BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019563
(339 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 16/116 (13%)
Query: 200 EEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFF 259
+E F+ D DGDG + E + +NP ++ + E D+D DG ++F EF
Sbjct: 305 KEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAEL--QDMINEVDADGDGTIDFPEFL 361
Query: 260 HGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKL 315
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 362 IMMARKMKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNL 404
Score = 34.3 bits (77), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 48/129 (37%), Gaps = 8/129 (6%)
Query: 132 ADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSF 191
DG I EL + Q + D + DG + F E+ + D +S
Sbjct: 315 GDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLIMMARKMKDTDS- 373
Query: 192 GYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDG 251
E F D DG+G ++ E H KL E +RE D D DG
Sbjct: 374 ----EEEIREAFRVFDKDGNGYISAAELR---HVMTNLGEKLTDEEVDEMIREADIDGDG 426
Query: 252 KVNFKEFFH 260
+VN++EF
Sbjct: 427 QVNYEEFVQ 435
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 16/116 (13%)
Query: 200 EEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFF 259
+E F+ D DGDG + E + +NP ++ + E D+D DG ++F EF
Sbjct: 313 KEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAEL--QDMINEVDADGDGTIDFPEFL 369
Query: 260 HGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKL 315
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 370 TMMARKMKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNL 412
Score = 35.4 bits (80), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 48/129 (37%), Gaps = 8/129 (6%)
Query: 132 ADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSF 191
DG I EL + Q + D + DG + F E+ + D +S
Sbjct: 323 GDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDS- 381
Query: 192 GYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDG 251
E F D DG+G ++ E H KL E +RE D D DG
Sbjct: 382 ----EEEIREAFRVFDKDGNGYISAAELR---HVMTNLGEKLTDEEVDEMIREADIDGDG 434
Query: 252 KVNFKEFFH 260
+VN++EF
Sbjct: 435 QVNYEEFVQ 443
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 16/115 (13%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D DG ++F EF
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGDGTIDFPEFLT 70
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKL 315
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 71 MMARKMKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNL 112
Score = 34.7 bits (78), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 8/96 (8%)
Query: 165 DKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLH 224
D + DG + F E+ + D +S E F D DG+G ++ E H
Sbjct: 56 DADGDGTIDFPEFLTMMARKMKDTDS-----EEEIREAFRVFDKDGNGYISAAELR---H 107
Query: 225 PADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
KL E +RE D D DG+VN++EF
Sbjct: 108 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 143
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 16/116 (13%)
Query: 200 EEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFF 259
+E F+ D DGDG + E + +NP ++ + E D+D DG ++F EF
Sbjct: 314 KEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAEL--QDMINEVDADGDGTIDFPEFL 370
Query: 260 HGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKL 315
+ ++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 371 TMMARKMKYTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNL 413
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F D DG+G ++ E H KL E +RE D D DG+VN++EF
Sbjct: 388 EAFRVFDKDGNGYISAAELR---HVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 444
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 16/116 (13%)
Query: 200 EEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFF 259
+E F+ D DGDG + E + +NP ++ + E D+D DG ++F EF
Sbjct: 313 KEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAEL--QDMINEVDADGDGTIDFPEFL 369
Query: 260 HGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKL 315
+ ++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 370 TMMARKMKYTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNL 412
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F D DG+G ++ E H KL E +RE D D DG+VN++EF
Sbjct: 387 EAFRVFDKDGNGYISAAELR---HVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 443
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 16/116 (13%)
Query: 200 EEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFF 259
+E F+ D DGDG + E + +NP ++ + E D+D DG ++F EF
Sbjct: 313 KEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAEL--QDMINEVDADGDGTIDFPEFL 369
Query: 260 HGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKL 315
+ ++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 370 TMMARKMKYTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNL 412
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F D DG+G ++ E H KL E +RE D D DG+VN++EF
Sbjct: 387 EAFRVFDKDGNGYISAAELR---HVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 443
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 16/116 (13%)
Query: 200 EEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFF 259
+E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 314 KEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAEL--QDMINEVDADGNGTIDFPEFL 370
Query: 260 HGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKL 315
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 371 TMMARKMKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNL 413
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 48/129 (37%), Gaps = 8/129 (6%)
Query: 132 ADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSF 191
DG I EL + Q + D + +G + F E+ + D +S
Sbjct: 324 GDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS- 382
Query: 192 GYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDG 251
E F D DG+G ++ E H KL E +RE D D DG
Sbjct: 383 ----EEEIREAFRVFDKDGNGYISAAELR---HVMTNLGEKLTDEEVDEMIREADIDGDG 435
Query: 252 KVNFKEFFH 260
+VN++EF
Sbjct: 436 QVNYEEFVQ 444
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 16/116 (13%)
Query: 200 EEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFF 259
+E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 315 KEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAEL--QDMINEVDADGNGTIDFPEFL 371
Query: 260 HGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKL 315
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 372 TMMARKMKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNL 414
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 48/129 (37%), Gaps = 8/129 (6%)
Query: 132 ADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSF 191
DG I EL + Q + D + +G + F E+ + D +S
Sbjct: 325 GDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS- 383
Query: 192 GYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDG 251
E F D DG+G ++ E H KL E +RE D D DG
Sbjct: 384 ----EEEIREAFRVFDKDGNGYISAAELR---HVMTNLGEKLTDEEVDEMIREADIDGDG 436
Query: 252 KVNFKEFFH 260
+VN++EF
Sbjct: 437 QVNYEEFVQ 445
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 16/116 (13%)
Query: 200 EEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFF 259
+E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 314 KEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAEL--QDMINEVDADGNGTIDFPEFL 370
Query: 260 HGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKL 315
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 371 TMMARKMKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNL 413
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 48/129 (37%), Gaps = 8/129 (6%)
Query: 132 ADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSF 191
DG I EL + Q + D + +G + F E+ + D +S
Sbjct: 324 GDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS- 382
Query: 192 GYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDG 251
E F D DG+G ++ E H KL E +RE D D DG
Sbjct: 383 ----EEEIREAFRVFDKDGNGYISAAELR---HVMTNLGEKLTDEEVDEMIREADIDGDG 435
Query: 252 KVNFKEFFH 260
+VN++EF
Sbjct: 436 QVNYEEFVQ 444
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 17/115 (14%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 10 EAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAEL--QDMINEVDADGNGTIDFPEFLT 66
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKL 315
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 67 MMARKMKDTDSE--------------EIREAFRVFDKDGNGYISAAELRHVMTNL 107
Score = 31.2 bits (69), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 9/96 (9%)
Query: 165 DKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLH 224
D + +G + F E+ + D +S E F D DG+G ++ E H
Sbjct: 52 DADGNGTIDFPEFLTMMARKMKDTDS------EEIREAFRVFDKDGNGYISAAELR---H 102
Query: 225 PADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
KL E +RE + D DG+VN++EF
Sbjct: 103 VMTNLGEKLTDEEVDEMIREANIDGDGQVNYEEFVQ 138
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 16/116 (13%)
Query: 200 EEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFF 259
+E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 277 KEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAEL--QDMINEVDADGNGTIDFPEFL 333
Query: 260 HGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKL 315
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 334 TMMARKMKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNL 376
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 48/129 (37%), Gaps = 8/129 (6%)
Query: 132 ADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSF 191
DG I EL + Q + D + +G + F E+ + D +S
Sbjct: 287 GDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS- 345
Query: 192 GYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDG 251
E F D DG+G ++ E H KL E +RE D D DG
Sbjct: 346 ----EEEIREAFRVFDKDGNGYISAAELR---HVMTNLGEKLTDEEVDEMIREADIDGDG 398
Query: 252 KVNFKEFFH 260
+VN++EF
Sbjct: 399 QVNYEEFVQ 407
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 16/116 (13%)
Query: 200 EEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFF 259
+E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 314 KEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAEL--QDMINEVDADGNGTIDFPEFL 370
Query: 260 HGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKL 315
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 371 TMMARWMKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNL 413
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 51/131 (38%), Gaps = 12/131 (9%)
Query: 132 ADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEP--PTWVRNSDNN 189
DG I EL + Q + D + +G + F E+ W++++D+
Sbjct: 324 GDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARWMKDTDSE 383
Query: 190 SFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDR 249
E F D DG+G ++ E H KL E +RE D D
Sbjct: 384 E-------EIREAFRVFDKDGNGYISAAELR---HVMTNLGEKLTDEEVDEMIREADIDG 433
Query: 250 DGKVNFKEFFH 260
DG+VN++EF
Sbjct: 434 DGQVNYEEFVQ 444
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 16/116 (13%)
Query: 200 EEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFF 259
+E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 280 KEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAEL--QDMINEVDADGNGTIDFPEFL 336
Query: 260 HGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKL 315
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 337 TMMARKMKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNL 379
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 48/129 (37%), Gaps = 8/129 (6%)
Query: 132 ADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSF 191
DG I EL + Q + D + +G + F E+ + D +S
Sbjct: 290 GDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS- 348
Query: 192 GYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDG 251
E F D DG+G ++ E H KL E +RE D D DG
Sbjct: 349 ----EEEIREAFRVFDKDGNGYISAAELR---HVMTNLGEKLTDEEVDEMIREADIDGDG 401
Query: 252 KVNFKEFFH 260
+VN++EF
Sbjct: 402 QVNYEEFVQ 410
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 16/115 (13%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 18 EAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLT 74
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKL 315
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 75 MMARKMKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNL 116
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F D DG+G ++ E H KL E +RE D D DG+VN++EF
Sbjct: 91 EAFRVFDKDGNGYISAAELR---HVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 147
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 16/116 (13%)
Query: 200 EEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFF 259
+E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 280 KEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAEL--QDMINEVDADGNGTIDFPEFL 336
Query: 260 HGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKL 315
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 337 TMMARKMKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNL 379
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 48/129 (37%), Gaps = 8/129 (6%)
Query: 132 ADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSF 191
DG I EL + Q + D + +G + F E+ + D +S
Sbjct: 290 GDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS- 348
Query: 192 GYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDG 251
E F D DG+G ++ E H KL E +RE D D DG
Sbjct: 349 ----EEEIREAFRVFDKDGNGYISAAELR---HVMTNLGEKLTDEEVDEMIREADIDGDG 401
Query: 252 KVNFKEFFH 260
+VN++EF
Sbjct: 402 QVNYEEFVQ 410
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 16/115 (13%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 12 EAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLT 68
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKL 315
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 69 MMARKMKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNL 110
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F D DG+G ++ E H KL E +RE D D DG+VN++EF
Sbjct: 85 EAFRVFDKDGNGYISAAELR---HVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 141
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 16/115 (13%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 15 EAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAEL--QDMINEVDADGNGTIDFPEFLT 71
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKL 315
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 72 MMARKMKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNL 113
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F D DG+G ++ E H KL E +RE D D DG+VN++EF
Sbjct: 88 EAFRVFDKDGNGYISAAELR---HVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 144
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 16/115 (13%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLT 70
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKL 315
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 71 MMARKMKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNL 112
Score = 31.2 bits (69), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F D DG+G ++ E H KL E +RE + D DG+VN++EF
Sbjct: 87 EAFRVFDKDGNGYISAAELR---HVMTNLGEKLTDEEVDEMIREANIDGDGQVNYEEFVQ 143
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 16/115 (13%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 10 EAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLT 66
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKL 315
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 67 MMARKMKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNL 108
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F D DG+G ++ E H KL E +RE D D DG+VN++EF
Sbjct: 83 EAFRVFDKDGNGYISAAELR---HVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 139
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 16/115 (13%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 15 EAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLT 71
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKL 315
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 72 MMARKMKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNL 113
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F D DG+G ++ E H KL E +RE D D DG+VN++EF
Sbjct: 88 EAFRVFDKDGNGYISAAELR---HVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 144
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 16/115 (13%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 15 EAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLT 71
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKL 315
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 72 MMARKMKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNL 113
Score = 32.0 bits (71), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F D DG+G ++ E H KL + +RE D D DG+VN++EF
Sbjct: 88 EAFRVFDKDGNGYISAAELR---HVMTNLGEKLTDEEVDQMIREADIDGDGQVNYEEFVQ 144
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 16/115 (13%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 20 EAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLT 76
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKL 315
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 77 MMARKMKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNL 118
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F D DG+G ++ E H KL E +RE D D DG+VN++EF
Sbjct: 93 EAFRVFDKDGNGYISAAELR---HVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 149
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 16/115 (13%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLT 70
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKL 315
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 71 MMARKMKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNL 112
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F D DG+G ++ E H KL E +RE D D DG+VN++EF
Sbjct: 87 EAFRVFDKDGNGYISAAELR---HVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 143
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 16/115 (13%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 16 EAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLT 72
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKL 315
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 73 MMARKMKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNL 114
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F D DG+G ++ E H KL E +RE D D DG+VN++EF
Sbjct: 89 EAFRVFDKDGNGYISAAELR---HVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 145
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 16/115 (13%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 12 EAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLT 68
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKL 315
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 69 MMARKMKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNL 110
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F D DG+G ++ E H KL E +RE D D DG+VN++EF
Sbjct: 85 EAFRVFDKDGNGYISAAELR---HVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 141
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 16/115 (13%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 15 EAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLT 71
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKL 315
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 72 MMARKMKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNL 113
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F D DG+G ++ E H KL E +RE D D DG+VN++EF
Sbjct: 88 EAFRVFDKDGNGYISAAELR---HVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 144
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 16/115 (13%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 12 EAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLT 68
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKL 315
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 69 MMARKMKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNL 110
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F D DG+G ++ E H KL E +RE D D DG+VN++EF
Sbjct: 85 EAFRVFDKDGNGYISAAELR---HVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 141
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 16/115 (13%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 15 EAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLT 71
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKL 315
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 72 MMARKMKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNL 113
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F D DG+G ++ E H L E +RE D D DG+VN++EF
Sbjct: 88 EAFRVFDKDGNGYISAAELR---HVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEEFVQ 144
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 16/115 (13%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLT 70
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKL 315
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 71 MMARKMKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNL 112
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F D DG+G ++ E H L E +RE D D DG+VN++EF
Sbjct: 87 EAFRVFDKDGNGYISAAELR---HVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEEFVQ 143
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 16/115 (13%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 11 EAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLT 67
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKL 315
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 68 MMARKMKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNL 109
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F D DG+G ++ E H KL E +RE D D DG+VN++EF
Sbjct: 84 EAFRVFDKDGNGYISAAELR---HVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 140
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 16/115 (13%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLT 70
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKL 315
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 71 MMARKMKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNL 112
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F D DG+G ++ E H KL E +RE D D DG+VN++EF
Sbjct: 87 EAFRVFDKDGNGYISAAELR---HVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 143
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 16/115 (13%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 13 EAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLT 69
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKL 315
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 70 MMARKMKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNL 111
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F D DG+G ++ E H KL E +RE D D DG+VN++EF
Sbjct: 86 EAFRVFDKDGNGYISAAELR---HVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 142
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 16/115 (13%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 15 EAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLT 71
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKL 315
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 72 MMARKMKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNL 113
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F D DG+G ++ E H KL E +RE D D DG+VN++EF
Sbjct: 88 EAFRVFDKDGNGYISAAELR---HVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 144
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 16/116 (13%)
Query: 200 EEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFF 259
+E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 314 KEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAEL--QDMINEVDADGNGTIDFPEFL 370
Query: 260 HGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKL 315
+ ++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 371 TMMARKMKYTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNL 413
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F D DG+G ++ E H KL E +RE D D DG+VN++EF
Sbjct: 388 EAFRVFDKDGNGYISAAELR---HVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 444
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 16/108 (14%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + L ++ + E D+D +G +NF EF
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAEL---QDXINEVDADGNGTINFPEFLT 70
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVEL 308
++ D E R+ F DKDG+GY+S EL
Sbjct: 71 XXARCXKDTDSE-------------EEIREAFRVFDKDGNGYISAAEL 105
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F D DG+G ++ E H KL E +RE D D DG+VN++EF
Sbjct: 87 EAFRVFDKDGNGYISAAELR---HVXTNLGEKLTDEEVDEXIREADIDGDGQVNYEEFVQ 143
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 54/119 (45%), Gaps = 24/119 (20%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVR----ERDSDRDGKVNFK 256
E F+ D DGDG + E + +NP ++ E+R E D D +G V+F
Sbjct: 14 EAFSLFDKDGDGCITTRELGTVMRSL-GQNP------TEAELRDMMSEIDRDGNGTVDFP 66
Query: 257 EFFHGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKL 315
EF + +++ D+E R+ F DKDG+G++S EL ++ +L
Sbjct: 67 EFLGMMARKMKDTDNE-------------EEIREAFRVFDKDGNGFVSAAELRHVMTRL 112
Score = 32.3 bits (72), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 12/104 (11%)
Query: 161 METHDKNKDGFVSFAEYEPPTW--VRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTE 218
M D++ +G V F E+ ++++DN E F D DG+G ++ E
Sbjct: 52 MSEIDRDGNGTVDFPEFLGMMARKMKDTDNEE-------EIREAFRVFDKDGNGFVSAAE 104
Query: 219 FNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGL 262
H KL E +R D+D DG+VN++EF L
Sbjct: 105 LR---HVMTRLGEKLSDEEVDEMIRAADTDGDGQVNYEEFVRVL 145
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 49/112 (43%), Gaps = 24/112 (21%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEE----VRERDSDRDGKVNFK 256
E F D DGDG + + E + D +NP ++EE + E D+D +G + F
Sbjct: 14 EAFGLFDKDGDGCITVEELATVIRSLD-QNP------TEEELQDMISEVDADGNGTIEFD 66
Query: 257 EFFHGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVEL 308
EF + V++ D E ++ F DKD +GY+S EL
Sbjct: 67 EFLSLMAKKVKDTDAE-------------EELKEAFKVFDKDQNGYISASEL 105
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 56/133 (42%), Gaps = 40/133 (30%)
Query: 165 DKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEF----- 219
DK+ DG ++ E T +R+ D N ++ ++ + DADG+G + EF
Sbjct: 20 DKDGDGCITVEEL--ATVIRSLDQNPTEEEL----QDMISEVDADGNGTIEFDEFLSLMA 73
Query: 220 -----------------------NDFLHPADTKNPKLILW--LSKEEV----RERDSDRD 250
N ++ ++ ++ + L L+ EEV +E D D D
Sbjct: 74 KKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGD 133
Query: 251 GKVNFKEFFHGLF 263
G+VN++EF +
Sbjct: 134 GQVNYEEFVKMMM 146
Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Query: 289 RQLFGQLDKDGDGYLSDVELLPIIGKL--HPSE 319
++ FG DKDGDG ++ EL +I L +P+E
Sbjct: 13 KEAFGLFDKDGDGCITVEELATVIRSLDQNPTE 45
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 16/115 (13%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 15 EAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLT 71
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKL 315
+ +++ D E R+ F DKDG+G++S EL ++ L
Sbjct: 72 MMARKMKDTDSE-------------EEIREAFRVFDKDGNGFISAAELRHVMTNL 113
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEF 258
E F D DG+G ++ E H KL E +RE D D DG+VN++EF
Sbjct: 88 EAFRVFDKDGNGFISAAELR---HVMTNLGEKLTDEEVDEMIRESDIDGDGQVNYEEF 142
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 16/115 (13%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 15 EAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAEL--QDMINEVDADGNGTIDFPEFLT 71
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKL 315
+ +++ D E R+ F DKDG+G++S EL ++ L
Sbjct: 72 MMARKMKDTDSE-------------EEIREAFRVFDKDGNGFISAAELRHVMTNL 113
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEF 258
E F D DG+G ++ E H KL E +RE D D DG+VN++EF
Sbjct: 88 EAFRVFDKDGNGFISAAELR---HVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 142
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 16/115 (13%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLT 70
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKL 315
+ +++ D E R+ F DKDG+G++S EL ++ L
Sbjct: 71 MMARKMKDTDSE-------------EEIREAFRVFDKDGNGFISAAELRHVMTNL 112
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEF 258
E F D DG+G ++ E H KL E +RE D D DG+VN++EF
Sbjct: 87 EAFRVFDKDGNGFISAAELR---HVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 141
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 16/115 (13%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLT 70
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKL 315
+ +++ D E R+ F DKDG+G++S EL ++ L
Sbjct: 71 MMARKMKDTDSE-------------EEIREAFRVFDKDGNGFISAAELRHVMTNL 112
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEF 258
E F D DG+G ++ E H KL E +RE D D DG+VN++EF
Sbjct: 87 EAFRVFDKDGNGFISAAELR---HVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 141
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 16/115 (13%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 15 EAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLT 71
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKL 315
+ +++ D E R+ F DKDG+G++S EL ++ L
Sbjct: 72 MMARKMKDTDSE-------------EEIREAFRVFDKDGNGFISAAELRHVMTNL 113
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEF 258
E F D DG+G ++ E H KL E +RE D D DG+VN++EF
Sbjct: 88 EAFRVFDKDGNGFISAAELR---HVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 142
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 18/115 (15%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAEL--QDMINEVDADGNGTIDFPEFLT 70
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKL 315
+ +++ ++E R+ F DKDG+G++S EL ++ L
Sbjct: 71 MMARKMKDSEEE---------------IREAFRVFDKDGNGFISAAELRHVMTNL 110
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEF 258
E F D DG+G ++ E H KL E +RE D D DG+VN++EF
Sbjct: 85 EAFRVFDKDGNGFISAAELR---HVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 139
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 66/164 (40%), Gaps = 20/164 (12%)
Query: 117 TDRLVLLFPKIDVNPADGYINEDELTDWN---MQQAERDVMHRTQREMETHDKNKDGFVS 173
T +L +F K+D N DG ++ DEL M+ D Q E T + D +
Sbjct: 330 TKQLTEIFRKLDTNN-DGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMP 388
Query: 174 FAEYEPPTWVRNSDNNSFGYDMGWW-----KEEHFNASDADGDGLLNLTEFNDFLHPADT 228
+ + + S+ + D E F D DG G ++ E AD+
Sbjct: 389 LLDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKISTKELFKLFSQADS 448
Query: 229 KNPKLILWLSKEE----VRERDSDRDGKVNFKEFFHGLFDLVRN 268
+ EE + + D+++DG+V+F EF L + VRN
Sbjct: 449 S-------IQMEELESIIEQVDNNKDGEVDFNEFVEMLQNFVRN 485
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF +
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLN 70
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKL 315
+ +++ D E ++ F DKDG+G++S EL ++ L
Sbjct: 71 LMARKMKDTDSE-------------EKLKEAFRVFDKDGNGFISAAELRHVMTNL 112
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F D DG+G ++ E H KL E +RE D D DG+VN++EF
Sbjct: 87 EAFRVFDKDGNGFISAAELR---HVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQ 143
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 25/164 (15%)
Query: 117 TDRLVLLFPKIDVNPADGYINEDELT------------DWNMQQAERDVMHRTQREMETH 164
T L +F K+D N DG ++ EL D +M A V H + ++
Sbjct: 334 TKELTAIFHKMDKN-GDGQLDRAELIEGYKELMRMKGQDASMLDASA-VEHEVDQVLDAV 391
Query: 165 DKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLH 224
D +K+G++ ++E+ R + + E F D+D G ++ TE
Sbjct: 392 DFDKNGYIEYSEFVTVAMDRKTLLSR------ERLERAFRMFDSDNSGKISSTELATIFG 445
Query: 225 PADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDLVRN 268
+D + W K + E D + DG+V+F EF L L N
Sbjct: 446 VSDVDSET---W--KSVLSEVDKNNDGEVDFDEFQQMLLKLCGN 484
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF +
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLN 70
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKL 315
+ +++ D E ++ F DKDG+G++S EL ++ L
Sbjct: 71 LMARKMKDTDSE-------------EELKEAFRVFDKDGNGFISAAELRHVMTNL 112
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F D DG+G ++ E H KL E +RE D D DG+VN++EF
Sbjct: 87 EAFRVFDKDGNGFISAAELR---HVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQ 143
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 25/164 (15%)
Query: 117 TDRLVLLFPKIDVNPADGYINEDELT------------DWNMQQAERDVMHRTQREMETH 164
T L +F K+D N DG ++ EL D +M A V H + ++
Sbjct: 357 TKELTAIFHKMDKN-GDGQLDRAELIEGYKELMRMKGQDASMLDASA-VEHEVDQVLDAV 414
Query: 165 DKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLH 224
D +K+G++ ++E+ R + + E F D+D G ++ TE
Sbjct: 415 DFDKNGYIEYSEFVTVAMDRKTLLSR------ERLERAFRMFDSDNSGKISSTELATIFG 468
Query: 225 PADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDLVRN 268
+D + W K + E D + DG+V+F EF L L N
Sbjct: 469 VSDVDSET---W--KSVLSEVDKNNDGEVDFDEFQQMLLKLCGN 507
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 25/164 (15%)
Query: 117 TDRLVLLFPKIDVNPADGYINEDELT------------DWNMQQAERDVMHRTQREMETH 164
T L +F K+D N DG ++ EL D +M A V H + ++
Sbjct: 358 TKELTAIFHKMDKN-GDGQLDRAELIEGYKELMRMKGQDASMLDASA-VEHEVDQVLDAV 415
Query: 165 DKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLH 224
D +K+G++ ++E+ R + + E F D+D G ++ TE
Sbjct: 416 DFDKNGYIEYSEFVTVAMDRKTLLSR------ERLERAFRMFDSDNSGKISSTELATIFG 469
Query: 225 PADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDLVRN 268
+D + W K + E D + DG+V+F EF L L N
Sbjct: 470 VSDVDSET---W--KSVLSEVDKNNDGEVDFDEFQQMLLKLCGN 508
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 35.8 bits (81), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF +
Sbjct: 11 EAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLN 67
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKL 315
+ +++ D E ++ F DKDG+G++S EL ++ L
Sbjct: 68 LMARKMKDTDSE-------------EELKEAFRVFDKDGNGFISAAELRHVMTNL 109
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F D DG+G ++ E H KL E +RE D D DG+VN++EF
Sbjct: 84 EAFRVFDKDGNGFISAAELR---HVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQ 140
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 13/105 (12%)
Query: 163 THDKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDF 222
T D NKDGFV F E+ + + + W+ F DADG+G ++ E D
Sbjct: 65 TFDTNKDGFVDFLEFIAAVNLIMQE--KMEQKLKWY----FKLYDADGNGSIDKNELLDM 118
Query: 223 LHPADTKNPKLILWLSKEE-----VRERDSDRDGKVNFKEFFHGL 262
N + LS EE + D + DG++ +EF +G+
Sbjct: 119 FMAVQALNGQQT--LSPEEFINLVFHKIDINNDGELTLEEFINGM 161
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 45/108 (41%), Gaps = 16/108 (14%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E +NP ++ + E D+D +G ++F EF
Sbjct: 15 EAFSLFDKDGDGTITTKELGTVXRSL-GQNPTEAEL--QDXINEVDADGNGTIDFPEFLT 71
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVEL 308
++ D E R+ F DKDG+GY+S EL
Sbjct: 72 XXARKXKDTDSE-------------EEIREAFRVFDKDGNGYISAAEL 106
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 48/129 (37%), Gaps = 8/129 (6%)
Query: 132 ADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSF 191
DG I EL + Q + D + +G + F E+ + D +S
Sbjct: 24 GDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEFLTXXARKXKDTDS- 82
Query: 192 GYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDG 251
E F D DG+G ++ E H KL + +RE D D DG
Sbjct: 83 ----EEEIREAFRVFDKDGNGYISAAELR---HVXTNLGEKLTDEEVDQXIREADIDGDG 135
Query: 252 KVNFKEFFH 260
+VN++EF
Sbjct: 136 QVNYEEFVQ 144
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 45/108 (41%), Gaps = 16/108 (14%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E +NP ++ + E D+D +G ++F EF
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVXRSL-GQNPTEAEL--QDXINEVDADGNGTIDFPEFLT 70
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVEL 308
++ D E R+ F DKDG+GY+S EL
Sbjct: 71 XXARKXKDTDSE-------------EEIREAFRVFDKDGNGYISAAEL 105
Score = 34.7 bits (78), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 48/129 (37%), Gaps = 8/129 (6%)
Query: 132 ADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSF 191
DG I EL + Q + D + +G + F E+ + D +S
Sbjct: 23 GDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEFLTXXARKXKDTDS- 81
Query: 192 GYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDG 251
E F D DG+G ++ E H KL E +RE D D DG
Sbjct: 82 ----EEEIREAFRVFDKDGNGYISAAELR---HVXTNLGEKLTDEEVDEXIREADIDGDG 134
Query: 252 KVNFKEFFH 260
+VN++EF
Sbjct: 135 QVNYEEFVQ 143
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 34.7 bits (78), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 14/71 (19%)
Query: 246 DSDRDGKVNFKEFFHGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSD 305
D ++DG++ F EF L S S T+D R F D D DGY++
Sbjct: 73 DENKDGRIEFSEFIQAL--------------SVTSRGTLDEKLRWAFKLYDLDNDGYITR 118
Query: 306 VELLPIIGKLH 316
E+L I+ ++
Sbjct: 119 NEMLDIVDAIY 129
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 34.7 bits (78), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F D DG+G ++ E H KL E +RE D D DG+VN++EF
Sbjct: 33 EAFRVEDKDGNGYISAAELR---HVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 89
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 34.3 bits (77), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 14/74 (18%)
Query: 243 RERDSDRDGKVNFKEFFHGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGY 302
R D++ DG ++F+EF L S S ++ + F D DG+GY
Sbjct: 70 RTFDANGDGTIDFREFIIAL--------------SVTSRGKLEQKLKWAFSMYDLDGNGY 115
Query: 303 LSDVELLPIIGKLH 316
+S E+L I+ ++
Sbjct: 116 ISKAEMLEIVQAIY 129
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 17/109 (15%)
Query: 163 THDKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDF 222
T D N DG + F E+ V + + W F+ D DG+G ++ E +
Sbjct: 71 TFDANGDGTIDFREFIIALSV--TSRGKLEQKLKW----AFSMYDLDGNGYISKAEMLEI 124
Query: 223 LHPADTKNPKLILWLSKEE----------VRERDSDRDGKVNFKEFFHG 261
+ A K ++ + ++E R+ D++RDGK++ +EF G
Sbjct: 125 VQ-AIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRG 172
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F D DG+G ++ E H KL E +RE D D DG+VN++EF
Sbjct: 9 EAFRVFDKDGNGYISAAELR---HVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 65
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F D DG+G ++ E H KL E +RE D D DG+VN++EF
Sbjct: 6 EAFRVFDKDGNGYISAAELR---HVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 62
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F D DG+G ++ E H KL E +RE D D DG+VN++EF
Sbjct: 9 EAFRVFDKDGNGYISAAELR---HVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 65
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 47/112 (41%), Gaps = 20/112 (17%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
+ F D D G L++ EF P +NP L + + D+D +G+V+FKEF
Sbjct: 25 KRFKKLDLDNSGSLSVEEFMSL--PELQQNP-----LVQRVIDIFDTDGNGEVDFKEFIE 77
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPII 312
G+ D E R F D D DGY+S+ EL ++
Sbjct: 78 GVSQFSVKGDKE-------------QKLRFAFRIYDMDKDGYISNGELFQVL 116
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F D DG+G ++ E H KL E +RE D D DG+VN++EF
Sbjct: 10 EAFRVFDKDGNGYISAAELR---HVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 66
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F D DG+G ++ E H KL E +RE D D DG+VN++EF
Sbjct: 12 EAFRVFDKDGNGYISAAELR---HVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 68
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F D DG+G ++ E H KL E +RE D D DG+VN++EF
Sbjct: 13 EAFRVFDKDGNGYISAAELR---HVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 69
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 47/112 (41%), Gaps = 20/112 (17%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
+ F D D G L++ EF P +NP L + + D+D +G+V+FKEF
Sbjct: 24 KRFKKLDLDNSGSLSVEEFMSL--PELQQNP-----LVQRVIDIFDTDGNGEVDFKEFIE 76
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPII 312
G+ D E R F D D DGY+S+ EL ++
Sbjct: 77 GVSQFSVKGDKE-------------QKLRFAFRIYDMDKDGYISNGELFQVL 115
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 51/115 (44%), Gaps = 16/115 (13%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF +
Sbjct: 15 EAFSLFDKDGDGCITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLN 71
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKL 315
+ +++ D E ++ F DKD +G++S EL ++ L
Sbjct: 72 LMARKMKDTDSE-------------EELKEAFRVFDKDQNGFISAAELRHVMTNL 113
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 54/128 (42%), Gaps = 40/128 (31%)
Query: 165 DKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEF----- 219
DK+ DG ++ E T +R+ N ++ ++ N DADG+G ++ EF
Sbjct: 21 DKDGDGCITTKEL--GTVMRSLGQNPTEAEL----QDMINEVDADGNGTIDFPEFLNLMA 74
Query: 220 -----------------------NDFLHPADTKNPKLILW--LSKEEV----RERDSDRD 250
N F+ A+ ++ L L+ EEV RE D D D
Sbjct: 75 RKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGD 134
Query: 251 GKVNFKEF 258
G++N++EF
Sbjct: 135 GQINYEEF 142
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 51/115 (44%), Gaps = 16/115 (13%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF +
Sbjct: 15 EAFSLFDKDGDGCITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLN 71
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKL 315
+ +++ D E ++ F DKD +G++S EL ++ L
Sbjct: 72 LMARKMKDTDSE-------------EELKEAFRVFDKDQNGFISAAELRHVMTNL 113
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 53/128 (41%), Gaps = 40/128 (31%)
Query: 165 DKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEF----- 219
DK+ DG ++ E T +R+ N ++ ++ N DADG+G ++ EF
Sbjct: 21 DKDGDGCITTKEL--GTVMRSLGQNPTEAEL----QDMINEVDADGNGTIDFPEFLNLMA 74
Query: 220 -----------------------NDFLHPADTKNPKLILW--LSKEEV----RERDSDRD 250
N F+ A+ ++ L L+ EEV RE D D D
Sbjct: 75 RKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGD 134
Query: 251 GKVNFKEF 258
G++N+ EF
Sbjct: 135 GQINYDEF 142
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 13/109 (11%)
Query: 203 FNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGL 262
F+ DADG G +++ E + K L EEV D D G ++F+EF L
Sbjct: 23 FDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEV---DEDGSGTIDFEEF---L 76
Query: 263 FDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPI 311
+VR ++ S +LF D++ DGY+ EL I
Sbjct: 77 VMMVRQMKEDAKGKSEE-------ELAELFRIFDRNADGYIDAEELAEI 118
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 9/64 (14%)
Query: 118 DRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMET----HDKNKDGFVS 173
+ L LF D N ADGYI+ +EL + E H T E+E+ DKN DG +
Sbjct: 93 EELAELFRIFDRN-ADGYIDAEELAEIFRASGE----HVTDEEIESLMKDGDKNNDGRID 147
Query: 174 FAEY 177
F E+
Sbjct: 148 FDEF 151
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 13/74 (17%)
Query: 242 VRERDSDRDGKVNFKEFFHGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDG 301
+ E D+D +G ++F EF + +++ D E R+ F DKDG+G
Sbjct: 7 INEVDADGNGTIDFPEFLTMMARKMKDTDSE-------------EEIREAFRVFDKDGNG 53
Query: 302 YLSDVELLPIIGKL 315
Y+S EL ++ L
Sbjct: 54 YISAAELRHVMTNL 67
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFF 259
E F D DG+GL++ E H KL E +RE D D DG +N++EF
Sbjct: 12 EAFKVFDRDGNGLISAAELR---HVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFV 67
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 20/112 (17%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
+ F D D G L++ EF P +NP L + + D+D +G+V+FKEF
Sbjct: 11 KRFKKLDLDNSGSLSVEEFMSL--PELQQNP-----LVQRVIDIFDTDGNGEVDFKEFIE 63
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPII 312
G+ S + R F D D DGY+S+ EL ++
Sbjct: 64 GV-------------SQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVL 102
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 11/60 (18%)
Query: 203 FNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEE----VRERDSDRDGKVNFKEF 258
F A D DGDG + + E + A P L +EE +RE D D+DG+VN++EF
Sbjct: 12 FRAFDQDGDGHITVDELRRAM--AGLGQP-----LPQEELDAMIREADVDQDGRVNYEEF 64
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 20/112 (17%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
+ F D D G L++ EF P +NP L + + D+D +G+V+FKEF
Sbjct: 10 KRFKKLDLDNSGSLSVEEFMSL--PELQQNP-----LVQRVIDIFDTDGNGEVDFKEFIE 62
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPII 312
G+ S + R F D D DGY+S+ EL ++
Sbjct: 63 GV-------------SQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVL 101
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 24/112 (21%)
Query: 207 DADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRER----DSDRDGKVNFKEFFHGL 262
D +G G +N F DFL K+ +KEE+ + D D GK++FK
Sbjct: 52 DKEGTGKMN---FGDFLTVM---TQKMSEKDTKEEILKAFKLFDDDETGKISFK------ 99
Query: 263 FDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGK 314
+L R + G N + D +++ + D+DGDG +S+ E L I+ K
Sbjct: 100 -NLKRVAKELGENLT-------DEELQEMIDEADRDGDGEVSEQEFLRIMKK 143
>pdb|1YX7|A Chain A, Nmr Structure Of Calsensin, Energy Minimized Average
Structure.
pdb|1YX8|A Chain A, Nmr Structure Of Calsensin, 20 Low Energy Structures
Length = 83
Score = 32.7 bits (73), Expect = 0.32, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 13/75 (17%)
Query: 200 EEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRE--------RDSDRDG 251
E F DA+GDG + E F+ D LSK++V+E D + DG
Sbjct: 10 EAAFKKLDANGDGYVTALELQTFMVTLDAYKA-----LSKDKVKEASAKLIKMADKNSDG 64
Query: 252 KVNFKEFFHGLFDLV 266
K++ +EF + +L+
Sbjct: 65 KISKEEFLNANAELL 79
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 65/163 (39%), Gaps = 23/163 (14%)
Query: 117 TDRLVLLFPKIDVNPADGYINEDELTDW-------NMQQAE----RDVMHRTQREMETHD 165
T L +F K D N DG ++ EL + Q A V H + ++ D
Sbjct: 334 TKELTAIFHKXDKN-GDGQLDRAELIEGYKELXRXKGQDASXLDASAVEHEVDQVLDAVD 392
Query: 166 KNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHP 225
+K+G++ ++E+ R + + E F D+D G ++ TE
Sbjct: 393 FDKNGYIEYSEFVTVAXDRKTLLSR------ERLERAFRXFDSDNSGKISSTELATIFGV 446
Query: 226 ADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDLVRN 268
+D + W K + E D + DG+V+F EF L L N
Sbjct: 447 SDVDSET---W--KSVLSEVDKNNDGEVDFDEFQQXLLKLCGN 484
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEF 258
E F D DG+GL++ E H KL E +RE D D DG +N++EF
Sbjct: 87 EAFKVFDRDGNGLISAAELR---HVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEF 141
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 51/115 (44%), Gaps = 16/115 (13%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 14 EAFALFDKDGDGTITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLS 70
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKL 315
+ ++ D E ++ ++A F D+DG+G +S EL ++ L
Sbjct: 71 LMARKMKEQDSE--------EELIEA-----FKVFDRDGNGLISAAELRHVMTNL 112
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEF 258
E F D DG+GL++ E H KL E +RE D D DG +N++EF
Sbjct: 87 EAFKVFDRDGNGLISAAELR---HVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEF 141
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 51/115 (44%), Gaps = 16/115 (13%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 14 EAFALFDKDGDGTITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLS 70
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKL 315
+ ++ D E ++ ++A F D+DG+G +S EL ++ L
Sbjct: 71 LMARKMKEQDSE--------EELIEA-----FKVFDRDGNGLISAAELRHVMTNL 112
>pdb|2OCA|A Chain A, The Crystal Structure Of T4 Uvsw
Length = 510
Score = 32.0 bits (71), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Query: 236 WLSKEEVRERDSDRDGKVNFKEFFHG--LFDLVRNYDDEGHNSSHPSDDTMDAPARQLFG 293
W++K ++ D + V FK HG +FDL++N D+ + S +D R +
Sbjct: 335 WIAKLAIKLAQKDENAFVMFKHVSHGKAIFDLIKNEYDKVYYVS----GEVDTETRNIMK 390
Query: 294 QLDKDGDGYL 303
L ++G G +
Sbjct: 391 TLAENGKGII 400
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 31.6 bits (70), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 45/109 (41%), Gaps = 13/109 (11%)
Query: 203 FNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGL 262
F+ DADG G +++ E + K L EEV D D G ++F+EF L
Sbjct: 23 FDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEV---DEDGSGTIDFEEF---L 76
Query: 263 FDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPI 311
+VR ++ S + F D++ DGY+ EL I
Sbjct: 77 VMMVRQMKEDAKGKSEE-------ELAECFRIFDRNADGYIDAEELAEI 118
Score = 28.5 bits (62), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 8/50 (16%)
Query: 132 ADGYINEDELTDWNMQQAERDVMHRTQREMET----HDKNKDGFVSFAEY 177
ADGYI+ +EL + E H T E+E+ DKN DG + F E+
Sbjct: 106 ADGYIDAEELAEIFRASGE----HVTDEEIESLMKDGDKNNDGRIDFDEF 151
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 31.6 bits (70), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F D DG+G ++ D H KL E +RE D D DG+VN+++F
Sbjct: 11 EAFRVFDKDGNGYISAA---DLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEDFVQ 67
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 31.6 bits (70), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 20/100 (20%)
Query: 92 EEAQPEWEDFMNAEDYLNDEEKFNVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAER 151
+ ++EDF+ A L + V ++L F D+N DGYIN++E+ D + +A
Sbjct: 66 QTGSVKFEDFVTALSIL---LRGTVHEKLRWTFNLYDINK-DGYINKEEMMD--IVKAIY 119
Query: 152 DVMHR---------TQRE-----METHDKNKDGFVSFAEY 177
D+M + T R+ + DKNKDG V+ E+
Sbjct: 120 DMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEF 159
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 31.6 bits (70), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 67/162 (41%), Gaps = 24/162 (14%)
Query: 117 TDRLVLLFPKIDVNPADGYINEDELTDW--NMQQAERDVMHRTQREMET------HDKNK 168
T L +F ID N DG ++ EL D + E V Q E E D ++
Sbjct: 345 TKELTDIFRHIDKN-GDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDR 403
Query: 169 DGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDF--LHPA 226
+G++ ++E+ R S + E F D DG+G +++ E L
Sbjct: 404 NGYIDYSEFVTVAMDRKSLLSKDKL------ESAFQKFDQDGNGKISVDELASVFGLDHL 457
Query: 227 DTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDLVRN 268
++K W KE + DS+ DG V+F+EF + L N
Sbjct: 458 ESKT-----W--KEMISGIDSNNDGDVDFEEFCKMIQKLCSN 492
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 31.6 bits (70), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 20/95 (21%)
Query: 97 EWEDFMNAEDYLNDEEKFNVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVMHR 156
++EDF+ A L + V ++L F D+N DGYIN++E+ D + +A D+M +
Sbjct: 107 KFEDFVTALSIL---LRGTVHEKLRWTFNLYDINK-DGYINKEEMMD--IVKAIYDMMGK 160
Query: 157 ---------TQRE-----METHDKNKDGFVSFAEY 177
T R+ + DKNKDG V+ E+
Sbjct: 161 YTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEF 195
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 31.6 bits (70), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 20/100 (20%)
Query: 92 EEAQPEWEDFMNAEDYLNDEEKFNVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAER 151
+ ++EDF+ A L + V ++L F D+N DGYIN++E+ D + +A
Sbjct: 69 QTGSVKFEDFVTALSIL---LRGTVHEKLRWTFNLYDINK-DGYINKEEMMD--IVKAIY 122
Query: 152 DVMHR---------TQRE-----METHDKNKDGFVSFAEY 177
D+M + T R+ + DKNKDG V+ E+
Sbjct: 123 DMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEF 162
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 31.2 bits (69), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 13/67 (19%)
Query: 242 VRERDSDRDGKVNFKEFFHGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDG 301
+ E +++ +G++NF EF + +R D E R+ F D+DGDG
Sbjct: 52 IAEAENNNNGQLNFTEFCGIMAKQMRETDTE-------------EEMREAFKIFDRDGDG 98
Query: 302 YLSDVEL 308
++S EL
Sbjct: 99 FISPAEL 105
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 15/64 (23%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILW--LSKEEV----RERDSDRDGKVN 254
E F D DGDG F+ PA+ + + L ++ EE+ RE D D DG +N
Sbjct: 87 EAFKIFDRDGDG---------FISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMIN 137
Query: 255 FKEF 258
++EF
Sbjct: 138 YEEF 141
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 31.2 bits (69), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 50/116 (43%), Gaps = 16/116 (13%)
Query: 200 EEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFF 259
+E F+ D DGDG + + + +NP ++ + E +D +G ++F +F
Sbjct: 314 KEAFSLFDKDGDGGITTKQLGTVMRSLG-QNPTEAEL--QDMINEVGADGNGTIDFPQFL 370
Query: 260 HGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKL 315
+ +++ D E R+ F KDG+GY+S +L ++ L
Sbjct: 371 TMMARKMKDTDSE-------------EEIREAFRVFGKDGNGYISAAQLRHVMTNL 413
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 31.2 bits (69), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 22/141 (15%)
Query: 123 LFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQRE-METHDKNKDGFVSFAEYEPPT 181
LF ID + + G I DEL D +++ ++M ++ M+ D +K G + + E+ T
Sbjct: 15 LFKMIDTDNS-GTITFDELKD-GLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAAT 72
Query: 182 WVRNSDNNSFGYDMGWWKEEH----FNASDADGDGLLNLTEFNDFLHPADTKNPKLILWL 237
N +EE+ F+ D DG G + L E + +
Sbjct: 73 VHLNK----------LEREENLVSAFSYFDKDGSGYITLDEIQQACKDFGLDDIHI---- 118
Query: 238 SKEEVRERDSDRDGKVNFKEF 258
+ ++E D D DG++++ EF
Sbjct: 119 -DDMIKEIDQDNDGQIDYGEF 138
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 11/74 (14%)
Query: 239 KEEVRERDSDRDGKVNFKEFFHGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKD 298
+E + E D D G V+F EF L +VR+ D+ S LF DK+
Sbjct: 58 QEMIDEVDEDGSGTVDFDEF---LVMMVRSMKDDSKGKSEE-------ELSDLFRMFDKN 107
Query: 299 GDGYLSDVELLPII 312
DGY+ D+E L I+
Sbjct: 108 ADGYI-DLEELKIM 120
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 11/74 (14%)
Query: 239 KEEVRERDSDRDGKVNFKEFFHGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKD 298
+E + E D D G V+F EF + +++ D +G SD LF DK+
Sbjct: 58 QEMIDEVDEDGSGTVDFDEFLVMMVRCMKD-DSKGKTEEELSD---------LFRMFDKN 107
Query: 299 GDGYLSDVELLPII 312
DGY+ D+E L I+
Sbjct: 108 ADGYI-DLEELKIM 120
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 199 KEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEF 258
+E F DA+GDG ++ E + L + P + K + E D+D DG ++F+EF
Sbjct: 11 RERIFKRFDANGDGKISAAELGEALKTLGSITPDEV----KHMMAEIDTDGDGFISFQEF 66
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 15/76 (19%)
Query: 239 KEEVRERDSDRDGKVNFKEFFHGLFDLVRNY--DDEGHNSSHPSDDTMDAPARQLFGQLD 296
+E + E D D G V+F EF L +VR+ D +G SD LF D
Sbjct: 58 QEMIDEVDEDGSGTVDFDEF---LVMMVRSMKDDSKGKTEEELSD---------LFRMFD 105
Query: 297 KDGDGYLSDVELLPII 312
K+ DGY+ D+E L I+
Sbjct: 106 KNADGYI-DLEELKIM 120
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 67/162 (41%), Gaps = 24/162 (14%)
Query: 117 TDRLVLLFPKIDVNPADGYINEDELTDW--NMQQAERDVMHRTQREMET------HDKNK 168
T L +F ID N DG ++ EL D + E V Q E E D ++
Sbjct: 62 TKELTDIFRHIDKN-GDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDR 120
Query: 169 DGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDF--LHPA 226
+G++ ++E+ R S D E F D DG+G +++ E L
Sbjct: 121 NGYIDYSEFVTVAMDRKS---LLSKDK---LESAFQKFDQDGNGKISVDELASVFGLDHL 174
Query: 227 DTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDLVRN 268
++K W KE + DS+ DG V+F+EF + L N
Sbjct: 175 ESKT-----W--KEMISGIDSNNDGDVDFEEFCKMIQKLCSN 209
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 48/114 (42%), Gaps = 21/114 (18%)
Query: 203 FNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEE----VRERDSDRDGKVNFKEF 258
F+ DADG G ++ E + +NP +KEE + E D D G ++F+EF
Sbjct: 26 FDMFDADGGGDISTKELGTVMRML-GQNP------TKEELDAIIEEVDEDGSGTIDFEEF 78
Query: 259 FHGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPII 312
L +VR ++ S F DK+ DG++ EL I+
Sbjct: 79 ---LVMMVRQMKEDAKGKSEE-------ELEDCFRIFDKNADGFIDIEELGEIL 122
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 48/114 (42%), Gaps = 21/114 (18%)
Query: 203 FNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEE----VRERDSDRDGKVNFKEF 258
F+ DADG G ++ E + +NP +KEE + E D D G ++F+EF
Sbjct: 26 FDMFDADGGGDISTKELGTVMRML-GQNP------TKEELDAIIEEVDEDGSGTIDFEEF 78
Query: 259 FHGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPII 312
L +VR ++ S F DK+ DG++ EL I+
Sbjct: 79 ---LVMMVRQMKEDAKGKSEE-------ELANCFRIFDKNADGFIDIEELGEIL 122
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 48/114 (42%), Gaps = 21/114 (18%)
Query: 203 FNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEE----VRERDSDRDGKVNFKEF 258
F+ DADG G ++ E + +NP +KEE + E D D G ++F+EF
Sbjct: 26 FDMFDADGGGDISTKELGTVMRML-GQNP------TKEELDAIIEEVDEDGSGTIDFEEF 78
Query: 259 FHGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPII 312
L +VR ++ S F DK+ DG++ EL I+
Sbjct: 79 ---LVMMVRQMKEDAKGKSEE-------ELANCFRIFDKNADGFIDIEELGEIL 122
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 48/114 (42%), Gaps = 21/114 (18%)
Query: 203 FNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEE----VRERDSDRDGKVNFKEF 258
F+ DADG G ++ E + +NP +KEE + E D D G ++F+EF
Sbjct: 23 FDMFDADGGGDISTKELGTVMRML-GQNP------TKEELDAIIEEVDEDGSGTIDFEEF 75
Query: 259 FHGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPII 312
L +VR ++ S F DK+ DG++ EL I+
Sbjct: 76 ---LVMMVRQMKEDAKGKSEE-------ELANCFRIFDKNADGFIDIEELGEIL 119
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 30.4 bits (67), Expect = 1.6, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 200 EEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEF 258
E F D +GDG ++L+E D L + + + + + E D+D DG ++F EF
Sbjct: 6 ERIFKRFDTNGDGKISLSELTDALRTLGSTSADEV----QRMMAEIDTDGDGFIDFNEF 60
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 14/71 (19%)
Query: 246 DSDRDGKVNFKEFFHGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSD 305
D+D +G V+F++F GL L+R E N + F D + DGY++
Sbjct: 112 DTDHNGAVSFEDFIKGLSILLRGTVQEKLNWA--------------FNLYDINKDGYITK 157
Query: 306 VELLPIIGKLH 316
E+L I+ ++
Sbjct: 158 EEMLDIMKAIY 168
Score = 28.9 bits (63), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 20/94 (21%)
Query: 98 WEDFMNAEDYLNDEEKFNVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVMHRT 157
+EDF+ L + V ++L F D+N DGYI ++E+ D + +A D+M +
Sbjct: 121 FEDFIKGLSILL---RGTVQEKLNWAFNLYDINK-DGYITKEEMLD--IMKAIYDMMGKC 174
Query: 158 ----------QREMETH----DKNKDGFVSFAEY 177
++ +ET DKNKDG V+ E+
Sbjct: 175 TYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEF 208
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 48/114 (42%), Gaps = 21/114 (18%)
Query: 203 FNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEE----VRERDSDRDGKVNFKEF 258
F+ DADG G ++ E + +NP +KEE + E D D G ++F+EF
Sbjct: 26 FDMFDADGGGDISTKELGTVMRML-GQNP------TKEELDAIIEEVDEDGSGTIDFEEF 78
Query: 259 FHGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPII 312
L +VR ++ S F DK+ DG++ EL I+
Sbjct: 79 ---LVMMVRQMKEDAKGKSEE-------ELADCFRIFDKNADGFIDIEELGEIL 122
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 48/111 (43%), Gaps = 12/111 (10%)
Query: 157 TQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNL 216
++ ET D NKDG++ F EY + + W+ F D DG+G ++
Sbjct: 54 VEQMFETFDFNKDGYIDFMEYVAALSL--VLKGKVDQKLRWY----FKLYDVDGNGCIDR 107
Query: 217 TEFNDFLHPADTKNPKLILWLSKEEVR-----ERDSDRDGKVNFKEFFHGL 262
E + + N + ++ EE + D + DG+++ +EF G+
Sbjct: 108 GELLNIIKAIRAIN-RCNEAMTAEEFTNMVFDKIDINGDGELSLEEFMEGV 157
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 20/100 (20%)
Query: 92 EEAQPEWEDFMNAEDYLNDEEKFNVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAER 151
+ ++EDF+ A L + V ++L F D+N DGYIN++E+ D + +A
Sbjct: 66 QTGSVKFEDFVTALSIL---LRGTVHEKLRWTFNLYDINK-DGYINKEEMMD--IVKAIY 119
Query: 152 DVMHR---------TQRE-----METHDKNKDGFVSFAEY 177
D+M T R+ + DKNKDG V+ E+
Sbjct: 120 DMMGAYTYPVLAEDTPRQHVDVFFQKMDKNKDGIVTLDEF 159
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 30.0 bits (66), Expect = 1.7, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 200 EEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEF 258
E F D +GDG ++L+E D L + + + + + E D+D DG ++F EF
Sbjct: 5 ERIFKRFDTNGDGKISLSELTDALRTLGSTSADEV----QRMMAEIDTDGDGFIDFNEF 59
>pdb|2PMY|A Chain A, Ef-Hand Domain Of Human Rasef
pdb|2PMY|B Chain B, Ef-Hand Domain Of Human Rasef
Length = 91
Score = 30.0 bits (66), Expect = 1.8, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 17/67 (25%)
Query: 203 FNASDADGDGLLNLTEFNDF-----LHPADTKNPKLILWLSKEEVRER-DSDRDGKVNFK 256
F A DA+ G L EF + PAD E V +R D+DRDG + F+
Sbjct: 33 FAACDANRSGRLEREEFRALCTELRVRPADA-----------EAVFQRLDADRDGAITFQ 81
Query: 257 EFFHGLF 263
EF G
Sbjct: 82 EFARGFL 88
>pdb|1BMO|A Chain A, Bm-40, FsEC DOMAIN PAIR
pdb|1BMO|B Chain B, Bm-40, FsEC DOMAIN PAIR
Length = 233
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 124 FPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWV 183
F ++D +P DGY++ EL ++ + H T R ET D + D +++ E+ +
Sbjct: 165 FGQLDQHPIDGYLSHTELAP--LRAPLIPMEHCTTRFFETCDLDNDKYIALDEWAGCFGI 222
Query: 184 RNSD 187
+ D
Sbjct: 223 KQKD 226
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 287 PARQLFGQLDKDG-DGYLSDVELLPIIGKLHPSERYYAK 324
P FGQLD+ DGYLS EL P+ L P E +
Sbjct: 160 PVHWQFGQLDQHPIDGYLSHTELAPLRAPLIPMEHCTTR 198
>pdb|1SRA|A Chain A, Structure Of A Novel Extracellular Ca2+-Binding Module In
Bm-40(Slash)sparc(Slash)osteonectin
Length = 151
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 124 FPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWV 183
F ++D +P DGY++ EL ++ + H T R ET D + D +++ E+ +
Sbjct: 83 FGQLDQHPIDGYLSHTELAP--LRAPLIPMEHCTTRFFETCDLDNDKYIALDEWAGCFGI 140
Query: 184 RNSD 187
+ D
Sbjct: 141 KQKD 144
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 287 PARQLFGQLDKDG-DGYLSDVELLPIIGKLHPSE 319
P FGQLD+ DGYLS EL P+ L P E
Sbjct: 78 PVHWQFGQLDQHPIDGYLSHTELAPLRAPLIPME 111
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEF 258
E F D D +G ++ E H KL E +RE D D DG++N++EF
Sbjct: 8 EAFRVFDKDQNGFISAAELR---HVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEF 62
>pdb|1NUB|A Chain A, Helix C Deletion Mutant Of Bm-40 Fs-Ec Domain Pair
pdb|1NUB|B Chain B, Helix C Deletion Mutant Of Bm-40 Fs-Ec Domain Pair
Length = 229
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 124 FPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWV 183
F ++D +P DGY++ EL ++ + H T R ET D + D +++ E+ +
Sbjct: 161 FGQLDQHPIDGYLSHTELAP--LRAPLIPMEHCTTRFFETCDLDNDKYIALDEWAGCFGI 218
Query: 184 RNSD 187
+ D
Sbjct: 219 KQKD 222
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 287 PARQLFGQLDKDG-DGYLSDVELLPIIGKLHPSERYYAK 324
P FGQLD+ DGYLS EL P+ L P E +
Sbjct: 156 PVHWQFGQLDQHPIDGYLSHTELAPLRAPLIPMEHCTTR 194
>pdb|2BWM|A Chain A, 1.8a Crystal Structure Of Of Psathyrella Velutina Lectin
In Complex With Methyl
2-Acetamido-1,2-Dideoxy-1-Seleno-Beta- D-Glucopyranoside
pdb|2BWR|A Chain A, Crystal Structure Of Psathyrella Velutina Lectin At 1.5a
Resolution
pdb|2BWR|B Chain B, Crystal Structure Of Psathyrella Velutina Lectin At 1.5a
Resolution
pdb|2C25|A Chain A, 1.8a Crystal Structure Of Psathyrella Velutina Lectin In
Complex With N-Acetylneuraminic Acid
pdb|2C25|B Chain B, 1.8a Crystal Structure Of Psathyrella Velutina Lectin In
Complex With N-Acetylneuraminic Acid
pdb|2C4D|A Chain A, 2.6a Crystal Structure Of Psathyrella Velutina Lectin In
Complex With N-Acetylglucosamine
Length = 401
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 189 NSFGYDMGWWKEEHFN-ASDADGDGLLNLTEFND 221
N+FGY GW + H +D GDGLL++ F +
Sbjct: 158 NNFGYAQGWRLDRHLRFLADVTGDGLLDVVGFGE 191
>pdb|2V53|A Chain A, Crystal Structure Of A Sparc-Collagen Complex
Length = 230
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 124 FPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWV 183
F ++D +P DGY++ EL ++ + H T R ET D + D +++ E+ +
Sbjct: 162 FGQLDQHPIDGYLSHTELAP--LRAPLIPMEHCTTRFFETCDLDNDKYIALDEWAGCFGI 219
Query: 184 RNSD 187
+ D
Sbjct: 220 KQKD 223
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 287 PARQLFGQLDKDG-DGYLSDVELLPIIGKLHPSERYYAK 324
P FGQLD+ DGYLS EL P+ L P E +
Sbjct: 157 PVHWQFGQLDQHPIDGYLSHTELAPLRAPLIPMEHCTTR 195
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 65/144 (45%), Gaps = 22/144 (15%)
Query: 123 LFPKIDVNPADGYINEDELTDWNMQQAERDV---MHRTQREMETHDKNKDGFVSFAEYEP 179
+F +DV+ + G ++ E+ D + + + +H+ R++ D N G + + ++
Sbjct: 62 IFIALDVDNS-GTLSSQEILDGLKKIGYQKIPPDIHQVLRDI---DSNASGQIHYTDFLA 117
Query: 180 PTWVRNSDNNSFGYDMGWWKEEH----FNASDADGDGLLNLTEFNDFLHPADTKNPKLIL 235
T + + + K+E F D DG+G +++ E D +NP LI
Sbjct: 118 ATIDKQT----------YLKKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENP-LID 166
Query: 236 WLSKEEVRERDSDRDGKVNFKEFF 259
++E D + DG+++F EF
Sbjct: 167 KAIDSLLQEVDLNGDGEIDFHEFM 190
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 11/110 (10%)
Query: 198 WKEEHFNASDADGDGLLNLTEFNDFLHPADTK--NPKLILWLSKEEVRERDSDRDGKVNF 255
+ E FN DAD +G ++ EF L N KLI W + D D +G +++
Sbjct: 64 FAEYVFNVFDADKNGYIDFKEFICALSVTSRGELNDKLI-W----AFQLYDLDNNGLISY 118
Query: 256 KEFFHGLFDLVRNYDDEGHNSSHPSD-DTMDAPARQLFGQLDKDGDGYLS 304
E + D + Y G P D DT + ++F +DK+ DG L+
Sbjct: 119 DEMLR-IVDAI--YKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLT 165
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 29.6 bits (65), Expect = 2.5, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Query: 108 LNDEEKFNVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKN 167
+ D+ K + L LF D N ADGYI+ +EL E + M+ DKN
Sbjct: 5 MKDDSKGKTEEELSDLFRMFDKN-ADGYIDLEELKIMLQATGETITEDDIEELMKDGDKN 63
Query: 168 KDGFVSFAEY 177
DG + + E+
Sbjct: 64 NDGRIDYDEF 73
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 11/74 (14%)
Query: 239 KEEVRERDSDRDGKVNFKEFFHGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKD 298
+E + E D D G V+F EF L +VR+ D+ S LF DK+
Sbjct: 58 QEMIDEVDEDGSGTVDFDEF---LVMMVRSMKDDSKGKSEE-------ELSDLFRMFDKN 107
Query: 299 GDGYLSDVELLPII 312
DGY+ D++ L I+
Sbjct: 108 ADGYI-DLDELKIM 120
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 11/74 (14%)
Query: 239 KEEVRERDSDRDGKVNFKEFFHGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKD 298
+E + E D D G V+F EF L +VR+ D+ S LF DK+
Sbjct: 58 QEMIDEVDEDGSGTVDFDEF---LVMMVRSMKDDSKGKSEE-------ELSDLFRMFDKN 107
Query: 299 GDGYLSDVELLPII 312
DGY+ D++ L I+
Sbjct: 108 ADGYI-DLDELKIM 120
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 29.3 bits (64), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 50/112 (44%), Gaps = 24/112 (21%)
Query: 207 DADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEV----RERDSDRDGKVNFKEFFHGL 262
D DG G ++ EF + K+ S+EE+ R D D GK++FK
Sbjct: 54 DKDGSGTIDFEEFLQMM------TAKMGERDSREEIMKAFRLFDDDETGKISFK------ 101
Query: 263 FDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGK 314
+L R + G N + D +++ + D+DGDG +++ E I+ K
Sbjct: 102 -NLKRVAKELGENMT-------DEELQEMIDEADRDGDGEVNEEEFFRIMKK 145
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 28.9 bits (63), Expect = 4.4, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 11/64 (17%)
Query: 200 EEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEE----VRERDSDRDGKVNF 255
+E F D DGDG + + E + D +NP ++EE + E D+D +G + F
Sbjct: 13 KEAFGLFDKDGDGCITVEELATVIRSLD-QNP------TEEELQDMISEVDADGNGTIEF 65
Query: 256 KEFF 259
EF
Sbjct: 66 DEFL 69
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 28.9 bits (63), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 43/109 (39%), Gaps = 18/109 (16%)
Query: 200 EEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFF 259
+E F D D DG +++ E L L K + G++N KEF
Sbjct: 8 QECFQIFDKDNDGKVSIEELGSALRS-----------LGKNPTNAELNTIKGQLNAKEFD 56
Query: 260 HGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVEL 308
F V Y + S + +DA F LDK+G+G + + EL
Sbjct: 57 LATFKTV--YRKPIKTPTEQSKEMLDA-----FRALDKEGNGTIQEAEL 98
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 28.5 bits (62), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 11/74 (14%)
Query: 239 KEEVRERDSDRDGKVNFKEFFHGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKD 298
+E + E D D G V+F EF L +VR+ D+ S LF DK+
Sbjct: 58 QEMIDEVDEDGSGTVDFDEF---LVMMVRSMKDDSKGKSEE-------ELSDLFRMXDKN 107
Query: 299 GDGYLSDVELLPII 312
DGY+ D++ L I+
Sbjct: 108 ADGYI-DLDELKIM 120
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 28.5 bits (62), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 59/152 (38%), Gaps = 36/152 (23%)
Query: 165 DKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLH 224
D N DG VS+ E + + N + F A D DG+G ++L EF F
Sbjct: 10 DANGDGSVSYEEVKAFVSSKRPIKNE------QLLQLIFKAIDIDGNGEIDLAEFTKFAA 63
Query: 225 PADTKNPKLILWLSKEEV------RERDSDRDGKVNFKEFFHGLFDLVRNYDDEGHNSSH 278
++ LS E+V + D+D DGK+ +E + + G+
Sbjct: 64 AVKEQD------LSDEKVGLKILYKLMDADGDGKLTKEE-------VTTFFKKFGYE--K 108
Query: 279 PSDDTMDAPARQLFGQLDKDGDGYLSDVELLP 310
D M A D +GDGY++ E L
Sbjct: 109 VVDQIMKA---------DANGDGYITLEEFLA 131
>pdb|2SAS|A Chain A, Structure Of A Sarcoplasmic Calcium-Binding Protein From
Amphioxus Refined At 2.4 Angstroms Resolution
Length = 185
Score = 28.5 bits (62), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Query: 165 DKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEH----FNASDADGDGLLNLTEFN 220
D NKD VS+ EY W + D+ W + F D GDG+++L EF
Sbjct: 70 DINKDDVVSWEEY-LAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQ 128
Query: 221 DFL 223
++
Sbjct: 129 NYC 131
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 28.5 bits (62), Expect = 5.2, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 200 EEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFF 259
+E F+ D DGDG + E + + L ++ + E D+D DG ++F EF
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL---QDMINEVDADGDGTIDFPEFL 69
>pdb|4AGS|A Chain A, Leishmania Tdr1 - A Unique Trimeric Glutathione
Transferase
pdb|4AGS|B Chain B, Leishmania Tdr1 - A Unique Trimeric Glutathione
Transferase
pdb|4AGS|C Chain C, Leishmania Tdr1 - A Unique Trimeric Glutathione
Transferase
Length = 471
Score = 28.5 bits (62), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 288 ARQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYA 323
A Q G DG+ +DV L+P + +L P+ YYA
Sbjct: 163 ANQTTGPYYCDGEFTXADVALVPFLVRLKPALXYYA 198
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 28.5 bits (62), Expect = 5.8, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 11/64 (17%)
Query: 200 EEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEE----VRERDSDRDGKVNF 255
+E F D DGDG + + E + D +NP ++EE + E D+D +G + F
Sbjct: 13 KEAFGLFDKDGDGCITVEELATVIRSLD-QNP------TEEELQDMISEVDADGNGTIEF 65
Query: 256 KEFF 259
EF
Sbjct: 66 DEFL 69
>pdb|3AKB|A Chain A, Structural Basis For Prokaryotic Calcium-Mediated
Regulation By A Streptomyces Coelicolor Calcium-Binding
Protein
Length = 166
Score = 28.5 bits (62), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 288 ARQLFGQLDKDGDGYLSDVELLPIIGK 314
ARQ LD DGDG + + E++P +
Sbjct: 134 ARQAAAALDTDGDGKVGETEIVPAFAR 160
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 28.1 bits (61), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 59/148 (39%), Gaps = 30/148 (20%)
Query: 165 DKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDF-- 222
D N DG VS+ E + + + N + F + DADG+G ++ EF F
Sbjct: 10 DVNGDGAVSYEEVKAFVSKKRAIKNE------QLLQLIFKSIDADGNGEIDQNEFAKFYG 63
Query: 223 -LHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDLVRNYDDEGHNSSHPSD 281
+ D + K+ L K + D D DGK+ KE F + H ++
Sbjct: 64 SIQGQDLSDDKIGL---KVLYKLMDVDGDGKLT-KEEVTSFF--------KKHGIEKVAE 111
Query: 282 DTMDAPARQLFGQLDKDGDGYLSDVELL 309
M A D +GDGY++ E L
Sbjct: 112 QVMKA---------DANGDGYITLEEFL 130
>pdb|3AKA|A Chain A, Structural Basis For Prokaryotic Calcium-Mediated
Regulation By A Streptomyces Coelicolor Calcium-Binding
Protein
Length = 166
Score = 28.1 bits (61), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 288 ARQLFGQLDKDGDGYLSDVELLPIIGK 314
ARQ LD DGDG + + E++P +
Sbjct: 134 ARQAAAALDTDGDGKVGETEIVPAFAR 160
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 28.1 bits (61), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 123 LFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEY 177
LF D N ADGYI+ DEL E + M+ DKN DG + + E+
Sbjct: 11 LFRMFDKN-ADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 64
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 28.1 bits (61), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 59/148 (39%), Gaps = 30/148 (20%)
Query: 165 DKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDF-- 222
D N DG VS+ E + + + N + F + DADG+G ++ EF F
Sbjct: 10 DVNGDGAVSYEEVKAFVSKKRAIKNE------QLLQLIFKSIDADGNGEIDQNEFAKFYG 63
Query: 223 -LHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDLVRNYDDEGHNSSHPSD 281
+ D + K+ L K + D D DGK+ KE F + H ++
Sbjct: 64 SIQGQDLSDDKIGL---KVLYKLMDVDGDGKLT-KEEVTSFF--------KKHGIEKVAE 111
Query: 282 DTMDAPARQLFGQLDKDGDGYLSDVELL 309
M A D +GDGY++ E L
Sbjct: 112 QVMKA---------DANGDGYITLEEFL 130
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 28.1 bits (61), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F D D +G ++ +E H KL ++ ++E D D DG+VN++EF
Sbjct: 8 EAFKVFDKDQNGYISASELR---HVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVK 64
Query: 261 GLF 263
+
Sbjct: 65 MMM 67
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 28.1 bits (61), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 11/74 (14%)
Query: 239 KEEVRERDSDRDGKVNFKEFFHGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKD 298
+E + E D D G V+F EF L +VR+ D+ S LF DK+
Sbjct: 58 QEMIDEVDEDGSGTVDFDEF---LVMMVRSMKDDSKGKSEE-------ELSDLFRMWDKN 107
Query: 299 GDGYLSDVELLPII 312
DGY+ D++ L I+
Sbjct: 108 ADGYI-DLDELKIM 120
>pdb|2O3E|A Chain A, Crystal Structure Of Engineered Neurolysin With Thimet
Oligopeptidase Specificity For Neurotensin Cleavage Site
Length = 678
Score = 28.1 bits (61), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 38/99 (38%), Gaps = 2/99 (2%)
Query: 156 RTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLN 215
R + EM H + K + + P +R GY+ N + +
Sbjct: 238 RRKMEMAFHTRCKQENTAILQQLLP--LRAQVAKLLGYNTHADFVLELNTAKSTSRVAAF 295
Query: 216 LTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVN 254
L + + L P + IL L K+E ER + DGK+N
Sbjct: 296 LDDLSQKLKPLGEAEREFILSLKKKECEERGFEYDGKIN 334
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 28.1 bits (61), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F D D +G ++ +E H KL ++ ++E D D DG+VN++EF
Sbjct: 13 EAFKVFDKDQNGYISASELR---HVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVK 69
Query: 261 GLFDL 265
+ +
Sbjct: 70 MMMTV 74
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 27.7 bits (60), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 49/112 (43%), Gaps = 24/112 (21%)
Query: 207 DADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRER----DSDRDGKVNFKEFFHGL 262
D +G G N F DFL K + +KEE+ + D D GK++FK
Sbjct: 77 DKEGTGKXN---FGDFLTVXTQKXSE---KDTKEEILKAFKLFDDDETGKISFK------ 124
Query: 263 FDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGK 314
+L R + G N + D ++ + D+DGDG +S+ E L I K
Sbjct: 125 -NLKRVAKELGENLT-------DEELQEXIDEADRDGDGEVSEQEFLRIXKK 168
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 27.7 bits (60), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEF 258
E F D +GDGL++ E H + KL E +RE SD G++N K+F
Sbjct: 88 EAFKVFDKNGDGLISAAELK---HVLTSIGEKLTDAEVDEMLREV-SDGSGEINIKQF 141
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 27.7 bits (60), Expect = 9.1, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 200 EEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFF 259
+E F+ D DGDG + E + + L ++ + E D+D +G ++F EF
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL---QDMINEVDADGNGTIDFPEFL 69
Query: 260 HGLFDLVRNYDDE 272
+ +++ D E
Sbjct: 70 TMMARKMKDTDSE 82
>pdb|1I1I|P Chain P, Neurolysin (Endopeptidase 24.16) Crystal Structure
Length = 681
Score = 27.7 bits (60), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 38/99 (38%), Gaps = 2/99 (2%)
Query: 156 RTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLN 215
R + EM H + K + + P +R GY+ N + +
Sbjct: 238 RRKMEMAFHTRCKQENTAILQQLLP--LRAQVAKLLGYNTHADFVLELNTAKSTSRVAAF 295
Query: 216 LTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVN 254
L + + L P + IL L K+E ER + DGK+N
Sbjct: 296 LDDLSQKLKPLGEAEREFILSLKKKECEERGFEYDGKIN 334
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 27.7 bits (60), Expect = 9.4, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 200 EEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFF 259
+E F+ D DGDG + E + + L ++ + E D+D +G ++F EF
Sbjct: 13 KEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAEL---QDMINEVDADGNGTIDFPEFL 69
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.135 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,886,537
Number of Sequences: 62578
Number of extensions: 558165
Number of successful extensions: 2188
Number of sequences better than 100.0: 182
Number of HSP's better than 100.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 102
Number of HSP's that attempted gapping in prelim test: 1550
Number of HSP's gapped (non-prelim): 467
length of query: 339
length of database: 14,973,337
effective HSP length: 99
effective length of query: 240
effective length of database: 8,778,115
effective search space: 2106747600
effective search space used: 2106747600
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 52 (24.6 bits)