAVEDVLKKV 327
+T+GAS P+ V +V+ ++
Sbjct: 267 VTAGASAPEVLVNEVIDRL 285
>gi|237809687|ref|YP_002894127.1| hydroxymethylbutenyl pyrophosphate reductase [Tolumonas auensis DSM
9187]
gi|259493954|sp|C4LD10.1|ISPH_TOLAT RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|237501948|gb|ACQ94541.1| hydroxymethylbutenyl pyrophosphate reductase [Tolumonas auensis DSM
9187]
Length = 310
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 139/319 (43%), Gaps = 71/319 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +E++HN V L+ M I V+E D + G+ V+ A G
Sbjct: 33 VYVRHEVVHNKYVVDELKAMGA--IFVDE----LDEIPDGNTVIFSAHGVPKRVREEARK 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +Q+ D TCP V+KV V + + ++ G H E T G+Y
Sbjct: 87 RGLQVFDATCPLVTKVHMEVHRASRKGQEVVLIGHKGHPEVEGTL---GQY--------- 134
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
+ NG T +E + S P KV QTT+ ET +I
Sbjct: 135 ----------DENG---TGMYLVEDANQVDSL---PVQQPEKVSFVTQTTLSVDETRDI- 177
Query: 197 KLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGGWN 251
++ + EHF + + IC ATQ RQDA+ + + +VD++LVVG N
Sbjct: 178 ------------IDALREHFPAIQGPRKDDICYATQNRQDAV-RALAPQVDVMLVVGSKN 224
Query: 252 SSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITS 311
SSN++ L+E+AE G +Y +D ++ ++ W ++G+T+
Sbjct: 225 SSNSNRLRELAERLGTRAYLLDDASQL-----------------QDEWFTNVN-SVGVTA 266
Query: 312 GASTPDKAVEDVLKKVFEI 330
GAS P+ V+ V+ +++++
Sbjct: 267 GASAPEVLVQSVIDRLYQL 285
>gi|407368562|ref|ZP_11115094.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
mandelii JR-1]
Length = 315
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 138/312 (44%), Gaps = 62/312 (19%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L A I VEE D V +V+ A G +
Sbjct: 33 IYVRHEVVHNKFVVEDLR--ARGAIFVEE----LDQVPDDVIVIFSAHGVSQAVRTEAAG 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V ++ + I+ G H E T
Sbjct: 87 RGLKVFDATCPLVTKVHIEVARYSRDGRECILIGHAGHPEVEGTM--------------- 131
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKK-AVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
G+ +GS+ +E K A + +PD K+ QTT+ +T
Sbjct: 132 ---------GQYDGSNGGAIYLVEDEKDVAALQVVNPD----KLAFVTQTTLSMDDTS-- 176
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
++++ R + + + IC ATQ RQDA+ ++ +E D++LVVG NSSN+
Sbjct: 177 -RVIDALRARFPAIGGPRK-----DDICYATQNRQDAVKQLADE-CDVVLVVGSPNSSNS 229
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L+E+AE P+Y ID + + +++W G IGIT+GAS
Sbjct: 230 NRLRELAERMATPAYLIDGAEDL-----------------QKSWF-DGVERIGITAGASA 271
Query: 316 PDKAVEDVLKKV 327
P+ V V++++
Sbjct: 272 PEVLVRGVIQQL 283
>gi|187779599|ref|ZP_02996072.1| hypothetical protein CLOSPO_03195 [Clostridium sporogenes ATCC
15579]
gi|187773224|gb|EDU37026.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
sporogenes ATCC 15579]
Length = 638
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 147/328 (44%), Gaps = 74/328 (22%)
Query: 16 KIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLN 75
KI+ +IHN V L+ ++ P+ G D +NK D +++ + G ++ + L
Sbjct: 32 KIYTLGPLIHNNDVVNLLKGKGIE--PINIG--DVDKLNKDDTIIIRSHGVPLQTINYLK 87
Query: 76 NKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKE 135
+K + +++TTCP V+ + +K+ + Y +I G +H E + + I+
Sbjct: 88 DKGLNVINTTCPHVANIQIKAKKYYEEGYKIVIVGDENHPEVIGINGWCNNSAIISKD-- 145
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
G +N L+K KV + QTT E +E
Sbjct: 146 ---------GSNINN--------LDK----------------KVCVLCQTT----EKQEN 168
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
+ V +++K + ++FNTIC+ATQ RQ A K+ EKVD ++V+GG NSSNT
Sbjct: 169 WEKVLNILIKK------SREILAFNTICNATQVRQQAAKKL-SEKVDSMVVIGGKNSSNT 221
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L EI ++ + +++ K I + K IG+T+GAST
Sbjct: 222 TKLYEICKNNCKNTIHVENAKEIPE------------------HIYKNSNIIGVTAGAST 263
Query: 316 PDKAVEDVLKK------VFEIKREEALQ 337
PD +++ + K + E+ + E L+
Sbjct: 264 PDWIIKEAVNKMNNNDNIIEVSKNEMLE 291
>gi|91978035|ref|YP_570694.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Rhodopseudomonas palustris BisB5]
gi|91684491|gb|ABE40793.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Rhodopseudomonas palustris BisB5]
Length = 314
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 139/317 (43%), Gaps = 70/317 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAA--VEEMVTL 74
+++ +EI+HN V + L+ A I VE+ V V V A G A VEE
Sbjct: 39 VYVRHEIVHNKYVVESLK--AKGAIFVED----LSEVPPKAVTVFSAHGVARSVEEEAA- 91
Query: 75 NNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-ASFAGKYIIVKNM 133
+ + +++ TCP V+KV +++ T I+ G H E T G ++V+N+
Sbjct: 92 -ARGLPVLNATCPLVTKVHNQGKRYTSKGRTLILIGHAGHPEVEGTMGQVPGPVLLVQNL 150
Query: 134 KEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETE 193
++ L + T+ A++ QTT+ +T+
Sbjct: 151 EDV---------AALTLPADTQVAYI-----------------------TQTTLSVDDTK 178
Query: 194 EIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSS 253
+I + K G + IC ATQ RQ A+ M + VDLILVVG NSS
Sbjct: 179 DIIAALSKRFSDIQGPDT--------RDICYATQNRQSAVRTM-SKLVDLILVVGANNSS 229
Query: 254 NTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGA 313
N++ L+EI + GIPSY I + P +WL G+ +GIT+GA
Sbjct: 230 NSNRLREIGTEAGIPSYLIADGSELNP-----------------DWL-VGKKAVGITAGA 271
Query: 314 STPDKAVEDVLKKVFEI 330
S P+ V+DV++ + I
Sbjct: 272 SAPEVLVDDVIEALRRI 288
>gi|221135356|ref|ZP_03561659.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Glaciecola sp.
HTCC2999]
Length = 314
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 136/316 (43%), Gaps = 61/316 (19%)
Query: 14 EEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVT 73
E I++ +E++HN V L+E + VEE V +V+ A G +
Sbjct: 30 EHPIYVRHEVVHNKFVVDGLKERGA--VFVEE----LHQVPDDSIVIFSAHGVSQAVRTE 83
Query: 74 LNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNM 133
+ +++ D TCP V+KV V + K I+ G H E T G+Y N
Sbjct: 84 ATQRGLKVFDATCPLVTKVHMEVMRASKKGIECILIGHKGHPEVEGTM---GQY---DNP 137
Query: 134 KEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETE 193
+ Y+ + + ++A + K +PD + +QTT+ +T
Sbjct: 138 QGGIYLVE-----------TAEDARQLQVK-------NPDA----LYYCSQTTLSVDDTA 175
Query: 194 EIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSS 253
++ + +T G + IC ATQ RQDA+ +M DL+LVVG NSS
Sbjct: 176 DVIDALRETFPNIDGPRK--------DDICYATQNRQDAVREMAV-SCDLLLVVGATNSS 226
Query: 254 NTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGA 313
N++ L E+A G PSY ID I P WL +G+ IG+T+GA
Sbjct: 227 NSNRLSELAVKLGTPSYLIDDASMIQP-----------------QWL-EGKQAIGVTAGA 268
Query: 314 STPDKAVEDVLKKVFE 329
S P+ V+ V+ + E
Sbjct: 269 SAPEILVQGVIDALHE 284
>gi|149911066|ref|ZP_01899694.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Moritella sp.
PE36]
gi|149805892|gb|EDM65880.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Moritella sp.
PE36]
Length = 314
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 140/319 (43%), Gaps = 71/319 (22%)
Query: 14 EEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVT 73
E +++ +E++HN V L+E + VEE D V G VV+ A G +
Sbjct: 30 ETPVYVRHEVVHNRYVVDGLKENGA--VFVEE----LDEVPDGRVVIFSAHGVSKAVQAE 83
Query: 74 LNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNM 133
+++++ D TCP V+KV V + + ++ G H E T G+Y N
Sbjct: 84 AKRRDLKVFDATCPLVTKVHMEVTRASRRGIECVLIGHKGHPEVEGTM---GQY---DNA 137
Query: 134 KEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETE 193
Y+ + I + E ++ D+ + ++QTT+ +
Sbjct: 138 DGGMYLVESI--------ADVAELSVK--------------DVNNLTYSSQTTLSVDDCS 175
Query: 194 EIGKLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVG 248
I ++ + E F + IC ATQ RQDA+ K+ VD++ VVG
Sbjct: 176 GI-------------IDALRERFPEIKGPRKDDICYATQNRQDAVSKLAG-MVDIMFVVG 221
Query: 249 GWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIG 308
NSSN++ L+E +E+ G+PSY ID+ I P L +G++ +G
Sbjct: 222 SKNSSNSNRLREKSENLGVPSYLIDNAGDIDP------------------VLLEGKLKVG 263
Query: 309 ITSGASTPDKAVEDVLKKV 327
+T+GAS P ++ V++K+
Sbjct: 264 VTAGASAPKILIDQVVEKL 282
>gi|71891907|ref|YP_277637.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Candidatus
Blochmannia pennsylvanicus str. BPEN]
gi|123641144|sp|Q493S1.1|ISPH_BLOPB RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|71796013|gb|AAZ40764.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase, 4Fe-4S
protein [Candidatus Blochmannia pennsylvanicus str.
BPEN]
Length = 311
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 142/313 (45%), Gaps = 63/313 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAA--VEEMVTL 74
I++ +E++HN V +L + V I ++ + V G V++ A G + ++E +
Sbjct: 33 IYVRHELVHNDYVVTQLSKKGVIFI------ERLNEVPNGSVLIFSAHGVSKKIQEQSKI 86
Query: 75 NNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMK 134
KN+ I+D TCP V+KV V + + D I+ G H E T G+YI V N +
Sbjct: 87 --KNLIIIDATCPLVTKVHKEVSRANRNDMEVILIGHSGHPEVEGTM---GQYISV-NSR 140
Query: 135 EAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEE 194
+ Y+ + S +A+ + + F QTT+ +T E
Sbjct: 141 QKIYLVE-----------SQADAWSVQVNQPNHLFF-----------VTQTTLSIDDTAE 178
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
I ++ K G N IC AT RQ+A+ K + V++I VVG SSN
Sbjct: 179 IIAILNKRFPNIMGPRK--------NDICYATFNRQNAL-KNLAPMVEMIFVVGSITSSN 229
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
+ L E+ +RIG KI Y + H ++K NWL +G IGIT+GAS
Sbjct: 230 SVRLMELG-------------RRIG---KITYLISHANDIQK-NWL-RGVNNIGITAGAS 271
Query: 315 TPDKAVEDVLKKV 327
PD V V++K+
Sbjct: 272 APDILVLQVIEKL 284
>gi|254248385|ref|ZP_04941705.1| Penicillin tolerance protein [Burkholderia cenocepacia PC184]
gi|124874886|gb|EAY64876.1| Penicillin tolerance protein [Burkholderia cenocepacia PC184]
Length = 317
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 128/313 (40%), Gaps = 68/313 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTL-- 74
+++ +EI+HN V L+ + + D + + V V A G V +MV
Sbjct: 33 VYVRHEIVHNRRVVDGLKRKGAVFV------ESLDDIPEQAVTVFSAHG--VGQMVEAEA 84
Query: 75 NNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMK 134
+ + ++D TCP V+KV ++ T ++ G H E V T A +
Sbjct: 85 RQRGLHVLDATCPLVAKVHVQARRYASQGKTVVLIGHAGHPEVVGTLDQAPDATV----- 139
Query: 135 EAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEE 194
+E + F D L + QTT+ +T +
Sbjct: 140 -----------------------LVESKADVAALPFAADAPLAYI---TQTTLSVDDTRD 173
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
I + R G+ N H IC ATQ RQ A+ ++ +V+L+LV+G SSN
Sbjct: 174 I---IYALKQRYPGIVGPNVH-----DICYATQNRQTAVRELCR-RVELMLVIGARYSSN 224
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
T L EIA + GIPS+ I +GP W +G T+GITSGAS
Sbjct: 225 TVRLHEIALESGIPSHLIADAGELGP-----------------QWF-QGIATVGITSGAS 266
Query: 315 TPDKAVEDVLKKV 327
P+ V++V+ +
Sbjct: 267 APETLVDEVIAAL 279
>gi|297183893|gb|ADI20015.1| penicillin tolerance protein [uncultured gamma proteobacterium
EB000_65A11]
Length = 310
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 151/315 (47%), Gaps = 66/315 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQN-IPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLN 75
I++ +E++HN TV +EE+ ++ I V+E + V +G V+ A G + +
Sbjct: 35 IYVRHEVVHNRTV---VEELIIKGAIFVDEIAE----VPEGATVIFSAHGVSQQVRKEAE 87
Query: 76 NKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKE 135
+ V + D TCP V+KV + K + +I+ G H E T G+Y ++
Sbjct: 88 ARKVLVFDATCPLVTKVHNEISVFSKRNQEAILIGHAGHPEVEGTM---GQY------ED 138
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
+ Y++ E + V + DP+ V QTT+ ++
Sbjct: 139 PNLI--YLVEDESDVD--------------VLELKDPE----NVAYVTQTTL---SVDDT 175
Query: 196 GKLVEKTMMRKFG-VENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
++++K + RKF ++ + + IC ATQ RQDA+ ++ E D ILVVG NSSN
Sbjct: 176 ARVIDK-LRRKFPKIQGPRK-----DDICYATQNRQDAVKQLAGE-CDRILVVGSANSSN 228
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
++ L+E+AE G+ +Y ID+ + I P WL G +IG+TSGAS
Sbjct: 229 SNRLRELAERLGVAAYLIDTAEDIEP-----------------KWL-VGAKSIGVTSGAS 270
Query: 315 TPDKAVEDVLKKVFE 329
P+ V++V++ + E
Sbjct: 271 APEHLVQEVVQFIKE 285
>gi|379734361|ref|YP_005327866.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Blastococcus
saxobsidens DD2]
gi|378782167|emb|CCG01827.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 [Blastococcus
saxobsidens DD2]
Length = 323
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 139/324 (42%), Gaps = 65/324 (20%)
Query: 2 AFIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVL 61
A +A E + +++ +I+HN V LE I VEE D V +G VVV
Sbjct: 23 AVVAVERTLEIHGAPVYVRKQIVHNKHVVATLERRGA--IFVEE----TDEVPEGSVVVF 76
Query: 62 PAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATA 121
A G + + ++ +D TCP V+KV ++ + D+ ++ G HEE TA
Sbjct: 77 SAHGVSPAVHQEATARQLRTIDATCPLVTKVHQEAKRFARDDFDILLIGHRGHEEVEGTA 136
Query: 122 SFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGI 181
A ++ + ++G+ + DP+ KV
Sbjct: 137 GEAPAHVQL-----------------VDGAQDVANVQVR----------DPE----KVVW 165
Query: 182 ANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKV 241
+QTT+ +E V++ R G+++ + IC ATQ RQ A+ +M E
Sbjct: 166 LSQTTL---SVDETLATVDQLKNRFPGLQSPPS-----DDICYATQNRQQAVKQMAAE-C 216
Query: 242 DLILVVGGWNSSNTSHLQEIAEDRGI-PSYWIDSEKRIGPGNKIAYKLMHGELVEKENWL 300
DL+LVVG NSSN+ L E+A + G SY +D I P WL
Sbjct: 217 DLVLVVGSTNSSNSVRLVEVALEAGARASYLVDYAAEIDPA-----------------WL 259
Query: 301 PKGQITIGITSGASTPDKAVEDVL 324
G T+G+TSGAS P+ V +VL
Sbjct: 260 -DGVSTVGVTSGASVPEILVSEVL 282
>gi|384262359|ref|YP_005417546.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Rhodospirillum
photometricum DSM 122]
gi|378403460|emb|CCG08576.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Rhodospirillum
photometricum DSM 122]
Length = 389
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 136/328 (41%), Gaps = 72/328 (21%)
Query: 14 EEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFG---AAVEE 70
E +++ +EI+HN V + L + + D + G + V A G A V+E
Sbjct: 94 EHPVYVRHEIVHNKHVVESLRSKGALFV------DELDEIPDGALTVFSAHGVPKAVVDE 147
Query: 71 MVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-ASFAGKYII 129
+ + +VD TCP VS+V + H ++ G H E T G +
Sbjct: 148 AA---RRTLPVVDATCPLVSRVHKEGQNHVAKGREVVLIGHEGHPEVEGTQGQIPGGVHL 204
Query: 130 VKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLK 189
V ++ E + ++S DP+ ++ QTT+
Sbjct: 205 VSRPEDVERL-------------------------SIS---DPN----EIAYVTQTTLSV 232
Query: 190 GETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGG 249
+T E V + + R+F N IC ATQ RQ A+ ++ E DL+LVVG
Sbjct: 233 DDTRE----VIEALKRRFP----NIQGPDVKDICYATQNRQSAVREIARE-ADLLLVVGA 283
Query: 250 WNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGI 309
NSSN++ L+EI G PSY ID + P WL G T+ +
Sbjct: 284 RNSSNSNRLREIGTQMGKPSYLIDDASGLDPA-----------------WL-DGVATVAV 325
Query: 310 TSGASTPDKAVEDVLKKVFEIKREEALQ 337
T+GAS P+ V D++ ++ + R E ++
Sbjct: 326 TAGASAPEGLVRDLVNRLRDFGRVEVVE 353
>gi|403527999|ref|YP_006662886.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Arthrobacter
sp. Rue61a]
gi|403230426|gb|AFR29848.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase IspH
[Arthrobacter sp. Rue61a]
Length = 361
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 142/324 (43%), Gaps = 63/324 (19%)
Query: 2 AFIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVL 61
A IA E + +++ +I+HN V LEE I VEE D V +G +V+
Sbjct: 50 AVIAVEKALEHYGPPVYVRKQIVHNVHVVSSLEEQGA--IFVEE----TDEVPEGALVIF 103
Query: 62 PAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATA 121
A G + + + ++ ++ +D TCP V+KV + K DY ++ G HEE TA
Sbjct: 104 SAHGVSPAVVQSAEDRGLRTIDATCPLVTKVHKEAVRFAKEDYDILLIGHEGHEEVEGTA 163
Query: 122 SFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGI 181
A ++I + +NG +VD V V
Sbjct: 164 GEAPEHIQI-----------------INGPH--------------------EVDKVTVRD 186
Query: 182 ANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKV 241
+T L T + + +E + K + + + IC AT RQ A+ K + +
Sbjct: 187 PEKTIWLSQTTLSVDETMETVRLLKDRFPTLQDP--PSDDICYATTNRQVAI-KKIAPQA 243
Query: 242 DLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLP 301
DL++VVG NSSN+ L E+A + G S + R+ N++ E+W
Sbjct: 244 DLVIVVGSANSSNSVRLVEVALEYGAKSSY-----RVDFANEV-----------DESWF- 286
Query: 302 KGQITIGITSGASTPDKAVEDVLK 325
+G T+G+TSGAS P+ V+DVL+
Sbjct: 287 EGVATVGVTSGASVPEVLVKDVLR 310
>gi|451812267|ref|YP_007448721.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Candidatus
Kinetoplastibacterium galatii TCC219]
gi|451778169|gb|AGF49117.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Candidatus
Kinetoplastibacterium galatii TCC219]
Length = 316
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 139/311 (44%), Gaps = 68/311 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVN--KGDVVVLPAFGAAVEEMVTL 74
+++ +EI+HN V ++ V + +++N G+V++ A G + + +
Sbjct: 42 VYVNHEIVHNKHVIDYFKDKGVIFVD--------NIINVPDGNVIIFSAHGVSKDMIAIA 93
Query: 75 NNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMK 134
N K ++IVD TCP V+KV V K ++ + II G H E T
Sbjct: 94 NKKKLRIVDATCPLVTKVHLEVLKMRRENREVIIIGHKDHPEVNGT-------------- 139
Query: 135 EAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEE 194
LG +++G ++ + VS+ D +L+ G QTT+ +
Sbjct: 140 ---------LGQDVSG------IYVVENISDVSRLSINDSELL--GYVTQTTLSLDDISC 182
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
I + + + G + + IC ATQ RQ+A+ K + + DL+LVVG NSSN
Sbjct: 183 IEEALRNRFPKIVGPKK--------SDICYATQNRQNAL-KYIVKDCDLVLVVGSNNSSN 233
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
++ L E+A G+ SY ID I +WL G+ IGITSGAS
Sbjct: 234 STRLLELARRGGVESYLIDGFDSI-----------------DLSWL-NGKKHIGITSGAS 275
Query: 315 TPDKAVEDVLK 325
P+ VE V++
Sbjct: 276 APEIIVEQVIE 286
>gi|386750258|ref|YP_006223465.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
cetorum MIT 00-7128]
gi|384556501|gb|AFI04835.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Helicobacter
cetorum MIT 00-7128]
Length = 274
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 137/313 (43%), Gaps = 67/313 (21%)
Query: 15 EKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTL 74
E I +IHN RLE+ N+ +EE K+ ++K V++ G +++ L
Sbjct: 26 ENSLIFGSLIHNAKEINRLEKNF--NVKIEEDPKK---ISKDKSVIIRTHGIPKQDLEYL 80
Query: 75 NNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMK 134
+K ++I D TCP+V K VE K Y ++ G +H E S++ +
Sbjct: 81 KSKGIKITDATCPYVIKPQQIVESMSKEGYQIVLFGDINHPEVKGVISYSTSETLA---- 136
Query: 135 EAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEE 194
+N +E L+K KV + +QTT ++
Sbjct: 137 -------------INSLEELQEKKLQK----------------KVALVSQTT------KQ 161
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
KL++ + + +E E I FNTIC+AT Q A + +E VD+++VVGG SSN
Sbjct: 162 TPKLLQ---IASYLIERCPEVRI-FNTICNATSHNQKAALDLSKE-VDIMIVVGGKTSSN 216
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
T L IA+ SY ++ E + + W KG+ GIT+GAS
Sbjct: 217 TKQLLNIAKQHCKDSYLVEDENEL-----------------EIEWF-KGKKLCGITAGAS 258
Query: 315 TPDKAVEDVLKKV 327
TPD +E V +K+
Sbjct: 259 TPDWIIEKVKQKI 271
>gi|336434826|ref|ZP_08614546.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Lachnospiraceae
bacterium 1_4_56FAA]
gi|336003536|gb|EGN33619.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Lachnospiraceae
bacterium 1_4_56FAA]
Length = 284
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 139/324 (42%), Gaps = 68/324 (20%)
Query: 6 YEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFG 65
YE + E I+ IIHN V K LE+ V + EE + D VV++ + G
Sbjct: 23 YEQIEAHKGEAIYTYGPIIHNDEVIKDLEKKGVTVLRTEEELEHLD----AGVVIIRSHG 78
Query: 66 AAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAG 125
LN K + IVD TCP+V K+ VEK + +I G +H E +AG
Sbjct: 79 VEKRIYEKLNEKGITIVDATCPFVKKIHQIVEKESALGHEIVIIGNPAHPEVQGIRGWAG 138
Query: 126 KYI-IVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQ 184
++ +V+N +EA+ K + G KV + +Q
Sbjct: 139 AHVSVVQNKEEAD-------------------------KFSAEGG-------AKVCVVSQ 166
Query: 185 TTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLI 244
TT + LVE + + + NV NTIC+AT+ERQ A + + E VD +
Sbjct: 167 TTF---NYNKFKDLVEIISEKSYDI-NV------LNTICNATKERQ-AEAREIAESVDAM 215
Query: 245 LVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQ 304
+V+G SSNT L EI +Y+I + ++ N G
Sbjct: 216 IVIGDKQSSNTQKLFEICAKACNDTYYIQT-------------------LDDLNVNQLGS 256
Query: 305 I-TIGITSGASTPDKAVEDVLKKV 327
+ T+GIT+GASTP+ +E+V V
Sbjct: 257 VETVGITAGASTPNNIIEEVQNNV 280
>gi|121600321|ref|YP_993941.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
mallei SAVP1]
gi|126451397|ref|YP_001081628.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
mallei NCTC 10247]
gi|238562656|ref|ZP_00440034.2| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
mallei GB8 horse 4]
gi|251766712|ref|ZP_02264767.2| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
mallei PRL-20]
gi|121229131|gb|ABM51649.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia mallei
SAVP1]
gi|126244267|gb|ABO07360.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
mallei NCTC 10247]
gi|238522149|gb|EEP85595.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
mallei GB8 horse 4]
gi|243064996|gb|EES47182.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
mallei PRL-20]
Length = 320
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 143/316 (45%), Gaps = 68/316 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V + L++ I VEE + V G+ V+ A G +
Sbjct: 42 IYVRHEIVHNKYVVEDLKKKGA--IFVEE----LEEVPSGNTVIFSAHGVSKAVRDEAAV 95
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ ++I D TCP V+KV V K ++ ++ G H E T + + M
Sbjct: 96 RGLRIYDATCPLVTKVHVEVAKMRQEGVDIVMIGHKGHPEVEGTMGQ-----VERGMHLV 150
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTM-LKGETEEI 195
E V D V + PD + +V + QTT+ + E I
Sbjct: 151 ESVED------------------------VRRLELPDPE--RVALVTQTTLSVDDAAEII 184
Query: 196 GKLVEK-TMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
G L K +R+ ++ IC ATQ RQDA+ K + + D+++VVG NSSN
Sbjct: 185 GALKAKFPAIREPKKQD----------ICYATQNRQDAV-KFMAPQCDVVIVVGSPNSSN 233
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
+S L+E+AE RG+ +Y +D+ ++I P W+ G+ IG+T+GAS
Sbjct: 234 SSRLREVAEKRGVAAYMVDAPEQIDPA-----------------WV-AGKRRIGVTAGAS 275
Query: 315 TPDKAVEDVLKKVFEI 330
P+ + V+ ++ E+
Sbjct: 276 APEVLAQAVIARLREL 291
>gi|297617653|ref|YP_003702812.1| hydroxymethylbutenyl pyrophosphate reductase [Syntrophothermus
lipocalidus DSM 12680]
gi|297145490|gb|ADI02247.1| hydroxymethylbutenyl pyrophosphate reductase [Syntrophothermus
lipocalidus DSM 12680]
Length = 646
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 142/328 (43%), Gaps = 70/328 (21%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
+A EA +Q K + ++HN V L E + I V E D V G V+V+ +
Sbjct: 3 VALEASRQGG--KCYSLGPLVHNDAVVAYLCE---KGIAVAE---TLDEVETGSVIVIRS 54
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
G + + + +++ D TCP V +V + + ++ Y ++ G +H E + +
Sbjct: 55 HGVSPRVLEEARLRGLRVFDATCPLVGRVQSLARQLREEGYELVVFGDRTHPEVLGILGW 114
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
G+ V GS +F AV K +G+
Sbjct: 115 VGEKATV------------------IGSPEEARSF-----AAVKK----------LGVVA 141
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTT ++EE V ++ K FNT+C+AT++RQ A ++ KVD+
Sbjct: 142 QTT----KSEEDFYSVAAELLPK------GREIRVFNTVCEATKKRQQAALELCG-KVDI 190
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++VVG SSNT L + + G+ + ++S + + P +W P G
Sbjct: 191 MIVVGDKKSSNTRTLATMCQRTGVKTIQVESARDLSP-----------------DWFPAG 233
Query: 304 QITIGITSGASTPDKAVEDVLKKVFEIK 331
+G+T+GASTPD +++VL K+ E +
Sbjct: 234 -CRVGVTAGASTPDWIIKEVLDKMVEFE 260
>gi|171057384|ref|YP_001789733.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Leptothrix
cholodnii SP-6]
gi|170774829|gb|ACB32968.1| hydroxymethylbutenyl pyrophosphate reductase [Leptothrix cholodnii
SP-6]
Length = 327
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 135/311 (43%), Gaps = 64/311 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V L+ A I +E+ + V G +V A G +
Sbjct: 42 IYVRHEIVHNTYVVNDLK--AKGAIFIEDLAE----VPPGATLVFSAHGVSQAVRAEATE 95
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ QI D TCP V+KV V K ++ Y I+ G H E T
Sbjct: 96 RGFQIFDATCPLVTKVHVEVAKMRREGYEFIMIGHKGHPEVEGTM--------------- 140
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
G+L+ E + + ++ DP ++ + QTT+ + EI
Sbjct: 141 ---------GQLDSGIHLVEDVADVAQVQLA---DPS----RLAVVTQTTLSVDDAAEIL 184
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
V K V E IC ATQ RQDA+ K++ +VD+++VVG SSN++
Sbjct: 185 AAV------KARFPQVREP--KQQDICYATQNRQDAV-KLLSAEVDVLIVVGSPTSSNSN 235
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L+E+AE RG P+Y +D+ + + W G+ +G+T+GAS P
Sbjct: 236 RLREVAERRGTPAYMVDNADEL-----------------QGAWF-DGRARVGLTAGASAP 277
Query: 317 DKAVEDVLKKV 327
+ V+ V++++
Sbjct: 278 ELLVQQVIERL 288
>gi|372490099|ref|YP_005029664.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Dechlorosoma suillum PS]
gi|359356652|gb|AEV27823.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Dechlorosoma suillum PS]
Length = 309
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 133/322 (41%), Gaps = 85/322 (26%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L A + VEE D V G V+ A G A +
Sbjct: 33 IYVRHEVVHNKFVVDGLR--AKGAVFVEE----LDEVPAGATVIFSAHGVAKAVREEADR 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V K ++ I+ G H E T
Sbjct: 87 RGLKVFDATCPLVTKVHNEVAKMREQGREVIMIGHKGHPEVEGT---------------- 130
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKV------GIANQTTMLKG 190
+G +NG E DVD + V G QTT+
Sbjct: 131 -------MGQSVNGGMHLVET-------------REDVDQLMVRFPEQLGFVTQTTLSVD 170
Query: 191 ETEEI-----GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLIL 245
+ + G+ + RK + IC ATQ RQDA+ K + E DL++
Sbjct: 171 DAANVIQAIRGRFPDAAGPRK-------------DDICYATQNRQDAV-KHLAESCDLVI 216
Query: 246 VVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQI 305
VVG NSSN++ L E+A+ RG+ Y +D ++I + WL +G
Sbjct: 217 VVGSRNSSNSNRLLEVAKLRGVRGYLVDGAEQI-----------------EAEWL-QGVS 258
Query: 306 TIGITSGASTPDKAVEDVLKKV 327
TIG+T+GAS P+ V+ V+ ++
Sbjct: 259 TIGVTAGASAPETLVQGVISRL 280
>gi|94313096|ref|YP_586305.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Cupriavidus
metallidurans CH34]
gi|93356948|gb|ABF11036.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Cupriavidus
metallidurans CH34]
Length = 332
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 131/315 (41%), Gaps = 66/315 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V + L + + + ++ D V V + A G + + +
Sbjct: 33 VYVRHEIVHNKHVVESLRQKGARFV------EELDEVPGNAVTIFSAHGVSRDVVSEAAR 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKE 135
+ + +D TCP V KV ++ ++ G H E T GK I+V+N E
Sbjct: 87 RELHAIDATCPLVIKVHNQGRQYAAAGRHVVLIGHAGHPEVEGTMGQIPGKVILVQN--E 144
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
A+ A L+ A V QTT+ +T
Sbjct: 145 ADV------------------ATLDLPNDA------------PVAYITQTTLSVDDT--- 171
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
+ ++ G N S IC ATQ RQ A+ ++ +VD+ILV+G NSSN+
Sbjct: 172 -----RNIIAALGARFTNLVGPSTRDICYATQNRQSAVREL-STRVDVILVIGATNSSNS 225
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L+EI + G+PSY I + P W+ + +GIT+GAS
Sbjct: 226 NRLREIGTESGVPSYLIADGSELDP-----------------TWV-RDAAVVGITAGASA 267
Query: 316 PDKAVEDVLKKVFEI 330
P++ VEDV+ + +
Sbjct: 268 PEEMVEDVIAALRRL 282
>gi|358636226|dbj|BAL23523.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Azoarcus sp.
KH32C]
Length = 311
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 140/320 (43%), Gaps = 76/320 (23%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L A + VEE D V G V+ A G +
Sbjct: 36 IYVRHEVVHNKFVVEGLR--AKGAVFVEE----LDEVPTGSTVIFSAHGVPQTVRLEAEK 89
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V + ++ ++ G H E T
Sbjct: 90 RGLRVFDATCPLVTKVHIEVGRMREQGREIVMIGHKGHPEVEGTM--------------- 134
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKK-AVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
G +EK + A+ DPD K+ QTT+ ++
Sbjct: 135 -------------GQVKDGIHLVEKVEDVAMLNVADPD----KLAYVTQTTL---SIDDA 174
Query: 196 GKLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGGW 250
LV T +R E F + + IC ATQ RQDA+ K + +VD++ VVG
Sbjct: 175 AALV--TALR--------ERFPNIIGPKKDDICYATQNRQDAV-KFMTPQVDVVFVVGSR 223
Query: 251 NSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGIT 310
NSSN++ L+E+AE RG+P+Y ID+ + I P + +G+ IG+T
Sbjct: 224 NSSNSNRLREVAELRGVPAYLIDNAEGIDPA------------------MLEGRKRIGVT 265
Query: 311 SGASTPDKAVEDVLKKVFEI 330
+GAS P+ V+ V+ ++ ++
Sbjct: 266 AGASAPEVLVDAVIDRLKQL 285
>gi|392953666|ref|ZP_10319220.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Hydrocarboniphaga effusa AP103]
gi|391859181|gb|EIT69710.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Hydrocarboniphaga effusa AP103]
Length = 319
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 144/323 (44%), Gaps = 60/323 (18%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L + VEE D V +G V + A G + + +
Sbjct: 33 IYVRHEVVHNRFVVESLRNKGA--VFVEE----VDQVPEGAVCIFSAHGVSQQVRQDASA 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ + + D TCP V+KV V+++ + ++ G H E T G++
Sbjct: 87 RKLTVFDATCPLVTKVHIEVKRYSREGREVVLIGHAGHPEVEGTM---GQF--------- 134
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
D GG ++ + + +K + QTT+ ++
Sbjct: 135 ----DESQGGRIHLVETPDDVQTLPIRKPEHMAY-----------VTQTTL---SMDDTA 176
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
++++ R + + + IC ATQ RQD++ K + + D++LVVG NSSN++
Sbjct: 177 RVIDALRARFPMISGPRK-----DDICYATQNRQDSV-KDLAAQCDVLLVVGSRNSSNSN 230
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L+E+AE RG P++ ID I P W+ G++ +G+T+GAS P
Sbjct: 231 RLRELAESRGTPAWLIDGPDDIQP-----------------EWM-NGKLRVGVTAGASAP 272
Query: 317 DKAVEDVLKKVFEIKREEALQLA 339
+ V+ V+ ++ E+ A +LA
Sbjct: 273 EVLVQQVVGRLKELGGSVAKELA 295
>gi|126454143|ref|YP_001065267.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 1106a]
gi|167844671|ref|ZP_02470179.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei B7210]
gi|167893200|ref|ZP_02480602.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 7894]
gi|167917925|ref|ZP_02505016.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei BCC215]
gi|242314313|ref|ZP_04813329.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 1106b]
gi|403517637|ref|YP_006651770.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei BPC006]
gi|126227785|gb|ABN91325.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 1106a]
gi|242137552|gb|EES23954.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 1106b]
gi|403073280|gb|AFR14860.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei BPC006]
Length = 326
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 143/316 (45%), Gaps = 68/316 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V + L++ I VEE + V G+ V+ A G +
Sbjct: 48 IYVRHEIVHNKYVVEDLKKKGA--IFVEE----LEEVPSGNTVIFSAHGVSKAVRDEAAV 101
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ ++I D TCP V+KV V K ++ ++ G H E T + + M
Sbjct: 102 RGLRIYDATCPLVTKVHVEVAKMRQEGVDIVMIGHKGHPEVEGTMGQ-----VERGMHLV 156
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTM-LKGETEEI 195
E V D V + PD + +V + QTT+ + E I
Sbjct: 157 ESVED------------------------VRRLELPDPE--RVALVTQTTLSVDDAAEII 190
Query: 196 GKLVEK-TMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
G L K +R+ ++ IC ATQ RQDA+ K + + D+++VVG NSSN
Sbjct: 191 GALRAKFPAIREPKKQD----------ICYATQNRQDAV-KFMAPQCDVVIVVGSPNSSN 239
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
+S L+E+AE RG+ +Y +D+ ++I P W+ G+ IG+T+GAS
Sbjct: 240 SSRLREVAEKRGVAAYMVDAPEQIDPA-----------------WV-AGKRRIGVTAGAS 281
Query: 315 TPDKAVEDVLKKVFEI 330
P+ + V+ ++ E+
Sbjct: 282 APEVLAQAVIARLREL 297
>gi|374986915|ref|YP_004962410.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Streptomyces
bingchenggensis BCW-1]
gi|297157567|gb|ADI07279.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Streptomyces
bingchenggensis BCW-1]
Length = 333
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 141/329 (42%), Gaps = 73/329 (22%)
Query: 2 AFIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVL 61
A IA E + I++ EI+HN V + LE+ I V+E ++ V +G +V+
Sbjct: 24 AVIAVEKALEQYGAPIYVRKEIVHNKYVVQTLEKKGA--IFVDETEE----VPEGSIVIF 77
Query: 62 PAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATA 121
A G A + + +D TCP V+KV + K DY ++ G HEE + T+
Sbjct: 78 SAHGVAPVVHEEARQRRLATIDATCPLVTKVHKEAVRFAKEDYDILLIGHEGHEEVIGTS 137
Query: 122 SFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGI 181
A +I + ++G + L D KV
Sbjct: 138 GEAPDHITL-----------------VDGPGDVENVQLR--------------DESKVVW 166
Query: 182 ANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKM 236
+QTT+ ET E V+ + E F + + IC ATQ RQ A+ K
Sbjct: 167 LSQTTLSVDETMET-------------VDALKERFPALISPPSDDICYATQNRQTAI-KQ 212
Query: 237 VEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEK 296
V + DL++VVG NSSN+ L E+A +G G K + + ++
Sbjct: 213 VAAEADLVIVVGSKNSSNSVRLVEVA---------------LGAGAKTGHLVDFASEID- 256
Query: 297 ENWLPKGQITIGITSGASTPDKAVEDVLK 325
E WL +G T+G+TSGAS PD VE VL+
Sbjct: 257 EAWL-EGVTTVGVTSGASVPDVLVEGVLE 284
>gi|284989586|ref|YP_003408140.1| hydroxymethylbutenyl pyrophosphate reductase [Geodermatophilus
obscurus DSM 43160]
gi|284062831|gb|ADB73769.1| hydroxymethylbutenyl pyrophosphate reductase [Geodermatophilus
obscurus DSM 43160]
Length = 324
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 139/324 (42%), Gaps = 65/324 (20%)
Query: 2 AFIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVL 61
A +A E + +++ +I+HN V LE + + D V +G VVV
Sbjct: 23 AVVAVERALEIHGAPVYVRKQIVHNKHVVATLERRGAVFV------DETDEVPEGSVVVF 76
Query: 62 PAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATA 121
A G + + ++ +D TCP V+KV ++ + DY ++ G HEE T+
Sbjct: 77 SAHGVSPTVHAEAAARQLRTIDATCPLVTKVHQEAKRFARDDYDILLIGHRGHEEVEGTS 136
Query: 122 SFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGI 181
A +I + + AE V D + DP+ KV
Sbjct: 137 GEAPDHI--QLVDGAEDVADVQV-------------------------RDPE----KVVW 165
Query: 182 ANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKV 241
+QTT+ +E V++ R G+++ + IC ATQ RQ A+ +M E
Sbjct: 166 LSQTTL---SVDETLATVDQLKTRFPGLQSPPS-----DDICYATQNRQQAVKQMAAE-C 216
Query: 242 DLILVVGGWNSSNTSHLQEIAEDRGI-PSYWIDSEKRIGPGNKIAYKLMHGELVEKENWL 300
DL++VVG NSSN+ L E+A + G SY +D I P WL
Sbjct: 217 DLVIVVGSTNSSNSVRLVEVALEAGARASYLVDFASEIDPA-----------------WL 259
Query: 301 PKGQITIGITSGASTPDKAVEDVL 324
+G T+G+TSGAS P+ V +VL
Sbjct: 260 -EGVGTVGVTSGASVPEVLVGEVL 282
>gi|253681777|ref|ZP_04862574.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
botulinum D str. 1873]
gi|253561489|gb|EES90941.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
botulinum D str. 1873]
Length = 633
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 147/330 (44%), Gaps = 69/330 (20%)
Query: 5 AYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAF 64
A +R+++ + I+ +IHN V K L+ + +I +E+ D + + DV+V+ +
Sbjct: 22 ALNSREKY-NKPIYTLGPLIHNNDVVKFLKSKDINSIELED----LDNLKENDVIVIRSH 76
Query: 65 GAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA 124
G + L K I D TCP+V+ + V+K+ + Y +I G +H E + +
Sbjct: 77 GITPKVFDILKEKKFIIADATCPYVAHIHERVKKYYELGYKIVIVGDSNHPEVIGINGYC 136
Query: 125 GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQ 184
I+ G + KV I Q
Sbjct: 137 NDTAIIS-----------------------------------KDGLNISKLPAKVCIVAQ 161
Query: 185 TTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLI 244
TT + E K+ EK ++ + + I+FNTIC+AT+ RQ+A ++ + VD +
Sbjct: 162 TT---EKQENFQKVTEK-------IKPLCDELITFNTICNATKIRQEAA-SILSQNVDTM 210
Query: 245 LVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQ 304
+V+GG++SSNT+ L EI ++ + I++ K+I EL+ N
Sbjct: 211 VVIGGFHSSNTTKLFEICKNNCKNTIHIENVKQIPK-----------ELINSSN------ 253
Query: 305 ITIGITSGASTPDKAVEDVLKKVFEIKREE 334
IG+T+GASTPD +++ + K+ E E
Sbjct: 254 -NIGVTAGASTPDWIIKEAILKMSEYTNSE 282
>gi|219871471|ref|YP_002475846.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Haemophilus
parasuis SH0165]
gi|254806908|sp|B8F6E6.1|ISPH_HAEPS RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|219691675|gb|ACL32898.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Haemophilus
parasuis SH0165]
Length = 314
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 134/311 (43%), Gaps = 61/311 (19%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L+ A I VEE D V G +V+ A G +
Sbjct: 33 IYVRHEVVHNRFVVDGLK--AKGAIFVEE----LDEVPDGAIVIFSAHGVSQAVRHEAKR 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V + K +I+ G H E V T G+Y
Sbjct: 87 RELKVFDATCPLVTKVHMQVARASKKGTKAILIGHEGHPEVVGT---MGQY--------- 134
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
D GG +E + G D DL QTT+ +T ++
Sbjct: 135 ----DNEKGGIF---------LVEDVEDIAKLGLKEDEDLT---FMTQTTLSIDDTIDV- 177
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+E + ++ + N IC AT RQ A+ ++ + L+LVVG NSSN++
Sbjct: 178 --IEALKQKYPAIQGPRK-----NDICYATTNRQQAVRELA-KLAQLVLVVGSKNSSNSN 229
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L E+A G PS ID + I P NWL +G TIGIT+GAS P
Sbjct: 230 RLAELASRMGTPSQLIDGPQDIDP-----------------NWL-QGVTTIGITAGASAP 271
Query: 317 DKAVEDVLKKV 327
+ V+ V++ +
Sbjct: 272 EVLVQSVVEHL 282
>gi|83717856|ref|YP_440431.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
thailandensis E264]
gi|167579084|ref|ZP_02371958.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
thailandensis TXDOH]
gi|167617197|ref|ZP_02385828.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
thailandensis Bt4]
gi|257141073|ref|ZP_05589335.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
thailandensis E264]
gi|83651681|gb|ABC35745.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
thailandensis E264]
Length = 313
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 136/312 (43%), Gaps = 66/312 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V + L + + ++ D V G V + A G A +
Sbjct: 33 VYVRHEIVHNRHVVENLRNKGARFV------EELDEVPHGAVAIFSAHGVAQTVEKDADA 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKE 135
+ + ++D TCP V+KV ++ I+ G H E T + I+V++ E
Sbjct: 87 RGLDVLDATCPLVTKVHVQGRQYVAAGRRLILIGHAGHPEVEGTIGQIPAEVILVQSEAE 146
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
+ L + T A++ QTT+ +T I
Sbjct: 147 VDT---------LTLPADTPVAYV-----------------------TQTTLSVDDTRGI 174
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
+ +++ G + + IC ATQ RQ A+ ++ E+VD++LVVG NSSN+
Sbjct: 175 IEALQRRFTDIVGPDTRD--------ICYATQNRQAAVREL-SEQVDVLLVVGATNSSNS 225
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L+EI + G+PSY + G++I + W + T+G+T+GAS
Sbjct: 226 NRLREIGTESGVPSYL------VADGSEI-----------RAEWFASAR-TVGLTAGASA 267
Query: 316 PDKAVEDVLKKV 327
P++ VEDV+ +
Sbjct: 268 PEEMVEDVIAAL 279
>gi|398986123|ref|ZP_10691394.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pseudomonas sp. GM24]
gi|399011802|ref|ZP_10714132.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pseudomonas sp. GM16]
gi|398117386|gb|EJM07138.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pseudomonas sp. GM16]
gi|398152911|gb|EJM41421.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pseudomonas sp. GM24]
Length = 314
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 135/312 (43%), Gaps = 62/312 (19%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L I VEE D V +V+ A G +
Sbjct: 33 IYVRHEVVHNKFVVEDLRSRGA--IFVEE----LDQVPDDVIVIFSAHGVSQAVRTEAAG 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V K+ + I+ G H E T
Sbjct: 87 RGLKVFDATCPLVTKVHIEVAKYSRDGRECILIGHAGHPEVEGTM--------------- 131
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVS-KGFDPDVDLVKVGIANQTTMLKGETEEI 195
G+ +GS+ +E K + +PD K+ QTT+ +T +
Sbjct: 132 ---------GQYDGSNGGAIYLVEDEKDVAELQVHNPD----KLAFVTQTTLSMDDTSRV 178
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
+ +T G ++ IC ATQ RQDA+ ++ +E D++LVVG NSSN+
Sbjct: 179 IDAL-RTRFPAIGGPRKDD-------ICYATQNRQDAVKQLADE-CDVVLVVGSPNSSNS 229
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L+E+AE P+Y ID + + +++W G IGIT+GAS
Sbjct: 230 NRLRELAERMATPAYLIDGAEDL-----------------QKSWF-DGVERIGITAGASA 271
Query: 316 PDKAVEDVLKKV 327
P+ V V++++
Sbjct: 272 PEVLVRGVIQQL 283
>gi|197303561|ref|ZP_03168600.1| hypothetical protein RUMLAC_02283 [Ruminococcus lactaris ATCC
29176]
gi|197297559|gb|EDY32120.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ruminococcus
lactaris ATCC 29176]
Length = 284
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 140/323 (43%), Gaps = 66/323 (20%)
Query: 6 YEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFG 65
Y+ + +EKI+ IIHN V K +E+ V+ I EE K V++ + G
Sbjct: 23 YKCTETGTDEKIYTYGPIIHNEEVVKDMEKRGVRVIRSEEDLAAL----KEGTVIIRSHG 78
Query: 66 AAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAG 125
L K + IVD TCP+V K+ VEKH + II G H E +A
Sbjct: 79 VEKRVYEELEKKGIHIVDATCPFVKKIHKIVEKHSEQGDRIIIIGNPDHPEVQGIRGWAK 138
Query: 126 KYI-IVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQ 184
+ +++N++EAE F D K+ I Q
Sbjct: 139 SPVSVIRNVEEAE-------------------------------SFSCPADQ-KICIVAQ 166
Query: 185 TTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLI 244
TT + +E+ +++EK + + V NTIC+AT+ERQ + + E VD +
Sbjct: 167 TTFNYNKFKELVEIIEK---KSYDVS-------VLNTICNATKERQTEA-RSIAETVDAM 215
Query: 245 LVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQ 304
+V+G +SSNT L EI +Y+I + G+L N L +
Sbjct: 216 IVIGDKHSSNTQKLFEICRKACNNTYYIQT---------------LGDL--DLNQLGSVE 258
Query: 305 ITIGITSGASTPDKAVEDVLKKV 327
T+GIT+GASTP+ +E+V V
Sbjct: 259 -TVGITAGASTPNNIIEEVQNNV 280
>gi|397688389|ref|YP_006525708.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
stutzeri DSM 10701]
gi|395809945|gb|AFN79350.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
stutzeri DSM 10701]
Length = 314
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 134/318 (42%), Gaps = 70/318 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L E I V+E D V G +V+ A G + + +
Sbjct: 33 IYVRHEVVHNKFVVEDLRERGA--IFVDE----LDQVPDGFIVIFSAHGVSQAVRMEADK 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V K+ + I+ G + H E T G+Y
Sbjct: 87 RGLKVFDATCPLVTKVHLEVTKYSREGRECILIGHHGHPEVEGTM---GQY--------- 134
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
D GG + + + + S F QTT+ +T +
Sbjct: 135 ----DTANGGSIYLVEDEDDVAQLQVRNPESLAF-----------VTQTTLSMDDTSRV- 178
Query: 197 KLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGGWN 251
++ + F S + IC ATQ RQDA+ ++ E D++LVVG N
Sbjct: 179 ------------IDALRTRFPSIGGPRKDDICYATQNRQDAVKQLAGE-CDVVLVVGSPN 225
Query: 252 SSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITS 311
SSN++ L+E+AE P+Y ID + + K W + IGIT+
Sbjct: 226 SSNSNRLRELAERMDTPAYLIDGAEDL-----------------KREWFAEDS-RIGITA 267
Query: 312 GASTPDKAVEDVLKKVFE 329
GAS P+ V V+ ++ E
Sbjct: 268 GASAPEVLVRGVIDQLRE 285
>gi|269103422|ref|ZP_06156119.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Photobacterium
damselae subsp. damselae CIP 102761]
gi|268163320|gb|EEZ41816.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Photobacterium
damselae subsp. damselae CIP 102761]
Length = 315
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 135/315 (42%), Gaps = 67/315 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L++ I VEE V ++V+ A G +
Sbjct: 33 IYVRHEVVHNRFVVEGLKQRGA--IFVEE----LSEVPDDNIVIFSAHGVSQAVRNEAKA 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT----ASFAGKYIIVKN 132
+ + + D TCP V+KV V + + ++ G H E T +S G +V+N
Sbjct: 87 RQLTVFDATCPLVTKVHMEVARASRKHMEVVLIGHAGHPEVEGTMGQYSSDEGGMYLVEN 146
Query: 133 MKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGET 192
+ + A +K K DP + +QTT+ ET
Sbjct: 147 PDDVQ-------------------ALRDKVK-------DPS----NLHFVSQTTLSVDET 176
Query: 193 EEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNS 252
++ + + G + IC ATQ RQDA+ +M + VD+++VVG NS
Sbjct: 177 SDVINTLRQVFPAIQGPRK--------DDICYATQNRQDAVREMAK-NVDVMIVVGSKNS 227
Query: 253 SNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSG 312
SN++ L+E+AE G P Y D I P NWL Q T+G+T+G
Sbjct: 228 SNSNRLRELAEKLGTPGYLTDCADDIDP-----------------NWLSDVQ-TVGVTAG 269
Query: 313 ASTPDKAVEDVLKKV 327
AS P++ V ++ ++
Sbjct: 270 ASAPEELVNQIIARI 284
>gi|53718560|ref|YP_107546.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei K96243]
gi|53726243|ref|YP_103792.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
mallei ATCC 23344]
gi|76811645|ref|YP_332553.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 1710b]
gi|124385365|ref|YP_001027005.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
mallei NCTC 10229]
gi|126440135|ref|YP_001058032.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 668]
gi|134281185|ref|ZP_01767894.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 305]
gi|167718471|ref|ZP_02401707.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei DM98]
gi|167814640|ref|ZP_02446320.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 91]
gi|167901653|ref|ZP_02488858.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei NCTC 13177]
gi|167909903|ref|ZP_02496994.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 112]
gi|217419957|ref|ZP_03451463.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 576]
gi|237811183|ref|YP_002895634.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei MSHR346]
gi|254175695|ref|ZP_04882355.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia mallei
ATCC 10399]
gi|254181482|ref|ZP_04888079.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 1655]
gi|254190870|ref|ZP_04897377.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei Pasteur 52237]
gi|254197014|ref|ZP_04903438.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei S13]
gi|254202494|ref|ZP_04908857.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia mallei
FMH]
gi|254207829|ref|ZP_04914179.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia mallei
JHU]
gi|254260782|ref|ZP_04951836.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 1710a]
gi|254356276|ref|ZP_04972552.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia mallei
2002721280]
gi|418390152|ref|ZP_12967949.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 354a]
gi|418541738|ref|ZP_13107206.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 1258a]
gi|418548065|ref|ZP_13113191.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 1258b]
gi|418554178|ref|ZP_13118974.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 354e]
gi|71152165|sp|Q63WH0.1|ISPH1_BURPS RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1
gi|71152166|sp|Q62HM8.1|ISPH2_BURMA RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2
gi|52208974|emb|CAH34913.1| LytB protein [Burkholderia pseudomallei K96243]
gi|52429666|gb|AAU50259.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia mallei
ATCC 23344]
gi|76581098|gb|ABA50573.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 1710b]
gi|124293385|gb|ABN02654.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
mallei NCTC 10229]
gi|126219628|gb|ABN83134.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 668]
gi|134247491|gb|EBA47576.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 305]
gi|147746741|gb|EDK53818.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia mallei
FMH]
gi|147751723|gb|EDK58790.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia mallei
JHU]
gi|148025273|gb|EDK83427.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia mallei
2002721280]
gi|157938545|gb|EDO94215.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei Pasteur 52237]
gi|160696739|gb|EDP86709.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia mallei
ATCC 10399]
gi|169653757|gb|EDS86450.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei S13]
gi|184212020|gb|EDU09063.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 1655]
gi|217397261|gb|EEC37277.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 576]
gi|237504263|gb|ACQ96581.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei MSHR346]
gi|254219471|gb|EET08855.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 1710a]
gi|385357170|gb|EIF63241.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 1258a]
gi|385358729|gb|EIF64713.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 1258b]
gi|385370672|gb|EIF75906.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 354e]
gi|385375646|gb|EIF80402.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 354a]
Length = 326
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 143/316 (45%), Gaps = 68/316 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V + L++ I VEE + V G+ V+ A G +
Sbjct: 48 IYVRHEIVHNKYVVEDLKKKGA--IFVEE----LEEVPSGNTVIFSAHGVSKAVRDEAAV 101
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ ++I D TCP V+KV V K ++ ++ G H E T + + M
Sbjct: 102 RGLRIYDATCPLVTKVHVEVAKMRQEGVDIVMIGHKGHPEVEGTMGQ-----VERGMHLV 156
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTM-LKGETEEI 195
E V D V + PD + +V + QTT+ + E I
Sbjct: 157 ESVED------------------------VRRLELPDPE--RVALVTQTTLSVDDAAEII 190
Query: 196 GKLVEK-TMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
G L K +R+ ++ IC ATQ RQDA+ K + + D+++VVG NSSN
Sbjct: 191 GALKAKFPAIREPKKQD----------ICYATQNRQDAV-KFMAPQCDVVIVVGSPNSSN 239
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
+S L+E+AE RG+ +Y +D+ ++I P W+ G+ IG+T+GAS
Sbjct: 240 SSRLREVAEKRGVAAYMVDAPEQIDPA-----------------WV-AGKRRIGVTAGAS 281
Query: 315 TPDKAVEDVLKKVFEI 330
P+ + V+ ++ E+
Sbjct: 282 APEVLAQAVIARLREL 297
>gi|221633148|ref|YP_002522373.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Thermomicrobium
roseum DSM 5159]
gi|221155833|gb|ACM04960.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Thermomicrobium
roseum DSM 5159]
Length = 327
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 130/319 (40%), Gaps = 56/319 (17%)
Query: 14 EEKIWITNEIIHNPTVNKRLEEMAVQNI--PVEEGKKQFDVVNKGDVVVLPAFGAAVEEM 71
E + +IIHNP V ++L V + PVE + D V + A GA
Sbjct: 42 ERPVAALGDIIHNPIVVEQLTREGVLPVTDPVEAKRHGLDRV------AITAHGAPPTRY 95
Query: 72 VTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVK 131
+ +++++DTTCP V+KV +K Y +++G H E +AG
Sbjct: 96 QEASVYDLEVIDTTCPLVTKVQRLAQKLALQGYFLVVYGDAQHPEVRGVLGWAGT----- 150
Query: 132 NMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGE 191
E C +L ++ + KV + QTT E
Sbjct: 151 -----ERACAAKSFDDLPWDGPRGTGAMQPPPR-------------KVALIAQTTKRTDE 192
Query: 192 TEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWN 251
+ + ++ G V NTIC T ERQ+A+ ++ VDL+LV+GG
Sbjct: 193 FTAFAQALAAWVLPHGGELRV------VNTICQPTWERQEALARLAR-TVDLVLVIGGRK 245
Query: 252 SSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITS 311
SSN++ L E++ G PS ++ ++ P + +GIT+
Sbjct: 246 SSNSARLVEVSRSLGTPSVLVERPDQLDPALFAPVR------------------RVGITA 287
Query: 312 GASTPDKAVEDVLKKVFEI 330
GASTPD+ + V++++ +
Sbjct: 288 GASTPDEVILAVIEELVRL 306
>gi|253997644|ref|YP_003049708.1| hydroxymethylbutenyl pyrophosphate reductase [Methylotenera mobilis
JLW8]
gi|253984323|gb|ACT49181.1| hydroxymethylbutenyl pyrophosphate reductase [Methylotenera mobilis
JLW8]
Length = 337
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 141/312 (45%), Gaps = 60/312 (19%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L A + VEE D + G +V+ A G + +
Sbjct: 51 IYVRHEVVHNKFVVDELR--AKGAVFVEE----LDEIPTGSIVIFSAHGVSKAVRAEAES 104
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ + D TCP V+KV VEK +K ++ G H E T M +
Sbjct: 105 RGLTAYDATCPLVTKVHIEVEKMRKAGMEIVMIGHKGHPEVEGT------------MGQV 152
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGF-DPDVDLVKVGIANQTTMLKGETEEI 195
E G+S+T +E + + DP K+ QTT+ + +
Sbjct: 153 EQA----------GNSNTGMYLVETPEDVTALTVKDPS----KLAYVTQTTL----SMDD 194
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
LV + KF N + + IC ATQ RQDA+ K++ + DL+++VG NSSN+
Sbjct: 195 AALVINALKEKFPQVNAPKS----DDICYATQNRQDAV-KIMAQDCDLVIIVGSPNSSNS 249
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L+E+A+++GI +Y +D+ + P WL + +G+++GAS
Sbjct: 250 NRLREVAKNQGIEAYMVDNASYLKP-----------------EWLVNKK-KVGVSAGASA 291
Query: 316 PDKAVEDVLKKV 327
P+ V++V+ ++
Sbjct: 292 PEVLVQEVIAQL 303
>gi|254482802|ref|ZP_05096039.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [marine gamma
proteobacterium HTCC2148]
gi|214036883|gb|EEB77553.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [marine gamma
proteobacterium HTCC2148]
Length = 316
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 142/324 (43%), Gaps = 62/324 (19%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L A + V+E + V +V+ A G + +
Sbjct: 33 IYVRHEVVHNKFVVEDLR--ARGAVFVDE----LEEVPDDCIVIFSAHGVSQAVRKEADR 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V K+ ++ G H E T
Sbjct: 87 RQLKVFDATCPLVTKVHMEVAKYSAAGRECVLIGHAGHPEVEGTM--------------- 131
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
G+ N +S +E +A S D K+ QTT+ +T
Sbjct: 132 ---------GQYNRASGGDIYLVEDESQASSLNV---ADPGKLSYVTQTTLSMDDT---- 175
Query: 197 KLVEKTMMRKFG-VENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
LV + ++F +E + N IC ATQ RQDA+ K + DL+LVVG NSSN+
Sbjct: 176 ALVIDALRQRFPHIEGPRK-----NDICYATQNRQDAV-KQLAADCDLMLVVGSPNSSNS 229
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L+E+AE G ++ +D + I P W+ KG+ IG+T+GAS
Sbjct: 230 NRLRELAERMGAEAHLLDGAQDIDP-----------------RWV-KGKRRIGVTAGASA 271
Query: 316 PDKAVEDVLKKVFEIKREEALQLA 339
P+ V++V+ + + E +++A
Sbjct: 272 PEVLVQEVIDGLRALGAEAPIEVA 295
>gi|262066813|ref|ZP_06026425.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Fusobacterium
periodonticum ATCC 33693]
gi|291379479|gb|EFE86997.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Fusobacterium
periodonticum ATCC 33693]
Length = 827
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 143/310 (46%), Gaps = 61/310 (19%)
Query: 18 WITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNK 77
+I ++HN V + +E + + EE + D + + D+VV+ A G + + L +
Sbjct: 33 YILGMLVHNKQVVEDMERKGFKLVKEEELLEDIDDLKENDIVVVRAHGTSKKVHEKLKER 92
Query: 78 NVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAE 137
V++ D TC +V+K+ +E + Y + G +H E SFA I ++++EA
Sbjct: 93 KVKVYDATCVFVNKIRQEIEIANEKGYNILFMGDKNHPEVKGVISFADNIQIFESLEEAM 152
Query: 138 YVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGK 197
V D D + ++ QTT+ K + EE+
Sbjct: 153 EV-----------------------------KIDSDKTYL---LSTQTTLNKKKFEEV-- 178
Query: 198 LVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSH 257
+K+ EN ++ I F+ IC AT RQ A+ ++ K D++++VG SSNT
Sbjct: 179 -------KKYFKENY-QNVIIFDKICGATAVRQKAVEELAV-KADIVIIVGDTKSSNTKK 229
Query: 258 LQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPD 317
L EI++ SY +++E+++ + + +G+ IGIT+GASTP+
Sbjct: 230 LYEISKKLNSESYLVENEEQV------------------DLTIFRGKKVIGITAGASTPE 271
Query: 318 KAVEDVLKKV 327
+ + ++ KK+
Sbjct: 272 ETIMNIEKKI 281
>gi|28210997|ref|NP_781941.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
tetani E88]
gi|50401023|sp|Q895G2.1|ISPH_CLOTE RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|28203436|gb|AAO35878.1| conserved protein [Clostridium tetani E88]
Length = 635
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 148/329 (44%), Gaps = 68/329 (20%)
Query: 9 RKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAV 68
++ +P++ I+ +IHN V L+ + +I G + D + +GD+++L + G +
Sbjct: 26 KQNYPDKIIYTLGPLIHNNDVVDFLKTKNIFSI----GYENIDTLKEGDIIILRSHGVTL 81
Query: 69 EEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYI 128
E + L K + I+D TCP+VS + +K+ K Y+ +I G +H E + +
Sbjct: 82 ETIQKLKEKKLNIIDATCPYVSNIQKKAQKYYKEGYSILIVGDKNHPEVIGINGWCNNSA 141
Query: 129 IVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTML 188
I+ ++AE + D L K K+ + +QTT
Sbjct: 142 II--CRKAEEIED-----------------LPK----------------KICVVSQTTEK 166
Query: 189 KGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVG 248
K E + V N ++FNTIC+AT+ RQ + + +E VD ++V+G
Sbjct: 167 K----------EHWISVLSKVVNECREVVAFNTICNATEVRQLSAEDLSKE-VDFMIVIG 215
Query: 249 GWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIG 308
+SSNT+ L EI ++ + I++ GEL +++ IG
Sbjct: 216 SKSSSNTTKLYEICKNNCSNTIHIENA---------------GEL---PDYISNKYSKIG 257
Query: 309 ITSGASTPDKAVEDVLKKVFEIKREEALQ 337
+T+GASTPD +++ + K+ E L+
Sbjct: 258 VTAGASTPDWIIKEAIFKMSNKNLNEQLE 286
>gi|269797892|ref|YP_003311792.1| hydroxymethylbutenyl pyrophosphate reductase [Veillonella parvula
DSM 2008]
gi|269094521|gb|ACZ24512.1| hydroxymethylbutenyl pyrophosphate reductase [Veillonella parvula
DSM 2008]
Length = 632
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 135/310 (43%), Gaps = 69/310 (22%)
Query: 16 KIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLN 75
K + IIHNP V RLE+ V PV+E D+V ++ G A+ E
Sbjct: 31 KSYTLGPIIHNPQVVGRLEDKGVS--PVQEVS---DIVEGTMIIRSHGVGPAIYE--EAE 83
Query: 76 NKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKE 135
K + +VD TCP+V K + T +I G+ +H E + +A I+ +E
Sbjct: 84 EKGLHVVDATCPYVKKAQQDAKSVIDEGMTLVILGEKNHPEVKSINLWANNEGIIIEDEE 143
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
S+ K +EK G+ QTT + + I
Sbjct: 144 ----------------SAQKLQVVEKM-----------------GVVVQTTFSQFKFNSI 170
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
++EK +++ F TIC+ATQERQ++ + VDL++V+GG NS NT
Sbjct: 171 IDILEKK----------SKNLKVFKTICNATQERQNSAVDLAR-NVDLMIVIGGKNSGNT 219
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L E+ D G +Y I++ + + W + Q T+G+T+GAST
Sbjct: 220 NRLAEVCRDVGCATYHIETSTEL-----------------QLEWFNRVQ-TVGVTAGAST 261
Query: 316 PDKAVEDVLK 325
PD +++V++
Sbjct: 262 PDWIIKEVIE 271
>gi|262401616|ref|ZP_06078182.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio sp.
RC586]
gi|262352033|gb|EEZ01163.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio sp.
RC586]
Length = 316
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 140/318 (44%), Gaps = 67/318 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L++ + + ++ V ++V+ A G +
Sbjct: 33 IYVRHEVVHNRFVVEGLKQRGARFV------EELSEVPNDNIVIFSAHGVSQAVRQEAKE 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT----ASFAGKYIIVKN 132
+++ + D TCP V+KV V + + + ++ G H E T AS G +V+
Sbjct: 87 RSLTVFDATCPLVTKVHMEVARASRKNMEVVLIGHAGHPEVEGTMGQYASETGGMYLVEK 146
Query: 133 MKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGET 192
++ E N S K DP + +QTT+ ET
Sbjct: 147 PEDVE-----------NLQSQVK---------------DPS----NLHYVSQTTLSVDET 176
Query: 193 EEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNS 252
++ + + + G + IC ATQ RQDA+ +++ ++VD+++VVG NS
Sbjct: 177 ADVIDELRRVFPKIQGPRK--------DDICYATQNRQDAV-RILAQQVDVMVVVGSKNS 227
Query: 253 SNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSG 312
SN++ L+E+AE G P Y D + I P W ++ +G+T+G
Sbjct: 228 SNSTRLKELAEKLGTPGYLTDCPQDIHP-----------------EWFENARL-VGVTAG 269
Query: 313 ASTPDKAVEDVLKKVFEI 330
AS P++ V +L ++ E+
Sbjct: 270 ASAPEELVNQILDRIKEL 287
>gi|167737521|ref|ZP_02410295.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 14]
gi|167823108|ref|ZP_02454579.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 9]
gi|226194399|ref|ZP_03789997.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei Pakistan 9]
gi|386862662|ref|YP_006275611.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 1026b]
gi|418534411|ref|ZP_13100254.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 1026a]
gi|225933484|gb|EEH29473.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei Pakistan 9]
gi|385359313|gb|EIF65280.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 1026a]
gi|385659790|gb|AFI67213.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 1026b]
Length = 326
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 143/316 (45%), Gaps = 68/316 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V + L++ I VEE + V G+ V+ A G +
Sbjct: 48 IYVRHEIVHNKYVVEDLKKKGA--IFVEE----LEEVPSGNTVIFSAHGVSKAVRDEAAV 101
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ ++I D TCP V+KV V K ++ ++ G H E T + + M
Sbjct: 102 RGLRIYDATCPLVTKVHVEVAKMRQEGVDIVMIGHKGHPEVEGTMGQ-----VERGMHLV 156
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTM-LKGETEEI 195
E V D V + PD + +V + QTT+ + E I
Sbjct: 157 ESVED------------------------VRRLELPDPE--RVALVTQTTLSVDDAAEII 190
Query: 196 GKLVEK-TMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
G L K +R+ ++ IC ATQ RQDA+ K + + D+++VVG NSSN
Sbjct: 191 GALKAKFPAIREPKKQD----------ICYATQNRQDAV-KFMAPQCDVVIVVGSPNSSN 239
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
+S L+E+AE RG+ +Y +D+ ++I P W+ G+ IG+T+GAS
Sbjct: 240 SSRLREVAEKRGVAAYMVDAPEQIDPA-----------------WV-AGKRRIGVTAGAS 281
Query: 315 TPDKAVEDVLKKVFEI 330
P+ + V+ ++ E+
Sbjct: 282 APEVLAQAVIARLREL 297
>gi|422936138|ref|ZP_16966716.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Fusobacterium
nucleatum subsp. animalis ATCC 51191]
gi|339890849|gb|EGQ79915.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Fusobacterium
nucleatum subsp. animalis ATCC 51191]
Length = 714
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 143/313 (45%), Gaps = 63/313 (20%)
Query: 16 KIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLN 75
K +I ++HN V + ++ + + +E + D + +GD+VV+ A G + L
Sbjct: 31 KKYILGMLVHNKQVVEDMQRKGFKLVTEDELLEDMDELKEGDIVVIRAHGTSKSVHEKLK 90
Query: 76 NKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKE 135
+ V++ D TC +V+K+ +E + Y+ + G +H E SFA I ++ +E
Sbjct: 91 ERKVKVFDATCIFVNKIRQEIEIANEKGYSILFMGDRNHPEVKGVISFADDIQIFESYEE 150
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGI-ANQTTMLKGETEE 194
A + +DL K + + QTT+ K + EE
Sbjct: 151 ATRL---------------------------------KIDLDKTYLLSTQTTLNKRKFEE 177
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
+ +KF EN ++ I F+ IC AT RQ A+ + KV+L++VVG SSN
Sbjct: 178 V---------KKFFKENY-KNVIIFDKICGATAVRQKAVEDLAV-KVELMIVVGDTKSSN 226
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
T L EI++ +Y I++EK++ + G+ +GIT+GAS
Sbjct: 227 TKKLYEISKKLNDNTYLIENEKQLDLD------------------IFSGKKVVGITAGAS 268
Query: 315 TPDKAVEDVLKKV 327
TP++ + ++ KK+
Sbjct: 269 TPEETIMNIEKKI 281
>gi|313202262|ref|YP_004040920.1| hydroxymethylbutenyl pyrophosphate reductase [Methylovorus sp.
MP688]
gi|312441578|gb|ADQ85684.1| hydroxymethylbutenyl pyrophosphate reductase [Methylovorus sp.
MP688]
Length = 308
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 145/324 (44%), Gaps = 68/324 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L+ I ++ + V G+ V+ A G + E
Sbjct: 33 IYVRHEVVHNKFVVDELKRKGAVFI------EELEEVPPGNTVIFSAHGVSREVRTDAEA 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATA--SFAGKYIIVKNMK 134
+ +++ D TCP V+KV V K ++ ++ G H E T S G Y++ K
Sbjct: 87 RGLRVFDATCPLVTKVHNEVAKMRQDGKEIVMIGHKGHPEVEGTMGQSDGGMYLVEKP-- 144
Query: 135 EAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEE 194
E S K D K+ QTT+ ++
Sbjct: 145 ------------EDVDSLQVK-------------------DPAKLAYVTQTTL---SIDD 170
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
+V + KF + + + ++IC ATQ RQDA+ M ++ DL++VVG NSSN
Sbjct: 171 AASIV-TALKDKFPLISAPKS----DSICYATQNRQDAVKAMAKD-CDLVIVVGSPNSSN 224
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
++ L+E+A+++GI SY +D+ + +WL G+ IG+++GAS
Sbjct: 225 SNRLREVAQNQGIESYMVDNASYL-----------------NADWL-AGKKRIGVSAGAS 266
Query: 315 TPDKAVEDVLKKVFEIKREEALQL 338
P+ V++V++++ E+ E +L
Sbjct: 267 APEILVKEVIQRLQEMGAAEVTEL 290
>gi|399908663|ref|ZP_10777215.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Halomonas sp.
KM-1]
Length = 325
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 135/311 (43%), Gaps = 60/311 (19%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L I VEE D V +V+ A G +
Sbjct: 38 IYVRHEVVHNRFVVDTLRSRGA--IFVEE----LDEVPDDVIVIFSAHGVSRAVQEDAER 91
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V ++ K I+ G H E T G+Y
Sbjct: 92 RGLKVFDATCPLVTKVHMEVLRYAKRGQECILIGHAGHPEVEGTM---GRY--------- 139
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
D GG + ++ + K D ++ QTT+ +T
Sbjct: 140 ----DTTHGGAIYLVEDEEDVARLEVK-----------DPARLAFVTQTTLSMDDT---A 181
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
++++ + +E + + IC ATQ RQDA+ ++ +L+LVVG NSSN++
Sbjct: 182 RVIDALRAKFPEIEGPRK-----DDICYATQNRQDAVRELAA-GCELLLVVGSPNSSNSN 235
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L+E+AE G P+Y ID +I P WL +G +GIT+GAS P
Sbjct: 236 RLRELAERVGTPAYLIDDASQIDPA-----------------WL-QGVSAVGITAGASAP 277
Query: 317 DKAVEDVLKKV 327
+ V+ V++++
Sbjct: 278 EVLVKGVIERL 288
>gi|300869907|ref|YP_003784778.1| hydroxymethylbutenyl pyrophosphate reductase [Brachyspira
pilosicoli 95/1000]
gi|300687606|gb|ADK30277.1| hydroxymethylbutenyl pyrophosphate reductase [Brachyspira
pilosicoli 95/1000]
Length = 577
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 149/329 (45%), Gaps = 69/329 (20%)
Query: 4 IAYEARKQFPE-----EKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDV 58
+ Y K F + E+I++ +IHNP LE+ V+ E+ + V++ V
Sbjct: 15 VKYAVEKTFSQASKSNEEIYVDGHLIHNPQTLDMLEKTGVKT--YEDTEDDMSVLDDKTV 72
Query: 59 VVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETV 118
++ A G + E L++ +IV+ TC +V+K+ V+KH Y I+ G +H E +
Sbjct: 73 II-RAHGISPERREALSSHAKKIVNLTCKYVAKIQALVKKHSSLGYRVIVIGNPTHPEII 131
Query: 119 ATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVK 178
FA +V K+ +EK P+ D K
Sbjct: 132 GVCGFAQDVYVV-----------------------YKDEDIEKL---------PEDD-KK 158
Query: 179 VGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVE 238
I QTT+ K E K V + + K+ N I NTIC+AT++RQ+ + +
Sbjct: 159 TLIVAQTTLQK---ETFNKFVSQ-IQDKYK----NSELIIKNTICEATEQRQNEILD-IA 209
Query: 239 EKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKEN 298
++ D++LV+GG SSNT +L +IA PS++++ + E +EK +
Sbjct: 210 KRNDVVLVIGGSESSNTRNLYKIASSIK-PSFYVEFK----------------EDLEKID 252
Query: 299 WLPKGQITIGITSGASTPDKAVEDVLKKV 327
P +GI +GASTPD +ED+ + +
Sbjct: 253 LTPYKN--VGIMAGASTPDWLIEDIAQTI 279
>gi|406992366|gb|EKE11738.1| hypothetical protein ACD_15C00031G0008 [uncultured bacterium]
Length = 289
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 144/316 (45%), Gaps = 70/316 (22%)
Query: 14 EEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVT 73
+E ++I ++HN V + L++ + + D+ KG +++ + G E M
Sbjct: 37 KEPVYIIGSLVHNDQVMETLKKKGLIKVD-----SVSDIPEKG-TLIIRSHGTTQEVMEA 90
Query: 74 LNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAG-KYIIVKN 132
KN++I+D TCP+V K E K Y +I G H E + S+ G K I+ +
Sbjct: 91 ARAKNIKIIDATCPFVGKTKIVAENFYKKGYEVVICGDAKHAEIIGINSWIGNKGKIIGD 150
Query: 133 MKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTM-LKGE 191
KE + + KF+K V +G+ +QTT L
Sbjct: 151 PKEVDNI---------------------KFEKNV------------IGVLSQTTYKLSFL 177
Query: 192 TEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWN 251
+ +GKL+ +H I NTIC + +Q+ + ++ +E VD+++VVGG +
Sbjct: 178 QDVVGKLLASG----------KKHIIIENTICSDSTTKQNEIRQLAQE-VDVVIVVGGKS 226
Query: 252 SSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITS 311
SSNT+ L EI+ G +Y I++++ + KE W +G IGIT+
Sbjct: 227 SSNTNKLAEISRAAGTKTYHIETKEEL-----------------KEAWF-EGAEKIGITA 268
Query: 312 GASTPDKAVEDVLKKV 327
GAST V +V++++
Sbjct: 269 GASTAQFLVSEVIEEI 284
>gi|167842322|ref|ZP_02469006.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
thailandensis MSMB43]
Length = 313
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 133/312 (42%), Gaps = 66/312 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V + L + + ++ D V G V + A G A
Sbjct: 33 VYVRHEIVHNRHVVENLRNKGARFV------EELDEVPHGAVAIFSAHGVAQTVEKDAEA 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKE 135
+ + ++D TCP V+KV ++ D I+ G H E T + I+V++ E
Sbjct: 87 RGLDVLDATCPLVTKVHVQGRQYVAADRRLILIGHAGHPEVEGTIGQIPAEVILVQSEAE 146
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
+ L + T A++ QTT+ +T I
Sbjct: 147 VDT---------LTLPADTPVAYV-----------------------TQTTLSVDDTRGI 174
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
+ + + G + IC ATQ RQ A+ ++ E+VD++LVVG NSSN+
Sbjct: 175 IEALHRRFTDIVGPDT--------RDICYATQNRQAAVREL-SEQVDVLLVVGATNSSNS 225
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L+EI + G+PSY + G++I + W + +G+T+GAS
Sbjct: 226 NRLREIGTESGVPSYL------VADGSEI-----------RAEWFASAR-AVGLTAGASA 267
Query: 316 PDKAVEDVLKKV 327
P++ VEDV+ +
Sbjct: 268 PEEMVEDVIAAL 279
>gi|404476231|ref|YP_006707662.1| hydroxymethylbutenyl pyrophosphate reductase [Brachyspira
pilosicoli B2904]
gi|404437720|gb|AFR70914.1| hydroxymethylbutenyl pyrophosphate reductase [Brachyspira
pilosicoli B2904]
Length = 577
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 149/329 (45%), Gaps = 69/329 (20%)
Query: 4 IAYEARKQFPE-----EKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDV 58
+ Y K F + E+I++ +IHNP LE+ V+ E+ + V++ V
Sbjct: 15 VKYAVEKTFSQASKSNEEIYVDGHLIHNPQTLDMLEKTGVKT--YEDTEDDMSVLDDKTV 72
Query: 59 VVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETV 118
++ A G + E L++ +IV+ TC +V+K+ V+KH Y I+ G +H E +
Sbjct: 73 II-RAHGISPERREALSSHAKKIVNLTCKYVAKIQALVKKHSSLGYRVIVIGNPTHPEII 131
Query: 119 ATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVK 178
FA +V K+ +EK P+ D K
Sbjct: 132 GVCGFAQDVYVV-----------------------YKDEDIEKL---------PEDD-KK 158
Query: 179 VGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVE 238
I QTT+ K E K V + + K+ N I NTIC+AT++RQ+ + +
Sbjct: 159 TLIVAQTTLQK---ETFNKFVSQ-IQDKYK----NSELIIKNTICEATEQRQNEILD-IA 209
Query: 239 EKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKEN 298
++ D++LV+GG SSNT +L +IA PS++++ + E +EK +
Sbjct: 210 KRNDVVLVIGGSESSNTRNLYKIASSIK-PSFYVEFK----------------EDLEKID 252
Query: 299 WLPKGQITIGITSGASTPDKAVEDVLKKV 327
P +GI +GASTPD +ED+ + +
Sbjct: 253 LTPYKN--VGIMAGASTPDWLIEDIAQTI 279
>gi|365846559|ref|ZP_09387061.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Yokenella
regensburgei ATCC 43003]
gi|364573691|gb|EHM51178.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Yokenella
regensburgei ATCC 43003]
Length = 316
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 139/322 (43%), Gaps = 61/322 (18%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L E I +Q V G +++ A G + +
Sbjct: 33 IYVRHEVVHNRYVVDSLRERGAIFI------EQISEVPDGTILIFSAHGVSQAVRNEAKS 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++ + D TCP V+KV V + + SI+ G H E T G+Y N
Sbjct: 87 RDLTVFDATCPLVTKVHMEVARASRRGEESILIGHAGHPEVEGTM---GQY---SNPAGG 140
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
Y+ + S + + K K K+ QTT+ +T +I
Sbjct: 141 MYLVE-----------SPDDVWKLKVKNEE-----------KLSFMTQTTLSVDDTSDII 178
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+ + + G + IC AT RQ+A+ + + E+ D++LVVG NSSN++
Sbjct: 179 DALRQRFPKIVGPRK--------DDICYATTNRQEAV-RALAEQADVVLVVGSKNSSNSN 229
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L E+A+ G +Y ID I +E W+ K +G+T+GAS P
Sbjct: 230 RLAELAQRMGKAAYLIDDATDI-----------------QERWV-KDAACVGVTAGASAP 271
Query: 317 DKAVEDVLKKVFEIKREEALQL 338
D V++V++++ E+ EAL L
Sbjct: 272 DILVQNVIRRLQELGGGEALPL 293
>gi|329895219|ref|ZP_08270883.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [gamma
proteobacterium IMCC3088]
gi|328922457|gb|EGG29799.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [gamma
proteobacterium IMCC3088]
Length = 317
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 138/322 (42%), Gaps = 60/322 (18%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L + VEE D V +G V+ A G +
Sbjct: 33 IFVRHEVVHNKVVVDDLRSKGA--VFVEE----LDEVPEGATVIFSAHGVSQAVRSEAER 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V H + I+ G H E T G+Y
Sbjct: 87 RGLKVFDATCPLVTKVHMEVTLHSRDGDECILIGHKGHPEVDGTM---GQY--------- 134
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
D GG + + + K A ++ QTT+ ++
Sbjct: 135 ----DASNGGAMYLVEDEDDVAKLQVKNAE-----------RLSYVTQTTL---SVDDTA 176
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
++++ R ++ + + IC ATQ RQDA+ K + E+ D ILVVG NSSN++
Sbjct: 177 RVIDALRARFPSIKGPRK-----DDICYATQNRQDAV-KALAEQADCILVVGSPNSSNSN 230
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L+E+A G P+Y ID GP + + +W Q T+GIT+GAS P
Sbjct: 231 RLRELAVRMGTPAYLID-----GPEDL------------QRDWFETCQ-TVGITAGASAP 272
Query: 317 DKAVEDVLKKVFEIKREEALQL 338
+ V+ V + E E A++L
Sbjct: 273 EHLVQAVAAAMQEWGGERAVEL 294
>gi|167854873|ref|ZP_02477650.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Haemophilus
parasuis 29755]
gi|167854052|gb|EDS25289.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Haemophilus
parasuis 29755]
Length = 314
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 134/311 (43%), Gaps = 61/311 (19%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L+ A I VEE D V G +V+ A G +
Sbjct: 33 IYVRHEVVHNRFVVDGLK--AKGAIFVEE----LDEVPDGAIVIFSAHGVSQAVRHEAKR 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V + K +I+ G H E V T G+Y
Sbjct: 87 RELKVFDATCPLVTKVHMQVARASKKGTKAILIGHEGHPEVVGT---MGQY--------- 134
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
D GG +E + G D DL QTT+ +T ++
Sbjct: 135 ----DNEKGGIF---------LVEDVEDIAKLGLKEDEDLT---FMTQTTLSIDDTIDV- 177
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+E + ++ + N IC AT RQ A+ ++ + L+LVVG NSSN++
Sbjct: 178 --IEALKQKYPAIQGPRK-----NDICYATTNRQQAVRELA-KLAQLVLVVGSKNSSNSN 229
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L E+A G PS ID + I P NWL +G TIGIT+GAS P
Sbjct: 230 RLAELASRMGTPSQLIDGPQDIDP-----------------NWL-QGVTTIGITAGASAP 271
Query: 317 DKAVEDVLKKV 327
+ V+ V++ +
Sbjct: 272 EILVQSVVEHL 282
>gi|194364905|ref|YP_002027515.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Stenotrophomonas maltophilia R551-3]
gi|238693458|sp|B4SP20.1|ISPH_STRM5 RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|194347709|gb|ACF50832.1| hydroxymethylbutenyl pyrophosphate reductase [Stenotrophomonas
maltophilia R551-3]
Length = 316
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 133/316 (42%), Gaps = 63/316 (19%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L++ I VEE D V + V+ A G +
Sbjct: 33 IYVRHEVVHNRFVVDDLKQRGA--IFVEE----LDEVPDNNTVIFSAHGVSQAVRQEAER 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V +H + ++ G H E T
Sbjct: 87 RGLKVFDATCPLVTKVHFEVARHCRAGRDVVLIGHAGHPEVEGTM--------------- 131
Query: 137 EYVCDYILGGELNGSSSTKEAFL-EKFKKAVSKGF-DPDVDLVKVGIANQTTMLKGETEE 194
G+ N + T + +L E ++ + P+ QTT+ +T
Sbjct: 132 ---------GQWNREAGTGQIYLVEDVEQVATLQIKQPE----NFAYTTQTTLSVDDTRG 178
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
I + + G +N + IC ATQ RQDA+ + + + DL+LVVG NSSN
Sbjct: 179 IIDALRERFPAMQGPKN--------DDICYATQNRQDAVRDLAK-RCDLVLVVGSPNSSN 229
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
++ L E+A G+ SY ID I P W+ G+ IG+T+GAS
Sbjct: 230 SNRLSELARREGVESYLIDGAHEIDPA-----------------WV-VGKQHIGVTAGAS 271
Query: 315 TPDKAVEDVLKKVFEI 330
P V+ VL ++ E+
Sbjct: 272 APQVLVDGVLARLAEL 287
>gi|389774520|ref|ZP_10192639.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Rhodanobacter
spathiphylli B39]
gi|388438119|gb|EIL94874.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Rhodanobacter
spathiphylli B39]
Length = 319
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 143/314 (45%), Gaps = 66/314 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V +L A + VEE V G V+ A G + +
Sbjct: 33 IYVRHEVVHNRYVVDKLR--ADGAVFVEE----LHEVPDGATVIFSAHGVSQAVREEADQ 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++++ D TCP V+KV V + + + ++ G H E T
Sbjct: 87 RHLKVFDATCPLVTKVHMEVARLGRIGRSVVLIGHAGHPEVEGTM--------------- 131
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFK--KAVSKGFDPDVDLVKVGIANQTTMLKGETEE 194
G+ N ++S + +E + ++ F + V QTT+ +T
Sbjct: 132 ---------GQWNPANSGEILLVESLEDVATLAPAFPQLLSYV-----TQTTLSVDDT-- 175
Query: 195 IGKLVEKTMMRKF-GVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSS 253
K + + +KF +E + + IC ATQ RQDA+ ++ + VDL+LVVG NSS
Sbjct: 176 --KAIIDALRQKFPDIEGPRK-----DDICYATQNRQDAVRRLAD-AVDLMLVVGSVNSS 227
Query: 254 NTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGA 313
N++ L+E+AE +G+ S+ ID + I + +WL G IG+T+GA
Sbjct: 228 NSNRLRELAEKQGVRSFLIDGAEHI-----------------ERSWL-DGVGRIGLTAGA 269
Query: 314 STPDKAVEDVLKKV 327
S P+K V DV+ ++
Sbjct: 270 SAPEKLVRDVIARL 283
>gi|390570084|ref|ZP_10250356.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
terrae BS001]
gi|420250143|ref|ZP_14753369.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Burkholderia sp. BT03]
gi|389937971|gb|EIM99827.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
terrae BS001]
gi|398062359|gb|EJL54137.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Burkholderia sp. BT03]
Length = 314
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 132/309 (42%), Gaps = 66/309 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V L + + ++ D V +G V + A G A
Sbjct: 33 VYVRHEIVHNRHVVDNLRRKGARFV------EELDEVPQGAVAIFSAHGVAQSVERDAEQ 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKE 135
+ + ++D TCP V+KV ++ G T I+ G H E T GK ++V++
Sbjct: 87 RGLDVLDATCPLVTKVHVQGRQYVGGGRTLILIGHAGHPEVEGTIGQIPGKVLLVQS--- 143
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
EA + K + + D L V QTT+ +T I
Sbjct: 144 --------------------EAEVAKLELPI------DTPLAYV---TQTTLSVDDTRGI 174
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
+++ G + IC ATQ RQ A+ ++ +VD++LVVG NSSN+
Sbjct: 175 IDALKRRFPDIVGPDT--------RDICYATQNRQAAVREL-STQVDVLLVVGATNSSNS 225
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L+EI + G+PS+ + + P W + T+GIT+GAS
Sbjct: 226 NRLREIGSETGVPSFLVADGSEVKP-----------------EWFATVK-TVGITAGASA 267
Query: 316 PDKAVEDVL 324
P++ VE+V+
Sbjct: 268 PEEMVENVI 276
>gi|386288497|ref|ZP_10065638.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [gamma
proteobacterium BDW918]
gi|385278513|gb|EIF42484.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [gamma
proteobacterium BDW918]
Length = 315
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 140/325 (43%), Gaps = 64/325 (19%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L + + + V +V+ A G +
Sbjct: 33 IYVRHEVVHNKFVVENLRQRGAVFV------DELIEVPDDKIVIFSAHGVSQAVRKEAQT 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V ++ G H E T
Sbjct: 87 RGLKVFDATCPLVTKVHMEVVHFSGEGRECVLIGHKGHPEVEGTM--------------- 131
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGF-DPDVDLVKVGIANQTTMLKGETEEI 195
G+ +G+ +E ++A++ +PD ++ QTT+ +T
Sbjct: 132 ---------GQYSGAQGGDIYLVEDVEQALALEVQNPD----RLSFVTQTTLSMDDTAA- 177
Query: 196 GKLVEKTMMRKF-GVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
V + KF +E + + IC ATQ RQDA+ K + E+VDL+LVVG NSSN
Sbjct: 178 ---VIDALRSKFPNIEGPRK-----DDICYATQNRQDAV-KTLAEQVDLVLVVGSPNSSN 228
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
++ L+E+AE G +Y IDSE I + WL IGIT+GAS
Sbjct: 229 SNRLRELAERIGCKAYLIDSETDI-----------------RSEWLADNP-RIGITAGAS 270
Query: 315 TPDKAVEDVLKKVFEIKREEALQLA 339
P+ V V++++ E+ + ++LA
Sbjct: 271 APEVLVHAVVQRLCELGAQAPVELA 295
>gi|385208297|ref|ZP_10035165.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Burkholderia sp. Ch1-1]
gi|385180635|gb|EIF29911.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Burkholderia sp. Ch1-1]
Length = 319
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 143/315 (45%), Gaps = 66/315 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V + L + I ++ + V G+ V+ A G +
Sbjct: 43 IYVRHEIVHNAYVVEDLRKKGAIFI------ERLEEVPPGNTVIFSAHGVSRAVRSEAET 96
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYI-IVKNMKE 135
+ +++ D TCP V+KV V K ++ + ++ G H E T AG+ + +V+++++
Sbjct: 97 RGLRVYDATCPLVTKVHIEVAKMRQDGFDIVMIGHKGHPEVEGTMGQAGEGMHLVEDIED 156
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
+ + + DP+ ++ QTT+ ++
Sbjct: 157 VQAL----------------------------QLADPE----RIAFVTQTTL---SVDDA 181
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
+++ + + + IC ATQ RQDA+ K + + D+++VVG NSSN+
Sbjct: 182 AQIIAALKAKYPSIREPKKQ-----DICYATQNRQDAV-KFMAPQCDVVIVVGSPNSSNS 235
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L+E+AE G+P+Y +DS +I W+ +G+ IG+T+GAS
Sbjct: 236 NRLRELAEKLGVPAYMVDSPDQI-----------------DAVWV-EGKRRIGVTAGASA 277
Query: 316 PDKAVEDVLKKVFEI 330
P+ + V+ ++ E+
Sbjct: 278 PEVLAQAVIARLREL 292
>gi|381399043|ref|ZP_09924314.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microbacterium
laevaniformans OR221]
gi|380773787|gb|EIC07220.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Microbacterium
laevaniformans OR221]
Length = 353
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 143/328 (43%), Gaps = 73/328 (22%)
Query: 2 AFIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVL 61
A IA E + +++ +I+HN V LE A + VEE D V +G VV
Sbjct: 46 AVIAVEKALERYGAPVYVRKQIVHNIHVVTELE--AKGAVFVEE----VDEVPEGAHVVF 99
Query: 62 PAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATA 121
A G + + +++ +Q +D TCP V+KV + + D+ ++ G HEE TA
Sbjct: 100 SAHGVSPAVVNAASDRGLQAIDATCPLVTKVHREAVRFARDDFEILLIGHDGHEEVEGTA 159
Query: 122 SFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGI 181
A ++ V N S EA + V K D KV
Sbjct: 160 GEAPDHVTVVN--------------------SPAEA-----DRVVVK------DPAKVVW 188
Query: 182 ANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKM 236
+QTT+ ET E V + E F + IC ATQ RQ A+ K
Sbjct: 189 LSQTTLSVDETMET-------------VRRLRERFPELQDPPSDDICYATQNRQVAI-KK 234
Query: 237 VEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEK 296
V + DL++VVG NSSN+ L E+A + G K AY++ + +++
Sbjct: 235 VAKDADLVIVVGSANSSNSVRLVEVALEY---------------GAKAAYRVDYAHEIQQ 279
Query: 297 ENWLPKGQITIGITSGASTPDKAVEDVL 324
E WL G T+G+TSGAS P+ V++VL
Sbjct: 280 E-WL-DGVETVGVTSGASVPEVLVQEVL 305
>gi|41408782|ref|NP_961618.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
avium subsp. paratuberculosis K-10]
gi|417749726|ref|ZP_12398115.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Mycobacterium avium subsp. paratuberculosis S397]
gi|440778124|ref|ZP_20956892.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
avium subsp. paratuberculosis S5]
gi|50400912|sp|Q73WH6.1|ISPH_MYCPA RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|41397140|gb|AAS05001.1| LytB' [Mycobacterium avium subsp. paratuberculosis K-10]
gi|336458725|gb|EGO37685.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Mycobacterium avium subsp. paratuberculosis S397]
gi|436721508|gb|ELP45632.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
avium subsp. paratuberculosis S5]
Length = 332
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 135/314 (42%), Gaps = 65/314 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V LE+ + ++ D V +G +VV A G A
Sbjct: 55 VYVRHEIVHNRHVVSTLEKAGAVFV------EETDEVPEGAIVVFSAHGVAPTVHAAAAE 108
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+N+ +D TCP V+KV + + DY ++ G HEE V TA A ++ +
Sbjct: 109 RNLHTIDATCPLVTKVHNEARRFARNDYDILLIGHEGHEEVVGTAGEAPDHVQL------ 162
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
++G ++ + K V +QTT+ ET EI
Sbjct: 163 -----------VDGVAAVDNVRVRDEDKVV--------------WLSQTTLSVDETMEI- 196
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
VE+ R +++ + IC ATQ RQ A+ M E DL++VVG NSSN+
Sbjct: 197 --VERLRQRFPKLQDPPS-----DDICYATQNRQVAVKAMAPE-CDLVIVVGSRNSSNSV 248
Query: 257 HLQEI-AEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
L E+ ++ +D I P WL +G T+G+TSGAS
Sbjct: 249 RLVEVALGGGAGAAHLVDWADDIDPA-----------------WL-EGVTTVGVTSGASV 290
Query: 316 PDKAVEDVLKKVFE 329
P+ V+ VL+++ E
Sbjct: 291 PEVLVQGVLERLAE 304
>gi|254774114|ref|ZP_05215630.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
avium subsp. avium ATCC 25291]
Length = 332
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 135/314 (42%), Gaps = 65/314 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V LE+ + ++ D V +G +VV A G A
Sbjct: 55 VYVRHEIVHNRHVVSTLEKAGAVFV------EETDEVPEGAIVVFSAHGVAPTVHAAAAE 108
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+N+ +D TCP V+KV + + DY ++ G HEE V TA A ++ +
Sbjct: 109 RNLHTIDATCPLVTKVHNEARRFARNDYDILLIGHEGHEEVVGTAGEAPDHVQL------ 162
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
++G ++ + K V +QTT+ ET EI
Sbjct: 163 -----------VDGVAAVDNVTVRDEDKVV--------------WLSQTTLSVDETMEI- 196
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
VE+ R +++ + IC ATQ RQ A+ M E DL++VVG NSSN+
Sbjct: 197 --VERLRQRFPKLQDPPS-----DDICYATQNRQVAVKAMAPE-CDLVIVVGSRNSSNSV 248
Query: 257 HLQEI-AEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
L E+ ++ +D I P WL +G T+G+TSGAS
Sbjct: 249 RLVEVALGGGAGAAHLVDWADDIDPA-----------------WL-EGVTTVGVTSGASV 290
Query: 316 PDKAVEDVLKKVFE 329
P+ V+ VL+++ E
Sbjct: 291 PEVLVQGVLERLAE 304
>gi|329911399|ref|ZP_08275503.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Oxalobacteraceae bacterium IMCC9480]
gi|327545924|gb|EGF31024.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Oxalobacteraceae bacterium IMCC9480]
Length = 317
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 140/318 (44%), Gaps = 78/318 (24%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V L I +EE V G VV A G + +
Sbjct: 37 IYVRHEIVHNAYVVDDLRTKGA--IFIEE----LADVPTGQTVVFSAHGVSKAVKIEAEE 90
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATA--SFAGKYIIVKNMK 134
+ ++I D TCP V+KV VEK ++ I+ G H E T S G Y++
Sbjct: 91 RGLRIFDATCPLVTKVHVEVEKMRRDGREIIMIGHDGHPEVEGTMGQSEQGMYLV----- 145
Query: 135 EAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEE 194
++ A L+ + PD+ + +QTT+ +T +
Sbjct: 146 ----------------ETTDDVARLQVAR--------PDL----LAYVSQTTLSVDDTAD 177
Query: 195 IGKLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGG 249
I + + + F IC AT RQ+A+ K + +V+L++VVG
Sbjct: 178 I-------------IAALKQRFPDIAEPKKGDICYATTNRQEAV-KFMAPQVELVIVVGS 223
Query: 250 WNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGI 309
NSSN++ L+E+AE +G+PS+ +D+ ++I P WL +G+ IG+
Sbjct: 224 PNSSNSNRLREVAEKKGVPSFMVDNAEQIEPA-----------------WL-EGKQRIGV 265
Query: 310 TSGASTPDKAVEDVLKKV 327
T+GAS P+ V+ V+ ++
Sbjct: 266 TAGASAPEVLVQAVIDRL 283
>gi|345009042|ref|YP_004811396.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Streptomyces
violaceusniger Tu 4113]
gi|344035391|gb|AEM81116.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Streptomyces
violaceusniger Tu 4113]
Length = 347
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 141/329 (42%), Gaps = 73/329 (22%)
Query: 2 AFIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVL 61
A IA E + I++ EI+HN V + LE+ I V+E ++ V +G +V+
Sbjct: 27 AVIAVEKALEQYGAPIYVRKEIVHNKYVVRTLEKKGA--IFVDETEE----VPEGSIVIF 80
Query: 62 PAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATA 121
A G A + + VD TCP V+KV + K DY ++ G HEE + T+
Sbjct: 81 SAHGVAPVVHEEAAERKLATVDATCPLVTKVHKEAVRFAKEDYDILLIGHEGHEEVIGTS 140
Query: 122 SFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGI 181
A +I + ++G K + D KV
Sbjct: 141 GEAPDHITL-----------------VDGPDDVKNVEVR--------------DESKVVW 169
Query: 182 ANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKM 236
+QTT+ ET E V+ + E F + IC ATQ RQ A+ K
Sbjct: 170 LSQTTLSVDETMET-------------VDALKERFPQLISPPSDDICYATQNRQIAI-KQ 215
Query: 237 VEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEK 296
V + DL++VVG NSSN+ L E+A IG G K + + + ++
Sbjct: 216 VAAESDLVIVVGSKNSSNSVRLVEVA---------------IGAGAKDGHLVDYASEID- 259
Query: 297 ENWLPKGQITIGITSGASTPDKAVEDVLK 325
E WL +G T+G+TSGAS PD VE VL+
Sbjct: 260 EAWL-EGVTTVGVTSGASVPDVLVEGVLE 287
>gi|339481687|ref|YP_004693473.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nitrosomonas
sp. Is79A3]
gi|338803832|gb|AEJ00074.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nitrosomonas
sp. Is79A3]
Length = 314
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 148/324 (45%), Gaps = 73/324 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + LE+ + + D V + +++ A G + +
Sbjct: 34 IYVRHEVVHNRFVVENLEKKGAVFV------ENLDEVPQDSILIFSAHGVSHAVRREAAD 87
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V K +K I+ G H E T
Sbjct: 88 RKLKVFDATCPLVTKVHVEVAKMRKDGKEIIMIGHQGHPEVEGTM--------------- 132
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKV------GIANQTTMLKG 190
G+++G K +L + + DVD +KV QTT+
Sbjct: 133 ---------GQIDGED--KGMYLVETEM--------DVDALKVRDEANLAYVTQTTL--- 170
Query: 191 ETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGW 250
++ ++V+ + R+F + + + IC ATQ RQDA+ KMV++ DL++VVG
Sbjct: 171 SVDDAARIVD-ALRRRFPMITGPKK----DDICYATQNRQDAVKKMVDQ-CDLVIVVGSP 224
Query: 251 NSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGIT 310
NSSN++ L E+A + + +Y +D +++ +E+W G+ IGIT
Sbjct: 225 NSSNSNRLCEVARNANVEAYMVDRAEQL-----------------QEDWF-LGKKIIGIT 266
Query: 311 SGASTPDKAVEDVLKKVFEIKREE 334
+GAS P+ V+ V+ ++ +I E+
Sbjct: 267 AGASAPEILVQQVISRLKQIGAEQ 290
>gi|296136105|ref|YP_003643347.1| hydroxymethylbutenyl pyrophosphate reductase [Thiomonas intermedia
K12]
gi|295796227|gb|ADG31017.1| hydroxymethylbutenyl pyrophosphate reductase [Thiomonas intermedia
K12]
Length = 327
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 132/311 (42%), Gaps = 65/311 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V L+ A + V+E + V KG VV A G +
Sbjct: 51 IYVRHEIVHNTYVVNDLK--AKGAVFVDE----LEQVPKGGTVVFSAHGVSQAVRAQALA 104
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+Q+ D TCP V+KV V K ++ ++ G H E T A +V+ + +
Sbjct: 105 LGLQVFDATCPLVTKVHVEVAKMRRDGLEIVMIGHAGHPEVEGTMGQAEGIYLVQTLDDV 164
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
LN + AF+ QTT+ + EI
Sbjct: 165 ---------ARLNIAPDAPLAFV-----------------------TQTTLSVDDAAEI- 191
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+ +F H IC ATQ RQDA+ KM+ +VD+++VVG SSN++
Sbjct: 192 ---VAALRARFP----QVHEPKKQDICYATQNRQDAV-KMLAPQVDVVIVVGSPTSSNSN 243
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L+E+A+ G P+Y +D + + + WL +G IG+T+GAS P
Sbjct: 244 RLREVAQRMGKPAYMVDQVEDL-----------------RAEWL-EGARQIGLTAGASAP 285
Query: 317 DKAVEDVLKKV 327
+ V+ V+ ++
Sbjct: 286 EALVDQVVARL 296
>gi|433678781|ref|ZP_20510595.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Xanthomonas
translucens pv. translucens DSM 18974]
gi|430816103|emb|CCP41114.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Xanthomonas
translucens pv. translucens DSM 18974]
Length = 316
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 136/329 (41%), Gaps = 71/329 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L++ I VEE D V G+ V+ A G +
Sbjct: 33 IYVRHEVVHNRFVVDDLKQRGA--IFVEE----LDEVPDGNTVIFSAHGVSQAVRQEAER 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATAS------FAGKYIIV 130
+ +++ D TCP V+KV V +H + ++ G H E T AG+ +V
Sbjct: 87 RGLKVFDATCPLVTKVHFEVARHCRAGRDVVLIGHAGHPEVEGTMGQWNRERGAGRIYLV 146
Query: 131 KNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKG 190
+++++ L+ A+ QTT+
Sbjct: 147 EDIEQV---------ATLDIQQPENLAY-----------------------TTQTTLSVD 174
Query: 191 ETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGW 250
+T I + G +N + IC ATQ RQDA+ + + DL+LVVG
Sbjct: 175 DTRGIIDALRARYPALQGPKN--------DDICYATQNRQDAVRDLARQ-CDLVLVVGSP 225
Query: 251 NSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGIT 310
NSSN++ L E+A G+ SY ID I P W+ G+ IG+T
Sbjct: 226 NSSNSNRLSELARRDGVESYLIDGADEIDPA-----------------WV-AGKRRIGLT 267
Query: 311 SGASTPDKAVEDVLKKVFEIKREEALQLA 339
+GAS P V+ V+ ++ E+ + +LA
Sbjct: 268 AGASAPQVLVDGVIARLRELGADGVGELA 296
>gi|374334778|ref|YP_005091465.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Oceanimonas sp.
GK1]
gi|372984465|gb|AEY00715.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Oceanimonas sp.
GK1]
Length = 314
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 138/311 (44%), Gaps = 61/311 (19%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V +L++ + + D V ++V+ A G + N
Sbjct: 33 IYVRHEVVHNRYVVNKLKDAGAVFV------DELDQVPDDNIVIFSAHGVSKAVREEAKN 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V + + +I+ G H E T G+Y
Sbjct: 87 RGLKVFDATCPLVTKVHMEVHRASRKGIETILIGHAGHPEVEGTM---GQY--------- 134
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
+ GG + A LE + PD + QTT+ ET ++
Sbjct: 135 ----ESTEGGMYLVENPADVAALEVKQ--------PD----NLTFVTQTTLSVDETSDV- 177
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
++ R +E + + IC ATQ RQDA+ ++ KVDL+LVVG NSSN++
Sbjct: 178 --IDALRARFPTIEGPRK-----DDICYATQNRQDAVRELAA-KVDLMLVVGSRNSSNSN 229
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L+E+AE G ++ ID + I P WL +G IG+T+GAS P
Sbjct: 230 RLRELAEKIGTEAHLIDCVEMIEP-----------------VWL-EGAARIGVTAGASAP 271
Query: 317 DKAVEDVLKKV 327
+ V++V+ +
Sbjct: 272 EVLVQEVISHL 282
>gi|269219216|ref|ZP_06163070.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Actinomyces sp.
oral taxon 848 str. F0332]
gi|269211363|gb|EEZ77703.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Actinomyces sp.
oral taxon 848 str. F0332]
Length = 385
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 139/319 (43%), Gaps = 73/319 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ EI+HN V + L I V E ++ V +G VV A G +
Sbjct: 77 VYVRKEIVHNKYVVETLSRRGA--IFVSETEE----VPEGARVVFSAHGVSPAVHAEAAA 130
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++Q +D TCP V+KV + K DY ++ G HEE T A ++I V N E
Sbjct: 131 RSLQTIDATCPLVTKVHKQAVRFAKDDYDILLIGHTGHEEVEGTQGEAPEHIQVVNGPE- 189
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
E++G DPD KV +QTT+ ET
Sbjct: 190 ----------EVDGIEVR----------------DPD----KVVWISQTTLSVDETL--- 216
Query: 197 KLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGGWN 251
KT+ R + E F + + IC ATQ RQ A+ M E D ++VVG N
Sbjct: 217 ----KTVRR------LRERFPNLVDPPSDDICYATQNRQGAVKAMAPE-CDAVIVVGSAN 265
Query: 252 SSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITS 311
SSN+ L E+A + G AY++ E V E WL +G T+G+TS
Sbjct: 266 SSNSVRLVEVA---------------LEAGAGKAYRVDRAEEVRDE-WL-EGVQTVGLTS 308
Query: 312 GASTPDKAVEDVLKKVFEI 330
GAS P+ V DV++++ EI
Sbjct: 309 GASVPEILVRDVVERLAEI 327
>gi|403510359|ref|YP_006641997.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nocardiopsis
alba ATCC BAA-2165]
gi|402801237|gb|AFR08647.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nocardiopsis
alba ATCC BAA-2165]
Length = 311
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 141/318 (44%), Gaps = 77/318 (24%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +I+HN V + LEE I VEE ++ V +G +VV A G +
Sbjct: 31 IYVRKQIVHNTHVVRTLEERGA--IFVEETEE----VPEGAIVVFSAHGVSPAVHEQAEK 84
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYI-IVKNMKE 135
+ ++ +D TCP V+KV ++ D I+ G HEE T+ A ++I IV++ +E
Sbjct: 85 RRLKTIDATCPLVTKVHKEAKRFASEDRDIILIGHIGHEEVEGTSGEAPEHIQIVESPEE 144
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
+ V + DP+ V +QTT+ ET +
Sbjct: 145 VDKV----------------------------EVRDPN----NVSWLSQTTLSVDETNQT 172
Query: 196 GKLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGGW 250
V+ + E F + + IC AT RQDA+ M E +L++VVG
Sbjct: 173 -------------VDALRERFPNLLDPPSDDICYATSNRQDAVKAMAPE-CELVIVVGSD 218
Query: 251 NSSNTSHLQEIAEDRGI-PSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGI 309
NSSN+ L E+A D G SY ID+ LM E WL +G T+G+
Sbjct: 219 NSSNSVRLVEVALDAGADASYLIDN-----------AGLM------DEAWL-EGVTTVGV 260
Query: 310 TSGASTPDKAVEDVLKKV 327
TSGAS PD V ++L K+
Sbjct: 261 TSGASVPDILVRELLDKL 278
>gi|206564575|ref|YP_002235338.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
cenocepacia J2315]
gi|444359832|ref|ZP_21161127.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
cenocepacia BC7]
gi|444369475|ref|ZP_21169226.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
cenocepacia K56-2Valvano]
gi|198040615|emb|CAR56601.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 [Burkholderia
cenocepacia J2315]
gi|443599022|gb|ELT67332.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
cenocepacia K56-2Valvano]
gi|443601401|gb|ELT69544.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
cenocepacia BC7]
Length = 313
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 133/312 (42%), Gaps = 66/312 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V + L + + ++ D V G V + A G A
Sbjct: 33 VYVRHEIVHNRHVVENLRNKGARFV------EELDEVPHGAVAIFSAHGVAQTVERDAQT 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKE 135
+ + ++D TCP V+KV ++ I+ G H E T + I+V++ E
Sbjct: 87 RGLDVLDATCPLVTKVHVQGRQYVAAGRRLILIGHAGHPEVEGTIGQIPAEVILVQSEAE 146
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
+ L T A++ QTT+ +T I
Sbjct: 147 VDT---------LTLPVDTPVAYI-----------------------TQTTLSVDDTRGI 174
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
+ +++ G + IC ATQ RQ A+ ++ E+VD++LVVG NSSN+
Sbjct: 175 IEALQRRFTDLVGPDT--------RDICYATQNRQAAVREL-SEQVDVLLVVGATNSSNS 225
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L+EI + G+PSY + G+++ K W G T+G+T+GAS
Sbjct: 226 NRLREIGTESGVPSYLVAD------GSEV-----------KAEWF-AGVQTVGLTAGASA 267
Query: 316 PDKAVEDVLKKV 327
P++ VEDV+ +
Sbjct: 268 PEEMVEDVISAL 279
>gi|431807031|ref|YP_007233929.1| hydroxymethylbutenyl pyrophosphate reductase [Brachyspira
pilosicoli P43/6/78]
gi|430780390|gb|AGA65674.1| hydroxymethylbutenyl pyrophosphate reductase [Brachyspira
pilosicoli P43/6/78]
Length = 577
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 149/329 (45%), Gaps = 69/329 (20%)
Query: 4 IAYEARKQFPE-----EKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDV 58
+ Y K F + E+I++ +IHNP LE+ V+ E+ + V++ V
Sbjct: 15 VKYAVEKTFSQASKSSEEIYVDGHLIHNPQTLDMLEKTGVKT--YEDTEDDMSVLDDKTV 72
Query: 59 VVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETV 118
++ A G + E L++ +IV+ TC +V+K+ V+KH Y I+ G +H E +
Sbjct: 73 II-RAHGISPERREALSSHAKKIVNLTCKYVAKIQALVKKHSSLGYRVIVIGNPTHPEII 131
Query: 119 ATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVK 178
FA +V K+ +EK P+ D K
Sbjct: 132 GVCGFAKDVYVV-----------------------YKDEDIEKL---------PEDD-KK 158
Query: 179 VGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVE 238
I QTT+ K E K V + + K+ N I NTIC+AT++RQ+ + +
Sbjct: 159 TLIVAQTTLQK---ETFNKFVSQ-IQDKYK----NSELIIKNTICEATEQRQNEILD-IA 209
Query: 239 EKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKEN 298
++ D++LV+GG SSNT +L +IA PS++++ + E +EK +
Sbjct: 210 KRNDVVLVIGGSESSNTRNLYKIASSIK-PSFYVEFK----------------EDLEKID 252
Query: 299 WLPKGQITIGITSGASTPDKAVEDVLKKV 327
P +GI +GASTPD +ED+ + +
Sbjct: 253 LTPYKN--VGIMAGASTPDWLIEDIAQTI 279
>gi|269958672|ref|YP_003328459.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Anaplasma
centrale str. Israel]
gi|269848501|gb|ACZ49145.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Anaplasma
centrale str. Israel]
Length = 333
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 136/311 (43%), Gaps = 66/311 (21%)
Query: 15 EKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTL 74
+++ +EI+HN V ++M V+ + V +G V+V A G + +
Sbjct: 59 REVYALHEIVHNLHVVNSFKKMGVKFV------SALHEVPEGAVLVFSAHGVSQQVKEES 112
Query: 75 NNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-ASFAGKYIIVKNM 133
K + +VD TCP V+KV ++++ K Y I+ G H E + + ++V+N+
Sbjct: 113 RRKGLTVVDATCPLVTKVHLEIQRYDKSGYQVILVGHKGHREVEGSMGQVSNPVVLVQNV 172
Query: 134 KEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETE 193
++ + + S+ K A++ QTT+ +T
Sbjct: 173 QDVQ---------SIKIPSAAKLAYV-----------------------TQTTLSMDDTA 200
Query: 194 EIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSS 253
EI ++ R G + IC ATQ RQ A+ K + + VD++L +G NSS
Sbjct: 201 EIISALKLRFPRIVGPD--------LRDICYATQNRQTAV-KAMSQMVDVVLAIGSKNSS 251
Query: 254 NTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGA 313
N++ L ++A+ + +Y IDS + I WL G IGIT+GA
Sbjct: 252 NSNRLLDLAKAQNARAYLIDSYRNI-----------------DLEWLI-GARRIGITAGA 293
Query: 314 STPDKAVEDVL 324
S P+ V++V+
Sbjct: 294 SAPEILVQEVI 304
>gi|56416914|ref|YP_153988.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Anaplasma
marginale str. St. Maries]
gi|71152167|sp|Q5PAE7.1|ISPH_ANAMM RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|56388146|gb|AAV86733.1| lytB protein [Anaplasma marginale str. St. Maries]
Length = 342
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 136/311 (43%), Gaps = 66/311 (21%)
Query: 15 EKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTL 74
+++ +EI+HN V ++M V+ + V +G V+V A G + +
Sbjct: 68 REVYALHEIVHNLHVVNSFKKMGVKFVSA------LHEVPEGAVLVFSAHGVSQQVKEES 121
Query: 75 NNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-ASFAGKYIIVKNM 133
K + +VD TCP V+KV ++++ K Y I+ G H E + + ++V+N+
Sbjct: 122 RRKGLTVVDATCPLVTKVHLEIQRYDKSGYQVILVGHKGHREVEGSMGQVSNPVVLVQNV 181
Query: 134 KEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETE 193
++ + + S+ K A++ QTT+ +T
Sbjct: 182 QDVQ---------SIKIPSAAKLAYV-----------------------TQTTLSMDDTA 209
Query: 194 EIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSS 253
EI ++ R G + IC ATQ RQ A+ K + + VD++L +G NSS
Sbjct: 210 EIISALKLRFPRIVGPD--------LRDICYATQNRQTAV-KAMSQMVDVVLAIGSKNSS 260
Query: 254 NTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGA 313
N++ L ++A+ + +Y IDS + I WL G IGIT+GA
Sbjct: 261 NSNRLLDLAKAQNARAYLIDSYRNI-----------------DLEWLI-GARRIGITAGA 302
Query: 314 STPDKAVEDVL 324
S P+ V++V+
Sbjct: 303 SAPEILVQEVI 313
>gi|192292621|ref|YP_001993226.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Rhodopseudomonas palustris TIE-1]
gi|192286370|gb|ACF02751.1| hydroxymethylbutenyl pyrophosphate reductase [Rhodopseudomonas
palustris TIE-1]
Length = 314
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 137/317 (43%), Gaps = 70/317 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAA--VEEMVTL 74
+++ +EI+HN V + L+ A I VEE V V V A G A +EE
Sbjct: 39 VYVRHEIVHNKYVVESLK--AKGAIFVEE----LSEVPPKAVTVFSAHGVARSIEEEAA- 91
Query: 75 NNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-ASFAGKYIIVKNM 133
+++ +++ TCP V+KV +++ T I+ G H E T G ++V+N+
Sbjct: 92 -ARDLPVLNATCPLVTKVHNQGKRYTSKGRTLILIGHAGHPEVEGTMGQVPGPVLLVQNL 150
Query: 134 KEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETE 193
+ L T A++ QTT+ +T+
Sbjct: 151 DDV---------AALTLPPETPVAYI-----------------------TQTTLSVDDTK 178
Query: 194 EIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSS 253
+I + K G + IC ATQ RQ A+ +M + VDLILVVG NSS
Sbjct: 179 DIIVALSKKFHDIEGPDT--------RDICYATQNRQSAVRQM-SKLVDLILVVGANNSS 229
Query: 254 NTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGA 313
N++ L+EI + GIPSY I + P WL G+ +GIT+GA
Sbjct: 230 NSNRLREIGTEAGIPSYLIADGSELDPA-----------------WL-DGKKAVGITAGA 271
Query: 314 STPDKAVEDVLKKVFEI 330
S P+ V+DV++ + I
Sbjct: 272 SAPEVLVDDVIEALRRI 288
>gi|387818004|ref|YP_005678349.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
botulinum H04402 065]
gi|322806046|emb|CBZ03613.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
botulinum H04402 065]
Length = 638
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 144/328 (43%), Gaps = 74/328 (22%)
Query: 16 KIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLN 75
KI+ +IHN V L+ ++ I +++ D +NK D +++ + G ++ + L
Sbjct: 32 KIYTLGPLIHNNDVVNLLKGKGIEPISIQD----VDKLNKDDTIIIRSHGVPLQTINYLK 87
Query: 76 NKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKE 135
+K + +++TTCP V+ + +K+ + Y +I G +H E + + I+
Sbjct: 88 DKGLNVINTTCPHVANIQIKAKKYYEEGYKIVIVGDENHPEVIGINGWCNNSAIISKD-- 145
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
G +N L+K KV + QTT + E++
Sbjct: 146 ---------GANINN--------LDK----------------KVCVLCQTTEKQENWEKV 172
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
++ K + ++FNTIC+ATQ RQ + K+ EKVD ++V+GG NSSNT
Sbjct: 173 LTILIKN----------SREILAFNTICNATQVRQQSAKKL-SEKVDSMIVIGGKNSSNT 221
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L EI + + +++ K I + K IG+T+GAST
Sbjct: 222 TKLYEICKSNCKNTIHVENAKEIPE------------------HIYKNSNIIGVTAGAST 263
Query: 316 PDKAVEDVLKK------VFEIKREEALQ 337
PD +++ + K + E+ + E L
Sbjct: 264 PDWIIKEAINKMNNNDSIIEVSKNEMLN 291
>gi|451979678|ref|ZP_21928091.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 [Nitrospina
gracilis 3/211]
gi|451763047|emb|CCQ89288.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 [Nitrospina
gracilis 3/211]
Length = 296
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 144/323 (44%), Gaps = 64/323 (19%)
Query: 11 QFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEE 70
QF + + I +++HN VN+ L+ V + G D + K V++ A GAA +
Sbjct: 26 QFKSD-LTIVGQLVHNRQVNESLKRNGVDLV---NGIDDLDKI-KTKKVMITAHGAAEKM 80
Query: 71 MVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIV 130
L + D +CP V +V +V+ + +Y ++ G+ H E YI++
Sbjct: 81 KEALVEAGHIVYDASCPLVMRVHKTVKSMVEQNYFPVVIGQEEHVEVKGIVGDLDDYIVI 140
Query: 131 KNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKG 190
N E LEK + A +K F GI +QTT
Sbjct: 141 NN-----------------------EEDLEKLRAAPTKRF---------GIVSQTTQ--- 165
Query: 191 ETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGW 250
+ E++ LV RK + E NTIC T++RQ A+ + ++ VDL++V+GG+
Sbjct: 166 QMEKVENLV-----RKIREMDCVEDVAFVNTICQPTRDRQIAVRDLADQ-VDLMIVIGGY 219
Query: 251 NSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGIT 310
NSSNT L ++ +++ + ++ I++ ++ +W + +GIT
Sbjct: 220 NSSNTKKLVQVCDEKDVEAHHIEAATQL-----------------DRSWFTNKK-HVGIT 261
Query: 311 SGASTPDKAVEDVLKKVFEIKRE 333
+G STP+ + +V + +I +E
Sbjct: 262 AGTSTPEYVINEVHTAILKIAQE 284
>gi|323492577|ref|ZP_08097723.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio
brasiliensis LMG 20546]
gi|323313179|gb|EGA66297.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio
brasiliensis LMG 20546]
Length = 321
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 140/315 (44%), Gaps = 61/315 (19%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L++ I VEE V ++V+ A G +
Sbjct: 37 IYVRHEVVHNRFVVEGLKQRGA--IFVEE----LHEVPDDNIVIFSAHGVSQAVRKEAKE 90
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKN-MKE 135
+++ + D TCP V+KV V + + ++ G H E T G+Y K M
Sbjct: 91 RDLTVFDATCPLVTKVHMEVARASRKHMEVVLIGHAGHPEVEGTM---GQYASDKGGMYL 147
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
E D + A EK + DP + +QTT+ ET ++
Sbjct: 148 VETPADVV-------------ALKEKVR-------DPS----HLHYVSQTTLSVDETADV 183
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
+ + + G + IC ATQ RQDA+ +M + VD+++VVG NSSN+
Sbjct: 184 IEELRRVFPDIQGPRK--------DDICYATQNRQDAVREMATD-VDVVIVVGSKNSSNS 234
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L+E+AE G P Y D + I P W +G++ +G+T+GAS
Sbjct: 235 TRLKELAEKLGTPGYLTDCAEDIKP-----------------EWF-EGKVKVGVTAGASA 276
Query: 316 PDKAVEDVLKKVFEI 330
P++ V +L+++ ++
Sbjct: 277 PEELVNKILERIKQL 291
>gi|167835747|ref|ZP_02462630.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
thailandensis MSMB43]
gi|424902446|ref|ZP_18325962.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
thailandensis MSMB43]
gi|390932821|gb|EIP90221.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
thailandensis MSMB43]
Length = 326
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 142/316 (44%), Gaps = 68/316 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V + L++ I VEE + V G+ V+ A G +
Sbjct: 48 IYVRHEIVHNKYVVEDLKKKGA--IFVEE----LEEVPSGNTVIFSAHGVSKAVRDEAAV 101
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ ++I D TCP V+KV V K ++ ++ G H E T + + M
Sbjct: 102 RGLRIYDATCPLVTKVHVEVAKMRQEGVDIVMIGHKGHPEVEGTMGQ-----VERGMHLV 156
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTM-LKGETEEI 195
E V D V K PD +V + QTT+ + E I
Sbjct: 157 ESVED------------------------VRKLELPDPG--RVALVTQTTLSVDDAAEII 190
Query: 196 GKLVEK-TMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
G L K +R+ ++ IC ATQ RQDA+ K + + D+++VVG NSSN
Sbjct: 191 GALKAKFPAIREPKKQD----------ICYATQNRQDAV-KFMTPQCDVVIVVGSPNSSN 239
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
+S L+E+AE RG+ +Y +D+ ++I P W+ G+ IG+T+GAS
Sbjct: 240 SSRLREVAEKRGVAAYMVDAPEQIDPA-----------------WV-AGKRRIGVTAGAS 281
Query: 315 TPDKAVEDVLKKVFEI 330
P+ + V+ ++ E+
Sbjct: 282 APEVLAQAVIARLREL 297
>gi|90423234|ref|YP_531604.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Rhodopseudomonas palustris BisB18]
gi|90105248|gb|ABD87285.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Rhodopseudomonas palustris BisB18]
Length = 314
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 139/317 (43%), Gaps = 70/317 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAA--VEEMVTL 74
+++ +EI+HN V + L+ A I VE+ V V V A G A VEE
Sbjct: 39 VYVRHEIVHNKYVVESLK--AKGAIFVED----LSEVPPQAVTVFSAHGVARSVEEEAA- 91
Query: 75 NNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-ASFAGKYIIVKNM 133
+ + +++ TCP V+KV +++ I+ G H E V T G ++V+N+
Sbjct: 92 -ARGLPVLNATCPLVTKVHNQGKRYMSKGRALILIGHAGHPEVVGTMGQVPGPVLLVQNV 150
Query: 134 KEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETE 193
++ L + T A++ QTT+ +T+
Sbjct: 151 EDV---------AALTLPADTPVAYI-----------------------TQTTLSVDDTK 178
Query: 194 EIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSS 253
+I + ++F + IC ATQ RQ A+ + + VDLILVVG NSS
Sbjct: 179 DI----IAALAQRFS----DIQGPDIRDICYATQNRQSAVRDL-SKLVDLILVVGATNSS 229
Query: 254 NTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGA 313
N++ L+EI + GIPSY I + P +WL KG +GIT+GA
Sbjct: 230 NSNRLREIGTEVGIPSYLIADGSELNP-----------------DWL-KGVKAVGITAGA 271
Query: 314 STPDKAVEDVLKKVFEI 330
S P+ V+DV++ + I
Sbjct: 272 SAPEVLVDDVIEALRRI 288
>gi|118464410|ref|YP_880476.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
avium 104]
gi|118165697|gb|ABK66594.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
avium 104]
Length = 296
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 138/314 (43%), Gaps = 65/314 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V LE+ + VEE D V +G +VV A G A
Sbjct: 19 VYVRHEIVHNRHVVSTLEKAGA--VFVEET----DEVPEGAIVVFSAHGVAPTVHAAAAE 72
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+N+ +D TCP V+KV + + DY ++ G HEE V TA A ++ +
Sbjct: 73 RNLHTIDATCPLVTKVHNEARRFARNDYDILLIGHEGHEEVVGTAGEAPDHVQL------ 126
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
++G ++ + D D KV +QTT+ ET EI
Sbjct: 127 -----------VDGVAAVDNVTVR----------DED----KVVWLSQTTLSVDETMEI- 160
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
VE+ R +++ + IC ATQ RQ A+ M E DL++VVG NSSN+
Sbjct: 161 --VERLRQRFPKLQDPPS-----DDICYATQNRQVAVKAMAPE-CDLVIVVGSRNSSNSV 212
Query: 257 HLQEI-AEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
L E+ ++ +D I P WL +G T+G+TSGAS
Sbjct: 213 RLVEVALGGGAGAAHLVDWADDIDPA-----------------WL-EGVTTVGVTSGASV 254
Query: 316 PDKAVEDVLKKVFE 329
P+ V+ VL+++ E
Sbjct: 255 PEVLVQGVLERLAE 268
>gi|395795253|ref|ZP_10474562.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas sp.
Ag1]
gi|395340616|gb|EJF72448.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas sp.
Ag1]
Length = 315
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 135/317 (42%), Gaps = 72/317 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L I VEE D V +V+ A G +
Sbjct: 33 IYVRHEVVHNKFVVEDLRSRGA--IFVEE----LDQVPDDVIVIFSAHGVSQAVRTEAAG 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V ++ + I+ G H E T
Sbjct: 87 RGLKVFDATCPLVTKVHIEVARYSRDGRECILIGHAGHPEVEGTM--------------- 131
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKK-AVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
G+ +GS+ +E K A + +P+ K+ QTT+ +T +
Sbjct: 132 ---------GQYDGSNGGAIYLVEDEKDVAALQVHNPE----KLAFVTQTTLSMDDTSRV 178
Query: 196 GKLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGGW 250
++ + F + + IC ATQ RQDA+ ++ +E D++LVVG
Sbjct: 179 -------------IDALRSRFPAIGGPRKDDICYATQNRQDAVKQLADE-CDVVLVVGSP 224
Query: 251 NSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGIT 310
NSSN++ L+E+AE PSY ID + + + +W G IGIT
Sbjct: 225 NSSNSNRLRELAERMATPSYLIDGAEDM-----------------QRSWF-DGVERIGIT 266
Query: 311 SGASTPDKAVEDVLKKV 327
+GAS P+ V V++++
Sbjct: 267 AGASAPEVLVRGVIQQL 283
>gi|254000305|ref|YP_003052368.1| hydroxymethylbutenyl pyrophosphate reductase [Methylovorus
glucosetrophus SIP3-4]
gi|253986984|gb|ACT51841.1| hydroxymethylbutenyl pyrophosphate reductase [Methylovorus
glucosetrophus SIP3-4]
Length = 308
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 145/324 (44%), Gaps = 68/324 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L+ I ++ + V G+ V+ A G + E
Sbjct: 33 IYVRHEVVHNKFVVDELKRKGAVFI------EELEEVPPGNTVIFSAHGVSREVRTDAEA 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATA--SFAGKYIIVKNMK 134
+ +++ D TCP V+KV V K ++ ++ G H E T S G Y++
Sbjct: 87 RGLRVFDATCPLVTKVHNEVAKMRQDGKEIVMIGHKGHPEVEGTMGQSDGGMYLV----- 141
Query: 135 EAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEE 194
S ++ + K D K+ QTT+ ++
Sbjct: 142 -----------------ESPEDVVNLQVK-----------DPAKLAYVTQTTL---SIDD 170
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
+V + KF + + + ++IC ATQ RQDA+ M ++ DL++VVG NSSN
Sbjct: 171 AASIV-AALKDKFPLISAPKS----DSICYATQNRQDAVKAMAKD-CDLVIVVGSPNSSN 224
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
++ L+E+A+++GI SY +D+ + WL G+ IG+++GAS
Sbjct: 225 SNRLREVAQNQGIESYMVDNASYL-----------------NAEWL-AGKKRIGVSAGAS 266
Query: 315 TPDKAVEDVLKKVFEIKREEALQL 338
P+ V++V++++ E+ E +L
Sbjct: 267 APEILVKEVIQRLQEMGAAEVTEL 290
>gi|421835770|ref|ZP_16270433.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding
domain protein, partial [Clostridium botulinum
CFSAN001627]
gi|409742492|gb|EKN41873.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding
domain protein, partial [Clostridium botulinum
CFSAN001627]
Length = 277
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 138/312 (44%), Gaps = 68/312 (21%)
Query: 16 KIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLN 75
KI+ +IHN V L++ ++ I +++ D +NK D +++ + G ++ + L
Sbjct: 32 KIYTLGPLIHNNDVVNLLKDKGIEPISIQD----VDKLNKDDTIIIRSHGVPLQTINYLK 87
Query: 76 NKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKE 135
+K + +++TTCP V+ + +K+ + Y +I G +H E + + I+
Sbjct: 88 DKGLNVINTTCPHVANIQIKAKKYYEEGYKIVIVGDENHPEVIGINGWCNNSAII----- 142
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
S A + K KV + QTT + E++
Sbjct: 143 -----------------SKDGANINNLDK-------------KVCVLCQTTEKQENWEKV 172
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
++ K + ++FNTIC+ATQ RQ + K+ EKVD ++V+GG NSSNT
Sbjct: 173 LTILIKN----------SREILAFNTICNATQVRQQSAKKL-SEKVDSMIVIGGKNSSNT 221
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L EI + + +++ K I + K IG+T+GAST
Sbjct: 222 TKLYEICKSNCKNTIHVENAKEI------------------PEHIYKNSNIIGVTAGAST 263
Query: 316 PDKAVEDVLKKV 327
PD +++ + K+
Sbjct: 264 PDWIIKEAINKM 275
>gi|365825310|ref|ZP_09367268.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Actinomyces
graevenitzii C83]
gi|365258685|gb|EHM88691.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Actinomyces
graevenitzii C83]
Length = 342
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 133/319 (41%), Gaps = 75/319 (23%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ EI+HN V + L + + D V G VV A G +
Sbjct: 39 IYVRKEIVHNKYVVEALSRRGAIFV------NETDEVPPGARVVFSAHGVSPAVHEQAAA 92
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++ +D TCP V+KV + KGDY I+ G HEE T A ++I V
Sbjct: 93 RHLATIDATCPLVTKVHKQAVRFAKGDYDIILVGHSGHEEVEGTQGEAPEHIQV------ 146
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
+NG + + +K V +QTT+ ET E
Sbjct: 147 -----------VNGPEEVDQVQVRNPEKVV--------------WISQTTLSVDETMET- 180
Query: 197 KLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGGWN 251
V + E F + + IC ATQ RQ A+ +M + D+++VVG N
Sbjct: 181 ------------VRRLRERFPAMIDPPSDDICYATQNRQAAVKQMAP-RADVVIVVGSGN 227
Query: 252 SSNTSHLQEIAEDRGI-PSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGIT 310
SSN+ L+E+A + G +Y +D I P +WL + Q ++G+T
Sbjct: 228 SSNSVRLKEVALEAGAKAAYRVDYASEIDP-----------------SWLEQAQ-SVGLT 269
Query: 311 SGASTPDKAVEDVLKKVFE 329
SGAS P+ V +V++K+ E
Sbjct: 270 SGASVPEILVREVVQKLAE 288
>gi|217970192|ref|YP_002355426.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Thauera sp.
MZ1T]
gi|217507519|gb|ACK54530.1| hydroxymethylbutenyl pyrophosphate reductase [Thauera sp. MZ1T]
Length = 312
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 135/314 (42%), Gaps = 64/314 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L A I V+E D V G+ V+ A G ++
Sbjct: 36 IYVRHEVVHNKFVVDDLR--AKGAIFVDE----LDEVPTGNTVIFSAHGVSLAVREEAER 89
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V + + ++ G H E T
Sbjct: 90 RGLRVFDATCPLVTKVHVEVARMRDQGKEIVMIGHKGHPEVEGTM--------------- 134
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
G+++G E + V+ DP+ ++ QTT+ + I
Sbjct: 135 ---------GQVDGGIHLVETPADVAGLQVA---DPE----QLAYVTQTTLSVDDAAAIV 178
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+ R G + + IC ATQ RQDA+ K + D++ VVG NSSN++
Sbjct: 179 DALRTRFPRVVGPKK--------DDICYATQNRQDAV-KFMTPYADVVFVVGSKNSSNSN 229
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L+E+A RG+P+Y ID+ I P W+ +G+ IG+T+GAS P
Sbjct: 230 RLREVAALRGVPAYLIDNAAGIDPA-----------------WI-EGKRRIGVTAGASAP 271
Query: 317 DKAVEDVLKKVFEI 330
+ V +V+ ++ E+
Sbjct: 272 EVLVAEVIARLEEL 285
>gi|167561871|ref|ZP_02354787.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
oklahomensis EO147]
gi|167569092|ref|ZP_02361966.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
oklahomensis C6786]
Length = 326
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 142/316 (44%), Gaps = 68/316 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V + L++ I VEE V G+ V+ A G +
Sbjct: 48 IYVRHEIVHNKYVVEDLKKKGA--IFVEE----LAEVPSGNTVIFSAHGVSKAVRDEAAV 101
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ ++I D TCP V+KV V K ++ ++ G H E T + + M
Sbjct: 102 RGLRIYDATCPLVTKVHVEVAKMRQEGVDIVMIGHKGHPEVEGTMGQ-----VERGMHLV 156
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTM-LKGETEEI 195
E V D V K PD + +V + QTT+ + E I
Sbjct: 157 ESVED------------------------VRKLELPDPE--RVALVTQTTLSVDDAAEII 190
Query: 196 GKLVEK-TMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
G L K +R+ ++ IC ATQ RQDA+ K + + D+++VVG NSSN
Sbjct: 191 GALKTKFPAIREPKKQD----------ICYATQNRQDAV-KFMAPQCDVVIVVGSPNSSN 239
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
+S L+E+AE RG+ +Y +D+ ++I P W+ G+ IG+T+GAS
Sbjct: 240 SSRLREVAEKRGVAAYMVDAPEQIDPA-----------------WV-AGKRRIGVTAGAS 281
Query: 315 TPDKAVEDVLKKVFEI 330
P+ + V+ ++ E+
Sbjct: 282 APEVLAQAVIARLREL 297
>gi|77461070|ref|YP_350577.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
fluorescens Pf0-1]
gi|123603233|sp|Q3K6L8.1|ISPH_PSEPF RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|77385073|gb|ABA76586.1| IspH protein (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
reductase) [Pseudomonas fluorescens Pf0-1]
Length = 314
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 140/317 (44%), Gaps = 72/317 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQN-IPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLN 75
I++ +E++HN V +E++ ++ I VEE D V +V+ A G +
Sbjct: 33 IYVRHEVVHNKFV---VEDLRIRGAIFVEE----LDQVPDDVIVIFSAHGVSQAVRTEAA 85
Query: 76 NKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-----ASFAGKYIIV 130
+ +++ D TCP V+KV V K+ + I+ G H E T AS G +V
Sbjct: 86 GRGLKVFDATCPLVTKVHIEVAKYSRDGRECILIGHAGHPEVEGTMGQYDASNGGAIYLV 145
Query: 131 KNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKG 190
++ K+ EL + K AF+ QTT+
Sbjct: 146 EDEKDV---------AELQVHNPDKLAFV-----------------------TQTTLSMD 173
Query: 191 ETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGW 250
+T + + +T G ++ IC ATQ RQDA+ ++ +E D++LVVG
Sbjct: 174 DTSRVIDAL-RTRFPAIGGPRKDD-------ICYATQNRQDAVKQLADE-CDVVLVVGSP 224
Query: 251 NSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGIT 310
NSSN++ L+E+AE P+Y ID + + +++W G IGIT
Sbjct: 225 NSSNSNRLRELAERMATPAYLIDGAEDL-----------------QKSWF-DGVERIGIT 266
Query: 311 SGASTPDKAVEDVLKKV 327
+GAS P+ V V++++
Sbjct: 267 AGASAPEVLVRGVIQQL 283
>gi|39936795|ref|NP_949071.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Rhodopseudomonas palustris CGA009]
gi|50400884|sp|Q6N3G0.1|ISPH1_RHOPA RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1
gi|39650652|emb|CAE29175.1| penicillin tolerance protein [Rhodopseudomonas palustris CGA009]
Length = 306
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 137/317 (43%), Gaps = 70/317 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAA--VEEMVTL 74
+++ +EI+HN V + L+ A I VEE V V V A G A +EE
Sbjct: 31 VYVRHEIVHNKYVVESLK--AKGAIFVEE----LSEVPPKAVTVFSAHGVARSIEEEAA- 83
Query: 75 NNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-ASFAGKYIIVKNM 133
+++ +++ TCP V+KV +++ T I+ G H E T G ++V+N+
Sbjct: 84 -ARDLPVLNATCPLVTKVHNQGKRYTSKGRTLILIGHAGHPEVEGTMGQVPGPVLLVQNL 142
Query: 134 KEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETE 193
+ L T A++ QTT+ +T+
Sbjct: 143 DDV---------AALTLPPETPVAYI-----------------------TQTTLSVDDTK 170
Query: 194 EIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSS 253
+I + K G + IC ATQ RQ A+ +M + VDLILVVG NSS
Sbjct: 171 DIIVALSKKFHDIEGPDT--------RDICYATQNRQSAVRQM-SKLVDLILVVGANNSS 221
Query: 254 NTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGA 313
N++ L+EI + GIPSY I + P WL G+ +GIT+GA
Sbjct: 222 NSNRLREIGTEAGIPSYLIADGSELDPA-----------------WL-DGKKAVGITAGA 263
Query: 314 STPDKAVEDVLKKVFEI 330
S P+ V+DV++ + I
Sbjct: 264 SAPEVLVDDVIEALRRI 280
>gi|400537583|ref|ZP_10801105.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
colombiense CECT 3035]
gi|400328627|gb|EJO86138.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
colombiense CECT 3035]
Length = 308
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 132/319 (41%), Gaps = 75/319 (23%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V LE+ + ++ D V +G +VV A G A
Sbjct: 31 VYVRHEIVHNRHVVTTLEKAGAVFV------EETDEVPEGAIVVFSAHGVAPTVHAAAAE 84
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+N+ +D TCP V+KV + + DY ++ G HEE V TA A ++ +
Sbjct: 85 RNLHTIDATCPLVTKVHNEARRFARNDYDILLIGHEGHEEVVGTAGEAPDHVQL------ 138
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
++G ++ + K V +QTT+ ET EI
Sbjct: 139 -----------VDGVAAVDNVTVRDENKVV--------------WLSQTTLSVDETMEI- 172
Query: 197 KLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGGWN 251
VE + E F + IC ATQ RQ A+ M E +L++VVG N
Sbjct: 173 ------------VERLRERFPKLQDPPSDDICYATQNRQVAVKAMAPE-CELVIVVGSRN 219
Query: 252 SSNTSHLQEI-AEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGIT 310
SSN+ L E+ ++ +D I P WL +G T+G+T
Sbjct: 220 SSNSVRLVEVALGGGAAAAHLVDWADDIDPA-----------------WL-EGVTTVGVT 261
Query: 311 SGASTPDKAVEDVLKKVFE 329
SGAS P+ VE VL ++ E
Sbjct: 262 SGASVPEVLVEGVLSRLAE 280
>gi|262163903|ref|ZP_06031642.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio mimicus
VM223]
gi|262027431|gb|EEY46097.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio mimicus
VM223]
Length = 316
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 139/318 (43%), Gaps = 67/318 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L++ + + ++ V ++V+ A G +
Sbjct: 33 IYVRHEVVHNRFVVEGLKQRGARFV------EELSEVPNDNIVIFSAHGVSQAVRQEAKE 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT----ASFAGKYIIVKN 132
+++ + D TCP V+KV V + + ++ G H E T AS G +V+
Sbjct: 87 RSLTVFDATCPLVTKVHMEVARASRKHMEVVLIGHAGHPEVEGTMGQYASDTGGMYLVEK 146
Query: 133 MKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGET 192
++ E N S K DP + +QTT+ ET
Sbjct: 147 PEDVE-----------NLQSQVK---------------DPS----NLHYVSQTTLSVDET 176
Query: 193 EEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNS 252
++ + + + G + IC ATQ RQDA+ +++ ++VD+++VVG NS
Sbjct: 177 ADVIDELRRVFPKIQGPRK--------DDICYATQNRQDAV-RILAQQVDVMVVVGSKNS 227
Query: 253 SNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSG 312
SN++ L+E+AE G P Y D + I P W ++ +G+T+G
Sbjct: 228 SNSTRLKELAEKLGTPGYLTDCPQDIHP-----------------EWFENARL-VGVTAG 269
Query: 313 ASTPDKAVEDVLKKVFEI 330
AS P++ V +L ++ E+
Sbjct: 270 ASAPEELVNQILDRIKEL 287
>gi|317050910|ref|YP_004112026.1| hydroxymethylbutenyl pyrophosphate reductase [Desulfurispirillum
indicum S5]
gi|316945994|gb|ADU65470.1| hydroxymethylbutenyl pyrophosphate reductase [Desulfurispirillum
indicum S5]
Length = 289
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 139/320 (43%), Gaps = 67/320 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGD-VVVLPAFGAAVEEMVTLN 75
I+ IIHNP V ++L+ + V+ + +V N + V++ + G +
Sbjct: 33 IYTLGPIIHNPQVVEKLDSLGVREV-----SDLDEVANPSESAVIIRSHGVGPQVYDRAL 87
Query: 76 NKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKE 135
V + D TCP+V ++ + V +Y +I G+ H E VA ++AG++ +V
Sbjct: 88 AMGVAVEDATCPYVKRIHSIVTDLVAQEYQVLIVGEPDHPEVVAIKAYAGEHGVV----- 142
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
E+ D LE K A K G+ QTT + E++
Sbjct: 143 VEHPSD-----------------LESIKLAR-----------KTGVVAQTTQSQ---EKL 171
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
++V + ++ N FNTICDAT RQ ++ D++LV+GG S NT
Sbjct: 172 QQVVSALLAKR------NSEVRIFNTICDATDVRQKEAVEIASGS-DVVLVIGGRKSGNT 224
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L EI +Y I++ + + W +G+ +GIT+GAST
Sbjct: 225 NRLAEICIGIQPDTYHIETAAEL-----------------QTEWF-RGKQRVGITAGAST 266
Query: 316 PDKAVEDVLKKVFEIKREEA 335
PD + +V++ + I RE +
Sbjct: 267 PDYLISEVIEVLQRISRENS 286
>gi|254249634|ref|ZP_04942954.1| LytB protein [Burkholderia cenocepacia PC184]
gi|124876135|gb|EAY66125.1| LytB protein [Burkholderia cenocepacia PC184]
Length = 329
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 133/309 (43%), Gaps = 66/309 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V + L + + ++ D V G V + A G A
Sbjct: 49 VYVRHEIVHNRHVVENLRNKGARFV------EELDEVPHGAVAIFSAHGVAQTVERDAQT 102
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKE 135
+ + ++D TCP V+KV ++ I+ G H E T + I+V++ E
Sbjct: 103 RGLDVLDATCPLVTKVHVQGRQYVAAGRRLILIGHAGHPEVEGTIGQIPAEVILVQSEAE 162
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
+ L T A++ QTT+ +T I
Sbjct: 163 VDT---------LTLPVDTPVAYI-----------------------TQTTLSVDDTRGI 190
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
+ +++ G + + IC ATQ RQ A+ ++ E+VD++LVVG NSSN+
Sbjct: 191 IEALQRRFTDIVGPDTRD--------ICYATQNRQAAVREL-SEQVDVLLVVGATNSSNS 241
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L+EI + G+PSY + G+++ K W G T+G+T+GAS
Sbjct: 242 NRLREIGTESGVPSYLVAD------GSEV-----------KAEWF-AGVQTVGLTAGASA 283
Query: 316 PDKAVEDVL 324
P++ VEDV+
Sbjct: 284 PEEMVEDVI 292
>gi|3892229|gb|AAC78334.1| LytB [Burkholderia pseudomallei 1026b]
Length = 313
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 135/312 (43%), Gaps = 66/312 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V + L + + ++ D V G V + A G A
Sbjct: 33 VYVRHEIVHNRHVVENLRNKGARFV------EELDEVPHGAVAIFSAHGVAQTVEQDAQA 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKE 135
+ + ++D TCP V+KV ++ I+ G H E T + I+V++ E
Sbjct: 87 RGLDVLDATCPLVTKVHVQGRQYVAAGRRLILIGHAGHPEVEGTIGQIPAEVILVQSEAE 146
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
+ L + T A++ QTT+ +T I
Sbjct: 147 VDT---------LTLPADTPVAYV-----------------------TQTTLSVDDTRGI 174
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
+ +++ G + + IC ATQ RQ A+ ++ E+VD++LVVG NSSN+
Sbjct: 175 IEALQRRFTDIVGPDTRD--------ICYATQNRQAAVREL-SEQVDVLLVVGATNSSNS 225
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L+EI + G+PSY + G+++ + W + T+G+T+GAS
Sbjct: 226 NRLREIGTESGVPSYLVAD------GSEV-----------RAEWFANAR-TVGLTAGASA 267
Query: 316 PDKAVEDVLKKV 327
P++ VEDV+ +
Sbjct: 268 PEEMVEDVIAAL 279
>gi|238019394|ref|ZP_04599820.1| hypothetical protein VEIDISOL_01258 [Veillonella dispar ATCC 17748]
gi|237864093|gb|EEP65383.1| hypothetical protein VEIDISOL_01258 [Veillonella dispar ATCC 17748]
Length = 632
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 142/318 (44%), Gaps = 81/318 (25%)
Query: 14 EEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVL-----PAFGAAV 68
E K + IIHNP V RLE V P++E +++G +++ PA A
Sbjct: 29 EGKSYTLGPIIHNPQVVGRLESKGVS--PIQEVAD----IDEGTMIIRSHGVGPAIYAEA 82
Query: 69 EEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAG-KY 127
EE K + I+D TCP V K + + T +I G+ +H E + +A +
Sbjct: 83 EE------KGLHILDATCPHVKKAQQDAKSVIEDGMTLVILGEKNHPEVKSINLWANNRG 136
Query: 128 IIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTM 187
II+++ + AE K +EK G+ QTT
Sbjct: 137 IIIEDEESAE-----------------KLQIVEKM-----------------GVVVQTTF 162
Query: 188 LKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV 247
+ + I +++EK +++ F TIC+ATQERQ++ + VDL++V+
Sbjct: 163 SQFKFNSIIEILEKK----------SKNLKIFKTICNATQERQNSAVDLAR-NVDLMIVI 211
Query: 248 GGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITI 307
GG NS NT+ L E+ D G +Y I++ + + W + Q T+
Sbjct: 212 GGKNSGNTNRLAEVCRDVGCTTYHIETSTEL-----------------QLEWFNRVQ-TV 253
Query: 308 GITSGASTPDKAVEDVLK 325
G+T+GASTPD +++V++
Sbjct: 254 GVTAGASTPDWIIKEVIE 271
>gi|354596110|ref|ZP_09014127.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Brenneria sp.
EniD312]
gi|353674045|gb|EHD20078.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Brenneria sp.
EniD312]
Length = 316
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 139/322 (43%), Gaps = 61/322 (18%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L E I +Q V G +++ A G + N
Sbjct: 33 IYVRHEVVHNRYVVNGLRERGAIFI------EQIGDVPDGSILIFSAHGVSQAVRAEAKN 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++ + D TCP V+KV V + + +I+ G H E T G+Y N +
Sbjct: 87 RDLTVFDATCPLVTKVHMEVARASRKGVEAILIGHAGHPEVEGTM---GQY---SNARGG 140
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
Y+ + S ++ + + K + F QTT+ +T +
Sbjct: 141 MYLVE-----------SPEDVWRLQVKDENNLCF-----------MTQTTLSVDDTSAVI 178
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+ + R G + IC AT RQ+A+ + E D++LVVG NSSN++
Sbjct: 179 DALRERFPRIIGPRK--------DDICYATTNRQEAVRNLATEA-DVVLVVGSRNSSNSN 229
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L E+A+ G +Y ID+ I +E+WL G +G+T+GAS P
Sbjct: 230 RLAELAQRAGKAAYLIDAAADI-----------------QESWL-SGITRVGVTAGASAP 271
Query: 317 DKAVEDVLKKVFEIKREEALQL 338
D V+ V++++ + E A+++
Sbjct: 272 DILVQQVIERLQALGGEIAVEM 293
>gi|94501192|ref|ZP_01307714.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Bermanella
marisrubri]
gi|94426619|gb|EAT11605.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Oceanobacter
sp. RED65]
Length = 314
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 141/317 (44%), Gaps = 60/317 (18%)
Query: 14 EEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVT 73
E I++ +E++HN V L + + + V +V+ A G +
Sbjct: 30 EPPIYVRHEVVHNKFVVDNLRDRGAVFV------DELHEVPDDSIVIFSAHGVSKAVQKE 83
Query: 74 LNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNM 133
++ +++ D TCP V+KV V ++ K I+ G H E T G+Y
Sbjct: 84 AADRGLKVFDATCPLVTKVHMEVTRYAKKGSEVILIGHKGHPEVEGTM---GQY------ 134
Query: 134 KEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETE 193
D+ GGE+ +L + +A + +P+ + + +QTT+ +T
Sbjct: 135 -------DHSAGGEI---------YLVE-DEADVQALEPN-NPNALAYVSQTTLSMDDT- 175
Query: 194 EIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSS 253
+V K + +KF N H + IC ATQ RQDA+ K + + DLILVVG NSS
Sbjct: 176 ---AIVIKALRKKFP----NIHGPKTDDICYATQNRQDAV-KDLASQCDLILVVGSPNSS 227
Query: 254 NTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGA 313
N++ L+E+ E +Y ID+ ++I W + +GIT+GA
Sbjct: 228 NSNRLRELGERMNAQAYLIDNAEQIDAA-----------------WF-NDETKVGITAGA 269
Query: 314 STPDKAVEDVLKKVFEI 330
S P+ V+ V+ +V E+
Sbjct: 270 SAPEILVQQVVSRVQEL 286
>gi|420908819|ref|ZP_15372135.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 6G-0125-R]
gi|420915209|ref|ZP_15378514.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 6G-0125-S]
gi|420921390|ref|ZP_15384687.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 6G-0728-S]
gi|420926088|ref|ZP_15389375.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 6G-1108]
gi|420965559|ref|ZP_15428774.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 3A-0810-R]
gi|420976438|ref|ZP_15439622.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 6G-0212]
gi|420981815|ref|ZP_15444987.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 6G-0728-R]
gi|421005970|ref|ZP_15469086.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 3A-0119-R]
gi|421011683|ref|ZP_15474779.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 3A-0122-R]
gi|421016604|ref|ZP_15479673.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 3A-0122-S]
gi|421022051|ref|ZP_15485100.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 3A-0731]
gi|421027667|ref|ZP_15490705.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 3A-0930-R]
gi|421032817|ref|ZP_15495840.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 3A-0930-S]
gi|392122893|gb|EIU48655.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 6G-0125-S]
gi|392125279|gb|EIU51037.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 6G-0125-R]
gi|392131226|gb|EIU56972.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 6G-0728-S]
gi|392140613|gb|EIU66342.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 6G-1108]
gi|392172279|gb|EIU97951.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 6G-0212]
gi|392175217|gb|EIV00880.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 6G-0728-R]
gi|392203440|gb|EIV29034.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 3A-0119-R]
gi|392212156|gb|EIV37721.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 3A-0122-R]
gi|392216374|gb|EIV41918.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 3A-0731]
gi|392217226|gb|EIV42765.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 3A-0122-S]
gi|392231726|gb|EIV57232.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 3A-0930-S]
gi|392232284|gb|EIV57785.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 3A-0930-R]
gi|392258033|gb|EIV83481.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 3A-0810-R]
Length = 322
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 139/319 (43%), Gaps = 75/319 (23%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V L + I V+E D V +G +VV A G A
Sbjct: 42 VYVRHEIVHNRYVVDTLAKAGA--IFVDE----TDEVPEGAIVVFSAHGVAPTVHEKAAE 95
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+N++ +D TCP V+KV ++ + D+ ++ G HEE + TA A ++ +
Sbjct: 96 RNLKTIDATCPLVTKVHQEAKRFARDDFDILLIGHEGHEEVIGTAGEAPDHVQL------ 149
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
++G ++ + D KV +QTT+ ET E
Sbjct: 150 -----------VDGPNAVDNVTVR--------------DENKVIWLSQTTLSVDETMET- 183
Query: 197 KLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGGWN 251
V+ + E F + + IC ATQ RQ A+ M E +L++VVG N
Sbjct: 184 ------------VQRLRERFPTLQDPPSDDICYATQNRQVAVKAMAPE-CELVIVVGSRN 230
Query: 252 SSNTSHLQEIAEDRGI-PSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGIT 310
SSN+ L E+A + G SY +D + I P WL +G T+G+T
Sbjct: 231 SSNSVRLVEVALNAGSRASYLVDYAEDIDPA-----------------WL-EGVTTVGVT 272
Query: 311 SGASTPDKAVEDVLKKVFE 329
SGAS P+ V VL+++ E
Sbjct: 273 SGASVPEVLVRGVLERLAE 291
>gi|449144131|ref|ZP_21774948.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio mimicus
CAIM 602]
gi|449080231|gb|EMB51148.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio mimicus
CAIM 602]
Length = 316
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 141/318 (44%), Gaps = 67/318 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L++ + + ++ V ++V+ A G +
Sbjct: 33 IYVRHEVVHNRFVVEGLKQRGARFV------EELSEVPNDNIVIFSAHGVSQAVRQEAKE 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++ + D TCP V+KV V + + ++ G H E T G+Y
Sbjct: 87 RSLTVFDATCPLVTKVHMEVARASRKHMEVVLIGHAGHPEVEGTM---GQY--------- 134
Query: 137 EYVCDYILGGELNGSSSTKEAFL-EKFKKAVS---KGFDPDVDLVKVGIANQTTMLKGET 192
+S T +L EK + VS K DP + +QTT+ ET
Sbjct: 135 --------------ASDTGGMYLVEKPEDVVSLQAKVKDPS----HLHYVSQTTLSVDET 176
Query: 193 EEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNS 252
++ + + + G + IC ATQ RQDA+ +++ ++VD+++VVG NS
Sbjct: 177 ADVIDELRRVFPKIQGPRK--------DDICYATQNRQDAV-RILAQQVDVMVVVGSKNS 227
Query: 253 SNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSG 312
SN++ L+E+AE G P Y D + I P W ++ +G+T+G
Sbjct: 228 SNSTRLKELAEKLGTPGYLTDCPQDIHP-----------------EWFENARL-VGVTAG 269
Query: 313 ASTPDKAVEDVLKKVFEI 330
AS P++ V +L ++ E+
Sbjct: 270 ASAPEELVNQILDRIKEL 287
>gi|397678906|ref|YP_006520441.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
massiliense str. GO 06]
gi|418248948|ref|ZP_12875270.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 47J26]
gi|419711449|ref|ZP_14238912.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus M93]
gi|419715298|ref|ZP_14242703.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus M94]
gi|353450603|gb|EHB98997.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 47J26]
gi|382938771|gb|EIC63100.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus M93]
gi|382944067|gb|EIC68376.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus M94]
gi|395457171|gb|AFN62834.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
massiliense str. GO 06]
Length = 337
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 139/319 (43%), Gaps = 75/319 (23%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V L + I V+E D V +G +VV A G A
Sbjct: 57 VYVRHEIVHNRYVVDTLAKAGA--IFVDE----TDEVPEGAIVVFSAHGVAPTVHEKAAE 110
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+N++ +D TCP V+KV ++ + D+ ++ G HEE + TA A ++ +
Sbjct: 111 RNLKTIDATCPLVTKVHQEAKRFARDDFDILLIGHEGHEEVIGTAGEAPDHVQL------ 164
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
++G ++ + D KV +QTT+ ET E
Sbjct: 165 -----------VDGPNAVDNVTVR--------------DENKVIWLSQTTLSVDETMET- 198
Query: 197 KLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGGWN 251
V+ + E F + + IC ATQ RQ A+ M E +L++VVG N
Sbjct: 199 ------------VQRLRERFPTLQDPPSDDICYATQNRQVAVKAMAPE-CELVIVVGSRN 245
Query: 252 SSNTSHLQEIAEDRGI-PSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGIT 310
SSN+ L E+A + G SY +D + I P WL +G T+G+T
Sbjct: 246 SSNSVRLVEVALNAGSRASYLVDYAEDIDPA-----------------WL-EGVTTVGVT 287
Query: 311 SGASTPDKAVEDVLKKVFE 329
SGAS P+ V VL+++ E
Sbjct: 288 SGASVPEVLVRGVLERLAE 306
>gi|124383217|ref|YP_001025069.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
mallei NCTC 10229]
gi|126446749|ref|YP_001079413.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
mallei NCTC 10247]
gi|254356178|ref|ZP_04972455.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia mallei
2002721280]
gi|126239603|gb|ABO02715.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
mallei NCTC 10247]
gi|148025161|gb|EDK83330.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia mallei
2002721280]
gi|261827183|gb|ABN00397.2| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
mallei NCTC 10229]
Length = 313
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 135/312 (43%), Gaps = 66/312 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V + L + + ++ D V G V + A G A
Sbjct: 33 VYVRHEIVHNRHVVENLRNKGARFV------EELDEVPHGAVAIFSAHGVAQTVEQDAQA 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKE 135
+ + ++D TCP V+KV ++ I+ G H E T + I+V++ E
Sbjct: 87 RGLDVLDATCPLVTKVHVQGRQYVAAGRRLILIGHAGHPEVEGTIGQIPAEVILVQSEAE 146
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
+ L + T A++ QTT+ +T I
Sbjct: 147 VDT---------LTLPADTPVAYV-----------------------TQTTLSVDDTRGI 174
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
+ +++ G + + IC ATQ RQ A+ ++ E+VD++LVVG NSSN+
Sbjct: 175 IEALQRRFTDIVGPDTRD--------ICYATQNRQAAVREL-SEQVDVLLVVGATNSSNS 225
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L+EI + G+PSY + G+++ + W + T+G+T+GAS
Sbjct: 226 NRLREIGTESGVPSYLVAD------GSEV-----------RAEWFANAR-TVGLTAGASA 267
Query: 316 PDKAVEDVLKKV 327
P++ VEDV+ +
Sbjct: 268 PEEMVEDVIAAL 279
>gi|398980967|ref|ZP_10689199.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pseudomonas sp. GM25]
gi|398133998|gb|EJM23174.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pseudomonas sp. GM25]
Length = 314
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 136/316 (43%), Gaps = 70/316 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L I VEE D V +V+ A G +
Sbjct: 33 IYVRHEVVHNKFVVEDLRSRGA--IFVEE----LDQVPDDVIVIFSAHGVSQAVRTEAAG 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-----ASFAGKYIIVK 131
+ +++ D TCP V+KV V K+ + I+ G H E T AS G +V+
Sbjct: 87 RGLKVFDATCPLVTKVHIEVAKYSRDGRECILIGHAGHPEVEGTMGQYDASNGGAIYLVE 146
Query: 132 NMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGE 191
+ K+ EL + K AF+ QTT+ +
Sbjct: 147 DEKDV---------AELQVHNPDKLAFV-----------------------TQTTLSMDD 174
Query: 192 TEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWN 251
T + + +T G ++ IC ATQ RQDA+ ++ +E D++LVVG N
Sbjct: 175 TSRVIDAL-RTRFPAIGGPRKDD-------ICYATQNRQDAVKQLADE-CDVVLVVGSPN 225
Query: 252 SSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITS 311
SSN++ L+E+AE P+Y ID + + +++W G IGIT+
Sbjct: 226 SSNSNRLRELAERMATPAYLIDGAEDL-----------------QKSWF-DGVERIGITA 267
Query: 312 GASTPDKAVEDVLKKV 327
GAS P+ V V++++
Sbjct: 268 GASAPEVLVRGVIQQL 283
>gi|399017937|ref|ZP_10720126.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Herbaspirillum sp. CF444]
gi|398102704|gb|EJL92884.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Herbaspirillum sp. CF444]
Length = 320
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 144/328 (43%), Gaps = 69/328 (21%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
I A QF I++ +EI+HN V L I +EE V G+ V+ A
Sbjct: 26 IVERALTQF-GAPIYVRHEIVHNAYVVADLRSKGA--IFIEE----LADVPAGNTVIFSA 78
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATA-- 121
G + + + + D TCP V+KV V K ++ I+ G H E T
Sbjct: 79 HGVSKAVQAEALERGLAVFDATCPLVTKVHMEVAKMRREGREIIMIGHEGHPEVEGTMGQ 138
Query: 122 SFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGI 181
+ AG Y++ E + K AV+ DPD+ +
Sbjct: 139 TEAGMYLV--------------------------ETVDDVMKLAVT---DPDL----LAY 165
Query: 182 ANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKV 241
+QTT+ +T +I + KF N+ E IC AT RQ+A+ K + +V
Sbjct: 166 VSQTTLSVDDTTDI----IAALKSKF--PNIAEP--KKGDICYATTNRQEAV-KFMAPQV 216
Query: 242 DLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLP 301
D+++VVG NSSN++ L+E+AE +G+P+Y +D+ I +WL
Sbjct: 217 DVVIVVGSPNSSNSNRLREVAEKKGVPAYMVDNADLI-----------------NADWL- 258
Query: 302 KGQITIGITSGASTPDKAVEDVLKKVFE 329
G+ IG+T+GAS P+ V+ V+ ++ E
Sbjct: 259 VGKKRIGVTAGASAPEVLVQAVIDRLKE 286
>gi|85859633|ref|YP_461835.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Syntrophus
aciditrophicus SB]
gi|85722724|gb|ABC77667.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Syntrophus
aciditrophicus SB]
Length = 577
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 140/319 (43%), Gaps = 65/319 (20%)
Query: 14 EEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVT 73
EKI+ +IHNP + L E + IP+++ + ++ +V+ A G + E
Sbjct: 31 SEKIYTYGPLIHNPQTVEFLRERGI--IPIKD-IEALSASDQNAAIVIRAHGISPSERKK 87
Query: 74 LNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNM 133
+ NK ++I+D TCP V+ V + +H DY +I G H E V +
Sbjct: 88 IRNKGLRIIDATCPKVTHVQAIIRQHAAKDYNILIIGDGDHPE-------------VNGL 134
Query: 134 KEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETE 193
++G N +E+ P ++ KV + QTT E
Sbjct: 135 LGHAGGHGRVIGSLQN---------VEEL---------PIME--KVCVVAQTTQ---NVE 171
Query: 194 EIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSS 253
E +V + + + + FNTICD+T++RQ A + + +++ +++VGG NS+
Sbjct: 172 EYAAIVRR-------IRDRFPETVVFNTICDSTEQRQ-AEVRELAARMEAMVIVGGRNSA 223
Query: 254 NTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGA 313
NT L ++ +G P++ I++ + Y IG+++GA
Sbjct: 224 NTRRLAALSSQQGTPTFHIETADELNDAKLAPYD------------------RIGLSAGA 265
Query: 314 STPDKAVEDVLKKVFEIKR 332
STP+ ++ V+ ++ E +R
Sbjct: 266 STPNWIIDRVVDRIAEQQR 284
>gi|53716137|ref|YP_106485.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
mallei ATCC 23344]
gi|53723184|ref|YP_112169.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei K96243]
gi|76818269|ref|YP_336443.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 1710b]
gi|121596456|ref|YP_990579.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
mallei SAVP1]
gi|126443459|ref|YP_001064045.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 668]
gi|126458046|ref|YP_001076958.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 1106a]
gi|134281748|ref|ZP_01768455.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 305]
gi|167004130|ref|ZP_02269900.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
mallei PRL-20]
gi|167725214|ref|ZP_02408450.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei DM98]
gi|167744144|ref|ZP_02416918.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 14]
gi|167821342|ref|ZP_02453022.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 91]
gi|167829682|ref|ZP_02461153.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 9]
gi|167851153|ref|ZP_02476661.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei B7210]
gi|167899784|ref|ZP_02487185.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 7894]
gi|167908100|ref|ZP_02495305.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei NCTC 13177]
gi|167916446|ref|ZP_02503537.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 112]
gi|167924301|ref|ZP_02511392.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei BCC215]
gi|217424406|ref|ZP_03455905.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 576]
gi|226194015|ref|ZP_03789616.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei Pakistan 9]
gi|237508022|ref|ZP_04520737.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei MSHR346]
gi|238563775|ref|ZP_00438301.2| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
mallei GB8 horse 4]
gi|242312498|ref|ZP_04811515.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 1106b]
gi|254175987|ref|ZP_04882645.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia mallei
ATCC 10399]
gi|254182612|ref|ZP_04889206.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 1655]
gi|254187164|ref|ZP_04893679.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei Pasteur 52237]
gi|254203495|ref|ZP_04909856.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia mallei
FMH]
gi|254205371|ref|ZP_04911724.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia mallei
JHU]
gi|254264609|ref|ZP_04955474.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 1710a]
gi|254296456|ref|ZP_04963912.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 406e]
gi|386865993|ref|YP_006278941.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 1026b]
gi|403524160|ref|YP_006659729.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei BPC006]
gi|418397520|ref|ZP_12971204.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 354a]
gi|418538388|ref|ZP_13104002.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 1026a]
gi|418544532|ref|ZP_13109816.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 1258a]
gi|418551377|ref|ZP_13116295.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 1258b]
gi|418557019|ref|ZP_13121623.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 354e]
gi|55977894|sp|Q9ZFL0.2|ISPH2_BURPS RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2
gi|71152164|sp|Q629Z7.1|ISPH1_BURMA RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1
gi|52213598|emb|CAH39652.1| IspH protein [Burkholderia pseudomallei K96243]
gi|52422107|gb|AAU45677.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia mallei
ATCC 23344]
gi|76582742|gb|ABA52216.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 1710b]
gi|121224254|gb|ABM47785.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia mallei
SAVP1]
gi|126222950|gb|ABN86455.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 668]
gi|126231814|gb|ABN95227.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 1106a]
gi|134246810|gb|EBA46897.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 305]
gi|147745734|gb|EDK52813.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia mallei
FMH]
gi|147754957|gb|EDK62021.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia mallei
JHU]
gi|157806507|gb|EDO83677.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 406e]
gi|157934847|gb|EDO90517.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei Pasteur 52237]
gi|160697029|gb|EDP86999.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia mallei
ATCC 10399]
gi|184213147|gb|EDU10190.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 1655]
gi|217392871|gb|EEC32894.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 576]
gi|225933960|gb|EEH29946.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei Pakistan 9]
gi|235000227|gb|EEP49651.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei MSHR346]
gi|238519988|gb|EEP83452.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
mallei GB8 horse 4]
gi|242135737|gb|EES22140.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 1106b]
gi|243060460|gb|EES42646.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
mallei PRL-20]
gi|254215611|gb|EET04996.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 1710a]
gi|385348049|gb|EIF54689.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 1026a]
gi|385348284|gb|EIF54914.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 1258b]
gi|385348650|gb|EIF55252.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 1258a]
gi|385365778|gb|EIF71438.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 354e]
gi|385368479|gb|EIF73926.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 354a]
gi|385663121|gb|AFI70543.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei 1026b]
gi|403079227|gb|AFR20806.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei BPC006]
Length = 313
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 135/312 (43%), Gaps = 66/312 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V + L + + ++ D V G V + A G A
Sbjct: 33 VYVRHEIVHNRHVVENLRNKGARFV------EELDEVPHGAVAIFSAHGVAQTVEQDAQA 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKE 135
+ + ++D TCP V+KV ++ I+ G H E T + I+V++ E
Sbjct: 87 RGLDVLDATCPLVTKVHVQGRQYVAAGRRLILIGHAGHPEVEGTIGQIPAEVILVQSEAE 146
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
+ L + T A++ QTT+ +T I
Sbjct: 147 VDT---------LTLPADTPVAYV-----------------------TQTTLSVDDTRGI 174
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
+ +++ G + + IC ATQ RQ A+ ++ E+VD++LVVG NSSN+
Sbjct: 175 IEALQRRFTDIVGPDTRD--------ICYATQNRQAAVREL-SEQVDVLLVVGATNSSNS 225
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L+EI + G+PSY + G+++ + W + T+G+T+GAS
Sbjct: 226 NRLREIGTESGVPSYLVAD------GSEV-----------RAEWFANAR-TVGLTAGASA 267
Query: 316 PDKAVEDVLKKV 327
P++ VEDV+ +
Sbjct: 268 PEEMVEDVIAAL 279
>gi|420863219|ref|ZP_15326612.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 4S-0303]
gi|420867616|ref|ZP_15331001.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 4S-0726-RA]
gi|420872048|ref|ZP_15335428.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 4S-0726-RB]
gi|420930406|ref|ZP_15393682.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
massiliense 1S-151-0930]
gi|420938842|ref|ZP_15402111.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
massiliense 1S-152-0914]
gi|420940655|ref|ZP_15403918.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
massiliense 1S-153-0915]
gi|420945639|ref|ZP_15408892.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
massiliense 1S-154-0310]
gi|420950926|ref|ZP_15414172.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
massiliense 2B-0626]
gi|420955097|ref|ZP_15418336.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
massiliense 2B-0107]
gi|420960431|ref|ZP_15423660.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
massiliense 2B-1231]
gi|420986223|ref|ZP_15449385.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 4S-0206]
gi|420991067|ref|ZP_15454219.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
massiliense 2B-0307]
gi|420996901|ref|ZP_15460041.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
massiliense 2B-0912-R]
gi|421001330|ref|ZP_15464462.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
massiliense 2B-0912-S]
gi|421038071|ref|ZP_15501082.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 4S-0116-R]
gi|421042401|ref|ZP_15505407.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 4S-0116-S]
gi|392073019|gb|EIT98859.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 4S-0726-RA]
gi|392073739|gb|EIT99577.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 4S-0303]
gi|392076237|gb|EIU02070.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 4S-0726-RB]
gi|392139424|gb|EIU65156.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
massiliense 1S-151-0930]
gi|392144357|gb|EIU70082.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
massiliense 1S-152-0914]
gi|392156131|gb|EIU81836.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
massiliense 1S-153-0915]
gi|392158847|gb|EIU84543.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
massiliense 1S-154-0310]
gi|392160703|gb|EIU86394.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
massiliense 2B-0626]
gi|392188603|gb|EIV14239.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 4S-0206]
gi|392189145|gb|EIV14779.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
massiliense 2B-0912-R]
gi|392190078|gb|EIV15710.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
massiliense 2B-0307]
gi|392201849|gb|EIV27449.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
massiliense 2B-0912-S]
gi|392226285|gb|EIV51799.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 4S-0116-R]
gi|392243405|gb|EIV68891.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 4S-0116-S]
gi|392254826|gb|EIV80289.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
massiliense 2B-1231]
gi|392255625|gb|EIV81086.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
massiliense 2B-0107]
Length = 322
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 139/319 (43%), Gaps = 75/319 (23%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V L + I V+E D V +G +VV A G A
Sbjct: 42 VYVRHEIVHNRYVVDTLAKAGA--IFVDE----TDEVPEGAIVVFSAHGVAPTVHEKAAE 95
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+N++ +D TCP V+KV ++ + D+ ++ G HEE + TA A ++ +
Sbjct: 96 RNLKTIDATCPLVTKVHQEAKRFARDDFDILLIGHEGHEEVIGTAGEAPDHVQL------ 149
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
++G ++ + D KV +QTT+ ET E
Sbjct: 150 -----------VDGPNAVDNVTVR--------------DENKVIWLSQTTLSVDETMET- 183
Query: 197 KLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGGWN 251
V+ + E F + + IC ATQ RQ A+ M E +L++VVG N
Sbjct: 184 ------------VQRLRERFPTLQDPPSDDICYATQNRQVAVKAMAPE-CELVIVVGSRN 230
Query: 252 SSNTSHLQEIAEDRGI-PSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGIT 310
SSN+ L E+A + G SY +D + I P WL +G T+G+T
Sbjct: 231 SSNSVRLVEVALNAGSRASYLVDYAEDIDPA-----------------WL-EGVTTVGVT 272
Query: 311 SGASTPDKAVEDVLKKVFE 329
SGAS P+ V VL+++ E
Sbjct: 273 SGASVPEVLVRGVLERLAE 291
>gi|365869247|ref|ZP_09408794.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
massiliense CCUG 48898 = JCM 15300]
gi|363998704|gb|EHM19910.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
massiliense CCUG 48898 = JCM 15300]
Length = 327
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 142/318 (44%), Gaps = 73/318 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V L + I V+E D V +G +VV A G A
Sbjct: 47 VYVRHEIVHNRYVVDTLAKAGA--IFVDE----TDEVPEGAIVVFSAHGVAPTVHDKAAE 100
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+N++ +D TCP V+KV ++ + D+ ++ G HEE + TA A ++ +
Sbjct: 101 RNLKTIDATCPLVTKVHQEAKRFARDDFDILLIGHEGHEEVIGTAGEAPDHVQL------ 154
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
++G ++ + D KV +QTT+ ET E
Sbjct: 155 -----------VDGPNAVDNVTVR--------------DENKVIWLSQTTLSVDETMET- 188
Query: 197 KLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGGWN 251
V+ + E F + + IC ATQ RQ A+ M E +L++VVG N
Sbjct: 189 ------------VQRLRERFPTLQDPPSDDICYATQNRQVAVKAMAPE-CELVIVVGSRN 235
Query: 252 SSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITS 311
SSN+ L E+A + G++ +Y + + E ++ E WL +G T+G+TS
Sbjct: 236 SSNSVRLVEVA---------------LNAGSRASYLVDYAEDIDPE-WL-EGVTTVGVTS 278
Query: 312 GASTPDKAVEDVLKKVFE 329
GAS P+ V VL+++ E
Sbjct: 279 GASVPEVLVRGVLERLAE 296
>gi|336420274|ref|ZP_08600510.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Fusobacterium
sp. 11_3_2]
gi|336161315|gb|EGN64321.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Fusobacterium
sp. 11_3_2]
Length = 280
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 142/311 (45%), Gaps = 61/311 (19%)
Query: 16 KIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLN 75
K +I ++HN V + ++ + + EE + D + + D+VV+ A G + + L
Sbjct: 31 KKYILGMLVHNKQVVEDMQRKGFKLVTEEELLQDVDSLEENDIVVIRAHGTSKKVHEKLK 90
Query: 76 NKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKE 135
+ V++ D TC +V+K+ +E + Y+ + G +H E SFA I ++ +E
Sbjct: 91 ERKVKVFDATCIFVNKIRQEIEIANEKGYSILFMGDRNHPEVKGVISFADDIQIFESYEE 150
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
A K K + K + ++ QTT+ K + EE+
Sbjct: 151 AT-----------------------KLKIDLDKTY---------LLSTQTTLNKRKFEEV 178
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
+KF EN ++ I F+ IC AT RQ A+ + KV+L++VVG SSNT
Sbjct: 179 ---------KKFFKENY-KNVIIFDKICGATAVRQKAVEDLAV-KVELMIVVGDTKSSNT 227
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
L EI++ +Y I++E+++ + G+ +GIT+GAST
Sbjct: 228 KKLYEISKRLNDNTYLIENEEQLDLD------------------IFSGKKVVGITAGAST 269
Query: 316 PDKAVEDVLKK 326
P++ + ++ KK
Sbjct: 270 PEETIMNIEKK 280
>gi|163802407|ref|ZP_02196300.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio sp.
AND4]
gi|159173708|gb|EDP58523.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio sp.
AND4]
Length = 321
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 144/311 (46%), Gaps = 59/311 (18%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L++ I VEE V ++V+ A G + +
Sbjct: 37 IYVRHEVVHNRFVVEGLKQRGA--IFVEE----LHEVPDNNIVIFSAHGVSQAVRQEAKS 90
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++ + D TCP V+KV V + + + ++ G H E T G+Y +
Sbjct: 91 RDLTVFDATCPLVTKVHMEVARASRRNMEVVLIGHAGHPEVEGTM---GQY-------SS 140
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
E Y++ A +E+ K V DP DL V +QTT+ ET ++
Sbjct: 141 ETGGMYLV---------ETPADVEQLKAIVK---DPS-DLHYV---SQTTLSVDETADVI 184
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+ + + G + IC ATQ RQDA+ ++ + VD+++VVG NSSN++
Sbjct: 185 EELRRVFPEIQGPRK--------DDICYATQNRQDAVRELSAD-VDVMVVVGSKNSSNST 235
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L+E+AE G P Y D + I P W +G++ +G+T+GAS P
Sbjct: 236 RLKELAEKLGTPGYLTDCPEDIKP-----------------EWF-EGKVKVGVTAGASAP 277
Query: 317 DKAVEDVLKKV 327
++ V +L+++
Sbjct: 278 EELVNQILERI 288
>gi|107027644|ref|YP_625155.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
cenocepacia AU 1054]
gi|116693645|ref|YP_839178.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
cenocepacia HI2424]
gi|170737080|ref|YP_001778340.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
cenocepacia MC0-3]
gi|105897018|gb|ABF80182.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
cenocepacia AU 1054]
gi|116651645|gb|ABK12285.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
cenocepacia HI2424]
gi|169819268|gb|ACA93850.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia
cenocepacia MC0-3]
Length = 313
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 132/309 (42%), Gaps = 66/309 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V + L + + ++ D V G V + A G A
Sbjct: 33 VYVRHEIVHNRHVVENLRNKGARFV------EELDEVPHGAVAIFSAHGVAQTVERDAQT 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKE 135
+ + ++D TCP V+KV ++ I+ G H E T + I+V++ E
Sbjct: 87 RGLDVLDATCPLVTKVHVQGRQYVAAGRRLILIGHAGHPEVEGTIGQIPAEVILVQSEAE 146
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
+ L T A++ QTT+ +T I
Sbjct: 147 VDT---------LTLPVDTPVAYI-----------------------TQTTLSVDDTRGI 174
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
+ +++ G + IC ATQ RQ A+ ++ E+VD++LVVG NSSN+
Sbjct: 175 IEALQRRFTDIVGPDT--------RDICYATQNRQAAVREL-SEQVDVLLVVGATNSSNS 225
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L+EI + G+PSY + G+++ K W G T+G+T+GAS
Sbjct: 226 NRLREIGTESGVPSYLVAD------GSEV-----------KAEWF-AGVQTVGLTAGASA 267
Query: 316 PDKAVEDVL 324
P++ VEDV+
Sbjct: 268 PEEMVEDVI 276
>gi|398850125|ref|ZP_10606833.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pseudomonas sp. GM80]
gi|398249487|gb|EJN34873.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pseudomonas sp. GM80]
Length = 314
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 136/321 (42%), Gaps = 80/321 (24%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L I VEE D V +V+ A G +
Sbjct: 33 IYVRHEVVHNKFVVEDLRSRGA--IFVEE----LDQVPDDVIVIFSAHGVSQAVRTEAAG 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-----ASFAGKYIIVK 131
+ +++ D TCP V+KV V K+ + I+ G H E T AS G +V+
Sbjct: 87 RGLKVFDATCPLVTKVHIEVAKYSRDGRECILIGHAGHPEVEGTMGQYDASNGGAIYLVE 146
Query: 132 NMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGE 191
+ K+ EL + K AF+ QTT+ +
Sbjct: 147 DEKDV---------AELQVHNPDKLAFV-----------------------TQTTLSMDD 174
Query: 192 TEEIGKLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILV 246
T + ++ + F + + IC ATQ RQDA+ ++ +E D++LV
Sbjct: 175 TSRV-------------IDALRSRFPAIGGPRKDDICYATQNRQDAVKQLADE-CDVVLV 220
Query: 247 VGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQIT 306
VG NSSN++ L+E+AE P+Y ID + + +++W G
Sbjct: 221 VGSPNSSNSNRLRELAERMATPAYLIDGAEDL-----------------QKSWF-DGVER 262
Query: 307 IGITSGASTPDKAVEDVLKKV 327
IGIT+GAS P+ V V++++
Sbjct: 263 IGITAGASAPEVLVRGVIQQL 283
>gi|254192370|ref|ZP_04898809.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei S13]
gi|169649128|gb|EDS81821.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
pseudomallei S13]
Length = 335
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 135/312 (43%), Gaps = 66/312 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V + L + + ++ D V G V + A G A
Sbjct: 55 VYVRHEIVHNRHVVENLRNKGARFV------EELDEVPHGAVAIFSAHGVAQTVEQDAQA 108
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKE 135
+ + ++D TCP V+KV ++ I+ G H E T + I+V++ E
Sbjct: 109 RGLDVLDATCPLVTKVHVQGRQYVAAGRRLILIGHAGHPEVEGTIGQIPAEVILVQSEAE 168
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
+ L + T A++ QTT+ +T I
Sbjct: 169 VDT---------LTLPADTPVAYV-----------------------TQTTLSVDDTRGI 196
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
+ +++ G + + IC ATQ RQ A+ ++ E+VD++LVVG NSSN+
Sbjct: 197 IEALQRRFTDIVGPDTRD--------ICYATQNRQAAVREL-SEQVDVLLVVGATNSSNS 247
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L+EI + G+PSY + G+++ + W + T+G+T+GAS
Sbjct: 248 NRLREIGTESGVPSYLVAD------GSEV-----------RAEWFANAR-TVGLTAGASA 289
Query: 316 PDKAVEDVLKKV 327
P++ VEDV+ +
Sbjct: 290 PEEMVEDVIAAL 301
>gi|418419497|ref|ZP_12992680.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus subsp. bolletii BD]
gi|364001127|gb|EHM22323.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus subsp. bolletii BD]
Length = 327
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 139/319 (43%), Gaps = 75/319 (23%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V L + I V+E D V +G +VV A G A
Sbjct: 47 VYVRHEIVHNRYVVDTLAKAGA--IFVDE----TDEVPEGAIVVFSAHGVAPTVHEKAAE 100
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+N++ +D TCP V+KV ++ + D+ ++ G HEE + TA A ++ +
Sbjct: 101 RNLKTIDATCPLVTKVHQEAKRFARDDFDILLIGHEGHEEVIGTAGEAPDHVQL------ 154
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
++G ++ + D KV +QTT+ ET E
Sbjct: 155 -----------VDGPNAVDNVTVR--------------DENKVIWLSQTTLSVDETMET- 188
Query: 197 KLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGGWN 251
V+ + E F + + IC ATQ RQ A+ M E +L++VVG N
Sbjct: 189 ------------VQRLRERFPTLQDPPSDDICYATQNRQVAVKAMAPE-CELVIVVGSRN 235
Query: 252 SSNTSHLQEIAEDRGI-PSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGIT 310
SSN+ L E+A + G SY +D + I P WL +G T+G+T
Sbjct: 236 SSNSVRLVEVALNAGSRASYLVDYAEDIDPA-----------------WL-EGVTTVGVT 277
Query: 311 SGASTPDKAVEDVLKKVFE 329
SGAS P+ V VL+++ E
Sbjct: 278 SGASVPEVLVRGVLERLAE 296
>gi|169628350|ref|YP_001701999.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus ATCC 19977]
gi|169240317|emb|CAM61345.1| Probable 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Mycobacterium abscessus]
Length = 337
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 139/319 (43%), Gaps = 75/319 (23%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V L + I V+E D V +G +VV A G A
Sbjct: 57 VYVRHEIVHNRYVVDTLAKAGA--IFVDE----TDEVPEGAIVVFSAHGVAPTVHEKAAE 110
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+N++ +D TCP V+KV ++ + D+ ++ G HEE + TA A ++ +
Sbjct: 111 RNLKTIDATCPLVTKVHQEAKRFARDDFDILLIGHEGHEEVIGTAGEAPDHVQL------ 164
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
++G ++ + D KV +QTT+ ET E
Sbjct: 165 -----------VDGPNAVDNVTVR--------------DENKVIWLSQTTLSVDETMET- 198
Query: 197 KLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGGWN 251
V+ + E F + + IC ATQ RQ A+ M E +L++VVG N
Sbjct: 199 ------------VQRLRERFPTLQDPPSDDICYATQNRQVAVKAMAPE-CELVIVVGSRN 245
Query: 252 SSNTSHLQEIAEDRGI-PSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGIT 310
SSN+ L E+A + G SY +D + I P WL +G T+G+T
Sbjct: 246 SSNSVRLVEVALNAGSRASYLVDYAEDIDPA-----------------WL-EGVTTVGVT 287
Query: 311 SGASTPDKAVEDVLKKVFE 329
SGAS P+ V VL+++ E
Sbjct: 288 SGASVPEVLVRGVLERLAE 306
>gi|78060959|ref|YP_370867.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
sp. 383]
gi|77968844|gb|ABB10223.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
sp. 383]
Length = 313
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 133/309 (43%), Gaps = 66/309 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V + L + + ++ D V G V + A G A
Sbjct: 33 VYVRHEIVHNRHVVENLRNKGARFV------EELDEVPHGAVAIFSAHGVAQTVERDAET 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKE 135
+ + ++D TCP V+KV ++ I+ G H E T + I+V++ E
Sbjct: 87 RGLDVLDATCPLVTKVHVQGRQYVAAGRRLILIGHAGHPEVEGTIGQIPAEVILVQSEAE 146
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
+ L T A++ QTT+ +T I
Sbjct: 147 VDT---------LTVPVDTPVAYI-----------------------TQTTLSVDDTRGI 174
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
+ +++ G + + IC ATQ RQ A+ ++ E+VD++LVVG NSSN+
Sbjct: 175 IEALQRRFTDLVGPDTRD--------ICYATQNRQAAVREL-SEQVDVLLVVGATNSSNS 225
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L+EI + G+PSY + G+++ K W + T+G+T+GAS
Sbjct: 226 NRLREIGTESGVPSYLVAD------GSEV-----------KAEWFANAK-TVGLTAGASA 267
Query: 316 PDKAVEDVL 324
P++ VEDV+
Sbjct: 268 PEEMVEDVI 276
>gi|357417832|ref|YP_004930852.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Pseudoxanthomonas spadix BD-a59]
gi|355335410|gb|AER56811.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Pseudoxanthomonas spadix BD-a59]
Length = 316
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 133/316 (42%), Gaps = 63/316 (19%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L+ A + VEE D V V+ A G +
Sbjct: 33 IYVRHEVVHNRFVVDDLK--ARGAVFVEE----LDEVPDNSTVIFSAHGVSQAVRQEAER 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V +H + ++ G H E T
Sbjct: 87 RGLKVFDATCPLVTKVHLEVARHCRAGRDVVLIGHAGHPEVEGTM--------------- 131
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVS--KGFDPDVDLVKVGIANQTTMLKGETEE 194
G+ + T +L + V+ + PD QTT+ +T
Sbjct: 132 ---------GQWDRECGTGRIYLVEDIAGVATLQIEQPD----NFAYTTQTTLSVDDTVG 178
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
I + G +N + IC ATQ RQDA+ + + DL+LVVG NSSN
Sbjct: 179 IIAALRARFPAMQGPKN--------DDICYATQNRQDAVRDLARQ-CDLVLVVGSPNSSN 229
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
++ L+E+AE G+ +Y ID + I P W+ G+ +G+T+GAS
Sbjct: 230 SNRLRELAERDGVEAYLIDGAQEIDPA-----------------WI-DGKRKVGVTAGAS 271
Query: 315 TPDKAVEDVLKKVFEI 330
PD ++ V++++ E+
Sbjct: 272 APDVLIDGVIQRLREL 287
>gi|260654145|ref|ZP_05859635.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Jonquetella
anthropi E3_33 E1]
gi|424845506|ref|ZP_18270117.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Jonquetella anthropi DSM 22815]
gi|260631130|gb|EEX49324.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Jonquetella
anthropi E3_33 E1]
gi|363986944|gb|EHM13774.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Jonquetella anthropi DSM 22815]
Length = 289
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 136/313 (43%), Gaps = 74/313 (23%)
Query: 16 KIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLN 75
+++ IHNP RL + ++ + + V G V + A G A + L
Sbjct: 33 ELYCVGSPIHNPQEIARLAQKGLRVVASPQD------VPSGSTVFIRAHGIAPDLRNALK 86
Query: 76 NKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKE 135
+NV+I+D TCP+V + + Y+ ++ G SH E ++
Sbjct: 87 QRNVRIIDGTCPFVRVAQARAKALEDEGYSVVVAGDASHPEVIS---------------- 130
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVK---VGIANQTTMLKGET 192
I+GG NG+ K VS D DL K +G +QTT+
Sbjct: 131 -------IVGGLQNGA------------KVVSNSTDLQ-DLAKIERIGFVSQTTL----P 166
Query: 193 EEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNS 252
E++ + +R ++ + NTIC AT ERQ A+ ++V ++ D I+V+GG +S
Sbjct: 167 EDLFASIVSAAVR------ISPDVKAHNTICRATFERQRAVAELV-KRTDGIVVIGGRDS 219
Query: 253 SNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSG 312
+NT+ L IA+ G WI+ GEL K W G+ +GI +G
Sbjct: 220 ANTAKLFHIAKSCGADVLWIEEA---------------GELDGK--WF-TGKTHVGIAAG 261
Query: 313 ASTPDKAVEDVLK 325
ASTPD +E+ ++
Sbjct: 262 ASTPDWLIEEFIQ 274
>gi|294781761|ref|ZP_06747094.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Fusobacterium
sp. 1_1_41FAA]
gi|294481871|gb|EFG29639.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Fusobacterium
sp. 1_1_41FAA]
Length = 827
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 142/310 (45%), Gaps = 61/310 (19%)
Query: 18 WITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNK 77
+I ++HN V + +E+ + + EE + D + + D+VV+ A G + + L +
Sbjct: 33 YILGMLVHNKQVVEDMEKKGFKLVKEEELLEDIDDLKENDIVVVRAHGTSKKVHEKLKER 92
Query: 78 NVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAE 137
V++ D TC +V+K+ +E + Y + G +H E SFA I ++++EA
Sbjct: 93 KVKVYDATCIFVNKIRQEIEIANEKGYNILFMGDKNHPEVKGVISFADNIQIFESLEEAM 152
Query: 138 YVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGK 197
V S+K L + QTT+ K + EE+
Sbjct: 153 KV----------KIDSSKTYLL----------------------STQTTLNKKKFEEV-- 178
Query: 198 LVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSH 257
+K+ EN ++ I F+ IC AT RQ A+ ++ K D++++VG SSNT
Sbjct: 179 -------KKYFKENY-QNVIIFDKICGATAVRQKAVEELAI-KADIVIIVGDTKSSNTKK 229
Query: 258 LQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPD 317
L EI++ SY +++E+++ + G+ +GIT+GASTP+
Sbjct: 230 LYEISKKLNSESYLVENEEQLNLS------------------IFSGKKVVGITAGASTPE 271
Query: 318 KAVEDVLKKV 327
+ + ++ KK+
Sbjct: 272 ETIMNIEKKI 281
>gi|414582523|ref|ZP_11439663.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 5S-1215]
gi|420876404|ref|ZP_15339777.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 5S-0304]
gi|420882393|ref|ZP_15345757.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 5S-0421]
gi|420888024|ref|ZP_15351378.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 5S-0422]
gi|420897649|ref|ZP_15360988.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 5S-0708]
gi|420898048|ref|ZP_15361385.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 5S-0817]
gi|420903766|ref|ZP_15367088.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 5S-1212]
gi|420970592|ref|ZP_15433791.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 5S-0921]
gi|392091448|gb|EIU17259.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 5S-0421]
gi|392091983|gb|EIU17793.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 5S-0304]
gi|392092584|gb|EIU18389.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 5S-0422]
gi|392096961|gb|EIU22756.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 5S-0708]
gi|392109071|gb|EIU34850.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 5S-0817]
gi|392109606|gb|EIU35381.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 5S-1212]
gi|392117675|gb|EIU43443.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 5S-1215]
gi|392173354|gb|EIU99022.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
abscessus 5S-0921]
Length = 322
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 142/318 (44%), Gaps = 73/318 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V L + I V+E D V +G +VV A G A
Sbjct: 42 VYVRHEIVHNRYVVDTLAKAGA--IFVDE----TDEVPEGAIVVFSAHGVAPTVHEKAAE 95
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+N++ +D TCP V+KV ++ + D+ ++ G HEE + TA A ++ +
Sbjct: 96 RNLKTIDATCPLVTKVHQEAKRFARDDFDILLIGHEGHEEVIGTAGEAPDHVQL------ 149
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
++G ++ + D KV +QTT+ ET E
Sbjct: 150 -----------VDGPNAVDNVTVR--------------DENKVIWLSQTTLSVDETMET- 183
Query: 197 KLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGGWN 251
V+ + E F + + IC ATQ RQ A+ M E +L++VVG N
Sbjct: 184 ------------VQRLRERFPTLQDPPSDDICYATQNRQVAVKAMAPE-CELVIVVGSRN 230
Query: 252 SSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITS 311
SSN+ L E+A + G++ +Y + + E ++ E WL +G T+G+TS
Sbjct: 231 SSNSVRLVEVA---------------LNAGSRASYLVDYAEDIDPE-WL-EGVTTVGVTS 273
Query: 312 GASTPDKAVEDVLKKVFE 329
GAS P+ V VL+++ E
Sbjct: 274 GASVPEVLVRGVLERLAE 291
>gi|365968947|ref|YP_004950508.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Enterobacter
cloacae EcWSU1]
gi|365747860|gb|AEW72087.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Enterobacter
cloacae EcWSU1]
Length = 331
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 138/322 (42%), Gaps = 61/322 (18%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L E I +Q V G +++ A G + +
Sbjct: 48 IYVRHEVVHNRYVVDSLRERGAIFI------EQISEVPDGAILIFSAHGVSQAVRNEAKS 101
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++ + D TCP V+KV V + + SI+ G H E T G+Y N +
Sbjct: 102 RDLTVFDATCPLVTKVHMEVARASRRGEESILIGHAGHPEVEGTM---GQY---SNPEGG 155
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
Y+ + S ++ F K F QTT+ +T ++
Sbjct: 156 MYLVE-----------SPEDVFTLNVKNETRLSF-----------MTQTTLSVDDTSDVI 193
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+ + + G + IC AT RQ+A+ + + E+ D++LVVG NSSN++
Sbjct: 194 DALRQRFPKIVGPRK--------DDICYATTNRQEAV-RALAEQADVVLVVGSKNSSNSN 244
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L E+A+ G +Y ID I +E W+ K +G+T+GAS P
Sbjct: 245 RLAELAQRMGKAAYLIDDSSDI-----------------QEAWV-KNVACVGVTAGASAP 286
Query: 317 DKAVEDVLKKVFEIKREEALQL 338
D V++V+ ++ E+ EA+ L
Sbjct: 287 DILVQNVISRLQELGGGEAVPL 308
>gi|402698414|ref|ZP_10846393.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
fragi A22]
Length = 315
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 142/313 (45%), Gaps = 64/313 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L I VEE D V +++ A G +
Sbjct: 33 IYVRHEVVHNKFVVEDLRSRGA--IFVEE----LDQVPDDVILIFSAHGVSQAVRTEAAG 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V ++ + I+ G H E T G+Y
Sbjct: 87 RGLKVFDATCPLVTKVHIEVARYSRDGRECILIGHAGHPEVEGT---MGQY--------- 134
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVS--KGFDPDVDLVKVGIANQTTMLKGETEE 194
D GG + +L + +K V+ +P+ K+ QTT+ +T
Sbjct: 135 ----DARNGGAI---------YLVEDEKDVANLNVINPE----KLAFVTQTTLSMDDTS- 176
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
++++ R + + N IC ATQ RQDA+ ++ +E D++LVVG NSSN
Sbjct: 177 --RVIDALRARFPAIGGPRK-----NDICYATQNRQDAVKQLADE-CDVVLVVGSPNSSN 228
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
++ L+E+AE P+Y ID + + +++W +G +IGIT+GAS
Sbjct: 229 SNRLRELAERMATPAYLIDGAEDL-----------------QQSWF-EGVESIGITAGAS 270
Query: 315 TPDKAVEDVLKKV 327
P+ V V++++
Sbjct: 271 APEVLVRGVIRQL 283
>gi|455643623|gb|EMF22747.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Citrobacter
freundii GTC 09479]
Length = 316
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 142/325 (43%), Gaps = 67/325 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L E I +Q V G +++ A G +
Sbjct: 33 IYVRHEVVHNRYVVDSLRERGAIFI------EQISEVPDGAILIFSAHGVSQAVRNEAKG 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++ + D TCP V+KV V + + SI+ G H E T G+Y N +
Sbjct: 87 RDLTVFDATCPLVTKVHMEVARASRRGEESILIGHAGHPEVEGTM---GQY---SNPQGG 140
Query: 137 EYVC---DYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETE 193
Y+ D +L +LN + K +F+ QTT+ +T
Sbjct: 141 MYLVESPDDVL--KLNVKNEGKLSFM-----------------------TQTTLSVDDTS 175
Query: 194 EIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSS 253
++ + + + G + IC AT RQ+A+ + + E+ D++LVVG NSS
Sbjct: 176 DVIDALRQRFPKIIGPRK--------DDICYATTNRQEAV-RALAEQADVVLVVGSKNSS 226
Query: 254 NTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGA 313
N++ L E+A+ G +Y ID I +E W+ + + +G+T+GA
Sbjct: 227 NSNRLAELAQRMGKAAYLIDDATDI-----------------QEAWVKEAK-CVGVTAGA 268
Query: 314 STPDKAVEDVLKKVFEIKREEALQL 338
S PD V++V+ ++ E+ EA+ L
Sbjct: 269 SAPDILVQNVIARLQELGGGEAIPL 293
>gi|345297815|ref|YP_004827173.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Enterobacter
asburiae LF7a]
gi|345091752|gb|AEN63388.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Enterobacter
asburiae LF7a]
Length = 316
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 138/322 (42%), Gaps = 61/322 (18%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L E I +Q V G +++ A G + +
Sbjct: 33 IYVRHEVVHNRYVVDSLRERGAIFI------EQISEVPDGAILIFSAHGVSQAVRNEAKS 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++ + D TCP V+KV V + + SI+ G H E T G+Y N +
Sbjct: 87 RDLSVFDATCPLVTKVHMEVARASRRGEESILIGHAGHPEVEGTM---GQY---SNPEGG 140
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
Y+ + S ++ F K F QTT+ +T ++
Sbjct: 141 MYLVE-----------SPEDVFTLDVKNEARLSF-----------MTQTTLSVDDTSDVI 178
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+ + + G + IC AT RQ+A+ + + E+ D++LVVG NSSN++
Sbjct: 179 DALRQRFPKIVGPRK--------DDICYATTNRQEAV-RALAEQADVVLVVGSKNSSNSN 229
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L E+A+ G ++ ID I +E W+ K +G+T+GAS P
Sbjct: 230 RLAELAQRMGKAAFLIDDATDI-----------------QEAWV-KNATCVGVTAGASAP 271
Query: 317 DKAVEDVLKKVFEIKREEALQL 338
D V++V+ ++ E+ EA+ L
Sbjct: 272 DILVQNVIARLQELGGGEAIPL 293
>gi|262172238|ref|ZP_06039916.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio mimicus
MB-451]
gi|261893314|gb|EEY39300.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio mimicus
MB-451]
Length = 316
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 141/318 (44%), Gaps = 67/318 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L++ + + ++ V ++V+ A G +
Sbjct: 33 IYVRHEVVHNRFVVEGLKQRGARFV------EELSEVPNDNIVIFSAHGVSQAVRQEAKE 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++ + D TCP V+KV V + + + ++ G H E T G+Y
Sbjct: 87 RSLTVFDATCPLVTKVHMEVARASRKNMEVVLIGHAGHPEVEGTM---GQY--------- 134
Query: 137 EYVCDYILGGELNGSSSTKEAFL-EKFKKAVS---KGFDPDVDLVKVGIANQTTMLKGET 192
+S T +L EK + VS K DP + +QTT+ ET
Sbjct: 135 --------------ASDTGGMYLVEKPEDVVSLQAKVKDPS----HLHYVSQTTLSVDET 176
Query: 193 EEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNS 252
++ + + + G + IC ATQ RQDA+ +++ ++VD+++VVG NS
Sbjct: 177 ADVIDELRRVFPKIQGPRK--------DDICYATQNRQDAV-RILAQQVDVMVVVGSKNS 227
Query: 253 SNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSG 312
SN++ L+E+AE G P Y D + I P W + +G+T+G
Sbjct: 228 SNSTRLKELAEKLGTPGYLTDCPQDIYP-----------------EWFENASL-VGVTAG 269
Query: 313 ASTPDKAVEDVLKKVFEI 330
AS P++ V +L ++ E+
Sbjct: 270 ASAPEELVNQILDRIKEL 287
>gi|429729423|ref|ZP_19264082.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Corynebacterium
durum F0235]
gi|429149447|gb|EKX92425.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Corynebacterium
durum F0235]
Length = 324
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 139/312 (44%), Gaps = 69/312 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ EI+HN V L E I V+E + V +G +V A G +
Sbjct: 42 VYVRKEIVHNRYVVDTLAERGA--IFVDETTE----VPEGSHLVFSAHGVSPAVHAEAKA 95
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++ +D TCP V+KV V++ + Y ++ G HEE TA A + +
Sbjct: 96 LSLETLDATCPLVTKVHNEVKRFARDGYQILLIGHEGHEEVEGTAGEAPDVVHL------ 149
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
++G++S S F P+ LV + +QTT+ ET EI
Sbjct: 150 -----------VDGAASVD-----------SLDFGPEDKLVWL---SQTTLSVDETMEIV 184
Query: 197 KLVEKTMMRKFGVENVNEHFIS--FNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
+L++ KF H + IC ATQ RQ A+ K + E+ DL++VVG NSSN
Sbjct: 185 QLLKA----KF------PHITDPPSDDICYATQNRQVAV-KAIAERSDLVIVVGSQNSSN 233
Query: 255 TSHLQEIAEDRGI-PSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGA 313
+ L E+A G SY +D ++ P WL G T+G+TSGA
Sbjct: 234 SKRLVEVALQGGADASYLVDYAHQVKP-----------------EWL-DGVTTVGVTSGA 275
Query: 314 STPDKAVEDVLK 325
S P+ V+DV+K
Sbjct: 276 SVPEILVQDVIK 287
>gi|421863856|ref|ZP_16295549.1| putative, Molybdenum cofactor biosynthesis protein A [Burkholderia
cenocepacia H111]
gi|358076182|emb|CCE46427.1| putative, Molybdenum cofactor biosynthesis protein A [Burkholderia
cenocepacia H111]
Length = 704
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 131/312 (41%), Gaps = 66/312 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V + L + + ++ D V G V + A G A
Sbjct: 33 VYVRHEIVHNRHVVENLRNKGARFV------EELDEVPHGAVAIFSAHGVAQTVERDAQT 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKE 135
+ + ++D TCP V+KV ++ I+ G H E T + I+V++ E
Sbjct: 87 RGLDVLDATCPLVTKVHVQGRQYVAAGRRLILIGHAGHPEVEGTIGQIPAEVILVQSEAE 146
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
+ L T A++ QTT+ +T I
Sbjct: 147 VD---------TLTLPVDTPVAYI-----------------------TQTTLSVDDTRGI 174
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
+ +++ G + + IC ATQ RQ A+ ++ E+VD++LVVG NSSN+
Sbjct: 175 IEALQRRFTDLVGPDTRD--------ICYATQNRQAAVREL-SEQVDVLLVVGATNSSNS 225
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L+EI + G+PSY + + K W G T+G+T+GAS
Sbjct: 226 NRLREIGTESGVPSYLVADGSEV-----------------KAEWF-AGVQTVGLTAGASA 267
Query: 316 PDKAVEDVLKKV 327
P++ VEDV+ +
Sbjct: 268 PEEMVEDVISAL 279
>gi|453049162|gb|EME96780.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Streptomyces
mobaraensis NBRC 13819 = DSM 40847]
Length = 444
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 100/326 (30%), Positives = 150/326 (46%), Gaps = 67/326 (20%)
Query: 2 AFIAYE-ARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVV 60
A IA E A +Q+ +++ +EI+HN V K LE+ I V+E F+V +G++V+
Sbjct: 138 AVIAVEKALEQY-GAPVYVRHEIVHNKYVVKTLEKKGA--IFVDE---TFEV-PEGNIVI 190
Query: 61 LPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT 120
A G A + +D TCP V+KV ++ + DY ++ G HEE + T
Sbjct: 191 FSAHGVAPVVHEEAARGKLATIDATCPLVTKVHKEAVRYAREDYDILLIGHEGHEEVIGT 250
Query: 121 ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVG 180
+ A +I + ++G + DPD KV
Sbjct: 251 SGEAPDHIQL-----------------VDGPQDVANVEVR----------DPD----KVV 279
Query: 181 IANQTTMLKGET-EEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEE 239
+QTT+ ET E +G L KF N + IC ATQ RQ A+ KM E
Sbjct: 280 WLSQTTLSVDETMETVGAL-----KNKFP----NLLSPPSDDICYATQNRQTAVKKMGAE 330
Query: 240 KVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENW 299
DL++VVG NSSN+ L E+A +G G + A+ + + E ++ E W
Sbjct: 331 -ADLVIVVGSKNSSNSVRLVEVA---------------LGAGARAAHLVDYAEEID-EAW 373
Query: 300 LPKGQITIGITSGASTPDKAVEDVLK 325
L +G T+G+TSGAS P+ VE VL+
Sbjct: 374 L-EGVSTVGVTSGASVPEILVEGVLE 398
>gi|421048099|ref|ZP_15511095.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
massiliense CCUG 48898 = JCM 15300]
gi|392242264|gb|EIV67751.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
massiliense CCUG 48898]
Length = 322
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 142/318 (44%), Gaps = 73/318 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V L + I V+E D V +G +VV A G A
Sbjct: 42 VYVRHEIVHNRYVVDTLAKAGA--IFVDE----TDEVPEGAIVVFSAHGVAPTVHDKAAE 95
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+N++ +D TCP V+KV ++ + D+ ++ G HEE + TA A ++ +
Sbjct: 96 RNLKTIDATCPLVTKVHQEAKRFARDDFDILLIGHEGHEEVIGTAGEAPDHVQL------ 149
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
++G ++ + D KV +QTT+ ET E
Sbjct: 150 -----------VDGPNAVDNVTVR--------------DENKVIWLSQTTLSVDETMET- 183
Query: 197 KLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGGWN 251
V+ + E F + + IC ATQ RQ A+ M E +L++VVG N
Sbjct: 184 ------------VQRLRERFPTLQDPPSDDICYATQNRQVAVKAMAPE-CELVIVVGSRN 230
Query: 252 SSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITS 311
SSN+ L E+A + G++ +Y + + E ++ E WL +G T+G+TS
Sbjct: 231 SSNSVRLVEVA---------------LNAGSRASYLVDYAEDIDPE-WL-EGVTTVGVTS 273
Query: 312 GASTPDKAVEDVLKKVFE 329
GAS P+ V VL+++ E
Sbjct: 274 GASVPEVLVRGVLERLAE 291
>gi|302335701|ref|YP_003800908.1| hydroxymethylbutenyl pyrophosphate reductase [Olsenella uli DSM
7084]
gi|301319541|gb|ADK68028.1| hydroxymethylbutenyl pyrophosphate reductase [Olsenella uli DSM
7084]
Length = 278
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 128/315 (40%), Gaps = 72/315 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I +IHNPTV LE V VEE + G ++L G +E
Sbjct: 33 IHTLGPLIHNPTVVAELEREGVGV--VEEADDE-----PGGTLLLRTHGVTPDEEAAARR 85
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ ++D TCP+V + + E+ Y I+ G+ H E T A + V++ +
Sbjct: 86 SHDSVLDATCPFVVRAHNAAERLVAEGYQVIVFGEAGHPEVEGTLGHAPGAVTVESAADV 145
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI- 195
E G LN KVG+ QTT + + E+
Sbjct: 146 E-------GLALN---------------------------RKVGVVVQTTQSRAQLREVV 171
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
LV +T E F+TIC+AT RQ A ++ VD+++V+GG S+NT
Sbjct: 172 AALVGRT-----------EELRVFDTICEATSSRQAAAARLAS-SVDVMIVIGGRISANT 219
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L EI R ++ I+ + + +W KG T G+T+GAST
Sbjct: 220 TRLAEICATRCKGTHHIEGADEL-----------------EASWF-KGAKTCGVTAGAST 261
Query: 316 PDKAVEDVLKKVFEI 330
P +++V+ + ++
Sbjct: 262 PQTQIDEVVSAIGKV 276
>gi|168186332|ref|ZP_02620967.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
botulinum C str. Eklund]
gi|169295859|gb|EDS77992.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
botulinum C str. Eklund]
Length = 634
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 144/313 (46%), Gaps = 68/313 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I+ +IHN V + L+ + +I ++E + + +GDVV++ + G + L +
Sbjct: 34 IYTLGPLIHNNDVVEFLKSKNITSIELDE----INSLKEGDVVIIRSHGITPSVIKLLKD 89
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
KN+ I D TCP+V+ + +V+K+ + Y II G +H E V + I+
Sbjct: 90 KNLIIADATCPYVAHIHETVKKYYQLGYQIIIVGDKNHPEVVGINGYCNNTAIISK---- 145
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
LN S + KV I +QTT + E
Sbjct: 146 ---------DGLNIKSLSD----------------------KVCIVSQTT---EKQENFN 171
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
K+++K + + + +FNTIC+AT+ RQ++ K + +KVD ++V+GG++SSNT+
Sbjct: 172 KVIDKIIP-------LCKSLANFNTICNATKTRQESA-KELSQKVDSMVVIGGYHSSNTT 223
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L EI + + +++ I +L+E N IG+T+GASTP
Sbjct: 224 KLYEICKKNCNNTIHVENASEIPQ-----------DLIENSN-------NIGVTAGASTP 265
Query: 317 DKAVEDVLKKVFE 329
+++ + K+ E
Sbjct: 266 AWIIKEAILKMSE 278
>gi|148260826|ref|YP_001234953.1| hydroxymethylbutenyl pyrophosphate reductase [Acidiphilium cryptum
JF-5]
gi|338979875|ref|ZP_08631213.1| Hydroxymethylbutenyl pyrophosphate reductase [Acidiphilium sp. PM]
gi|146402507|gb|ABQ31034.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Acidiphilium
cryptum JF-5]
gi|338209212|gb|EGO96993.1| Hydroxymethylbutenyl pyrophosphate reductase [Acidiphilium sp. PM]
Length = 327
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 133/314 (42%), Gaps = 69/314 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V + L + + V G + V A G A + + N
Sbjct: 52 IYVRHEIVHNRHVVEDLRSRGAVFV------DEISEVPDGAITVFSAHGVARKVQQSAAN 105
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ + ++D TCP V+KV + ++ ++ G H E T
Sbjct: 106 RALPVIDATCPLVAKVHSEGRRYAGQGREIVLIGHAGHAEVEGTI--------------- 150
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI- 195
G+++G + + VS DPD K+ QTT+ +T I
Sbjct: 151 ---------GQIDGRVYLVQTVEDVASLQVS---DPD----KLAYITQTTLSVDDTRGII 194
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
LVE R G+ + IC ATQ RQ+A+ + + E+VD+ILVVG NSSN+
Sbjct: 195 AALVE----RFPGIVGPD-----VRDICYATQNRQEAV-RHLAEQVDVILVVGSRNSSNS 244
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L EI + G PSY ID + P +W KG +G+T+GAS
Sbjct: 245 NRLCEIGAELGRPSYLIDDASHLDP-----------------SWF-KGIRAVGVTAGASA 286
Query: 316 PD---KAVEDVLKK 326
P+ K V D L+K
Sbjct: 287 PEVLVKGVIDGLRK 300
>gi|345001825|ref|YP_004804679.1| hydroxymethylbutenyl pyrophosphate reductase [Streptomyces sp.
SirexAA-E]
gi|344317451|gb|AEN12139.1| hydroxymethylbutenyl pyrophosphate reductase [Streptomyces sp.
SirexAA-E]
Length = 329
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 144/326 (44%), Gaps = 67/326 (20%)
Query: 2 AFIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVL 61
A IA E + I++ +EI+HN V + LE+ I VE+ + V +G +V+
Sbjct: 27 AVIAVEKALEQYGAPIYVRHEIVHNKYVVQTLEKKGA--IFVEQTAE----VPEGSIVMF 80
Query: 62 PAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATA 121
A G A + + +D TCP V+KV ++ K DY ++ G HEE + T+
Sbjct: 81 SAHGVAPTVHAEAAERKLATIDATCPLVTKVHKEAVRYAKEDYDILLIGHDGHEEVIGTS 140
Query: 122 SFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGI 181
A +I + + E + E+ S KV
Sbjct: 141 GEAPDHITLVDGPED------VANVEVRDES-------------------------KVVW 169
Query: 182 ANQTTMLKGET-EEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEK 240
+QTT+ ET E +G L +KF N + IC ATQ RQ A+ K+ EE
Sbjct: 170 LSQTTLSVDETMETVGAL-----KQKFP----NLLSPPSDDICYATQNRQIAVKKLSEE- 219
Query: 241 VDLILVVGGWNSSNTSHLQEIAEDRGIP-SYWIDSEKRIGPGNKIAYKLMHGELVEKENW 299
+L++VVG NSSN+ + E+A D G P ++ +D I E W
Sbjct: 220 AELVIVVGSKNSSNSIRMVEVALDAGAPAAHLVDFADEI-----------------DEAW 262
Query: 300 LPKGQITIGITSGASTPDKAVEDVLK 325
L +G T+G+TSGAS PD V+ V++
Sbjct: 263 L-EGVTTVGLTSGASVPDVLVDGVIE 287
>gi|399001536|ref|ZP_10704249.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pseudomonas sp. GM18]
gi|398127426|gb|EJM16836.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pseudomonas sp. GM18]
Length = 315
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 135/312 (43%), Gaps = 62/312 (19%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L A I VEE D V +V+ A G +
Sbjct: 33 IYVRHEVVHNKFVVEDLR--ARGAIFVEE----LDQVPDDVIVIFSAHGVSQAVRTEATG 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V ++ + I+ G H E T
Sbjct: 87 RGLKVFDATCPLVTKVHIEVARYSRDGRECILIGHAGHPEVEGTM--------------- 131
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKK-AVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
G+ +GS+ +E K A + +P+ ++ QTT+ +T +
Sbjct: 132 ---------GQYDGSNGGAIYLVEDEKDVAALQVNNPE----RLAFVTQTTLSMDDTSRV 178
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
+ K G + IC ATQ RQDA+ ++ +E D++LVVG NSSN+
Sbjct: 179 IDALRKRFPAIGGPRK--------DDICYATQNRQDAVKQLADE-CDVVLVVGSPNSSNS 229
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L+E+AE P+Y ID + + +++W G IGIT+GAS
Sbjct: 230 NRLRELAERMATPAYLIDGAEDL-----------------QKSWF-DGVERIGITAGASA 271
Query: 316 PDKAVEDVLKKV 327
P+ V V++++
Sbjct: 272 PEVLVRGVIQQL 283
>gi|284032148|ref|YP_003382079.1| hydroxymethylbutenyl pyrophosphate reductase [Kribbella flavida DSM
17836]
gi|283811441|gb|ADB33280.1| hydroxymethylbutenyl pyrophosphate reductase [Kribbella flavida DSM
17836]
Length = 334
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 124/320 (38%), Gaps = 67/320 (20%)
Query: 8 ARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAA 67
AR++ P +++ +I+HN V LE + + D V VV A G A
Sbjct: 30 ARRRSP---VYVRKQIVHNTHVVADLESRGAVFV------DELDEVPADATVVFSAHGVA 80
Query: 68 VEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKY 127
+ + +VD TCP V+KV ++ T ++ G HEE T
Sbjct: 81 PAVRAEAERRGLDVVDATCPLVTKVHAEARRYAGRGDTVVLIGHAGHEEVEGTM------ 134
Query: 128 IIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTM 187
G + + +E + + D +V QTT+
Sbjct: 135 ----------------------GEAPDRTVLVETVDDVAALEVE---DAGRVSYLTQTTL 169
Query: 188 LKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVV 247
ET V + KFG + IC AT RQ+A+ + ++ DL+LVV
Sbjct: 170 AVDET----AAVLDALRAKFGALRGPDS----ADICYATTNRQEALGALSDDA-DLVLVV 220
Query: 248 GGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITI 307
G NSSN+ L E+A RG P+Y ID + P WL G I
Sbjct: 221 GSDNSSNSRRLVELARRRGTPAYLIDDGSGLRP-----------------EWL-DGVRVI 262
Query: 308 GITSGASTPDKAVEDVLKKV 327
G+T+GAS P + V+ V+ +
Sbjct: 263 GLTAGASAPPRLVDGVVAAL 282
>gi|316932979|ref|YP_004107961.1| hydroxymethylbutenyl pyrophosphate reductase [Rhodopseudomonas
palustris DX-1]
gi|315600693|gb|ADU43228.1| hydroxymethylbutenyl pyrophosphate reductase [Rhodopseudomonas
palustris DX-1]
Length = 314
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 139/317 (43%), Gaps = 70/317 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAA--VEEMVTL 74
+++ +EI+HN V + L+ A I VEE V V V A G A +EE
Sbjct: 39 VYVRHEIVHNKYVVESLK--AKGAIFVEE----LSEVPPKAVTVFSAHGVARSIEEEAA- 91
Query: 75 NNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-ASFAGKYIIVKNM 133
+ + +++ TCP V+KV +++ T I+ G H E T G ++V+N+
Sbjct: 92 -ARGLPVLNATCPLVTKVHNQGKRYTSKGRTLILIGHAGHPEVEGTMGQVPGPVLLVQNL 150
Query: 134 KEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETE 193
++ L T A++ QTT+ +T+
Sbjct: 151 EDV---------AALTLPPETPVAYI-----------------------TQTTLSVDDTK 178
Query: 194 EIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSS 253
+I + + G + + IC ATQ RQ A+ +M + VDLILVVG NSS
Sbjct: 179 DIIAALSEKFQDIQGPDTRD--------ICYATQNRQSAVRQM-SKLVDLILVVGANNSS 229
Query: 254 NTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGA 313
N++ L+EI + G+PSY I + P WL +G+ +GIT+GA
Sbjct: 230 NSNRLREIGTEAGLPSYLIADGSELNP-----------------EWL-EGKRAVGITAGA 271
Query: 314 STPDKAVEDVLKKVFEI 330
S P+ V+DV++ + I
Sbjct: 272 SAPEVLVDDVIEALRRI 288
>gi|438119765|ref|ZP_20871799.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Spiroplasma
melliferum IPMB4A]
gi|434155286|gb|ELL44245.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Spiroplasma
melliferum IPMB4A]
Length = 293
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 135/317 (42%), Gaps = 64/317 (20%)
Query: 5 AYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGK----KQFDVVNKGDVVV 60
A EA ++ +I++ ++HN V + + V IPV + K + + VV+
Sbjct: 22 AKEAAIKYAGRQIYMLGYLVHNKHVIDEIVNLGV--IPVNDFKLNRLELIQTLPDNAVVI 79
Query: 61 LPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKH-KKGDYTSIIHGKYSHEETVA 119
L A G+ KN+ +VDT C WV+ ++++ K DY I GK+ H ET A
Sbjct: 80 LSAHGSDDRIKDVAVQKNITLVDTECEWVTVTKNLIKEYLAKPDYQIIFIGKHFHPETNA 139
Query: 120 TASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKV 179
+ + +V +E ++ DP K+
Sbjct: 140 MLALSPTINLVTTEQEV---------------------------ASILPNLDPTK---KI 169
Query: 180 GIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEE 239
I NQTT+ K + E I VEK K V N I N +C+AT ERQ+A+ +
Sbjct: 170 LITNQTTLSKIDIEAI---VEKL---KTLVPN---EIIFKNDLCNATLERQNAVLSLDPT 220
Query: 240 KVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENW 299
+DL+LVVG SSNT L + E GI SY I+ + I P W
Sbjct: 221 TIDLLLVVGDERSSNTLKLVAMGEQIGIESYRINDKSDIQP-----------------TW 263
Query: 300 LPKGQITIGITSGASTP 316
L + + +T+GASTP
Sbjct: 264 L-ANKTCVAVTAGASTP 279
>gi|295091662|emb|CBK77769.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and
DMAPP forming) [Clostridium cf. saccharolyticum K10]
Length = 351
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 137/307 (44%), Gaps = 64/307 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I+ IIHN V + LEE V+ I + K++ ++KG VV++ + G E L +
Sbjct: 101 IYTYGPIIHNEEVVRDLEEKGVRVI---DTKEELSALSKG-VVIIRSHGVGREIYEILEH 156
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +VD TCP+V K+ V++ + II G SH E + +V +K A
Sbjct: 157 NGITVVDATCPFVKKIHRIVKEQGEEGRRVIIVGDESHPEVQGIKGWGNDDTLV--IKTA 214
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
E LE+ P D ++ + QTT + ++I
Sbjct: 215 EE--------------------LERL---------PLRDGERLCVVAQTTFNYNKFKDI- 244
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
VEK ++ + + NTIC+ATQERQ K + +VD ++V+GG NSSNT
Sbjct: 245 --VEKISKTRYDI-------LVLNTICNATQERQ-VEAKQIASEVDAMIVIGGKNSSNTQ 294
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L EI +Y+I + + P EK + ++GIT+GASTP
Sbjct: 295 KLFEICRRECKNTYYIQTLSDLKP--------------EKAGSVR----SVGITAGASTP 336
Query: 317 DKAVEDV 323
+ +E+V
Sbjct: 337 NNIIEEV 343
>gi|398812861|ref|ZP_10571574.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Variovorax sp. CF313]
gi|398076385|gb|EJL67448.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Variovorax sp. CF313]
Length = 322
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 136/313 (43%), Gaps = 68/313 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGA--AVEEMVTL 74
I++ +EI+HN V L+ A I +EE V G +V A G AVE+
Sbjct: 38 IYVRHEIVHNTYVVNELK--AKGAIFIEE----LSDVPPGATLVFSAHGVSKAVEQ--EA 89
Query: 75 NNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMK 134
++ +I D TCP V+KV V K K + I+ G H E T
Sbjct: 90 RDRGFEIFDATCPLVTKVHVEVAKLAKEGFEFIMIGHKGHPEVEGTM------------- 136
Query: 135 EAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEE 194
G+L+ E + K + S+ K+ + QTT+ + E
Sbjct: 137 -----------GQLSSGIHLVEDVADVAKVSPSQ-------TEKLAVVTQTTLSVDDAAE 178
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
I V R V + IC ATQ RQDA+ K++ +VDL++VVG SSN
Sbjct: 179 IAAAVR---TRFPAVREPKQQ-----DICYATQNRQDAV-KIMSPQVDLVIVVGSPTSSN 229
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
++ L+E+A+ G SY +DS + + P W +G+ IG+T+GAS
Sbjct: 230 SNRLRELAQRLGTESYMVDSAEELKP-----------------EWF-EGKTRIGLTAGAS 271
Query: 315 TPDKAVEDVLKKV 327
P+ V +V+++V
Sbjct: 272 APEVLVREVIERV 284
>gi|383759385|ref|YP_005438370.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Rubrivivax
gelatinosus IL144]
gi|381380054|dbj|BAL96871.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase IspH [Rubrivivax
gelatinosus IL144]
Length = 321
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 138/315 (43%), Gaps = 67/315 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V L A I +EE + V +G +V A G +
Sbjct: 37 IYVRHEIVHNTYVVNDLR--AKGAIFIEELAE----VPRGATLVFSAHGVSQAVREEAER 90
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYI-IVKNMKE 135
+ ++ D TCP V+KV V K + Y I+ G H E T + I +V++ ++
Sbjct: 91 RGFKVFDATCPLVTKVHVEVAKLAREGYEFIMIGHKGHPEVEGTMGQLSEGIYLVEDAED 150
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
++V P D K+ + QTT+ + EI
Sbjct: 151 VQHV-------------------------------QPRGD--KLAVVTQTTLSVDDAAEI 177
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
V++ +V E IC ATQ RQDA+ K++ VD+++VVG SSN+
Sbjct: 178 LAAVKQRF------PHVREP--KKQDICYATQNRQDAV-KVMAPAVDVVIVVGSPTSSNS 228
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L+E+AE G P++ +DS + P W +G+ +G+T+GAS
Sbjct: 229 NRLRELAERLGTPAHMVDSADDLLP-----------------EWF-EGRRRVGLTAGASA 270
Query: 316 PDKAVEDVLKKVFEI 330
PD V+ V+ ++ E+
Sbjct: 271 PDILVQQVIARLREL 285
>gi|407984744|ref|ZP_11165352.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
hassiacum DSM 44199]
gi|407373579|gb|EKF22587.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
hassiacum DSM 44199]
Length = 293
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 135/318 (42%), Gaps = 73/318 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V + L + + + D V +G +VV A G A
Sbjct: 15 VYVRHEIVHNRHVVETLAKRGAVFV------DECDEVPEGAIVVFSAHGVAPSVREAAER 68
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+N++++D TCP V+KV ++ + DY ++ G HEE + TA A ++ + + +A
Sbjct: 69 RNLRVIDATCPLVTKVHNEAKRFARDDYDILLIGHEGHEEVIGTAGEAPDHVQLVDGPDA 128
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
VD V V N+ L T +
Sbjct: 129 -------------------------------------VDKVTVRDENKVIWLSQTTLSVD 151
Query: 197 KLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGGWN 251
+ +E V + E F + IC ATQ RQ A+ M E +L++VVG N
Sbjct: 152 ETMET-------VRRLRERFPKLQDPPSDDICYATQNRQVAVKAMAPE-CELVIVVGSRN 203
Query: 252 SSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITS 311
SSN+ L E+A +G G A+ + + + ++ WL G T+G+TS
Sbjct: 204 SSNSVRLVEVA---------------LGAGADAAHLVDYADDIDPA-WL-DGVTTVGVTS 246
Query: 312 GASTPDKAVEDVLKKVFE 329
GAS P+ V VL+++ +
Sbjct: 247 GASVPEILVRGVLERLAD 264
>gi|383824888|ref|ZP_09980055.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
xenopi RIVM700367]
gi|383336186|gb|EID14591.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
xenopi RIVM700367]
Length = 333
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 140/311 (45%), Gaps = 63/311 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V + L + + + D V +G +VV A G A +
Sbjct: 55 VYVRHEIVHNRHVVETLAKAGAVFV------DETDEVPEGAIVVFSAHGVAPTVHASAAA 108
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+N+Q++D TCP V+KV ++ + DY ++ G HEE + TA A ++ +
Sbjct: 109 RNLQVIDATCPLVTKVHNEAKRFARDDYDILLIGHEGHEEVIGTAGEAPDHVQL------ 162
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
++G ++ + D KV +QTT+ ET +I
Sbjct: 163 -----------VDGPAAVDRVRVR--------------DENKVIWLSQTTLSVDETMDI- 196
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
VE+ R +++ + IC ATQ RQ A+ M + L++VVG NSSN+
Sbjct: 197 --VERLRRRFPKLQDPPS-----DDICYATQNRQVAVKAMAPQ-CQLVIVVGSANSSNSM 248
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L E+A +G G++ A+ + + ++ WL T+G+TSGAS P
Sbjct: 249 RLVEVA---------------LGAGSRAAHLVDCADDIDP-RWL-DDVTTVGVTSGASVP 291
Query: 317 DKAVEDVLKKV 327
+ V VL+++
Sbjct: 292 EVLVRGVLERL 302
>gi|110004385|emb|CAK98723.1| probable 4-hydroxy-3-methylbut-2-enyl diphosphate reductase protein
[Spiroplasma citri]
Length = 293
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 137/317 (43%), Gaps = 64/317 (20%)
Query: 5 AYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGK----KQFDVVNKGDVVV 60
A EA ++ +I++ ++HN V + + V IPV + K + + VV+
Sbjct: 22 AKEAAIKYAGRQIYMLGYLVHNKHVIDEIVNLGV--IPVNDFKLNRLELIQTLPDNAVVI 79
Query: 61 LPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKH-KKGDYTSIIHGKYSHEETVA 119
L A G+ KN+ +VDT C WV+ ++++ K DY I GK+ H ET A
Sbjct: 80 LSAHGSDDRIKDVAVQKNITLVDTECEWVTVTKNLIKEYLAKPDYQIIFIGKHFHPETNA 139
Query: 120 TASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKV 179
+ L +N ++ +E ++ DP K+
Sbjct: 140 MLA---------------------LSPTINLVTTEQEVV------SILPNLDPTK---KI 169
Query: 180 GIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEE 239
I NQTT+ K + E I VEK K V N I N +C+AT ERQ+A+ +
Sbjct: 170 LITNQTTLSKIDIEAI---VEKL---KTLVPN---EIIFKNDLCNATLERQNAVLSLDPT 220
Query: 240 KVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENW 299
+DL+LVVG SSNT L + E GI SY I+ + I P W
Sbjct: 221 TIDLLLVVGDERSSNTLKLVAMGEQIGIESYRINDKSDIQP-----------------TW 263
Query: 300 LPKGQITIGITSGASTP 316
L + + +T+GASTP
Sbjct: 264 L-ANKTCVAVTAGASTP 279
>gi|313893418|ref|ZP_07826990.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Veillonella sp.
oral taxon 158 str. F0412]
gi|313442059|gb|EFR60479.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Veillonella sp.
oral taxon 158 str. F0412]
Length = 632
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 140/312 (44%), Gaps = 73/312 (23%)
Query: 16 KIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLP-AFGAAVEEMVTL 74
K + IIHNP V RLE+ V PV+E + +G +++ G A+ E
Sbjct: 31 KSYTLGPIIHNPQVVGRLEDKGVS--PVQE----VSDIEEGTMIIRSHGVGPAIYE--EA 82
Query: 75 NNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAG-KYIIVKNM 133
K + IVD TCP V K + + T +I G+ +H E + +A + II+++
Sbjct: 83 EQKGLNIVDATCPHVKKAQQDAKSVIEDGMTLVILGEKNHPEVKSINLWANNEGIIIEDE 142
Query: 134 KEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETE 193
+ AE K +EK G+ QTT + +
Sbjct: 143 ESAE-----------------KLQIVEKM-----------------GVVVQTTFSQFKFN 168
Query: 194 EIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSS 253
I ++EK +++ F TIC+ATQERQ++ ++ VDL++VVGG NS
Sbjct: 169 SIIDILEKK----------SKNLKVFKTICNATQERQNSAVELAR-NVDLMIVVGGKNSG 217
Query: 254 NTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGA 313
NT+ L E+ D G +Y I++ + + W + Q T+G+T+GA
Sbjct: 218 NTNRLAEVCRDVGCTTYHIETSTEL-----------------QLEWFNRVQ-TVGVTAGA 259
Query: 314 STPDKAVEDVLK 325
STPD +++V++
Sbjct: 260 STPDWIIKEVIE 271
>gi|170725655|ref|YP_001759681.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Shewanella
woodyi ATCC 51908]
gi|169811002|gb|ACA85586.1| hydroxymethylbutenyl pyrophosphate reductase [Shewanella woodyi
ATCC 51908]
Length = 315
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 141/332 (42%), Gaps = 72/332 (21%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
I A + FP I++ +E++HN V + L++ + VEE D V +V+ A
Sbjct: 27 IVERALELFPA-PIYVRHEVVHNRYVVQNLKDRGA--VFVEE----LDQVPDNSIVIFSA 79
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
G + ++ +++ D TCP V+KV V + + I+ G H E T
Sbjct: 80 HGVSQAVRKEAKHRGLKVFDATCPLVTKVHLQVTRASRKGIECILIGHAGHPEVEGTM-- 137
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
G+Y D GG L S LE DP+ +
Sbjct: 138 -GQY-------------DNPEGGVLLVESPADVESLEVK--------DPN----NLCFVT 171
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVE 238
QTT+ +T ++ +E + F S + IC ATQ RQDA+ + V
Sbjct: 172 QTTLSMDDTADV-------------IEALQSRFPSIQGPRKDDICYATQNRQDAV-RNVA 217
Query: 239 EKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKEN 298
+ VDL +VVG NSSN++ L+E+A+ RG SY +D+ I +
Sbjct: 218 DDVDLFIVVGSKNSSNSNRLRELAQKRGTQSYLVDNSDDI-----------------DSS 260
Query: 299 WLPKGQITIGITSGASTPDKAVEDVLKKVFEI 330
W +G + +T+GAS P+ V+ V+ + ++
Sbjct: 261 WF-EGVTKVAVTAGASAPEVLVQQVIDAIAQL 291
>gi|398964700|ref|ZP_10680477.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pseudomonas sp. GM30]
gi|398148086|gb|EJM36774.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pseudomonas sp. GM30]
Length = 314
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 136/316 (43%), Gaps = 70/316 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L I VEE D V +V+ A G +
Sbjct: 33 IYVRHEVVHNKFVVEDLRSRGA--IFVEE----LDQVPDDVIVIFSAHGVSQAVRSEAAG 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-----ASFAGKYIIVK 131
+ +++ D TCP V+KV V K+ + I+ G H E T AS G +V+
Sbjct: 87 RGLKVFDATCPLVTKVHIEVAKYSRDGRECILIGHAGHPEVEGTMGQYDASNGGAIYLVE 146
Query: 132 NMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGE 191
+ K+ EL + K AF+ QTT+ +
Sbjct: 147 DEKDV---------AELQVRNPEKLAFV-----------------------TQTTLSMDD 174
Query: 192 TEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWN 251
T + + +T G ++ IC ATQ RQDA+ ++ +E D++LVVG N
Sbjct: 175 TSRVIDAL-RTRFPAIGGPRKDD-------ICYATQNRQDAVKQLADE-CDVVLVVGSPN 225
Query: 252 SSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITS 311
SSN++ L+E+AE P+Y ID + + +++W G IGIT+
Sbjct: 226 SSNSNRLRELAERMATPAYLIDGAEDL-----------------QKSWF-DGVERIGITA 267
Query: 312 GASTPDKAVEDVLKKV 327
GAS P+ V V++++
Sbjct: 268 GASAPEVLVRGVIQQL 283
>gi|333979263|ref|YP_004517208.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Desulfotomaculum kuznetsovii DSM 6115]
gi|333822744|gb|AEG15407.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Desulfotomaculum kuznetsovii DSM 6115]
Length = 739
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 134/316 (42%), Gaps = 72/316 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIP-VEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLN 75
++ +IHNP V ++L +Q I VEE + G +++ + G +
Sbjct: 33 VYCLGPLIHNPQVMEKLAAAGIQEIAGVEEARP-------GGKLIIRSHGVGPGILAAAR 85
Query: 76 NKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF-AGKYIIVKNMK 134
+++++VD TCP+V + G ++ G +H E + G+ ++V+ +
Sbjct: 86 ERDLKVVDATCPFVGRAQKLAHSEAAGGTLVVVVGDKNHPEVQGIVDWTGGRAVVVEGPQ 145
Query: 135 EAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEE 194
EA+ + + A L + + ++ F VD+
Sbjct: 146 EAQKL-----------PAVAHMAVLAQTTQPLAN-FQAVVDV------------------ 175
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
+ +K G +NTIC AT RQ A ++ E VD+++VVGG +S+N
Sbjct: 176 --------LQQKAG------QLKVYNTICHATGARQQAALELARE-VDVMVVVGGASSAN 220
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
T L + G+P+Y +++ + + P W +G G+T+GAS
Sbjct: 221 TRKLAALCRQAGVPTYQVETARELDPA-----------------WF-RGVKVAGLTAGAS 262
Query: 315 TPDKAVEDVLKKVFEI 330
TPD +E+V +++ E+
Sbjct: 263 TPDWIIEEVERRMKEL 278
>gi|258620353|ref|ZP_05715391.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio mimicus
VM573]
gi|424809657|ref|ZP_18235034.1| hydroxymethylbutenyl pyrophosphate reductase [Vibrio mimicus SX-4]
gi|258587232|gb|EEW11943.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio mimicus
VM573]
gi|342323145|gb|EGU18931.1| hydroxymethylbutenyl pyrophosphate reductase [Vibrio mimicus SX-4]
Length = 320
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 139/318 (43%), Gaps = 67/318 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L++ + + ++ V ++V+ A G +
Sbjct: 37 IYVRHEVVHNRFVVEGLKQRGARFV------EELSEVPNDNIVIFSAHGVSQAVRQEAKE 90
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++ + D TCP V+KV V + + ++ G H E T G+Y
Sbjct: 91 RSLTVFDATCPLVTKVHMEVARASRKHMEVVLIGHAGHPEVEGTM---GQY--------- 138
Query: 137 EYVCDYILGGELNGSSSTKEAFL----EKFKKAVSKGFDPDVDLVKVGIANQTTMLKGET 192
+S T +L E + S+ DP + +QTT+ ET
Sbjct: 139 --------------ASETGGMYLVEKPEDVESLQSQVKDPS----NLHYVSQTTLSVDET 180
Query: 193 EEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNS 252
++ + + + G + IC ATQ RQDA+ +++ ++VD+++VVG NS
Sbjct: 181 ADVIDELRRVFPKIQGPRK--------DDICYATQNRQDAV-RILAQQVDVMVVVGSKNS 231
Query: 253 SNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSG 312
SN++ L+E+AE G P Y D + I P W ++ +G+T+G
Sbjct: 232 SNSTRLKELAEKLGTPGYLTDCPQDIHP-----------------EWFENARL-VGVTAG 273
Query: 313 ASTPDKAVEDVLKKVFEI 330
AS P++ V +L ++ E+
Sbjct: 274 ASAPEELVNQILDRIKEL 291
>gi|258624725|ref|ZP_05719659.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio mimicus
VM603]
gi|258583012|gb|EEW07827.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio mimicus
VM603]
Length = 320
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 139/318 (43%), Gaps = 67/318 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L++ + + ++ V ++V+ A G +
Sbjct: 37 IYVRHEVVHNRFVVEGLKQRGARFV------EELSEVPNDNIVIFSAHGVSQAVRQEAKE 90
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++ + D TCP V+KV V + + ++ G H E T G+Y
Sbjct: 91 RSLTVFDATCPLVTKVHMEVARASRKHMEVVLIGHAGHPEVEGTM---GQY--------- 138
Query: 137 EYVCDYILGGELNGSSSTKEAFL----EKFKKAVSKGFDPDVDLVKVGIANQTTMLKGET 192
+S T +L E + S+ DP + +QTT+ ET
Sbjct: 139 --------------ASDTGGMYLVEKPEDVESLQSQVKDPS----NLHYVSQTTLSVDET 180
Query: 193 EEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNS 252
++ + + + G + IC ATQ RQDA+ +++ ++VD+++VVG NS
Sbjct: 181 ADVIDELRRVFPKIQGPRK--------DDICYATQNRQDAV-RILAQQVDVMVVVGSKNS 231
Query: 253 SNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSG 312
SN++ L+E+AE G P Y D + I P W ++ +G+T+G
Sbjct: 232 SNSTRLKELAEKLGTPGYLTDCPQDIHP-----------------EWFENARL-VGVTAG 273
Query: 313 ASTPDKAVEDVLKKVFEI 330
AS P++ V +L ++ E+
Sbjct: 274 ASAPEELVNQILDRIKEL 291
>gi|165976949|ref|YP_001652542.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|226741025|sp|B0BRB3.1|ISPH_ACTPJ RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|165877050|gb|ABY70098.1| hydroxymethylbutenyl pyrophosphate reductase [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
Length = 314
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 138/317 (43%), Gaps = 73/317 (23%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L+ A + VEE D V G +V+ A G + E
Sbjct: 33 IYVRHEVVHNRFVVDGLK--AKGAVFVEE----LDEVPDGAIVIFSAHGVSQEVRQEAKR 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++++ D TCP V+KV V + K +I+ G H E + T G+Y N
Sbjct: 87 RDLKVFDATCPLVTKVHMQVARASKKGTKAILIGHEGHPEVIGTM---GQY---DNQDAG 140
Query: 137 EYVCDYILG-GELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
++ + + +L SS F+ QTT+ +T ++
Sbjct: 141 IFLVESVEDIAKLPVSSQDDLTFM-----------------------TQTTLSIDDTSDV 177
Query: 196 GKLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGGW 250
+E + E + + N IC AT RQ A+ ++ ++ L+LVVG
Sbjct: 178 -------------IEALKEKYPAIQGPRKNDICYATTNRQQAVRELAKQS-QLVLVVGSK 223
Query: 251 NSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGIT 310
NSSN++ L E+A G+PS ID + I P +WL G TIGIT
Sbjct: 224 NSSNSNRLAELASRMGVPSKLIDGPQDIDP-----------------SWL-DGVETIGIT 265
Query: 311 SGASTPDKAVEDVLKKV 327
+GAS P+ V+ V++ +
Sbjct: 266 AGASAPEVLVQSVVEHL 282
>gi|451936507|ref|YP_007460361.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Candidatus
Kinetoplastibacterium oncopeltii TCC290E]
gi|451777430|gb|AGF48405.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Candidatus
Kinetoplastibacterium oncopeltii TCC290E]
Length = 316
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 136/314 (43%), Gaps = 68/314 (21%)
Query: 14 EEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVT 73
E I++ +EI+HN V + V + V +G +++ A G + + +
Sbjct: 39 ESIIYVNHEIVHNKHVIDYFKSKGVVFV------NNIIDVPEGSIIIFSAHGVSKDVIAI 92
Query: 74 LNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATA--SFAGKYIIVK 131
K + I+D TCP V+KV V K ++ + II G H E T F+G ++ V+
Sbjct: 93 AKKKKLLIIDATCPLVTKVHLEVLKMRRENREVIIIGHKGHPEIDGTLGQDFSGIHV-VE 151
Query: 132 NMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGE 191
N+++ Y+ D I EL +G QTT+ +
Sbjct: 152 NVRDV-YLLD-INDNEL------------------------------IGYVTQTTLSLDD 179
Query: 192 TEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWN 251
I + ++ + G + + IC ATQ RQ+A+ K + + DLILVVG N
Sbjct: 180 VVCIEEALKNRFPKIVGPKK--------SDICYATQNRQNAL-KYIVKDCDLILVVGSIN 230
Query: 252 SSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITS 311
SSN++ L E+A + SY IDS I P WL + IGITS
Sbjct: 231 SSNSNRLVELARQSSVESYLIDSFDSINPI-----------------WLIDKK-HIGITS 272
Query: 312 GASTPDKAVEDVLK 325
GAS P+ V+ V++
Sbjct: 273 GASAPEVIVDQVVE 286
>gi|352081137|ref|ZP_08952015.1| hydroxymethylbutenyl pyrophosphate reductase [Rhodanobacter sp.
2APBS1]
gi|389797763|ref|ZP_10200803.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Rhodanobacter
sp. 116-2]
gi|351683178|gb|EHA66262.1| hydroxymethylbutenyl pyrophosphate reductase [Rhodanobacter sp.
2APBS1]
gi|388446837|gb|EIM02857.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Rhodanobacter
sp. 116-2]
Length = 320
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 141/317 (44%), Gaps = 72/317 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V +L A + VEE V G V+ A G +
Sbjct: 33 IYVRHEVVHNRYVVDKLR--ADGAVFVEE----LHEVPDGATVIFSAHGVSQAVREEAGQ 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-----ASFAGKYIIVK 131
+++++ D TCP V+KV V + + + ++ G H E T + AG+ +V+
Sbjct: 87 RHLKVFDATCPLVTKVHMEVARLGRIGRSVVLVGHAGHPEVEGTMGQWNPAHAGEIWLVE 146
Query: 132 NMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGE 191
++++ A KF A+S QTT+ +
Sbjct: 147 SVEDV-------------------AALAPKFPHALS-------------YVTQTTLSVDD 174
Query: 192 TEEIGKLVEKTMMRKF-GVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGW 250
T K + + KF +E + + IC ATQ RQDA+ ++ VDL+LVVG
Sbjct: 175 T----KAIIAALRAKFPDIEGPRK-----DDICYATQNRQDAVRRLA-GAVDLMLVVGSV 224
Query: 251 NSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGIT 310
NSSN++ L+E+A +G+ ++ ID + I + +WL G IG+T
Sbjct: 225 NSSNSNRLRELAAKQGVRAFLIDGAEHI-----------------QRDWL-DGVKRIGLT 266
Query: 311 SGASTPDKAVEDVLKKV 327
+GAS P+K V DV+ ++
Sbjct: 267 AGASAPEKLVRDVIARL 283
>gi|336399991|ref|ZP_08580779.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Fusobacterium
sp. 21_1A]
gi|336163188|gb|EGN66120.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Fusobacterium
sp. 21_1A]
Length = 827
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 143/312 (45%), Gaps = 61/312 (19%)
Query: 16 KIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLN 75
K +I ++HN V + ++ + + EE + D + + D+VV+ A G + + L
Sbjct: 31 KKYILGMLVHNKQVVEDMQRKGFKLVTEEELLQDVDSLEENDIVVIRAHGTSKKVHEKLK 90
Query: 76 NKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKE 135
+ V++ D TC +V+K+ +E + Y+ + G +H E SFA I ++ +E
Sbjct: 91 ERKVKVFDATCIFVNKIRQEIEIANEKGYSILFMGDRNHPEVKGVISFADDIQIFESYEE 150
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
A K K + K + ++ QTT+ K + EE+
Sbjct: 151 AT-----------------------KLKIDLDKTY---------LLSTQTTLNKRKFEEV 178
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
+KF EN ++ I F+ IC AT RQ A+ + KV+L++VVG SSNT
Sbjct: 179 ---------KKFFKENY-KNVIIFDKICGATAVRQKAVEDLAV-KVELMIVVGDTKSSNT 227
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
L EI++ +Y I++E+++ + G+ +GIT+GAST
Sbjct: 228 KKLYEISKKLNDNTYLIENEEQLNLD------------------IFSGKKVVGITAGAST 269
Query: 316 PDKAVEDVLKKV 327
P++ + ++ KK+
Sbjct: 270 PEETIMNIEKKI 281
>gi|350569873|ref|ZP_08938266.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Propionibacterium avidum ATCC 25577]
gi|348659797|gb|EGY76522.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Propionibacterium avidum ATCC 25577]
Length = 323
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 136/309 (44%), Gaps = 65/309 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +I+HN V + LEE I V+E D V +VV A G + + N
Sbjct: 42 VYVRKQIVHNRHVVETLEERGA--IFVDE----LDEVPDDALVVFSAHGVSPQVKNEAAN 95
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ ++ +D TCP V+KV ++ D ++ G HEE T A + I + E
Sbjct: 96 RGLRTIDATCPLVTKVHHEAKRFANDDTQILLIGHAGHEEVEGTTGEAPENITLVQTPE- 154
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
+++G DPD V +QTT+ ET E
Sbjct: 155 ----------DVDGLQ-----------------LDPDR---PVAWLSQTTLSVDETVET- 183
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
V++ +R+ + +N + IC ATQ RQ A+ +M K DL++VVG NSSNT
Sbjct: 184 --VDR--IRQLHPQLINP---PSDDICYATQNRQHAVKQMAP-KCDLVIVVGSKNSSNTG 235
Query: 257 HLQEIAEDRGI-PSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
L E+A + G SY +D+ I KE+WL G +IG+TSGAS
Sbjct: 236 RLVEVALESGAKASYRVDNAGEI-----------------KESWL-DGVDSIGVTSGASV 277
Query: 316 PDKAVEDVL 324
P+ V VL
Sbjct: 278 PETLVRGVL 286
>gi|440509701|ref|YP_007347137.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Candidatus
Blochmannia chromaiodes str. 640]
gi|440453914|gb|AGC03406.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Candidatus
Blochmannia chromaiodes str. 640]
Length = 311
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 138/311 (44%), Gaps = 59/311 (18%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V +L + V I ++ + V G V++ A G + +
Sbjct: 33 IYVRHELVHNDYVVTQLSKKGVIFI------ERLNEVPNGSVLIFSAHGVSKKIREQSKI 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
KN+ I+D TCP V+KV V + + D I+ G H E T G+YI V N ++
Sbjct: 87 KNLIIIDATCPLVTKVHKEVSRANRNDMEVILIGHSGHPEVEGTM---GQYISV-NSRQK 142
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
Y+ + S +A+ + F QTT+ +T EI
Sbjct: 143 IYLVE-----------SQADAWSIQVNHPNHLFF-----------VTQTTLSIDDTAEII 180
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
++ K G N IC AT RQ+A+ K + V++I VVG SSN+
Sbjct: 181 AILNKRFPNIMGPRK--------NDICYATFNRQNAL-KNLALMVEMIFVVGSITSSNSV 231
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L E+ +RIG KI Y + H ++K NWL +G IGIT+GAS P
Sbjct: 232 RLMELG-------------RRIG---KITYLISHANDIQK-NWL-RGVNNIGITAGASAP 273
Query: 317 DKAVEDVLKKV 327
D V V++K+
Sbjct: 274 DILVLQVIEKL 284
>gi|350530289|ref|ZP_08909230.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio
rotiferianus DAT722]
Length = 317
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 142/321 (44%), Gaps = 73/321 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L++ I VEE V ++V+ A G + +
Sbjct: 33 IYVRHEVVHNRFVVEGLKQRGA--IFVEE----LHEVPDDNIVIFSAHGVSQAVRQEAKS 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++ + D TCP V+KV V + + + ++ G H E T G+Y
Sbjct: 87 RDLTVFDATCPLVTKVHMEVARASRRNMEVVLIGHAGHPEVEGTM---GQY--------- 134
Query: 137 EYVCDYILGGELNGSSSTKEAFL-------EKFKKAVSKGFDPDVDLVKVGIANQTTMLK 189
SS T +L EK K V DP DL V +QTT+
Sbjct: 135 --------------SSETGGMYLVETPTDVEKLKAIVK---DPS-DLHYV---SQTTLSV 173
Query: 190 GETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGG 249
ET ++ + + + G + IC ATQ RQDA+ ++ + VD+++VVG
Sbjct: 174 DETADVIEELRRVFPEIQGPRK--------DDICYATQNRQDAVRELAND-VDVMVVVGS 224
Query: 250 WNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGI 309
NSSN++ L+E+AE G P Y D + I P W +G+ +G+
Sbjct: 225 KNSSNSTRLKELAEKLGTPGYLTDCPEDIKP-----------------EWF-EGKGKVGV 266
Query: 310 TSGASTPDKAVEDVLKKVFEI 330
T+GAS P++ V +L ++ E+
Sbjct: 267 TAGASAPEELVNQILDRIKEL 287
>gi|295395778|ref|ZP_06805966.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Brevibacterium
mcbrellneri ATCC 49030]
gi|294971313|gb|EFG47200.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Brevibacterium
mcbrellneri ATCC 49030]
Length = 351
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 139/329 (42%), Gaps = 65/329 (19%)
Query: 2 AFIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVL 61
A IA E + +++ EI+HN V + L E I VEE D V G+ VV
Sbjct: 38 AVIAVERALEHYGAPVYVRKEIVHNRHVVETLTERGA--IFVEE----TDQVPHGERVVF 91
Query: 62 PAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATA 121
A G + ++++ +D TCP V+KV + K YT ++ G HEE T
Sbjct: 92 SAHGVSPAVHEEAAERDLKTIDATCPLVTKVHREAVRFAKQGYTILLVGHEGHEEVEGTM 151
Query: 122 SFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGI 181
A + I++ + + +E L +K V
Sbjct: 152 GEAPESIVL-----------------VQDPAEAREVDLGNPEKLV--------------W 180
Query: 182 ANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKV 241
+QTT+ ET E ++ + + + + IC ATQ RQ A+ K + +
Sbjct: 181 ISQTTLSVDETMETVSILRERFPQLIDPPS--------DDICYATQNRQVAV-KKIAPQC 231
Query: 242 DLILVVGGWNSSNTSHLQEIAEDRGI-PSYWIDSEKRIGPGNKIAYKLMHGELVEKENWL 300
DL++VVG NSSNT L E+A D G SY +D + I E+W
Sbjct: 232 DLVIVVGSNNSSNTKRLVEVALDHGAKSSYRVDFAREI-----------------DEDWF 274
Query: 301 PKGQITIGITSGASTPDKAVEDVLKKVFE 329
G T+G+TSGAS PD V+ VL+ + E
Sbjct: 275 -NGVATVGVTSGASVPDLLVKSVLELLAE 302
>gi|359403692|ref|ZP_09196596.1| lytB protein [Spiroplasma melliferum KC3]
gi|358832923|gb|EHK52027.1| lytB protein [Spiroplasma melliferum KC3]
Length = 293
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 135/317 (42%), Gaps = 64/317 (20%)
Query: 5 AYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGK----KQFDVVNKGDVVV 60
A EA ++ +I++ ++HN V + + V IPV + K + + VV+
Sbjct: 22 AKEAAIKYAGRQIYMLGYLVHNKHVIDEIVNLGV--IPVNDFKLNRLELIQTLPDNAVVI 79
Query: 61 LPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKH-KKGDYTSIIHGKYSHEETVA 119
L A G+ KN+ +VDT C WV+ ++++ K DY I GK+ H ET A
Sbjct: 80 LSAHGSDDRIKDVAVQKNITLVDTECEWVTVTKNLIKEYLAKPDYQIIFIGKHFHPETNA 139
Query: 120 TASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKV 179
+ + +V +E ++ DP K+
Sbjct: 140 MLALSPTINLVTTEQEVA---------------------------SILPNLDPTK---KI 169
Query: 180 GIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEE 239
I NQTT+ K + E I VEK K V N I N +C+AT ERQ+A+ +
Sbjct: 170 LITNQTTLSKIDIEAI---VEKL---KTLVPN---EIIFKNDLCNATLERQNAVLSLDPT 220
Query: 240 KVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENW 299
+DL+LVVG SSNT L + E GI SY I+ + I P W
Sbjct: 221 TIDLLLVVGDDRSSNTLKLVAMGEQIGIESYRINDKSDIQP-----------------TW 263
Query: 300 LPKGQITIGITSGASTP 316
L + + +T+GASTP
Sbjct: 264 L-ANKTCVAVTAGASTP 279
>gi|282891601|ref|ZP_06300092.1| hypothetical protein pah_c180o094 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|338174820|ref|YP_004651630.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Parachlamydia
acanthamoebae UV-7]
gi|281498569|gb|EFB40897.1| hypothetical protein pah_c180o094 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|336479178|emb|CCB85776.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Parachlamydia
acanthamoebae UV-7]
Length = 313
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 153/320 (47%), Gaps = 68/320 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V L+ A I +EE + V G ++ A G + +
Sbjct: 33 IYVKHEIVHNRAVVDGLK--AKGAIFIEE----IEEVPIGARLIYSAHGVSPAVREAASR 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ + +D TC V++V ++V+++ Y ++ G +H E + TA G+ V + E+
Sbjct: 87 RQLIEIDATCGLVTRVHSAVKRYAAQGYQVVLIGHRNHVEIIGTA---GEAPDVTTIVES 143
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
A +EK ++ D L + QTT+ + +EI
Sbjct: 144 P-------------------ADVEKLS------YEKDEKLFYI---TQTTLSLDDVKEI- 174
Query: 197 KLVEKTMMRKFGVENVNEHFISF--NTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
+ +++K+ H ++ ++IC AT RQ A+ + + ++ DL+LVVG SSN
Sbjct: 175 ---TEALIQKY------PHIVTLPSSSICYATTNRQLAL-REITDQTDLVLVVGDPTSSN 224
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
++ L+E+A RG+PSY I++E I + W+ G TIG+T+GAS
Sbjct: 225 SNRLREVASKRGLPSYLINNESEI-----------------QLEWM-AGVSTIGLTAGAS 266
Query: 315 TPDKAVEDVLKKVFEIKREE 334
TP+ V++ ++K+ E+ +E
Sbjct: 267 TPEGIVQNCIQKLIELGVKE 286
>gi|237729323|ref|ZP_04559804.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Citrobacter sp.
30_2]
gi|365104006|ref|ZP_09333667.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Citrobacter
freundii 4_7_47CFAA]
gi|395229214|ref|ZP_10407530.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Citrobacter sp.
A1]
gi|424729313|ref|ZP_18157915.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Citrobacter sp.
L17]
gi|226909052|gb|EEH94970.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Citrobacter sp.
30_2]
gi|363644619|gb|EHL83900.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Citrobacter
freundii 4_7_47CFAA]
gi|394717267|gb|EJF22965.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Citrobacter sp.
A1]
gi|422896037|gb|EKU35823.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Citrobacter sp.
L17]
Length = 316
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 142/325 (43%), Gaps = 67/325 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L E I +Q V G +++ A G +
Sbjct: 33 IYVRHEVVHNRYVVDSLRERGAIFI------EQISEVPDGAILIFSAHGVSQAVRNEAKG 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++ + D TCP V+KV V + + SI+ G H E T G+Y N +
Sbjct: 87 RDLTVFDATCPLVTKVHMEVARASRRGEESILIGHAGHPEVEGTM---GQY---SNPQGG 140
Query: 137 EYVC---DYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETE 193
Y+ D +L +LN + K +F+ QTT+ +T
Sbjct: 141 MYLVESPDDVL--KLNVKNEGKLSFM-----------------------TQTTLSVDDTS 175
Query: 194 EIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSS 253
++ + + + G + IC AT RQ+A+ + + E+ D++LVVG NSS
Sbjct: 176 DVIDALRQRFPKIVGPRK--------DDICYATTNRQEAV-RALAEQADVVLVVGSKNSS 226
Query: 254 NTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGA 313
N++ L E+A+ G +Y ID I +E W+ + + +G+T+GA
Sbjct: 227 NSNRLAELAQRMGKAAYLIDDATDI-----------------QEAWVKEAK-CVGVTAGA 268
Query: 314 STPDKAVEDVLKKVFEIKREEALQL 338
S PD V++V+ ++ E+ EA+ L
Sbjct: 269 SAPDILVQNVIARLQELGGGEAIPL 293
>gi|429766811|ref|ZP_19299053.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
celatum DSM 1785]
gi|429182957|gb|EKY24033.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
celatum DSM 1785]
Length = 281
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 146/320 (45%), Gaps = 67/320 (20%)
Query: 5 AYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAF 64
A + ++++ +KI+ +IHN V LE+ + I + + + +N GDV+++ +
Sbjct: 23 AIKTQREY-NKKIYTLGPLIHNNDVVNYLEDNDIYAIDIND----IENLNSGDVILIRSH 77
Query: 65 GAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA 124
G + E L +K + +++ TCP+V+ + V K Y +I G +H E + +
Sbjct: 78 GVSKEVFDLLTDKGLIVINATCPFVTNIQKKVNKFSNEGYKIVILGDKNHPEVIGINGWC 137
Query: 125 GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQ 184
IV K+ + + D P+ KV + +Q
Sbjct: 138 NNEAIV--TKDGKIIEDL-----------------------------PN----KVCVVSQ 162
Query: 185 TTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLI 244
TT E EE + + K FNTIC AT+ERQ ++ ++ + VD +
Sbjct: 163 TT----EKEENWNITINNLNNKVS------ELKQFNTICAATEERQSSVLEL-SKTVDFM 211
Query: 245 LVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQ 304
++VGG NSSNT+ L EIA++ + I++ K + P + I ++
Sbjct: 212 IIVGGKNSSNTTKLYEIAKENCKNTIHIENAKEL-PQSLIDDSSIN-------------- 256
Query: 305 ITIGITSGASTPDKAVEDVL 324
TIG+T+GASTPD +++V+
Sbjct: 257 -TIGVTAGASTPDWIIKEVI 275
>gi|421142076|ref|ZP_15602052.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
fluorescens BBc6R8]
gi|404506470|gb|EKA20464.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
fluorescens BBc6R8]
Length = 315
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 135/317 (42%), Gaps = 72/317 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L I VEE D V +V+ A G +
Sbjct: 33 IYVRHEVVHNKFVVEDLRSRGA--IFVEE----LDQVPDDVIVIFSAHGVSQAVRTEAAG 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V ++ + I+ G H E T
Sbjct: 87 RGLKVFDATCPLVTKVHIEVARYSRDGRECILIGHAGHPEVEGTM--------------- 131
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKK-AVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
G+ +GS+ +E K A + +P+ K+ QTT+ +T +
Sbjct: 132 ---------GQYDGSNGGAIYLVEDEKDVAALQVHNPE----KLAFVTQTTLSMDDTSRV 178
Query: 196 GKLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGGW 250
++ + F + + IC ATQ RQDA+ ++ +E D++LVVG
Sbjct: 179 -------------IDALRSRFPAIGGPRKDDICYATQNRQDAVKQLADE-CDVVLVVGSP 224
Query: 251 NSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGIT 310
NSSN++ L+E+AE P+Y ID + + + +W G IGIT
Sbjct: 225 NSSNSNRLRELAERMATPAYLIDGAEDM-----------------QRSWF-DGVERIGIT 266
Query: 311 SGASTPDKAVEDVLKKV 327
+GAS P+ V V++++
Sbjct: 267 AGASAPEVLVRGVIQQL 283
>gi|167588718|ref|ZP_02381106.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
ubonensis Bu]
Length = 313
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 132/309 (42%), Gaps = 66/309 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V + L + + ++ D V G V + A G A
Sbjct: 33 VYVRHEIVHNRHVVENLRNKGARFV------EELDEVPHGAVAIFSAHGVAQTVERDAET 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKE 135
+ + ++D TCP V+KV ++ I+ G H E T G+ +V++ E
Sbjct: 87 RGLDVLDATCPLVTKVHVQGRQYVAAGRRLILIGHAGHPEVEGTIGQIPGEVTLVQSEAE 146
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
+ L T A++ QTT+ +T I
Sbjct: 147 VDT---------LTLPVDTPVAYV-----------------------TQTTLSVDDTRGI 174
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
+ +++ G + + IC ATQ RQ A+ ++ +VD++LVVG NSSN+
Sbjct: 175 IEALQRRFTDIVGPDTRD--------ICYATQNRQAAVREL-SAQVDVLLVVGATNSSNS 225
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L+EI + G+PSY + G+++ K W Q T+G+T+GAS
Sbjct: 226 NRLREIGTESGVPSYLVAD------GSEV-----------KAEWFADAQ-TVGLTAGASA 267
Query: 316 PDKAVEDVL 324
P++ VEDV+
Sbjct: 268 PEEMVEDVI 276
>gi|407804440|ref|ZP_11151263.1| LytB protein [Alcanivorax sp. W11-5]
gi|407021629|gb|EKE33394.1| LytB protein [Alcanivorax sp. W11-5]
Length = 310
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 150/330 (45%), Gaps = 74/330 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +E++HN V + L A + VEE V +V+ A G +
Sbjct: 33 VYVRHEVVHNRFVVEDLR--ARGAVFVEE----LHEVPDDAIVIFSAHGVSRAVQDEAGR 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V ++ + SI+ G H E T G+Y
Sbjct: 87 RELKVFDATCPLVTKVHMEVIRYSREGRESILIGHEGHPEVEGTM---GQY--------- 134
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVS--KGFDPDVDLVKVGIANQTTMLKGETEE 194
D GG++ +L + ++ V+ + +P+ K+ QTT+ +T
Sbjct: 135 ----DRRHGGDI---------YLVEDEQDVANLQVRNPE----KLAFVTQTTLSVDDTAR 177
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFN-----TICDATQERQDAMYKMVEEKVDLILVVGG 249
+ ++ + E F S + IC AT RQDA+ ++ E DL+LVVG
Sbjct: 178 V-------------IDALRERFPSIHGPRREDICYATTNRQDAVRQLALE-CDLVLVVGS 223
Query: 250 WNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGI 309
NSSN++ L+E+AE G P+Y ID +I P WL +G+ ++G+
Sbjct: 224 PNSSNSNRLRELAERCGTPAYLIDEPGQIDP-----------------VWL-EGKRSVGV 265
Query: 310 TSGASTPDKAVEDVLKKVFEIKREEALQLA 339
T+GAS P++ V+ V+ + + + ++LA
Sbjct: 266 TAGASAPEELVKRVVSHLQSLGGQVPVELA 295
>gi|389684227|ref|ZP_10175556.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
chlororaphis O6]
gi|388551898|gb|EIM15162.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
chlororaphis O6]
Length = 309
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 136/317 (42%), Gaps = 70/317 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAA--VEEMVTL 74
+++ +EI+HN V L + VEE D V +V+ A G A VE+
Sbjct: 33 VYVRHEIVHNQHVVDSLRRKGA--LFVEE----LDEVPANALVIFSAHGVARVVEDQA-- 84
Query: 75 NNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-ASFAGKYIIVKNM 133
++++++D TCP VSKV ++ Y I+ G+ H E + T + ++ +
Sbjct: 85 RQRHLRVLDATCPLVSKVHNQGRQYAARGYRLILIGEPGHPEVLGTLGQIPAQVTVLLTV 144
Query: 134 KEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETE 193
+ E L ++ T A++ QTT+ +T
Sbjct: 145 AQVE---------ALEFAADTPLAYI-----------------------TQTTLSVDDTR 172
Query: 194 EIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSS 253
++ + + + G + IC A Q RQ A+ + + VDL+LVVG S+
Sbjct: 173 QVVAALRRRYPQIVGPDT--------RDICYAVQNRQVAV-RALSACVDLVLVVGSQKSA 223
Query: 254 NTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGA 313
N+ L++IA + GIPSY I + + + W + + T+GIT+GA
Sbjct: 224 NSVTLRDIAGESGIPSYLIADGRAL-----------------RREWFDR-RPTVGITAGA 265
Query: 314 STPDKAVEDVLKKVFEI 330
STP+ ++DVL + I
Sbjct: 266 STPESMIDDVLAALARI 282
>gi|257057116|ref|YP_003134948.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Saccharomonospora viridis DSM 43017]
gi|256586988|gb|ACU98121.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Saccharomonospora viridis DSM 43017]
Length = 327
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 138/318 (43%), Gaps = 73/318 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ EI+HN V L + V I V+E + V +G +VV A G +
Sbjct: 43 IYVRKEIVHNKYVVDTLRKRGV--IFVDETSE----VPEGSLVVFSAHGVSPAVHAEAAE 96
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+N++ +D TCP V+KV V + + DY ++ G HEE TA A + + + E
Sbjct: 97 RNLRTIDATCPLVTKVHREVVRFARDDYDILLIGHEGHEEVEGTAGEAPDRVQLVDTPE- 155
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
+ K V DP KV +QTT+
Sbjct: 156 -----------------------DVHKVTVR---DPS----KVVWVSQTTLS-------- 177
Query: 197 KLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGGWN 251
V++TM R V + E F IC AT RQ A+ M E DL+LVVG N
Sbjct: 178 --VDETMER---VNQLKERFPELADPPSEDICYATSNRQTAVKAMAPE-CDLVLVVGSQN 231
Query: 252 SSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITS 311
SSN+ L E+A + G + A+ + + V+ E WL +G TIG+TS
Sbjct: 232 SSNSKRLVEVA---------------LQAGARDAHLIDYAHEVD-EKWL-EGVETIGVTS 274
Query: 312 GASTPDKAVEDVLKKVFE 329
GAS PD V ++L+K+ E
Sbjct: 275 GASVPDVLVMELLEKLAE 292
>gi|332530378|ref|ZP_08406323.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Hylemonella
gracilis ATCC 19624]
gi|332040189|gb|EGI76570.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Hylemonella
gracilis ATCC 19624]
Length = 320
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 136/313 (43%), Gaps = 68/313 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V L+ A I +EE D V G +V A G +
Sbjct: 46 IYVRHEIVHNTYVVNDLK--AKGAIFIEE----LDDVPPGATLVFSAHGVSRAVQREAER 99
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ QI D TCP V+KV V K K Y I+ G H E T
Sbjct: 100 RGFQIFDATCPLVTKVHVEVAKLHKEGYEFIMIGHKGHPEVEGTM--------------- 144
Query: 137 EYVCDYILGGELNGSSST--KEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEE 194
G+L+ EA + + + A S+ K+ + QTT+ ++
Sbjct: 145 ---------GQLDSGIHLVEDEADVARVRLAQSE---------KLAVVTQTTL---SVDD 183
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
++ R V + IC ATQ RQDA+ K++ +VD+++VVG SSN
Sbjct: 184 AAGILAAVKARFPQVREPKQ-----QDICYATQNRQDAV-KVLSGQVDVLVVVGSPTSSN 237
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
++ L+E+A RG+ +Y +D+ + + +W +G+ +G+T+GAS
Sbjct: 238 SNRLREVAHKRGVAAYMVDNADEL-----------------QADWF-EGKARVGLTAGAS 279
Query: 315 TPDKAVEDVLKKV 327
P+ V+ V++++
Sbjct: 280 APEILVQQVIERI 292
>gi|227494771|ref|ZP_03925087.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Actinomyces
coleocanis DSM 15436]
gi|226831771|gb|EEH64154.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Actinomyces
coleocanis DSM 15436]
Length = 349
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 134/321 (41%), Gaps = 77/321 (23%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ EI+HN V + L E I VEE D V +G VV A G +
Sbjct: 53 IYVRKEIVHNRYVVETLSERGA--IFVEE----TDQVPEGARVVFSAHGVSPAVHEEAAK 106
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYI-IVKNMKE 135
+ + +D TCP V+KV + K DY ++ G HEE T A +I IV E
Sbjct: 107 RKLLTIDATCPLVTKVHKEAVRFAKADYDIVLVGHEGHEEVEGTYGEAPDHIQIVGTPDE 166
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
+ V + DP+ K+ +QTT+ ET+E
Sbjct: 167 VDKV----------------------------QVRDPE----KIVWLSQTTLSVDETKET 194
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNT-----ICDATQERQDAMYKMVEEKVDLILVVGGW 250
V+ + E F N IC ATQ RQ+A+ K + D+++VVG
Sbjct: 195 -------------VDRLRERFPDLNNPPSDDICYATQNRQEAV-KTIAPNADVMIVVGSA 240
Query: 251 NSSNTSHLQEIAEDRGI-PSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGI 309
NSSN+ L E+A D G +Y ID + P W+ + T+G+
Sbjct: 241 NSSNSVRLVEVALDAGAGAAYRIDKAVELDPA-----------------WVENAE-TVGL 282
Query: 310 TSGASTPDKAVEDVLKKVFEI 330
TSGAS P+ V DV+ K+ E+
Sbjct: 283 TSGASVPEILVRDVITKLQEL 303
>gi|417954637|ref|ZP_12597669.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio
orientalis CIP 102891 = ATCC 33934]
gi|342814913|gb|EGU49844.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio
orientalis CIP 102891 = ATCC 33934]
Length = 317
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 140/315 (44%), Gaps = 67/315 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L++ I VEE V ++V+ A G +
Sbjct: 33 IYVRHEVVHNRFVVEGLKQRGA--IFVEE----LSEVPDDNIVIFSAHGVSQAVRKEAKQ 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT----ASFAGKYIIVKN 132
+++ + D TCP V+KV V + + ++ G H E T AS G +V+
Sbjct: 87 RDLTVFDATCPLVTKVHMEVARASRKHMEVVLIGHVGHPEVEGTMGQYASDEGGMYLVER 146
Query: 133 MKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGET 192
++ + K K+ V DP+ + +QTT+ ET
Sbjct: 147 PED-----------------------VLKLKELVK---DPN----HLHYVSQTTLSVDET 176
Query: 193 EEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNS 252
++ + + + G + IC ATQ RQDA+ +M + VD+++VVG NS
Sbjct: 177 ADVIEELRRVFPDIQGPRK--------DDICYATQNRQDAVREMATD-VDVVIVVGSKNS 227
Query: 253 SNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSG 312
SN++ L+E+AE G P Y D + I P W +G++ +G+T+G
Sbjct: 228 SNSTRLKELAEKLGTPGYLTDCPEDIEP-----------------KWF-EGKVKVGVTAG 269
Query: 313 ASTPDKAVEDVLKKV 327
AS P++ V +L+++
Sbjct: 270 ASAPEELVNQILERI 284
>gi|421743613|ref|ZP_16181666.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Streptomyces sp. SM8]
gi|406687990|gb|EKC91958.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Streptomyces sp. SM8]
Length = 332
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 143/330 (43%), Gaps = 75/330 (22%)
Query: 2 AFIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVL 61
A IA E + I++ +EI+HN V + LE I VEE + V +G +V+
Sbjct: 29 AVIAVEKALEQYGSPIYVRHEIVHNKYVVQTLERKGA--IFVEETAE----VPEGSIVMF 82
Query: 62 PAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATA 121
A G A + + +D TCP V+KV + + DY ++ G HEE + T+
Sbjct: 83 SAHGVAPTVHAEAAERKLATIDATCPLVTKVHKEAVRFAQDDYDILLIGHEGHEEVIGTS 142
Query: 122 SFAGKYI-IVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVG 180
A +I +V ++ E V E+ S KV
Sbjct: 143 GEAPDHITLVDGPEDVENV-------EVRDDS-------------------------KVV 170
Query: 181 IANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYK 235
+QTT+ ET E V+ + E F + IC ATQ RQ A+ +
Sbjct: 171 WLSQTTLSVDETMET-------------VDRLKEKFPQLISPPSDDICYATQNRQIAVKQ 217
Query: 236 MVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVE 295
M + DL++VVG NSSN+ L E+A +G G + A+ + E ++
Sbjct: 218 M-GGQADLVIVVGSKNSSNSVRLVEVA---------------LGAGARDAHLVDFAEEID 261
Query: 296 KENWLPKGQITIGITSGASTPDKAVEDVLK 325
E WL +G T+G+TSGAS PD VE VL+
Sbjct: 262 -EAWL-EGVSTVGVTSGASVPDVLVEGVLE 289
>gi|227487859|ref|ZP_03918175.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227542500|ref|ZP_03972549.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Corynebacterium
glucuronolyticum ATCC 51866]
gi|227092186|gb|EEI27498.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227181698|gb|EEI62670.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Corynebacterium
glucuronolyticum ATCC 51866]
Length = 337
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 140/314 (44%), Gaps = 64/314 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ EI+HN V L E I V+E V + VV A G + +
Sbjct: 55 VYVRKEIVHNRYVVDTLAERGA--IFVDETTD----VPEDAHVVFSAHGVSPAVRGEAKS 108
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
N+ +D TCP V+KV V++ + YT + G HEE T M EA
Sbjct: 109 LNLNTLDATCPLVTKVHNEVKRFDRDGYTILFIGHKGHEEVEGT------------MGEA 156
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
+ + G A +++ + F P+ L+ + +QTT+ ET EI
Sbjct: 157 PHTTHLVDG----------PAGVDELPE-----FGPEEKLIWL---SQTTLSVDETMEI- 197
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
V K R +EN + IC ATQ RQ A+ K + K DL++VVG NSSN+
Sbjct: 198 --VNKLHARYPQLENPPS-----DDICYATQNRQSAV-KAIAPKCDLLIVVGSQNSSNSK 249
Query: 257 HLQEIAEDRGIPS-YWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
L+E+ + G + Y ID +I +++WL +G T+G+TSGAS
Sbjct: 250 RLREVGVESGAKAGYLIDYASQI-----------------EDSWL-EGVNTVGVTSGASV 291
Query: 316 PDKAVEDVLKKVFE 329
P+ V+DVL + E
Sbjct: 292 PEILVKDVLATLDE 305
>gi|289765993|ref|ZP_06525371.1| LytB protein [Fusobacterium sp. D11]
gi|289717548|gb|EFD81560.1| LytB protein [Fusobacterium sp. D11]
Length = 827
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 142/312 (45%), Gaps = 61/312 (19%)
Query: 16 KIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLN 75
K +I ++HN V + ++ + + EE + D + + D+VV+ A G + + L
Sbjct: 31 KKYILGMLVHNKQVVEDMQRKGFKLVTEEELLQDVDSLKENDIVVIRAHGTSKKVHEKLK 90
Query: 76 NKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKE 135
+ V++ D TC +V+K+ +E + Y+ + G H E SFA I ++ +E
Sbjct: 91 ERKVKVFDATCIFVNKIRQEIEIANEKGYSILFMGDRDHPEVKGVISFADDIQIFESYEE 150
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
A K K + K + ++ QTT+ K + EE+
Sbjct: 151 AT-----------------------KLKIDLDKTY---------LLSTQTTLNKRKFEEV 178
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
+KF EN ++ I F+ IC AT RQ A+ + KV+L++VVG SSNT
Sbjct: 179 ---------KKFFKENY-KNVIIFDKICGATAVRQKAVEDLAV-KVELMIVVGDTKSSNT 227
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
L EI++ +Y I++E+++ + G+ +GIT+GAST
Sbjct: 228 KKLYEISKKLNDNTYLIENEEQLDLD------------------IFSGKKVVGITAGAST 269
Query: 316 PDKAVEDVLKKV 327
P++ + ++ KK+
Sbjct: 270 PEETIMNIEKKI 281
>gi|429758283|ref|ZP_19290800.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Actinomyces sp.
oral taxon 181 str. F0379]
gi|429173440|gb|EKY14959.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Actinomyces sp.
oral taxon 181 str. F0379]
Length = 350
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 138/313 (44%), Gaps = 73/313 (23%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ EI+HN V + L + + ++ D V +G VV A G + E
Sbjct: 51 VYVRKEIVHNKFVVESLTKRGAIFV------QETDQVPEGARVVFSAHGVSPEVHAVAAQ 104
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++ +D TCP V+KV ++ K DY I+ G HEE T A ++I V E
Sbjct: 105 RHLATIDATCPLVTKVHREAVRYAKDDYDIILVGHEGHEEVEGTFGEAPEHIQVVGTPE- 163
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
+ V + DP+ +V +QTT+ ET +
Sbjct: 164 ------------------------EVDNLVVR--DPE----RVVWISQTTLSVDETRQT- 192
Query: 197 KLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGGWN 251
V+ + + F + IC ATQ RQ A+ K++ +VD+++VVG N
Sbjct: 193 ------------VDRLRQRFPKLVDPPSDDICYATQNRQGAV-KVIAPQVDVMVVVGSAN 239
Query: 252 SSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITS 311
SSN+ L ++A + G+P+ AY++ E +++E W G T+G+TS
Sbjct: 240 SSNSVRLVDVALESGVPA---------------AYRIDKAEELQEE-WF-AGAKTVGLTS 282
Query: 312 GASTPDKAVEDVL 324
GAS P+ V DV+
Sbjct: 283 GASVPEILVRDVI 295
>gi|326386883|ref|ZP_08208498.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Novosphingobium
nitrogenifigens DSM 19370]
gi|326208686|gb|EGD59488.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Novosphingobium
nitrogenifigens DSM 19370]
Length = 328
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 128/322 (39%), Gaps = 64/322 (19%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V L + + D V G V + A G A
Sbjct: 46 VYVRHEIVHNKHVVDTLRAKGAVFV------DELDEVPAGAVTIFSAHGVARSVEKDAEE 99
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ + + D TCP V+KV ++ K T I+ G H E + T + + + E
Sbjct: 100 RGLPVFDATCPLVTKVHVQGRRYVKAGRTLILIGHAGHAEVIGTLGQIDAPVHLVSTAED 159
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
D L T A++ QTT+ +T +
Sbjct: 160 VDSLDLPL--------DTPLAYV-----------------------TQTTLSVDDTRSVI 188
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+ + G + N IC ATQ RQ A+ ++ K DL++VVG NSSN++
Sbjct: 189 QAIHARFPDVIGPD--------INEICYATQNRQTAVRELAG-KSDLLIVVGARNSSNSN 239
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L+EI + G+P++ +D + P +WL T+GIT+GAS P
Sbjct: 240 RLKEIGLEAGVPAHLVDDGAGVDP-----------------SWLDNID-TVGITAGASAP 281
Query: 317 DKAVEDVLKKVFEIKREEALQL 338
D V+ V+ ++ I+ QL
Sbjct: 282 DALVDSVISRLAAIRSVTVTQL 303
>gi|415941247|ref|ZP_11555737.1| 4-hydroxy-3-methylbu [Herbaspirillum frisingense GSF30]
gi|407759053|gb|EKF68801.1| 4-hydroxy-3-methylbu [Herbaspirillum frisingense GSF30]
Length = 322
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 139/321 (43%), Gaps = 78/321 (24%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V L I ++ V G V+ A G +
Sbjct: 40 IYVRHEIVHNAYVVNDLRAKGAVFI------EELADVPAGSTVIFSAHGVSKAIQAEAAE 93
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATA--SFAGKYIIVKNMK 134
+ + + D TCP V+KV V K ++ I+ G H E T + AG +++
Sbjct: 94 RGLTVFDATCPLVTKVHMEVAKMRREGREIIMIGHAGHPEVEGTMGQTEAGMHLV----- 148
Query: 135 EAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEE 194
E V D + + + A DP + + +QTT+ +T E
Sbjct: 149 --ETVDD-----------------VARLQVA-----DPAL----LAYVSQTTLSVDDTAE 180
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFN-----TICDATQERQDAMYKMVEEKVDLILVVGG 249
I + + E F + + IC AT RQ+A+ K + +VD+++VVG
Sbjct: 181 I-------------IAALRERFPAISEPKKGDICYATTNRQEAV-KFMAPQVDVVIVVGS 226
Query: 250 WNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGI 309
NSSN++ L+E+AE +G+P++ +D+ I P W+ G+ IG+
Sbjct: 227 PNSSNSNRLRELAEKKGVPAFMVDNAALIDP-----------------QWI-SGRQRIGV 268
Query: 310 TSGASTPDKAVEDVLKKVFEI 330
T+GAS P+ V+ V+ ++ EI
Sbjct: 269 TAGASAPEVLVQAVIDRIKEI 289
>gi|187921663|ref|YP_001890695.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
phytofirmans PsJN]
gi|187720101|gb|ACD21324.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia
phytofirmans PsJN]
Length = 314
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 132/311 (42%), Gaps = 70/311 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V L + + + ++ D V +G V + A G A
Sbjct: 33 VYVRHEIVHNRHVVDNLRQKGARFV------EELDEVPQGAVAIFSAHGVAQTVERDAEA 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKE 135
+ + ++D TCP V+KV ++ T I+ G H E T GK ++V++ E
Sbjct: 87 RGLDVLDATCPLVTKVHVQGRQYVGAGRTLILIGHAGHPEVEGTIGQIPGKVLLVQSEAE 146
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
+ D VD + QTT+ +T I
Sbjct: 147 VAH-------------------------------LDLPVD-TPLAYVTQTTLSVDDTRGI 174
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNT--ICDATQERQDAMYKMVEEKVDLILVVGGWNSS 253
++R+F + +T IC ATQ RQ A+ ++ ++VD++LVVG NSS
Sbjct: 175 ----IDALLRRF------TDIVGPDTRDICYATQNRQAAVREL-SKQVDVLLVVGATNSS 223
Query: 254 NTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGA 313
N++ L+EI + G+ SY + + P W Q T+GIT+GA
Sbjct: 224 NSNRLREIGSESGVASYLVADGSEVKP-----------------EWFANVQ-TVGITAGA 265
Query: 314 STPDKAVEDVL 324
S P++ V++V+
Sbjct: 266 SAPEEMVKNVI 276
>gi|332527971|ref|ZP_08404005.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Rubrivivax
benzoatilyticus JA2]
gi|332112545|gb|EGJ12338.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Rubrivivax
benzoatilyticus JA2]
Length = 323
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 135/314 (42%), Gaps = 65/314 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V L A I +EE + V G +V A G + +
Sbjct: 37 IYVRHEIVHNTYVVNDLR--AKGAIFIEELAE----VPPGATLVFSAHGVSQAVREEADR 90
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ ++ D TCP V+KV V K + Y I+ G H E T + + E
Sbjct: 91 RGFKVFDATCPLVTKVHVEVAKLAREGYEFIMIGHKGHPEVEGT---------MGQLSEG 141
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
Y+ + E + +G K+ + QTT+ + EI
Sbjct: 142 IYLVEDA----------------EDVPRVQPRGD-------KLAVVTQTTLSVDDAAEIL 178
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
V K +V E IC ATQ RQDA+ K++ VD+++VVG SSN++
Sbjct: 179 AAV------KARFPHVREP--KKQDICYATQNRQDAV-KLIAPAVDVVIVVGSPTSSNSN 229
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L+E+AE G P++ +DS + + WL +G+ +G+T+GAS P
Sbjct: 230 RLRELAERLGTPAHMVDSAADL-----------------QAAWL-EGRSRVGLTAGASAP 271
Query: 317 DKAVEDVLKKVFEI 330
D V+ V+ ++ E+
Sbjct: 272 DILVQQVIARLREL 285
>gi|283798176|ref|ZP_06347329.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium sp.
M62/1]
gi|291074159|gb|EFE11523.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium sp.
M62/1]
Length = 351
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 137/307 (44%), Gaps = 64/307 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I+ IIHN V + LEE V+ I + K++ ++KG VV++ + G E L +
Sbjct: 101 IYTYGPIIHNEEVVRDLEEKGVRVI---DTKEELSALSKG-VVIIRSHGVGREIYEILEH 156
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +VD TCP+V K+ V++ + II G SH E + +V +K A
Sbjct: 157 NGITVVDATCPFVKKIHRIVKEQGEEGRRVIIVGDESHPEVQGIKGWGNDDTLV--IKTA 214
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
E LE+ P D ++ + QTT + ++I
Sbjct: 215 EE--------------------LERL---------PLRDGERLCVVAQTTFNYNKFKDI- 244
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
VEK ++ + + NTIC+ATQERQ K + +VD ++V+GG NSSNT
Sbjct: 245 --VEKISKTRYDI-------LVLNTICNATQERQ-VEAKQIASEVDAMIVIGGKNSSNTQ 294
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L EI +Y+I + + P EK + ++GIT+GASTP
Sbjct: 295 KLFEICRRECKNTYYIQTLSDLKP--------------EKAGSVR----SVGITAGASTP 336
Query: 317 DKAVEDV 323
+ +E+V
Sbjct: 337 NNIIEEV 343
>gi|452958573|gb|EME63926.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Amycolatopsis
decaplanina DSM 44594]
Length = 337
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 138/329 (41%), Gaps = 75/329 (22%)
Query: 2 AFIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVL 61
A IA E + +++ EI+HN V + L E V I V+E + V +G++VV
Sbjct: 43 AVIAVEKALELYGAPVYVRKEIVHNRHVVETLRERGV--IFVDETSE----VPEGELVVF 96
Query: 62 PAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATA 121
A G + +N++ +D TCP V+KV V + K DY ++ G HEE TA
Sbjct: 97 SAHGVSPAVHAEAAERNLRTIDATCPLVTKVHKEVNRFAKDDYDILLIGHEGHEEVEGTA 156
Query: 122 SFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGI 181
A + + + E DVD V++
Sbjct: 157 GEAPDKVQLVDTAE-------------------------------------DVDKVEIRD 179
Query: 182 ANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKM 236
++ L T V++TM R V+ + + F + IC AT RQ A+ M
Sbjct: 180 PSKVIWLSQTTLS----VDETMER---VDQLRDKFPGLADPPSDDICYATTNRQVAVKAM 232
Query: 237 VEEKVDLILVVGGWNSSNTSHLQEIAEDRGI-PSYWIDSEKRIGPGNKIAYKLMHGELVE 295
E DL+LVVG NSSN+ L E+A G S+ ID +
Sbjct: 233 AAE-CDLVLVVGSRNSSNSKRLVEVALKAGARASHLIDFAHEV----------------- 274
Query: 296 KENWLPKGQITIGITSGASTPDKAVEDVL 324
E WL +G T+G+TSGAS P+ V D+L
Sbjct: 275 DEAWL-EGVETVGVTSGASVPEVLVMDLL 302
>gi|237743636|ref|ZP_04574117.1| LytB protein [Fusobacterium sp. 7_1]
gi|229432667|gb|EEO42879.1| LytB protein [Fusobacterium sp. 7_1]
Length = 827
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 142/312 (45%), Gaps = 61/312 (19%)
Query: 16 KIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLN 75
K +I ++HN V + ++ + + EE + D + + D+VV+ A G + + L
Sbjct: 31 KKYILGMLVHNKQVVEDMQRKGFKLVTEEELLQDVDSLKENDIVVIRAHGTSKKVHEKLK 90
Query: 76 NKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKE 135
+ V++ D TC +V+K+ +E + Y+ + G H E SFA I ++ +E
Sbjct: 91 ERKVKVFDATCIFVNKIRQEIEIANEKGYSILFMGDRDHPEVKGVISFADDIQIFESYEE 150
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
A K K + K + ++ QTT+ K + EE+
Sbjct: 151 AT-----------------------KLKIDLDKTY---------LLSTQTTLNKRKFEEV 178
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
+KF EN ++ I F+ IC AT RQ A+ + KV+L++VVG SSNT
Sbjct: 179 ---------KKFFKENY-KNVIIFDKICGATAVRQKAVEDLAV-KVELMIVVGDTKSSNT 227
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
L EI++ +Y I++E+++ + G+ +GIT+GAST
Sbjct: 228 KKLYEISKKLNDNTYLIENEEQLDLD------------------IFSGKKVVGITAGAST 269
Query: 316 PDKAVEDVLKKV 327
P++ + ++ KK+
Sbjct: 270 PEETIMNIEKKI 281
>gi|423137642|ref|ZP_17125285.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Fusobacterium
nucleatum subsp. animalis F0419]
gi|371959436|gb|EHO77122.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Fusobacterium
nucleatum subsp. animalis F0419]
Length = 827
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 143/312 (45%), Gaps = 61/312 (19%)
Query: 16 KIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLN 75
K +I ++HN V + ++ + + EE + D + + D+VV+ A G + + L
Sbjct: 31 KKYILGMLVHNKQVVEDMQRKGFKLVTEEELLQDVDSLEENDIVVIRAHGTSKKVHEKLK 90
Query: 76 NKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKE 135
+ V++ D TC +V+K+ +E + Y+ + G +H E SFA I ++ +E
Sbjct: 91 ERKVKVFDATCIFVNKIRQEIEIANEKGYSILFMGDRNHPEVKGVISFADDIQIFESYEE 150
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
A K K + K + ++ QTT+ K + EE+
Sbjct: 151 AT-----------------------KLKIDLDKTY---------LLSTQTTLNKRKFEEV 178
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
+KF EN ++ I F+ IC AT RQ A+ + KV+L++VVG SSNT
Sbjct: 179 ---------KKFFKENY-KNVIIFDKICGATAVRQKAVEDLAV-KVELMIVVGDTKSSNT 227
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
L EI++ +Y I++E+++ + G+ +GIT+GAST
Sbjct: 228 KKLYEISKKLNDNTYLIENEEQLDLD------------------IFSGKKVVGITAGAST 269
Query: 316 PDKAVEDVLKKV 327
P++ + ++ KK+
Sbjct: 270 PEETIMNIEKKI 281
>gi|217032276|ref|ZP_03437773.1| hypothetical protein HPB128_142g24 [Helicobacter pylori B128]
gi|216946042|gb|EEC24655.1| hypothetical protein HPB128_142g24 [Helicobacter pylori B128]
Length = 210
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 121/272 (44%), Gaps = 62/272 (22%)
Query: 59 VVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETV 118
+++ G +++ L NK V+I D TCP+V K VE K Y ++ G +H E
Sbjct: 1 MIIRTHGIPKQDLEYLKNKGVKITDATCPYVIKPQQIVESMSKEGYQIVLFGDINHPEVK 60
Query: 119 ATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVK 178
S+A +V +N +E L++ K
Sbjct: 61 GVISYATNQALV-----------------INSLEELQEKKLQR----------------K 87
Query: 179 VGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVE 238
V + +QTT ++ KL++ + + VE E I FNTIC+AT Q A + +
Sbjct: 88 VALVSQTT------KQTPKLLQ---IASYLVERCTEVRI-FNTICNATSYNQKAALDLSK 137
Query: 239 EKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKEN 298
E VD+++VVGG SSNT L IA+ SY ++ E + EL
Sbjct: 138 E-VDIMIVVGGKTSSNTKQLLSIAKQHCKDSYLVEDENEL-------------ELA---- 179
Query: 299 WLPKGQITIGITSGASTPDKAVEDVLKKVFEI 330
W KG+ GIT+GASTPD +E+V +K+ I
Sbjct: 180 WF-KGKKLCGITAGASTPDWIIENVKQKISTI 210
>gi|160947387|ref|ZP_02094554.1| hypothetical protein PEPMIC_01321 [Parvimonas micra ATCC 33270]
gi|158446521|gb|EDP23516.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Parvimonas
micra ATCC 33270]
Length = 674
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 149/326 (45%), Gaps = 75/326 (23%)
Query: 15 EKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGA---AVEEM 71
EK++ E+IHNP V ++ + ++ I E ++Q +VL + G ++M
Sbjct: 33 EKVYSYGELIHNPQVVEKFNKNGLKVIDDFEKEEQ-------GTIVLRSHGIHPNIKKKM 85
Query: 72 VTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVK 131
V L ++ +D TCP + ++ +EK + Y II G +H E A + G V
Sbjct: 86 VELGHR---YIDCTCPVLLNIYKKIEKKVENGYEIIIIGDKNHPEIKAMIGYCGDKFCVI 142
Query: 132 NMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGE 191
N KE EA + K KK + I +QTT
Sbjct: 143 NTKE--------------------EAEIIKNKKNLY-------------IISQTT----- 164
Query: 192 TEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWN 251
LVEK ++ NE+ I NTICDAT +RQ++ + + ++VD ++V+GG++
Sbjct: 165 -----NLVEKFFQFSDIIKGKNENVIIENTICDATSKRQNSCEE-ISKRVDCMIVIGGYS 218
Query: 252 SSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITS 311
SSNT+ L ++A+ Y I++ + + YK IG+T+
Sbjct: 219 SSNTNKLYDVAKKHCKNVYRIETFLDLPLKDMAKYK------------------KIGLTA 260
Query: 312 GASTPDKAVEDVLKKVFEIKREEALQ 337
GASTPD +E+V++ + + ++E ++
Sbjct: 261 GASTPDWLIEEVVEGMEILSKDEFME 286
>gi|261250338|ref|ZP_05942914.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio
orientalis CIP 102891 = ATCC 33934]
gi|260939454|gb|EEX95440.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio
orientalis CIP 102891 = ATCC 33934]
Length = 321
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 140/315 (44%), Gaps = 67/315 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L++ I VEE V ++V+ A G +
Sbjct: 37 IYVRHEVVHNRFVVEGLKQRGA--IFVEE----LSEVPDDNIVIFSAHGVSQAVRKEAKQ 90
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT----ASFAGKYIIVKN 132
+++ + D TCP V+KV V + + ++ G H E T AS G +V+
Sbjct: 91 RDLTVFDATCPLVTKVHMEVARASRKHMEVVLIGHVGHPEVEGTMGQYASDEGGMYLVER 150
Query: 133 MKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGET 192
++ + K K+ V DP+ + +QTT+ ET
Sbjct: 151 PED-----------------------VLKLKELVK---DPN----HLHYVSQTTLSVDET 180
Query: 193 EEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNS 252
++ + + + G + IC ATQ RQDA+ +M + VD+++VVG NS
Sbjct: 181 ADVIEELRRVFPDIQGPRK--------DDICYATQNRQDAVREMATD-VDVVIVVGSKNS 231
Query: 253 SNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSG 312
SN++ L+E+AE G P Y D + I P W +G++ +G+T+G
Sbjct: 232 SNSTRLKELAEKLGTPGYLTDCPEDIEP-----------------KWF-EGKVKVGVTAG 273
Query: 313 ASTPDKAVEDVLKKV 327
AS P++ V +L+++
Sbjct: 274 ASAPEELVNQILERI 288
>gi|308178025|ref|YP_003917431.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Arthrobacter
arilaitensis Re117]
gi|307745488|emb|CBT76460.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Arthrobacter
arilaitensis Re117]
Length = 361
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 142/330 (43%), Gaps = 67/330 (20%)
Query: 2 AFIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVL 61
A +A E + +++ +I+HN V LE I VEE ++ V +G +VV
Sbjct: 53 AVVAVEKALEHYGPPVYVRKQIVHNLHVVSELESRGA--IFVEENEE----VPEGALVVF 106
Query: 62 PAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATA 121
A G + + + ++N+Q +D TCP V+KV + K DY ++ G HEE T
Sbjct: 107 SAHGVSPAVVQSAADRNLQTIDATCPLVTKVHREAVRFAKNDYEILLIGHEGHEEVEGTY 166
Query: 122 SFAGKY-IIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVG 180
A + IV N +EA+ V + +PD K+
Sbjct: 167 GEAPEVTTIVNNPEEADTV----------------------------QVKNPD----KLI 194
Query: 181 IANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEK 240
+QTT+ ET E +R+ N + IC AT RQ A+ K + +
Sbjct: 195 WLSQTTLSVDETME--------TVRRLRKRFPNLQDPPSDDICYATTNRQAAI-KTIAPQ 245
Query: 241 VDLILVVGGWNSSNTSHLQEIAEDRGI-PSYWIDSEKRIGPGNKIAYKLMHGELVEKENW 299
DL++VVG NSSN+ L E+A D G SY +D + E W
Sbjct: 246 SDLVIVVGSANSSNSVRLVEVALDHGAKASYRVDFANEV-----------------DEAW 288
Query: 300 LPKGQITIGITSGASTPDKAVEDVLKKVFE 329
+G T+G+TSGAS P+ V +V+ + E
Sbjct: 289 F-EGVSTVGVTSGASVPEVLVREVVALLAE 317
>gi|433602647|ref|YP_007035016.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Saccharothrix
espanaensis DSM 44229]
gi|407880500|emb|CCH28143.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Saccharothrix
espanaensis DSM 44229]
Length = 314
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 133/315 (42%), Gaps = 75/315 (23%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ EI+HN V + L + + D V +G +VV A G + +
Sbjct: 35 VYVRKEIVHNKHVVETLSRRGAIFV------NETDEVPEGALVVFSAHGVSPMVHQEAAD 88
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ ++ +D TCP V+KV ++ + DY ++ G HEE TA A ++I + + +
Sbjct: 89 RQLRTIDATCPLVTKVHNEAKRFAREDYDILLIGHEGHEEVEGTAGEAPEHIQLVDTAQ- 147
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
K V + DP KV +QTT+
Sbjct: 148 ------------------------DVDKVVVR--DPS----KVVWLSQTTLS-------- 169
Query: 197 KLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGGWN 251
V++TM+R V + E F + IC AT RQ A+ M E DL+LVVG N
Sbjct: 170 --VDETMIR---VRQLQERFPDLQEPPSDDICYATSNRQTAVKTMAPE-CDLVLVVGSKN 223
Query: 252 SSNTSHLQEIAEDRGI-PSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGIT 310
SSN+ L E+A G SY +D + P WL +G T+G+T
Sbjct: 224 SSNSVRLVEVALQAGARASYLVDYANEVDPA-----------------WL-EGVTTVGVT 265
Query: 311 SGASTPDKAVEDVLK 325
SGAS PD V ++L+
Sbjct: 266 SGASVPDILVMELLE 280
>gi|347739542|ref|ZP_08870790.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Azospirillum
amazonense Y2]
gi|346917144|gb|EGX99618.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Azospirillum
amazonense Y2]
Length = 292
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 131/312 (41%), Gaps = 66/312 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V + L + + + V G + + A G +
Sbjct: 19 VYVRHEIVHNQHVVEGLRAKGARFV------EDLSEVPAGALTIFSAHGVSRTVEAEAEA 72
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKE 135
+ ++++D TCP VSKV +++ T I+ G H E T G+ +V ++ +
Sbjct: 73 RELRVIDATCPLVSKVHAEGKRYVALGRTVILIGHAGHAEVEGTLGQIPGRTHLVSSVDD 132
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
E L ++ T A++ QTT+ +T +
Sbjct: 133 VE---------ALPLTAETPVAYV-----------------------TQTTLSVDDTRSV 160
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
++ + G E IC ATQ RQ A+ ++ + DLILVVG NSSN+
Sbjct: 161 IAALKHRFVDILGPET--------KDICYATQNRQAAVRELAK-VADLILVVGSANSSNS 211
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L+EI E+ G+PSY + E+ I P WL G +G+T+GAS
Sbjct: 212 NRLREIGEELGVPSYLVPDERAIDPA-----------------WL-AGCGVVGVTAGASA 253
Query: 316 PDKAVEDVLKKV 327
P+ V+ V+ +
Sbjct: 254 PEVLVDGVIATL 265
>gi|331006478|ref|ZP_08329779.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [gamma
proteobacterium IMCC1989]
gi|330419703|gb|EGG94068.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [gamma
proteobacterium IMCC1989]
Length = 315
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 133/310 (42%), Gaps = 64/310 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L + I V+E D V +V+ A G A
Sbjct: 35 IYVRHEVVHNKFVVDSLRDRGA--IFVDE----LDEVPDDKIVIFSAHGVAKAVKNDAER 88
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ + + D TCP V+KV V K+ + I+ G H E T G+Y
Sbjct: 89 RELTVFDATCPLVTKVHLEVTKYSQDGTECILIGHQGHPEVEGTM---GQY--------- 136
Query: 137 EYVCDYILGGELNGSSSTKEA--FLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEE 194
D+ GG++ ++ + K +A+S QTT+ +T +
Sbjct: 137 ----DHANGGDIYLVEDEQDVDNLVVKNPEALS-------------YVTQTTLSMDDTAK 179
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
V + KF N + IC ATQ RQDA+ ++ E DL+LVVG NSSN
Sbjct: 180 ----VIAALRAKFP----NIEGPRTDDICYATQNRQDAVKQLALE-CDLVLVVGSPNSSN 230
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
++ L+E+AE G +Y ID+ I P WL Q +IG+T+GAS
Sbjct: 231 SNRLRELAERCGTEAYLIDTADDINPA-----------------WLNAKQ-SIGVTAGAS 272
Query: 315 TPDKAVEDVL 324
PD ++ V+
Sbjct: 273 APDILIQQVI 282
>gi|153854919|ref|ZP_01996142.1| hypothetical protein DORLON_02148 [Dorea longicatena DSM 13814]
gi|149752621|gb|EDM62552.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Dorea
longicatena DSM 13814]
Length = 285
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 145/323 (44%), Gaps = 65/323 (20%)
Query: 6 YEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFG 65
Y+ ++ EKI+ IIHN V K L V+ + EE K D DVVV+ + G
Sbjct: 23 YKQIEKHQSEKIFTYGPIIHNEEVIKDLRSHGVEVLNGEEELKTVD----ADVVVIRSHG 78
Query: 66 AAVEEMVTLNNKNVQIVDTTCPWVSKVWTSV-EKHKKGDYTSIIHGKYSHEETVATASFA 124
A ++ + + VD TCP+V K+ V E+ KG Y II G H E +A
Sbjct: 79 VAKYIYDIMDERGITCVDATCPFVKKIHKIVAEESAKGSYIVII-GNGEHPEVEGIRGWA 137
Query: 125 GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQ 184
G+ + V E E+F+ P+ + KV I Q
Sbjct: 138 GEQVTVIQTPED----------------------AERFEL-------PEKEQ-KVCIVAQ 167
Query: 185 TTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLI 244
TT + +E+ +++ K +++ + + NTIC+AT+ERQ + + +VD +
Sbjct: 168 TTFNYNKFKELVEIISK---KRYDI-------VVLNTICNATKERQTEA-RQIAARVDAM 216
Query: 245 LVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQ 304
+V+G SSNT L EI ++ + +Y+I + + N L +
Sbjct: 217 VVIGDKRSSNTQKLFEICKEECLNTYYIQTLDDLDI-----------------NQLRSVE 259
Query: 305 ITIGITSGASTPDKAVEDVLKKV 327
++GIT+GASTP+K +E+V V
Sbjct: 260 -SVGITAGASTPNKIIEEVQNNV 281
>gi|444921164|ref|ZP_21241002.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Wohlfahrtiimonas chitiniclastica SH04]
gi|444507900|gb|ELV08074.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Wohlfahrtiimonas chitiniclastica SH04]
Length = 313
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 148/327 (45%), Gaps = 71/327 (21%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
I +A +QF I++ +E++HN V L + + ++ D V +V+ A
Sbjct: 23 IVEKALEQF-GAPIYVRHEVVHNKFVVDGLRDRGAVFV------QELDEVPDDAIVIFSA 75
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT--- 120
G A + + + +++ D TCP V+KV V + K +I+ G H E T
Sbjct: 76 HGVAKAVQMEADRRGLKVFDATCPLVTKVHMEVSRDAKNARDTILIGHAGHPEVEGTMGQ 135
Query: 121 --ASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVK 178
A+ G+ +V+++K+A+ + +N +PD
Sbjct: 136 FDAAHGGEIYLVEDVKDADNLV-------VN---------------------NPD----N 163
Query: 179 VGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVE 238
V QTT+ +T+EI +++ R F V + + IC ATQ RQDA+ ++
Sbjct: 164 VSYVTQTTLSIDDTKEI---IDRLRAR-FPVIAAPKK----DDICYATQNRQDAVREL-S 214
Query: 239 EKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKEN 298
++ LI VVG NSSN++ L+E+AE +G +Y ID + I +
Sbjct: 215 KQCSLIFVVGSKNSSNSNRLRELAEKQGAMAYLIDRAEDI------------------DL 256
Query: 299 WLPKGQITIGITSGASTPDKAVEDVLK 325
+ K IG+T+GAS P+ V++V++
Sbjct: 257 AVLKDHDNIGVTAGASAPEVLVQEVIE 283
>gi|197122753|ref|YP_002134704.1| hydroxymethylbutenyl pyrophosphate reductase [Anaeromyxobacter sp.
K]
gi|238689866|sp|B4UEK4.1|ISPH_ANASK RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|196172602|gb|ACG73575.1| hydroxymethylbutenyl pyrophosphate reductase [Anaeromyxobacter sp.
K]
Length = 278
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 126/303 (41%), Gaps = 73/303 (24%)
Query: 23 IIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIV 82
IIHNP R E V + V G VV+ GA EE+ + +++V
Sbjct: 39 IIHNPQAVARFSEKGVGTV------NGIGEVTDGTTVVVRTHGAVREELERAEARGLEVV 92
Query: 83 DTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDY 142
D TCP+V ++ + Y +I G +H E S++ E C
Sbjct: 93 DGTCPYVKYPQAMAQRLSREGYHIVIVGDANHAEIKGVISYS------------EQPCTV 140
Query: 143 ILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKT 202
+ G G P++ KV + QTT + E E ++V
Sbjct: 141 VKPG----------------------GPVPEIKAKKVAVIAQTTCIGAEFE---RVVGVL 175
Query: 203 MMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIA 262
+R ++ + NTIC+ T+ERQ A + + +VD ++VVGG NS+NT HL EI
Sbjct: 176 ALR-------HKEVRAVNTICNDTEERQ-ADARALASEVDAVVVVGGKNSANTRHLAEIC 227
Query: 263 EDRGI-PSYW-IDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAV 320
R I P W +++E +G W +G +G+++GASTPD V
Sbjct: 228 --RAIQPRTWHVETEAELGAA-----------------WF-EGCRVVGLSAGASTPDWVV 267
Query: 321 EDV 323
E V
Sbjct: 268 EGV 270
>gi|291288842|ref|YP_003505658.1| hydroxymethylbutenyl pyrophosphate reductase [Denitrovibrio
acetiphilus DSM 12809]
gi|290886002|gb|ADD69702.1| hydroxymethylbutenyl pyrophosphate reductase [Denitrovibrio
acetiphilus DSM 12809]
Length = 843
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 148/330 (44%), Gaps = 82/330 (24%)
Query: 7 EARKQFPEEKIWITNEIIHNPTVNKRLEE--MAVQNIPVEEGKKQFDVVNKGDVVVLPAF 64
+ KQF ++ IIHNP + + E + V P E VN+ + VV+ +
Sbjct: 24 DTSKQFT--GVYTLGPIIHNPQIVSKFAENGIGVCYNPEE--------VNEDNTVVVRSH 73
Query: 65 GAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA 124
G E TL ++ V +VD TCP+V K S +K +++G+ +H E + SF
Sbjct: 74 GVTKETYATLASRKVNVVDATCPFVKKAQNSAKKLGNEGAVVVVYGEKNHPEVKSIVSFI 133
Query: 125 -GKYIIVKNMKEAEYVCD---YILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVG 180
+Y+IV ++ EA + D Y L + +S + FD +++K
Sbjct: 134 DSRYVIVSDVGEASVLPDENCYALVAQTTQNSES---------------FDKIAEILKT- 177
Query: 181 IANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEK 240
+ KL+ K NTIC+AT RQ + + +K
Sbjct: 178 -------------KCDKLIIK------------------NTICNATSLRQASAIDLA-KK 205
Query: 241 VDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWL 300
VD+++V+GG NS NT+ L EI ++ ++ I+++ E ++KE +
Sbjct: 206 VDIMVVIGGRNSGNTTRLYEICKNICANTHHIETK----------------EELKKEIF- 248
Query: 301 PKGQITIGITSGASTPDKAVEDVLKKVFEI 330
G +GIT+GASTP VE+V++ + E+
Sbjct: 249 -DGCRKVGITAGASTPGYLVEEVIEFLKEV 277
>gi|209515910|ref|ZP_03264771.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia sp.
H160]
gi|209503568|gb|EEA03563.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia sp.
H160]
Length = 314
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 136/311 (43%), Gaps = 70/311 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V L + + + ++ D V +G V + A G A
Sbjct: 33 VYVRHEIVHNRHVVDNLRQKGARFV------EELDEVPQGAVAIFSAHGVAQTVERDAEA 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKE 135
+ + ++D TCP V+KV ++ T I+ G H E T G ++V++ E
Sbjct: 87 RGLDVLDATCPLVTKVHVQGRQYVAAGRTLILIGHAGHPEVEGTIGQIPGTVLLVQS--E 144
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
AE +L+ + T A++ QTT+ +T I
Sbjct: 145 AEV-------AKLDLPAETPLAYV-----------------------TQTTLSVDDTRGI 174
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNT--ICDATQERQDAMYKMVEEKVDLILVVGGWNSS 253
++R+F + +T IC ATQ RQ A+ ++ +E VD++LVVG NSS
Sbjct: 175 ----IDALLRRF------TDIVGPDTRDICYATQNRQAAVRELSKE-VDVLLVVGATNSS 223
Query: 254 NTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGA 313
N++ L+EI + G+ SY + + P W + T+GIT+GA
Sbjct: 224 NSNRLREIGSESGVASYLVADGSEVKP-----------------EWFANVR-TVGITAGA 265
Query: 314 STPDKAVEDVL 324
S P++ VE+V+
Sbjct: 266 SAPEEMVENVI 276
>gi|32034925|ref|ZP_00135016.1| COG0761: Penicillin tolerance protein [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126208984|ref|YP_001054209.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
gi|166217141|sp|A3N2G8.1|ISPH_ACTP2 RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|126097776|gb|ABN74604.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
Length = 314
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 137/317 (43%), Gaps = 73/317 (23%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L+ A + VEE D V G +V+ A G + E
Sbjct: 33 IYVRHEVVHNRFVVDGLK--AKGAVFVEE----LDEVPDGAIVIFSAHGVSQEVRQEAKR 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V + K +I+ G H E + T G+Y N
Sbjct: 87 RGLKVFDATCPLVTKVHMQVARASKKGTKAILIGHEGHPEVIGTM---GQY---DNQDAG 140
Query: 137 EYVCDYILG-GELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
++ + + +L SS F+ QTT+ +T ++
Sbjct: 141 IFLVESVEDIAKLPVSSQDDLTFM-----------------------TQTTLSIDDTSDV 177
Query: 196 GKLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGGW 250
+E + E + + N IC AT RQ A+ ++ ++ L+LVVG
Sbjct: 178 -------------IEALKEKYPAIQGPRKNDICYATTNRQQAVRELAKQS-QLVLVVGSK 223
Query: 251 NSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGIT 310
NSSN++ L E+A G+PS ID + I P +WL G TIGIT
Sbjct: 224 NSSNSNRLAELASRMGVPSKLIDGPQDIDP-----------------SWL-DGVETIGIT 265
Query: 311 SGASTPDKAVEDVLKKV 327
+GAS P+ V+ V++ +
Sbjct: 266 AGASAPEVLVQSVVEHL 282
>gi|334123514|ref|ZP_08497539.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Enterobacter
hormaechei ATCC 49162]
gi|333390723|gb|EGK61855.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Enterobacter
hormaechei ATCC 49162]
Length = 316
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 138/322 (42%), Gaps = 61/322 (18%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L E I +Q V G +++ A G + +
Sbjct: 33 IYVRHEVVHNRYVVDSLRERGAIFI------EQISEVPDGAILIFSAHGVSQAVRNEAKS 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++ + D TCP V+KV V + + SI+ G H E T G+Y N +
Sbjct: 87 RDLTVFDATCPLVTKVHMEVARASRRGEESILIGHAGHPEVEGTM---GQY---SNPEGG 140
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
Y+ + S ++ F K F QTT+ +T ++
Sbjct: 141 MYLVE-----------SPEDVFTLNVKNEARLSF-----------MTQTTLSVDDTSDVI 178
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+ + + G + IC AT RQ+A+ + + E+ D++LVVG NSSN++
Sbjct: 179 DALRQRFPKIVGPRK--------DDICYATTNRQEAV-RALAEQADVVLVVGSKNSSNSN 229
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L E+A+ G ++ ID I +E W+ K +G+T+GAS P
Sbjct: 230 RLAELAQRMGKAAFLIDDATDI-----------------QEAWV-KNAACVGVTAGASAP 271
Query: 317 DKAVEDVLKKVFEIKREEALQL 338
D V++V+ ++ E+ EA+ L
Sbjct: 272 DILVQNVIARLQEMGGGEAVPL 293
>gi|291522293|emb|CBK80586.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and
DMAPP forming) [Coprococcus catus GD/7]
Length = 637
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 145/325 (44%), Gaps = 68/325 (20%)
Query: 15 EKIWITNEIIHNPTVNKRLEEMAVQNI-PVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVT 73
+K++ IIHN TV + LE V+ + +EE G +++ + G + EE+
Sbjct: 30 DKVYTYGPIIHNETVVEDLEAKGVKVVHSIEEAAAL-----AGGTMIIRSHGVSKEEIDL 84
Query: 74 LNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKY-IIVKN 132
L IVD TCP+V K+ VEK+ + Y II G H E A + + + +I+++
Sbjct: 85 LKQMGFDIVDATCPFVKKIHHIVEKYSEQGYGIIIIGSADHPEVQAISGWCKEPPVIIES 144
Query: 133 MKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGET 192
+EA FK DPD K+ + +QTT
Sbjct: 145 EEEAR-----------------------NFKT------DPDK---KLCLVSQTTF---NY 169
Query: 193 EEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNS 252
+ LVE + + + NTIC+AT+ERQ + + +VD ++V+GG S
Sbjct: 170 NKFQLLVEIISKKGYDIR-------CLNTICNATEERQSEA-REIAGRVDAMIVIGGRQS 221
Query: 253 SNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSG 312
SNT L +I ++ +Y+I + LV+ + + +GIT+G
Sbjct: 222 SNTQKLYDICKNECKNTYYIQT------------------LVDLDLKTFESIGNVGITAG 263
Query: 313 ASTPDKAVEDVLKKVFEIKREEALQ 337
ASTP+ +E+V + E+ E++ +
Sbjct: 264 ASTPNNIIEEVHTNMSEMGNEQSFE 288
>gi|410726916|ref|ZP_11365147.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Clostridium sp. Maddingley MBC34-26]
gi|410599891|gb|EKQ54430.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Clostridium sp. Maddingley MBC34-26]
Length = 634
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 148/320 (46%), Gaps = 68/320 (21%)
Query: 5 AYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAF 64
A +K++ KI+ +IHN V LEE + +I E+ K + GDV+V+ +
Sbjct: 23 ALRIQKEY-NSKIYTLGPLIHNNDVVTFLEENNIFSIEFEDINK----LKTGDVIVIRSH 77
Query: 65 GAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA 124
G + + L + + +V+ TCP+V+ + V+K+ K Y +I G +H E + +
Sbjct: 78 GVSENILNELEKRELTVVNATCPFVTNIQNKVKKYSKEGYHIVILGDKNHPEVIGINGW- 136
Query: 125 GKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQ 184
CD N + TK+ F+ D+ KV + Q
Sbjct: 137 ---------------CD-------NKAIITKDG-----------TFEEDIPQ-KVCVVAQ 162
Query: 185 TTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLI 244
TT E K E T+ V+ V ++FNTIC AT RQ + K+ +E D +
Sbjct: 163 TT-------EKMKNWENTLKNLNSVKEV----LAFNTICAATDVRQKSTNKISKE-TDAM 210
Query: 245 LVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQ 304
+V+GG NSSNT+ L +IA++ + I++ K + P + I K N + K
Sbjct: 211 IVIGGKNSSNTTKLYQIAKENCQNTIHIENAKEL-PMDFI-----------KNNNIKK-- 256
Query: 305 ITIGITSGASTPDKAVEDVL 324
IG+T+GASTPD + +VL
Sbjct: 257 --IGVTAGASTPDWIIREVL 274
>gi|365860492|ref|ZP_09400298.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Streptomyces
sp. W007]
gi|364010052|gb|EHM30986.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Streptomyces
sp. W007]
Length = 326
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 138/328 (42%), Gaps = 71/328 (21%)
Query: 2 AFIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDV---VNKGDV 58
A IA E + I++ +EI+HN V + LE+ +G DV V +G +
Sbjct: 24 AVIAVEKALEQYGAPIYVRHEIVHNKYVVQTLEK---------KGAIFVDVTAEVPEGSI 74
Query: 59 VVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETV 118
V+ A G A + + +D TCP V+KV ++ K DY ++ G HEE +
Sbjct: 75 VMFSAHGVAPTVHAEAAERKLATIDATCPLVTKVHKEAVRYAKEDYDILLIGHEGHEEVI 134
Query: 119 ATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVK 178
T+ A +I + + E DV VK
Sbjct: 135 GTSGEAPDHITLVDGPE-------------------------------------DVANVK 157
Query: 179 VGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVE 238
V ++ L T + + +E K N+ + IC ATQ RQ A+ K+ E
Sbjct: 158 VRDESKVVWLSQTTLSVDETMETVDAIKAKFPNLLSP--PSDDICYATQNRQIAVKKLAE 215
Query: 239 EKVDLILVVGGWNSSNTSHLQEIAEDRGIP-SYWIDSEKRIGPGNKIAYKLMHGELVEKE 297
+ +L++VVG NSSN+ + E+A D G P ++ +D I E
Sbjct: 216 DA-ELVIVVGSKNSSNSIRMVEVALDAGAPAAHLVDFADEI-----------------DE 257
Query: 298 NWLPKGQITIGITSGASTPDKAVEDVLK 325
WL +G T+G+TSGAS PD V+ VL+
Sbjct: 258 AWL-EGVTTVGLTSGASVPDVLVDGVLE 284
>gi|357038551|ref|ZP_09100348.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Desulfotomaculum gibsoniae DSM 7213]
gi|355359343|gb|EHG07105.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Desulfotomaculum gibsoniae DSM 7213]
Length = 693
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 140/325 (43%), Gaps = 73/325 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
++ +IHN V + L + ++ D +N V++ + G E +
Sbjct: 33 VYTLGPLIHNDQVIEALAREGIGSV------NDLDEINGPGTVIIRSHGVVPEVLRRAEQ 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAG-KYIIVKNMKE 135
K + +VD TCP+V KV +V + D ++ G H E ++G K ++V + +
Sbjct: 87 KGLDLVDATCPFVRKVQRTVRDLVQQDIPVVVVGDPKHPEVEGIVGWSGGKAMVVADADQ 146
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
A+ LEK+ + +G+ QTT + + +
Sbjct: 147 AKK--------------------LEKYHE--------------IGVVAQTTQRQNNFDAV 172
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
K+++ + R +NTIC AT ERQ ++ ++ VD +LV+GG NS+NT
Sbjct: 173 VKVLKDSGSR----------VQVYNTICLATAERQKEAQELAQQ-VDAVLVLGGKNSANT 221
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L +I G P Y +++ + I WL KG T+G+T+GAST
Sbjct: 222 AKLAQICRTAGKPVYRVETAEEIDFA-----------------WL-KGLRTVGVTAGAST 263
Query: 316 PDKAVEDVLKKVF---EIKREEALQ 337
P +E+V ++ E +EE ++
Sbjct: 264 PGWIIEEVSCRMMDFEETNKEEVME 288
>gi|416917653|ref|ZP_11932361.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
sp. TJI49]
gi|325527318|gb|EGD04682.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
sp. TJI49]
Length = 313
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 132/309 (42%), Gaps = 66/309 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V + L + + ++ D V G V + A G A
Sbjct: 33 VYVRHEIVHNRHVVENLRNKGARFV------EELDEVPHGAVAIFSAHGVAQTVERDAQA 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKE 135
+ + ++D TCP V+KV ++ I+ G H E T + ++V++ E
Sbjct: 87 RGLDVLDATCPLVTKVHVQGRQYVAAGRRLILIGHAGHPEVEGTIGQIPAEVVLVQSEAE 146
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
+ L T A++ QTT+ +T I
Sbjct: 147 VDT---------LTLPVDTPVAYV-----------------------TQTTLSVDDTRGI 174
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
+ +++ G + IC ATQ RQ A+ ++ E+VD++LVVG NSSN+
Sbjct: 175 IEALQRRFTDIVGPDT--------RDICYATQNRQAAVREL-SEQVDVLLVVGATNSSNS 225
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L+EI + G+PSY + G+++ K W G T+G+T+GAS
Sbjct: 226 NRLREIGTESGVPSYLVAD------GSEV-----------KAEWF-AGVQTVGLTAGASA 267
Query: 316 PDKAVEDVL 324
P++ VEDV+
Sbjct: 268 PEEMVEDVI 276
>gi|359145583|ref|ZP_09179303.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Streptomyces
sp. S4]
Length = 303
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 138/315 (43%), Gaps = 75/315 (23%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V + LE I VEE + V +G +V+ A G A
Sbjct: 15 IYVRHEIVHNKYVVQTLERKGA--IFVEETAE----VPEGSIVMFSAHGVAPTVHAEAAE 68
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYI-IVKNMKE 135
+ + +D TCP V+KV + + DY ++ G HEE + T+ A +I +V ++
Sbjct: 69 RKLATIDATCPLVTKVHKEAVRFAQDDYDILLIGHEGHEEVIGTSGEAPDHITLVDGPED 128
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
E V E+ S KV +QTT+ ET E
Sbjct: 129 VENV-------EVRDDS-------------------------KVVWLSQTTLSVDETMET 156
Query: 196 GKLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGGW 250
V+ + E F + IC ATQ RQ A+ +M + DL++VVG
Sbjct: 157 -------------VDRLKEKFPQLISPPSDDICYATQNRQIAVKQM-GGQADLVIVVGSK 202
Query: 251 NSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGIT 310
NSSN+ L E+A +G G + A+ + E ++ E WL +G T+G+T
Sbjct: 203 NSSNSVRLVEVA---------------LGAGARDAHLVDFAEEID-EAWL-EGVSTVGVT 245
Query: 311 SGASTPDKAVEDVLK 325
SGAS PD VE VL+
Sbjct: 246 SGASVPDVLVEGVLE 260
>gi|304309978|ref|YP_003809576.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [gamma
proteobacterium HdN1]
gi|301795711|emb|CBL43910.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [gamma
proteobacterium HdN1]
Length = 312
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 137/317 (43%), Gaps = 72/317 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L A + VEE D V G V+ A G +
Sbjct: 35 IYVRHEVVHNRFVVDDLR--ARGAVFVEE----LDQVPDGATVIFSAHGVSKAVQAEAQR 88
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V ++ + ++ G H E T G+Y
Sbjct: 89 RKLKVFDATCPLVTKVHIEVARYAREGRECVLIGHAGHPEVEGTT---GQY--------- 136
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLV------KVGIANQTTMLKG 190
D GG++ +EK DVD V K+ QTT+
Sbjct: 137 ----DRNFGGDIY--------LIEKLD---------DVDTVHPRNPEKLAYITQTTLSVD 175
Query: 191 ETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGW 250
+T I + K + G + IC ATQ RQDA+ + E +++ VVG
Sbjct: 176 DTIAIIAALRKRFPKIIGPRK--------DDICYATQNRQDAVKTLALEN-EVVFVVGSP 226
Query: 251 NSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGIT 310
NSSN++ L+E+AE G +Y +DS +++ ++NW+ +G +G+T
Sbjct: 227 NSSNSNRLRELAERCGARAYLVDSTEQM-----------------QKNWI-EGVSNVGVT 268
Query: 311 SGASTPDKAVEDVLKKV 327
+GAS P++ V V+ ++
Sbjct: 269 AGASAPEELVAQVVAQL 285
>gi|406980773|gb|EKE02335.1| hypothetical protein ACD_20C00399G0020 [uncultured bacterium]
Length = 289
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 140/326 (42%), Gaps = 60/326 (18%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
++ + +++ P ++I ++IHN V + L + +Q I E ++ + + ++
Sbjct: 24 LSVKIKEENPSTPVYILGQLIHNTQVIEHLSSLGIQTI--ETIPEELN-----GICIIRT 76
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF 123
G + + L K QIVD TCP V +V + Y II GK H E +A +
Sbjct: 77 HGVTPQTIQELEQKGCQIVDATCPDVKRVQDKARSLAEEGYKVIIIGKPDHPEVIAIKAH 136
Query: 124 AGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIAN 183
A Y S EA + ++ V K K+GI
Sbjct: 137 ADLY-------------------------SVDEAIVISSEQEVYKYLSIIKKAKKIGIVT 171
Query: 184 QTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 243
QTT ++I ++ E+ E + +NTIC AT +RQ + E V+L
Sbjct: 172 QTTQTHENFKKILPII---------AEHSTELKV-YNTICSATCKRQQEAMTLANE-VEL 220
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
+LVVG +S+NT+HL EI + P K + EL E ++ L K
Sbjct: 221 MLVVGSKSSANTTHLAEI----------------VSPIKKTIHIETEKELDEYKDLLEKA 264
Query: 304 QITIGITSGASTPDKAVEDVLKKVFE 329
IGIT+GASTP +E V++K+ E
Sbjct: 265 N-KIGITAGASTPGYVIEKVIEKIGE 289
>gi|424032074|ref|ZP_17771495.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HENC-01]
gi|424042590|ref|ZP_17780287.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HENC-02]
gi|408876486|gb|EKM15603.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HENC-01]
gi|408888963|gb|EKM27415.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio cholerae
HENC-02]
Length = 317
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 145/327 (44%), Gaps = 73/327 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L++ I VEE V ++V+ A G + +
Sbjct: 33 IYVRHEVVHNRFVVEGLKQRGA--IFVEE----LHEVPDNNIVIFSAHGVSQAVRQEAKS 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++ + D TCP V+KV V + + + ++ G H E T G+Y
Sbjct: 87 RDLTVFDATCPLVTKVHMEVARASRRNMEVVLIGHAGHPEVEGTM---GQY--------- 134
Query: 137 EYVCDYILGGELNGSSSTKEAFL-------EKFKKAVSKGFDPDVDLVKVGIANQTTMLK 189
SS T +L EK K V DP DL V +QTT+
Sbjct: 135 --------------SSDTGGMYLVETPADVEKLKAIVK---DPS-DLHYV---SQTTLSV 173
Query: 190 GETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGG 249
ET ++ + + + G + IC ATQ RQDA+ ++ + VD+++VVG
Sbjct: 174 DETADVIEELRRVFPDIQGPRK--------DDICYATQNRQDAVRELSAD-VDVMVVVGS 224
Query: 250 WNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGI 309
NSSN++ L+E+AE G P Y D + I P W +G+ +G+
Sbjct: 225 KNSSNSTRLKELAEKLGTPGYLTDCPEDIKP-----------------EWF-EGKGKVGV 266
Query: 310 TSGASTPDKAVEDVLKKVFEIKREEAL 336
T+GAS P++ V +L ++ E+ +A+
Sbjct: 267 TAGASAPEELVNQILDRIKELVGAQAV 293
>gi|302542810|ref|ZP_07295152.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Streptomyces
hygroscopicus ATCC 53653]
gi|302460428|gb|EFL23521.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Streptomyces
himastatinicus ATCC 53653]
Length = 339
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 143/326 (43%), Gaps = 67/326 (20%)
Query: 2 AFIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVL 61
A IA E + I++ EI+HN V + LE+ I V+E ++ V +G +V+
Sbjct: 27 AVIAVEKALEQYGAPIYVRKEIVHNKYVVQTLEKKGA--IFVDETEE----VPEGSIVIF 80
Query: 62 PAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATA 121
A G A + + +D TCP V+KV + K DY ++ G HEE + T+
Sbjct: 81 SAHGVAPVVHEEAAQRQLATIDATCPLVTKVHKEAVRFAKEDYDILLIGHEGHEEVIGTS 140
Query: 122 SFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGI 181
A ++ + ++G K + D KV
Sbjct: 141 GEAPDHVTL-----------------VDGPGDVKNVEVR--------------DESKVVW 169
Query: 182 ANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFIS--FNTICDATQERQDAMYKMVEE 239
+QTT+ V++TM +++ IS + IC ATQ RQ A+ K V
Sbjct: 170 LSQTTLS----------VDETMETVDALQDRFPQLISPPSDDICYATQNRQIAI-KQVAA 218
Query: 240 KVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENW 299
+ DL++VVG NSSN+ L E+A IG G K + + + ++ E W
Sbjct: 219 ESDLVIVVGSKNSSNSVRLVEVA---------------IGAGAKDGHLVDYASEID-EAW 262
Query: 300 LPKGQITIGITSGASTPDKAVEDVLK 325
L +G T+G+TSGAS PD VE VL+
Sbjct: 263 L-EGVTTVGVTSGASVPDVLVEGVLE 287
>gi|377813630|ref|YP_005042879.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia sp.
YI23]
gi|357938434|gb|AET91992.1| hydroxymethylbutenyl pyrophosphate reductase [Burkholderia sp.
YI23]
Length = 320
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 130/309 (42%), Gaps = 66/309 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V L + + ++ D V G V + A G A
Sbjct: 33 VYVRHEIVHNRHVVDNLRSKGARFV------EELDEVPHGAVAIFSAHGVARSVEKDAQT 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKE 135
+ + ++D TCP V+KV ++ T I+ G H E T G ++V++
Sbjct: 87 RGLDVLDATCPLVTKVHVQGRQYVAQGRTLILIGHAGHPEVEGTIGQIPGVVVLVQS--- 143
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
EA + K A PD + V QTT+ +T I
Sbjct: 144 --------------------EAEVAKMTLA------PDTPVAYV---TQTTLSVDDTRGI 174
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
+++ G + + IC ATQ RQ A+ ++ ++VD++LVVG NSSN+
Sbjct: 175 IDALQRRFTDIVGPDTRD--------ICYATQNRQAAVREL-SKQVDVLLVVGATNSSNS 225
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L+EI + G+PSY + I P W Q T+G+T+GAS
Sbjct: 226 NRLREIGAESGVPSYLVADGSEIRP-----------------EWFANVQ-TVGLTAGASA 267
Query: 316 PDKAVEDVL 324
P++ V+ V+
Sbjct: 268 PEEMVKHVI 276
>gi|359412969|ref|ZP_09205434.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium sp.
DL-VIII]
gi|357171853|gb|EHJ00028.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium sp.
DL-VIII]
Length = 634
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 140/310 (45%), Gaps = 67/310 (21%)
Query: 15 EKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTL 74
+KI+ +IHN V K LE + +I E+ + + KGDV+V+ + G + + L
Sbjct: 32 KKIYTLGPLIHNNDVVKYLESNNIFSIEFEDIGR----LGKGDVIVIRSHGVSEAIIDAL 87
Query: 75 NNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMK 134
K + +++ TCP+V+ + V+K+ K Y +I G +H E + + I+
Sbjct: 88 EKKELTVINATCPFVANIQKKVKKYSKEGYHIVILGDKNHPEVIGINGWCDDKAII---- 143
Query: 135 EAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEE 194
TK+ E D KV + QTT EE
Sbjct: 144 -------------------TKDGTFE------------DKVPHKVCLVAQTTEKLKNWEE 172
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
+R VNE ++FNTIC AT RQ + K+ +E D ++V+GG NSSN
Sbjct: 173 --------TLRNLSC--VNE-VLAFNTICAATDVRQKSASKISKE-TDAMIVIGGKNSSN 220
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
T+ L +IA++ + I++ K + P N I K N + K IG+T+GAS
Sbjct: 221 TTKLYQIAKENCENTIHIENAKDL-PENLI-----------KNNNIKK----IGVTAGAS 264
Query: 315 TPDKAVEDVL 324
TPD + +VL
Sbjct: 265 TPDWIIREVL 274
>gi|402756214|ref|ZP_10858470.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Acinetobacter
sp. NCTC 7422]
Length = 316
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 138/313 (44%), Gaps = 64/313 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L + + + D V +V+ A G + +
Sbjct: 33 IYVRHEVVHNKFVVDDLRQRGAVFV------DELDQVPDDSIVIFSAHGVSKAVQQEADR 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V K+ + +I+ G H E T G+Y
Sbjct: 87 RGLKVFDATCPLVTKVHIEVTKYAREGTEAILIGHEGHPEVEGTM---GQY--------- 134
Query: 137 EYVCDYILGGE--LNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEE 194
D GGE L EA + K + KV QTT+ ++
Sbjct: 135 ----DKSRGGEIYLVEDEQDVEALMVKHPE-------------KVAFVTQTTL---SIDD 174
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
K+++ + ++ + + IC ATQ RQDA+ + E+ D++LVVG NSSN
Sbjct: 175 TAKVIDALRTKFPLIQGPRK-----DDICYATQNRQDAVRDLAEQ-CDVVLVVGSPNSSN 228
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
++ L+E+AE G +Y +D+ ++ +++W K IG+T+GAS
Sbjct: 229 SNRLRELAERMGKSAYLVDNADQL-----------------EKDWF-KADTKIGVTAGAS 270
Query: 315 TPDKAVEDVLKKV 327
P+ ++ V++++
Sbjct: 271 APEILIKQVIQRL 283
>gi|367469134|ref|ZP_09468901.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Patulibacter
sp. I11]
gi|365815818|gb|EHN10949.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Patulibacter
sp. I11]
Length = 324
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 135/313 (43%), Gaps = 72/313 (23%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ EI+HN V + L+ A I V+E + + +G + + A G +
Sbjct: 38 VYVRKEIVHNKHVVETLK--ARGAIFVDELTGE---IPEGAITIFSAHGVSPAVHADAEQ 92
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ ++ +D TCP V+KV K + + I+ G HEE T A +I
Sbjct: 93 RGLRTIDATCPLVTKVHREAVKFAEDGFHMILIGHAGHEEVEGTMGEAPDHI-------- 144
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
+E + DP + ++ +QTT+ ET EI
Sbjct: 145 --------------------TLVETVEDVDRLEIDPQTE--RLAYISQTTLSVDETREI- 181
Query: 197 KLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGGWN 251
++ + E F + IC AT RQ A+ K + E+ DL+LV+G N
Sbjct: 182 ------------IDRLRERFPHITGPRKDDICYATTNRQMAV-KQLAEQCDLVLVIGSRN 228
Query: 252 SSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITS 311
SSN+ L ++ + G S+ ID+ GE+ +E WL +G+ T+GITS
Sbjct: 229 SSNSLRLVDVTRELGTDSHLIDNA---------------GEV--QEEWL-EGRRTVGITS 270
Query: 312 GASTPDKAVEDVL 324
GAS PD+ VE+++
Sbjct: 271 GASAPDELVEELV 283
>gi|323484700|ref|ZP_08090059.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
symbiosum WAL-14163]
gi|323401937|gb|EGA94276.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium
symbiosum WAL-14163]
Length = 283
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 132/307 (42%), Gaps = 64/307 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I+ IIHN V + LEE V+ + E+ +Q VVV+ + G + L
Sbjct: 33 IYTFGPIIHNEEVVRDLEERGVKVLETEKELRQL----TDGVVVIRSHGVGKDIYDILEK 88
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
++I+D TCP+V K+ V + + II G H E + +V
Sbjct: 89 NGIEIIDATCPFVKKIHRIVSEQNENGRRVIIVGNGKHPEVEGIKGWGNDDTLV------ 142
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
T E F EK + + D K+ I QTT + ++
Sbjct: 143 ---------------IETAEEF-EKLQIS---------DGEKLCIVAQTTFNYNKFQD-- 175
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
LVEK ++ + + NTIC+ATQERQ + + +VD+++V+GG NSSNT
Sbjct: 176 -LVEKISKTRYDI-------LVLNTICNATQERQ-VEARQIASQVDVMIVIGGRNSSNTQ 226
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L EI +Y+I + K P EK + ++GIT+GASTP
Sbjct: 227 KLYEICRRECKETYYIQTLKDFKP--------------EKAGSVR----SVGITAGASTP 268
Query: 317 DKAVEDV 323
++ +E+V
Sbjct: 269 NQIIEEV 275
>gi|262380419|ref|ZP_06073573.1| LytB protein [Acinetobacter radioresistens SH164]
gi|262297865|gb|EEY85780.1| LytB protein [Acinetobacter radioresistens SH164]
Length = 316
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 140/313 (44%), Gaps = 64/313 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L + I V+E D V ++V+ A G + +
Sbjct: 33 IYVRHEVVHNKFVVDDLRQRGA--IFVDE----LDEVPDDNIVIFSAHGVSKSVQLEAER 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V K+ + +I+ G H E T G+Y
Sbjct: 87 RGLKVFDATCPLVTKVHIEVTKYAREGIEAILIGHQGHPEVEGTM---GQY--------- 134
Query: 137 EYVCDYILGGE--LNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEE 194
D GG+ L EA + + +P+ KV QTT+ +T +
Sbjct: 135 ----DKSQGGDIYLVEDEQDVEALIVR---------NPE----KVAFVTQTTLSIDDTAK 177
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
+ + K G + IC ATQ RQDA+ + ++ D++LVVG NSSN
Sbjct: 178 VIDALRKKFPHIQGPRK--------DDICYATQNRQDAVRDL-SKQCDVVLVVGSPNSSN 228
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
++ L+E+AE G +Y +D+ A +L HG W + IG+T+GAS
Sbjct: 229 SNRLRELAERMGKTAYLVDN----------ADQLEHG-------WF-RQTTKIGVTAGAS 270
Query: 315 TPDKAVEDVLKKV 327
P+ ++ V++++
Sbjct: 271 APEILIKQVIQRL 283
>gi|389682318|ref|ZP_10173660.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
chlororaphis O6]
gi|388553761|gb|EIM17012.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
chlororaphis O6]
Length = 309
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 136/317 (42%), Gaps = 70/317 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAA--VEEMVTL 74
+++ +EI+HN V L + VEE D V +V+ A G A VE+
Sbjct: 33 VYVRHEIVHNQHVVDSLRRKGA--LFVEE----LDEVPANALVIFSAHGVARVVEDQA-- 84
Query: 75 NNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-ASFAGKYIIVKNM 133
++++++D TCP VSKV ++ Y I+ G+ H E + T + ++ +
Sbjct: 85 RQRHLRVLDATCPLVSKVHNQGRQYAARGYRLILIGEPGHPEVLGTLGQIPAQVTVLLTV 144
Query: 134 KEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETE 193
+ E L ++ T A++ QTT+ +T
Sbjct: 145 AQVE---------ALEFAADTPLAYI-----------------------TQTTLSVDDTR 172
Query: 194 EIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSS 253
++ + + + G + IC A Q RQ A+ + + VDL+LVVG S+
Sbjct: 173 QVVAALRRRYPQIVGPDT--------RDICYAVQNRQVAV-RALSACVDLVLVVGSQKSA 223
Query: 254 NTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGA 313
N+ L++IA + GIPSY I + + + W + + T+GIT+GA
Sbjct: 224 NSVTLRDIAGESGIPSYLIADGRAL-----------------RREWFDQ-RPTVGITAGA 265
Query: 314 STPDKAVEDVLKKVFEI 330
STP+ ++DVL + I
Sbjct: 266 STPESMIDDVLAALARI 282
>gi|333898943|ref|YP_004472816.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
fulva 12-X]
gi|333114208|gb|AEF20722.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
fulva 12-X]
Length = 314
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 134/318 (42%), Gaps = 70/318 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L + VEE D V +V+ A G + N
Sbjct: 33 IYVRHEVVHNKFVVEDLRNRGA--VFVEE----LDQVPDDVIVIFSAHGVSQAVRNEAAN 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V ++ + I+ G H E T G+Y
Sbjct: 87 RGLKVFDATCPLVTKVHLEVVRYSRDGRECILIGHEGHPEVEGTM---GQY--------- 134
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
D GG + + + + DP+ + QTT+ +T ++
Sbjct: 135 ----DVSNGGAIYLVEDEDDVATLQVR-------DPE----NLAFVTQTTLSMDDTSKV- 178
Query: 197 KLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGGWN 251
++ + F S + IC ATQ RQDA+ ++ E D++LVVG N
Sbjct: 179 ------------IDALRARFPSIGGPRKDDICYATQNRQDAVKQLAAE-CDVLLVVGSPN 225
Query: 252 SSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITS 311
SSN++ L+E+AE G P+Y ID + + K W G IGIT+
Sbjct: 226 SSNSNRLRELAERMGTPAYLIDGAEDL-----------------KREWF-DGAKGIGITA 267
Query: 312 GASTPDKAVEDVLKKVFE 329
GAS P+ V V+ K+ E
Sbjct: 268 GASAPEVLVRGVIDKLGE 285
>gi|260771780|ref|ZP_05880698.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio
metschnikovii CIP 69.14]
gi|260613072|gb|EEX38273.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio
metschnikovii CIP 69.14]
Length = 316
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 137/324 (42%), Gaps = 85/324 (26%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L++ + VEE V +V+ A G +
Sbjct: 33 IYVRHEVVHNRFVVEGLKQRGA--VFVEE----LSEVPDDSIVIFSAHGVSQAVRQEAKA 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ + + D TCP V+KV V + + ++ G H E T G+Y
Sbjct: 87 RALTVFDATCPLVTKVHMEVARASRRHMEVVLIGHAGHPEVEGTM---GQY--------- 134
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGI--------ANQTTML 188
S K +EK + DVD +K + +QTT+
Sbjct: 135 -------------ASQKGKMYLVEKPE---------DVDALKTQVKDPSHLHYVSQTTLS 172
Query: 189 KGETEEIGKLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDL 243
ET ++ +E + E F + IC ATQ RQDA+ +++ E+VD+
Sbjct: 173 VDETADV-------------IEKLREVFPEIQGPRKDDICYATQNRQDAV-RILAEQVDV 218
Query: 244 ILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKG 303
++VVG NSSN++ L+E+AE G PSY ID + I P +W
Sbjct: 219 MVVVGSKNSSNSTRLKELAEKLGTPSYLIDCIEDISP-----------------DWF-ND 260
Query: 304 QITIGITSGASTPDKAVEDVLKKV 327
IG+T+GAS P+ V +L+++
Sbjct: 261 VTMIGVTAGASAPEALVNQILQQI 284
>gi|85058395|ref|YP_454097.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Sodalis
glossinidius str. 'morsitans']
gi|123520106|sp|Q2NVY3.1|ISPH_SODGM RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|84778915|dbj|BAE73692.1| penicillin tolerance protein (lytB) [Sodalis glossinidius str.
'morsitans']
Length = 316
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 139/322 (43%), Gaps = 61/322 (18%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L + I +Q V G +++ A G + +
Sbjct: 33 IYVRHEVVHNRYVVDTLRQRGAIFI------EQITEVPDGSILIFSAHGVSQAVRAEARS 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++ + D TCP V+KV V + + +I+ G H E T G+Y N
Sbjct: 87 RDLTVFDATCPLVTKVHMEVARASRKGTEAILIGHTGHPEVEGTM---GQY---NNPAGG 140
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
Y+ + S ++ + + K + F QTT+ +T ++
Sbjct: 141 MYLVE-----------SPEDVWQLEVKNVDNLCF-----------MTQTTLSVDDTSDVI 178
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+ G + IC AT RQ+A+ + + D++LVVG NSSN++
Sbjct: 179 DALRARFPAIIGPRK--------DDICYATTNRQEAVRSLAADA-DVVLVVGSKNSSNSN 229
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L E+A+ G P+Y IDS I +E+WL +G TIG+T+GAS P
Sbjct: 230 RLSELAQRVGKPAYLIDSAGDI-----------------QESWL-QGTQTIGVTAGASAP 271
Query: 317 DKAVEDVLKKVFEIKREEALQL 338
D V+ V++++ + E A +L
Sbjct: 272 DILVQQVIERLRLLGAEGAKEL 293
>gi|182436265|ref|YP_001823984.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Streptomyces
griseus subsp. griseus NBRC 13350]
gi|238689020|sp|B1W2D7.1|ISPH_STRGG RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|178464781|dbj|BAG19301.1| putative 4-hydroxy-3-methylbut-2-enyl diphosphate [Streptomyces
griseus subsp. griseus NBRC 13350]
Length = 329
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 140/328 (42%), Gaps = 71/328 (21%)
Query: 2 AFIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDV---VNKGDV 58
A IA E + I++ +EI+HN V + LE+ +G DV V +G +
Sbjct: 27 AVIAVEKALEQYGAPIYVRHEIVHNKYVVQTLEK---------KGAIFVDVTAEVPEGSI 77
Query: 59 VVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETV 118
V+ A G A + + +D TCP V+KV ++ K DY ++ G HEE +
Sbjct: 78 VMFSAHGVAPTVHAEAAERKLATIDATCPLVTKVHKEAVRYAKDDYDILLIGHEGHEEVI 137
Query: 119 ATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVK 178
T+ A +I + + E + E+ S K
Sbjct: 138 GTSGEAPDHIQLVDGPED------VANVEVRDES-------------------------K 166
Query: 179 VGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVE 238
V +QTT+ ET E + KF N + IC ATQ RQ A+ K+ E
Sbjct: 167 VVWLSQTTLSVDETME----TVDALKSKFP----NLLSPPSDDICYATQNRQIAVKKLAE 218
Query: 239 EKVDLILVVGGWNSSNTSHLQEIAEDRGIP-SYWIDSEKRIGPGNKIAYKLMHGELVEKE 297
+ +L++VVG NSSN+ + E+A D G P ++ +D I E
Sbjct: 219 D-AELVIVVGSKNSSNSIRMVEVALDAGAPAAHLVDFASEI-----------------DE 260
Query: 298 NWLPKGQITIGITSGASTPDKAVEDVLK 325
WL +G T+G+TSGAS PD V+ VL+
Sbjct: 261 AWL-EGVTTVGLTSGASVPDVLVDGVLE 287
>gi|254508953|ref|ZP_05121060.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio
parahaemolyticus 16]
gi|219548128|gb|EED25146.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vibrio
parahaemolyticus 16]
Length = 321
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 135/311 (43%), Gaps = 59/311 (18%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L++ I VEE V ++V+ A G +
Sbjct: 37 IYVRHEVVHNRFVVEGLKQRGA--IFVEE----LHEVPDDNIVIFSAHGVSQAVRKEAKE 90
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++ + D TCP V+KV V + + ++ G H E T G+Y
Sbjct: 91 RDLTVFDATCPLVTKVHMEVARASRKHMEVVLIGHAGHPEVEGTM---GQY--------- 138
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
+S +L + V D D + +QTT+ ET ++
Sbjct: 139 --------------ASDQGGMYLVETPADVVGLKDKVKDPSNLHYVSQTTLSVDETADVI 184
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+ + + G + IC ATQ RQDA+ +M + VD+++VVG NSSN++
Sbjct: 185 EELRRVFPEIQGPRK--------DDICYATQNRQDAVREMATD-VDVVIVVGSKNSSNST 235
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L+E+AE G P Y D + I P W +G++ +G+T+GAS P
Sbjct: 236 RLKELAEKLGTPGYLTDCPEDIKP-----------------EWF-EGKVKVGVTAGASAP 277
Query: 317 DKAVEDVLKKV 327
++ V +L+++
Sbjct: 278 EELVNQILERI 288
>gi|332671418|ref|YP_004454426.1| hydroxymethylbutenyl pyrophosphate reductase [Cellulomonas fimi
ATCC 484]
gi|332340456|gb|AEE47039.1| hydroxymethylbutenyl pyrophosphate reductase [Cellulomonas fimi
ATCC 484]
Length = 347
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 135/326 (41%), Gaps = 67/326 (20%)
Query: 2 AFIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVL 61
A +A E + +++ EI+HN V + L + + D V +G VV
Sbjct: 32 AVVAVEKALEHYGAPVYVRKEIVHNKYVVETLSARGAVFV------DETDEVPEGARVVF 85
Query: 62 PAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATA 121
A G + +++Q +D TCP V+KV + D+ ++ G HEE T
Sbjct: 86 SAHGVSPAVRAAATARSLQTIDATCPLVTKVHKEAVRFAADDFDILLIGHDGHEEVEGTQ 145
Query: 122 SFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGI 181
A ++I V N +A + G E+ D +V
Sbjct: 146 GEAPEHIQVVNSPDA------VDGVEVR-------------------------DPARVVW 174
Query: 182 ANQTTMLKGET-EEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEK 240
+QTT+ ET E + +L EK + + + IC ATQ RQ A+ K+
Sbjct: 175 ISQTTLSVDETMETVRRLREKFPLLQDP---------PSDDICYATQNRQVAVKKLAPH- 224
Query: 241 VDLILVVGGWNSSNTSHLQEIAEDRGI-PSYWIDSEKRIGPGNKIAYKLMHGELVEKENW 299
D+++ VG NSSN+ L E+A D G SY +D I P W
Sbjct: 225 CDVVITVGSANSSNSVRLVEVALDAGARASYRVDKAAEIDPA-----------------W 267
Query: 300 LPKGQITIGITSGASTPDKAVEDVLK 325
L +G T+G+TSGAS P+ V DVL+
Sbjct: 268 L-EGATTVGVTSGASVPEILVRDVLE 292
>gi|389736761|ref|ZP_10190283.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Rhodanobacter
sp. 115]
gi|388438927|gb|EIL95610.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Rhodanobacter
sp. 115]
Length = 314
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 139/314 (44%), Gaps = 66/314 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V +L + VEE V G V+ A G +
Sbjct: 33 IYVRHEVVHNRYVVDKLRHDGA--VFVEE----LHEVPDGATVIFSAHGVSKAVREEAEQ 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++++ D TCP V+KV V + + + ++ G H E T
Sbjct: 87 RDLKVFDATCPLVTKVHMEVARLGRIGRSVVLIGHAGHPEVEGTM--------------- 131
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKA--VSKGFDPDVDLVKVGIANQTTMLKGETEE 194
G+ N +++ + +E + ++ F + V QTT+ +T
Sbjct: 132 ---------GQWNPANTGEILLVESVEDVAMLTPAFPHQLSYV-----TQTTLSVDDT-- 175
Query: 195 IGKLVEKTMMRKF-GVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSS 253
K + + KF VE + + IC ATQ RQDA+ ++ + VDL+LVVG NSS
Sbjct: 176 --KAIIAALREKFPDVEGPRK-----DDICYATQNRQDAVRRLAD-AVDLMLVVGSVNSS 227
Query: 254 NTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGA 313
N++ L+E+AE +G+ +Y ID + I + WL G IG+T+GA
Sbjct: 228 NSNRLRELAEKQGVRAYLIDGAEHI-----------------ERQWL-DGVQHIGLTAGA 269
Query: 314 STPDKAVEDVLKKV 327
S P+K V DV+ ++
Sbjct: 270 SAPEKLVRDVIARL 283
>gi|348174566|ref|ZP_08881460.1| hydroxymethylbutenyl pyrophosphate reductase [Saccharopolyspora
spinosa NRRL 18395]
Length = 308
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 130/326 (39%), Gaps = 73/326 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +I+HN V LE + + D V G VV A G +
Sbjct: 38 IYVRKQIVHNTHVVADLESRGAVFV------DELDAVPDGATVVFSAHGVSPAVREEAGR 91
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA-GKYIIVKNMKE 135
+ + ++D TCP V+KV + T ++ G HEE T A + ++V+++++
Sbjct: 92 RGLAVIDATCPLVAKVHAEARRFAGRGDTLVLIGHSGHEEVEGTLGEAPDQTVLVESVED 151
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
GE+ + ++L QTT+ ET +I
Sbjct: 152 V---------GEIEVPDPKQVSYL-----------------------TQTTLAVDETADI 179
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
+ R+F S IC A+ RQDA+ + E DL+LV+G NSSN+
Sbjct: 180 ----VAALRRRFPAVRGP----SSKDICYASTNRQDALSAIAGE-CDLVLVIGSANSSNS 230
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
L E+A +G ++ ID I P WL G TIG+T+GAS
Sbjct: 231 KRLVELARRQGTAAHLIDDVTDIQPA-----------------WL-TGAETIGLTAGASA 272
Query: 316 PDKAVEDVLKKV-------FEIKREE 334
P VEDV+ + E REE
Sbjct: 273 PPGLVEDVIDHLEPATVIEHETTREE 298
>gi|256825839|ref|YP_003149799.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Kytococcus
sedentarius DSM 20547]
gi|256689232|gb|ACV07034.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Kytococcus
sedentarius DSM 20547]
Length = 339
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 135/314 (42%), Gaps = 75/314 (23%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ EI+HN V L + VEE D V +G V+ A G A
Sbjct: 42 VYVRKEIVHNKHVVDTLRRRGA--VFVEE----TDEVPEGATVIFSAHGVAPIVHEEAKA 95
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
++++ +D TCP V+KV + DY ++ G HEE V TA A +++I+
Sbjct: 96 RSLKSIDATCPLVTKVHREAVRFADDDYDILLIGHEGHEEVVGTAGEAPEHVIL------ 149
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
++G K+ + DP+ KV +QTT+ ET E
Sbjct: 150 -----------VDGPEGVKDVEVR----------DPE----KVVWLSQTTLSVDETMETV 184
Query: 197 KLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGGWN 251
+L + E F S + IC ATQ RQ A+ +M E +DL+LVVG N
Sbjct: 185 RL-------------LREKFPSLQDPPSDDICYATQNRQLAVKQMAPE-LDLMLVVGSRN 230
Query: 252 SSNTSHLQEIAEDRGI-PSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGIT 310
SSN+ L E+A + G Y +D + ++ W +G T+G++
Sbjct: 231 SSNSVRLVEVALEHGARDGYLVDYAAEL-----------------QDEWF-EGVETVGVS 272
Query: 311 SGASTPDKAVEDVL 324
SGAS P+ V DVL
Sbjct: 273 SGASVPEILVRDVL 286
>gi|78043962|ref|YP_360744.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Carboxydothermus hydrogenoformans Z-2901]
gi|77996077|gb|ABB14976.1| hydroxymethylbutenyl pyrophosphate reductase/ribosomal protein S1
[Carboxydothermus hydrogenoformans Z-2901]
Length = 653
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 133/312 (42%), Gaps = 71/312 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
++ +IHNP +RL++ + + G +++ + G E++ + +
Sbjct: 32 VYSLGPLIHNPQEVERLKKAGIIP-------IEEIEEGNGKTIIIRSHGTTPEKLQEIVD 84
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAG-KYIIVKNMKE 135
+ + D TCP+V K +K Y ++ G H E ++G K ++V+N +E
Sbjct: 85 RGYVVEDATCPFVKKAQILAQKLTDEGYQVVVVGDKKHPEVQGIVGWSGYKALVVENPEE 144
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
A + Y K+ + QTT ++E
Sbjct: 145 AARLPFY----------------------------------PKIAVIAQTTQ---KSENF 167
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
++VE +++K G E FNTIC AT+ RQ+ K+ E V+++LVVGG NS+NT
Sbjct: 168 WQVVE--VIKKKGGE-----VRPFNTICHATRTRQEESRKLATE-VEVMLVVGGKNSANT 219
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
L +I P+Y I+ I P W G+ +GIT+GAST
Sbjct: 220 KKLAQICAATNTPTYLIEEASEIKP-----------------EWFA-GKAKVGITAGAST 261
Query: 316 PDKAVEDVLKKV 327
P +E+V KKV
Sbjct: 262 PAWIIEEVRKKV 273
>gi|398992543|ref|ZP_10695508.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pseudomonas sp. GM21]
gi|398136844|gb|EJM25922.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pseudomonas sp. GM21]
Length = 315
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 138/312 (44%), Gaps = 62/312 (19%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L A I VEE D V +V+ A G + +
Sbjct: 33 IYVRHEVVHNKFVVEDLR--ARGAIFVEE----LDQVPDDVIVIFSAHGVSQAVRTEAAS 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V ++ + I+ G H E T
Sbjct: 87 RGLKVFDATCPLVTKVHIEVARYSRDGRECILIGHAGHPEVEGTM--------------- 131
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKK-AVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
G+ +GS+ +E K + +P+ K+ QTT+ +T
Sbjct: 132 ---------GQYDGSNGGAIYLVEDEKDVGALQVHNPE----KLAFVTQTTLSMDDTS-- 176
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
++++ R + + + IC ATQ RQDA+ ++ +E D++LVVG NSSN+
Sbjct: 177 -RVIDALRARFPAIGGPRK-----DDICYATQNRQDAVKQLADE-CDVVLVVGSPNSSNS 229
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L+E+AE P+Y ID + + +++W G IGIT+GAS
Sbjct: 230 NRLRELAERMATPAYLIDGAEDL-----------------QKSWF-DGVERIGITAGASA 271
Query: 316 PDKAVEDVLKKV 327
P+ V V++++
Sbjct: 272 PEVLVRGVIQQL 283
>gi|312115721|ref|YP_004013317.1| hydroxymethylbutenyl pyrophosphate reductase [Rhodomicrobium
vannielii ATCC 17100]
gi|311220850|gb|ADP72218.1| hydroxymethylbutenyl pyrophosphate reductase [Rhodomicrobium
vannielii ATCC 17100]
Length = 318
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 135/318 (42%), Gaps = 66/318 (20%)
Query: 14 EEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVT 73
+ +++ +EI+HN V L+ + + + D + +G V + A G A + ++
Sbjct: 40 DAPVFVRHEIVHNKHVVDDLKAKGARFV------DEIDEIPEGAVTIFSAHGVAKDVEIS 93
Query: 74 LNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-ASFAGKYIIVKN 132
+ + ++D TCP V+KV +++ T I+ G H E T G +V+
Sbjct: 94 AEERGLPVIDATCPLVTKVHLQGKRYLGQGRTLILVGHAGHPEVEGTMGQIPGTVYLVQT 153
Query: 133 MKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGET 192
+ L S T A++ QTT+ +T
Sbjct: 154 EDDV---------AALPVSRDTPVAYI-----------------------TQTTLSIDDT 181
Query: 193 EEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNS 252
I ++ G N IC ATQ RQ A+ ++ + D+ILVVG NS
Sbjct: 182 RGIILAIKDRFKDVIGP--------GTNDICYATQNRQMAVREL-SKIADVILVVGAKNS 232
Query: 253 SNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSG 312
SN++ L+EI E+ G+PSY + + P +W+ QI +G+T+G
Sbjct: 233 SNSNRLREIGEEAGVPSYLLADGSELKP-----------------DWVRGAQI-VGLTAG 274
Query: 313 ASTPDKAVEDVLKKVFEI 330
AS P+ V+DV++ + ++
Sbjct: 275 ASAPEGMVQDVIEALRKL 292
>gi|225874868|ref|YP_002756327.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Acidobacterium
capsulatum ATCC 51196]
gi|225792401|gb|ACO32491.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Acidobacterium
capsulatum ATCC 51196]
Length = 338
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 138/309 (44%), Gaps = 64/309 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ EI+HN V L E I VE+ D V +G V+ A G + +
Sbjct: 52 IYVRKEIVHNRFVVNELAEKGA--IFVED----IDQVPEGSRVIYSAHGVSPAVRQQSKD 105
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+N++++D TCP V+KV K + Y+ ++ G HEE T + EA
Sbjct: 106 RNLRVIDATCPLVTKVHVEAVKFARQGYSLVLIGHRDHEEIEGT------------LGEA 153
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
V + SS+ + A LE PD + +V QTT+ E ++
Sbjct: 154 PDVTTVV-------SSAAEVAALEV----------PDPN--RVAYLTQTTLSLDEARDMI 194
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+ ++K G + IC AT+ RQ A+ K V + DL+LVVG NSSN++
Sbjct: 195 EALKKKFPNIVGPHS--------QDICYATENRQVAV-KNVAHQADLVLVVGSNNSSNSN 245
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L E++ + G Y ID+ K I P WL +G T+ +T+GAS P
Sbjct: 246 RLVEVSRNLGTKGYLIDNSKAIRP-----------------EWL-EGVATVAVTAGASAP 287
Query: 317 DKAVEDVLK 325
+ VEDV+K
Sbjct: 288 EVLVEDVVK 296
>gi|453053559|gb|EMF01022.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Streptomyces
mobaraensis NBRC 13819 = DSM 40847]
Length = 313
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 144/311 (46%), Gaps = 67/311 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V K LE+ I V+E F+V +G++V+ A G A
Sbjct: 15 VYVRHEIVHNKYVVKTLEKKGA--IFVDE---TFEV-PEGNIVIFSAHGVAPVVHEEAAR 68
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +D TCP V+KV ++ + DY ++ G HEE + T+ A +I +
Sbjct: 69 GKLATIDATCPLVTKVHKEAVRYAREDYDILLIGHEGHEEVIGTSGEAPDHIQL------ 122
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
++G + +PD KV +QTT+
Sbjct: 123 -----------VDGPEDVANVEVR----------NPD----KVVWLSQTTLS-------- 149
Query: 197 KLVEKTMMRKFGVENVNEHFIS--FNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
V++TM ++N + +S + IC ATQ RQ A+ KM E DL++VVG NSSN
Sbjct: 150 --VDETMETVGALKNKFPNLLSPPSDDICYATQNRQTAVKKMGAE-ADLVIVVGSKNSSN 206
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
+ L E+A +G G + A+ + + E ++ E WL +G T+G+TSGAS
Sbjct: 207 SVRLVEVA---------------LGAGARAAHLVDYAEEID-EAWL-EGVSTVGVTSGAS 249
Query: 315 TPDKAVEDVLK 325
P+ VE VL+
Sbjct: 250 VPEILVEGVLE 260
>gi|119897493|ref|YP_932706.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Azoarcus sp.
BH72]
gi|166217145|sp|A1K4R4.1|ISPH_AZOSB RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|119669906|emb|CAL93819.1| probable 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Azoarcus sp. BH72]
Length = 312
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 137/311 (44%), Gaps = 64/311 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L A + VEE D V G+ V+ A G + +
Sbjct: 36 IYVRHEVVHNKFVVDDLR--AKGAVFVEE----LDEVPTGNTVIFSAHGVSQAVREEADK 89
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V + ++ ++ G H E T + +K+
Sbjct: 90 RGLRVFDATCPLVTKVHIEVGRMREQGRELVMIGHKGHPEVEGT---------MGQVKDG 140
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
++ + A + + A DPD K+ QTT+ + I
Sbjct: 141 IHLVE-------------TAADVANLQVA-----DPD----KLAYVTQTTLSVDDAAAIV 178
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+ + G + + IC ATQ RQDA+ K + D++ VVG NSSN++
Sbjct: 179 TALRERFPNIMGPKK--------DDICYATQNRQDAV-KFMTPHADVVFVVGSKNSSNSN 229
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L+E+AE RG+P+Y +D+ I P W+ G+ IG+T+GAS P
Sbjct: 230 RLREVAELRGVPAYLVDNAAGIDPA-----------------WI-VGKRRIGVTAGASAP 271
Query: 317 DKAVEDVLKKV 327
+ V +V++++
Sbjct: 272 EVLVAEVIERL 282
>gi|414163145|ref|ZP_11419392.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1 [Afipia felis
ATCC 53690]
gi|410880925|gb|EKS28765.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1 [Afipia felis
ATCC 53690]
Length = 325
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 137/320 (42%), Gaps = 76/320 (23%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V + L+ A + VE+ + V + V A G A +
Sbjct: 44 VYVRHEIVHNKYVVESLK--AKGAVFVEDVHE----VPDNAITVFSAHGVAKSVEAEAAS 97
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKE 135
+N+ ++D TCP VSKV +++ ++ G H E V T G +V+++++
Sbjct: 98 RNLPVLDATCPLVSKVHNQGKRYVGKGRRLVLIGHEGHPEVVGTMGQVPGPVTLVQSVED 157
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
+L+ S A++ QTT+ +T +I
Sbjct: 158 V---------AQLDIPSDAPVAYI-----------------------TQTTLSVDDTRDI 185
Query: 196 GKLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGGW 250
+ + E F IC ATQ RQ ++ + + VDLILVVG
Sbjct: 186 -------------IAALAERFPDLEGPDTRDICYATQNRQSSVRDL-SKLVDLILVVGAT 231
Query: 251 NSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGIT 310
NSSN++ L+EI + G+PSY I ++ P WL +G T+GIT
Sbjct: 232 NSSNSNRLREIGTEVGVPSYLIADGSQLNP-----------------EWL-RGVKTVGIT 273
Query: 311 SGASTPDKAVEDVLKKVFEI 330
+GAS P+ V+DV+ + I
Sbjct: 274 AGASAPEVLVDDVINALRRI 293
>gi|429212818|ref|ZP_19203983.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas sp.
M1]
gi|428157300|gb|EKX03848.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas sp.
M1]
Length = 314
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 133/311 (42%), Gaps = 60/311 (19%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L + VEE D V +V+ A G + N
Sbjct: 33 IYVRHEVVHNKFVVENLRNRGA--VFVEE----LDQVPDDTIVIFSAHGVSQAVRKEAEN 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V ++ + I+ G H E T G+Y
Sbjct: 87 RGLKVFDATCPLVTKVHMEVVRYSRDGQECILIGHEGHPEVEGTM---GQY--------- 134
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
+ GG++ ++ + + + F QTT+ +T ++
Sbjct: 135 ----NRDNGGDIYLVEDEEDVAALQVRNPEALHF-----------VTQTTLSMDDTSKVI 179
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+ G N IC ATQ RQDA+ K + ++ DL+LVVG NSSN++
Sbjct: 180 DALRAKFPYIKGPRK--------NDICYATQNRQDAV-KDLADQCDLVLVVGSPNSSNSN 230
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L+E+AE G P Y ID + + K W +G+ IGIT+GAS P
Sbjct: 231 RLRELAERMGTPGYLIDGAEDL-----------------KREWF-EGKRLIGITAGASAP 272
Query: 317 DKAVEDVLKKV 327
+ V V++++
Sbjct: 273 EVLVRGVIEQL 283
>gi|104783643|ref|YP_610141.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
entomophila L48]
gi|122401810|sp|Q1I4S8.1|ISPH_PSEE4 RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|95112630|emb|CAK17358.1| hydroxymethylbutenyl pyrophosphate reductase [Pseudomonas
entomophila L48]
Length = 315
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 134/316 (42%), Gaps = 70/316 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L + VEE D V +V+ A G +
Sbjct: 33 IYVRHEVVHNKFVVEDLRNRGA--VFVEE----LDQVPDDVIVIFSAHGVSQAVRQEAAG 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V K+ + I+ G H E T G+Y
Sbjct: 87 RGLKVFDATCPLVTKVHIEVAKYSRDGRECILIGHAGHPEVEGTM---GQY--------- 134
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
D GG + K+ + + +PD + QTT+ +T +
Sbjct: 135 ----DASNGGSIYLVEDEKDVAALQVR-------NPD----HLAFVTQTTLSMDDTSRV- 178
Query: 197 KLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGGWN 251
++ + E F + + IC ATQ RQDA+ ++ +E D++LVVG N
Sbjct: 179 ------------IDALRERFPNIGGPRKDDICYATQNRQDAVKQLADE-CDVVLVVGSPN 225
Query: 252 SSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITS 311
SSN++ L+E+AE P+Y ID + + + +W Q IGIT+
Sbjct: 226 SSNSNRLRELAERMSTPAYLIDGAEDL-----------------QRSWFDGAQ-RIGITA 267
Query: 312 GASTPDKAVEDVLKKV 327
GAS P+ V V+ ++
Sbjct: 268 GASAPEVLVRGVIDQL 283
>gi|326404220|ref|YP_004284302.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Acidiphilium
multivorum AIU301]
gi|325051082|dbj|BAJ81420.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Acidiphilium
multivorum AIU301]
Length = 321
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 132/314 (42%), Gaps = 69/314 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +EI+HN V + L + + V G + V A G A + + N
Sbjct: 46 IYVRHEIVHNRHVVEDLRSRGAVFV------DEISEVPDGAITVFSAHGVARKVQQSAAN 99
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ + + D TCP V+KV + ++ ++ G H E T
Sbjct: 100 RALPVTDATCPLVAKVHSEGRRYAGQGREIVLIGHAGHAEVEGTI--------------- 144
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI- 195
G+++G + + VS DPD K+ QTT+ +T I
Sbjct: 145 ---------GQIDGRVYLVQTVEDVASLQVS---DPD----KLAYITQTTLSVDDTRGII 188
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
LVE R G+ + IC ATQ RQ+A+ + + E+VD+ILVVG NSSN+
Sbjct: 189 AALVE----RFPGIVGPD-----VRDICYATQNRQEAV-RHLAEQVDVILVVGSRNSSNS 238
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L EI + G PSY ID + P +W KG +G+T+GAS
Sbjct: 239 NRLCEIGAELGRPSYLIDDASHLDP-----------------SWF-KGIRAVGVTAGASA 280
Query: 316 PD---KAVEDVLKK 326
P+ K V D L+K
Sbjct: 281 PEVLVKGVIDGLRK 294
>gi|420369394|ref|ZP_14870112.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Shigella
flexneri 1235-66]
gi|391321347|gb|EIQ78077.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Shigella
flexneri 1235-66]
Length = 316
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 141/325 (43%), Gaps = 67/325 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L E I +Q V G +++ A G +
Sbjct: 33 IYVRHEVVHNRYVVDSLRERGAIFI------EQISEVPDGAILIFSAHGVSQAVRNEAKG 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++ + D TCP V+KV V + + SI+ G H E T G+Y N +
Sbjct: 87 RDLTVFDATCPLVTKVHMEVARASRRGEESILIGHAGHPEVEGTM---GQY---SNPQGG 140
Query: 137 EYVCDY---ILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETE 193
Y+ + +L +LN + K +F+ QTT+ +T
Sbjct: 141 MYLVESPEDVL--KLNVKNEGKLSFM-----------------------TQTTLSVDDTS 175
Query: 194 EIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSS 253
++ + + + G + IC AT RQ+A+ + + E+ D++LVVG NSS
Sbjct: 176 DVIDALRQRFPKIVGPRK--------DDICYATTNRQEAV-RALAEQADVVLVVGSKNSS 226
Query: 254 NTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGA 313
N++ L E+A+ G +Y ID I +E W+ K +G+T+GA
Sbjct: 227 NSNRLAELAQRMGKAAYLIDDATDI-----------------QEAWV-KAAKCVGVTAGA 268
Query: 314 STPDKAVEDVLKKVFEIKREEALQL 338
S PD V++V+ ++ E+ EA+ L
Sbjct: 269 SAPDILVQNVIARLQELGGGEAIPL 293
>gi|88811399|ref|ZP_01126654.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nitrococcus
mobilis Nb-231]
gi|88791288|gb|EAR22400.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nitrococcus
mobilis Nb-231]
Length = 306
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 132/318 (41%), Gaps = 78/318 (24%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNI-PVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLN 75
+++ +EI+HN V + L E + VEE Q V++ A G A
Sbjct: 33 VYVLHEIVHNQHVVRDLSERGAIFVESVEEVPAQ-------SVIIFSAHGVANAVAQRAR 85
Query: 76 NKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKE 135
+ ++++D TCP V+KV ++++ II G H E T
Sbjct: 86 GRGLRVIDATCPLVTKVHRQAQRYRDAGRELIIIGHGGHPEVQGTR-------------- 131
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKV------GIANQTTMLK 189
G ++G A LE DVD ++V QTT+
Sbjct: 132 ----------GRVDGPVHVI-ATLE------------DVDALQVQDPQALAYVTQTTLSL 168
Query: 190 GETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGG 249
+T E+ ++ + G N IC ATQ RQ+A+ ++ + VD++LVVG
Sbjct: 169 DDTHEVVTALKARFPKIQGP--------GLNDICYATQNRQNAVRELTAQ-VDVLLVVGA 219
Query: 250 WNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGI 309
NSSN++ L+E+ E G+ SY + +E + P W +GI
Sbjct: 220 RNSSNSNRLREVGEQMGVRSYLVQTEDDLEP-----------------EWF-SACTRVGI 261
Query: 310 TSGASTPDKAVEDVLKKV 327
T+GAS P+ V+ VL+++
Sbjct: 262 TAGASAPEVLVQRVLERL 279
>gi|345872225|ref|ZP_08824163.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Thiorhodococcus
drewsii AZ1]
gi|343919306|gb|EGV30056.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Thiorhodococcus
drewsii AZ1]
Length = 315
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 134/308 (43%), Gaps = 63/308 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L + I + D V G +V A G
Sbjct: 33 IYVRHEVVHNRFVVEGLRQRGAIFI------EDLDEVPDGATLVFSAHGVPQAVRQAAQA 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V ++ + + I+ G H E T
Sbjct: 87 RELKLFDATCPLVTKVHLEVARYCQNGISVILIGHRGHPEVEGTL--------------- 131
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKK-AVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
G+ G S T + +E K A K DP+ +V QTT+ ++ +I
Sbjct: 132 ---------GQCTGDSGTIQ-LVEGVKDIADLKIPDPE----RVAYVTQTTLSMDDSRDI 177
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
++ R ++ + + IC ATQ RQDA+ + + + DL+LVVG NSSN+
Sbjct: 178 ---IDALRARFPAIQGPKK-----SDICYATQNRQDAVRDLAK-RCDLLLVVGSPNSSNS 228
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L+E+AE +G +Y ID GP E + +E WL IG+T+GAS
Sbjct: 229 NRLRELAEKQGCSAYLID-----GP-----------EDISRE-WL-NASSRIGVTAGASA 270
Query: 316 PDKAVEDV 323
P VE V
Sbjct: 271 PAILVERV 278
>gi|119505898|ref|ZP_01627962.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [marine gamma
proteobacterium HTCC2080]
gi|119458279|gb|EAW39390.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [marine gamma
proteobacterium HTCC2080]
Length = 316
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 141/315 (44%), Gaps = 64/315 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L + VEE D + +V+ A G +
Sbjct: 33 IYVRHEVVHNRFVVDDLRSRGA--VFVEE----LDEIPDDAIVIFSAHGVSKAVQEGARQ 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V ++ G H E T G+Y
Sbjct: 87 RGLRVFDATCPLVTKVHVEVAAFSDNGRECVLIGHGGHPEVEGT---MGQY--------- 134
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGF--DPDVDLVKVGIANQTTMLKGETEE 194
+SS + +L + ++ V+ DP+ + QTT+ ++
Sbjct: 135 -------------DTSSGGQIYLIEDEEQVAHLMVKDPE----NLAYVTQTTL---SVDD 174
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
++++ R +E + + IC ATQ RQDA+ K + EKV+++LVVG NSSN
Sbjct: 175 TARVIDALRDRFPAIEGPRK-----DDICYATQNRQDAV-KSLAEKVEVVLVVGSTNSSN 228
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
++ L+E+AE G SY ID+ ++I GE WL KG +G+T+GAS
Sbjct: 229 SNRLRELAERCGAKSYLIDNAEQIS-----------GE------WL-KGVTGVGVTAGAS 270
Query: 315 TPDKAVEDVLKKVFE 329
P+ V +V+ ++ E
Sbjct: 271 APEVLVAEVIDRLQE 285
>gi|336426344|ref|ZP_08606354.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Lachnospiraceae
bacterium 3_1_57FAA_CT1]
gi|336010779|gb|EGN40759.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Lachnospiraceae
bacterium 3_1_57FAA_CT1]
Length = 282
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 132/308 (42%), Gaps = 64/308 (20%)
Query: 16 KIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLN 75
KI+ IIHN V + LE+ VQ I EE + D + +G VV+ + G +
Sbjct: 31 KIYTYGPIIHNEFVVQDLEKKGVQVIESEE---ELDKLTEGTVVI-RSHGVPKSICEKIE 86
Query: 76 NKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKE 135
+ ++ VD TCP+V ++ VEK +I G H E
Sbjct: 87 KQGLECVDATCPFVKRIHKIVEKESAAGCRIVIIGNAGHPEVEG---------------- 130
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
+ G S T A +E K+A +P L I +QTT + +E
Sbjct: 131 ------------IQGWSLTPAAVVESEKEAREFVAEPGKKLC---IVSQTTFNYNKFQE- 174
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
LVE + + + + VN TIC+AT+ERQ K + KVD ++V+GG +SSNT
Sbjct: 175 --LVEIFLKKGYDISVVN-------TICNATEERQTEA-KDIAAKVDAMIVIGGKHSSNT 224
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
L EI + A+ + L + LPK +GIT+GAST
Sbjct: 225 RKLYEIC------------------CRECAHTCLIQTLDDLHLELPKAVRLVGITAGAST 266
Query: 316 PDKAVEDV 323
P+K +E+V
Sbjct: 267 PNKLIEEV 274
>gi|296329347|ref|ZP_06871848.1| bifunctional penicillin tolerance protein LytB/ ribosomal protein
S1 RpsA [Fusobacterium nucleatum subsp. nucleatum ATCC
23726]
gi|296153703|gb|EFG94520.1| bifunctional penicillin tolerance protein LytB/ ribosomal protein
S1 RpsA [Fusobacterium nucleatum subsp. nucleatum ATCC
23726]
Length = 827
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 141/310 (45%), Gaps = 61/310 (19%)
Query: 18 WITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNK 77
+I ++HN V + +E + + +E D + + D+VV+ A G + L +
Sbjct: 33 YILGMLVHNKQVVEDMERKGFKLVTEDELLNDMDELKEDDIVVIRAHGTSKSVHEKLKER 92
Query: 78 NVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAE 137
V++ D TC +V+K+ +E + Y+ + G +H E SFA I ++ +EA
Sbjct: 93 KVKVFDATCIFVNKIRQEIEIANENGYSILFMGDKNHPEVKGVISFADDIQIFESFEEA- 151
Query: 138 YVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGK 197
K D+D + ++ QTT+ K + EEI
Sbjct: 152 ------------------------------KKLKIDLDKTYL-LSTQTTLNKKKFEEI-- 178
Query: 198 LVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSH 257
+K+ EN ++ + F+ IC AT RQ A+ + KV+++++VG SSNT
Sbjct: 179 -------KKYFKENY-KNVVIFDKICGATAVRQKAVEDLAV-KVEVMIIVGDTKSSNTKK 229
Query: 258 LQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPD 317
L EI++ SY +++E+++ + +G+ +GIT+GASTP+
Sbjct: 230 LYEISKKLNDNSYLVENEEQLDLS------------------IFRGKEVVGITAGASTPE 271
Query: 318 KAVEDVLKKV 327
+ + ++ KKV
Sbjct: 272 ETIMNIEKKV 281
>gi|255320203|ref|ZP_05361388.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Acinetobacter
radioresistens SK82]
gi|421466521|ref|ZP_15915200.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Acinetobacter
radioresistens WC-A-157]
gi|421855248|ref|ZP_16287628.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Acinetobacter
radioresistens DSM 6976 = NBRC 102413]
gi|255302642|gb|EET81874.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Acinetobacter
radioresistens SK82]
gi|400203301|gb|EJO34294.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Acinetobacter
radioresistens WC-A-157]
gi|403189259|dbj|GAB73829.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Acinetobacter
radioresistens DSM 6976 = NBRC 102413]
Length = 316
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 140/313 (44%), Gaps = 64/313 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L + I V+E D V ++V+ A G + +
Sbjct: 33 IYVRHEVVHNKFVVDDLRQRGA--IFVDE----LDEVPDDNIVIFSAHGVSKAVQLEAER 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V K+ + +I+ G H E T G+Y
Sbjct: 87 RGLKVFDATCPLVTKVHIEVTKYAREGIEAILIGHQGHPEVEGTM---GQY--------- 134
Query: 137 EYVCDYILGGE--LNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEE 194
D GG+ L EA + + +P+ KV QTT+ +T +
Sbjct: 135 ----DKSQGGDIYLVEDEQDVEALIVR---------NPE----KVAFVTQTTLSIDDTAK 177
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
+ + K G + IC ATQ RQDA+ + ++ D++LVVG NSSN
Sbjct: 178 VIDALRKKFPHIQGPRK--------DDICYATQNRQDAVRDL-SKQCDVVLVVGSPNSSN 228
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
++ L+E+AE G +Y +D+ A +L HG W + IG+T+GAS
Sbjct: 229 SNRLRELAERMGKTAYLVDN----------ADQLEHG-------WF-RQTTKIGVTAGAS 270
Query: 315 TPDKAVEDVLKKV 327
P+ ++ V++++
Sbjct: 271 APEILIKQVIQRL 283
>gi|50122794|ref|YP_051961.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pectobacterium
atrosepticum SCRI1043]
gi|71152182|sp|Q6D0C6.1|ISPH_ERWCT RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|49613320|emb|CAG76771.1| IspH protein (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
reductase) [Pectobacterium atrosepticum SCRI1043]
Length = 316
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 140/322 (43%), Gaps = 61/322 (18%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L E I +Q + V G +++ A G + N
Sbjct: 33 IYVRHEVVHNRYVVNGLRERGAIFI------EQIEDVPDGAILIFSAHGVSQAVRNEAKN 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+++ + D TCP V+KV V + K +I+ G H E T G+Y N
Sbjct: 87 RDLTVFDATCPLVTKVHMEVARASKKGVEAILIGHAGHPEVEGTM---GQY---SNADGG 140
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
Y+ + S + + + K + F QTT+ +T +
Sbjct: 141 MYLVE-----------SPDDVWQLQVKDEKNLCF-----------MTQTTLSVDDTYAVI 178
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+ + R G + IC AT RQ+A+ + + +K D++ VVG NSSN++
Sbjct: 179 DALRERFPRIIGPRK--------DDICYATTNRQEAV-RHLSDKADVVFVVGSKNSSNSN 229
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L E+A+ G +Y IDS I +E+WL G +G+T+GAS P
Sbjct: 230 RLAELAQRAGKAAYLIDSADDI-----------------QESWL-TGASYVGVTAGASAP 271
Query: 317 DKAVEDVLKKVFEIKREEALQL 338
D V+ V++++ E+ + A+++
Sbjct: 272 DILVQQVIQRLKELGGKVAVEM 293
>gi|19705086|ref|NP_602581.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding
domain protein [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|50401078|sp|Q8RI52.1|ISPH_FUSNN RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|19713008|gb|AAL93880.1| LytB protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
Length = 827
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 141/310 (45%), Gaps = 61/310 (19%)
Query: 18 WITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNK 77
+I ++HN V + +E + + +E D + + D+VV+ A G + L +
Sbjct: 33 YILGMLVHNKQVVEDMERKGFKLVTEDELLNDMDELKEDDIVVIRAHGTSKSVHEKLKER 92
Query: 78 NVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAE 137
V++ D TC +V+K+ +E + Y+ + G +H E SFA I ++ +EA
Sbjct: 93 KVKVFDATCIFVNKIRQEIEIANENGYSILFMGDKNHPEVKGVISFADDIQIFESFEEA- 151
Query: 138 YVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGK 197
K D+D + ++ QTT+ K + EEI
Sbjct: 152 ------------------------------KKLKIDLDKTYL-LSTQTTLNKKKFEEI-- 178
Query: 198 LVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSH 257
+K+ EN ++ + F+ IC AT RQ A+ + KV+++++VG SSNT
Sbjct: 179 -------KKYFKENY-KNVVIFDKICGATAVRQKAVEDLAV-KVEVMIIVGDTKSSNTKK 229
Query: 258 LQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPD 317
L EI++ SY +++E+++ + +G+ +GIT+GASTP+
Sbjct: 230 LYEISKKLNDNSYLVENEEQLDLS------------------IFRGKEVVGITAGASTPE 271
Query: 318 KAVEDVLKKV 327
+ + ++ KKV
Sbjct: 272 ETIMNIEKKV 281
>gi|429334376|ref|ZP_19215042.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
putida CSV86]
gi|428760953|gb|EKX83201.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
putida CSV86]
Length = 315
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 140/320 (43%), Gaps = 74/320 (23%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L A I VEE D V +V+ A G +
Sbjct: 33 IYVRHEVVHNKFVVEDLR--ARGAIFVEE----LDQVPDDVIVIFSAHGVSQAVRQEAAG 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V ++ + I+ G H E T G+Y
Sbjct: 87 RGLKVFDATCPLVTKVHIEVARYSRDGKECILIGHAGHPEVEGTM---GQY--------- 134
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSK--GFDPDVDLVKVGIANQTTMLKGETEE 194
+ NG S +L + + V++ +PD ++ QTT+ +T
Sbjct: 135 ---------DDSNGGS----IYLVEDEDDVARLEVRNPD----RLAFVTQTTLSMDDTSR 177
Query: 195 IGKLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGG 249
+ ++ + F S + IC ATQ RQDA+ ++ +E D++LVVG
Sbjct: 178 V-------------IDALRTRFPSIGGPRKDDICYATQNRQDAVKQLADE-CDVVLVVGS 223
Query: 250 WNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGI 309
NSSN++ L+E+AE P+Y ID + + + NW G +GI
Sbjct: 224 PNSSNSNRLRELAERMSTPAYLIDGAEDL-----------------QRNWF-DGVERVGI 265
Query: 310 TSGASTPDKAVEDVLKKVFE 329
T+GAS P+ V V++++ E
Sbjct: 266 TAGASAPEVLVRGVIQQLRE 285
>gi|424924981|ref|ZP_18348342.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pseudomonas fluorescens R124]
gi|404306141|gb|EJZ60103.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pseudomonas fluorescens R124]
Length = 314
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 136/316 (43%), Gaps = 70/316 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L I VEE D V +V+ A G +
Sbjct: 33 IYVRHEVVHNKFVVEDLRSRGA--IFVEE----LDQVPDDVIVIFSAHGVSQAVRSEAAG 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-----ASFAGKYIIVK 131
+ +++ D TCP V+KV V K+ + I+ G H E T S G +V+
Sbjct: 87 RGLKVFDATCPLVTKVHIEVAKYSRDGRECILIGHAGHPEVEGTMGQYDGSNGGAIYLVE 146
Query: 132 NMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGE 191
+ K+ EL + K AF+ QTT+ +
Sbjct: 147 DEKDV---------AELQVRNPEKLAFV-----------------------TQTTLSMDD 174
Query: 192 TEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWN 251
T + + +T G ++ IC ATQ RQDA+ ++ +E D++LVVG N
Sbjct: 175 TSRVIDAL-RTRFPAIGGPRKDD-------ICYATQNRQDAVKQLADE-CDVVLVVGSPN 225
Query: 252 SSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITS 311
SSN++ L+E+AE P+Y ID + + +++W +G IGIT+
Sbjct: 226 SSNSNRLRELAERMATPAYLIDGAEDL-----------------QKSWF-EGVERIGITA 267
Query: 312 GASTPDKAVEDVLKKV 327
GAS P+ V V++++
Sbjct: 268 GASAPEVLVRGVIQQL 283
>gi|398833793|ref|ZP_10591914.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Herbaspirillum sp. YR522]
gi|398220852|gb|EJN07287.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Herbaspirillum sp. YR522]
Length = 322
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 143/334 (42%), Gaps = 79/334 (23%)
Query: 4 IAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPA 63
I A +QF I++ +EI+HN V L A I +EE V G+ V+ A
Sbjct: 26 IVERALQQF-GAPIYVRHEIVHNAYVVADLR--AKGAIFIEE----LADVPAGNTVIFSA 78
Query: 64 FGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATA-- 121
G + + + + D TCP V+KV V K ++ I+ G H E T
Sbjct: 79 HGVSKAIQAEAAQRGLTVFDATCPLVTKVHMEVAKMRREGREIIMIGHAGHPEVEGTMGQ 138
Query: 122 SFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGI 181
+ AG +++ E V D A L+ +A+ +
Sbjct: 139 TEAGMHLV-------ETVGDV--------------ALLQVADEAL------------LAY 165
Query: 182 ANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKM 236
+QTT+ +T +I + + F IC AT RQ+A+ K
Sbjct: 166 VSQTTLSVDDTADI-------------ISALRARFPDIVEPKKGDICYATTNRQEAV-KF 211
Query: 237 VEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEK 296
+ +VD+++VVG NSSN++ L+E+AE +G+P++ +DS I P
Sbjct: 212 MAPQVDVVIVVGSPNSSNSNRLREVAEKKGVPAFMVDSAALIDP---------------- 255
Query: 297 ENWLPKGQITIGITSGASTPDKAVEDVLKKVFEI 330
W+ G+ IG+T+GAS P+ V+ V+ ++ EI
Sbjct: 256 -QWV-AGKHRIGVTAGASAPEVLVQAVIDRLKEI 287
>gi|355622853|ref|ZP_09046892.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium sp.
7_3_54FAA]
gi|354822737|gb|EHF07089.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium sp.
7_3_54FAA]
Length = 294
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 131/307 (42%), Gaps = 64/307 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I+ IIHN V + LEE V+ + E +Q VVV+ + G + L
Sbjct: 44 IYTFGPIIHNEEVVRDLEERGVKVLETAEELRQL----TDGVVVIRSHGVGKDIYDILEK 99
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
++I+D TCP+V K+ V + + II G H E + +V
Sbjct: 100 NGIEIIDATCPFVKKIHRIVSEQNENGRRVIIVGNGKHPEVEGIKGWGNDDTLV------ 153
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
T E F EK + + D K+ I QTT + ++
Sbjct: 154 ---------------IETAEEF-EKLQIS---------DGEKLCIVAQTTFNYNKFQD-- 186
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
LVEK ++ + + NTIC+ATQERQ + + +VD+++V+GG NSSNT
Sbjct: 187 -LVEKISKTRYDI-------LVLNTICNATQERQ-VEARQIASQVDVMIVIGGRNSSNTQ 237
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L EI +Y+I + K P EK + ++GIT+GASTP
Sbjct: 238 KLYEICRRECKETYYIQTLKDFKP--------------EKAGSVR----SVGITAGASTP 279
Query: 317 DKAVEDV 323
++ +E+V
Sbjct: 280 NQIIEEV 286
>gi|422296817|ref|ZP_16384477.1| hydroxymethylbutenyl pyrophosphate reductase [Pseudomonas avellanae
BPIC 631]
gi|407991931|gb|EKG33661.1| hydroxymethylbutenyl pyrophosphate reductase [Pseudomonas avellanae
BPIC 631]
Length = 315
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 130/311 (41%), Gaps = 60/311 (19%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L I VEE D V +V+ A G +
Sbjct: 33 IYVRHEVVHNKFVVEDLRSRGA--IFVEE----LDQVPDDVIVIFSAHGVSQAVRTEAAG 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V ++ + I+ G H E T G+Y
Sbjct: 87 RGLKVFDATCPLVTKVHIEVARYSRDGRECILIGHAGHPEVEGTM---GQY--------- 134
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
D + GG + + + + S F QTT+ +T +
Sbjct: 135 ----DAVNGGAIYLVEDEADVASLEVRNPESLAF-----------VTQTTLSMDDTSRVI 179
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+ K G + IC ATQ RQDA+ ++ +E D++LVVG NSSN++
Sbjct: 180 DALRKRFPAIGGPRK--------DDICYATQNRQDAVKQLADE-CDVVLVVGSPNSSNSN 230
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L+E+AE P+Y ID + + ++ W G IGIT+GAS P
Sbjct: 231 RLRELAERMATPAYLIDGAEDM-----------------QQGWF-DGVERIGITAGASAP 272
Query: 317 DKAVEDVLKKV 327
+ V V++++
Sbjct: 273 EVLVRGVIQQL 283
>gi|342218637|ref|ZP_08711247.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Megasphaera sp.
UPII 135-E]
gi|341589507|gb|EGS32782.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Megasphaera sp.
UPII 135-E]
Length = 636
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 136/304 (44%), Gaps = 70/304 (23%)
Query: 23 IIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIV 82
IIHNP V ++L + V P++ + V+ G+ V++ + G E K VQ+V
Sbjct: 35 IIHNPQVVQQLAQQGVT--PIDNLRS----VHAGETVLIRSHGVGPEVYEEAQEKKVQLV 88
Query: 83 DTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFA-GKYIIVKNMKEAEYVCD 141
D TCP V K +K + +I G+ +H E ++ + + + II+ +EA+ +
Sbjct: 89 DATCPHVKKAQQDAKKIVSQEKKLVIIGEKNHPEVISISQWGVNRAIIIDKEEEAQEI-- 146
Query: 142 YILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEK 201
F E G+ QTT + E+ +V+
Sbjct: 147 ---------------PFCENM-----------------GVVVQTTFSQ---EKYNHIVDI 171
Query: 202 TMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEI 261
++ H + TIC ATQ+ Q+A ++ +VD ++VVGG NS+NT L ++
Sbjct: 172 LKLK-------TNHLETHMTICTATQQCQEAAIELAR-RVDAMIVVGGRNSANTGRLAQV 223
Query: 262 AEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVE 321
++ P+Y I++ + + + + MH IGIT+GASTPD ++
Sbjct: 224 CREQDCPTYHIETAEEL---DLTQFHDMH---------------HIGITAGASTPDWIIQ 265
Query: 322 DVLK 325
+V+K
Sbjct: 266 EVVK 269
>gi|326776894|ref|ZP_08236159.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Streptomyces
griseus XylebKG-1]
gi|326657227|gb|EGE42073.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Streptomyces
griseus XylebKG-1]
Length = 329
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 139/328 (42%), Gaps = 71/328 (21%)
Query: 2 AFIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDV---VNKGDV 58
A IA E + I++ +EI+HN V + LE+ +G DV V +G +
Sbjct: 27 AVIAVEKALEQYGAPIYVRHEIVHNKYVVQTLEK---------KGAIFVDVTAEVPEGSI 77
Query: 59 VVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETV 118
V+ A G A + + +D TCP V+KV ++ K DY ++ G HEE +
Sbjct: 78 VMFSAHGVAPTVHAEAAERKLATIDATCPLVTKVHKEAVRYAKDDYDILLIGHEGHEEVI 137
Query: 119 ATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVK 178
T+ A +I + + E + E+ S K
Sbjct: 138 GTSGEAPDHIQLVDGPED------VANVEVRDES-------------------------K 166
Query: 179 VGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVE 238
V +QTT+ ET E + KF N + IC ATQ RQ A+ K+ E
Sbjct: 167 VVWLSQTTLSVDETME----TVDALKSKFP----NLLSPPSDDICYATQNRQIAVKKLAE 218
Query: 239 EKVDLILVVGGWNSSNTSHLQEIAEDRGIP-SYWIDSEKRIGPGNKIAYKLMHGELVEKE 297
+ +L++VVG NSSN+ + E+A D G P ++ +D I E
Sbjct: 219 D-AELVIVVGSKNSSNSIRMVEVALDAGAPAAHLVDFASEI-----------------DE 260
Query: 298 NWLPKGQITIGITSGASTPDKAVEDVLK 325
WL G T+G+TSGAS PD V+ VL+
Sbjct: 261 AWL-DGVTTVGLTSGASVPDVLVDGVLE 287
>gi|312602670|ref|YP_004022515.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
rhizoxinica HKI 454]
gi|312169984|emb|CBW76996.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)
[Burkholderia rhizoxinica HKI 454]
Length = 311
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 132/310 (42%), Gaps = 68/310 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V + L+ + I + G V + A G A +
Sbjct: 37 VYVRHEIVHNRHVVESLKAKGARFI------DELSEAPPGAVTIFSAHGVAKAVEDEAHE 90
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++++ TCP V+KV + + K I+ G H E + T
Sbjct: 91 RGLRVLNATCPLVTKVHLQGKNYLKSGRQVILIGHAGHPEILGTM--------------- 135
Query: 137 EYVCDYILGGELNGSSST--KEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEE 194
G+++G S EA +E+ D VD V QTT+ ET
Sbjct: 136 ---------GQIDGPVSLVQTEADVERL--------DIPVD-TPVSYVTQTTLSVDETRG 177
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
I +++ G + + IC ATQ RQ A+ ++ + + D++LVVG NSSN
Sbjct: 178 IIAALKRRFTDIVGPDTKD--------ICYATQNRQTAVRELCK-RADVLLVVGATNSSN 228
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
++ L+EI + G+PSY + + P W+ +G TIG+T+GAS
Sbjct: 229 SNRLREIGAESGVPSYLLADGSELNP-----------------QWV-RGANTIGLTAGAS 270
Query: 315 TPDKAVEDVL 324
P+ V DV+
Sbjct: 271 APESMVNDVI 280
>gi|422315548|ref|ZP_16396980.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Fusobacterium
periodonticum D10]
gi|404592316|gb|EKA94164.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Fusobacterium
periodonticum D10]
Length = 827
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 142/310 (45%), Gaps = 61/310 (19%)
Query: 18 WITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNK 77
+I ++HN V + +E + + EE + D + + D+VV+ A G + L +
Sbjct: 33 YILGMLVHNKQVVEDMERKGFKLVKEEELLEDIDDLKENDIVVVRAHGTSKNVHEKLKER 92
Query: 78 NVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEAE 137
V++ D TC +V+K+ +E + Y+ + G +H E SFA I ++++EA
Sbjct: 93 KVKVYDATCVFVNKIRQEIEIANEKGYSILFMGDKNHPEVKGVISFADNIQIFESLEEA- 151
Query: 138 YVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGK 197
+ D D + ++ QTT+ K + EE+
Sbjct: 152 ----------------------------IEVKIDSDKTYL---LSTQTTLNKKKFEEV-- 178
Query: 198 LVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSH 257
+K+ EN ++ I F+ IC AT RQ A+ + K +++++VG SSNT
Sbjct: 179 -------KKYFKENY-QNVIIFDKICGATAVRQKAVEDLAV-KANIVIIVGDTKSSNTKK 229
Query: 258 LQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPD 317
L EI++ SY +++E+++ + + +G+ IGIT+GASTP+
Sbjct: 230 LYEISKKLNSESYLVENEEQL------------------DLTIFRGKEVIGITAGASTPE 271
Query: 318 KAVEDVLKKV 327
+ + ++ KK+
Sbjct: 272 ETIMNIEKKI 281
>gi|319760264|ref|YP_004124202.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Candidatus
Blochmannia vafer str. BVAF]
gi|318038978|gb|ADV33528.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Candidatus
Blochmannia vafer str. BVAF]
Length = 315
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 137/311 (44%), Gaps = 58/311 (18%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V K L + V + VE+ D V G V++ A G + +
Sbjct: 34 IYVKHELVHNDYVIKELLNLGV--VFVED----LDDVPNGSVLIFSAHGVSRAVKKQSKD 87
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
K + ++D TCP VSKV V + K + I+ G H E + G+Y + N +
Sbjct: 88 KELIVLDATCPLVSKVHMKVLRASKKEMEIILIGHAGHPE---VSGIIGQYEYINNTDRS 144
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
Y+ S K+A+ K PD + QTT+ +T EI
Sbjct: 145 IYLV-----------QSKKDAWSIKVNY-------PD----NLSYVTQTTLSIDDTVEII 182
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+++++ R + N IC AT RQ A+ K+ ++IL+VG SSN++
Sbjct: 183 EILKRRFPRILAPKK--------NDICYATSNRQVALKKL-ALLTEVILIVGSKQSSNSN 233
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L E+A G P+Y I I + +W+ TIGIT+GASTP
Sbjct: 234 RLLELAYKIGKPAYLISDASYI-----------------QVDWICNVN-TIGITAGASTP 275
Query: 317 DKAVEDVLKKV 327
+ VE V+ ++
Sbjct: 276 EILVEQVIDRL 286
>gi|254819702|ref|ZP_05224703.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
intracellulare ATCC 13950]
gi|379745855|ref|YP_005336676.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
intracellulare ATCC 13950]
gi|379753150|ref|YP_005341822.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
intracellulare MOTT-02]
gi|379760575|ref|YP_005346972.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
intracellulare MOTT-64]
gi|387874519|ref|YP_006304823.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
sp. MOTT36Y]
gi|406029455|ref|YP_006728346.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
indicus pranii MTCC 9506]
gi|443304452|ref|ZP_21034240.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
sp. H4Y]
gi|378798219|gb|AFC42355.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
intracellulare ATCC 13950]
gi|378803366|gb|AFC47501.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
intracellulare MOTT-02]
gi|378808517|gb|AFC52651.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
intracellulare MOTT-64]
gi|386787977|gb|AFJ34096.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
sp. MOTT36Y]
gi|405128002|gb|AFS13257.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
indicus pranii MTCC 9506]
gi|442766016|gb|ELR84010.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Mycobacterium
sp. H4Y]
Length = 332
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 135/314 (42%), Gaps = 65/314 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V LE+ + ++ D V +G +VV A G A
Sbjct: 55 VYVRHEIVHNRHVVSTLEKAGAVFV------EETDEVPEGAIVVFSAHGVAPSVHSAAAE 108
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+N+ +D TCP V+KV + + DY ++ G HEE V TA A ++ +
Sbjct: 109 RNLHTIDATCPLVTKVHNEARRFARNDYDILLIGHEGHEEVVGTAGEAPDHVQL------ 162
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
++G ++ + K V +QTT+ ET EI
Sbjct: 163 -----------VDGVAAVDNVTVRDEDKVV--------------WLSQTTLSVDETMEI- 196
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
VE+ R +++ + IC ATQ RQ A+ M E +L++VVG NSSN+
Sbjct: 197 --VERLRQRFPKLQDPPS-----DDICYATQNRQVAVKAMAPE-CELVIVVGSRNSSNSV 248
Query: 257 HLQEI-AEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
L E+ ++ +D I P WL +G T+G+TSGAS
Sbjct: 249 RLVEVALGGGAAAAHLVDWADDIDPA-----------------WL-EGVTTVGVTSGASV 290
Query: 316 PDKAVEDVLKKVFE 329
P+ V+ VL+++ E
Sbjct: 291 PEVLVQGVLERLAE 304
>gi|160872865|ref|ZP_02062997.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Rickettsiella
grylli]
gi|159121664|gb|EDP47002.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Rickettsiella
grylli]
Length = 316
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 137/315 (43%), Gaps = 69/315 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +E++HN + L++ V + + + G + A G ++
Sbjct: 33 LYVRHEVVHNRMIVAELQQKGVTFV------EHIQQIPMGATAIFSAHGVSLSVREAAKQ 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASF----AGKYIIVKN 132
+N++I D TCP V+KV V ++ + I+ G H E + G +V+N
Sbjct: 87 RNLKIFDATCPLVTKVHMEVARYNRLGQECILIGHADHPEVEGSLGHYDNPRGGIYLVEN 146
Query: 133 MKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGET 192
+ + LN + + +++ QTT+ +T
Sbjct: 147 LDDI---------ASLNVKNPSLLSYV-----------------------TQTTLSLDDT 174
Query: 193 EEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNS 252
+ I K + K K + IC ATQ RQ A+ K + ++ D++ V+G NS
Sbjct: 175 QVIVKAL-KARFPKISTPKKED-------ICYATQNRQQAV-KELTQQCDIVFVLGSVNS 225
Query: 253 SNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSG 312
SN++ L+E+AE G P+Y IDS K I L H W G+ +IGIT+G
Sbjct: 226 SNSNRLKELAERLGKPAYLIDSAKDI---------LAH--------WF-IGKKSIGITAG 267
Query: 313 ASTPDKAVEDVLKKV 327
AS P+ V++V+K++
Sbjct: 268 ASAPEFLVQEVVKQI 282
>gi|418020803|ref|ZP_12660005.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Candidatus Regiella insecticola R5.15]
gi|347603839|gb|EGY28602.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Candidatus Regiella insecticola R5.15]
Length = 317
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 138/325 (42%), Gaps = 66/325 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L + I +E+ V +G +++ A G V + V
Sbjct: 33 IYVRHEVVHNRYVVNDLSQRGA--IFIED----ISEVPEGSILIFSAHG--VSQAVRQEA 84
Query: 77 KNVQI---VDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNM 133
K Q+ +D TCP V+KV V + +++ G H E T G+Y N
Sbjct: 85 KRRQLTLLLDATCPLVTKVHMEVARASHRGIEAVLIGHAGHPEVEGTM---GQY---NNP 138
Query: 134 KEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETE 193
+ Y L GS E + K D + QTT+ +T
Sbjct: 139 QGGIY---------LVGSPEDVEQLVVK-------------DANNLCFMTQTTLSIDDTS 176
Query: 194 EIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSS 253
I + + G + IC AT RQ+A+ + + + D ILVVG NSS
Sbjct: 177 VIIDALRQRFPHITGPRK--------DDICYATTNRQEAVRDLAQ-RADCILVVGSKNSS 227
Query: 254 NTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGA 313
N++ L E+A+ G +Y IDS I P WL Q TIG+T+GA
Sbjct: 228 NSNRLAELAQRMGKQAYLIDSATDIQP-----------------EWLINAQ-TIGVTAGA 269
Query: 314 STPDKAVEDVLKKVFEIKREEALQL 338
S PD V+ V+K++ + +EA++L
Sbjct: 270 SAPDILVQQVIKRLQSLGAQEAIEL 294
>gi|422591464|ref|ZP_16666107.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
syringae pv. morsprunorum str. M302280]
gi|422653327|ref|ZP_16716095.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
syringae pv. actinidiae str. M302091]
gi|330878967|gb|EGH13116.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
syringae pv. morsprunorum str. M302280]
gi|330966378|gb|EGH66638.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
syringae pv. actinidiae str. M302091]
Length = 315
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 130/311 (41%), Gaps = 60/311 (19%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L I VEE D V +V+ A G +
Sbjct: 33 IYVRHEVVHNKFVVEDLRSRGA--IFVEE----LDQVPDDVIVIFSAHGVSQAVRTEAAG 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V ++ + I+ G H E T G+Y
Sbjct: 87 RGLKVFDATCPLVTKVHIEVARYSRDGRECILIGHAGHPEVEGTM---GQY--------- 134
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
D + GG + + + + S F QTT+ +T +
Sbjct: 135 ----DAVNGGAIYLVEDEADVASLEVRNPESLAF-----------VTQTTLSMDDTSRVI 179
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
+ K G + IC ATQ RQDA+ ++ +E D++LVVG NSSN++
Sbjct: 180 DALRKRFPAIGGPRK--------DDICYATQNRQDAVKQLADE-CDVVLVVGSPNSSNSN 230
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L+E+AE P+Y ID + + ++ W G IGIT+GAS P
Sbjct: 231 RLRELAERMATPAYLIDGAEDM-----------------QQGWF-DGVERIGITAGASAP 272
Query: 317 DKAVEDVLKKV 327
+ V V++++
Sbjct: 273 EVLVRGVIQQL 283
>gi|70732623|ref|YP_262386.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
protegens Pf-5]
gi|123652817|sp|Q4K5U7.1|ISPH_PSEF5 RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|68346922|gb|AAY94528.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
protegens Pf-5]
Length = 315
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 135/316 (42%), Gaps = 70/316 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L I VEE D V +V+ A G +
Sbjct: 33 IYVRHEVVHNKFVVEDLRNRGA--IFVEE----LDQVPDDVIVIFSAHGVSQAVRSEAAG 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-----ASFAGKYIIVK 131
+ +++ D TCP V+KV V ++ + I+ G H E T AS G +V+
Sbjct: 87 RGLKVFDATCPLVTKVHIEVARYSRDGRECILIGHAGHPEVEGTMGQYDASNGGAIYLVE 146
Query: 132 NMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGE 191
+ K+ EL + + AF+ QTT+ +
Sbjct: 147 DEKDV---------AELQVRNPERLAFV-----------------------TQTTLSMDD 174
Query: 192 TEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWN 251
T + + +T G ++ IC ATQ RQDA+ ++ +E D++LVVG N
Sbjct: 175 TSRVIDAL-RTRFPAIGGPRKDD-------ICYATQNRQDAVKQLADE-CDVVLVVGSPN 225
Query: 252 SSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITS 311
SSN++ L+E+AE P+Y ID + + + +W G IGIT+
Sbjct: 226 SSNSNRLRELAERMATPAYLIDGAEDL-----------------QRSWF-DGVERIGITA 267
Query: 312 GASTPDKAVEDVLKKV 327
GAS P+ V V++++
Sbjct: 268 GASAPEVLVRGVIQQL 283
>gi|323691767|ref|ZP_08106024.1| hypothetical protein HMPREF9475_00886 [Clostridium symbiosum
WAL-14673]
gi|323504133|gb|EGB19938.1| hypothetical protein HMPREF9475_00886 [Clostridium symbiosum
WAL-14673]
Length = 283
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 131/307 (42%), Gaps = 64/307 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I+ IIHN V + LEE V+ + E +Q VVV+ + G + L
Sbjct: 33 IYTFGPIIHNEEVVRDLEERGVKVLETAEELRQL----TDGVVVIRSHGVGKDIYDILEK 88
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
++I+D TCP+V K+ V + + II G H E + +V
Sbjct: 89 NGIEIIDATCPFVKKIHRIVSEQNENGRRVIIVGNGKHPEVEGIKGWGNDDTLV------ 142
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
T E F EK + + D K+ I QTT + ++
Sbjct: 143 ---------------IETAEEF-EKLQIS---------DGEKLCIVAQTTFNYNKFQD-- 175
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
LVEK ++ + + NTIC+ATQERQ + + +VD+++V+GG NSSNT
Sbjct: 176 -LVEKISKTRYDI-------LVLNTICNATQERQ-VEARQIASQVDVMIVIGGRNSSNTQ 226
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L EI +Y+I + K P EK + ++GIT+GASTP
Sbjct: 227 KLYEICRRECKETYYIQTLKDFKP--------------EKAGSVR----SVGITAGASTP 268
Query: 317 DKAVEDV 323
++ +E+V
Sbjct: 269 NQIIEEV 275
>gi|262373608|ref|ZP_06066886.1| LytB protein [Acinetobacter junii SH205]
gi|262311361|gb|EEY92447.1| LytB protein [Acinetobacter junii SH205]
Length = 316
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 134/313 (42%), Gaps = 64/313 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L + + + D V +V+ A G +
Sbjct: 33 IYVRHEVVHNKFVVDDLRQRGAVFV------DELDQVPDDSIVIFSAHGVSKAVQQEAER 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V K+ + +I+ G H E T G+Y
Sbjct: 87 RGLKVFDATCPLVTKVHIEVTKYAREGTEAILIGHEGHPEVEGTM---GQY--------- 134
Query: 137 EYVCDYILGGE--LNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEE 194
D GGE L EA + K + KV QTT+ +T +
Sbjct: 135 ----DKSKGGEIYLVEDEDDVEALVVKHPE-------------KVAFVTQTTLSIDDTAK 177
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
+ + K G + IC ATQ RQDA+ + E+ D++LVVG NSSN
Sbjct: 178 VIDALRKKYPMIMGPRK--------DDICYATQNRQDAVRDLAEQ-CDVVLVVGSPNSSN 228
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
++ L+E+AE G +Y +D + E +EK +W K IG+T+GAS
Sbjct: 229 SNRLRELAERMGKSAYLVD----------------NAEELEK-DWF-KSDSKIGVTAGAS 270
Query: 315 TPDKAVEDVLKKV 327
P+ ++ V++++
Sbjct: 271 APEILIKQVIQRL 283
>gi|387891990|ref|YP_006322287.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
fluorescens A506]
gi|423689859|ref|ZP_17664379.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
fluorescens SS101]
gi|387160589|gb|AFJ55788.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
fluorescens A506]
gi|388001900|gb|EIK63229.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Pseudomonas
fluorescens SS101]
Length = 315
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 140/313 (44%), Gaps = 64/313 (20%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L A I VEE D V +V+ A G +
Sbjct: 33 IYVRHEVVHNKFVVEDLR--ARGAIFVEE----LDQVPDDVIVIFSAHGVSQAVRTEAAG 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V ++ + I+ G H E T G+Y
Sbjct: 87 RGLKVFDATCPLVTKVHIEVARYSRDGRECILIGHAGHPEVEGTM---GQY--------- 134
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVS--KGFDPDVDLVKVGIANQTTMLKGETEE 194
D GG + +L + +K V+ + +PD ++ QTT+ +T
Sbjct: 135 ----DASNGGAI---------YLVEDEKDVANLQVHNPD----RLAFVTQTTLSMDDTSR 177
Query: 195 IGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSN 254
+ + +T G ++ IC ATQ RQDA+ ++ +E D++LVVG NSSN
Sbjct: 178 VIDAL-RTRFPAIGGPRKDD-------ICYATQNRQDAVKQLADE-CDVVLVVGSPNSSN 228
Query: 255 TSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAS 314
++ L+E+AE P+Y ID + + + +W G IGIT+GAS
Sbjct: 229 SNRLRELAERMATPAYLIDGAEDM-----------------QRSWF-DGVERIGITAGAS 270
Query: 315 TPDKAVEDVLKKV 327
P+ V V++++
Sbjct: 271 APEVLVRGVIQQL 283
>gi|307246437|ref|ZP_07528510.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|307255420|ref|ZP_07537227.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|307259872|ref|ZP_07541586.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|306852641|gb|EFM84873.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|306861604|gb|EFM93591.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|306866042|gb|EFM97916.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
Length = 314
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 137/317 (43%), Gaps = 73/317 (23%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L+ A + VEE D V G +V+ A G + E
Sbjct: 33 IYVRHEVVHNRFVVDGLK--AKGAVFVEE----LDEVPDGAIVIFSAHGVSQEVRQEAKR 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V + K +I+ G H E + T G+Y N
Sbjct: 87 RGLKVFDATCPLVTKVHMQVARASKKGTKAILIGHEGHPEVIGTM---GQY---DNQNAG 140
Query: 137 EYVCDYILG-GELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
++ + + +L SS F+ QTT+ +T ++
Sbjct: 141 IFLVESVEDIAKLPVSSQDDLTFM-----------------------TQTTLSIDDTSDV 177
Query: 196 GKLVEKTMMRKFGVENVNEHFISF-----NTICDATQERQDAMYKMVEEKVDLILVVGGW 250
+E + E + + N IC AT RQ A+ ++ ++ L+LVVG
Sbjct: 178 -------------IEVLKEKYPAIQGPRKNDICYATTNRQQAVRELAKQS-QLVLVVGSK 223
Query: 251 NSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGIT 310
NSSN++ L E+A G+PS ID + I P +WL G TIGIT
Sbjct: 224 NSSNSNRLAELASRMGVPSKLIDGPQDIDP-----------------SWL-DGVETIGIT 265
Query: 311 SGASTPDKAVEDVLKKV 327
+GAS P+ V+ V++ +
Sbjct: 266 AGASAPEVLVQSVVEHL 282
>gi|413965402|ref|ZP_11404628.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
sp. SJ98]
gi|413928076|gb|EKS67365.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Burkholderia
sp. SJ98]
Length = 320
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 128/309 (41%), Gaps = 66/309 (21%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
+++ +EI+HN V L + + ++ D V G V + A G A
Sbjct: 33 VYVRHEIVHNRHVVDNLRSKGAKFV------EELDEVPHGAVAIFSAHGVAQSVEKDART 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-ASFAGKYIIVKNMKE 135
+ + ++D TCP V+KV ++ T I+ G H E T G ++V++ E
Sbjct: 87 RGLDVLDATCPLVTKVHVQGRQYVSQGRTLILIGHAGHPEVEGTIGQIPGVVVLVQS--E 144
Query: 136 AEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEI 195
AE + PD + V QTT+ +T I
Sbjct: 145 AE---------------------------VATMTLAPDTPVAYV---TQTTLSVDDTRGI 174
Query: 196 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNT 255
+++ G + + IC ATQ RQ A+ ++ +VD++LVVG NSSN+
Sbjct: 175 IDALQRRFTDIVGPDTRD--------ICYATQNRQAAVREL-STQVDVLLVVGATNSSNS 225
Query: 256 SHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGAST 315
+ L+EI + G+PSY + I P W Q T+GIT+GAS
Sbjct: 226 NRLREIGAESGVPSYLVADGSEIKP-----------------EWFADVQ-TVGITAGASA 267
Query: 316 PDKAVEDVL 324
P++ V+ V+
Sbjct: 268 PEEMVKHVI 276
>gi|398865223|ref|ZP_10620745.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pseudomonas sp. GM78]
gi|398243747|gb|EJN29326.1| (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
[Pseudomonas sp. GM78]
Length = 315
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 135/316 (42%), Gaps = 70/316 (22%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V + L + VEE D V +V+ A G +
Sbjct: 33 IYVRHEVVHNKFVVEDLRNRGA--VFVEE----LDQVPDDVIVIFSAHGVSQAVRTEAAG 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVAT-----ASFAGKYIIVK 131
+ +++ D TCP V+KV V ++ + I+ G H E T AS G +V+
Sbjct: 87 RGLKVFDATCPLVTKVHIEVARYSRDGRECILIGHAGHPEVEGTMGQYDASSGGAIYLVE 146
Query: 132 NMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGE 191
+ K+ EL + K AF+ QTT+ +
Sbjct: 147 DEKDV---------AELQVRNPEKLAFV-----------------------TQTTLSMDD 174
Query: 192 TEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWN 251
T + + +T G ++ IC ATQ RQDA+ ++ +E D++LVVG N
Sbjct: 175 TSRVIDAL-RTRFPAIGGPRKDD-------ICYATQNRQDAVKQLADE-CDVVLVVGSPN 225
Query: 252 SSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITS 311
SSN++ L+E+AE P+Y ID + + ++W G IGIT+
Sbjct: 226 SSNSNRLRELAERMSTPAYLIDGAEDL-----------------DKSWF-DGVERIGITA 267
Query: 312 GASTPDKAVEDVLKKV 327
GAS P+ V V++++
Sbjct: 268 GASAPEVLVRGVIQQL 283
>gi|262377080|ref|ZP_06070306.1| LytB protein [Acinetobacter lwoffii SH145]
gi|262308118|gb|EEY89255.1| LytB protein [Acinetobacter lwoffii SH145]
Length = 316
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 140/311 (45%), Gaps = 60/311 (19%)
Query: 17 IWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNN 76
I++ +E++HN V L + I V+E D V ++V+ A G +
Sbjct: 33 IYVRHEVVHNKFVVDDLRQRGA--IFVDE----LDEVPDDNIVIFSAHGVSKAVQQEAER 86
Query: 77 KNVQIVDTTCPWVSKVWTSVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIIVKNMKEA 136
+ +++ D TCP V+KV V K+ + +I+ G H E T G+Y
Sbjct: 87 RGLKVFDATCPLVTKVHIEVTKYAREGVEAILIGHEGHPEVEGTM---GQY--------- 134
Query: 137 EYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIG 196
D GGE+ ++ A +P+ KV QTT+ ++
Sbjct: 135 ----DKKNGGEIYLVEDEEDV-------AALTVRNPE----KVAFVTQTTL---SIDDTA 176
Query: 197 KLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTS 256
K+++ + +KF + + IC ATQ RQDA+ + E + D++LVVG NSSN++
Sbjct: 177 KVID-ALRQKFPLIQGPRK----DDICYATQNRQDAVRDLAE-RCDVVLVVGSPNSSNSN 230
Query: 257 HLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTP 316
L+E+AE G +Y +D+ + K+ W G IG+T+GAS P
Sbjct: 231 RLRELAERMGKSAYLVDNADEL-----------------KQEWF-AGNAQIGVTAGASAP 272
Query: 317 DKAVEDVLKKV 327
+ ++ V++++
Sbjct: 273 EILIKQVIQRL 283
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.132 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,256,887,224
Number of Sequences: 23463169
Number of extensions: 217506287
Number of successful extensions: 497555
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1994
Number of HSP's successfully gapped in prelim test: 1227
Number of HSP's that attempted gapping in prelim test: 487186
Number of HSP's gapped (non-prelim): 5923
length of query: 339
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 196
effective length of database: 9,003,962,200
effective search space: 1764776591200
effective search space used: 1764776591200
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 77 (34.3 bits)