Query 019558
Match_columns 339
No_of_seqs 314 out of 2995
Neff 8.3
Searched_HMMs 46136
Date Fri Mar 29 02:43:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019558.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019558hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK10146 aminoalkylphosphonic 99.7 3.4E-17 7.3E-22 135.6 14.0 136 4-151 2-137 (144)
2 TIGR03448 mycothiol_MshD mycot 99.7 4.3E-16 9.3E-21 144.6 18.2 253 10-289 5-272 (292)
3 PRK01346 hypothetical protein; 99.7 1.9E-14 4.1E-19 140.1 26.1 267 4-302 5-294 (411)
4 PHA00673 acetyltransferase dom 99.7 1.3E-15 2.8E-20 126.6 15.2 133 11-152 12-146 (154)
5 PRK03624 putative acetyltransf 99.7 1E-15 2.3E-20 125.2 14.4 129 5-152 2-130 (140)
6 PF13527 Acetyltransf_9: Acety 99.7 2.4E-15 5.2E-20 122.0 14.0 126 7-149 1-126 (127)
7 PTZ00330 acetyltransferase; Pr 99.7 5.5E-15 1.2E-19 122.7 15.8 136 4-152 5-141 (147)
8 PRK10140 putative acetyltransf 99.6 1E-14 2.2E-19 122.9 16.5 138 4-153 2-142 (162)
9 KOG3216 Diamine acetyltransfer 99.6 6.1E-15 1.3E-19 119.6 13.9 137 4-152 2-146 (163)
10 TIGR02382 wecD_rffC TDP-D-fuco 99.6 5.5E-15 1.2E-19 128.9 14.5 137 5-153 43-186 (191)
11 KOG3139 N-acetyltransferase [G 99.6 1.3E-14 2.7E-19 119.1 15.0 137 6-158 14-152 (165)
12 PLN02706 glucosamine 6-phospha 99.6 1.5E-14 3.3E-19 120.8 15.7 136 4-152 5-144 (150)
13 PF00583 Acetyltransf_1: Acety 99.6 1.4E-14 3.1E-19 108.2 12.4 83 60-148 1-83 (83)
14 TIGR02406 ectoine_EctA L-2,4-d 99.6 1.3E-14 2.7E-19 122.7 13.3 124 8-149 1-125 (157)
15 PF13523 Acetyltransf_8: Acety 99.6 3.8E-14 8.2E-19 118.7 14.4 144 8-156 1-145 (152)
16 PRK10975 TDP-fucosamine acetyl 99.6 5.6E-14 1.2E-18 122.8 14.4 136 6-153 47-189 (194)
17 PRK07922 N-acetylglutamate syn 99.6 5.3E-14 1.1E-18 120.4 13.8 123 3-151 3-126 (169)
18 TIGR03827 GNAT_ablB putative b 99.6 6.4E-14 1.4E-18 128.6 15.3 133 4-153 114-246 (266)
19 PRK09491 rimI ribosomal-protei 99.6 9.6E-14 2.1E-18 115.5 15.0 126 5-153 1-126 (146)
20 TIGR03103 trio_acet_GNAT GNAT- 99.6 1E-13 2.2E-18 139.0 17.1 136 4-153 81-218 (547)
21 PF13673 Acetyltransf_10: Acet 99.5 8.6E-14 1.9E-18 110.8 12.6 113 16-147 1-117 (117)
22 COG0456 RimI Acetyltransferase 99.5 1.4E-13 3.1E-18 117.7 13.3 137 4-154 10-156 (177)
23 PRK07757 acetyltransferase; Pr 99.5 2.3E-13 5E-18 113.9 14.2 123 5-153 1-123 (152)
24 TIGR01575 rimI ribosomal-prote 99.5 3.6E-13 7.9E-18 108.9 14.2 118 16-154 1-118 (131)
25 PF13420 Acetyltransf_4: Acety 99.5 6.2E-13 1.4E-17 111.4 15.9 136 8-154 1-141 (155)
26 PRK10514 putative acetyltransf 99.5 4.5E-13 9.8E-18 111.1 12.5 124 6-153 2-127 (145)
27 COG3153 Predicted acetyltransf 99.5 1.1E-12 2.4E-17 110.9 14.3 134 4-156 2-135 (171)
28 TIGR03448 mycothiol_MshD mycot 99.5 1.1E-12 2.3E-17 121.8 15.4 140 4-153 148-289 (292)
29 COG1247 Sortase and related ac 99.5 2.2E-12 4.8E-17 108.8 15.3 141 5-154 1-145 (169)
30 PRK15130 spermidine N1-acetylt 99.5 1.5E-12 3.2E-17 112.8 14.8 140 3-153 4-146 (186)
31 PHA01807 hypothetical protein 99.5 1.7E-12 3.7E-17 108.8 13.5 125 14-145 11-136 (153)
32 PRK10809 ribosomal-protein-S5- 99.4 8.2E-12 1.8E-16 108.9 16.6 141 3-153 15-167 (194)
33 TIGR03585 PseH pseudaminic aci 99.4 3.2E-12 7E-17 107.1 12.3 135 7-153 2-139 (156)
34 PRK12308 bifunctional arginino 99.4 2.8E-12 6.1E-17 130.7 14.2 124 4-153 462-585 (614)
35 KOG3396 Glucosamine-phosphate 99.4 2.8E-12 6E-17 102.0 11.0 134 5-151 6-143 (150)
36 PRK10151 ribosomal-protein-L7/ 99.4 1.4E-11 3E-16 106.0 16.4 140 3-153 8-156 (179)
37 PRK10562 putative acetyltransf 99.4 5.7E-12 1.2E-16 104.7 13.4 121 8-152 2-125 (145)
38 KOG3235 Subunit of the major N 99.4 3.1E-12 6.7E-17 104.3 10.9 132 6-153 2-136 (193)
39 PF13508 Acetyltransf_7: Acety 99.4 6.9E-12 1.5E-16 93.2 11.7 77 55-149 3-79 (79)
40 PLN02825 amino-acid N-acetyltr 99.4 4.7E-12 1E-16 124.9 13.7 122 7-152 369-490 (515)
41 COG1246 ArgA N-acetylglutamate 99.4 3.2E-12 7E-17 105.0 10.3 121 7-151 2-122 (153)
42 PRK10314 putative acyltransfer 99.4 4.1E-12 9E-17 106.9 11.2 126 8-153 9-135 (153)
43 PRK05279 N-acetylglutamate syn 99.4 8.3E-12 1.8E-16 122.6 13.8 123 6-152 295-417 (441)
44 PRK09831 putative acyltransfer 99.3 8.3E-12 1.8E-16 104.1 11.0 122 6-154 1-128 (147)
45 TIGR01686 FkbH FkbH-like domai 99.3 2.5E-11 5.4E-16 114.4 15.5 127 4-149 185-318 (320)
46 TIGR01890 N-Ac-Glu-synth amino 99.3 1.8E-11 3.9E-16 119.8 14.1 123 6-152 283-405 (429)
47 PF13302 Acetyltransf_3: Acety 99.3 5.1E-11 1.1E-15 97.9 13.5 133 5-148 1-142 (142)
48 KOG3234 Acetyltransferase, (GN 99.2 3E-11 6.5E-16 98.6 8.4 104 46-158 33-137 (173)
49 PRK13688 hypothetical protein; 99.2 1.1E-10 2.4E-15 98.3 10.8 115 8-153 20-134 (156)
50 cd02169 Citrate_lyase_ligase C 99.2 1.6E-10 3.4E-15 107.1 10.7 78 55-151 6-83 (297)
51 PF08445 FR47: FR47-like prote 99.1 1.2E-09 2.5E-14 82.8 10.7 61 90-152 22-82 (86)
52 KOG2488 Acetyltransferase (GNA 99.1 1.6E-09 3.4E-14 91.4 10.7 92 53-152 90-182 (202)
53 TIGR00124 cit_ly_ligase [citra 99.0 4.4E-09 9.6E-14 99.0 11.2 80 55-153 31-110 (332)
54 KOG3138 Predicted N-acetyltran 98.9 2.3E-09 4.9E-14 91.8 7.0 139 6-158 17-158 (187)
55 COG3981 Predicted acetyltransf 98.9 2E-08 4.4E-13 83.8 11.4 141 4-152 2-159 (174)
56 COG1670 RimL Acetyltransferase 98.9 5.4E-08 1.2E-12 83.0 14.3 141 4-153 8-159 (187)
57 COG3393 Predicted acetyltransf 98.9 1.4E-08 3E-13 90.5 9.8 80 63-154 185-264 (268)
58 KOG3397 Acetyltransferases [Ge 98.8 2.2E-08 4.9E-13 83.1 7.0 88 55-155 57-144 (225)
59 TIGR01211 ELP3 histone acetylt 98.6 3E-07 6.5E-12 91.4 11.7 92 55-152 411-516 (522)
60 COG2153 ElaA Predicted acyltra 98.6 2.2E-07 4.7E-12 75.4 8.4 87 55-153 50-137 (155)
61 cd04301 NAT_SF N-Acyltransfera 98.6 3.1E-07 6.8E-12 63.2 8.3 63 58-128 2-64 (65)
62 PF13718 GNAT_acetyltr_2: GNAT 98.5 1.8E-06 3.8E-11 74.9 12.1 106 45-152 17-176 (196)
63 PF12746 GNAT_acetyltran: GNAT 98.5 1.5E-06 3.3E-11 79.1 11.7 88 55-157 165-252 (265)
64 KOG4135 Predicted phosphogluco 98.5 4.4E-06 9.5E-11 67.9 12.6 150 4-155 12-173 (185)
65 PF12568 DUF3749: Acetyltransf 98.4 1.2E-05 2.5E-10 64.4 14.4 84 54-150 37-123 (128)
66 COG4552 Eis Predicted acetyltr 98.4 3E-06 6.4E-11 78.4 10.1 221 55-298 39-271 (389)
67 COG3818 Predicted acetyltransf 98.3 2.9E-06 6.3E-11 67.4 7.6 139 5-157 7-153 (167)
68 KOG4144 Arylalkylamine N-acety 98.2 9.3E-07 2E-11 72.2 2.9 136 5-152 11-161 (190)
69 PF14542 Acetyltransf_CG: GCN5 98.1 4.8E-05 1E-09 56.3 9.8 67 58-140 2-68 (78)
70 COG3375 Uncharacterized conser 98.1 5.6E-05 1.2E-09 65.7 11.5 132 5-149 2-134 (266)
71 PF08444 Gly_acyl_tr_C: Aralky 98.1 1.6E-05 3.4E-10 59.7 6.9 58 90-149 20-77 (89)
72 COG1444 Predicted P-loop ATPas 98.0 0.00011 2.3E-09 75.5 14.4 105 45-152 460-591 (758)
73 COG2388 Predicted acetyltransf 97.9 4.9E-05 1.1E-09 58.6 6.6 63 53-125 13-75 (99)
74 TIGR03827 GNAT_ablB putative b 97.8 0.00027 5.9E-09 64.8 11.8 169 104-289 20-229 (266)
75 PF13480 Acetyltransf_6: Acety 97.7 0.0013 2.9E-08 53.3 13.3 115 5-130 19-135 (142)
76 COG0454 WecD Histone acetyltra 97.6 9.3E-05 2E-09 56.1 4.7 44 95-147 87-130 (156)
77 COG3053 CitC Citrate lyase syn 97.3 0.0015 3.1E-08 59.4 9.3 77 57-152 38-115 (352)
78 COG5628 Predicted acetyltransf 97.1 0.0073 1.6E-07 47.6 9.7 83 55-148 37-119 (143)
79 PF06852 DUF1248: Protein of u 97.0 0.014 2.9E-07 50.2 11.9 118 58-182 49-172 (181)
80 PF04958 AstA: Arginine N-succ 97.0 0.0069 1.5E-07 57.0 10.7 143 5-149 1-185 (342)
81 PF01233 NMT: Myristoyl-CoA:pr 97.0 0.066 1.4E-06 44.7 14.9 118 6-128 24-149 (162)
82 PRK10456 arginine succinyltran 96.8 0.011 2.3E-07 55.7 10.2 108 5-114 1-144 (344)
83 TIGR03694 exosort_acyl putativ 96.8 0.026 5.6E-07 51.0 12.6 139 5-149 7-195 (241)
84 PF05301 Mec-17: Touch recepto 96.7 0.019 4.1E-07 45.5 9.6 74 64-140 18-94 (120)
85 PF00765 Autoind_synth: Autoin 96.7 0.031 6.6E-07 48.3 11.5 129 14-150 7-153 (182)
86 PRK13834 putative autoinducer 96.5 0.08 1.7E-06 46.7 13.3 128 14-149 15-162 (207)
87 PF13880 Acetyltransf_13: ESCO 96.3 0.0059 1.3E-07 43.9 3.7 29 90-118 6-34 (70)
88 PRK10975 TDP-fucosamine acetyl 96.0 0.035 7.6E-07 48.1 8.2 150 122-289 3-172 (194)
89 TIGR03243 arg_catab_AOST argin 95.8 0.053 1.1E-06 50.9 8.9 143 7-151 1-183 (335)
90 TIGR03245 arg_AOST_alph argini 95.8 0.062 1.3E-06 50.4 9.3 143 7-151 1-184 (336)
91 TIGR03244 arg_catab_AstA argin 95.7 0.078 1.7E-06 49.8 9.4 106 7-114 1-142 (336)
92 PRK14852 hypothetical protein; 95.4 0.41 8.9E-06 51.2 14.8 144 4-154 27-183 (989)
93 COG1243 ELP3 Histone acetyltra 94.9 0.034 7.3E-07 53.9 4.5 83 64-152 416-509 (515)
94 cd04264 DUF619-NAGS DUF619 dom 94.6 0.23 5E-06 38.3 7.8 66 58-136 11-76 (99)
95 COG3882 FkbH Predicted enzyme 94.1 0.22 4.8E-06 48.7 8.1 133 4-153 412-551 (574)
96 COG3138 AstA Arginine/ornithin 93.7 0.22 4.7E-06 45.4 6.7 105 5-111 1-141 (336)
97 PF02799 NMT_C: Myristoyl-CoA: 93.4 4.8 0.00011 34.8 15.0 130 8-149 31-162 (190)
98 cd04265 DUF619-NAGS-U DUF619 d 93.1 0.7 1.5E-05 35.7 7.9 44 88-136 33-76 (99)
99 KOG2535 RNA polymerase II elon 93.1 0.15 3.1E-06 47.7 4.7 50 99-152 497-547 (554)
100 COG3916 LasI N-acyl-L-homoseri 92.3 4.3 9.4E-05 35.5 12.5 126 14-151 14-162 (209)
101 KOG2779 N-myristoyl transferas 92.0 2.6 5.5E-05 39.8 11.3 165 56-225 135-323 (421)
102 PRK01305 arginyl-tRNA-protein 91.8 2.8 6.1E-05 37.8 11.3 76 60-149 149-224 (240)
103 PF04377 ATE_C: Arginine-tRNA- 91.8 0.8 1.7E-05 37.1 7.0 77 59-149 43-119 (128)
104 KOG3698 Hyaluronoglucosaminida 91.8 0.71 1.5E-05 46.0 7.8 146 5-152 679-878 (891)
105 KOG4601 Uncharacterized conser 91.6 0.81 1.8E-05 40.4 7.2 81 64-147 81-163 (264)
106 TIGR03019 pepcterm_femAB FemAB 91.0 4.5 9.7E-05 38.1 12.5 88 55-154 195-283 (330)
107 PF01853 MOZ_SAS: MOZ/SAS fami 90.7 1.2 2.6E-05 38.4 7.4 34 90-123 81-114 (188)
108 PF04768 DUF619: Protein of un 90.7 1.9 4.1E-05 36.8 8.6 110 16-149 33-143 (170)
109 PF13444 Acetyltransf_5: Acety 89.9 1 2.2E-05 34.7 5.9 57 55-111 30-100 (101)
110 KOG2036 Predicted P-loop ATPas 89.5 0.87 1.9E-05 46.6 6.3 33 89-121 614-646 (1011)
111 PF09390 DUF1999: Protein of u 89.3 4.7 0.0001 33.1 9.2 133 6-151 1-140 (161)
112 TIGR02382 wecD_rffC TDP-D-fuco 89.0 1.5 3.2E-05 37.8 6.9 142 133-289 8-169 (191)
113 COG2401 ABC-type ATPase fused 88.6 0.35 7.7E-06 46.8 2.8 62 89-150 241-306 (593)
114 PLN03238 probable histone acet 87.3 1.8 3.9E-05 39.7 6.5 31 92-122 158-188 (290)
115 PF13527 Acetyltransf_9: Acety 83.3 1.5 3.3E-05 34.5 3.7 95 173-282 2-111 (127)
116 PLN03239 histone acetyltransfe 82.7 3.4 7.4E-05 39.1 6.2 31 92-122 216-246 (351)
117 PF02474 NodA: Nodulation prot 82.2 3.6 7.9E-05 34.8 5.5 55 87-146 83-137 (196)
118 PRK10146 aminoalkylphosphonic 82.1 3.4 7.5E-05 33.1 5.5 107 170-289 3-122 (144)
119 PTZ00064 histone acetyltransfe 81.8 3.2 7E-05 41.0 5.8 31 92-122 387-417 (552)
120 PF09924 DUF2156: Uncharacteri 79.7 24 0.00053 32.6 10.9 109 6-129 133-245 (299)
121 PRK00756 acyltransferase NodA; 79.1 7.3 0.00016 32.8 6.3 60 87-148 83-142 (196)
122 PLN00104 MYST -like histone ac 78.0 3.2 7E-05 40.7 4.5 58 55-122 278-339 (450)
123 KOG3014 Protein involved in es 76.9 25 0.00055 31.7 9.4 32 88-119 182-213 (257)
124 cd04266 DUF619-NAGS-FABP DUF61 76.2 15 0.00033 28.8 7.0 51 87-143 37-89 (108)
125 PHA00432 internal virion prote 76.0 13 0.00027 30.5 6.7 29 123-152 93-121 (137)
126 KOG2696 Histone acetyltransfer 73.9 7.7 0.00017 36.9 5.6 45 90-136 218-263 (403)
127 PHA01733 hypothetical protein 70.8 7.4 0.00016 32.4 4.3 82 58-152 50-132 (153)
128 KOG2747 Histone acetyltransfer 69.9 7 0.00015 37.6 4.5 31 92-122 263-293 (396)
129 PRK09491 rimI ribosomal-protei 69.1 12 0.00027 30.1 5.5 104 172-289 3-109 (146)
130 TIGR03103 trio_acet_GNAT GNAT- 67.1 24 0.00052 35.9 8.1 120 164-290 76-202 (547)
131 KOG2779 N-myristoyl transferas 65.7 36 0.00079 32.3 8.1 133 7-152 262-397 (421)
132 TIGR02406 ectoine_EctA L-2,4-d 65.2 9.9 0.00021 31.5 4.2 43 250-294 75-117 (157)
133 cd03173 DUF619-like DUF619 dom 65.0 44 0.00095 25.7 7.3 50 88-143 32-81 (98)
134 PLN02706 glucosamine 6-phospha 62.9 26 0.00056 28.3 6.2 39 248-288 92-130 (150)
135 PF00583 Acetyltransf_1: Acety 61.6 7.4 0.00016 27.7 2.4 38 251-290 35-72 (83)
136 PF04339 DUF482: Protein of un 61.3 1.4E+02 0.003 28.8 11.6 126 5-153 199-330 (370)
137 COG5092 NMT1 N-myristoyl trans 61.0 57 0.0012 30.5 8.4 64 56-122 133-198 (451)
138 KOG3216 Diamine acetyltransfer 60.2 8.4 0.00018 32.1 2.7 102 170-280 3-121 (163)
139 COG5027 SAS2 Histone acetyltra 60.0 5.9 0.00013 37.3 1.9 52 54-115 233-288 (395)
140 PRK10140 putative acetyltransf 59.1 29 0.00062 28.2 5.9 42 247-290 84-126 (162)
141 PF11039 DUF2824: Protein of u 59.1 97 0.0021 25.2 10.6 111 52-184 35-146 (151)
142 PRK07922 N-acetylglutamate syn 57.3 24 0.00053 29.6 5.2 105 169-285 4-112 (169)
143 PLN02825 amino-acid N-acetyltr 56.7 32 0.0007 34.7 6.7 97 172-284 369-473 (515)
144 PF04339 DUF482: Protein of un 55.8 1.2E+02 0.0027 29.2 10.3 93 56-153 45-161 (370)
145 PRK12308 bifunctional arginino 55.2 27 0.00058 36.1 6.1 102 167-284 460-568 (614)
146 PRK10809 ribosomal-protein-S5- 54.6 35 0.00076 29.0 5.9 41 247-289 109-150 (194)
147 PRK01346 hypothetical protein; 53.4 43 0.00094 32.4 7.0 33 251-285 89-121 (411)
148 PRK02983 lysS lysyl-tRNA synth 52.9 1.6E+02 0.0035 32.7 11.8 65 56-131 421-486 (1094)
149 COG2935 Putative arginyl-tRNA: 51.0 59 0.0013 29.4 6.6 63 63-136 159-221 (253)
150 KOG3139 N-acetyltransferase [G 49.9 28 0.0006 29.3 4.2 36 251-288 94-129 (165)
151 PHA00673 acetyltransferase dom 49.5 74 0.0016 26.6 6.7 54 246-304 90-143 (154)
152 TIGR01686 FkbH FkbH-like domai 48.5 57 0.0012 30.5 6.7 103 170-286 186-300 (320)
153 PTZ00330 acetyltransferase; Pr 46.9 56 0.0012 25.9 5.7 34 249-284 90-123 (147)
154 PF13673 Acetyltransf_10: Acet 46.4 36 0.00078 25.8 4.3 30 251-283 74-103 (117)
155 COG5630 ARG2 Acetylglutamate s 44.8 66 0.0014 30.9 6.2 59 87-149 398-457 (495)
156 COG1247 Sortase and related ac 43.3 1.2E+02 0.0026 25.8 7.2 105 172-289 3-127 (169)
157 PRK03624 putative acetyltransf 43.0 84 0.0018 24.3 6.1 37 251-289 78-114 (140)
158 COG2898 Uncharacterized conser 42.4 2.9E+02 0.0063 28.1 10.8 60 60-129 398-457 (538)
159 PF11124 Pho86: Inorganic phos 40.9 2.1E+02 0.0046 26.7 8.8 88 59-151 173-270 (304)
160 COG5653 Protein involved in ce 39.5 3.7E+02 0.008 26.2 10.7 72 51-133 268-339 (406)
161 PF13420 Acetyltransf_4: Acety 38.5 41 0.00089 27.1 3.6 41 249-291 84-125 (155)
162 TIGR01575 rimI ribosomal-prote 36.9 1.9E+02 0.004 22.0 7.2 37 251-289 64-100 (131)
163 TIGR01890 N-Ac-Glu-synth amino 31.3 1E+02 0.0022 30.3 5.6 95 172-282 284-386 (429)
164 PHA02769 hypothetical protein; 31.2 53 0.0012 25.9 2.9 50 107-159 94-146 (154)
165 PRK05279 N-acetylglutamate syn 27.4 1.5E+02 0.0032 29.2 6.1 97 171-283 295-399 (441)
166 PF12953 DUF3842: Domain of un 27.3 89 0.0019 25.3 3.6 45 100-149 6-50 (131)
167 PRK07757 acetyltransferase; Pr 26.5 2.5E+02 0.0055 22.3 6.5 32 251-284 75-106 (152)
168 PF12746 GNAT_acetyltran: GNAT 23.5 2.9E+02 0.0063 25.3 6.7 93 165-276 123-221 (265)
169 PF11090 DUF2833: Protein of u 23.3 3.3E+02 0.0071 20.4 7.4 42 106-150 41-82 (86)
170 TIGR00667 aat leucyl/phenylala 22.9 5E+02 0.011 22.4 9.8 76 55-152 98-173 (185)
171 PF03588 Leu_Phe_trans: Leucyl 22.3 4.9E+02 0.011 22.2 10.8 82 46-149 89-170 (173)
172 PRK04531 acetylglutamate kinas 21.8 1.9E+02 0.004 28.2 5.4 50 89-144 310-359 (398)
173 COG3473 Maleate cis-trans isom 21.4 3.4E+02 0.0073 24.1 6.2 65 114-189 109-176 (238)
174 COG5270 PUA domain (predicted 21.2 1.3E+02 0.0027 26.0 3.6 20 55-74 163-182 (202)
175 PF11548 Receptor_IA-2: Protei 21.2 1E+02 0.0022 23.4 2.7 54 232-287 34-90 (91)
No 1
>PRK10146 aminoalkylphosphonic acid N-acetyltransferase; Provisional
Probab=99.74 E-value=3.4e-17 Score=135.62 Aligned_cols=136 Identities=19% Similarity=0.169 Sum_probs=103.7
Q ss_pred CeEEEEEcCCcchHHHHHHHHHHhccCCCCccccccccccchhHHhhcCCCceEEEEEECCeEEEEEEEEEeeccccCCC
Q 019558 4 GEVITRSYDRQIDRARVEDLERRCEVGPAERVFLFTDTLGDPICRIRNSPMYKMLVAELDRELVGVIQGSIKQVTVQKPH 83 (339)
Q Consensus 4 ~~i~IR~~~~~~D~~~v~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~VAe~~geiVG~i~~~~~~~~~~~~~ 83 (339)
+++.||+++ .+|++.+.++.......... . ....+.+......+...++++++++++||++.+.......
T Consensus 2 ~~~~ir~a~-~~D~~~l~~l~~~~~~~~~~-~----~~~~~~~~~~l~~~~~~~~v~~~~~~ivG~~~~~~~~~~~---- 71 (144)
T PRK10146 2 PACELRPAT-QYDTDAVYALICELKQAEFD-H----QAFRVGFNANLRDPNMRYHLALLDGEVVGMIGLHLQFHLH---- 71 (144)
T ss_pred CccEEeeCc-HhhHHHHHHHHHHHhcccCC-H----HHHHHHHHHHhcCCCceEEEEEECCEEEEEEEEEeccccc----
Confidence 578999999 99999999998765321111 0 1112223333445556778899999999999876532111
Q ss_pred CCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHHHHhhCCCEEee
Q 019558 84 EDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKLFVNKLGYVNFR 151 (339)
Q Consensus 84 ~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY~k~GF~~~~ 151 (339)
.....++|..++|+|+|||+|||++|++++++++++.|++.+.+.+...|..|+++ |+|+||+...
T Consensus 72 -~~~~~~~i~~l~v~p~~rg~GiG~~Ll~~~~~~a~~~~~~~i~l~~~~~n~~a~~f-Y~~~Gf~~~~ 137 (144)
T PRK10146 72 -HVNWIGEIQELVVMPQARGLNVGSKLLAWAEEEARQAGAEMTELSTNVKRHDAHRF-YLREGYEQSH 137 (144)
T ss_pred -ccchhheeheeEECHHHcCCCHHHHHHHHHHHHHHHcCCcEEEEecCCCchHHHHH-HHHcCCchhh
Confidence 11123678899999999999999999999999999999999999999999999998 9999998753
No 2
>TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase. Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species.
Probab=99.71 E-value=4.3e-16 Score=144.60 Aligned_cols=253 Identities=16% Similarity=0.092 Sum_probs=155.3
Q ss_pred EcCCcchHHHHHHHHHHhccCCCCccccccccccchhHHhhcCCCceEEEEEECCeEEEEEEEEEeeccccCCCCCCccE
Q 019558 10 SYDRQIDRARVEDLERRCEVGPAERVFLFTDTLGDPICRIRNSPMYKMLVAELDRELVGVIQGSIKQVTVQKPHEDLAKV 89 (339)
Q Consensus 10 ~~~~~~D~~~v~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~VAe~~geiVG~i~~~~~~~~~~~~~~~~~~~ 89 (339)
+++ ++|++++.+|...++......++ . ..+...+..... .....+++.+++++||++.+...... .
T Consensus 5 ~l~-~~d~~~v~~L~~~~~~~~~~~~~-~-~~~~~~~~~~~~-~~~~~~~~~~~~~~vG~~~~~~~~~~----------~ 70 (292)
T TIGR03448 5 ALD-ADLRRDVRELLAAATAVDGVAPV-S-EQVLRGLREPGA-GHTRHLVAVDSDPIVGYANLVPARGT----------D 70 (292)
T ss_pred cCC-HHHHHHHHHHHHHHHhcCCCCCC-C-HHHHhhccccCC-CCceEEEEEECCEEEEEEEEEcCCCC----------c
Confidence 466 89999999999988543221111 1 111111111111 12456788889999999976543211 1
Q ss_pred EEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHHHHhhCCCEEeecCeeeeccccc---cccc
Q 019558 90 GYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKLFVNKLGYVNFRTPAILVHPVNN---RMFH 166 (339)
Q Consensus 90 ~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY~k~GF~~~~~~~~~~~p~~~---~~~~ 166 (339)
.++..++|+|+|||+|||++|++++++.+. ..+.+.+..+|.+|++| |+++||+...+...+..++.. ....
T Consensus 71 ~~~~~l~V~p~~rg~GiG~~Ll~~~~~~~~----~~~~~~~~~~n~~a~~f-y~~~Gf~~~~~~~~~~~~l~~~~~~~~~ 145 (292)
T TIGR03448 71 PAMAELVVHPAHRRRGIGRALIRALLAKGG----GRLRVWAHGDLPAARAL-ASRLGLVPTRELLQMRRPLRDLELPEPQ 145 (292)
T ss_pred ceEEEEEECHhhcCCCHHHHHHHHHHHhcc----CceEEEEcCCCHHHHHH-HHHCCCEEccEEEEEEecCCccccCCCC
Confidence 568889999999999999999999999764 34677788899999998 999999988776555444332 2334
Q ss_pred CCCceeEeecCH-HHHHHH---HHHhccCC-CCCCCChhhhhh----ccC-CcceEEEeee-CCcccccCCCCCCC-CCc
Q 019558 167 TPSNVQIRKLRI-EEAENL---YYKFMAST-EFFPYDIGNILR----NKL-SLGTWVAYPR-GEIVGEFGSNGQIF-PKS 234 (339)
Q Consensus 167 ~~~~~~i~~l~~-~da~~l---~~~~~~~~-~~~p~d~~~~L~----~~l-~~gt~~a~~~-~~~~~~~~~~~~~~-~~~ 234 (339)
+|.+++++++.. .|...+ ....+... +..+.+.+.+.. .++ ..+.+++... ++...|+....... ...
T Consensus 146 ~~~g~~~r~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~vG~~~~~~~~~~~~ 225 (292)
T TIGR03448 146 VPDGVTVRAYVGAPDDAEWLRVNNAAFAWHPEQGGWTRADLAERRAEPWFDPAGLFLAFDDAPGELLGFHWTKVHPDEPA 225 (292)
T ss_pred CCCCeEeeccCCCcchHHHHHHHHHHhhCCCccCCcCHHHHHHHhhCcCCCcCceEEEEECCCCcEEEEEEEEecCCCCc
Confidence 678999999853 243333 22223221 111222333322 122 2345666553 34444541000000 011
Q ss_pred eEEEEEEecCcceeccCCCChHHHHHHHHHhhhhccccCCCCceEEEEeccccch
Q 019558 235 WAMVSVWNSGELFKLREGPLSGKMVRTLCQFVHNMAGTKSKDCKVIVTEVGGSDA 289 (339)
Q Consensus 235 ~a~~svw~~~~~~~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~dp 289 (339)
.+-+. .+-+.+..++..+.++|+.++.+.++ +.|+..+.+.|...++
T Consensus 226 ~~~i~------~~~V~p~~rg~GiG~~ll~~~~~~~~--~~g~~~v~l~v~~~N~ 272 (292)
T TIGR03448 226 LGEVY------VVGVDPAAQGRGLGDALTLIGLHHLA--ARGLPAVMLYVEADNE 272 (292)
T ss_pred eeEEE------EEEECHHHcCCCHHHHHHHHHHHHHH--HCCCCEEEEEEeCCCH
Confidence 11111 12244777888899999999999998 8899999999987764
No 3
>PRK01346 hypothetical protein; Provisional
Probab=99.68 E-value=1.9e-14 Score=140.10 Aligned_cols=267 Identities=13% Similarity=0.071 Sum_probs=158.9
Q ss_pred CeEEEEEcCCcchHHHHHHHHHHhccCCCCccccccccccchhHHhhcCCCceEEEEEECCeEEEEEEEEEeeccccCCC
Q 019558 4 GEVITRSYDRQIDRARVEDLERRCEVGPAERVFLFTDTLGDPICRIRNSPMYKMLVAELDRELVGVIQGSIKQVTVQKPH 83 (339)
Q Consensus 4 ~~i~IR~~~~~~D~~~v~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~VAe~~geiVG~i~~~~~~~~~~~~~ 83 (339)
+.+.||+++ .+|++++.+|...++.... .. ..+.. +... .+....++++++|++||++......... ..
T Consensus 5 ~~~~iR~~~-~~D~~~i~~L~~~~f~~~~-~~----~~~~~-~~~~--~~~~~~~va~~~~~lvg~~~~~~~~~~~--~~ 73 (411)
T PRK01346 5 MAITIRTAT-EEDWPAWFRAAATGFGDSP-SD----EELEA-WRAL--VEPDRTLGAFDGDEVVGTAGAFDLRLTV--PG 73 (411)
T ss_pred CCceeecCC-HHHHHHHHHHHHHHcCCCC-Ch----HHHHH-HHHh--cCcCCeEEEEECCEEEEEEEEecccccc--CC
Confidence 568999999 9999999999999874321 11 11111 1111 1224568889999999999875443222 11
Q ss_pred CCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHHHHhhCCCEEeecCeeeeccccc-
Q 019558 84 EDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKLFVNKLGYVNFRTPAILVHPVNN- 162 (339)
Q Consensus 84 ~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY~k~GF~~~~~~~~~~~p~~~- 162 (339)
....+.++|..++|+|+|||+|||++||+++++.++++|+..+.+.+.. . . ||+|+||........+..+...
T Consensus 74 ~~~~~~~~i~~v~V~P~~RgrGig~~Ll~~~l~~a~~~g~~~~~L~~~~--~---~-~Y~r~Gf~~~~~~~~~~i~~~~~ 147 (411)
T PRK01346 74 GAVLPAAGVTAVTVAPTHRRRGLLTALMREQLRRIRERGEPVAALTASE--G---G-IYGRFGYGPATYSQSLSVDRRRA 147 (411)
T ss_pred CCccceeEEEEEEEChhhcCCCHHHHHHHHHHHHHHHCCCcEEEEECCc--h---h-hHhhCCCeeccceEEEEEccccc
Confidence 1223568999999999999999999999999999999999888776433 2 3 5999999998876555443321
Q ss_pred -ccccCCCceeEeecCHH----HHHHHHHHhccC-CCCCCCChh---hhhhccC-C-c---ceEEEeeeCCcccccCCCC
Q 019558 163 -RMFHTPSNVQIRKLRIE----EAENLYYKFMAS-TEFFPYDIG---NILRNKL-S-L---GTWVAYPRGEIVGEFGSNG 228 (339)
Q Consensus 163 -~~~~~~~~~~i~~l~~~----da~~l~~~~~~~-~~~~p~d~~---~~L~~~l-~-~---gt~~a~~~~~~~~~~~~~~ 228 (339)
.....+..-.++..+.+ ....+|.+.+.. ....+.+-. ..+.... . . +.++++..++
T Consensus 148 ~~~~~~~~~~~v~~~~~~~~~~~l~~~y~~~~~~~~G~~~R~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~--------- 218 (411)
T PRK01346 148 RLRPDVPDGGRVRLVDPAEARDLLPAVYERWRRARPGALSRPPAWWDDVLADRESRRGGGSPLRALVHPDD--------- 218 (411)
T ss_pred ccCCCCCCCCceEEcCHHHHHHHHHHHHHHhhccCCCcccCChHHHHHHhcCcccccCCCCccEEEEEcCC---------
Confidence 11111221234444443 334566655554 233333322 2222211 1 1 2555554322
Q ss_pred CCCCCceEEEEEEecC------cceeccC-CCChHHHHHHHHHhhhhccccCCCCceEEEE-eccccchhccCCCcCCCC
Q 019558 229 QIFPKSWAMVSVWNSG------ELFKLRE-GPLSGKMVRTLCQFVHNMAGTKSKDCKVIVT-EVGGSDALRLHIPHWKLL 300 (339)
Q Consensus 229 ~~~~~~~a~~svw~~~------~~~~l~~-~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~dp~~~~~p~~~~~ 300 (339)
+.+.+|++.++=+.. ..+.+++ -...+.-.++|++|.-+... |.-|.. .+..+||+...+|--+..
T Consensus 219 -g~~~Gy~~y~~~~~~~~~~~~~~l~V~e~~~~~~~a~~~L~~fl~~~~~-----~~~v~~~~~p~dd~l~~~l~d~~~~ 292 (411)
T PRK01346 219 -GEVDGYALYRVDDTWGFRGPDGTVEVEELVAATPAAYAALWRFLLSLDL-----VERVRAGIAPPDDPLPHLLADPRAA 292 (411)
T ss_pred -CcccEEEEEEEcCcccccCCCceEEEEEEEeCCHHHHHHHHHHHhhCcC-----eeEEEECCCCCCcchHhhcCCcccc
Confidence 124577777762211 1344441 11123444555555544422 445554 788999998888777655
Q ss_pred CC
Q 019558 301 SC 302 (339)
Q Consensus 301 ~~ 302 (339)
++
T Consensus 293 ~~ 294 (411)
T PRK01346 293 RT 294 (411)
T ss_pred ee
Confidence 54
No 4
>PHA00673 acetyltransferase domain containing protein
Probab=99.68 E-value=1.3e-15 Score=126.59 Aligned_cols=133 Identities=18% Similarity=0.125 Sum_probs=101.9
Q ss_pred cCCcchHHHHHHHHHHhccCCCCcccccc-ccccchhHHhhcCCCceEEEEEECCeEEEEEEEEEeeccccCCCCCCccE
Q 019558 11 YDRQIDRARVEDLERRCEVGPAERVFLFT-DTLGDPICRIRNSPMYKMLVAELDRELVGVIQGSIKQVTVQKPHEDLAKV 89 (339)
Q Consensus 11 ~~~~~D~~~v~~L~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~VAe~~geiVG~i~~~~~~~~~~~~~~~~~~~ 89 (339)
++ .+|++++.+|..+...+.. .+.... ......+..+..+|+..++|++++|++||++.+.+.+... ....+.
T Consensus 12 A~-~~D~paI~~LLadd~l~~~-r~d~~~~~~y~~af~ai~~dp~~~llVa~~~g~vVG~~~l~~~p~l~----~~~~~~ 85 (154)
T PHA00673 12 AE-LADAPTFASLCAEYAHESA-NADLAGRAPDHHAYAGMEAAGVAHFLGVFRGEELVGFACLLVTPVPH----FKGQLI 85 (154)
T ss_pred cc-HhhHHHHHHHHHhcccccc-cccccccchhHHHHHHHHhCCCcEEEEEEECCEEEEEEEEEEecCCc----cCCccE
Confidence 56 8999999999887422221 111111 1222337788889999999999999999999998877332 223466
Q ss_pred EEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccC-ChHHHHHHHhhCCCEEeec
Q 019558 90 GYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKD-NEASVKLFVNKLGYVNFRT 152 (339)
Q Consensus 90 ~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~-N~~a~~lfY~k~GF~~~~~ 152 (339)
+.|..++|+|++||+|||++|+++++++++++|+..++++..++ |. +.| |.++|++...+
T Consensus 86 ~~Ie~l~V~~~~RGqGIG~~Ll~~A~~~Ar~~Gc~~lyis~~p~~~t--v~f-y~~~g~~~~~~ 146 (154)
T PHA00673 86 GTTESIFVAAAHRPGGAGMALLRATEALARDLGATGLYVSGPTEGRL--VQL-LPAAGYRETNR 146 (154)
T ss_pred EEEEEEEEChhccCCCHHHHHHHHHHHHHHHCCCCEEEEecCCCccc--hHH-HHhCCchhhch
Confidence 89999999999999999999999999999999999999986553 43 465 99999987544
No 5
>PRK03624 putative acetyltransferase; Provisional
Probab=99.68 E-value=1e-15 Score=125.23 Aligned_cols=129 Identities=29% Similarity=0.407 Sum_probs=99.7
Q ss_pred eEEEEEcCCcchHHHHHHHHHHhccCCCCccccccccccchhHHhhcCCCceEEEEEECCeEEEEEEEEEeeccccCCCC
Q 019558 5 EVITRSYDRQIDRARVEDLERRCEVGPAERVFLFTDTLGDPICRIRNSPMYKMLVAELDRELVGVIQGSIKQVTVQKPHE 84 (339)
Q Consensus 5 ~i~IR~~~~~~D~~~v~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~VAe~~geiVG~i~~~~~~~~~~~~~~ 84 (339)
++.||+++ .+|.+++.+++..+..... + .+. ...+......+...++++.+++++||++.+....
T Consensus 2 ~~~ir~~~-~~d~~~i~~l~~~~~~~~~---~--~~~-~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~-------- 66 (140)
T PRK03624 2 AMEIRVFR-QADFEAVIALWERCDLTRP---W--NDP-EMDIERKLNHDPSLFLVAEVGGEVVGTVMGGYDG-------- 66 (140)
T ss_pred ceEEEEcc-cccHHHHHHHHHhcCCCcc---h--hhH-HHHHHHHhcCCCceEEEEEcCCcEEEEEEeeccC--------
Confidence 58899999 9999999999888632111 0 000 1122233334446788898899999998654211
Q ss_pred CCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHHHHhhCCCEEeec
Q 019558 85 DLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKLFVNKLGYVNFRT 152 (339)
Q Consensus 85 ~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY~k~GF~~~~~ 152 (339)
..+++..+.|+|+|||+|||++|++.+++++++.|++.+.+.+...|..++++ |+|+||+...+
T Consensus 67 ---~~~~i~~i~v~p~~rg~Gig~~ll~~~~~~~~~~~~~~~~~~~~~~N~~~~~~-y~k~GF~~~~~ 130 (140)
T PRK03624 67 ---HRGWAYYLAVHPDFRGRGIGRALVARLEKKLIARGCPKINLQVREDNDAVLGF-YEALGYEEQDR 130 (140)
T ss_pred ---CCceEEEEEECHHHhCCCHHHHHHHHHHHHHHHCCCCEEEEEEecCcHHHHHH-HHHcCCccccE
Confidence 12567788999999999999999999999999999999999999999999998 99999997554
No 6
>PF13527 Acetyltransf_9: Acetyltransferase (GNAT) domain; PDB: 3SXN_C 2I00_D 1M4D_B 1M44_A 1M4G_B 1M4I_A 2OZG_A 2HV2_F 3N7Z_A 3RYO_B ....
Probab=99.66 E-value=2.4e-15 Score=121.95 Aligned_cols=126 Identities=20% Similarity=0.263 Sum_probs=92.2
Q ss_pred EEEEcCCcchHHHHHHHHHHhccCCCCccccccccccchhHHhhcCCCceEEEEEECCeEEEEEEEEEeeccccCCCCCC
Q 019558 7 ITRSYDRQIDRARVEDLERRCEVGPAERVFLFTDTLGDPICRIRNSPMYKMLVAELDRELVGVIQGSIKQVTVQKPHEDL 86 (339)
Q Consensus 7 ~IR~~~~~~D~~~v~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~VAe~~geiVG~i~~~~~~~~~~~~~~~~ 86 (339)
.||+++ ++|.+++.+|...++....... ... ........+ ..+++++++|+|||++.+....... ....
T Consensus 1 ~iR~~~-~~d~~~i~~l~~~~F~~~~~~~-----~~~-~~~~~~~~~-~~~~~~~~~~~ivg~~~~~~~~~~~---~g~~ 69 (127)
T PF13527_consen 1 EIRPLT-ESDFEQIIELFNEAFGDSESPP-----EIW-EYFRNLYGP-GRCVVAEDDGKIVGHVGLIPRRLSV---GGKK 69 (127)
T ss_dssp -EEEE--GGGHHHHHHHHHHHTTT-CHHH-----HHH-HHHHHHHHT-TEEEEEEETTEEEEEEEEEEEEEEE---TTEE
T ss_pred CceECC-HHHHHHHHHHHHHHCCCCCCch-----hhh-hhhhcccCc-CcEEEEEECCEEEEEEEEEEEEEEE---CCEE
Confidence 489999 9999999999999985443321 000 011111123 5789999999999999987776544 1234
Q ss_pred ccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHHHHhhCCCEE
Q 019558 87 AKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKLFVNKLGYVN 149 (339)
Q Consensus 87 ~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY~k~GF~~ 149 (339)
.+.+++..++|+|+|||+|+|++|++++++.++++|+..+.+.. .+.. ||+|+||+.
T Consensus 70 ~~~~~i~~v~v~p~~R~~Gl~~~L~~~~~~~~~~~g~~~~~l~~--~~~~----~Y~~~G~~~ 126 (127)
T PF13527_consen 70 FKAAYIGDVAVDPEYRGRGLGRQLMRALLERARERGVPFIFLFP--SSPP----FYRRFGFEY 126 (127)
T ss_dssp EEEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHHHTT-SEEEEE---SSHH----HHHHTTEEE
T ss_pred EEEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCCCEEEEec--CChh----hhhcCCCEE
Confidence 46799999999999999999999999999999999998887755 3444 699999986
No 7
>PTZ00330 acetyltransferase; Provisional
Probab=99.65 E-value=5.5e-15 Score=122.73 Aligned_cols=136 Identities=21% Similarity=0.253 Sum_probs=95.4
Q ss_pred CeEEEEEcCCcchHHHHHHHHHHhccCCCCccccccccccchhHHhh-cCCCceEEEEEECCeEEEEEEEEEeeccccCC
Q 019558 4 GEVITRSYDRQIDRARVEDLERRCEVGPAERVFLFTDTLGDPICRIR-NSPMYKMLVAELDRELVGVIQGSIKQVTVQKP 82 (339)
Q Consensus 4 ~~i~IR~~~~~~D~~~v~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~VAe~~geiVG~i~~~~~~~~~~~~ 82 (339)
..+.||+++ ++|.+++.++.+.....+.. ....+...+.... .......+++.++|++||++.+.......
T Consensus 5 ~~~~ir~~~-~~D~~~i~~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~--- 76 (147)
T PTZ00330 5 GSLELRDLE-EGDLGSVLELLSHLTSAPAL----SQEELEQIAARRRLAGVVTRVFVHSPTQRIVGTASLFVEPKFT--- 76 (147)
T ss_pred ceEEEEEcc-cccHHHHHHHHHHhcCCCcc----chhHHHHHHHHHhcCCCceEEEEEeCCCEEEEEEEEEeccccc---
Confidence 358999999 99999999998876432211 1111111111111 11223456667789999999876433111
Q ss_pred CCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHHHHhhCCCEEeec
Q 019558 83 HEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKLFVNKLGYVNFRT 152 (339)
Q Consensus 83 ~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY~k~GF~~~~~ 152 (339)
......++|..+.|+|+|||+|||++|++++++++++.++..+.+.+ |.+|+++ |+|+||+....
T Consensus 77 -~~~~~~~~i~~~~V~~~~rg~Gig~~l~~~~~~~a~~~~~~~l~l~~---n~~a~~~-y~k~GF~~~~~ 141 (147)
T PTZ00330 77 -RGGKCVGHIEDVVVDPSYRGQGLGRALISDLCEIARSSGCYKVILDC---TEDMVAF-YKKLGFRACER 141 (147)
T ss_pred -cCCCceEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEec---ChHHHHH-HHHCCCEEece
Confidence 11123478999999999999999999999999999999988776654 7888898 99999998653
No 8
>PRK10140 putative acetyltransferase YhhY; Provisional
Probab=99.64 E-value=1e-14 Score=122.94 Aligned_cols=138 Identities=22% Similarity=0.254 Sum_probs=99.8
Q ss_pred CeEEEEEcCCcchHHHHHHHHHHhccCCCC--ccccccccccchhHHhhcCCCceEEEEEECCeEEEEEEEEEeeccccC
Q 019558 4 GEVITRSYDRQIDRARVEDLERRCEVGPAE--RVFLFTDTLGDPICRIRNSPMYKMLVAELDRELVGVIQGSIKQVTVQK 81 (339)
Q Consensus 4 ~~i~IR~~~~~~D~~~v~~L~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~VAe~~geiVG~i~~~~~~~~~~~ 81 (339)
..+.||+++ .+|++.+.++.......... .+....+. ....+...+...+++++++|++||++.+......
T Consensus 2 ~~i~lr~~~-~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~--- 74 (162)
T PRK10140 2 SEIVIRHAE-TRDYEAIRQIHAQPEVYHNTLQVPHPSDHM---WQERLADRPGIKQLVACIDGDVVGHLTIDVQQRP--- 74 (162)
T ss_pred CccEEEecc-hhhHHHHHHHHhCcccccccccCCCcCHHH---HHHHhhcCCCcEEEEEEECCEEEEEEEEeccccc---
Confidence 468999999 99999999998754221110 01111111 1122233344567888889999999988643211
Q ss_pred CCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHh-CCCcEEEEEeccCChHHHHHHHhhCCCEEeecC
Q 019558 82 PHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTS-NDVDYAYMATEKDNEASVKLFVNKLGYVNFRTP 153 (339)
Q Consensus 82 ~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~-~g~~~i~l~v~~~N~~a~~lfY~k~GF~~~~~~ 153 (339)
.....+. .+++|+|+|||+|||++|++.+++++++ .++..+.+.+...|.+|+++ |+|+||+..+..
T Consensus 75 ---~~~~~~~-~~~~v~p~~rg~Gig~~ll~~l~~~~~~~~~~~~i~l~v~~~N~~a~~~-y~k~GF~~~g~~ 142 (162)
T PRK10140 75 ---RRSHVAD-FGICVDSRWKNRGVASALMREMIEMCDNWLRVDRIELTVFVDNAPAIKV-YKKYGFEIEGTG 142 (162)
T ss_pred ---ccceEEE-EEEEECHHHcCCCHHHHHHHHHHHHHHhhCCccEEEEEEEcCCHHHHHH-HHHCCCEEEeec
Confidence 0111232 3589999999999999999999999998 69999999999999999999 999999988774
No 9
>KOG3216 consensus Diamine acetyltransferase [Amino acid transport and metabolism]
Probab=99.64 E-value=6.1e-15 Score=119.62 Aligned_cols=137 Identities=19% Similarity=0.139 Sum_probs=104.1
Q ss_pred CeEEEEEcCCcchHHHHHHHHHHhcc--CCCCccccccccccchhHH--hhcCCCceEEEEEE---CCeEEEEEEEEEee
Q 019558 4 GEVITRSYDRQIDRARVEDLERRCEV--GPAERVFLFTDTLGDPICR--IRNSPMYKMLVAEL---DRELVGVIQGSIKQ 76 (339)
Q Consensus 4 ~~i~IR~~~~~~D~~~v~~L~~~~~~--~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~VAe~---~geiVG~i~~~~~~ 76 (339)
..++||.++ ++|.+++.+|+++... ......... ...+.+ ....|-..++++.. +++++|++.....-
T Consensus 2 ~~~~IR~at-~~D~~~i~rLikela~Fek~~~~v~~t----e~~l~~~~F~d~~~~~~~v~~ie~~~~~~aGf~~yf~~y 76 (163)
T KOG3216|consen 2 DNIRIRLAT-PKDCEDILRLIKELAEFEKLEDQVEAT----EENLARDGFIDPPFKHWLVAAIETSGEVVAGFALYFNNY 76 (163)
T ss_pred CceEEEecC-cccHHHHHHHHHHHHHHHHhccchhhc----hhhhhhhhccCCCccEEEEEEEecCCCceeEEeeeeccc
Confidence 568999999 9999999999988621 111111111 111222 23335466777766 68999999664322
Q ss_pred ccccCCCCCCc-cEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHHHHhhCCCEEeec
Q 019558 77 VTVQKPHEDLA-KVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKLFVNKLGYVNFRT 152 (339)
Q Consensus 77 ~~~~~~~~~~~-~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY~k~GF~~~~~ 152 (339)
.+... ...|+..+.|.|+|||+|+|+.|++.+-+.|.+.|+..+++.|...|..|+.+ |+|.|++....
T Consensus 77 ------stW~~k~~iYleDlyV~e~yR~kG~Gs~Ll~~va~~A~~~G~~rv~w~vldwN~rAi~l-Y~k~gaq~l~~ 146 (163)
T KOG3216|consen 77 ------STWLGKQGIYLEDLYVREQYRGKGIGSKLLKFVAEEADKLGTPRVEWVVLDWNHRAILL-YEKVGAQDLKE 146 (163)
T ss_pred ------ccccccceEEEEeeEecchhcccChHHHHHHHHHHHHHHcCCCcEEEEEeccchhHHHH-HHHhCccccce
Confidence 23333 56899999999999999999999999999999999999999999999999999 99999997554
No 10
>TIGR02382 wecD_rffC TDP-D-fucosamine acetyltransferase. This model represents the WecD protein (Formerly RffC) for the biosynthesis of enterobacterial common antigen (ECA), an outer leaflet, outer membrane glycolipid with a trisaccharide repeat unit. WecD is a member of the GNAT family of acetytransferases (pfam00583).
Probab=99.63 E-value=5.5e-15 Score=128.93 Aligned_cols=137 Identities=15% Similarity=0.103 Sum_probs=98.6
Q ss_pred eEEEEEcCCcchHHHHHHHHHHhccCCCCc-cccccc----cccchhHHhhc-CCCce-EEEEEECCeEEEEEEEEEeec
Q 019558 5 EVITRSYDRQIDRARVEDLERRCEVGPAER-VFLFTD----TLGDPICRIRN-SPMYK-MLVAELDRELVGVIQGSIKQV 77 (339)
Q Consensus 5 ~i~IR~~~~~~D~~~v~~L~~~~~~~~~~~-~~~~~~----~~~~~l~~~~~-~~~~~-~~VAe~~geiVG~i~~~~~~~ 77 (339)
.+.||+++ .+|.+.+.++...++...... ++...+ .+...+..... ..... +++++.+|++||++.+.....
T Consensus 43 ~~~lR~~~-~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~iiG~i~l~~~~~ 121 (191)
T TIGR02382 43 DPGARVAT-ETDIPALRQLASAAFALSRFRAPWYAPDDSGRFYAQWVENAVRGTFDHQCLILRDASGDPRGYVTLRELND 121 (191)
T ss_pred CCcceeCC-hhhHHHHHHHHHHHhhccccCCCCcCHHHHHHHHHHHHHHHhcCCCCCeEEEEEccCCeEEEEEEEEecCC
Confidence 36899999 999999999998874211111 111000 11111222221 21223 344566789999997754321
Q ss_pred cccCCCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHHHHhhCCCEEeecC
Q 019558 78 TVQKPHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKLFVNKLGYVNFRTP 153 (339)
Q Consensus 78 ~~~~~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY~k~GF~~~~~~ 153 (339)
..+++..++|+|+|||+|||++|++.+++++++.|+..+.+.|..+|..|+++ |+|+||+..+..
T Consensus 122 ----------~~~~i~~l~V~p~~rGkG~G~~ll~~~~~~a~~~g~~~I~l~v~~~N~~A~~~-Y~klGF~~~~~~ 186 (191)
T TIGR02382 122 ----------TDARIGLLAVFPGAQSRGIGAELMQTALNWCYARGLTRLRVATQMGNTAALRL-YIRSGANIESTA 186 (191)
T ss_pred ----------CceEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHH-HHHcCCccccce
Confidence 12678888999999999999999999999999999999999999999999998 999999976653
No 11
>KOG3139 consensus N-acetyltransferase [General function prediction only]
Probab=99.63 E-value=1.3e-14 Score=119.11 Aligned_cols=137 Identities=20% Similarity=0.164 Sum_probs=96.7
Q ss_pred EEEEEcCCcchHHHHHHHHHHhccCCCCccccccccccchhHHhh-cCCCceEEEEEECCe-EEEEEEEEEeeccccCCC
Q 019558 6 VITRSYDRQIDRARVEDLERRCEVGPAERVFLFTDTLGDPICRIR-NSPMYKMLVAELDRE-LVGVIQGSIKQVTVQKPH 83 (339)
Q Consensus 6 i~IR~~~~~~D~~~v~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~VAe~~ge-iVG~i~~~~~~~~~~~~~ 83 (339)
..|+... ..+...+..+.+......+...+ ....++. ..-+..+++|.+++. .||.+.+.... +
T Consensus 14 ~~i~~~~-~~~~~~l~~im~Li~k~lsepyS-------~~tyrYf~~~wp~~~~~a~d~~~~~VGai~ck~~~------~ 79 (165)
T KOG3139|consen 14 EVIRPSL-YPAEEYLADIMRLIDKDLSEPYS-------IYTYRYFVPNWPCFCFLALDEKGDTVGAIVCKLDT------H 79 (165)
T ss_pred eeeeeec-chHHHHHHHHHHHHhhhcCchhH-------HHHHHhcccCCceEEEEEEcCCCceEEEEEEeccc------c
Confidence 4566665 44444444454444333322222 2222221 122257778877644 69988664322 1
Q ss_pred CCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHHHHhhCCCEEeecCeeeec
Q 019558 84 EDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKLFVNKLGYVNFRTPAILVH 158 (339)
Q Consensus 84 ~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY~k~GF~~~~~~~~~~~ 158 (339)
.. ...++|..++|+++|||+|||++|++.+++.++.+|+..+.|.|...|.+|++| |+++||...+....++.
T Consensus 80 r~-~~rgyi~mLaV~~e~Rg~GIg~aLvr~aId~m~~~g~~eVvLeTe~~n~~A~~L-Y~sLGF~r~~r~~~YYl 152 (165)
T KOG3139|consen 80 RN-TLRGYIAMLAVDSEYRGQGIGKALVRKAIDAMRSRGYSEVVLETEVTNLSALRL-YESLGFKRDKRLFRYYL 152 (165)
T ss_pred CC-cceEEEEEEEechhhccccHHHHHHHHHHHHHHHCCCcEEEEeccccchHHHHH-HHhcCceEecceeEEEE
Confidence 22 356999999999999999999999999999999999999999999999999999 99999999777655543
No 12
>PLN02706 glucosamine 6-phosphate N-acetyltransferase
Probab=99.62 E-value=1.5e-14 Score=120.77 Aligned_cols=136 Identities=18% Similarity=0.207 Sum_probs=97.6
Q ss_pred CeEEEEEcCCcchHH-HHHHHHHHhccCCCCccccccccccchhHHhhc-CCCceEEEEEE--CCeEEEEEEEEEeeccc
Q 019558 4 GEVITRSYDRQIDRA-RVEDLERRCEVGPAERVFLFTDTLGDPICRIRN-SPMYKMLVAEL--DRELVGVIQGSIKQVTV 79 (339)
Q Consensus 4 ~~i~IR~~~~~~D~~-~v~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~VAe~--~geiVG~i~~~~~~~~~ 79 (339)
..+.||+++ .+|.+ .+.+++....... ....+.+...+..... ......+++++ ++++||++.+.+.....
T Consensus 5 ~~~~ir~~~-~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~ 79 (150)
T PLN02706 5 EKFKVRRLE-ISDKSKGFLELLQQLTVVG----DVTEEEFEARFQELASLGDDHLICVIEDAASGRIIATGSVFVERKFI 79 (150)
T ss_pred CceEEeEhh-hcccchHHHHHHHhccCCC----CCCHHHHHHHHHHHHhCCCcEEEEEEEeCCCCcEEEEEEEEEEeecc
Confidence 568999999 99987 5888876642211 1112223333444333 22345667776 68999998775432111
Q ss_pred cCCCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHHHHhhCCCEEeec
Q 019558 80 QKPHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKLFVNKLGYVNFRT 152 (339)
Q Consensus 80 ~~~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY~k~GF~~~~~ 152 (339)
......++|..++|+|+|||+|||++|++.+++++++.|++.+.+.+...|.+ ||+|+||+..+.
T Consensus 80 ----~~~~~~~~i~~i~V~~~~rg~GiG~~ll~~~~~~a~~~g~~~i~l~~~~~N~~----~y~k~GF~~~g~ 144 (150)
T PLN02706 80 ----RNCGKVGHIEDVVVDSAARGKGLGKKIIEALTEHARSAGCYKVILDCSEENKA----FYEKCGYVRKEI 144 (150)
T ss_pred ----cCCCcEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEeccccHH----HHHHCcCEEehh
Confidence 11234578888999999999999999999999999999999999999999964 599999998653
No 13
>PF00583 Acetyltransf_1: Acetyltransferase (GNAT) family; InterPro: IPR000182 The N-acetyltransferases (NAT) (EC 2.3.1.-) are enzymes that use acetyl coenzyme A (CoA) to transfer an acetyl group to a substrate, a reaction implicated in various functions from bacterial antibiotic resistance to mammalian circadian rhythm and chromatin remodeling. The Gcn5-related N-acetyltransferases (GNAT) catalyze the transfer of the acetyl from the CoA donor to a primary amine of the acceptor. The GNAT proteins share a domain composed of four conserved sequence motifs A-D [, ]. This GNAT domain is named after yeast GCN5 (from General Control Nonrepressed) and related histone acetyltransferases (HATs) like Hat1 and PCAF. HATs acetylate lysine residues of amino terminal histone tails, resulting in transcription activation. Another category of GNAT, the aminoglycoside N-acetyltransferases, confer antibiotic resistance by catalyzing the acetylation of amino groups in aminoglycoside antibiotics []. GNAT proteins can also have anabolic and catabolic functions in both prokaryotes and eukaryotes [, , , , ]. The acetyltransferase/GNAT domain forms a structurally conserved fold of 6 to 7 beta strands (B) and 4 helices (H) in the topology B1-H1-H2-B2-B3-B4-H3-B5-H4-B6, followed by a C-terminal strand which may be from the same monomer or contributed by another [, ]. Motifs D (B2-B3), A (B4-H3) and B (B5-H4) are collectively called the HAT core [, , ], while the N-terminal motif C (B1-H1) is less conserved. Some proteins known to contain a GNAT domain: Yeast GCN5 and Hat1, which are histone acetyltransferases (EC 2.3.1.48). Human PCAF, a histone acetyltransferase. Mammalian serotonin N-acetyltransferase (SNAT) or arylalkylamine NAT (AANAT), which acetylates serotonin into a circadian neurohormone that may participate in light-dark rhythms, and human mood and behavior. Mammalian glucosamine 6-phosphate N-acetyltransferase (GNA1) (EC 2.3.1.4). Escherichia coli rimI and rimJ, which acetylate the N-terminal alanine of ribosomal proteins S18 and S5, respectively (EC 2.3.1.128). Mycobacterium tuberculosis aminoglycoside 2'-N-acetyltransferase (aac), which acetylates the 2' hydroxyl or amino group of a broad spectrum of aminoglycoside antibiotics. Bacillus subtilis bltD and paiA, which acetylate spermine and spermidine. This entry represents the entire GNAT domain.; GO: 0008080 N-acetyltransferase activity, 0008152 metabolic process; PDB: 3T9Y_A 2R7H_B 2OZH_A 1Y9W_B 1VKC_B 2OH1_C 3R9E_B 3R9G_B 3R9F_A 3R96_A ....
Probab=99.61 E-value=1.4e-14 Score=108.19 Aligned_cols=83 Identities=31% Similarity=0.478 Sum_probs=74.9
Q ss_pred EEECCeEEEEEEEEEeeccccCCCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHH
Q 019558 60 AELDRELVGVIQGSIKQVTVQKPHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVK 139 (339)
Q Consensus 60 Ae~~geiVG~i~~~~~~~~~~~~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~ 139 (339)
|+++|++||++.+....... .....++|..+.|+|+|||+|||+.|++++++++++.|+..+.+.+..+|.++++
T Consensus 1 ~~~~~~ivg~~~~~~~~~~~-----~~~~~~~i~~~~v~~~~r~~Gig~~L~~~~~~~~~~~g~~~i~~~~~~~n~~~~~ 75 (83)
T PF00583_consen 1 AEEDGQIVGFASLRPPPEPF-----DHGNHAYIHRLAVDPEYRGQGIGSKLLQAAEEWARKRGIKRIYLDVSPDNPAARR 75 (83)
T ss_dssp EEETTEEEEEEEEEEEETTT-----TTTTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTESEEEEEEETTGHHHHH
T ss_pred CcCCCEEEEEEEEEECCCcc-----ccCCEEEEEEEEEcHHHhhCCCchhhhhhhhhhHHhcCccEEEEEEeCCCHHHHH
Confidence 68899999999998776432 1146799999999999999999999999999999999999999999999999999
Q ss_pred HHHhhCCCE
Q 019558 140 LFVNKLGYV 148 (339)
Q Consensus 140 lfY~k~GF~ 148 (339)
+ |+|+||+
T Consensus 76 ~-~~k~Gf~ 83 (83)
T PF00583_consen 76 F-YEKLGFE 83 (83)
T ss_dssp H-HHHTTEE
T ss_pred H-HHHcCCC
Confidence 8 9999996
No 14
>TIGR02406 ectoine_EctA L-2,4-diaminobutyric acid acetyltransferase. This enzyme family is the EctA of ectoine biosynthesis. Ectoine is a compatible solute, analagous to trehalose, betaines, etc., found often in halotolerant organisms. EctA is L-2,4-diaminobutyric acid acetyltransferase, also called DABA acetyltransferase.
Probab=99.60 E-value=1.3e-14 Score=122.74 Aligned_cols=124 Identities=23% Similarity=0.227 Sum_probs=93.4
Q ss_pred EEEcCCcchHHHHHHHHHHhccCCCCccccccccccchhHHhhcCCCceEEEEE-ECCeEEEEEEEEEeeccccCCCCCC
Q 019558 8 TRSYDRQIDRARVEDLERRCEVGPAERVFLFTDTLGDPICRIRNSPMYKMLVAE-LDRELVGVIQGSIKQVTVQKPHEDL 86 (339)
Q Consensus 8 IR~~~~~~D~~~v~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~VAe-~~geiVG~i~~~~~~~~~~~~~~~~ 86 (339)
||+++ .+|++++.+|+..+....... . ..... .........++++ .+|++||++.+..... .
T Consensus 1 IR~~~-~~D~~~i~~L~~~~~~~~~~~------~-~~~~~-~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~--------~ 63 (157)
T TIGR02406 1 FRPPR-IEDGAGIWELVKDCPPLDLNS------S-YAYLL-LCTDFADTSIVAESEGGEIVGFVSGYLRPD--------R 63 (157)
T ss_pred CCCCc-cccHHHHHHHHHhCCCCCccc------c-eehhh-hhhhcCCcEEEEEcCCCeEEEEEEEEecCC--------C
Confidence 68899 999999999998864211110 0 00111 1111224566777 4689999986643221 1
Q ss_pred ccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHHHHhhCCCEE
Q 019558 87 AKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKLFVNKLGYVN 149 (339)
Q Consensus 87 ~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY~k~GF~~ 149 (339)
....++..++|+|+|||+|||++|++.++++++..++..+.+.|..+|.+|+++ |+|+||+.
T Consensus 64 ~~~~~i~~l~V~p~~rg~GiG~~L~~~l~~~a~~~~~~~i~~~v~~~N~~a~~l-y~k~G~~~ 125 (157)
T TIGR02406 64 PDVLFVWQVAVDPRARGKGLARRLLEALLERVACERVRHLETTITPDNQASRAL-FKALARRR 125 (157)
T ss_pred CCeEEEEEEEEChHhccCcHHHHHHHHHHHHHHhCCCCEEEEEEcCCCHHHHHH-HHHhCccc
Confidence 234788899999999999999999999999999999999999999999999999 99999986
No 15
>PF13523 Acetyltransf_8: Acetyltransferase (GNAT) domain; PDB: 2VQY_A 2BUE_A 1V0C_A 1YK3_D 2PR8_A 2QIR_A 2PRB_A 2QML_A 2PC1_A.
Probab=99.59 E-value=3.8e-14 Score=118.74 Aligned_cols=144 Identities=17% Similarity=0.125 Sum_probs=97.4
Q ss_pred EEEcCCcchHHHHHHHHHHhccCCCCccccccccccchhHHhhcCCCceEEEEEECCeEEEEEEEEEeeccccCCCCCCc
Q 019558 8 TRSYDRQIDRARVEDLERRCEVGPAERVFLFTDTLGDPICRIRNSPMYKMLVAELDRELVGVIQGSIKQVTVQKPHEDLA 87 (339)
Q Consensus 8 IR~~~~~~D~~~v~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~VAe~~geiVG~i~~~~~~~~~~~~~~~~~ 87 (339)
||+++..+|++.+.+|.++......................+...+....+|++.+|+++|++.+...... .....
T Consensus 1 ~R~a~~~~Dl~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~dg~~~g~~~~~~~~~~----~~~~~ 76 (152)
T PF13523_consen 1 LRPATTPDDLPLILQWLNQPHVREFWDQDPSQEWVEEYPEQLEADPGHHPYVAEDDGEPIGYFEIYWPDED----YDADD 76 (152)
T ss_dssp EEE---GGGHHHHHHHHTSHHHHCCH-CCCTHHHHHHHHHHHCHTTTEEEEEEEETTEEEEEEEEEEGGGS----S---T
T ss_pred CeeCccHHHHHHHHHHHHhHHHHHHccCCCCHHHHHHHHhhhcccCCceEEEEEECCEEEEEEEEeccccc----ccCCC
Confidence 57776689999999998776221111000000111111222224666889999999999999966432211 11123
Q ss_pred cEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhC-CCcEEEEEeccCChHHHHHHHhhCCCEEeecCeee
Q 019558 88 KVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSN-DVDYAYMATEKDNEASVKLFVNKLGYVNFRTPAIL 156 (339)
Q Consensus 88 ~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~-g~~~i~l~v~~~N~~a~~lfY~k~GF~~~~~~~~~ 156 (339)
....+..++|+|++||+|+|+++++.+++.+.+. +++.+.+.+..+|.+++++ |+|+||+..++..+.
T Consensus 77 ~~~~~~~~~~~~~~rg~G~g~~~~~~~~~~~~~~~~~~~i~~~~~~~N~~~~~~-~~k~GF~~~g~~~~~ 145 (152)
T PF13523_consen 77 GDRGIHRLIVDPEYRGQGLGKAMLRALIEFLFEDPGVDRIVLDPHEDNTRAIRL-YEKAGFRKVGEFEFP 145 (152)
T ss_dssp TEEEEEEEESTGGGTTSSHHHHHHHHHHHHHHTSTT--EEEEEEBTT-HHHHHH-HHHTT-EEEEEEEES
T ss_pred CEEEEeeeeechhhcCCCHHHHHHHHHHHHHHhCCCCCEEEEecCcCCHHHHHH-HHHcCCEEeeEEECC
Confidence 4456778899999999999999999999999987 8999999999999999999 999999999886543
No 16
>PRK10975 TDP-fucosamine acetyltransferase; Provisional
Probab=99.57 E-value=5.6e-14 Score=122.84 Aligned_cols=136 Identities=17% Similarity=0.115 Sum_probs=97.2
Q ss_pred EEEEEcCCcchHHHHHHHHHHhccCCCC-ccccccc----cccchhHHh-hcCCCceEEEEE-ECCeEEEEEEEEEeecc
Q 019558 6 VITRSYDRQIDRARVEDLERRCEVGPAE-RVFLFTD----TLGDPICRI-RNSPMYKMLVAE-LDRELVGVIQGSIKQVT 78 (339)
Q Consensus 6 i~IR~~~~~~D~~~v~~L~~~~~~~~~~-~~~~~~~----~~~~~l~~~-~~~~~~~~~VAe-~~geiVG~i~~~~~~~~ 78 (339)
..||+++ ++|++.+.++....+..... .++.... .+...+... .......++++. ++|++||++.+.....
T Consensus 47 ~~iR~a~-~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~~vG~~~l~~~~~- 124 (194)
T PRK10975 47 TGARVAT-ETDIPALRQLAAQAFAQSRFRAPWYAPDDSGRFYAQWIENAVRGTFDHQCLLLRDASGQIQGFVTLRELND- 124 (194)
T ss_pred CCcccCC-cccHHHHHHHHHHHhhhccccCccCChhHHHHHHHHHHHHhhccccCCcEEEEEcCCCCEEEEEEEEecCC-
Confidence 5689999 99999999998876432111 1111111 111111111 112223455555 4689999997643221
Q ss_pred ccCCCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHHHHhhCCCEEeecC
Q 019558 79 VQKPHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKLFVNKLGYVNFRTP 153 (339)
Q Consensus 79 ~~~~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY~k~GF~~~~~~ 153 (339)
..++|..++|+|+|||+|||++|++.+++++++.|++.+.+.|...|.+++++ |+|+||+..++.
T Consensus 125 ---------~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~-yek~Gf~~~~~~ 189 (194)
T PRK10975 125 ---------TDARIGLLAVFPGAQGRGIGARLMQAALNWCQARGLTRLRVATQMGNLAALRL-YIRSGANIESTA 189 (194)
T ss_pred ---------CceEEEEEEEChhhcCCCHHHHHHHHHHHHHHHcCCCEEEEEeCCCcHHHHHH-HHHCCCeEeEEE
Confidence 12778888999999999999999999999999999999999999999999998 999999987653
No 17
>PRK07922 N-acetylglutamate synthase; Validated
Probab=99.57 E-value=5.3e-14 Score=120.43 Aligned_cols=123 Identities=20% Similarity=0.296 Sum_probs=90.3
Q ss_pred CCeEEEEEcCCcchHHHHHHHHHHhccCCCCccccccccccchhHHhhcCCCceEEEEE-ECCeEEEEEEEEEeeccccC
Q 019558 3 YGEVITRSYDRQIDRARVEDLERRCEVGPAERVFLFTDTLGDPICRIRNSPMYKMLVAE-LDRELVGVIQGSIKQVTVQK 81 (339)
Q Consensus 3 ~~~i~IR~~~~~~D~~~v~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~VAe-~~geiVG~i~~~~~~~~~~~ 81 (339)
..++.||+++ ++|.+.+.++.+....... ...........+. ..+++++ +++++||++.+.....
T Consensus 3 ~~~i~iR~a~-~~D~~~i~~L~~~~~~~~~--------~~~~~~~~~~~~~-~~~~va~~~~~~iiG~~~~~~~~~---- 68 (169)
T PRK07922 3 AGAITVRRAR-TSDVPAIKRLVDPYAQGRI--------LLEKNLVTLYEAV-QEFWVAEHLDGEVVGCGALHVMWE---- 68 (169)
T ss_pred CCCceeecCC-HhhHHHHHHHHHHHhhcCc--------cccchHHHHHhhc-CcEEEEEecCCcEEEEEEEeecCC----
Confidence 3568999999 9999999999876432110 0111111222222 4567888 8899999987654221
Q ss_pred CCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHHHHhhCCCEEee
Q 019558 82 PHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKLFVNKLGYVNFR 151 (339)
Q Consensus 82 ~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY~k~GF~~~~ 151 (339)
..+.|..++|+|+|||+|||++|+++++++++++|++.+++.+.. +++ |+|+||+..+
T Consensus 69 ------~~~~i~~l~V~p~~rgkGiG~~Ll~~~~~~a~~~g~~~l~~~~~~-----~~f-Y~k~GF~~~~ 126 (169)
T PRK07922 69 ------DLAEIRTVAVDPAARGRGVGHAIVERLLDVARELGLSRVFVLTFE-----VEF-FARHGFVEID 126 (169)
T ss_pred ------CceEEEEEEECHHHhCCCHHHHHHHHHHHHHHHcCCCEEEEEecc-----HHH-HHHCCCEECc
Confidence 126788999999999999999999999999999999999876542 455 9999999854
No 18
>TIGR03827 GNAT_ablB putative beta-lysine N-acetyltransferase. Members of this protein family are GNAT family acetyltransferases, based on a seed alignment in which every member is associated with a lysine 2,3-aminomutase family protein, usually as the adjacent gene. This family includes AblB, the enzyme beta-lysine acetyltransferase that completes the two-step synthesis of the osmolyte (compatible solute) N-epsilon-acetyl-beta-lysine; all members of the family may have this function. Note that N-epsilon-acetyl-beta-lysine has been observed only in methanogenic archaea (e.g. Methanosarcina) but that this model, paired with TIGR03820, suggests a much broader distribution.
Probab=99.57 E-value=6.4e-14 Score=128.57 Aligned_cols=133 Identities=13% Similarity=0.073 Sum_probs=103.4
Q ss_pred CeEEEEEcCCcchHHHHHHHHHHhccCCCCccccccccccchhHHhhcCCCceEEEEEECCeEEEEEEEEEeeccccCCC
Q 019558 4 GEVITRSYDRQIDRARVEDLERRCEVGPAERVFLFTDTLGDPICRIRNSPMYKMLVAELDRELVGVIQGSIKQVTVQKPH 83 (339)
Q Consensus 4 ~~i~IR~~~~~~D~~~v~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~VAe~~geiVG~i~~~~~~~~~~~~~ 83 (339)
..+.||+++ ++|++++.+|.+.++..... +. . ..+.+..... +...+++++.+|++||++.+.+..
T Consensus 114 ~~~~IR~a~-~~D~~~l~~L~~~v~~~~~~-~~-~---~~~~l~~~~~-~~~~~~v~~~~g~iVG~~~~~~~~------- 179 (266)
T TIGR03827 114 EGFTLRIAT-EDDADAMAALYRKVFPTYPF-PI-H---DPAYLLETMK-SNVVYFGVEDGGKIIALASAEMDP------- 179 (266)
T ss_pred CceEEEECC-HHHHHHHHHHHHHHhccCCC-Cc-c---CHHHHHHHhc-CCcEEEEEEECCEEEEEEEEecCC-------
Confidence 458999999 99999999999887532111 11 0 0112222222 446778889999999999763321
Q ss_pred CCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHHHHhhCCCEEeecC
Q 019558 84 EDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKLFVNKLGYVNFRTP 153 (339)
Q Consensus 84 ~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY~k~GF~~~~~~ 153 (339)
....++|..++|+|+|||+|||++||+.+++++++.|+..+++.+...|.++.++ |+|+||+..++.
T Consensus 180 --~~~~~eI~~i~V~P~yRG~GiG~~Ll~~l~~~a~~~g~~~l~~~~~~~n~~a~~l-y~k~GF~~~G~l 246 (266)
T TIGR03827 180 --ENGNAEMTDFATLPEYRGKGLAKILLAAMEKEMKEKGIRTAYTIARASSYGMNIT-FARLGYAYGGTL 246 (266)
T ss_pred --CCCcEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCcEEEeehhhcchhHHHH-HHHcCCccccEE
Confidence 1234789999999999999999999999999999999999999999999999998 999999987764
No 19
>PRK09491 rimI ribosomal-protein-alanine N-acetyltransferase; Provisional
Probab=99.57 E-value=9.6e-14 Score=115.48 Aligned_cols=126 Identities=16% Similarity=0.231 Sum_probs=95.2
Q ss_pred eEEEEEcCCcchHHHHHHHHHHhccCCCCccccccccccchhHHhhcCCCceEEEEEECCeEEEEEEEEEeeccccCCCC
Q 019558 5 EVITRSYDRQIDRARVEDLERRCEVGPAERVFLFTDTLGDPICRIRNSPMYKMLVAELDRELVGVIQGSIKQVTVQKPHE 84 (339)
Q Consensus 5 ~i~IR~~~~~~D~~~v~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~VAe~~geiVG~i~~~~~~~~~~~~~~ 84 (339)
+++||+++ .+|++.+.++.......+.. .+.+... ..+....++++.+|++||++.+....
T Consensus 1 ~~~iR~~~-~~D~~~l~~l~~~~~~~~~~---------~~~~~~~-~~~~~~~~~~~~~~~~vG~~~~~~~~-------- 61 (146)
T PRK09491 1 MNTISSLT-PADLPAAYHIEQRAHAFPWS---------EKTFASN-QGERYLNLKLTVNGQMAAFAITQVVL-------- 61 (146)
T ss_pred CcchhcCC-hhhhHHHHHHHHhcCCCCCC---------HHHHHHH-HhcCceEEEEEECCeEEEEEEEEeec--------
Confidence 36899999 99999999997654322111 1111111 12223445567889999999764321
Q ss_pred CCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHHHHhhCCCEEeecC
Q 019558 85 DLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKLFVNKLGYVNFRTP 153 (339)
Q Consensus 85 ~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY~k~GF~~~~~~ 153 (339)
....+..++|+|+|||+|||++|++.+++.+++.++..+.+.+...|.+|+++ |+|+||+..+..
T Consensus 62 ---~~~~~~~i~v~~~~rg~G~g~~ll~~~~~~~~~~~~~~~~~~~~~~N~~a~~~-y~k~Gf~~~~~~ 126 (146)
T PRK09491 62 ---DEATLFNIAVDPDYQRQGLGRALLEHLIDELEKRGVATLWLEVRASNAAAIAL-YESLGFNEVTIR 126 (146)
T ss_pred ---CceEEEEEEECHHHccCCHHHHHHHHHHHHHHHCCCcEEEEEEccCCHHHHHH-HHHcCCEEeeee
Confidence 11557788999999999999999999999999999999999999999999998 999999986653
No 20
>TIGR03103 trio_acet_GNAT GNAT-family acetyltransferase TIGR03103. Members of this protein family belong to the GNAT family of acetyltransferases. Each is part of a conserved three-gene cassette sparsely distributed across at least twenty different species known so far, including alpha, beta, and gamma Proteobacteria, Mycobacterium, and Prosthecochloris, which is a member of the Chlorobi. The other two members of the cassette are a probable protease and an asparagine synthetase family protein.
Probab=99.56 E-value=1e-13 Score=139.04 Aligned_cols=136 Identities=24% Similarity=0.312 Sum_probs=103.5
Q ss_pred CeEEEEEcCCcchHHHHHHHHHHhccCCCCccccccccccchhHHhhcCCCceEEEEEE--CCeEEEEEEEEEeeccccC
Q 019558 4 GEVITRSYDRQIDRARVEDLERRCEVGPAERVFLFTDTLGDPICRIRNSPMYKMLVAEL--DRELVGVIQGSIKQVTVQK 81 (339)
Q Consensus 4 ~~i~IR~~~~~~D~~~v~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~VAe~--~geiVG~i~~~~~~~~~~~ 81 (339)
..+.||++.+..|++++.+|.+.+++.+... +.+......+...+++|++ +|++||++.+.......
T Consensus 81 ~g~~IR~~~~~~D~~~I~~L~~~~~~~p~~~---------~~~~~~~~~~~~~~~vA~~~~~g~IVG~~~~~~~~~~~-- 149 (547)
T TIGR03103 81 RGFTVRRLRGPADVDAINRLYAARGMVPVRV---------DFVLDHRHSRAITYLVAEDEASGAIIGTVMGVDHRKAF-- 149 (547)
T ss_pred CCcEEEeCCChhHHHHHHHHHHhcCCCCCCH---------HHHHHHhcCCCceEEEEEECCCCeEEEEEEEEeccccc--
Confidence 3589999843899999999999875433211 1112223445567888886 58999999764322111
Q ss_pred CCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHHHHhhCCCEEeecC
Q 019558 82 PHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKLFVNKLGYVNFRTP 153 (339)
Q Consensus 82 ~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY~k~GF~~~~~~ 153 (339)
......+++..++|+|+|||+|||++||+.++++++++|+.++.+.+..+|..|++| |+|+||+.....
T Consensus 150 --~d~~~~~~i~~l~V~P~~Rg~GIG~~Ll~~l~e~a~~~G~~~i~L~V~~~N~~Ai~f-Y~klGf~~~~~y 218 (547)
T TIGR03103 150 --NDPEHGSSLWCLAVDPQAAHPGVGEALVRALAEHFQSRGCAYMDLSVMHDNEQAIAL-YEKLGFRRIPVF 218 (547)
T ss_pred --cCCCCCeEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEcCCCHHHHHH-HHHCCCEEeeEE
Confidence 011123678999999999999999999999999999999999999999999999998 999999976553
No 21
>PF13673 Acetyltransf_10: Acetyltransferase (GNAT) domain; PDB: 2FIW_A 1BOB_A 3FNC_B 3EXN_A.
Probab=99.55 E-value=8.6e-14 Score=110.84 Aligned_cols=113 Identities=21% Similarity=0.166 Sum_probs=80.8
Q ss_pred hHHHHHHHHHHhccCCCCc-ccccc---ccccchhHHhhcCCCceEEEEEECCeEEEEEEEEEeeccccCCCCCCccEEE
Q 019558 16 DRARVEDLERRCEVGPAER-VFLFT---DTLGDPICRIRNSPMYKMLVAELDRELVGVIQGSIKQVTVQKPHEDLAKVGY 91 (339)
Q Consensus 16 D~~~v~~L~~~~~~~~~~~-~~~~~---~~~~~~l~~~~~~~~~~~~VAe~~geiVG~i~~~~~~~~~~~~~~~~~~~~~ 91 (339)
|++++.+|.+......... ..... ....+.+......+...++|++++|++||++.+. .. +.
T Consensus 1 D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~----~~----------~~ 66 (117)
T PF13673_consen 1 DIPAIAELYREAWQENYWDYGPEQIDAWRYSPEDLEEYLEEGSHTIFVAEEGGEIVGFAWLE----PD----------GE 66 (117)
T ss_dssp GHHHHHHHHHHHHHHHTTTTSHHHHHHHHSSHHHHHHHHCTCCCEEEEEEETTEEEEEEEEE----TC----------EE
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHHHHHhcCHHHHHHHHHhcCCEEEEEEECCEEEEEEEEc----CC----------Ce
Confidence 7888888888863221111 10000 1123345556666657899999999999999763 11 45
Q ss_pred EEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHHHHhhCCC
Q 019558 92 VLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKLFVNKLGY 147 (339)
Q Consensus 92 I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY~k~GF 147 (339)
|..+.|+|+|||+|||++|++.+++++++ |...+.+. .|..+.++ |+++||
T Consensus 67 i~~l~v~p~~r~~Gig~~Ll~~~~~~~~~-~~~~l~~~---~~~~a~~~-y~~~GF 117 (117)
T PF13673_consen 67 ISHLYVLPEYRGRGIGRALLDAAEKEAKD-GIRRLTVE---ANERARRF-YRKLGF 117 (117)
T ss_dssp EEEEEE-GGGTTSSHHHHHHHHHHHHHTT-TCEEEEEE---C-HHHHHH-HHHTT-
T ss_pred EEEEEEChhhcCCcHHHHHHHHHHHHHHc-CCcEEEEE---eCHHHHHH-HHhCCC
Confidence 88899999999999999999999999976 88766655 88888998 999998
No 22
>COG0456 RimI Acetyltransferases [General function prediction only]
Probab=99.53 E-value=1.4e-13 Score=117.67 Aligned_cols=137 Identities=22% Similarity=0.208 Sum_probs=102.6
Q ss_pred CeEEEEEcCCcchHH--HHHHHHHHhccCCCCccccccccccchhHHhhcCCCceEEEEEEC---C----eEEEEEEEEE
Q 019558 4 GEVITRSYDRQIDRA--RVEDLERRCEVGPAERVFLFTDTLGDPICRIRNSPMYKMLVAELD---R----ELVGVIQGSI 74 (339)
Q Consensus 4 ~~i~IR~~~~~~D~~--~v~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~VAe~~---g----eiVG~i~~~~ 74 (339)
..+.+|.++ ..|.. .+..+...++... .+ .-...+...........+++..+ + +++|++....
T Consensus 10 ~~~~ir~~~-~~d~~~~~~~~~~~~~~~~~--~~-----~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~G~~~~~~ 81 (177)
T COG0456 10 DKVTIREAI-NKDLLDVALAALEARTFDIR--LP-----WSREYFEKDLTQAPELLLVAETGGLDGLLDGKVVGFLLVRV 81 (177)
T ss_pred cceehhhhh-hcccchHHHHHHhhhcCCCC--Cc-----chHHHHHHHHhhCcceeEEEEecccCCCcccceeEEEEEEE
Confidence 457899999 99998 7788877765432 00 11122334444455777777763 3 5999998863
Q ss_pred eeccccCCCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCC-cEEEEEeccCChHHHHHHHhhCCCEEeecC
Q 019558 75 KQVTVQKPHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDV-DYAYMATEKDNEASVKLFVNKLGYVNFRTP 153 (339)
Q Consensus 75 ~~~~~~~~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~-~~i~l~v~~~N~~a~~lfY~k~GF~~~~~~ 153 (339)
..... .. ...++|..++|+|+|||+|||++|++.+++.+++++. ..+.+.|..+|.+|+.+ |+|+||+..+..
T Consensus 82 ~~~~~----~~-~~~~~i~~iaV~p~~r~~Gig~~Ll~~~~~~~~~~~~~~~~~L~V~~~N~~Ai~l-Y~~~GF~~~~~~ 155 (177)
T COG0456 82 VDGRP----SA-DHEGHIYNLAVDPEYRGRGIGRALLDEALERLRERGLADKIVLEVRESNEAAIGL-YRKLGFEVVKIR 155 (177)
T ss_pred ecCCc----cc-cCccEEEEEEEChHhhcCCHHHHHHHHHHHHHHhcCCCceEEEEEecCChHHHHH-HHHcCCEEEeee
Confidence 22111 00 2348999999999999999999999999999999986 89999999999999999 999999987664
Q ss_pred e
Q 019558 154 A 154 (339)
Q Consensus 154 ~ 154 (339)
.
T Consensus 156 ~ 156 (177)
T COG0456 156 K 156 (177)
T ss_pred h
Confidence 3
No 23
>PRK07757 acetyltransferase; Provisional
Probab=99.53 E-value=2.3e-13 Score=113.90 Aligned_cols=123 Identities=20% Similarity=0.135 Sum_probs=88.8
Q ss_pred eEEEEEcCCcchHHHHHHHHHHhccCCCCccccccccccchhHHhhcCCCceEEEEEECCeEEEEEEEEEeeccccCCCC
Q 019558 5 EVITRSYDRQIDRARVEDLERRCEVGPAERVFLFTDTLGDPICRIRNSPMYKMLVAELDRELVGVIQGSIKQVTVQKPHE 84 (339)
Q Consensus 5 ~i~IR~~~~~~D~~~v~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~VAe~~geiVG~i~~~~~~~~~~~~~~ 84 (339)
++.||+++ ++|++.+.++.......... .. .......... ..++++..+|++||++.+.....
T Consensus 1 ~~~ir~~~-~~D~~~l~~l~~~~~~~~~~-~~-------~~~~~~~~~~-~~~~i~~~~~~lvG~~~l~~~~~------- 63 (152)
T PRK07757 1 MMEIRKAR-LSDVKAIHALINVYAKKGLM-LP-------RSLDELYENI-RDFYVAEEEGEIVGCCALHILWE------- 63 (152)
T ss_pred CceEeeCC-cccHHHHHHHHHHHHhcCCc-cC-------CCHHHHHhcc-CcEEEEEECCEEEEEEEEEeccC-------
Confidence 37899999 99999999998764311110 00 0011111111 23577888999999998754332
Q ss_pred CCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHHHHhhCCCEEeecC
Q 019558 85 DLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKLFVNKLGYVNFRTP 153 (339)
Q Consensus 85 ~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY~k~GF~~~~~~ 153 (339)
..++|..++|+|+|||+|+|++|++.+++++++.|+..+.+.+. + .++ |+|+||+..+..
T Consensus 64 ---~~~~i~~v~V~p~~rg~Glg~~Ll~~l~~~a~~~g~~~i~~~~~--~---~~~-Y~k~GF~~~~~~ 123 (152)
T PRK07757 64 ---DLAEIRSLAVSEDYRGQGIGRMLVEACLEEARELGVKRVFALTY--Q---PEF-FEKLGFREVDKE 123 (152)
T ss_pred ---CceEEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCCCeEEEEeC--c---HHH-HHHCCCEEcccc
Confidence 23788899999999999999999999999999999988876553 2 355 999999987653
No 24
>TIGR01575 rimI ribosomal-protein-alanine acetyltransferase. Members of this model belong to the GCN5-related N-acetyltransferase (GNAT) superfamily. This model covers prokarotes and the archaea. The seed contains a characterized accession for Gram negative E. coli. An untraceable characterized accession (PIR|S66013) for Gram positive B. subtilis scores well (205.0) in the full alignment. Characterized members are lacking in the archaea. Noise cutoff (72.4) was set to exclude M. loti paralog of rimI. Trusted cutoff (80.0) was set at next highest scoring member in the mini-database.
Probab=99.52 E-value=3.6e-13 Score=108.87 Aligned_cols=118 Identities=20% Similarity=0.226 Sum_probs=89.9
Q ss_pred hHHHHHHHHHHhccCCCCccccccccccchhHHhhcCCCceEEEEEECCeEEEEEEEEEeeccccCCCCCCccEEEEEEE
Q 019558 16 DRARVEDLERRCEVGPAERVFLFTDTLGDPICRIRNSPMYKMLVAELDRELVGVIQGSIKQVTVQKPHEDLAKVGYVLGL 95 (339)
Q Consensus 16 D~~~v~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~VAe~~geiVG~i~~~~~~~~~~~~~~~~~~~~~I~~l 95 (339)
|++++.++...++..+.. .+.+..........++++.+++++||++...... ...++..+
T Consensus 1 d~~~i~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~-----------~~~~i~~~ 60 (131)
T TIGR01575 1 DLKAVLEIEAAAFAFPWT---------EAQFAEELANYHLCYLLARIGGKVVGYAGVQIVL-----------DEAHILNI 60 (131)
T ss_pred CHHHHHHHHHhhCCCCCC---------HHHHHHHhcCCCceEEEEecCCeEEEEEEEEecC-----------CCeEEEEE
Confidence 577888888777543211 1112222223335567777789999999754321 12678899
Q ss_pred EeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHHHHhhCCCEEeecCe
Q 019558 96 RVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKLFVNKLGYVNFRTPA 154 (339)
Q Consensus 96 ~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY~k~GF~~~~~~~ 154 (339)
.|+|+|||+|+|++|++.+++++.+.+...+.+.+...|..++.+ |+|+||+..+...
T Consensus 61 ~v~~~~rg~G~g~~ll~~~~~~~~~~~~~~i~~~~~~~n~~~~~~-y~~~Gf~~~~~~~ 118 (131)
T TIGR01575 61 AVKPEYQGQGIGRALLRELIDEAKGRGVNEIFLEVRVSNIAAQAL-YKKLGFNEIAIRR 118 (131)
T ss_pred EECHHHcCCCHHHHHHHHHHHHHHHcCCCeEEEEEecccHHHHHH-HHHcCCCcccccc
Confidence 999999999999999999999999999999999999999999998 9999999877643
No 25
>PF13420 Acetyltransf_4: Acetyltransferase (GNAT) domain; PDB: 3DR8_A 3DR6_A 2AE6_B 2JLM_C 2J8R_A 1YVO_B 2J8M_A 2J8N_A 2BL1_A 3IWG_A ....
Probab=99.52 E-value=6.2e-13 Score=111.39 Aligned_cols=136 Identities=18% Similarity=0.176 Sum_probs=93.5
Q ss_pred EEEcCCcchHHHHHHHHHHhccCCCCcc---ccccccccchhHHhhcCCCceEEEEEE-CCeEEEEEEEEEeeccccCCC
Q 019558 8 TRSYDRQIDRARVEDLERRCEVGPAERV---FLFTDTLGDPICRIRNSPMYKMLVAEL-DRELVGVIQGSIKQVTVQKPH 83 (339)
Q Consensus 8 IR~~~~~~D~~~v~~L~~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~~~~~~VAe~-~geiVG~i~~~~~~~~~~~~~ 83 (339)
||+++ .+|++++.++.+.......... ....+...+.+......+....+++.. +|++||++.+.....
T Consensus 1 IR~~~-~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~iiG~~~~~~~~~------ 73 (155)
T PF13420_consen 1 IRPAT-EEDLEEILKLYNEPRHEYFFTFEYPEDSEESFERWIESIIDSSKQRLFLVAEEDGKIIGYVSLRDIDP------ 73 (155)
T ss_dssp EEE---GGGHHHHHHHHHHHHHHTSSSSCSSHS-HHHHHHHHHHHHHHHTTEEEEEEECTTEEEEEEEEEESSS------
T ss_pred CCCCc-HHHHHHHHHHHhhhhhcceeEecCCCCCHHHHHHHHHHhcccCCCcEEEEEEcCCcEEEEEEEEeeec------
Confidence 79999 9999999999876421111100 001112222333332233355555555 899999997763321
Q ss_pred CCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHH-HhCCCcEEEEEeccCChHHHHHHHhhCCCEEeecCe
Q 019558 84 EDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWF-TSNDVDYAYMATEKDNEASVKLFVNKLGYVNFRTPA 154 (339)
Q Consensus 84 ~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a-~~~g~~~i~l~v~~~N~~a~~lfY~k~GF~~~~~~~ 154 (339)
....+.+ .+.|.|+||++|+|+.|++.++++| ++.|++.+.+.+...|.+++++ |+++||+..++..
T Consensus 74 --~~~~~~~-~~~v~~~~~~~gig~~l~~~l~~~af~~~~~~~i~~~v~~~N~~~i~~-~~~~GF~~~g~~~ 141 (155)
T PF13420_consen 74 --YNHTAEL-SIYVSPDYRGKGIGRKLLDELIEYAFKELGIHKIYLEVFSSNEKAINF-YKKLGFEEEGELK 141 (155)
T ss_dssp --GTTEEEE-EEEEEGGGTTSSHHHHHHHHHHHHH-HHTT-CEEEEEEETT-HHHHHH-HHHTTEEEEEEEE
T ss_pred --cCCEEEE-eeEEChhHCCCcHHHHHHHHHHHHhhhccCeEEEEEEEecCCHHHHHH-HHhCCCEEEEEEe
Confidence 2223444 4778899999999999999999999 8899999999999999999999 9999999988764
No 26
>PRK10514 putative acetyltransferase; Provisional
Probab=99.49 E-value=4.5e-13 Score=111.06 Aligned_cols=124 Identities=19% Similarity=0.153 Sum_probs=86.2
Q ss_pred EEEEEcCCcchHHHHHHHHHHhccCCCCcc-ccccccccchhHHhhcCCCceEEEE-EECCeEEEEEEEEEeeccccCCC
Q 019558 6 VITRSYDRQIDRARVEDLERRCEVGPAERV-FLFTDTLGDPICRIRNSPMYKMLVA-ELDRELVGVIQGSIKQVTVQKPH 83 (339)
Q Consensus 6 i~IR~~~~~~D~~~v~~L~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~VA-e~~geiVG~i~~~~~~~~~~~~~ 83 (339)
+.||+++ ++|++++.++++.......... ......+...+..... ...++++ ..++++||++.+. .
T Consensus 2 ~~ir~~~-~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~iG~~~~~--~------- 69 (145)
T PRK10514 2 ISIRRSR-HEEGERLVAIWRRSVDATHDFLSAEDRAEIEELVRSFLP--EAPLWVAVDERDQPVGFMLLS--G------- 69 (145)
T ss_pred ceeeecc-hhhHHHHHHHHHHHHHHhCcccCchhHHHHHHHHHHHhc--cCceEEEEecCCcEEEEEEEe--c-------
Confidence 7799999 9999999999987532111110 1111112222333222 2234445 4578999998652 1
Q ss_pred CCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHHHHhhCCCEEeecC
Q 019558 84 EDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKLFVNKLGYVNFRTP 153 (339)
Q Consensus 84 ~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY~k~GF~~~~~~ 153 (339)
.++..++|+|+|||+|||++|++.+++.+ +.+.+.+...|..|+++ |+|+||+..++.
T Consensus 70 ------~~~~~~~v~p~~rgkGig~~Ll~~~~~~~-----~~i~~~v~~~N~~a~~~-yek~Gf~~~~~~ 127 (145)
T PRK10514 70 ------GHMEALFVDPDVRGCGVGRMLVEHALSLH-----PELTTDVNEQNEQAVGF-YKKMGFKVTGRS 127 (145)
T ss_pred ------CcEeEEEECHHhccCCHHHHHHHHHHHhc-----cccEEEeecCCHHHHHH-HHHCCCEEeccc
Confidence 23557889999999999999999999864 35778889999999998 999999987664
No 27
>COG3153 Predicted acetyltransferase [General function prediction only]
Probab=99.48 E-value=1.1e-12 Score=110.88 Aligned_cols=134 Identities=22% Similarity=0.162 Sum_probs=98.6
Q ss_pred CeEEEEEcCCcchHHHHHHHHHHhccCCCCccccccccccchhHHhhcCCCceEEEEEECCeEEEEEEEEEeeccccCCC
Q 019558 4 GEVITRSYDRQIDRARVEDLERRCEVGPAERVFLFTDTLGDPICRIRNSPMYKMLVAELDRELVGVIQGSIKQVTVQKPH 83 (339)
Q Consensus 4 ~~i~IR~~~~~~D~~~v~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~VAe~~geiVG~i~~~~~~~~~~~~~ 83 (339)
++|.||.-+ +.|.+++.++.+..+..... ....+.+..-........+||+++|++||.|.+..-...
T Consensus 2 ~~~~ir~e~-~~d~~~i~~~~~~aF~~~~e------~~~v~~lR~~~~~~~~LslVA~d~g~vvG~Il~s~v~~~----- 69 (171)
T COG3153 2 MMMLIRTET-PADIPAIEALTREAFGPGRE------AKLVDKLREGGRPDLTLSLVAEDDGEVVGHILFSPVTVG----- 69 (171)
T ss_pred CccEEEecC-hhhHHHHHHHHHHHhhcchH------HHHHHHHHhcCCcccceeEEEeeCCEEEEEEEEeEEEec-----
Confidence 568999999 99999999999998762111 111222222222224788999999999999988654432
Q ss_pred CCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHHHHhhCCCEEeecCeee
Q 019558 84 EDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKLFVNKLGYVNFRTPAIL 156 (339)
Q Consensus 84 ~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY~k~GF~~~~~~~~~ 156 (339)
........+.-|+|+|+|||||||++|++..++.++..|+..+.+ ..++. ||.|+||+......+.
T Consensus 70 g~~~~~~~LaPLaV~p~~qg~GIG~~Lvr~~le~a~~~G~~~v~v---lGdp~----YY~rfGF~~~~~~~l~ 135 (171)
T COG3153 70 GEELGWLGLAPLAVDPEYQGQGIGSALVREGLEALRLAGASAVVV---LGDPT----YYSRFGFEPAAGAKLY 135 (171)
T ss_pred CcccceEEEEeEEEchhhcCCcHHHHHHHHHHHHHHHCCCCEEEE---ecCcc----cccccCcEEccccccc
Confidence 122344668889999999999999999999999999999876644 34445 8999999987664433
No 28
>TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase. Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species.
Probab=99.47 E-value=1.1e-12 Score=121.82 Aligned_cols=140 Identities=20% Similarity=0.186 Sum_probs=96.3
Q ss_pred CeEEEEEcCCcchHHHHHHHHHHhccCCCCccccccccccchhHHhhcCCCceEEEEEE--CCeEEEEEEEEEeeccccC
Q 019558 4 GEVITRSYDRQIDRARVEDLERRCEVGPAERVFLFTDTLGDPICRIRNSPMYKMLVAEL--DRELVGVIQGSIKQVTVQK 81 (339)
Q Consensus 4 ~~i~IR~~~~~~D~~~v~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~VAe~--~geiVG~i~~~~~~~~~~~ 81 (339)
..+.+|+++...|.+.+.++.+..+...........+.+..........+ ..++++++ +|++||++.......
T Consensus 148 ~g~~~r~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~a~~~~~~~~vG~~~~~~~~~---- 222 (292)
T TIGR03448 148 DGVTVRAYVGAPDDAEWLRVNNAAFAWHPEQGGWTRADLAERRAEPWFDP-AGLFLAFDDAPGELLGFHWTKVHPD---- 222 (292)
T ss_pred CCeEeeccCCCcchHHHHHHHHHHhhCCCccCCcCHHHHHHHhhCcCCCc-CceEEEEECCCCcEEEEEEEEecCC----
Confidence 35889998735688888888777653221110111111111000001113 44677777 589999975443221
Q ss_pred CCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHHHHhhCCCEEeecC
Q 019558 82 PHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKLFVNKLGYVNFRTP 153 (339)
Q Consensus 82 ~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY~k~GF~~~~~~ 153 (339)
....+++..+.|+|+|||+|||++|++.+++++++.|+..+.+.+...|..++++ |+|+||+...+.
T Consensus 223 ----~~~~~~i~~~~V~p~~rg~GiG~~ll~~~~~~~~~~g~~~v~l~v~~~N~~a~~~-y~k~GF~~~~~~ 289 (292)
T TIGR03448 223 ----EPALGEVYVVGVDPAAQGRGLGDALTLIGLHHLAARGLPAVMLYVEADNEAAVRT-YEKLGFTVAEVD 289 (292)
T ss_pred ----CCceeEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEeCCCHHHHHH-HHHcCCEEcccc
Confidence 1123677778999999999999999999999999999999999999999999998 999999986553
No 29
>COG1247 Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane]
Probab=99.47 E-value=2.2e-12 Score=108.83 Aligned_cols=141 Identities=20% Similarity=0.164 Sum_probs=102.3
Q ss_pred eEEEEEcCCcchHHHHHHHHHHhccCCCCccc---cccccccchhHHhhcCCCceEEEEEEC-CeEEEEEEEEEeecccc
Q 019558 5 EVITRSYDRQIDRARVEDLERRCEVGPAERVF---LFTDTLGDPICRIRNSPMYKMLVAELD-RELVGVIQGSIKQVTVQ 80 (339)
Q Consensus 5 ~i~IR~~~~~~D~~~v~~L~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~VAe~~-geiVG~i~~~~~~~~~~ 80 (339)
++.||+++ .+|++.+.++.+..-.+...... ...+.+...+.... ..+...+|++.+ |+++|++.+.......
T Consensus 1 ~~~ir~~~-~~Dl~~I~~IY~~~v~~~~a~~e~~~~~~~~~~~~~~~~~-~~g~p~~V~~~~~g~v~G~a~~~~fr~r~- 77 (169)
T COG1247 1 EMEIRPAT-AADLEAILEIYNGAVENTAATFEEDPVSLEERAAWFSGRT-RDGYPVVVAEEEDGKVLGYASAGPFRERP- 77 (169)
T ss_pred CcEEecCh-HHhHHHHHHHHHHhhhcceEEEeccCCCHHHHHHHHHhcc-cCCceEEEEEcCCCeEEEEEEeeeccCcc-
Confidence 37899999 99999999998876322211000 00111111122222 222577888766 9999999875544222
Q ss_pred CCCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHHHHhhCCCEEeecCe
Q 019558 81 KPHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKLFVNKLGYVNFRTPA 154 (339)
Q Consensus 81 ~~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY~k~GF~~~~~~~ 154 (339)
.-+......+.|+|++||+|||++|++.+++.+...|+..+...+..+|.+|+++ .+++||+..++..
T Consensus 78 -----ay~~tve~SiYv~~~~~g~GiG~~Ll~~Li~~~~~~g~~~lva~I~~~n~aSi~l-h~~~GF~~~G~~~ 145 (169)
T COG1247 78 -----AYRHTVELSIYLDPAARGKGLGKKLLQALITEARALGVRELVAGIESDNLASIAL-HEKLGFEEVGTFP 145 (169)
T ss_pred -----ccceEEEEEEEECcccccccHHHHHHHHHHHHHHhCCeEEEEEEEcCCCcHhHHH-HHHCCCEEecccc
Confidence 1223445678999999999999999999999999999999999999999999999 9999999988753
No 30
>PRK15130 spermidine N1-acetyltransferase; Provisional
Probab=99.47 E-value=1.5e-12 Score=112.80 Aligned_cols=140 Identities=16% Similarity=0.148 Sum_probs=99.9
Q ss_pred CCeEEEEEcCCcchHHHHHHHHHHhccCCCCccccccc--cccchhHHhhcCCCceEEEEEECCeEEEEEEEEEeecccc
Q 019558 3 YGEVITRSYDRQIDRARVEDLERRCEVGPAERVFLFTD--TLGDPICRIRNSPMYKMLVAELDRELVGVIQGSIKQVTVQ 80 (339)
Q Consensus 3 ~~~i~IR~~~~~~D~~~v~~L~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~VAe~~geiVG~i~~~~~~~~~~ 80 (339)
+..+.||+++ ++|++.+.++..............+.. ...+.+.+....+....++++.+|++||++.+......
T Consensus 4 ~~~l~lR~~~-~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~iG~~~~~~~~~~-- 80 (186)
T PRK15130 4 AHSVKLRPLE-REDLRFVHQLDNNASVMRYWFEEPYEAFVELSDLYDKHIHDQSERRFVVECDGEKAGLVELVEINHV-- 80 (186)
T ss_pred CCeeEEecCC-HHHHHHHHHHhcChHHHhhcCCcccccHHHHHHHHHHhhhcccCcEEEEEECCEEEEEEEEEeecCC--
Confidence 3568999999 999999999865542211110000000 11112333344455567888889999999976543211
Q ss_pred CCCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHh-CCCcEEEEEeccCChHHHHHHHhhCCCEEeecC
Q 019558 81 KPHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTS-NDVDYAYMATEKDNEASVKLFVNKLGYVNFRTP 153 (339)
Q Consensus 81 ~~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~-~g~~~i~l~v~~~N~~a~~lfY~k~GF~~~~~~ 153 (339)
...+. .+++|+|+|||+|+|+++++.+++++.+ .++..+.+.+...|.+|+++ |+|+||+..+..
T Consensus 81 ------~~~~~-~~~~v~~~~~g~G~g~~l~~~l~~~~~~~~~~~rv~~~v~~~N~~s~~~-yek~GF~~~~~~ 146 (186)
T PRK15130 81 ------HRRAE-FQIIISPEYQGKGLATRAAKLAMDYGFTVLNLYKLYLIVDKENEKAIHI-YRKLGFEVEGEL 146 (186)
T ss_pred ------CCeEE-EEEEECHHHcCCCHHHHHHHHHHHHHhhcCCceEEEEEEccCCHHHHHH-HHHCCCEEEEEE
Confidence 11233 3689999999999999999999999886 69999999999999999999 999999987664
No 31
>PHA01807 hypothetical protein
Probab=99.45 E-value=1.7e-12 Score=108.83 Aligned_cols=125 Identities=12% Similarity=0.031 Sum_probs=85.9
Q ss_pred cchHHHHHHHHHHhccCCCC-ccccccccccchhHHhhcCCCceEEEEEECCeEEEEEEEEEeeccccCCCCCCccEEEE
Q 019558 14 QIDRARVEDLERRCEVGPAE-RVFLFTDTLGDPICRIRNSPMYKMLVAELDRELVGVIQGSIKQVTVQKPHEDLAKVGYV 92 (339)
Q Consensus 14 ~~D~~~v~~L~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~VAe~~geiVG~i~~~~~~~~~~~~~~~~~~~~~I 92 (339)
.+|++.+.+|.......... .++...+.....+.....++....++++++|++||++.+....... ......+
T Consensus 11 ~~d~~~~~~l~l~~l~e~p~~~~w~s~ee~~~~~~~~~~~~~~~~lva~~dg~lvG~~~l~~~~~~~------~~~i~~l 84 (153)
T PHA01807 11 AGTPSELQGLCWLAIQELEEFTLFRSKEEALERILDSTESNDRTELLVFRDGKLAGIAVLVFEDDPH------VGPCLGV 84 (153)
T ss_pred hCCHHHHHHHHHHHHHhCccCCCCCChHHHHHHHHHHhhCCCceEEEEEECCEEEEEEEEEcCCCcc------eeeeccc
Confidence 78888888887776221111 1111111111222222234446668899999999999775433111 1122223
Q ss_pred EEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHHHHhhC
Q 019558 93 LGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKLFVNKL 145 (339)
Q Consensus 93 ~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY~k~ 145 (339)
..++|+|+|||+|||++||+.+++++++.|+..+.+++...|.+|+++ |++.
T Consensus 85 ~~lYV~pe~RG~GiG~~Ll~~~~~~Ar~~G~~~l~l~v~~~n~~a~~~-y~~~ 136 (153)
T PHA01807 85 QWQYVLPEYRNAGVAREFLRELIRLAGEGNLPLIAFSHREGEGRYTIH-YRRV 136 (153)
T ss_pred eeEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEecCCcHHHHHH-HHhc
Confidence 447999999999999999999999999999999999999999999999 9864
No 32
>PRK10809 ribosomal-protein-S5-alanine N-acetyltransferase; Provisional
Probab=99.43 E-value=8.2e-12 Score=108.95 Aligned_cols=141 Identities=14% Similarity=0.104 Sum_probs=95.8
Q ss_pred CCeEEEEEcCCcchHHHHHHHHHHh--ccCCCCccc----ccccccc---chhHHhhcCCCceEEEEEE--CCeEEEEEE
Q 019558 3 YGEVITRSYDRQIDRARVEDLERRC--EVGPAERVF----LFTDTLG---DPICRIRNSPMYKMLVAEL--DRELVGVIQ 71 (339)
Q Consensus 3 ~~~i~IR~~~~~~D~~~v~~L~~~~--~~~~~~~~~----~~~~~~~---~~l~~~~~~~~~~~~VAe~--~geiVG~i~ 71 (339)
...+.||+++ ++|.+++.++.... ...+..... .....+. ..+......+....+++.+ ++++||.+.
T Consensus 15 t~rl~LR~~~-~~Da~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~iG~i~ 93 (194)
T PRK10809 15 TDRLVVRLVH-ERDAWRLADYYAENRHFLKPWEPVRDESHCYPSGWQARLGMINEFHKQGSAFYFALLDPDEKEIIGVAN 93 (194)
T ss_pred cCcEEEEeCC-HHHHHHHHHHHHhCHHhccCCCCCCcccccCHHHHHHHHHHHHHHHhcCcEEEEEEEECCCCeEEEEEE
Confidence 3568999999 99999999987752 111111000 0001111 1122222334344455443 589999998
Q ss_pred EEEeeccccCCCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHh-CCCcEEEEEeccCChHHHHHHHhhCCCEEe
Q 019558 72 GSIKQVTVQKPHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTS-NDVDYAYMATEKDNEASVKLFVNKLGYVNF 150 (339)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~-~g~~~i~l~v~~~N~~a~~lfY~k~GF~~~ 150 (339)
+...... ... ....++.|.|+|||+|+|+++++.+++++.+ .|++.+.+.|...|.+|+++ |+|+||+..
T Consensus 94 l~~~~~~-------~~~-~~eig~~i~~~~~G~G~~~ea~~~ll~~~~~~l~l~~i~~~v~~~N~~S~~l-~ek~Gf~~~ 164 (194)
T PRK10809 94 FSNVVRG-------SFH-ACYLGYSLGQKWQGQGLMFEALQAAIRYMQRQQHMHRIMANYMPHNKRSGDL-LARLGFEKE 164 (194)
T ss_pred EEeecCC-------Cee-eEEEEEEECHHHcCCCHHHHHHHHHHHHHHhcCCceEEEEEeeCCCHHHHHH-HHHCCCcEE
Confidence 7533210 011 2334678999999999999999999999987 59999999999999999999 999999976
Q ss_pred ecC
Q 019558 151 RTP 153 (339)
Q Consensus 151 ~~~ 153 (339)
+..
T Consensus 165 g~~ 167 (194)
T PRK10809 165 GYA 167 (194)
T ss_pred eee
Confidence 653
No 33
>TIGR03585 PseH pseudaminic acid biosynthesis N-acetyl transferase. Sequences in this family are members of the pfam00583 (GNAT) superfamily of acetyltransferases and are proposed to perform a N-acetylation step in the process of pseudaminic acid biosynthesis in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci. Significantly, many genomes containing other components of this pathway lack this gene, indicating that some other N-acetyl transferases may be incolved and/or the step is optional, resulting in a non-acetylated pseudaminic acid variant sugar.
Probab=99.41 E-value=3.2e-12 Score=107.08 Aligned_cols=135 Identities=15% Similarity=0.140 Sum_probs=97.4
Q ss_pred EEEEcCCcchHHHHHHHHHHhccCCCC--ccccccccccchhHHhhcCCCceEEEEEECCeEEEEEEEEEeeccccCCCC
Q 019558 7 ITRSYDRQIDRARVEDLERRCEVGPAE--RVFLFTDTLGDPICRIRNSPMYKMLVAELDRELVGVIQGSIKQVTVQKPHE 84 (339)
Q Consensus 7 ~IR~~~~~~D~~~v~~L~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~VAe~~geiVG~i~~~~~~~~~~~~~~ 84 (339)
.+|+++ ++|++.+.++.......... ......+.....+.....++....+++..+|++||++.+......
T Consensus 2 ~lr~~~-~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vG~~~~~~~~~~------ 74 (156)
T TIGR03585 2 NFTPLN-SEELELVLEWRNHPDVRANMYSDHLIDWEEHLHFIEALKQDPNRRYWIVCQESRPIGVISFTDINLV------ 74 (156)
T ss_pred CcccCC-HHHHHHHHHhhCCHHHHhhccCcCCCCHHHHHHHHHHhhcCCCceEEEEEECCEEEEEEEEEecChh------
Confidence 479999 99999999987654321110 010111112223444555555667888889999999977543210
Q ss_pred CCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHh-CCCcEEEEEeccCChHHHHHHHhhCCCEEeecC
Q 019558 85 DLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTS-NDVDYAYMATEKDNEASVKLFVNKLGYVNFRTP 153 (339)
Q Consensus 85 ~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~-~g~~~i~l~v~~~N~~a~~lfY~k~GF~~~~~~ 153 (339)
...+.+ ++.+.|.+| +|||+++++.+++++.+ .+++.+.+.+...|.+|+++ |+|+||+..+..
T Consensus 75 --~~~~~~-g~~~~~~~~-~G~g~~~~~~~~~~a~~~~~~~~i~~~v~~~N~~s~~~-y~k~Gf~~~g~~ 139 (156)
T TIGR03585 75 --HKSAFW-GIYANPFCK-PGVGSVLEEAALEYAFEHLGLHKLSLEVLEFNNKALKL-YEKFGFEREGVF 139 (156)
T ss_pred --hCeEEE-EEEeChhhh-cCchHHHHHHHHHHHHhhCCeeEEEEEEeccCHHHHHH-HHHcCCeEeeee
Confidence 122444 345999999 99999999999999986 69999999999999999999 999999987754
No 34
>PRK12308 bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional
Probab=99.41 E-value=2.8e-12 Score=130.66 Aligned_cols=124 Identities=19% Similarity=0.110 Sum_probs=91.0
Q ss_pred CeEEEEEcCCcchHHHHHHHHHHhccCCCCccccccccccchhHHhhcCCCceEEEEEECCeEEEEEEEEEeeccccCCC
Q 019558 4 GEVITRSYDRQIDRARVEDLERRCEVGPAERVFLFTDTLGDPICRIRNSPMYKMLVAELDRELVGVIQGSIKQVTVQKPH 83 (339)
Q Consensus 4 ~~i~IR~~~~~~D~~~v~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~VAe~~geiVG~i~~~~~~~~~~~~~ 83 (339)
..+.||+++ ++|.+.+.++...........+. ....+.. +...++|++++|++||++.+.....
T Consensus 462 ~gm~IR~a~-~~D~~~I~~L~~~~~~~~~~~~~--------~~~~l~~-~~~~~~Va~~~g~IVG~~~l~~~~~------ 525 (614)
T PRK12308 462 SGVKVRPAR-LTDIDAIEGMVAYWAGLGENLPR--------SRNELVR-DIGSFAVAEHHGEVTGCASLYIYDS------ 525 (614)
T ss_pred CCCEEEECC-HHHHHHHHHHHHHHHhhhccccc--------CHHHHhc-ccCcEEEEEECCEEEEEEEEEEcCC------
Confidence 347899999 99999999997664321111111 0111111 2245788999999999997754321
Q ss_pred CCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHHHHhhCCCEEeecC
Q 019558 84 EDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKLFVNKLGYVNFRTP 153 (339)
Q Consensus 84 ~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY~k~GF~~~~~~ 153 (339)
..++|..++|+|+|||||||++|++.+++++++.|++.+.+.+. + .. ||+|+||+..+..
T Consensus 526 ----~~~~I~~i~V~P~~rGkGIGk~Ll~~l~~~ak~~g~~~i~l~~~--a---~~-FYek~GF~~~~~~ 585 (614)
T PRK12308 526 ----GLAEIRSLGVEAGWQVQGQGSALVQYLVEKARQMAIKKVFVLTR--V---PE-FFMKQGFSPTSKS 585 (614)
T ss_pred ----CeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEeeC--c---HH-HHHHCCCEECCcc
Confidence 13789999999999999999999999999999999998887542 2 34 5999999987653
No 35
>KOG3396 consensus Glucosamine-phosphate N-acetyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.40 E-value=2.8e-12 Score=102.05 Aligned_cols=134 Identities=18% Similarity=0.195 Sum_probs=103.2
Q ss_pred eEEEEEcCCcchHHH-HHHHHHHhccCCCCccccccccccchhHHhhcCCC-ceEEEEEEC--CeEEEEEEEEEeecccc
Q 019558 5 EVITRSYDRQIDRAR-VEDLERRCEVGPAERVFLFTDTLGDPICRIRNSPM-YKMLVAELD--RELVGVIQGSIKQVTVQ 80 (339)
Q Consensus 5 ~i~IR~~~~~~D~~~-v~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~VAe~~--geiVG~i~~~~~~~~~~ 80 (339)
.+.||++. .+|+.. ..++..+. ...+. ...+++...+..+..+.. +...|+++- ++|||.+.+.+.....
T Consensus 6 ~~~lR~L~-~~D~~kGf~elL~qL--T~vG~--vt~e~F~krf~~mk~~~~~Y~i~Vied~~s~~vigtatL~IE~KfI- 79 (150)
T KOG3396|consen 6 GFKLRPLE-EDDYGKGFIELLKQL--TSVGV--VTREQFEKRFEAMKKSGDWYYIVVIEDKESEKVIGTATLFIERKFI- 79 (150)
T ss_pred ceEEeecc-cccccchHHHHHHHH--hhccc--cCHHHHHHHHHHHHhcCCcEEEEEEEeCCcCeEEEEEEEEEehhhh-
Confidence 38999999 999875 66665553 11111 112445556666666665 666777774 8999999998765322
Q ss_pred CCCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHHHHhhCCCEEee
Q 019558 81 KPHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKLFVNKLGYVNFR 151 (339)
Q Consensus 81 ~~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY~k~GF~~~~ 151 (339)
+.-...+.|..+.|+++|||++||+.|+..+...++..|+-++.|...+.|.. ||+|+||....
T Consensus 80 ---h~~g~rGhiEDVVV~~~~rgk~LGkllv~~Lv~l~k~lgcYKi~LdC~~~nv~----FYeKcG~s~~~ 143 (150)
T KOG3396|consen 80 ---HGCGSRGHIEDVVVDSEYRGKQLGKLLVETLVDLAKSLGCYKIILDCDPKNVK----FYEKCGYSNAG 143 (150)
T ss_pred ---hcccccCceeEEEeChhhhhhHHhHHHHHHHHHHHHhcCcEEEEEecchhhhh----HHHHcCccccc
Confidence 22334589999999999999999999999999999999999999999999998 89999998754
No 36
>PRK10151 ribosomal-protein-L7/L12-serine acetyltransferase; Provisional
Probab=99.40 E-value=1.4e-11 Score=106.04 Aligned_cols=140 Identities=15% Similarity=0.132 Sum_probs=97.1
Q ss_pred CCeEEEEEcCCcchHHHHHHHHHHhcc-----CCCCccccccccccchhHHhh---cCCCceEEEEEECCeEEEEEEEEE
Q 019558 3 YGEVITRSYDRQIDRARVEDLERRCEV-----GPAERVFLFTDTLGDPICRIR---NSPMYKMLVAELDRELVGVIQGSI 74 (339)
Q Consensus 3 ~~~i~IR~~~~~~D~~~v~~L~~~~~~-----~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~VAe~~geiVG~i~~~~ 74 (339)
.+.+.+|+++ .+|++.+.++...... .....+....+...+.+.... .......++++.+|++||++.+..
T Consensus 8 t~rl~Lr~~~-~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~iG~~~l~~ 86 (179)
T PRK10151 8 SESLELHAVD-ESHVTPLHQLVCKNKTWLQQSLNWPQFVQSEEDTRKTVQGNVMLHQRGYAKMFMIFKEDELIGVLSFNR 86 (179)
T ss_pred CCcEEEEeCC-HHHHHHHHHHHHHhHHHHHhcCCCcCccCCHHHHHHHHHHHHHHHhcCCcEEEEEEECCEEEEEEEEEe
Confidence 3568999999 9999999999743321 011111011122223333321 122123577778899999997643
Q ss_pred eeccccCCCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHh-CCCcEEEEEeccCChHHHHHHHhhCCCEEeecC
Q 019558 75 KQVTVQKPHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTS-NDVDYAYMATEKDNEASVKLFVNKLGYVNFRTP 153 (339)
Q Consensus 75 ~~~~~~~~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~-~g~~~i~l~v~~~N~~a~~lfY~k~GF~~~~~~ 153 (339)
.... ...+.+ ++.++|+|||+|+|+++++.+++++.+ .+++.+.+.+...|.+|+++ |+|+||+..++.
T Consensus 87 ~~~~--------~~~~~i-g~~i~~~~~g~G~~tea~~~l~~~~~~~~~~~ri~~~v~~~N~~S~~v-~ek~Gf~~~g~~ 156 (179)
T PRK10151 87 IEPL--------NKTAYI-GYWLDESHQGQGIISQALQALIHHYAQSGELRRFVIKCRVDNPASNQV-ALRNGFTLEGCL 156 (179)
T ss_pred eccC--------CCceEE-EEEEChhhcCCcHHHHHHHHHHHHHHhhCCccEEEEEEcCCCHHHHHH-HHHCCCEEEeEe
Confidence 3211 112444 457999999999999999999999986 58999999999999999999 999999987764
No 37
>PRK10562 putative acetyltransferase; Provisional
Probab=99.40 E-value=5.7e-12 Score=104.74 Aligned_cols=121 Identities=20% Similarity=0.254 Sum_probs=86.0
Q ss_pred EEEcCCcchHHHHHHHHHHhccCCCCccccccccccch---hHHhhcCCCceEEEEEECCeEEEEEEEEEeeccccCCCC
Q 019558 8 TRSYDRQIDRARVEDLERRCEVGPAERVFLFTDTLGDP---ICRIRNSPMYKMLVAELDRELVGVIQGSIKQVTVQKPHE 84 (339)
Q Consensus 8 IR~~~~~~D~~~v~~L~~~~~~~~~~~~~~~~~~~~~~---l~~~~~~~~~~~~VAe~~geiVG~i~~~~~~~~~~~~~~ 84 (339)
||+++ .+|++.+.+++........ +......+... +.+... +....+++.++|++||++.+...
T Consensus 2 ir~~~-~~D~~~i~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~iG~~~~~~~--------- 68 (145)
T PRK10562 2 IREYQ-PSDLPAILQLWLESTIWAH--PFIKEQYWRESAPLVRDVYL-PAAQTWVWEEDGKLLGFVSVLEG--------- 68 (145)
T ss_pred ccccc-chhhHHHHHHHHHhccccC--CCCCHHHHHHhHHHhhhhhc-CcccEEEEEECCEEEEEEEEeec---------
Confidence 79999 9999999999876532111 11000111111 111111 33456788888999999965311
Q ss_pred CCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHHHHhhCCCEEeec
Q 019558 85 DLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKLFVNKLGYVNFRT 152 (339)
Q Consensus 85 ~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY~k~GF~~~~~ 152 (339)
.++..++|+|+|||+|+|++|++.+++. +..+.+.+..+|..|+++ |+|+||+..+.
T Consensus 69 -----~~i~~~~v~~~~rg~G~g~~ll~~~~~~-----~~~~~~~v~~~N~~s~~~-y~k~Gf~~~~~ 125 (145)
T PRK10562 69 -----RFVGALFVAPKAVRRGIGKALMQHVQQR-----YPHLSLEVYQKNQRAVNF-YHAQGFRIVDS 125 (145)
T ss_pred -----cEEEEEEECHHHcCCCHHHHHHHHHHhh-----CCeEEEEEEcCChHHHHH-HHHCCCEEccc
Confidence 3467789999999999999999999774 356788889999999998 99999999775
No 38
>KOG3235 consensus Subunit of the major N alpha-acetyltransferase [General function prediction only]
Probab=99.39 E-value=3.1e-12 Score=104.30 Aligned_cols=132 Identities=19% Similarity=0.211 Sum_probs=101.1
Q ss_pred EEEEEcCCcchHHHHHHHHHHhccCCCCccccccccccchhHHhhcCCCceEEEEEE-CCeEEEEEEEEEeeccccCCCC
Q 019558 6 VITRSYDRQIDRARVEDLERRCEVGPAERVFLFTDTLGDPICRIRNSPMYKMLVAEL-DRELVGVIQGSIKQVTVQKPHE 84 (339)
Q Consensus 6 i~IR~~~~~~D~~~v~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~VAe~-~geiVG~i~~~~~~~~~~~~~~ 84 (339)
|.||.++ ++|+-.+....-.|- +.+ -++.-.+-..+.+| ...+||++ +|+|||++.+.......
T Consensus 2 m~iR~ar-~~DL~~mQ~~Nl~~l--pEN------yqmkyylyh~lswp-~lSyVA~D~~gkiVGYvlAkmee~p~----- 66 (193)
T KOG3235|consen 2 MNIRRAR-PDDLLEMQHCNLLNL--PEN------YQMKYYLYHGLSWP-QLSYVAEDENGKIVGYVLAKMEEDPD----- 66 (193)
T ss_pred cccccCC-HHHHHHhhhcccccC--cHH------HhHHHHHHhhcccc-cceEEEEcCCCcEEEEeeeehhhccc-----
Confidence 6799999 888877665433321 111 13444455566777 88899995 69999999886655221
Q ss_pred CCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHh-CCCcEEEEEeccCChHHHHHHHh-hCCCEEeecC
Q 019558 85 DLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTS-NDVDYAYMATEKDNEASVKLFVN-KLGYVNFRTP 153 (339)
Q Consensus 85 ~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~-~g~~~i~l~v~~~N~~a~~lfY~-k~GF~~~~~~ 153 (339)
.....+.|..++|..+||+.|||++||........+ .++.++.|.|..+|.+|+.| |+ .+||+.....
T Consensus 67 ~~~~hGhItSlaV~rs~RrlGla~kLm~qa~rAm~E~~~A~yvsLHVR~SNraAl~L-Y~~tl~F~v~eve 136 (193)
T KOG3235|consen 67 DEPPHGHITSLAVKRSYRRLGLAQKLMNQASRAMVEVYEAKYVSLHVRKSNRAALHL-YKNTLGFVVCEVE 136 (193)
T ss_pred CCCCCCeeEEeeehhhHHHhhHHHHHHHHHHHHHHHhhcceEEEEeeecccHHHHHh-hhhccceEEeecc
Confidence 223459999999999999999999999998887776 59999999999999999999 76 9999986654
No 39
>PF13508 Acetyltransf_7: Acetyltransferase (GNAT) domain; PDB: 3EY5_A 3FRM_B 3D8P_B 3GY9_A 3GYA_A 3S6F_A 2Q7B_A 1CM0_B 1XEB_B 1Y7R_A ....
Probab=99.39 E-value=6.9e-12 Score=93.24 Aligned_cols=77 Identities=38% Similarity=0.467 Sum_probs=61.3
Q ss_pred ceEEEEEECCeEEEEEEEEEeeccccCCCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCC
Q 019558 55 YKMLVAELDRELVGVIQGSIKQVTVQKPHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDN 134 (339)
Q Consensus 55 ~~~~VAe~~geiVG~i~~~~~~~~~~~~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N 134 (339)
..++++++++++||++.+.... ...+|..++|+|+|||+|||++|++.+.+.+.. ..+++.+ +
T Consensus 3 ~~~~~~~~~~~ivG~~~~~~~~-----------~~~~i~~~~v~~~~rg~Gig~~ll~~~~~~~~~---~~i~l~~---~ 65 (79)
T PF13508_consen 3 ERFFVAEDDGEIVGFIRLWPNE-----------DFAYIGYLAVDPEYRGKGIGSKLLNYLLEKAKS---KKIFLFT---N 65 (79)
T ss_dssp EEEEEEEETTEEEEEEEEEETT-----------TEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHTC---SEEEEEE---E
T ss_pred cEEEEEEECCEEEEEEEEEEcC-----------CEEEEEEEEECHHHcCCCHHHHHHHHHHHHcCC---CcEEEEE---c
Confidence 5678999999999999773322 248999999999999999999999999998844 3455555 4
Q ss_pred hHHHHHHHhhCCCEE
Q 019558 135 EASVKLFVNKLGYVN 149 (339)
Q Consensus 135 ~~a~~lfY~k~GF~~ 149 (339)
+.+..+ |+|+||++
T Consensus 66 ~~~~~f-Y~~~GF~~ 79 (79)
T PF13508_consen 66 PAAIKF-YEKLGFEE 79 (79)
T ss_dssp HHHHHH-HHHTTEEE
T ss_pred HHHHHH-HHHCcCCC
Confidence 566776 99999984
No 40
>PLN02825 amino-acid N-acetyltransferase
Probab=99.38 E-value=4.7e-12 Score=124.91 Aligned_cols=122 Identities=18% Similarity=0.174 Sum_probs=90.8
Q ss_pred EEEEcCCcchHHHHHHHHHHhccCCCCccccccccccchhHHhhcCCCceEEEEEECCeEEEEEEEEEeeccccCCCCCC
Q 019558 7 ITRSYDRQIDRARVEDLERRCEVGPAERVFLFTDTLGDPICRIRNSPMYKMLVAELDRELVGVIQGSIKQVTVQKPHEDL 86 (339)
Q Consensus 7 ~IR~~~~~~D~~~v~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~VAe~~geiVG~i~~~~~~~~~~~~~~~~ 86 (339)
.||+++ .+|++.+.+|.+..+..... .. ...+.+. .. ...++|++.||++||++.+.....
T Consensus 369 ~IR~At-~eDi~~I~~Li~~lee~g~l-v~----rs~e~le---~e-i~~f~V~e~Dg~IVG~aal~~~~~--------- 429 (515)
T PLN02825 369 GTRMAR-VEDLAGIRQIIRPLEESGIL-VR----RTDEELL---RA-LDSFVVVEREGSIIACAALFPFFE--------- 429 (515)
T ss_pred hheeCC-HHHHHHHHHHHHHHHHcCCC-cC----CCHHHHH---hc-CCcEEEEEECCEEEEEEEEEeecC---------
Confidence 589999 99999999999886422110 00 0011111 11 245789999999999997654321
Q ss_pred ccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHHHHhhCCCEEeec
Q 019558 87 AKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKLFVNKLGYVNFRT 152 (339)
Q Consensus 87 ~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY~k~GF~~~~~ 152 (339)
...++|..++|+|+|||+|+|++||++++++++++|++.+.+.+. .+.++ |+|+||+....
T Consensus 430 ~~~aEI~~laV~P~yRGkGiG~~LL~~le~~Ar~~G~~~L~Lltt----~a~~f-Y~k~GF~~~~~ 490 (515)
T PLN02825 430 EKCGEVAAIAVSPECRGQGQGDKLLDYIEKKAASLGLEKLFLLTT----RTADW-FVRRGFSECSI 490 (515)
T ss_pred CCcEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEeC----cHHHH-HHHCCCEEeCh
Confidence 134788899999999999999999999999999999999988763 24565 99999997543
No 41
>COG1246 ArgA N-acetylglutamate synthase and related acetyltransferases [Amino acid transport and metabolism]
Probab=99.38 E-value=3.2e-12 Score=105.03 Aligned_cols=121 Identities=17% Similarity=0.139 Sum_probs=90.2
Q ss_pred EEEEcCCcchHHHHHHHHHHhccCCCCccccccccccchhHHhhcCCCceEEEEEECCeEEEEEEEEEeeccccCCCCCC
Q 019558 7 ITRSYDRQIDRARVEDLERRCEVGPAERVFLFTDTLGDPICRIRNSPMYKMLVAELDRELVGVIQGSIKQVTVQKPHEDL 86 (339)
Q Consensus 7 ~IR~~~~~~D~~~v~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~VAe~~geiVG~i~~~~~~~~~~~~~~~~ 86 (339)
.||.++ ..|.+.+.+|.+..+..- . +-.......+..-..+.+++.+|.+||++.+... ..
T Consensus 2 ~iR~A~-~~Di~~I~~Li~~~~~~g-i--------l~~rs~~~le~~i~dF~i~E~~g~viGC~aL~~~---------~~ 62 (153)
T COG1246 2 QIRKAR-ISDIPAILELIRPLELQG-I--------LLRRSREQLEEEIDDFTIIERDGKVIGCAALHPV---------LE 62 (153)
T ss_pred ceeecc-ccchHHHHHHHHHHhhcc-c--------cchhhHHHHHHHHhhheeeeeCCcEEEEEeeccc---------Cc
Confidence 689999 999999999998875311 0 0000011111122456899999999999966421 23
Q ss_pred ccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHHHHhhCCCEEee
Q 019558 87 AKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKLFVNKLGYVNFR 151 (339)
Q Consensus 87 ~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY~k~GF~~~~ 151 (339)
.+.+.+..|+|+|+|||+|+|..|++.++..|++.|++.+++-+. ..+. |++++||+.+.
T Consensus 63 ~~~gE~~~laV~pd~r~~G~G~~Ll~~~~~~Ar~~gi~~lf~LTt-~~~~----~F~~~GF~~vd 122 (153)
T COG1246 63 EDLGELRSLAVHPDYRGSGRGERLLERLLADARELGIKELFVLTT-RSPE----FFAERGFTRVD 122 (153)
T ss_pred cCeeeEEEEEECHHhcCCCcHHHHHHHHHHHHHHcCCceeeeeec-ccHH----HHHHcCCeECc
Confidence 356999999999999999999999999999999999999988765 2233 69999999743
No 42
>PRK10314 putative acyltransferase; Provisional
Probab=99.38 E-value=4.1e-12 Score=106.90 Aligned_cols=126 Identities=11% Similarity=0.046 Sum_probs=87.7
Q ss_pred EEEcCCcchHHHHHHHHHHhccCCCCccccccccccchhHHhhcCCCceEEEEEECCeEEEEEEEEEeeccccCCCCCCc
Q 019558 8 TRSYDRQIDRARVEDLERRCEVGPAERVFLFTDTLGDPICRIRNSPMYKMLVAELDRELVGVIQGSIKQVTVQKPHEDLA 87 (339)
Q Consensus 8 IR~~~~~~D~~~v~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~VAe~~geiVG~i~~~~~~~~~~~~~~~~~ 87 (339)
+..++ .+++.++..|....++.....+. . .+.+. -..+....+++.+++++||++.+..... ..
T Consensus 9 ~~~l~-~~~~~~~~~lR~~VF~~eq~~~~--~-e~D~~----d~~~~~~h~~~~~~~~~vg~~r~~~~~~--------~~ 72 (153)
T PRK10314 9 HSELS-VSQLYALLQLRCAVFVVEQNCPY--Q-DIDGD----DLTGDNRHILGWKNDELVAYARILKSDD--------DL 72 (153)
T ss_pred hhhCC-HHHHHHHHHHHHHHhhhhcCCCc--c-ccCCC----CCCCCcEEEEEEECCEEEEEEEEecCCC--------CC
Confidence 34566 77888888998888765433221 1 11110 0012244567788999999997754321 11
Q ss_pred cEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhC-CCcEEEEEeccCChHHHHHHHhhCCCEEeecC
Q 019558 88 KVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSN-DVDYAYMATEKDNEASVKLFVNKLGYVNFRTP 153 (339)
Q Consensus 88 ~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~-g~~~i~l~v~~~N~~a~~lfY~k~GF~~~~~~ 153 (339)
..++|..++|+|+|||+|||++||+.+++++++. +...+.+.+ +..+..+ |+|+||+..+..
T Consensus 73 ~~~~i~rv~V~~~~rG~GiG~~Lm~~~~~~~~~~~~~~~i~L~a---~~~a~~f-Y~k~GF~~~g~~ 135 (153)
T PRK10314 73 EPVVIGRVIVSEALRGEKVGQQLMSKTLESCTRHWPDKPVYLGA---QAHLQNF-YQSFGFIPVTEV 135 (153)
T ss_pred CCEEEEEEEECHHHhCCCHHHHHHHHHHHHHHHHCCCCcEEEeh---HHHHHHH-HHHCCCEECCCc
Confidence 2378999999999999999999999999999875 677777765 3445665 999999987763
No 43
>PRK05279 N-acetylglutamate synthase; Validated
Probab=99.36 E-value=8.3e-12 Score=122.64 Aligned_cols=123 Identities=19% Similarity=0.124 Sum_probs=89.5
Q ss_pred EEEEEcCCcchHHHHHHHHHHhccCCCCccccccccccchhHHhhcCCCceEEEEEECCeEEEEEEEEEeeccccCCCCC
Q 019558 6 VITRSYDRQIDRARVEDLERRCEVGPAERVFLFTDTLGDPICRIRNSPMYKMLVAELDRELVGVIQGSIKQVTVQKPHED 85 (339)
Q Consensus 6 i~IR~~~~~~D~~~v~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~VAe~~geiVG~i~~~~~~~~~~~~~~~ 85 (339)
+.||+++ .+|++++.++........... . ............++++++++++||++.+.....
T Consensus 295 ~~IR~at-~~D~~~I~~L~~~~~~~~~~~------~---~~~~~l~~~~~~~~va~~dg~iVG~~~~~~~~~-------- 356 (441)
T PRK05279 295 EQLRRAT-IDDVGGILELIRPLEEQGILV------R---RSREQLEREIDKFTVIERDGLIIGCAALYPFPE-------- 356 (441)
T ss_pred HHeEeCC-HHHHHHHHHHHHHHHHcCCcc------c---cCHHHHhcccCcEEEEEECCEEEEEEEEEEcCC--------
Confidence 6799999 999999999986542111000 0 001111112245788899999999986643221
Q ss_pred CccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHHHHhhCCCEEeec
Q 019558 86 LAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKLFVNKLGYVNFRT 152 (339)
Q Consensus 86 ~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY~k~GF~~~~~ 152 (339)
...++|..++|+|+|||+|+|++|+++++++++++|+..+.+.+ ..++++ |+|+||+..+.
T Consensus 357 -~~~~~I~~l~V~p~~Rg~GiG~~Ll~~l~~~a~~~g~~~l~l~~----~~a~~f-Y~k~GF~~~g~ 417 (441)
T PRK05279 357 -EKMGEMACLAVHPDYRGSGRGERLLKRIEQRARQLGLKRLFVLT----TRTAHW-FLERGFVPVDV 417 (441)
T ss_pred -CCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEec----chHHHH-HHHCcCEECCh
Confidence 13478999999999999999999999999999999998886543 346776 99999998765
No 44
>PRK09831 putative acyltransferase; Provisional
Probab=99.35 E-value=8.3e-12 Score=104.10 Aligned_cols=122 Identities=16% Similarity=0.148 Sum_probs=83.5
Q ss_pred EEEEEcCCcchHHHHHHHHHHhccCCC--Ccccccccccc----chhHHhhcCCCceEEEEEECCeEEEEEEEEEeeccc
Q 019558 6 VITRSYDRQIDRARVEDLERRCEVGPA--ERVFLFTDTLG----DPICRIRNSPMYKMLVAELDRELVGVIQGSIKQVTV 79 (339)
Q Consensus 6 i~IR~~~~~~D~~~v~~L~~~~~~~~~--~~~~~~~~~~~----~~l~~~~~~~~~~~~VAe~~geiVG~i~~~~~~~~~ 79 (339)
|.||+++ ++|++.+.++......... .........+. +.+..... ...+++++++|++||++.+..
T Consensus 1 ~~ir~a~-~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~iiG~~~~~~----- 72 (147)
T PRK09831 1 IQIRNYQ-PGDFQQLCAIFIRAVTMTASQHYSPQQIAAWAQIDESRWKEKLA--KSQVRVAVINAQPVGFITCIE----- 72 (147)
T ss_pred CccccCC-hhhHHHHHHHHHHHHHHhhhhcCCHHHHHhccCCCHHHHHHHHh--cCceEEEEECCEEEEEEEehh-----
Confidence 3589999 9999999999876521110 00000001111 01112222 245788899999999985521
Q ss_pred cCCCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHHHHhhCCCEEeecCe
Q 019558 80 QKPHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKLFVNKLGYVNFRTPA 154 (339)
Q Consensus 80 ~~~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY~k~GF~~~~~~~ 154 (339)
.++..+.|+|+|||+|||++|++++++.++. +.+. .|..++++ |+|+||+..++..
T Consensus 73 ----------~~i~~~~v~p~~~g~GiG~~Ll~~~~~~~~~-------l~v~-~~~~a~~~-Y~k~Gf~~~g~~~ 128 (147)
T PRK09831 73 ----------HYIDMLFVDPEYTRRGVASALLKPLIKSESE-------LTVD-ASITAKPF-FERYGFQTVKQQR 128 (147)
T ss_pred ----------ceeeeEEECHHHcCCCHHHHHHHHHHHHhhh-------eEee-cchhhHHH-HHHCCCEEeeccc
Confidence 4677889999999999999999999998865 2333 35678887 9999999988754
No 45
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=99.34 E-value=2.5e-11 Score=114.38 Aligned_cols=127 Identities=13% Similarity=0.101 Sum_probs=94.6
Q ss_pred CeEEEEEcCCcchHHHHHHHHHHhccCCCCccccccccccchhHHhhcCCCceEEEEE--E---CCeEEEEEEEEEeecc
Q 019558 4 GEVITRSYDRQIDRARVEDLERRCEVGPAERVFLFTDTLGDPICRIRNSPMYKMLVAE--L---DRELVGVIQGSIKQVT 78 (339)
Q Consensus 4 ~~i~IR~~~~~~D~~~v~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~VAe--~---~geiVG~i~~~~~~~~ 78 (339)
+.++||+++ +.|++.+.+|.+.......... ..-.+.+......+ . .+++. + ++.+||++.+....
T Consensus 185 m~~~Ir~a~-~~Dl~ri~~L~~~tnqfn~~~~----~~s~~~i~~~l~~~-~-~~~~~~~d~~gd~givG~~~~~~~~-- 255 (320)
T TIGR01686 185 LSLNISKND-EQNVQRVEELLGRTNQFNATYT----RLNQEDVAQHMQKE-E-IVTVSMSDRFGDSGIIGIFVFEKKE-- 255 (320)
T ss_pred CEEEEEECC-hhhhHHHHHHHHhHHhhhccCc----cCCHHHHHHHhcCC-C-EEEEEEEecCCCCceEEEEEEEecC--
Confidence 458999999 9999999999988732111111 11112344444444 3 34333 2 56899999764321
Q ss_pred ccCCCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEec--cCChHHHHHHHhhCCCEE
Q 019558 79 VQKPHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATE--KDNEASVKLFVNKLGYVN 149 (339)
Q Consensus 79 ~~~~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~--~~N~~a~~lfY~k~GF~~ 149 (339)
...+|..++|+|++||+|||++||+++++.++++|++.+.+.+. ..|.+|+.| |+|+||+.
T Consensus 256 ---------~~~~I~~l~vs~r~~grGig~~Ll~~l~~~a~~~G~~~i~l~v~~~~~N~~A~~f-Y~~~GF~~ 318 (320)
T TIGR01686 256 ---------GNLFIDDLCMSCRALGRGVETRMLRWLFEQALDLGNHNARLYYRRTERNMPFLSF-YEQIGFED 318 (320)
T ss_pred ---------CcEEEEEEEEcHhHhcCcHHHHHHHHHHHHHHHcCCCeEEEEEeeCCCchHHHHH-HHHcCCcc
Confidence 23789999999999999999999999999999999999999875 589999998 99999985
No 46
>TIGR01890 N-Ac-Glu-synth amino-acid N-acetyltransferase. This model represents a clade of amino-acid N-acetyltransferases acting mainly on glutamate in the first step of the "acetylated" ornithine biosynthesis pathway. For this reason it is also called N-acetylglutamate synthase. The enzyme may also act on aspartate.
Probab=99.33 E-value=1.8e-11 Score=119.78 Aligned_cols=123 Identities=15% Similarity=0.126 Sum_probs=89.3
Q ss_pred EEEEEcCCcchHHHHHHHHHHhccCCCCccccccccccchhHHhhcCCCceEEEEEECCeEEEEEEEEEeeccccCCCCC
Q 019558 6 VITRSYDRQIDRARVEDLERRCEVGPAERVFLFTDTLGDPICRIRNSPMYKMLVAELDRELVGVIQGSIKQVTVQKPHED 85 (339)
Q Consensus 6 i~IR~~~~~~D~~~v~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~VAe~~geiVG~i~~~~~~~~~~~~~~~ 85 (339)
+.||+++ .+|++++.+|.+...... ... .............+++++++|++||++.+.....
T Consensus 283 ~~IR~at-~~Dl~~I~~L~~~~~~~~-~~~--------~~~~~~l~~~~~~~~V~~~dg~iVG~~~~~~~~~-------- 344 (429)
T TIGR01890 283 ESIRQAT-IDDIGGIAALIRPLEEQG-ILV--------RRSREYLEREISEFSIIEHDGNIIGCAALYPYAE-------- 344 (429)
T ss_pred hheEECC-HHHHHHHHHHHHHHHHcC-Cch--------hhhHHHHHhhcCcEEEEEECCEEEEEEEEEecCC--------
Confidence 4799999 999999999987543111 000 0111111122244678888999999997754321
Q ss_pred CccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHHHHhhCCCEEeec
Q 019558 86 LAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKLFVNKLGYVNFRT 152 (339)
Q Consensus 86 ~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY~k~GF~~~~~ 152 (339)
...+++..++|+|+|||+|+|++||++++++++++|+..+++. ..| +.++ |+|+||+..+.
T Consensus 345 -~~~~~I~~l~V~p~~Rg~GiG~~Ll~~l~~~A~~~G~~~l~v~--~~~--a~~f-Y~k~GF~~~g~ 405 (429)
T TIGR01890 345 -EDCGEMACLAVSPEYQDGGRGERLLAHIEDRARQMGISRLFVL--TTR--TGHW-FRERGFQTASV 405 (429)
T ss_pred -CCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEe--ecc--hHHH-HHHCCCEECCh
Confidence 1347888999999999999999999999999999999887643 333 3565 99999998765
No 47
>PF13302 Acetyltransf_3: Acetyltransferase (GNAT) domain; PDB: 3TTH_C 3JUW_A 2ZXV_A 2Z0Z_A 2VI7_B 3EG7_F 1YRE_C 3IGR_B 3FBU_A 2FCK_A ....
Probab=99.31 E-value=5.1e-11 Score=97.86 Aligned_cols=133 Identities=20% Similarity=0.195 Sum_probs=89.0
Q ss_pred eEEEEEcCCcchHHHHHHHHHHhccCCC---CccccccccccchhHH-hhcCC--CceEEEEEEC--CeEEEEEEEEEee
Q 019558 5 EVITRSYDRQIDRARVEDLERRCEVGPA---ERVFLFTDTLGDPICR-IRNSP--MYKMLVAELD--RELVGVIQGSIKQ 76 (339)
Q Consensus 5 ~i~IR~~~~~~D~~~v~~L~~~~~~~~~---~~~~~~~~~~~~~l~~-~~~~~--~~~~~VAe~~--geiVG~i~~~~~~ 76 (339)
.+.||+++ ++|.+.+.++......... .......+.....+.+ ....+ ...++++.+. +++||++.+....
T Consensus 1 Rl~lr~~~-~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~iG~i~~~~~~ 79 (142)
T PF13302_consen 1 RLTLRPLT-PEDADAIYEWRSDPEIRRYLPWGPPWPTLEEAEEWIQSRQDSWENHGYYYFAIEDKDDGEIIGFIGLYNID 79 (142)
T ss_dssp SEEEEE-H-GGGHHHHHHHHTTTTHCTTSSTTTSSSSHHHHHHHHHHHHHCHHEETEEEEEEEETTTTEEEEEEEEEEEE
T ss_pred CEEEEcCC-HHHHHHHHHHhcCHHHHHhcCCCCCCCCHHHHHHHHHHhhhhhhcccceEEEEEeccCCceEEEeeeeecc
Confidence 37899999 9999999999854322111 1110111122222331 11111 2455666653 5799999773332
Q ss_pred ccccCCCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHH-hCCCcEEEEEeccCChHHHHHHHhhCCCE
Q 019558 77 VTVQKPHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFT-SNDVDYAYMATEKDNEASVKLFVNKLGYV 148 (339)
Q Consensus 77 ~~~~~~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~-~~g~~~i~l~v~~~N~~a~~lfY~k~GF~ 148 (339)
. ....+.+ ++.|.|+|||+|+|++++..+++++. +.|+..+.+.+..+|.+|+++ ++|+||+
T Consensus 80 ~--------~~~~~ei-g~~i~~~~~g~G~~~~~~~~~~~~~~~~~~~~~i~a~~~~~N~~s~~~-~~k~GF~ 142 (142)
T PF13302_consen 80 K--------NNNWAEI-GYWIGPDYRGKGYGTEALKLLLDWAFEELGLHRIIATVMADNEASRRL-LEKLGFE 142 (142)
T ss_dssp T--------TTTEEEE-EEEEEGGGTTSSHHHHHHHHHHHHHHHTSTSSEEEEEEETT-HHHHHH-HHHTT-E
T ss_pred c--------CCCcccc-ccchhHHHHhhhHHHHHHHHHHHHHHhcCCcEEEEEEECcCCHHHHHH-HHHcCCC
Confidence 1 1223554 47899999999999999999999994 689999999999999999999 9999996
No 48
>KOG3234 consensus Acetyltransferase, (GNAT) family [General function prediction only]
Probab=99.24 E-value=3e-11 Score=98.57 Aligned_cols=104 Identities=27% Similarity=0.390 Sum_probs=86.9
Q ss_pred hHHhhcCCCceEEEEEE-CCeEEEEEEEEEeeccccCCCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCc
Q 019558 46 ICRIRNSPMYKMLVAEL-DRELVGVIQGSIKQVTVQKPHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVD 124 (339)
Q Consensus 46 l~~~~~~~~~~~~VAe~-~geiVG~i~~~~~~~~~~~~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~ 124 (339)
+..+...| ..+++++. +++|.|++++...+ .....++++..|.|.|+||+.|+|+.||+.+++-....++-
T Consensus 33 l~yl~~~p-e~~~~a~~p~~~imgyimgk~Eg-------~~~~wh~HvTAltVap~~Rrl~la~~lm~~led~~d~~~a~ 104 (173)
T KOG3234|consen 33 LIYLAIWP-EDFIVAEAPTGEIMGYIMGKVEG-------KDTEWHGHVTALTVAPDYRRLGLAAKLMDTLEDVSDVDNAY 104 (173)
T ss_pred HHHHHhCh-HHhEeccCCCCceEEEEeeeccc-------cCcceeeEEEEEEechhHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 44455666 66777775 48999999885544 23445699999999999999999999999999998888888
Q ss_pred EEEEEeccCChHHHHHHHhhCCCEEeecCeeeec
Q 019558 125 YAYMATEKDNEASVKLFVNKLGYVNFRTPAILVH 158 (339)
Q Consensus 125 ~i~l~v~~~N~~a~~lfY~k~GF~~~~~~~~~~~ 158 (339)
.+.+.|..+|..|+.+ |+|+||...++..-++.
T Consensus 105 fvDLfVr~sN~iAI~m-YkkLGY~~YR~Vi~YY~ 137 (173)
T KOG3234|consen 105 FVDLFVRVSNQIAIDM-YKKLGYSVYRTVIEYYS 137 (173)
T ss_pred eeeeeeeccchhHHHH-HHhcCceEEEeeeeeec
Confidence 9999999999999999 99999999998765554
No 49
>PRK13688 hypothetical protein; Provisional
Probab=99.21 E-value=1.1e-10 Score=98.32 Aligned_cols=115 Identities=19% Similarity=0.140 Sum_probs=75.4
Q ss_pred EEEcCCcchHHHHHHHHHHhccCCCCccccccccccchhHHhhcCCCceEEEEEECCeEEEEEEEEEeeccccCCCCCCc
Q 019558 8 TRSYDRQIDRARVEDLERRCEVGPAERVFLFTDTLGDPICRIRNSPMYKMLVAELDRELVGVIQGSIKQVTVQKPHEDLA 87 (339)
Q Consensus 8 IR~~~~~~D~~~v~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~VAe~~geiVG~i~~~~~~~~~~~~~~~~~ 87 (339)
||+++ .+|++++.++...++.. ++...++++.+++++||++.+.......-.......
T Consensus 20 ~~~~~-~~dl~~l~~l~~~~f~~---------------------~~~~~~~~~~~~~~~VG~~~l~~~dg~~~~~~~~~~ 77 (156)
T PRK13688 20 FREFG-NQELSMLEELQANIIEN---------------------DSESPFYGIYYGDSLVARMSLYKKGGVEEPYFEDTQ 77 (156)
T ss_pred HHHhc-HHHHHHHHhhhhhEeec---------------------CCCCCEEEEEECCEEEEEEEEEecCCcccccccCCC
Confidence 46667 77777777776666421 122456788889999998876432210000001123
Q ss_pred cEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHHHHhhCCCEEeecC
Q 019558 88 KVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKLFVNKLGYVNFRTP 153 (339)
Q Consensus 88 ~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY~k~GF~~~~~~ 153 (339)
..++|..++|+|+|||+|||++|++.+. +.++. +.+...|. +..+ |+|+||+..+..
T Consensus 78 ~~~~L~~l~V~p~~rgkGiG~~Ll~~a~----~~~~~---~~~~~~~~-a~~F-Y~k~GF~~~~~~ 134 (156)
T PRK13688 78 DYLELWKLEVLPKYQNRGYGEMLVDFAK----SFQLP---IKTIARNK-SKDF-WLKLGFTPVEYK 134 (156)
T ss_pred CeEEEEEEEECHHHcCCCHHHHHHHHHH----HhCCe---EEEEeccc-hHHH-HHhCCCEEeEEe
Confidence 4578999999999999999999998654 33443 23444454 5676 999999987654
No 50
>cd02169 Citrate_lyase_ligase Citrate lyase ligase. Citrate lyase ligase, also known as [Citrate (pro-3S)-lyase] ligase, is responsible for acetylation of the (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) prosthetic group of the gamma subunit of citrate lyase, converting the inactive thiol form of this enzyme to the active form. The acetylation of 1 molecule of deacetyl-citrate lyase to enzymatically active citrate lyase requires 6 molecules of ATP. The Adenylylyltranferase activity of the enzyme involves the formation of AMP and and pyrophosphate in the acetylation reaction.
Probab=99.17 E-value=1.6e-10 Score=107.11 Aligned_cols=78 Identities=17% Similarity=0.219 Sum_probs=65.9
Q ss_pred ceEEEEEECCeEEEEEEEEEeeccccCCCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCC
Q 019558 55 YKMLVAELDRELVGVIQGSIKQVTVQKPHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDN 134 (339)
Q Consensus 55 ~~~~VAe~~geiVG~i~~~~~~~~~~~~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N 134 (339)
..+++.++++++||++.+.. ..|..++|+|+|||+|||++||++++++++++|+..+++.+...|
T Consensus 6 ~~~~v~~~~~~iVG~~~l~~---------------~~I~~vaV~p~~Rg~GiG~~Ll~~l~~~a~~~g~~~i~L~t~~~~ 70 (297)
T cd02169 6 YTVGIFDDAGELIATGSIAG---------------NVLKCVAVCPKYQGEGLALKIVSELINKAYEEGIFHLFLFTKPKN 70 (297)
T ss_pred EEEEEEEECCEEEEEEEecc---------------CEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEcccH
Confidence 34566677899999985521 347889999999999999999999999999999999999987766
Q ss_pred hHHHHHHHhhCCCEEee
Q 019558 135 EASVKLFVNKLGYVNFR 151 (339)
Q Consensus 135 ~~a~~lfY~k~GF~~~~ 151 (339)
.. ||+|+||+..+
T Consensus 71 ~~----fYek~GF~~~~ 83 (297)
T cd02169 71 AK----FFRGLGFKELA 83 (297)
T ss_pred HH----HHHHCCCEEec
Confidence 43 69999999877
No 51
>PF08445 FR47: FR47-like protein; InterPro: IPR013653 Proteins in this entry have a conserved region similar to the C-terminal region of the Drosophila melanogaster (Fruit fly) hypothetical protein FR47 (Q9VR51 from SWISSPROT). This protein has been found to consist of two N-acyltransferase-like domains swapped with the C-terminal strands. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups; PDB: 1SQH_A 3EC4_B.
Probab=99.10 E-value=1.2e-09 Score=82.80 Aligned_cols=61 Identities=34% Similarity=0.608 Sum_probs=52.5
Q ss_pred EEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHHHHhhCCCEEeec
Q 019558 90 GYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKLFVNKLGYVNFRT 152 (339)
Q Consensus 90 ~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY~k~GF~~~~~ 152 (339)
+.|..+.|.|+|||+|+|+.|+..+.+.+.++|.. ..+.+..+|.+|+++ |+|+||+....
T Consensus 22 g~i~~v~t~p~~RrrGlg~~lv~~l~~~~~~~g~~-~~l~v~~~N~~s~~l-y~klGf~~~~~ 82 (86)
T PF08445_consen 22 GEIGGVYTLPEHRRRGLGSALVAALARELLERGKT-PFLYVDADNEASIRL-YEKLGFREIEE 82 (86)
T ss_dssp CCEEEEEE-GGGTTSSHHHHHHHHHHHHHHHTTSE-EEEEEETT-HHHHHH-HHHCT-EEEEE
T ss_pred cEEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCCc-EEEEEECCCHHHHHH-HHHcCCEEEEE
Confidence 67889999999999999999999999999998875 567799999999999 99999998754
No 52
>KOG2488 consensus Acetyltransferase (GNAT) domain-containing protein [General function prediction only]
Probab=99.06 E-value=1.6e-09 Score=91.44 Aligned_cols=92 Identities=24% Similarity=0.260 Sum_probs=78.6
Q ss_pred CCceEEEEEECC-eEEEEEEEEEeeccccCCCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEec
Q 019558 53 PMYKMLVAELDR-ELVGVIQGSIKQVTVQKPHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATE 131 (339)
Q Consensus 53 ~~~~~~VAe~~g-eiVG~i~~~~~~~~~~~~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~ 131 (339)
....+++|..++ ++|||++.....+. ...+.|+..+-|.++|||+|||+.||+.++..+..+...++.|+|.
T Consensus 90 ~~~~Yi~a~~~~~~~vgf~~Frf~vd~-------g~~vlYcyEvqv~~~yR~kGiGk~LL~~l~~~a~~~~~~kVmLTVf 162 (202)
T KOG2488|consen 90 RKLRYICAWNNKSKLVGFTMFRFTVDT-------GDPVLYCYEVQVASAYRGKGIGKFLLDTLEKLADSRHMRKVMLTVF 162 (202)
T ss_pred ccceEEEEEcCCCceeeEEEEEEEccc-------CCeEEEEEEEeehhhhhccChHHHHHHHHHHHHHHHHhhhheeeee
Confidence 336778888775 99999988654422 2457999999999999999999999999999999999999999999
Q ss_pred cCChHHHHHHHhhCCCEEeec
Q 019558 132 KDNEASVKLFVNKLGYVNFRT 152 (339)
Q Consensus 132 ~~N~~a~~lfY~k~GF~~~~~ 152 (339)
..|.+|+.| |.++||.....
T Consensus 163 ~~N~~al~F-y~~~gf~~~~~ 182 (202)
T KOG2488|consen 163 SENIRALGF-YHRLGFVVDEE 182 (202)
T ss_pred cccchhHHH-HHHcCcccCCC
Confidence 999999998 99999987443
No 53
>TIGR00124 cit_ly_ligase [citrate (pro-3S)-lyase] ligase. ATP is cleaved to AMP and pyrophosphate during the reaction. The carboxyl end is homologous to a number of cytidyltransferases that also release pyrophosphate.
Probab=98.97 E-value=4.4e-09 Score=98.99 Aligned_cols=80 Identities=14% Similarity=0.155 Sum_probs=68.4
Q ss_pred ceEEEEEECCeEEEEEEEEEeeccccCCCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCC
Q 019558 55 YKMLVAELDRELVGVIQGSIKQVTVQKPHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDN 134 (339)
Q Consensus 55 ~~~~VAe~~geiVG~i~~~~~~~~~~~~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N 134 (339)
..+++++++|+|||++.+. + ..|..++|+|+|||+|+|++||.++++.++++|...+.+.|.+.|
T Consensus 31 d~~vv~~~~~~lVg~g~l~--------g-------~~ik~vaV~~~~rG~Glg~~L~~~L~~~a~~~G~~~l~l~Tk~~~ 95 (332)
T TIGR00124 31 EIFIAVYEDEEIIGCGGIA--------G-------NVIKCVAIDESLRGEGLALQLMTELENLAYELGRFHLFIFTKPEY 95 (332)
T ss_pred CEEEEEEECCEEEEEEEEe--------c-------CEEEEEEEcHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEECchH
Confidence 5677888899999998651 1 247789999999999999999999999999999999999998776
Q ss_pred hHHHHHHHhhCCCEEeecC
Q 019558 135 EASVKLFVNKLGYVNFRTP 153 (339)
Q Consensus 135 ~~a~~lfY~k~GF~~~~~~ 153 (339)
.. ||+++||......
T Consensus 96 ~~----fy~klGF~~i~~~ 110 (332)
T TIGR00124 96 AA----LFEYCGFKTLAEA 110 (332)
T ss_pred HH----HHHHcCCEEeeee
Confidence 54 5999999987753
No 54
>KOG3138 consensus Predicted N-acetyltransferase [General function prediction only]
Probab=98.93 E-value=2.3e-09 Score=91.85 Aligned_cols=139 Identities=18% Similarity=0.208 Sum_probs=95.6
Q ss_pred EEEEEcCCcchHHHHHHHHHHhccCCCCccccccccccchhHHhhcCCCceEEEEEECCeEEEEEEEEEeeccccCC-CC
Q 019558 6 VITRSYDRQIDRARVEDLERRCEVGPAERVFLFTDTLGDPICRIRNSPMYKMLVAELDRELVGVIQGSIKQVTVQKP-HE 84 (339)
Q Consensus 6 i~IR~~~~~~D~~~v~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~VAe~~geiVG~i~~~~~~~~~~~~-~~ 84 (339)
+.++..+ +.++.++..|.+.++... ....++.+ ........-+ |..++..||.+......... + .+
T Consensus 17 ~~l~~it-~~nl~~~~~l~~~~fP~~-y~~kfy~~--------~~~~~~~~~~-A~~~~~~v~a~~~k~~~~~~--~~~r 83 (187)
T KOG3138|consen 17 IELRLIT-PNNLKQLKQLNEDIFPIS-YVDKFYPD--------VLSNGDLTQL-AYYNEIAVGAVACKLIKFVQ--NAKR 83 (187)
T ss_pred eeeccCC-cchHHHHHHHhccccCcc-hHHHHHHH--------HHhcCCHHHh-hhhccccccceeeeehhhhh--hhhh
Confidence 8899999 999999999988876322 11112221 2222211222 33334445544443322111 0 01
Q ss_pred C-CccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCC-CcEEEEEeccCChHHHHHHHhhCCCEEeecCeeeec
Q 019558 85 D-LAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSND-VDYAYMATEKDNEASVKLFVNKLGYVNFRTPAILVH 158 (339)
Q Consensus 85 ~-~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g-~~~i~l~v~~~N~~a~~lfY~k~GF~~~~~~~~~~~ 158 (339)
. ..+++||..+.|.|.||.+|||+.|++.+.+.+.... ++.+++++...|..++.+ |++.||+.......+..
T Consensus 84 ~~~~~~~yi~~Lgvl~~yR~~gIGs~Ll~~~~~~~~~~~~~~~v~lHv~~~n~~ai~~-Y~~~gF~~~~~~~~~y~ 158 (187)
T KOG3138|consen 84 LFGNRVIYILSLGVLPRYRNKGIGSKLLEFVKKYCSEAHQCRRVYLHVQAVNESAIEF-YEKRGFEIVERLKNYYS 158 (187)
T ss_pred hhccceeEEEeecccHHHHhcchHHHHHHHHHHHHhcccccceEEEEEEeCCCcHHHH-HHhcCceEeeccccccc
Confidence 0 0125899999999999999999999999999999887 888999999999999998 99999999888755544
No 55
>COG3981 Predicted acetyltransferase [General function prediction only]
Probab=98.90 E-value=2e-08 Score=83.75 Aligned_cols=141 Identities=18% Similarity=0.191 Sum_probs=92.8
Q ss_pred CeEEEEEcCCcchHHHHHHHHHHhccCCC---Ccccc---ccccccchhHHhhc------C-----CCceEEEEEECCeE
Q 019558 4 GEVITRSYDRQIDRARVEDLERRCEVGPA---ERVFL---FTDTLGDPICRIRN------S-----PMYKMLVAELDREL 66 (339)
Q Consensus 4 ~~i~IR~~~~~~D~~~v~~L~~~~~~~~~---~~~~~---~~~~~~~~l~~~~~------~-----~~~~~~VAe~~gei 66 (339)
..|.++..+ ..|.+++.+....-..... ...+. ..+.+.+.+..+.. . |...+|....++++
T Consensus 2 e~~~l~~p~-L~~k~a~le~~~e~~~~~~~~~~~~~~~~~~~~~fed~L~~~~~~~~~~~~~~g~V~~~~y~~v~~d~~i 80 (174)
T COG3981 2 EEMKLRRPT-LKDKDAFLEMKKEFLTDGSTEAGAAWKADYEQEDFEDWLEDLTRQEPGNNLPEGWVPASTYWAVDEDGQI 80 (174)
T ss_pred CcccccCCc-hhhHHHHHHHHHhhhhcCCcccCceeecccccccHHHHHHHHhccCCCcCCCCCceeceeEEEEecCCcE
Confidence 457788888 8899988887665421111 10000 01223333333211 1 11223333446999
Q ss_pred EEEEEEEEeeccccCCCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHHHHhhCC
Q 019558 67 VGVIQGSIKQVTVQKPHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKLFVNKLG 146 (339)
Q Consensus 67 VG~i~~~~~~~~~~~~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY~k~G 146 (339)
||++.+...-.... .... ++| +..|.|+.||||+|+++++.+++.|++.|++++.+++..+|.+|.+. -+++|
T Consensus 81 vG~i~lRh~Ln~~l--l~~g---GHI-GY~VrPseR~KGYA~emLkl~L~~ar~lgi~~Vlvtcd~dN~ASrkv-I~~NG 153 (174)
T COG3981 81 VGFINLRHQLNDFL--LEEG---GHI-GYSVRPSERRKGYAKEMLKLALEKARELGIKKVLVTCDKDNIASRKV-IEANG 153 (174)
T ss_pred EEEEEeeeecchHH--HhcC---Ccc-cceeChhhhccCHHHHHHHHHHHHHHHcCCCeEEEEeCCCCchhhHH-HHhcC
Confidence 99998755443220 0112 333 44699999999999999999999999999999999999999999999 99999
Q ss_pred CEEeec
Q 019558 147 YVNFRT 152 (339)
Q Consensus 147 F~~~~~ 152 (339)
=....+
T Consensus 154 Gile~~ 159 (174)
T COG3981 154 GILENE 159 (174)
T ss_pred CEEeEE
Confidence 876544
No 56
>COG1670 RimL Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]
Probab=98.89 E-value=5.4e-08 Score=83.03 Aligned_cols=141 Identities=18% Similarity=0.080 Sum_probs=90.5
Q ss_pred CeEEEEEcCCcchHHHHHHHHHHhccCC--CCcc----ccccccccchhHHhhcCCCceEEEEE--EC--CeEEEEEEEE
Q 019558 4 GEVITRSYDRQIDRARVEDLERRCEVGP--AERV----FLFTDTLGDPICRIRNSPMYKMLVAE--LD--RELVGVIQGS 73 (339)
Q Consensus 4 ~~i~IR~~~~~~D~~~v~~L~~~~~~~~--~~~~----~~~~~~~~~~l~~~~~~~~~~~~VAe--~~--geiVG~i~~~ 73 (339)
..+.+|+.. ..|+..+..+........ .... ......+...+...........++.. .+ +++||.+...
T Consensus 8 ~r~~lr~~~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~~~~ 86 (187)
T COG1670 8 LRLLLREVD-LEDLELLAEWANDPEVMLFWWLPPPLTPPTSDEELLRLLAEAWEDLGGGAFAIELKATGDGELIGVIGLS 86 (187)
T ss_pred ceeEeecCc-HhHHHHHHHHhcChHhhcccCCCCCcccccchHHHHHHHHHHHhhcCCceEEEEEEeCCCCeEEEEEEEE
Confidence 356778778 888888875543321111 1111 11111222223332333333333332 22 4899999775
Q ss_pred EeeccccCCCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHh-CCCcEEEEEeccCChHHHHHHHhhCCCEEeec
Q 019558 74 IKQVTVQKPHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTS-NDVDYAYMATEKDNEASVKLFVNKLGYVNFRT 152 (339)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~-~g~~~i~l~v~~~N~~a~~lfY~k~GF~~~~~ 152 (339)
.... . .... ....++.+.|+|||+|+|++.+..+++++.+ .++..+.+.+...|.+|+++ ++|+||+..+.
T Consensus 87 ~~~~-~-----~~~~-~~~ig~~l~~~~~g~G~~tea~~~~l~~~f~~~~l~ri~~~~~~~N~~S~rv-~ek~Gf~~eg~ 158 (187)
T COG1670 87 DIDR-A-----ANGD-LAEIGYWLDPEYWGKGYATEALRALLDYAFEELGLHRIEATVDPENEASIRV-YEKLGFRLEGE 158 (187)
T ss_pred Eecc-c-----cccc-eEEEEEEEChHHhcCchHHHHHHHHHHHhhhhcCceEEEEEecCCCHHHHHH-HHHcCChhhhh
Confidence 4431 0 0011 2334555799999999999999999999888 69999999999999999999 99999998775
Q ss_pred C
Q 019558 153 P 153 (339)
Q Consensus 153 ~ 153 (339)
.
T Consensus 159 ~ 159 (187)
T COG1670 159 L 159 (187)
T ss_pred h
Confidence 4
No 57
>COG3393 Predicted acetyltransferase [General function prediction only]
Probab=98.86 E-value=1.4e-08 Score=90.49 Aligned_cols=80 Identities=16% Similarity=0.272 Sum_probs=66.8
Q ss_pred CCeEEEEEEEEEeeccccCCCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHHHH
Q 019558 63 DRELVGVIQGSIKQVTVQKPHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKLFV 142 (339)
Q Consensus 63 ~geiVG~i~~~~~~~~~~~~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY 142 (339)
+|+||..+...... ...+-|.+++|+|+|||||+|++|+..+.+..-+.|.. ..|.+..+|+.|.+. |
T Consensus 185 d~~iVa~A~t~a~~----------~~~~~I~gV~T~peyR~kGyAt~lva~L~~~lL~eGk~-~~L~~~~~N~~A~~i-Y 252 (268)
T COG3393 185 DGKIVAKAETAAEN----------PAYAQINGVYTHPEYRGKGYATALVATLAAKLLAEGKI-PCLFVNSDNPVARRI-Y 252 (268)
T ss_pred CCcEEEeeeccccC----------CcceEEEEEEcCHHHccccHHHHHHHHHHHHHHhCCCe-eEEEEecCCHHHHHH-H
Confidence 45999999554333 23488999999999999999999999999988888864 456678999999999 9
Q ss_pred hhCCCEEeecCe
Q 019558 143 NKLGYVNFRTPA 154 (339)
Q Consensus 143 ~k~GF~~~~~~~ 154 (339)
+|.||+..++..
T Consensus 253 ~riGF~~~g~~~ 264 (268)
T COG3393 253 QRIGFREIGEFR 264 (268)
T ss_pred HHhCCeecceEE
Confidence 999999988643
No 58
>KOG3397 consensus Acetyltransferases [General function prediction only]
Probab=98.75 E-value=2.2e-08 Score=83.10 Aligned_cols=88 Identities=23% Similarity=0.327 Sum_probs=68.1
Q ss_pred ceEEEEEECCeEEEEEEEEEeeccccCCCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCC
Q 019558 55 YKMLVAELDRELVGVIQGSIKQVTVQKPHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDN 134 (339)
Q Consensus 55 ~~~~VAe~~geiVG~i~~~~~~~~~~~~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N 134 (339)
..++.-|...++||-..+..-. ......++..+.|+.++||+|.|+.||+.++.|++.+|++.+++++..+.
T Consensus 57 sL~Ll~E~~~~VigH~rLS~i~--------n~~~al~VEsVVV~k~~RG~GFGk~lMk~~E~~~R~~gf~~~yLsT~DQ~ 128 (225)
T KOG3397|consen 57 SLLLLNEENDEVLGHSRLSHLP--------NRDHALWVESVVVKKDQRGLGFGKFLMKSTEKWMREKGFNEAYLSTDDQC 128 (225)
T ss_pred eeeeecccccceeeeeccccCC--------CCCceeEEEEEEEehhhccccHHHHHHHHHHHHHHHhhhhheeeecccch
Confidence 3444455567899988653222 12244788999999999999999999999999999999999999876654
Q ss_pred hHHHHHHHhhCCCEEeecCee
Q 019558 135 EASVKLFVNKLGYVNFRTPAI 155 (339)
Q Consensus 135 ~~a~~lfY~k~GF~~~~~~~~ 155 (339)
. ||+++||+.....+.
T Consensus 129 ~-----FYe~lGYe~c~Pi~~ 144 (225)
T KOG3397|consen 129 R-----FYESLGYEKCDPIVH 144 (225)
T ss_pred h-----hhhhhcccccCceec
Confidence 3 799999997655443
No 59
>TIGR01211 ELP3 histone acetyltransferase, ELP3 family. The Saccharomyces cerevisiae member YPL086C has been characterized in vitro as an N-terminal acetyltransferase for all four core histones. It is a component of the RNA polymerase II holoenzyme, designated Elp3p for Elongator Protein 3. Members of this family are found in eukaryotes and archaea. These proteins are part of the larger set of GNAT acetyltransferases.
Probab=98.62 E-value=3e-07 Score=91.42 Aligned_cols=92 Identities=14% Similarity=0.192 Sum_probs=67.5
Q ss_pred ceEEEEEE---CCeEEEEEEEEEeeccccCCCCCCccEEEEEEEEe-----------CcccccCCHHHHHHHHHHHHHHh
Q 019558 55 YKMLVAEL---DRELVGVIQGSIKQVTVQKPHEDLAKVGYVLGLRV-----------APLHRRKGIGSSLVCKLEEWFTS 120 (339)
Q Consensus 55 ~~~~VAe~---~geiVG~i~~~~~~~~~~~~~~~~~~~~~I~~l~V-----------~P~~RgkGIG~~Ll~~~~~~a~~ 120 (339)
.-.|..+. ++.+||++.+.......+ .......++|..|.| +|+|||+|||++||+++++++++
T Consensus 411 ~e~F~~y~~~~~~~l~G~lrlr~~~~~~~--~~~~~~~a~IrelhV~G~~~~~~~~~~~~~rg~GiG~~Ll~~ae~~Ar~ 488 (522)
T TIGR01211 411 TEFFLSYEDPKNDILIGFLRLRFPSEPAH--RKEVDATALVRELHVYGSEVPIGERGDDEWQHRGYGRRLLEEAERIAAE 488 (522)
T ss_pred CeEEEEEEcCCCCeEEEEEEEecCccccc--ccccCCCceEEEEEEeeeeccccccCChhHhCcCHHHHHHHHHHHHHHH
Confidence 34455554 478999998876543221 011122466666664 49999999999999999999999
Q ss_pred CCCcEEEEEeccCChHHHHHHHhhCCCEEeec
Q 019558 121 NDVDYAYMATEKDNEASVKLFVNKLGYVNFRT 152 (339)
Q Consensus 121 ~g~~~i~l~v~~~N~~a~~lfY~k~GF~~~~~ 152 (339)
.|++.+.+.+ |..++++ |+|+||...+.
T Consensus 489 ~G~~~i~v~s---~~~A~~F-Y~klGf~~~g~ 516 (522)
T TIGR01211 489 EGSEKILVIS---GIGVREY-YRKLGYELDGP 516 (522)
T ss_pred CCCCEEEEee---CchHHHH-HHHCCCEEEcc
Confidence 9999988643 6778887 99999998665
No 60
>COG2153 ElaA Predicted acyltransferase [General function prediction only]
Probab=98.60 E-value=2.2e-07 Score=75.35 Aligned_cols=87 Identities=21% Similarity=0.195 Sum_probs=62.4
Q ss_pred ceEEEEEECCeEEEEEEEEEeeccccCCCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCC-CcEEEEEeccC
Q 019558 55 YKMLVAELDRELVGVIQGSIKQVTVQKPHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSND-VDYAYMATEKD 133 (339)
Q Consensus 55 ~~~~VAe~~geiVG~i~~~~~~~~~~~~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g-~~~i~l~v~~~ 133 (339)
.+.++-..+|++|+++.+...... +.+ ..|+.++|+|++||+|+|++||+.+++.+.+.. -+.+++..
T Consensus 50 ~Hl~~~~~~g~LvAyaRLl~~~~~-------~~~-~~iGRV~v~~~~RG~glG~~Lm~~AL~~~~~~~p~~~v~l~A--- 118 (155)
T COG2153 50 RHLLGWTPDGELVAYARLLPPGAE-------YEE-VSIGRVIVSPAARGQGLGQQLMEKALETAGREWPDKPVYLGA--- 118 (155)
T ss_pred ceEEEEcCCCeEEEEEecCCCCCC-------cCc-eeeeeEEECHhhhccchhHHHHHHHHHHHHhhCCCCCeEEeh---
Confidence 444544448999999977544322 222 669999999999999999999999999998864 22333332
Q ss_pred ChHHHHHHHhhCCCEEeecC
Q 019558 134 NEASVKLFVNKLGYVNFRTP 153 (339)
Q Consensus 134 N~~a~~lfY~k~GF~~~~~~ 153 (339)
.+-+.-||.++||+..+..
T Consensus 119 -QahLq~fYa~~GFv~~~e~ 137 (155)
T COG2153 119 -QAHLQDFYASFGFVRVGEE 137 (155)
T ss_pred -HHHHHHHHHHhCcEEcCch
Confidence 2223446999999987663
No 61
>cd04301 NAT_SF N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate. NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, ranging from bacterial antibiotic resistance to circadian rhythms in mammals. Members include GCN5-related N-Acetyltransferases (GNAT) such as Aminoglycoside N-acetyltransferases, Histone N-acetyltransferase (HAT) enzymes, and Serotonin N-acetyltransferase, which catalyze the transfer of an acetyl group to a substrate. The kinetic mechanism of most GNATs involves the ordered formation of a ternary complex: the reaction begins with Acetyl Coenzyme A (AcCoA) binding, followed by binding of substrate, then direct transfer of the acetyl group from AcCoA to the substrate, followed by product and subsequent CoA release. Other family members include Arginine/ornithine N-succinyltransfera
Probab=98.60 E-value=3.1e-07 Score=63.24 Aligned_cols=63 Identities=35% Similarity=0.334 Sum_probs=52.2
Q ss_pred EEEEECCeEEEEEEEEEeeccccCCCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEE
Q 019558 58 LVAELDRELVGVIQGSIKQVTVQKPHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYM 128 (339)
Q Consensus 58 ~VAe~~geiVG~i~~~~~~~~~~~~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l 128 (339)
++++.++++||++.+..... .....++..+.|+|+|||+|+|++|++.+++++.+.|.+.+.+
T Consensus 2 ~~~~~~~~~ig~~~~~~~~~--------~~~~~~l~~~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~ 64 (65)
T cd04301 2 LVAEDDGEIVGFASLSPDGS--------GGDTAYIGDLAVLPEYRGKGIGSALLEAAEEEARERGAKRLRL 64 (65)
T ss_pred EEEecCCEEEEEEEEEecCC--------CCccEEEEEEEECHHHcCcCHHHHHHHHHHHHHHHcCCcEEEe
Confidence 45667899999998866542 1234888889999999999999999999999999988887765
No 62
>PF13718 GNAT_acetyltr_2: GNAT acetyltransferase 2; PDB: 2ZPA_B.
Probab=98.51 E-value=1.8e-06 Score=74.91 Aligned_cols=106 Identities=23% Similarity=0.298 Sum_probs=70.0
Q ss_pred hhHHhhcCCCceEEEEEECC--eEEEEEEEEEeeccc-------------cCCC------------C--CCccEEEEEEE
Q 019558 45 PICRIRNSPMYKMLVAELDR--ELVGVIQGSIKQVTV-------------QKPH------------E--DLAKVGYVLGL 95 (339)
Q Consensus 45 ~l~~~~~~~~~~~~VAe~~g--eiVG~i~~~~~~~~~-------------~~~~------------~--~~~~~~~I~~l 95 (339)
.+..+...|....+++..++ +|+|++.+...+.-. -.|+ . ......-|..+
T Consensus 17 DL~~LlDaP~h~l~~l~~~~~p~il~~~~v~~EG~l~~~l~~~i~~g~rRp~G~LiP~~L~~~~~~~~f~~l~g~RIvRI 96 (196)
T PF13718_consen 17 DLQLLLDAPNHRLFVLLQPGDPDILGVAQVALEGGLSKELIEAILSGGRRPKGHLIPQTLAQHFGDPEFAQLSGARIVRI 96 (196)
T ss_dssp HHHHHHH-TTEEEEEEE-SS--SEEEEEEEEEEE---HHHHHHHHTTS---SS-HHHHHHHHHSS-TTGGGSEEEEEEEE
T ss_pred HHHHHhcCCcceeehhccCCCceEEEEEEEEecCCCCHHHHHHHHhCCCCCCCCCHHHHHHHHhCCHHHHhhcceeEEEE
Confidence 47777888999999999998 999999998766321 0111 1 12245668999
Q ss_pred EeCcccccCCHHHHHHHHHHHHH-------------------------HhCCCcEEEEEeccCChHHHHHHHhhCCCEEe
Q 019558 96 RVAPLHRRKGIGSSLVCKLEEWF-------------------------TSNDVDYAYMATEKDNEASVKLFVNKLGYVNF 150 (339)
Q Consensus 96 ~V~P~~RgkGIG~~Ll~~~~~~a-------------------------~~~g~~~i~l~v~~~N~~a~~lfY~k~GF~~~ 150 (339)
+|+|++|++|||++|++.+++++ +..+++++-..-.. +..-++ |+.|+||.++
T Consensus 97 AvhP~~q~~G~Gs~lL~~l~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~vDylGtSFG~-t~~Ll~-FW~k~gf~pv 174 (196)
T PF13718_consen 97 AVHPDLQRMGYGSRLLQQLEQYAEGKIPSLSEQDKEKLPPLLSKLSDRRPPGVDYLGTSFGA-TPELLK-FWQKNGFVPV 174 (196)
T ss_dssp EE-CCC-SSSHHHHHHHHHHHT-----------------------------S-SEEEEEEE---HHHHH-HHHCTT-EEE
T ss_pred EEChhhhcCCHHHHHHHHHHHHHhhhcccccccccccccccccccccccccCCCEEEeccCC-CHHHHH-HHHHCCcEEE
Confidence 99999999999999999999999 46688877665444 344455 4999999986
Q ss_pred ec
Q 019558 151 RT 152 (339)
Q Consensus 151 ~~ 152 (339)
+-
T Consensus 175 ~l 176 (196)
T PF13718_consen 175 YL 176 (196)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 63
>PF12746 GNAT_acetyltran: GNAT acetyltransferase; PDB: 3G3S_B.
Probab=98.49 E-value=1.5e-06 Score=79.07 Aligned_cols=88 Identities=18% Similarity=0.125 Sum_probs=62.9
Q ss_pred ceEEEEEECCeEEEEEEEEEeeccccCCCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCC
Q 019558 55 YKMLVAELDRELVGVIQGSIKQVTVQKPHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDN 134 (339)
Q Consensus 55 ~~~~VAe~~geiVG~i~~~~~~~~~~~~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N 134 (339)
+.-+++..+|+||+.+........ +.--.+.++|+|||||+|+.+...++..|.++|..-.+ .+ .|
T Consensus 165 G~Gf~i~~~~~iVs~~~s~~~~~~-----------~~EI~I~T~~~yR~kGLA~~~aa~~I~~Cl~~~l~P~W-Dc--~N 230 (265)
T PF12746_consen 165 GFGFCILHDGEIVSGCSSYFVYEN-----------GIEIDIETHPEYRGKGLATAVAAAFILECLENGLYPSW-DC--HN 230 (265)
T ss_dssp --EEEEEETTEEEEEEEEEEEETT-----------EEEEEEEE-CCCTTSSHHHHHHHHHHHHHHHTT-EEE--EE--SS
T ss_pred CcEEEEEECCEEEEEEEEEEEECC-----------EEEEEEEECHHhhcCCHHHHHHHHHHHHHHHCCCCcCe-eC--CC
Confidence 345777789999976655433311 33347889999999999999999999999999975433 23 69
Q ss_pred hHHHHHHHhhCCCEEeecCeeee
Q 019558 135 EASVKLFVNKLGYVNFRTPAILV 157 (339)
Q Consensus 135 ~~a~~lfY~k~GF~~~~~~~~~~ 157 (339)
.+|+++ -+|+||+.......+.
T Consensus 231 ~~S~~l-A~kLGf~~~~~Y~~Y~ 252 (265)
T PF12746_consen 231 LASIAL-AEKLGFHFDFEYTAYE 252 (265)
T ss_dssp HHHHHH-HHHCT--EEEEEEEE-
T ss_pred HHHHHH-HHHcCCcccceeeeee
Confidence 999999 9999999988766553
No 64
>KOG4135 consensus Predicted phosphoglucosamine acetyltransferase [Carbohydrate transport and metabolism]
Probab=98.47 E-value=4.4e-06 Score=67.90 Aligned_cols=150 Identities=17% Similarity=0.123 Sum_probs=99.7
Q ss_pred CeEEEEEcCCcchHHHHHHHHHHhccCCCC-ccccccccccchhHHhhcCCCceEEEEEE---C--C-----eEEEEEEE
Q 019558 4 GEVITRSYDRQIDRARVEDLERRCEVGPAE-RVFLFTDTLGDPICRIRNSPMYKMLVAEL---D--R-----ELVGVIQG 72 (339)
Q Consensus 4 ~~i~IR~~~~~~D~~~v~~L~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~VAe~---~--g-----eiVG~i~~ 72 (339)
..+.+.|++ +.+.+...+|+...+...-. ...+..+.--+.-+..+.+.....|+..+ + + ..||-+-+
T Consensus 12 ~kvILVPYe-~~HV~kYHeWMknEelr~LT~SE~LtLdeEyeMQ~sW~~DeDKlTFIVLdaE~~ea~~~ev~~MvGDvNl 90 (185)
T KOG4135|consen 12 KKVILVPYE-PCHVPKYHEWMKNEELRRLTASEPLTLDEEYEMQKSWREDEDKLTFIVLDAEMNEAGEDEVDHMVGDVNL 90 (185)
T ss_pred ceEEEeecc-ccchhHHHhHhhhHHHHHhhcCCCcchhHHHHhhhhhccCCcceEEEEEechhcccCchhHhhhccceee
Confidence 357889999 99999999998776432210 01111111001112234555444444432 1 2 35776655
Q ss_pred EEeeccccCCCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHh-CCCcEEEEEeccCChHHHHHHHhhCCCEEee
Q 019558 73 SIKQVTVQKPHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTS-NDVDYAYMATEKDNEASVKLFVNKLGYVNFR 151 (339)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~-~g~~~i~l~v~~~N~~a~~lfY~k~GF~~~~ 151 (339)
.+..............++.+.-++-.|..||+|||++.+..++.|+.. .++.+....+..+|.+++++ +.|++|..+.
T Consensus 91 Flt~~~~~~n~s~~~~~gE~EvMIAEP~~RgKG~G~eav~~ml~y~~s~l~l~Ky~vkig~~nk~sl~l-Fkk~~f~q~~ 169 (185)
T KOG4135|consen 91 FLTTSPDTENPSDDVITGEVEVMIAEPRGRGKGIGTEAVRAMLAYAYSVLKLDKYEVKIGMDNKPSLRL-FKKFLFTQVF 169 (185)
T ss_pred EEecCCCcCCcccceeeeeEEEEEecccccCCCccHHHHHHHHHHHHHHhhhheEEEEecCCCchHHHH-HHHhhheeee
Confidence 554433211122334678888889999999999999999999999987 48888899999999999999 9999999877
Q ss_pred cCee
Q 019558 152 TPAI 155 (339)
Q Consensus 152 ~~~~ 155 (339)
....
T Consensus 170 ~ns~ 173 (185)
T KOG4135|consen 170 YNSS 173 (185)
T ss_pred eecc
Confidence 6443
No 65
>PF12568 DUF3749: Acetyltransferase (GNAT) domain; InterPro: IPR024612 This domain is found in uncharacterised proteins from Gammaproteobacteria, and is approximately 40 amino acids in length. It contains two completely conserved residues (D and I) that may be functionally important. Proteins having this domain are frequently annotated as acetyltransferases of the GNAT family; however there is little accompanying annotation to confirm this.; PDB: 2K5T_A.
Probab=98.45 E-value=1.2e-05 Score=64.39 Aligned_cols=84 Identities=20% Similarity=0.365 Sum_probs=62.0
Q ss_pred CceEEEEEECCeEEEEEEEEEeeccccCCCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEec--
Q 019558 54 MYKMLVAELDRELVGVIQGSIKQVTVQKPHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATE-- 131 (339)
Q Consensus 54 ~~~~~VAe~~geiVG~i~~~~~~~~~~~~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~-- 131 (339)
....|+|.-+++++|.+.+...+ ..+.+..++|++.-||+|+|+.|++.+.+.+ -+++...+...
T Consensus 37 ~~~l~aArFNdRlLgAv~v~~~~-----------~~~~L~~l~VRevTRrRGVG~yLlee~~rq~--p~i~~w~l~~~~~ 103 (128)
T PF12568_consen 37 GHRLFAARFNDRLLGAVKVTISG-----------QQAELSDLCVREVTRRRGVGLYLLEEVLRQL--PDIKHWWLADEGV 103 (128)
T ss_dssp SEEEEEEEETTEEEEEEEEEEET-----------TEEEEEEEEE-TT-SSSSHHHHHHHHHHHHS---S--EEEE--TT-
T ss_pred CCeEEEEEechheeeeEEEEEcC-----------cceEEeeEEEeeccccccHHHHHHHHHHHHC--CCCcEEEEecCCC
Confidence 47889999999999999776543 2388999999999999999999999999877 34555666543
Q ss_pred -cCChHHHHHHHhhCCCEEe
Q 019558 132 -KDNEASVKLFVNKLGYVNF 150 (339)
Q Consensus 132 -~~N~~a~~lfY~k~GF~~~ 150 (339)
..+.+++..|...+||...
T Consensus 104 ~~~~~~~~~~Fm~a~GF~~~ 123 (128)
T PF12568_consen 104 EPQDRAVMAAFMQACGFSAQ 123 (128)
T ss_dssp S--THHHHHHHHHHHT-EE-
T ss_pred cccchHHHHHHHHHcCcccc
Confidence 4578889999999999764
No 66
>COG4552 Eis Predicted acetyltransferase involved in intracellular survival and related acetyltransferases [General function prediction only]
Probab=98.35 E-value=3e-06 Score=78.39 Aligned_cols=221 Identities=17% Similarity=0.142 Sum_probs=129.7
Q ss_pred ceEEEEEECCeEEEEEEEEEeeccccCCCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCC
Q 019558 55 YKMLVAELDRELVGVIQGSIKQVTVQKPHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDN 134 (339)
Q Consensus 55 ~~~~VAe~~geiVG~i~~~~~~~~~~~~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N 134 (339)
...+|.+++.++++........... .....++++|.++++.|+|||+|..++|+.+.++..+++|+...+|+ +.+
T Consensus 39 ~n~~vi~~nqkl~s~L~i~~f~~~f---~~q~l~t~GIa~Vas~P~~R~~G~~~~Ll~~sLre~~~kG~p~s~L~--P~s 113 (389)
T COG4552 39 PNSYVIYMNQKLASRLHIPPFIFWF---GNQVLPTAGIAGVASAPTYRRRGALRALLAHSLREIARKGYPVSALH--PFS 113 (389)
T ss_pred CcceEEeehhhhhhcccccchheee---CCeeeeccceEEEEechhhccCcHHHHHHHHHHHHHHHcCCeeEEec--cCc
Confidence 3468888899999888554333222 12344678999999999999999999999999999999999766554 454
Q ss_pred hHHHHHHHhhCCCEEeecCeeeeccc-cc-ccccCC-------CceeEeecCHHHHHHHHHHhccCCCCCCCChhhhhhc
Q 019558 135 EASVKLFVNKLGYVNFRTPAILVHPV-NN-RMFHTP-------SNVQIRKLRIEEAENLYYKFMASTEFFPYDIGNILRN 205 (339)
Q Consensus 135 ~~a~~lfY~k~GF~~~~~~~~~~~p~-~~-~~~~~~-------~~~~i~~l~~~da~~l~~~~~~~~~~~p~d~~~~L~~ 205 (339)
.+ ||+|+||+.+.+.......+ .. ..+..| .+...+++...+...+|..-.+... ---||+..+=.
T Consensus 114 ~~----iYrKfGye~asn~~~~~~d~~~~~~~a~~p~~~~~~~~~~~~~~~~~~el~kIY~~~~q~~~-G~L~R~~~~W~ 188 (389)
T COG4552 114 GG----IYRKFGYEYASNYHELTFDVRKARFHADEPGGGLGGSSVRLNRPTEHRELEKIYEEWAQQVP-GYLDRPPVLWD 188 (389)
T ss_pred hh----hHhhccccccceEEEeecchHHHHhhccCCcccccchhhhhcCcchHHHHHHHHHHHHhhCC-CcccCCHHHHH
Confidence 44 59999999988754433322 11 111222 2233455666677778887766532 22355555433
Q ss_pred cCCcc--eEEEeeeCCcccccCCCCCCCCCceEEEEEEecCcceeccC-CCChHHHHHHHHHhhhhccccCCCCceEEEE
Q 019558 206 KLSLG--TWVAYPRGEIVGEFGSNGQIFPKSWAMVSVWNSGELFKLRE-GPLSGKMVRTLCQFVHNMAGTKSKDCKVIVT 282 (339)
Q Consensus 206 ~l~~g--t~~a~~~~~~~~~~~~~~~~~~~~~a~~svw~~~~~~~l~~-~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 282 (339)
++... +-....+.. .. ...|.+|....|-+. .++++| -.-......+|+++.-+... - ..=|-.
T Consensus 189 ~l~ke~~~~~~~~~e~----~k---~~~p~GYily~~~~~--~~~IrE~vaLt~~A~~alw~fI~~h~s--m--~~~IS~ 255 (389)
T COG4552 189 KLLKECKAAPGYDRES----GK---LLHPDGYILYRVDRT--LARIRELVALTAEAHQALWRFIIGHDS--M--ERNISI 255 (389)
T ss_pred HHHHhhhhhhhhhhhc----cc---ccCCceEEEEEehhh--hhhHHHHHhhhHHHHHHHHHHHHcccc--h--hheeeE
Confidence 32211 111111111 00 124779999997655 445551 00111223344444444332 1 222444
Q ss_pred eccccchhccCCCcCC
Q 019558 283 EVGGSDALRLHIPHWK 298 (339)
Q Consensus 283 ~~~~~dp~~~~~p~~~ 298 (339)
=....|||...+|+-+
T Consensus 256 ~s~~~d~L~~~l~e~~ 271 (389)
T COG4552 256 ISPPQDPLEHLLTEQR 271 (389)
T ss_pred ecCCCCchhhhccchh
Confidence 4567788888888773
No 67
>COG3818 Predicted acetyltransferase, GNAT superfamily [General function prediction only]
Probab=98.30 E-value=2.9e-06 Score=67.42 Aligned_cols=139 Identities=19% Similarity=0.194 Sum_probs=97.4
Q ss_pred eEEEEEcCCcchHHHHHHHHHHhccCCCCccccccccccchhHHhhcCCCceEEEEEECCeEEEEEEEEEeeccccCCC-
Q 019558 5 EVITRSYDRQIDRARVEDLERRCEVGPAERVFLFTDTLGDPICRIRNSPMYKMLVAELDRELVGVIQGSIKQVTVQKPH- 83 (339)
Q Consensus 5 ~i~IR~~~~~~D~~~v~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~VAe~~geiVG~i~~~~~~~~~~~~~- 83 (339)
.+.||-.. ..|..++..|.++...... |+- .+.+.++.... |+|+.+|.+-|++...-... .++..
T Consensus 7 p~~~~D~~-apd~aavLaLNNeha~els---wLe----~erL~~l~~eA----F~ArR~G~l~afl~tFd~~a-~ydSpN 73 (167)
T COG3818 7 PILIRDVR-APDLAAVLALNNEHALELS---WLE----LERLYRLYKEA----FVARRDGNLAAFLVTFDSSA-RYDSPN 73 (167)
T ss_pred ceehhhhc-CCchhhHHhccchhhhhcc---ccC----HHHHHHHHHHH----HHHhhccchhhheeeccccc-cCCCCc
Confidence 46677777 7799999988665422110 110 11233333222 68888888877775432221 11111
Q ss_pred -----CCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEe--ccCChHHHHHHHhhCCCEEeecCeee
Q 019558 84 -----EDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMAT--EKDNEASVKLFVNKLGYVNFRTPAIL 156 (339)
Q Consensus 84 -----~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v--~~~N~~a~~lfY~k~GF~~~~~~~~~ 156 (339)
..+....||..+.|....||+|+|++|.+.+.++++..|..++...| ++.|++|..+ -..+||.++++..+.
T Consensus 74 FlWFrErYe~F~YvDRvVVA~~aRGrG~aRalY~Dlf~~Ae~agy~~~tCEVn~DppnpasdaF-HaalGF~eVG~a~ih 152 (167)
T COG3818 74 FLWFRERYENFFYVDRVVVASRARGRGVARALYADLFSYAELAGYPYLTCEVNLDPPNPASDAF-HAALGFHEVGQATIH 152 (167)
T ss_pred eeehhhhCCceEEEEEEEEEecccccchHHHHHHHHHHHHHhcCCceEEEEecCCCCChHHHHH-hhhcCceEccceEEe
Confidence 23557789999999999999999999999999999999999988887 5678888776 999999999886655
Q ss_pred e
Q 019558 157 V 157 (339)
Q Consensus 157 ~ 157 (339)
.
T Consensus 153 g 153 (167)
T COG3818 153 G 153 (167)
T ss_pred c
Confidence 4
No 68
>KOG4144 consensus Arylalkylamine N-acetyltransferase [General function prediction only]
Probab=98.20 E-value=9.3e-07 Score=72.23 Aligned_cols=136 Identities=17% Similarity=0.144 Sum_probs=87.4
Q ss_pred eEEEEEcCCcchHHHHHHHHHHhccCCCCccccccccccchhHHhhcCCCceEEEE---------EECCeEEEEEEEEEe
Q 019558 5 EVITRSYDRQIDRARVEDLERRCEVGPAERVFLFTDTLGDPICRIRNSPMYKMLVA---------ELDRELVGVIQGSIK 75 (339)
Q Consensus 5 ~i~IR~~~~~~D~~~v~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~VA---------e~~geiVG~i~~~~~ 75 (339)
.+.||+.. ++|.+++..|...+|. ++...++ +-+.+. ...-| +.+... ...+.+||.+.+..+
T Consensus 11 ~~~irp~i-~e~~q~~~~Lea~~FP-e~erasf--eii~~r---~i~~p-evc~glf~~~~h~~~~~~~tLIghIigs~~ 82 (190)
T KOG4144|consen 11 APRIRPGI-PESCQRRHTLEASEFP-EDERASF--EIIRER---FISVP-EVCPGLFDEIRHFLTLCEGTLIGHIIGSLW 82 (190)
T ss_pred cccCCCCC-hHHHHHHhccccccCC-hhHHHHH--HHHHHH---Hhcch-hhcchhhhhHHhhhhhccccceehhhcccC
Confidence 57899999 9999999999888873 2111111 011111 11111 111111 115789999988766
Q ss_pred ecccc-----CCCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCC-CcEEEEEeccCChHHHHHHHhhCCCEE
Q 019558 76 QVTVQ-----KPHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSND-VDYAYMATEKDNEASVKLFVNKLGYVN 149 (339)
Q Consensus 76 ~~~~~-----~~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g-~~~i~l~v~~~N~~a~~lfY~k~GF~~ 149 (339)
+.... ..+...+....|..++|+|+||.+|+|+.|+...++.+.++. ..++.|.....-.+ ||+++||..
T Consensus 83 ~~E~lt~ESm~kh~s~g~ni~iHsl~Ihpa~rk~g~a~~Ll~~ylq~l~~q~i~~r~~Li~h~pLvP----FYEr~gFk~ 158 (190)
T KOG4144|consen 83 DKERLTQESMTKHRSGGHNIHIHSLAIHPAFRKQGRAPILLWRYLQHLGSQPIVRRAALICHDPLVP----FYERFGFKA 158 (190)
T ss_pred cchhhhHHHHhhhhcCCcceeEEEEEecHHHHhcCcchhHHHHHHHHhhcCccccceeeeecCCccc----hhHhcCcee
Confidence 53321 112333455889999999999999999999999888776653 34555555555555 799999998
Q ss_pred eec
Q 019558 150 FRT 152 (339)
Q Consensus 150 ~~~ 152 (339)
.+.
T Consensus 159 vgp 161 (190)
T KOG4144|consen 159 VGP 161 (190)
T ss_pred ecc
Confidence 765
No 69
>PF14542 Acetyltransf_CG: GCN5-related N-acetyl-transferase; PDB: 2H5M_A 2Q44_A 1XMT_A 2Q4Y_A 2IL4_A 2EVN_A 1R57_A.
Probab=98.08 E-value=4.8e-05 Score=56.32 Aligned_cols=67 Identities=18% Similarity=0.128 Sum_probs=48.9
Q ss_pred EEEEECCeEEEEEEEEEeeccccCCCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHH
Q 019558 58 LVAELDRELVGVIQGSIKQVTVQKPHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEAS 137 (339)
Q Consensus 58 ~VAe~~geiVG~i~~~~~~~~~~~~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a 137 (339)
|.+.++|+.+|.+..... ..+..+....|.|++||||||+.|++.+.++++++|.+ +.+...-+
T Consensus 2 F~~~~~g~~~a~l~Y~~~-----------~~~~~i~hT~V~~~~rGqGia~~L~~~~l~~a~~~~~k-----v~p~C~y~ 65 (78)
T PF14542_consen 2 FELKDDGEEIAELTYRED-----------GGVIVITHTEVPPELRGQGIAKKLVEAALDYARENGLK-----VVPTCSYV 65 (78)
T ss_dssp EEEESSTTEEEEEEEEES-----------SSEEEEEEEEE-CSSSTTTHHHHHHHHHHHHHHHTT-E-----EEETSHHH
T ss_pred EEEEECCEEEEEEEEEeC-----------CCEEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCE-----EEEECHHH
Confidence 345567889999966431 23477888899999999999999999999999999974 44444544
Q ss_pred HHH
Q 019558 138 VKL 140 (339)
Q Consensus 138 ~~l 140 (339)
.+.
T Consensus 66 ~~~ 68 (78)
T PF14542_consen 66 AKY 68 (78)
T ss_dssp HHH
T ss_pred HHH
Confidence 444
No 70
>COG3375 Uncharacterized conserved protein [Function unknown]
Probab=98.08 E-value=5.6e-05 Score=65.73 Aligned_cols=132 Identities=20% Similarity=0.131 Sum_probs=97.3
Q ss_pred eEEEEEcCCcchHHHHHHHHHHhccCCCCccccccccccchhHHhhcCCCceEEEEEEC-CeEEEEEEEEEeeccccCCC
Q 019558 5 EVITRSYDRQIDRARVEDLERRCEVGPAERVFLFTDTLGDPICRIRNSPMYKMLVAELD-RELVGVIQGSIKQVTVQKPH 83 (339)
Q Consensus 5 ~i~IR~~~~~~D~~~v~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~VAe~~-geiVG~i~~~~~~~~~~~~~ 83 (339)
++.||.++.+.++.+++++.... |+....... ..+.+. .....+...+.|+.+ |++||...+.. . .
T Consensus 2 ~vvvrrl~dp~el~~~~dV~~~a-Wg~~d~~~~----~~d~i~-al~~~GGlvlgAf~~dg~lVGls~G~p-g------~ 68 (266)
T COG3375 2 KVVVRRLTDPAELDEAEDVQASA-WGSEDRDGA----PADTIR-ALRYHGGLVLGAFSADGRLVGLSYGYP-G------G 68 (266)
T ss_pred ceeEEecCCHHHHHHHHHHHHHH-hCccccccc----hHHHHH-HHHhcCCeEEEEEcCCCcEEEEEeccC-C------c
Confidence 57788888789999999987776 444333222 223333 233445788889886 59999986654 1 1
Q ss_pred CCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHHHHhhCCCEE
Q 019558 84 EDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKLFVNKLGYVN 149 (339)
Q Consensus 84 ~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY~k~GF~~ 149 (339)
+...-..|-..+.|.|++|+.|+|-+|=...-+++.++|++.|..+-++-|.-.-+|...|+|-..
T Consensus 69 r~g~~y~ySH~~gV~e~~k~sglg~aLK~~Qre~a~~~G~tli~WTfDPl~alNA~fNi~KLGa~a 134 (266)
T COG3375 69 RGGSLYLYSHMLGVREEVKGSGLGVALKMKQRERALSMGYTLIAWTFDPLNALNARFNISKLGAIA 134 (266)
T ss_pred CCCceeeeeeehhccccccccchhhhhHHHHHHHHHhcCeeeEEEecccchhhhhhcchhhhceeE
Confidence 111223566788999999999999999999999999999999999988888776677788888764
No 71
>PF08444 Gly_acyl_tr_C: Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region; InterPro: IPR013652 This entry represents mammalian-specific glycine N-acyltransferase (also called aralkyl acyl-CoA:amino acid N-acyltransferase; 2.3.1.13 from EC). Mitochondrial acyltransferases catalyse the transfer of an acyl group from acyl-CoA to the N terminus of glycine to produce N-acylglycine. These enzymes can conjugate a multitude of substrates to form a variety of N-acylglycines. The CoA derivatives of a number of aliphatic and aromatic acids, but not phenylacetyl-CoA or (indol-3-yl)acetyl-CoA, can act as donor [, ].
Probab=98.06 E-value=1.6e-05 Score=59.73 Aligned_cols=58 Identities=26% Similarity=0.362 Sum_probs=52.7
Q ss_pred EEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHHHHhhCCCEE
Q 019558 90 GYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKLFVNKLGYVN 149 (339)
Q Consensus 90 ~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY~k~GF~~ 149 (339)
+.+..-.+.|+|||||+.+.++....+.+.++|+. ++..|.++|+.++++ ..++||..
T Consensus 20 ge~rmgyTlPeyR~~G~~~~v~~~~~~~L~~~g~P-~Y~hv~~~N~~~~r~-~~~lg~~~ 77 (89)
T PF08444_consen 20 GEMRMGYTLPEYRGQGLMSQVMYHLAQYLHKLGFP-FYGHVDEDNEASQRL-SKSLGFIF 77 (89)
T ss_pred ccccccccCHhHhcCCHHHHHHHHHHHHHHHCCCC-eEeehHhccHHHHHH-HHHCCCee
Confidence 45555669999999999999999999999999996 789999999999999 88999986
No 72
>COG1444 Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only]
Probab=98.03 E-value=0.00011 Score=75.45 Aligned_cols=105 Identities=18% Similarity=0.173 Sum_probs=74.7
Q ss_pred hhHHhhcCCCceEEEEEECC-eEEEEEEEEEeecc------------ccCCC------------C--CCccEEEEEEEEe
Q 019558 45 PICRIRNSPMYKMLVAELDR-ELVGVIQGSIKQVT------------VQKPH------------E--DLAKVGYVLGLRV 97 (339)
Q Consensus 45 ~l~~~~~~~~~~~~VAe~~g-eiVG~i~~~~~~~~------------~~~~~------------~--~~~~~~~I~~l~V 97 (339)
.+..+...|++.++++..++ .+|+++.+...+.. ...|+ . ......-|..++|
T Consensus 460 DL~~L~DaP~h~~~al~~~~~~~va~~qva~EG~l~~~~i~~~~~g~r~~GnlIp~~l~~~~~~~~fa~l~G~RIvRIAv 539 (758)
T COG1444 460 DLRRLLDAPHHHIFALRAPEGKPVAVWQVAEEGGLSDELIDIWLGGRRPRGNLIPDLLAKHHRDPEFAKLVGWRIVRIAV 539 (758)
T ss_pred HHHHHhcCCCCeeEEEEcCCCceEEEEEeeccCCCcHHHHHHHhcCCCCCCcccHHHHHHhhcchhhcccceeeEEEEEe
Confidence 36667778889999998876 88888877655432 00111 1 1123345899999
Q ss_pred CcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHHHHhhCCCEEeec
Q 019558 98 APLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKLFVNKLGYVNFRT 152 (339)
Q Consensus 98 ~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY~k~GF~~~~~ 152 (339)
+|++|++|||++|++.+.++++ .+++++-.. .-.++.-++| +.|+||.+++-
T Consensus 540 hPe~q~~GiGsrlL~~l~~~a~-~~~Dwlgvs-FG~t~~L~rF-W~rnGF~pVhl 591 (758)
T COG1444 540 HPELQRMGIGSRLLALLIEEAR-KGLDWLGVS-FGYTEELLRF-WLRNGFVPVHL 591 (758)
T ss_pred CHHHHhcCHHHHHHHHHHHHHh-cCCCEEeec-cCCCHHHHHH-HHHcCeEEEEe
Confidence 9999999999999999999997 566666544 3334444565 99999998653
No 73
>COG2388 Predicted acetyltransferase [General function prediction only]
Probab=97.87 E-value=4.9e-05 Score=58.59 Aligned_cols=63 Identities=17% Similarity=0.021 Sum_probs=51.2
Q ss_pred CCceEEEEEECCeEEEEEEEEEeeccccCCCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcE
Q 019558 53 PMYKMLVAELDRELVGVIQGSIKQVTVQKPHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDY 125 (339)
Q Consensus 53 ~~~~~~VAe~~geiVG~i~~~~~~~~~~~~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~ 125 (339)
.....++..++|+.+|.+.....+. ....|..-.|.+++||||||++|++.+++.+++.|.+.
T Consensus 13 ~~~~~y~~~~~G~~~~e~~y~~~~~----------~~i~i~HT~V~d~lrGqGia~~L~~~al~~ar~~g~ki 75 (99)
T COG2388 13 GENGRYVLTDEGEVIGEATYYDRGE----------NLIIIDHTYVPDELRGQGIAQKLVEKALEEAREAGLKI 75 (99)
T ss_pred cCceEEEEecCCcEEEEEEEecCCC----------CEEEEecCcCCHHHcCCcHHHHHHHHHHHHHHHcCCeE
Confidence 4467888889999999886544332 23667777899999999999999999999999998743
No 74
>TIGR03827 GNAT_ablB putative beta-lysine N-acetyltransferase. Members of this protein family are GNAT family acetyltransferases, based on a seed alignment in which every member is associated with a lysine 2,3-aminomutase family protein, usually as the adjacent gene. This family includes AblB, the enzyme beta-lysine acetyltransferase that completes the two-step synthesis of the osmolyte (compatible solute) N-epsilon-acetyl-beta-lysine; all members of the family may have this function. Note that N-epsilon-acetyl-beta-lysine has been observed only in methanogenic archaea (e.g. Methanosarcina) but that this model, paired with TIGR03820, suggests a much broader distribution.
Probab=97.80 E-value=0.00027 Score=64.80 Aligned_cols=169 Identities=9% Similarity=0.083 Sum_probs=108.8
Q ss_pred CCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHHHHhhCCCEEeecCeeee---------ccccc------------
Q 019558 104 KGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKLFVNKLGYVNFRTPAILV---------HPVNN------------ 162 (339)
Q Consensus 104 kGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY~k~GF~~~~~~~~~~---------~p~~~------------ 162 (339)
.|-...|++.+.+.|+++|+.+|.+-+...+.. .+++.||...+....+. .....
T Consensus 20 ~~~~~~~~~~~~~~a~~~~~~ki~~~~~~~~~~----~~~~~g~~~e~~i~~~f~g~~~~~~~~~~~~~r~~~~~~~~~~ 95 (266)
T TIGR03827 20 GNDVEALIPDLDALAKKEGYTKIIAKVPGSDKP----LFEERGYLEEAKIPGYFNGHDAYFMSKYLDEDRRISSHSEKED 95 (266)
T ss_pred CccHHHHHHHHHHHHHHcCCcEEEEEccHHHHH----HHHHCCCeEEEecccccCCCceEEEEEcCchHhCCCCcHHHHH
Confidence 355889999999999999999999998888644 49999999885543221 11000
Q ss_pred -----------c-cccCCCceeEeecCHHHHHHHHHHhccCCCCCCCC--hhhhhhccCCc-ceEEEeeeCCcccccCCC
Q 019558 163 -----------R-MFHTPSNVQIRKLRIEEAENLYYKFMASTEFFPYD--IGNILRNKLSL-GTWVAYPRGEIVGEFGSN 227 (339)
Q Consensus 163 -----------~-~~~~~~~~~i~~l~~~da~~l~~~~~~~~~~~p~d--~~~~L~~~l~~-gt~~a~~~~~~~~~~~~~ 227 (339)
. ...+|.++.+++++++|++.+.+........+|.+ -+..+...+.. ..++++..++...|+.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~IR~a~~~D~~~l~~L~~~v~~~~~~~~~~~~~l~~~~~~~~~~~v~~~~g~iVG~~-- 173 (266)
T TIGR03827 96 EVLEAALSKPRKPKIALPEGFTLRIATEDDADAMAALYRKVFPTYPFPIHDPAYLLETMKSNVVYFGVEDGGKIIALA-- 173 (266)
T ss_pred HHHHHHHhccCCCccCCCCceEEEECCHHHHHHHHHHHHHHhccCCCCccCHHHHHHHhcCCcEEEEEEECCEEEEEE--
Confidence 0 11267789999999999877655443322223332 23334333332 3455555555554442
Q ss_pred CCCCCCceEEEEEEecCc---c--eeccCCCChHHHHHHHHHhhhhccccCCCCceEEEEeccccch
Q 019558 228 GQIFPKSWAMVSVWNSGE---L--FKLREGPLSGKMVRTLCQFVHNMAGTKSKDCKVIVTEVGGSDA 289 (339)
Q Consensus 228 ~~~~~~~~a~~svw~~~~---~--~~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~dp 289 (339)
.+.+..... + +-+.+..++..+.+.|+.++.+.++ +.|+..+.+++...++
T Consensus 174 ---------~~~~~~~~~~~eI~~i~V~P~yRG~GiG~~Ll~~l~~~a~--~~g~~~l~~~~~~~n~ 229 (266)
T TIGR03827 174 ---------SAEMDPENGNAEMTDFATLPEYRGKGLAKILLAAMEKEMK--EKGIRTAYTIARASSY 229 (266)
T ss_pred ---------EEecCCCCCcEEEEEEEECHHHcCCCHHHHHHHHHHHHHH--HCCCcEEEeehhhcch
Confidence 222111111 1 2233777888899999999999999 8999999999877664
No 75
>PF13480 Acetyltransf_6: Acetyltransferase (GNAT) domain
Probab=97.70 E-value=0.0013 Score=53.28 Aligned_cols=115 Identities=16% Similarity=0.053 Sum_probs=75.9
Q ss_pred eEEEEEcCCcchHHHHHHHHHHhccCC-CCc-cccccccccchhHHhhcCCCceEEEEEECCeEEEEEEEEEeeccccCC
Q 019558 5 EVITRSYDRQIDRARVEDLERRCEVGP-AER-VFLFTDTLGDPICRIRNSPMYKMLVAELDRELVGVIQGSIKQVTVQKP 82 (339)
Q Consensus 5 ~i~IR~~~~~~D~~~v~~L~~~~~~~~-~~~-~~~~~~~~~~~l~~~~~~~~~~~~VAe~~geiVG~i~~~~~~~~~~~~ 82 (339)
.+.++..+..+|++.+.++........ ... +....+.+.+-+..........++++..+|++||+..+.....
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~g~~va~~~~~~~~~----- 93 (142)
T PF13480_consen 19 GVRFEVATDPADLEAFYELYRESWARRHGGFAPPFSRDFFRDLLRSLAESGRLRLFVLYDGGEPVAFALGFRHGG----- 93 (142)
T ss_pred CEEEEEeCCHHHHHHHHHHHHHHHhhhhCCCCCcchHHHHHHHHHhhccCCCEEEEEEEECCEEEEEEEEEEECC-----
Confidence 356666544888998888876642222 111 1111122222222222234456778889999999986655431
Q ss_pred CCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEe
Q 019558 83 HEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMAT 130 (339)
Q Consensus 83 ~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v 130 (339)
..+.....++|+++..++|..|+..+++++.++|++.+.+..
T Consensus 94 ------~~~~~~~g~~~~~~~~~~~~~l~~~~i~~a~~~g~~~~d~g~ 135 (142)
T PF13480_consen 94 ------TLYYWYGGYDPEYRKYSPGRLLLWEAIRWAIERGLRYFDFGG 135 (142)
T ss_pred ------EEEEEEEEECHhhHhCCHHHHHHHHHHHHHHHCCCCEEEECC
Confidence 256667778999999999999999999999999998777654
No 76
>COG0454 WecD Histone acetyltransferase HPA2 and related acetyltransferases [Transcription / General function prediction only]
Probab=97.60 E-value=9.3e-05 Score=56.13 Aligned_cols=44 Identities=34% Similarity=0.522 Sum_probs=40.0
Q ss_pred EEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHHHHhhCCC
Q 019558 95 LRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKLFVNKLGY 147 (339)
Q Consensus 95 l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY~k~GF 147 (339)
+.|+|+|||+|||++|++.++++++..|+. .|..++.+ |++.||
T Consensus 87 l~v~~~~rg~Gig~~Ll~~~~~~~~~~g~~--------~~~~~~~~-~~~~~~ 130 (156)
T COG0454 87 LYVLPEYRGKGIGSALLEAALEWARKRGIS--------LNRLALEV-YEKNGF 130 (156)
T ss_pred EEecchhhccchHHHHHHHHHHHHHHcCce--------ehHHHHHH-HHhcCC
Confidence 899999999999999999999999998873 67777887 999998
No 77
>COG3053 CitC Citrate lyase synthetase [Energy production and conversion]
Probab=97.33 E-value=0.0015 Score=59.40 Aligned_cols=77 Identities=12% Similarity=0.173 Sum_probs=62.9
Q ss_pred EEEEEE-CCeEEEEEEEEEeeccccCCCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCCh
Q 019558 57 MLVAEL-DRELVGVIQGSIKQVTVQKPHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNE 135 (339)
Q Consensus 57 ~~VAe~-~geiVG~i~~~~~~~~~~~~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~ 135 (339)
+.++.. +++||++.++. | ..|-.++|+|.+||-|+..+|+.++++.+-++|..++.+.|.+.+.
T Consensus 38 ~v~~~~~~~~iiacGsia--------G-------nvikcvAvs~s~qGeGl~lkl~TeLin~ay~~g~~hLFiyTKp~~~ 102 (352)
T COG3053 38 FVAIYRDNEEIIACGSIA--------G-------NVIKCVAVSESLQGEGLALKLVTELINLAYERGRTHLFIYTKPEYA 102 (352)
T ss_pred EEEEEcCCCcEEEecccc--------c-------ceeEEEEechhcccccHHHHHHHHHHHHHHHcCCceEEEEechhHH
Confidence 344444 48999887331 1 2356679999999999999999999999999999999999988887
Q ss_pred HHHHHHHhhCCCEEeec
Q 019558 136 ASVKLFVNKLGYVNFRT 152 (339)
Q Consensus 136 ~a~~lfY~k~GF~~~~~ 152 (339)
+ +++.+||.....
T Consensus 103 ~----lFk~~GF~~i~~ 115 (352)
T COG3053 103 A----LFKQCGFSEIAS 115 (352)
T ss_pred H----HHHhCCceEeec
Confidence 7 699999987654
No 78
>COG5628 Predicted acetyltransferase [General function prediction only]
Probab=97.08 E-value=0.0073 Score=47.60 Aligned_cols=83 Identities=14% Similarity=0.055 Sum_probs=57.7
Q ss_pred ceEEEEEECCeEEEEEEEEEeeccccCCCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCC
Q 019558 55 YKMLVAELDRELVGVIQGSIKQVTVQKPHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDN 134 (339)
Q Consensus 55 ~~~~VAe~~geiVG~i~~~~~~~~~~~~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N 134 (339)
-..+....+|.+||++..--+.-.. +..---+..+.+...|||+|+|++..+.+-...+ |. ..+.+...|
T Consensus 37 ~~~~~~~~~~~~igf~l~L~~~~~~------~~iD~~~~efFIi~k~~~~GvGR~aaK~If~~~~--g~--w~Va~i~EN 106 (143)
T COG5628 37 REAWLFRIGGLPVGFALVLDLAHSP------TPIDRAVAEFFIVRKHRRRGVGRAAAKAIFGSAW--GV--WQVATVREN 106 (143)
T ss_pred cceeEEEECCceeeeeeeecccCCC------CcccccchheEeeehhhccchhHHHHHHHHHHhh--ce--EEEEEeccC
Confidence 3345566789999999775443221 2222335667788999999999999988866543 33 455678899
Q ss_pred hHHHHHHHhhCCCE
Q 019558 135 EASVKLFVNKLGYV 148 (339)
Q Consensus 135 ~~a~~lfY~k~GF~ 148 (339)
.+|+.+ +++.-+.
T Consensus 107 ~PA~~f-wK~~~~t 119 (143)
T COG5628 107 TPARAF-WKRVAET 119 (143)
T ss_pred ChhHHH-HHhhhcc
Confidence 999998 8776554
No 79
>PF06852 DUF1248: Protein of unknown function (DUF1248); InterPro: IPR009658 This entry represents a conserved region within a number of proteins of unknown function that seem to be specific to Caenorhabditis elegans. Note that some proteins in the entry contain more than one copy of this region.
Probab=97.02 E-value=0.014 Score=50.19 Aligned_cols=118 Identities=12% Similarity=0.085 Sum_probs=69.0
Q ss_pred EEEEEC-CeEEEEEEEEEeeccccCCCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChH
Q 019558 58 LVAELD-RELVGVIQGSIKQVTVQKPHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEA 136 (339)
Q Consensus 58 ~VAe~~-geiVG~i~~~~~~~~~~~~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~ 136 (339)
++...+ .++|+.++.+....-. .....+..+++...++|+|||+|+++.+-+.+.+..+..+-. . +...+..
T Consensus 49 ~~~~KgT~~via~~~~~~~~~l~---~~~d~pl~~~G~~w~~p~yRg~~~~kl~~~~~~~~~~~~~~N-~---~~~~~~~ 121 (181)
T PF06852_consen 49 LTCLKGTDRVIATVHLIRFDPLN---PSPDKPLQFIGFFWIDPEYRGKGIMKLQDDICMDELDSVDDN-S---VAQGNVK 121 (181)
T ss_pred EEEEcCCCcEEEEEEEEEeccCC---CCCCCCeEEEeeeeeCCcccCcchHHHHHHHHHHHhccCCCc-e---eeecCHH
Confidence 334434 7799999887654221 112356789999999999999999964444444544332221 1 3456677
Q ss_pred HHHHHHhhCCCEEeecCeeeecccccccccCC-----CceeEeecCHHHHH
Q 019558 137 SVKLFVNKLGYVNFRTPAILVHPVNNRMFHTP-----SNVQIRKLRIEEAE 182 (339)
Q Consensus 137 a~~lfY~k~GF~~~~~~~~~~~p~~~~~~~~~-----~~~~i~~l~~~da~ 182 (339)
+.+++-.-+||...+....+..-.......+| .++.++.+.....+
T Consensus 122 ~~~~w~k~~G~~~~~h~~~y~S~y~~~d~~IP~~L~~~gi~vKna~eVp~~ 172 (181)
T PF06852_consen 122 MSNFWHKMFGFDDYGHDWYYVSYYDPDDVKIPENLDTDGITVKNAREVPKE 172 (181)
T ss_pred HHHHHHHHhCCCCCccceeEeeeccHHHeeccCccCcCceEecccccCCHH
Confidence 78875567898887773333322212122233 45666665443333
No 80
>PF04958 AstA: Arginine N-succinyltransferase beta subunit; InterPro: IPR007041 Arginine N-succinyltransferase catalyses the transfer of succinyl-CoA to arginine to produce succinylarginine. This is the first step in arginine catabolism via the arginine succinyltransferase pathway. Six major L-arginine-degrading pathways have been described for prokaryotes []. Many bacteria arginine succinyltransferase 2.3.1.109 from EC, which is the AstA protein of the succinyltransferase (ast) pathway operon consists of five genes. In a few species, such as Pseudomonas aeruginosa, a tandem gene pair encodes alpha and beta subunits of a heterodimer that is designated arginine and ornithine succinyltransferase (AOST). This entry represents the family of proteins that make up the beta subunit of the heterodimer of Ast and AOST.; GO: 0008791 arginine N-succinyltransferase activity, 0006527 arginine catabolic process; PDB: 1YLE_A.
Probab=97.00 E-value=0.0069 Score=57.02 Aligned_cols=143 Identities=17% Similarity=0.078 Sum_probs=74.4
Q ss_pred eEEEEEcCCcchHHHHHHHHHHhccCCCCccccccccccchhHH----h---h-cC--CCceEEEEEE--CCeEEEEEEE
Q 019558 5 EVITRSYDRQIDRARVEDLERRCEVGPAERVFLFTDTLGDPICR----I---R-NS--PMYKMLVAEL--DRELVGVIQG 72 (339)
Q Consensus 5 ~i~IR~~~~~~D~~~v~~L~~~~~~~~~~~~~~~~~~~~~~l~~----~---~-~~--~~~~~~VAe~--~geiVG~i~~ 72 (339)
|+.||+++ ..|++++.+|......+...-|. -.+.+...+.+ . . .. ....+||.|+ .|+|||++.+
T Consensus 1 M~viRp~~-~~Dl~aL~~LA~~sg~G~TsLP~-d~~~L~~rI~~S~~sFa~~~~~~~~~~~YlfVLED~~tg~vvGts~I 78 (342)
T PF04958_consen 1 MLVIRPAR-PSDLDALYALARESGPGFTSLPP-DREALAERIERSERSFAGRDVDFPGDEGYLFVLEDTETGEVVGTSAI 78 (342)
T ss_dssp -EEEEE---GGGHHHHHHHHHHS-TT-TTS-S--HHHHHHHHHHHHHHHH-TT----S--EEEEEEEETTT--EEEEEEE
T ss_pred CeEEecCc-hhhHHHHHHHHHHcCCCcccCCC-CHHHHHHHHHHHHHHhhccccCCCCccceEEEEEecCCCcEEEEEeE
Confidence 58899999 99999999999887543322111 11223333322 1 1 11 2246788887 4999999876
Q ss_pred EEee---ccccCC-----------------------CCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHh---CCC
Q 019558 73 SIKQ---VTVQKP-----------------------HEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTS---NDV 123 (339)
Q Consensus 73 ~~~~---~~~~~~-----------------------~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~---~g~ 123 (339)
...- ..+|.. ...+.....|+.|.++|+||+-|.|+.|-+.-.=...+ +=.
T Consensus 79 ~a~vG~~~PfY~yr~~~~vh~S~~L~v~~~~~~L~L~~d~tG~sEl~tLfL~p~~R~~~~G~lLSr~RfLFiA~~~~rF~ 158 (342)
T PF04958_consen 79 EAAVGLDEPFYSYRVSTLVHASRELGVRNRHETLTLSNDYTGCSELCTLFLDPDYRGGGNGRLLSRSRFLFIAQHRERFA 158 (342)
T ss_dssp ESSTTSSS---EEEEEEEEEEETTTTEEEEEEEEEEE-TTTTSEEEEEEEE-GGGTTSHHHHHHHHHHHHHHHH-GGGS-
T ss_pred EeccCCCCCcEEEEcCceeEcCcccCCccceeeEeeecCCCCCeeeEEEEECHHHcCCchHHHHHHHHHHHHHhChhhcc
Confidence 4311 011100 01223346789999999999999999988765444433 333
Q ss_pred cEEEEEe-ccCChHHHHHHHhhCCCEE
Q 019558 124 DYAYMAT-EKDNEASVKLFVNKLGYVN 149 (339)
Q Consensus 124 ~~i~l~v-~~~N~~a~~lfY~k~GF~~ 149 (339)
+.+.... ...++.+...||+.+|-.-
T Consensus 159 ~~viAElrG~~De~G~SPFWdalG~~F 185 (342)
T PF04958_consen 159 DRVIAELRGVSDEDGRSPFWDALGRHF 185 (342)
T ss_dssp SEEEEE--B---TT---HHHHHTGGGT
T ss_pred hheeeeccCCcCCCCCCchHHHhhccc
Confidence 4555543 2233334445788888653
No 81
>PF01233 NMT: Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain; InterPro: IPR022676 Myristoyl-CoA:protein N-myristoyltransferase (2.3.1.97 from EC) (Nmt) [] is the enzyme responsible for transferring a myristate group on the N-terminal glycine of a number of cellular eukaryotics and viral proteins. Nmt is a monomeric protein of about 50 to 60kDa whose sequence appears to be well conserved. The N and C-terminal domains of NMT are structurally similar, each adopting an acyl-CoA N-acyltransferase-like fold. This entry represents the N-terminal region. ; GO: 0004379 glycylpeptide N-tetradecanoyltransferase activity; PDB: 2P6G_B 2P6F_F 2P6E_A 1IIC_A 1IID_A 2NMT_A 4A33_A 3H5Z_A 4A2Z_A 2WSA_A ....
Probab=96.96 E-value=0.066 Score=44.74 Aligned_cols=118 Identities=14% Similarity=0.123 Sum_probs=69.8
Q ss_pred EEEEEcC--CcchHHHHHHHHHHhccCCCCccccccccccchhHHh-hcCCCc---eEEEEEE--CCeEEEEEEEEEeec
Q 019558 6 VITRSYD--RQIDRARVEDLERRCEVGPAERVFLFTDTLGDPICRI-RNSPMY---KMLVAEL--DRELVGVIQGSIKQV 77 (339)
Q Consensus 6 i~IR~~~--~~~D~~~v~~L~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~---~~~VAe~--~geiVG~i~~~~~~~ 77 (339)
+.-...+ +.+++.++.++...-.+. .....|.-.....+-+. +..|+. ..+.... .+++||||++.....
T Consensus 24 F~W~~~dl~d~~~l~ely~lL~~nYVE--Ddd~~fRf~YS~efL~WaL~pPg~~~~whiGVR~~~~~kLvgfIsaip~~i 101 (162)
T PF01233_consen 24 FEWSTLDLNDDEELKELYELLNENYVE--DDDNMFRFDYSKEFLKWALKPPGWKKEWHIGVRVKSSKKLVGFISAIPATI 101 (162)
T ss_dssp EEEEE--TTSHHHHHHHHHHHHHHSSB--TTTSSEEE---HHHHHHHHTSTT--GGGEEEEEETTTTEEEEEEEEEEEEE
T ss_pred CEEEecCCCCHHHHHHHHHHHHhcCcc--CCcceEEeeCCHHHHhheeeCcCCccceEEEEEECCCCEEEEEEccceEEE
Confidence 3444444 134455556655543322 22233333333333333 333332 2344433 599999999988776
Q ss_pred cccCCCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEE
Q 019558 78 TVQKPHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYM 128 (339)
Q Consensus 78 ~~~~~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l 128 (339)
.. .....++..|-.|+|++..|.++++--|++++..++...|+-+...
T Consensus 102 rv---~~~~~~~~eINFLCVhKklRskrlAPvLIkEItRRvn~~gI~qAvy 149 (162)
T PF01233_consen 102 RV---RDKVIKMVEINFLCVHKKLRSKRLAPVLIKEITRRVNLQGIWQAVY 149 (162)
T ss_dssp EE---TTEEEEEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHHTTT--EEEE
T ss_pred EE---eeeEeeeeeEEEEeecHhHhhcCCcHHHHHHHHHHhhhcCceeeee
Confidence 65 2234567899999999999999999999999999999888754443
No 82
>PRK10456 arginine succinyltransferase; Provisional
Probab=96.81 E-value=0.011 Score=55.68 Aligned_cols=108 Identities=19% Similarity=0.101 Sum_probs=67.7
Q ss_pred eEEEEEcCCcchHHHHHHHHHHhccCCCCccccccccccchhHHh-------hc-CCCceEEEEEE--CCeEEEEEEEEE
Q 019558 5 EVITRSYDRQIDRARVEDLERRCEVGPAERVFLFTDTLGDPICRI-------RN-SPMYKMLVAEL--DRELVGVIQGSI 74 (339)
Q Consensus 5 ~i~IR~~~~~~D~~~v~~L~~~~~~~~~~~~~~~~~~~~~~l~~~-------~~-~~~~~~~VAe~--~geiVG~i~~~~ 74 (339)
|+.||+++ ..|++++.+|......+...-|. -.+.+...+.+- .. ......||.|+ .|+|||++.+..
T Consensus 1 M~vvRpv~-~~Dl~aL~~LA~~sG~G~TsLP~-d~~~L~~rI~~S~~sF~~~~~~~~~~YlFVLED~~tg~vvGts~I~a 78 (344)
T PRK10456 1 MMVIRPVE-RSDLAALMQLAGKTGGGLTSLPA-NEATLAARIERALKTWQGELPKSEQGYVFVLEDSETGTVAGICAIEV 78 (344)
T ss_pred CeEEecCc-cccHHHHHHHHHHcCCCcccCCC-CHHHHHHHHHHHHHHhcCcCCCCCccEEEEEEeCCCCcEEEEEeEEe
Confidence 48899999 99999999999887644422211 112333333221 11 23356788886 489999987743
Q ss_pred ee---ccccCCC-----------------------CCCccEEEEEEEEeCcccccCCHHHHHHHHH
Q 019558 75 KQ---VTVQKPH-----------------------EDLAKVGYVLGLRVAPLHRRKGIGSSLVCKL 114 (339)
Q Consensus 75 ~~---~~~~~~~-----------------------~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~ 114 (339)
.- ..+|+.. ..+.....|+.|.++|+||+-|.|+.|-+.-
T Consensus 79 ~vG~~~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfl~p~~R~~~~G~LLSr~R 144 (344)
T PRK10456 79 AVGLNDPWYNYRVGTLVHASKELNVYNALPTLFLSNDHTGSSELCTLFLDPDWRKEGNGYLLSKSR 144 (344)
T ss_pred cccCCCCCEEEEcCceeecCcccCCceeeeeEEeeccCCCCceeEEEEECHHHcCCCchhHHHHHH
Confidence 21 1111100 1122345689999999999999998887653
No 83
>TIGR03694 exosort_acyl putative PEP-CTERM/exosortase system-associated acyltransferase. Members of this protein family are restricted to bacterial species with the PEP-CTERM/exosortase system predicted to act in exopolysaccharide-associated protein targeting. PSI-BLAST and CDD reveal relationships to the acyltransferase family that includes N-acyl-L-homoserine lactone synthetase. Several members of this family may be found in a single genome. These proteins likely contribute to chemical modifications in exopolysaccharide and biofilm structural material production.
Probab=96.81 E-value=0.026 Score=51.02 Aligned_cols=139 Identities=13% Similarity=0.017 Sum_probs=86.5
Q ss_pred eEEEEEcCCcchHHHHHHHHHHhccCCCCccccccccccchhHHhhcCCCceEEEEEE--CCeEEEEEEEEEeec-----
Q 019558 5 EVITRSYDRQIDRARVEDLERRCEVGPAERVFLFTDTLGDPICRIRNSPMYKMLVAEL--DRELVGVIQGSIKQV----- 77 (339)
Q Consensus 5 ~i~IR~~~~~~D~~~v~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~VAe~--~geiVG~i~~~~~~~----- 77 (339)
.+.++.+.+..++.++..+..+++....+...... ..+.++.=..+.....+++.+ +|++||++.+.....
T Consensus 7 ~~~v~~a~~~~~~~~~~~lR~~VFv~e~gw~~~~~--~~~~~E~D~~D~~~~h~l~~~~~~g~vvG~~RLl~t~~~~p~~ 84 (241)
T TIGR03694 7 YFEIIPAVTPELLEEAFRLRYQVYCEELGFEPPSD--YPDGLETDEYDAHSVHSLLRHRRTGTFVGCVRLVLPNSSDPDQ 84 (241)
T ss_pred eEEEEEcCCHHHHHHHHHHHHHHHHHhcCCCCCCC--CCCCCcCCCCCCCCcEEEEEECCCCCEEEEEEEeccccccccc
Confidence 36677777577789999999998654332110000 000011001122233344433 589999999976311
Q ss_pred ------cccC---CC--C----CCccEEEEEEEEeCcccccC--------C--------------------HHHHHHHHH
Q 019558 78 ------TVQK---PH--E----DLAKVGYVLGLRVAPLHRRK--------G--------------------IGSSLVCKL 114 (339)
Q Consensus 78 ------~~~~---~~--~----~~~~~~~I~~l~V~P~~Rgk--------G--------------------IG~~Ll~~~ 114 (339)
.+.. +. . ....+..++.++|+|++|++ | +...|+..+
T Consensus 85 ~~p~e~~~~~~~~~~~~~~~~~~~~~i~E~SRf~V~~~~r~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~ 164 (241)
T TIGR03694 85 PFPFEKHCSHSLDGLFLDPRRLPRSRIAEVSRLAVSKDFRRRKGEKLKPSGVGVIETEAPFSESERRRFPHIPLGLYLGL 164 (241)
T ss_pred cccHHHHhccccchhhcCccccCCCceEEeehheECHhHhCCcccccccccccccccccccchhhcccCchHHHHHHHHH
Confidence 0100 00 1 12468899999999999974 2 567899999
Q ss_pred HHHHHhCCCcEEEEEeccCChHHHHHHHhhCCCEE
Q 019558 115 EEWFTSNDVDYAYMATEKDNEASVKLFVNKLGYVN 149 (339)
Q Consensus 115 ~~~a~~~g~~~i~l~v~~~N~~a~~lfY~k~GF~~ 149 (339)
.+++..+|+++++..+... -.++ +.++|+..
T Consensus 165 ~~~a~~~Gi~~~~~v~~~~---l~r~-l~r~G~~~ 195 (241)
T TIGR03694 165 IALSSANGITHWYAIMEPR---LARL-LSRFGIQF 195 (241)
T ss_pred HHHHHHCCCcEEEEEeCHH---HHHH-HHHhCCce
Confidence 9999999999988776654 3345 89999865
No 84
>PF05301 Mec-17: Touch receptor neuron protein Mec-17; InterPro: IPR007965 Mec-17 is the protein product of one of the 18 genes required for the development and function of the touch receptor neuron for gentle touch. Mec-17 is specifically required for maintaining the differentiation of the touch receptor []. This family is conserved to higher eukaryotes.; GO: 0019799 tubulin N-acetyltransferase activity
Probab=96.75 E-value=0.019 Score=45.51 Aligned_cols=74 Identities=15% Similarity=0.236 Sum_probs=51.2
Q ss_pred CeEEEEEEEEEeeccccCCCCCC---ccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHH
Q 019558 64 RELVGVIQGSIKQVTVQKPHEDL---AKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKL 140 (339)
Q Consensus 64 geiVG~i~~~~~~~~~~~~~~~~---~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~l 140 (339)
|.++|++-...+.....+..... .+..+|..++|+++.||+|+|++|.+.+++. .++.-..+..+...+.-+.+
T Consensus 18 g~viG~LKVG~K~Lfl~d~~g~~~e~~~~~cvLDFyVhes~QR~G~Gk~LF~~ML~~---e~~~p~~~a~DrPS~Kll~F 94 (120)
T PF05301_consen 18 GAVIGFLKVGYKKLFLLDERGQHREIEPLLCVLDFYVHESRQRRGYGKRLFDHMLQE---ENVSPHQLAIDRPSPKLLSF 94 (120)
T ss_pred ceEEEEEEEeeeeEEEEcCCCCEEEecccceeeeEEEEeceeccCchHHHHHHHHHH---cCCCcccceecCCcHHHHHH
Confidence 67999998877765443322211 2334889999999999999999999999873 33333445566666665555
No 85
>PF00765 Autoind_synth: Autoinducer synthetase; InterPro: IPR001690 Bacterial species have many methods of controlling gene expression and cell growth. Regulation of gene expression in response to changes in cell density is termed quorum sensing [, ]. Quorum-sensing bacteria produce, release and respond to hormone-like molecules (autoinducers) that accumulate in the external environment as the cell population grows. Once a threshold of these molecules is reached, a signal transduction cascade is triggered that ultimately leads to behavioural changes in the bacterium []. Autoinducers are thus clearly important mediators of molecular communication. Conjugal transfer of Agrobacterium octopine-type Ti plasmids is activated by octopine, a metabolite released from plant tumours []. Octopine causes conjugal donors to secrete a pheromone, Agrobacterium autoinducer (AAI), and exogenous AAI further stimulates conjugation. The putative AAI synthase and an AAI-responsive transcriptional regulator have been found to be encoded by the Ti plasmid traI and traR genes, respectively. TraR and TraI are similar to the LuxR and LuxI regulatory proteins of Vibrio fischeri, and AAI is similar in structure to the diffusable V. fischeri autoinducer, the inducing ligand of LuxR. TraR activates target genes in the presence of AAI and also activates traR and traI themselves, creating two positive-feedback loops. TraR-AAI-mediated activation in wild-type Agrobacterium strains is enhanced by culturing on solid media, suggesting a possible role in cell density sensing []. Production of light by the marine bacterium V. fischeri and by recombinant hosts containing cloned lux genes is controlled by the density of the culture []. Density-dependent regulation of lux gene expression has been shown to require a locus consisting of the luxR and luxI genes. In these and other Gram-negative bacteria, N-(3-oxohexanoyl)-L-homoserine lactone (OHHL) acts as the autoinducer by binding to transcriptional regulatory proteins and activating them []. OHHL and related molecules, such as N-butanoyl- (BHL), N-hexanoyl- (HHL) and N-oxododecanoyl- (PAI) homoserine lactones, are produced by a family of proteins that share a high level of sequence similarity. Proteins which currently members of this family include: luxI from V. fischeri. ahyI and asaI from Aeromonas species, which synthesize BHL and whose targets are ahyR and asaR respectively. carI from Erwinia carotovora. The target of OHHL is carR which activates genes involved in the biosynthesis of carbapenem antibiotics. eagI from Enterobacter agglomerans. The target of OHHL is not yet known. esaI from Erwinia stewartii. expI from Erwinia carotovora. lasI from Pseudomonas aeruginosa, which synthesizes PAI and whose target is lasR which activates the transcription of the elastase gene. rhlI (or vsmI) from P. aeruginosa, which synthesizes BHL and HHL and whose target is rhlR. swrI from Serratia liquefaciens, which synthesizes BHL. yenI from Yersinia enterocolitica. ; GO: 0007165 signal transduction; PDB: 3P2H_A 3P2F_A 1KZF_A 1K4J_A 1RO5_A.
Probab=96.67 E-value=0.031 Score=48.30 Aligned_cols=129 Identities=17% Similarity=0.063 Sum_probs=80.3
Q ss_pred cchHHHHHHHHHHhccCCCCccccccccccchhHH-hhcCCCceEEEEEECCeEEEEEEEEEeeccc---------cCC-
Q 019558 14 QIDRARVEDLERRCEVGPAERVFLFTDTLGDPICR-IRNSPMYKMLVAELDRELVGVIQGSIKQVTV---------QKP- 82 (339)
Q Consensus 14 ~~D~~~v~~L~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~VAe~~geiVG~i~~~~~~~~~---------~~~- 82 (339)
.++++++..+..+.|....+-.-... +.++. ....+...++++.++|+++|++.+....... ..+
T Consensus 7 ~~~l~~~~rlR~~vFv~rlgW~v~~~----dg~E~DqyD~~~~~ylv~~~~g~v~g~~RLlptt~p~ML~~~F~~ll~~~ 82 (182)
T PF00765_consen 7 RRLLEEMFRLRHRVFVDRLGWDVPCE----DGMEIDQYDDPDAVYLVALDDGRVVGCARLLPTTGPYMLSDVFPHLLPDG 82 (182)
T ss_dssp HHHHHHHHHHHHHHHTTCSCCCHHCC----TSEE--TTGCTT-EEEEEEETTEEEEEEEEEETTS--HHHHCTGGGHTTS
T ss_pred HHHHHHHHHHHHHHHHHhhCCCCcCC----CCcEeeecCCCCCeEEEEEECCEEEEEeeeccCCCcchhhhHHHHHhCCC
Confidence 56788889998888764422110000 11111 1122345667778889999999887643211 011
Q ss_pred C-CCCccEEEEEEEEeCccccc------CCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHHHHhhCCCEEe
Q 019558 83 H-EDLAKVGYVLGLRVAPLHRR------KGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKLFVNKLGYVNF 150 (339)
Q Consensus 83 ~-~~~~~~~~I~~l~V~P~~Rg------kGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY~k~GF~~~ 150 (339)
. +....+-.+..++|+|+.++ .-+...|+..+.+++.++|++.++..+.. .-.++ +++.||...
T Consensus 83 ~~p~~~~vwE~SRf~v~~~~~~~~~~~~~~~~~~L~~~~~e~a~~~gi~~~v~V~~~---~~~r~-l~r~G~~~~ 153 (182)
T PF00765_consen 83 PAPRSPDVWELSRFCVDPDRRRSRAGSRSPVTMELLLGMVEFALSNGIRHIVGVVDP---AMERI-LRRAGWPVR 153 (182)
T ss_dssp ---SSTTEEEEEEEEE-HCCCHHCHSCC-THHHHHHHHHHHHHHCTT-SEEEEEEEH---HHHHH-HHHCT-EEE
T ss_pred CCCCCCcceeeeEEEEcccccccccccccHHHHHHHHHHHHHHHHCCCCEEEEEECh---HHHHH-HHHcCCceE
Confidence 1 22246788999999998542 24778999999999999999998876653 34566 999999863
No 86
>PRK13834 putative autoinducer synthesis protein; Provisional
Probab=96.52 E-value=0.08 Score=46.70 Aligned_cols=128 Identities=13% Similarity=0.004 Sum_probs=79.8
Q ss_pred cchHHHHHHHHHHhccCCCCccccccccccchhHH-hhcCCCceEEEEE-ECCeEEEEEEEEEeeccc-----c-----C
Q 019558 14 QIDRARVEDLERRCEVGPAERVFLFTDTLGDPICR-IRNSPMYKMLVAE-LDRELVGVIQGSIKQVTV-----Q-----K 81 (339)
Q Consensus 14 ~~D~~~v~~L~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~VAe-~~geiVG~i~~~~~~~~~-----~-----~ 81 (339)
.++++++.++..++|....+...... +.++. ....+...++++. ++|++||++.+....... | .
T Consensus 15 ~~~l~~~~rLR~~VF~~elgW~~~~~----~g~E~D~yD~~~~~yll~~~~~g~vvG~~RLlptt~p~ml~~~fp~l~~~ 90 (207)
T PRK13834 15 ASLLKQMHRLRARVFGGRLGWDVSIT----DGEERDQFDDLKPTYILAISDSGRVAGCARLLPAIGPTMLAQVFPQLLPA 90 (207)
T ss_pred HHHHHHHHHHHHHHhccccCCCCCCC----CCcCccCCCCCCCEEEEEEeCCCeEEEEEecccCCCcchhhhhcHHhcCC
Confidence 46677888888888654322111011 11111 0112234455555 468999999886442211 1 0
Q ss_pred C-CCCCccEEEEEEEEeCcccccC---C----HHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHHHHhhCCCEE
Q 019558 82 P-HEDLAKVGYVLGLRVAPLHRRK---G----IGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKLFVNKLGYVN 149 (339)
Q Consensus 82 ~-~~~~~~~~~I~~l~V~P~~Rgk---G----IG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY~k~GF~~ 149 (339)
+ ......+..++.++|+|++++. + +...|+..+.+++..+|+++++..+... -.++ +.++|+..
T Consensus 91 ~~~~~~~~v~E~SRf~V~~~~~~~~~~~~~~~~~~~L~~~~~~~a~~~Gi~~~~~v~~~~---~~r~-l~r~G~~~ 162 (207)
T PRK13834 91 GRLNAHPAMIESSRFCVDTALAEGRGGGQLHEATLTMFAGIIEWSMANGYTEIVTATDLR---FERI-LARAGWPM 162 (207)
T ss_pred CCCCCCCCEEEEeeeEEcccccccccccccCHHHHHHHHHHHHHHHHCCCCEEEEEECHH---HHHH-HHHcCCCe
Confidence 1 1123468899999999986422 2 6678999999999999999988766653 3455 89999875
No 87
>PF13880 Acetyltransf_13: ESCO1/2 acetyl-transferase
Probab=96.26 E-value=0.0059 Score=43.86 Aligned_cols=29 Identities=38% Similarity=0.514 Sum_probs=25.1
Q ss_pred EEEEEEEeCcccccCCHHHHHHHHHHHHH
Q 019558 90 GYVLGLRVAPLHRRKGIGSSLVCKLEEWF 118 (339)
Q Consensus 90 ~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a 118 (339)
.-|..+.|+|.+|++||+++||+.+.+..
T Consensus 6 ~GI~RIWV~~~~RR~GIAt~Lld~ar~~~ 34 (70)
T PF13880_consen 6 CGISRIWVSPSHRRKGIATRLLDAARENF 34 (70)
T ss_pred EEeEEEEeChhhhhhhHHHHHHHHHHHhc
Confidence 44788899999999999999999987653
No 88
>PRK10975 TDP-fucosamine acetyltransferase; Provisional
Probab=95.99 E-value=0.035 Score=48.13 Aligned_cols=150 Identities=11% Similarity=0.093 Sum_probs=90.1
Q ss_pred CCcEEEEEeccCChHHHHHHHhhCCCEEeecCeeeecccccccccCCCceeEeecCHHHHHHHHHHhcc---CCCC----
Q 019558 122 DVDYAYMATEKDNEASVKLFVNKLGYVNFRTPAILVHPVNNRMFHTPSNVQIRKLRIEEAENLYYKFMA---STEF---- 194 (339)
Q Consensus 122 g~~~i~l~v~~~N~~a~~lfY~k~GF~~~~~~~~~~~p~~~~~~~~~~~~~i~~l~~~da~~l~~~~~~---~~~~---- 194 (339)
+++.+.+-+...+..-..+ .+..||+..+....+..|+... +.|. .|++.+++|+..+.+.... ...+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~-l~~~g~~~~~~~~~~~~~~~~~--~~~~--~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~ 77 (194)
T PRK10975 3 AFSLVQAKVAASDTALLDA-LQQLGFQLVEGEVDFALPVGNA--SDTT--GARVATETDIPALRQLAAQAFAQSRFRAPW 77 (194)
T ss_pred ccceEEEEechhhhHHHHH-HHhcCCEeeeeEEEEEeecccc--CCCC--CcccCCcccHHHHHHHHHHHhhhccccCcc
Confidence 4556677777778777788 9999999888877777776432 2243 5667888887766554322 1111
Q ss_pred -CCCChhhhhhccC--------CcceEEEeeeCCcccccCCCCCCCCCceEEEEEEecC--cce--eccCCCChHHHHHH
Q 019558 195 -FPYDIGNILRNKL--------SLGTWVAYPRGEIVGEFGSNGQIFPKSWAMVSVWNSG--ELF--KLREGPLSGKMVRT 261 (339)
Q Consensus 195 -~p~d~~~~L~~~l--------~~gt~~a~~~~~~~~~~~~~~~~~~~~~a~~svw~~~--~~~--~l~~~~~~~~l~~~ 261 (339)
.+.+....+.+++ ....+++...++...| ++.++..+.. .+. -+.+..++..+.++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~~vG-----------~~~l~~~~~~~~~i~~~~V~p~~rg~Gig~~ 146 (194)
T PRK10975 78 YAPDDSGRFYAQWIENAVRGTFDHQCLLLRDASGQIQG-----------FVTLRELNDTDARIGLLAVFPGAQGRGIGAR 146 (194)
T ss_pred CChhHHHHHHHHHHHHhhccccCCcEEEEEcCCCCEEE-----------EEEEEecCCCceEEEEEEEChhhcCCCHHHH
Confidence 1112223332221 1123344433443333 2322211110 011 12366778889999
Q ss_pred HHHhhhhccccCCCCceEEEEeccccch
Q 019558 262 LCQFVHNMAGTKSKDCKVIVTEVGGSDA 289 (339)
Q Consensus 262 l~~~~~~~~~~~~~~~~~~~~~~~~~dp 289 (339)
|+.++.+.|+ +.||..+.+++...|+
T Consensus 147 Ll~~~~~~a~--~~g~~~i~l~v~~~N~ 172 (194)
T PRK10975 147 LMQAALNWCQ--ARGLTRLRVATQMGNL 172 (194)
T ss_pred HHHHHHHHHH--HcCCCEEEEEeCCCcH
Confidence 9999999998 8899999999988875
No 89
>TIGR03243 arg_catab_AOST arginine and ornithine succinyltransferase subunits. In many bacteria, the sole member of this protein family is arginine N-succinyltransferase (EC 2.3.1.109), the AstA protein of the arginine succinyltransferase (ast) pathway. However, in Pseudomonas aeruginosa and several other species, a tandem gene pair encodes alpha and beta subunits of a heterodimer that is designated arginine and ornithine succinyltransferase (AOST).
Probab=95.82 E-value=0.053 Score=50.87 Aligned_cols=143 Identities=20% Similarity=0.128 Sum_probs=79.8
Q ss_pred EEEEcCCcchHHHHHHHHHHhccCCCCccccccccccchhHHh--------hcCCCceEEEEEE--CCeEEEEEEEEEee
Q 019558 7 ITRSYDRQIDRARVEDLERRCEVGPAERVFLFTDTLGDPICRI--------RNSPMYKMLVAEL--DRELVGVIQGSIKQ 76 (339)
Q Consensus 7 ~IR~~~~~~D~~~v~~L~~~~~~~~~~~~~~~~~~~~~~l~~~--------~~~~~~~~~VAe~--~geiVG~i~~~~~~ 76 (339)
.||+++ ..|++++.+|.+....+...-|. -.+.+...+.+- ........||.|+ .|+|||++.+...-
T Consensus 1 vvRpv~-~~Dl~aL~~LA~~sg~G~TsLP~-d~~~L~~rI~~S~~sF~~~~~~~~~~YlFVLED~~tg~vvGts~I~a~v 78 (335)
T TIGR03243 1 IVRPVR-TSDLDALMQLARESGIGLTSLPA-DRAALGSRIARSEKSFAGESTRGEEGYLFVLEDTETGTVAGVSAIEAAV 78 (335)
T ss_pred CcccCc-cccHHHHHHHHHHcCCCcccCCC-CHHHHHHHHHHHHHHHhcccCCCCccEEEEEEeCCCCeEEEEEeEEecc
Confidence 379999 99999999998887554422221 112233332211 1123356778886 48999998774321
Q ss_pred ---ccccCCC-----------------------CCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHH---HhCCCcEEE
Q 019558 77 ---VTVQKPH-----------------------EDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWF---TSNDVDYAY 127 (339)
Q Consensus 77 ---~~~~~~~-----------------------~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a---~~~g~~~i~ 127 (339)
..+|+.. ..+.....|+.|.++|+||+-|.|+.|-+.-.=.. +++=.+.+.
T Consensus 79 G~~~PfY~yrv~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfL~p~~R~~~~G~LLSr~RfLFiA~~~erF~~~vi 158 (335)
T TIGR03243 79 GLDEPFYNYRVGTLVHASRELGVYNKIPTLTLSNDLTGSSELCTLFLDPDYRKGGNGRLLSRSRFLFIAAFRERFGDKII 158 (335)
T ss_pred cCCCCCEEEEcCceeecCcccCCccceeeEEeeccCCCCeeeEEEEECHHHcCCCchhhHHHHHHHHHHhhHhhhhhhhe
Confidence 1111100 11223457899999999999999998876543322 222122233
Q ss_pred EEe-ccCChHHHHHHHhhCCCEEee
Q 019558 128 MAT-EKDNEASVKLFVNKLGYVNFR 151 (339)
Q Consensus 128 l~v-~~~N~~a~~lfY~k~GF~~~~ 151 (339)
... ...++.+..-||+.+|-.-+.
T Consensus 159 AEmrG~~De~G~SPFWd~lg~hFF~ 183 (335)
T TIGR03243 159 AEMRGVSDEQGRSPFWEALGRHFFS 183 (335)
T ss_pred eeccCccCCCCCCccHHHhhccccC
Confidence 332 112222223378888866443
No 90
>TIGR03245 arg_AOST_alph arginine/ornithine succinyltransferase, alpha subunit. In some bacteria, including Pseudomonas aeruginosa, the astB gene (arginine N-succinyltransferase) is replaced by tandem paralogs that form a heterodimer. This heterodimer from P. aeruginosa is characterized as arginine and ornithine N-2 succinyltransferase (AOST). Members of this protein family represent the less widespread paralog, designated AruI, or arginine/ornithine succinyltransferase, alpha subunit.
Probab=95.81 E-value=0.062 Score=50.44 Aligned_cols=143 Identities=15% Similarity=0.122 Sum_probs=79.8
Q ss_pred EEEEcCCcchHHHHHHHHHHhccCCCCccccccccccchhHH----h---h--cCCCceEEEEEE--CCeEEEEEEEEEe
Q 019558 7 ITRSYDRQIDRARVEDLERRCEVGPAERVFLFTDTLGDPICR----I---R--NSPMYKMLVAEL--DRELVGVIQGSIK 75 (339)
Q Consensus 7 ~IR~~~~~~D~~~v~~L~~~~~~~~~~~~~~~~~~~~~~l~~----~---~--~~~~~~~~VAe~--~geiVG~i~~~~~ 75 (339)
.||+++ ..|++++.+|......+...-|. -.+.+...+.+ . . .......||.|+ .|+|||++.+...
T Consensus 1 viRpv~-~~Dl~aL~~LA~~sG~G~TsLP~-d~~~L~~rI~~S~~sF~~~~~~~~~~~YlFVLEDt~tg~vvGts~I~a~ 78 (336)
T TIGR03245 1 IVRPSR-FADLPAIERLANESAIGVTSLPA-DRAKLGEKIAQSERSFAAEVSFVGEERYLFVLEDTETGKLLGTSSIVAS 78 (336)
T ss_pred CcccCc-cccHHHHHHHHHHcCCCcccCCC-CHHHHHHHHHHHHHHHHhhcCCCCCccEEEEEEeCCCCcEEEEEeEEec
Confidence 379999 99999999999887654422211 11223333322 1 1 122356788886 4899999877432
Q ss_pred e---ccccCCC-----------------------CCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHH---HhCCCcEE
Q 019558 76 Q---VTVQKPH-----------------------EDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWF---TSNDVDYA 126 (339)
Q Consensus 76 ~---~~~~~~~-----------------------~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a---~~~g~~~i 126 (339)
- ..+|... ..+.....|+.|.++|+||+-|.|+.|-+.-.=.. +++=.+++
T Consensus 79 vG~~~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfL~p~~R~~~~G~lLSr~RfLFiA~~~erF~~~v 158 (336)
T TIGR03245 79 AGYGEPFYSYRNDTLIHASRELKVNNKIHVLYMCHELTGSSLLCSFYVDPRLRKTEAAELLSRARLLFMAAHRERFQSRI 158 (336)
T ss_pred ccCCCCCEEEEcCceeecCcccCCccceeeEEeeccCCCCeeeEEEEECHHHcCCCchhHHHHHHHHHHHhhHhhhhhhh
Confidence 1 1111100 11223457899999999999999988876543222 22212223
Q ss_pred EEEe-ccCChHHHHHHHhhCCCEEee
Q 019558 127 YMAT-EKDNEASVKLFVNKLGYVNFR 151 (339)
Q Consensus 127 ~l~v-~~~N~~a~~lfY~k~GF~~~~ 151 (339)
.... ...++.+..-||+.+|-.-+.
T Consensus 159 iAEmrG~~De~G~SPFWd~lg~hFF~ 184 (336)
T TIGR03245 159 IVEIQGVQDDNGDSPFWDAIGRHFFD 184 (336)
T ss_pred eeeccCccCCCCCCccHHHhhccccC
Confidence 3332 112222223368887765433
No 91
>TIGR03244 arg_catab_AstA arginine N-succinyltransferase. In many bacteria, the arginine succinyltransferase (ast) pathway operon consists of five genes, including this protein, arginine N-succinyltransferase (EC 2.3.1.109). In a few species, such as Pseudomonas aeruginosa, the member of this family is encoded adjacent to a paralog, and the two polypeptides form a heterodimeric enzyme, active on both arginine and ornithine. In such species, this polypeptide may be treated as the beta subunit of an enzyme that may be named either arginine N-succinyltransferase (AST) or arginine and orthithine N-succinyltransferase (AOST).
Probab=95.67 E-value=0.078 Score=49.84 Aligned_cols=106 Identities=20% Similarity=0.131 Sum_probs=65.5
Q ss_pred EEEEcCCcchHHHHHHHHHHhccCCCCccccccccccchhHHh-------hc-CCCceEEEEEE--CCeEEEEEEEEEee
Q 019558 7 ITRSYDRQIDRARVEDLERRCEVGPAERVFLFTDTLGDPICRI-------RN-SPMYKMLVAEL--DRELVGVIQGSIKQ 76 (339)
Q Consensus 7 ~IR~~~~~~D~~~v~~L~~~~~~~~~~~~~~~~~~~~~~l~~~-------~~-~~~~~~~VAe~--~geiVG~i~~~~~~ 76 (339)
.||+++ ..|++++.+|......+...-|. -.+.+...+.+- .. .+....||.|+ .|+|||++.+...-
T Consensus 1 vvRPv~-~~Dl~aL~~LA~~sg~G~TsLP~-d~~~L~~rI~~S~~sF~~~~~~~~~~YlFVLEDt~tg~vvGts~I~a~v 78 (336)
T TIGR03244 1 IVRPVE-TSDLDALYQLAQSTGIGLTSLPA-NEDLLSARIERAEKTFSGELTRAEQGYLFVLEDTETGTVAGVSAIEAAV 78 (336)
T ss_pred CcccCc-cccHHHHHHHHHHcCCCcccCCC-CHHHHHHHHHHHHHHhcCcCCCCCccEEEEEEeCCCCeEEEEEeEEecc
Confidence 379999 99999999999887544422211 112333333221 11 22356788887 48999998764321
Q ss_pred ---ccccCCC-----------------------CCCccEEEEEEEEeCcccccCCHHHHHHHHH
Q 019558 77 ---VTVQKPH-----------------------EDLAKVGYVLGLRVAPLHRRKGIGSSLVCKL 114 (339)
Q Consensus 77 ---~~~~~~~-----------------------~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~ 114 (339)
..+|+.. ..+.....|+.|.++|+||+-|.|+.|-+.-
T Consensus 79 G~~~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~SElctLfL~p~~R~~~~G~LLSr~R 142 (336)
T TIGR03244 79 GLEEPFYNYRVGTVVHASKELGIYKALETLFLSNDLTGYSELCTLFLDPDYRKGGNGRLLSKSR 142 (336)
T ss_pred cCCCCCEEEEcCceeecCcccCCceeeeeEEeeccCCCCeeeEEEEECHHHcCCcchhhHHHHH
Confidence 1111100 1122345689999999999999998886543
No 92
>PRK14852 hypothetical protein; Provisional
Probab=95.44 E-value=0.41 Score=51.23 Aligned_cols=144 Identities=10% Similarity=-0.024 Sum_probs=99.1
Q ss_pred CeEEEEEcCCcchHHHHHHHHHHhccCCCCccccccccccchhHHhhcCCCceEEEEEECCeEEEEEEEEEeeccc----
Q 019558 4 GEVITRSYDRQIDRARVEDLERRCEVGPAERVFLFTDTLGDPICRIRNSPMYKMLVAELDRELVGVIQGSIKQVTV---- 79 (339)
Q Consensus 4 ~~i~IR~~~~~~D~~~v~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~VAe~~geiVG~i~~~~~~~~~---- 79 (339)
..+.||.+++.+|+..+..|........ ++..- ......+..+-..|....|++...+++||..+........
T Consensus 27 dr~~~r~Aet~~e~~~~~~L~~~~Y~~~-Gy~~~--~ps~~~~~~~~~lp~t~~~i~k~~~~~l~T~t~~~ds~~~Gl~~ 103 (989)
T PRK14852 27 DRPAIKIAETPDEYTRAFRLVYEEYIRS-GYLKP--HPSRMYYNVWSILPATSVFIFKSYHDVLCTLTHIPDSGLFGLPM 103 (989)
T ss_pred cCcceeecCCHHHHHHHHHHHHHHHHHc-CCCCc--CcccccCCccccCCcceEEEeccCCcEEEEEEEecCCcccCcCH
Confidence 3467899988899999999988874422 21110 0111112233344656668887767788877665543221
Q ss_pred ---cCC----C-CCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHHHHh-hCCCEEe
Q 019558 80 ---QKP----H-EDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKLFVN-KLGYVNF 150 (339)
Q Consensus 80 ---~~~----~-~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY~-k~GF~~~ 150 (339)
|+. . ....+++.+..++++|+.|.+-+--.|++.+.+++...+++.+...|++.... ||+ -+||+..
T Consensus 104 D~lf~~eLd~lr~~Gr~v~EvtrLa~d~~~~~~~l~~~l~~~~~~y~~~~~~dd~~i~VnPkH~~----FY~r~l~f~~i 179 (989)
T PRK14852 104 DTLYKPEVDALRAQGRNVVEVGALATQYSRRWTNLMVFLAKAMFQYSMMSEVDDILVTVNPKHVK----FYTDIFLFKPF 179 (989)
T ss_pred HHHHHHHHHHHHHcCCeEEeeehheechhhcccchhHHHHHHHHHHHHHcCCCeEEEEECcchHH----HHHHHhCCccc
Confidence 100 0 23347889999999999998887778888888888888999999999988877 898 6899998
Q ss_pred ecCe
Q 019558 151 RTPA 154 (339)
Q Consensus 151 ~~~~ 154 (339)
+...
T Consensus 180 g~~r 183 (989)
T PRK14852 180 GEVR 183 (989)
T ss_pred cccc
Confidence 7643
No 93
>COG1243 ELP3 Histone acetyltransferase [Transcription / Chromatin structure and dynamics]
Probab=94.89 E-value=0.034 Score=53.87 Aligned_cols=83 Identities=13% Similarity=0.115 Sum_probs=54.9
Q ss_pred CeEEEEEEEEEeeccccC----CC-------CCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEecc
Q 019558 64 RELVGVIQGSIKQVTVQK----PH-------EDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEK 132 (339)
Q Consensus 64 geiVG~i~~~~~~~~~~~----~~-------~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~ 132 (339)
+-++|++.+.......+. +. ..++...-++. . .-.||-+|+|++||+.+++.|++.+..+|.+....
T Consensus 416 d~lig~lrlR~p~e~~~r~e~~~~~aivrelhvyg~~vpig~-~-~~~~QH~G~G~~L~~~AE~ia~ee~~~ki~viSgi 493 (515)
T COG1243 416 DILIGFLRLREPSEGAHREEIDDKTAIVRELHVYGSEVPIGK-R-EDEWQHRGYGRELLEEAERIAREEGAKKILVISGI 493 (515)
T ss_pred hhhhheeeecccccchhhhhcccchhhhhhhhcccccccccc-C-cchhhcccHHHHHHHHHHHHHHhhccccEEEEecc
Confidence 568999988765542211 00 01111112223 2 57789999999999999999999988888765544
Q ss_pred CChHHHHHHHhhCCCEEeec
Q 019558 133 DNEASVKLFVNKLGYVNFRT 152 (339)
Q Consensus 133 ~N~~a~~lfY~k~GF~~~~~ 152 (339)
.-.. ||+|+||+..+.
T Consensus 494 G~Re----Yy~k~GY~~~gp 509 (515)
T COG1243 494 GVRE----YYRKLGYELDGP 509 (515)
T ss_pred cHHH----HHHHhCccccCC
Confidence 4333 699999997543
No 94
>cd04264 DUF619-NAGS DUF619 domain of various N-acetylglutamate Synthases of the fungal arginine-biosynthetic pathway and urea cycle found in humans and fish. DUF619-NAGS: This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present in C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain function has yet to be characterized.
Probab=94.62 E-value=0.23 Score=38.34 Aligned_cols=66 Identities=15% Similarity=0.100 Sum_probs=47.6
Q ss_pred EEEEECCeEEEEEEEEEeeccccCCCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChH
Q 019558 58 LVAELDRELVGVIQGSIKQVTVQKPHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEA 136 (339)
Q Consensus 58 ~VAe~~geiVG~i~~~~~~~~~~~~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~ 136 (339)
+-+..++...|++.+..... ...+.|+..++|.|+.||+|+|..|++.+.+. ...+...+.++|+.
T Consensus 11 ~~~y~~e~y~~~aIvt~~~~--------~~~~~yLdKfaV~~~~~g~gvad~vf~~i~~d-----~~~L~Wrsr~~n~~ 76 (99)
T cd04264 11 HAIYLSEGYNAAAIVTYEGV--------NNGVPYLDKFAVSSSAQGEGTSDALWRRLRRD-----FPKLFWRSRKTNPI 76 (99)
T ss_pred eEEEEeCCceEEEEEeccCC--------CCCceEEEEEEEchhhhhcChHHHHHHHHHhh-----CCceEEEeCCCCcc
Confidence 44445566777776643221 12458999999999999999999999998764 34577777777775
No 95
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=94.14 E-value=0.22 Score=48.70 Aligned_cols=133 Identities=12% Similarity=0.187 Sum_probs=89.9
Q ss_pred CeEEEEEcCCcchHHHHHHHHHHhccCCCCccccccccccchhHHhhcCCCceEEEEEE-----CCeEEEEEEEEEeecc
Q 019558 4 GEVITRSYDRQIDRARVEDLERRCEVGPAERVFLFTDTLGDPICRIRNSPMYKMLVAEL-----DRELVGVIQGSIKQVT 78 (339)
Q Consensus 4 ~~i~IR~~~~~~D~~~v~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~VAe~-----~geiVG~i~~~~~~~~ 78 (339)
+.+++++++ ..+++.+.+|......-. -...+...+.+....+++....+-... |.-+||++....+.
T Consensus 412 m~l~vs~~d-e~~i~RIsQLtqkTNQFn----lTtkRy~e~dV~~~~~~~~~li~sv~l~DKfgDnGiigvviv~kk~-- 484 (574)
T COG3882 412 MRLTVSKFD-EVNIPRISQLTQKTNQFN----LTTKRYNEEDVRQMQEDPNFLIFSVSLKDKFGDNGIIGVVIVEKKE-- 484 (574)
T ss_pred EEEEEeecc-ccCcHHHHHHhhccccee----echhhhcHHHHHHHhhCCCeEEEEEEeccccccCceEEEEEEEecC--
Confidence 457889999 999999999976652111 111222334455566777666665543 35588888664433
Q ss_pred ccCCCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEe--ccCChHHHHHHHhhCCCEEeecC
Q 019558 79 VQKPHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMAT--EKDNEASVKLFVNKLGYVNFRTP 153 (339)
Q Consensus 79 ~~~~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v--~~~N~~a~~lfY~k~GF~~~~~~ 153 (339)
..-+|..+..+-.-=|++|-.+||..+++.|...|...+...- ...|.+-..| |+++||...++.
T Consensus 485 ---------~~w~IDt~lmSCRVlgRkvE~~l~~~~~e~A~~~gi~tir~~Y~pt~kN~pv~~F-yE~mgf~l~~en 551 (574)
T COG3882 485 ---------SEWFIDTFLMSCRVLGRKVEQRLMNSLEEQALSEGINTIRGYYIPTEKNAPVSDF-YERMGFKLKGEN 551 (574)
T ss_pred ---------CeEEhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcceeeeEecccccCCcHHHH-HHHhcccccccc
Confidence 1134444444445558999999999999999999998888774 4567775665 999999966653
No 96
>COG3138 AstA Arginine/ornithine N-succinyltransferase beta subunit [Amino acid transport and metabolism]
Probab=93.66 E-value=0.22 Score=45.36 Aligned_cols=105 Identities=20% Similarity=0.147 Sum_probs=61.9
Q ss_pred eEEEEEcCCcchHHHHHHHHHHhccCCCCccccccccccchhHHh--------hcCCCceEEEEEE--CCeEEEEEEEEE
Q 019558 5 EVITRSYDRQIDRARVEDLERRCEVGPAERVFLFTDTLGDPICRI--------RNSPMYKMLVAEL--DRELVGVIQGSI 74 (339)
Q Consensus 5 ~i~IR~~~~~~D~~~v~~L~~~~~~~~~~~~~~~~~~~~~~l~~~--------~~~~~~~~~VAe~--~geiVG~i~~~~ 74 (339)
++.+||++ ..|++++.+|......+...-|. -...+.+.+..- ........+|.|+ .|++||+..+..
T Consensus 1 mlvvRP~~-~aDl~al~~LA~~sg~G~TsLP~-de~~L~~Ri~~se~sf~~~~~~ge~~Y~fVLEDsetG~VvG~saI~a 78 (336)
T COG3138 1 MLVVRPVE-RADLEALMELAVKTGVGLTSLPA-DEATLRARIERSEKSFQGELPPGEAGYLFVLEDSETGTVVGISAIEA 78 (336)
T ss_pred Cccccccc-ccCHHHHHHHHHhcCCCcccCCC-CHHHHHHHHHHHHHHHhcccCCCCccEEEEEEecCCceEEeEEEEEE
Confidence 46799999 99999999998887554433221 112333333221 1123356778888 599999876532
Q ss_pred ee---ccccCCC-----------------------CCCccEEEEEEEEeCcccccCCHHHHHH
Q 019558 75 KQ---VTVQKPH-----------------------EDLAKVGYVLGLRVAPLHRRKGIGSSLV 111 (339)
Q Consensus 75 ~~---~~~~~~~-----------------------~~~~~~~~I~~l~V~P~~RgkGIG~~Ll 111 (339)
.- ..+|... ........++.+.++|+||.-|.|+.|-
T Consensus 79 ~vGl~~PfYsyRv~tlvhaS~~L~v~~~i~~L~L~Nd~TG~SEl~sLFl~pd~Rkg~nG~Lls 141 (336)
T COG3138 79 AVGLNDPFYSYRVGTLVHASPELNVYNEIPTLFLSNDLTGNSELCTLFLDPDWRKGGNGRLLS 141 (336)
T ss_pred eeccCCccceeeeeeeeecCccccccccceeEEEeccCcCchhhhheeecHHHhcccchhhhh
Confidence 11 1111100 0011234578899999999766666543
No 97
>PF02799 NMT_C: Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain; InterPro: IPR022677 Myristoyl-CoA:protein N-myristoyltransferase (2.3.1.97 from EC) (Nmt) [] is the enzyme responsible for transferring a myristate group on the N-terminal glycine of a number of cellular eukaryotics and viral proteins. Nmt is a monomeric protein of about 50 to 60kDa whose sequence appears to be well conserved. The N and C-terminal domains of NMT are structurally similar, each adopting an acyl-CoA N-acyltransferase-like fold. This entry represents the C-terminal region.; GO: 0004379 glycylpeptide N-tetradecanoyltransferase activity; PDB: 2P6G_B 2P6F_F 2P6E_A 1IIC_A 1IID_A 2NMT_A 2WUU_A 1IYL_B 1NMT_B 1IYK_A ....
Probab=93.38 E-value=4.8 Score=34.83 Aligned_cols=130 Identities=13% Similarity=0.018 Sum_probs=78.7
Q ss_pred EEEcCCcchHHHHHHHHHHhccCCCCccccccccccchhHHhhcCCCceEEEEEEC-CeEEEEEEEEEeeccccCC-CCC
Q 019558 8 TRSYDRQIDRARVEDLERRCEVGPAERVFLFTDTLGDPICRIRNSPMYKMLVAELD-RELVGVIQGSIKQVTVQKP-HED 85 (339)
Q Consensus 8 IR~~~~~~D~~~v~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~VAe~~-geiVG~i~~~~~~~~~~~~-~~~ 85 (339)
+|+++ ++|++++.+|.+.-.-...-.+.+..+...+.+.. ...--..+|.+++ |+|-.+++...-+....+. ...
T Consensus 31 lR~m~-~~Dv~~v~~Ll~~yl~~f~l~~~fs~eev~Hw~lp--~~~Vv~syVve~~~~~ITDf~SFY~Lpstvi~~~k~~ 107 (190)
T PF02799_consen 31 LRPME-EKDVPQVTKLLNKYLKKFDLAPVFSEEEVKHWFLP--RKNVVYSYVVEDPDGKITDFFSFYSLPSTVIGNPKHK 107 (190)
T ss_dssp EEE---GGGHHHHHHHHHHHHTTSSEEEE--HHHHHHHHS---BTTTEEEEEEEETTSEEEEEEEEEEEEEEESSSSSSS
T ss_pred cccCc-hhhHHHHHHHHHHHHHhcccccccCHHHHHhhccc--CCCeEEEEEEecCCCceeeEEEEeecceeecCCCCcc
Confidence 89999 99999999998876322222222222222222111 1122456777776 5999999887766543211 122
Q ss_pred CccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHHHHhhCCCEE
Q 019558 86 LAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKLFVNKLGYVN 149 (339)
Q Consensus 86 ~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY~k~GF~~ 149 (339)
..+.+|+.-.+ .-.- =-+.||..++-.|+..|++-.-.-..-+|.. |.+.++|.+
T Consensus 108 ~l~aAY~fY~~-~~~~----~l~~Lm~DaLi~Ak~~gfDVFNaLd~mdN~~----fL~~lKFg~ 162 (190)
T PF02799_consen 108 TLKAAYSFYYV-ATST----RLKELMNDALILAKNEGFDVFNALDLMDNSS----FLEDLKFGP 162 (190)
T ss_dssp EEEEEEEEEEE-ESSS----HHHHHHHHHHHHHHHTTESEEEEESTTTGGG----TTTTTT-EE
T ss_pred ceeeeeeeeee-ecCC----CHHHHHHHHHHHHHHcCCCEEehhhhccchh----hHhhCCccC
Confidence 34566654332 2221 2468999999999999998777767778887 799999985
No 98
>cd04265 DUF619-NAGS-U DUF619 domain of various N-acetylglutamate Synthases (NAGS) of the urea (U) cycle of humans and fish. This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present in C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain function has yet to be characterized.
Probab=93.12 E-value=0.7 Score=35.68 Aligned_cols=44 Identities=20% Similarity=0.280 Sum_probs=36.2
Q ss_pred cEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChH
Q 019558 88 KVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEA 136 (339)
Q Consensus 88 ~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~ 136 (339)
.+.|+..++|.|+.||+|+|..|++.+.+.. ..+...+.++|+.
T Consensus 33 ~~~yLdKfaV~~~~~g~gv~d~vf~~i~~d~-----~~L~Wrsr~~n~~ 76 (99)
T cd04265 33 GVPYLDKFAVSSSAQGEGTGEALWRRLRRDF-----PKLFWRSRSTNPI 76 (99)
T ss_pred CceEEEEEEEchhhhhcChHHHHHHHHHhhC-----CceEEEeCCCCcc
Confidence 4589999999999999999999999987653 3466777777764
No 99
>KOG2535 consensus RNA polymerase II elongator complex, subunit ELP3/histone acetyltransferase [Chromatin structure and dynamics; Transcription]
Probab=93.07 E-value=0.15 Score=47.73 Aligned_cols=50 Identities=16% Similarity=0.195 Sum_probs=39.5
Q ss_pred cccccCCHHHHHHHHHHHHHHh-CCCcEEEEEeccCChHHHHHHHhhCCCEEeec
Q 019558 99 PLHRRKGIGSSLVCKLEEWFTS-NDVDYAYMATEKDNEASVKLFVNKLGYVNFRT 152 (339)
Q Consensus 99 P~~RgkGIG~~Ll~~~~~~a~~-~g~~~i~l~v~~~N~~a~~lfY~k~GF~~~~~ 152 (339)
..||-||+|+.||++++..|++ +|-.+|.+........ +|+|+||+..+.
T Consensus 497 ~KfQHQG~GtLLmeEAERIAr~EHgS~KiavISGVGtR~----YY~klGY~LdGP 547 (554)
T KOG2535|consen 497 TKFQHQGFGTLLMEEAERIAREEHGSGKIAVISGVGTRN----YYRKLGYELDGP 547 (554)
T ss_pred hhhhhcchhhHHHHHHHHHHHHhcCCCceEEEeccchHH----HHHhhCeeecCh
Confidence 3588999999999999999996 6887776655554443 799999997543
No 100
>COG3916 LasI N-acyl-L-homoserine lactone synthetase [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=92.34 E-value=4.3 Score=35.52 Aligned_cols=126 Identities=12% Similarity=0.020 Sum_probs=75.7
Q ss_pred cchHHHHHHHHHHhccCCCC-----ccccccccccchhHHhhcCCCceEEEE-EECCeEEEEEEEEEeeccc--------
Q 019558 14 QIDRARVEDLERRCEVGPAE-----RVFLFTDTLGDPICRIRNSPMYKMLVA-ELDRELVGVIQGSIKQVTV-------- 79 (339)
Q Consensus 14 ~~D~~~v~~L~~~~~~~~~~-----~~~~~~~~~~~~l~~~~~~~~~~~~VA-e~~geiVG~i~~~~~~~~~-------- 79 (339)
+.-++++..+..+.|...-+ ......+++.+ ....++++ ..+|+|+|++.+-.-....
T Consensus 14 ~~~l~em~rlR~~vF~erL~W~v~~~~g~E~DqyD~--------~~t~Yll~~~~~g~I~G~~RlLptt~P~mL~~vF~~ 85 (209)
T COG3916 14 PKALEEMHRLRYQVFKERLGWDVVCIDGFEIDQYDN--------LDTVYLLALTSDGRIVGCVRLLPTTGPYMLTDVFPA 85 (209)
T ss_pred HHHHHHHHHHHHHHHHHhcCCceeccCCccccccCC--------CCceEEEEEcCCCcEEEEEEeccCCCcchhhhhhHH
Confidence 45567778887777553322 11111122221 22445566 6689999999885433211
Q ss_pred -cC-CCCC-CccEEEEEEEEeCc--ccccC---C-HHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHHHHhhCCCEEe
Q 019558 80 -QK-PHED-LAKVGYVLGLRVAP--LHRRK---G-IGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKLFVNKLGYVNF 150 (339)
Q Consensus 80 -~~-~~~~-~~~~~~I~~l~V~P--~~Rgk---G-IG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY~k~GF~~~ 150 (339)
.. +... ...+-..+.++|++ .-|.. . ++..|+..+.+++..+|++.|...+...= -+. .++.||...
T Consensus 86 Ll~~~~~P~~p~vwEsSRF~vd~~~a~~~~g~~~~a~~el~~g~ie~a~~~G~~~IvtVt~~~m---eri-l~r~Gw~~~ 161 (209)
T COG3916 86 LLEGGPPPSSPGVWESSRFAVDKPSARRAAGGVSPAAYELFAGMIEYALARGITGIVTVTDTGM---ERI-LRRAGWPLT 161 (209)
T ss_pred HhcCCCCCCCCCeEEEeeeeeccccchhhcCCccHHHHHHHHHHHHHHHHcCCceEEEEEchHH---HHH-HHHcCCCeE
Confidence 01 1111 22455677787876 33332 3 47899999999999999999977665543 344 889999764
Q ss_pred e
Q 019558 151 R 151 (339)
Q Consensus 151 ~ 151 (339)
+
T Consensus 162 r 162 (209)
T COG3916 162 R 162 (209)
T ss_pred E
Confidence 3
No 101
>KOG2779 consensus N-myristoyl transferase [Lipid transport and metabolism]
Probab=91.95 E-value=2.6 Score=39.77 Aligned_cols=165 Identities=13% Similarity=0.165 Sum_probs=87.9
Q ss_pred eEEEEEE--CCeEEEEEEEEEeeccccCCCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEE-E--EEe
Q 019558 56 KMLVAEL--DRELVGVIQGSIKQVTVQKPHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYA-Y--MAT 130 (339)
Q Consensus 56 ~~~VAe~--~geiVG~i~~~~~~~~~~~~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i-~--l~v 130 (339)
..++... .+++||||++....... .....+++.|..|+||...|+++++--|++++-.++.-.|+=+. + -.+
T Consensus 135 WHiGVRv~~s~kLVaFIsaiP~~irv---rdk~vk~veINFLCVHKkLRSKRlaPvLIrEITRRvnl~gIfqA~yTaGvv 211 (421)
T KOG2779|consen 135 WHIGVRVKSSKKLVAFISAIPATIRV---RDKVVKMVEINFLCVHKKLRSKRLAPVLIREITRRVNLEGIFQAAYTAGVV 211 (421)
T ss_pred eEEEEEEecCCceEEEEeccccEEEE---ccceeeeeeEEEEEEehhhhccccccHHHHHHHHHhhhhhhhhHhhhccee
Confidence 3344443 46999999886655443 12344678899999999999999999999999888765442111 1 112
Q ss_pred ccCChHH----------HHHHHhhCCCEEeecCeeeeccc-ccccccCCCceeEeecCHH---HHHHHHHHhccCCCCCC
Q 019558 131 EKDNEAS----------VKLFVNKLGYVNFRTPAILVHPV-NNRMFHTPSNVQIRKLRIE---EAENLYYKFMASTEFFP 196 (339)
Q Consensus 131 ~~~N~~a----------~~lfY~k~GF~~~~~~~~~~~p~-~~~~~~~~~~~~i~~l~~~---da~~l~~~~~~~~~~~p 196 (339)
.+.+..- .+| | -.||.......-..... ....+.-+..-..|++... ++..|+++.+...++.|
T Consensus 212 Lp~PVstcRY~HRsLNpkKL-~-dv~Fs~l~~~mTm~rt~klykLP~~~~T~G~R~me~kDvp~V~~Ll~~yl~qf~la~ 289 (421)
T KOG2779|consen 212 LPKPVSTCRYWHRSLNPKKL-I-DVGFSHLSRNMTMQRTIKLYKLPETTKTPGLREMEEKDVPAVFRLLRNYLKQFELAP 289 (421)
T ss_pred eccccchhhhhhccCChhHe-e-EeccccccccchHhhhHhhccCCCCCCCCCcccccccchHHHHHHHHHHHHheeccc
Confidence 2222211 122 2 24665333211110100 0001111111234445444 45567777777777766
Q ss_pred CChhhhhhccC-Cc----ceEEEeeeCCcccccC
Q 019558 197 YDIGNILRNKL-SL----GTWVAYPRGEIVGEFG 225 (339)
Q Consensus 197 ~d~~~~L~~~l-~~----gt~~a~~~~~~~~~~~ 225 (339)
.=.+.-+.+|+ -. -+|++-...+...+|-
T Consensus 290 ~f~~eev~Hwf~p~e~VV~syVvesp~g~ITDF~ 323 (421)
T KOG2779|consen 290 VFDEEEVEHWFLPRENVVYSYVVESPNGKITDFC 323 (421)
T ss_pred ccCHHHhHhhcccccceEEEEEEECCCCccccee
Confidence 63333344443 22 3777766555455554
No 102
>PRK01305 arginyl-tRNA-protein transferase; Provisional
Probab=91.81 E-value=2.8 Score=37.76 Aligned_cols=76 Identities=14% Similarity=0.131 Sum_probs=52.9
Q ss_pred EEECCeEEEEEEEEEeeccccCCCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHH
Q 019558 60 AELDRELVGVIQGSIKQVTVQKPHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVK 139 (339)
Q Consensus 60 Ae~~geiVG~i~~~~~~~~~~~~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~ 139 (339)
...+|++||++..-+-+... .. .| ..-+|++-.+++|+-.+=..+++|++.|.++++|.-...+-+.++
T Consensus 149 y~~~g~LiaVav~D~l~d~l-------SA-VY---~FyDPd~~~~SLG~~~iL~qI~~ak~~gl~y~YLGY~I~~c~kM~ 217 (240)
T PRK01305 149 FRGDGKLVAVAVTDVLDDGL-------SA-VY---TFYDPDEEHRSLGTFAILWQIELAKRLGLPYVYLGYWIKGSRKMN 217 (240)
T ss_pred EEeCCeEEEEEEEeccCCce-------ee-EE---EeeCCCccccCCHHHHHHHHHHHHHHcCCCeEeeeEEECCCCccc
Confidence 34689999998664433111 01 11 235999999999999999999999999999999996665554333
Q ss_pred HHHhhCCCEE
Q 019558 140 LFVNKLGYVN 149 (339)
Q Consensus 140 lfY~k~GF~~ 149 (339)
| |.-|.+
T Consensus 218 --Y-K~~f~P 224 (240)
T PRK01305 218 --Y-KARFRP 224 (240)
T ss_pred --c-cccCCc
Confidence 2 455554
No 103
>PF04377 ATE_C: Arginine-tRNA-protein transferase, C terminus; InterPro: IPR007472 Arginine-tRNA-protein transferase catalyses the post-translational conjugation of arginine to the N terminus of a protein. In eukaryotes, this functions as part of the N terminus rule pathway of protein degradation by conjugating a destabilising amino acid to the N-terminal aspartate or glutamate of a protein, targeting the protein for ubiquitin-dependent proteolysis. N-terminal cysteine is sometimes modified []. In Saccharomyces cerevisiae, Cys20, 23, 94 and/or 95 are thought to be important for activity []. Of these, only Cys 94 appears to be completely conserved in this family. This entry represents the C-terminal region of the enzyme arginine-tRNA-protein transferase, found in both eukaryotic and prokaryotic enzymes.; GO: 0004057 arginyltransferase activity, 0016598 protein arginylation
Probab=91.78 E-value=0.8 Score=37.11 Aligned_cols=77 Identities=16% Similarity=0.118 Sum_probs=53.2
Q ss_pred EEEECCeEEEEEEEEEeeccccCCCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHH
Q 019558 59 VAELDRELVGVIQGSIKQVTVQKPHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASV 138 (339)
Q Consensus 59 VAe~~geiVG~i~~~~~~~~~~~~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~ 138 (339)
-...+|++||++..-+-+... ..+.+ .-+|++..+++|+-.+=..+++|++.|.+++++.-...+-+.+
T Consensus 43 ~~~~~~kLiav~v~D~l~~gl-------SaVY~----fyDPd~~~~SlG~~~iL~eI~~a~~~~l~y~YLGY~I~~c~kM 111 (128)
T PF04377_consen 43 EYRLDGKLIAVAVVDILPDGL-------SAVYT----FYDPDYSKRSLGTYSILREIELARELGLPYYYLGYWIHGCPKM 111 (128)
T ss_pred EEEeCCeEEEEEEeecccchh-------hheee----eeCCCccccCcHHHHHHHHHHHHHHcCCCEEeeCeEeCCCCcc
Confidence 345689999998664433111 11111 3599999999999999999999999999999998655554433
Q ss_pred HHHHhhCCCEE
Q 019558 139 KLFVNKLGYVN 149 (339)
Q Consensus 139 ~lfY~k~GF~~ 149 (339)
+ | |..|.+
T Consensus 112 ~--Y-K~~f~P 119 (128)
T PF04377_consen 112 N--Y-KARFRP 119 (128)
T ss_pred c--c-hhcCCc
Confidence 3 2 555554
No 104
>KOG3698 consensus Hyaluronoglucosaminidase [Posttranslational modification, protein turnover, chaperones]
Probab=91.76 E-value=0.71 Score=45.98 Aligned_cols=146 Identities=11% Similarity=0.028 Sum_probs=89.8
Q ss_pred eEEEEEcCCcchHHHHHHHHHHhccCCC-Ccccc-ccccccchhH-HhhcCCCceEEEEEEC-CeEEEEEEEEEeecccc
Q 019558 5 EVITRSYDRQIDRARVEDLERRCEVGPA-ERVFL-FTDTLGDPIC-RIRNSPMYKMLVAELD-RELVGVIQGSIKQVTVQ 80 (339)
Q Consensus 5 ~i~IR~~~~~~D~~~v~~L~~~~~~~~~-~~~~~-~~~~~~~~l~-~~~~~~~~~~~VAe~~-geiVG~i~~~~~~~~~~ 80 (339)
-+.|||+. ..|-+.+..+.+....... .-+-. ..+..++.+- .++.-..+.++|+++. ++|||++++......+.
T Consensus 679 ~y~iRPy~-~~De~~v~~~ct~my~d~g~~lpf~n~pn~~~d~liggllsls~~lC~v~~de~~~i~gYa~a~~Dvt~F~ 757 (891)
T KOG3698|consen 679 FYDIRPYT-IADEEYVSGMCTVMYTDNGELLPFRNAPNFADDNLIGGLLSLSEHLCEVVDDEGHKIVGYASAHFDVTLFS 757 (891)
T ss_pred eEeeccCc-cccHHHHHhhhhheeccCceeccCCCCCccccccchhheeccChhheeeeecCCCceeEEeeeecccchhh
Confidence 37899999 9999999999776532110 00000 1112233322 2333333688888875 67999998865332110
Q ss_pred ---------------CC--------C--------------C-----CCc--------cEEEEEEEEeCcccccCCHHHHH
Q 019558 81 ---------------KP--------H--------------E-----DLA--------KVGYVLGLRVAPLHRRKGIGSSL 110 (339)
Q Consensus 81 ---------------~~--------~--------------~-----~~~--------~~~~I~~l~V~P~~RgkGIG~~L 110 (339)
.+ . . .+. ..-.+....+..+.---|+.+++
T Consensus 758 rn~~i~w~~~l~EKY~~~i~p~~~g~~~~~~~e~i~~S~h~~~~~~~~~~~P~~~~~nfPa~v~~~~~~~a~D~~~~k~m 837 (891)
T KOG3698|consen 758 RNFLITWKEKLKEKYRGLIEPIGSGKLTDEYIEFIQNSQHPMDIEEWYPKIPDQIFENFPAWVETYFGMDASDAHPMKKM 837 (891)
T ss_pred hceeeeeHHHHHHHhhccccccCCchhHHHHHHHHHHccCccchhhccccCcHHHHhcChHHHhhccccccccchHHHHH
Confidence 00 0 0 000 00000111123333356899999
Q ss_pred HHHHHHHHHhCCCcEEEEEeccCChHHHHHHHhhCCCEEeec
Q 019558 111 VCKLEEWFTSNDVDYAYMATEKDNEASVKLFVNKLGYVNFRT 152 (339)
Q Consensus 111 l~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY~k~GF~~~~~ 152 (339)
++-+...++.+|.....+.|..+..+-+++ |.++|+...+.
T Consensus 838 ~~vll~tL~aNGsrGaf~~V~~dD~~~~~f-ys~lG~~d~~~ 878 (891)
T KOG3698|consen 838 IQVLLVTLAANGSRGAFLTVAIDDIERQKF-YSELGLTDLGL 878 (891)
T ss_pred HHHHHHHHHhcCCcceeEEechhHHHHHHH-HHHhchHHHhH
Confidence 999999999999999999999999887776 99999986554
No 105
>KOG4601 consensus Uncharacterized conserved protein [Function unknown]
Probab=91.60 E-value=0.81 Score=40.42 Aligned_cols=81 Identities=15% Similarity=0.185 Sum_probs=50.9
Q ss_pred CeEEEEEEEEEeeccccCCC--CCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHHH
Q 019558 64 RELVGVIQGSIKQVTVQKPH--EDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKLF 141 (339)
Q Consensus 64 geiVG~i~~~~~~~~~~~~~--~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~lf 141 (339)
+.|.|++....+....++.. .......+|..++|+++.||+|.|.+|++++++. .+.+---+.++.....-++|.
T Consensus 81 s~l~GllKVG~KkLfl~D~~~~~ye~e~lcILDFyVheS~QR~G~G~~lfdyMl~k---E~vephQ~a~DrPS~kLl~Fm 157 (264)
T KOG4601|consen 81 SILKGLLKVGYKKLFLTDNEQNQYEEEALCILDFYVHESEQRSGNGFKLFDYMLKK---ENVEPHQCAFDRPSAKLLQFM 157 (264)
T ss_pred hheeeeehccceeEEEeccHhhhhccCCceEEEEEeehhhhhcCchHHHHHHHHHh---cCCCchheeccChHHHHHHHH
Confidence 56888887766654432221 2234567899999999999999999999999873 233323334444444445542
Q ss_pred HhhCCC
Q 019558 142 VNKLGY 147 (339)
Q Consensus 142 Y~k~GF 147 (339)
-++.|-
T Consensus 158 ~khYgl 163 (264)
T KOG4601|consen 158 EKHYGL 163 (264)
T ss_pred HHhcCc
Confidence 233443
No 106
>TIGR03019 pepcterm_femAB FemAB-related protein, PEP-CTERM system-associated. Members of this protein family are found always as part of extended exopolysaccharide biosynthesis loci in bacteria. In nearly every case, these loci contain determinants for the processing of the PEP-CTERM proposed C-terminal protein sorting signal. This family shows remote, local sequence similarity to the FemAB protein family (see pfam02388), whose members
Probab=91.02 E-value=4.5 Score=38.09 Aligned_cols=88 Identities=8% Similarity=-0.063 Sum_probs=60.7
Q ss_pred ceEEEEE-ECCeEEEEEEEEEeeccccCCCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccC
Q 019558 55 YKMLVAE-LDRELVGVIQGSIKQVTVQKPHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKD 133 (339)
Q Consensus 55 ~~~~VAe-~~geiVG~i~~~~~~~~~~~~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~ 133 (339)
..+++++ .+|++||.+........ .+..-...++++|..+-+..|.-++++++.++|++...+.....
T Consensus 195 ~~l~~a~~~~g~~va~~l~~~~~~~-----------~~~~~~g~~~~~~~~~~~~lL~w~~i~~a~~~G~~~fDfG~s~~ 263 (330)
T TIGR03019 195 CEVLTVRLGDGVVASAVLSFYFRDE-----------VLPYYAGGLREARDVAANDLMYWELMRRACERGLRVFDFGRSKR 263 (330)
T ss_pred EEEEEEEeCCCCEEEEEEEEEeCCE-----------EEEEeccChHHHHhhChHHHHHHHHHHHHHHCCCcEEEcCCCCC
Confidence 4456677 68999987755333211 22112346799999999999999999999999999888875443
Q ss_pred ChHHHHHHHhhCCCEEeecCe
Q 019558 134 NEASVKLFVNKLGYVNFRTPA 154 (339)
Q Consensus 134 N~~a~~lfY~k~GF~~~~~~~ 154 (339)
+.. .--|-++.|+++.....
T Consensus 264 ~~G-~~~FK~~~G~~~~~l~~ 283 (330)
T TIGR03019 264 GTG-PFKFKKNWGFEPQPLHY 283 (330)
T ss_pred CCc-cHHHHhcCCCeeccceE
Confidence 333 33346778998765543
No 107
>PF01853 MOZ_SAS: MOZ/SAS family; InterPro: IPR002717 Moz is a monocytic leukemia Zn_finger protein and the SAS protein from Saccharomyces cerevisiae (Baker's yeast) is involved in silencing the Hmr locus. These proteins were reported to be homologous to acetyltransferases [] but this similarity is not supported by standard sequence analysis.; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 3TO6_A 1MJA_A 1MJ9_A 3TO7_A 3TO9_A 1MJB_A 1FY7_A 2OZU_A 2RC4_A 2OU2_A ....
Probab=90.72 E-value=1.2 Score=38.43 Aligned_cols=34 Identities=21% Similarity=0.129 Sum_probs=27.0
Q ss_pred EEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCC
Q 019558 90 GYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDV 123 (339)
Q Consensus 90 ~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~ 123 (339)
.-+.-+.|.|.||++|+|+.|++..-+-++..+.
T Consensus 81 ~NLsCIl~lP~yQrkGyG~~LI~fSY~LSr~e~~ 114 (188)
T PF01853_consen 81 NNLSCILTLPPYQRKGYGRFLIDFSYELSRREGK 114 (188)
T ss_dssp EEESEEEE-GGGTTSSHHHHHHHHHHHHHHHTTS
T ss_pred eeEeehhhcchhhhcchhhhhhhhHHHHhhccCc
Confidence 3455678999999999999999998887776653
No 108
>PF04768 DUF619: Protein of unknown function (DUF619); InterPro: IPR006855 This region of unknown function is found at the C terminus of Neurospora crassa acetylglutamate synthase (2.7.2.8 from EC). It is also found C-terminal to the amino acid kinase region in some fungal acetylglutamate kinase enzymes (IPR001048 from INTERPRO). These enzymes play a role in arginine biosynthesis.; PDB: 3S6K_A 4AB7_F 3ZZF_B 3ZZI_D 3ZZH_A 3ZZG_A 3S6G_Y 3S6H_A 3S7Y_A.
Probab=90.69 E-value=1.9 Score=36.79 Aligned_cols=110 Identities=17% Similarity=0.258 Sum_probs=65.3
Q ss_pred hHHHHHHHHHHhccCCCCccccccccccchhHHhhcCCCceEEEEEECCeEEEEEEEEEeeccccCCCCCCccEEEEEEE
Q 019558 16 DRARVEDLERRCEVGPAERVFLFTDTLGDPICRIRNSPMYKMLVAELDRELVGVIQGSIKQVTVQKPHEDLAKVGYVLGL 95 (339)
Q Consensus 16 D~~~v~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~VAe~~geiVG~i~~~~~~~~~~~~~~~~~~~~~I~~l 95 (339)
|.+.+.++....+.+. ....+.+.++...+ ...++ +|..-|.+.+.... ......++|+..+
T Consensus 33 d~~kL~~ll~~sf~~~--------~~v~~yl~~l~~~~-~~iy~---d~~y~~~AIVt~e~------~~~~~~v~yLdKF 94 (170)
T PF04768_consen 33 DLDKLRALLERSFGGK--------LDVDHYLDRLNNRL-FKIYV---DEDYEGAAIVTPEG------PDSNGPVPYLDKF 94 (170)
T ss_dssp -HHHHHHHHHHHSTSS--------SBHTTHHHHHHTS--SEEEE---ETTSSEEEEEEEE-------SCTCTSEEEEEEE
T ss_pred CHHHHHHHHHhccccc--------ccHHHHHHHhhccc-eEEEE---eCCceEEEEEEecC------CCCCCCCeEEEEE
Confidence 7888888888887222 12334455554444 33333 33444444443322 1123357999999
Q ss_pred EeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHHHHhhC-CCEE
Q 019558 96 RVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKLFVNKL-GYVN 149 (339)
Q Consensus 96 ~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY~k~-GF~~ 149 (339)
+|.|+.||.|++..++..+.+.. +.+...+..+|+. .+.|++|. |+-.
T Consensus 95 av~~~~~g~gv~D~vf~~i~~d~-----p~L~Wrsr~~n~~-~~Wyf~rs~G~~~ 143 (170)
T PF04768_consen 95 AVSKSAQGSGVADNVFNAIRKDF-----PKLFWRSREDNPN-NKWYFERSDGSFK 143 (170)
T ss_dssp EE-HHHHHTTHHHHHHHHHHHH------SSEEEEEETT-TT-HHHHHHH-SEEEE
T ss_pred EecchhhhcCHHHHHHHHHHHhc-----cceEEEecCCCCc-ccEEEEeeEEEEE
Confidence 99999999999999999996643 2266777777765 56656554 5443
No 109
>PF13444 Acetyltransf_5: Acetyltransferase (GNAT) domain
Probab=89.94 E-value=1 Score=34.67 Aligned_cols=57 Identities=21% Similarity=0.147 Sum_probs=38.2
Q ss_pred ceEEEEEECC-eEEEEEEEEEeeccc-----c-----C--C-CCCCccEEEEEEEEeCcccccCCHHHHHH
Q 019558 55 YKMLVAELDR-ELVGVIQGSIKQVTV-----Q-----K--P-HEDLAKVGYVLGLRVAPLHRRKGIGSSLV 111 (339)
Q Consensus 55 ~~~~VAe~~g-eiVG~i~~~~~~~~~-----~-----~--~-~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll 111 (339)
...+++.+++ ++||++.+....... + + . .....+++.++.++|+|+||+......|+
T Consensus 30 ~~h~lv~~~~~~~VGt~Rl~~~~~~~~~~~~~~~~~f~l~~~~~~~~~~~EisRl~V~~~~R~~~~~~~L~ 100 (101)
T PF13444_consen 30 SVHLLVRDKNTEVVGTVRLILPSPAGPLEGFYSESEFDLDPLLPLPRRVAEISRLCVHPEYRRRKVLLLLW 100 (101)
T ss_pred ccEEEEEECCCCEEEEEEeeccccccccccCCchhhcCcchhhccCCcEEEeehheECHhHCCChHHHHHh
Confidence 4445555544 599999986654321 1 0 0 11224789999999999999988887775
No 110
>KOG2036 consensus Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only]
Probab=89.45 E-value=0.87 Score=46.59 Aligned_cols=33 Identities=24% Similarity=0.410 Sum_probs=29.4
Q ss_pred EEEEEEEEeCcccccCCHHHHHHHHHHHHHHhC
Q 019558 89 VGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSN 121 (339)
Q Consensus 89 ~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~ 121 (339)
.+-|..++|+|+|+++|+|++-++-+.+++..+
T Consensus 614 GaRIVRIAvhP~y~~MGYGsrAvqLL~~y~eG~ 646 (1011)
T KOG2036|consen 614 GARIVRIAVHPEYQKMGYGSRAVQLLTDYFEGK 646 (1011)
T ss_pred CceEEEEEeccchhccCccHHHHHHHHHHHhcc
Confidence 356889999999999999999999999988765
No 111
>PF09390 DUF1999: Protein of unknown function (DUF1999); InterPro: IPR018987 This family contains a putative Fe-S binding reductase (Q72J89 from SWISSPROT) whose structure adopts an alpha and beta fold. ; PDB: 2D4O_A 2D4P_A.
Probab=89.32 E-value=4.7 Score=33.09 Aligned_cols=133 Identities=14% Similarity=0.076 Sum_probs=63.2
Q ss_pred EEEEEcCCcchHHHHHHHHHHhccCCC----Cccccccc-cccchhHHhh-cCCCceEEEEE-ECCeEEEEEEEEEeecc
Q 019558 6 VITRSYDRQIDRARVEDLERRCEVGPA----ERVFLFTD-TLGDPICRIR-NSPMYKMLVAE-LDRELVGVIQGSIKQVT 78 (339)
Q Consensus 6 i~IR~~~~~~D~~~v~~L~~~~~~~~~----~~~~~~~~-~~~~~l~~~~-~~~~~~~~VAe-~~geiVG~i~~~~~~~~ 78 (339)
|.+|+++ +.|++.+.++.....-... ..+..... .+...+..++ ..-..+.|+|+ .+|++.||+....-.
T Consensus 1 M~yR~f~-e~D~~aL~ald~a~qr~~dP~fd~lperer~gr~~tSl~Alrfy~RsgHSFvA~~e~~~~~GfvLAQaVW-- 77 (161)
T PF09390_consen 1 MRYRPFT-EPDFAALQALDLAAQRRTDPAFDGLPEREREGRLSTSLAALRFYERSGHSFVAEDEGGELQGFVLAQAVW-- 77 (161)
T ss_dssp -EEE----GGGHHHHHHC--------------------STTS---HHHHHHHHCCS--EEEE-ETTEEEEEEEEEEEE--
T ss_pred CcccccC-cccHHHHHHHhhhccccccccccccccccccccccCCHHHhhhhhccCCcEEEEccCCceeeeeehhHHh--
Confidence 5789999 9999999988555421110 00100000 0111111111 11236679999 789999999773211
Q ss_pred ccCCCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHHHHhhCCCEEee
Q 019558 79 VQKPHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKLFVNKLGYVNFR 151 (339)
Q Consensus 79 ~~~~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY~k~GF~~~~ 151 (339)
+|. ..+.++..+.+.| -+......-|++++.+-+-+.++-.+.+...+.-. .. .+.-||...+
T Consensus 78 --QGd---rptVlV~ri~~~~-~~~~~~~~GLLrAvvKSAYDa~VYEv~l~l~p~l~---~A-~~a~~~~~~~ 140 (161)
T PF09390_consen 78 --QGD---RPTVLVRRILLAP-GEPEEVYEGLLRAVVKSAYDAGVYEVHLHLDPELE---AA-ARAEGFRLGG 140 (161)
T ss_dssp ---SS---SEEEEEEEE---E-ESSHHHHHHHHHHHHHHHHHTT-SEEEE---THHH---HH-HHHTT----S
T ss_pred --cCC---CceEEEEEeecCC-CCcHHHHHHHHHHHHHhhhccceEEEEeeCCHHHH---HH-HhhcccccCC
Confidence 122 2345555555544 44567888899999999999999888887776322 22 5667777544
No 112
>TIGR02382 wecD_rffC TDP-D-fucosamine acetyltransferase. This model represents the WecD protein (Formerly RffC) for the biosynthesis of enterobacterial common antigen (ECA), an outer leaflet, outer membrane glycolipid with a trisaccharide repeat unit. WecD is a member of the GNAT family of acetytransferases (pfam00583).
Probab=89.01 E-value=1.5 Score=37.79 Aligned_cols=142 Identities=15% Similarity=0.119 Sum_probs=80.4
Q ss_pred CChHHHHHHHhhCCCEEeecCeeeecccccccccCCCceeEeecCHHHHHHHHHHhccCC-------CCC-CCChhhhhh
Q 019558 133 DNEASVKLFVNKLGYVNFRTPAILVHPVNNRMFHTPSNVQIRKLRIEEAENLYYKFMAST-------EFF-PYDIGNILR 204 (339)
Q Consensus 133 ~N~~a~~lfY~k~GF~~~~~~~~~~~p~~~~~~~~~~~~~i~~l~~~da~~l~~~~~~~~-------~~~-p~d~~~~L~ 204 (339)
+|..-..+ .+..||........+..|...... ......+++++++|++.+.+...... ..+ |.+.+..+.
T Consensus 8 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~lR~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (191)
T TIGR02382 8 SNLGLLDA-LQQLGFSLVEGEVDLSLPVNNTEN-ATSDPGARVATETDIPALRQLASAAFALSRFRAPWYAPDDSGRFYA 85 (191)
T ss_pred HHHHHHHH-HHHhhhhhhheeEEEEEEcCCCCC-CCCCCcceeCChhhHHHHHHHHHHHhhccccCCCCcCHHHHHHHHH
Confidence 44443445 789999988877666666555321 23345899999999987755543321 111 212222222
Q ss_pred ----ccCCc--ce--EEEeeeCCcccccCCCCCCCCCceEEEEEEecCc--cee--ccCCCChHHHHHHHHHhhhhcccc
Q 019558 205 ----NKLSL--GT--WVAYPRGEIVGEFGSNGQIFPKSWAMVSVWNSGE--LFK--LREGPLSGKMVRTLCQFVHNMAGT 272 (339)
Q Consensus 205 ----~~l~~--gt--~~a~~~~~~~~~~~~~~~~~~~~~a~~svw~~~~--~~~--l~~~~~~~~l~~~l~~~~~~~~~~ 272 (339)
..... .. +++...++.. .++..++.++-.. +-. +.+..++..+.+.|++++-..|.
T Consensus 86 ~~~~~~~~~~~~~~~~i~~~~~g~i-----------iG~i~l~~~~~~~~~i~~l~V~p~~rGkG~G~~ll~~~~~~a~- 153 (191)
T TIGR02382 86 QWVENAVRGTFDHQCLILRDASGDP-----------RGYVTLRELNDTDARIGLLAVFPGAQSRGIGAELMQTALNWCY- 153 (191)
T ss_pred HHHHHHhcCCCCCeEEEEEccCCeE-----------EEEEEEEecCCCceEEEEEEECHHHcCCCHHHHHHHHHHHHHH-
Confidence 22211 22 2233333333 2444444443211 111 22666777788888888888888
Q ss_pred CCCCceEEEEeccccch
Q 019558 273 KSKDCKVIVTEVGGSDA 289 (339)
Q Consensus 273 ~~~~~~~~~~~~~~~dp 289 (339)
+.||..|.++|...|+
T Consensus 154 -~~g~~~I~l~v~~~N~ 169 (191)
T TIGR02382 154 -ARGLTRLRVATQMGNT 169 (191)
T ss_pred -HcCCCEEEEEeCCCCH
Confidence 7899999999998886
No 113
>COG2401 ABC-type ATPase fused to a predicted acetyltransferase domain [General function prediction only]
Probab=88.58 E-value=0.35 Score=46.75 Aligned_cols=62 Identities=19% Similarity=0.274 Sum_probs=44.8
Q ss_pred EEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEec----cCChHHHHHHHhhCCCEEe
Q 019558 89 VGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATE----KDNEASVKLFVNKLGYVNF 150 (339)
Q Consensus 89 ~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~----~~N~~a~~lfY~k~GF~~~ 150 (339)
.+-|..+.|+|+||+-|+|..-+..+.+|..++....+...-+ ..-.+-.+-|+++.||...
T Consensus 241 aariarvvvhpdyr~dglg~~sv~~a~ewI~eRriPEmr~rkHlvetiaqmarynpffe~~gfkyl 306 (593)
T COG2401 241 AARIARVVVHPDYRADGLGQLSVIAALEWIIERRIPEMRPRKHLVETIAQMARYNPFFEKVGFKYL 306 (593)
T ss_pred hhheeEEEeccccccCccchhHHHHHHHHHHHhhChhhhhhhhHHHHHHHHHhcCchhhhhceeee
Confidence 4568899999999999999999999999999987654443210 0111112336999999863
No 114
>PLN03238 probable histone acetyltransferase MYST; Provisional
Probab=87.35 E-value=1.8 Score=39.73 Aligned_cols=31 Identities=23% Similarity=0.231 Sum_probs=26.4
Q ss_pred EEEEEeCcccccCCHHHHHHHHHHHHHHhCC
Q 019558 92 VLGLRVAPLHRRKGIGSSLVCKLEEWFTSND 122 (339)
Q Consensus 92 I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g 122 (339)
+.-+.|.|.||++|+|+.|++..-+..+..|
T Consensus 158 LaCIltLPpyQrkGyG~~LI~fSYeLSr~Eg 188 (290)
T PLN03238 158 LACILTLPPYQRKGYGKFLISFAYELSKREG 188 (290)
T ss_pred EEEEEecChhhhccHhHhHHHHHhHHhhccC
Confidence 4556899999999999999999888777665
No 115
>PF13527 Acetyltransf_9: Acetyltransferase (GNAT) domain; PDB: 3SXN_C 2I00_D 1M4D_B 1M44_A 1M4G_B 1M4I_A 2OZG_A 2HV2_F 3N7Z_A 3RYO_B ....
Probab=83.31 E-value=1.5 Score=34.48 Aligned_cols=95 Identities=18% Similarity=0.163 Sum_probs=52.2
Q ss_pred EeecCHHHHHHHHHHhccCCCCCCCChhh-----hhhccCCcceEEEeeeCCcccccCCCCCCCCCceEEEEE-Ee-cCc
Q 019558 173 IRKLRIEEAENLYYKFMASTEFFPYDIGN-----ILRNKLSLGTWVAYPRGEIVGEFGSNGQIFPKSWAMVSV-WN-SGE 245 (339)
Q Consensus 173 i~~l~~~da~~l~~~~~~~~~~~p~d~~~-----~L~~~l~~gt~~a~~~~~~~~~~~~~~~~~~~~~a~~sv-w~-~~~ 245 (339)
|++++++|.+++.+..... |+.+.+. ...+.+..+..+....++...|. .+++.. |. .+.
T Consensus 2 iR~~~~~d~~~i~~l~~~~---F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivg~----------~~~~~~~~~~~g~ 68 (127)
T PF13527_consen 2 IRPLTESDFEQIIELFNEA---FGDSESPPEIWEYFRNLYGPGRCVVAEDDGKIVGH----------VGLIPRRLSVGGK 68 (127)
T ss_dssp EEEE-GGGHHHHHHHHHHH---TTT-CHHHHHHHHHHHHHHTTEEEEEEETTEEEEE----------EEEEEEEEEETTE
T ss_pred ceECCHHHHHHHHHHHHHH---CCCCCCchhhhhhhhcccCcCcEEEEEECCEEEEE----------EEEEEEEEEECCE
Confidence 6677777776665554333 3333222 23344444555555555544332 122211 11 233
Q ss_pred ceecc--------CCCChHHHHHHHHHhhhhccccCCCCceEEEE
Q 019558 246 LFKLR--------EGPLSGKMVRTLCQFVHNMAGTKSKDCKVIVT 282 (339)
Q Consensus 246 ~~~l~--------~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 282 (339)
.+++. +..++..+++.|.+++++.++ +.|+..++.
T Consensus 69 ~~~~~~i~~v~v~p~~R~~Gl~~~L~~~~~~~~~--~~g~~~~~l 111 (127)
T PF13527_consen 69 KFKAAYIGDVAVDPEYRGRGLGRQLMRALLERAR--ERGVPFIFL 111 (127)
T ss_dssp EEEEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHH--HTT-SEEEE
T ss_pred EEEEEEEEEEEECHHHcCCCHHHHHHHHHHHHHH--hCCCCEEEE
Confidence 34443 778889999999999999999 778776654
No 116
>PLN03239 histone acetyltransferase; Provisional
Probab=82.72 E-value=3.4 Score=39.07 Aligned_cols=31 Identities=26% Similarity=0.341 Sum_probs=26.3
Q ss_pred EEEEEeCcccccCCHHHHHHHHHHHHHHhCC
Q 019558 92 VLGLRVAPLHRRKGIGSSLVCKLEEWFTSND 122 (339)
Q Consensus 92 I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g 122 (339)
+.-+.|.|.||++|+|+.|++..-+..+..|
T Consensus 216 LaCIltLPpyQrkGyG~lLI~fSYeLSr~Eg 246 (351)
T PLN03239 216 LACILTFPAHQRKGYGRFLIAFSYELSKKEE 246 (351)
T ss_pred eEEEEecChhhhcchhhhhHhhhhHhhhhcC
Confidence 4556899999999999999999888777655
No 117
>PF02474 NodA: Nodulation protein A (NodA); InterPro: IPR003484 Rhizobial nodulation (Nod) factors are signalling molecules secreted by root-nodulating rhizobia in response to flavanoids excreted by the host plant. They induce various symbiotic responses on the roots of the leguminous host plant at low concentrations, and are required for successful infection. Rhizobial Nod factors are lipo-chitooligosaccharides carrying various substituents which are important determinants of host specificity []. NodA is an N-acyl transferase which specifies the transfer of an acyl chain to the oligosaccharide backbone of Nod factor. Allelic variation of the nodA gene can contribute to the determination of host range [].; GO: 0016746 transferase activity, transferring acyl groups
Probab=82.17 E-value=3.6 Score=34.85 Aligned_cols=55 Identities=16% Similarity=0.103 Sum_probs=44.0
Q ss_pred ccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHHHHhhCC
Q 019558 87 AKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKLFVNKLG 146 (339)
Q Consensus 87 ~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY~k~G 146 (339)
.-++.++.+.|.|+.+|.||+..+ +.+...+++.|+...+.++...- +-+++|++
T Consensus 83 lLVaElGLygVRpDLEGlGi~hs~-r~m~PvLq~LgVPF~FGtVR~al----~~Hv~R~~ 137 (196)
T PF02474_consen 83 LLVAELGLYGVRPDLEGLGISHSM-RVMYPVLQELGVPFGFGTVRHAL----RNHVERLC 137 (196)
T ss_pred eeEEEEEEEEeeccccccccchhh-hhhhhHHHhcCCCeecccchHHH----HHHHHHHh
Confidence 346889999999999999999976 68888888999998887776543 33566666
No 118
>PRK10146 aminoalkylphosphonic acid N-acetyltransferase; Provisional
Probab=82.09 E-value=3.4 Score=33.13 Aligned_cols=107 Identities=8% Similarity=-0.020 Sum_probs=62.1
Q ss_pred ceeEeecCHHHHHHHHHHhcc--CCCCCCCC-hhhhhhccCC-cceEEEeeeCCcccccCCCCCCCCCceEEEEE-Ee--
Q 019558 170 NVQIRKLRIEEAENLYYKFMA--STEFFPYD-IGNILRNKLS-LGTWVAYPRGEIVGEFGSNGQIFPKSWAMVSV-WN-- 242 (339)
Q Consensus 170 ~~~i~~l~~~da~~l~~~~~~--~~~~~p~d-~~~~L~~~l~-~gt~~a~~~~~~~~~~~~~~~~~~~~~a~~sv-w~-- 242 (339)
.+.+++++.+|++.+.+.... ..++-..+ .+.+...... ...+.++..++...|+ ..+.. ++
T Consensus 3 ~~~ir~a~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~ivG~-----------~~~~~~~~~~ 71 (144)
T PRK10146 3 ACELRPATQYDTDAVYALICELKQAEFDHQAFRVGFNANLRDPNMRYHLALLDGEVVGM-----------IGLHLQFHLH 71 (144)
T ss_pred ccEEeeCcHhhHHHHHHHHHHHhcccCCHHHHHHHHHHHhcCCCceEEEEEECCEEEEE-----------EEEEeccccc
Confidence 467889999999887665432 11221111 1222222112 2355555555544333 22221 11
Q ss_pred -cC---c--ceeccCCCChHHHHHHHHHhhhhccccCCCCceEEEEeccccch
Q 019558 243 -SG---E--LFKLREGPLSGKMVRTLCQFVHNMAGTKSKDCKVIVTEVGGSDA 289 (339)
Q Consensus 243 -~~---~--~~~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~dp 289 (339)
.. . .+-+.+..++..+.+.|+.++.+.|+ +.||..+-.++...++
T Consensus 72 ~~~~~~~i~~l~v~p~~rg~GiG~~Ll~~~~~~a~--~~~~~~i~l~~~~~n~ 122 (144)
T PRK10146 72 HVNWIGEIQELVVMPQARGLNVGSKLLAWAEEEAR--QAGAEMTELSTNVKRH 122 (144)
T ss_pred ccchhheeheeEECHHHcCCCHHHHHHHHHHHHHH--HcCCcEEEEecCCCch
Confidence 00 1 12233677788899999999999999 8999999999988776
No 119
>PTZ00064 histone acetyltransferase; Provisional
Probab=81.85 E-value=3.2 Score=40.95 Aligned_cols=31 Identities=23% Similarity=0.180 Sum_probs=26.3
Q ss_pred EEEEEeCcccccCCHHHHHHHHHHHHHHhCC
Q 019558 92 VLGLRVAPLHRRKGIGSSLVCKLEEWFTSND 122 (339)
Q Consensus 92 I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g 122 (339)
+.-+.|.|.||++|+|+.|++..-+..+..|
T Consensus 387 LACILtLPpyQRKGYGklLIdfSYeLSrrEg 417 (552)
T PTZ00064 387 LACILTLPCYQRKGYGKLLVDLSYKLSLKEG 417 (552)
T ss_pred eEEEEecchhhhcchhhhhhhhhhhhhhhcC
Confidence 4556899999999999999999888777655
No 120
>PF09924 DUF2156: Uncharacterized conserved protein (DUF2156); InterPro: IPR024320 This domain of unknown function is found in uncharacterised proteins and in Lysylphosphatidylglycerol synthetase, which catalyses the transfer of a lysyl group from L-lysyl-tRNA(Lys) to membrane-bound phosphatidylglycerol [].; PDB: 2HQY_A.
Probab=79.67 E-value=24 Score=32.56 Aligned_cols=109 Identities=15% Similarity=0.079 Sum_probs=57.8
Q ss_pred EEEEEc---CCcchHHHHHHHHHHhccCCCCccccccccccchhHHhhcCCCceEEEEEE-CCeEEEEEEEEEeeccccC
Q 019558 6 VITRSY---DRQIDRARVEDLERRCEVGPAERVFLFTDTLGDPICRIRNSPMYKMLVAEL-DRELVGVIQGSIKQVTVQK 81 (339)
Q Consensus 6 i~IR~~---~~~~D~~~v~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~VAe~-~geiVG~i~~~~~~~~~~~ 81 (339)
+.+++. + +++.+++.++........... ....+...+... .......+++.+ +|+++|++.+......
T Consensus 133 ~~~~~~~~~~-~~~~~el~~i~~~W~~~~~~~---e~~~~~~~~~~~-~~~~~~~~~~~~~dgki~af~~~~~~~~~--- 204 (299)
T PF09924_consen 133 FEVVPIPELD-PELRDELLEISDEWLKEKERP---ERGFIMGALEHF-DELGLRGFVARVADGKIVAFAIGSPLGGR--- 204 (299)
T ss_dssp -EEEE------GGGHHHHHHHHHHHHHHCTHH---HHHHHHHHHHTH-HHHT-EEEEEEE-TTEEEEEEEEEEEE-T---
T ss_pred EEEEECCCCC-HHHHHHHHHHHHHHHhcCchh---HHHHHhccccch-hhcCceEEEEEECCCcEEEEEEEEEccCC---
Confidence 556666 6 788888888866642221000 000111111111 112366788888 9999999988654411
Q ss_pred CCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEE
Q 019558 82 PHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMA 129 (339)
Q Consensus 82 ~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~ 129 (339)
....+....-+|+ --+|+-..|+..+++.+++.|++++-|.
T Consensus 205 ------~~~~~~~~k~~~~-a~~G~~e~l~~~~~~~~~~~g~~~lnLg 245 (299)
T PF09924_consen 205 ------DGWSIDFEKADPD-APKGIYEFLNVEFAEHLKAEGVEYLNLG 245 (299)
T ss_dssp ------TEEEEEEEEE-TT--STTHHHHHHHHHHHHS--TT--EEE--
T ss_pred ------ccEEEEEEecCCC-CCCcHHHHHHHHHHHhhhhCCceEEEcc
Confidence 1133444444566 3469999999999999998888776654
No 121
>PRK00756 acyltransferase NodA; Provisional
Probab=79.14 E-value=7.3 Score=32.83 Aligned_cols=60 Identities=17% Similarity=0.114 Sum_probs=44.0
Q ss_pred ccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHHHHhhCCCE
Q 019558 87 AKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKLFVNKLGYV 148 (339)
Q Consensus 87 ~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY~k~GF~ 148 (339)
.-++.++.+.|.|+..|.||+..+ +.+.--+++.|+....-+|.+.-..-+.- +-|.|..
T Consensus 83 lLVaElGLygVRpDLEGlGi~~S~-r~m~PvLq~LgVPF~FGtVR~al~~Hv~R-~~r~g~~ 142 (196)
T PRK00756 83 LLVAELGLYGVRPDLEGLGIAHSI-RAMYPVLQELGVPFAFGTVRHALRNHVER-LCRNGLA 142 (196)
T ss_pred eeEEEeeeeeeccccccccchhhH-HHHHHHHHhcCCCeecccchHHHHHHHHH-HhccCcc
Confidence 356889999999999999999877 67777888899988877776654432333 2245554
No 122
>PLN00104 MYST -like histone acetyltransferase; Provisional
Probab=78.05 E-value=3.2 Score=40.66 Aligned_cols=58 Identities=19% Similarity=0.169 Sum_probs=37.9
Q ss_pred ceEEEEE-E---CCeEEEEEEEEEeeccccCCCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCC
Q 019558 55 YKMLVAE-L---DRELVGVIQGSIKQVTVQKPHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSND 122 (339)
Q Consensus 55 ~~~~VAe-~---~geiVG~i~~~~~~~~~~~~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g 122 (339)
+.++|.. . +-.+||+-+=-... ... .-+.-+.|.|.||++|+|+.|++..-+..+..|
T Consensus 278 FlFYvl~e~d~~g~h~vGyFSKEk~s-------~~~---~NLaCIltlP~yQrkGyG~~LI~~SYeLSr~eg 339 (450)
T PLN00104 278 FLFYVLCECDDRGCHMVGYFSKEKHS-------EED---YNLACILTLPPYQRKGYGKFLIAFSYELSKREG 339 (450)
T ss_pred eEEEEEEEecCCCcEEEEEecccccC-------cCC---CceEEEEecchhhhcchhheehhheehhhhccC
Confidence 5666653 2 34788987321111 001 224556899999999999999998877776655
No 123
>KOG3014 consensus Protein involved in establishing cohesion between sister chromatids during DNA replication [Replication, recombination and repair]
Probab=76.90 E-value=25 Score=31.65 Aligned_cols=32 Identities=31% Similarity=0.332 Sum_probs=26.9
Q ss_pred cEEEEEEEEeCcccccCCHHHHHHHHHHHHHH
Q 019558 88 KVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFT 119 (339)
Q Consensus 88 ~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~ 119 (339)
...-|..+.|.+..|++||++.|++.+.....
T Consensus 182 ~~~GIsRIWV~s~~Rr~gIAs~lldva~~~~~ 213 (257)
T KOG3014|consen 182 AICGISRIWVSSLRRRKGIASLLLDVARCNFV 213 (257)
T ss_pred cEeeeEEEEeehhhhhhhhHHHHHHHHHHhhh
Confidence 35668899999999999999999998866443
No 124
>cd04266 DUF619-NAGS-FABP DUF619 domain of N-acetylglutamate Synthase of the fungal arginine-biosynthetic pathway. DUF619-NAGS-FABP: This family includes the DUF619 domain of N-acetylglutamate synthase (NAGS) of the fungal arginine-biosynthetic pathway (FABP). This NAGS (also known as arginine-requiring protein 2 or ARG2) consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. NAGS catalyzes the formation of NAG from acetylcoenzyme A and L-glutamate. The DUF619 domain, yet to be characterized, is predicted to function in NAGS association in fungi.
Probab=76.21 E-value=15 Score=28.76 Aligned_cols=51 Identities=22% Similarity=0.323 Sum_probs=38.6
Q ss_pred ccEEEEEEEEeCccccc-CCHHHHHHHHHHHHHHhCCCcE-EEEEeccCChHHHHHHHh
Q 019558 87 AKVGYVLGLRVAPLHRR-KGIGSSLVCKLEEWFTSNDVDY-AYMATEKDNEASVKLFVN 143 (339)
Q Consensus 87 ~~~~~I~~l~V~P~~Rg-kGIG~~Ll~~~~~~a~~~g~~~-i~l~v~~~N~~a~~lfY~ 143 (339)
..++|+..++|.++.|| .|++..+...+.+ .... +...+.++|+. .+.|++
T Consensus 37 ~~v~yLdKFav~~~~~gl~gv~D~vf~~m~~-----~fp~~L~Wrsr~~n~~-n~Wyfe 89 (108)
T cd04266 37 EKIAYLDKFAVLPKAQGSDGIADILFNAMLD-----GFPNELIWRSRKDNPV-NKWYFE 89 (108)
T ss_pred CCceEEEEEEEccccccccchHHHHHHHHHH-----cCCCceEEEeCCCCcc-cceEEe
Confidence 35689999999999997 8999999998877 3333 66677777775 344343
No 125
>PHA00432 internal virion protein A
Probab=75.98 E-value=13 Score=30.47 Aligned_cols=29 Identities=10% Similarity=0.150 Sum_probs=24.4
Q ss_pred CcEEEEEeccCChHHHHHHHhhCCCEEeec
Q 019558 123 VDYAYMATEKDNEASVKLFVNKLGYVNFRT 152 (339)
Q Consensus 123 ~~~i~l~v~~~N~~a~~lfY~k~GF~~~~~ 152 (339)
++.+.=.|...|..++++ .+.+||+....
T Consensus 93 yp~LwNyV~~~N~~hir~-Lk~lGf~f~~e 121 (137)
T PHA00432 93 YPSLWNYVWVGNKSHIRF-LKSIGAVFHNE 121 (137)
T ss_pred hhhhheeeecCCHHHHHH-HHHcCeeeecc
Confidence 555666799999999998 99999997655
No 126
>KOG2696 consensus Histone acetyltransferase type b catalytic subunit [Chromatin structure and dynamics]
Probab=73.85 E-value=7.7 Score=36.88 Aligned_cols=45 Identities=22% Similarity=0.296 Sum_probs=34.1
Q ss_pred EEEEEEEeCcccccCCHHHHHHHHHHHHHHh-CCCcEEEEEeccCChH
Q 019558 90 GYVLGLRVAPLHRRKGIGSSLVCKLEEWFTS-NDVDYAYMATEKDNEA 136 (339)
Q Consensus 90 ~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~-~g~~~i~l~v~~~N~~ 136 (339)
.-|..+-+.|.||++|+|+.|++.+...... -.+ +..++...+++
T Consensus 218 ~RiSQmlilpPfq~~Glgs~l~E~i~r~~~~~p~v--~DiTVEdPse~ 263 (403)
T KOG2696|consen 218 PRISQMLILPPFQGKGLGSQLYEAIARDYLEEPTV--LDITVEDPSEA 263 (403)
T ss_pred hhhheeEEeccccCCchHHHHHHHHHHhhccCCce--eEEEecCchHH
Confidence 4567778999999999999999999964443 343 55666666666
No 127
>PHA01733 hypothetical protein
Probab=70.82 E-value=7.4 Score=32.36 Aligned_cols=82 Identities=22% Similarity=0.273 Sum_probs=48.7
Q ss_pred EEEEECCeEEEEEEEEEeeccccCCCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHH-hCCCcEEEEEeccCChH
Q 019558 58 LVAELDRELVGVIQGSIKQVTVQKPHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFT-SNDVDYAYMATEKDNEA 136 (339)
Q Consensus 58 ~VAe~~geiVG~i~~~~~~~~~~~~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~-~~g~~~i~l~v~~~N~~ 136 (339)
.....+|+++|...... + ....++.+..+...-=.| +-+.+++++..+.. .+.+..+.-.|...|..
T Consensus 50 ~~~~~nG~l~aI~Gv~~-d--------~~~~vG~pWlV~T~~v~k---~~~~f~re~r~~l~e~~~Yp~LwNyV~~~N~~ 117 (153)
T PHA01733 50 AFVAPDGSLAGVAGLVE-D--------MGNRVGEIWMVCTPAIEK---NPIALLRGAKWWLPKSRNYDLLWNIVDKRNLV 117 (153)
T ss_pred EEEecCCcEEEEecccc-c--------ccCCCCceeEEecHHhHh---CCHHHHHHHHHHHHHhccccHHHHhHhcccHH
Confidence 44444788988774332 1 112335555554433332 33344444444444 34555566669999999
Q ss_pred HHHHHHhhCCCEEeec
Q 019558 137 SVKLFVNKLGYVNFRT 152 (339)
Q Consensus 137 a~~lfY~k~GF~~~~~ 152 (339)
++++ .+.+||+....
T Consensus 118 hir~-Lk~lGF~f~~~ 132 (153)
T PHA01733 118 HRKL-LRKLGFKGLRY 132 (153)
T ss_pred HHHH-HHHcCceeecc
Confidence 9998 99999997544
No 128
>KOG2747 consensus Histone acetyltransferase (MYST family) [Chromatin structure and dynamics]
Probab=69.85 E-value=7 Score=37.61 Aligned_cols=31 Identities=23% Similarity=0.190 Sum_probs=24.3
Q ss_pred EEEEEeCcccccCCHHHHHHHHHHHHHHhCC
Q 019558 92 VLGLRVAPLHRRKGIGSSLVCKLEEWFTSND 122 (339)
Q Consensus 92 I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g 122 (339)
+.-+.|.|.||++|+|+.|++.--+.-+.-|
T Consensus 263 laCILtLPpyQRkGYGklLIdFSYeLSr~E~ 293 (396)
T KOG2747|consen 263 LACILTLPPYQRKGYGKLLIDFSYELSRREG 293 (396)
T ss_pred eeeeeecChhhhcccchhhhhhhhhhhcccC
Confidence 4445799999999999999998766655433
No 129
>PRK09491 rimI ribosomal-protein-alanine N-acetyltransferase; Provisional
Probab=69.07 E-value=12 Score=30.06 Aligned_cols=104 Identities=15% Similarity=0.133 Sum_probs=58.9
Q ss_pred eEeecCHHHHHHHHHHhccCCCCCCCChhhhhhccCCcceEEEeeeCCcccccCCCCCCCCCceEEEEEEec-Cccee--
Q 019558 172 QIRKLRIEEAENLYYKFMASTEFFPYDIGNILRNKLSLGTWVAYPRGEIVGEFGSNGQIFPKSWAMVSVWNS-GELFK-- 248 (339)
Q Consensus 172 ~i~~l~~~da~~l~~~~~~~~~~~p~d~~~~L~~~l~~gt~~a~~~~~~~~~~~~~~~~~~~~~a~~svw~~-~~~~~-- 248 (339)
.|++++.+|...++..... ...+|.+.+.+.......-...++..++.. .+++.+..+.. ...+.
T Consensus 3 ~iR~~~~~D~~~l~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------vG~~~~~~~~~~~~~~~i~ 70 (146)
T PRK09491 3 TISSLTPADLPAAYHIEQR-AHAFPWSEKTFASNQGERYLNLKLTVNGQM-----------AAFAITQVVLDEATLFNIA 70 (146)
T ss_pred chhcCChhhhHHHHHHHHh-cCCCCCCHHHHHHHHhcCceEEEEEECCeE-----------EEEEEEEeecCceEEEEEE
Confidence 5778888888888665422 223555555443321111111223333332 23444432211 11121
Q ss_pred ccCCCChHHHHHHHHHhhhhccccCCCCceEEEEeccccch
Q 019558 249 LREGPLSGKMVRTLCQFVHNMAGTKSKDCKVIVTEVGGSDA 289 (339)
Q Consensus 249 l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~dp 289 (339)
+.+..++..+.+.|++++.+.++ ..||.-+.+++...++
T Consensus 71 v~~~~rg~G~g~~ll~~~~~~~~--~~~~~~~~~~~~~~N~ 109 (146)
T PRK09491 71 VDPDYQRQGLGRALLEHLIDELE--KRGVATLWLEVRASNA 109 (146)
T ss_pred ECHHHccCCHHHHHHHHHHHHHH--HCCCcEEEEEEccCCH
Confidence 23667788888888889888888 7889989888876653
No 130
>TIGR03103 trio_acet_GNAT GNAT-family acetyltransferase TIGR03103. Members of this protein family belong to the GNAT family of acetyltransferases. Each is part of a conserved three-gene cassette sparsely distributed across at least twenty different species known so far, including alpha, beta, and gamma Proteobacteria, Mycobacterium, and Prosthecochloris, which is a member of the Chlorobi. The other two members of the cassette are a probable protease and an asparagine synthetase family protein.
Probab=67.15 E-value=24 Score=35.91 Aligned_cols=120 Identities=14% Similarity=0.141 Sum_probs=71.4
Q ss_pred cccCCCceeEeec-CHHHHHHHHHHhccCCCCCCCChhhhhhccCCc-c-eEEEeee-CCcccccCCCCCC---CCCceE
Q 019558 164 MFHTPSNVQIRKL-RIEEAENLYYKFMASTEFFPYDIGNILRNKLSL-G-TWVAYPR-GEIVGEFGSNGQI---FPKSWA 236 (339)
Q Consensus 164 ~~~~~~~~~i~~l-~~~da~~l~~~~~~~~~~~p~d~~~~L~~~l~~-g-t~~a~~~-~~~~~~~~~~~~~---~~~~~a 236 (339)
..+.+.++.|+++ ++.|++.+.+.... ....|.+.+.+....... . -|++... ++...|+-..... ......
T Consensus 76 ~~~~~~g~~IR~~~~~~D~~~I~~L~~~-~~~~p~~~~~~~~~~~~~~~~~~vA~~~~~g~IVG~~~~~~~~~~~~d~~~ 154 (547)
T TIGR03103 76 AARTPRGFTVRRLRGPADVDAINRLYAA-RGMVPVRVDFVLDHRHSRAITYLVAEDEASGAIIGTVMGVDHRKAFNDPEH 154 (547)
T ss_pred CcCCCCCcEEEeCCChhHHHHHHHHHHh-cCCCCCCHHHHHHHhcCCCceEEEEEECCCCeEEEEEEEEeccccccCCCC
Confidence 4456778999997 67787776555433 334566666655333222 2 3444432 4555565321100 000001
Q ss_pred EEEEEecCcceeccCCCChHHHHHHHHHhhhhccccCCCCceEEEEeccccchh
Q 019558 237 MVSVWNSGELFKLREGPLSGKMVRTLCQFVHNMAGTKSKDCKVIVTEVGGSDAL 290 (339)
Q Consensus 237 ~~svw~~~~~~~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~dp~ 290 (339)
..++|+ +-+.+..++..+-++|+.++...++ +.||..+.++|-.+++-
T Consensus 155 ~~~i~~----l~V~P~~Rg~GIG~~Ll~~l~e~a~--~~G~~~i~L~V~~~N~~ 202 (547)
T TIGR03103 155 GSSLWC----LAVDPQAAHPGVGEALVRALAEHFQ--SRGCAYMDLSVMHDNEQ 202 (547)
T ss_pred CeEEEE----EEECHHHcCCCHHHHHHHHHHHHHH--HCCCCEEEEEEcCCCHH
Confidence 123443 2233677778888899999999898 88999999999988854
No 131
>KOG2779 consensus N-myristoyl transferase [Lipid transport and metabolism]
Probab=65.66 E-value=36 Score=32.34 Aligned_cols=133 Identities=14% Similarity=0.011 Sum_probs=77.0
Q ss_pred EEEEcCCcchHHHHHHHHHHhccCCCCccccccccccchhHHhhcCCCceEEEEEE-CCeEEEEEEEEEeeccccCCCCC
Q 019558 7 ITRSYDRQIDRARVEDLERRCEVGPAERVFLFTDTLGDPICRIRNSPMYKMLVAEL-DRELVGVIQGSIKQVTVQKPHED 85 (339)
Q Consensus 7 ~IR~~~~~~D~~~v~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~VAe~-~geiVG~i~~~~~~~~~~~~~~~ 85 (339)
-+|++. ..|++++.+|.+..--...-.+.+..+.+.+.+. -..+--..+|++. +|+|-+|++.+.-+.... +++.
T Consensus 262 G~R~me-~kDvp~V~~Ll~~yl~qf~la~~f~~eev~Hwf~--p~e~VV~syVvesp~g~ITDF~SFy~lpsTv~-~~~~ 337 (421)
T KOG2779|consen 262 GLREME-EKDVPAVFRLLRNYLKQFELAPVFDEEEVEHWFL--PRENVVYSYVVESPNGKITDFCSFYSLPSTVM-GNPK 337 (421)
T ss_pred Cccccc-ccchHHHHHHHHHHHHheecccccCHHHhHhhcc--cccceEEEEEEECCCCcccceeeEEecccccc-CCCC
Confidence 479999 9999999999877521111111111111111110 0112234567776 799999998876665331 1222
Q ss_pred --CccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHHHHhhCCCEEeec
Q 019558 86 --LAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKLFVNKLGYVNFRT 152 (339)
Q Consensus 86 --~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY~k~GF~~~~~ 152 (339)
....+|+. ..|+-+-+ -..||..++-.++..|++-...-..-+|.. |..+++|-+-.-
T Consensus 338 ~ktl~aaYly-Y~v~~~t~----~~~lvnDalilak~~gfDVFNAld~meN~~----fl~~LkFg~GdG 397 (421)
T KOG2779|consen 338 YKTLQAAYLY-YNVATSTP----LLQLVNDALILAKQKGFDVFNALDLMENES----FLKDLKFGPGDG 397 (421)
T ss_pred cceeeeeeEE-EeccCCcc----HHHHHHHHHHHHHhcCCceeehhhhhhhhh----HHHhcCcCcCCC
Confidence 22345542 23333311 357888888888888987666555667776 899999986443
No 132
>TIGR02406 ectoine_EctA L-2,4-diaminobutyric acid acetyltransferase. This enzyme family is the EctA of ectoine biosynthesis. Ectoine is a compatible solute, analagous to trehalose, betaines, etc., found often in halotolerant organisms. EctA is L-2,4-diaminobutyric acid acetyltransferase, also called DABA acetyltransferase.
Probab=65.20 E-value=9.9 Score=31.51 Aligned_cols=43 Identities=7% Similarity=0.078 Sum_probs=34.5
Q ss_pred cCCCChHHHHHHHHHhhhhccccCCCCceEEEEeccccchhccCC
Q 019558 250 REGPLSGKMVRTLCQFVHNMAGTKSKDCKVIVTEVGGSDALRLHI 294 (339)
Q Consensus 250 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~dp~~~~~ 294 (339)
.+..++..+.++|+.++.+.|+ +.+|..+.++|..+++-..++
T Consensus 75 ~p~~rg~GiG~~L~~~l~~~a~--~~~~~~i~~~v~~~N~~a~~l 117 (157)
T TIGR02406 75 DPRARGKGLARRLLEALLERVA--CERVRHLETTITPDNQASRAL 117 (157)
T ss_pred ChHhccCcHHHHHHHHHHHHHH--hCCCCEEEEEEcCCCHHHHHH
Confidence 3666777788888888888887 788889999999999776554
No 133
>cd03173 DUF619-like DUF619 domain of various N-acetylglutamate Kinases and N-acetylglutamate Synthases. DUF619-like: This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. This subgroup also includes the DUF619 domain of the FABP N-acetylglutamate kinase (NAGK), the enzyme that catalyzes the second reaction of arginine
Probab=65.01 E-value=44 Score=25.69 Aligned_cols=50 Identities=6% Similarity=0.118 Sum_probs=38.5
Q ss_pred cEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHHHHh
Q 019558 88 KVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKLFVN 143 (339)
Q Consensus 88 ~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY~ 143 (339)
.++++..++|.++-++.|++..+...+.+. ...+...+.++|+. .+.|++
T Consensus 32 ~v~~LdkFav~~~~~~~gv~D~vf~~i~~d-----~~~L~Wrsr~~n~~-n~Wyf~ 81 (98)
T cd03173 32 SIPYLDKFAVSDHLWLNNVTDNIFNLIRKD-----FPSLLWRVRENDAN-LKWYFS 81 (98)
T ss_pred CCEEEEEEEEcccccccCHHHHHHHHHHhh-----CCeeEEEeCCCCCc-cceEEE
Confidence 358999999999999999999999988764 24567777777765 344333
No 134
>PLN02706 glucosamine 6-phosphate N-acetyltransferase
Probab=62.85 E-value=26 Score=28.25 Aligned_cols=39 Identities=8% Similarity=0.189 Sum_probs=33.0
Q ss_pred eccCCCChHHHHHHHHHhhhhccccCCCCceEEEEeccccc
Q 019558 248 KLREGPLSGKMVRTLCQFVHNMAGTKSKDCKVIVTEVGGSD 288 (339)
Q Consensus 248 ~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d 288 (339)
-+.+..++..+.+.|+.++.+.|+ +.||..|.+++...+
T Consensus 92 ~V~~~~rg~GiG~~ll~~~~~~a~--~~g~~~i~l~~~~~N 130 (150)
T PLN02706 92 VVDSAARGKGLGKKIIEALTEHAR--SAGCYKVILDCSEEN 130 (150)
T ss_pred EECHHHcCCCHHHHHHHHHHHHHH--HcCCCEEEEEecccc
Confidence 344778888888999999999998 889999999998665
No 135
>PF00583 Acetyltransf_1: Acetyltransferase (GNAT) family; InterPro: IPR000182 The N-acetyltransferases (NAT) (EC 2.3.1.-) are enzymes that use acetyl coenzyme A (CoA) to transfer an acetyl group to a substrate, a reaction implicated in various functions from bacterial antibiotic resistance to mammalian circadian rhythm and chromatin remodeling. The Gcn5-related N-acetyltransferases (GNAT) catalyze the transfer of the acetyl from the CoA donor to a primary amine of the acceptor. The GNAT proteins share a domain composed of four conserved sequence motifs A-D [, ]. This GNAT domain is named after yeast GCN5 (from General Control Nonrepressed) and related histone acetyltransferases (HATs) like Hat1 and PCAF. HATs acetylate lysine residues of amino terminal histone tails, resulting in transcription activation. Another category of GNAT, the aminoglycoside N-acetyltransferases, confer antibiotic resistance by catalyzing the acetylation of amino groups in aminoglycoside antibiotics []. GNAT proteins can also have anabolic and catabolic functions in both prokaryotes and eukaryotes [, , , , ]. The acetyltransferase/GNAT domain forms a structurally conserved fold of 6 to 7 beta strands (B) and 4 helices (H) in the topology B1-H1-H2-B2-B3-B4-H3-B5-H4-B6, followed by a C-terminal strand which may be from the same monomer or contributed by another [, ]. Motifs D (B2-B3), A (B4-H3) and B (B5-H4) are collectively called the HAT core [, , ], while the N-terminal motif C (B1-H1) is less conserved. Some proteins known to contain a GNAT domain: Yeast GCN5 and Hat1, which are histone acetyltransferases (EC 2.3.1.48). Human PCAF, a histone acetyltransferase. Mammalian serotonin N-acetyltransferase (SNAT) or arylalkylamine NAT (AANAT), which acetylates serotonin into a circadian neurohormone that may participate in light-dark rhythms, and human mood and behavior. Mammalian glucosamine 6-phosphate N-acetyltransferase (GNA1) (EC 2.3.1.4). Escherichia coli rimI and rimJ, which acetylate the N-terminal alanine of ribosomal proteins S18 and S5, respectively (EC 2.3.1.128). Mycobacterium tuberculosis aminoglycoside 2'-N-acetyltransferase (aac), which acetylates the 2' hydroxyl or amino group of a broad spectrum of aminoglycoside antibiotics. Bacillus subtilis bltD and paiA, which acetylate spermine and spermidine. This entry represents the entire GNAT domain.; GO: 0008080 N-acetyltransferase activity, 0008152 metabolic process; PDB: 3T9Y_A 2R7H_B 2OZH_A 1Y9W_B 1VKC_B 2OH1_C 3R9E_B 3R9G_B 3R9F_A 3R96_A ....
Probab=61.56 E-value=7.4 Score=27.70 Aligned_cols=38 Identities=16% Similarity=0.062 Sum_probs=34.6
Q ss_pred CCCChHHHHHHHHHhhhhccccCCCCceEEEEeccccchh
Q 019558 251 EGPLSGKMVRTLCQFVHNMAGTKSKDCKVIVTEVGGSDAL 290 (339)
Q Consensus 251 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~dp~ 290 (339)
+..++..+.+.|+.++.+.|+ +.|+..+.+.+...++.
T Consensus 35 ~~~r~~Gig~~L~~~~~~~~~--~~g~~~i~~~~~~~n~~ 72 (83)
T PF00583_consen 35 PEYRGQGIGSKLLQAAEEWAR--KRGIKRIYLDVSPDNPA 72 (83)
T ss_dssp GGGTTSSHHHHHHHHHHHHHH--HTTESEEEEEEETTGHH
T ss_pred HHHhhCCCchhhhhhhhhhHH--hcCccEEEEEEeCCCHH
Confidence 778899999999999999999 88999999999988864
No 136
>PF04339 DUF482: Protein of unknown function, DUF482; InterPro: IPR007434 This family contains several proteins of uncharacterised function.
Probab=61.27 E-value=1.4e+02 Score=28.83 Aligned_cols=126 Identities=13% Similarity=0.006 Sum_probs=68.6
Q ss_pred eEEEEEcCC----cchHHHHHHHHHHhccCCCCccccccccccchhHHhhc-CC-CceEEEEEECCeEEEEEEEEEeecc
Q 019558 5 EVITRSYDR----QIDRARVEDLERRCEVGPAERVFLFTDTLGDPICRIRN-SP-MYKMLVAELDRELVGVIQGSIKQVT 78 (339)
Q Consensus 5 ~i~IR~~~~----~~D~~~v~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~-~~~~~VAe~~geiVG~i~~~~~~~~ 78 (339)
.+.|+.++. +++.+.+..+.........+.+.+.. +.+..+.. .+ ...+++|+.+|++||+.........
T Consensus 199 Gi~~~~l~G~~i~~~~~~~f~~~Y~~Ty~k~~~~~yLt~----~FF~~l~~~m~~~~~l~~A~~~g~~Va~aL~l~~~~~ 274 (370)
T PF04339_consen 199 GIRIRTLTGDEITDEDWDRFYRLYQNTYAKRWGRPYLTR----EFFEQLAETMPEQVVLVVARRDGQPVAFALCLRGDDT 274 (370)
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHHHHHHhhCCChhhcH----HHHHHHHHhCcCCEEEEEEEECCeEEEEEEEEEeCCE
Confidence 456666541 44556666666554332222222111 11233322 12 2456778889999999987766543
Q ss_pred ccCCCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHHHHhhCCCEEeecC
Q 019558 79 VQKPHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKLFVNKLGYVNFRTP 153 (339)
Q Consensus 79 ~~~~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY~k~GF~~~~~~ 153 (339)
.+. -|.+ ...++.+.- -....-..+++|.++|++.+...+. ...++ ..||+++.+.
T Consensus 275 LyG--------RYwG---~~~~~~~LH-Fe~cYYq~Ie~aI~~Gl~~f~~Gaq----GEHK~---~RGf~P~~t~ 330 (370)
T PF04339_consen 275 LYG--------RYWG---CDEEIPFLH-FELCYYQGIEYAIEHGLRRFEPGAQ----GEHKI---ARGFEPVPTY 330 (370)
T ss_pred EEE--------eeec---ccccccCcc-hHHHHHHHHHHHHHcCCCEEECCcc----hhHHH---HcCCccccce
Confidence 311 1111 123333333 2233556799999999987655433 23455 8999987664
No 137
>COG5092 NMT1 N-myristoyl transferase [Lipid metabolism]
Probab=60.95 E-value=57 Score=30.52 Aligned_cols=64 Identities=17% Similarity=0.115 Sum_probs=48.1
Q ss_pred eEEEEEEC--CeEEEEEEEEEeeccccCCCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCC
Q 019558 56 KMLVAELD--RELVGVIQGSIKQVTVQKPHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSND 122 (339)
Q Consensus 56 ~~~VAe~~--geiVG~i~~~~~~~~~~~~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g 122 (339)
..++.... .++||+|++....... .....++..+..|+|+.+.|++.+.-.|++++..++.-.|
T Consensus 133 whigvRvk~t~klVaFIsa~p~~v~v---RgK~~~~~evNFLCihk~lRsKRltPvLIkEiTRR~n~~~ 198 (451)
T COG5092 133 WHIGVRVKGTQKLVAFISAKPHLVSV---RGKRSSVLEVNFLCIHKELRSKRLTPVLIKEITRRANVDG 198 (451)
T ss_pred eEEEEEEcccceeEEEEecceeEEEE---cccccccceEEEEEEehhhhhCccchHHHHHHHHhhhhhh
Confidence 45555554 4899999886655443 1223346888999999999999999999999998886554
No 138
>KOG3216 consensus Diamine acetyltransferase [Amino acid transport and metabolism]
Probab=60.24 E-value=8.4 Score=32.10 Aligned_cols=102 Identities=20% Similarity=0.196 Sum_probs=63.4
Q ss_pred ceeEeecCHHHHHHHHHHhccCCCC-----CC-CChhh-----hhhccCCcceEEEeee-CCcccccCCCCCCCCCceEE
Q 019558 170 NVQIRKLRIEEAENLYYKFMASTEF-----FP-YDIGN-----ILRNKLSLGTWVAYPR-GEIVGEFGSNGQIFPKSWAM 237 (339)
Q Consensus 170 ~~~i~~l~~~da~~l~~~~~~~~~~-----~p-~d~~~-----~L~~~l~~gt~~a~~~-~~~~~~~~~~~~~~~~~~a~ 237 (339)
.++|+..++.|.+.+++.--+-.+| .+ ...+. ++.+.....+-++++. +....|+..+ |=-
T Consensus 3 ~~~IR~at~~D~~~i~rLikela~Fek~~~~v~~te~~l~~~~F~d~~~~~~~v~~ie~~~~~~aGf~~y-------f~~ 75 (163)
T KOG3216|consen 3 NIRIRLATPKDCEDILRLIKELAEFEKLEDQVEATEENLARDGFIDPPFKHWLVAAIETSGEVVAGFALY-------FNN 75 (163)
T ss_pred ceEEEecCcccHHHHHHHHHHHHHHHHhccchhhchhhhhhhhccCCCccEEEEEEEecCCCceeEEeee-------ecc
Confidence 4678888888877665543321111 11 11222 3334444455566665 4445566533 334
Q ss_pred EEEEecCcceecc-----CCCChHHHHHHHHHhhhhccccCCCCceEE
Q 019558 238 VSVWNSGELFKLR-----EGPLSGKMVRTLCQFVHNMAGTKSKDCKVI 280 (339)
Q Consensus 238 ~svw~~~~~~~l~-----~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 280 (339)
.|=|..+..+-|+ +..|+..+-+.|++++-..|. +.||..|
T Consensus 76 ystW~~k~~iYleDlyV~e~yR~kG~Gs~Ll~~va~~A~--~~G~~rv 121 (163)
T KOG3216|consen 76 YSTWLGKQGIYLEDLYVREQYRGKGIGSKLLKFVAEEAD--KLGTPRV 121 (163)
T ss_pred cccccccceEEEEeeEecchhcccChHHHHHHHHHHHHH--HcCCCcE
Confidence 5678887777777 888888888999999999999 8886654
No 139
>COG5027 SAS2 Histone acetyltransferase (MYST family) [Chromatin structure and dynamics]
Probab=60.01 E-value=5.9 Score=37.32 Aligned_cols=52 Identities=19% Similarity=0.159 Sum_probs=31.8
Q ss_pred CceEEEEEECC----eEEEEEEEEEeeccccCCCCCCccEEEEEEEEeCcccccCCHHHHHHHHHH
Q 019558 54 MYKMLVAELDR----ELVGVIQGSIKQVTVQKPHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLE 115 (339)
Q Consensus 54 ~~~~~VAe~~g----eiVG~i~~~~~~~~~~~~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~ 115 (339)
++.++|....| ++||+-+=.... ... .-+.-+-+.|.||++|+|+.|++.--
T Consensus 233 pflFYvl~~~~~~~~h~vGyFSKEK~S-------~~~---yNLaCILtLP~yQRrGYG~lLIdFSY 288 (395)
T COG5027 233 PFLFYVLTERGDTGCHLVGYFSKEKES-------EQD---YNLACILTLPPYQRRGYGKLLIDFSY 288 (395)
T ss_pred ceEEEEEEEcCCcceeeeeeechhhcc-------ccc---CceEEEEecChhHhcccceEeeeeee
Confidence 36677765432 477876221111 111 22444579999999999999987643
No 140
>PRK10140 putative acetyltransferase YhhY; Provisional
Probab=59.13 E-value=29 Score=28.15 Aligned_cols=42 Identities=12% Similarity=-0.045 Sum_probs=28.8
Q ss_pred eeccCCCChHHHHHHHHHhhhhccccCC-CCceEEEEeccccchh
Q 019558 247 FKLREGPLSGKMVRTLCQFVHNMAGTKS-KDCKVIVTEVGGSDAL 290 (339)
Q Consensus 247 ~~l~~~~~~~~l~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~dp~ 290 (339)
+-+.+..++..+.+.|+.++.+.|. + .|+..+.+.|...|+-
T Consensus 84 ~~v~p~~rg~Gig~~ll~~l~~~~~--~~~~~~~i~l~v~~~N~~ 126 (162)
T PRK10140 84 ICVDSRWKNRGVASALMREMIEMCD--NWLRVDRIELTVFVDNAP 126 (162)
T ss_pred EEECHHHcCCCHHHHHHHHHHHHHH--hhCCccEEEEEEEcCCHH
Confidence 3444556666777777777777777 5 4677777788776644
No 141
>PF11039 DUF2824: Protein of unknown function (DUF2824); InterPro: IPR022568 This family of proteins has no known function. Members of the family are found in P22-like viruses and bacteria. Some of the phage members have been annotated as head assembly proteins, but this has not been confirmed.
Probab=59.07 E-value=97 Score=25.21 Aligned_cols=111 Identities=14% Similarity=0.054 Sum_probs=67.7
Q ss_pred CCCceEEEEEECCeEEEEEEEEEeeccccCCCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhC-CCcEEEEEe
Q 019558 52 SPMYKMLVAELDRELVGVIQGSIKQVTVQKPHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSN-DVDYAYMAT 130 (339)
Q Consensus 52 ~~~~~~~VAe~~geiVG~i~~~~~~~~~~~~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~-g~~~i~l~v 130 (339)
.|+...+...+++.++|+.....-.. ...-..-.-+|++|| ++...-....+|+-++ .+.-+...+
T Consensus 35 K~~~~Y~gVyeg~~l~Gi~~v~~i~~-----------~~vecHa~y~P~fRG--~a~~~~~~F~kwlL~Ns~f~~vit~v 101 (151)
T PF11039_consen 35 KPDQLYLGVYEGGQLGGIVYVEEIQP-----------SVVECHAMYDPGFRG--YALEIGRLFCKWLLENSPFQNVITFV 101 (151)
T ss_pred cCccEEEEEEeceEEEEEEEEEEEee-----------eeEEEEeeeccccch--hHHHHHHHHHHHHhcCCceeEEEEec
Confidence 45566777788899999885532110 022223346999998 7777777777777765 443333334
Q ss_pred ccCChHHHHHHHhhCCCEEeecCeeeecccccccccCCCceeEeecCHHHHHHH
Q 019558 131 EKDNEASVKLFVNKLGYVNFRTPAILVHPVNNRMFHTPSNVQIRKLRIEEAENL 184 (339)
Q Consensus 131 ~~~N~~a~~lfY~k~GF~~~~~~~~~~~p~~~~~~~~~~~~~i~~l~~~da~~l 184 (339)
.....-++-. -+=+|.+.+++..-+.. . -.++++.+++.++.+.+
T Consensus 102 p~kt~~Grvi-c~llg~~RVG~id~~~~---g-----~~~vTlYq~tReel~e~ 146 (151)
T PF11039_consen 102 PDKTRYGRVI-CRLLGARRVGHIDDYFK---G-----VDGVTLYQLTREELEEF 146 (151)
T ss_pred ccccccchhH-hhhhCCceeeeHHHHhc---C-----CCceEEEEccHHHHHHH
Confidence 4444444443 66788888776532211 1 22788899998887766
No 142
>PRK07922 N-acetylglutamate synthase; Validated
Probab=57.27 E-value=24 Score=29.62 Aligned_cols=105 Identities=6% Similarity=0.015 Sum_probs=57.5
Q ss_pred CceeEeecCHHHHHHHHHHhcc---CCCCCCCChhhhhhccCCcceEEEee-eCCcccccCCCCCCCCCceEEEEEEecC
Q 019558 169 SNVQIRKLRIEEAENLYYKFMA---STEFFPYDIGNILRNKLSLGTWVAYP-RGEIVGEFGSNGQIFPKSWAMVSVWNSG 244 (339)
Q Consensus 169 ~~~~i~~l~~~da~~l~~~~~~---~~~~~p~d~~~~L~~~l~~gt~~a~~-~~~~~~~~~~~~~~~~~~~a~~svw~~~ 244 (339)
..+.+++.+++|+..+...... .....+.....++.+ ...+++.. .++...|+..... .+...+.+.
T Consensus 4 ~~i~iR~a~~~D~~~i~~L~~~~~~~~~~~~~~~~~~~~~---~~~~~va~~~~~~iiG~~~~~~-~~~~~~~i~----- 74 (169)
T PRK07922 4 GAITVRRARTSDVPAIKRLVDPYAQGRILLEKNLVTLYEA---VQEFWVAEHLDGEVVGCGALHV-MWEDLAEIR----- 74 (169)
T ss_pred CCceeecCCHhhHHHHHHHHHHHhhcCccccchHHHHHhh---cCcEEEEEecCCcEEEEEEEee-cCCCceEEE-----
Confidence 3478899999988876554322 112222223333322 23344444 4444444321100 001111111
Q ss_pred cceeccCCCChHHHHHHHHHhhhhccccCCCCceEEEEecc
Q 019558 245 ELFKLREGPLSGKMVRTLCQFVHNMAGTKSKDCKVIVTEVG 285 (339)
Q Consensus 245 ~~~~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 285 (339)
.+-+.+..++..+-++|+.++.+.|+ +.||..+.+.+.
T Consensus 75 -~l~V~p~~rgkGiG~~Ll~~~~~~a~--~~g~~~l~~~~~ 112 (169)
T PRK07922 75 -TVAVDPAARGRGVGHAIVERLLDVAR--ELGLSRVFVLTF 112 (169)
T ss_pred -EEEECHHHhCCCHHHHHHHHHHHHHH--HcCCCEEEEEec
Confidence 13344777778888999999999999 899998876553
No 143
>PLN02825 amino-acid N-acetyltransferase
Probab=56.67 E-value=32 Score=34.69 Aligned_cols=97 Identities=13% Similarity=0.087 Sum_probs=59.4
Q ss_pred eEeecCHHHHHHHHHHh---ccCCCCCCCChhhhhhccCCcceEEEeeeCCcccccCCCCCCCCCceEEEEEEecCcc--
Q 019558 172 QIRKLRIEEAENLYYKF---MASTEFFPYDIGNILRNKLSLGTWVAYPRGEIVGEFGSNGQIFPKSWAMVSVWNSGEL-- 246 (339)
Q Consensus 172 ~i~~l~~~da~~l~~~~---~~~~~~~p~d~~~~L~~~l~~gt~~a~~~~~~~~~~~~~~~~~~~~~a~~svw~~~~~-- 246 (339)
.||+.+++|...+.... .......+..++.+... ...|++++.++...|+ +.+.-+.....
T Consensus 369 ~IR~At~eDi~~I~~Li~~lee~g~lv~rs~e~le~e---i~~f~V~e~Dg~IVG~-----------aal~~~~~~~~aE 434 (515)
T PLN02825 369 GTRMARVEDLAGIRQIIRPLEESGILVRRTDEELLRA---LDSFVVVEREGSIIAC-----------AALFPFFEEKCGE 434 (515)
T ss_pred hheeCCHHHHHHHHHHHHHHHHcCCCcCCCHHHHHhc---CCcEEEEEECCEEEEE-----------EEEEeecCCCcEE
Confidence 57788888876654443 33323334445555443 2457777777755443 33332222111
Q ss_pred ---eeccCCCChHHHHHHHHHhhhhccccCCCCceEEEEec
Q 019558 247 ---FKLREGPLSGKMVRTLCQFVHNMAGTKSKDCKVIVTEV 284 (339)
Q Consensus 247 ---~~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 284 (339)
+-+.+..++..+-+.|+.++-+.|+ +.||..+++++
T Consensus 435 I~~laV~P~yRGkGiG~~LL~~le~~Ar--~~G~~~L~Llt 473 (515)
T PLN02825 435 VAAIAVSPECRGQGQGDKLLDYIEKKAA--SLGLEKLFLLT 473 (515)
T ss_pred EEEEEECHHHcCCCHHHHHHHHHHHHHH--HCCCCEEEEEe
Confidence 2223777778888888888888999 89999999876
No 144
>PF04339 DUF482: Protein of unknown function, DUF482; InterPro: IPR007434 This family contains several proteins of uncharacterised function.
Probab=55.78 E-value=1.2e+02 Score=29.16 Aligned_cols=93 Identities=16% Similarity=0.173 Sum_probs=62.3
Q ss_pred eEEEEEECCeEEEEEEEEEeeccccC--------------CCC---------CCcc-EEEEEEEEeCcccccCCHHHHHH
Q 019558 56 KMLVAELDRELVGVIQGSIKQVTVQK--------------PHE---------DLAK-VGYVLGLRVAPLHRRKGIGSSLV 111 (339)
Q Consensus 56 ~~~VAe~~geiVG~i~~~~~~~~~~~--------------~~~---------~~~~-~~~I~~l~V~P~~RgkGIG~~Ll 111 (339)
..+++.++|++||.+-+.++....+. |.. +..+ .+ ..+.++|......+...|+
T Consensus 45 ~hl~~~~~~~lvaa~P~YlK~hS~GEyvFD~~Wa~a~~r~g~~YYPKlv~avPfTPv~G--~R~l~~~~~~~~~~~~~L~ 122 (370)
T PF04339_consen 45 RHLTLRDGGRLVAAAPLYLKSHSYGEYVFDWAWADAYQRAGLRYYPKLVGAVPFTPVTG--PRLLIAPGADRAALRAALL 122 (370)
T ss_pred eEEEEEECCEEEEEeeeeeecccCcceehhHHHHHHHHHhccccCcceEeeeCCCCCcc--cceeECCCCCHHHHHHHHH
Confidence 34778888999999999887644310 000 0111 12 2466788888899999999
Q ss_pred HHHHHHHHhCCCcEEEEEeccCChHHHHHHHhhCCCEEeecC
Q 019558 112 CKLEEWFTSNDVDYAYMATEKDNEASVKLFVNKLGYVNFRTP 153 (339)
Q Consensus 112 ~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY~k~GF~~~~~~ 153 (339)
+.+.+.+++.|+..+-+. -.++.-... .+..||......
T Consensus 123 ~~~~~~a~~~~~Ss~h~l--F~~~~~~~~-l~~~G~~~r~~~ 161 (370)
T PF04339_consen 123 QALEQLAEENGLSSWHIL--FPDEEDAAA-LEEAGFLSRQGV 161 (370)
T ss_pred HHHHHHHHHcCCCcceee--cCCHHHHHH-HHhCCCceecCC
Confidence 999999999988655432 223333455 678999875444
No 145
>PRK12308 bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional
Probab=55.15 E-value=27 Score=36.07 Aligned_cols=102 Identities=17% Similarity=0.235 Sum_probs=63.5
Q ss_pred CCCceeEeecCHHHHHHHHHHh---ccCCCCCCCChhhhhhccCCcceEEEeeeCCcccccCCCCCCCCCceEEEEEEec
Q 019558 167 TPSNVQIRKLRIEEAENLYYKF---MASTEFFPYDIGNILRNKLSLGTWVAYPRGEIVGEFGSNGQIFPKSWAMVSVWNS 243 (339)
Q Consensus 167 ~~~~~~i~~l~~~da~~l~~~~---~~~~~~~p~d~~~~L~~~l~~gt~~a~~~~~~~~~~~~~~~~~~~~~a~~svw~~ 243 (339)
.+.++.|++.+++|...+.+.. ......+|.+.+.+..+ .++++++..++...|+ +.+..++.
T Consensus 460 ~~~gm~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~~~l~~~---~~~~~Va~~~g~IVG~-----------~~l~~~~~ 525 (614)
T PRK12308 460 DTSGVKVRPARLTDIDAIEGMVAYWAGLGENLPRSRNELVRD---IGSFAVAEHHGEVTGC-----------ASLYIYDS 525 (614)
T ss_pred CCCCCEEEECCHHHHHHHHHHHHHHHhhhcccccCHHHHhcc---cCcEEEEEECCEEEEE-----------EEEEEcCC
Confidence 3778899999999887764432 22334466666555432 2456666655554443 33332222
Q ss_pred Cc--c--eeccCCCChHHHHHHHHHhhhhccccCCCCceEEEEec
Q 019558 244 GE--L--FKLREGPLSGKMVRTLCQFVHNMAGTKSKDCKVIVTEV 284 (339)
Q Consensus 244 ~~--~--~~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 284 (339)
+. + +-+.+..++..+-+.|+.++...|+ +.||..+.+++
T Consensus 526 ~~~~I~~i~V~P~~rGkGIGk~Ll~~l~~~ak--~~g~~~i~l~~ 568 (614)
T PRK12308 526 GLAEIRSLGVEAGWQVQGQGSALVQYLVEKAR--QMAIKKVFVLT 568 (614)
T ss_pred CeEEEEEEEECHHHcCCCHHHHHHHHHHHHHH--HCCCCEEEEee
Confidence 11 1 1233777788888888888888888 88988887765
No 146
>PRK10809 ribosomal-protein-S5-alanine N-acetyltransferase; Provisional
Probab=54.60 E-value=35 Score=28.96 Aligned_cols=41 Identities=7% Similarity=-0.018 Sum_probs=29.2
Q ss_pred eeccCCCChHHHHHHHHHhhhhccccCC-CCceEEEEeccccch
Q 019558 247 FKLREGPLSGKMVRTLCQFVHNMAGTKS-KDCKVIVTEVGGSDA 289 (339)
Q Consensus 247 ~~l~~~~~~~~l~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~dp 289 (339)
|.|.+...+..+.+.+++.+.+-|. + .|+..|.++|...|-
T Consensus 109 ~~i~~~~~G~G~~~ea~~~ll~~~~--~~l~l~~i~~~v~~~N~ 150 (194)
T PRK10809 109 YSLGQKWQGQGLMFEALQAAIRYMQ--RQQHMHRIMANYMPHNK 150 (194)
T ss_pred EEECHHHcCCCHHHHHHHHHHHHHH--hcCCceEEEEEeeCCCH
Confidence 4455555666666777777777765 4 479999999998884
No 147
>PRK01346 hypothetical protein; Provisional
Probab=53.38 E-value=43 Score=32.39 Aligned_cols=33 Identities=6% Similarity=-0.067 Sum_probs=28.5
Q ss_pred CCCChHHHHHHHHHhhhhccccCCCCceEEEEecc
Q 019558 251 EGPLSGKMVRTLCQFVHNMAGTKSKDCKVIVTEVG 285 (339)
Q Consensus 251 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 285 (339)
+..++..+.++|++++...++ +.|+..+...+.
T Consensus 89 P~~RgrGig~~Ll~~~l~~a~--~~g~~~~~L~~~ 121 (411)
T PRK01346 89 PTHRRRGLLTALMREQLRRIR--ERGEPVAALTAS 121 (411)
T ss_pred hhhcCCCHHHHHHHHHHHHHH--HCCCcEEEEECC
Confidence 788889999999999999999 889888877654
No 148
>PRK02983 lysS lysyl-tRNA synthetase; Provisional
Probab=52.92 E-value=1.6e+02 Score=32.74 Aligned_cols=65 Identities=14% Similarity=0.001 Sum_probs=49.1
Q ss_pred eEEEEEE-CCeEEEEEEEEEeeccccCCCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEec
Q 019558 56 KMLVAEL-DRELVGVIQGSIKQVTVQKPHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATE 131 (339)
Q Consensus 56 ~~~VAe~-~geiVG~i~~~~~~~~~~~~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~ 131 (339)
.++.+.+ +|+|+|++.+..... ....+..++-+|+- -.|+--.|+-.+++++++.|++++.|...
T Consensus 421 ~i~~a~d~~G~i~af~s~~p~~~----------~g~slDLMRr~pda-pnGvmE~L~~~l~~~~k~~G~~~~sLg~A 486 (1094)
T PRK02983 421 LLVEAHDADGQVVALLSFVPWGR----------RGLSLDLMRRSPDA-PNGVIELMVAELALEAESLGITRISLNFA 486 (1094)
T ss_pred EEEEEECCCCeEEEEEEEeeeCC----------CCEEEEecccCCCC-CCCHHHHHHHHHHHHHHHcCCCEEEechh
Confidence 3344544 589999998866331 11566667777876 57999999999999999999999988753
No 149
>COG2935 Putative arginyl-tRNA:protein arginylyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=51.01 E-value=59 Score=29.36 Aligned_cols=63 Identities=13% Similarity=0.123 Sum_probs=46.7
Q ss_pred CCeEEEEEEEEEeeccccCCCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChH
Q 019558 63 DRELVGVIQGSIKQVTVQKPHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEA 136 (339)
Q Consensus 63 ~geiVG~i~~~~~~~~~~~~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~ 136 (339)
.|++|+++..-+-+... ...| ..-+|++...++|+-.+-.-+.++++.|..+++|.-...+-.
T Consensus 159 ~G~LvAVavtDvL~dGl--------SsVY---~FydPd~s~~SLGt~~iL~~I~~aq~~~l~yvYLGYwI~~c~ 221 (253)
T COG2935 159 EGKLVAVAVTDVLPDGL--------SSVY---TFYDPDMSKRSLGTLSILDQIAIAQRLGLPYVYLGYWIKGCP 221 (253)
T ss_pred CCcEEEEEeeecccCcc--------eeEE---EEeCCChhhhcchHHHHHHHHHHHHHhCCCeEEEEEEECCcc
Confidence 68999988664433111 1111 246999999999999888889999999999999996655544
No 150
>KOG3139 consensus N-acetyltransferase [General function prediction only]
Probab=49.88 E-value=28 Score=29.31 Aligned_cols=36 Identities=11% Similarity=0.057 Sum_probs=32.4
Q ss_pred CCCChHHHHHHHHHhhhhccccCCCCceEEEEeccccc
Q 019558 251 EGPLSGKMVRTLCQFVHNMAGTKSKDCKVIVTEVGGSD 288 (339)
Q Consensus 251 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d 288 (339)
+..|+.++.++|.+.|--.++ +.||.-|+.|...++
T Consensus 94 ~e~Rg~GIg~aLvr~aId~m~--~~g~~eVvLeTe~~n 129 (165)
T KOG3139|consen 94 SEYRGQGIGKALVRKAIDAMR--SRGYSEVVLETEVTN 129 (165)
T ss_pred hhhccccHHHHHHHHHHHHHH--HCCCcEEEEeccccc
Confidence 677888899999999999999 999999999998766
No 151
>PHA00673 acetyltransferase domain containing protein
Probab=49.48 E-value=74 Score=26.60 Aligned_cols=54 Identities=11% Similarity=0.013 Sum_probs=41.0
Q ss_pred ceeccCCCChHHHHHHHHHhhhhccccCCCCceEEEEeccccchhccCCCcCCCCCCCc
Q 019558 246 LFKLREGPLSGKMVRTLCQFVHNMAGTKSKDCKVIVTEVGGSDALRLHIPHWKLLSCPE 304 (339)
Q Consensus 246 ~~~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~dp~~~~~p~~~~~~~~~ 304 (339)
...+.+..++..+-++|..+|...|+ +.||..+- |+++ |-++-|-...++.|-|
T Consensus 90 ~l~V~~~~RGqGIG~~Ll~~A~~~Ar--~~Gc~~ly--is~~-p~~~tv~fy~~~g~~~ 143 (154)
T PHA00673 90 SIFVAAAHRPGGAGMALLRATEALAR--DLGATGLY--VSGP-TEGRLVQLLPAAGYRE 143 (154)
T ss_pred EEEEChhccCCCHHHHHHHHHHHHHH--HCCCCEEE--EecC-CCccchHHHHhCCchh
Confidence 34455899999999999999999999 99998764 4543 6666666666666644
No 152
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=48.51 E-value=57 Score=30.54 Aligned_cols=103 Identities=7% Similarity=-0.047 Sum_probs=58.7
Q ss_pred ceeEeecCHHHHHHHHHHhccCCCC-------CCCChhhhhhccCCcceEEEeeeCCcccccCCCCCCCCCceEEEEEEe
Q 019558 170 NVQIRKLRIEEAENLYYKFMASTEF-------FPYDIGNILRNKLSLGTWVAYPRGEIVGEFGSNGQIFPKSWAMVSVWN 242 (339)
Q Consensus 170 ~~~i~~l~~~da~~l~~~~~~~~~~-------~p~d~~~~L~~~l~~gt~~a~~~~~~~~~~~~~~~~~~~~~a~~svw~ 242 (339)
.+.|++++++|...+.+......-| .+.++...+.+ ...|++...+. +......+++++. .
T Consensus 186 ~~~Ir~a~~~Dl~ri~~L~~~tnqfn~~~~~~s~~~i~~~l~~---~~~~~~~~~d~-------~gd~givG~~~~~--~ 253 (320)
T TIGR01686 186 SLNISKNDEQNVQRVEELLGRTNQFNATYTRLNQEDVAQHMQK---EEIVTVSMSDR-------FGDSGIIGIFVFE--K 253 (320)
T ss_pred EEEEEECChhhhHHHHHHHHhHHhhhccCccCCHHHHHHHhcC---CCEEEEEEEec-------CCCCceEEEEEEE--e
Confidence 3578888888887766655432111 11223333322 13454443221 0001123555543 3
Q ss_pred cCcceecc-----CCCChHHHHHHHHHhhhhccccCCCCceEEEEeccc
Q 019558 243 SGELFKLR-----EGPLSGKMVRTLCQFVHNMAGTKSKDCKVIVTEVGG 286 (339)
Q Consensus 243 ~~~~~~l~-----~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 286 (339)
..+.+.|. ...++..+-++|+.++-+.|+ +.||..+.+||-.
T Consensus 254 ~~~~~~I~~l~vs~r~~grGig~~Ll~~l~~~a~--~~G~~~i~l~v~~ 300 (320)
T TIGR01686 254 KEGNLFIDDLCMSCRALGRGVETRMLRWLFEQAL--DLGNHNARLYYRR 300 (320)
T ss_pred cCCcEEEEEEEEcHhHhcCcHHHHHHHHHHHHHH--HcCCCeEEEEEee
Confidence 33333333 666777888899999999998 8999999999864
No 153
>PTZ00330 acetyltransferase; Provisional
Probab=46.91 E-value=56 Score=25.92 Aligned_cols=34 Identities=15% Similarity=0.206 Sum_probs=25.4
Q ss_pred ccCCCChHHHHHHHHHhhhhccccCCCCceEEEEec
Q 019558 249 LREGPLSGKMVRTLCQFVHNMAGTKSKDCKVIVTEV 284 (339)
Q Consensus 249 l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 284 (339)
+.+..++..+.+.|++++.+.|+ +.||..+..++
T Consensus 90 V~~~~rg~Gig~~l~~~~~~~a~--~~~~~~l~l~~ 123 (147)
T PTZ00330 90 VDPSYRGQGLGRALISDLCEIAR--SSGCYKVILDC 123 (147)
T ss_pred ECHHHcCCCHHHHHHHHHHHHHH--HCCCCEEEEec
Confidence 34666677788888888888888 77877666654
No 154
>PF13673 Acetyltransf_10: Acetyltransferase (GNAT) domain; PDB: 2FIW_A 1BOB_A 3FNC_B 3EXN_A.
Probab=46.41 E-value=36 Score=25.79 Aligned_cols=30 Identities=13% Similarity=0.052 Sum_probs=26.5
Q ss_pred CCCChHHHHHHHHHhhhhccccCCCCceEEEEe
Q 019558 251 EGPLSGKMVRTLCQFVHNMAGTKSKDCKVIVTE 283 (339)
Q Consensus 251 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 283 (339)
+..++..+.++|+.++.+.++ + |+.++.++
T Consensus 74 p~~r~~Gig~~Ll~~~~~~~~--~-~~~~l~~~ 103 (117)
T PF13673_consen 74 PEYRGRGIGRALLDAAEKEAK--D-GIRRLTVE 103 (117)
T ss_dssp GGGTTSSHHHHHHHHHHHHHT--T-TCEEEEEE
T ss_pred hhhcCCcHHHHHHHHHHHHHH--c-CCcEEEEE
Confidence 777888899999999999998 6 99888888
No 155
>COG5630 ARG2 Acetylglutamate synthase [Amino acid transport and metabolism]
Probab=44.78 E-value=66 Score=30.95 Aligned_cols=59 Identities=19% Similarity=0.358 Sum_probs=39.5
Q ss_pred ccEEEEEEEEeCccccc-CCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHHHHhhCCCEE
Q 019558 87 AKVGYVLGLRVAPLHRR-KGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKLFVNKLGYVN 149 (339)
Q Consensus 87 ~~~~~I~~l~V~P~~Rg-kGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY~k~GF~~ 149 (339)
..+.|+..++|.++.|| .||+..++.-+.+..-.. +.+-...+|++..=.|-+.-||-+
T Consensus 398 ~~vpYLDKfAVl~~aQGs~gisd~vfniM~e~fP~e----L~WRSR~~N~vNkwYf~rSvg~lk 457 (495)
T COG5630 398 NNVPYLDKFAVLDDAQGSEGISDAVFNIMREEFPNE----LFWRSRHNNQVNKWYFARSVGYLK 457 (495)
T ss_pred CCCcceeeeeccccccccchHHHHHHHHHHHhCcHh----hhhhhcccCcchheeeehhhehhh
Confidence 35689999999999999 999999998887755422 333455666653222224455543
No 156
>COG1247 Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane]
Probab=43.28 E-value=1.2e+02 Score=25.78 Aligned_cols=105 Identities=13% Similarity=0.138 Sum_probs=63.4
Q ss_pred eEeecCHHHHHH---HHHHhcc----CCCCCCCChhhhhh---ccCCcc-eEEEeeeC-CcccccCCCCCCCCCceEEEE
Q 019558 172 QIRKLRIEEAEN---LYYKFMA----STEFFPYDIGNILR---NKLSLG-TWVAYPRG-EIVGEFGSNGQIFPKSWAMVS 239 (339)
Q Consensus 172 ~i~~l~~~da~~---l~~~~~~----~~~~~p~d~~~~L~---~~l~~g-t~~a~~~~-~~~~~~~~~~~~~~~~~a~~s 239 (339)
.|+....+|... +|..... ..+..|.+.+.... .+...| -+++.+.. +.. .+||+++
T Consensus 3 ~ir~~~~~Dl~~I~~IY~~~v~~~~a~~e~~~~~~~~~~~~~~~~~~~g~p~~V~~~~~g~v-----------~G~a~~~ 71 (169)
T COG1247 3 EIRPATAADLEAILEIYNGAVENTAATFEEDPVSLEERAAWFSGRTRDGYPVVVAEEEDGKV-----------LGYASAG 71 (169)
T ss_pred EEecChHHhHHHHHHHHHHhhhcceEEEeccCCCHHHHHHHHHhcccCCceEEEEEcCCCeE-----------EEEEEee
Confidence 344555555543 3444332 34667777766652 233334 22333322 332 3788888
Q ss_pred EEecCcceecc--------CCCChHHHHHHHHHhhhhccccCCCCceEEEEeccccch
Q 019558 240 VWNSGELFKLR--------EGPLSGKMVRTLCQFVHNMAGTKSKDCKVIVTEVGGSDA 289 (339)
Q Consensus 240 vw~~~~~~~l~--------~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~dp 289 (339)
=|+...+|+=- +..++..+-++|++.....++ +.|...+.+-+...+.
T Consensus 72 ~fr~r~ay~~tve~SiYv~~~~~g~GiG~~Ll~~Li~~~~--~~g~~~lva~I~~~n~ 127 (169)
T COG1247 72 PFRERPAYRHTVELSIYLDPAARGKGLGKKLLQALITEAR--ALGVRELVAGIESDNL 127 (169)
T ss_pred eccCccccceEEEEEEEECcccccccHHHHHHHHHHHHHH--hCCeEEEEEEEcCCCc
Confidence 77777776543 666666777777777777788 8888888888887775
No 157
>PRK03624 putative acetyltransferase; Provisional
Probab=42.99 E-value=84 Score=24.27 Aligned_cols=37 Identities=14% Similarity=0.112 Sum_probs=30.8
Q ss_pred CCCChHHHHHHHHHhhhhccccCCCCceEEEEeccccch
Q 019558 251 EGPLSGKMVRTLCQFVHNMAGTKSKDCKVIVTEVGGSDA 289 (339)
Q Consensus 251 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~dp 289 (339)
+..++..+.+.|+.++.+.++ +.|+..+.+.+...++
T Consensus 78 p~~rg~Gig~~ll~~~~~~~~--~~~~~~~~~~~~~~N~ 114 (140)
T PRK03624 78 PDFRGRGIGRALVARLEKKLI--ARGCPKINLQVREDND 114 (140)
T ss_pred HHHhCCCHHHHHHHHHHHHHH--HCCCCEEEEEEecCcH
Confidence 666777788889999999888 8899999998887764
No 158
>COG2898 Uncharacterized conserved protein [Function unknown]
Probab=42.44 E-value=2.9e+02 Score=28.09 Aligned_cols=60 Identities=13% Similarity=0.041 Sum_probs=45.2
Q ss_pred EEECCeEEEEEEEEEeeccccCCCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEE
Q 019558 60 AELDRELVGVIQGSIKQVTVQKPHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMA 129 (339)
Q Consensus 60 Ae~~geiVG~i~~~~~~~~~~~~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~ 129 (339)
...+|+|||++.+..... .....+..++-+|+-= +|+-..|+-.+..++|+.|++.+.+.
T Consensus 398 ~~~~g~VvaFa~l~~~~~---------~~~~SlDlMR~sp~ap-~g~mdfLf~~li~~aKe~G~~~fsLg 457 (538)
T COG2898 398 VDNEGEVVAFANLMPTGG---------KEGYSLDLMRRSPDAP-NGTMDFLFSELILWAKEEGYQRFSLG 457 (538)
T ss_pred EcCCCCeEEEEeecccCC---------cceeEEEeeecCCCCC-chHHHHHHHHHHHHHHHcCCeEEecC
Confidence 344688999997754331 1226677788888876 69999999999999999999766544
No 159
>PF11124 Pho86: Inorganic phosphate transporter Pho86; InterPro: IPR024297 Pho86p is an ER protein which is produced in response to phosphate starvation. It is essential for growth when phosphate levels are limiting []. Pho86p is also involved in the regulation of Pho84p, a high-affinity phosphate transporter, which is localised to the endoplasmic reticulum (ER) in low phosphate medium. When the level of phosphate increases Pho84p is transported to the vacuole. Pho86p is required for packaging of Pho84p in to COPII vesicles [].
Probab=40.85 E-value=2.1e+02 Score=26.72 Aligned_cols=88 Identities=11% Similarity=0.051 Sum_probs=60.6
Q ss_pred EEEECCeEEEEEEEEEeeccccCCCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhC---------CCc-EEEE
Q 019558 59 VAELDRELVGVIQGSIKQVTVQKPHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSN---------DVD-YAYM 128 (339)
Q Consensus 59 VAe~~geiVG~i~~~~~~~~~~~~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~---------g~~-~i~l 128 (339)
+....+.+|+.+++...... .....-+.-|.++.|..=|..-|+=.-|+++++-+.++. |.. .+..
T Consensus 173 IIvYRetPIAiisl~~~~~~----St~~~~vv~ItgigvRkVy~Ksgi~e~LidWA~~Rtr~l~~ey~k~k~~~si~ll~ 248 (304)
T PF11124_consen 173 IIVYRETPIAIISLVPNKDQ----STKENFVVKITGIGVRKVYVKSGIDEDLIDWAMLRTRQLYKEYLKGKKGCSIKLLV 248 (304)
T ss_pred EEEEcCCceEEEEecccccc----CCCceEEEEEeeeEEEEEEeecChHHHHHHHHHHHHHHHHHHhccccccceEEEEE
Confidence 33445688999977554322 123334567899999999999999999999997766652 111 2333
Q ss_pred EeccCChHHHHHHHhhCCCEEee
Q 019558 129 ATEKDNEASVKLFVNKLGYVNFR 151 (339)
Q Consensus 129 ~v~~~N~~a~~lfY~k~GF~~~~ 151 (339)
.+..-...-.+. .++.||....
T Consensus 249 d~YSFD~~~~k~-L~~~gF~~i~ 270 (304)
T PF11124_consen 249 DVYSFDKDMKKT-LKKKGFKKIS 270 (304)
T ss_pred EeeeccHHHHHH-HHHCCCeeee
Confidence 456666666676 8899999866
No 160
>COG5653 Protein involved in cellulose biosynthesis (CelD) [Cell envelope biogenesis, outer membrane]
Probab=39.55 E-value=3.7e+02 Score=26.21 Aligned_cols=72 Identities=14% Similarity=0.042 Sum_probs=52.3
Q ss_pred cCCCceEEEEEECCeEEEEEEEEEeeccccCCCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEe
Q 019558 51 NSPMYKMLVAELDRELVGVIQGSIKQVTVQKPHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMAT 130 (339)
Q Consensus 51 ~~~~~~~~VAe~~geiVG~i~~~~~~~~~~~~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v 130 (339)
.+.....+..+.+|.+|+........ .+.+-....++|++=+--=|..|+-.+++|+-+.|+...-+.+
T Consensus 268 ~d~~~rl~gL~~G~~lvAV~~~lr~~-----------~t~h~~l~a~dpe~~~~SPG~~lf~d~i~~~~~~g~~~~Dfgv 336 (406)
T COG5653 268 EDGSGRLFGLHAGGRLVAVHGLLRQG-----------GTYHAWLGAIDPEFARASPGMLLFLDLIEWACGQGLARFDFGV 336 (406)
T ss_pred cCCceEEEEEeeCCEEEEEEeeeccC-----------CEEEEEeeccCHHHhhcCchHHHHHHHHHHHhcCCCeEEeecC
Confidence 33445667777888999877443222 2244455678999999999999999999999999997766655
Q ss_pred ccC
Q 019558 131 EKD 133 (339)
Q Consensus 131 ~~~ 133 (339)
..+
T Consensus 337 G~q 339 (406)
T COG5653 337 GDQ 339 (406)
T ss_pred CCh
Confidence 443
No 161
>PF13420 Acetyltransf_4: Acetyltransferase (GNAT) domain; PDB: 3DR8_A 3DR6_A 2AE6_B 2JLM_C 2J8R_A 1YVO_B 2J8M_A 2J8N_A 2BL1_A 3IWG_A ....
Probab=38.47 E-value=41 Score=27.07 Aligned_cols=41 Identities=17% Similarity=0.008 Sum_probs=30.4
Q ss_pred ccCCCChHHHHHHHHHhhhhcc-ccCCCCceEEEEeccccchhc
Q 019558 249 LREGPLSGKMVRTLCQFVHNMA-GTKSKDCKVIVTEVGGSDALR 291 (339)
Q Consensus 249 l~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~dp~~ 291 (339)
+.+..++..+.+.|+.++.+.| + +.|+..+.++|-..++..
T Consensus 84 v~~~~~~~gig~~l~~~l~~~af~--~~~~~~i~~~v~~~N~~~ 125 (155)
T PF13420_consen 84 VSPDYRGKGIGRKLLDELIEYAFK--ELGIHKIYLEVFSSNEKA 125 (155)
T ss_dssp EEGGGTTSSHHHHHHHHHHHHH-H--HTT-CEEEEEEETT-HHH
T ss_pred EChhHCCCcHHHHHHHHHHHHhhh--ccCeEEEEEEEecCCHHH
Confidence 3355667777788888888888 7 889999999999888643
No 162
>TIGR01575 rimI ribosomal-protein-alanine acetyltransferase. Members of this model belong to the GCN5-related N-acetyltransferase (GNAT) superfamily. This model covers prokarotes and the archaea. The seed contains a characterized accession for Gram negative E. coli. An untraceable characterized accession (PIR|S66013) for Gram positive B. subtilis scores well (205.0) in the full alignment. Characterized members are lacking in the archaea. Noise cutoff (72.4) was set to exclude M. loti paralog of rimI. Trusted cutoff (80.0) was set at next highest scoring member in the mini-database.
Probab=36.93 E-value=1.9e+02 Score=21.96 Aligned_cols=37 Identities=19% Similarity=0.085 Sum_probs=27.5
Q ss_pred CCCChHHHHHHHHHhhhhccccCCCCceEEEEeccccch
Q 019558 251 EGPLSGKMVRTLCQFVHNMAGTKSKDCKVIVTEVGGSDA 289 (339)
Q Consensus 251 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~dp 289 (339)
+..++..+.++|++++.+.+. +.|+..+.+++...++
T Consensus 64 ~~~rg~G~g~~ll~~~~~~~~--~~~~~~i~~~~~~~n~ 100 (131)
T TIGR01575 64 PEYQGQGIGRALLRELIDEAK--GRGVNEIFLEVRVSNI 100 (131)
T ss_pred HHHcCCCHHHHHHHHHHHHHH--HcCCCeEEEEEecccH
Confidence 445566677777777777777 7788888888887665
No 163
>TIGR01890 N-Ac-Glu-synth amino-acid N-acetyltransferase. This model represents a clade of amino-acid N-acetyltransferases acting mainly on glutamate in the first step of the "acetylated" ornithine biosynthesis pathway. For this reason it is also called N-acetylglutamate synthase. The enzyme may also act on aspartate.
Probab=31.33 E-value=1e+02 Score=30.26 Aligned_cols=95 Identities=7% Similarity=0.046 Sum_probs=52.6
Q ss_pred eEeecCHHHHHHHHHHhc---cCCCCCCCChhhhhhccCCcceEEEeeeCCcccccCCCCCCCCCceEEEEEEecCccee
Q 019558 172 QIRKLRIEEAENLYYKFM---ASTEFFPYDIGNILRNKLSLGTWVAYPRGEIVGEFGSNGQIFPKSWAMVSVWNSGELFK 248 (339)
Q Consensus 172 ~i~~l~~~da~~l~~~~~---~~~~~~p~d~~~~L~~~l~~gt~~a~~~~~~~~~~~~~~~~~~~~~a~~svw~~~~~~~ 248 (339)
.+++.+.+|...+.+... ......+.+.+.+ .... ..+..+..++... +++.+..+.......
T Consensus 284 ~IR~at~~Dl~~I~~L~~~~~~~~~~~~~~~~~l-~~~~--~~~~V~~~dg~iV-----------G~~~~~~~~~~~~~~ 349 (429)
T TIGR01890 284 SIRQATIDDIGGIAALIRPLEEQGILVRRSREYL-EREI--SEFSIIEHDGNII-----------GCAALYPYAEEDCGE 349 (429)
T ss_pred heEECCHHHHHHHHHHHHHHHHcCCchhhhHHHH-Hhhc--CcEEEEEECCEEE-----------EEEEEEecCCCCeEE
Confidence 578888888877655432 2211123333332 2222 3355555555443 344444433222222
Q ss_pred c-----cCCCChHHHHHHHHHhhhhccccCCCCceEEEE
Q 019558 249 L-----REGPLSGKMVRTLCQFVHNMAGTKSKDCKVIVT 282 (339)
Q Consensus 249 l-----~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 282 (339)
+ .+..++..+-++|++++-+.|+ +.||..+++
T Consensus 350 I~~l~V~p~~Rg~GiG~~Ll~~l~~~A~--~~G~~~l~v 386 (429)
T TIGR01890 350 MACLAVSPEYQDGGRGERLLAHIEDRAR--QMGISRLFV 386 (429)
T ss_pred EEEEEECHHHcCCCHHHHHHHHHHHHHH--HcCCCEEEE
Confidence 2 2677777788888888888888 888876643
No 164
>PHA02769 hypothetical protein; Provisional
Probab=31.23 E-value=53 Score=25.91 Aligned_cols=50 Identities=22% Similarity=0.226 Sum_probs=29.1
Q ss_pred HHHHHHHH---HHHHHhCCCcEEEEEeccCChHHHHHHHhhCCCEEeecCeeeecc
Q 019558 107 GSSLVCKL---EEWFTSNDVDYAYMATEKDNEASVKLFVNKLGYVNFRTPAILVHP 159 (339)
Q Consensus 107 G~~Ll~~~---~~~a~~~g~~~i~l~v~~~N~~a~~lfY~k~GF~~~~~~~~~~~p 159 (339)
|.-|+..+ .+.++..|++.++.--.++. |-++ |.|.||..++....-.+|
T Consensus 94 gd~lvnfl~~l~~k~~~dg~evlwtlgfpdh--snal-y~kagfk~vg~tsrtkh~ 146 (154)
T PHA02769 94 GDHLVNFLNDLAEKLKKDGFEVLWTLGFPDH--SNAL-YKKAGFKLVGQTSRTKHE 146 (154)
T ss_pred hHHHHHHHHHHHHHHhcCCeEEEEEecCCCc--chhH-HhhhhhhHhcccccccCc
Confidence 44555544 44555668765443333333 3355 999999988775544443
No 165
>PRK05279 N-acetylglutamate synthase; Validated
Probab=27.43 E-value=1.5e+02 Score=29.17 Aligned_cols=97 Identities=8% Similarity=0.097 Sum_probs=52.5
Q ss_pred eeEeecCHHHHHHHHHHhcc--CCCC-CCCChhhhhhccCCcceEEEeeeCCcccccCCCCCCCCCceEEEEEEecCc--
Q 019558 171 VQIRKLRIEEAENLYYKFMA--STEF-FPYDIGNILRNKLSLGTWVAYPRGEIVGEFGSNGQIFPKSWAMVSVWNSGE-- 245 (339)
Q Consensus 171 ~~i~~l~~~da~~l~~~~~~--~~~~-~p~d~~~~L~~~l~~gt~~a~~~~~~~~~~~~~~~~~~~~~a~~svw~~~~-- 245 (339)
..+++.+++|+..+.+.... ...+ .+.+.+.+ .... ..+.++..++...| ++.+..+....
T Consensus 295 ~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~~~l-~~~~--~~~~va~~dg~iVG-----------~~~~~~~~~~~~~ 360 (441)
T PRK05279 295 EQLRRATIDDVGGILELIRPLEEQGILVRRSREQL-EREI--DKFTVIERDGLIIG-----------CAALYPFPEEKMG 360 (441)
T ss_pred HHeEeCCHHHHHHHHHHHHHHHHcCCccccCHHHH-hccc--CcEEEEEECCEEEE-----------EEEEEEcCCCCeE
Confidence 46788888888776554321 1112 22233322 2222 23444455554433 33333322211
Q ss_pred -c--eeccCCCChHHHHHHHHHhhhhccccCCCCceEEEEe
Q 019558 246 -L--FKLREGPLSGKMVRTLCQFVHNMAGTKSKDCKVIVTE 283 (339)
Q Consensus 246 -~--~~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 283 (339)
+ +-+.+..++..+.++|++++.+.|+ +.||..+.+.
T Consensus 361 ~I~~l~V~p~~Rg~GiG~~Ll~~l~~~a~--~~g~~~l~l~ 399 (441)
T PRK05279 361 EMACLAVHPDYRGSGRGERLLKRIEQRAR--QLGLKRLFVL 399 (441)
T ss_pred EEEEEEECHHHcCCCHHHHHHHHHHHHHH--HcCCCEEEEe
Confidence 1 2222777778888889999999998 8898877654
No 166
>PF12953 DUF3842: Domain of unknown function (DUF3842); InterPro: IPR024208 This family of proteins has no known function.
Probab=27.26 E-value=89 Score=25.32 Aligned_cols=45 Identities=20% Similarity=0.186 Sum_probs=33.5
Q ss_pred ccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHHHHhhCCCEE
Q 019558 100 LHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKLFVNKLGYVN 149 (339)
Q Consensus 100 ~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY~k~GF~~ 149 (339)
+=||=|||+.+++.+.+.+.+. +.....-+|..|... .-|.|-..
T Consensus 6 DGQGGGiG~~iv~~lr~~~~~~----~eI~AlGTNa~AT~~-MlKaGA~~ 50 (131)
T PF12953_consen 6 DGQGGGIGKQIVEKLRKELPEE----VEIIALGTNAIATSA-MLKAGANE 50 (131)
T ss_pred eCCCChhHHHHHHHHHHhCCCC----cEEEEEehhHHHHHH-HHHcCCCC
Confidence 3478899999999988876552 455566777777777 77888764
No 167
>PRK07757 acetyltransferase; Provisional
Probab=26.50 E-value=2.5e+02 Score=22.29 Aligned_cols=32 Identities=16% Similarity=0.025 Sum_probs=21.9
Q ss_pred CCCChHHHHHHHHHhhhhccccCCCCceEEEEec
Q 019558 251 EGPLSGKMVRTLCQFVHNMAGTKSKDCKVIVTEV 284 (339)
Q Consensus 251 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 284 (339)
+..++..+.+.|+.++...|. +.|+..+.+.+
T Consensus 75 p~~rg~Glg~~Ll~~l~~~a~--~~g~~~i~~~~ 106 (152)
T PRK07757 75 EDYRGQGIGRMLVEACLEEAR--ELGVKRVFALT 106 (152)
T ss_pred HHHcCCCHHHHHHHHHHHHHH--hCCCCeEEEEe
Confidence 555666677777777777777 67877775544
No 168
>PF12746 GNAT_acetyltran: GNAT acetyltransferase; PDB: 3G3S_B.
Probab=23.46 E-value=2.9e+02 Score=25.31 Aligned_cols=93 Identities=11% Similarity=0.025 Sum_probs=54.3
Q ss_pred ccCCCceeEeecCHHHHHHHHHHhccC--CCCCCCChhhhhhccCCcceEEEeeeCCcccccCCCCCCCCCceEEEEEEe
Q 019558 165 FHTPSNVQIRKLRIEEAENLYYKFMAS--TEFFPYDIGNILRNKLSLGTWVAYPRGEIVGEFGSNGQIFPKSWAMVSVWN 242 (339)
Q Consensus 165 ~~~~~~~~i~~l~~~da~~l~~~~~~~--~~~~p~d~~~~L~~~l~~gt~~a~~~~~~~~~~~~~~~~~~~~~a~~svw~ 242 (339)
..+|.++.+++++.+..+......+.. .+.| .+.+.++++ |-..++..++.. .|+| .|...
T Consensus 123 ~~lp~~y~l~~Ide~l~~~~~~e~~s~d~~~~~-~s~e~Fl~~----G~Gf~i~~~~~i-----------Vs~~-~s~~~ 185 (265)
T PF12746_consen 123 SALPEGYELKRIDEELYENSLEEEWSEDLVSQF-SSYEDFLKN----GFGFCILHDGEI-----------VSGC-SSYFV 185 (265)
T ss_dssp HCS-TTCEEEE--HHHHHHHHHSCCCGGGTTTS-SSHHHHHHH------EEEEEETTEE-----------EEEE-EEEEE
T ss_pred hcCCCCeEEEECCHHHHHhhhhhHhHHHHHHhc-CCHHHHHhc----CcEEEEEECCEE-----------EEEE-EEEEE
Confidence 368899999999988776664433321 1223 356666543 644444444432 1332 33334
Q ss_pred cCcceecc----CCCChHHHHHHHHHhhhhccccCCCC
Q 019558 243 SGELFKLR----EGPLSGKMVRTLCQFVHNMAGTKSKD 276 (339)
Q Consensus 243 ~~~~~~l~----~~~~~~~l~~~l~~~~~~~~~~~~~~ 276 (339)
+..+--++ +..++..|++++++..-..+. ++|
T Consensus 186 ~~~~~EI~I~T~~~yR~kGLA~~~aa~~I~~Cl--~~~ 221 (265)
T PF12746_consen 186 YENGIEIDIETHPEYRGKGLATAVAAAFILECL--ENG 221 (265)
T ss_dssp ETTEEEEEEEE-CCCTTSSHHHHHHHHHHHHHH--HTT
T ss_pred ECCEEEEEEEECHHhhcCCHHHHHHHHHHHHHH--HCC
Confidence 44453444 889999999999999999988 665
No 169
>PF11090 DUF2833: Protein of unknown function (DUF2833); InterPro: IPR020335 This entry contains proteins with no known function.
Probab=23.27 E-value=3.3e+02 Score=20.43 Aligned_cols=42 Identities=12% Similarity=0.143 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHHHHhhCCCEEe
Q 019558 106 IGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKLFVNKLGYVNF 150 (339)
Q Consensus 106 IG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY~k~GF~~~ 150 (339)
.-+.+...+....+. ++.++=.|...|..++++ .+.+|++-.
T Consensus 41 F~k~i~~~~d~~l~~--Y~~l~N~V~~~N~~HIRf-Lk~lGA~f~ 82 (86)
T PF11090_consen 41 FRKLIKEYLDKMLKQ--YPVLWNFVWVGNKSHIRF-LKSLGAVFH 82 (86)
T ss_pred HHHHHHHHHHHHHHH--hhheeEEEEeCCHHHHHH-HHhcCcEEc
Confidence 444444444444444 445777799999999998 999999853
No 170
>TIGR00667 aat leucyl/phenylalanyl-tRNA--protein transferase. The N-terminal residue controls the biological half-life of many proteins via the N-end rule pathway. This enzyme transfers a Leu or Phe to the amino end of certain proteins to enable degradation.
Probab=22.87 E-value=5e+02 Score=22.44 Aligned_cols=76 Identities=14% Similarity=0.073 Sum_probs=46.9
Q ss_pred ceEEEEEECCeEEEEEEEEEeeccccCCCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCC
Q 019558 55 YKMLVAELDRELVGVIQGSIKQVTVQKPHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDN 134 (339)
Q Consensus 55 ~~~~VAe~~geiVG~i~~~~~~~~~~~~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N 134 (339)
...+=+.++|++||-..+..-+. ++.+.-.. +|...-++.-+-++.+.+++.|++.+- +--.|
T Consensus 98 AHSvEvw~~~~LvGGlYGv~iG~------------~F~GESMF---s~~~nASKvAl~~L~~~L~~~g~~liD--cQ~~t 160 (185)
T TIGR00667 98 AHSFEVWQGDELVGGMYGIAQGG------------LFCGESMF---SRMTNASKTALLVFCEHFIRHGGQLID--CQVQN 160 (185)
T ss_pred eEEEEEEECCEEEEeeeeeeeCC------------eEEecccc---ccCCChhHHHHHHHHHHHHHCCCcEEE--ECCCC
Confidence 44455567899999775533221 11111111 455578888899999999999986654 44444
Q ss_pred hHHHHHHHhhCCCEEeec
Q 019558 135 EASVKLFVNKLGYVNFRT 152 (339)
Q Consensus 135 ~~a~~lfY~k~GF~~~~~ 152 (339)
+. ..++|-+.+.+
T Consensus 161 ~H-----L~slGa~ei~R 173 (185)
T TIGR00667 161 PH-----LASLGAYEVPR 173 (185)
T ss_pred HH-----HHhcCCEEcCH
Confidence 43 56777766443
No 171
>PF03588 Leu_Phe_trans: Leucyl/phenylalanyl-tRNA protein transferase; InterPro: IPR004616 Leucyl/phenylalanyl-tRNA--protein transferase 2.3.2.6 from EC transfers a Leu or Phe to the amino end of certain proteins to enable degradation. The N-terminal residue controls the biological half-life of many proteins via the N-end rule pathway.; GO: 0008914 leucyltransferase activity, 0030163 protein catabolic process; PDB: 2Z3L_A 2Z3O_A 2Z3P_A 2DPT_B 2Z3M_B 2Z3N_B 2DPS_B 2Z3K_B 2CXA_A.
Probab=22.34 E-value=4.9e+02 Score=22.18 Aligned_cols=82 Identities=12% Similarity=0.001 Sum_probs=47.4
Q ss_pred hHHhhcCCCceEEEEEECCeEEEEEEEEEeeccccCCCCCCccEEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcE
Q 019558 46 ICRIRNSPMYKMLVAELDRELVGVIQGSIKQVTVQKPHEDLAKVGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDY 125 (339)
Q Consensus 46 l~~~~~~~~~~~~VAe~~geiVG~i~~~~~~~~~~~~~~~~~~~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~ 125 (339)
..++........+=+.+++++||-..+..-+..+ .-.+++. |..+-++.-+-.+.+++++.|+..
T Consensus 89 Y~~Lh~~G~aHSvEvw~~~~LvGGlyGv~iG~~F----------~GESMFs-----~~~~ASKval~~L~~~L~~~g~~l 153 (173)
T PF03588_consen 89 YTELHELGYAHSVEVWQGGELVGGLYGVAIGGVF----------FGESMFS-----RVSNASKVALVALVEHLRQCGFQL 153 (173)
T ss_dssp HHHHHHTTSEEEEEEEETTEEEEEEEEEEETTEE----------EEEEEEE-----SSTTHHHHHHHHHHHHHHHTT--E
T ss_pred HHHHHHcCeeEEEeeecCCeeEEeeeCEEECCEE----------Eeccccc-----cCCChHHHHHHHHHHHHHHCCCcE
Confidence 3334333334455566789999987664433111 1123333 335679999999999999999977
Q ss_pred EEEEeccCChHHHHHHHhhCCCEE
Q 019558 126 AYMATEKDNEASVKLFVNKLGYVN 149 (339)
Q Consensus 126 i~l~v~~~N~~a~~lfY~k~GF~~ 149 (339)
+.+.+ .|+. .+++|-+.
T Consensus 154 iD~Q~--~~~h-----l~slGa~~ 170 (173)
T PF03588_consen 154 IDCQM--PTPH-----LASLGAKE 170 (173)
T ss_dssp EEEES----HH-----HHHTTEEE
T ss_pred EEecc--CCHH-----HHhcCCEe
Confidence 76654 3442 55677554
No 172
>PRK04531 acetylglutamate kinase; Provisional
Probab=21.78 E-value=1.9e+02 Score=28.24 Aligned_cols=50 Identities=16% Similarity=0.208 Sum_probs=39.4
Q ss_pred EEEEEEEEeCcccccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCChHHHHHHHhh
Q 019558 89 VGYVLGLRVAPLHRRKGIGSSLVCKLEEWFTSNDVDYAYMATEKDNEASVKLFVNK 144 (339)
Q Consensus 89 ~~~I~~l~V~P~~RgkGIG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~lfY~k 144 (339)
..|+..++|.++.||.|++..++..+.+.. ..+.+.+.++|+. .+.||+|
T Consensus 310 ~~~Ldkf~v~~~~~~~~v~d~vf~~~~~~~-----~~L~Wrsr~~n~~-~~Wyf~~ 359 (398)
T PRK04531 310 GPYLDKFAVLDDARGEGLGRAVWNVMREET-----PQLFWRSRHNNTI-NKFYYAE 359 (398)
T ss_pred ceEeEEEEEccchhhcChHHHHHHHHHhhC-----CceEEEcCCCCCc-cceeeec
Confidence 489999999999999999999999987754 3577777777775 3554544
No 173
>COG3473 Maleate cis-trans isomerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=21.37 E-value=3.4e+02 Score=24.14 Aligned_cols=65 Identities=11% Similarity=0.095 Sum_probs=44.8
Q ss_pred HHHHHHhCCCcEEEEEe---ccCChHHHHHHHhhCCCEEeecCeeeecccccccccCCCceeEeecCHHHHHHHHHHhc
Q 019558 114 LEEWFTSNDVDYAYMAT---EKDNEASVKLFVNKLGYVNFRTPAILVHPVNNRMFHTPSNVQIRKLRIEEAENLYYKFM 189 (339)
Q Consensus 114 ~~~~a~~~g~~~i~l~v---~~~N~~a~~lfY~k~GF~~~~~~~~~~~p~~~~~~~~~~~~~i~~l~~~da~~l~~~~~ 189 (339)
+.+.++..|++++.+-+ .+-|..-..+ +++.||+..... ...++.+..+-+++|..+..+.++.+
T Consensus 109 vv~aL~al~a~ri~vlTPY~~evn~~e~ef-~~~~Gfeiv~~~----------~Lgi~dn~eigr~~P~~~y~lAk~~~ 176 (238)
T COG3473 109 VVEALNALGAQRISVLTPYIDEVNQREIEF-LEANGFEIVDFK----------GLGITDNLEIGRQEPWAVYRLAKEVF 176 (238)
T ss_pred HHHHHHhhCcceEEEeccchhhhhhHHHHH-HHhCCeEEEEee----------ccCCcccchhcccChHHHHHHHHHhc
Confidence 34445566777776654 5677776665 999999975432 23456777888888888877766664
No 174
>COG5270 PUA domain (predicted RNA-binding domain) [Translation, ribosomal structure and biogenesis]
Probab=21.21 E-value=1.3e+02 Score=26.03 Aligned_cols=20 Identities=20% Similarity=0.212 Sum_probs=15.0
Q ss_pred ceEEEEEECCeEEEEEEEEE
Q 019558 55 YKMLVAELDRELVGVIQGSI 74 (339)
Q Consensus 55 ~~~~VAe~~geiVG~i~~~~ 74 (339)
..++|+..+|+++|+..+..
T Consensus 163 d~viVv~~ng~~vGVg~a~~ 182 (202)
T COG5270 163 DEVIVVSENGRVVGVGIAKK 182 (202)
T ss_pred CeEEEEecCCEEEEEEEEec
Confidence 45677788899999886643
No 175
>PF11548 Receptor_IA-2: Protein-tyrosine phosphatase receptor IA-2; InterPro: IPR021613 IA-2 is a protein-tyrosine phosphatase receptor that upon exocytosis, the cytoplasmic domain is cleaved and moves to the nucleus where it enhances transcription of the insulin gene. The mature exodomain of IA-2 participates in adhesion to the extracellular matrix and is self-proteolyzed in vitro by reactive oxygen species which may be a new shedding mechanism. ; PDB: 2QT7_B 3N01_B 3N4W_B 3NG8_A.
Probab=21.15 E-value=1e+02 Score=23.39 Aligned_cols=54 Identities=17% Similarity=0.280 Sum_probs=37.9
Q ss_pred CCceEEEEEEecCcceecc---CCCChHHHHHHHHHhhhhccccCCCCceEEEEecccc
Q 019558 232 PKSWAMVSVWNSGELFKLR---EGPLSGKMVRTLCQFVHNMAGTKSKDCKVIVTEVGGS 287 (339)
Q Consensus 232 ~~~~a~~svw~~~~~~~l~---~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (339)
+.++.-+||-..--.||++ -+-.+..+.+.....-.++.+ ..|.++|-++||..
T Consensus 34 s~~F~~i~V~g~avTFrv~~N~~n~taadVa~~a~~~K~~Le~--~tG~~Iv~tGvG~r 90 (91)
T PF11548_consen 34 SSSFINISVVGPAVTFRVRPNNKNLTAADVAKQAVDNKNQLEK--ETGLKIVQTGVGDR 90 (91)
T ss_dssp GGGEEEEEEETTEEEEEE---TT---HHHHHHHHHHTHHHHHH--HHSS-EEEEEEE--
T ss_pred cccceeeeecCceEEEEeccCcCCCCHHHHHHHHHHhHHHHHH--hhCcEEeecccccC
Confidence 3567777777777789999 344577788888888888888 88999999999864
Done!