BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019566
(339 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3LHL|A Chain A, Crystal Structure Of A Putative Agmatinase From
Clostridium Difficile
Length = 287
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 136/278 (48%), Gaps = 17/278 (6%)
Query: 64 LLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKELNDPRVLTDVGDVPVQEIR 123
+ GV +S G FA R+ + T S + +L D + D GD+ +
Sbjct: 12 VFGVGFDGTTSNRPGARFASSSXRKEFYGLETYSPFLD-LDLEDYNIC-DYGDLEIS--- 66
Query: 124 DCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDVLHLDA 183
G + L + E+ K+V D P +GG+H ++ P +AV EK + V+H DA
Sbjct: 67 -VGSTEQVLKEIYQETYKIV--RDSKVPFXIGGEHLVTLPAFKAVHEKYN-DIYVIHFDA 122
Query: 184 HPDIYDAFEGNKYSHASSFARIMEGGYARRLLQVGIRSITKEGREQGKRFGVEQYEMRTF 243
H D+ + + +K SHA+ RI + ++ Q GIRS TKE +F E+
Sbjct: 123 HTDLREEYNNSKNSHATVIKRIWDIVGDNKIFQFGIRSGTKEEF----KFATEEKHTYXE 178
Query: 244 SRDRQFLENLKLGEGVKGVYISVDVDCLDPAFAPGVSHIEPGGLSFR---DVLNILHNLQ 300
EN+ K +Y+++D+D LD + PG EPGG+++R ++ I+ N
Sbjct: 179 IGGIDTFENIVNXLNGKNIYLTIDLDVLDASVFPGTGTPEPGGVNYREFQEIFKIIKNSN 238
Query: 301 ADVVAADVVEFNPQRDTVDGMTAMVAAKLVRELTAKIS 338
++V D+VE +P DT G++ ++A K++REL IS
Sbjct: 239 INIVGCDIVELSPDYDTT-GVSTVIACKILRELCLIIS 275
>pdb|3NIO|A Chain A, Crystal Structure Of Pseudomonas Aeruginosa
Guanidinobutyrase
pdb|3NIO|B Chain B, Crystal Structure Of Pseudomonas Aeruginosa
Guanidinobutyrase
pdb|3NIO|C Chain C, Crystal Structure Of Pseudomonas Aeruginosa
Guanidinobutyrase
pdb|3NIO|D Chain D, Crystal Structure Of Pseudomonas Aeruginosa
Guanidinobutyrase
pdb|3NIO|E Chain E, Crystal Structure Of Pseudomonas Aeruginosa
Guanidinobutyrase
pdb|3NIO|F Chain F, Crystal Structure Of Pseudomonas Aeruginosa
Guanidinobutyrase
Length = 319
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/287 (31%), Positives = 142/287 (49%), Gaps = 34/287 (11%)
Query: 63 SLLGVPLGHNSSFLQGPAFAPPRIR-EAIWCGSTNSTTEEGKELNDPRVLTDVGDVPVQE 121
+ +GVPL +S G F P IR E++ N T G D + D+GDV +
Sbjct: 41 AFVGVPLDIGTSLRSGTRFGPREIRAESVMIRPYNMAT--GAAPFDSLNVADIGDVAINT 98
Query: 122 IRDCGVDDDRLMNVITESVKLVMEE------DPLHPLVLGGDHSISFPVIRAVSEKLGGP 175
+ E+V+++ +E + PL LGGDH+I+ P++RA+ K G
Sbjct: 99 FN------------LLEAVRIIEQEYDRILGHGILPLTLGGDHTITLPILRAIX-KXHGX 145
Query: 176 VDVLHLDAHPDIYDAFEGNKYSHASSFARIMEGGY--ARRLLQVGIRS--ITKE----GR 227
V ++H+DAH D+ D G +H ++F R +E R++Q+G+R+ T E R
Sbjct: 146 VGLVHVDAHADVNDHMFGEXIAHGTTFRRAVEEDLLDCDRVVQIGLRAQGYTAEDFNWSR 205
Query: 228 EQGKRFGVEQYEMRTFSRDRQFLENLKLGEGVKGVYISVDVDCLDPAFAPGVSHIEPGGL 287
QG F V Q E + ++ G VY+S D+D +DPA+APG E GGL
Sbjct: 206 XQG--FRVVQAEECWHXSLEPLMAEVREXVGGGPVYLSFDIDGIDPAWAPGTGTPEIGGL 263
Query: 288 SFRDVLNILHNLQA-DVVAADVVEFNPQRDTVDGMTAMVAAKLVREL 333
+ + I+ Q D++ D+VE +P DT G T+++ A L+ E+
Sbjct: 264 TTIQAMEIIRGCQGLDLIGCDLVEVSPPYDTT-GNTSLLGANLLYEM 309
>pdb|3PZL|A Chain A, The Crystal Structure Of Agmatine Ureohydrolase Of
Thermoplasma Volcanium
pdb|3PZL|B Chain B, The Crystal Structure Of Agmatine Ureohydrolase Of
Thermoplasma Volcanium
pdb|3PZL|C Chain C, The Crystal Structure Of Agmatine Ureohydrolase Of
Thermoplasma Volcanium
Length = 313
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 141/283 (49%), Gaps = 21/283 (7%)
Query: 60 ASTSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKELNDPRVLTDVGDVPV 119
A + G+P + SS+ +G +AP IR A + + G +L D+GD
Sbjct: 35 AKYVVFGIPFDNTSSYRRGSKYAPDSIRGA-YVNLESYEYSYGIDLL-ASGXADLGDXEE 92
Query: 120 QEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDVL 179
E + +D ESV + D P+ LGG+HSI+ +RA+ + VD++
Sbjct: 93 SEDVEYVID-------TVESVVSAVXSDGKIPIXLGGEHSITVGAVRALPKD----VDLV 141
Query: 180 HLDAHPDIYDAFEGNKYSHASSFARIMEGGYARRLLQVGIRSITKEGREQ---GKRFGVE 236
+DAH D ++ GNKY+HA R ++ R+ +GIRS+++E E K +
Sbjct: 142 IVDAHSDFRSSYXGNKYNHACVTRRALDLLGEGRITSIGIRSVSREEFEDPDFRKVSFIS 201
Query: 237 QYEMRTFSRDRQFLENLKLGEGVKGVYISVDVDCLDPAFAPGVSHIEPGGLSFRDVLNIL 296
++++ D+ E + + VYISVD D +DPA+AP V EP GL+ DV ++
Sbjct: 202 SFDVKKNGIDKYIEE---VDRKSRRVYISVDXDGIDPAYAPAVGTPEPFGLADTDVRRLI 258
Query: 297 HNLQADVVAADVVEFNPQRDTVDGMTAMVAAKLVRELTAKISK 339
L V D+VEF+P D +G T+ +AAKL++ A K
Sbjct: 259 ERLSYKAVGFDIVEFSPLYD--NGNTSXLAAKLLQVFIASREK 299
>pdb|4DZ4|A Chain A, X-Ray Crystal Structure Of A Hypothetical Agmatinase From
Burkholderia Thailandensis
pdb|4DZ4|B Chain B, X-Ray Crystal Structure Of A Hypothetical Agmatinase From
Burkholderia Thailandensis
pdb|4DZ4|C Chain C, X-Ray Crystal Structure Of A Hypothetical Agmatinase From
Burkholderia Thailandensis
pdb|4DZ4|D Chain D, X-Ray Crystal Structure Of A Hypothetical Agmatinase From
Burkholderia Thailandensis
pdb|4DZ4|E Chain E, X-Ray Crystal Structure Of A Hypothetical Agmatinase From
Burkholderia Thailandensis
pdb|4DZ4|F Chain F, X-Ray Crystal Structure Of A Hypothetical Agmatinase From
Burkholderia Thailandensis
Length = 324
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 131/275 (47%), Gaps = 26/275 (9%)
Query: 68 PLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKELND-PRVLTDVGDVPVQEIRDCG 126
PL ++F G P +R A + + ELN P D+ V + DC
Sbjct: 55 PLDLATTFRSGARLGPSAVRAA---------SVQLAELNPYPWGFDPFDDLAVIDYGDCW 105
Query: 127 VDDDRLMNV---ITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDVLHLDA 183
D +++ I E + +++ D L LGGDH I++P++ A ++K G P+ ++H DA
Sbjct: 106 FDAHHPLSIKPAIVEHARTILQSDA-RMLTLGGDHYITYPLLIAHAQKYGKPLSLIHFDA 164
Query: 184 HPDIYDAFEGNKYSHASSFARIMEGGY--ARRLLQVGIRSITKEGREQGKRFGVEQYEMR 241
H D + + +H + F + ++ G + +QVGIR+ + G+ +
Sbjct: 165 HCDTWADDAPDSLNHGTMFYKAVKDGLIDPKASVQVGIRTWNDD------YLGINVLDAA 218
Query: 242 TFSRD--RQFLENLKLGEGVKGVYISVDVDCLDPAFAPGVSHIEPGGLSFRDVLNILHNL 299
R LE ++ G + Y++ D+DCLDPAFAPG GGLS L I+ L
Sbjct: 219 WVHEHGARATLERIESIVGGRPAYLTFDIDCLDPAFAPGTGTPVAGGLSSAQALAIVRGL 278
Query: 300 QA-DVVAADVVEFNPQRDTVDGMTAMVAAKLVREL 333
+++ ADVVE P D + +TA+ AA + +L
Sbjct: 279 GGVNLIGADVVEVAPAYDQSE-ITAIAAAHVACDL 312
>pdb|3NIP|A Chain A, Crystal Structure Of Pseudomonas Aeruginosa
Guanidinopropionase Complexed With 1,6-Diaminohexane
pdb|3NIP|B Chain B, Crystal Structure Of Pseudomonas Aeruginosa
Guanidinopropionase Complexed With 1,6-Diaminohexane
pdb|3NIP|C Chain C, Crystal Structure Of Pseudomonas Aeruginosa
Guanidinopropionase Complexed With 1,6-Diaminohexane
pdb|3NIP|D Chain D, Crystal Structure Of Pseudomonas Aeruginosa
Guanidinopropionase Complexed With 1,6-Diaminohexane
pdb|3NIP|E Chain E, Crystal Structure Of Pseudomonas Aeruginosa
Guanidinopropionase Complexed With 1,6-Diaminohexane
pdb|3NIP|F Chain F, Crystal Structure Of Pseudomonas Aeruginosa
Guanidinopropionase Complexed With 1,6-Diaminohexane
pdb|3NIQ|A Chain A, Crystal Structure Of Pseudomonas Aeruginosa
Guanidinopropionase
pdb|3NIQ|B Chain B, Crystal Structure Of Pseudomonas Aeruginosa
Guanidinopropionase
Length = 326
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 103/199 (51%), Gaps = 15/199 (7%)
Query: 151 PLVLGGDHSISFPVIRAVSEKLGGPVDVLHLDAHPDIYDAFEG-NKYSHASSFARIMEGG 209
PL +GGDH ++ P+ RA+ + P+ ++H DAH D D + G N Y+H + F R +E G
Sbjct: 119 PLSVGGDHLVTLPIFRALGRER--PLGMVHFDAHSDTNDRYFGDNPYTHGTPFRRAIEEG 176
Query: 210 Y--ARRLLQVGIRSITKE------GREQGKRFGVEQYEMRTFSRDRQFLENLKLGEGVKG 261
R +Q+GIR RE G R + E + E ++ G
Sbjct: 177 LLDPLRTVQIGIRGSVYSPDDDAFARECGIRV-IHMEEFVELGVEATLAEARRV-VGAGP 234
Query: 262 VYISVDVDCLDPAFAPGVSHIEPGGLSFRDVLNILHNLQA-DVVAADVVEFNPQRDTVDG 320
Y+S DVD LDPAFAPG E GG++ ++ L+ D+V ADVVE +P D V G
Sbjct: 235 TYVSFDVDVLDPAFAPGTGTPEIGGMTSLQAQQLVRGLRGLDLVGADVVEVSPPFD-VGG 293
Query: 321 MTAMVAAKLVRELTAKISK 339
TA+V A ++ EL +++
Sbjct: 294 ATALVGATMMFELLCLLAE 312
>pdb|1WOG|A Chain A, Crystal Structure Of Agmatinase Reveals Structural
Conservation And Inhibition Mechanism Of The
Ureohydrolase Superfamily
pdb|1WOG|B Chain B, Crystal Structure Of Agmatinase Reveals Structural
Conservation And Inhibition Mechanism Of The
Ureohydrolase Superfamily
pdb|1WOG|C Chain C, Crystal Structure Of Agmatinase Reveals Structural
Conservation And Inhibition Mechanism Of The
Ureohydrolase Superfamily
pdb|1WOG|D Chain D, Crystal Structure Of Agmatinase Reveals Structural
Conservation And Inhibition Mechanism Of The
Ureohydrolase Superfamily
pdb|1WOG|E Chain E, Crystal Structure Of Agmatinase Reveals Structural
Conservation And Inhibition Mechanism Of The
Ureohydrolase Superfamily
pdb|1WOG|F Chain F, Crystal Structure Of Agmatinase Reveals Structural
Conservation And Inhibition Mechanism Of The
Ureohydrolase Superfamily
pdb|1WOH|A Chain A, Crystal Structure Of Agmatinase Reveals Structural
Conservation And Inhibition Mechanism Of The
Ureohydrolase Superfamily
pdb|1WOH|B Chain B, Crystal Structure Of Agmatinase Reveals Structural
Conservation And Inhibition Mechanism Of The
Ureohydrolase Superfamily
pdb|1WOH|C Chain C, Crystal Structure Of Agmatinase Reveals Structural
Conservation And Inhibition Mechanism Of The
Ureohydrolase Superfamily
pdb|1WOH|D Chain D, Crystal Structure Of Agmatinase Reveals Structural
Conservation And Inhibition Mechanism Of The
Ureohydrolase Superfamily
pdb|1WOH|E Chain E, Crystal Structure Of Agmatinase Reveals Structural
Conservation And Inhibition Mechanism Of The
Ureohydrolase Superfamily
pdb|1WOH|F Chain F, Crystal Structure Of Agmatinase Reveals Structural
Conservation And Inhibition Mechanism Of The
Ureohydrolase Superfamily
pdb|1WOI|A Chain A, Crystal Structure Of Agmatinase Reveals Structural
Conservation And Inhibition Mechanism Of The
Ureohydrolase Superfamily
pdb|1WOI|B Chain B, Crystal Structure Of Agmatinase Reveals Structural
Conservation And Inhibition Mechanism Of The
Ureohydrolase Superfamily
pdb|1WOI|C Chain C, Crystal Structure Of Agmatinase Reveals Structural
Conservation And Inhibition Mechanism Of The
Ureohydrolase Superfamily
pdb|1WOI|D Chain D, Crystal Structure Of Agmatinase Reveals Structural
Conservation And Inhibition Mechanism Of The
Ureohydrolase Superfamily
pdb|1WOI|E Chain E, Crystal Structure Of Agmatinase Reveals Structural
Conservation And Inhibition Mechanism Of The
Ureohydrolase Superfamily
pdb|1WOI|F Chain F, Crystal Structure Of Agmatinase Reveals Structural
Conservation And Inhibition Mechanism Of The
Ureohydrolase Superfamily
Length = 305
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 134/296 (45%), Gaps = 18/296 (6%)
Query: 48 KGELVRALGGAVASTSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKELND 107
+ LV+ G A + LGVP F G FAP +REA T +GK
Sbjct: 17 RAPLVQPDGDWQADVAALGVPFDIALGFRPGARFAPRALREASLRSVPPFTGLDGKTRLQ 76
Query: 108 PRVLTDVGDVPVQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRA 167
D GDV + + + + DR ITE+ + V + P+ LGGDHS+S+P++RA
Sbjct: 77 GVTFADAGDVILPSL-EPQLAHDR----ITEAARQVRGRCRV-PVFLGGDHSVSYPLLRA 130
Query: 168 VSEKLGGPVDVLHLDAHPDIYDAFEGNKYSHASSFARIMEG-GYARRLLQVGIRSI--TK 224
++ + V+ LDAH D D K+S++S F R E + VG+R +
Sbjct: 131 FADVPD--LHVVQLDAHLDFTDTRNDTKWSNSSPFRRACEALPNLVHITTVGLRGLRFDP 188
Query: 225 EGREQGKRFGVEQYEMRTFSRDRQ-FLENLKLGEGVKGVYISVDVDCLDPAFAPGVSHIE 283
E + G M + D L L G+ V Y SVDVD DPA PG S E
Sbjct: 189 EAVAAARARGHTIIPMDDVTADLAGVLAQLPRGQNV---YFSVDVDGFDPAVIPGTSSPE 245
Query: 284 PGGLSFRDVLNIL--HNLQADVVAADVVEFNPQRDTVDGMTAMVAAKLVRELTAKI 337
P GL++ + IL VV D+VE P D G + ++ A+LV E ++
Sbjct: 246 PDGLTYAQGMKILAAAAANNTVVGLDLVELAPNLDPT-GRSELLMARLVMETLCEV 300
>pdb|1GQ6|A Chain A, Proclavaminate Amidino Hydrolase From Streptomyces
Clavuligerus
pdb|1GQ6|B Chain B, Proclavaminate Amidino Hydrolase From Streptomyces
Clavuligerus
pdb|1GQ6|C Chain C, Proclavaminate Amidino Hydrolase From Streptomyces
Clavuligerus
pdb|1GQ7|A Chain A, Proclavaminate Amidino Hydrolase From Streptomyces
Clavuligerus
pdb|1GQ7|B Chain B, Proclavaminate Amidino Hydrolase From Streptomyces
Clavuligerus
pdb|1GQ7|C Chain C, Proclavaminate Amidino Hydrolase From Streptomyces
Clavuligerus
pdb|1GQ7|D Chain D, Proclavaminate Amidino Hydrolase From Streptomyces
Clavuligerus
pdb|1GQ7|E Chain E, Proclavaminate Amidino Hydrolase From Streptomyces
Clavuligerus
pdb|1GQ7|F Chain F, Proclavaminate Amidino Hydrolase From Streptomyces
Clavuligerus
Length = 313
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 107/197 (54%), Gaps = 13/197 (6%)
Query: 152 LVLGGDHSISFPVIRAVSEKLGGPVDVLHLDAHPDIYDAFEGNKYSHASSFARIMEGGY- 210
L++GGDHS++ +RAV+E+ G P+ V+HLDAH D AF G +Y H + F ++
Sbjct: 115 LMIGGDHSLTVAALRAVAEQHG-PLAVVHLDAHSDTNPAFYGGRYHHGTPFRHGIDEKLI 173
Query: 211 -ARRLLQVGIR--SITKEGREQGKRFGVEQYEMRTFSR----DRQFLENLKLGEGVKGVY 263
++Q+GIR + + + + GV F L K+G+ + VY
Sbjct: 174 DPAAMVQIGIRGHNPKPDSLDYARGHGVRVVTADEFGELGVGGTADLIREKVGQ--RPVY 231
Query: 264 ISVDVDCLDPAFAPGVSHIEPGGLSFRDVLNILHNL-QADVVAADVVEFNPQRDTVDGMT 322
+SVD+D +DPAFAPG PGGL R+VL +L + V DV+E +P D G+T
Sbjct: 232 VSVDIDVVDPAFAPGTGTPAPGGLLSREVLALLRCVGDLKPVGFDVMEVSPLYDH-GGIT 290
Query: 323 AMVAAKLVRELTAKISK 339
+++A ++ EL + ++
Sbjct: 291 SILATEIGAELLYQYAR 307
>pdb|3M1R|A Chain A, The Crystal Structure Of Formimidoylglutamase From
Bacillus Subtilis Subsp. Subtilis Str. 168
pdb|3M1R|B Chain B, The Crystal Structure Of Formimidoylglutamase From
Bacillus Subtilis Subsp. Subtilis Str. 168
pdb|3M1R|C Chain C, The Crystal Structure Of Formimidoylglutamase From
Bacillus Subtilis Subsp. Subtilis Str. 168
pdb|3M1R|D Chain D, The Crystal Structure Of Formimidoylglutamase From
Bacillus Subtilis Subsp. Subtilis Str. 168
pdb|3M1R|E Chain E, The Crystal Structure Of Formimidoylglutamase From
Bacillus Subtilis Subsp. Subtilis Str. 168
pdb|3M1R|F Chain F, The Crystal Structure Of Formimidoylglutamase From
Bacillus Subtilis Subsp. Subtilis Str. 168
Length = 322
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 148/307 (48%), Gaps = 28/307 (9%)
Query: 42 RERAKLKGELVRALGGAVASTSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEE 101
R+ K + G + +L+GVPL +S G +FAP IR+A+ S S E
Sbjct: 20 RDVTKXSDLIATWDGQDIKGPALIGVPLSKSSISHSGASFAPGTIRQALKHSSAYSA-EL 78
Query: 102 GKELNDPRVLTDVGDVPVQEIRDCGVDDDRLMNVITESVKLVMEEDP-LHPLVLGGDHSI 160
G+ + +L D+GD+ + D + + I ++ ++ + P PL+LGGD+SI
Sbjct: 79 GEHVVS-ELLYDLGDIDIHV-----TDIVKSHHHIFQTXHALLSDHPDWVPLILGGDNSI 132
Query: 161 SFPVIRAVSEKLGGPVDVLHLDAHPDIYDAFEGNKYSHASSFAR-----IMEGGYARRLL 215
S+ I+A+++ G V+ DAH D+ + +G ++ + F R I+EG + L+
Sbjct: 133 SYSTIKAIAQT-KGTTAVIQFDAHHDVRNTEDGGP-TNGTPFRRLLDEEIIEG---QHLI 187
Query: 216 QVGIRSITKEGREQG--KRFGVEQYEMRTFSRDRQFLENLK-----LGEGVKGVYISVDV 268
Q+GIR + + K+ V + R++ + +K + + ++ISVD
Sbjct: 188 QLGIREFSNSQAYEAYAKKHNVNIHTXDXI-REKGLIPTIKEILPVVQDKTDFIFISVDX 246
Query: 269 DCLDPAFAPGVSHIEPGGLSFRDVLNILHNL--QADVVAADVVEFNPQRDTVDGMTAMVA 326
D LD + APG I PGGL ++L + + Q +V ++VE +P D D + A
Sbjct: 247 DVLDQSHAPGCPAIGPGGLYTDELLEAVKYIAQQPNVAGIEIVEVDPTLDFRDXTSRAAA 306
Query: 327 AKLVREL 333
L+ L
Sbjct: 307 HVLLHAL 313
>pdb|1CEV|A Chain A, Arginase From Bacillus Caldovelox, Native Structure At Ph
5.6
pdb|1CEV|B Chain B, Arginase From Bacillus Caldovelox, Native Structure At Ph
5.6
pdb|1CEV|C Chain C, Arginase From Bacillus Caldovelox, Native Structure At Ph
5.6
pdb|1CEV|D Chain D, Arginase From Bacillus Caldovelox, Native Structure At Ph
5.6
pdb|1CEV|E Chain E, Arginase From Bacillus Caldovelox, Native Structure At Ph
5.6
pdb|1CEV|F Chain F, Arginase From Bacillus Caldovelox, Native Structure At Ph
5.6
pdb|2CEV|A Chain A, Arginase From Bacillus Caldevelox, Native Structure At Ph
8.5
pdb|2CEV|B Chain B, Arginase From Bacillus Caldevelox, Native Structure At Ph
8.5
pdb|2CEV|C Chain C, Arginase From Bacillus Caldevelox, Native Structure At Ph
8.5
pdb|2CEV|D Chain D, Arginase From Bacillus Caldevelox, Native Structure At Ph
8.5
pdb|2CEV|E Chain E, Arginase From Bacillus Caldevelox, Native Structure At Ph
8.5
pdb|2CEV|F Chain F, Arginase From Bacillus Caldevelox, Native Structure At Ph
8.5
pdb|3CEV|A Chain A, Arginase From Bacillus Caldevelox, Complexed With
L-arginine
pdb|3CEV|B Chain B, Arginase From Bacillus Caldevelox, Complexed With
L-arginine
pdb|3CEV|C Chain C, Arginase From Bacillus Caldevelox, Complexed With
L-arginine
pdb|3CEV|D Chain D, Arginase From Bacillus Caldevelox, Complexed With
L-arginine
pdb|3CEV|E Chain E, Arginase From Bacillus Caldevelox, Complexed With
L-arginine
pdb|3CEV|F Chain F, Arginase From Bacillus Caldevelox, Complexed With
L-arginine
pdb|4CEV|A Chain A, Arginase From Bacillus Caldevelox, L-Ornithine Complex
pdb|4CEV|B Chain B, Arginase From Bacillus Caldevelox, L-Ornithine Complex
pdb|4CEV|C Chain C, Arginase From Bacillus Caldevelox, L-Ornithine Complex
pdb|4CEV|D Chain D, Arginase From Bacillus Caldevelox, L-Ornithine Complex
pdb|4CEV|E Chain E, Arginase From Bacillus Caldevelox, L-Ornithine Complex
pdb|4CEV|F Chain F, Arginase From Bacillus Caldevelox, L-Ornithine Complex
pdb|5CEV|A Chain A, Arginase From Bacillus Caldevelox, L-Lysine Complex
pdb|5CEV|B Chain B, Arginase From Bacillus Caldevelox, L-Lysine Complex
pdb|5CEV|C Chain C, Arginase From Bacillus Caldevelox, L-Lysine Complex
pdb|5CEV|D Chain D, Arginase From Bacillus Caldevelox, L-Lysine Complex
pdb|5CEV|E Chain E, Arginase From Bacillus Caldevelox, L-Lysine Complex
pdb|5CEV|F Chain F, Arginase From Bacillus Caldevelox, L-Lysine Complex
Length = 299
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 126/259 (48%), Gaps = 44/259 (16%)
Query: 111 LTDVGDVPV---QEIRDCGVDDDRLMN---VITESVKLVMEEDPL-----HPLVLGGDHS 159
+ D+GD+P+ + + + G D RL N V + KL D + PLVLGGDHS
Sbjct: 43 IEDLGDIPIGKAERLHEQG--DSRLRNLKAVAEANEKLAAAVDQVVQRGRFPLVLGGDHS 100
Query: 160 ISFPVIRAVS---EKLGGPVDVLHLDAHPDIYDA-------FEGNKYSHASSF---ARIM 206
I+ + V+ E+LG V+ DAH D+ A G + + F A
Sbjct: 101 IAIGTLAGVAKHYERLG----VIWYDAHGDVNTAETSPSGNIHGMPLAASLGFGHPALTQ 156
Query: 207 EGGYARRL-----LQVGIRSITKEGREQGKRFGVEQYEMRTFSR---DRQFLENLK-LGE 257
GGY+ ++ + +G+RS+ + ++ + G++ Y M R R E + L E
Sbjct: 157 IGGYSPKIKPEHVVLIGVRSLDEGEKKFIREKGIKIYTMHEVDRLGMTRVMEETIAYLKE 216
Query: 258 GVKGVYISVDVDCLDPAFAPGVSHIEPGGLSFRD---VLNILHNLQADVVAADVVEFNPQ 314
GV++S+D+D LDP+ APGV GGL++R+ + +L Q + +A+ VE NP
Sbjct: 217 RTDGVHLSLDLDGLDPSDAPGVGTPVIGGLTYRESHLAMEMLAEAQI-ITSAEFVEVNPI 275
Query: 315 RDTVDGMTAMVAAKLVREL 333
D + TA VA L+ L
Sbjct: 276 LDERN-KTASVAVALMGSL 293
>pdb|2EIV|A Chain A, Crystal Structure Of The Arginase From Thermus
Thermophilus
pdb|2EIV|C Chain C, Crystal Structure Of The Arginase From Thermus
Thermophilus
pdb|2EIV|D Chain D, Crystal Structure Of The Arginase From Thermus
Thermophilus
pdb|2EIV|E Chain E, Crystal Structure Of The Arginase From Thermus
Thermophilus
pdb|2EIV|F Chain F, Crystal Structure Of The Arginase From Thermus
Thermophilus
pdb|2EIV|G Chain G, Crystal Structure Of The Arginase From Thermus
Thermophilus
pdb|2EIV|H Chain H, Crystal Structure Of The Arginase From Thermus
Thermophilus
pdb|2EIV|I Chain I, Crystal Structure Of The Arginase From Thermus
Thermophilus
pdb|2EIV|J Chain J, Crystal Structure Of The Arginase From Thermus
Thermophilus
pdb|2EIV|K Chain K, Crystal Structure Of The Arginase From Thermus
Thermophilus
pdb|2EIV|L Chain L, Crystal Structure Of The Arginase From Thermus
Thermophilus
pdb|2EIV|M Chain M, Crystal Structure Of The Arginase From Thermus
Thermophilus
Length = 291
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 107/239 (44%), Gaps = 49/239 (20%)
Query: 113 DVGDVPV----------------QEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGG 156
D+GDVPV +EIR + + + E V P+VLGG
Sbjct: 45 DLGDVPVSLARASRRRGRGLAYLEEIRAAALVLKERLAALPEGV---------FPIVLGG 95
Query: 157 DHSISFPVIRAVSEKLGGPVDVLHLDAHPDIYDAFEGNKYS--HASSFARIMEGGYARR- 213
DHS+S + + G V V+ +DAH D ++ E + H A + G+ R
Sbjct: 96 DHSLSMGSVAGAAR--GRRVGVVWVDAHAD-FNTPETSPSGNVHGMPLAVLSGLGHPRLT 152
Query: 214 ----------LLQVGIRSITKEGREQGKRFGVEQYEMRTFSR---DRQFLENLKLGEGVK 260
++ VG+RS+ + K GV Y M R R E LK +G+
Sbjct: 153 EVFRAVDPKDVVLVGVRSLDPGEKRLLKEAGVRVYTMHEVDRLGVARIAEEVLKHLQGLP 212
Query: 261 GVYISVDVDCLDPAFAPGVSHIEPGGLSFRDVLNILHNLQAD---VVAADVVEFNPQRD 316
+++S+D D LDP APGV PGGL++R+ ++L + A+ V + D+VE NP D
Sbjct: 213 -LHVSLDADVLDPTLAPGVGTPVPGGLTYREA-HLLMEILAESGRVQSLDLVEVNPILD 269
>pdb|2EF4|A Chain A, Crystal Structure Of The Arginase From Thermus
Thermophilus
pdb|2EF5|A Chain A, Crystal Structure Of The Arginase From Thermus
Thermophilus
pdb|2EF5|B Chain B, Crystal Structure Of The Arginase From Thermus
Thermophilus
pdb|2EF5|D Chain D, Crystal Structure Of The Arginase From Thermus
Thermophilus
pdb|2EF5|E Chain E, Crystal Structure Of The Arginase From Thermus
Thermophilus
pdb|2EF5|F Chain F, Crystal Structure Of The Arginase From Thermus
Thermophilus
pdb|2EF5|G Chain G, Crystal Structure Of The Arginase From Thermus
Thermophilus
Length = 290
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 107/239 (44%), Gaps = 49/239 (20%)
Query: 113 DVGDVPV----------------QEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGG 156
D+GDVPV +EIR + + + E V P+VLGG
Sbjct: 44 DLGDVPVSLARASRRRGRGLAYLEEIRAAALVLKERLAALPEGV---------FPIVLGG 94
Query: 157 DHSISFPVIRAVSEKLGGPVDVLHLDAHPDIYDAFEGNKYS--HASSFARIMEGGYARR- 213
DHS+S + + G V V+ +DAH D ++ E + H A + G+ R
Sbjct: 95 DHSLSMGSVAGAAR--GRRVGVVWVDAHAD-FNTPETSPSGNVHGMPLAVLSGLGHPRLT 151
Query: 214 ----------LLQVGIRSITKEGREQGKRFGVEQYEMRTFSR---DRQFLENLKLGEGVK 260
++ VG+RS+ + K GV Y M R R E LK +G+
Sbjct: 152 EVFRAVDPKDVVLVGVRSLDPGEKRLLKEAGVRVYTMHEVDRLGVARIAEEVLKHLQGLP 211
Query: 261 GVYISVDVDCLDPAFAPGVSHIEPGGLSFRDVLNILHNLQAD---VVAADVVEFNPQRD 316
+++S+D D LDP APGV PGGL++R+ ++L + A+ V + D+VE NP D
Sbjct: 212 -LHVSLDADVLDPTLAPGVGTPVPGGLTYREA-HLLMEILAESGRVQSLDLVEVNPILD 268
>pdb|3MMR|A Chain A, Structure Of Plasmodium Falciparum Arginase In Complex
With Abh
pdb|3SL0|A Chain A, Crystal Structure Of P. Falciparum Arginase Complexed With
2-Amino-6- Borono-2-(Difluoromethyl)hexanoic Acid
pdb|3SL1|A Chain A, Crystal Structure Of P. Falciparum Arginase Complexed With
2-Amino-6- Borono-2-Methylhexanoic Acid
Length = 413
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 98/222 (44%), Gaps = 39/222 (17%)
Query: 152 LVLGGDHSISFPVIRAVSEKLGGPVDVLHLDAHPDIY-------DAFEGNKYSHASSFAR 204
L +GGDH ++F I + S ++ + V+ +DAH DI + G +H +
Sbjct: 189 LNIGGDHGVAFSSILS-SLQMYQNLRVIWIDAHGDINIPETSPSGNYHGMTLAHTLGLFK 247
Query: 205 ----IMEGGYARRLLQ------VGIRSITKEGREQGKRFGVEQYEMRTFSRDRQF----- 249
E L+ +GIR I + K+ + Y + ++ +
Sbjct: 248 KKVPYFEWSENLTYLKPENTAIIGIRDIDAYEKIILKKCNINYYTIFDIEKNGIYNTICT 307
Query: 250 -LENLKLGEGVKGVYISVDVDCLDPAFAPGVSHIEPGGLSFRDVLNILHNLQAD---VVA 305
LE + ++IS+D+D +D FAPG + GGL++R++ N+L + A+ VV+
Sbjct: 308 ALEKIDPNSNCP-IHISLDIDSVDNVFAPGTGTVAKGGLNYREI-NLLMKILAETKRVVS 365
Query: 306 ADVVEFNPQRDTVDGM----------TAMVAAKLVRELTAKI 337
D+VE+NP D VD A KL EL A++
Sbjct: 366 MDLVEYNPSLDEVDKKVHGDSLPILDNATKTGKLCLELIARV 407
>pdb|1PQ3|A Chain A, Human Arginase Ii: Crystal Structure And Physiological
Role In Male And Female Sexual Arousal
pdb|1PQ3|B Chain B, Human Arginase Ii: Crystal Structure And Physiological
Role In Male And Female Sexual Arousal
pdb|1PQ3|C Chain C, Human Arginase Ii: Crystal Structure And Physiological
Role In Male And Female Sexual Arousal
pdb|1PQ3|D Chain D, Human Arginase Ii: Crystal Structure And Physiological
Role In Male And Female Sexual Arousal
pdb|1PQ3|E Chain E, Human Arginase Ii: Crystal Structure And Physiological
Role In Male And Female Sexual Arousal
pdb|1PQ3|F Chain F, Human Arginase Ii: Crystal Structure And Physiological
Role In Male And Female Sexual Arousal
Length = 306
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 119/289 (41%), Gaps = 42/289 (14%)
Query: 61 STSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKELND----PRVLTDVGD 116
S +++G P +G P IREA +S K+ D P D+ +
Sbjct: 2 SVAVIGAPFSQGQK-RKGVEHGPAAIREAGLMKRLSSLGCHLKDFGDLSFTPVPKDDLYN 60
Query: 117 VPVQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPV 176
+ R G+ + L V++ +V D + LGGDHS++ I + +
Sbjct: 61 NLIVNPRSVGLANQELAEVVSRAVS-----DGYSCVTLGGDHSLAIGTISGHARHCPD-L 114
Query: 177 DVLHLDAHPDIYDAF---EGNKYSHASSF---------------ARIMEGGYARRLLQVG 218
V+ +DAH DI GN + SF + I + ++ +G
Sbjct: 115 CVVWVDAHADINTPLTTSSGNLHGQPVSFLLRELQDKVPQLPGFSWIKPCISSASIVYIG 174
Query: 219 IRSITKEGREQGKRFGVEQYEMRTFSR-------DRQFLENLKLGEGVKGVYISVDVDCL 271
+R + K + ++ + MR R +R F +L +G+ + +++S D+D
Sbjct: 175 LRDVDPPEHFILKNYDIQYFSMRDIDRLGIQKVMERTF--DLLIGKRQRPIHLSFDIDAF 232
Query: 272 DPAFAPGVSHIEPGGLSFRDVLNI---LHNLQADVVAADVVEFNPQRDT 317
DP AP GGL++R+ + I +HN + A D+VE NPQ T
Sbjct: 233 DPTLAPATGTPVVGGLTYREGMYIAEEIHN-TGLLSALDLVEVNPQLAT 280
>pdb|1XFK|A Chain A, 1.8a Crsytal Strucutre Of Formiminoglutamase From Vibrio
Cholerae O1 Biovar Eltor Str. N16961
Length = 336
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 109/247 (44%), Gaps = 27/247 (10%)
Query: 117 VPVQEIRDCGVDDDRLMNVITESVKLVMEEDP-LHPLVLGGDHSISFPVIRAVSEKLGGP 175
+P+ ++ + + D L E +++ + P +VLGG H I++ + +++
Sbjct: 85 IPIYDLGNIRCEGDELEQAQQECAQVIQQALPHARAIVLGGGHEIAWATFQGLAQHFLAT 144
Query: 176 ------VDVLHLDAHPDIYDAFE----------GNKYSHASSFARIMEGGYARRLLQVGI 219
+ +++ DAH D+ FE G ++ F + + L V
Sbjct: 145 GVKQPRIGIINFDAHFDL-RTFESELAPVRPSSGTPFNQIHHFCQQQGWDFHYACLGVSR 203
Query: 220 RSITKEGREQGKRFGVEQYEMRTFS--RDRQFLENLK-LGEGVKGVYISVDVDCLDPAFA 276
S T E+ + GV E + FS + L L+ + +Y+++D+D A A
Sbjct: 204 ASNTPALFERADKLGVWYVEDKAFSPLSLKDHLTQLQHFIDDCDYLYLTIDLDVFPAASA 263
Query: 277 PGVSHIEPGGLSFRDVL----NILHNLQADVVAADVVEFNPQRDTVDGMTAMVAAKLVRE 332
PGVS G+S + ILH + ++ AD+ E+NP D +D TA +AA+L +
Sbjct: 264 PGVSAPAARGVSLEALAPYFDRILH-YKNKLMIADIAEYNPSFD-IDQHTARLAARLCWD 321
Query: 333 LTAKISK 339
+ +++
Sbjct: 322 IANAMAE 328
>pdb|3E6V|A Chain A, X-Ray Structure Of Human Arginase I-D183n Mutant: The
Complex With Abh
pdb|3E6V|B Chain B, X-Ray Structure Of Human Arginase I-D183n Mutant: The
Complex With Abh
Length = 322
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 103/242 (42%), Gaps = 49/242 (20%)
Query: 113 DVGDVPVQEI------------RDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSI 160
D GD+P +I R G ++L + E ++++ LVLGGDHS+
Sbjct: 49 DYGDLPFADIPNDSPFQIVKNPRSVGKASEQLAGKVAE-----VKKNGRISLVLGGDHSL 103
Query: 161 SFPVIRA---VSEKLGGPVDVLHLDAHPDIYDAF---EGNKYSHASSFA-RIMEG----- 208
+ I V LG V+ +DAH DI GN + SF + ++G
Sbjct: 104 AIGSISGHARVHPDLG----VIWVDAHTDINTPLTTTSGNLHGQPVSFLLKELKGKIPDV 159
Query: 209 -GY--------ARRLLQVGIRSITKEGREQGKRFGVEQYEMRTFSR---DRQFLENLK-- 254
G+ A+ ++ +G+R + K G++ + M R + E L
Sbjct: 160 PGFSWVTPCISAKDIVYIGLRDVNPGEHYILKTLGIKYFSMTEVDRLGIGKVMEETLSYL 219
Query: 255 LGEGVKGVYISVDVDCLDPAFAPGVSHIEPGGLSFRDVLNILHNLQAD--VVAADVVEFN 312
LG + +++S DVD LDP+F P GGL++R+ L I + + D++E N
Sbjct: 220 LGRKKRPIHLSFDVDGLDPSFTPATGTPVVGGLTYREGLYITEEIYKTGLLSGLDIMEVN 279
Query: 313 PQ 314
P
Sbjct: 280 PS 281
>pdb|3E6K|A Chain A, X-Ray Structure Of Human Arginase I: The Mutant D183a In
Complex With Abh
pdb|3E6K|B Chain B, X-Ray Structure Of Human Arginase I: The Mutant D183a In
Complex With Abh
Length = 322
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 103/242 (42%), Gaps = 49/242 (20%)
Query: 113 DVGDVPVQEI------------RDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSI 160
D GD+P +I R G ++L + E ++++ LVLGGDHS+
Sbjct: 49 DYGDLPFADIPNDSPFQIVKNPRSVGKASEQLAGKVAE-----VKKNGRISLVLGGDHSL 103
Query: 161 SFPVIRA---VSEKLGGPVDVLHLDAHPDIYDAF---EGNKYSHASSFA-RIMEG----- 208
+ I V LG V+ +DAH DI GN + SF + ++G
Sbjct: 104 AIGSISGHARVHPDLG----VIWVDAHTDINTPLTTTSGNLHGQPVSFLLKELKGKIPDV 159
Query: 209 -GY--------ARRLLQVGIRSITKEGREQGKRFGVEQYEMRTFSR---DRQFLENLK-- 254
G+ A+ ++ +G+R + K G++ + M R + E L
Sbjct: 160 PGFSWVTPCISAKDIVYIGLRDVAPGEHYILKTLGIKYFSMTEVDRLGIGKVMEETLSYL 219
Query: 255 LGEGVKGVYISVDVDCLDPAFAPGVSHIEPGGLSFRDVLNILHNLQAD--VVAADVVEFN 312
LG + +++S DVD LDP+F P GGL++R+ L I + + D++E N
Sbjct: 220 LGRKKRPIHLSFDVDGLDPSFTPATGTPVVGGLTYREGLYITEEIYKTGLLSGLDIMEVN 279
Query: 313 PQ 314
P
Sbjct: 280 PS 281
>pdb|1ZPE|A Chain A, Arginase I Covalently Modified With Butylamine At Q19c
pdb|1ZPE|B Chain B, Arginase I Covalently Modified With Butylamine At Q19c
pdb|1ZPE|C Chain C, Arginase I Covalently Modified With Butylamine At Q19c
pdb|1ZPG|A Chain A, Arginase I Covalently Modified With Propylamine At Q19c
pdb|1ZPG|B Chain B, Arginase I Covalently Modified With Propylamine At Q19c
pdb|1ZPG|C Chain C, Arginase I Covalently Modified With Propylamine At Q19c
Length = 314
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 94/220 (42%), Gaps = 31/220 (14%)
Query: 119 VQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDV 178
V+ R G +++L V+ E+ +++ +VLGGDHS++ I ++ + V
Sbjct: 62 VKNPRSVGKANEQLAAVVAET-----QKNGTISVVLGGDHSMAIGSISG-HARVHPDLAV 115
Query: 179 LHLDAHPDIYDAF---EGN---------------KYSHASSFARIMEGGYARRLLQVGIR 220
+ +DAH DI GN K+ F+ + A+ ++ +G+R
Sbjct: 116 IWVDAHTDINTPLTTSSGNLAGQPVAFLLKELKGKFPDVPGFSWVTPAISAKDIVYIGLR 175
Query: 221 SITKEGREQGKRFGVEQYEMRTFSR---DRQFLENLK--LGEGVKGVYISVDVDCLDPAF 275
+ K G++ + M + + E LG + +++S DVD LDP F
Sbjct: 176 DVDPGEHYIIKTLGIKYFSMTEVDKLGIGKVMEETFSYLLGRKKRPIHLSFDVDGLDPVF 235
Query: 276 APGVSHIEPGGLSFRDVLNILHNLQAD--VVAADVVEFNP 313
P GGLS+R+ L I + + D++E NP
Sbjct: 236 TPATGTPVVGGLSYREGLYITEEIYKTGLLSGLDIMEVNP 275
>pdb|1T5G|A Chain A, Arginase-F2-L-Arginine Complex
pdb|1T5G|B Chain B, Arginase-F2-L-Arginine Complex
pdb|1T5G|C Chain C, Arginase-F2-L-Arginine Complex
pdb|1T5F|A Chain A, Arginase I-Aoh Complex
pdb|1T5F|B Chain B, Arginase I-Aoh Complex
pdb|1T5F|C Chain C, Arginase I-Aoh Complex
Length = 314
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 94/220 (42%), Gaps = 31/220 (14%)
Query: 119 VQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDV 178
V+ R G +++L V+ E+ +++ +VLGGDHS++ I ++ + V
Sbjct: 62 VKNPRSVGKANEQLAAVVAET-----QKNGTISVVLGGDHSMAIGSISG-HARVHPDLAV 115
Query: 179 LHLDAHPDIYDAF---EGN---------------KYSHASSFARIMEGGYARRLLQVGIR 220
+ +DAH DI GN K+ F+ + A+ ++ +G+R
Sbjct: 116 IWVDAHTDINTPLTTSSGNLAGQPVAFLLKELKGKFPDVPGFSWVTPAISAKDIVYIGLR 175
Query: 221 SITKEGREQGKRFGVEQYEMRTFSR---DRQFLENLK--LGEGVKGVYISVDVDCLDPAF 275
+ K G++ + M + + E LG + +++S DVD LDP F
Sbjct: 176 DVDPGEHYIIKTLGIKYFSMTEVDKLGIGKVMEETFSYLLGRKKRPIHLSFDVDGLDPVF 235
Query: 276 APGVSHIEPGGLSFRDVLNILHNLQAD--VVAADVVEFNP 313
P GGLS+R+ L I + + D++E NP
Sbjct: 236 TPATGTPVVGGLSYREGLYITEEIYKTGLLSGLDIMEVNP 275
>pdb|4ITY|A Chain A, Crystal Structure Of Leishmania Mexicana Arginase
pdb|4IU0|A Chain A, Crystal Structure Of Leishmania Mexicana Arginase In
Complex With Inhibitor Abh
pdb|4IU1|A Chain A, Crystal Structure Of Leishmania Mexicana Arginase In
Complex With Inhibitor Nor-noha
pdb|4IU4|A Chain A, Crystal Structure Of Leishmania Mexicana Arginase In
Complex With Inhibitor Bec
pdb|4IU5|A Chain A, Crystal Structure Of Leishmania Mexicana Arginase In
Complex With Catalytic Product L-ornithine
Length = 330
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 88/201 (43%), Gaps = 25/201 (12%)
Query: 136 ITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDVLHLDAHPDIYD---AFE 192
I + V+ V E+ PL +GGDHSI+ + V + V+ +DAH DI
Sbjct: 94 IYKCVRRVAEQGRF-PLTIGGDHSIALGTVAGVLS-VHPDAGVIWVDAHADINTMSGTVS 151
Query: 193 GNKYSHASS-------------FARIMEGGYARRLLQVGIRSITKEGREQGKRFGVEQYE 239
GN + S F+ + + ++ +G+R++ E ++ + +
Sbjct: 152 GNLHGCPLSILLGLDRENIPECFSWVPQVLKPNKIAYIGLRAVDDEEKKILHDLNIAAFS 211
Query: 240 MRTFSR---DRQFLENLKL--GEGVKGVYISVDVDCLDPAFAPGVSHIEPGGLSFRDVLN 294
M R D+ ++ +G + V +S DVD +DP + P GGLSFR+ L
Sbjct: 212 MHHVDRYGIDKVVSMAIEAVSPKGTEPVMVSYDVDTIDPLYVPATGTPVRGGLSFREALF 271
Query: 295 ILHNLQ--ADVVAADVVEFNP 313
+ + +VA DVVE NP
Sbjct: 272 LCERIAECGRLVALDVVECNP 292
>pdb|3E8Q|A Chain A, X-Ray Structure Of Rat Arginase I-T135a: The Unliganded
Complex
pdb|3E8Q|B Chain B, X-Ray Structure Of Rat Arginase I-T135a: The Unliganded
Complex
pdb|3E8Q|C Chain C, X-Ray Structure Of Rat Arginase I-T135a: The Unliganded
Complex
pdb|3E9B|A Chain A, X-Ray Structure Of Rat Arginase I-T135a Mutant: The
Complex With Bec
pdb|3E9B|B Chain B, X-Ray Structure Of Rat Arginase I-T135a Mutant: The
Complex With Bec
pdb|3E9B|C Chain C, X-Ray Structure Of Rat Arginase I-T135a Mutant: The
Complex With Bec
Length = 323
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 95/220 (43%), Gaps = 31/220 (14%)
Query: 119 VQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDV 178
V+ R G +++L V+ E+ +++ +VLGGDHS++ I ++ + V
Sbjct: 67 VKNPRSVGKANEQLAAVVAET-----QKNGTISVVLGGDHSMAIGSISG-HARVHPDLCV 120
Query: 179 LHLDAHPDI---YDAFEGN---------------KYSHASSFARIMEGGYARRLLQVGIR 220
+ +DAH DI A GN K+ F+ + A+ ++ +G+R
Sbjct: 121 IWVDAHTDINTPLTASSGNLHGQPVAFLLKELKGKFPDVPGFSWVTPCISAKDIVYIGLR 180
Query: 221 SITKEGREQGKRFGVEQYEMRTFSR---DRQFLENLK--LGEGVKGVYISVDVDCLDPAF 275
+ K G++ + M + + E LG + +++S DVD LDP F
Sbjct: 181 DVDPGEHYIIKTLGIKYFSMTEVDKLGIGKVMEETFSYLLGRKKRPIHLSFDVDGLDPVF 240
Query: 276 APGVSHIEPGGLSFRDVLNILHNLQAD--VVAADVVEFNP 313
P GGLS+R+ L I + + D++E NP
Sbjct: 241 TPATGTPVVGGLSYREGLYITEEIYKTGLLSGLDIMEVNP 280
>pdb|1WVA|A Chain A, Crystal Structure Of Human Arginase I From Twinned Crystal
pdb|1WVA|B Chain B, Crystal Structure Of Human Arginase I From Twinned Crystal
pdb|2AEB|A Chain A, Crystal Structure Of Human Arginase I At 1.29 A Resolution
And Exploration Of Inhibition In Immune Response.
pdb|2AEB|B Chain B, Crystal Structure Of Human Arginase I At 1.29 A Resolution
And Exploration Of Inhibition In Immune Response.
pdb|2PHA|A Chain A, Crystal Structure Of Native, Unliganded Human Arginase At
1.90 Resolution
pdb|2PHA|B Chain B, Crystal Structure Of Native, Unliganded Human Arginase At
1.90 Resolution
pdb|2PHO|A Chain A, Crystal Structure Of Human Arginase I Complexed With
Thiosemicarbazide At 1.95 Resolution
pdb|2PHO|B Chain B, Crystal Structure Of Human Arginase I Complexed With
Thiosemicarbazide At 1.95 Resolution
pdb|2PLL|A Chain A, Crystal Structure Of Perdeuterated Human Arginase I
pdb|2PLL|B Chain B, Crystal Structure Of Perdeuterated Human Arginase I
pdb|2ZAV|A Chain A, Arginase I (homo Sapiens): Native And Unliganded Structure
At 1.70 A Resolution
pdb|2ZAV|B Chain B, Arginase I (homo Sapiens): Native And Unliganded Structure
At 1.70 A Resolution
pdb|3DJ8|A Chain A, Synthesis Of (2s)-2-Amino-7,8-Epoxyoctanoic Acid And
Structure Of Its Metal-Bridging Complex With Human
Arginase I
pdb|3DJ8|B Chain B, Synthesis Of (2s)-2-Amino-7,8-Epoxyoctanoic Acid And
Structure Of Its Metal-Bridging Complex With Human
Arginase I
pdb|3F80|A Chain A, (S)-2-Amino-6-Nitrohexanoic Acid Binds To Human Arginase I
Through Multiple Nitro-Metal Coordination Interactions
In The Binuclear Manganese Cluster. Resolution 1.60 A.
pdb|3F80|B Chain B, (S)-2-Amino-6-Nitrohexanoic Acid Binds To Human Arginase I
Through Multiple Nitro-Metal Coordination Interactions
In The Binuclear Manganese Cluster. Resolution 1.60 A.
pdb|3KV2|A Chain A, High Resolution Structure Of Human Arginase I In Complex
With The Strong Inhibitor
N(Omega)-Hydroxy-Nor-L-Arginine (Nor-Noha)
pdb|3KV2|B Chain B, High Resolution Structure Of Human Arginase I In Complex
With The Strong Inhibitor
N(Omega)-Hydroxy-Nor-L-Arginine (Nor-Noha)
pdb|3GMZ|A Chain A, Crystal Of Human Arginase In Complex With L-Ornithine.
Resolution 1.43 A.
pdb|3GMZ|B Chain B, Crystal Of Human Arginase In Complex With L-Ornithine.
Resolution 1.43 A.
pdb|3GN0|A Chain A, Crystal Structure Of Human Arginase I In Complex With
Difluoromethylornithine (Dfmo)
pdb|3GN0|B Chain B, Crystal Structure Of Human Arginase I In Complex With
Difluoromethylornithine (Dfmo)
pdb|3LP4|A Chain A, Crystal Structure Of Human Arginase I In Complex With
L-Lysi Resolution.
pdb|3LP4|B Chain B, Crystal Structure Of Human Arginase I In Complex With
L-Lysi Resolution.
pdb|3LP7|A Chain A, Crystal Structure Of Human Arginase I In Complex With
Inhibi N(Omega)-Hydroxy-L-Arginine (Noha), 2.04a
Resolution
pdb|3LP7|B Chain B, Crystal Structure Of Human Arginase I In Complex With
Inhibi N(Omega)-Hydroxy-L-Arginine (Noha), 2.04a
Resolution
pdb|3MFV|A Chain A, Crystal Structure Of Human Arginase I In Complex With 2-
Aminohomohistidine
pdb|3MFV|B Chain B, Crystal Structure Of Human Arginase I In Complex With 2-
Aminohomohistidine
pdb|3MFW|A Chain A, Crystal Structure Of Human Arginase I In Complex With L-2-
Aminohistidine And Sulphate
pdb|3MFW|B Chain B, Crystal Structure Of Human Arginase I In Complex With L-2-
Aminohistidine And Sulphate
pdb|3MJL|A Chain A, Crystal Structure Of Human Arginase I In Complex With 2-
Aminoimidazole. Resolution 1.90 A.
pdb|3MJL|B Chain B, Crystal Structure Of Human Arginase I In Complex With 2-
Aminoimidazole. Resolution 1.90 A.
pdb|3SJT|A Chain A, Crystal Structure Of Human Arginase I In Complex With The
Inhibitor Me-Abh, Resolution 1.60 A, Twinned Structure
pdb|3SJT|B Chain B, Crystal Structure Of Human Arginase I In Complex With The
Inhibitor Me-Abh, Resolution 1.60 A, Twinned Structure
pdb|3SKK|A Chain A, Crystal Structure Of Human Arginase I In Complex With The
Inhibitor Fabh, Resolution 1.70 A, Twinned Structure
pdb|3SKK|B Chain B, Crystal Structure Of Human Arginase I In Complex With The
Inhibitor Fabh, Resolution 1.70 A, Twinned Structure
pdb|3TF3|A Chain A, Crystal Structure Of Metal-Free Human Arginase I
pdb|3TF3|B Chain B, Crystal Structure Of Metal-Free Human Arginase I
pdb|3TH7|A Chain A, Crystal Structure Of Unliganded Co2+2-Hai (Ph 7.0)
pdb|3TH7|B Chain B, Crystal Structure Of Unliganded Co2+2-Hai (Ph 7.0)
pdb|3THE|A Chain A, Crystal Structure Of Co2+2-Hai (Ph 8.5)
pdb|3THE|B Chain B, Crystal Structure Of Co2+2-Hai (Ph 8.5)
pdb|3THH|A Chain A, Crystal Structure Of The Co2+2-Hai-Abh Complex
pdb|3THH|B Chain B, Crystal Structure Of The Co2+2-Hai-Abh Complex
pdb|3THJ|A Chain A, Crystal Structure Of The Co2+2-Hai-L-Orn Complex
pdb|3THJ|B Chain B, Crystal Structure Of The Co2+2-Hai-L-Orn Complex
pdb|4FCI|A Chain A, Crystal Structure Of The Mn2+2-human Arginase I-agpa
Complex
pdb|4FCI|B Chain B, Crystal Structure Of The Mn2+2-human Arginase I-agpa
Complex
pdb|4FCK|A Chain A, Crystal Structure Of The Co2+2-human Arginase I-agpa
Complex
pdb|4FCK|B Chain B, Crystal Structure Of The Co2+2-human Arginase I-agpa
Complex
pdb|4GSM|A Chain A, Crystal Structure Of Ni2+2-Human Arginase I
pdb|4GSM|B Chain B, Crystal Structure Of Ni2+2-Human Arginase I
pdb|4GSV|A Chain A, Crystal Structure Of The Ni2+2-Human Arginase I-Abh
Complex
pdb|4GSV|B Chain B, Crystal Structure Of The Ni2+2-Human Arginase I-Abh
Complex
pdb|4GSZ|A Chain A, Crystal Structure Of The Zn2+5-Human Arginase I-Abh
Complex
pdb|4GSZ|B Chain B, Crystal Structure Of The Zn2+5-Human Arginase I-Abh
Complex
pdb|4GWC|A Chain A, Crystal Structure Of Mn2+2,Zn2+-Human Arginase I
pdb|4GWC|B Chain B, Crystal Structure Of Mn2+2,Zn2+-Human Arginase I
pdb|4GWD|A Chain A, Crystal Structure Of The Mn2+2,Zn2+-Human Arginase I-Abh
Complex
pdb|4GWD|B Chain B, Crystal Structure Of The Mn2+2,Zn2+-Human Arginase I-Abh
Complex
Length = 322
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 85/191 (44%), Gaps = 32/191 (16%)
Query: 152 LVLGGDHSISFPVIRA---VSEKLGGPVDVLHLDAHPDIYDAF---EGNKYSHASSFA-R 204
LVLGGDHS++ I V LG V+ +DAH DI GN + SF +
Sbjct: 95 LVLGGDHSLAIGSISGHARVHPDLG----VIWVDAHTDINTPLTTTSGNLHGQPVSFLLK 150
Query: 205 IMEG------GY--------ARRLLQVGIRSITKEGREQGKRFGVEQYEMRTFSR---DR 247
++G G+ A+ ++ +G+R + K G++ + M R +
Sbjct: 151 ELKGKIPDVPGFSWVTPCISAKDIVYIGLRDVDPGEHYILKTLGIKYFSMTEVDRLGIGK 210
Query: 248 QFLENLK--LGEGVKGVYISVDVDCLDPAFAPGVSHIEPGGLSFRDVLNILHNLQAD--V 303
E L LG + +++S DVD LDP+F P GGL++R+ L I + +
Sbjct: 211 VMEETLSYLLGRKKRPIHLSFDVDGLDPSFTPATGTPVVGGLTYREGLYITEEIYKTGLL 270
Query: 304 VAADVVEFNPQ 314
D++E NP
Sbjct: 271 SGLDIMEVNPS 281
>pdb|1WVB|A Chain A, Crystal Structure Of Human Arginase I: The Mutant E256q
pdb|1WVB|B Chain B, Crystal Structure Of Human Arginase I: The Mutant E256q
Length = 322
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 84/191 (43%), Gaps = 32/191 (16%)
Query: 152 LVLGGDHSISFPVIRA---VSEKLGGPVDVLHLDAHPDIYDAF---EGNKYSHASSFA-R 204
LVLGGDHS++ I V LG V+ +DAH DI GN + SF +
Sbjct: 95 LVLGGDHSLAIGSISGHARVHPDLG----VIWVDAHTDINTPLTTTSGNLHGQPVSFLLK 150
Query: 205 IMEG------GY--------ARRLLQVGIRSITKEGREQGKRFGVEQYEMRTFSR---DR 247
++G G+ A+ ++ +G+R + K G++ + M R +
Sbjct: 151 ELKGKIPDVPGFSWVTPCISAKDIVYIGLRDVDPGEHYILKTLGIKYFSMTEVDRLGIGK 210
Query: 248 QFLENLK--LGEGVKGVYISVDVDCLDPAFAPGVSHIEPGGLSFRDVLNILHNLQAD--V 303
E L LG + +++S DVD LDP+F P GGL++R L I + +
Sbjct: 211 VMEETLSYLLGRKKRPIHLSFDVDGLDPSFTPATGTPVVGGLTYRQGLYITEEIYKTGLL 270
Query: 304 VAADVVEFNPQ 314
D++E NP
Sbjct: 271 SGLDIMEVNPS 281
>pdb|1HQG|A Chain A, Crystal Structure Of The H141c Arginase Variant Complexed
With Products Ornithine And Urea
pdb|1HQG|B Chain B, Crystal Structure Of The H141c Arginase Variant Complexed
With Products Ornithine And Urea
pdb|1HQG|C Chain C, Crystal Structure Of The H141c Arginase Variant Complexed
With Products Ornithine And Urea
Length = 323
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 94/220 (42%), Gaps = 31/220 (14%)
Query: 119 VQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDV 178
V+ R G +++L V+ E+ +++ +VLGGDHS++ I ++ + V
Sbjct: 67 VKNPRSVGKANEQLAAVVAET-----QKNGTISVVLGGDHSMAIGSISG-HARVHPDLCV 120
Query: 179 LHLDAHPDIYDAF---EGN---------------KYSHASSFARIMEGGYARRLLQVGIR 220
+ +DAH DI GN K+ F+ + A+ ++ +G+R
Sbjct: 121 IWVDAHTDINTPLTTSSGNLXGQPVAFLLKELKGKFPDVPGFSWVTPCISAKDIVYIGLR 180
Query: 221 SITKEGREQGKRFGVEQYEMRTFSR---DRQFLENLK--LGEGVKGVYISVDVDCLDPAF 275
+ K G++ + M + + E LG + +++S DVD LDP F
Sbjct: 181 DVDPGEHYIIKTLGIKYFSMTEVDKLGIGKVMEETFSYLLGRKKRPIHLSFDVDGLDPVF 240
Query: 276 APGVSHIEPGGLSFRDVLNILHNLQAD--VVAADVVEFNP 313
P GGLS+R+ L I + + D++E NP
Sbjct: 241 TPATGTPVVGGLSYREGLYITEEIYKTGLLSGLDIMEVNP 280
>pdb|3E8Z|A Chain A, X-Ray Structure Of Rat Arginase I-N130a Mutant: The
Unliganded Complex
pdb|3E8Z|B Chain B, X-Ray Structure Of Rat Arginase I-N130a Mutant: The
Unliganded Complex
pdb|3E8Z|C Chain C, X-Ray Structure Of Rat Arginase I-N130a Mutant: The
Unliganded Complex
Length = 323
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 94/220 (42%), Gaps = 31/220 (14%)
Query: 119 VQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDV 178
V+ R G +++L V+ E+ +++ +VLGGDHS++ I ++ + V
Sbjct: 67 VKNPRSVGKANEQLAAVVAET-----QKNGTISVVLGGDHSMAIGSISG-HARVHPDLCV 120
Query: 179 LHLDAHPDIYDAF---EGN---------------KYSHASSFARIMEGGYARRLLQVGIR 220
+ +DAH DI GN K+ F+ + A+ ++ +G+R
Sbjct: 121 IWVDAHTDIATPLTTSSGNLHGQPVAFLLKELKGKFPDVPGFSWVTPCISAKDIVYIGLR 180
Query: 221 SITKEGREQGKRFGVEQYEMRTFSR---DRQFLENLK--LGEGVKGVYISVDVDCLDPAF 275
+ K G++ + M + + E LG + +++S DVD LDP F
Sbjct: 181 DVDPGEHYIIKTLGIKYFSMTEVDKLGIGKVMEETFSYLLGRKKRPIHLSFDVDGLDPVF 240
Query: 276 APGVSHIEPGGLSFRDVLNILHNLQAD--VVAADVVEFNP 313
P GGLS+R+ L I + + D++E NP
Sbjct: 241 TPATGTPVVGGLSYREGLYITEEIYKTGLLSGLDIMEVNP 280
>pdb|1TBJ|A Chain A, H141a Mutant Of Rat Liver Arginase I
pdb|1TBJ|B Chain B, H141a Mutant Of Rat Liver Arginase I
pdb|1TBJ|C Chain C, H141a Mutant Of Rat Liver Arginase I
Length = 314
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 94/220 (42%), Gaps = 31/220 (14%)
Query: 119 VQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDV 178
V+ R G +++L V+ E+ +++ +VLGGDHS++ I ++ + V
Sbjct: 62 VKNPRSVGKANEQLAAVVAET-----QKNGTISVVLGGDHSMAIGSISG-HARVHPDLCV 115
Query: 179 LHLDAHPDIYDAF---EGN---------------KYSHASSFARIMEGGYARRLLQVGIR 220
+ +DAH DI GN K+ F+ + A+ ++ +G+R
Sbjct: 116 IWVDAHTDINTPLTTSSGNLAGQPVAFLLKELKGKFPDVPGFSWVTPCISAKDIVYIGLR 175
Query: 221 SITKEGREQGKRFGVEQYEMRTFSR---DRQFLENLK--LGEGVKGVYISVDVDCLDPAF 275
+ K G++ + M + + E LG + +++S DVD LDP F
Sbjct: 176 DVDPGEHYIIKTLGIKYFSMTEVDKLGIGKVMEETFSYLLGRKKRPIHLSFDVDGLDPVF 235
Query: 276 APGVSHIEPGGLSFRDVLNILHNLQAD--VVAADVVEFNP 313
P GGLS+R+ L I + + D++E NP
Sbjct: 236 TPATGTPVVGGLSYREGLYITEEIYKTGLLSGLDIMEVNP 275
>pdb|1HQX|A Chain A, R308k Arginase Variant
pdb|1HQX|B Chain B, R308k Arginase Variant
pdb|1HQX|C Chain C, R308k Arginase Variant
Length = 323
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 94/220 (42%), Gaps = 31/220 (14%)
Query: 119 VQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDV 178
V+ R G +++L V+ E+ +++ +VLGGDHS++ I ++ + V
Sbjct: 67 VKNPRSVGKANEQLAAVVAET-----QKNGTISVVLGGDHSMAIGSISG-HARVHPDLCV 120
Query: 179 LHLDAHPDIYDAF---EGN---------------KYSHASSFARIMEGGYARRLLQVGIR 220
+ +DAH DI GN K+ F+ + A+ ++ +G+R
Sbjct: 121 IWVDAHTDINTPLTTSSGNLHGQPVAFLLKELKGKFPDVPGFSWVTPCISAKDIVYIGLR 180
Query: 221 SITKEGREQGKRFGVEQYEMRTFSR---DRQFLENLK--LGEGVKGVYISVDVDCLDPAF 275
+ K G++ + M + + E LG + +++S DVD LDP F
Sbjct: 181 DVDPGEHYIIKTLGIKYFSMTEVDKLGIGKVMEETFSYLLGRKKRPIHLSFDVDGLDPVF 240
Query: 276 APGVSHIEPGGLSFRDVLNILHNLQAD--VVAADVVEFNP 313
P GGLS+R+ L I + + D++E NP
Sbjct: 241 TPATGTPVVGGLSYREGLYITEEIYKTGLLSGLDIMEVNP 280
>pdb|1RLA|A Chain A, Three-Dimensional Structure Of Rat Liver Arginase, The
Binuclear Manganese Metalloenzyme Of The Urea Cycle
pdb|1RLA|B Chain B, Three-Dimensional Structure Of Rat Liver Arginase, The
Binuclear Manganese Metalloenzyme Of The Urea Cycle
pdb|1RLA|C Chain C, Three-Dimensional Structure Of Rat Liver Arginase, The
Binuclear Manganese Metalloenzyme Of The Urea Cycle
pdb|1D3V|A Chain A, Crystal Structure Of The Binuclear Manganese Metalloenzyme
Arginase Complexed With 2(S)-Amino-6-Boronohexanoic
Acid, An L-Arginine Analog
pdb|1D3V|B Chain B, Crystal Structure Of The Binuclear Manganese Metalloenzyme
Arginase Complexed With 2(S)-Amino-6-Boronohexanoic
Acid, An L-Arginine Analog
pdb|1HQ5|A Chain A, Crystal Structure Of The Binuclear Manganese Metalloenzyme
Arginase Complexed With S-(2-Boronoethyl)-L-Cysteine, An
L-Arginine Analogue
pdb|1HQ5|B Chain B, Crystal Structure Of The Binuclear Manganese Metalloenzyme
Arginase Complexed With S-(2-Boronoethyl)-L-Cysteine, An
L-Arginine Analogue
pdb|1HQF|A Chain A, Crystal Structure Of The Binuclear Manganese Metalloenzyme
Arginase Complexed With N-Hydroxy-L-Arginine
pdb|1HQF|B Chain B, Crystal Structure Of The Binuclear Manganese Metalloenzyme
Arginase Complexed With N-Hydroxy-L-Arginine
pdb|1HQF|C Chain C, Crystal Structure Of The Binuclear Manganese Metalloenzyme
Arginase Complexed With N-Hydroxy-L-Arginine
pdb|1HQH|A Chain A, Crystal Structure Of The Binuclear Manganese Metalloenzyme
Arginase Complexed With Nor-N-Hydroxy-L-Arginine
pdb|1HQH|B Chain B, Crystal Structure Of The Binuclear Manganese Metalloenzyme
Arginase Complexed With Nor-N-Hydroxy-L-Arginine
pdb|1HQH|C Chain C, Crystal Structure Of The Binuclear Manganese Metalloenzyme
Arginase Complexed With Nor-N-Hydroxy-L-Arginine
pdb|1R1O|A Chain A, Amino Acid Sulfonamides As Transition-State Analogue
Inhibitors Of Arginase
pdb|1R1O|B Chain B, Amino Acid Sulfonamides As Transition-State Analogue
Inhibitors Of Arginase
pdb|1R1O|C Chain C, Amino Acid Sulfonamides As Transition-State Analogue
Inhibitors Of Arginase
Length = 323
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 94/220 (42%), Gaps = 31/220 (14%)
Query: 119 VQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDV 178
V+ R G +++L V+ E+ +++ +VLGGDHS++ I ++ + V
Sbjct: 67 VKNPRSVGKANEQLAAVVAET-----QKNGTISVVLGGDHSMAIGSISG-HARVHPDLCV 120
Query: 179 LHLDAHPDIYDAF---EGN---------------KYSHASSFARIMEGGYARRLLQVGIR 220
+ +DAH DI GN K+ F+ + A+ ++ +G+R
Sbjct: 121 IWVDAHTDINTPLTTSSGNLHGQPVAFLLKELKGKFPDVPGFSWVTPCISAKDIVYIGLR 180
Query: 221 SITKEGREQGKRFGVEQYEMRTFSR---DRQFLENLK--LGEGVKGVYISVDVDCLDPAF 275
+ K G++ + M + + E LG + +++S DVD LDP F
Sbjct: 181 DVDPGEHYIIKTLGIKYFSMTEVDKLGIGKVMEETFSYLLGRKKRPIHLSFDVDGLDPVF 240
Query: 276 APGVSHIEPGGLSFRDVLNILHNLQAD--VVAADVVEFNP 313
P GGLS+R+ L I + + D++E NP
Sbjct: 241 TPATGTPVVGGLSYREGLYITEEIYKTGLLSGLDIMEVNP 280
>pdb|1TA1|A Chain A, H141c Mutant Of Rat Liver Arginase I
pdb|1TA1|B Chain B, H141c Mutant Of Rat Liver Arginase I
pdb|1TA1|C Chain C, H141c Mutant Of Rat Liver Arginase I
Length = 314
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 94/220 (42%), Gaps = 31/220 (14%)
Query: 119 VQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDV 178
V+ R G +++L V+ E+ +++ +VLGGDHS++ I ++ + V
Sbjct: 62 VKNPRSVGKANEQLAAVVAET-----QKNGTISVVLGGDHSMAIGSISG-HARVHPDLCV 115
Query: 179 LHLDAHPDIYDAF---EGN---------------KYSHASSFARIMEGGYARRLLQVGIR 220
+ +DAH DI GN K+ F+ + A+ ++ +G+R
Sbjct: 116 IWVDAHTDINTPLTTSSGNLCGQPVAFLLKELKGKFPDVPGFSWVTPCISAKDIVYIGLR 175
Query: 221 SITKEGREQGKRFGVEQYEMRTFSR---DRQFLENLK--LGEGVKGVYISVDVDCLDPAF 275
+ K G++ + M + + E LG + +++S DVD LDP F
Sbjct: 176 DVDPGEHYIIKTLGIKYFSMTEVDKLGIGKVMEETFSYLLGRKKRPIHLSFDVDGLDPVF 235
Query: 276 APGVSHIEPGGLSFRDVLNILHNLQAD--VVAADVVEFNP 313
P GGLS+R+ L I + + D++E NP
Sbjct: 236 TPATGTPVVGGLSYREGLYITEEIYKTGLLSGLDIMEVNP 275
>pdb|1TBH|A Chain A, H141d Mutant Of Rat Liver Arginase I
pdb|1TBH|B Chain B, H141d Mutant Of Rat Liver Arginase I
pdb|1TBH|C Chain C, H141d Mutant Of Rat Liver Arginase I
Length = 314
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 94/220 (42%), Gaps = 31/220 (14%)
Query: 119 VQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDV 178
V+ R G +++L V+ E+ +++ +VLGGDHS++ I ++ + V
Sbjct: 62 VKNPRSVGKANEQLAAVVAET-----QKNGTISVVLGGDHSMAIGSISG-HARVHPDLCV 115
Query: 179 LHLDAHPDIYDAF---EGN---------------KYSHASSFARIMEGGYARRLLQVGIR 220
+ +DAH DI GN K+ F+ + A+ ++ +G+R
Sbjct: 116 IWVDAHTDINTPLTTSSGNLDGQPVAFLLKELKGKFPDVPGFSWVTPCISAKDIVYIGLR 175
Query: 221 SITKEGREQGKRFGVEQYEMRTFSR---DRQFLENLK--LGEGVKGVYISVDVDCLDPAF 275
+ K G++ + M + + E LG + +++S DVD LDP F
Sbjct: 176 DVDPGEHYIIKTLGIKYFSMTEVDKLGIGKVMEETFSYLLGRKKRPIHLSFDVDGLDPVF 235
Query: 276 APGVSHIEPGGLSFRDVLNILHNLQAD--VVAADVVEFNP 313
P GGLS+R+ L I + + D++E NP
Sbjct: 236 TPATGTPVVGGLSYREGLYITEEIYKTGLLSGLDIMEVNP 275
>pdb|1TBL|A Chain A, H141n Mutant Of Rat Liver Arginase I
pdb|1TBL|B Chain B, H141n Mutant Of Rat Liver Arginase I
pdb|1TBL|C Chain C, H141n Mutant Of Rat Liver Arginase I
Length = 314
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 94/220 (42%), Gaps = 31/220 (14%)
Query: 119 VQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDV 178
V+ R G +++L V+ E+ +++ +VLGGDHS++ I ++ + V
Sbjct: 62 VKNPRSVGKANEQLAAVVAET-----QKNGTISVVLGGDHSMAIGSISG-HARVHPDLCV 115
Query: 179 LHLDAHPDIYDAF---EGN---------------KYSHASSFARIMEGGYARRLLQVGIR 220
+ +DAH DI GN K+ F+ + A+ ++ +G+R
Sbjct: 116 IWVDAHTDINTPLTTSSGNLNGQPVAFLLKELKGKFPDVPGFSWVTPCISAKDIVYIGLR 175
Query: 221 SITKEGREQGKRFGVEQYEMRTFSR---DRQFLENLK--LGEGVKGVYISVDVDCLDPAF 275
+ K G++ + M + + E LG + +++S DVD LDP F
Sbjct: 176 DVDPGEHYIIKTLGIKYFSMTEVDKLGIGKVMEETFSYLLGRKKRPIHLSFDVDGLDPVF 235
Query: 276 APGVSHIEPGGLSFRDVLNILHNLQAD--VVAADVVEFNP 313
P GGLS+R+ L I + + D++E NP
Sbjct: 236 TPATGTPVVGGLSYREGLYITEEIYKTGLLSGLDIMEVNP 275
>pdb|1T4S|A Chain A, Arginase-L-Valine Complex
pdb|1T4S|B Chain B, Arginase-L-Valine Complex
pdb|1T4S|C Chain C, Arginase-L-Valine Complex
pdb|1T4P|A Chain A, Arginase-Dehydro-Abh Complex
pdb|1T4P|B Chain B, Arginase-Dehydro-Abh Complex
pdb|1T4P|C Chain C, Arginase-Dehydro-Abh Complex
pdb|1T4R|A Chain A, Arginase-descarboxy-nor-noha Complex
pdb|1T4R|B Chain B, Arginase-descarboxy-nor-noha Complex
pdb|1T4R|C Chain C, Arginase-descarboxy-nor-noha Complex
pdb|1T4T|A Chain A, Arginase-Dinor-Noha Complex
pdb|1T4T|B Chain B, Arginase-Dinor-Noha Complex
pdb|1T4T|C Chain C, Arginase-Dinor-Noha Complex
Length = 314
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 94/220 (42%), Gaps = 31/220 (14%)
Query: 119 VQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDV 178
V+ R G +++L V+ E+ +++ +VLGGDHS++ I ++ + V
Sbjct: 62 VKNPRSVGKANEQLAAVVAET-----QKNGTISVVLGGDHSMAIGSISG-HARVHPDLCV 115
Query: 179 LHLDAHPDIYDAF---EGN---------------KYSHASSFARIMEGGYARRLLQVGIR 220
+ +DAH DI GN K+ F+ + A+ ++ +G+R
Sbjct: 116 IWVDAHTDINTPLTTSSGNLHGQPVAFLLKELKGKFPDVPGFSWVTPCISAKDIVYIGLR 175
Query: 221 SITKEGREQGKRFGVEQYEMRTFSR---DRQFLENLK--LGEGVKGVYISVDVDCLDPAF 275
+ K G++ + M + + E LG + +++S DVD LDP F
Sbjct: 176 DVDPGEHYIIKTLGIKYFSMTEVDKLGIGKVMEETFSYLLGRKKRPIHLSFDVDGLDPVF 235
Query: 276 APGVSHIEPGGLSFRDVLNILHNLQAD--VVAADVVEFNP 313
P GGLS+R+ L I + + D++E NP
Sbjct: 236 TPATGTPVVGGLSYREGLYITEEIYKTGLLSGLDIMEVNP 275
>pdb|2RLA|A Chain A, Altering The Binuclear Manganese Cluster Of Arginase
Diminishes Thermostability And Catalytic Function
pdb|2RLA|B Chain B, Altering The Binuclear Manganese Cluster Of Arginase
Diminishes Thermostability And Catalytic Function
pdb|2RLA|C Chain C, Altering The Binuclear Manganese Cluster Of Arginase
Diminishes Thermostability And Catalytic Function
Length = 323
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 94/220 (42%), Gaps = 31/220 (14%)
Query: 119 VQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDV 178
V+ R G +++L V+ E+ +++ +VLGGDHS++ I ++ + V
Sbjct: 67 VKNPRSVGKANEQLAAVVAET-----QKNGTISVVLGGDHSMAIGSISG-HARVHPDLCV 120
Query: 179 LHLDAHPDIYDAF---EGN---------------KYSHASSFARIMEGGYARRLLQVGIR 220
+ +DAH DI GN K+ F+ + A+ ++ +G+R
Sbjct: 121 IWVDAHTDINTPLTTSSGNLHGQPVAFLLKELKGKFPDVPGFSWVTPCISAKDIVYIGLR 180
Query: 221 SITKEGREQGKRFGVEQYEMRTFSR---DRQFLENLK--LGEGVKGVYISVDVDCLDPAF 275
+ K G++ + M + + E LG + +++S DVD LDP F
Sbjct: 181 DVDPGEHYIIKTLGIKYFSMTEVDKLGIGKVMEETFSYLLGRKKRPIHLSFDVDGLDPVF 240
Query: 276 APGVSHIEPGGLSFRDVLNILHNLQAD--VVAADVVEFNP 313
P GGLS+R+ L I + + D++E NP
Sbjct: 241 TPATGTPVVGGLSYREGLYITEEIYKTGLLSGLDIMEVNP 280
>pdb|1P8O|A Chain A, Structural And Functional Importance Of First-Shell Metal
Ligands In The Binuclear Manganese Cluster Of Arginase
I.
pdb|1P8O|B Chain B, Structural And Functional Importance Of First-Shell Metal
Ligands In The Binuclear Manganese Cluster Of Arginase
I.
pdb|1P8O|C Chain C, Structural And Functional Importance Of First-Shell Metal
Ligands In The Binuclear Manganese Cluster Of Arginase I
Length = 314
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 94/220 (42%), Gaps = 31/220 (14%)
Query: 119 VQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDV 178
V+ R G +++L V+ E+ +++ +VLGGDHS++ I ++ + V
Sbjct: 62 VKNPRSVGKANEQLAAVVAET-----QKNGTISVVLGGDHSMAIGSISG-HARVHPDLCV 115
Query: 179 LHLDAHPDIYDAF---EGN---------------KYSHASSFARIMEGGYARRLLQVGIR 220
+ +DAH +I GN K+ F+ + A+ ++ +G+R
Sbjct: 116 IWVDAHTNINTPLTTSSGNLHGQPVAFLLKELKGKFPDVPGFSWVTPCISAKDIVYIGLR 175
Query: 221 SITKEGREQGKRFGVEQYEMRTFSR---DRQFLENLK--LGEGVKGVYISVDVDCLDPAF 275
+ K G++ + M + + E LG + +++S DVD LDP F
Sbjct: 176 DVDPGEHYIIKTLGIKYFSMTEVDKLGIGKVMEETFSYLLGRKKRPIHLSFDVDGLDPVF 235
Query: 276 APGVSHIEPGGLSFRDVLNILHNLQAD--VVAADVVEFNP 313
P GGLS+R+ L I + + D++E NP
Sbjct: 236 TPATGTPVVGGLSYREGLYITEEIYKTGLLSGLDIMEVNP 275
>pdb|1P8Q|A Chain A, Structural And Functional Importance Of First-Shell Metal
Ligands In The Binuclear Cluster Of Arginase I.
pdb|1P8Q|B Chain B, Structural And Functional Importance Of First-Shell Metal
Ligands In The Binuclear Cluster Of Arginase I.
pdb|1P8Q|C Chain C, Structural And Functional Importance Of First-Shell Metal
Ligands In The Binuclear Cluster Of Arginase I
Length = 314
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 94/220 (42%), Gaps = 31/220 (14%)
Query: 119 VQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDV 178
V+ R G +++L V+ E+ +++ +VLGGDHS++ I ++ + V
Sbjct: 62 VKNPRSVGKANEQLAAVVAET-----QKNGTISVVLGGDHSMAIGSISG-HARVHPDLCV 115
Query: 179 LHLDAHPDIYDAF---EGN---------------KYSHASSFARIMEGGYARRLLQVGIR 220
+ +DAH DI GN K+ F+ + A+ ++ +G+R
Sbjct: 116 IWVDAHTDINTPLTTSSGNLHGQPVAFLLKELKGKFPDVPGFSWVTPCISAKDIVYIGLR 175
Query: 221 SITKEGREQGKRFGVEQYEMRTFSR---DRQFLENLK--LGEGVKGVYISVDVDCLDPAF 275
+ K G++ + M + + E LG + +++S DV+ LDP F
Sbjct: 176 DVDPGEHYIIKTLGIKYFSMTEVDKLGIGKVMEETFSYLLGRKKRPIHLSFDVEGLDPVF 235
Query: 276 APGVSHIEPGGLSFRDVLNILHNLQAD--VVAADVVEFNP 313
P GGLS+R+ L I + + D++E NP
Sbjct: 236 TPATGTPVVGGLSYREGLYITEEIYKTGLLSGLDIMEVNP 275
>pdb|1P8M|A Chain A, Structural And Functional Importance Of First-shell Metal
Ligands In The Binuclear Manganese Cluster Of Arginase
I.
pdb|1P8M|B Chain B, Structural And Functional Importance Of First-shell Metal
Ligands In The Binuclear Manganese Cluster Of Arginase
I.
pdb|1P8M|C Chain C, Structural And Functional Importance Of First-shell Metal
Ligands In The Binuclear Manganese Cluster Of Arginase I
Length = 314
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 94/220 (42%), Gaps = 31/220 (14%)
Query: 119 VQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDV 178
V+ R G +++L V+ E+ +++ +VLGGDHS++ I ++ + V
Sbjct: 62 VKNPRSVGKANEQLAAVVAET-----QKNGTISVVLGGDHSMAIGSISG-HARVHPDLCV 115
Query: 179 LHLDAHPDIYDAF---EGN---------------KYSHASSFARIMEGGYARRLLQVGIR 220
+ +DAH +I GN K+ F+ + A+ ++ +G+R
Sbjct: 116 IWVDAHTEINTPLTTSSGNLHGQPVAFLLKELKGKFPDVPGFSWVTPCISAKDIVYIGLR 175
Query: 221 SITKEGREQGKRFGVEQYEMRTFSR---DRQFLENLK--LGEGVKGVYISVDVDCLDPAF 275
+ K G++ + M + + E LG + +++S DVD LDP F
Sbjct: 176 DVDPGEHYIIKTLGIKYFSMTEVDKLGIGKVMEETFSYLLGRKKRPIHLSFDVDGLDPVF 235
Query: 276 APGVSHIEPGGLSFRDVLNILHNLQAD--VVAADVVEFNP 313
P GGLS+R+ L I + + D++E NP
Sbjct: 236 TPATGTPVVGGLSYREGLYITEEIYKTGLLSGLDIMEVNP 275
>pdb|3RLA|A Chain A, Altering The Binuclear Manganese Cluster Of Arginase
Diminishes Thermostability And Catalytic Function
pdb|3RLA|B Chain B, Altering The Binuclear Manganese Cluster Of Arginase
Diminishes Thermostability And Catalytic Function
pdb|3RLA|C Chain C, Altering The Binuclear Manganese Cluster Of Arginase
Diminishes Thermostability And Catalytic Function
pdb|4RLA|A Chain A, Altering The Binuclear Manganese Cluster Of Arginase
Diminishes Thermostability And Catalytic Function
pdb|4RLA|B Chain B, Altering The Binuclear Manganese Cluster Of Arginase
Diminishes Thermostability And Catalytic Function
pdb|4RLA|C Chain C, Altering The Binuclear Manganese Cluster Of Arginase
Diminishes Thermostability And Catalytic Function
pdb|5RLA|A Chain A, Altering The Binuclear Manganese Cluster Of Arginase
Diminishes Thermostability And Catalytic Function
pdb|5RLA|B Chain B, Altering The Binuclear Manganese Cluster Of Arginase
Diminishes Thermostability And Catalytic Function
pdb|5RLA|C Chain C, Altering The Binuclear Manganese Cluster Of Arginase
Diminishes Thermostability And Catalytic Function
Length = 323
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 94/220 (42%), Gaps = 31/220 (14%)
Query: 119 VQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDV 178
V+ R G +++L V+ E+ +++ +VLGGD+S++ I ++ + V
Sbjct: 67 VKNPRSVGKANEQLAAVVAET-----QKNGTISVVLGGDNSMAIGSISG-HARVHPDLCV 120
Query: 179 LHLDAHPDIYDAF---EGN---------------KYSHASSFARIMEGGYARRLLQVGIR 220
+ +DAH DI GN K+ F+ + A+ ++ +G+R
Sbjct: 121 IWVDAHTDINTPLTTSSGNLHGQPVAFLLKELKGKFPDVPGFSWVTPCISAKDIVYIGLR 180
Query: 221 SITKEGREQGKRFGVEQYEMRTFSR---DRQFLENLK--LGEGVKGVYISVDVDCLDPAF 275
+ K G++ + M + + E LG + +++S DVD LDP F
Sbjct: 181 DVDPGEHYIIKTLGIKYFSMTEVDKLGIGKVMEETFSYLLGRKKRPIHLSFDVDGLDPVF 240
Query: 276 APGVSHIEPGGLSFRDVLNILHNLQAD--VVAADVVEFNP 313
P GGLS+R+ L I + + D++E NP
Sbjct: 241 TPATGTPVVGGLSYREGLYITEEIYKTGLLSGLDIMEVNP 280
>pdb|1P8P|A Chain A, Structural And Functional Importance Of First-shell Metal
Ligands In The Binuclear Manganese Cluster Of Arginase
I.
pdb|1P8P|B Chain B, Structural And Functional Importance Of First-shell Metal
Ligands In The Binuclear Manganese Cluster Of Arginase
I.
pdb|1P8P|C Chain C, Structural And Functional Importance Of First-shell Metal
Ligands In The Binuclear Manganese Cluster Of Arginase I
Length = 314
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 94/220 (42%), Gaps = 31/220 (14%)
Query: 119 VQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDV 178
V+ R G +++L V+ E+ +++ +VLGGD+S++ I ++ + V
Sbjct: 62 VKNPRSVGKANEQLAAVVAET-----QKNGTISVVLGGDNSMAIGSISG-HARVHPDLCV 115
Query: 179 LHLDAHPDIYDAF---EGN---------------KYSHASSFARIMEGGYARRLLQVGIR 220
+ +DAH DI GN K+ F+ + A+ ++ +G+R
Sbjct: 116 IWVDAHTDINTPLTTSSGNLHGQPVAFLLKELKGKFPDVPGFSWVTPCISAKDIVYIGLR 175
Query: 221 SITKEGREQGKRFGVEQYEMRTFSR---DRQFLENLK--LGEGVKGVYISVDVDCLDPAF 275
+ K G++ + M + + E LG + +++S DVD LDP F
Sbjct: 176 DVDPGEHYIIKTLGIKYFSMTEVDKLGIGKVMEETFSYLLGRKKRPIHLSFDVDGLDPVF 235
Query: 276 APGVSHIEPGGLSFRDVLNILHNLQAD--VVAADVVEFNP 313
P GGLS+R+ L I + + D++E NP
Sbjct: 236 TPATGTPVVGGLSYREGLYITEEIYKTGLLSGLDIMEVNP 275
>pdb|1P8N|A Chain A, Structural And Functional Importance Of First-shell Metal
Ligands In The Binuclear Manganese Cluster Of Arginase
I.
pdb|1P8N|B Chain B, Structural And Functional Importance Of First-shell Metal
Ligands In The Binuclear Manganese Cluster Of Arginase
I.
pdb|1P8N|C Chain C, Structural And Functional Importance Of First-shell Metal
Ligands In The Binuclear Manganese Cluster Of Arginase I
Length = 314
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 93/220 (42%), Gaps = 31/220 (14%)
Query: 119 VQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDV 178
V+ R G +++L V+ E+ +++ +VLGGDHS++ I ++ + V
Sbjct: 62 VKNPRSVGKANEQLAAVVAET-----QKNGTISVVLGGDHSMAIGSISG-HARVHPDLCV 115
Query: 179 LHLDAHPDIYDAF---EGN---------------KYSHASSFARIMEGGYARRLLQVGIR 220
+ +DAH DI GN K+ F+ + A+ ++ +G+R
Sbjct: 116 IWVDAHTDINTPLTTSSGNLHGQPVAFLLKELKGKFPDVPGFSWVTPCISAKDIVYIGLR 175
Query: 221 SITKEGREQGKRFGVEQYEMRTFSR---DRQFLENLK--LGEGVKGVYISVDVDCLDPAF 275
+ K G++ + M + + E LG + +++S VD LDP F
Sbjct: 176 DVDPGEHYIIKTLGIKYFSMTEVDKLGIGKVMEETFSYLLGRKKRPIHLSFAVDGLDPVF 235
Query: 276 APGVSHIEPGGLSFRDVLNILHNLQAD--VVAADVVEFNP 313
P GGLS+R+ L I + + D++E NP
Sbjct: 236 TPATGTPVVGGLSYREGLYITEEIYKTGLLSGLDIMEVNP 275
>pdb|1P8R|A Chain A, Structural And Functional Importance Of First-Shell Metal
Ligands In The Binuclear Manganese Cluster Of Arginase
I.
pdb|1P8R|B Chain B, Structural And Functional Importance Of First-Shell Metal
Ligands In The Binuclear Manganese Cluster Of Arginase I
Length = 308
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 93/220 (42%), Gaps = 31/220 (14%)
Query: 119 VQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDV 178
V+ R G +++L V+ E+ +++ +VLGGD S++ I ++ + V
Sbjct: 62 VKNPRSVGKANEQLAAVVAET-----QKNGTISVVLGGDESMAIGSISG-HARVHPDLCV 115
Query: 179 LHLDAHPDIYDAF---EGN---------------KYSHASSFARIMEGGYARRLLQVGIR 220
+ +DAH DI GN K+ F+ + A+ ++ +G+R
Sbjct: 116 IWVDAHTDINTPLTTSSGNLHGQPVAFLLKELKGKFPDVPGFSWVTPCISAKDIVYIGLR 175
Query: 221 SITKEGREQGKRFGVEQYEMRTFSR---DRQFLENLK--LGEGVKGVYISVDVDCLDPAF 275
+ K G++ + M + + E LG + +++S DVD LDP F
Sbjct: 176 DVDPGEHYIIKTLGIKYFSMTEVDKLGIGKVMEETFSYLLGRKKRPIHLSFDVDGLDPVF 235
Query: 276 APGVSHIEPGGLSFRDVLNILHNLQAD--VVAADVVEFNP 313
P GGLS+R+ L I + + D++E NP
Sbjct: 236 TPATGTPVVGGLSYREGLYITEEIYKTGLLSGLDIMEVNP 275
>pdb|1P8S|A Chain A, Structural And Functional Importance Of First-Shell Metal
Ligands In The Binuclear Manganese Cluster Of Arginase
I.
pdb|1P8S|B Chain B, Structural And Functional Importance Of First-Shell Metal
Ligands In The Binuclear Manganese Cluster Of Arginase
I.
pdb|1P8S|C Chain C, Structural And Functional Importance Of First-Shell Metal
Ligands In The Binuclear Manganese Cluster Of Arginase I
Length = 314
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 93/220 (42%), Gaps = 31/220 (14%)
Query: 119 VQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDV 178
V+ R G +++L V+ E+ +++ +VLGGDHS++ I ++ + V
Sbjct: 62 VKNPRSVGKANEQLAAVVAET-----QKNGTISVVLGGDHSMAIGSISG-HARVHPDLCV 115
Query: 179 LHLDAHPDIYDAF---EGN---------------KYSHASSFARIMEGGYARRLLQVGIR 220
+ +DAH DI GN K+ F+ + A+ ++ +G+R
Sbjct: 116 IWVDAHTDINTPLTTSSGNLHGQPVAFLLKELKGKFPDVPGFSWVTPCISAKDIVYIGLR 175
Query: 221 SITKEGREQGKRFGVEQYEMRTFSR---DRQFLENLK--LGEGVKGVYISVDVDCLDPAF 275
+ K G++ + M + + E LG + +++S VD LDP F
Sbjct: 176 DVDPGEHYIIKTLGIKYFSMTEVDKLGIGKVMEETFSYLLGRKKRPIHLSFCVDGLDPVF 235
Query: 276 APGVSHIEPGGLSFRDVLNILHNLQAD--VVAADVVEFNP 313
P GGLS+R+ L I + + D++E NP
Sbjct: 236 TPATGTPVVGGLSYREGLYITEEIYKTGLLSGLDIMEVNP 275
>pdb|4G3H|A Chain A, Crystal Structure Of Helicobacter Pylori Arginase
pdb|4G3H|B Chain B, Crystal Structure Of Helicobacter Pylori Arginase
pdb|4G3H|C Chain C, Crystal Structure Of Helicobacter Pylori Arginase
pdb|4G3H|D Chain D, Crystal Structure Of Helicobacter Pylori Arginase
Length = 330
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 93/206 (45%), Gaps = 48/206 (23%)
Query: 151 PLVLGGDHSISFPVIRAV-SEKLGGPVDVLHLDAHPDIYDAFEGN-KYSHA--------- 199
PL+L +H+ F + +A S + +L+LDAH DI+ A++ + K+ H
Sbjct: 84 PLILSSEHANMFGIFQAFRSVHKDKKIGILYLDAHADIHTAYDSDSKHIHGMPLGMVLNR 143
Query: 200 --SSFARIME----------------GGYA---RRLLQVGIRSITKEGREQGKRFGVEQY 238
S F R+ E GG + L+ G+RS EQ +R + +
Sbjct: 144 VRSGFNRMSESEEKAWQKLCSLGLEKGGLEIDPKCLVYFGVRST-----EQSERDVIREL 198
Query: 239 EMRTFSRD--RQFLENL--KLGEGVKGV---YISVDVDCLDPAFAPGVSHIEPGGLSFRD 291
++ FS D R+ ++ + K E +K V Y+S+D+D +D E GLSF +
Sbjct: 199 QIPLFSVDAIRENMQEVVQKTKESLKAVDIIYLSLDLDIMDGKLFTSTGVRENNGLSFDE 258
Query: 292 ----VLNILHNLQADVVAADVVEFNP 313
+ +L + + + A +V E+NP
Sbjct: 259 LKQLLGLLLESFKDRLKAVEVTEYNP 284
>pdb|2A0M|A Chain A, Arginase Superfamily Protein From Trypanosoma Cruzi
Length = 316
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 11/172 (6%)
Query: 151 PLVLGGDHSISFPVIRAVSEKLGGPVDVLHLDAHPDIYDAFEGNKYSHASSFARIMEGG- 209
P V+GG + S P RA+ G V V+++D+H D+ + + + F +++E
Sbjct: 115 PFVIGGGNDQSAPNGRAMLRAFPGDVGVINVDSHLDVRPPLQDGRVHSGTPFRQLLEESS 174
Query: 210 -YARRLLQVGIRSITKEGREQGKRFGVEQYEMRTFSRDRQ-----FLENLKLGEGVKGVY 263
+R ++ + ++ G + Q + S R+ LE+ G K +
Sbjct: 175 FSGKRFVEFACQG-SQCGALHAQYVRDHQGHLMWLSEVRKKGAVAALED-AFGLTGKNTF 232
Query: 264 ISVDVDCLDPAFAPGVSHIEPGGLSFRDVLNI--LHNLQADVVAADVVEFNP 313
S DVD L + PGVS GLS ++ ++ L V+ D+ E NP
Sbjct: 233 FSFDVDSLKSSDMPGVSCPAAVGLSAQEAFDMCFLAGKTPTVMMMDMSELNP 284
>pdb|1R9J|A Chain A, Transketolase From Leishmania Mexicana
pdb|1R9J|B Chain B, Transketolase From Leishmania Mexicana
Length = 673
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 6/66 (9%)
Query: 186 DIYDAFEGNKYSHA----SSFARIMEGGYARRLLQVGIRSITKEGREQGKRF--GVEQYE 239
+ Y +F KYSHA S F G + + + + + GRE KRF G +
Sbjct: 607 EAYVSFGWEKYSHAHVGMSGFGASAPAGVLYKKFGITVEEVVRTGRELAKRFPDGTAPLK 666
Query: 240 MRTFSR 245
+FS+
Sbjct: 667 NSSFSK 672
>pdb|2A3L|A Chain A, X-Ray Structure Of Adenosine 5'-Monophosphate Deaminase
From Arabidopsis Thaliana In Complex With Coformycin
5'-Phosphate
Length = 701
Score = 28.1 bits (61), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Query: 251 ENLKLGEGVKGVYISVDVDCLDPAFA--PGVSHIEPGGLSFRDVLNILHNLQADVVAADV 308
+NL EG+ Y+ + D PA A +S + V LH +Q D +AAD+
Sbjct: 23 DNLTNSEGLDASYLQANGDNEMPADANEEQISMAASSMIRSHSVSGDLHGVQPDPIAADI 82
Query: 309 VEFNPQRDT 317
+ P+++T
Sbjct: 83 LRKEPEQET 91
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.137 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,920,582
Number of Sequences: 62578
Number of extensions: 426265
Number of successful extensions: 946
Number of sequences better than 100.0: 52
Number of HSP's better than 100.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 855
Number of HSP's gapped (non-prelim): 53
length of query: 339
length of database: 14,973,337
effective HSP length: 99
effective length of query: 240
effective length of database: 8,778,115
effective search space: 2106747600
effective search space used: 2106747600
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)