Query 019567
Match_columns 339
No_of_seqs 338 out of 1325
Neff 10.8
Searched_HMMs 46136
Date Fri Mar 29 02:47:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019567.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019567hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2532 Permease of the major 100.0 4.7E-40 1E-44 292.4 31.0 330 9-338 65-399 (466)
2 COG2271 UhpC Sugar phosphate p 100.0 7.7E-39 1.7E-43 269.9 21.9 326 2-336 49-386 (448)
3 COG2814 AraJ Arabinose efflux 100.0 2.1E-37 4.6E-42 264.6 29.1 305 3-337 34-340 (394)
4 TIGR00903 2A0129 major facilit 100.0 1.7E-36 3.6E-41 266.0 30.8 311 1-338 10-322 (368)
5 TIGR00894 2A0114euk Na(+)-depe 100.0 2.4E-36 5.1E-41 274.9 31.9 328 11-338 70-402 (465)
6 TIGR02332 HpaX 4-hydroxyphenyl 100.0 3.5E-36 7.7E-41 269.0 28.8 262 2-266 28-309 (412)
7 PRK03545 putative arabinose tr 100.0 1.3E-35 2.8E-40 264.1 30.1 242 3-266 30-271 (390)
8 TIGR00893 2A0114 d-galactonate 100.0 3.4E-35 7.4E-40 261.6 31.1 264 2-267 14-282 (399)
9 PRK09556 uhpT sugar phosphate 100.0 4.1E-36 8.8E-41 273.1 25.0 265 2-266 49-324 (467)
10 PRK14995 methyl viologen resis 100.0 3.4E-35 7.4E-40 268.6 29.9 326 2-338 26-393 (495)
11 PRK11663 regulatory protein Uh 100.0 1.8E-34 3.9E-39 259.9 29.0 263 2-266 43-309 (434)
12 PRK09705 cynX putative cyanate 100.0 3E-34 6.4E-39 255.2 28.8 242 1-266 28-270 (393)
13 TIGR00886 2A0108 nitrite extru 100.0 5.2E-34 1.1E-38 251.8 27.7 322 2-337 21-358 (366)
14 TIGR00711 efflux_EmrB drug res 100.0 4.3E-34 9.3E-39 261.7 26.8 326 2-338 22-390 (485)
15 PRK10213 nepI ribonucleoside t 100.0 3.4E-33 7.3E-38 248.3 31.2 302 3-335 41-343 (394)
16 TIGR00890 2A0111 Oxalate/Forma 100.0 1.3E-33 2.9E-38 249.9 28.5 310 2-337 23-336 (377)
17 PF07690 MFS_1: Major Facilita 100.0 1.5E-34 3.3E-39 253.7 22.1 320 3-338 17-341 (352)
18 PLN00028 nitrate transmembrane 100.0 2.3E-33 5E-38 255.0 30.2 323 2-337 56-388 (476)
19 TIGR00710 efflux_Bcr_CflA drug 100.0 3.7E-33 8E-38 248.0 30.7 248 2-266 25-272 (385)
20 TIGR00881 2A0104 phosphoglycer 100.0 4.6E-34 9.9E-39 253.0 23.7 263 2-266 15-282 (379)
21 TIGR00900 2A0121 H+ Antiporter 100.0 3.8E-33 8.2E-38 246.0 28.1 315 3-338 20-343 (365)
22 PRK11551 putative 3-hydroxyphe 100.0 5.1E-33 1.1E-37 248.9 28.1 311 2-338 35-350 (406)
23 PRK10406 alpha-ketoglutarate t 100.0 6.4E-33 1.4E-37 249.8 28.5 245 2-266 42-309 (432)
24 PRK10091 MFS transport protein 100.0 1.5E-32 3.2E-37 243.7 28.4 260 2-292 23-282 (382)
25 PRK11102 bicyclomycin/multidru 100.0 4.3E-32 9.4E-37 240.6 31.2 250 2-266 11-260 (377)
26 COG2223 NarK Nitrate/nitrite t 100.0 4.8E-33 1E-37 235.4 22.7 308 2-336 34-353 (417)
27 PRK15402 multidrug efflux syst 100.0 9.2E-32 2E-36 240.7 32.3 311 2-337 33-349 (406)
28 PRK15403 multidrug efflux syst 100.0 8.2E-32 1.8E-36 240.8 31.4 245 2-262 36-280 (413)
29 PRK03699 putative transporter; 100.0 6.2E-32 1.3E-36 240.7 29.6 244 2-266 27-271 (394)
30 TIGR00891 2A0112 putative sial 100.0 2.8E-32 6.1E-37 243.9 27.5 324 2-337 32-369 (405)
31 PRK10642 proline/glycine betai 100.0 4.3E-32 9.4E-37 248.0 28.0 257 2-266 36-316 (490)
32 PRK10473 multidrug efflux syst 100.0 2.7E-31 5.8E-36 236.7 30.5 268 3-297 24-291 (392)
33 PRK11273 glpT sn-glycerol-3-ph 100.0 2.5E-31 5.5E-36 240.7 30.0 263 3-266 50-319 (452)
34 PRK10504 putative transporter; 100.0 4.6E-31 1E-35 240.7 30.8 325 2-337 30-394 (471)
35 PRK10133 L-fucose transporter; 100.0 4.2E-31 9.2E-36 237.4 29.7 310 2-335 46-385 (438)
36 TIGR00899 2A0120 sugar efflux 100.0 3.8E-31 8.2E-36 234.3 28.8 306 3-337 18-328 (375)
37 PRK12307 putative sialic acid 100.0 2E-31 4.4E-36 240.1 26.8 256 2-266 38-296 (426)
38 TIGR00896 CynX cyanate transpo 100.0 7.6E-31 1.6E-35 230.7 29.7 264 1-296 19-284 (355)
39 PRK11043 putative transporter; 100.0 9.9E-31 2.2E-35 233.7 29.6 309 2-338 26-337 (401)
40 PRK11652 emrD multidrug resist 100.0 3.3E-30 7.2E-35 229.8 32.6 309 2-337 28-339 (394)
41 TIGR00897 2A0118 polyol permea 100.0 1.5E-30 3.4E-35 232.3 29.9 250 4-266 35-287 (402)
42 TIGR00892 2A0113 monocarboxyla 100.0 4.1E-31 8.9E-36 239.1 26.2 327 2-337 39-374 (455)
43 PRK15034 nitrate/nitrite trans 100.0 1.1E-30 2.4E-35 231.1 27.7 293 2-327 54-375 (462)
44 TIGR00895 2A0115 benzoate tran 100.0 5.3E-31 1.1E-35 235.0 24.9 324 2-337 37-379 (398)
45 TIGR01299 synapt_SV2 synaptic 100.0 1.1E-30 2.5E-35 243.9 27.7 324 2-337 187-689 (742)
46 KOG1330 Sugar transporter/spin 100.0 5.5E-33 1.2E-37 236.8 10.8 326 4-337 55-390 (493)
47 TIGR00712 glpT glycerol-3-phos 100.0 1.1E-30 2.4E-35 235.7 26.0 262 4-266 49-317 (438)
48 TIGR00885 fucP L-fucose:H+ sym 100.0 7.6E-30 1.6E-34 227.4 30.2 296 2-324 23-347 (410)
49 PRK11195 lysophospholipid tran 100.0 1.8E-30 4E-35 230.7 25.5 309 4-338 25-336 (393)
50 KOG2533 Permease of the major 100.0 9.3E-31 2E-35 233.5 22.6 255 8-264 72-337 (495)
51 PRK09952 shikimate transporter 100.0 9.8E-30 2.1E-34 229.2 29.4 244 8-266 49-316 (438)
52 PRK15075 citrate-proton sympor 100.0 7.1E-30 1.5E-34 230.2 27.6 247 2-266 35-304 (434)
53 PRK10077 xylE D-xylose transpo 100.0 8.8E-30 1.9E-34 232.9 28.3 325 2-337 32-405 (479)
54 PRK11646 multidrug resistance 100.0 2.5E-29 5.4E-34 224.0 29.8 302 6-338 35-339 (400)
55 TIGR00901 2A0125 AmpG-related 100.0 3.1E-29 6.8E-34 220.5 30.0 312 2-338 8-351 (356)
56 TIGR00898 2A0119 cation transp 100.0 4.7E-30 1E-34 236.1 25.6 315 3-336 110-450 (505)
57 PRK03633 putative MFS family t 100.0 5.3E-29 1.2E-33 220.9 28.0 240 2-266 26-265 (381)
58 TIGR00805 oat sodium-independe 100.0 1.3E-30 2.9E-35 242.6 18.3 265 2-266 53-397 (633)
59 cd06174 MFS The Major Facilita 100.0 1.7E-28 3.6E-33 215.1 28.9 285 2-337 19-306 (352)
60 PRK05122 major facilitator sup 100.0 1E-28 2.2E-33 220.6 27.2 299 3-337 36-343 (399)
61 PRK09874 drug efflux system pr 100.0 2.1E-28 4.5E-33 219.3 29.0 308 2-337 34-352 (408)
62 PRK12382 putative transporter; 100.0 1.7E-28 3.7E-33 218.6 27.8 299 3-337 36-343 (392)
63 TIGR00879 SP MFS transporter, 100.0 5.6E-29 1.2E-33 227.2 24.8 263 2-266 48-349 (481)
64 PRK15011 sugar efflux transpor 100.0 5.3E-28 1.1E-32 215.3 29.9 299 7-337 41-345 (393)
65 TIGR00902 2A0127 phenyl propri 100.0 3.6E-28 7.7E-33 215.6 28.6 303 3-336 25-332 (382)
66 PRK10489 enterobactin exporter 100.0 1.1E-28 2.4E-33 221.6 25.4 311 3-337 38-353 (417)
67 PRK11128 putative 3-phenylprop 100.0 2.9E-28 6.3E-33 216.2 27.7 304 2-336 24-332 (382)
68 PRK03893 putative sialic acid 100.0 9.7E-29 2.1E-33 227.0 25.3 260 2-266 40-341 (496)
69 TIGR00887 2A0109 phosphate:H+ 100.0 3.4E-28 7.4E-33 223.1 28.0 260 3-266 37-365 (502)
70 TIGR00883 2A0106 metabolite-pr 100.0 6.8E-28 1.5E-32 214.6 26.8 247 3-266 14-285 (394)
71 PRK10054 putative transporter; 100.0 4.4E-28 9.5E-33 215.7 24.2 302 6-336 32-338 (395)
72 COG0738 FucP Fucose permease [ 100.0 2.4E-26 5.1E-31 193.6 28.7 305 2-332 33-359 (422)
73 TIGR00806 rfc RFC reduced fola 100.0 1.1E-26 2.4E-31 202.1 26.2 325 2-337 46-394 (511)
74 COG2807 CynX Cyanate permease 100.0 2.1E-26 4.7E-31 191.0 26.2 306 1-338 31-339 (395)
75 PRK11010 ampG muropeptide tran 100.0 3.4E-26 7.3E-31 208.6 29.5 248 3-266 33-289 (491)
76 KOG2504 Monocarboxylate transp 100.0 1.9E-26 4.1E-31 208.0 25.4 324 2-336 66-428 (509)
77 PRK08633 2-acyl-glycerophospho 100.0 1.1E-26 2.4E-31 233.3 25.9 316 5-337 33-363 (1146)
78 KOG3764 Vesicular amine transp 100.0 2.7E-27 5.9E-32 198.0 16.6 264 10-300 99-363 (464)
79 PRK11902 ampG muropeptide tran 100.0 5.1E-25 1.1E-29 196.8 31.8 248 3-266 20-276 (402)
80 PRK06814 acylglycerophosphoeth 100.0 1.7E-26 3.6E-31 231.4 23.3 237 17-266 52-291 (1140)
81 TIGR00882 2A0105 oligosacchari 99.9 1.9E-25 4.1E-30 199.3 25.5 277 4-301 24-310 (396)
82 KOG0569 Permease of the major 99.9 5.8E-25 1.3E-29 194.0 27.2 275 8-293 45-353 (485)
83 PRK09528 lacY galactoside perm 99.9 1.5E-25 3.2E-30 201.5 21.5 274 7-301 36-318 (420)
84 PRK10207 dipeptide/tripeptide 99.9 3E-24 6.4E-29 195.0 27.5 327 4-337 37-420 (489)
85 TIGR00924 yjdL_sub1_fam amino 99.9 4.6E-24 9.9E-29 193.7 27.6 329 5-337 33-422 (475)
86 TIGR00792 gph sugar (Glycoside 99.9 9.4E-25 2E-29 197.4 23.0 309 4-337 22-359 (437)
87 KOG2615 Permease of the major 99.9 4.7E-25 1E-29 183.6 19.0 310 16-337 67-393 (451)
88 TIGR00889 2A0110 nucleoside tr 99.9 1.2E-23 2.7E-28 188.3 25.6 304 2-337 23-349 (418)
89 PF05977 MFS_3: Transmembrane 99.9 3.2E-23 7E-28 188.0 27.4 311 5-337 33-348 (524)
90 PF06609 TRI12: Fungal trichot 99.9 2.9E-23 6.3E-28 187.8 26.7 321 3-335 65-444 (599)
91 TIGR02718 sider_RhtX_FptX side 99.9 9.9E-23 2.1E-27 181.4 28.5 246 3-266 22-274 (390)
92 KOG0254 Predicted transporter 99.9 1.7E-23 3.6E-28 192.3 23.5 262 18-293 90-377 (513)
93 PTZ00207 hypothetical protein; 99.9 2.6E-22 5.7E-27 182.7 26.4 329 2-334 47-489 (591)
94 KOG0255 Synaptic vesicle trans 99.9 6.1E-22 1.3E-26 182.8 26.5 299 10-327 111-436 (521)
95 PRK09584 tppB putative tripept 99.9 7.6E-21 1.6E-25 173.7 26.3 144 5-150 45-192 (500)
96 KOG0253 Synaptic vesicle trans 99.9 3E-21 6.5E-26 160.3 20.7 311 4-328 100-465 (528)
97 TIGR01301 GPH_sucrose GPH fami 99.9 2.5E-19 5.3E-24 160.2 26.8 274 4-293 26-354 (477)
98 PRK15462 dipeptide/tripeptide 99.9 9.2E-19 2E-23 157.2 29.0 144 7-152 35-182 (493)
99 TIGR01272 gluP glucose/galacto 99.9 2.6E-19 5.6E-24 153.6 23.0 243 68-335 6-268 (310)
100 PF00083 Sugar_tr: Sugar (and 99.9 1.6E-25 3.5E-30 203.2 -17.2 260 18-292 47-333 (451)
101 PRK09669 putative symporter Ya 99.8 5.5E-19 1.2E-23 160.0 24.8 243 5-266 33-294 (444)
102 PF13347 MFS_2: MFS/sugar tran 99.8 4.8E-20 1E-24 166.1 17.8 295 4-324 24-341 (428)
103 PRK10429 melibiose:sodium symp 99.8 8.7E-19 1.9E-23 159.7 23.9 248 5-266 30-296 (473)
104 PRK09848 glucuronide transport 99.8 3.1E-18 6.7E-23 155.3 24.3 264 5-295 32-314 (448)
105 PF03825 Nuc_H_symport: Nucleo 99.8 1.6E-17 3.4E-22 146.8 26.3 307 3-336 23-341 (400)
106 TIGR00788 fbt folate/biopterin 99.8 4.5E-19 9.7E-24 160.7 16.9 320 3-337 47-392 (468)
107 KOG0252 Inorganic phosphate tr 99.8 8.4E-20 1.8E-24 156.1 10.4 312 14-336 81-446 (538)
108 PF03137 OATP: Organic Anion T 99.8 7.2E-21 1.6E-25 173.3 -0.4 265 2-266 23-372 (539)
109 PF01306 LacY_symp: LacY proto 99.8 2.9E-17 6.3E-22 142.7 21.7 282 5-307 30-321 (412)
110 KOG3626 Organic anion transpor 99.8 2E-18 4.4E-23 157.6 13.9 265 2-266 117-459 (735)
111 KOG4686 Predicted sugar transp 99.8 1.4E-18 2.9E-23 139.8 9.6 310 5-335 67-391 (459)
112 PF11700 ATG22: Vacuole efflux 99.8 9.4E-16 2E-20 138.1 28.5 305 18-336 71-420 (477)
113 PF03209 PUCC: PUCC protein; 99.8 5.4E-16 1.2E-20 132.6 23.4 308 7-335 5-340 (403)
114 KOG2563 Permease of the major 99.8 2.1E-16 4.5E-21 135.5 20.4 253 2-266 65-331 (480)
115 PRK11462 putative transporter; 99.7 1.9E-15 4.2E-20 137.0 27.5 242 5-266 33-293 (460)
116 COG2211 MelB Na+/melibiose sym 99.7 1.7E-15 3.8E-20 133.0 24.5 295 7-324 38-353 (467)
117 COG3104 PTR2 Dipeptide/tripept 99.7 1.1E-15 2.3E-20 133.3 22.8 153 4-158 44-205 (498)
118 TIGR00880 2_A_01_02 Multidrug 99.7 5.6E-17 1.2E-21 122.6 12.3 137 23-161 4-140 (141)
119 PF05631 DUF791: Protein of un 99.7 2.5E-14 5.4E-19 120.6 25.4 240 3-261 55-303 (354)
120 TIGR00889 2A0110 nucleoside tr 99.7 2E-15 4.3E-20 135.4 18.3 161 6-167 232-410 (418)
121 KOG2816 Predicted transporter 99.7 4.6E-15 1E-19 132.2 18.1 293 27-336 72-370 (463)
122 PRK05122 major facilitator sup 99.6 1.8E-14 4E-19 128.8 18.5 155 6-164 240-394 (399)
123 COG2270 Permeases of the major 99.6 6.5E-14 1.4E-18 119.8 19.8 302 17-336 58-381 (438)
124 PRK10642 proline/glycine betai 99.6 6.4E-14 1.4E-18 128.5 20.0 161 5-166 273-436 (490)
125 PRK09528 lacY galactoside perm 99.6 8.3E-15 1.8E-19 131.8 12.9 150 13-164 258-408 (420)
126 PRK10489 enterobactin exporter 99.6 5E-14 1.1E-18 126.7 16.3 159 4-164 245-404 (417)
127 TIGR00890 2A0111 Oxalate/Forma 99.6 3.6E-14 7.8E-19 125.5 14.4 145 5-151 228-374 (377)
128 PRK15011 sugar efflux transpor 99.6 1.1E-13 2.5E-18 123.3 17.4 148 7-157 242-389 (393)
129 TIGR01299 synapt_SV2 synaptic 99.6 1E-13 2.2E-18 130.7 16.9 141 20-164 598-738 (742)
130 cd06174 MFS The Major Facilita 99.6 1.1E-13 2.4E-18 121.1 16.1 150 5-156 198-349 (352)
131 PRK11551 putative 3-hydroxyphe 99.6 1.7E-13 3.7E-18 122.8 17.2 151 5-157 243-394 (406)
132 PRK12382 putative transporter; 99.6 1.7E-13 3.7E-18 122.2 17.1 149 6-158 240-388 (392)
133 PRK03893 putative sialic acid 99.6 6.8E-14 1.5E-18 128.7 14.5 146 5-150 298-444 (496)
134 PRK09874 drug efflux system pr 99.6 9.8E-14 2.1E-18 124.4 15.1 142 19-162 260-401 (408)
135 PRK09556 uhpT sugar phosphate 99.5 1.9E-13 4E-18 124.7 15.9 152 5-156 281-446 (467)
136 PRK03633 putative MFS family t 99.5 5.2E-13 1.1E-17 118.7 18.2 147 5-156 223-369 (381)
137 TIGR00892 2A0113 monocarboxyla 99.5 4.9E-14 1.1E-18 127.9 11.4 147 5-153 264-415 (455)
138 TIGR00899 2A0120 sugar efflux 99.5 4.9E-13 1.1E-17 118.4 17.0 147 7-156 225-371 (375)
139 PRK03545 putative arabinose tr 99.5 9.3E-13 2E-17 117.4 18.3 152 6-160 230-381 (390)
140 PF01770 Folate_carrier: Reduc 99.5 5.6E-11 1.2E-15 103.2 28.2 322 5-337 27-381 (412)
141 TIGR00902 2A0127 phenyl propri 99.5 9.1E-13 2E-17 117.1 17.1 146 5-154 228-374 (382)
142 TIGR00879 SP MFS transporter, 99.5 5E-13 1.1E-17 122.1 15.9 159 5-163 307-474 (481)
143 PRK10077 xylE D-xylose transpo 99.5 1.2E-12 2.7E-17 119.9 18.3 160 5-164 294-462 (479)
144 KOG2325 Predicted transporter/ 99.5 3.2E-12 7E-17 112.9 19.9 228 6-242 59-304 (488)
145 PRK09705 cynX putative cyanate 99.5 2.9E-12 6.4E-17 114.2 18.0 158 5-165 228-387 (393)
146 PRK11010 ampG muropeptide tran 99.5 3.5E-11 7.6E-16 110.2 24.2 153 6-158 247-402 (491)
147 PRK03699 putative transporter; 99.5 1.9E-12 4.1E-17 115.6 15.3 150 5-157 228-378 (394)
148 TIGR00897 2A0118 polyol permea 99.4 1.2E-11 2.6E-16 110.7 17.8 151 5-157 245-399 (402)
149 PRK11663 regulatory protein Uh 99.4 8E-12 1.7E-16 113.0 16.5 155 8-162 270-427 (434)
150 TIGR00883 2A0106 metabolite-pr 99.4 3.2E-12 6.9E-17 113.8 13.3 145 5-149 242-391 (394)
151 PF05977 MFS_3: Transmembrane 99.4 1.3E-11 2.8E-16 112.7 17.0 150 4-155 240-390 (524)
152 TIGR00891 2A0112 putative sial 99.4 6E-12 1.3E-16 112.6 14.4 137 7-144 264-401 (405)
153 PRK12307 putative sialic acid 99.4 1.1E-11 2.3E-16 112.0 15.4 136 5-142 254-391 (426)
154 TIGR00893 2A0114 d-galactonate 99.4 1.5E-11 3.2E-16 109.4 15.5 147 7-156 241-396 (399)
155 PRK11273 glpT sn-glycerol-3-ph 99.4 1.9E-11 4.1E-16 111.1 15.8 154 5-158 276-434 (452)
156 PRK11128 putative 3-phenylprop 99.4 4.8E-11 1E-15 106.1 17.3 142 6-151 229-371 (382)
157 PRK09952 shikimate transporter 99.4 6E-11 1.3E-15 107.3 18.1 154 7-161 276-434 (438)
158 PF03092 BT1: BT1 family; Int 99.4 1.7E-11 3.7E-16 110.0 14.4 157 4-161 12-177 (433)
159 COG2814 AraJ Arabinose efflux 99.3 7E-11 1.5E-15 102.2 16.5 156 3-161 233-388 (394)
160 TIGR00900 2A0121 H+ Antiporter 99.3 2.6E-11 5.6E-16 106.8 14.4 131 4-136 233-365 (365)
161 PF11700 ATG22: Vacuole efflux 99.3 1.2E-10 2.5E-15 105.4 17.2 149 7-157 307-466 (477)
162 PRK15075 citrate-proton sympor 99.3 9.4E-11 2E-15 106.0 16.4 134 5-138 261-398 (434)
163 PRK15402 multidrug efflux syst 99.3 1.8E-10 3.9E-15 103.3 17.8 153 8-161 242-397 (406)
164 TIGR02718 sider_RhtX_FptX side 99.3 1.3E-10 2.9E-15 103.6 16.6 149 5-153 231-385 (390)
165 TIGR00926 2A1704 Peptide:H+ sy 99.3 8.1E-09 1.8E-13 96.7 28.9 155 4-158 10-181 (654)
166 PRK10504 putative transporter; 99.3 7.6E-11 1.7E-15 107.8 15.4 133 5-137 284-418 (471)
167 TIGR00882 2A0105 oligosacchari 99.3 1E-10 2.2E-15 104.5 15.4 142 13-156 250-392 (396)
168 PLN00028 nitrate transmembrane 99.3 4.8E-11 1E-15 109.0 13.0 147 8-158 279-432 (476)
169 TIGR00712 glpT glycerol-3-phos 99.3 9.3E-11 2E-15 106.2 14.2 159 5-163 274-437 (438)
170 TIGR00887 2A0109 phosphate:H+ 99.3 1.8E-10 3.9E-15 106.2 16.0 159 5-164 311-493 (502)
171 PRK10091 MFS transport protein 99.3 2.7E-10 5.9E-15 101.3 16.3 151 5-158 223-375 (382)
172 PRK10054 putative transporter; 99.2 1.1E-10 2.4E-15 104.2 13.1 151 11-163 238-388 (395)
173 PRK11902 ampG muropeptide tran 99.2 6.5E-10 1.4E-14 99.5 17.9 147 6-156 234-387 (402)
174 PRK11646 multidrug resistance 99.2 1.7E-10 3.7E-15 103.1 14.0 148 5-154 231-383 (400)
175 TIGR00792 gph sugar (Glycoside 99.2 1.5E-10 3.3E-15 104.8 13.5 122 15-137 255-383 (437)
176 PRK10213 nepI ribonucleoside t 99.2 8.2E-10 1.8E-14 98.5 17.9 146 5-154 240-386 (394)
177 TIGR00895 2A0115 benzoate tran 99.2 1.9E-10 4.1E-15 102.6 13.5 125 5-131 273-397 (398)
178 PRK10406 alpha-ketoglutarate t 99.2 6.5E-10 1.4E-14 100.5 17.1 151 5-156 266-421 (432)
179 COG2271 UhpC Sugar phosphate p 99.2 1.3E-10 2.8E-15 99.7 11.6 155 7-161 278-436 (448)
180 PF06813 Nodulin-like: Nodulin 99.2 8.1E-10 1.8E-14 90.5 15.3 160 2-164 22-186 (250)
181 PF01306 LacY_symp: LacY proto 99.2 6.4E-10 1.4E-14 97.3 14.7 148 16-165 258-406 (412)
182 COG2270 Permeases of the major 99.2 3.7E-10 8E-15 97.1 12.6 143 9-153 280-423 (438)
183 TIGR00898 2A0119 cation transp 99.2 9.9E-10 2.2E-14 101.4 16.1 139 21-164 359-499 (505)
184 PRK11195 lysophospholipid tran 99.2 1.3E-09 2.9E-14 97.2 16.1 144 7-154 231-375 (393)
185 PF03825 Nuc_H_symport: Nucleo 99.2 2.4E-09 5.3E-14 95.0 17.2 155 6-162 231-398 (400)
186 KOG0569 Permease of the major 99.2 3.4E-09 7.4E-14 94.6 17.6 160 7-167 295-462 (485)
187 PRK08633 2-acyl-glycerophospho 99.1 9.4E-10 2E-14 111.5 15.6 143 6-150 257-401 (1146)
188 TIGR02332 HpaX 4-hydroxyphenyl 99.1 6.9E-10 1.5E-14 99.6 12.4 142 5-148 265-410 (412)
189 TIGR00881 2A0104 phosphoglycer 99.1 5.8E-10 1.3E-14 98.7 11.8 134 8-141 243-379 (379)
190 TIGR00896 CynX cyanate transpo 99.1 1.1E-09 2.5E-14 96.3 13.5 129 5-136 220-350 (355)
191 PF06963 FPN1: Ferroportin1 (F 99.1 3.9E-08 8.4E-13 87.2 22.7 307 25-338 46-398 (432)
192 KOG2504 Monocarboxylate transp 99.1 7.6E-10 1.6E-14 100.7 11.9 153 4-158 320-475 (509)
193 TIGR01272 gluP glucose/galacto 99.1 2.6E-09 5.7E-14 91.9 14.7 130 11-145 172-301 (310)
194 TIGR00711 efflux_EmrB drug res 99.1 1.7E-09 3.7E-14 99.3 13.7 127 8-134 282-410 (485)
195 PRK09848 glucuronide transport 99.1 2.6E-09 5.6E-14 97.1 14.7 128 10-137 257-391 (448)
196 PRK10473 multidrug efflux syst 99.1 5.3E-09 1.2E-13 93.3 15.5 133 8-147 230-362 (392)
197 TIGR00769 AAA ADP/ATP carrier 99.1 4.7E-07 1E-11 81.4 27.4 256 6-266 27-333 (472)
198 PRK06814 acylglycerophosphoeth 99.1 2.2E-09 4.8E-14 108.6 14.3 144 8-151 252-414 (1140)
199 TIGR00710 efflux_Bcr_CflA drug 99.1 8E-09 1.7E-13 91.8 16.4 134 8-143 233-370 (385)
200 KOG4686 Predicted sugar transp 99.1 2.7E-09 5.8E-14 86.8 11.7 149 7-159 290-442 (459)
201 COG0477 ProP Permeases of the 99.1 8.1E-09 1.8E-13 88.4 15.5 145 4-150 24-176 (338)
202 PRK14995 methyl viologen resis 99.1 3.7E-09 7.9E-14 97.3 14.0 127 7-133 285-412 (495)
203 PRK10133 L-fucose transporter; 99.0 6.5E-09 1.4E-13 94.0 15.2 140 9-153 287-427 (438)
204 TIGR00788 fbt folate/biopterin 99.0 5.2E-09 1.1E-13 95.3 14.4 127 10-136 281-415 (468)
205 COG2223 NarK Nitrate/nitrite t 99.0 3.9E-09 8.5E-14 90.8 12.5 151 7-158 244-400 (417)
206 TIGR00901 2A0125 AmpG-related 99.0 3.5E-09 7.6E-14 93.2 11.7 114 5-118 232-355 (356)
207 PRK11043 putative transporter; 99.0 1.8E-08 4E-13 90.2 16.4 134 5-139 226-362 (401)
208 PRK10429 melibiose:sodium symp 99.0 9.8E-09 2.1E-13 93.9 13.7 123 15-137 264-396 (473)
209 TIGR00894 2A0114euk Na(+)-depe 99.0 1.4E-08 3E-13 92.8 14.0 149 8-157 288-448 (465)
210 TIGR00903 2A0129 major facilit 98.9 4.8E-08 1E-12 86.2 15.3 144 5-156 215-362 (368)
211 PRK11102 bicyclomycin/multidru 98.9 7.6E-08 1.6E-12 85.4 16.7 122 7-129 220-344 (377)
212 PRK09669 putative symporter Ya 98.9 2E-08 4.4E-13 91.1 13.2 120 18-137 265-391 (444)
213 PRK15034 nitrate/nitrite trans 98.9 8E-08 1.7E-12 86.2 16.6 137 23-159 292-454 (462)
214 COG2807 CynX Cyanate permease 98.9 7.9E-08 1.7E-12 81.3 15.3 152 5-159 231-385 (395)
215 PF07690 MFS_1: Major Facilita 98.9 1.2E-08 2.6E-13 89.4 11.2 121 5-125 229-352 (352)
216 KOG3762 Predicted transporter 98.9 6.7E-09 1.4E-13 91.7 9.3 147 10-158 399-546 (618)
217 TIGR00924 yjdL_sub1_fam amino 98.9 4.9E-08 1.1E-12 89.2 15.3 142 19-160 314-469 (475)
218 KOG4332 Predicted sugar transp 98.9 8.7E-08 1.9E-12 77.5 13.7 300 7-334 62-382 (454)
219 KOG0253 Synaptic vesicle trans 98.8 1.4E-08 3E-13 85.8 8.6 128 27-158 391-518 (528)
220 KOG3098 Uncharacterized conser 98.8 1.6E-06 3.4E-11 77.1 21.2 105 23-130 56-160 (461)
221 PF13347 MFS_2: MFS/sugar tran 98.8 1.7E-07 3.6E-12 84.7 14.9 131 6-137 249-387 (428)
222 PRK09584 tppB putative tripept 98.8 1.2E-07 2.6E-12 87.2 13.6 139 19-159 318-479 (500)
223 PRK11652 emrD multidrug resist 98.8 6.3E-07 1.4E-11 80.1 17.0 127 8-135 234-361 (394)
224 PF06779 DUF1228: Protein of u 98.7 4.2E-08 9.1E-13 65.3 6.3 73 1-75 11-83 (85)
225 COG2211 MelB Na+/melibiose sym 98.7 5.7E-07 1.2E-11 79.9 15.1 125 12-136 267-398 (467)
226 KOG3810 Micronutrient transpor 98.7 4.5E-07 9.8E-12 76.0 13.5 315 11-336 35-366 (433)
227 KOG0637 Sucrose transporter an 98.7 2.8E-07 6E-12 80.2 12.1 126 4-131 54-202 (498)
228 PRK10207 dipeptide/tripeptide 98.7 3.9E-07 8.5E-12 83.4 13.3 141 19-159 311-476 (489)
229 PF02487 CLN3: CLN3 protein; 98.7 1.1E-05 2.4E-10 70.6 21.3 136 20-163 62-199 (402)
230 TIGR00886 2A0108 nitrite extru 98.7 2E-07 4.3E-12 82.3 10.7 126 201-336 2-130 (366)
231 PRK11462 putative transporter; 98.7 9.6E-07 2.1E-11 80.5 15.1 122 16-137 262-390 (460)
232 PF05978 UNC-93: Ion channel r 98.6 1.7E-06 3.7E-11 65.6 13.3 109 20-131 40-148 (156)
233 TIGR00885 fucP L-fucose:H+ sym 98.6 1.6E-06 3.6E-11 77.7 14.9 128 13-145 265-398 (410)
234 KOG3764 Vesicular amine transp 98.6 2.3E-07 5E-12 79.3 8.7 149 8-158 297-453 (464)
235 PRK15403 multidrug efflux syst 98.6 2.9E-06 6.2E-11 76.3 16.1 157 5-163 241-401 (413)
236 PF03209 PUCC: PUCC protein; 98.5 1.7E-05 3.8E-10 68.8 16.7 147 9-155 236-394 (403)
237 KOG0254 Predicted transporter 98.4 1E-05 2.2E-10 75.0 15.7 158 6-165 319-489 (513)
238 PRK15462 dipeptide/tripeptide 98.4 3.2E-06 7E-11 76.8 11.5 87 199-294 8-95 (493)
239 PF03219 TLC: TLC ATP/ADP tran 98.4 0.00074 1.6E-08 61.4 25.5 246 16-266 57-349 (491)
240 TIGR01301 GPH_sucrose GPH fami 98.3 3.9E-05 8.4E-10 69.6 16.1 142 21-164 309-476 (477)
241 COG0738 FucP Fucose permease [ 98.3 1.4E-05 3E-10 68.9 12.3 143 5-152 259-402 (422)
242 KOG2532 Permease of the major 98.2 1E-05 2.2E-10 73.1 10.9 149 8-159 285-447 (466)
243 KOG3762 Predicted transporter 98.2 1.7E-05 3.6E-10 70.8 11.5 132 195-336 366-499 (618)
244 PF00083 Sugar_tr: Sugar (and 98.2 7.9E-09 1.7E-13 94.0 -9.7 157 6-165 277-442 (451)
245 PF00854 PTR2: POT family; In 98.2 2.2E-05 4.8E-10 69.6 11.6 111 48-158 2-122 (372)
246 KOG0252 Inorganic phosphate tr 98.2 3.1E-06 6.7E-11 74.0 5.5 159 4-165 326-503 (538)
247 KOG0255 Synaptic vesicle trans 98.2 0.00014 3.1E-09 67.5 17.0 150 21-171 354-504 (521)
248 PF12832 MFS_1_like: MFS_1 lik 98.2 1.4E-05 3E-10 52.9 7.4 61 205-266 5-65 (77)
249 PF12832 MFS_1_like: MFS_1 lik 98.2 6.5E-06 1.4E-10 54.4 5.8 55 3-57 21-75 (77)
250 TIGR00806 rfc RFC reduced fola 98.1 4.3E-05 9.2E-10 68.2 10.5 107 221-337 46-155 (511)
251 KOG2533 Permease of the major 98.0 2.1E-05 4.6E-10 71.5 8.4 141 5-147 296-444 (495)
252 PTZ00207 hypothetical protein; 98.0 0.00015 3.3E-09 67.3 12.9 150 6-159 377-552 (591)
253 PF06609 TRI12: Fungal trichot 97.9 0.0005 1.1E-08 63.7 15.4 111 18-128 350-461 (599)
254 KOG3574 Acetyl-CoA transporter 97.9 0.0023 4.9E-08 55.2 17.9 241 4-259 52-323 (510)
255 KOG2816 Predicted transporter 97.9 0.00037 8E-09 63.0 13.7 123 8-133 268-391 (463)
256 PF07672 MFS_Mycoplasma: Mycop 97.9 0.00026 5.6E-09 57.7 11.1 100 104-212 2-106 (267)
257 COG3104 PTR2 Dipeptide/tripept 97.5 0.0024 5.2E-08 57.1 12.2 144 17-160 324-488 (498)
258 PF03092 BT1: BT1 family; Int 97.5 0.0014 2.9E-08 59.4 10.9 123 14-136 252-382 (433)
259 PF06813 Nodulin-like: Nodulin 97.4 0.00074 1.6E-08 55.7 7.6 114 213-337 15-136 (250)
260 KOG1237 H+/oligopeptide sympor 97.4 0.0022 4.9E-08 59.6 11.6 154 4-157 60-243 (571)
261 COG3202 ATP/ADP translocase [E 97.4 0.097 2.1E-06 47.1 26.1 247 15-265 59-351 (509)
262 TIGR00880 2_A_01_02 Multidrug 97.3 0.00043 9.3E-09 51.4 5.0 87 242-337 4-92 (141)
263 KOG2615 Permease of the major 97.3 0.0018 3.9E-08 55.9 8.5 122 10-133 290-413 (451)
264 PRK03612 spermidine synthase; 97.2 0.013 2.7E-07 54.3 14.5 141 10-152 43-190 (521)
265 PF13000 Acatn: Acetyl-coenzym 97.2 0.041 8.9E-07 49.5 16.4 67 194-265 272-338 (544)
266 TIGR00805 oat sodium-independe 97.2 0.00069 1.5E-08 64.3 5.6 71 215-294 47-117 (633)
267 PF06779 DUF1228: Protein of u 97.1 0.0032 6.9E-08 42.1 6.7 78 213-300 5-82 (85)
268 KOG1330 Sugar transporter/spin 97.0 0.0015 3.2E-08 57.8 6.2 121 206-336 39-161 (493)
269 TIGR00939 2a57 Equilibrative N 97.0 0.088 1.9E-06 47.6 17.1 52 71-127 105-156 (437)
270 KOG3098 Uncharacterized conser 96.8 0.028 6E-07 50.6 12.4 100 28-128 290-408 (461)
271 KOG1479 Nucleoside transporter 96.5 0.17 3.8E-06 44.6 14.6 33 72-105 117-149 (406)
272 PF05631 DUF791: Protein of un 96.3 0.047 1E-06 47.2 10.0 37 230-266 63-99 (354)
273 KOG2563 Permease of the major 96.2 0.015 3.2E-07 51.5 6.6 149 13-161 297-452 (480)
274 PF02487 CLN3: CLN3 protein; 95.7 0.13 2.9E-06 45.6 10.2 112 17-132 281-395 (402)
275 KOG3097 Predicted membrane pro 95.5 0.82 1.8E-05 39.1 13.5 74 26-102 67-140 (390)
276 PF06963 FPN1: Ferroportin1 (F 95.4 0.47 1E-05 42.8 12.9 121 9-129 285-413 (432)
277 KOG3880 Predicted small molecu 95.4 0.19 4.1E-06 42.5 9.4 137 21-164 66-204 (409)
278 KOG0637 Sucrose transporter an 93.9 0.033 7.2E-07 49.5 1.8 89 202-295 34-122 (498)
279 KOG2325 Predicted transporter/ 92.9 0.13 2.9E-06 46.6 4.2 109 202-320 36-148 (488)
280 PF02990 EMP70: Endomembrane p 91.9 1.2 2.5E-05 41.5 9.1 77 188-265 246-322 (521)
281 KOG4332 Predicted sugar transp 91.4 4.8 0.0001 33.8 10.9 136 19-154 284-426 (454)
282 PF05978 UNC-93: Ion channel r 91.0 5.7 0.00012 30.3 11.0 86 240-335 41-128 (156)
283 TIGR00926 2A1704 Peptide:H+ sy 90.0 1.9 4E-05 41.4 8.7 72 215-294 2-73 (654)
284 KOG2601 Iron transporter [Inor 89.1 4.8 0.0001 35.4 9.4 122 29-150 75-217 (503)
285 PF07857 DUF1632: CEO family ( 89.0 6.8 0.00015 32.5 10.1 25 206-230 184-208 (254)
286 COG0477 ProP Permeases of the 88.2 5.6 0.00012 33.2 9.9 49 217-266 19-69 (338)
287 TIGR00939 2a57 Equilibrative N 88.1 7.4 0.00016 35.4 10.8 62 70-131 370-431 (437)
288 KOG3810 Micronutrient transpor 87.7 5.1 0.00011 34.9 8.7 134 20-158 274-420 (433)
289 TIGR00769 AAA ADP/ATP carrier 85.7 29 0.00063 32.0 15.7 70 82-151 276-346 (472)
290 KOG4830 Predicted sugar transp 85.6 0.067 1.5E-06 43.9 -3.2 65 190-254 191-255 (412)
291 PF01770 Folate_carrier: Reduc 84.5 6.8 0.00015 35.1 8.4 99 16-116 284-384 (412)
292 KOG3626 Organic anion transpor 84.3 2.7 5.8E-05 40.4 6.1 127 7-133 418-648 (735)
293 PF01733 Nucleoside_tran: Nucl 81.9 0.39 8.5E-06 41.4 -0.3 19 241-259 187-205 (309)
294 PF03137 OATP: Organic Anion T 79.9 0.56 1.2E-05 43.8 0.0 77 208-294 11-87 (539)
295 KOG1278 Endosomal membrane pro 79.9 2.9 6.2E-05 38.3 4.3 34 233-266 356-389 (628)
296 KOG3880 Predicted small molecu 78.0 13 0.00028 32.0 7.3 65 67-131 337-401 (409)
297 KOG3574 Acetyl-CoA transporter 75.5 23 0.0005 31.6 8.3 63 200-266 31-98 (510)
298 KOG1479 Nucleoside transporter 75.3 31 0.00068 30.9 9.3 106 21-128 286-399 (406)
299 PF03219 TLC: TLC ATP/ADP tran 75.0 72 0.0016 29.7 15.6 73 82-154 292-365 (491)
300 COG3559 TnrB3 Putative exporte 71.8 77 0.0017 28.6 16.6 64 200-263 298-371 (536)
301 COG5336 Uncharacterized protei 70.0 22 0.00048 24.9 5.6 38 21-58 46-84 (116)
302 PF01733 Nucleoside_tran: Nucl 69.7 1.7 3.7E-05 37.4 0.4 107 22-129 187-305 (309)
303 PF06912 DUF1275: Protein of u 68.6 59 0.0013 26.0 15.0 36 104-139 158-193 (209)
304 PRK03612 spermidine synthase; 67.9 1.1E+02 0.0023 28.8 11.6 54 209-262 23-76 (521)
305 PF12805 FUSC-like: FUSC-like 67.3 57 0.0012 27.7 9.1 37 51-88 3-39 (284)
306 KOG1237 H+/oligopeptide sympor 65.1 36 0.00079 32.3 8.0 63 71-133 457-519 (571)
307 PF07760 DUF1616: Protein of u 63.1 96 0.0021 26.5 11.6 82 75-158 22-107 (287)
308 PF13000 Acatn: Acetyl-coenzym 60.5 84 0.0018 29.2 9.0 65 74-138 407-471 (544)
309 PF11947 DUF3464: Protein of u 59.9 49 0.0011 25.1 6.4 82 39-123 56-145 (153)
310 PF02694 UPF0060: Uncharacteri 59.2 29 0.00063 24.3 4.6 50 15-64 52-101 (107)
311 PF05255 UPF0220: Uncharacteri 55.7 94 0.002 24.0 9.1 57 100-156 14-76 (166)
312 TIGR01667 YCCS_YHJK integral m 54.2 1.3E+02 0.0028 29.5 9.9 56 32-88 38-97 (701)
313 PF00909 Ammonium_transp: Ammo 53.3 1.6E+02 0.0035 26.5 9.8 53 76-128 274-326 (399)
314 TIGR01666 YCCS hypothetical me 53.2 1.6E+02 0.0034 28.9 10.2 55 33-88 39-97 (704)
315 PF02990 EMP70: Endomembrane p 52.9 1.2E+02 0.0027 28.4 9.3 33 236-268 297-329 (521)
316 PRK02237 hypothetical protein; 52.7 53 0.0012 23.1 5.1 48 17-64 56-103 (109)
317 KOG1277 Endosomal membrane pro 52.5 25 0.00055 31.6 4.4 12 191-202 280-291 (593)
318 KOG2881 Predicted membrane pro 52.2 1.4E+02 0.003 25.0 11.6 17 136-152 128-144 (294)
319 COG4769 Predicted membrane pro 51.4 32 0.0007 26.2 4.2 53 25-85 81-133 (181)
320 TIGR00836 amt ammonium transpo 51.0 1.8E+02 0.0039 26.3 9.6 51 78-128 281-331 (403)
321 PF07672 MFS_Mycoplasma: Mycop 50.0 1.3E+02 0.0028 25.3 7.9 101 21-123 145-254 (267)
322 TIGR03644 marine_trans_1 proba 50.0 2E+02 0.0043 26.0 9.9 49 79-128 296-344 (404)
323 PF02632 BioY: BioY family; I 50.0 81 0.0018 23.8 6.3 25 24-48 60-84 (148)
324 KOG2601 Iron transporter [Inor 46.7 1.5E+02 0.0033 26.6 8.1 65 203-267 30-94 (503)
325 PRK10720 uracil transporter; P 46.3 2.3E+02 0.0051 25.8 10.1 54 43-97 298-352 (428)
326 PF10183 ESSS: ESSS subunit of 46.0 34 0.00073 24.1 3.5 32 132-163 54-85 (105)
327 PF03596 Cad: Cadmium resistan 45.6 1.5E+02 0.0033 23.5 7.4 10 219-228 113-122 (191)
328 COG5336 Uncharacterized protei 45.5 52 0.0011 23.2 4.1 23 244-266 50-72 (116)
329 COG1268 BioY Uncharacterized c 44.7 93 0.002 24.5 6.0 23 24-46 89-111 (184)
330 PRK02935 hypothetical protein; 38.9 1.3E+02 0.0029 21.0 5.3 37 274-310 13-49 (110)
331 PF13386 DsbD_2: Cytochrome C 38.9 2E+02 0.0043 22.8 17.0 34 233-266 147-180 (199)
332 PRK13629 threonine/serine tran 38.5 3.2E+02 0.0069 25.1 15.9 44 103-151 19-62 (443)
333 PF03706 UPF0104: Uncharacteri 37.4 2.5E+02 0.0054 23.6 15.4 51 13-63 23-73 (294)
334 PF04024 PspC: PspC domain; I 37.3 1E+02 0.0022 19.1 4.4 27 137-163 31-60 (61)
335 PF12273 RCR: Chitin synthesis 36.8 18 0.00038 26.6 1.0 14 138-151 1-14 (130)
336 PF03547 Mem_trans: Membrane t 35.6 3.2E+02 0.0068 24.3 9.7 15 31-45 9-23 (385)
337 PF11947 DUF3464: Protein of u 33.9 95 0.0021 23.6 4.4 14 325-338 123-136 (153)
338 PF11023 DUF2614: Protein of u 32.1 1.7E+02 0.0036 20.9 5.0 35 274-308 12-46 (114)
339 PRK10666 ammonium transporter; 31.8 4E+02 0.0088 24.3 10.5 50 79-128 306-355 (428)
340 COG4262 Predicted spermidine s 31.1 3.9E+02 0.0084 23.9 16.0 142 13-156 39-188 (508)
341 PF11151 DUF2929: Protein of u 31.0 1.3E+02 0.0028 18.4 5.8 39 118-156 12-50 (57)
342 PF02667 SCFA_trans: Short cha 30.7 2.7E+02 0.0059 25.5 7.4 9 154-162 207-215 (453)
343 PRK00293 dipZ thiol:disulfide 30.6 4.9E+02 0.011 24.9 20.2 30 234-263 323-352 (571)
344 PRK12489 anaerobic C4-dicarbox 30.3 4.4E+02 0.0095 24.3 14.1 12 109-120 130-141 (443)
345 PF10101 DUF2339: Predicted me 29.6 5.6E+02 0.012 25.3 10.8 107 44-155 1-108 (745)
346 COG1983 PspC Putative stress-r 29.4 1.6E+02 0.0034 19.0 4.2 34 131-164 21-65 (70)
347 COG1280 RhtB Putative threonin 29.3 3E+02 0.0065 22.1 18.7 30 202-231 114-143 (208)
348 PF10785 NADH-u_ox-rdase: NADH 28.9 1.9E+02 0.004 19.5 5.4 36 29-64 30-72 (86)
349 PF07456 Hpre_diP_synt_I: Hept 28.6 1.9E+02 0.0041 21.9 5.3 51 24-82 68-118 (148)
350 PF04226 Transgly_assoc: Trans 27.9 1.3E+02 0.0029 17.5 5.3 19 137-155 24-42 (48)
351 PF15061 DUF4538: Domain of un 27.5 54 0.0012 20.1 1.8 25 135-159 3-27 (58)
352 TIGR00844 c_cpa1 na(+)/h(+) an 27.2 6.5E+02 0.014 25.3 21.5 38 112-149 105-142 (810)
353 PF02694 UPF0060: Uncharacteri 27.2 78 0.0017 22.2 2.8 31 236-266 54-84 (107)
354 PF11872 DUF3392: Protein of u 27.1 2.3E+02 0.005 20.0 7.4 39 193-231 41-80 (106)
355 PRK11017 codB cytosine permeas 26.6 4.8E+02 0.01 23.5 16.4 55 99-153 2-57 (404)
356 PF09527 ATPase_gene1: Putativ 26.2 1.5E+02 0.0033 17.7 5.8 36 24-59 7-43 (55)
357 COG1811 Uncharacterized membra 26.1 3.5E+02 0.0075 22.0 6.4 53 248-309 15-67 (228)
358 PRK10263 DNA translocase FtsK; 25.0 4.8E+02 0.01 27.8 8.7 18 120-137 143-160 (1355)
359 PF06783 UPF0239: Uncharacteri 24.8 1.6E+02 0.0035 19.7 3.7 20 138-157 23-42 (85)
360 TIGR02978 phageshock_pspC phag 24.1 2.2E+02 0.0047 20.7 4.7 35 131-165 20-64 (121)
361 PF13940 Ldr_toxin: Toxin Ldr, 23.9 1E+02 0.0023 16.4 2.2 18 244-261 16-33 (35)
362 KOG4830 Predicted sugar transp 23.8 81 0.0018 26.6 2.8 61 205-266 22-91 (412)
363 PRK10697 DNA-binding transcrip 23.0 73 0.0016 23.0 2.1 17 149-165 53-69 (118)
364 PRK11588 hypothetical protein; 22.8 6.4E+02 0.014 23.7 19.4 28 37-64 136-165 (506)
365 COG1457 CodB Purine-cytosine p 22.5 6.1E+02 0.013 23.3 14.8 146 98-265 11-157 (442)
366 COG3619 Predicted membrane pro 22.0 4.5E+02 0.0097 21.6 17.0 40 97-136 156-196 (226)
367 PF06645 SPC12: Microsomal sig 22.0 2.4E+02 0.0052 18.4 4.9 36 112-150 12-47 (76)
368 PF13493 DUF4118: Domain of un 21.7 1.5E+02 0.0032 20.4 3.5 23 25-47 83-105 (105)
369 COG2076 EmrE Membrane transpor 21.2 3.1E+02 0.0067 19.4 8.3 65 34-99 17-81 (106)
370 PRK09412 anaerobic C4-dicarbox 21.2 6.4E+02 0.014 23.1 12.1 9 12-20 39-47 (433)
No 1
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.7e-40 Score=292.41 Aligned_cols=330 Identities=34% Similarity=0.660 Sum_probs=304.8
Q ss_pred HhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHhhhhc
Q 019567 9 AAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGV 88 (339)
Q Consensus 9 ~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~~~ 88 (339)
+.++++|++|-+++.+.+..|+.+++++.|+++||+|.|+++..+.++.++++++.+++...+++.+++.|++||++.|.
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~ 144 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGV 144 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhH
Confidence 56799999999999999999999999999999999999999999999999999999998778888899999999999999
Q ss_pred chhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhh-ccchHHHHHHHHHHHHHHHHHHhhccCCCCCCC
Q 019567 89 AMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLST-IGISGPFILFSSLGLLWLSTWTSKVTNDPCNSP 167 (339)
Q Consensus 89 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~-~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (339)
.+|....+.++|.|++||++..++...+..+|.+++-++++++.+. +||+.+|++.++.+++..++++.+..|+|++++
T Consensus 145 ~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h~ 224 (466)
T KOG2532|consen 145 LFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKHP 224 (466)
T ss_pred HHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcccCC
Confidence 9999999999999999999999999999999999999999999998 999999999999999999999999999999999
Q ss_pred CCChHHHHHHHhCCccccccC-CCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccchhhHhhHHhH
Q 019567 168 FVSKSELRLIQAGKSDSVKKR-NPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPW 246 (339)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~ 246 (339)
...++|++..++++.+++.++ .+.|++++++++.+|...+..++...+.+.+..|.|.|+++++|+|..+.|++.++..
T Consensus 225 ~is~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~ 304 (466)
T KOG2532|consen 225 NISEKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPF 304 (466)
T ss_pred CCCHHHHHHHHhcccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHH
Confidence 999999888877665544333 6789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhcccc--hhHHHHHHHHHHHHhhhcccchhhhhh
Q 019567 247 GTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKS--PAVAAVLITIALSLSSFSQAGYLLNIQ 324 (339)
Q Consensus 247 ~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (339)
+...+..++.|.++||+.+|.......||..-.++....+++++.+.+.+. .+...+++.+..++.++..++......
T Consensus 305 l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~ 384 (466)
T KOG2532|consen 305 LAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKNHQ 384 (466)
T ss_pred HHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhhhh
Confidence 999999999999999998876667777899999999999999999988763 345677777778889999999999998
Q ss_pred -hcccchhhhhhhhc
Q 019567 325 -IAQDFSTALQIQQE 338 (339)
Q Consensus 325 -~~p~~~g~~~g~q~ 338 (339)
.+|+|.+.++|..|
T Consensus 385 ~~apq~a~~l~g~~~ 399 (466)
T KOG2532|consen 385 DIAPQHAGFVMGIIN 399 (466)
T ss_pred hccchHHHHHHHHHH
Confidence 69999999998754
No 2
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.7e-39 Score=269.92 Aligned_cols=326 Identities=19% Similarity=0.215 Sum_probs=266.7
Q ss_pred CcchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHH
Q 019567 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (339)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l 81 (339)
+...|++.+|.++|.+|+|.+.+.+.+.|.++.++.|.++||.+.|+.+..++++.++..+++++ +++.+.+.+..++
T Consensus 49 ~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gf--s~s~~~~~~l~~l 126 (448)
T COG2271 49 NLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGF--SPSLFLFAVLWVL 126 (448)
T ss_pred hhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhh--hhHHHHHHHHHHH
Confidence 56889999999999999999999999999999999999999999999999999999999999955 8899999999999
Q ss_pred HHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHH--HHhhhhccchHHHHHHHHHHHHHHHHHHhhc
Q 019567 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLT--PIMLSTIGISGPFILFSSLGLLWLSTWTSKV 159 (339)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~--~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~ 159 (339)
.|..+|.-+|++...+++|+|+++||+..++++.+.++|..+.|++. +++..+.+||..|++.++++++..+..++..
T Consensus 127 ng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~ 206 (448)
T COG2271 127 NGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLL 206 (448)
T ss_pred HHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999 8999989999999999999999999999999
Q ss_pred cCCCCCCCCCChHHHHHHHhCC-ccccccC----CCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCc
Q 019567 160 TNDPCNSPFVSKSELRLIQAGK-SDSVKKR----NPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVN 234 (339)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~ 234 (339)
+|+|++..-.+-+|......+. +++++++ .+.-.+.+++||.+|.++++.++.+..-++...|.|.|+.|+.|+|
T Consensus 207 rd~Pqs~GLP~ie~~~~d~~e~~~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s 286 (448)
T COG2271 207 RDRPQSEGLPPIEEYRGDPLEIYEEEKENEGLTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFS 286 (448)
T ss_pred CCCccccCCCCHHHhhcCchhhhhhhccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCC
Confidence 9999876655444322111111 1111111 1223566889999999999999999999999999999999999999
Q ss_pred cchhhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhcccch--hHHHHH-HHHHHHH
Q 019567 235 LKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSP--AVAAVL-ITIALSL 311 (339)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~ 311 (339)
..+++...+.+-.++++|.++.||++||+.+.+ |....+++.+...++++.+...++. ....++ .++++..
T Consensus 287 ~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgr------R~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~I 360 (448)
T COG2271 287 LVKANWAISLFEVAGLPGTLLAGWLSDKLFKGR------RGPMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLI 360 (448)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccc------cchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999987432 4566677777777777777777654 333332 2233333
Q ss_pred hhhcccchhhhhh-hcc-cchhhhhhh
Q 019567 312 SSFSQAGYLLNIQ-IAQ-DFSTALQIQ 336 (339)
Q Consensus 312 ~~~~~~~~~~~~~-~~p-~~~g~~~g~ 336 (339)
.+-. ........ ..| +..|++.|.
T Consensus 361 yGPq-mLiGl~a~e~~pK~AaGtA~Gf 386 (448)
T COG2271 361 YGPQ-MLIGLAAAEFVPKKAAGTATGF 386 (448)
T ss_pred hhHH-HHHHHHHhccccHhhccchhch
Confidence 3322 22222222 556 456777664
No 3
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.1e-37 Score=264.63 Aligned_cols=305 Identities=21% Similarity=0.251 Sum_probs=249.5
Q ss_pred cchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHH
Q 019567 3 VAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFF 82 (339)
Q Consensus 3 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~ 82 (339)
.++|++.+|+|+|..+.|+..|.|.+++.+++|+...+.||+.||++++..+.++.++++++ ++++||+.++++|++.
T Consensus 34 gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~--alAp~f~~Ll~aR~~~ 111 (394)
T COG2814 34 GLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLS--ALAPSFAVLLLARALA 111 (394)
T ss_pred hchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHH--HHhccHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999 6799999999999999
Q ss_pred HhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhccCC
Q 019567 83 GLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTND 162 (339)
Q Consensus 83 G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~ 162 (339)
|+..|..++...++..|..|+++|++++++...+.+++.++|.+++.++.|.+|||..|++.+.++++..+..+..+|
T Consensus 112 g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP-- 189 (394)
T COG2814 112 GLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP-- 189 (394)
T ss_pred HHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999888888888
Q ss_pred CCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccchhhHhh
Q 019567 163 PCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFS 242 (339)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~ 242 (339)
|++.+. +++.+..+..+++|+|+++...+..++...+.+...+|+.++++|..|++.+..++..
T Consensus 190 ~~~~~~----------------~~~~~~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~L 253 (394)
T COG2814 190 PSEISG----------------SLPGPLRTLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVL 253 (394)
T ss_pred CccCCC----------------CCCcchhHHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHH
Confidence 221111 1111222357789999999999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhcccc-hhHHHHHHHHHHHHhhhcccchhh
Q 019567 243 AVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKS-PAVAAVLITIALSLSSFSQAGYLL 321 (339)
Q Consensus 243 ~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 321 (339)
..+++++.+|+.++|++.|| +.+ ..+.......+...+.+.+..+ .+.......+..+...........
T Consensus 254 l~~Gv~~~~Gn~~gGrl~dr-~~~---------~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~ 323 (394)
T COG2814 254 LAFGIAGFIGNLLGGRLADR-GPR---------RALIAALLLLALALLALTFTGASPALALALLFLWGFAFSPALQGLQT 323 (394)
T ss_pred HHHHHHHHHHHHHHhhhccc-cch---------hHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHH
Confidence 99999999999999999999 543 3444554555555555554443 333333222211111111122222
Q ss_pred hhh-hcccchhhhhhhh
Q 019567 322 NIQ-IAQDFSTALQIQQ 337 (339)
Q Consensus 322 ~~~-~~p~~~g~~~g~q 337 (339)
-.. ..|+.++..++.+
T Consensus 324 ~~a~~~p~~~~~a~sl~ 340 (394)
T COG2814 324 RLARLAPDAADLAGSLN 340 (394)
T ss_pred HhcccCCCchHHHHHHH
Confidence 222 4457777776654
No 4
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=1.7e-36 Score=265.97 Aligned_cols=311 Identities=13% Similarity=0.049 Sum_probs=226.7
Q ss_pred CCcchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHH
Q 019567 1 MSVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRA 80 (339)
Q Consensus 1 ~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 80 (339)
+++.+|.+++|+|+|+++.|++.+.+.+++.+++++.|+++||+|||+++..+......+.... ...+|++.+++.|+
T Consensus 10 ~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~R~ 87 (368)
T TIGR00903 10 FSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRL--LDPFNYEWLLACQL 87 (368)
T ss_pred HHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHH--HHhccHHHHHHHHH
Confidence 3688999999999999999999999999999999999999999999988766555544443322 22379999999999
Q ss_pred HHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhcc
Q 019567 81 FFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVT 160 (339)
Q Consensus 81 l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~ 160 (339)
++|++.+. .+.....++|++|+|+|++++++.+.+..+|..++++++.++.+++|||+.|++.++++++..++.++..|
T Consensus 88 l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp 166 (368)
T TIGR00903 88 LAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAALP 166 (368)
T ss_pred HHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999986 56666777999999999999999999999999999999999999999999999999998888888888889
Q ss_pred CCCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccchhhH
Q 019567 161 NDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAW 240 (339)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~ 240 (339)
|+|+++++..+.+ +..+++++++++|.+|...+..++....++.+.+|+|+|+++ .|++.+ .+.
T Consensus 167 ~~p~~~~~~~~~~--------------~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~~ 230 (368)
T TIGR00903 167 ALPFQAAEGFGFK--------------DAVKEFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLEDI-AGD 230 (368)
T ss_pred CCCCCCCCCcchH--------------HHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChH-HHH
Confidence 8876542211000 001246789999999999999999999999999999999977 578764 555
Q ss_pred hhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhcccchhHHHHHHHHHHHHhhhcccchh
Q 019567 241 FSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYL 320 (339)
Q Consensus 241 ~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (339)
......+.+.++ .++++||..|++. |+.......++.++....+....+.........+..++.....+...
T Consensus 231 ~~~l~~~~g~~g---~~~~~d~~~r~~~-----r~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 302 (368)
T TIGR00903 231 AVALAILAGLIG---VAVIPDRVARAGL-----RSIYIRAAALLIAAFFLALAFELNRLALFAFIGIAGLLMLPAYAIIM 302 (368)
T ss_pred HHHHHHHHHHHH---HHHhhHHhhhhhh-----HHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhhhhhHHHHH
Confidence 555555544444 5788898876532 11222222333333333434333333333333333333333333344
Q ss_pred hhhh--hcccchhhhhhhhc
Q 019567 321 LNIQ--IAQDFSTALQIQQE 338 (339)
Q Consensus 321 ~~~~--~~p~~~g~~~g~q~ 338 (339)
.... ..++.+|+.+|..+
T Consensus 303 ~~~~~~~p~~~rgt~~G~~~ 322 (368)
T TIGR00903 303 DWIGKFCDKELHGKAAGAIG 322 (368)
T ss_pred HHHHHhcchhhcCcccchhh
Confidence 4545 44468898888754
No 5
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=100.00 E-value=2.4e-36 Score=274.88 Aligned_cols=328 Identities=27% Similarity=0.459 Sum_probs=253.7
Q ss_pred HhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHhhhhcch
Q 019567 11 KFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGVAM 90 (339)
Q Consensus 11 ~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~~~~~ 90 (339)
|+++|..+.|++.+.+.+++.+++++.|+++||+|||+++..+.++++++.++++++...+++.+++.|+++|++.+...
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~ 149 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVS 149 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccch
Confidence 89999999999999999999999999999999999999999999999999888755445678889999999999999999
Q ss_pred hhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhc-cchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCC
Q 019567 91 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTI-GISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFV 169 (339)
Q Consensus 91 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~-~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (339)
+....++.|++|+++|++++++...+..+|..+++++++.+.+.. +||+.|++.++++++..+.++...+|+|+++++.
T Consensus 150 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~ 229 (465)
T TIGR00894 150 PATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPCI 229 (465)
T ss_pred hhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCCCC
Confidence 999999999999999999999999999999999999999999884 9999999999988888777777777877665544
Q ss_pred ChHHHHHHHhCCcc-ccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccchhhHhhHHhHHH
Q 019567 170 SKSELRLIQAGKSD-SVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGT 248 (339)
Q Consensus 170 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~ 248 (339)
+++|++..++..++ +++++.+.++++++++|.+|...+..++.....+.+.+|+|.|+++.+|++..+.+....+..++
T Consensus 230 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~ 309 (465)
T TIGR00894 230 SKFEKKYINSSLQGQKGSTRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLF 309 (465)
T ss_pred CHHHHHHHHhhcccccCCCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHH
Confidence 44444333222111 11122345689999999999999999999999999999999999998999999999999999999
Q ss_pred HHHHHhhhhhhhHHHHHhccchHH-HHHHHHHHHhhhhhhHhhhhhc-ccchhHHHHHHHHHHHHhhhcccchhhhhh-h
Q 019567 249 MAVSGYMAGKASDSLIKAGYSLTL-VRKIMQSIGFIGPGVSLLCLNY-AKSPAVAAVLITIALSLSSFSQAGYLLNIQ-I 325 (339)
Q Consensus 249 ~~~~~~~~g~l~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 325 (339)
..++.++.|+++||+++|+..... .++.....+..+..+...+... ..+.......+.+..++.+........... .
T Consensus 310 ~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 389 (465)
T TIGR00894 310 AWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDL 389 (465)
T ss_pred HHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhc
Confidence 999999999999999876533322 2223323332222222222222 223333333344444444444444444445 7
Q ss_pred cccchhhhhhhhc
Q 019567 326 AQDFSTALQIQQE 338 (339)
Q Consensus 326 ~p~~~g~~~g~q~ 338 (339)
.|++.|.++|..+
T Consensus 390 ~~~~~g~~~g~~~ 402 (465)
T TIGR00894 390 APRFLGFIKGITG 402 (465)
T ss_pred ChhHHHHHHHHHH
Confidence 7888888888764
No 6
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=3.5e-36 Score=268.96 Aligned_cols=262 Identities=16% Similarity=0.251 Sum_probs=216.7
Q ss_pred CcchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHH
Q 019567 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (339)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l 81 (339)
+...|.+++|+|+|+.+.|++.+.+.+++.+++++.|+++||+|||+++..+.++++++++++ +.++|++.+++.|++
T Consensus 28 ~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~r~l 105 (412)
T TIGR02332 28 GFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTAT--MFATGPESLYLLRIL 105 (412)
T ss_pred HHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHH--HHhcCHHHHHHHHHH
Confidence 456789999999999999999999999999999999999999999999999999999999999 558999999999999
Q ss_pred HHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhh------hccchHHHHHHHHHHHHHHHHH
Q 019567 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLS------TIGISGPFILFSSLGLLWLSTW 155 (339)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~------~~~w~~~f~~~~~~~~~~~~~~ 155 (339)
+|++.+...+....++.|++|+++|++++++++.+.++|..+++.+++++.+ ..|||+.|++.++++++..++.
T Consensus 106 ~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~ 185 (412)
T TIGR02332 106 VGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMT 185 (412)
T ss_pred HHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999988864 3699999999988888777777
Q ss_pred HhhccCCCCCCCCCChHHHHHHHh----CC---ccccc--cCC----CccHHHHhcchhHHHHHHHHHhhHHHHHHHHHh
Q 019567 156 TSKVTNDPCNSPFVSKSELRLIQA----GK---SDSVK--KRN----PPSLRHLLSKLPSWTVIIANITNNWGYFVLLSW 222 (339)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~--~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (339)
+++.||+|++.+..++++++...+ +. +++++ ++. ...+++++ +|.+|...+..++....++.+.+|
T Consensus 186 ~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 264 (412)
T TIGR02332 186 WFWLDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREIF-TPAIMLYTLAYFCLTNTLSAINIW 264 (412)
T ss_pred hhccCCCcccCCCCCHHHHHHHHHHHHhccccccccccccccccccHHHHHHHhc-ChHHHHHHHHHHHHHHHHHHHHHH
Confidence 777888887644322222221110 10 00000 011 11234444 578888888888888889999999
Q ss_pred hhhhhhhh-hCCccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHh
Q 019567 223 MPIYFNTV-FNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKA 266 (339)
Q Consensus 223 ~~~~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~ 266 (339)
+|.++++. .|.+..+++.......++.+++.++.|+++||+++|
T Consensus 265 ~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r 309 (412)
T TIGR02332 265 TPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKER 309 (412)
T ss_pred HHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCcc
Confidence 99999883 367778889889999999999999999999999865
No 7
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=1.3e-35 Score=264.07 Aligned_cols=242 Identities=17% Similarity=0.184 Sum_probs=210.7
Q ss_pred cchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHH
Q 019567 3 VAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFF 82 (339)
Q Consensus 3 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~ 82 (339)
+++|.+.+|+|.|+++.++..+.+.+++.+++++.|+++||+|||+++..+..+..++++.+ ..++|++.+++.|+++
T Consensus 30 ~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~r~~~ 107 (390)
T PRK03545 30 GLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLS--ALAWNFTVLLISRIGI 107 (390)
T ss_pred cchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHH--HHhccHHHHHHHHHHH
Confidence 46799999999999999999999999999999999999999999999999999999999999 5589999999999999
Q ss_pred HhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhccCC
Q 019567 83 GLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTND 162 (339)
Q Consensus 83 G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~ 162 (339)
|++.+...+...+++.|++|+|+|++++++.+.+.++|..++|++++.+.++.|||+.|++.++++++..+..+...||+
T Consensus 108 G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~ 187 (390)
T PRK03545 108 AFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLL 187 (390)
T ss_pred HHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 99999889999999999999999999999999999999999999999999999999999999988877666666555654
Q ss_pred CCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccchhhHhh
Q 019567 163 PCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFS 242 (339)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~ 242 (339)
+++++ +..++.++.+|+|+++......++.....+....+.+.++++..|.++.+.+.+.
T Consensus 188 ~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~ 247 (390)
T PRK03545 188 PSEHS--------------------GSLKSLPLLFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLL 247 (390)
T ss_pred CCCCc--------------------chHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHH
Confidence 33211 0011356788899888766666666666666678888898888899999999999
Q ss_pred HHhHHHHHHHHhhhhhhhHHHHHh
Q 019567 243 AVPWGTMAVSGYMAGKASDSLIKA 266 (339)
Q Consensus 243 ~~~~~~~~~~~~~~g~l~d~~~~~ 266 (339)
....++.++++++.+++.||.++|
T Consensus 248 ~~~~~~~~~g~~~~g~l~dr~~~~ 271 (390)
T PRK03545 248 LLFGGAGIIGSVLFSRLGNRHPSG 271 (390)
T ss_pred HHHHHHHHHHHHHHHHHhhccchh
Confidence 999999999999999999998754
No 8
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=3.4e-35 Score=261.64 Aligned_cols=264 Identities=26% Similarity=0.499 Sum_probs=226.6
Q ss_pred CcchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHH
Q 019567 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (339)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l 81 (339)
++..|.+++++|.|+.+.+++.+.+.++..++.++.|+++||+|||+++..+.++.+++.+++ +.++|++.+++.|++
T Consensus 14 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l 91 (399)
T TIGR00893 14 SFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQ--AFAGAYVSLYILRVL 91 (399)
T ss_pred hHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHH--HHHcCHHHHHHHHHH
Confidence 567899999999999999999999999999999999999999999999999999999999998 558899999999999
Q ss_pred HHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhccC
Q 019567 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTN 161 (339)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~ 161 (339)
.|++.+...+....++.|++|+|+|++++++.+...++|..+++.+++.+.+..+||+.|++.++..++..+..+...||
T Consensus 92 ~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (399)
T TIGR00893 92 LGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIPD 171 (399)
T ss_pred HHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhheecC
Confidence 99999999999999999999999999999999999999999999999999999999999999988887777766666677
Q ss_pred CCCCCCCCChHHHHHHHhC-----CccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccc
Q 019567 162 DPCNSPFVSKSELRLIQAG-----KSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLK 236 (339)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~ 236 (339)
++++++..++++++...+. +++++++..+.+.++.+++|+++...+..++..........+.|.|+++.+|.++.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (399)
T TIGR00893 172 PPQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSIL 251 (399)
T ss_pred CCCccccCCHHHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHH
Confidence 6654433332222211111 11112223344677889999999999999999999999999999999998899999
Q ss_pred hhhHhhHHhHHHHHHHHhhhhhhhHHHHHhc
Q 019567 237 QAAWFSAVPWGTMAVSGYMAGKASDSLIKAG 267 (339)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~ 267 (339)
+.+.+.....++.+++.++.|++.||+++|+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 282 (399)
T TIGR00893 252 EAGFMASLPGIVGFIGMILGGRLSDLLLRRG 282 (399)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 9999999999999999999999999999873
No 9
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=4.1e-36 Score=273.09 Aligned_cols=265 Identities=17% Similarity=0.152 Sum_probs=216.5
Q ss_pred CcchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhh---hhhcchhHHHHH
Q 019567 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPW---AATHSTASLLAV 78 (339)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 78 (339)
++..|.+++|+|+|.++.|++.+.+.+++.+++++.|+++||+|||+++..+.++++++.+..++ ..++|++.+++.
T Consensus 49 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 128 (467)
T PRK09556 49 KAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMIAL 128 (467)
T ss_pred hhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHHHHH
Confidence 56789999999999999999999999999999999999999999999999998888887776633 125899999999
Q ss_pred HHHHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhc---cchHHHHHHHHHHHHHHHHH
Q 019567 79 RAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTI---GISGPFILFSSLGLLWLSTW 155 (339)
Q Consensus 79 r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~---~w~~~f~~~~~~~~~~~~~~ 155 (339)
|+++|++.+...|...++++||+|+++|++++|+...+.++|.++++.+..++.+.. +||..|.+.+++.++..++.
T Consensus 129 r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~ 208 (467)
T PRK09556 129 WALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIG 208 (467)
T ss_pred HHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999987776653 69999999888888777777
Q ss_pred HhhccCCCCCCCCCChHHHHHHH-hCCccccccCCC---cc-HHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhh
Q 019567 156 TSKVTNDPCNSPFVSKSELRLIQ-AGKSDSVKKRNP---PS-LRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTV 230 (339)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 230 (339)
++..+++|++.+..++++..... ..+++++++++. .. .++.+|+|.+|...+..++....+++...|+|.|+++.
T Consensus 209 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~ 288 (467)
T PRK09556 209 LRYGSDSPEELGWGKAEEIFGEPISEEDKETESTDMTKWQIFVEYVLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQE 288 (467)
T ss_pred HHhCCCChhhcCCCChhhcccCccchhhhccccccCcHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 77777776654333222210000 000000001110 11 23378999999999988888888888899999999998
Q ss_pred hCCccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHh
Q 019567 231 FNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKA 266 (339)
Q Consensus 231 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~ 266 (339)
+|++..+++.......++.++++++.|+++||+++|
T Consensus 289 ~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r 324 (467)
T PRK09556 289 LGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGR 324 (467)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 999999999999889999999999999999999876
No 10
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=3.4e-35 Score=268.55 Aligned_cols=326 Identities=17% Similarity=0.116 Sum_probs=248.4
Q ss_pred CcchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHH
Q 019567 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (339)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l 81 (339)
++.+|++.+|+|.+.++.+|+.+.|.+++.++.++.|+++||+|||+++..+..++.++++++ +.++|++.++++|++
T Consensus 26 ~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~--~~a~~~~~li~~r~l 103 (495)
T PRK14995 26 HVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAA--AFSPTASWLIATRAL 103 (495)
T ss_pred HHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH--HHcCCHHHHHHHHHH
Confidence 467899999999999999999999999999999999999999999999999999999999999 558999999999999
Q ss_pred HHhhhhcchhhhHHHHhhhC-CcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhcc
Q 019567 82 FGLAEGVAMPAMSTLTSRWF-PSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVT 160 (339)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~ 160 (339)
+|+|.+...+.....+.+++ |+++|+++++++.....+|..+||.+++.+.++.|||+.|++...++++..++..+..|
T Consensus 104 ~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~ 183 (495)
T PRK14995 104 LAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVP 183 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999998888888887776 67899999999999999999999999999999999999999988888777777777777
Q ss_pred CCCCCCCCCCh-HHHH-----------HHHhCCc------------------------cccccCCCccHHHHhcchhHHH
Q 019567 161 NDPCNSPFVSK-SELR-----------LIQAGKS------------------------DSVKKRNPPSLRHLLSKLPSWT 204 (339)
Q Consensus 161 ~~~~~~~~~~~-~~~~-----------~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~ 204 (339)
|+++++++..+ .+.. ..+.... .+.+.+.+....+++|+|.+..
T Consensus 184 ~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~e~~~~~p~~~~~lf~~~~~~~ 263 (495)
T PRK14995 184 RQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFIRTQLAASRPMIDMRLFTHRIILS 263 (495)
T ss_pred CCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHhCCcccHH
Confidence 76543322111 1100 0000000 0111112222357889999988
Q ss_pred HHHHHHhhHHHHHHHHHhhhhhhhhhhCCccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhh
Q 019567 205 VIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIG 284 (339)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 284 (339)
..+..++.....++...++|.|+++.+|+++.+++.......++..++.++.|++.||+++| ..+..+.++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~---------~~~~~g~~~ 334 (495)
T PRK14995 264 GVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLR---------LVATGGMAL 334 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch---------HHHHHHHHH
Confidence 88888888888888889999999999999999999999999999999999999999999865 344555555
Q ss_pred hhhHhhhhhcc---cchhHHHHHHHHHHHHhhhcccchhhhhh--hcccchhhhhhhhc
Q 019567 285 PGVSLLCLNYA---KSPAVAAVLITIALSLSSFSQAGYLLNIQ--IAQDFSTALQIQQE 338 (339)
Q Consensus 285 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~~g~~~g~q~ 338 (339)
..++..++... ++.+.......+.+...+...+....... ..++++|...+..+
T Consensus 335 ~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~ 393 (495)
T PRK14995 335 SALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIET 393 (495)
T ss_pred HHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHH
Confidence 55554443321 23333333333333333444333333333 56677888776643
No 11
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=1.8e-34 Score=259.91 Aligned_cols=263 Identities=16% Similarity=0.186 Sum_probs=214.6
Q ss_pred CcchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHH
Q 019567 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (339)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l 81 (339)
++.+|.+.+|+|+|+++.+++.+.+.+++.+++++.|+++||+|||+++.++.++.+++.+++ ..++|++.+++.|++
T Consensus 43 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~l 120 (434)
T PRK11663 43 NAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILF--GFSSSLWAFALLWVL 120 (434)
T ss_pred HHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHH--HHHhHHHHHHHHHHH
Confidence 467899999999999999999999999999999999999999999999999999999999988 558999999999999
Q ss_pred HHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhccC
Q 019567 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTN 161 (339)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~ 161 (339)
.|++.|...+...+++.|++|+++|++++++.+.+.++|..++|.+.+.+.+.+|||+.|++.++++++..+...+..||
T Consensus 121 ~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~ 200 (434)
T PRK11663 121 NAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRLRD 200 (434)
T ss_pred HHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999888877666555556677
Q ss_pred CCCCCCCCChHHHH-HHHhCCcc-ccccCCCcc-H-HHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccch
Q 019567 162 DPCNSPFVSKSELR-LIQAGKSD-SVKKRNPPS-L-RHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQ 237 (339)
Q Consensus 162 ~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~ 237 (339)
+|++.+..+.++.+ ..++..++ ++++.+..+ + +..+++|.++...+..++....+....+|+|.|+++.+|++..+
T Consensus 201 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ 280 (434)
T PRK11663 201 KPQAMGLPSVGEWRHDALELAQQQEGAGLSRKEILTKYVLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVT 280 (434)
T ss_pred CHhhcCCCCcccccccccccchhccccCCChhhhHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHH
Confidence 66543211110000 00000000 000011111 2 23667888998888878777788888899999998878999999
Q ss_pred hhHhhHHhHHHHHHHHhhhhhhhHHHHHh
Q 019567 238 AAWFSAVPWGTMAVSGYMAGKASDSLIKA 266 (339)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~g~l~d~~~~~ 266 (339)
++...+...+++.+++++.|+++||+.++
T Consensus 281 a~~~~~~~~~~~~~g~~~~g~l~dr~~~~ 309 (434)
T PRK11663 281 ANSAVSMFELGGFIGALVAGWGSDKLFNG 309 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHhccC
Confidence 99999999999999999999999998543
No 12
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=3e-34 Score=255.24 Aligned_cols=242 Identities=14% Similarity=0.182 Sum_probs=204.6
Q ss_pred CCcchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHH
Q 019567 1 MSVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRA 80 (339)
Q Consensus 1 ~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 80 (339)
+++++|.+++|+|+|.++.++..+.+.+++.+++++.|+++||+|||+++..+..+++++.+.+ ++++|++.++++|+
T Consensus 28 ~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~--~~a~~~~~ll~~r~ 105 (393)
T PRK09705 28 VGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMR--ELYPQSALLLSSAL 105 (393)
T ss_pred cchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHH--HHCcchHHHHHHHH
Confidence 3678999999999999999999999999999999999999999999999999999999999999 55899999999999
Q ss_pred HHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhc-cchHHHHHHHHHHHHHHHHHHhhc
Q 019567 81 FFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTI-GISGPFILFSSLGLLWLSTWTSKV 159 (339)
Q Consensus 81 l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~-~w~~~f~~~~~~~~~~~~~~~~~~ 159 (339)
++|++.+...+....++.|++| ++|+++++.+..+...|..+++.+++++.++. +||+.+...++..++.....+...
T Consensus 106 l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 184 (393)
T PRK09705 106 LGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALFAWWWQS 184 (393)
T ss_pred HHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999997 88999999999999999999999999988875 899998876665544333333222
Q ss_pred cCCCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccchhh
Q 019567 160 TNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAA 239 (339)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~ 239 (339)
+++|++++ +++ .+.++.+++|+.+...+..++....++...+|+|.|+++ +|.++.+++
T Consensus 185 ~~~~~~~~-----------------~~~---~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag 243 (393)
T PRK09705 185 AREVASSH-----------------KTT---TTPVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSG 243 (393)
T ss_pred cCCCcccc-----------------CCC---cCCcccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhh
Confidence 22221110 000 112345567888877777777778888889999999988 799999999
Q ss_pred HhhHHhHHHHHHHHhhhhhhhHHHHHh
Q 019567 240 WFSAVPWGTMAVSGYMAGKASDSLIKA 266 (339)
Q Consensus 240 ~~~~~~~~~~~~~~~~~g~l~d~~~~~ 266 (339)
...+...++.++++++.+++.||.++|
T Consensus 244 ~~~~~~~i~~i~g~~~~g~l~~r~~~~ 270 (393)
T PRK09705 244 SLLALMTLGQAAGALLMPAMARHQDRR 270 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccch
Confidence 999999999999999999999998865
No 13
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=100.00 E-value=5.2e-34 Score=251.82 Aligned_cols=322 Identities=20% Similarity=0.245 Sum_probs=237.0
Q ss_pred Ccchhh-hHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhc-chhHHHHHH
Q 019567 2 SVAVVP-LAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATH-STASLLAVR 79 (339)
Q Consensus 2 ~~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~r 79 (339)
++..|. +++++|+|+.+.+++.+.+.+++.+++++.|+++||+|||+.+.++.++..++.+++ ..++ +++.+++.|
T Consensus 21 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~ 98 (366)
T TIGR00886 21 SPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWA--GLAVQSYSVLLLLR 98 (366)
T ss_pred HHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHH--HHHhhhHHHHHHHH
Confidence 567785 999999999999999999999999999999999999999999999999999999998 5578 999999999
Q ss_pred HHHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhh----------hccchHHH-HHHHHHH
Q 019567 80 AFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLS----------TIGISGPF-ILFSSLG 148 (339)
Q Consensus 80 ~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~----------~~~w~~~f-~~~~~~~ 148 (339)
+++|++.+ ..+....++.|++|+|+|++++++.....++|..+++.+++.+.+ +.+||+.| +..++..
T Consensus 99 ~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 177 (366)
T TIGR00886 99 LFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGIL 177 (366)
T ss_pred HHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHH
Confidence 99999965 456788999999999999999999998888888888888776654 34899999 4445555
Q ss_pred HHHHHHHHhhccCCCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhh
Q 019567 149 LLWLSTWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFN 228 (339)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 228 (339)
.+..++.+...+|+|+++++.++.+.+ +...+.+++...+.++.+++|+++...+..++.....+....+.|.|++
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (366)
T TIGR00886 178 LLPALLIFFVGADTPPGKPATGKLSFK----GARWSVGTGALGDQLKVFRDRHTWILALLYSVTFGSFLGVSSIFAMFFK 253 (366)
T ss_pred HHHHHHHHHhcccCCcccccchhcccc----cccccccchhHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555555555556655432211110000 0000011111124667888999988888877777777888899999999
Q ss_pred hhhCCccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhccc--chhHHHHHHH
Q 019567 229 TVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAK--SPAVAAVLIT 306 (339)
Q Consensus 229 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 306 (339)
+.+|+++.+++.+.....+.+++++++.|++.||+++| +...............+.+...+ +.+.......
T Consensus 254 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (366)
T TIGR00886 254 DQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGA-------RKLLMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFV 326 (366)
T ss_pred HHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccc-------hhHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHH
Confidence 98899999999888888999999999999999999876 22332222222222222222222 3333333344
Q ss_pred HHHHHhhhcccchhhhhh-hcccchhhhhhhh
Q 019567 307 IALSLSSFSQAGYLLNIQ-IAQDFSTALQIQQ 337 (339)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~-~~p~~~g~~~g~q 337 (339)
......+...+....... ..|+++|+++|..
T Consensus 327 ~~~~~~g~~~~~~~~~~~~~~~~~~g~~~g~~ 358 (366)
T TIGR00886 327 ALFFFSGAGNGSTFALVPHIFRRATGAVSGLV 358 (366)
T ss_pred HHHHHhccccchhhhcchhhchhhcccHHHHH
Confidence 444555666666666666 7889999988864
No 14
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=100.00 E-value=4.3e-34 Score=261.71 Aligned_cols=326 Identities=15% Similarity=0.126 Sum_probs=248.9
Q ss_pred CcchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHH
Q 019567 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (339)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l 81 (339)
++.+|.+.+|+|.|+++.+++.+.+.++..++.++.|+++||+|||+++..+.++..++.+++ +.++|++.+++.|++
T Consensus 22 ~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~ 99 (485)
T TIGR00711 22 NVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLC--GVAPNLELMIIFRVI 99 (485)
T ss_pred HHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHH--hCcCCHHHHHHHHHH
Confidence 456899999999999999999999999999999999999999999999999999999999999 558999999999999
Q ss_pred HHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhccC
Q 019567 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTN 161 (339)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~ 161 (339)
+|++.+...+...+++.|++|+++|+++++++..+..+|..++|.+++++.++.+||+.|++.++++++..+...+..||
T Consensus 100 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~ 179 (485)
T TIGR00711 100 QGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPR 179 (485)
T ss_pred HHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999888887776666666666
Q ss_pred CCCCCCCC-ChHHH-----------HHHHhCCcc-------------------------ccccCCCccHHHHhcchhHHH
Q 019567 162 DPCNSPFV-SKSEL-----------RLIQAGKSD-------------------------SVKKRNPPSLRHLLSKLPSWT 204 (339)
Q Consensus 162 ~~~~~~~~-~~~~~-----------~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~ 204 (339)
+++++++. +.... ....+.+++ +.+++++....+++++|+++.
T Consensus 180 ~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (485)
T TIGR00711 180 DKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWELTDDNPLVDLRLFKYRNFTI 259 (485)
T ss_pred ccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCCCCccCHHHHcCCChHH
Confidence 54432221 11100 000000000 001111222346788999988
Q ss_pred HHHHHHhhHHHHHHHHHhhhhhhhhhhCCccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhh
Q 019567 205 VIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIG 284 (339)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 284 (339)
..+..++....++....++|.|+++.+|+++.+++.......++.+++.++.|++.||+++| +....+..+
T Consensus 260 ~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~---------~~~~~g~~~ 330 (485)
T TIGR00711 260 GCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPR---------KLVTIGLIL 330 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcH---------HHHHHHHHH
Confidence 88888888888888889999999998999999999999999999999999999999999875 445556656
Q ss_pred hhhHhhhhhc--cc--chhHHHHHHHHHHHHhhhcccchhhhh-h-hcccchhhhhhhhc
Q 019567 285 PGVSLLCLNY--AK--SPAVAAVLITIALSLSSFSQAGYLLNI-Q-IAQDFSTALQIQQE 338 (339)
Q Consensus 285 ~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~p~~~g~~~g~q~ 338 (339)
.+++..++.. .+ +.+.......+.....+.......... . ..++++|..+|..+
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 390 (485)
T TIGR00711 331 YAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSN 390 (485)
T ss_pred HHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHH
Confidence 5555555442 22 222222222222333333333333333 3 66688888887653
No 15
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00 E-value=3.4e-33 Score=248.32 Aligned_cols=302 Identities=17% Similarity=0.150 Sum_probs=226.4
Q ss_pred cchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHH
Q 019567 3 VAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFF 82 (339)
Q Consensus 3 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~ 82 (339)
+.+|++.+|+|.|+++.++..+.+.++..+++++.|+++||+|||+.+..+.++.+++.+++ ..++|++.+++.|+++
T Consensus 41 ~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~r~l~ 118 (394)
T PRK10213 41 SLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLV--SFANSFSLLLIGRACL 118 (394)
T ss_pred hhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHH--HHHChHHHHHHHHHHH
Confidence 35789999999999999999999999999999999999999999999999999999999998 5589999999999999
Q ss_pred HhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhccCC
Q 019567 83 GLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTND 162 (339)
Q Consensus 83 G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~ 162 (339)
|++.+...+...+++.|++|+|+|++++++...+.++|..++|++++.+.+.+|||+.|++.++++++..+......||+
T Consensus 119 G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~ 198 (394)
T PRK10213 119 GLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSL 198 (394)
T ss_pred HHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999998877766555444445554
Q ss_pred CCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccchhhHhh
Q 019567 163 PCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFS 242 (339)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~ 242 (339)
+++++ +...+.++.+|+|+++...+..++.....+...++.++++.+++|+++.+.+...
T Consensus 199 ~~~~~--------------------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~ 258 (394)
T PRK10213 199 PGEPS--------------------HQKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVL 258 (394)
T ss_pred Ccccc--------------------cchhHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHH
Confidence 32110 0011345778899988877666666666666667764444455799999999988
Q ss_pred HHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhcccchhHHHHHHHHHHHHhhhcccchhhh
Q 019567 243 AVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLN 322 (339)
Q Consensus 243 ~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (339)
...+++.++++++.+++.||.++ +.......+.......+....++.+.......+.+...+...+.....
T Consensus 259 ~~~~~~~iig~~~~~~l~~r~~~---------~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~ 329 (394)
T PRK10213 259 LSFGIASFVGTSLSSFILKRSVK---------LALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGLTFALVPVGWSTW 329 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhccch---------hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 88888999999999999998432 233333333233333333333344333333333333333444444444
Q ss_pred hh-hcccchhhhhh
Q 019567 323 IQ-IAQDFSTALQI 335 (339)
Q Consensus 323 ~~-~~p~~~g~~~g 335 (339)
.+ ..|++.+...+
T Consensus 330 ~~~~~~~~~~~~~~ 343 (394)
T PRK10213 330 ITRSLADQAEKAGS 343 (394)
T ss_pred HHHHCcccHHHHHH
Confidence 45 55655544433
No 16
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=100.00 E-value=1.3e-33 Score=249.89 Aligned_cols=310 Identities=18% Similarity=0.194 Sum_probs=235.3
Q ss_pred CcchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHH
Q 019567 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (339)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l 81 (339)
++..|.+++|+|+|+++.+++.+.+.+++.+++++.|+++||+|||+++..+.++.+++.+++ +.++|++.+++.|++
T Consensus 23 ~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 100 (377)
T TIGR00890 23 TLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFY--AIADSLAALYLTYGL 100 (377)
T ss_pred hhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHH--HHHHHHHHHHHHHHH
Confidence 578899999999999999999999999999999999999999999999999999999999998 568999999999999
Q ss_pred HHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhccC
Q 019567 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTN 161 (339)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~ 161 (339)
.|++.+...+.....+.|++| |+|+++.++...+.++|..+++++.+.+.+..+||+.|++.++++++..+..++..++
T Consensus 101 ~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 179 (377)
T TIGR00890 101 ASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAFLIGY 179 (377)
T ss_pred HhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHheec
Confidence 999999888888889999996 6799999999999999998888787777788899999999998888877776666655
Q ss_pred CCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccchhhHh
Q 019567 162 DPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWF 241 (339)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~ 241 (339)
++++++++++ +.+++..+.++.+++|+++...+..++..........+.+.|.++ +|.+..+.+..
T Consensus 180 ~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 245 (377)
T TIGR00890 180 PPGQLIKTNI-------------EVSVKDYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQS-LGLSDGFLVLA 245 (377)
T ss_pred CchhccccCc-------------ccchhhhhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHHH-cCCCHHHHHHH
Confidence 4432211100 001111245678888888887777776666666666777777666 68888888988
Q ss_pred hHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhcccchh--HHHHHHHHHHHHhhhcccch
Q 019567 242 SAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPA--VAAVLITIALSLSSFSQAGY 319 (339)
Q Consensus 242 ~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 319 (339)
.....++.++++++.|++.||++|| ..+..+..+..++..+....++.. .............+...+..
T Consensus 246 ~~~~~~~~~~~~~~~g~l~dr~g~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 316 (377)
T TIGR00890 246 VSISSIFNGGGRPFLGALSDKIGRQ---------KTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISLF 316 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhh---------hhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchhcc
Confidence 9999999999999999999999876 344455555555555554444321 11111222222233333333
Q ss_pred hhhhh--hcccchhhhhhhh
Q 019567 320 LLNIQ--IAQDFSTALQIQQ 337 (339)
Q Consensus 320 ~~~~~--~~p~~~g~~~g~q 337 (339)
..... ..++++|+..|..
T Consensus 317 ~~~~~~~~~~~~~~~~~g~~ 336 (377)
T TIGR00890 317 PSLVSDIFGPANSAANYGFL 336 (377)
T ss_pred HHHHHHHhhhhhhhhHhHHH
Confidence 33333 5567788877754
No 17
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=100.00 E-value=1.5e-34 Score=253.70 Aligned_cols=320 Identities=24% Similarity=0.348 Sum_probs=238.6
Q ss_pred cchh-hhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHH
Q 019567 3 VAVV-PLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (339)
Q Consensus 3 ~~~~-~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l 81 (339)
+..| .+.+|+|.|+++.+++.+.+.++..+++++.|+++||+|||+++..+.++.+++..+. .+++|.+.+++.|++
T Consensus 17 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l 94 (352)
T PF07690_consen 17 PALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLL--AFASNFWLLLIARFL 94 (352)
T ss_dssp HHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHH--HHHCCHHHHHHHHHH
T ss_pred HHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHh--hhhhhHHHHhhhccc
Confidence 4567 8899999999999999999999999999999999999999999999999999996666 345888899999999
Q ss_pred HHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhccC
Q 019567 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTN 161 (339)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~ 161 (339)
.|++.+...+...+++.|++|+|+|++++++.+...++|..++|.+++.+.+..+||+.|++.+++.++..++.....++
T Consensus 95 ~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~ 174 (352)
T PF07690_consen 95 LGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLPE 174 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC--
T ss_pred cccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999988877755455555
Q ss_pred CCCCCCCCChHHHHHHHhCCccccccCCCc-cHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCc-cchhh
Q 019567 162 DPCNSPFVSKSELRLIQAGKSDSVKKRNPP-SLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVN-LKQAA 239 (339)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~-~~~~~ 239 (339)
++++++..++++++ ++++++.. .++.+.++|.+|......++..........+.|.|+++.+|.+ ..+.+
T Consensus 175 ~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 246 (352)
T PF07690_consen 175 PPPPRERESPKESE--------SKKPKPLKPGFKSLFKNPVLWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAG 246 (352)
T ss_dssp -STTTT--SSTTTT----------HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHH
T ss_pred cccccccccccccc--------cccccccccccccccccchhhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHH
Confidence 55443332222210 01111222 3677778887775556666666677778999999988889999 78999
Q ss_pred HhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhcccchhHHHHHHHHHHHHhhhcccch
Q 019567 240 WFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGY 319 (339)
Q Consensus 240 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (339)
.......+.+++++++.+++.||+++++ +.........+...........++.........+.....+...+..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 320 (352)
T PF07690_consen 247 LLFSIFGIVGIIGSLLAGRLSDRFGRRR------RLLIAILLLILGALGLLLLPFSSSPVWLIIALFLIGFGFGIVFPIL 320 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCHH------HHHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCcHH------HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999999999987641 1122222222222222222222233333333333344555556666
Q ss_pred hhhhh--hcccchhhhhhhhc
Q 019567 320 LLNIQ--IAQDFSTALQIQQE 338 (339)
Q Consensus 320 ~~~~~--~~p~~~g~~~g~q~ 338 (339)
..... ..|+++|++.|..+
T Consensus 321 ~~~~~~~~~~~~~g~~~g~~~ 341 (352)
T PF07690_consen 321 FSLIQELVPPEYRGTAFGLFN 341 (352)
T ss_dssp HHHHHCCCHTCHHHHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHHH
Confidence 66666 55588998887653
No 18
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=100.00 E-value=2.3e-33 Score=255.03 Aligned_cols=323 Identities=18% Similarity=0.119 Sum_probs=234.9
Q ss_pred CcchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHH
Q 019567 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (339)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l 81 (339)
++..|.+++|+|+|.++.+++.+.+.+++.+++++.|+++||+|||+++..+.++++++.+++ +.++|++.+++.|++
T Consensus 56 ~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~--~~~~s~~~l~~~r~l 133 (476)
T PLN00028 56 APLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCM--SLVSSATGFIAVRFF 133 (476)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH--HHhcCHHHHHHHHHH
Confidence 456889999999999999999999999999999999999999999999999999999999888 558899999999999
Q ss_pred HHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhh---------hccchHHHHHHHHHHHHHH
Q 019567 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLS---------TIGISGPFILFSSLGLLWL 152 (339)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~---------~~~w~~~f~~~~~~~~~~~ 152 (339)
+|++.+.. .....+++|++|+++|++++++.....++|..+++.+.+.+.. ..|||+.|++.++++++..
T Consensus 134 ~G~~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~ 212 (476)
T PLN00028 134 IGFSLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMG 212 (476)
T ss_pred HHHHHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHH
Confidence 99998764 4466789999999999999999988777787777666654432 2589999999999888777
Q ss_pred HHHHhhccCCCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhC
Q 019567 153 STWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFN 232 (339)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g 232 (339)
+..++..++.|++. . ++.+ ++. +.+++.....+++.++++++|...+..++.....+...+++|.|+.+++|
T Consensus 213 l~~~~~~~~~p~~~-~---~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g 284 (476)
T PLN00028 213 ILVLTLGQDLPDGN-Y---RELK---KSG-TMPKDSFSKVLRYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFYDRFG 284 (476)
T ss_pred HHHHHHcCcCCCCc-h---hhHH---hcC-ccccccHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcC
Confidence 66665554444321 1 1100 000 00111111245677888998888777776666667778899999988889
Q ss_pred CccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhcccchhHHHHHHHHHHHHh
Q 019567 233 VNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLS 312 (339)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (339)
++..+++.+.....+++++++++.|+++||+++|.... .|+........+.++...++...++.+......++.....
T Consensus 285 ~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~--~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~~~ 362 (476)
T PLN00028 285 LSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMR--GRLWALWIVQTLGGVFCIWLGRANSLGAAIVVMILFSIFV 362 (476)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcc--hhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998763211 1344444444444444444444444333333333333333
Q ss_pred hhcccchhhhhh-hcccchhhhhhhh
Q 019567 313 SFSQAGYLLNIQ-IAQDFSTALQIQQ 337 (339)
Q Consensus 313 ~~~~~~~~~~~~-~~p~~~g~~~g~q 337 (339)
....+....... +.|+++|...|..
T Consensus 363 ~~~~~~~~~~~~~~~~~~~g~~~g~~ 388 (476)
T PLN00028 363 QAACGATFGIVPFVSRRSLGVISGLT 388 (476)
T ss_pred HHhhhhhcccCcccChhhchhhhhhh
Confidence 333344444445 7788888887764
No 19
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=100.00 E-value=3.7e-33 Score=248.03 Aligned_cols=248 Identities=19% Similarity=0.246 Sum_probs=216.3
Q ss_pred CcchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHH
Q 019567 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (339)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l 81 (339)
.+..|.+++|+|.|+++.+++.+.+.++..+++++.|+++||+|||+++..+.++..++.+.+ ..+++++.+++.|++
T Consensus 25 ~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l 102 (385)
T TIGR00710 25 LPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGL--ALSNNIETLLVLRFV 102 (385)
T ss_pred cccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHH--HHHccHHHHHHHHHH
Confidence 467899999999999999999999999999999999999999999999999999999999988 558999999999999
Q ss_pred HHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhccC
Q 019567 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTN 161 (339)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~ 161 (339)
.|++.+...+...+++.|++|+++|++++++.+....+|..++|.+++.+.++.+||+.|++.++..++..+..+...||
T Consensus 103 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (385)
T TIGR00710 103 QAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPE 182 (385)
T ss_pred HHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999888877776666666666
Q ss_pred CCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccchhhHh
Q 019567 162 DPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWF 241 (339)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~ 241 (339)
+++++++.+++ +...++++.+++|+++...+...+.....+....+.|.++++.+|.++.+.+.+
T Consensus 183 ~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 247 (385)
T TIGR00710 183 TLPYEARIQIS---------------TYFETFLLLLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLL 247 (385)
T ss_pred CCCCcccCCHH---------------HHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHH
Confidence 55433221111 011245678889998888777777777777888889999988889999999999
Q ss_pred hHHhHHHHHHHHhhhhhhhHHHHHh
Q 019567 242 SAVPWGTMAVSGYMAGKASDSLIKA 266 (339)
Q Consensus 242 ~~~~~~~~~~~~~~~g~l~d~~~~~ 266 (339)
.....++.++++++.+++.||+++|
T Consensus 248 ~~~~~~~~~~~~~~~g~l~~~~~~~ 272 (385)
T TIGR00710 248 FALNIIAMIFGGFLNGRFIKKWGAK 272 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHH
Confidence 9999999999999999999999876
No 20
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=100.00 E-value=4.6e-34 Score=253.04 Aligned_cols=263 Identities=18% Similarity=0.242 Sum_probs=218.3
Q ss_pred CcchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHH
Q 019567 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (339)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l 81 (339)
++..|.+++++|.|+++.+++.+.+.++..+++++.|+++||+|||+++..+.++..++.+++ ..+++++.+++.|++
T Consensus 15 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 92 (379)
T TIGR00881 15 ALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFF--GFSTSLWVMAALWAL 92 (379)
T ss_pred hhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHH--HHhhhHHHHHHHHHH
Confidence 567899999999999999999999999999999999999999999999999999999999998 558999999999999
Q ss_pred HHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHH-hHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhcc
Q 019567 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGL-LLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVT 160 (339)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~-~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~ 160 (339)
.|++.+...+...+++.|++|+++|++++++.+.+..+|..++| .++..+.+..+||+.|++.+++.++..+..+...|
T Consensus 93 ~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (379)
T TIGR00881 93 NGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFLLLR 172 (379)
T ss_pred HHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHheeeC
Confidence 99999999999999999999999999999999999999999999 57777778889999999988888777777776777
Q ss_pred CCCCCCCCCChHHHH--HHHhCC--ccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccc
Q 019567 161 NDPCNSPFVSKSELR--LIQAGK--SDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLK 236 (339)
Q Consensus 161 ~~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~ 236 (339)
|++++++..++++.. ..+..+ ++++.+..+...++++++|.++...+..++..........+.|.|+++.+|+++.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 252 (379)
T TIGR00881 173 DSPQSCGLPPAEEMPNEEPDGDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKE 252 (379)
T ss_pred CCccccccCccccCcccccccccccccccccchHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 766543221111110 000000 0011111223456778899999888888888888888899999999998899999
Q ss_pred hhhHhhHHhHHHHHHHHhhhhhhhHHHHHh
Q 019567 237 QAAWFSAVPWGTMAVSGYMAGKASDSLIKA 266 (339)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~ 266 (339)
+.+.......++.++++++.+++.||..++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~ 282 (379)
T TIGR00881 253 KASWAFTLYELGGLVGTLLAGWLSDKLFNG 282 (379)
T ss_pred HHHHHHHHHHHHcchhHHHHHHHHHHHcCC
Confidence 999999999999999999999999987544
No 21
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=100.00 E-value=3.8e-33 Score=245.98 Aligned_cols=315 Identities=15% Similarity=0.103 Sum_probs=238.3
Q ss_pred cchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhc-----chhHHHH
Q 019567 3 VAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATH-----STASLLA 77 (339)
Q Consensus 3 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 77 (339)
+.+|.+.+|++.++.+.+++.+.+.++..+++++.|+++||+|||+++..+.++..++.++.++ .+ |++.+++
T Consensus 20 ~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 97 (365)
T TIGR00900 20 VALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPF--VALLGGLNIWQVYV 97 (365)
T ss_pred HHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHH--HHHcCCCcHHHHHH
Confidence 4578888999999999999999999999999999999999999999999999998888887743 55 9999999
Q ss_pred HHHHHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHh
Q 019567 78 VRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTS 157 (339)
Q Consensus 78 ~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~ 157 (339)
.|+++|++.+...+...+++.|++|+++|++++++.+.+..+|..++|.+++.+.+..|||+.|++.++..++..+..+.
T Consensus 98 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 177 (365)
T TIGR00900 98 LAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVS 177 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999887766655444433
Q ss_pred hccCCCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHH-HhhhhhhhhhhCCccc
Q 019567 158 KVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLL-SWMPIYFNTVFNVNLK 236 (339)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~g~~~~ 236 (339)
..++++++++..+.+++ ..++....+++++|+|.++...+..++......... .+.|.+.++.+|.++.
T Consensus 178 ~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (365)
T TIGR00900 178 VRIPELAASEIQALSNA----------VLRDTREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGST 247 (365)
T ss_pred cccccCCCccccccchh----------HHHHHHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchH
Confidence 32222221111110000 001112246778889999888877777777776666 8889998887899999
Q ss_pred hhhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhcccc-hhHHHHHHHHHHHHhhhc
Q 019567 237 QAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKS-PAVAAVLITIALSLSSFS 315 (339)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 315 (339)
+.+.......++.+++.++.+++.||.+++ .....+....+++.......++ .+...+..++.....+..
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 318 (365)
T TIGR00900 248 HYGWVLAAFGLGALLGALLLGLLGRYFKRM---------ALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGPI 318 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhchh---------HHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998765 4444555555555555554443 333333333333333444
Q ss_pred ccchhhhhh--hcccchhhhhhhhc
Q 019567 316 QAGYLLNIQ--IAQDFSTALQIQQE 338 (339)
Q Consensus 316 ~~~~~~~~~--~~p~~~g~~~g~q~ 338 (339)
.+....... ..|+++|...+..+
T Consensus 319 ~~~~~~~~~~~~~~~~~g~~~~~~~ 343 (365)
T TIGR00900 319 NVPQGTLLQRRVPAELLGRVFGAQF 343 (365)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 444444444 55678888887653
No 22
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=5.1e-33 Score=248.92 Aligned_cols=311 Identities=21% Similarity=0.196 Sum_probs=231.1
Q ss_pred CcchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHH
Q 019567 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (339)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l 81 (339)
++..|.+.+|+|.|+++.+++.+.+.++..+++++.|+++||+|||+++..+.++..++.+++ ..++|++.+++.|++
T Consensus 35 ~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l 112 (406)
T PRK11551 35 GVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLAT--AQAWDFPSLLVARLL 112 (406)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHH--HHhccHHHHHHHHHH
Confidence 456799999999999999999999999999999999999999999999999999999998888 558999999999999
Q ss_pred HHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhccC
Q 019567 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTN 161 (339)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~ 161 (339)
+|++.+...+...+++.|++|+|+|++++++.+.+..+|..+++.++..+.+..+||+.|++.++..++..+......||
T Consensus 113 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 192 (406)
T PRK11551 113 TGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPE 192 (406)
T ss_pred HHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999888888999999999887766666666666677
Q ss_pred CCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhc---chhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccchh
Q 019567 162 DPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLS---KLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQA 238 (339)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~ 238 (339)
++++.++.++++ + ++...++.++ +++.+......++.....+....|.|.++++ .|+++.+.
T Consensus 193 ~~~~~~~~~~~~-----------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~ 257 (406)
T PRK11551 193 SRAFAQAAGAGK-----------Q---RAPVLRALFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQA 257 (406)
T ss_pred ChhHHhccCcch-----------h---hhhhHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCChhhh
Confidence 654322111000 0 0001112222 2233334444455555666777889999988 69999999
Q ss_pred hHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhcccchhHHHHHHHHHHHHhhhcccc
Q 019567 239 AWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAG 318 (339)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (339)
+.......++.++++++.|++.||+++| +....+.+...++...+...++.+.................+.
T Consensus 258 ~~~~~~~~~~~~~~~~~~g~l~dr~g~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 328 (406)
T PRK11551 258 GLVQIAFNIGGALGSLLIGALMDRLRPR---------RVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLFVVGGQSV 328 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhHH---------HHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhHHHH
Confidence 9999999999999999999999999875 3333444444455554444444433322222222222222233
Q ss_pred hhhhhh--hcccchhhhhhhhc
Q 019567 319 YLLNIQ--IAQDFSTALQIQQE 338 (339)
Q Consensus 319 ~~~~~~--~~p~~~g~~~g~q~ 338 (339)
...... ..++++|+..|..+
T Consensus 329 ~~~~~~~~~p~~~~g~~~g~~~ 350 (406)
T PRK11551 329 LYALAPLFYPTQVRGTGVGAAV 350 (406)
T ss_pred HHHHHHHHcchhhhhhhhhHHH
Confidence 333334 55577888877653
No 23
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=6.4e-33 Score=249.79 Aligned_cols=245 Identities=17% Similarity=0.187 Sum_probs=190.2
Q ss_pred CcchhhhHhHhC---CCccchhHHHHHH---HHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchh--
Q 019567 2 SVAVVPLAAKFG---WSSSFLGIVQSSF---LWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTA-- 73 (339)
Q Consensus 2 ~~~~~~i~~~~~---~s~~~~g~~~s~~---~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~-- 73 (339)
+...|.+.+|++ .+..+.+...+.+ .++..+++++.|+++||+|||+++..+.++++++++++ ++++|+.
T Consensus 42 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~--~~~~~~~~~ 119 (432)
T PRK10406 42 SFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVI--ACLPGYETI 119 (432)
T ss_pred HHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHH--hhcCCchhH
Confidence 456788999985 4555444444444 44445999999999999999999999999999999999 5577764
Q ss_pred ------HHHHHHHHHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhh--------hhccchH
Q 019567 74 ------SLLAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIML--------STIGISG 139 (339)
Q Consensus 74 ------~~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~--------~~~~w~~ 139 (339)
.+++.|+++|++.|..++...+++.|++|+|+|+++.++.+.+...|..+++.+...+. +.+|||+
T Consensus 120 ~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~ 199 (432)
T PRK10406 120 GTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRI 199 (432)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHH
Confidence 58899999999999999999999999999999999999999888888888887765543 2579999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHh-hHHHHHH
Q 019567 140 PFILFSSLGLLWLSTWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANIT-NNWGYFV 218 (339)
Q Consensus 140 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 218 (339)
+|++.+++.++.. ......||+++++ .+ + +++..++++++|+|+.+...+...+ ....++.
T Consensus 200 ~F~i~~~~~ll~~-~~~~~~~e~~~~~-------~~---------~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 261 (432)
T PRK10406 200 PFALGAVLAVVAL-WLRRQLDETSQQE-------TR---------A-LKEAGSLKGLWRNRRAFIMVLGFTAAGSLCFYT 261 (432)
T ss_pred HHHHHHHHHHHHH-HHHhcCCCCchHH-------Hh---------h-hcccccHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 9998777666543 2233344443211 00 0 0012357888899888776655544 3667788
Q ss_pred HHHhhhhhhhhhhCCccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHh
Q 019567 219 LLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKA 266 (339)
Q Consensus 219 ~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~ 266 (339)
..+|+|.|+++.+|++..+.+.......+...++.++.|+++||++||
T Consensus 262 ~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr 309 (432)
T PRK10406 262 FTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRR 309 (432)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch
Confidence 889999999888899988888888888888888899999999999876
No 24
>PRK10091 MFS transport protein AraJ; Provisional
Probab=100.00 E-value=1.5e-32 Score=243.69 Aligned_cols=260 Identities=17% Similarity=0.198 Sum_probs=214.5
Q ss_pred CcchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHH
Q 019567 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (339)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l 81 (339)
.+.+|.+++|+|.|.++.|+..+.+.+++.+++++.|+++||+|||+++..+..+.+++.+++ +.++|++.+++.|++
T Consensus 23 ~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~--~~~~~~~~l~~~r~l 100 (382)
T PRK10091 23 MGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMF--TLSSSYLMLAIGRLV 100 (382)
T ss_pred HhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHH--HHhCcHHHHHHHHHH
Confidence 467899999999999999999999999999999999999999999999999999999999999 558999999999999
Q ss_pred HHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhccC
Q 019567 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTN 161 (339)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~ 161 (339)
+|++.+...+....++.|++|+++|+++++....+..+|..++|++++.+.+..+||+.|++.++..++..+..+...||
T Consensus 101 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~ 180 (382)
T PRK10091 101 SGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVPD 180 (382)
T ss_pred HHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999988888899999999999999999999999999999999999999999999999999988877766655666676
Q ss_pred CCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccchhhHh
Q 019567 162 DPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWF 241 (339)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~ 241 (339)
.+++++. +. .+..+.+|+++.+......++.....+....+++.++++.+|+++.+.+.+
T Consensus 181 ~~~~~~~-~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~ 240 (382)
T PRK10091 181 IRDEAKG-GL-------------------REQFHFLRSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFI 240 (382)
T ss_pred CCccccc-CH-------------------HHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHH
Confidence 5432110 00 011245677777766655555555555566777888888789999999999
Q ss_pred hHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhh
Q 019567 242 SAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCL 292 (339)
Q Consensus 242 ~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (339)
.....++.++++++.+++.||++++ +....+..+.+++.+++
T Consensus 241 ~~~~~~~~~ig~~~~g~l~~r~~~~---------~~~~~~~~~~~i~~~~~ 282 (382)
T PRK10091 241 MMLVGLGMVLGNLLSGRLSGRYSPL---------RIAAVTDFIIVLALLML 282 (382)
T ss_pred HHHHHHHHHHHhHHHheeccccCch---------hHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999865 33344444445544433
No 25
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=100.00 E-value=4.3e-32 Score=240.56 Aligned_cols=250 Identities=15% Similarity=0.197 Sum_probs=214.9
Q ss_pred CcchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHH
Q 019567 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (339)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l 81 (339)
.|.+|.+.+|+|+|+++.++..+.+.++..+++++.|+++||+|||+++..+..+.+++...+ ..+++++.+++.|++
T Consensus 11 ~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~l 88 (377)
T PRK11102 11 LPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVAC--ALAQTIDQLIYMRFL 88 (377)
T ss_pred hccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHH--HHHccHHHHHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999998 558999999999999
Q ss_pred HHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhccC
Q 019567 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTN 161 (339)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~ 161 (339)
+|++.+...+...+++.|++|+++|++++++.+....+|..++|.+++.+.+..+||+.|++.+++.++..+...+..||
T Consensus 89 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (377)
T PRK11102 89 HGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFIPE 168 (377)
T ss_pred HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999888887776666666666
Q ss_pred CCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccchhhHh
Q 019567 162 DPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWF 241 (339)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~ 241 (339)
+++++++.+.+ .++...++++.+++|+++...+..++.....+....+.|.++.+.+|+++++.+..
T Consensus 169 ~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~ 235 (377)
T PRK11102 169 TLPKERRQPFH-------------LRTTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYY 235 (377)
T ss_pred cCcccccCCCC-------------hHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHH
Confidence 54332111100 00111245678888888877777766666777777888888888889999999999
Q ss_pred hHHhHHHHHHHHhhhhhhhHHHHHh
Q 019567 242 SAVPWGTMAVSGYMAGKASDSLIKA 266 (339)
Q Consensus 242 ~~~~~~~~~~~~~~~g~l~d~~~~~ 266 (339)
.....++.++++++.+++.||+++|
T Consensus 236 ~~~~~~~~~~~~~~~g~l~~r~g~~ 260 (377)
T PRK11102 236 FALNIVFLFVMTIINSRFVRRVGAL 260 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCHH
Confidence 9999999999999999999999876
No 26
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.8e-33 Score=235.37 Aligned_cols=308 Identities=19% Similarity=0.218 Sum_probs=256.5
Q ss_pred CcchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhh-cchhHHHHHHH
Q 019567 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAAT-HSTASLLAVRA 80 (339)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~r~ 80 (339)
+++.+.+.+|+|+|+.|.+++.+...+...+..++.|.+.||+|.|++..++.++..+.++..+++.. ++++.+++.++
T Consensus 34 s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gl 113 (417)
T COG2223 34 SPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLLVIGL 113 (417)
T ss_pred HHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHH
Confidence 56778899999999999999999999999999999999999999999999999999999999855321 33459999999
Q ss_pred HHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhcc---chHHHHHHHHHHHHHHHHHHh
Q 019567 81 FFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIG---ISGPFILFSSLGLLWLSTWTS 157 (339)
Q Consensus 81 l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~---w~~~f~~~~~~~~~~~~~~~~ 157 (339)
+.|++ |..+......+++|||+|++|.++|++. ..++|..+...++..+....+ ||..-.+..+..++..+..++
T Consensus 114 l~G~~-GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~ 191 (417)
T COG2223 114 LLGLA-GASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWL 191 (417)
T ss_pred HHhcc-cceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998 6678999999999999999999999999 899999999999999999999 999999988888888888888
Q ss_pred hccCCCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccch
Q 019567 158 KVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQ 237 (339)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~ 237 (339)
..+|.|+.++..++. .+..++.+.++|+.|.+.+.++....++.++..++|.|+++++|.++.+
T Consensus 192 ~~~d~p~~r~~~~~~----------------~~~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~ 255 (417)
T COG2223 192 GMNDVPEHRASVKPQ----------------LPAQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVT 255 (417)
T ss_pred HhCCChhhhcccccc----------------chhHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhh
Confidence 888877642211110 0135678889999999999999999999999999999999999999999
Q ss_pred hhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhcc-------cchhHHHHHHHHHHH
Q 019567 238 AAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYA-------KSPAVAAVLITIALS 310 (339)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~ 310 (339)
++.+.....+.+.+.++++|+++||+|.+ +.+...+..++++....... .+........+....
T Consensus 256 Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~---------rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~ 326 (417)
T COG2223 256 AGLIAFLFPLIGALARPLGGWLSDRIGGR---------RVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFV 326 (417)
T ss_pred HHHHHHHHHHHHHHHHhccchhhhhccch---------hHHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHH
Confidence 99999999999999999999999999986 33334444444444444333 334445555566667
Q ss_pred Hhhhcccchhhhhh-hcccchhhhhhh
Q 019567 311 LSSFSQAGYLLNIQ-IAQDFSTALQIQ 336 (339)
Q Consensus 311 ~~~~~~~~~~~~~~-~~p~~~g~~~g~ 336 (339)
+.+......+-... +.|++.|.+.|.
T Consensus 327 ~~G~GnGsvfk~Ip~if~~~~G~v~G~ 353 (417)
T COG2223 327 FAGLGNGSVFKMIPVIFPKETGAVTGI 353 (417)
T ss_pred HhccCcchheeechHHHHhhhhHHHHH
Confidence 77888888887777 888888888775
No 27
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=100.00 E-value=9.2e-32 Score=240.70 Aligned_cols=311 Identities=12% Similarity=0.107 Sum_probs=235.6
Q ss_pred CcchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHH
Q 019567 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (339)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l 81 (339)
.+.+|.+.+|+|.|+.+.++..+.+.+++.+++++.|+++||+|||+++..+..+..++.+.+ ..+++++.+++.|++
T Consensus 33 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~--~~~~~~~~l~~~~~l 110 (406)
T PRK15402 33 QPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAI--LLAQSIEQFTLLRFL 110 (406)
T ss_pred hcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH--HHHccHHHHHHHHHH
Confidence 356788999999999999999999999999999999999999999999999999999999988 558999999999999
Q ss_pred HHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhccC
Q 019567 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTN 161 (339)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~ 161 (339)
+|++.+...+...+.+.|++|+++|.+.+++......+|..++|.+++.+.++.+||+.|++.++..++..+..+...||
T Consensus 111 ~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 190 (406)
T PRK15402 111 QGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPE 190 (406)
T ss_pred HHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999988889999999999999999999999888899999999999999998999999999888887766666556666
Q ss_pred CCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccchhhHh
Q 019567 162 DPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWF 241 (339)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~ 241 (339)
++++.+++.+ .++...++++++++|+++...+..++..........+.|.++++.+|+++.+.+..
T Consensus 191 ~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~ 256 (406)
T PRK15402 191 TAGRVGEKLS--------------LKELGRDYKLVLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLL 256 (406)
T ss_pred CCcccccccc--------------HHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHH
Confidence 5433211100 00111245778899999888777777766666777788999888889999888888
Q ss_pred hHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhcc-----cchhHHHHHHHHHHHHhhhcc
Q 019567 242 SAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYA-----KSPAVAAVLITIALSLSSFSQ 316 (339)
Q Consensus 242 ~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 316 (339)
.....++.++++++.+++.||+++| .....+.+...++..++... .+.+.......+.....+...
T Consensus 257 ~~~~~~~~~~g~~~~g~l~~r~~~~---------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~ 327 (406)
T PRK15402 257 QVPVFGALIAGNLTLARLTSRRPLR---------SLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLAN 327 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHH---------HHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHh
Confidence 7777778889999999999999865 33344444444443333221 122222222222222233333
Q ss_pred cchhhhhh-hcccchhhhhhhh
Q 019567 317 AGYLLNIQ-IAQDFSTALQIQQ 337 (339)
Q Consensus 317 ~~~~~~~~-~~p~~~g~~~g~q 337 (339)
+....... ..|+++|++++..
T Consensus 328 ~~~~~~~~~~~~~~~g~~~~~~ 349 (406)
T PRK15402 328 AGLYRLTLFSSDVSKGTVSAAM 349 (406)
T ss_pred hhHHHHHhhhccccccHHHHHH
Confidence 33333334 5567888877653
No 28
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=100.00 E-value=8.2e-32 Score=240.81 Aligned_cols=245 Identities=14% Similarity=0.141 Sum_probs=207.5
Q ss_pred CcchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHH
Q 019567 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (339)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l 81 (339)
.|.+|.+.+|++.|.++.++..+++.+++.+++++.|+++||+|||+++..+.++++++++++ ..++|++.++++|++
T Consensus 36 ~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~--~~a~~~~~l~~~r~l 113 (413)
T PRK15403 36 QPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAAT--LFTTSMTQFLIARFI 113 (413)
T ss_pred ccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHH--HHcCCHHHHHHHHHH
Confidence 578899999999999999999999999999999999999999999999999999999999999 558999999999999
Q ss_pred HHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhccC
Q 019567 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTN 161 (339)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~ 161 (339)
+|++.+...+....++.|++|+++|++++++......+|..++|.+++.+.++.|||+.|++.++..++..+..++..||
T Consensus 114 ~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~ 193 (413)
T PRK15403 114 QGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPE 193 (413)
T ss_pred HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99998877777788899999999999999999999999999999999999998999999999988877766655556677
Q ss_pred CCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccchhhHh
Q 019567 162 DPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWF 241 (339)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~ 241 (339)
+++++++..+ .+...+++++++|||+++...+..++.....+.+..+.|.++++.+|.++.+.++.
T Consensus 194 ~~~~~~~~~~--------------~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~ 259 (413)
T PRK15403 194 TVKRGAVPFS--------------AKSVLRDFRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWT 259 (413)
T ss_pred CccccCCCCC--------------hHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHH
Confidence 6542211100 00111256788999999998888888888888888899999999889999999998
Q ss_pred hHHhHHHHHHHHhhhhhhhHH
Q 019567 242 SAVPWGTMAVSGYMAGKASDS 262 (339)
Q Consensus 242 ~~~~~~~~~~~~~~~g~l~d~ 262 (339)
......+..++..+.+++.+|
T Consensus 260 ~~~~~~~~~i~~~l~~~~~~~ 280 (413)
T PRK15403 260 QVPVFGAVIVANAIVARFVKD 280 (413)
T ss_pred HHHHHHHHHHHHHHHHHHhcc
Confidence 877777777777776665543
No 29
>PRK03699 putative transporter; Provisional
Probab=100.00 E-value=6.2e-32 Score=240.71 Aligned_cols=244 Identities=16% Similarity=0.171 Sum_probs=201.7
Q ss_pred CcchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHH
Q 019567 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (339)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l 81 (339)
++.+|++++|+|+|+++.++..+.+.+++.+++++.|++.||+|||+++..+.++.+++.+++ ..++|++.+++.|++
T Consensus 27 g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~--~~~~~~~~~~~~~~l 104 (394)
T PRK03699 27 GMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGL--MFSHSLALFSIAMFV 104 (394)
T ss_pred hhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH--HHcchHHHHHHHHHH
Confidence 567899999999999999999999999999999999999999999999999999999999998 558999999999999
Q ss_pred HHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhh-hccchHHHHHHHHHHHHHHHHHHhhcc
Q 019567 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLS-TIGISGPFILFSSLGLLWLSTWTSKVT 160 (339)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~-~~~w~~~f~~~~~~~~~~~~~~~~~~~ 160 (339)
+|++.+...+....++.|++|+++|+++++..+....+|..++|.+.+.+.+ ..+||+.|.+.+++.++..++.+. +
T Consensus 105 ~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~~~--~ 182 (394)
T PRK03699 105 LGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILTLF--S 182 (394)
T ss_pred HHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHh--c
Confidence 9999999889999999999999999999999999999999999999887754 579999999988877665544432 2
Q ss_pred CCCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccchhhH
Q 019567 161 NDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAW 240 (339)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~ 240 (339)
+.|+.+++.+++ +++. .++ ..+++++...+..++....++....|+|.|+++++|+|+.+.+.
T Consensus 183 ~~p~~~~~~~~~------------~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~ 245 (394)
T PRK03699 183 EFPALGKHAPKA------------DKPV----AKE-KWGIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGN 245 (394)
T ss_pred CCccccccCccc------------cCcc----ccc-cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhH
Confidence 222211110000 0000 011 12456677777777777778888899999999888999999999
Q ss_pred hhHHhHHHHHHHHhhhhhhhHHHHHh
Q 019567 241 FSAVPWGTMAVSGYMAGKASDSLIKA 266 (339)
Q Consensus 241 ~~~~~~~~~~~~~~~~g~l~d~~~~~ 266 (339)
+.+...++..+++++.++++||+++|
T Consensus 246 ~~~~~~~~~~ig~~~~g~l~dr~~~~ 271 (394)
T PRK03699 246 LVSNFWMAYMVGMWIFSFIVRFFDLQ 271 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhchh
Confidence 99999999999999999999999876
No 30
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=2.8e-32 Score=243.92 Aligned_cols=324 Identities=13% Similarity=0.126 Sum_probs=221.5
Q ss_pred CcchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHH
Q 019567 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (339)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l 81 (339)
++..|.+++|+|.|+.+.+++.+.+.++..+++++.|+++||+|||+++..+.++.+++.+++ ..+++++.+++.|++
T Consensus 32 ~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~l 109 (405)
T TIGR00891 32 ALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLAC--GFAPGYITMFIARLV 109 (405)
T ss_pred HHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH--HHhccHHHHHHHHHH
Confidence 456789999999999999999999999999999999999999999999999999999999998 558999999999999
Q ss_pred HHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhcc--chHHHHHHHHHHHHHHHHHHhhc
Q 019567 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIG--ISGPFILFSSLGLLWLSTWTSKV 159 (339)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~--w~~~f~~~~~~~~~~~~~~~~~~ 159 (339)
.|++.+...+...+++.|++|+++|+++.++.+.+..+|..+++.+++.+.+..+ ||+.|++.++..++. +......
T Consensus 110 ~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~-~~~~~~~ 188 (405)
T TIGR00891 110 IGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFA-LWLRKNI 188 (405)
T ss_pred HHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHH-HHHHHhC
Confidence 9999999999999999999999999999999999999999999999999988776 999998866554443 3334445
Q ss_pred cCCCCCCCCCChHHH--HHHHhC-CccccccC-CC---ccHHHHhc-ch-hHHHHHHHHHhhHHHHHHHHHhhhhhhhhh
Q 019567 160 TNDPCNSPFVSKSEL--RLIQAG-KSDSVKKR-NP---PSLRHLLS-KL-PSWTVIIANITNNWGYFVLLSWMPIYFNTV 230 (339)
Q Consensus 160 ~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~-~~---~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 230 (339)
||++++++.+++++. +..++. +.++..+. .. ...++..+ ++ .+........+..........++|.|++++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (405)
T TIGR00891 189 PEAEDWKEKHAGKALVRTMVDILYGGEHRIANIVMTLAAAMVQSAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKAD 268 (405)
T ss_pred CCChhHHHHhhhhhhhhhHHHHHhccchhhhhhhhhhhHHhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHH
Confidence 665432211111100 000000 00000000 00 00111111 11 122233333344444556677889999888
Q ss_pred hCCccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhh-HhhhhhcccchhHHHHHHHHHH
Q 019567 231 FNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGV-SLLCLNYAKSPAVAAVLITIAL 309 (339)
Q Consensus 231 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 309 (339)
+|++..+.+.+.....++.++++++.+++.||+++| +.+..+.....+ ........++.+.......+..
T Consensus 269 ~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (405)
T TIGR00891 269 LGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRR---------KAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQ 339 (405)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch---------hhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHH
Confidence 899999999999999999999999999999999876 233333333322 2222222233332222212222
Q ss_pred HHhhhcccchhhhhh--hcccchhhhhhhh
Q 019567 310 SLSSFSQAGYLLNIQ--IAQDFSTALQIQQ 337 (339)
Q Consensus 310 ~~~~~~~~~~~~~~~--~~p~~~g~~~g~q 337 (339)
.+.....+....... ..++++|+.+|..
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 369 (405)
T TIGR00891 340 MLVQGIWGILPKHLGEYFPTDQRAAGLGFT 369 (405)
T ss_pred HHHccchhhHHHHHhhhCCcchhHHHhhHH
Confidence 222222333333344 5557888888764
No 31
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=4.3e-32 Score=247.97 Aligned_cols=257 Identities=21% Similarity=0.219 Sum_probs=191.0
Q ss_pred CcchhhhHhHhCCCccc-hhH-----HHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhH-
Q 019567 2 SVAVVPLAAKFGWSSSF-LGI-----VQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTAS- 74 (339)
Q Consensus 2 ~~~~~~i~~~~~~s~~~-~g~-----~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~- 74 (339)
+...|.+.++++.+.++ .++ ..++..+++.+++++.|+++||+|||+++..+.++++++++++ ++++|++.
T Consensus 36 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~--a~~~~~~~~ 113 (490)
T PRK10642 36 GFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCI--GLIPSYATI 113 (490)
T ss_pred HHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH--HhcccHHHH
Confidence 34678889998754432 222 2477789999999999999999999999999999999999999 55899864
Q ss_pred -------HHHHHHHHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhh--------hhccchH
Q 019567 75 -------LLAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIML--------STIGISG 139 (339)
Q Consensus 75 -------~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~--------~~~~w~~ 139 (339)
+++.|+++|++.|..++...+++.|++|+|+|+++.++...+..+|..+++.+...+. +++|||+
T Consensus 114 g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~ 193 (490)
T PRK10642 114 GIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRI 193 (490)
T ss_pred HHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHH
Confidence 8899999999999999999999999999999999999999888888888887665443 2579999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcc-hhHHH-HHHHHHhhHHHHH
Q 019567 140 PFILFSSLGLLWLSTWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSK-LPSWT-VIIANITNNWGYF 217 (339)
Q Consensus 140 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~ 217 (339)
.|++.+++.++ .+......||+|++.+..++.+++ ..+..++++..++++++++ ++.+. .....++....++
T Consensus 194 ~f~i~~~~~l~-~~~~~~~~~esp~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (490)
T PRK10642 194 PFFIALPLGII-GLYLRHALEETPAFQQHVDKLEQG-----DREGLQDGPKVSFKEIATKHWRSLLTCIGLVIATNVTYY 267 (490)
T ss_pred HHHHHHHHHHH-HHHHHHcCCCChhHHHHHHhhhhh-----ccccccccccCCHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 99997765554 333445567776532111110000 0000011123356666653 23222 2233344566778
Q ss_pred HHHHhhhhhhhhhhCCccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHh
Q 019567 218 VLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKA 266 (339)
Q Consensus 218 ~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~ 266 (339)
....|+|.|+++.+|++..+.+.......++..++.++.|+++||+|||
T Consensus 268 ~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr 316 (490)
T PRK10642 268 MLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRR 316 (490)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH
Confidence 8889999999887899888877777777788889999999999999976
No 32
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=100.00 E-value=2.7e-31 Score=236.67 Aligned_cols=268 Identities=16% Similarity=0.145 Sum_probs=218.2
Q ss_pred cchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHH
Q 019567 3 VAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFF 82 (339)
Q Consensus 3 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~ 82 (339)
+.+|.+.+|+|.|+.+.++..+.+.++..+++++.|+++||+|||+.+..+.++..++.+.+ ..++|++.+++.|+++
T Consensus 24 ~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~--~~~~~~~~~~~~~~l~ 101 (392)
T PRK10473 24 VGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLC--SLAETSSLFLAGRFLQ 101 (392)
T ss_pred hhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHH--HHhCcHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999988 5588999999999999
Q ss_pred HhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhccCC
Q 019567 83 GLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTND 162 (339)
Q Consensus 83 G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~ 162 (339)
|++.+...+...+++.|++|+++|++++++.+....+|..++|.+++.+.+..+||+.|++.++..++..+......||+
T Consensus 102 g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~ 181 (392)
T PRK10473 102 GIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKET 181 (392)
T ss_pred HhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999989999999999999999999999999999999999999999988889999999999888877777666666765
Q ss_pred CCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccchhhHhh
Q 019567 163 PCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFS 242 (339)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~ 242 (339)
++++++.+ ++..+..++.+++|+++...+...+..........+.|.++++.+|+++.+.+.+.
T Consensus 182 ~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 245 (392)
T PRK10473 182 RPARAPAA----------------SSKPRENSESLLNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMGFSRGEYAIIM 245 (392)
T ss_pred CCcccCCc----------------cchHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCCCHHHHHHHH
Confidence 43321110 00112345677888877665555554444555667778888888899999999988
Q ss_pred HHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhcccc
Q 019567 243 AVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKS 297 (339)
Q Consensus 243 ~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (339)
....+..+++.++.+++.||+++| .....+..+..++..++...++
T Consensus 246 ~~~~~~~i~~~~~~~~l~~r~g~~---------~~~~~~~~~~~~~~~~~~~~~~ 291 (392)
T PRK10473 246 ALTAGVSMTVSFSTPFALGIFKPR---------TLMLTSQVLFLAAGITLALSPS 291 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHH---------HHHHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999999999875 3444555555555554444433
No 33
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=100.00 E-value=2.5e-31 Score=240.73 Aligned_cols=263 Identities=18% Similarity=0.249 Sum_probs=205.4
Q ss_pred cchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhh--hcchhHHHHHHH
Q 019567 3 VAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAA--THSTASLLAVRA 80 (339)
Q Consensus 3 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~r~ 80 (339)
+..|.+.++ |+|+.+.++..+.+.+++.+++++.|+++||+|||+++..+.++.+++.+.+++.. +++++.+++.|+
T Consensus 50 ~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 128 (452)
T PRK11273 50 LAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLF 128 (452)
T ss_pred HhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHH
Confidence 467888888 99999999999999999999999999999999999999999999999988874421 247888899999
Q ss_pred HHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHH-HHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhc
Q 019567 81 FFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNV-VGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKV 159 (339)
Q Consensus 81 l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~-~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~ 159 (339)
+.|++.+...+.....+.|++|+|+|++++++++.+.++|.. .+|+++..+....+||+.|++.++++++..++..++.
T Consensus 129 l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~ 208 (452)
T PRK11273 129 LCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMM 208 (452)
T ss_pred HHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHc
Confidence 999999998888888999999999999999999999999875 4555444444445999999999888877777777777
Q ss_pred cCCCCCCCCCChHHHHHH-HhC-CccccccCCCcc--HHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCcc
Q 019567 160 TNDPCNSPFVSKSELRLI-QAG-KSDSVKKRNPPS--LRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNL 235 (339)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ 235 (339)
||+|++....++++.+.. .+. +.+++++.+..+ .+.++|+|.+|...+..++.....+....|+|.|++++.|++.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~ 288 (452)
T PRK11273 209 RDTPQSCGLPPIEEYKNDYPDDYNEKHEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFAL 288 (452)
T ss_pred cCCHhhcCCCChhhhhhccccccccccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCH
Confidence 877665322222111100 000 000001111111 1336788999998888888888888888999999999889999
Q ss_pred chhhHhhHHhHHHHHHHHhhhhhhhHHHHHh
Q 019567 236 KQAAWFSAVPWGTMAVSGYMAGKASDSLIKA 266 (339)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~ 266 (339)
.+++....+..++.+++.++.|+++||++++
T Consensus 289 ~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~ 319 (452)
T PRK11273 289 DKSSWAYFLYEYAGIPGTLLCGWMSDKVFRG 319 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 9999888888889999999999999999543
No 34
>PRK10504 putative transporter; Provisional
Probab=100.00 E-value=4.6e-31 Score=240.71 Aligned_cols=325 Identities=12% Similarity=0.089 Sum_probs=240.0
Q ss_pred CcchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHH
Q 019567 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (339)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l 81 (339)
++.+|.+.+|+|.|+.+.+++.+.+.++..++.++.|+++||+|||+++..+.++.+++.+.+ ..+++++.+++.|++
T Consensus 30 ~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~l 107 (471)
T PRK10504 30 NTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFC--ALSGTLNELLLARVL 107 (471)
T ss_pred HHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHH--HHhCCHHHHHHHHHH
Confidence 356899999999999999999999999999999999999999999999999999999999888 558999999999999
Q ss_pred HHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhccC
Q 019567 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTN 161 (339)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~ 161 (339)
+|++.+...+....++.|++|+++|+++.++.....++|..++|.+++.+.++.+||+.|.+..+...+..+......|+
T Consensus 108 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~ 187 (471)
T PRK10504 108 QGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMPN 187 (471)
T ss_pred HHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999888777766666656565
Q ss_pred CCCCCCCCChHHHHH-----------HHhCCc------------------------cccccCCCccHHHHhcchhHHHHH
Q 019567 162 DPCNSPFVSKSELRL-----------IQAGKS------------------------DSVKKRNPPSLRHLLSKLPSWTVI 206 (339)
Q Consensus 162 ~~~~~~~~~~~~~~~-----------~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~ 206 (339)
.+.+.++.+...... .+..+. ++++.+++....+++|||+++...
T Consensus 188 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l 267 (471)
T PRK10504 188 YTMQTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNNNRALFSLKLFRTRTFSLGL 267 (471)
T ss_pred ccccCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHhcccchHHHH
Confidence 543332222111000 000000 011111112223588999998888
Q ss_pred HHHHhhHHHHHHHHHhhhhhhhhhhCCccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhh
Q 019567 207 IANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPG 286 (339)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (339)
...++..........+.|.|+++.+|.++.+.++......++.+++.++.+++.||+++| +.+..+..+.+
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~---------~~~~~~~~~~~ 338 (471)
T PRK10504 268 AGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYR---------RVLVATTLGLA 338 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch---------HHHHHHHHHHH
Confidence 888888777777778899999987899999999998888888888889999999999875 44445555444
Q ss_pred hHhhhhhccc--chhH-HHHHHHHHHHHhhhcccchhhhhh--hcccchhhhhhhh
Q 019567 287 VSLLCLNYAK--SPAV-AAVLITIALSLSSFSQAGYLLNIQ--IAQDFSTALQIQQ 337 (339)
Q Consensus 287 ~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~~g~~~g~q 337 (339)
+...++.... +... ............+...+....... ..++.+|..++..
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 394 (471)
T PRK10504 339 LVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLL 394 (471)
T ss_pred HHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHH
Confidence 4444333321 2111 111122222333333344444444 5567777776654
No 35
>PRK10133 L-fucose transporter; Provisional
Probab=100.00 E-value=4.2e-31 Score=237.45 Aligned_cols=310 Identities=12% Similarity=0.093 Sum_probs=226.7
Q ss_pred CcchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhh-hhhcchhHHHHHHH
Q 019567 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPW-AATHSTASLLAVRA 80 (339)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~r~ 80 (339)
++..|.+++++|+|+.+.++..+.+.+++.+++++.|+++||+|||+++..+.++++++++++.. ..++|++.++++|+
T Consensus 46 ~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~ 125 (438)
T PRK10133 46 DILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLF 125 (438)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 35689999999999999999999999999999999999999999999999999999999987521 34789999999999
Q ss_pred HHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhh-----------------h---------
Q 019567 81 FFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLS-----------------T--------- 134 (339)
Q Consensus 81 l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~-----------------~--------- 134 (339)
++|+|.+...+..+.++.|+.|+++|.+.+++.+..+.+|..+++.+++.+.. .
T Consensus 126 l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~~ 205 (438)
T PRK10133 126 IIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHSLV 205 (438)
T ss_pred HHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhHHHHHHHHH
Confidence 99999999999999999998877777778999999999999999998875430 0
Q ss_pred ccchHHHHHHHHHH-HHHHHHHHhhccCCCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhH
Q 019567 135 IGISGPFILFSSLG-LLWLSTWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNN 213 (339)
Q Consensus 135 ~~w~~~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (339)
.+||++|+....+. ++..+......||.+++++. + +++++...+.++++++|.++...+..++..
T Consensus 206 ~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~~~~----~----------~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~ 271 (438)
T PRK10133 206 LSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNHS----D----------AKQGSFSASLSRLARIRHWRWAVLAQFCYV 271 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccc----c----------ccccchhhhHHHHHhCchHHHHHHHHHHHH
Confidence 25677776544333 33222222223332211100 0 011111234578889999888777777777
Q ss_pred HHHHHHHHhhhhhh-hhhhCCccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhh
Q 019567 214 WGYFVLLSWMPIYF-NTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCL 292 (339)
Q Consensus 214 ~~~~~~~~~~~~~l-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (339)
...+....|.+.|+ ++.+|+++.+++.......++.++++++.+++.||+++| +.+..+.++....+.+.
T Consensus 272 ~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~---------~~l~~~~~~~~~~~~~~ 342 (438)
T PRK10133 272 GAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPH---------KVLAAYALIAMALCLIS 342 (438)
T ss_pred HHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH---------HHHHHHHHHHHHHHHHH
Confidence 88887888999885 566899999999999999999999999999999999876 33344444433333333
Q ss_pred hcccchhHHHHHHHHHHHHhhhcccchhhhhh-hcccchhhhhh
Q 019567 293 NYAKSPAVAAVLITIALSLSSFSQAGYLLNIQ-IAQDFSTALQI 335 (339)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~g~~~g 335 (339)
...++. .....+.+.+.+.+...+...+... ..|++.+..++
T Consensus 343 ~~~~~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~~~~as~ 385 (438)
T PRK10133 343 AFAGGH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQDTKYGSS 385 (438)
T ss_pred HHcCCh-HHHHHHHHHHHHHHHHHHHHHHHHHcccchhhccchh
Confidence 333332 2233344445555666666666555 56666655554
No 36
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=100.00 E-value=3.8e-31 Score=234.32 Aligned_cols=306 Identities=15% Similarity=0.044 Sum_probs=221.3
Q ss_pred cchhh-hHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHH-HHHHHHHHHHHHhhhhhcchhHHHHHHH
Q 019567 3 VAVVP-LAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAW-GVALWSLSTLLTPWAATHSTASLLAVRA 80 (339)
Q Consensus 3 ~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 80 (339)
|.+|. +++|+|.|+.+.|++.+.+.+...+.+++.|+++||+||||.++. +..+..++.+++ +.++|++.+++.|+
T Consensus 18 ~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~ 95 (375)
T TIGR00899 18 PTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLF--AWNRNYFLLLVLGV 95 (375)
T ss_pred hHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHH--HhcchHHHHHHHHH
Confidence 44554 678999999999999999999999999999999999999887654 556666677777 55899999999999
Q ss_pred HHHhhhhcchhhhHHHHhhhCCcchhhHH--HHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhh
Q 019567 81 FFGLAEGVAMPAMSTLTSRWFPSHERASA--IGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSK 158 (339)
Q Consensus 81 l~G~g~~~~~~~~~~~i~~~~~~~~r~~~--~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~ 158 (339)
++|.+.+...|...+++.|+.|+++|++. .+....+.++|..++|++++.+.+..+||+.|++.++..++..+..++.
T Consensus 96 ~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~ 175 (375)
T TIGR00899 96 LLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWLF 175 (375)
T ss_pred HHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHh
Confidence 99988888888888999999887777654 6888888999999999999999999999999999988877777666666
Q ss_pred ccCCCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccchh
Q 019567 159 VTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQA 238 (339)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~ 238 (339)
.||.|+++++++ ...+.++.+++|+++......++..........+.|.|+++++|.++.+.
T Consensus 176 ~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 237 (375)
T TIGR00899 176 LPSYPRGAPGAL------------------TRLEVRGLLASRDTRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLA 237 (375)
T ss_pred CCCcccCccccc------------------CcchhhhhhcCcchHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHH
Confidence 777654322110 01123446677777766655555555555566788999988889999999
Q ss_pred hHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhcccchhHHHHHHHHHHHHhhhcccc
Q 019567 239 AWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAG 318 (339)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (339)
+.+........+++.++.|++.||+++| +....+.+...+....+...++.+.......+.....+...+.
T Consensus 238 g~~~~~~~~~~~~~~~~~g~l~~r~g~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 308 (375)
T TIGR00899 238 GLMMGTAAGLEIPFMLLAGYLIKRFGKR---------RLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILAGI 308 (375)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHhcch---------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9888777777788889999999999876 2333344444444434333334333333323333333333333
Q ss_pred hhhhhh-hcccchhhhhhhh
Q 019567 319 YLLNIQ-IAQDFSTALQIQQ 337 (339)
Q Consensus 319 ~~~~~~-~~p~~~g~~~g~q 337 (339)
...... ..|++++..++..
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~ 328 (375)
T TIGR00899 309 GMLYFQDLMPGRAGAATTLY 328 (375)
T ss_pred HHHHHHHhCcchhhHHHHHH
Confidence 444444 6677777666543
No 37
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=2e-31 Score=240.08 Aligned_cols=256 Identities=16% Similarity=0.196 Sum_probs=197.7
Q ss_pred CcchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHH
Q 019567 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (339)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l 81 (339)
++..|.+++|+|+|+.+.++..+.+.+++.+++++.|+++||+|||+++..+.++.+++.+++ +.+++++.++++|++
T Consensus 38 ~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~--~~~~~~~~l~~~r~l 115 (426)
T PRK12307 38 FYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLS--GLASGVIMLTLSRFI 115 (426)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH--HHHhHHHHHHHHHHH
Confidence 356788999999999999999999999999999999999999999999999999999999998 558999999999999
Q ss_pred HHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhccC
Q 019567 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTN 161 (339)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~ 161 (339)
+|++.+...+....++.|++|+|+|++++++...+.++|.++++.+.+.+.+..+||+.|++.....++ ........||
T Consensus 116 ~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~~~~-~~~~~~~~p~ 194 (426)
T PRK12307 116 VGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLPVLL-VIYIRARAPE 194 (426)
T ss_pred HHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHHHHH-HHHHHHHCCC
Confidence 999999999999999999999999999999999999999999999999999999999999875433222 2222212233
Q ss_pred CCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHH---HhhHHHHHHHHHhhhhhhhhhhCCccchh
Q 019567 162 DPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIAN---ITNNWGYFVLLSWMPIYFNTVFNVNLKQA 238 (339)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~g~~~~~~ 238 (339)
++++.++ +.+ .+.++.++..+....++++++++|.++...... +......+....++|.|+++ .|.++.+.
T Consensus 195 ~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~ 268 (426)
T PRK12307 195 SKEWEEA----KLS-GKGKHSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAG-EGFDTGVV 268 (426)
T ss_pred ChHHHHh----hhh-ccccccccchhhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHH
Confidence 3211100 000 000000001111122567888888776543322 22223334467789999988 59999899
Q ss_pred hHhhHHhHHHHHHHHhhhhhhhHHHHHh
Q 019567 239 AWFSAVPWGTMAVSGYMAGKASDSLIKA 266 (339)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~g~l~d~~~~~ 266 (339)
+.......+++++++++.|++.||+++|
T Consensus 269 ~~~~~~~~~~~~~g~~~~g~l~dr~~~~ 296 (426)
T PRK12307 269 SNLMTAAAFGTVLGNIVWGLCADRIGLK 296 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccH
Confidence 9888888999999999999999999875
No 38
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=100.00 E-value=7.6e-31 Score=230.65 Aligned_cols=264 Identities=15% Similarity=0.157 Sum_probs=209.5
Q ss_pred CCcchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHH
Q 019567 1 MSVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRA 80 (339)
Q Consensus 1 ~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 80 (339)
+++.+|.+++|+|.|+++.++..+.+.+++.+++++.|+++||+|||+++..+.++..++.+.+ . +++.+.+++.|+
T Consensus 19 ~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~--~~~~~~l~~~~~ 95 (355)
T TIGR00896 19 VGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-S--APGTALLFAGTA 95 (355)
T ss_pred CcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-H--hccHHHHHHHHH
Confidence 3688999999999999999999999999999999999999999999999999998888877765 2 688999999999
Q ss_pred HHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhc--cchHHHHHHHHHHHHHHHHHHhh
Q 019567 81 FFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTI--GISGPFILFSSLGLLWLSTWTSK 158 (339)
Q Consensus 81 l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~--~w~~~f~~~~~~~~~~~~~~~~~ 158 (339)
+.|++.+...+....++.|++| ++|++++++.+...++|..+++.+++.+.++. +||+.|...++..++.... .
T Consensus 96 ~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~~---~ 171 (355)
T TIGR00896 96 LIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLALLA---W 171 (355)
T ss_pred HHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHH---H
Confidence 9999999888888889999986 68999999999999999999999998888765 3999998776654443222 2
Q ss_pred ccCCCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccchh
Q 019567 159 VTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQA 238 (339)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~ 238 (339)
.|+.+++++. +++..+...++.+|+|.++...+..++....++....++|.|+++ .|.+..+.
T Consensus 172 ~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~~~ 234 (355)
T TIGR00896 172 IPQVRRRVAA----------------NQTTTRLTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASAATA 234 (355)
T ss_pred hhhhccccCC----------------CCCCCCCCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHH
Confidence 3333221110 000111234567888988887777777777788888999999987 69999999
Q ss_pred hHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhccc
Q 019567 239 AWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAK 296 (339)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (339)
+.+.+...++.++++++.|++.||+++| +.....+..+.+++...+...+
T Consensus 235 g~~~~~~~~~~i~~~~~~g~l~dr~~~~--------~~~~~~~~~~~~~~~~~~~~~~ 284 (355)
T TIGR00896 235 GSLLALMQLAQAASALLIPALARRVKDQ--------RGIVAVLAVLQLVGLCGLLFAP 284 (355)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHhhhccc--------hHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999654 2444455555555554444443
No 39
>PRK11043 putative transporter; Provisional
Probab=100.00 E-value=9.9e-31 Score=233.69 Aligned_cols=309 Identities=16% Similarity=0.132 Sum_probs=228.0
Q ss_pred CcchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHH
Q 019567 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (339)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l 81 (339)
.|..|++++|+|.|+++.++..+++.++..+++++.|+++||+|||+.+..+..+..++.+++ ..+++++.+++.|++
T Consensus 26 ~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~l 103 (401)
T PRK11043 26 LPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGM--LWVESAAQLLVLRFV 103 (401)
T ss_pred HhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHH--HHhcCHHHHHHHHHH
Confidence 356788999999999999999999999999999999999999999999999999999999888 558999999999999
Q ss_pred HHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhccC
Q 019567 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTN 161 (339)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~ 161 (339)
+|++.+...+...+++.|++|++++++..+.......+|..++|.+++.+.++.|||+.|++.++..++..+..+.. +|
T Consensus 104 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~ 182 (401)
T PRK11043 104 QAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRL-KP 182 (401)
T ss_pred HHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHc-CC
Confidence 99998888888889999999999999999999999999999999999999999999999999888877766555443 43
Q ss_pred CCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccchhhHh
Q 019567 162 DPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWF 241 (339)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~ 241 (339)
+++++++ + +.+.++++++|+|+++...+.........+....+.|.++++ +|+++.+.+..
T Consensus 183 ~~~~~~~--~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~g~~ 243 (401)
T PRK11043 183 SKKARKQ--S----------------QDALTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILEQ-MGYSPADIGLS 243 (401)
T ss_pred CCCcccc--c----------------hHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHHHH-cCCCHHHHHHH
Confidence 3321110 0 011246778888888776666555566666777888988876 69999999988
Q ss_pred hHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhc--ccchhHHHHHHHHHHHHhhhcccch
Q 019567 242 SAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNY--AKSPAVAAVLITIALSLSSFSQAGY 319 (339)
Q Consensus 242 ~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (339)
.....++.++++++.+++.||+++|+. .........+.......... .++.+.......+.....+...+..
T Consensus 244 ~~~~~~~~~~g~~~~~~l~~r~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (401)
T PRK11043 244 YVPQTIAFLVGGYGCRAALQKWGGEQL------LPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAANGAIYPIV 317 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCHHHH------HHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 777778888899999999999876510 11111222222222222221 2232222222223333333444444
Q ss_pred hhhhh-hcccchhhhhhhhc
Q 019567 320 LLNIQ-IAQDFSTALQIQQE 338 (339)
Q Consensus 320 ~~~~~-~~p~~~g~~~g~q~ 338 (339)
..... ..|+++|..+|.++
T Consensus 318 ~~~~~~~~~~~~g~~~g~~~ 337 (401)
T PRK11043 318 VAQALRPFPQATGKAAALQN 337 (401)
T ss_pred HHHHhhhCcccChHHHHHHH
Confidence 33333 55788888887654
No 40
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=100.00 E-value=3.3e-30 Score=229.77 Aligned_cols=309 Identities=15% Similarity=0.145 Sum_probs=231.3
Q ss_pred CcchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHH
Q 019567 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (339)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l 81 (339)
.|.+|.+.+|+|.|+.+.++..+.+.+++.+++++.|+++||+|||+++..+..+..++.+.+ ..++|++.+++.|++
T Consensus 28 ~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~ 105 (394)
T PRK11652 28 VPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVA--LFAHSLTVLIAASAI 105 (394)
T ss_pred hccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHH--HHHccHHHHHHHHHH
Confidence 467899999999999999999999999999999999999999999999999999999999988 558999999999999
Q ss_pred HHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhccC
Q 019567 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTN 161 (339)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~ 161 (339)
.|++.+...+....+..|.+++++++++.++.+.+..++..++|.+++.+.+..|||+.|++.++..++..+......||
T Consensus 106 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~ 185 (394)
T PRK11652 106 QGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPE 185 (394)
T ss_pred HHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 99999888888888999999999999999999999999999999999999998999999999888777666555556676
Q ss_pred CCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccchhhHh
Q 019567 162 DPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWF 241 (339)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~ 241 (339)
+++++++.. + ...++++++++|+++...+..+........+..+.+.++++.+|+++.+.+.+
T Consensus 186 ~~~~~~~~~--~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 248 (394)
T PRK11652 186 TRPADARRT--R---------------VLASYRTLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMTVSIL 248 (394)
T ss_pred cCccccchh--H---------------HHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHHHHcCCCHHHHHHH
Confidence 543321110 0 11246678888888776666665555666667778889988889999888888
Q ss_pred hHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhc--ccchhHHHHHHHHHHHHhhhcccch
Q 019567 242 SAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNY--AKSPAVAAVLITIALSLSSFSQAGY 319 (339)
Q Consensus 242 ~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (339)
.....++.+++..+.+++.||.+++ ......+.....+....... ..+.+.......+.....+...+..
T Consensus 249 ~~~~~~~~~~g~~~~~~l~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 320 (394)
T PRK11652 249 FILPIPAAFFGAWFAGRPNKRFSTL--------MWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAGMLFPLA 320 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 8777777788888888888887632 22222222222222222221 1223333333333333344444444
Q ss_pred hhhhh-hcccchhhhhhhh
Q 019567 320 LLNIQ-IAQDFSTALQIQQ 337 (339)
Q Consensus 320 ~~~~~-~~p~~~g~~~g~q 337 (339)
..... ..|+++|...+.+
T Consensus 321 ~~~~~~~~~~~~g~~~~~~ 339 (394)
T PRK11652 321 TSGAMEPFPYLAGTAGALL 339 (394)
T ss_pred HHHHHhhccccchHHHHHH
Confidence 55445 6678888877654
No 41
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=100.00 E-value=1.5e-30 Score=232.25 Aligned_cols=250 Identities=14% Similarity=0.084 Sum_probs=198.2
Q ss_pred chhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhh-hh-hcchhHHHHHHHH
Q 019567 4 AVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPW-AA-THSTASLLAVRAF 81 (339)
Q Consensus 4 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~r~l 81 (339)
.+|++.+|+|.|+++.++..+.+.+++.+++++.|+++||+|||+++..+.++.+++.+++.+ .. .+|++.+++.|++
T Consensus 35 ~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i 114 (402)
T TIGR00897 35 WLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGI 114 (402)
T ss_pred hHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHH
Confidence 456777899999999999999999999999999999999999999999999999888765521 12 3578888999999
Q ss_pred HHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHH-HHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhcc
Q 019567 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGN-VVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVT 160 (339)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~-~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~ 160 (339)
+|++.+...+.....+.|++|+|+|++++|+.+.+.++|. .++|.+++.+.+..||+..++.......+..++..+..+
T Consensus 115 ~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 194 (402)
T TIGR00897 115 RGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGVIALFSNK 194 (402)
T ss_pred HHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhccC
Confidence 9999988888888889999999999999999999999997 689999999988889776655544433333333444444
Q ss_pred CCCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccchhhH
Q 019567 161 NDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAW 240 (339)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~ 240 (339)
+.+++++.+++ + +.++....+++++|+|+++...+..++.....+...++.|.|+++ +|++..+.+.
T Consensus 195 ~~~~~~~~~~~-~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~ 261 (402)
T TIGR00897 195 DIFTPQHMQTR-E-----------KFSELGKAATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAE-LGFSTSEWLQ 261 (402)
T ss_pred CCCCcccccCC-c-----------chhhHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhHHHH
Confidence 43221111000 0 001111245678899999988888888888888889999999877 7999999998
Q ss_pred hhHHhHHHHHHHHhhhhhhhHHHHHh
Q 019567 241 FSAVPWGTMAVSGYMAGKASDSLIKA 266 (339)
Q Consensus 241 ~~~~~~~~~~~~~~~~g~l~d~~~~~ 266 (339)
+.....+++.++++..|+++||+++|
T Consensus 262 ~~~~~~~~~~ig~~~~g~l~dr~~~~ 287 (402)
T TIGR00897 262 IWGTFFFTNIVFNVIFGIVGDKLGWM 287 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcch
Confidence 88888899999999999999999875
No 42
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=100.00 E-value=4.1e-31 Score=239.11 Aligned_cols=327 Identities=16% Similarity=0.081 Sum_probs=230.2
Q ss_pred CcchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHH-HHH
Q 019567 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLA-VRA 80 (339)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~r~ 80 (339)
++..|++.+++|.|.++.+++.+.+.++..++.++.|+++||+|||++++.+.++..++++.+ +.+++++.+++ .|+
T Consensus 39 ~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~ 116 (455)
T TIGR00892 39 TVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILA--SFSSNVIELYLTAGF 116 (455)
T ss_pred hhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHH--HHhhhHHHHHHHHHH
Confidence 467899999999999999999999999999999999999999999999999999999999998 55788888865 579
Q ss_pred HHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhcc
Q 019567 81 FFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVT 160 (339)
Q Consensus 81 l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~ 160 (339)
++|++.+...+....++.++++ ++|++++++.+.+..+|..++|++++.+.+.+|||+.|++.+++.++..+..++..+
T Consensus 117 l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~~~ 195 (455)
T TIGR00892 117 ITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALMRP 195 (455)
T ss_pred HHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999877788889999995 889999999999999999999999999999999999999999887766555444444
Q ss_pred CCCCCCCCCCh-HHHHHHHhCCcc---c--cccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCc
Q 019567 161 NDPCNSPFVSK-SELRLIQAGKSD---S--VKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVN 234 (339)
Q Consensus 161 ~~~~~~~~~~~-~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~ 234 (339)
+.++++....+ ++....+...++ + .++..+....+++++|+++......++.....+....++|.|+++ .|++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g~s 274 (455)
T TIGR00892 196 VGPSQRVSKSKSKEGLPPDGSTKKLSKKSTAEKINRFLDFSLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKD-KGVD 274 (455)
T ss_pred CCcccccccccccccCCCCCccccccccchhhhhhhhcchHHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHH-cCCC
Confidence 32211100000 000000000000 0 000001111257789999888887777777777788899999987 6999
Q ss_pred cchhhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhcccchhHHHHHHHHHHHHhhh
Q 019567 235 LKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSF 314 (339)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (339)
..+++.+.++.+++.++++++.|++.||...+.. ++..+..+.+..+++.++....++.+...+..++.+...+.
T Consensus 275 ~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~-----~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~ 349 (455)
T TIGR00892 275 EYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPH-----VQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGS 349 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHH-----HHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhch
Confidence 9999999999999999999999999997321100 22333333444344444444444444333333333333333
Q ss_pred cccchhhhhh--hcccchhhhhhhh
Q 019567 315 SQAGYLLNIQ--IAQDFSTALQIQQ 337 (339)
Q Consensus 315 ~~~~~~~~~~--~~p~~~g~~~g~q 337 (339)
..+....... ..++++|...|..
T Consensus 350 ~~~~~~~~~~~~~~~~~~g~~~g~~ 374 (455)
T TIGR00892 350 VGALLFEVLMDLVGAQRFSSAVGLV 374 (455)
T ss_pred HHHHHHHHHHHHhhHHHHhhHHhHH
Confidence 3333334433 5556777776654
No 43
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=100.00 E-value=1.1e-30 Score=231.09 Aligned_cols=293 Identities=15% Similarity=0.141 Sum_probs=215.8
Q ss_pred CcchhhhHh-HhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhh---hhcchhHHHH
Q 019567 2 SVAVVPLAA-KFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWA---ATHSTASLLA 77 (339)
Q Consensus 2 ~~~~~~i~~-~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 77 (339)
+++.+.+.+ |+|+|++|.+++.+++.+++.++.++.|++.||+|.|+++.++.+++++.++..+++ ..+|++.+++
T Consensus 54 ~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli 133 (462)
T PRK15034 54 SAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIV 133 (462)
T ss_pred HHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHH
Confidence 456777766 899999999999999999999999999999999999999999999999999988542 1289999999
Q ss_pred HHHHHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhh-----h-------------hccchH
Q 019567 78 VRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIML-----S-------------TIGISG 139 (339)
Q Consensus 78 ~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~-----~-------------~~~w~~ 139 (339)
.|++.|++ +..++.....+++|+|+|+||+++|+.....++|..+++++...+. + ..+||.
T Consensus 134 ~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~ 212 (462)
T PRK15034 134 IALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLAN 212 (462)
T ss_pred HHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHH
Confidence 99999998 7788999999999999999999999997777777776666554432 2 334788
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHH
Q 019567 140 PFILFSSLGLLWLSTWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVL 219 (339)
Q Consensus 140 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (339)
++++..++.++..++.++..++.++++ ....+.++++|+|+.|...+.+++.+..+.++
T Consensus 213 ~~~~~~~~~iv~~i~~~~~~~~~~~~~---------------------~~~~~~~~vlk~~~~Wllslly~~tFG~fvg~ 271 (462)
T PRK15034 213 AAWIWVPLLAIATIAAWSGMNDIASSR---------------------ASIADQLPVLQRLHLWLLSLLYLATFGSFIGF 271 (462)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCccccc---------------------cCHHHHHHHhCCCchhHHHHHHHHHHHHHHHH
Confidence 888888887777777666655543211 11124677899999999999999999999999
Q ss_pred HHhhhhhhhhhhCCccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHh-hhhhccc--
Q 019567 220 LSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSL-LCLNYAK-- 296 (339)
Q Consensus 220 ~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-- 296 (339)
..++|.|+++.+ +.........+..+...+.++++|+++||+|++ +++..+++...++. ..+...+
T Consensus 272 s~~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~---------~vl~~~~i~~~i~~~~~~l~lp~~ 340 (462)
T PRK15034 272 SAGFAMLAKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDKFGGV---------RVTLINFIFMAIFSALLFLTLPGT 340 (462)
T ss_pred HHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCch---------HHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999998854 333333333344567888999999999999976 33334443333332 2122222
Q ss_pred ---chhHHHHHHHHHHHHhhhcccchhhhhh-hcc
Q 019567 297 ---SPAVAAVLITIALSLSSFSQAGYLLNIQ-IAQ 327 (339)
Q Consensus 297 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p 327 (339)
+.+.....++..+...+...+...-... ..|
T Consensus 341 ~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~ 375 (462)
T PRK15034 341 GSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFR 375 (462)
T ss_pred cccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHh
Confidence 2233333333444555666666665544 445
No 44
>TIGR00895 2A0115 benzoate transport.
Probab=100.00 E-value=5.3e-31 Score=235.03 Aligned_cols=324 Identities=22% Similarity=0.273 Sum_probs=232.0
Q ss_pred CcchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHH
Q 019567 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (339)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l 81 (339)
++..|.+.+++|.++.+.+++.+.+.++..++.++.|+++||+|||+.+..+.++..++.++. ..+++++.+++.|++
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 114 (398)
T TIGR00895 37 GFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLC--ALATNVTQLLILRFL 114 (398)
T ss_pred HhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHH--HHccchHHHHHHHHH
Confidence 356788999999999999999999999999999999999999999999999999999998888 558999999999999
Q ss_pred HHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhccC
Q 019567 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTN 161 (339)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~ 161 (339)
.|++.+...+...+++.|++|+++|++++++...+..+|..+++.+++.+.+..+||+.|++.++..++..+......||
T Consensus 115 ~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (398)
T TIGR00895 115 AGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPE 194 (398)
T ss_pred HhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999877777666666666777
Q ss_pred CCCCCCCCChHHH-H---HHHhC-Ccc-----ccccC---CCcc-HHHHhcc---hhHHHHHHHHHhhHHHHHHHHHhhh
Q 019567 162 DPCNSPFVSKSEL-R---LIQAG-KSD-----SVKKR---NPPS-LRHLLSK---LPSWTVIIANITNNWGYFVLLSWMP 224 (339)
Q Consensus 162 ~~~~~~~~~~~~~-~---~~~~~-~~~-----~~~~~---~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (339)
+++...++++++. + ....+ ..+ ++++. .... .+.++++ +..+...+..++.....+....+.|
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (398)
T TIGR00895 195 SIDFLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLP 274 (398)
T ss_pred CChHHHhcCHHHHHHHHHHHHHhccccccccccccccccchhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6543211111110 0 00000 000 00000 1111 2223332 3344444555566666777778888
Q ss_pred hhhhhhhCCccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhcccchhHHHHH
Q 019567 225 IYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVL 304 (339)
Q Consensus 225 ~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (339)
.+. +..|.++.+.+.......++.++++++.+++.||+++| .......+.......+.....+.+.....
T Consensus 275 ~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (398)
T TIGR00895 275 KLM-VELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPR---------VTALLLLLGAVFAVLVGSTLFSPTLLLLL 344 (398)
T ss_pred HHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchH---------HHHHHHHHHHHHHHHHHHHhhCHHHHHHH
Confidence 554 44799999999999999999999999999999999864 23223333333333332223344333333
Q ss_pred HHHHHHHhhhcccchhhhhh--hcccchhhhhhhh
Q 019567 305 ITIALSLSSFSQAGYLLNIQ--IAQDFSTALQIQQ 337 (339)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~--~~p~~~g~~~g~q 337 (339)
.++.....+...+....... ..++++|+..|..
T Consensus 345 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 379 (398)
T TIGR00895 345 GAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWA 379 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHH
Confidence 33344444444455555555 5557788877754
No 45
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=1.1e-30 Score=243.88 Aligned_cols=324 Identities=12% Similarity=0.114 Sum_probs=232.4
Q ss_pred CcchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHH
Q 019567 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (339)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l 81 (339)
++++|.+.++++++..+.+++.+++.++..++++++|+++||+|||+++++++++.+++++++ +++++++.++++|++
T Consensus 187 s~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~--afa~s~~~llv~R~l 264 (742)
T TIGR01299 187 GFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFS--SFVQGYGFFLFCRLL 264 (742)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH--HHHhhHHHHHHHHHH
Confidence 456889999999999999999999999999999999999999999999999999999999998 558999999999999
Q ss_pred HHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhh-------------ccchHHHHHHHHHH
Q 019567 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLST-------------IGISGPFILFSSLG 148 (339)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~-------------~~w~~~f~~~~~~~ 148 (339)
.|++.+...+...+++.|++|+++|++.+++...++.+|.++++.++..+... .+||+.+++.++.+
T Consensus 265 ~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ 344 (742)
T TIGR01299 265 SGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPC 344 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999988776643 35899888877665
Q ss_pred HHHHHHHHhhccCCCCCCCCCChHHH--HH---HH--------------------hCCccc-----cccCCC--------
Q 019567 149 LLWLSTWTSKVTNDPCNSPFVSKSEL--RL---IQ--------------------AGKSDS-----VKKRNP-------- 190 (339)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~--------------------~~~~~~-----~~~~~~-------- 190 (339)
++. ++..++.||+|++.....+.++ +. .. ....++ +++...
T Consensus 345 ll~-ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (742)
T TIGR01299 345 VFA-IGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIKTIHQEDELIEIESDTGTWYQRCFVR 423 (742)
T ss_pred HHH-HHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHHHhhhhhhhhcccccccchhhcchhh
Confidence 554 4556678999875221111100 00 00 000000 000000
Q ss_pred ---------ccHHHHhcc---hhHHHHHHHHHhhHHHHHHHHHhhhhhhhhh----h-----------------CCccc-
Q 019567 191 ---------PSLRHLLSK---LPSWTVIIANITNNWGYFVLLSWMPIYFNTV----F-----------------NVNLK- 236 (339)
Q Consensus 191 ---------~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~-----------------g~~~~- 236 (339)
.+++++++. ++.+.+.+.+++..++++++..|+|.++++. + +++.+
T Consensus 424 ~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 503 (742)
T TIGR01299 424 ALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLSFGYYGLSVWFPDMIKHLQADDYAALTKNFPGDKVAHFSFNFTLEN 503 (742)
T ss_pred hhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccchhccccccchhh
Confidence 023444443 2456677888889999999999999876441 0 00000
Q ss_pred --------------------------------------------------------------------------------
Q 019567 237 -------------------------------------------------------------------------------- 236 (339)
Q Consensus 237 -------------------------------------------------------------------------------- 236 (339)
T Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c 583 (742)
T TIGR01299 504 QIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENTDFEEYKFIDSEFQNCSFLHNKEGC 583 (742)
T ss_pred hhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhccccchhhhhhhhhhhhhccccccCCcc
Confidence
Q ss_pred ------------hhhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhcccchhHHHHH
Q 019567 237 ------------QAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVL 304 (339)
Q Consensus 237 ------------~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (339)
.......+..++.+++.++.|+++||+||| .++..+.++.+++.+++.+.++.....+.
T Consensus 584 ~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr---------~~l~~~~~lsai~~ll~~~~~s~~~ll~~ 654 (742)
T TIGR01299 584 PIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRL---------RMLAGSMVLSCISCFFLSFGNSESAMIAL 654 (742)
T ss_pred CccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH---------HHHHHHHHHHHHHHHHHHHHccHHHHHHH
Confidence 012234456678899999999999999976 56677777888777777766655444433
Q ss_pred HHHHHHHhhhcccchhhhhh-hcc-cchhhhhhhh
Q 019567 305 ITIALSLSSFSQAGYLLNIQ-IAQ-DFSTALQIQQ 337 (339)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~-~~p-~~~g~~~g~q 337 (339)
.++..++.+...+....... ..| +.||+.+|..
T Consensus 655 ~~l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~ 689 (742)
T TIGR01299 655 LCLFGGLSIAAWNALDVLTVELYPSDKRATAFGFL 689 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 33333333444444444445 444 6788877754
No 46
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.5e-33 Score=236.80 Aligned_cols=326 Identities=18% Similarity=0.179 Sum_probs=241.1
Q ss_pred chhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHH
Q 019567 4 AVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFG 83 (339)
Q Consensus 4 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G 83 (339)
..+.+++.||+++++.|++++.+.+.+.+++|+.|+++||+.||+++.+|..+|+++.++++ ++..+|+++++|.+.|
T Consensus 55 v~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~--fs~~Fwq~~l~R~~vG 132 (493)
T KOG1330|consen 55 VLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASG--FSNHFWQVLLCRGFVG 132 (493)
T ss_pred hhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHH--HHHHHHHHHHHHHHhc
Confidence 46788999999999999999999999999999999999999999999999999999999994 4899999999999999
Q ss_pred hhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhcc-chHHHHHHHHHHHHHHHHHHhhccCC
Q 019567 84 LAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIG-ISGPFILFSSLGLLWLSTWTSKVTND 162 (339)
Q Consensus 84 ~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~-w~~~f~~~~~~~~~~~~~~~~~~~~~ 162 (339)
+|.+...|.++++++|.+|+++|++++++++.+.++|..+|.+.+..+.+..+ |||.|++.++++++..++.+++.+|+
T Consensus 133 iGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP 212 (493)
T KOG1330|consen 133 IGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREP 212 (493)
T ss_pred cchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCc
Confidence 99999999999999999999999999999999999999999999999988766 99999999999999999999888887
Q ss_pred CCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhh---hhCCccchhh
Q 019567 163 PCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNT---VFNVNLKQAA 239 (339)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~g~~~~~~~ 239 (339)
+++.++..+.+.+ .+++.....++.+.+.++|.+....+......+....+..|.|.+... ..|.+..+..
T Consensus 213 ~rga~~~~~~~~~------~~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ 286 (493)
T KOG1330|consen 213 ERGARDEVDGENK------MVKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATL 286 (493)
T ss_pred ccccccccccCCc------CCCCccchHHHHHHHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCccccch
Confidence 7643222111110 011222333455666676766665555555555555555666665543 2356666777
Q ss_pred HhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHH--HHhhhhhhHhhhhhccc--chhHHHHHHHHHHHHhhhc
Q 019567 240 WFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQS--IGFIGPGVSLLCLNYAK--SPAVAAVLITIALSLSSFS 315 (339)
Q Consensus 240 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 315 (339)
.+..+...++.+|.+.+|.++||+.++.++....|...+. .+....+..+.+..... +.+..++++.++.......
T Consensus 287 ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~~g~~~~~~~ 366 (493)
T KOG1330|consen 287 IFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLILFLVGETISWFN 366 (493)
T ss_pred hhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcc
Confidence 7778888899999999999999987764443333322222 22223333333333322 2333444444444444444
Q ss_pred ccchhhhhh--hcccchhhhhhhh
Q 019567 316 QAGYLLNIQ--IAQDFSTALQIQQ 337 (339)
Q Consensus 316 ~~~~~~~~~--~~p~~~g~~~g~q 337 (339)
.+...-... +.|++|.+++..|
T Consensus 367 ~a~n~~i~l~vV~p~~Rt~a~a~~ 390 (493)
T KOG1330|consen 367 WATNNPIFLEVVPPSRRTTAYALD 390 (493)
T ss_pred cccccceeeEecCcccccHHHHHH
Confidence 444444444 7788888887765
No 47
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=100.00 E-value=1.1e-30 Score=235.65 Aligned_cols=262 Identities=19% Similarity=0.258 Sum_probs=205.6
Q ss_pred chhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhh--hcchhHHHHHHHH
Q 019567 4 AVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAA--THSTASLLAVRAF 81 (339)
Q Consensus 4 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~r~l 81 (339)
..|.+++ +|+|+++.+++.+.+.++..+++++.|+++||+|||+++..+.++.+++.++.++.. .++++.+.+.|++
T Consensus 49 ~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l 127 (438)
T TIGR00712 49 AMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFL 127 (438)
T ss_pred hhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHH
Confidence 4566665 699999999999999999999999999999999999999999999999888773311 2467788899999
Q ss_pred HHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhh-hhccchHHHHHHHHHHHHHHHHHHhhcc
Q 019567 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIML-STIGISGPFILFSSLGLLWLSTWTSKVT 160 (339)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~-~~~~w~~~f~~~~~~~~~~~~~~~~~~~ 160 (339)
.|++.+..++.....+.|++|+++|++++++.+.+.++|..+++.+.+... ++.+||..|++.++++++..+..++..|
T Consensus 128 ~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~ 207 (438)
T TIGR00712 128 NGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMR 207 (438)
T ss_pred HHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999999999999988876544 4579999999999888887766677777
Q ss_pred CCCCCCCCCChHHHHH-HHhCCccccccC--CCc-cHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccc
Q 019567 161 NDPCNSPFVSKSELRL-IQAGKSDSVKKR--NPP-SLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLK 236 (339)
Q Consensus 161 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~ 236 (339)
|+|++.+..+.++.+. ..++..++++++ .+. ..+.++|++.+|...+..++.....++..+|+|.|+++..|+++.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~ 287 (438)
T TIGR00712 208 DTPQSCGLPPIEEYRNDYPDDYNEKAEQELTAKEIFMQYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALD 287 (438)
T ss_pred CCHHhcCCCCchhcccccccccccccccccchHHHHHHHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChh
Confidence 7665432111110000 000000000000 011 123467889999888887777777788889999999998899999
Q ss_pred hhhHhhHHhHHHHHHHHhhhhhhhHHHHHh
Q 019567 237 QAAWFSAVPWGTMAVSGYMAGKASDSLIKA 266 (339)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~ 266 (339)
+++....+..+.+++++++.|++.||++++
T Consensus 288 ~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~ 317 (438)
T TIGR00712 288 KSSWAYFLYEYAGIPGTLLCGWMSDKVFKG 317 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 999998889999999999999999999654
No 48
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.98 E-value=7.6e-30 Score=227.41 Aligned_cols=296 Identities=13% Similarity=0.058 Sum_probs=222.6
Q ss_pred CcchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhh-hhhcchhHHHHHHH
Q 019567 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPW-AATHSTASLLAVRA 80 (339)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~r~ 80 (339)
++++|.+++++|+|+.+.|++.+.+.+++.+++++.|++.||+|||+++..+.++++++.+++.. ...+|++.+++.|+
T Consensus 23 ~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~ 102 (410)
T TIGR00885 23 NPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLVGLF 102 (410)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHH
Confidence 57889999999999999999999999999999999999999999999999999999999888632 22468999999999
Q ss_pred HHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhh--------------------------h
Q 019567 81 FFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLS--------------------------T 134 (339)
Q Consensus 81 l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~--------------------------~ 134 (339)
+.|+|.|...+..+.++.+..|+++|++.+++.+...++|..++|.+++.+.. .
T Consensus 103 l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (410)
T TIGR00885 103 ILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDL 182 (410)
T ss_pred HHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999887742 2
Q ss_pred ccchHHHHHHHHHHHHHHHHHHhh-ccCCCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhH
Q 019567 135 IGISGPFILFSSLGLLWLSTWTSK-VTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNN 213 (339)
Q Consensus 135 ~~w~~~f~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (339)
.+||++|++.+++.++..+...+. .||.++ + ++ ++.....+.++++|+|+++...+..++..
T Consensus 183 ~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~--~---~~------------~~~~~~~~~~~~~~~~~~~~~~l~~f~yv 245 (410)
T TIGR00885 183 ASVQTPYMIIGAVVLAVALLIMLTKMPALNH--S---DA------------KQISFSASLSRLARIRHYREGVIAQFFYV 245 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc--c---cc------------ccccchhhHHHHHhChhHHHHHHHHHHHH
Confidence 469999999888777655444322 222111 0 00 00011124567889999998888888888
Q ss_pred HHHHHHHHhhhhhhhhhh-CCccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhh
Q 019567 214 WGYFVLLSWMPIYFNTVF-NVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCL 292 (339)
Q Consensus 214 ~~~~~~~~~~~~~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (339)
..+....++++.|.++.. +.+...++...........+++++++++.||+++| +.+..+.++..++.++.
T Consensus 246 g~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~---------~~l~i~~~~~~~~~ll~ 316 (410)
T TIGR00885 246 GVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAH---------KVLMAYAIIGMALCLGS 316 (410)
T ss_pred HHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH---------HHHHHHHHHHHHHHHHH
Confidence 888888899999997632 33444445555566677889999999999999765 34555555555555555
Q ss_pred hcccchhHHHHHHHHHHHHhhhcccchhhhhh
Q 019567 293 NYAKSPAVAAVLITIALSLSSFSQAGYLLNIQ 324 (339)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (339)
...++......+... ..+.+..++...+...
T Consensus 317 ~~~~~~~~~~~l~~~-glf~s~~fp~i~sl~~ 347 (410)
T TIGR00885 317 IFAGGHVGLYCLTLC-SAFMSLMFPTIYGIAL 347 (410)
T ss_pred HHcCChHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 555554433333333 3444444455555554
No 49
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.98 E-value=1.8e-30 Score=230.73 Aligned_cols=309 Identities=16% Similarity=0.117 Sum_probs=219.3
Q ss_pred chhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHH
Q 019567 4 AVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFG 83 (339)
Q Consensus 4 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G 83 (339)
..+.+.+|++.++.+.+++.+.+.+++.+.+++.|+++||+|||+++..+.++.+++++.+ ..+++. ++.|+++|
T Consensus 25 ~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~--~~~~~~---~~~r~l~G 99 (393)
T PRK11195 25 AAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLM--LFGIHP---LLAYGLVG 99 (393)
T ss_pred HHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHH--HHHHHH---HHHHHHHH
Confidence 3456788999999999999999999999999999999999999999999999999988887 334553 78899999
Q ss_pred hhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhccCCC
Q 019567 84 LAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDP 163 (339)
Q Consensus 84 ~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~ 163 (339)
++.+...|...+++.|++|+|+|++++++.+....+|..+||.+++.+.+. .|+..+.+.+...++. .+.....||++
T Consensus 100 ~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~~~-~~~~~~l~~~~ 177 (393)
T PRK11195 100 IGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP-HAEAALAVCALIYLLA-ALFNLFIPRLG 177 (393)
T ss_pred HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH-HHHHhcCCCCc
Confidence 999999999999999999999999999999999999999999999999885 4777777766544333 33445567655
Q ss_pred CCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccchhhHhhH
Q 019567 164 CNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSA 243 (339)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~ 243 (339)
++++..++++....+ +....++.++++|.+.......++............|.|+++.+|.++.+.|.+..
T Consensus 178 ~~~~~~~~~~~~~~~---------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~ 248 (393)
T PRK11195 178 ARRPGQSWNPIALLR---------DFFHACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALGITLNQPAYLQA 248 (393)
T ss_pred ccccccCCCHHHHHH---------HHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHH
Confidence 432211111100000 00112456778887766555544445555566677788888889999999999999
Q ss_pred HhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhcccchhHHHHHHHHHHHHhhhcccchhhhh
Q 019567 244 VPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNI 323 (339)
Q Consensus 244 ~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (339)
...++.+++++..+++.||.+++ .....+.. .+....++...++.+.......+.+...+.......+..
T Consensus 249 ~~~~g~i~g~~~~~~l~~~~~~~---------~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~~~~~~~ 318 (393)
T PRK11195 249 VVAIGIAVGAGAAARLVTLETVL---------RVLPAGIL-MGLVVLLMALQHSLLPAYPLLILIGALGGFFVVPMNALL 318 (393)
T ss_pred HHHHHHHHHHHHHHHHhcCCccc---------chHHHHHH-HHHHHHHHHHHhHHHHHHHHHHHHHHhhhhhhhhHHHHH
Confidence 99999999999999998876544 23333332 223333333333333333333333334444445555555
Q ss_pred h-hcccc--hhhhhhhhc
Q 019567 324 Q-IAQDF--STALQIQQE 338 (339)
Q Consensus 324 ~-~~p~~--~g~~~g~q~ 338 (339)
+ ..|++ +|.+.+..+
T Consensus 319 q~~~~~~~~~g~~~a~~~ 336 (393)
T PRK11195 319 QHRGHVLVGAGHSIAVQN 336 (393)
T ss_pred HhhCcccccchhHHHHHh
Confidence 6 66654 477765543
No 50
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.98 E-value=9.3e-31 Score=233.50 Aligned_cols=255 Identities=24% Similarity=0.327 Sum_probs=225.9
Q ss_pred hHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHhhhh
Q 019567 8 LAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEG 87 (339)
Q Consensus 8 i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~~ 87 (339)
+.+|.+....+.+.+.+++.+++++++++++.+.||++..+.+....+++++-.++. +..+|++.+++.|++.|+.++
T Consensus 72 ~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~--~~~~s~~~~ialr~llGl~es 149 (495)
T KOG2533|consen 72 LKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLT--AAVHSFPGLIALRFLLGLFES 149 (495)
T ss_pred CccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHH--HHHhhhHHHHHHHHHHHHHhc
Confidence 458889999999999999999999999999999999999999999999998888777 458999999999999999999
Q ss_pred cchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhh------hhccchHHHHHHHHHHHHHHHHHHhhccC
Q 019567 88 VAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIML------STIGISGPFILFSSLGLLWLSTWTSKVTN 161 (339)
Q Consensus 88 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~------~~~~w~~~f~~~~~~~~~~~~~~~~~~~~ 161 (339)
..+|....+++.||.+++|++.++++.+..++|.++|+.++..+. ...||||.|++.++++++..++.++++|+
T Consensus 150 ~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~ 229 (495)
T KOG2533|consen 150 GGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPD 229 (495)
T ss_pred ccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecC
Confidence 999999999999999999999999999999999999999998863 35689999999999999999999999999
Q ss_pred CCCCCCCCChHHHHHH----H-hCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccc
Q 019567 162 DPCNSPFVSKSELRLI----Q-AGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLK 236 (339)
Q Consensus 162 ~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~ 236 (339)
+|++.+..+++|+... + .+..+.+++.+...+++.+++|.+|...+..++.....+++.+|+|.|+++..|++..
T Consensus 230 ~P~~~~fl~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~ 309 (495)
T KOG2533|consen 230 NPSKAWFLTDEEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSEL 309 (495)
T ss_pred ChhhccccchHHHHHHHHHHHhccCCCcccccCHHHHHHHHhchhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChH
Confidence 9997766666654322 1 1111222224556788999999999999999999999999999999999996679999
Q ss_pred hhhHhhHHhHHHHHHHHhhhhhhhHHHH
Q 019567 237 QAAWFSAVPWGTMAVSGYMAGKASDSLI 264 (339)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~g~l~d~~~ 264 (339)
++..+.....++++++.++.|.++||.+
T Consensus 310 ~a~~ls~~~~~~g~v~~i~ag~lsdr~~ 337 (495)
T KOG2533|consen 310 QANLLSTPYDVGGIVGLILAGYLSDRLK 337 (495)
T ss_pred HhccccchHHhhhHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999963
No 51
>PRK09952 shikimate transporter; Provisional
Probab=99.98 E-value=9.8e-30 Score=229.25 Aligned_cols=244 Identities=16% Similarity=0.154 Sum_probs=180.5
Q ss_pred hHhHh--CCCccchhHHH-----HHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchh-------
Q 019567 8 LAAKF--GWSSSFLGIVQ-----SSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTA------- 73 (339)
Q Consensus 8 i~~~~--~~s~~~~g~~~-----s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~------- 73 (339)
+.+++ +.++. .++.. ++..++..+++++.|+++||+|||+++..+.++++++++++ ++++|+.
T Consensus 49 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 125 (438)
T PRK09952 49 FNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALI--GLLPSFSTIGWWAP 125 (438)
T ss_pred HHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHH--hcCCcHHHHHHHHH
Confidence 45555 66665 45554 34456677899999999999999999999999999999999 5588886
Q ss_pred -HHHHHHHHHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhh--------hhccchHHHHHH
Q 019567 74 -SLLAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIML--------STIGISGPFILF 144 (339)
Q Consensus 74 -~~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~--------~~~~w~~~f~~~ 144 (339)
.+++.|+++|++.|..++....++.|++|+|+|++..+..+.+..+|..+++.+...+. +.+|||++|++.
T Consensus 126 ~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~ 205 (438)
T PRK09952 126 VLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFS 205 (438)
T ss_pred HHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHH
Confidence 58899999999999999999999999999999999999999999999999887776654 257999999988
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHH-HHHhhHHHHHHHHHhh
Q 019567 145 SSLGLLWLSTWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVII-ANITNNWGYFVLLSWM 223 (339)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 223 (339)
+++.++. .......||+|++.+. ++ + .+ +++++....+.++++|+.+.... ..++.....+....|.
T Consensus 206 ~~~~l~~-~~l~~~~~es~~~~~~-----~~---~-~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (438)
T PRK09952 206 IVLVLIA-LWVRNGMEESAEFEQQ-----QH---E-QA--AAKKRIPVIEALLRHPGAFLKIIALRLCELLTMYIVTAFA 273 (438)
T ss_pred HHHHHHH-HHHHHhCCCChhHHHH-----Hh---h-cc--cccccCCHHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7665442 2222334444432110 00 0 00 00111122344667777766543 4555566777788999
Q ss_pred hhhhhhhhCCccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHh
Q 019567 224 PIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKA 266 (339)
Q Consensus 224 ~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~ 266 (339)
|.|+++.+|++...........++...++.++.|+++||++||
T Consensus 274 ~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr 316 (438)
T PRK09952 274 LNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRR 316 (438)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch
Confidence 9999888888877655555566677788889999999999876
No 52
>PRK15075 citrate-proton symporter; Provisional
Probab=99.98 E-value=7.1e-30 Score=230.18 Aligned_cols=247 Identities=14% Similarity=0.132 Sum_probs=182.8
Q ss_pred CcchhhhHhHhCCCccchhHHH-HHHH-----HHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchh--
Q 019567 2 SVAVVPLAAKFGWSSSFLGIVQ-SSFL-----WGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTA-- 73 (339)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~-s~~~-----~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~-- 73 (339)
++..|.+.+|++.++.+.+... +... ++..+++++.|+++||+|||+.++.+..+++++++++ ++++|++
T Consensus 35 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~--~~~~~~~~~ 112 (434)
T PRK15075 35 GFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSIMASGTLLI--AFVPGYATI 112 (434)
T ss_pred HHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHH--HhCCcHHHH
Confidence 4678999999999888865443 3222 2224688999999999999999999999999999999 5578876
Q ss_pred ------HHHHHHHHHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhh--------hhccchH
Q 019567 74 ------SLLAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIML--------STIGISG 139 (339)
Q Consensus 74 ------~~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~--------~~~~w~~ 139 (339)
.++++|+++|++.+...+....++.|++|+++|++++++.+.+.++|..+++.+++.+. +.+|||+
T Consensus 113 ~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~ 192 (434)
T PRK15075 113 GLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRI 192 (434)
T ss_pred HHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHH
Confidence 46899999999999999999999999999999999999999998888888888877653 5689999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHH-HHHHHhhHHHHHH
Q 019567 140 PFILFSSLGLLWLSTWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTV-IIANITNNWGYFV 218 (339)
Q Consensus 140 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 218 (339)
+|++..+...+ . + ..++.+++.+ +...+ + ++.+....+++..++++.+.. ....++....++.
T Consensus 193 ~f~~~~~~~~~-~---~-~~~~~~~e~~---~~~~~---~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (434)
T PRK15075 193 PFLIGCLIVPF-I---F-LIRRSLEETE---EFLAR---K-----HRPSMREIFRSLAANWRIVLAGMLMVAMTTVSFYL 256 (434)
T ss_pred HHHHHHHHHHH-H---H-HHHHhcCCCH---HHHHh---h-----hccccccHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 99975433211 1 1 1122221110 00000 0 001111224445555555443 3334445556777
Q ss_pred HHHhhhhhhhhhhCCccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHh
Q 019567 219 LLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKA 266 (339)
Q Consensus 219 ~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~ 266 (339)
...|.|.|+++.+|++..+.++......++++++.++.|+++||+++|
T Consensus 257 ~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r 304 (434)
T PRK15075 257 ITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRR 304 (434)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch
Confidence 889999999988899998888888888889999999999999999876
No 53
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.97 E-value=8.8e-30 Score=232.87 Aligned_cols=325 Identities=18% Similarity=0.218 Sum_probs=209.8
Q ss_pred CcchhhhHhHh--------CCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhh-----
Q 019567 2 SVAVVPLAAKF--------GWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAA----- 68 (339)
Q Consensus 2 ~~~~~~i~~~~--------~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~----- 68 (339)
++..|.+++++ +.++.+.++..+.+.++..+++++.|+++||+|||+++..+.+++.++.+.+++..
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~ 111 (479)
T PRK10077 32 SGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTS 111 (479)
T ss_pred hHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 34567777777 88899999999999999999999999999999999999999999999888774310
Q ss_pred -----hcchhHHHHHHHHHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhh--------hhc
Q 019567 69 -----THSTASLLAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIML--------STI 135 (339)
Q Consensus 69 -----~~~~~~~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~--------~~~ 135 (339)
.+++..++++|+++|++.|...+...++++|++|+|+|++++++.+.+..+|..+++.++..+. +..
T Consensus 112 ~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~ 191 (479)
T PRK10077 112 IGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTD 191 (479)
T ss_pred ccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccC
Confidence 1225678899999999999999999999999999999999999999999999999988776553 357
Q ss_pred cchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChHHH-H-HHHhCCccccccCCCccHHHHhc-----chhHHH----
Q 019567 136 GISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVSKSEL-R-LIQAGKSDSVKKRNPPSLRHLLS-----KLPSWT---- 204 (339)
Q Consensus 136 ~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~---- 204 (339)
|||+.|++.++..++..+. .++.||+|++...+++.++ + ..++....++.++...+.++.++ .+..+.
T Consensus 192 gWr~~f~~~~~~~~~~~~~-~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (479)
T PRK10077 192 GWRYMFASEAIPALLFLML-LYFVPETPRYLMSRGKQEQAEGILRKIMGNTLATQALQEIKHSLDHGRKTGGKLLMFGVG 270 (479)
T ss_pred ChHHHHHHHHHHHHHHHHH-HHcCCCCcHHHHHcCCHHHHHHHHHHHcCChhHHHHHHHHHHHHHHhhhhhhhhcchhHH
Confidence 9999999988777765544 5567888754211111111 1 00000000000000001111111 011100
Q ss_pred -H----HHHHHhhHHHHHHHHHhhhhhhhhhhCCccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHH
Q 019567 205 -V----IIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQS 279 (339)
Q Consensus 205 -~----~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 279 (339)
. ....+.....++...++.|.+.++ .|.+...........++...++.++.+++.||+++| .++.
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~-~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r---------~~~i 340 (479)
T PRK10077 271 VIVIGVMLSVFQQFVGINVVLYYAPEIFKT-LGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRK---------PLQI 340 (479)
T ss_pred HHHHHHHHHHHHHHhChhHHHHHHHHHHHH-cCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCh---------HHHH
Confidence 0 111111222233445566777666 688877777777778888899999999999999875 4555
Q ss_pred HHhhhhhhHhhhhhcc---cchh-HHHHHHHHHHHHhhhc-ccchhhhhh--hcccchhhhhhhh
Q 019567 280 IGFIGPGVSLLCLNYA---KSPA-VAAVLITIALSLSSFS-QAGYLLNIQ--IAQDFSTALQIQQ 337 (339)
Q Consensus 280 ~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~--~~p~~~g~~~g~q 337 (339)
.+.++.+++..++... +... ......+...+..+.. .+....... ..++++++.+|..
T Consensus 341 ~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~ 405 (479)
T PRK10077 341 IGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIA 405 (479)
T ss_pred HhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHH
Confidence 6666666655554322 1111 1111222222222221 233344444 4447788887753
No 54
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.97 E-value=2.5e-29 Score=223.99 Aligned_cols=302 Identities=14% Similarity=0.120 Sum_probs=220.7
Q ss_pred hhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHhh
Q 019567 6 VPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLA 85 (339)
Q Consensus 6 ~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g 85 (339)
+.+++++|.|+.+.|+..+.+.+...+.+++.|+++||+|||+++..+.++..++.+.+ ..+++++.+++.|+++|++
T Consensus 35 ~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~--~~~~~~~~l~~~~~l~g~~ 112 (400)
T PRK11646 35 IRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATM--AIAHEPWLLWLSCILSGLG 112 (400)
T ss_pred HHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHH--HHhccHHHHHHHHHHHHHH
Confidence 34688999999999999999999999999999999999999999999999999999998 5578999999999999999
Q ss_pred hhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhccCCCCC
Q 019567 86 EGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCN 165 (339)
Q Consensus 86 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 165 (339)
.+...+...+++.|++|+|+|++++++.+...++|..+||++++++. .++||+.|++.++..++..+......||.+++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~~ 191 (400)
T PRK11646 113 GTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLPAYKLS 191 (400)
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCCccccc
Confidence 99888999999999999999999999999999999999999999998 68999999998887776655555555543211
Q ss_pred CCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccchhhHhhHHh
Q 019567 166 SPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVP 245 (339)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~ 245 (339)
+. + ++...++++.+++|+++...+..+...........++|.|+++..+ ++.+.+.+....
T Consensus 192 ~~---~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~g~l~~~~ 252 (400)
T PRK11646 192 TV---R---------------TPVREGMTRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDIAG-SPSAVKWMYAIE 252 (400)
T ss_pred cc---c---------------hhhHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhhcC-CchHHHHHHHHH
Confidence 00 0 0011246778888888766655555444444456788999988644 677888887777
Q ss_pred HHHHHHHHhhhhhhhHH-HHHhccchHHHHHHHHHHHhhhhhhHhhhhhcccchhHHHHHHHHHHHHhhhcccchhhhhh
Q 019567 246 WGTMAVSGYMAGKASDS-LIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQ 324 (339)
Q Consensus 246 ~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (339)
.+....+....+++.|| .+.+ .....+..+.++...++...++.+.......+.....+...+.......
T Consensus 253 ~~~~~~~~~~~~~~~~~r~~~~---------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~g~~~~~p~~~~~~~ 323 (400)
T PRK11646 253 ACLSLTLLYPIARWSEKRFRLE---------HRLMAGLLIMSLSMFPIGMVSNLQQLFTLICLFYIGSIIAEPARETLSA 323 (400)
T ss_pred HHHHHHHHHHHHHHHHHhcchh---------HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHccHHHHHH
Confidence 77666655555666654 3322 2234455555555555555554443333222222333333344444444
Q ss_pred --hcccchhhhhhhhc
Q 019567 325 --IAQDFSTALQIQQE 338 (339)
Q Consensus 325 --~~p~~~g~~~g~q~ 338 (339)
..++++|+.+|.++
T Consensus 324 ~~~p~~~~g~~~g~~~ 339 (400)
T PRK11646 324 SLADARARGSYMGFSR 339 (400)
T ss_pred hcCCcccchhhhhHHH
Confidence 55688898887653
No 55
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.97 E-value=3.1e-29 Score=220.51 Aligned_cols=312 Identities=11% Similarity=0.054 Sum_probs=223.6
Q ss_pred CcchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhh-----cchHH-HHHHHHHHHHHHHHHhhhh-hcchhH
Q 019567 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKY-----GGKKV-LAWGVALWSLSTLLTPWAA-THSTAS 74 (339)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~-----G~r~~-l~~~~~~~~~~~~~~~~~~-~~~~~~ 74 (339)
++.+|.+.+|+|+|.+++|+.... .+...+ .+++|+++||+ ||||. ++.+.++.++.....++.. ..+.+.
T Consensus 8 ~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~ 85 (356)
T TIGR00901 8 GNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPL 85 (356)
T ss_pred HhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHH
Confidence 467899999999999999999766 555555 99999999998 89887 4667777777766663311 145566
Q ss_pred HHHHHHHHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhcc--------chHHHHHHHH
Q 019567 75 LLAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIG--------ISGPFILFSS 146 (339)
Q Consensus 75 ~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~--------w~~~f~~~~~ 146 (339)
+....++.+++.+...+...+++.|++|+|+|+++.++...+..+|.++++.+++.+.++.+ ||..|++.++
T Consensus 86 l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai 165 (356)
T TIGR00901 86 LAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTAL 165 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHH
Confidence 77778888888888899999999999999999999999999999999999999999988888 9999999888
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchh---HHHHHHHHHhhHHHHHHHHHhh
Q 019567 147 LGLLWLSTWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLP---SWTVIIANITNNWGYFVLLSWM 223 (339)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 223 (339)
..++..+..++..||++++++. +++++ ++...++++++++|. ++...+..++....++....+.
T Consensus 166 ~~l~~~~~~~~~~~e~~~~~~~-~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (356)
T TIGR00901 166 LILPGLLVTLFLAKEPQEDASV-PKPLT------------QAVLKPIREFFQRKNMIQALLLLLLIVLYKLGDSAATVLT 232 (356)
T ss_pred HHHHHHHHHHHhccCCCccccc-chhHH------------HHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7776555545445654332111 11110 001124567777765 6666667777777888888999
Q ss_pred hhhhhhhhCCccchhhHhhHHhH-HHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhcc-------
Q 019567 224 PIYFNTVFNVNLKQAAWFSAVPW-GTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYA------- 295 (339)
Q Consensus 224 ~~~l~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 295 (339)
|.|+++ +|+++++.+......+ +..+++.+++|++.||+++| +.+..+.++.++...++...
T Consensus 233 ~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~---------~~l~~~~~~~~~~~~~~~~~~~~~~~~ 302 (356)
T TIGR00901 233 TLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNIL---------YALLLFGIVQALTNAGFVWLASNGHHD 302 (356)
T ss_pred HHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHH---------HHHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 999998 7999999988877666 56788999999999999976 22334444444444433221
Q ss_pred ----cchhHHHHHHHHHHHHhhhcccchhhhhh--hcccchhhhhhhhc
Q 019567 296 ----KSPAVAAVLITIALSLSSFSQAGYLLNIQ--IAQDFSTALQIQQE 338 (339)
Q Consensus 296 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~~g~~~g~q~ 338 (339)
++.+.......+..+..+...+....... ..|+++|+.+|.++
T Consensus 303 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~ 351 (356)
T TIGR00901 303 GITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLS 351 (356)
T ss_pred ccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHH
Confidence 12232333333334444555566666666 56688899888653
No 56
>TIGR00898 2A0119 cation transport protein.
Probab=99.97 E-value=4.7e-30 Score=236.11 Aligned_cols=315 Identities=15% Similarity=0.094 Sum_probs=221.1
Q ss_pred cchhhhHhHhCCC---ccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHH
Q 019567 3 VAVVPLAAKFGWS---SSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVR 79 (339)
Q Consensus 3 ~~~~~i~~~~~~s---~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 79 (339)
+..|.+.+|+|++ +.+.++..+++.++..+++++.|+++||+|||+++.++.++.+++.+++ ++++|++.+++.|
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~r 187 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLT--AFSPNYTVFLVFR 187 (505)
T ss_pred cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHH--HHcccHHHHHHHH
Confidence 5678899999999 8999999999999999999999999999999999999999999999998 5689999999999
Q ss_pred HHHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhc
Q 019567 80 AFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKV 159 (339)
Q Consensus 80 ~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~ 159 (339)
++.|++.+...+....++.|++|+++|+++.++...+..+|.++++.++..+.+ ||+.|++.+++.++..+.. ++.
T Consensus 188 ~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~~~-~~~ 263 (505)
T TIGR00898 188 LLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFLLS-WFV 263 (505)
T ss_pred HHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHH-Hhc
Confidence 999999999999999999999999999999999999999999999998877654 9999999988877766555 567
Q ss_pred cCCCCCCCCCChHHH--HHH----HhC-------------CccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHH
Q 019567 160 TNDPCNSPFVSKSEL--RLI----QAG-------------KSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLL 220 (339)
Q Consensus 160 ~~~~~~~~~~~~~~~--~~~----~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (339)
||+|++...+.+.++ +.. +.+ +++++++.++.++++++++|+++...+......+......
T Consensus 264 ~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 343 (505)
T TIGR00898 264 PESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSY 343 (505)
T ss_pred CCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHH
Confidence 888864221111110 000 000 0000111123467889999988776665554444333333
Q ss_pred HhhhhhhhhhhCCccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhcccch--
Q 019567 221 SWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSP-- 298 (339)
Q Consensus 221 ~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 298 (339)
..++.+..+ .+.+.. ......++..+++.++.+++.||++|| ..+..+.++.+++.+++...++.
T Consensus 344 ~~~~~~~~~-~~~~~~---~~~~~~~~~~i~~~~~~~~l~dr~grr---------~~~~~~~~~~~~~~l~~~~~~~~~~ 410 (505)
T TIGR00898 344 YGLVLDLGN-LGGNIY---LDLFISGLVELPAKLITLLLIDRLGRR---------YTMAASLLLAGVALLLLLFVPVDLY 410 (505)
T ss_pred HHHhccccc-cCCChH---HHHHHHHHHHHHHHHHHHHHHHHhCCH---------HHHHHHHHHHHHHHHHHHHcCCCch
Confidence 333333333 344432 233345667788999999999999875 45556666666665555554433
Q ss_pred hHHHHHHHHHHHHhhhcccchhhhhh-hcc-cchhhhhhh
Q 019567 299 AVAAVLITIALSLSSFSQAGYLLNIQ-IAQ-DFSTALQIQ 336 (339)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p-~~~g~~~g~ 336 (339)
+.......+..+..+........... ..| +.++...|.
T Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~ 450 (505)
T TIGR00898 411 FLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGV 450 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhH
Confidence 33333333333333333344444444 444 566766654
No 57
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.97 E-value=5.3e-29 Score=220.91 Aligned_cols=240 Identities=15% Similarity=0.133 Sum_probs=190.4
Q ss_pred CcchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHH
Q 019567 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (339)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l 81 (339)
++.+|.+.+|+|.|+.+.|++.+.+.++..+++++.|+++||+|||+++..+.++.+++.+.+ ..++|++.+++.|++
T Consensus 26 ~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~l 103 (381)
T PRK03633 26 NTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGL--GLMVGFWSWLAWRFV 103 (381)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhccHHHHHHHHHH
Confidence 467899999999999999999999999999999999999999999999999999999999988 558999999999999
Q ss_pred HHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhccC
Q 019567 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTN 161 (339)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~ 161 (339)
+|++.+...+...+.+.+..++++|+++++.+..+.++|..+||.+++.+.+...|...+.. +..........+ .+.
T Consensus 104 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~--~~~ 180 (381)
T PRK03633 104 AGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLPWVT-GLVLAAILPLLF--TRI 180 (381)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHHHHH-HHHHHHHHHHHH--hcc
Confidence 99999998888888888999999999999999999999999999999998776444443332 222211111111 121
Q ss_pred CCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccchhhHh
Q 019567 162 DPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWF 241 (339)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~ 241 (339)
++++++ + ++..+.++.+|+|.++......+.....+.....++|.|+++ .|.++.+.+.+
T Consensus 181 ~~~~~~-----------------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~s~~~~g~~ 240 (381)
T PRK03633 181 LNQQAE-----------------N--HDSTSIWPMLKLRQARLGVNGCIISGIVLGSLYGLMPLYLNH-QGMSDASIGFW 240 (381)
T ss_pred cCCCCC-----------------C--CCCCCHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHH
Confidence 111100 0 011245677888887765544444445556667789999987 59999899998
Q ss_pred hHHhHHHHHHHHhhhhhhhHHHHHh
Q 019567 242 SAVPWGTMAVSGYMAGKASDSLIKA 266 (339)
Q Consensus 242 ~~~~~~~~~~~~~~~g~l~d~~~~~ 266 (339)
.+...++.+++++..|++.||+++|
T Consensus 241 ~~~~~~~~~~~~~~~g~l~dr~~~~ 265 (381)
T PRK03633 241 MALLVSAGILGQWPIGRLADRFGRL 265 (381)
T ss_pred HHHHHHHHHHHHhhhHHHHHHcCcH
Confidence 8888899999999999999999875
No 58
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.97 E-value=1.3e-30 Score=242.62 Aligned_cols=265 Identities=16% Similarity=0.214 Sum_probs=211.8
Q ss_pred CcchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhh-------------
Q 019567 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAA------------- 68 (339)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~------------- 68 (339)
++.++.++++|++++++.|++.+.+.+++.++.++.+++.||+|||+++.++.++++++++++++..
T Consensus 53 ~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~ 132 (633)
T TIGR00805 53 NSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVS 132 (633)
T ss_pred HhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCcccccccc
Confidence 5678999999999999999999999999999999999999999999999999999999999985431
Q ss_pred ------------------------------------hcchhHHHHHHHHHHhhhhcchhhhHHHHhhhCCcchhhHHHHH
Q 019567 69 ------------------------------------THSTASLLAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGI 112 (339)
Q Consensus 69 ------------------------------------~~~~~~~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~ 112 (339)
...+..++++|+++|+|.+..++...+++.|++|+++|++++++
T Consensus 133 ~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i 212 (633)
T TIGR00805 133 STGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGI 212 (633)
T ss_pred ccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHH
Confidence 00245678999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhHHHHhhhhc----------------------cchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCC
Q 019567 113 CMGGFHLGNVVGLLLTPIMLSTI----------------------GISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVS 170 (339)
Q Consensus 113 ~~~~~~~g~~~~~~l~~~l~~~~----------------------~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (339)
+.....+|..+|+++++++.+.+ +|+..|++.+++.++..+..+.+.++.|++.++.+
T Consensus 213 ~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p~~lp~~~~~~~ 292 (633)
T TIGR00805 213 LESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFFPKALPKEGKRVN 292 (633)
T ss_pred HHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCcccccc
Confidence 99999999999999999887643 27778988888887766655544333333211111
Q ss_pred -h-HHHHHHHhCCccc------cccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccchhhHhh
Q 019567 171 -K-SELRLIQAGKSDS------VKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFS 242 (339)
Q Consensus 171 -~-~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~ 242 (339)
+ ++.+..++..+++ ..++....++++++||.++...+..++.....+++.+|+|.|+++++|+++.+++.+.
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~ 372 (633)
T TIGR00805 293 VDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLI 372 (633)
T ss_pred hhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHh
Confidence 1 1100000000000 0011123467899999999999999999999999999999999999999999999998
Q ss_pred HHhHH-HHHHHHhhhhhhhHHHHHh
Q 019567 243 AVPWG-TMAVSGYMAGKASDSLIKA 266 (339)
Q Consensus 243 ~~~~~-~~~~~~~~~g~l~d~~~~~ 266 (339)
....+ +.+++.+++|++.||++.+
T Consensus 373 ~~~~i~~~~vG~~l~G~l~~r~~~~ 397 (633)
T TIGR00805 373 GVVNLPAAGLGYLIGGFIMKKFKLN 397 (633)
T ss_pred hhhhhhHHHHHHhhhhheeeeeccc
Confidence 87776 5678999999999998754
No 59
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.97 E-value=1.7e-28 Score=215.08 Aligned_cols=285 Identities=28% Similarity=0.417 Sum_probs=242.0
Q ss_pred CcchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHH
Q 019567 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (339)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l 81 (339)
++..|.+.+++|.++.+.++..+.+.++..++.++.|+++||+|||+.+..+..+..++.+.. ...++++.+++.|++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l 96 (352)
T cd06174 19 SPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLL--AFASSLWLLLVGRFL 96 (352)
T ss_pred HhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHH--HHhccHHHHHHHHHH
Confidence 456788999999999999999999999999999999999999999999999999999999998 557999999999999
Q ss_pred HHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhccC
Q 019567 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTN 161 (339)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~ 161 (339)
.|++.+...+...+++.|++|+|+|++.+++.+....+|..++|.+++.+.+..+||+.+++.++..++..+...+..
T Consensus 97 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 174 (352)
T cd06174 97 LGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFLL-- 174 (352)
T ss_pred HHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 999999999999999999999999999999999999999999999999999999999999998888777665544331
Q ss_pred CCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccchhhHh
Q 019567 162 DPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWF 241 (339)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~ 241 (339)
|+++...+..++..........+.|.+.++.+|.+..+.+..
T Consensus 175 --------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (352)
T cd06174 175 --------------------------------------RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLL 216 (352)
T ss_pred --------------------------------------HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHH
Confidence 557777788888888888999999999999779999999999
Q ss_pred hHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHH-HHHHHhhhhhhHhhhhhcccchhHHHHHHHHHHHHhhhcccchh
Q 019567 242 SAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKI-MQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYL 320 (339)
Q Consensus 242 ~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (339)
.....++..++.++.+++.||+++| . .+..+..+..++.......++.+.......+.....+...+...
T Consensus 217 ~~~~~~~~~i~~~~~~~~~~~~~~~---------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 287 (352)
T cd06174 217 LSLFGLGGILGALLGGLLSDRLGRR---------RLLLLIGLLLAALGLLLLALAPSLALLLVALLLLGFGLGFAFPALL 287 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh---------hHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhccchhHH
Confidence 9999999999999999999999876 3 56667777777777776666555544444444455555555555
Q ss_pred hhhh-h-cccchhhhhhhh
Q 019567 321 LNIQ-I-AQDFSTALQIQQ 337 (339)
Q Consensus 321 ~~~~-~-~p~~~g~~~g~q 337 (339)
.... . .++++++.++..
T Consensus 288 ~~~~~~~~~~~~~~~~~~~ 306 (352)
T cd06174 288 TLASELAPPEARGTASGLF 306 (352)
T ss_pred HHHHhhcCHHHHHHHHHHH
Confidence 5555 4 448888877754
No 60
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.97 E-value=1e-28 Score=220.57 Aligned_cols=299 Identities=18% Similarity=0.117 Sum_probs=206.8
Q ss_pred cchhh-hHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhh-hh-----cchhHH
Q 019567 3 VAVVP-LAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWA-AT-----HSTASL 75 (339)
Q Consensus 3 ~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~-~~-----~~~~~~ 75 (339)
+.+|. +++++|.|+.+.|++.+.+.+++.+++++.|+++||+|||+++..+.++.+++.+.+.+. .. .+++.+
T Consensus 36 ~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 115 (399)
T PRK05122 36 AVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLL 115 (399)
T ss_pred HHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHH
Confidence 45565 678999999999999999999999999999999999999999999999888877665321 12 256788
Q ss_pred HHHHHHHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHH
Q 019567 76 LAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTW 155 (339)
Q Consensus 76 ~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~ 155 (339)
++.|+++|++.+...+....++.|++|+|+|++++++.+....+|..+++.+++.+.++.|||..+++..+..++.....
T Consensus 116 ~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~ 195 (399)
T PRK05122 116 LLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGLLLA 195 (399)
T ss_pred HHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999887666554332221
Q ss_pred HhhccCCCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCcc
Q 019567 156 TSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNL 235 (339)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ 235 (339)
...|+++++ .+ + +.++++.++ +++.......+....+.....++|.|+++ .|.
T Consensus 196 -~~~~~~~~~---~~--------------~----~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-- 248 (399)
T PRK05122 196 -RPRPAVPPV---KG--------------E----RLPFRRVLG--RVWPYGMGLALASIGFGTIATFITLYYAA-RGW-- 248 (399)
T ss_pred -hcCCCCCCC---Cc--------------c----chhHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccc--
Confidence 111221110 00 0 012233332 22222223333444555666788888876 465
Q ss_pred chhhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhcccchhHHHHHHHHHHHHhhhc
Q 019567 236 KQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFS 315 (339)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (339)
.+.+.......++.++++++.|++.||+++| +....+..+.+++..++...++.+.......+.....+..
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~ 319 (399)
T PRK05122 249 DGAALALTLFGVAFVGARLLFGNLINRLGGL---------RVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLV 319 (399)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHhccH---------HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHH
Confidence 3456666777888889999999999998865 3444555555555555555555443333222222223333
Q ss_pred ccchhhhhh--hcccchhhhhhhh
Q 019567 316 QAGYLLNIQ--IAQDFSTALQIQQ 337 (339)
Q Consensus 316 ~~~~~~~~~--~~p~~~g~~~g~q 337 (339)
.+....... ..++++|+.++..
T Consensus 320 ~~~~~~~~~~~~~~~~~g~~~g~~ 343 (399)
T PRK05122 320 FPALGVEAVKRVPPQNRGAALGAY 343 (399)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHH
Confidence 333223233 5567788877653
No 61
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.97 E-value=2.1e-28 Score=219.27 Aligned_cols=308 Identities=14% Similarity=0.118 Sum_probs=216.4
Q ss_pred CcchhhhHhHhCCCccc-----hhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHH
Q 019567 2 SVAVVPLAAKFGWSSSF-----LGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLL 76 (339)
Q Consensus 2 ~~~~~~i~~~~~~s~~~-----~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (339)
.+.+|.+.+|+|.+..+ .+++.+.+.++..+++++.|+++||+|||+++..+.++.+++.+++ ..++|++.++
T Consensus 34 ~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 111 (408)
T PRK09874 34 MPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLM--GLAQNIWQFL 111 (408)
T ss_pred hhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHH--HHHhhHHHHH
Confidence 46788999999998765 4889999999999999999999999999999999999999988888 5588999999
Q ss_pred HHHHHHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHH
Q 019567 77 AVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWT 156 (339)
Q Consensus 77 ~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~ 156 (339)
+.|++.|++.+ ..+....++.|++|+++|++++++......+|..++|.+++.+.+..+||+.|++.++..++..+..+
T Consensus 112 ~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (408)
T PRK09874 112 ILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTL 190 (408)
T ss_pred HHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999865 56778889999999999999999999999999999999999999999999999999888777666666
Q ss_pred hhccCCCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHH-HHHHhhHHHHHHHHHhhhhhhhhhhCCcc
Q 019567 157 SKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVI-IANITNNWGYFVLLSWMPIYFNTVFNVNL 235 (339)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ 235 (339)
+..||++++.++.++.+ ..+..+.+++|+++... ...+...........+++.|..+..+...
T Consensus 191 ~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (408)
T PRK09874 191 FCIRENFQPVSKKEMLH----------------MREVVTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVS 254 (408)
T ss_pred HHhccCcccccchhhhH----------------HHHHHHhCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch
Confidence 66666543221110000 01123445666665433 33333344444556778888877533222
Q ss_pred c---hhhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhcccchhHHHHHHHHHHHHh
Q 019567 236 K---QAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLS 312 (339)
Q Consensus 236 ~---~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (339)
+ ..+.+..+.+++.+++.+..|++.||+++| ..+..+.....+..+.....++.+.......+.....
T Consensus 255 ~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 325 (408)
T PRK09874 255 NIAFISGMIASVPGVAALLSAPRLGKLGDRIGPE---------KILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAAD 325 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc---------hhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhh
Confidence 1 234555566777888889999999999876 3334444455554444444444443333333333333
Q ss_pred hhcccchhhhhh--hcccchhhhhhhh
Q 019567 313 SFSQAGYLLNIQ--IAQDFSTALQIQQ 337 (339)
Q Consensus 313 ~~~~~~~~~~~~--~~p~~~g~~~g~q 337 (339)
+...+....... ..++++|..++.+
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~g~~~~~~ 352 (408)
T PRK09874 326 GALLPAVQTLLVYNSSNQIAGRIFSYN 352 (408)
T ss_pred HhhHHHHHHHHHHhCCcccceeeehHH
Confidence 333344444444 4456677776643
No 62
>PRK12382 putative transporter; Provisional
Probab=99.97 E-value=1.7e-28 Score=218.65 Aligned_cols=299 Identities=16% Similarity=0.168 Sum_probs=202.3
Q ss_pred cchhh-hHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhh------hhcchhHH
Q 019567 3 VAVVP-LAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWA------ATHSTASL 75 (339)
Q Consensus 3 ~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~------~~~~~~~~ 75 (339)
|.+|. +++|+|.|+++.|++.+.+.+++.+++++.|+++||+||||++..+.+...++.+...+. ..+|++.+
T Consensus 36 p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 115 (392)
T PRK12382 36 PVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALL 115 (392)
T ss_pred hhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHH
Confidence 45564 688999999999999999999999999999999999999999999988777665432111 13578899
Q ss_pred HHHHHHHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHH
Q 019567 76 LAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTW 155 (339)
Q Consensus 76 ~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~ 155 (339)
++.|+++|++.+...+...+++.|++|+|+|++++++.+.+...|..++|++++.+.+.+|||+.+.+..+..++....
T Consensus 116 ~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~- 194 (392)
T PRK12382 116 VVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLAWAF- 194 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHH-
Confidence 9999999999999889999999999999999999999999999999999999999999999998877655443332221
Q ss_pred HhhccCCCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCcc
Q 019567 156 TSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNL 235 (339)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ 235 (339)
....||.+++++ + +.+.++..+ .++...+..++..........+.|.|+++ .|++
T Consensus 195 ~~~~~~~~~~~~-----------------~----~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~- 249 (392)
T PRK12382 195 NGTVRKVPAHAG-----------------E----RPSLWSVVG--LIWKPGLGLALQGVGFAVIGTFVSLYFAS-KGWA- 249 (392)
T ss_pred HHhccCCCCCcc-----------------c----CchHHHHHH--HHHHhHHHHHHHHHHHhHHHHHHHHHHHh-cCCc-
Confidence 111122111100 0 001222221 12222222233334455566788888877 4654
Q ss_pred chhhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhcccchhHHHHHHHHHHHHhhhc
Q 019567 236 KQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFS 315 (339)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (339)
+.+.......++.++++++.|++.||+++| +.+..+..+..++..++...++.+.......+.....+..
T Consensus 250 -~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~ 319 (392)
T PRK12382 250 -MAGFTLTAFGGAFVLMRVLFGWMPDRFGGV---------KVAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLI 319 (392)
T ss_pred -hhHHHHHHHHHHHHHHHHHHHHHHHhcCCC---------eehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhH
Confidence 345556667777888999999999999876 2333444555555555555555443333333333333333
Q ss_pred ccchhhhhh--hcccchhhhhhhh
Q 019567 316 QAGYLLNIQ--IAQDFSTALQIQQ 337 (339)
Q Consensus 316 ~~~~~~~~~--~~p~~~g~~~g~q 337 (339)
.+....... ..|+++|+..|..
T Consensus 320 ~~~~~~~~~~~~~~~~~g~~~g~~ 343 (392)
T PRK12382 320 FPALGVEVVKRVPSQVRGTALGGY 343 (392)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHH
Confidence 333333333 5668888888764
No 63
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.97 E-value=5.6e-29 Score=227.23 Aligned_cols=263 Identities=20% Similarity=0.180 Sum_probs=190.0
Q ss_pred CcchhhhHhHhCCC--------ccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhh-hhcch
Q 019567 2 SVAVVPLAAKFGWS--------SSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWA-ATHST 72 (339)
Q Consensus 2 ~~~~~~i~~~~~~s--------~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~-~~~~~ 72 (339)
++..|.+.++++.+ ..+.+++.+.+.++..+++++.|+++||+|||+++..+.++..++.+++.+. ...++
T Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (481)
T TIGR00879 48 GGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSV 127 (481)
T ss_pred hhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccch
Confidence 45677788888777 7899999999999999999999999999999999999999999999888331 12345
Q ss_pred hHHHHHHHHHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHH---HHhhhhccchHHHHHHHHHHH
Q 019567 73 ASLLAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLT---PIMLSTIGISGPFILFSSLGL 149 (339)
Q Consensus 73 ~~~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~---~~l~~~~~w~~~f~~~~~~~~ 149 (339)
+.+++.|+++|++.+...+....++.|++|+++|++++++.+.+..+|..+++.++ ....+..+||+.|++.++..+
T Consensus 128 ~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~ 207 (481)
T TIGR00879 128 EMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAG 207 (481)
T ss_pred HHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999998 666677899999999665554
Q ss_pred HHHHHHHhhccCCCCCCC--CCChHHHHHHHh---CCccc----------------cccCCCccHHHHhcc------hhH
Q 019567 150 LWLSTWTSKVTNDPCNSP--FVSKSELRLIQA---GKSDS----------------VKKRNPPSLRHLLSK------LPS 202 (339)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~---~~~~~----------------~~~~~~~~~~~~~~~------~~~ 202 (339)
+. +...++.||+|+... ...++..+...+ ..+++ +.+..+..+++.++. +.+
T Consensus 208 ~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (481)
T TIGR00879 208 LL-FLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLF 286 (481)
T ss_pred HH-HHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHHHHhcCchhHHHHH
Confidence 44 344455677664211 111110100000 00000 000011113333332 222
Q ss_pred HHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHh
Q 019567 203 WTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKA 266 (339)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~ 266 (339)
+...+..+...........+.|.++++ .|++..+.+.......++.+++.++.+++.||+++|
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~ 349 (481)
T TIGR00879 287 LGVVLQWFQQFTGINAIMYYSPTIFEN-AGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRR 349 (481)
T ss_pred HHHHHHHHHHHhCCeehHHHHHHHHHH-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcch
Confidence 333333333333344456677777665 699988888888888999999999999999999876
No 64
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.97 E-value=5.3e-28 Score=215.31 Aligned_cols=299 Identities=15% Similarity=0.087 Sum_probs=198.1
Q ss_pred hhHhHhCCCccchhHHHHHHHH-HHHHHHhhhHHHhhhhcchHHH-HHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHh
Q 019567 7 PLAAKFGWSSSFLGIVQSSFLW-GYIFSSVIGGALVDKYGGKKVL-AWGVALWSLSTLLTPWAATHSTASLLAVRAFFGL 84 (339)
Q Consensus 7 ~i~~~~~~s~~~~g~~~s~~~~-~~~i~~~~~g~l~dr~G~r~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~ 84 (339)
.+.+|+|.|++++|++.+...+ ++.+++++.++ +||+||||.+ ..+.+..+++..+. +.+++++.+++.+.+.|.
T Consensus 41 ~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~ 117 (393)
T PRK15011 41 FLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLF--AWNRNYFVLLFVGVFLSS 117 (393)
T ss_pred HHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHH--HHhhHHHHHHHHHHHHHH
Confidence 3678999999999999876655 55556655555 9999999875 45566666777766 557889887666555444
Q ss_pred hhhcchhhhHHHHhhhCCcchh--hHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhccCC
Q 019567 85 AEGVAMPAMSTLTSRWFPSHER--ASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTND 162 (339)
Q Consensus 85 g~~~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~ 162 (339)
..+...|....++.|+.++++| +...++.+.+.++|.+++|++++.+.+++|||..|++.++..++..+..+...||.
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~ 197 (393)
T PRK15011 118 FGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSM 197 (393)
T ss_pred HHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcCcc
Confidence 4456778888888888766555 34568889999999999999999999999999999999988887777777777776
Q ss_pred CCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcc-hhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccchhhHh
Q 019567 163 PCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSK-LPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWF 241 (339)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~ 241 (339)
+++++..++ + . + ..+ ++ +..+......+.....+.....+.|.|+++.+|+++.+.+.+
T Consensus 198 ~~~~~~~~~-~-----------~-~----~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~ 257 (393)
T PRK15011 198 RKELPLATG-T-----------L-E----APR---RNRRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVM 257 (393)
T ss_pred CCCCccccc-c-----------c-c----ccc---cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 543321100 0 0 0 000 11 222333333344444555566789999988889999999988
Q ss_pred hHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhcccchhHHHHHHHHHHHHhhhcccchhh
Q 019567 242 SAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLL 321 (339)
Q Consensus 242 ~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (339)
.....+..+++.++.|+++||+++| +....+.....+........++.+.......+.....+...+....
T Consensus 258 ~~~~~~~~i~~~~~~G~l~dr~g~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~~~~~~~~ 328 (393)
T PRK15011 258 MGTAAGLEIPTMLIAGYFAKRLGKR---------FLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGILGGIGML 328 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhChH---------HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8777778888999999999999876 2223333333333333333333333332222232333333333334
Q ss_pred hhh-hcccchhhhhhhh
Q 019567 322 NIQ-IAQDFSTALQIQQ 337 (339)
Q Consensus 322 ~~~-~~p~~~g~~~g~q 337 (339)
... ..|+++|..++..
T Consensus 329 ~~~~~~p~~~g~~~~~~ 345 (393)
T PRK15011 329 YFQDLMPGQAGSATTLY 345 (393)
T ss_pred HHHHhCCCCcchHHHHH
Confidence 445 6777788776653
No 65
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.97 E-value=3.6e-28 Score=215.60 Aligned_cols=303 Identities=11% Similarity=0.048 Sum_probs=227.7
Q ss_pred cchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHH----HHHHHHHHHHHHHHhhhhhcchhHHHHH
Q 019567 3 VAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVL----AWGVALWSLSTLLTPWAATHSTASLLAV 78 (339)
Q Consensus 3 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (339)
|.+|.+.+|+|.|.+++|++.+.+.+...+++++.|+++||+|||+.. ..+..+..+ ..+ ..+++++.+++.
T Consensus 25 p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~--~~~--~~~~~~~~l~~~ 100 (382)
T TIGR00902 25 PFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA--AFS--AGAHNAWLLFIA 100 (382)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH--HHH--HhhhhHHHHHHH
Confidence 667899999999999999999999999999999999999999985433 222222222 233 347899999999
Q ss_pred HHHHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhh
Q 019567 79 RAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSK 158 (339)
Q Consensus 79 r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~ 158 (339)
|.++|.+.+...|...++..|+ +++|++++|......++|.+++|++++.+.+++|||..|.+.+....+ .+.....
T Consensus 101 ~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~~-~~~~~~~ 177 (382)
T TIGR00902 101 IGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLAF-MLIGFLI 177 (382)
T ss_pred HHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHH-HHHHHHc
Confidence 9999999988889988887765 478899999999999999999999999999999999999887655332 2233333
Q ss_pred ccCCCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccchh
Q 019567 159 VTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQA 238 (339)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~ 238 (339)
.|+.++++++ + + ++++...+.++++|+|+++...+..++..........+.|.|+++ .|.++.+.
T Consensus 178 ~~~~~~~~~~-~--~-----------~~~~~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~ 242 (382)
T TIGR00902 178 KPTIPPKDAI-P--E-----------DESQGDSAFIALLKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASAT 242 (382)
T ss_pred CCCCCCCccc-c--c-----------cccccchhHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHH
Confidence 2322221110 0 0 011112357789999999999888888888888899999999988 79999999
Q ss_pred hHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhcccchhHHHHHHHHHHHHhhhcccc
Q 019567 239 AWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAG 318 (339)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (339)
+.+.....++.++..++.+++.||+++| ..+..+.+...+...++.+.++.+......++-....+...+.
T Consensus 243 g~l~~~~~~~~i~~~~~~~~l~~r~g~~---------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~ 313 (382)
T TIGR00902 243 GLLWGIGVLAEIIIFAFSNKLFQNCSAR---------DLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLA 313 (382)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHhhCCHH---------HHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9998888888888999999999998865 5667888888888888777776665555455555555555555
Q ss_pred hhhhhh-hcccchhhhhhh
Q 019567 319 YLLNIQ-IAQDFSTALQIQ 336 (339)
Q Consensus 319 ~~~~~~-~~p~~~g~~~g~ 336 (339)
...... ..++++++.++.
T Consensus 314 ~~~~i~~~~~~~~~~~q~~ 332 (382)
T TIGR00902 314 AMRYIAAQPGSEIAKLQAL 332 (382)
T ss_pred HHHHHHhCCHhhHHHHHHH
Confidence 554555 644555555554
No 66
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.97 E-value=1.1e-28 Score=221.58 Aligned_cols=311 Identities=14% Similarity=0.085 Sum_probs=225.6
Q ss_pred cchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhh---hhhcchhHHHHHH
Q 019567 3 VAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPW---AATHSTASLLAVR 79 (339)
Q Consensus 3 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~r 79 (339)
+.+|.+.+|++.++.+.|++.+.+.++..+++++.|+++||+|||+++..+.++.+++.+..++ ...++++.+++.|
T Consensus 38 ~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 117 (417)
T PRK10489 38 VAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLG 117 (417)
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHH
Confidence 4578888999999999999999999999999999999999999999999988887777665421 1256788999999
Q ss_pred HHHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhc
Q 019567 80 AFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKV 159 (339)
Q Consensus 80 ~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~ 159 (339)
+++|++.+...+...+++.|+.|+++|+++.++.....++|..+||.+++.+.+..+|++.|++.++..++..+.. ...
T Consensus 118 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~-~~l 196 (417)
T PRK10489 118 LWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPL-LRL 196 (417)
T ss_pred HHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhC
Confidence 9999999888899999999999999999999999999999999999999999998999999998777666554443 344
Q ss_pred cCCCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccchhh
Q 019567 160 TNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAA 239 (339)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~ 239 (339)
|+.+++++..++ +.++....++.++++|.++...+..++... ......++|.|+++.+|.++.+.+
T Consensus 197 ~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~g~~~~~~g 262 (417)
T PRK10489 197 PALPPPPQPREH-------------PLRSLLAGFRFLLASPVVGGIALLGGLLTM-ASAVRVLYPALADEVWQMGAAQIG 262 (417)
T ss_pred CCCCCCCccccc-------------chHHHHHHHHHHHcChHHHHHHHHHHHHHH-HHhHHHhhHHHHHhccCCChhHhH
Confidence 554432211100 000111235567788877665555444332 455678899999998899999999
Q ss_pred HhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhcccchhHHHHHHHHHHHHhhhcccch
Q 019567 240 WFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGY 319 (339)
Q Consensus 240 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (339)
.+.+...++.+++.++.+++.||.+++ +.+..+.++..+..+++...++.+.......+.+...+...+..
T Consensus 263 ~~~~~~~~g~~ig~~~~~~l~~~~~~~---------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 333 (417)
T PRK10489 263 LLYAAVPLGAALGALTSGWLAHSARPG---------LLMLLSTLGSFLAVGLFGLMPMWILAVLCLALFGYLSAISSLLQ 333 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhccCcc---------hHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999874332 34445555555555555555544333333332222233333333
Q ss_pred hhhhh-h-cccchhhhhhhh
Q 019567 320 LLNIQ-I-AQDFSTALQIQQ 337 (339)
Q Consensus 320 ~~~~~-~-~p~~~g~~~g~q 337 (339)
..... . .++++|+.+|..
T Consensus 334 ~~~~~~~~p~~~~g~~~g~~ 353 (417)
T PRK10489 334 YTLLQTQTPDEMLGRINGLW 353 (417)
T ss_pred HHHHHhhCCHHHHHHHHHHH
Confidence 34444 4 446788887754
No 67
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.97 E-value=2.9e-28 Score=216.20 Aligned_cols=304 Identities=12% Similarity=0.048 Sum_probs=220.7
Q ss_pred CcchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcch----HHHHHHHHHHHHHHHHHhhhhhcchhHHHH
Q 019567 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGK----KVLAWGVALWSLSTLLTPWAATHSTASLLA 77 (339)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (339)
.|.+|.+.+|+|.|..++|+..+++.++..+++++.|+++||+||| +.+.+...+.. .... ..+++++.+++
T Consensus 24 ~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~l~i 99 (382)
T PRK11128 24 LPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLFA--VAFW--FGAHSFWLLFV 99 (382)
T ss_pred hhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHHH--HHHH--HhcccHHHHHH
Confidence 3677888999999999999999999999999999999999999984 33333322222 1222 33688999999
Q ss_pred HHHHHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHh
Q 019567 78 VRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTS 157 (339)
Q Consensus 78 ~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~ 157 (339)
.|++.|++.+...|...+++.++ +++|+++.+......++|..+||++++++.+++|||..|++.++..++..+ ...
T Consensus 100 ~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~-~~~ 176 (382)
T PRK11128 100 AIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASMLL-GQL 176 (382)
T ss_pred HHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHH-HHH
Confidence 99999999998889888888877 467888899999999999999999999999999999999987765444333 233
Q ss_pred hccCCCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccch
Q 019567 158 KVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQ 237 (339)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~ 237 (339)
..||++++.+ +++ ++++...++++++|+|+++...+..++.........++.|.|++| .|.+..+
T Consensus 177 ~~~~~~~~~~----~~~----------~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~g~s~~~ 241 (382)
T PRK11128 177 LRPTIMPQGE----SRQ----------QESAGWPAWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQA-AGYSAST 241 (382)
T ss_pred ccCCCCCccc----ccc----------ccccccchHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHHHH-CCCCHhH
Confidence 3343322110 000 011123467899999999988887777777777788888999977 7999999
Q ss_pred hhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhcccchhHHHHHHHHHHHHhhhccc
Q 019567 238 AAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQA 317 (339)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (339)
.+.+.+...++.++..++.+++.||++++ ..+..+.+..++....+...++.+.......+.....+...+
T Consensus 242 ~g~~~~~~~~~~~~~~~~~g~l~~r~~~~---------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~ 312 (382)
T PRK11128 242 IGYLWSLGVVAEVLIFAFSNRLFRRWSAR---------DLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHL 312 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCHH---------HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 99998888888888889999999998865 445566677776666666666655444433333333444444
Q ss_pred chhhhhh-hcccchhhhhhh
Q 019567 318 GYLLNIQ-IAQDFSTALQIQ 336 (339)
Q Consensus 318 ~~~~~~~-~~p~~~g~~~g~ 336 (339)
....... ..+++.++.++.
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~ 332 (382)
T PRK11128 313 AAMRYIAARPGSEVIRLQAL 332 (382)
T ss_pred HHHHHHHHCCHhhhHHHHHH
Confidence 4444444 555665665543
No 68
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.97 E-value=9.7e-29 Score=226.95 Aligned_cols=260 Identities=15% Similarity=0.167 Sum_probs=188.8
Q ss_pred CcchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHH
Q 019567 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (339)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l 81 (339)
++.+|.+.+|+|+|+.+.+++.+.+.+++.++.++.|+++||+|||+++..+.++.+++.++. ..++|++.+++.|++
T Consensus 40 ~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~l 117 (496)
T PRK03893 40 TLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLAC--GFAPGYWTLFIARLV 117 (496)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH--HHHhHHHHHHHHHHH
Confidence 356789999999999999999999999999999999999999999999999999999999998 558999999999999
Q ss_pred HHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhccC
Q 019567 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTN 161 (339)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~ 161 (339)
.|++.+...+....++.|++|+|+|++++++...+..+|..++|.+.+.+.+.++||+.|++..+..+ ..+......||
T Consensus 118 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~~~-~~~~~~~~~p~ 196 (496)
T PRK03893 118 IGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILPII-FALWLRKNLPE 196 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHH-HHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999999999999999987544333 23333333454
Q ss_pred CCCCCCCCChHH--HHHHHhCCccccccCCCccH---------HHHh-------------------------------cc
Q 019567 162 DPCNSPFVSKSE--LRLIQAGKSDSVKKRNPPSL---------RHLL-------------------------------SK 199 (339)
Q Consensus 162 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~---------~~~~-------------------------------~~ 199 (339)
+++++++.++++ .+..+.... +++...... ...+ +.
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (496)
T PRK03893 197 AEDWKEKHAGKAPVRTMVDILYR--GEHRIINILLTLAAAAALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRW 274 (496)
T ss_pred chhhhhhccccccchhHHHHHhc--chhHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccch
Confidence 432111100000 000000000 000000000 0000 00
Q ss_pred hhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHh
Q 019567 200 LPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKA 266 (339)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~ 266 (339)
+.........+......+....++|.|+++.+|++..+.+.+.+...++.++++++.|++.||+++|
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~ 341 (496)
T PRK03893 275 PTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTR 341 (496)
T ss_pred hHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch
Confidence 0000001111111111123457899999877899999999999999999999999999999999875
No 69
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.97 E-value=3.4e-28 Score=223.09 Aligned_cols=260 Identities=13% Similarity=0.092 Sum_probs=184.3
Q ss_pred cchhhhHhHh-----CCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcc------
Q 019567 3 VAVVPLAAKF-----GWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHS------ 71 (339)
Q Consensus 3 ~~~~~i~~~~-----~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~------ 71 (339)
...|.+.+++ +.++.+.+++.+.+.++..+++++.|+++||+|||+++..+.++..++.++++ .+++
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~--~~~~~~~~~~ 114 (502)
T TIGR00887 37 LVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASG--LSPGSSPKSV 114 (502)
T ss_pred HHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH--HccCcccchH
Confidence 3455565542 34556779999999999999999999999999999999999999999999884 3554
Q ss_pred hhHHHHHHHHHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhh------------------
Q 019567 72 TASLLAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLS------------------ 133 (339)
Q Consensus 72 ~~~~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~------------------ 133 (339)
++.++++|+++|++.|...+....++.|++|+++|++++++.+....+|..+++.++..+..
T Consensus 115 ~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (502)
T TIGR00887 115 MATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGS 194 (502)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccc
Confidence 68899999999999999999999999999999999999999999999999999988866532
Q ss_pred -----hccchHHHHHHHHHHHHHHHHHHhhccCCCCCC---CCCChHHHHHHH---h-C---Cccc------cccCCCcc
Q 019567 134 -----TIGISGPFILFSSLGLLWLSTWTSKVTNDPCNS---PFVSKSELRLIQ---A-G---KSDS------VKKRNPPS 192 (339)
Q Consensus 134 -----~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~---~-~---~~~~------~~~~~~~~ 192 (339)
.++||+.|.+.++.+++. .+..++.||+|++. ++.+++..+... . + ..++ +++....+
T Consensus 195 ~~~~~~~~WR~~~~~~~ip~~i~-~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (502)
T TIGR00887 195 CVPAVDYMWRILIGFGAVPALLA-LYFRLTIPETPRYTADVAKDVEQAASDMSAVLQVKIEAEPDEVEKASTAVEVPKAS 273 (502)
T ss_pred ccchhcccHHHHHHHHHHHHHHH-HHHHHhCCCCHHHHHHhCcchHHHHHHHHHHhccccccCcccccchhccccchhhh
Confidence 247999998877766554 44456779999852 221111111110 0 0 0000 00111135
Q ss_pred HHHHhcc---hhHHH----HHHHHHhhHHHHHHHHHhhhhhhhhhhCCccchhhH------------hhHHhHHHHHHHH
Q 019567 193 LRHLLSK---LPSWT----VIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAW------------FSAVPWGTMAVSG 253 (339)
Q Consensus 193 ~~~~~~~---~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~------------~~~~~~~~~~~~~ 253 (339)
+++++++ ++.+. .....+.....+++...|.|.++++ .|++..+.+. ......++.+++.
T Consensus 274 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~ 352 (502)
T TIGR00887 274 WSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSA-IGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGY 352 (502)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHH-HcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6777653 22211 2223344455667777888999876 5887553221 1233344667788
Q ss_pred hhhhhhhHHHHHh
Q 019567 254 YMAGKASDSLIKA 266 (339)
Q Consensus 254 ~~~g~l~d~~~~~ 266 (339)
++.+++.||+|||
T Consensus 353 ~~~~~l~dr~gRR 365 (502)
T TIGR00887 353 WVTVFLVDIIGRK 365 (502)
T ss_pred HHHHHHhhhhcch
Confidence 8999999999976
No 70
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.97 E-value=6.8e-28 Score=214.65 Aligned_cols=247 Identities=17% Similarity=0.205 Sum_probs=189.3
Q ss_pred cchhhhHhHhC--CCccchhHHHHH-----HHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchh--
Q 019567 3 VAVVPLAAKFG--WSSSFLGIVQSS-----FLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTA-- 73 (339)
Q Consensus 3 ~~~~~i~~~~~--~s~~~~g~~~s~-----~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~-- 73 (339)
+..+.+.+++. .++++.+...+. ..++..+++++.|+++||+|||+++..+.++..++.+++ +.+++++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~--~~~~~~~~~ 91 (394)
T TIGR00883 14 FAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLI--GLLPSYATI 91 (394)
T ss_pred HHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHH--hhCCChhhh
Confidence 34456666643 455666665543 233335689999999999999999999999999999998 5577765
Q ss_pred ------HHHHHHHHHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhh--------hhccchH
Q 019567 74 ------SLLAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIML--------STIGISG 139 (339)
Q Consensus 74 ------~~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~--------~~~~w~~ 139 (339)
.+++.|+++|++.+...+....++.|++|+|+|++..++.+.+..+|..+++.++..+. +.++||+
T Consensus 92 ~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~ 171 (394)
T TIGR00883 92 GIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRI 171 (394)
T ss_pred HHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHH
Confidence 47899999999999999999999999999999999999999999999999998876654 3578999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchh--HHHHHHHHHhhHHHHH
Q 019567 140 PFILFSSLGLLWLSTWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLP--SWTVIIANITNNWGYF 217 (339)
Q Consensus 140 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 217 (339)
.|++.++..++... .....||+++++++ ++ ++++...+.++.+++++ ++......++.....+
T Consensus 172 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-----~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (394)
T TIGR00883 172 PFLVSAVLVLIGLY-LRRNLEETPVFEKA-----QE---------KHKKKRGPIRETLTKHRKPFLLGLGLVIATTTTFY 236 (394)
T ss_pred HHHHHHHHHHHHHH-HHHhcCCChhHHHH-----Hh---------ccccccCCHHHHHHhchHHHHHHHHHHHHHHHHHH
Confidence 99987766554333 22333444322110 00 11122335667777665 7766677777777788
Q ss_pred HHHHhhhhhhhhhhCCccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHh
Q 019567 218 VLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKA 266 (339)
Q Consensus 218 ~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~ 266 (339)
....+.|.|+++++|.++.+.+.......++..++.++.|++.||+++|
T Consensus 237 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 285 (394)
T TIGR00883 237 LITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRR 285 (394)
T ss_pred HHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchH
Confidence 8889999999888899999999998899999999999999999999876
No 71
>PRK10054 putative transporter; Provisional
Probab=99.96 E-value=4.4e-28 Score=215.65 Aligned_cols=302 Identities=14% Similarity=0.089 Sum_probs=215.3
Q ss_pred hhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHhh
Q 019567 6 VPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLA 85 (339)
Q Consensus 6 ~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g 85 (339)
+.+++++|+|+.+.|+..+.+.++..+++++.|+++||+|||+++.++.++..++.++. .++++++.+++.|.+.|.+
T Consensus 32 ~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~ 109 (395)
T PRK10054 32 IYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAI--PLVNNVTLVVLFFALINCA 109 (395)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHH--HHHhHHHHHHHHHHHHHHH
Confidence 45678899999999999999999999999999999999999999999999998888888 5588999999999999988
Q ss_pred hhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhccCCCCC
Q 019567 86 EGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCN 165 (339)
Q Consensus 86 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 165 (339)
.+...+...++..|..|+++|++++++.....++|..++|++++.+.+ .+|+.+|++.++..++..+...+..||++++
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~ 188 (395)
T PRK10054 110 YSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFIQIWVQRSEKA 188 (395)
T ss_pred HHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 888888899999999999999999999999999999999999998875 7999999998877777655555545544322
Q ss_pred CCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhh--hCCccchhhHhhH
Q 019567 166 SPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTV--FNVNLKQAAWFSA 243 (339)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~g~~~~~~~~~~~ 243 (339)
+++.+ + +..+.++.+|+|+++...+..++..........+.+.|+.+. .+.+....+....
T Consensus 189 ~~~~~--~---------------~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 251 (395)
T PRK10054 189 IATET--G---------------SVWSPSVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLP 251 (395)
T ss_pred cccch--h---------------hhhhhhhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHH
Confidence 11000 0 001236678899988887777777666666666777776543 3445555666666
Q ss_pred HhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhcc-cchhHHHHHHHHHHHHhhhcccchhhh
Q 019567 244 VPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYA-KSPAVAAVLITIALSLSSFSQAGYLLN 322 (339)
Q Consensus 244 ~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (339)
...+.....+...|++.||.++| ..+..+.....+....+... ++.+...+...+.........+.....
T Consensus 252 ~~~~~~~~~~~~~g~~~~~~~~~---------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~ 322 (395)
T PRK10054 252 VNAAMVVSLQYSVGRRLNAANIR---------PLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYML 322 (395)
T ss_pred hhhhheeeehhHHHHHHccCCch---------hHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 66666666677888888887654 44445555555555555443 233322222222222222223333333
Q ss_pred hh-hcc-cchhhhhhh
Q 019567 323 IQ-IAQ-DFSTALQIQ 336 (339)
Q Consensus 323 ~~-~~p-~~~g~~~g~ 336 (339)
.. ..| +.+|+..+.
T Consensus 323 ~~~~~p~~~~~~~~~~ 338 (395)
T PRK10054 323 IDHIAPPGMKASYFSA 338 (395)
T ss_pred HHHhCCcccceehHhH
Confidence 43 334 566666553
No 72
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.96 E-value=2.4e-26 Score=193.61 Aligned_cols=305 Identities=15% Similarity=0.171 Sum_probs=242.0
Q ss_pred CcchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHH-hhhhhcchhHHHHHHH
Q 019567 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLT-PWAATHSTASLLAVRA 80 (339)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~r~ 80 (339)
.+++|++++.|+++..|.+++...++.+|.+.+++.|++.+|+|+|+.++.|+.++++++.+. +.+...++..++++-+
T Consensus 33 diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~lF 112 (422)
T COG0738 33 DILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALF 112 (422)
T ss_pred hhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999999999987 1224678999999999
Q ss_pred HHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhh-------------------ccchHHH
Q 019567 81 FFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLST-------------------IGISGPF 141 (339)
Q Consensus 81 l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~-------------------~~w~~~f 141 (339)
+.|.|.+...+.++.+++...|+++..+.+++.+..+++|..++|++++.+..+ -.|+++|
T Consensus 113 ila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pY 192 (422)
T COG0738 113 ILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPY 192 (422)
T ss_pred HHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHH
Confidence 999999999999999999999998899999999999999999999999887662 2488899
Q ss_pred HHHHHHHHHHHHHHHhhc-cCCCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHH
Q 019567 142 ILFSSLGLLWLSTWTSKV-TNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLL 220 (339)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (339)
...+....+..+...... |+.++..++ +.+.......+++|+|+++...+..|++........
T Consensus 193 l~~~~~lvll~v~~~~~k~p~~~~~~~~----------------~~~~~~~~~~~l~~~~~~~~gvl~~FlYVG~Eva~g 256 (422)
T COG0738 193 LILAGLLVLLAVLILLSKLPDLQVAAPS----------------LGASGSAGLSSLFQNKHLRLGVLAIFLYVGAEVAIG 256 (422)
T ss_pred HHHHHHHHHHHHHHHhccCCcCCccccc----------------ccccccchHHHHHhChHHHHHHHHHHHHHhHHHHHH
Confidence 888877766655544332 222221111 001111156889999999999999999999999999
Q ss_pred HhhhhhhhhhhCCccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhcccchhH
Q 019567 221 SWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAV 300 (339)
Q Consensus 221 ~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (339)
+|++.|+.|..|.+..+++...+....+.++|++++.++.+|+... +.+.+..++..+.++.....++...
T Consensus 257 sfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~---------k~Laf~a~~~ill~~~~~l~~g~v~ 327 (422)
T COG0738 257 SFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPE---------KYLAFYALIAILLLLAVALIGGVVA 327 (422)
T ss_pred HHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH---------HHHHHHHHHHHHHHHHHHHhcChHH
Confidence 9999999997799999999999999999999999999999988765 3444444444444444455555443
Q ss_pred HHHHHHHHHHHhhhcccchhhhhh-hcccchhh
Q 019567 301 AAVLITIALSLSSFSQAGYLLNIQ-IAQDFSTA 332 (339)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~g~ 332 (339)
.+. ..+.+.+.+..++...+... .-|++...
T Consensus 328 ~~~-l~~ig~F~simfPTIfslal~~l~~~ts~ 359 (422)
T COG0738 328 LYA-LFLIGLFNSIMFPTIFSLALKNLGEHTSV 359 (422)
T ss_pred HHH-HHHHHHHhHHHHHHHHHHHHhccCccccc
Confidence 333 34445556666676666666 55555443
No 73
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.96 E-value=1.1e-26 Score=202.11 Aligned_cols=325 Identities=12% Similarity=0.038 Sum_probs=237.4
Q ss_pred CcchhhhHhHhCCCccc-hhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHH
Q 019567 2 SVAVVPLAAKFGWSSSF-LGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRA 80 (339)
Q Consensus 2 ~~~~~~i~~~~~~s~~~-~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 80 (339)
+.+.|.+.+|+|+|++| .|.+.++++.+|+++.++.|+++||+|.|+++..+.+.+++.+++.+ +++++..+.+.|+
T Consensus 46 s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~--fa~Sl~~L~i~R~ 123 (511)
T TIGR00806 46 SFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLL--LGTSVWHMQLMEV 123 (511)
T ss_pred HHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHH
Confidence 45678999999999999 99999999999999999999999999999999999999999999994 4889999999999
Q ss_pred HHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHH--HHHHHHHHHHHHhh
Q 019567 81 FFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILF--SSLGLLWLSTWTSK 158 (339)
Q Consensus 81 l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~--~~~~~~~~~~~~~~ 158 (339)
+.|++.|... ....++.+|+|+++|+++.++..++..+|.+++++++++ ...+|||+.+.+. ...+.....++.++
T Consensus 124 llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~s~~~a~~~a~~ 201 (511)
T TIGR00806 124 FYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISLVFMTFSVFLALF 201 (511)
T ss_pred HHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999 999999999999999999999999999999999999999 5578999876553 22333444555556
Q ss_pred ccCCCCCC---CCCChH--HHHHHHhCCccc---cc---cC--------CCccHHHHhcchhHHHHHHHHHhhHHHHHHH
Q 019567 159 VTNDPCNS---PFVSKS--ELRLIQAGKSDS---VK---KR--------NPPSLRHLLSKLPSWTVIIANITNNWGYFVL 219 (339)
Q Consensus 159 ~~~~~~~~---~~~~~~--~~~~~~~~~~~~---~~---~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (339)
+|..++.. +..+.+ ...+.+....++ .. +. -...+++..+||.+....+.+.+...+++..
T Consensus 202 LP~~~~sl~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~a~~g~~qv 281 (511)
T TIGR00806 202 LKRPKRSLFFNRLEDVRGALPCELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWVFNSAGYYLI 281 (511)
T ss_pred CCCCchhhhhccccccccccccccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHHHHhhHHHHH
Confidence 66444321 110000 000000000000 00 00 0123445577888888888888888888888
Q ss_pred HHhhhhhhhhhhCCccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhcccchh
Q 019567 220 LSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPA 299 (339)
Q Consensus 220 ~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (339)
.+|.-..-++..+-+....|..-++..+.+.+..+..|++-.++.+. ....+.+..++.+..++++...++.|
T Consensus 282 ~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w~~~-------~~l~l~v~s~~~~gll~~m~~t~~Iw 354 (511)
T TIGR00806 282 TYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRWARW-------SKLLIAVVSAIQAGLVFWMSQSHDIW 354 (511)
T ss_pred HHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCchhh-------HHHHHHHHHHHHHHHhhhhhcccchH
Confidence 88777666554332223567777777777888888889886554332 23555566666677777788888888
Q ss_pred HHHHHHHHHHHHhhhcccchhhhhh--hcccchhhhhhhh
Q 019567 300 VAAVLITIALSLSSFSQAGYLLNIQ--IAQDFSTALQIQQ 337 (339)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~~g~~~g~q 337 (339)
...+..++......+..+....... +..+..|.+.|+.
T Consensus 355 ~~Y~~yvlf~~~y~flitia~~~iA~~L~~~~~aLvFGiN 394 (511)
T TIGR00806 355 VLYVTYVLFRGIYQFLVPIATFQIASSLSKELCALVFGIN 394 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccceEEEEecH
Confidence 8888877777777666665555444 5555666666653
No 74
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.96 E-value=2.1e-26 Score=191.04 Aligned_cols=306 Identities=14% Similarity=0.163 Sum_probs=241.9
Q ss_pred CCcchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHH
Q 019567 1 MSVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRA 80 (339)
Q Consensus 1 ~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 80 (339)
++|+++++++|+|+|.++.|.++++..+...+.+++..++++|+|.++.+..++++.+++.++-.. .+...++.+-.
T Consensus 31 vgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~---~~~~~L~~gt~ 107 (395)
T COG2807 31 VGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSL---GGLPLLFLGTL 107 (395)
T ss_pred hhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhc---ccHHHHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999999999999844 47888999999
Q ss_pred HHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhc-cchHHHHHHHHHHHHHHHHHHhhc
Q 019567 81 FFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTI-GISGPFILFSSLGLLWLSTWTSKV 159 (339)
Q Consensus 81 l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~-~w~~~f~~~~~~~~~~~~~~~~~~ 159 (339)
+.|.|.+......+.+|.+.|| |+-+..+|+|++..++|..+++.++..+.++. |||......+.++++..+.++...
T Consensus 108 l~G~gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~WlPq~ 186 (395)
T COG2807 108 LAGAGIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWLPQA 186 (395)
T ss_pred HHHhhHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHhhhc
Confidence 9999999999999999999996 78899999999999999999999999999887 799999999999988777666432
Q ss_pred cCCCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccchhh
Q 019567 160 TNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAA 239 (339)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~ 239 (339)
.+++ .. +.+.+..+-.+++|+|.-|.+.+.+.+++..+|....|+|.++.| .|+|++++|
T Consensus 187 -~r~~-~~-----------------~~~~~~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~-~G~sa~~aG 246 (395)
T COG2807 187 -LREQ-AA-----------------SIATKLVSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILID-RGLSAAEAG 246 (395)
T ss_pred -cccc-cc-----------------ccccccccccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHH-cCCCHHHhh
Confidence 1111 00 111112234568999999999999999999999999999999999 599999999
Q ss_pred HhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhcccchhHHHHHHHHHHHHhhhcccch
Q 019567 240 WFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGY 319 (339)
Q Consensus 240 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (339)
.+.+...+..++.++..+.+.+|..++ +........++.++.+.+.+.+........++++.+..+.+....
T Consensus 247 ~llsl~~l~~~~~~ll~P~la~R~~n~--------r~~~~~~~~~~l~G~~G~~~~P~~~~~lw~~llG~G~G~~F~laL 318 (395)
T COG2807 247 SLLSLMQLAQLPTALLIPLLARRSKNQ--------RPLVVLALLLMLVGLVGLLLAPGQLPILWALLLGLGQGGAFPLAL 318 (395)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhccc--------chHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhCccchHHHHHH
Confidence 999999999999999999999986554 344445555555555555454433222222333333232222222
Q ss_pred hhhhh--hcccchhhhhhhhc
Q 019567 320 LLNIQ--IAQDFSTALQIQQE 338 (339)
Q Consensus 320 ~~~~~--~~p~~~g~~~g~q~ 338 (339)
..... -.|+..+..+|..|
T Consensus 319 ~li~~rs~~a~~Aa~LSgmaQ 339 (395)
T COG2807 319 TLILLRSSDAAIAAALSGMAQ 339 (395)
T ss_pred HHHHhhcCChHHHHHHHHHhh
Confidence 22222 55667777776654
No 75
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.96 E-value=3.4e-26 Score=208.55 Aligned_cols=248 Identities=13% Similarity=0.161 Sum_probs=192.2
Q ss_pred cchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhh-----cchHH-HHHHHHHHHHHHHHHhhh-hhcchhHH
Q 019567 3 VAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKY-----GGKKV-LAWGVALWSLSTLLTPWA-ATHSTASL 75 (339)
Q Consensus 3 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~-----G~r~~-l~~~~~~~~~~~~~~~~~-~~~~~~~~ 75 (339)
..+|...++.|.|.++++.+ +.....+ +..+++|+++||+ ||||. +..+.++.+++...+++. ..++++.+
T Consensus 33 ~~l~~~l~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~l~~l 110 (491)
T PRK11010 33 GTLQAWMTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPGTQLRWL 110 (491)
T ss_pred HHHHHHHHhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcCCcchHHHH
Confidence 45678888899999999997 4444444 6899999999999 99885 667777777776666332 12578889
Q ss_pred HHHHHHHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhh-hccchHHHHHHHHHHHHHHHH
Q 019567 76 LAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLS-TIGISGPFILFSSLGLLWLST 154 (339)
Q Consensus 76 ~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~-~~~w~~~f~~~~~~~~~~~~~ 154 (339)
.+.+++.|++.+...+...+++.|++|+|+|+++.++...+..+|.++++.++.++.+ ..|||..|++.+++.++..+.
T Consensus 111 ~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~ 190 (491)
T PRK11010 111 AALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIA 190 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999988 579999999998887766554
Q ss_pred HHhhccCCCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCc
Q 019567 155 WTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVN 234 (339)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~ 234 (339)
.+ ..||++++.+. +++ .++....++++.+++++.+...+..++..........+.++|+.+++|++
T Consensus 191 ~~-~~~e~~~~~~~-~~~------------~~~~~~~~l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s 256 (491)
T PRK11010 191 TL-LAPEPTDTIPV-PKT------------LEQAVVAPLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFD 256 (491)
T ss_pred HH-hcCCCcccccc-ccc------------hhhhHHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 44 35665432110 000 00011124677888887777666666666666666778888987778999
Q ss_pred cchhhHhhH-HhHHHHHHHHhhhhhhhHHHHHh
Q 019567 235 LKQAAWFSA-VPWGTMAVSGYMAGKASDSLIKA 266 (339)
Q Consensus 235 ~~~~~~~~~-~~~~~~~~~~~~~g~l~d~~~~~ 266 (339)
.++.+.... ...++.+++.+++|++.||+++|
T Consensus 257 ~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~ 289 (491)
T PRK11010 257 AGEVGLVNKTLGLLATIVGALYGGILMQRLSLF 289 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 999999874 55578899999999999999876
No 76
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.95 E-value=1.9e-26 Score=207.98 Aligned_cols=324 Identities=19% Similarity=0.198 Sum_probs=253.0
Q ss_pred CcchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHH-HHH
Q 019567 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLA-VRA 80 (339)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~r~ 80 (339)
+++.+.++++++-+.++++|+.++......+..|+.+.+.||+|.|.+.+.|.++.+++.++. +++++++.+++ .-+
T Consensus 66 Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~ls--sF~~~i~~l~lt~gv 143 (509)
T KOG2504|consen 66 GLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLS--SFATSLWQLYLTFGV 143 (509)
T ss_pred hhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHH--HHHhhHHHHHHHHHH
Confidence 567889999999999999999999999999999999999999999999999999999999999 66899987765 468
Q ss_pred HHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhcc
Q 019567 81 FFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVT 160 (339)
Q Consensus 81 l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~ 160 (339)
+.|+|.++.+.+...+++.+| +|+|+.+.|+...+.++|..+-|++...+.+.+|||+.+++.+.+.+-..+......|
T Consensus 144 i~G~G~~~~~~paiviv~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp 222 (509)
T KOG2504|consen 144 IGGLGLGLIYLPAVVILGTYF-EKKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRP 222 (509)
T ss_pred HhhccchhhhcchhhhhhhHh-HHHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCC
Confidence 899999999999999999998 5899999999999999999999999999999999999999999988777777777766
Q ss_pred CCCCCCCC--------------------CChH------------HHHHHHhCCccccccCCCcc----HHHHhcchhHHH
Q 019567 161 NDPCNSPF--------------------VSKS------------ELRLIQAGKSDSVKKRNPPS----LRHLLSKLPSWT 204 (339)
Q Consensus 161 ~~~~~~~~--------------------~~~~------------~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 204 (339)
..++..+. .... +....++..++.+....+.. ..+++++|.++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~ 302 (509)
T KOG2504|consen 223 LSPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKDPKFLL 302 (509)
T ss_pred CCcCCCchhhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhhhhhhHHHHcCchHHH
Confidence 43332111 0000 00000000000000011111 257899999999
Q ss_pred HHHHHHhhHHHHHHHHHhhhhhhhhhhCCccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhh
Q 019567 205 VIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIG 284 (339)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 284 (339)
..+...+...+++....++|.|.++ +|++..+++.+.++.++..++++++.|++.|+...+ ++.+..++.+.
T Consensus 303 ~~~~~~~~~~g~~~p~~~l~~~~~~-~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~-------~~~~~~~~ll~ 374 (509)
T KOG2504|consen 303 LALSNLFAYLGFNVPFVYLPSYAKS-LGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIR-------ALVLFLLTLLI 374 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-cCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccc-------hHHHHHHHHHH
Confidence 9999999999999999999999996 799999999999999999999999999999998744 46778888888
Q ss_pred hhhHhhhhhcccchhHHHHHHHHHHHHhhhcccchhhhhh--hcccchhhhhhh
Q 019567 285 PGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQ--IAQDFSTALQIQ 336 (339)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~~g~~~g~ 336 (339)
.+++.+...+.++.+......++.+.+.+........... +..++...+.|.
T Consensus 375 ~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl 428 (509)
T KOG2504|consen 375 AGLARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGL 428 (509)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHH
Confidence 8888877777777755554444444444444333333333 444554444443
No 77
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.95 E-value=1.1e-26 Score=233.26 Aligned_cols=316 Identities=19% Similarity=0.130 Sum_probs=224.7
Q ss_pred hhhhHhHhCCCcc--chhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhh-hhhcchhHHHHHHHH
Q 019567 5 VVPLAAKFGWSSS--FLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPW-AATHSTASLLAVRAF 81 (339)
Q Consensus 5 ~~~i~~~~~~s~~--~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~r~l 81 (339)
.+.+.++++.+.+ ..+++.+++.+++.++++++|+++||+|||++++.+.++..+..++..+ ...++++.+++.|++
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 112 (1146)
T PRK08633 33 QNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFL 112 (1146)
T ss_pred HHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHH
Confidence 4556667776544 4689999999999999999999999999999999988776666555422 235789999999999
Q ss_pred HHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhh--------c-cchHHHHHHHHHHHHHH
Q 019567 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLST--------I-GISGPFILFSSLGLLWL 152 (339)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~--------~-~w~~~f~~~~~~~~~~~ 152 (339)
+|++.+...+...+++.|++|+++|++++++.+.+.++|.++++++++++.+. + +|++.+.+..+...+..
T Consensus 113 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (1146)
T PRK08633 113 LGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLG 192 (1146)
T ss_pred HHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999876 2 34555544444443434
Q ss_pred HHHHhhccCCCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhC
Q 019567 153 STWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFN 232 (339)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g 232 (339)
++..+..|+.+++.....+.+. ....+.....++.++++|.++...+..++..........++|.|+++.+|
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 264 (1146)
T PRK08633 193 LIFAYRLPKVPAAAPEVFDKKK--------YLFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLG 264 (1146)
T ss_pred HHHHhcCcCCCCCCcccccccc--------cccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhC
Confidence 4444455666543322110000 00001112246677888888887777777777777778899999999899
Q ss_pred Cccc-hhhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhcccchhHHHHHHHHHHHH
Q 019567 233 VNLK-QAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSL 311 (339)
Q Consensus 233 ~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (339)
++.. +.+++.+...++.+++.++.+++.||++++ ..+..+.++.+++.+++....+.+...+...+.+.+
T Consensus 265 ~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 335 (1146)
T PRK08633 265 LDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIEL---------GLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFS 335 (1146)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEc---------cchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 9998 899999999999999999999999998765 233344455555555555444444433333333334
Q ss_pred hhhcccchhhhhh--hcccchhhhhhhh
Q 019567 312 SSFSQAGYLLNIQ--IAQDFSTALQIQQ 337 (339)
Q Consensus 312 ~~~~~~~~~~~~~--~~p~~~g~~~g~q 337 (339)
.+.......+... ..++++|.+++..
T Consensus 336 ~~~~~~~~~~~~~~~~p~~~rg~~~~~~ 363 (1146)
T PRK08633 336 AGLFIVPLNALIQFRAPEKELGKVLAAN 363 (1146)
T ss_pred HHHhhHHHHHHHhhcCCccchhhhhHHH
Confidence 4444444445554 4557788877654
No 78
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.95 E-value=2.7e-27 Score=197.99 Aligned_cols=264 Identities=20% Similarity=0.191 Sum_probs=219.8
Q ss_pred hHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHhhhhcc
Q 019567 10 AKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGVA 89 (339)
Q Consensus 10 ~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~~~~ 89 (339)
++.+-+++++|++.+.+.+.+.+.+++.|.+.||+|+|..+++|...+..+++++ ++.+++++++++|.+||+|.++.
T Consensus 99 ~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilF--afg~sy~~l~vAR~LQgvgsA~~ 176 (464)
T KOG3764|consen 99 ISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILF--AFGNSYPMLFVARSLQGVGSAFA 176 (464)
T ss_pred cCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHH--HHcchhHHHHHHHHHhhhhHHHH
Confidence 3456677899999999999999999999999999999999999999999999999 66899999999999999999999
Q ss_pred hhhhHHHHhhhCCcc-hhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCC
Q 019567 90 MPAMSTLTSRWFPSH-ERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPF 168 (339)
Q Consensus 90 ~~~~~~~i~~~~~~~-~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (339)
.+.+.++++|.||++ +|++++|+.-.+.++|..+||+.++.+.|..|.+.+|+++++++++-..+-++..++++.+.+
T Consensus 177 ~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~~- 255 (464)
T KOG3764|consen 177 DTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDPD- 255 (464)
T ss_pred HhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCcc-
Confidence 999999999999875 589999999999999999999999999999999999999999999988877777665544331
Q ss_pred CChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccchhhHhhHHhHHH
Q 019567 169 VSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGT 248 (339)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~ 248 (339)
+..+..++++++++|.++.........+.........++.+..|.+..+.-+.|..+....+.
T Consensus 256 -----------------~~~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~ 318 (464)
T KOG3764|consen 256 -----------------STEQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLS 318 (464)
T ss_pred -----------------ccccCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeecccccc
Confidence 122334688999999998877666666666666667788888887774444888888888888
Q ss_pred HHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhcccchhH
Q 019567 249 MAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAV 300 (339)
Q Consensus 249 ~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (339)
..++..+.|.+.||+++. |......+.+..+.+.....+.++...
T Consensus 319 y~ig~~lfg~la~k~~~~-------~wl~~~~gl~~~G~~~~~iP~~~~~~~ 363 (464)
T KOG3764|consen 319 YAIGTNLFGKLADKYPHL-------RWLLSLGGLATVGVSSGPIPFATSIAQ 363 (464)
T ss_pred hhccCchHHHHHHhcCch-------hHHHHHHHHHHHHHHhchhHhhhhHHH
Confidence 999999999999999854 334455566666666666666655443
No 79
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.95 E-value=5.1e-25 Score=196.79 Aligned_cols=248 Identities=13% Similarity=0.089 Sum_probs=189.5
Q ss_pred cchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhh-----cchH-HHHHHHHHHHHHHHHHhhhh-hcchhHH
Q 019567 3 VAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKY-----GGKK-VLAWGVALWSLSTLLTPWAA-THSTASL 75 (339)
Q Consensus 3 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~-----G~r~-~l~~~~~~~~~~~~~~~~~~-~~~~~~~ 75 (339)
..+|.+-+|.|.|.+++|++..+... .+.++++|+++||+ |||| .+..+.++.+++.....+.. .++++.+
T Consensus 20 ~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~~l 97 (402)
T PRK11902 20 GTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHAALWPL 97 (402)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCccchHHHH
Confidence 35788888999999999999777765 59999999999999 8875 78888888877777763321 1457778
Q ss_pred HHHHHHHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhh-ccchHHHHHHHHHHHHHHHH
Q 019567 76 LAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLST-IGISGPFILFSSLGLLWLST 154 (339)
Q Consensus 76 ~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~-~~w~~~f~~~~~~~~~~~~~ 154 (339)
.+..++.++..+...+...+++.|++|+|+|+++.++...+.++|..+++.++..+.+. .|||..|++.++..++..+.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~ 177 (402)
T PRK11902 98 AGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALT 177 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHH
Confidence 88888888888889999999999999999999999999999999999999999998885 59999999988877665443
Q ss_pred HHhhccCCCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCc
Q 019567 155 WTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVN 234 (339)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~ 234 (339)
....||+++++++. ++. +++...++++++|+|.++...+..++..........+.+.++.+++|++
T Consensus 178 -~~~~~e~~~~~~~~-~~~------------~~~~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~ 243 (402)
T PRK11902 178 -TLWAPEPEVPARPP-RSL------------GEAVVGPLRDFFSRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFS 243 (402)
T ss_pred -HHhcCCCccccccc-chh------------HHHHHHHHHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Confidence 34455544322111 000 0011225678899999888777666655544433445556677778999
Q ss_pred cchhhHhhHHhHH-HHHHHHhhhhhhhHHHHHh
Q 019567 235 LKQAAWFSAVPWG-TMAVSGYMAGKASDSLIKA 266 (339)
Q Consensus 235 ~~~~~~~~~~~~~-~~~~~~~~~g~l~d~~~~~ 266 (339)
+++.+.+....+. +.+++.++.+++.||+++|
T Consensus 244 ~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~ 276 (402)
T PRK11902 244 AGEVGIVNKTLGLAATIVGALAGGTLMVRLGLY 276 (402)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 9999988766544 5788999999999999876
No 80
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.95 E-value=1.7e-26 Score=231.41 Aligned_cols=237 Identities=16% Similarity=0.155 Sum_probs=184.4
Q ss_pred cchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHH---HHHHHHHHHHHHhhhhhcchhHHHHHHHHHHhhhhcchhhh
Q 019567 17 SFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAW---GVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGVAMPAM 93 (339)
Q Consensus 17 ~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~~~~~~~~ 93 (339)
...++..+++.+.+.+.++++|+++||+|||+++.. ..+...+..+.. ...+|++.++++|+++|++.+...|..
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~--~~~~s~~~l~~~~~l~gi~~a~~~p~~ 129 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYG--FHLNSVPLLFAALFLMGIHSALFGPIK 129 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHH--HHHhhHHHHHHHHHHHHHHHHhhchHH
Confidence 346888889999999999999999999999997643 222222222222 235899999999999999999999999
Q ss_pred HHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChHH
Q 019567 94 STLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVSKSE 173 (339)
Q Consensus 94 ~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (339)
.+++.+++|+++|++++++.+++.++|.++||++++++.+..+|++.|...++..++ .++.....|+.++..+......
T Consensus 130 ~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 208 (1140)
T PRK06814 130 YSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVL-GWLASLFIPKTGNAAPDLKIDR 208 (1140)
T ss_pred HHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHH-HHHHHhhCCCCCCCCCCCeecc
Confidence 999999999999999999999999999999999999999999999999544444443 3444444555443221111000
Q ss_pred HHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccchhhHhhHHhHHHHHHHH
Q 019567 174 LRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSG 253 (339)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 253 (339)
. ..++....++.+.++|.++...+..++.++.......++|.|+++.+|.++.+.+.+.+...++.+++.
T Consensus 209 -~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~ 278 (1140)
T PRK06814 209 -N---------IIRSTITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGS 278 (1140)
T ss_pred -c---------hHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHH
Confidence 0 000011246778889999998888888888888888999999999899999999999999999999999
Q ss_pred hhhhhhhHHHHHh
Q 019567 254 YMAGKASDSLIKA 266 (339)
Q Consensus 254 ~~~g~l~d~~~~~ 266 (339)
++.|++.|+..++
T Consensus 279 ~~~g~l~~~~~~~ 291 (1140)
T PRK06814 279 FLASKLSEGRITL 291 (1140)
T ss_pred HHHHHHhCCceee
Confidence 9999999865544
No 81
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.95 E-value=1.9e-25 Score=199.26 Aligned_cols=277 Identities=14% Similarity=0.061 Sum_probs=194.9
Q ss_pred chhh-hHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhh-hhh-----cchhHHH
Q 019567 4 AVVP-LAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPW-AAT-----HSTASLL 76 (339)
Q Consensus 4 ~~~~-i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~-~~~-----~~~~~~~ 76 (339)
.+|. +.+++|.|+.+.|++.+.+.++..+++++.|+++||+|||+.++.+....+++...... ... +....++
T Consensus 24 ~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (396)
T TIGR00882 24 FFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAI 103 (396)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 3444 45679999999999999999999999999999999999999999877666554432210 111 2234456
Q ss_pred HHHHHHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHH
Q 019567 77 AVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWT 156 (339)
Q Consensus 77 ~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~ 156 (339)
+.|++.|++.+...+....+..|.. +++++.++......++|..++|.+++.+.+ .+||.+|++.+++.++..+..+
T Consensus 104 ~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~ 180 (396)
T TIGR00882 104 VGGLYLGFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLLM 180 (396)
T ss_pred HHHHHHHHHhccchhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHHH
Confidence 7788899988888888887776653 334567788888889999999999998865 5999999998888877665555
Q ss_pred hhccCCCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhh---CC
Q 019567 157 SKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVF---NV 233 (339)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---g~ 233 (339)
...||+|++++. + + . .++++++.+.++.++++|+|+++...+..++....+.....+.+.|+++.+ +.
T Consensus 181 ~~~~~~~~~~~~--~-~-----~-~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~ 251 (396)
T TIGR00882 181 FAKPKAPSSATV--A-N-----A-LGANASAFSLKLALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQ 251 (396)
T ss_pred HhCCCCchhhhh--h-c-----c-cccccCCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 444444322110 0 0 0 000111222345788999999887777666666666666677888887754 44
Q ss_pred ccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhcccchhHH
Q 019567 234 NLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVA 301 (339)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (339)
+....+...+...+...++.+..+++.||+++| .....+..+.++...+....++.+..
T Consensus 252 ~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~---------~~l~~~~~l~~l~~~~~~~~~~~~~~ 310 (396)
T TIGR00882 252 GTRVFGYVTTMGELLNALIMFCAPLIINRIGAK---------NALLIAGTIMSVRIIGSSFATTALEV 310 (396)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---------hhHHHHHHHHHHHHHHHHhcCChHHH
Confidence 555678888888888888999999999999876 34455555555555555555555443
No 82
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.95 E-value=5.8e-25 Score=193.97 Aligned_cols=275 Identities=19% Similarity=0.183 Sum_probs=204.6
Q ss_pred hHhHhC--CCccc----hhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhh-hhcchhHHHHHHH
Q 019567 8 LAAKFG--WSSSF----LGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWA-ATHSTASLLAVRA 80 (339)
Q Consensus 8 i~~~~~--~s~~~----~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~r~ 80 (339)
+.+++| .|+++ .+.+.+.+.+|.++|++..+.++||+|||..+.+..++..++.++..++ ..+++++++++|+
T Consensus 45 ~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~ 124 (485)
T KOG0569|consen 45 LIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRL 124 (485)
T ss_pred HHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 445566 33333 4677889999999999999999999999999999988888888776443 3578999999999
Q ss_pred HHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHH--HHhhhhccchHHHHHHHHHHHHHHHHHHhh
Q 019567 81 FFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLT--PIMLSTIGISGPFILFSSLGLLWLSTWTSK 158 (339)
Q Consensus 81 l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~--~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~ 158 (339)
+.|+..|......+.++.|..|.+.||......+.+..+|..++..++ ..+.+.-.|++.+....+++++..+. ..+
T Consensus 125 i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~-l~~ 203 (485)
T KOG0569|consen 125 IVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLAL-LPF 203 (485)
T ss_pred HHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHH-Hhc
Confidence 999999999999999999999999999999999999999999997776 23334556999999988887775554 446
Q ss_pred ccCCCCCCCC-CChHHHH--HH-----------------HhCCccccccCCCccHHHHhcchhHHHHH-----HHHHhhH
Q 019567 159 VTNDPCNSPF-VSKSELR--LI-----------------QAGKSDSVKKRNPPSLRHLLSKLPSWTVI-----IANITNN 213 (339)
Q Consensus 159 ~~~~~~~~~~-~~~~~~~--~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 213 (339)
.||+|+..-. ++++++. .. ++.++++.++++..++++++++|+.+.-. +....+.
T Consensus 204 ~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~ 283 (485)
T KOG0569|consen 204 LPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQF 283 (485)
T ss_pred CCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHh
Confidence 7999985221 1111110 00 00111112223556789999986654432 2222233
Q ss_pred HHHHHHHHhhhhhhhhhhCCccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhh
Q 019567 214 WGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLN 293 (339)
Q Consensus 214 ~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (339)
.+.+....|...++++ .|++..++.+.....++...+..+++.++.||.||| ++++.+..++.+..+++.
T Consensus 284 sGi~ai~~Yst~i~~~-aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRR---------pLll~~~~~~~~~~~~~~ 353 (485)
T KOG0569|consen 284 SGINAIFFYSTSIFKT-AGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRR---------PLLLISLSLMAVALLLMS 353 (485)
T ss_pred cCcceeHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc---------HHHHHHHHHHHHHHHHHH
Confidence 3456666777777777 599999999999999999999999999999999987 666666666666655554
No 83
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.94 E-value=1.5e-25 Score=201.47 Aligned_cols=274 Identities=16% Similarity=0.077 Sum_probs=178.9
Q ss_pred hhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhh-hhhcc-----hhHHHHHHH
Q 019567 7 PLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPW-AATHS-----TASLLAVRA 80 (339)
Q Consensus 7 ~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~r~ 80 (339)
.+++|+|+|+.+.|++.+.+.++..+++++.|+++||+|||+++.++..+.+++...... ..++. .....++++
T Consensus 36 ~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (420)
T PRK09528 36 WLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGI 115 (420)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456679999999999999999999999999999999999999998876665554332210 11111 111223333
Q ss_pred HHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhcc
Q 019567 81 FFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVT 160 (339)
Q Consensus 81 l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~ 160 (339)
..|.+.....+....+..+ . .+++++.++......++|..++|++++.+.+ .+|+..|++.++++++..+..+...+
T Consensus 116 ~~~~~~~~~~~~~~~~~~~-~-~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~ 192 (420)
T PRK09528 116 YLGFGFLAGAGAIEAYIER-V-SRRSGFEYGRARMWGSLGWALCAFIAGILFN-INPQINFWLGSGSALILLVLLFFAKP 192 (420)
T ss_pred HhhhhhccchhhhhhHHHH-H-HhhccccchhhHHhhhHHHHHHHHHHHHHHh-cCchHhHHHHHHHHHHHHHHHhcccc
Confidence 3343333333333333322 2 2456778889899999999999999998876 58999999988887776665555544
Q ss_pred CCCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhh---CCccch
Q 019567 161 NDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVF---NVNLKQ 237 (339)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---g~~~~~ 237 (339)
|++++.+.. +++. +++++....+.++.+|+|+++...+..+.....+.....+.|.|+.+.+ +.+..+
T Consensus 193 ~~~~~~~~~-~~~~--------~~~~~~~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (420)
T PRK09528 193 DAPSTAKVA-NALG--------ANASAVSLKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRV 263 (420)
T ss_pred cccchhhhc-cchh--------cccccccHHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHH
Confidence 443321110 0000 0011112234566888888877666555555555555667787776643 455567
Q ss_pred hhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhcccchhHH
Q 019567 238 AAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVA 301 (339)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (339)
.+.+.+...+...++.++.|++.||+++| +....+.++..+...++.+.++.+..
T Consensus 264 ~g~~~~~~~~~~~~~~~~~g~l~dr~g~~---------~~~~~~~~l~~~~~~l~~~~~~~~~~ 318 (420)
T PRK09528 264 FGYLNSFQVFLEALIMFFAPFIINRIGAK---------NALLLAGTIMAVRIIGSGFATGPLEV 318 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCcc---------hhhHHHHHHHHHHHHHHHhcccHHHH
Confidence 78888888888899999999999999976 34445555555565666655555443
No 84
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.94 E-value=3e-24 Score=195.01 Aligned_cols=327 Identities=15% Similarity=0.138 Sum_probs=204.3
Q ss_pred chhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhh-hcchHHHHHHHHHHHHHHHHHhhhhhcchhH-HHHHHHH
Q 019567 4 AVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDK-YGGKKVLAWGVALWSLSTLLTPWAATHSTAS-LLAVRAF 81 (339)
Q Consensus 4 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr-~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~r~l 81 (339)
+...+++++|.+.++.+++.+.+.....+..+++|+++|| +||||++..+.+++.++++.++ .+++... ++++|.+
T Consensus 37 l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~--~~~~~~~ll~~~~~l 114 (489)
T PRK10207 37 LAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTG--MSLLKPDLIFIALGT 114 (489)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHH--HhccchhHHHHHHHH
Confidence 4556788999999999999999998889999999999999 9999999999999999999994 4555443 5589999
Q ss_pred HHhhhhcchhhhHHHHhhhCCcc--hhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhc
Q 019567 82 FGLAEGVAMPAMSTLTSRWFPSH--ERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKV 159 (339)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~ 159 (339)
+|+|.|...|...++++|.+|++ +|+++++++..+.++|..++|.+++++.++.|||+.|++.++ +.+..++.+...
T Consensus 115 ~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i-~~~~~~~~~~~~ 193 (489)
T PRK10207 115 IAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGA-GLIIALLVYFAC 193 (489)
T ss_pred HHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHH-HHHHHHHHHHHc
Confidence 99999999999999999999876 457899999999999999999999999999999999998654 333333333333
Q ss_pred cCCCCCC---CCCChHHH-HH-------------HH--hCCcccc----------------ccCCCccHHHHhcchhHHH
Q 019567 160 TNDPCNS---PFVSKSEL-RL-------------IQ--AGKSDSV----------------KKRNPPSLRHLLSKLPSWT 204 (339)
Q Consensus 160 ~~~~~~~---~~~~~~~~-~~-------------~~--~~~~~~~----------------~~~~~~~~~~~~~~~~~~~ 204 (339)
++..++. +...+.+. .. .. .+..... .++.+ .++.+|+|.+..
T Consensus 194 ~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~~~~--~~~~~r~r~~~~ 271 (489)
T PRK10207 194 RGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNVEVANLVLIVLSIVVTIIFFREAFK--LDKTGRNKMFVA 271 (489)
T ss_pred chhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhc--CCHHHHHHHHHH
Confidence 3221111 00000000 00 00 0000000 00000 114556665544
Q ss_pred HHHH--HHhhHHHHHHHHHhhhhhhhhhhCCcc----chhhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHH
Q 019567 205 VIIA--NITNNWGYFVLLSWMPIYFNTVFNVNL----KQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQ 278 (339)
Q Consensus 205 ~~~~--~~~~~~~~~~~~~~~~~~l~~~~g~~~----~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 278 (339)
..+. .......+....+.++.+.++..+.+. -....+.....+..++..++.+++.||+++|+.......|.
T Consensus 272 ~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~-- 349 (489)
T PRK10207 272 FVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKF-- 349 (489)
T ss_pred HHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHH--
Confidence 3322 333444455555777888775322211 12233444455666678888899999999875333222222
Q ss_pred HHHhhhhhhHhhh-------hhcc---cchhHHHHHHHHHHHHhhhcccchhhhhh--hcccchhhhhhhh
Q 019567 279 SIGFIGPGVSLLC-------LNYA---KSPAVAAVLITIALSLSSFSQAGYLLNIQ--IAQDFSTALQIQQ 337 (339)
Q Consensus 279 ~~~~~~~~~~~~~-------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~~g~~~g~q 337 (339)
..++++.+++++. .... .+.++......+......+..+....... .+++.+|.++|..
T Consensus 350 ~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~ 420 (489)
T PRK10207 350 TLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMW 420 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHH
Confidence 2333333333321 1111 12333333333333333344444344444 5557788888764
No 85
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.94 E-value=4.6e-24 Score=193.68 Aligned_cols=329 Identities=12% Similarity=0.079 Sum_probs=216.1
Q ss_pred hhh-hHhH--hCCCccchhHHHHHHHHHHHHHHhhhHHHhhh-hcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHH
Q 019567 5 VVP-LAAK--FGWSSSFLGIVQSSFLWGYIFSSVIGGALVDK-YGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRA 80 (339)
Q Consensus 5 ~~~-i~~~--~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr-~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 80 (339)
+|. ++++ +|+|..+.+++.+.+.++..++++++|+++|| +|||+++.++.++.+++.++. +.+++.+.++++|.
T Consensus 33 L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~--~~~~~~~~~~~~~~ 110 (475)
T TIGR00924 33 LAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFML--AMSIYPDLIFYGLG 110 (475)
T ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHH--HhcccHhHHHHHHH
Confidence 344 4555 89999999999999999999999999999999 899999999999999999988 55788888999999
Q ss_pred HHHhhhhcchhhhHHHHhhhCCcch---hhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHh
Q 019567 81 FFGLAEGVAMPAMSTLTSRWFPSHE---RASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTS 157 (339)
Q Consensus 81 l~G~g~~~~~~~~~~~i~~~~~~~~---r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~ 157 (339)
+.|+|.|...+...++++|++|+++ |+++.++...+.++|..+||.+++++.++.|||+.|.+.++..++..+....
T Consensus 111 l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~ 190 (475)
T TIGR00924 111 TIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFA 190 (475)
T ss_pred HHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998654 8889999999999999999999999999999999999987655444333322
Q ss_pred hcc---CCCCCCCCCChHHHHHHH------------------hCCccc------------------cccCCCccHHHHhc
Q 019567 158 KVT---NDPCNSPFVSKSELRLIQ------------------AGKSDS------------------VKKRNPPSLRHLLS 198 (339)
Q Consensus 158 ~~~---~~~~~~~~~~~~~~~~~~------------------~~~~~~------------------~~~~~~~~~~~~~~ 198 (339)
..+ +.|++++..++++.+... ..+... ...++..+..+-.|
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (475)
T TIGR00924 191 GRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMTVTLAVIIFFFRLAFKPRLDAVARNK 270 (475)
T ss_pred cccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHhH
Confidence 221 222111111111100000 000000 00000011111112
Q ss_pred chhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccch----hhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHH
Q 019567 199 KLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQ----AAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVR 274 (339)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~----~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~ 274 (339)
.+.+..+.+...+....+....+.++.+.++..+.+... .+.+.+...+..++..++..++..|..+|+.......
T Consensus 271 ~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~ 350 (475)
T TIGR00924 271 MYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPL 350 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHH
Confidence 223444555555666666677777888877754443222 6678888888888888777776667766532221111
Q ss_pred HHHHHHHhhhhhhHhhhhhc---------ccchhHHHHHHHHHHHHhhhcccchhhhhh-hcc-cchhhhhhhh
Q 019567 275 KIMQSIGFIGPGVSLLCLNY---------AKSPAVAAVLITIALSLSSFSQAGYLLNIQ-IAQ-DFSTALQIQQ 337 (339)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p-~~~g~~~g~q 337 (339)
| +..+.++.++++..... ..+.++......+....-.+..+....... .+| +.+|..+|.+
T Consensus 351 k--~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~ 422 (475)
T TIGR00924 351 K--FTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMW 422 (475)
T ss_pred H--HHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHH
Confidence 1 24555555555555432 234444444444444444455555555555 655 5789888865
No 86
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.94 E-value=9.4e-25 Score=197.41 Aligned_cols=309 Identities=14% Similarity=0.092 Sum_probs=215.5
Q ss_pred chhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhh----hcch-HHHHHHHHHHHHHHHHHhhhhhcc------h
Q 019567 4 AVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDK----YGGK-KVLAWGVALWSLSTLLTPWAATHS------T 72 (339)
Q Consensus 4 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr----~G~r-~~l~~~~~~~~~~~~~~~~~~~~~------~ 72 (339)
+.+.+.+++|+|+.+.|++.++..+..++..|+.|+++|| +||| +.++.+....+++.+++ ...++ .
T Consensus 22 l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~--~~~~~~~~~~~~ 99 (437)
T TIGR00792 22 LLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLL--FTTPDFSATGKL 99 (437)
T ss_pred HHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHH--HhCCCCCcchHH
Confidence 4566788899999999999999999999999999999998 6774 46777888888887777 33443 3
Q ss_pred hHHHHHHHHHHhhhhcchhhhHHHHhhhC-CcchhhHHHHHHHHHHHHHHHHHHhHHHHhhh-------hccchHHHHHH
Q 019567 73 ASLLAVRAFFGLAEGVAMPAMSTLTSRWF-PSHERASAIGICMGGFHLGNVVGLLLTPIMLS-------TIGISGPFILF 144 (339)
Q Consensus 73 ~~~~~~r~l~G~g~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~-------~~~w~~~f~~~ 144 (339)
..+++.+++.+++.+...++..++..|.. ++++|++..++.+.+..+|..+++.+.+.+.. ..+||+.+.+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~ 179 (437)
T TIGR00792 100 VYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVL 179 (437)
T ss_pred HHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHH
Confidence 56677888899998888888888889987 46889999999999999988887776655542 45899999999
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhh
Q 019567 145 SSLGLLWLSTWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMP 224 (339)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (339)
++++++..+..+...||++++.+.. + +++.+..+.+++++++|+++...+..++..........+.+
T Consensus 180 ~~l~~~~~~~~~~~~~e~~~~~~~~---~----------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (437)
T TIGR00792 180 ALIGVVSLIICFFGTKERYSEIPKN---I----------EKKLSLKQIFKALFKNDQLLILCLAYLFYNLAFNIKNGVQV 246 (437)
T ss_pred HHHHHHHHHHHHcCCEecCCCCCcc---c----------ccCCCHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcchhh
Confidence 9888887777666667654321110 0 01111123467788999999888888887777777666677
Q ss_pred hhhhhhhCCccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhccc-chhHHHH
Q 019567 225 IYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAK-SPAVAAV 303 (339)
Q Consensus 225 ~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 303 (339)
.|.++..+ ++.+.+.+.....++.+++.++.+++.||+++| .....+..+.+++.+.+...+ +.+...+
T Consensus 247 ~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (437)
T TIGR00792 247 YYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRK---------ILFAGGILLMVLGYLIFFFAGSNLPLILV 316 (437)
T ss_pred eeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH---------HHHHHHHHHHHHHHHHHHHcchhHHHHHH
Confidence 77766555 455667777777888999999999999999875 344455555555555544433 2233333
Q ss_pred HHHHHHHHhhhcccchhhhhh-hc--------ccchhhhhhhh
Q 019567 304 LITIALSLSSFSQAGYLLNIQ-IA--------QDFSTALQIQQ 337 (339)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~-~~--------p~~~g~~~g~q 337 (339)
...+.....+...+...+... .. +++.|..+|..
T Consensus 317 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 359 (437)
T TIGR00792 317 LIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVR 359 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHH
Confidence 333333333333333333333 32 34567766654
No 87
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.94 E-value=4.7e-25 Score=183.61 Aligned_cols=310 Identities=17% Similarity=0.067 Sum_probs=207.2
Q ss_pred ccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHhhhhcchhhhHH
Q 019567 16 SSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGVAMPAMST 95 (339)
Q Consensus 16 ~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~~~~~~~~~~ 95 (339)
..-.|.+.+.|++.+.++++.+|.++||+|||+++.+++...++...+. +.++|+..++++|++.|+..| ......+
T Consensus 67 ~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~--~~S~~F~afv~aR~l~Gi~kg-nl~v~rA 143 (451)
T KOG2615|consen 67 VFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLW--ALSRNFAAFVLARFLGGIFKG-NLSVIRA 143 (451)
T ss_pred chhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHhhhhccC-chHHHHH
Confidence 3456899999999999999999999999999999999999999999988 669999777788999999977 5678999
Q ss_pred HHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhh---hccchHHHHH----HHHHHHHHHHHHHhhccCCCCCCCC
Q 019567 96 LTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLS---TIGISGPFIL----FSSLGLLWLSTWTSKVTNDPCNSPF 168 (339)
Q Consensus 96 ~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~---~~~w~~~f~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (339)
+++|.+++|+|+++++..+...++|.++||.+++++.+ ..| +.+|.. ..++...-.....+++||+-+.+++
T Consensus 144 iisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g-~~p~alP~~~v~i~a~~~v~~~~~~lpETL~~rk~ 222 (451)
T KOG2615|consen 144 IISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISG-SYPFALPCLLVFILAAGDVTFFPWFLPETLPLRKR 222 (451)
T ss_pred HHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhc-cCchHHHHHHHHHHHHHHHHHHHHhCCccccchhh
Confidence 99999999999999999999999999999999999988 222 222222 1222222133445567887555444
Q ss_pred CChHHHHHHHhCCcccc-ccCCCccHHHHhcchh-------HHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccchhhH
Q 019567 169 VSKSELRLIQAGKSDSV-KKRNPPSLRHLLSKLP-------SWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAW 240 (339)
Q Consensus 169 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~ 240 (339)
.++.. ...+....+++ .+.....-....||++ .....+-.+.+...+..+.++.+.+-.+.+|+++.+.|.
T Consensus 223 ~~~~~-~~~~~~~~~~~~~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~ 301 (451)
T KOG2615|consen 223 NDEHS-TLQEAADDRLALLKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQGK 301 (451)
T ss_pred ccccc-chhhhhhhhhhhcchhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhhee
Confidence 31111 00000000000 0000000112233332 112333444444455555555555546678999999999
Q ss_pred hhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhcccchhHHHHHHHHHHHHhhhcccchh
Q 019567 241 FSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYL 320 (339)
Q Consensus 241 ~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (339)
+.+..++.+.+.+.......||.+.. .+..+.....++...++++..............+..+......+...
T Consensus 302 vl~~tGl~m~~~ql~~~~~l~~~~~~-------~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~~A~~vt~Lt 374 (451)
T KOG2615|consen 302 VLSTTGLLMLVIQLALVPILPRYKGN-------IKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFSTASVVTCLT 374 (451)
T ss_pred eeehhhHHHHHHHHhccccccccccc-------hhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHhhHHHH
Confidence 99998888888887777777765522 23555666667777777777766665555544444444444445555
Q ss_pred hhhh--hcccchhhhhhhh
Q 019567 321 LNIQ--IAQDFSTALQIQQ 337 (339)
Q Consensus 321 ~~~~--~~p~~~g~~~g~q 337 (339)
.... ..++++|+++|+-
T Consensus 375 ~Lv~~~~~~~qrG~~~Gi~ 393 (451)
T KOG2615|consen 375 SLVHKYGPQSQRGTLNGIF 393 (451)
T ss_pred HHHHhcCCcccchHHHHHH
Confidence 5555 4558899998864
No 88
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.93 E-value=1.2e-23 Score=188.26 Aligned_cols=304 Identities=11% Similarity=0.026 Sum_probs=201.6
Q ss_pred CcchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcc-hHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHH
Q 019567 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGG-KKVLAWGVALWSLSTLLTPWAATHSTASLLAVRA 80 (339)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~-r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 80 (339)
+++.+.+++|+|.|.+|+|++.+++.++..+++++.|+++||+|| |+++.++.++.+++..+. ...++++.+.+.|+
T Consensus 23 ~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 100 (418)
T TIGR00889 23 VTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFA--AQVTTPAGMFPVLL 100 (418)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH--HHhcCHHHHHHHHH
Confidence 355677888999999999999999999999999999999999965 778888888888888887 45789999999999
Q ss_pred HHHhhhhcchhhhHHHHhhh--------CCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHH
Q 019567 81 FFGLAEGVAMPAMSTLTSRW--------FPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWL 152 (339)
Q Consensus 81 l~G~g~~~~~~~~~~~i~~~--------~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~ 152 (339)
+.|++.+...+...++..++ .....|.+..| .+|.+++|.+++.+....+|+ +|++.++..++..
T Consensus 101 l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~~~-~f~~~~~~~~~~~ 173 (418)
T TIGR00889 101 ANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIELSNI-QLYITAGSSALLG 173 (418)
T ss_pred HHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHH
Confidence 99998877777666654222 22223444444 478888898888774433454 4555565555544
Q ss_pred HHHHhhccCCCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhC
Q 019567 153 STWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFN 232 (339)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g 232 (339)
+. .+..||+|+.+++.+.+ .++..+.+.++++|+|+++...+..++..........+.+.|+++ .|
T Consensus 174 ~~-~~~~~e~~~~~~~~~~~------------~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g 239 (418)
T TIGR00889 174 VF-ALTLPDIPVAKSTAKMS------------IKVMLGLDAFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHE-FG 239 (418)
T ss_pred HH-HhcCCCCCCCccccccC------------HHHHhhhhHHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHH-hc
Confidence 43 44566664322111000 001111235678899998887777777666666666778888877 46
Q ss_pred Ccc--------chhhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhcccc-h---hH
Q 019567 233 VNL--------KQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKS-P---AV 300 (339)
Q Consensus 233 ~~~--------~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~ 300 (339)
.++ +..+...+...+..+++.+..|++.||+++| +++..+.++.++...++..... . +.
T Consensus 240 ~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r---------~~l~~~~~~~~v~~~l~~~~~~~~~~~~~ 310 (418)
T TIGR00889 240 RNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIK---------KVMLLSLVAWALRFGFFAYGDPEYFGYAL 310 (418)
T ss_pred ccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcH---------HHHHHHHHHHHHHHHHHHHcCcchhhHHH
Confidence 544 5568888888889999999999999999875 5556666666666555544321 1 11
Q ss_pred HHHHHHHHHHHhhhcccchhhhhh--hcccchhhhhhhh
Q 019567 301 AAVLITIALSLSSFSQAGYLLNIQ--IAQDFSTALQIQQ 337 (339)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~~g~~~g~q 337 (339)
.....++.....+...+....... ..++++|+.+|..
T Consensus 311 l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~ 349 (418)
T TIGR00889 311 LFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLF 349 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
Confidence 111122222222233333333333 4557788877754
No 89
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.93 E-value=3.2e-23 Score=187.96 Aligned_cols=311 Identities=16% Similarity=0.160 Sum_probs=231.9
Q ss_pred hhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhh---hhcchhHHHHHHHH
Q 019567 5 VVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWA---ATHSTASLLAVRAF 81 (339)
Q Consensus 5 ~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~r~l 81 (339)
.+-+..+..-|+...+++..+..+...+.++++|.++||++|||+++.+.++..+..+...+. -..+.+.+++.-++
T Consensus 33 ~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl 112 (524)
T PF05977_consen 33 LAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFL 112 (524)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHH
Confidence 444556677788899999999999999999999999999999999999988776655544221 12467889999999
Q ss_pred HHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhccC
Q 019567 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTN 161 (339)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~ 161 (339)
.|++.+...|.-++++.|..|+++..++.++.+...++...+||.++|.+...+|-.+.|.+.++..++........ ++
T Consensus 113 ~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~-~~ 191 (524)
T PF05977_consen 113 LGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRW-KP 191 (524)
T ss_pred HHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cc
Confidence 99999999999999999999999999999999999999999999999999998998999988776555443333332 22
Q ss_pred CCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccchhhHh
Q 019567 162 DPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWF 241 (339)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~ 241 (339)
++++++. .+ |. ..++-...++-+.++|.........++...........+|.+.++.+|.++...|++
T Consensus 192 ~~~~~~~-~~-e~----------~~~~l~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll 259 (524)
T PF05977_consen 192 PPPPSSL-PR-ER----------FFSALREGLRYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLL 259 (524)
T ss_pred ccccccc-ch-hh----------hhhhHHHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHH
Confidence 2211111 11 10 001111234556667776666555555555555566778999999999999999999
Q ss_pred hHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhcccchhHHHHHHHHHHHHhhhcccchhh
Q 019567 242 SAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLL 321 (339)
Q Consensus 242 ~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (339)
.+..+++.++|.++.+++.+|++++ .++..+.+..+++.+.+.+.++.+.....+.+.+...........+
T Consensus 260 ~a~~gvGai~Gal~~~~l~~~~~~~---------~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~~~~~~~~~t 330 (524)
T PF05977_consen 260 LAAFGVGAILGALLLPRLRRRLSSR---------RLVLLASLLFALALLLLALSPSFWLALIALFLAGAAWIIANSSLNT 330 (524)
T ss_pred HHHHHHHHHHHHHHHHHhhcccCcc---------hhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999888877654 4455666777777777887777776665555555555555555666
Q ss_pred hhh--hcccchhhhhhhh
Q 019567 322 NIQ--IAQDFSTALQIQQ 337 (339)
Q Consensus 322 ~~~--~~p~~~g~~~g~q 337 (339)
..+ ..++.+|.+++..
T Consensus 331 ~~Q~~~P~~~~GRv~si~ 348 (524)
T PF05977_consen 331 LVQLSVPDWVRGRVFSIY 348 (524)
T ss_pred HHHHhCCHHHHhHHHHHH
Confidence 666 5556799988764
No 90
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.93 E-value=2.9e-23 Score=187.80 Aligned_cols=321 Identities=13% Similarity=0.104 Sum_probs=220.4
Q ss_pred cchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHH
Q 019567 3 VAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFF 82 (339)
Q Consensus 3 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~ 82 (339)
..++.+.+|+|- ..+..|+.+.+.++.+++.++.|+++|.+|||+.++.+.++..+|++++ +.++|...++++..+.
T Consensus 65 ~~l~~I~~diG~-~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~--atA~~~~~~iag~~l~ 141 (599)
T PF06609_consen 65 SILPYINADIGG-SDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVC--ATAQNMNTFIAGMVLY 141 (599)
T ss_pred HHHHHHHHhcCC-CccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHh--hcCCcHHHHHHHHHHH
Confidence 356889999995 4678899999999999999999999999999999999999999999999 7799999999999999
Q ss_pred HhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhh-ccC
Q 019567 83 GLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSK-VTN 161 (339)
Q Consensus 83 G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~-~~~ 161 (339)
|+|.|... .....++|..|.|.|+...++.....-.....++.++..+..+.+|||.|++..+...+.+++.+++ .|+
T Consensus 142 GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~fY~PP 220 (599)
T PF06609_consen 142 GVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIFFFYFPP 220 (599)
T ss_pred HHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99977654 4566689999999998888777766656666777887777777799999999988877655544433 333
Q ss_pred CCCC-CCC-CCh-HHHHHHH---------------------hC---Cccc--------------------c---ccCCCc
Q 019567 162 DPCN-SPF-VSK-SELRLIQ---------------------AG---KSDS--------------------V---KKRNPP 191 (339)
Q Consensus 162 ~~~~-~~~-~~~-~~~~~~~---------------------~~---~~~~--------------------~---~~~~~~ 191 (339)
++++ +.+ ..+ ++..+.+ .. ..++ | ..+.+.
T Consensus 221 ~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F~~wE~~~~~~~Pl 300 (599)
T PF06609_consen 221 PRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAFVVWEWFGAPKDPL 300 (599)
T ss_pred chhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHHHHhhhhccCCCCc
Confidence 3221 111 111 1111110 00 0000 1 112333
Q ss_pred cHHHHhcch-hHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccc---hhhHhhHHhHHHHHHHHhhhhhhhHHHHHhc
Q 019567 192 SLRHLLSKL-PSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLK---QAAWFSAVPWGTMAVSGYMAGKASDSLIKAG 267 (339)
Q Consensus 192 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~ 267 (339)
-..+++|++ .+....+..+.....++....+.|+.....++-++. ..++.....+++..++..+.|.+..++++-
T Consensus 301 ~P~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~- 379 (599)
T PF06609_consen 301 FPHRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHI- 379 (599)
T ss_pred CCHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccch-
Confidence 456788874 465556677777777888888889888877776653 567777788888888889999999887653
Q ss_pred cchHHHHHHHHHHHhhhhhhHhhhhhc--ccchhHHHHHHHHHHHHhhhcccchhhhhh--hcccchhhhhh
Q 019567 268 YSLTLVRKIMQSIGFIGPGVSLLCLNY--AKSPAVAAVLITIALSLSSFSQAGYLLNIQ--IAQDFSTALQI 335 (339)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~~g~~~g 335 (339)
|+.++.+.+.+....-++.. .++....+....+.....+..........+ ..+++-|+++|
T Consensus 380 -------Kw~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~g 444 (599)
T PF06609_consen 380 -------KWQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATG 444 (599)
T ss_pred -------hHHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHH
Confidence 45555555544443333332 233333344444444444444444444444 44566777665
No 91
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.92 E-value=9.9e-23 Score=181.42 Aligned_cols=246 Identities=11% Similarity=0.027 Sum_probs=182.7
Q ss_pred cchhhhHhHhCCCccchhHHH--HHHHHHHHHHHhhhHH-HhhhhcchHHHHHHHHHH-HHHHHHHh-hhhhcc-hhHHH
Q 019567 3 VAVVPLAAKFGWSSSFLGIVQ--SSFLWGYIFSSVIGGA-LVDKYGGKKVLAWGVALW-SLSTLLTP-WAATHS-TASLL 76 (339)
Q Consensus 3 ~~~~~i~~~~~~s~~~~g~~~--s~~~~~~~i~~~~~g~-l~dr~G~r~~l~~~~~~~-~~~~~~~~-~~~~~~-~~~~~ 76 (339)
|.+|.+.+|.|.|.+++|.+. +.......+.+|+.+. ..||+||||..++...+. +....... +....+ ...++
T Consensus 22 p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (390)
T TIGR02718 22 DALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLALVGPDVAGAGWAV 101 (390)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHHcCCcchhhHHHHH
Confidence 568899999999999999974 6667778788888844 799999999876555332 21122221 111222 33444
Q ss_pred HHHHHHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHH
Q 019567 77 AVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWT 156 (339)
Q Consensus 77 ~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~ 156 (339)
..-.+.++..+...+...++..|..++++++...+....+..+|..+++...+++.++.|||..|++.+++.++..+..+
T Consensus 102 ~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~ 181 (390)
T TIGR02718 102 GLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVL 181 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 55566667777777888888889988888899999999999999999999999999999999999999988877666555
Q ss_pred hhccCCCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccc
Q 019567 157 SKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLK 236 (339)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~ 236 (339)
+..|+++++++ .+ ++...+.++.+|+|.++......++..........+.+.|++| .|++++
T Consensus 182 ~~~~~~~~~~~-~~----------------~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~ 243 (390)
T TIGR02718 182 WLKDRAVASPE-AP----------------LARRASLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLE 243 (390)
T ss_pred HcCCCCcCccc-cc----------------hhhHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHH
Confidence 44444322111 00 0011246788999988888877788777777788889999988 699999
Q ss_pred hhhHhhHHhHH-HHHHHHhhhhhhhHHHHHh
Q 019567 237 QAAWFSAVPWG-TMAVSGYMAGKASDSLIKA 266 (339)
Q Consensus 237 ~~~~~~~~~~~-~~~~~~~~~g~l~d~~~~~ 266 (339)
+.+.+...... ..+++.++.|++.||++++
T Consensus 244 ~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~ 274 (390)
T TIGR02718 244 WIGRLGMAGGAVTVLLGCGGGAWLVRRAGLW 274 (390)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 99998887765 5567789999999999876
No 92
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.92 E-value=1.7e-23 Score=192.29 Aligned_cols=262 Identities=18% Similarity=0.170 Sum_probs=195.0
Q ss_pred chhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHhhhhcchhhhHHHH
Q 019567 18 FLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGVAMPAMSTLT 97 (339)
Q Consensus 18 ~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~~~~~~~~~~~i 97 (339)
+.+|+.+.+.++..+++++.|+++|++|||++++++.+.+.++.+++ +.++|+.+++++|+++|+|.|......+.++
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~--~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~ 167 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIII--ALAPSWYQLIVGRILTGLGVGGASVLAPVYI 167 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH--HHhhhHHHHHHHHHHhccchhhhhhcchhhH
Confidence 45899999999999999999999999999999999999999999999 6689999999999999999999999999999
Q ss_pred hhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhh-ccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChHHH--
Q 019567 98 SRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLST-IGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVSKSEL-- 174 (339)
Q Consensus 98 ~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~-~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 174 (339)
+|..|++.||...+..+....+|..++..++....+. .+||..+.+..+.+++..+. ..+.||+|++.-+..+.++
T Consensus 168 sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~~L~~~g~~~~a~ 246 (513)
T KOG0254|consen 168 SEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPESPRWLIEKGRLEEAK 246 (513)
T ss_pred hhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCChHHHHHcCChHHHH
Confidence 9999999999999999999999999996665555433 58999999999888887777 7888999986332211111
Q ss_pred HHHH--hC--Ccc--------------cc-ccCCCccHHHHhc----chhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhh
Q 019567 175 RLIQ--AG--KSD--------------SV-KKRNPPSLRHLLS----KLPSWTVIIANITNNWGYFVLLSWMPIYFNTVF 231 (339)
Q Consensus 175 ~~~~--~~--~~~--------------~~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 231 (339)
+... .. +.+ +. .......++++++ ++.+....+..+.+..+......|.+.++++.
T Consensus 247 ~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~- 325 (513)
T KOG0254|consen 247 RSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSA- 325 (513)
T ss_pred HHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhc-
Confidence 0000 00 000 00 0011112344443 22233444555555556667778888887774
Q ss_pred CCccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhh
Q 019567 232 NVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLN 293 (339)
Q Consensus 232 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (339)
|.+... .......+....++..+...+.||+||| .+++.+...+.++.+++.
T Consensus 326 g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr---------~lll~s~~~m~~~~~~~~ 377 (513)
T KOG0254|consen 326 GLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRR---------KLLLFGAAGMSICLVILA 377 (513)
T ss_pred CCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccH---------HHHHHhHHHHHHHHHHHH
Confidence 665433 4445566677788888889999999875 666777777777666655
No 93
>PTZ00207 hypothetical protein; Provisional
Probab=99.91 E-value=2.6e-22 Score=182.74 Aligned_cols=329 Identities=13% Similarity=0.054 Sum_probs=229.1
Q ss_pred CcchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhh----cchhHHHH
Q 019567 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAAT----HSTASLLA 77 (339)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 77 (339)
+...|++++++|+|..+++++.+.. ......+++.|++.||+|+|+++.++.+++.+++++++++.. ++++.+++
T Consensus 47 sv~s~~L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l 125 (591)
T PTZ00207 47 NLISGAMQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSV 125 (591)
T ss_pred HHHHHHHHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHH
Confidence 3467899999999999999998874 455678888999999999999999999999999999955311 68999999
Q ss_pred HHHHHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHh
Q 019567 78 VRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTS 157 (339)
Q Consensus 78 ~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~ 157 (339)
.|++.|+|.+...+.....+.+|+| ++||++.|+...+.++|.++.+.+...+.+ .+|+..|++.+++.++..++...
T Consensus 126 ~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-~~~~~~fl~l~vl~~vv~ll~~~ 203 (591)
T PTZ00207 126 YNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS-DNTSAYFFFLMSFALVVGILAIV 203 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999996 789999999999999999865444433333 36889999999988887777777
Q ss_pred hccCCCCCC-----CCCChHHHHH--------------------------------------------------------
Q 019567 158 KVTNDPCNS-----PFVSKSELRL-------------------------------------------------------- 176 (339)
Q Consensus 158 ~~~~~~~~~-----~~~~~~~~~~-------------------------------------------------------- 176 (339)
+.++.|... ++.+++++..
T Consensus 204 ~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~v~ 283 (591)
T PTZ00207 204 FMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPLQGALVAYLKLGSNFKVGFAVTV 283 (591)
T ss_pred heeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 666554221 1111221110
Q ss_pred H------H---------h-C--C-c-c----------------cc-------c---cCCCccHHHHhcchhHHHHHHHHH
Q 019567 177 I------Q---------A-G--K-S-D----------------SV-------K---KRNPPSLRHLLSKLPSWTVIIANI 210 (339)
Q Consensus 177 ~------~---------~-~--~-~-~----------------~~-------~---~~~~~~~~~~~~~~~~~~~~~~~~ 210 (339)
. . + . + + + +. + ++...++.+.+++..+|.+....+
T Consensus 284 ~~lll~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~t~~q~l~~~d~Wll~~~~~ 363 (591)
T PTZ00207 284 IVLTVIFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDYIAPQFQETFIEGLKTARLWCLLWSIF 363 (591)
T ss_pred HHHHHHHHHHhhhHHHhccCCcCCCccccccccccccccccccccccccccccCCCCCCcchHHHHHhchhHHHHHHHHH
Confidence 0 0 0 0 0 0 0 00 0 000125667778889999999999
Q ss_pred hhHHHHHHHHHhhhhhhhhhhCCccch--hhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhH
Q 019567 211 TNNWGYFVLLSWMPIYFNTVFNVNLKQ--AAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVS 288 (339)
Q Consensus 211 ~~~~~~~~~~~~~~~~l~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (339)
+.........+.+.+..+..-|.+.++ ...+.++.++.+.+|++..|.++....+|+..+...|...+.+..+ +.+.
T Consensus 364 cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~-~~~~ 442 (591)
T PTZ00207 364 CCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSV-CIIT 442 (591)
T ss_pred HhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHH-HHHH
Confidence 998888888888888877743663333 3337789999999999999999855555442222344455555555 4444
Q ss_pred hhhhhcccchhHHHHHHHHHHHHhhhcccchhhhhh-hcccchhhhh
Q 019567 289 LLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQ-IAQDFSTALQ 334 (339)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~g~~~ 334 (339)
.+++..........+..++.+.+.|+..+....... +..++.|+..
T Consensus 443 ~lll~~~~p~~~L~~~~~lvg~~~G~~~~~~~~i~selFgk~~g~~y 489 (591)
T PTZ00207 443 MLTLFLTLPKAALPLPYFIAAFANGFMAATIALVTRTIFAKDPAKHY 489 (591)
T ss_pred HHHHHHHCCccHhHHHHHHHHHHhhHhHHHHHHHHHHHhccchHHHh
Confidence 444443332133444455556666777666666666 3337766643
No 94
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.91 E-value=6.1e-22 Score=182.79 Aligned_cols=299 Identities=15% Similarity=0.077 Sum_probs=206.1
Q ss_pred hHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHhhhhcc
Q 019567 10 AKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGVA 89 (339)
Q Consensus 10 ~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~~~~ 89 (339)
+.+..+.....+..+++.+|..+|+++.|+++||+|||++++.++++..++.+.. ++++|++.+++.|+++|++.+..
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~--a~a~~~~~~~~~Rfl~G~~~~~~ 188 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILT--AFAPNYWMFLIFRFLSGFFGSGP 188 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHH--HHhCcHHHHHHHHHHHHhhccch
Confidence 4455677788899999999999999999999999999999999999999999999 66999999999999999999999
Q ss_pred hhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCC
Q 019567 90 MPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFV 169 (339)
Q Consensus 90 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (339)
......++.|++++++|+.+..+ ......+..++++.++++.+ +||+.+++..+++.+..+. ++..||+|++...+
T Consensus 189 ~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es~rwl~~~ 264 (521)
T KOG0255|consen 189 LTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPESPRWLLSK 264 (521)
T ss_pred hHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcChHHHHHc
Confidence 99999999999999999999999 77777888888888888887 8999999999888876655 55667999864333
Q ss_pred ChHHHH-----HH-HhC--Cccc---------------cccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhh
Q 019567 170 SKSELR-----LI-QAG--KSDS---------------VKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIY 226 (339)
Q Consensus 170 ~~~~~~-----~~-~~~--~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (339)
.+.++. .. +.+ ..+. ...++...+.++++.|+.....+...+....+.....-++..
T Consensus 265 g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~gl~~~ 344 (521)
T KOG0255|consen 265 GRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGLSLN 344 (521)
T ss_pred CchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhHHHHhhhhh
Confidence 222110 00 000 0000 011122456778888765554444444433222222222222
Q ss_pred hhhhhCCccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhcccchh---HHHH
Q 019567 227 FNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPA---VAAV 303 (339)
Q Consensus 227 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 303 (339)
..+ +|.+.. ......+..........+...|+.||| .....+.....++.+...+..... ..++
T Consensus 345 ~~~-lg~~~~---~~~~~~~~~~~p~~~~~~~~~~~~gR~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (521)
T KOG0255|consen 345 VSG-LGGNIY---LNFTLSGLVELPAYFRNGLLLPEFGRR---------PPLFLSLFLAGIGLLLFGWLPDDLGGWLHWI 411 (521)
T ss_pred hhh-cCchHH---HHHHHHHHHHhhHHHHHHHHHHHhCcH---------HHHHHHHHHHHHHHHHHHHhhccchhHHHHH
Confidence 222 343332 222333336667777778888988654 666777777777777776654322 3444
Q ss_pred HHHHHHHHhhhcccchhhhhh-hcc
Q 019567 304 LITIALSLSSFSQAGYLLNIQ-IAQ 327 (339)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~-~~p 327 (339)
...++.+..+........... ..|
T Consensus 412 ~~~~~~~~~~~~~~~~~~~~~el~p 436 (521)
T KOG0255|consen 412 LPLLGKFFIGSAFNLIFLYSAELIP 436 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 455555555554444444444 444
No 95
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.89 E-value=7.6e-21 Score=173.68 Aligned_cols=144 Identities=24% Similarity=0.244 Sum_probs=123.9
Q ss_pred hhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhh-hcchHHHHHHHHHHHHHHHHHhhhhh-cchhHHHHHHHHH
Q 019567 5 VVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDK-YGGKKVLAWGVALWSLSTLLTPWAAT-HSTASLLAVRAFF 82 (339)
Q Consensus 5 ~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr-~G~r~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~r~l~ 82 (339)
...+++++|+|+++.++..+.+........++.|+++|| +|||+++..+.++.+++..+++ .+ ++.+.+.++|+++
T Consensus 45 ~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~--~~~~~~~~l~~~~~l~ 122 (500)
T PRK09584 45 AVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVA--WSGHDAGIVYMGMATI 122 (500)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHH--HhcccHHHHHHHHHHH
Confidence 455678999999999999988887767777899999999 5999999999999999998884 45 3566777899999
Q ss_pred HhhhhcchhhhHHHHhhhCCcch--hhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHH
Q 019567 83 GLAEGVAMPAMSTLTSRWFPSHE--RASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLL 150 (339)
Q Consensus 83 G~g~~~~~~~~~~~i~~~~~~~~--r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~ 150 (339)
|+|.|...+...+++.|++|+++ |..+++++..+.++|..++|.+++++.++.|||+.|.+.++..++
T Consensus 123 gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i 192 (500)
T PRK09584 123 AVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLI 192 (500)
T ss_pred HHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHH
Confidence 99999999999999999997543 556889999999999999999999999999999999997764444
No 96
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.89 E-value=3e-21 Score=160.29 Aligned_cols=311 Identities=17% Similarity=0.132 Sum_probs=220.9
Q ss_pred chhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHH
Q 019567 4 AVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFG 83 (339)
Q Consensus 4 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G 83 (339)
+.|...+..|.+..|..++......+..+++..+|..+|++|||+.+.+......+...+. ..++|+..+++.|.+.|
T Consensus 100 i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is--~~spnf~~L~~f~~l~~ 177 (528)
T KOG0253|consen 100 ILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVIS--GASPNFASLCVFRALWG 177 (528)
T ss_pred HHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhh--cCCCCeehhhHHHHHHh
Confidence 4677788889999999999999999999999999999999999999999999999999988 55999999999999999
Q ss_pred hhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhccCCC
Q 019567 84 LAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDP 163 (339)
Q Consensus 84 ~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~ 163 (339)
+|.|+ .|...++-.|..|..+|...+-.. ..+.+|.+....++.....++||||.......+..+ +....+..||+|
T Consensus 178 ~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~-~a~f~~w~~ESp 254 (528)
T KOG0253|consen 178 FGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMF-AARFLVWVYESP 254 (528)
T ss_pred ccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHH-HHHHHhhcccCc
Confidence 99999 899999999999999998887666 999999999999999999999999998888755444 444556679998
Q ss_pred CCCCCCChHHHHH------HHh--------------------------CCccccccCCCccHHHHhcc---hhHHHHHHH
Q 019567 164 CNSPFVSKSELRL------IQA--------------------------GKSDSVKKRNPPSLRHLLSK---LPSWTVIIA 208 (339)
Q Consensus 164 ~~~~~~~~~~~~~------~~~--------------------------~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 208 (339)
+-.-.+.++++.. ... +.+.+..++......+++.. ++.......
T Consensus 255 Rf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg~~~nLlsp~lrkttlllw~i 334 (528)
T KOG0253|consen 255 RFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVRGGTTNLLSPKLRKTTLLLWRI 334 (528)
T ss_pred chhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccccccchHhhcChHHHHHHHHHHHH
Confidence 7421111111000 000 00001122333445555432 233344455
Q ss_pred HHhhHHHHHHHHHhhhhhhhhhh--CC---------------cc-chhhHh-hHHhHHHHHHHHhhhhhhhHHHHHhccc
Q 019567 209 NITNNWGYFVLLSWMPIYFNTVF--NV---------------NL-KQAAWF-SAVPWGTMAVSGYMAGKASDSLIKAGYS 269 (339)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~l~~~~--g~---------------~~-~~~~~~-~~~~~~~~~~~~~~~g~l~d~~~~~~~~ 269 (339)
+|...+.+++.........+... +. .. ....+. ..+..+....|.++.+++.||+|||
T Consensus 335 wfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGRK--- 411 (528)
T KOG0253|consen 335 WFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRK--- 411 (528)
T ss_pred HHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcch---
Confidence 66666677765554444444321 00 00 011111 2244567889999999999999976
Q ss_pred hHHHHHHHHHHHhhhhhhHhhhhhcccchhHHHHHHHHHHHHhhhcccchhhhhh-hccc
Q 019567 270 LTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQ-IAQD 328 (339)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~ 328 (339)
..+..+++.+.++.+++....+......+...+-++....+...+.... +.|.
T Consensus 412 ------kTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPT 465 (528)
T KOG0253|consen 412 ------KTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPT 465 (528)
T ss_pred ------hHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccch
Confidence 6777888888888887776655544555555666666666666777666 6664
No 97
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.87 E-value=2.5e-19 Score=160.19 Aligned_cols=274 Identities=13% Similarity=0.121 Sum_probs=185.8
Q ss_pred chhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhh----hhcchHHHHHH-HHHHHHHHHHHhhhhhcchh-----
Q 019567 4 AVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVD----KYGGKKVLAWG-VALWSLSTLLTPWAATHSTA----- 73 (339)
Q Consensus 4 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~d----r~G~r~~l~~~-~~~~~~~~~~~~~~~~~~~~----- 73 (339)
.++++.+++|.++.+.+++..+..+...+.+|+.|+++| |+||||.++.+ .....++..+.+ .+++..
T Consensus 26 ~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~--~~~~~~~~~~~ 103 (477)
T TIGR01301 26 LLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIG--FAADIGHLFGD 103 (477)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHH--hCchhhhhccc
Confidence 456677899999999999999999999999999999999 59999988875 555555556653 344432
Q ss_pred ------------HHHHHHHHHHhhhhcchhhhHHHHhhhCCcchh--hHHHHHHHHHHHHHHHHHHhHHHHh--hhhc--
Q 019567 74 ------------SLLAVRAFFGLAEGVAMPAMSTLTSRWFPSHER--ASAIGICMGGFHLGNVVGLLLTPIM--LSTI-- 135 (339)
Q Consensus 74 ------------~~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~g~~~~~~l~~~l--~~~~-- 135 (339)
..+++-.+..++.....++..++++|..|+++| +.+.++.+...++|..+|+.++++. .+.+
T Consensus 104 ~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~ 183 (477)
T TIGR01301 104 NLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPF 183 (477)
T ss_pred cccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhccc
Confidence 223333344557777888899999999998755 6799999999999999999999875 2221
Q ss_pred -----------cchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhc-----c
Q 019567 136 -----------GISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLS-----K 199 (339)
Q Consensus 136 -----------~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 199 (339)
+.|..|++.++..++...+..+..+|.|..++++.+++ +.+ ++++.+....++++++ .
T Consensus 184 ~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~--~~~----~~~~~~~~~~~~~i~~~~~~mP 257 (477)
T TIGR01301 184 TKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINS--EAA----PPSKHGEEAFFGELFGAFKYLP 257 (477)
T ss_pred ccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhh--hcc----cccccchhhhHHHHHHHHHHCC
Confidence 56889999888888888888888888765322111100 000 0011111123344433 2
Q ss_pred hhHHHHHHHHHhhHHHHHHHHHhhhhhhhh-hhCCccch------h---h-HhhHHhHHHHHHHHhhhhhhhHHHHHhcc
Q 019567 200 LPSWTVIIANITNNWGYFVLLSWMPIYFNT-VFNVNLKQ------A---A-WFSAVPWGTMAVSGYMAGKASDSLIKAGY 268 (339)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~~~~~------~---~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~ 268 (339)
|.++.+++..++...+++.+..|.+.|..+ .++-++.+ . | +-.....+...+.+++..++.+|+|+|
T Consensus 258 ~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~-- 335 (477)
T TIGR01301 258 RPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAG-- 335 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--
Confidence 678889999999999999999999999874 45543321 1 1 222333344445556667777777642
Q ss_pred chHHHHHHHHHHHhhhhhhHhhhhh
Q 019567 269 SLTLVRKIMQSIGFIGPGVSLLCLN 293 (339)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (339)
|.....+.++.++++....
T Consensus 336 ------k~~~~~s~~~~~~~l~~~~ 354 (477)
T TIGR01301 336 ------KRLWGIVNIILAICLAATV 354 (477)
T ss_pred ------hhHHHHHHHHHHHHHHHHH
Confidence 3555566556665555554
No 98
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.86 E-value=9.2e-19 Score=157.16 Aligned_cols=144 Identities=15% Similarity=0.176 Sum_probs=120.6
Q ss_pred hhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhh-cchHHHHHHHHHHHHHHHHHhhhhhc-chhHHHHHHHHHHh
Q 019567 7 PLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKY-GGKKVLAWGVALWSLSTLLTPWAATH-STASLLAVRAFFGL 84 (339)
Q Consensus 7 ~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~-G~r~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~r~l~G~ 84 (339)
.+++++|.++.+.+.+.+.+.....++.+++|+++||+ ||||++.++.++..++.++. ...+ +...+.++..+.++
T Consensus 35 yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll--~~~~~~~~~~~l~l~li~i 112 (493)
T PRK15462 35 YLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVL--GASEIHPSFLYLSLAIIVC 112 (493)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHH--HHhhcchhHHHHHHHHHHH
Confidence 45678999999999999999999999999999999999 99999999999999998776 3232 22334445555666
Q ss_pred hhhcchhhhHHHHhhhCCcc--hhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHH
Q 019567 85 AEGVAMPAMSTLTSRWFPSH--ERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWL 152 (339)
Q Consensus 85 g~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~ 152 (339)
|.|...+...++++|.+|++ +|..++++...+.++|..++|.+.+++.+..||++.|.+.++..++..
T Consensus 113 G~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~l 182 (493)
T PRK15462 113 GYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGL 182 (493)
T ss_pred hcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHH
Confidence 77777788889999999875 699999999999999999999999999999999999998766444433
No 99
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.85 E-value=2.6e-19 Score=153.64 Aligned_cols=243 Identities=9% Similarity=0.009 Sum_probs=172.3
Q ss_pred hhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhh--------------
Q 019567 68 ATHSTASLLAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLS-------------- 133 (339)
Q Consensus 68 ~~~~~~~~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~-------------- 133 (339)
..++++.++++-++.|.|.+...+..+.++++..++|++++.+++.+.++++|..++|.+++.+..
T Consensus 6 ~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~ 85 (310)
T TIGR01272 6 SQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATAN 85 (310)
T ss_pred HhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhh
Confidence 357899999999999999999999999999999999999999999999999999999999988763
Q ss_pred --hccchHHHHHHHHHHHHHHHHHHhh-ccCCCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHH
Q 019567 134 --TIGISGPFILFSSLGLLWLSTWTSK-VTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANI 210 (339)
Q Consensus 134 --~~~w~~~f~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (339)
..+|+++|++.+.+..+..+.+.+. .||.+++++ +++. +++ ....++.+++|+++...+..+
T Consensus 86 ~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~~~~---~~~~----------~~~--~~~~~~~~~~~~~~l~~~~~f 150 (310)
T TIGR01272 86 AEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQEADV---ARVS----------SGD--TTQKTSAFQFTHLVLGALGIF 150 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcccc---cccc----------ccc--ccchhhHHhhHHHHHHHHHHH
Confidence 1479999997777655544433322 233211110 0000 000 011235677888988888888
Q ss_pred hhHHHHHHHHHhhhhhhhhh--hCCccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhH
Q 019567 211 TNNWGYFVLLSWMPIYFNTV--FNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVS 288 (339)
Q Consensus 211 ~~~~~~~~~~~~~~~~l~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (339)
++.....+...|.+.|+++. +|+++++.+...+....+.++++++.+++.||++++ +.+..+..+..++
T Consensus 151 ~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~---------~~l~~~~~l~~~~ 221 (310)
T TIGR01272 151 VYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQG---------RYLAFNAFLAVLL 221 (310)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH---------HHHHHHHHHHHHH
Confidence 88889999999999999864 689999999999999999999999999999999876 2334444444444
Q ss_pred hhhhhcccchhHHHHHHHHHHHHhhhcccchhhhhh-hcccchhhhhh
Q 019567 289 LLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQ-IAQDFSTALQI 335 (339)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~g~~~g 335 (339)
..+....+..... ....+.+.+.+...+...+... ..|++.++.++
T Consensus 222 ~~l~~~~~~~~~~-~~~~l~g~~~s~i~P~~~s~a~~~~~~~~~~asa 268 (310)
T TIGR01272 222 SIGAALTHGYVAM-WFVLALGLFNSIMFPTIFSLALNALGRHTSQGSG 268 (310)
T ss_pred HHHHHHcCCHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHH
Confidence 4444333333222 2333334444555555554444 55555555544
No 100
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.85 E-value=1.6e-25 Score=203.20 Aligned_cols=260 Identities=18% Similarity=0.160 Sum_probs=183.3
Q ss_pred chhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhc---chhHHHHHHHHHHhhhhcchhhhH
Q 019567 18 FLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATH---STASLLAVRAFFGLAEGVAMPAMS 94 (339)
Q Consensus 18 ~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~r~l~G~g~~~~~~~~~ 94 (339)
+.++..+...+|..+|+++.|.++||+|||+.+..+.++..+++++. +.++ |++.+.++|+++|++.|...+...
T Consensus 47 ~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~ 124 (451)
T PF00083_consen 47 LSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILI--AFAPSYNNFWMLLIGRFLIGFGIGGAYVVSP 124 (451)
T ss_pred HHHHHHHHHHhhhcccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccccccccc
Confidence 46899999999999999999999999999999999999999999999 5588 999999999999999999999999
Q ss_pred HHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhc---cchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCh
Q 019567 95 TLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTI---GISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVSK 171 (339)
Q Consensus 95 ~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~---~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (339)
.++.|..|+++|++..++.+.+..+|..++..++..+.+.. +||..+.+..+++++..+ ...+.||+|++.-.+.+
T Consensus 125 ~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~-~~~~~pESP~wL~~~~~ 203 (451)
T PF00083_consen 125 IYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLL-LRFFLPESPRWLLSKGR 203 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccccccceeccccc
Confidence 99999999999999999999999999999988876554433 499999998888876544 44678999986432222
Q ss_pred HHHHH--HHh--------CCccc------cccCCCccHHHHhcchh----HHHHHHHHHhhH-HHHHHHHHhhhhhhhhh
Q 019567 172 SELRL--IQA--------GKSDS------VKKRNPPSLRHLLSKLP----SWTVIIANITNN-WGYFVLLSWMPIYFNTV 230 (339)
Q Consensus 172 ~~~~~--~~~--------~~~~~------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~ 230 (339)
.++.. .++ ++.++ +.++.+..++++++++. ............ .+......+.+..+++
T Consensus 204 ~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~- 282 (451)
T PF00083_consen 204 DEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFEN- 282 (451)
T ss_pred ccccccccccccccccccccccccccccccccccceeeeeccccccccccccccccccccccccccccccccccccccc-
Confidence 11110 000 00000 00011134666776643 222222233332 2334445566666555
Q ss_pred hCCccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhh
Q 019567 231 FNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCL 292 (339)
Q Consensus 231 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (339)
.+.+.. -.......+...++.++..++.||+||| .+...+.....++...+
T Consensus 283 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr---------~~~i~~~~~~~~~~~~~ 333 (451)
T PF00083_consen 283 AGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRR---------KLLIIGLLLMAICSLIL 333 (451)
T ss_pred cccccc--cccccccccccccccccccccccccccc---------ccccccccccccccccc
Confidence 566655 2222344455667777888999999976 45556666655555544
No 101
>PRK09669 putative symporter YagG; Provisional
Probab=99.85 E-value=5.5e-19 Score=159.97 Aligned_cols=243 Identities=14% Similarity=0.061 Sum_probs=170.3
Q ss_pred hhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhh----hcch-HHHHHHHHHHHHHHHHHhhhhhcc------hh
Q 019567 5 VVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDK----YGGK-KVLAWGVALWSLSTLLTPWAATHS------TA 73 (339)
Q Consensus 5 ~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr----~G~r-~~l~~~~~~~~~~~~~~~~~~~~~------~~ 73 (339)
.+...+++|+|+.++|.+.++..+..++..|+.|+++|| +||| +.++.+.+..+++.++. ...++ ..
T Consensus 33 ~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~--f~~p~~~~~~~~~ 110 (444)
T PRK09669 33 AYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLT--FYTPDFGATGKII 110 (444)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHH--HhCCCCCcchHHH
Confidence 456778899999999999999999999999999999998 7774 55667777777776654 22332 35
Q ss_pred HHHHHHHHHHhhhhcchhhhHHHHhhhC-CcchhhHHHHHHHHHHHHHHHHHHhHHHHhhh-------hccchHHHHHHH
Q 019567 74 SLLAVRAFFGLAEGVAMPAMSTLTSRWF-PSHERASAIGICMGGFHLGNVVGLLLTPIMLS-------TIGISGPFILFS 145 (339)
Q Consensus 74 ~~~~~r~l~G~g~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~-------~~~w~~~f~~~~ 145 (339)
.+++..++.+.+......+..++.+|+. ++++|.+..++...+..+|..+++.+...+.. ..+|+..+.+.+
T Consensus 111 ~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ 190 (444)
T PRK09669 111 YACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMG 190 (444)
T ss_pred HHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHH
Confidence 5666677777777777777889999998 45789998898888888888887765544332 346888888888
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhh
Q 019567 146 SLGLLWLSTWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPI 225 (339)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (339)
+++++..+..++..+|+++++++ ++.+..+++++++|||+++......++............+.
T Consensus 191 ii~~v~~~~~~~~~~e~~~~~~~----------------~~~~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~y 254 (444)
T PRK09669 191 LLGVVLFFCCFFMTKERYTPEVD----------------NSSSVWKDLKLLLGNSQWRIMFIFNVVLLTAVVTRGGATLY 254 (444)
T ss_pred HHHHHHHHHHhCCeEEecCCCCc----------------CCCCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhhhe
Confidence 88777666666555554322110 11112235778899999988877777665655544444444
Q ss_pred hhhhhhCCccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHh
Q 019567 226 YFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKA 266 (339)
Q Consensus 226 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~ 266 (339)
|.+...+ +++..+.+.....+..+++.++.+++.||+++|
T Consensus 255 ~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~ 294 (444)
T PRK09669 255 YVNYVLL-RPDLATLFLVTGMIAGLFGALLSERLLGKFDRV 294 (444)
T ss_pred eeeeecC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH
Confidence 4444333 233344445555567778888999999999876
No 102
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.85 E-value=4.8e-20 Score=166.08 Aligned_cols=295 Identities=18% Similarity=0.191 Sum_probs=219.9
Q ss_pred chhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhh----hhcchH-HHHHHHHHHHHHHHHHhhhhh-c-------
Q 019567 4 AVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVD----KYGGKK-VLAWGVALWSLSTLLTPWAAT-H------- 70 (339)
Q Consensus 4 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~d----r~G~r~-~l~~~~~~~~~~~~~~~~~~~-~------- 70 (339)
..+...+.+|+++...|.+.....+..++..|+.|.++| |+|||| .++.+....+++.+++ ... +
T Consensus 24 ~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~ll--f~~~p~~~~~~~ 101 (428)
T PF13347_consen 24 LLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLL--FSPPPAGLSFTA 101 (428)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHh--hccccchhhhhh
Confidence 355677788999999999999999999999999999999 899765 5557888888877776 323 2
Q ss_pred chhHHHHHHHHHHhhhhcchhhhHHHHhhhCC-cchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhc-------cchHHHH
Q 019567 71 STASLLAVRAFFGLAEGVAMPAMSTLTSRWFP-SHERASAIGICMGGFHLGNVVGLLLTPIMLSTI-------GISGPFI 142 (339)
Q Consensus 71 ~~~~~~~~r~l~G~g~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~-------~w~~~f~ 142 (339)
....+.+..++..++......+..++..|..+ +++|.+..+.-..+..+|..+...+.+.+.+.. +|++...
T Consensus 102 ~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~ 181 (428)
T PF13347_consen 102 KLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMAL 181 (428)
T ss_pred HHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHH
Confidence 22345677777799999999999999999997 468999999999999998877776666555322 5999999
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHh
Q 019567 143 LFSSLGLLWLSTWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSW 222 (339)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (339)
+.+++.++..+...+..+|++++.++ ++++.+..+.++++++||+++......++...........
T Consensus 182 v~~iv~~v~~~i~~~~~ke~~~~~~~--------------~~~~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~ 247 (428)
T PF13347_consen 182 VLAIVGLVFFLITFFFVKERSVEVTE--------------QEKKISLRDSLRSLFRNRPFRILLLAFFLQWLAFALMNTF 247 (428)
T ss_pred HHHHHHHHHhhhhhheeeeccccccc--------------cccccccccchhhhcccchHHHHHHHHHHHHhhhhhhhhH
Confidence 99988888888777777772211111 0122233456888999999999999999988888888888
Q ss_pred hhhhhhhhhCCccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhccc--chhH
Q 019567 223 MPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAK--SPAV 300 (339)
Q Consensus 223 ~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 300 (339)
.+.|.++..|.+ ...+.+.....+..+++.++.++++||+|+| +....+..+.+++.+++.+.+ +.+.
T Consensus 248 ~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (428)
T PF13347_consen 248 LPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKK---------KVYIIGLLLAALGFLLLFFLGPGSPWL 317 (428)
T ss_pred HHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccce---------eehhhhHHHHHHHHHHHHHHHhhhHHH
Confidence 888888887766 5667777788888999999999999999876 455566666666666655554 5555
Q ss_pred HHHHHHHHHHHhhhcccchhhhhh
Q 019567 301 AAVLITIALSLSSFSQAGYLLNIQ 324 (339)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~ 324 (339)
..+...+.....+.......+...
T Consensus 318 ~~i~~~l~gi~~~~~~~~~~a~~a 341 (428)
T PF13347_consen 318 VLILFILAGIGYGAFFVIPWAMLA 341 (428)
T ss_pred HHHHHHHhHhhhcccccccccccc
Confidence 444444444444444444444444
No 103
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.84 E-value=8.7e-19 Score=159.69 Aligned_cols=248 Identities=12% Similarity=0.052 Sum_probs=173.7
Q ss_pred hhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhh----hhcc-hHHHHHHHHHHHHHHHHHhhhhhcc------hh
Q 019567 5 VVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVD----KYGG-KKVLAWGVALWSLSTLLTPWAATHS------TA 73 (339)
Q Consensus 5 ~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~d----r~G~-r~~l~~~~~~~~~~~~~~~~~~~~~------~~ 73 (339)
.....+.+|+++.++|.+..+..+.-++..|+.|+++| |+|| |+.++.+.+..+++..+. ...++ +.
T Consensus 30 ~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~ll--f~~p~~~~~~~~~ 107 (473)
T PRK10429 30 MYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLL--FSAHLFEGTAQYV 107 (473)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHH--HcCCCCCccHHHH
Confidence 44566778999999999999999999999999999999 6698 566777877777776655 22222 23
Q ss_pred HHHHHHHHHHhhhhcchhhhHHHHhhhC-CcchhhHHHHHHHHHHHHHHHHHHhHHHHhhh-------hccchHHHHHHH
Q 019567 74 SLLAVRAFFGLAEGVAMPAMSTLTSRWF-PSHERASAIGICMGGFHLGNVVGLLLTPIMLS-------TIGISGPFILFS 145 (339)
Q Consensus 74 ~~~~~r~l~G~g~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~-------~~~w~~~f~~~~ 145 (339)
.+++..++.+++......+..++..|.. ++++|.+..++...+.++|..+.+.+...+.+ ..+|+....+.+
T Consensus 108 ~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~ 187 (473)
T PRK10429 108 FVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLI 187 (473)
T ss_pred HHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHH
Confidence 4556667778888888888999999998 57899999998777777776666655443322 224666666766
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhh
Q 019567 146 SLGLLWLSTWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPI 225 (339)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (339)
++.++..+..++..||+++..+...+ ++++......++.+++||+++......++..........+.+.
T Consensus 188 ~~~~~~~~~~~~~~~e~~~~~~~~~~-----------~~~~~~~~~~~~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y 256 (473)
T PRK10429 188 AFFIVSTIITLRNVHEVYSSDNQVSA-----------EGSHLTLKDIVALIYKNDQLSCLLGMALAYNIASNIINGFAIY 256 (473)
T ss_pred HHHHHHHHHHHcCceecCCccccccc-----------cccCCCHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhheee
Confidence 66666555555555665322110000 0011112224556778999888888888777777776677776
Q ss_pred hhhhhhCCccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHh
Q 019567 226 YFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKA 266 (339)
Q Consensus 226 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~ 266 (339)
|.+...+ +....+.+.....+..+++.++.+++.||+|+|
T Consensus 257 ~~~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk 296 (473)
T PRK10429 257 YFTYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKSLSRR 296 (473)
T ss_pred EEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH
Confidence 6665433 455566666666688889999999999999976
No 104
>PRK09848 glucuronide transporter; Provisional
Probab=99.83 E-value=3.1e-18 Score=155.31 Aligned_cols=264 Identities=14% Similarity=0.049 Sum_probs=168.1
Q ss_pred hhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhh----cchHHH-HHHHHHHHHHHHHHhhhhh----cc--hh
Q 019567 5 VVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKY----GGKKVL-AWGVALWSLSTLLTPWAAT----HS--TA 73 (339)
Q Consensus 5 ~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~----G~r~~l-~~~~~~~~~~~~~~~~~~~----~~--~~ 73 (339)
.+.+++++|+++.++|.+.+...+..++..++.|+++||. ||||.. ..+.+...+..++. +... ++ ..
T Consensus 32 ~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 110 (448)
T PRK09848 32 LSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLV-FWVPTDWSHSSKVV 110 (448)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHH-HhCcCCCCcchHHH
Confidence 3567788899999999999999999999999999999996 777644 55555555444442 1111 11 22
Q ss_pred HHHHHHHHHHhhhhcchhhhHHHHhhhCC-cchhhHHHHHHHHHHH-----HHHHHHHhHHHHhhhhc--cchHHHHHHH
Q 019567 74 SLLAVRAFFGLAEGVAMPAMSTLTSRWFP-SHERASAIGICMGGFH-----LGNVVGLLLTPIMLSTI--GISGPFILFS 145 (339)
Q Consensus 74 ~~~~~r~l~G~g~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~-----~g~~~~~~l~~~l~~~~--~w~~~f~~~~ 145 (339)
..++...+.+++.+...++..++..+..+ +++|.+..++-..+.+ ++..++|.+.....+.. +|.....+.+
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~ 190 (448)
T PRK09848 111 YAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTIVLA 190 (448)
T ss_pred HHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHH
Confidence 34455667788888888888888777764 4678887766654433 44555555554332111 1211122333
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhh
Q 019567 146 SLGLLWLSTWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPI 225 (339)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (339)
+++.+..+......||+++++. +++.....+++++|||+++...+..++....+.......|.
T Consensus 191 v~~~~~~~~~~~~~~e~~~~~~-----------------~~~~~~~~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~ 253 (448)
T PRK09848 191 IAGMVLYFICFKSTRENVVRIV-----------------AQPSLKISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLF 253 (448)
T ss_pred HHHHHHHHHHHcCcEeccCCCc-----------------cCCCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhhee
Confidence 3333333333333444432111 00111224678999999999888888888888888888888
Q ss_pred hhhhhhCCccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhcc
Q 019567 226 YFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYA 295 (339)
Q Consensus 226 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (339)
|+++.+|.++...+.......++.+++.++.+++.||+++| ..+..+.++.+++.+.+.+.
T Consensus 254 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~---------~~~~~g~~~~~i~~~~~~~~ 314 (448)
T PRK09848 254 YVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKK---------NTFLIGALLGTCGYLLFFWV 314 (448)
T ss_pred eEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH---------HHHHHHHHHHHHHHHHHHHc
Confidence 99888887766555544444566778889999999999865 44455555555555554443
No 105
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.82 E-value=1.6e-17 Score=146.78 Aligned_cols=307 Identities=17% Similarity=0.133 Sum_probs=211.4
Q ss_pred cchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhc-chHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHH
Q 019567 3 VAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYG-GKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (339)
Q Consensus 3 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G-~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l 81 (339)
|..|..-++.|.|.+|+|.+.+...+...++++++|.++||.+ +||.+.+..++.++..... ...++++.+++.-++
T Consensus 23 p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~--~~~~~f~~~~~~~~l 100 (400)
T PF03825_consen 23 PYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLL--AFSSSFWWLFVIMLL 100 (400)
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHH--HHhccHHHHHHHHHH
Confidence 4456677888999999999999999999999999999999986 5777777777766665555 457889888888888
Q ss_pred HHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhH-HHHhhhhccc---hHHHHHHHHHHHHHHHHHHh
Q 019567 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLL-TPIMLSTIGI---SGPFILFSSLGLLWLSTWTS 157 (339)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l-~~~l~~~~~w---~~~f~~~~~~~~~~~~~~~~ 157 (339)
..+...+..|...++.-+... ++++-.|-.....++|..++... +..+....++ ...+++.+...++.... .+
T Consensus 101 ~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~~~-~l 177 (400)
T PF03825_consen 101 FSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLAGF-AL 177 (400)
T ss_pred HHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHH-HH
Confidence 888888888888888888774 45666677777788887777554 2333333332 34555555544443332 33
Q ss_pred hccCCCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccch
Q 019567 158 KVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQ 237 (339)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~ 237 (339)
..|+.|++++.+++ .++....+..+++|+|++....+..++..........+.+.|+++.-|.+.+.
T Consensus 178 ~lp~~~~~~~~~~~-------------~~~~~~~~~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~ 244 (400)
T PF03825_consen 178 FLPKTPPKRSAKES-------------VKKLLGLDALKLLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGST 244 (400)
T ss_pred hCCCCccccccCCC-------------cccccchHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhH
Confidence 45666532221110 11122224467999999999888888888888888999999999963477777
Q ss_pred hhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhcc-cchhHHHHHHHH----HHHHh
Q 019567 238 AAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYA-KSPAVAAVLITI----ALSLS 312 (339)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~ 312 (339)
.+.+.++..+..++.-...+++.+|++.+ .++..+.+..++=..++... ++.+.......+ =+...
T Consensus 245 ~g~~~~l~~~aEi~~f~~~~~~~~r~g~~---------~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf 315 (400)
T PF03825_consen 245 IGILWALGVVAEIPFFFFSGRFLKRFGIK---------WLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTF 315 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCHH---------HHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHH
Confidence 88877787788888888889998888865 77778888888877777766 443333333332 22233
Q ss_pred hhcccchhhhhh--hcccchhhhhhh
Q 019567 313 SFSQAGYLLNIQ--IAQDFSTALQIQ 336 (339)
Q Consensus 313 ~~~~~~~~~~~~--~~p~~~g~~~g~ 336 (339)
++.......... .+++.+++.++.
T Consensus 316 ~~~~~a~~~yi~~~~p~~~~at~Q~l 341 (400)
T PF03825_consen 316 GLFHAASVRYIDRIAPPELRATAQGL 341 (400)
T ss_pred HHHHHHHHHHHHHhCCccchHHHHHH
Confidence 333333444444 444666776664
No 106
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.82 E-value=4.5e-19 Score=160.73 Aligned_cols=320 Identities=13% Similarity=-0.032 Sum_probs=197.1
Q ss_pred cchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhc-----chHHHHHHHHHHH-HHHHHHhhhhhcchh-HH
Q 019567 3 VAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYG-----GKKVLAWGVALWS-LSTLLTPWAATHSTA-SL 75 (339)
Q Consensus 3 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G-----~r~~l~~~~~~~~-~~~~~~~~~~~~~~~-~~ 75 (339)
...|.+.+++|+|+++++...+...+...+-.+ +|.++||++ ||+.++++.++.+ +..... +..++.. ..
T Consensus 47 ~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l--~~~~~~~~~~ 123 (468)
T TIGR00788 47 PLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLL--PGKVSSAKVA 123 (468)
T ss_pred hhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhc--ccccchHHHH
Confidence 345677888999999999999999999988555 999999998 7788888876663 332222 3334543 34
Q ss_pred HHHHHHHHhhhhcchhhhHHHHhhhCCcchhhHHHH---HHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHH
Q 019567 76 LAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIG---ICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWL 152 (339)
Q Consensus 76 ~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~---~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~ 152 (339)
.+..++.+++.+...+...++..|..+ |++....+ ......++|..+++.+++.+.+.++||..|++.+.+.++..
T Consensus 124 ~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~ 202 (468)
T TIGR00788 124 AAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQL 202 (468)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHH
Confidence 458899999999999999999999998 55544333 33333458999999999999999999999999888877663
Q ss_pred HHHHhhccCCCC-CCCCCChHHHH--HHHhCCccccccCCCccHHHHhcchhHHHHHHHHHh-hHHHHHHHHHhhhhhhh
Q 019567 153 STWTSKVTNDPC-NSPFVSKSELR--LIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANIT-NNWGYFVLLSWMPIYFN 228 (339)
Q Consensus 153 ~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~ 228 (339)
....+.+|+++ ..+...+++.. ........+..++.....++.+++|.++...+..++ .......... .-.+.+
T Consensus 203 -~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~~~l~fifl~~~~~~~~~~~-~f~~~~ 280 (468)
T TIGR00788 203 -FVSNLSKERRAFVRPRIGTYLEMNMALLTLGVLANVKVQILGLRGAIQLLEIAKPLIFIFLSYANLPGASGS-VFCATT 280 (468)
T ss_pred -HHHHhcccccccccccccccchhhhhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhhcCCCCce-eEEEEc
Confidence 33445566541 11111000000 000000000001111234556778888775555554 2221111111 111333
Q ss_pred hhhCCccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhcc----------cch
Q 019567 229 TVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYA----------KSP 298 (339)
Q Consensus 229 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~ 298 (339)
+..|+++++.|......+++.+++....+++.+|++.| ..+..+.++.+++....... ++.
T Consensus 281 ~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r---------~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~ 351 (468)
T TIGR00788 281 QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYR---------LLFGVTTLLYTLSSLFDLILVKRWNLAFGISDE 351 (468)
T ss_pred ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHH---------HHHHHHHHHHHHHHhCceeeeeccccccCCCCe
Confidence 45799999999999998888888888888887777654 55555555555544332110 222
Q ss_pred hHHHHHHHHHHHHhhhcccchhhhhh--hcccchhhhhhhh
Q 019567 299 AVAAVLITIALSLSSFSQAGYLLNIQ--IAQDFSTALQIQQ 337 (339)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~~g~~~g~q 337 (339)
+.......+.....++.......... ..+++.|+.++..
T Consensus 352 ~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~ 392 (468)
T TIGR00788 352 VFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALL 392 (468)
T ss_pred eeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHH
Confidence 22222223333444455555555555 5556677776654
No 107
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.81 E-value=8.4e-20 Score=156.08 Aligned_cols=312 Identities=15% Similarity=0.129 Sum_probs=203.7
Q ss_pred CCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcc-----hhHHHHHHHHHHhhhhc
Q 019567 14 WSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHS-----TASLLAVRAFFGLAEGV 88 (339)
Q Consensus 14 ~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~r~l~G~g~~~ 88 (339)
.++...+.+..+..+|..+++++.|++.||+|||+++...++++.++++++++...++ .+++...|++.|+|.|+
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGG 160 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGG 160 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccC
Confidence 3455678899999999999999999999999999999999999999999885432222 36788999999999999
Q ss_pred chhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhh---------------ccchHHHHHHHHHHHHHHH
Q 019567 89 AMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLST---------------IGISGPFILFSSLGLLWLS 153 (339)
Q Consensus 89 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~---------------~~w~~~f~~~~~~~~~~~~ 153 (339)
-+|.+.++.+|...+++||...+...+..+.|...|.+++-.+... .-||..|-+..++++.. .
T Consensus 161 DYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~-l 239 (538)
T KOG0252|consen 161 DYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLV-L 239 (538)
T ss_pred CCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHH-H
Confidence 9999999999999999999999999888888888888777554321 12999988877666553 3
Q ss_pred HHHhhccCCCCCCCCCChHHHHHHHh---C---------CccccccCCCc---cHHHHhcc---hhHHHHHHHHHhhHHH
Q 019567 154 TWTSKVTNDPCNSPFVSKSELRLIQA---G---------KSDSVKKRNPP---SLRHLLSK---LPSWTVIIANITNNWG 215 (339)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~---------~~~~~~~~~~~---~~~~~~~~---~~~~~~~~~~~~~~~~ 215 (339)
...+..||+++.....+++.++..++ . ..++..+.+.. .+.+.+.. ++....+..+|+.-.+
T Consensus 240 y~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~~~~~~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDia 319 (538)
T KOG0252|consen 240 YFRLKMPETARYTALVSKKLKQAAGDMKKVLSVDIEAESTAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIA 319 (538)
T ss_pred HhhhcCCcchhHHHHhhcCHhhhhhccccccccccchhhccccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 44556677765431111110000000 0 00000001111 12222222 3455567788888888
Q ss_pred HHHHHHhhhhhhhhhhCCccchhhH--------hhHHhH-HHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhh
Q 019567 216 YFVLLSWMPIYFNTVFNVNLKQAAW--------FSAVPW-GTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPG 286 (339)
Q Consensus 216 ~~~~~~~~~~~l~~~~g~~~~~~~~--------~~~~~~-~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (339)
++..+.+....+++ .|+.+.+..+ ...+.. ...++|..+...++|++||+ +..+.++.++.
T Consensus 320 fy~~nL~~s~I~~~-ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk---------~iq~~GF~~~~ 389 (538)
T KOG0252|consen 320 FYGQNLFQSVIFSA-IGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRK---------YIQLMGFFIMT 389 (538)
T ss_pred hhccccHHHHHHHh-hccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhH---------HHHHhhHHHHH
Confidence 88888888888876 4666554443 111111 22334566777889999965 88888898888
Q ss_pred hHhhhhhcccch----hHHHHHHHHHHHHhhhcccch-hhhhh-hcc-cchhhhhhh
Q 019567 287 VSLLCLNYAKSP----AVAAVLITIALSLSSFSQAGY-LLNIQ-IAQ-DFSTALQIQ 336 (339)
Q Consensus 287 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~p-~~~g~~~g~ 336 (339)
+..+.+....++ ....++..+..++..+..... ..... ..| +.||+--|+
T Consensus 390 i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGI 446 (538)
T KOG0252|consen 390 IFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGI 446 (538)
T ss_pred HHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhH
Confidence 888888766542 222233333344443433332 23333 555 456665443
No 108
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.79 E-value=7.2e-21 Score=173.31 Aligned_cols=265 Identities=17% Similarity=0.173 Sum_probs=3.0
Q ss_pred CcchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhh--------------
Q 019567 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWA-------------- 67 (339)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~-------------- 67 (339)
+..+.+++++|++++++.|++.+.+-++..+..++..++.+|-.|-|.+-.|.++++++++++.+-
T Consensus 23 ~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~ 102 (539)
T PF03137_consen 23 NSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASN 102 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCccccccc
Confidence 456789999999999999999999999999999999999999999999999999999999988431
Q ss_pred ----------hh------------------------cchhHHHHHHHHHHhhhhcchhhhHHHHhhhCCcchhhHHHHHH
Q 019567 68 ----------AT------------------------HSTASLLAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGIC 113 (339)
Q Consensus 68 ----------~~------------------------~~~~~~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~ 113 (339)
.. .-+..++++.++.|+|....++.+.+++-|..++++-+..+|+.
T Consensus 103 ~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~ 182 (539)
T PF03137_consen 103 SNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGIL 182 (539)
T ss_dssp -------------------------------------------------SSS----------------------------
T ss_pred cccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhh
Confidence 00 00356889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhHHHHhhhhc----------------------cchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCh
Q 019567 114 MGGFHLGNVVGLLLTPIMLSTI----------------------GISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVSK 171 (339)
Q Consensus 114 ~~~~~~g~~~~~~l~~~l~~~~----------------------~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (339)
.+...+|.++|-.+++.+.+.+ .|..-|++.+.+.++..+..+.+.++-|+..+...+
T Consensus 183 ~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~lp~~~~~~~~ 262 (539)
T PF03137_consen 183 YAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKKLPGTSERQEE 262 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCcccccch
Confidence 9999999999999988765311 166667777877777777777665555544111111
Q ss_pred HHH---H---HHHhC-Ccc-------ccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccch
Q 019567 172 SEL---R---LIQAG-KSD-------SVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQ 237 (339)
Q Consensus 172 ~~~---~---~~~~~-~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~ 237 (339)
++. + ..+++ +++ +..++-+...+++++||.+....+..........++.+++|.|++.+++.++.+
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~ 342 (539)
T PF03137_consen 263 KESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQ 342 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Confidence 110 0 00000 000 112333456788999999999999999999999999999999999999999999
Q ss_pred hhHhhHHhHH-HHHHHHhhhhhhhHHHHHh
Q 019567 238 AAWFSAVPWG-TMAVSGYMAGKASDSLIKA 266 (339)
Q Consensus 238 ~~~~~~~~~~-~~~~~~~~~g~l~d~~~~~ 266 (339)
++.+.....+ +.++|.+++|++.+|++-+
T Consensus 343 A~~l~G~v~ip~~~~G~llGG~ivkk~kl~ 372 (539)
T PF03137_consen 343 ASLLTGIVSIPGAALGILLGGYIVKKFKLS 372 (539)
T ss_dssp ------------------------------
T ss_pred HHHHHhhhhcchhheehheEEEEEEEecCc
Confidence 9998877766 6678889999999998654
No 109
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.79 E-value=2.9e-17 Score=142.72 Aligned_cols=282 Identities=16% Similarity=0.145 Sum_probs=177.6
Q ss_pred hhhhH-hHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHH--HHHHH-Hhhh--hhcchh-HHHH
Q 019567 5 VVPLA-AKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWS--LSTLL-TPWA--ATHSTA-SLLA 77 (339)
Q Consensus 5 ~~~i~-~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~--~~~~~-~~~~--~~~~~~-~~~~ 77 (339)
.|..- ++.|+|.+|+|.+.++..+...+.+|+.|.++||+|.||-++....... .+... ..+. ...|.+ ..++
T Consensus 30 ~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n~~lg~ii 109 (412)
T PF01306_consen 30 FPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSNFWLGAII 109 (412)
T ss_dssp HHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT-HHHHHH
T ss_pred HHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34434 4589999999999999999999999999999999997776554432221 12222 1110 122322 2233
Q ss_pred HHHHHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHh
Q 019567 78 VRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTS 157 (339)
Q Consensus 78 ~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~ 157 (339)
+-+..|+......|...+++.++. ++.+.-.|-...+.++|.+++..++|.+.+ .+-+..|++....+++..++...
T Consensus 110 g~i~l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~-i~p~~~fwi~s~~~~il~lll~~ 186 (412)
T PF01306_consen 110 GGIYLGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFN-INPNIIFWIASAAAIILLLLLLL 186 (412)
T ss_dssp TTTTTTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeee-eCccHHHHHHHHHHHHHHHHHHH
Confidence 333344444445555566655553 555667788889999999999999999986 45567788766666655555555
Q ss_pred hccCCCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhh---CCc
Q 019567 158 KVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVF---NVN 234 (339)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---g~~ 234 (339)
..|+++++.+..+.++. ++++...++..+++|+|++|.+.+........+..+....+.|.++.+ +.+
T Consensus 187 ~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g 257 (412)
T PF01306_consen 187 LKPDVPPQAEVADALGA---------KKDKVSLKDVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQG 257 (412)
T ss_dssp S---SSSSS-SSTTSSS---------------HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHH
T ss_pred cCCcCchhhhhhccccc---------CCCCCcHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccC
Confidence 55554443222111110 011112234568899999999988888887888888877888877633 234
Q ss_pred cchhhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhcccchhHHHHHHHH
Q 019567 235 LKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITI 307 (339)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (339)
.+..|++.+..-+..++.-.+.+++.+|+|.| ..+.++..++.+=.....+.++.+.....=.+
T Consensus 258 ~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k---------~~Lllag~i~~iRi~~~~~~~~~~~i~~~klL 321 (412)
T PF01306_consen 258 NQMYGYLWSVQVFLEALMMFFSPWLINRIGAK---------NLLLLAGVIMAIRIIGSGFATNPWVISLIKLL 321 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH---------HHHHHHHHHHHHHHHHHHT--SHHHHHHHHHH
T ss_pred hhHHhHHHHHHHHHHHHHHHHHHHHHHhcChH---------hHHHHHHHHHHHHHHHHhhhcchHHHHHHHHH
Confidence 45577888888888888889999999999976 56666677777777777777777654444333
No 110
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.78 E-value=2e-18 Score=157.64 Aligned_cols=265 Identities=16% Similarity=0.197 Sum_probs=211.6
Q ss_pred CcchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhh------------h-
Q 019567 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWA------------A- 68 (339)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~------------~- 68 (339)
...+..+++.|++++++.|++.+.+-++..+...+..+...|..|-+.+-+|.++++++++++.+- .
T Consensus 117 ~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~ 196 (735)
T KOG3626|consen 117 NSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVI 196 (735)
T ss_pred hhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhh
Confidence 345778999999999999999999999999999999999999999999999999999999998431 0
Q ss_pred -----hc-----------------------------c--h-hHHHHHHHHHHhhhhcchhhhHHHHhhhCCcchhhHHHH
Q 019567 69 -----TH-----------------------------S--T-ASLLAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIG 111 (339)
Q Consensus 69 -----~~-----------------------------~--~-~~~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~ 111 (339)
.+ + + ..++++.++.|+|....++.+.+|+-|...+++-...+|
T Consensus 197 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlg 276 (735)
T KOG3626|consen 197 KQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLG 276 (735)
T ss_pred hccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHH
Confidence 00 0 1 256789999999999999999999999999899999999
Q ss_pred HHHHHHHHHHHHHHhHHHHhhhhc-------------------cchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChH
Q 019567 112 ICMGGFHLGNVVGLLLTPIMLSTI-------------------GISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVSKS 172 (339)
Q Consensus 112 ~~~~~~~~g~~~~~~l~~~l~~~~-------------------~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (339)
+......+|.++|-.+++++.+.+ .|..-|++.+.+.++..+..+++.++.|+..++.+.+
T Consensus 277 i~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~lp~~~~~~~~~ 356 (735)
T KOG3626|consen 277 ILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKELPKSQKRKRAR 356 (735)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccCccccccchhh
Confidence 999999999999999999876521 1667788888888888887777755555543322221
Q ss_pred HHHHHHhCCc-ccc-------ccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccchhhHhhHH
Q 019567 173 ELRLIQAGKS-DSV-------KKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAV 244 (339)
Q Consensus 173 ~~~~~~~~~~-~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~ 244 (339)
+.+..+.+.+ .++ -++-+...+++++||.+....+...+....+.++.+++|.|+++++|.++..+..+.+.
T Consensus 357 ~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~ 436 (735)
T KOG3626|consen 357 DLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGS 436 (735)
T ss_pred hhcccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhh
Confidence 1111111110 000 11223456788999999999999999999999999999999999999999999999877
Q ss_pred hHH-HHHHHHhhhhhhhHHHHHh
Q 019567 245 PWG-TMAVSGYMAGKASDSLIKA 266 (339)
Q Consensus 245 ~~~-~~~~~~~~~g~l~d~~~~~ 266 (339)
..+ +..+|.+++|++.+|+.-+
T Consensus 437 i~vp~~~~Gi~lGG~iikkfkl~ 459 (735)
T KOG3626|consen 437 IGVPAAAVGIFLGGLIIKKFKLS 459 (735)
T ss_pred hhhhhhhhhhhccceeeeeeccc
Confidence 777 5567788999999988644
No 111
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.77 E-value=1.4e-18 Score=139.76 Aligned_cols=310 Identities=17% Similarity=0.193 Sum_probs=206.3
Q ss_pred hhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhh-hcchHHHHHHHHHHHHHHHHHhh-hhhcchhHHHHHHHHH
Q 019567 5 VVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDK-YGGKKVLAWGVALWSLSTLLTPW-AATHSTASLLAVRAFF 82 (339)
Q Consensus 5 ~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr-~G~r~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~r~l~ 82 (339)
..+..+|.+++.++..++.+.|.....+..++.|++.|| +|.|..-++-+....++.++.+. ...+.+|.++.+|++.
T Consensus 67 q~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~F 146 (459)
T KOG4686|consen 67 QIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAGRFLF 146 (459)
T ss_pred hhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhheee
Confidence 345667778888899999999999999999999999996 68887777766666777776522 1368899999999999
Q ss_pred HhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchH---------HHHHHHHHHHHHHH
Q 019567 83 GLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISG---------PFILFSSLGLLWLS 153 (339)
Q Consensus 83 G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~---------~f~~~~~~~~~~~~ 153 (339)
|+|.-..-..-+++..-||..|+.+.++|+.....-+|+.+--.+.+++.+..+--. .....+.......+
T Consensus 147 GIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~~~~~~~ghT~LG~~l~~~~~tc~~sl 226 (459)
T KOG4686|consen 147 GIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMGRMFPGVGHTLLGLWLCFEVKTCKQSL 226 (459)
T ss_pred ccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHH
Confidence 999887878889999999999999999999999999998888777777776543111 11222222222221
Q ss_pred HHHhhccCCCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhc-chhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhC
Q 019567 154 TWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLS-KLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFN 232 (339)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g 232 (339)
......--. +++.|+....++. ...+...+.++.. .|++|.+.+..++.....+-+...-|.++++.+|
T Consensus 227 ical~lg~~------D~rAerilh~e~g----~~Ge~pkLtdv~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfG 296 (459)
T KOG4686|consen 227 ICALSLGLS------DDRAERILHLEEG----FLGEEPKLTDVNTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFG 296 (459)
T ss_pred HHHHHhhhh------hhHHHHHHhhhcC----cccCCcccccccccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhC
Confidence 111111000 0011111111100 0000111222222 5789999999999999999999999999999999
Q ss_pred CccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhcc-cchhHHHHHHHHHHHH
Q 019567 233 VNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYA-KSPAVAAVLITIALSL 311 (339)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 311 (339)
+|+..++.+.+.......+.+++.|.++||.|++ .+....+.+....+-..+.++ -+++.. +++.+..
T Consensus 297 lS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n--------~~wv~~a~~~tl~~H~~l~Ft~lsPy~~---m~~lGLs 365 (459)
T KOG4686|consen 297 LSAVSAGNILSTVYGISAVLSPVFGAISDKYGFN--------LWWVASACILTLLGHSGLFFTFLSPYTS---MTFLGLS 365 (459)
T ss_pred CChhhccchhhhhhhhhhhhhhhHHHhHhhhcce--------ehhHHHHHHHHHHHhhhHHhhhccHHHH---HHHHhhh
Confidence 9999999999999888999999999999999986 233333334444444444443 233332 2222223
Q ss_pred hhhcccchhhhhh-hccc-chhhhhh
Q 019567 312 SSFSQAGYLLNIQ-IAQD-FSTALQI 335 (339)
Q Consensus 312 ~~~~~~~~~~~~~-~~p~-~~g~~~g 335 (339)
........+.... +.|+ +-|+..|
T Consensus 366 ysllAcslWP~va~~vpE~qLGTayg 391 (459)
T KOG4686|consen 366 YSLLACSLWPCVASLVPEEQLGTAYG 391 (459)
T ss_pred HHHHHHHHhhhhhhhCCHHHhcchHH
Confidence 3333333555555 5554 4455444
No 112
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.77 E-value=9.4e-16 Score=138.08 Aligned_cols=305 Identities=16% Similarity=0.049 Sum_probs=210.0
Q ss_pred chhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHH-HHHHHHHHHHHhhhhhcchhHHHHHHHHHHhhhhcchhhhHHH
Q 019567 18 FLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWG-VALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGVAMPAMSTL 96 (339)
Q Consensus 18 ~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~~~~~~~~~~~ 96 (339)
..++..++..+..++..|+.|.++|+-|+||.++.. ..+..+.+....+...++++...+.-++.-++.+.......++
T Consensus 71 ~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~ 150 (477)
T PF11700_consen 71 LWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAY 150 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346778888999999999999999999877665554 4444555555533223445555566666667777788888999
Q ss_pred HhhhCCcchh--------------------------hHHHHHHHHHHHHHHHHHHhHHHHhhhh--------ccchHHHH
Q 019567 97 TSRWFPSHER--------------------------ASAIGICMGGFHLGNVVGLLLTPIMLST--------IGISGPFI 142 (339)
Q Consensus 97 i~~~~~~~~r--------------------------~~~~~~~~~~~~~g~~~~~~l~~~l~~~--------~~w~~~f~ 142 (339)
+.|..+++++ ++..+.-.....+|.++.-.+.-.+... .+-|..+.
T Consensus 151 LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~ 230 (477)
T PF11700_consen 151 LPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFL 230 (477)
T ss_pred hHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHH
Confidence 9999988877 8888888888888888877766444321 23588888
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHh
Q 019567 143 LFSSLGLLWLSTWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSW 222 (339)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (339)
+.++.-++..+..++..||+|+.++.......-.. .-++-...++++.|.|+.....+..++..-+.......
T Consensus 231 ~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~-------g~~~l~~t~k~~~~~~~~~~fLia~~l~~dg~~ti~~~ 303 (477)
T PF11700_consen 231 IVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRF-------GFKRLWRTFKEIRKLRQLFLFLIAYFLYSDGVNTIISF 303 (477)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHH-------HHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888888888888763221111110000 01111235677777888999999999999999999999
Q ss_pred hhhhhhhhhCCccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhh-hhHhhhhh-------c
Q 019567 223 MPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGP-GVSLLCLN-------Y 294 (339)
Q Consensus 223 ~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-------~ 294 (339)
...|.++++|++..+...+.....+.+++|.++.|++.||+|.| ++..+..+.... .++...+. -
T Consensus 304 ~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k-------~~~~l~~~l~~~~~i~~~g~~G~~~~~~g 376 (477)
T PF11700_consen 304 AGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPK-------TKRTLLISLILWIIIPLYGLFGFWPSFFG 376 (477)
T ss_pred HHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-------hhHHHHHHHHHHHHHHHHHHHHhhhcccC
Confidence 99999999999999999999999999999999999999999976 333333333333 22222222 0
Q ss_pred ccchhHHHHHHHHHHHHhhhcccchhhhhh-hc-ccchhhhhhh
Q 019567 295 AKSPAVAAVLITIALSLSSFSQAGYLLNIQ-IA-QDFSTALQIQ 336 (339)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-p~~~g~~~g~ 336 (339)
..+.+..++..++.+.+.+...+..-+... +. |++.+...|.
T Consensus 377 ~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgl 420 (477)
T PF11700_consen 377 LKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGL 420 (477)
T ss_pred cccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHH
Confidence 234444445455555555555555555666 44 4556665554
No 113
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.76 E-value=5.4e-16 Score=132.61 Aligned_cols=308 Identities=11% Similarity=0.065 Sum_probs=210.0
Q ss_pred hhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhc-----chHH-HHHHHHHHHHHHHHHhhh---hhc-------
Q 019567 7 PLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYG-----GKKV-LAWGVALWSLSTLLTPWA---ATH------- 70 (339)
Q Consensus 7 ~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G-----~r~~-l~~~~~~~~~~~~~~~~~---~~~------- 70 (339)
.+..|++++..-.+...+...+.. ...+..|+.+|+.+ ||.. +..|.+....+..+.+++ .+.
T Consensus 5 VMIvEL~vpA~lv~~lval~~~~a-p~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~ 83 (403)
T PF03209_consen 5 VMIVELGVPAWLVALLVALHYLVA-PLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSG 83 (403)
T ss_pred hHHHHhccHHHHHHHHHHHHHHHH-HHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHccccccccc
Confidence 467899999998999988888765 57999999999999 7754 455666666666665442 122
Q ss_pred ch----hHHHHHHHHHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHH---
Q 019567 71 ST----ASLLAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFIL--- 143 (339)
Q Consensus 71 ~~----~~~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~--- 143 (339)
+. ......-.+.|+|.+...++..++++|..|+|+|+++.++.....-+|.+++..+.+.+.+.++-.-..-+
T Consensus 84 ~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~ 163 (403)
T PF03209_consen 84 PFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQG 163 (403)
T ss_pred ccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHH
Confidence 22 13345567789999999999999999999999999999999999999999999999988887763332222
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhh
Q 019567 144 FSSLGLLWLSTWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWM 223 (339)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (339)
.+++.+...++..+- .|++..+.... +++++......+++++.+|+........++....++.-...+
T Consensus 164 ~a~i~~~l~~ia~wg-~E~r~~~~~~~-----------~~~~~~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~~QD~iL 231 (403)
T PF03209_consen 164 VALIALLLNLIALWG-QEPRRSRRAAA-----------AERPRPPFREAWRQVWASPQARRFFVFLFLGTLAFFMQDVIL 231 (403)
T ss_pred HHHHHHHHHHHHHHh-cccCCcccccC-----------CCCCCccHHHHHHHHHhCCChhHHHHHHHHHHHHHHhhHHHc
Confidence 222222222222222 22222111100 011222233467888889999988888888889999989999
Q ss_pred hhhhhhhhCCccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhh---cccchhH
Q 019567 224 PIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLN---YAKSPAV 300 (339)
Q Consensus 224 ~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 300 (339)
-+|--|++|+++.+...+....+.+..++-...|++..|-.++ +.....++...+.++.++. ...+.+.
T Consensus 232 EPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~--------~~~a~~G~~~~~~~f~lii~a~~~~~~~~ 303 (403)
T PF03209_consen 232 EPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGK--------KRTAALGCLLGALAFALIILAGPLGSPWL 303 (403)
T ss_pred CCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCc--------hHHHHHHHHHHHHHHHHHHHHHhcccchH
Confidence 9999999999999999999999999999999999887742221 1233345555554444433 3344444
Q ss_pred HHHHHHHHHHHhhhcccchhhhhh--hcccchhhhhh
Q 019567 301 AAVLITIALSLSSFSQAGYLLNIQ--IAQDFSTALQI 335 (339)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~~g~~~g 335 (339)
......+.+...+.+..+..+.+. ..+++.|..+|
T Consensus 304 ~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG 340 (403)
T PF03209_consen 304 FRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMG 340 (403)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHH
Confidence 444444444445555544444444 66788887665
No 114
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.75 E-value=2.1e-16 Score=135.51 Aligned_cols=253 Identities=18% Similarity=0.160 Sum_probs=196.1
Q ss_pred CcchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhh----cchh--HH
Q 019567 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAAT----HSTA--SL 75 (339)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~----~~~~--~~ 75 (339)
+++.....+-++ +....-|+.-+|++.+....+++-|+.||+|-|....++..+-++|..+--.+.. +.++ ..
T Consensus 65 a~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~ 143 (480)
T KOG2563|consen 65 APINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLT 143 (480)
T ss_pred hhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhh
Confidence 344455666677 7777889999999999999999999999999999999999999999998733222 2334 66
Q ss_pred HHHHHHHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhc------cchH--HHHHHHHH
Q 019567 76 LAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTI------GISG--PFILFSSL 147 (339)
Q Consensus 76 ~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~------~w~~--~f~~~~~~ 147 (339)
..+..+.+.++-.....-..+...||++++|..+..+-..++.+|.+++-++...+..+- .|.. .|+..+++
T Consensus 144 ~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l 223 (480)
T KOG2563|consen 144 HTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECL 223 (480)
T ss_pred HHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHH
Confidence 788999999988887777888899999999999999999999999999988887776533 4554 35655666
Q ss_pred HHHHHHHHHhhccCCCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhh
Q 019567 148 GLLWLSTWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYF 227 (339)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 227 (339)
+.+.+++..+..+++|+.++.......+ +.+-..+.++.++|+++....+++......+++..+.+-.-+
T Consensus 224 ~~l~l~l~~~~~~~~P~tPps~s~~~~~----------~~~f~~si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l 293 (480)
T KOG2563|consen 224 AALLLALVLFVFTKKPPTPPSASQAALQ----------DASFPKSIKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLAL 293 (480)
T ss_pred HHHHHHHHHHhcCCCCCCCCchhHhhhh----------cCcHHHHHHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhcc
Confidence 6555566666666666555443322211 112334678899999999998888888888887777776566
Q ss_pred hhhhCCccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHh
Q 019567 228 NTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKA 266 (339)
Q Consensus 228 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~ 266 (339)
.. .|++...+|+......+++++++.+.|.+.||.++-
T Consensus 294 ~~-sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~f 331 (480)
T KOG2563|consen 294 CP-SGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKF 331 (480)
T ss_pred cc-ccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhH
Confidence 55 488888999999999999999999999999998654
No 115
>PRK11462 putative transporter; Provisional
Probab=99.75 E-value=1.9e-15 Score=136.98 Aligned_cols=242 Identities=15% Similarity=0.092 Sum_probs=171.4
Q ss_pred hhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhh----hcchH-HHHHHHHHHHHHHHHHhhhhhcc------hh
Q 019567 5 VVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDK----YGGKK-VLAWGVALWSLSTLLTPWAATHS------TA 73 (339)
Q Consensus 5 ~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr----~G~r~-~l~~~~~~~~~~~~~~~~~~~~~------~~ 73 (339)
.....+.+|+++..+|.+..+.-+--++..|+.|+++|| +|||| .++++....+++.+++ ...++ ..
T Consensus 33 ~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~ll--f~~p~~s~~~~~~ 110 (460)
T PRK11462 33 MFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLA--YSTPDLSMNGKMI 110 (460)
T ss_pred HHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHH--HhCCCCCcchHHH
Confidence 344567789999999999999999999999999999995 68864 5556767777777665 32332 34
Q ss_pred HHHHHHHHHHhhhhcchhhhHHHHhhhCC-cchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhc-------cchHHHHHHH
Q 019567 74 SLLAVRAFFGLAEGVAMPAMSTLTSRWFP-SHERASAIGICMGGFHLGNVVGLLLTPIMLSTI-------GISGPFILFS 145 (339)
Q Consensus 74 ~~~~~r~l~G~g~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~-------~w~~~f~~~~ 145 (339)
.+.+.-++..++......+-.++..|..+ +++|.+..++...+..+|..+++.+...+.+.. +|+....+.+
T Consensus 111 y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ 190 (460)
T PRK11462 111 YAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLS 190 (460)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHH
Confidence 45666777788888888889999999986 678999999999999999888887765554433 5777777777
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhh
Q 019567 146 SLGLLWLSTWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPI 225 (339)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (339)
++.++.....+...+|++++++. +....+.++.+++||.++......++..............
T Consensus 191 ii~~i~~~i~~~~~kE~~~~~~~-----------------~~~~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y 253 (460)
T PRK11462 191 VVAFMMLAFCFFTTKERVEAPPT-----------------TTSMREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMY 253 (460)
T ss_pred HHHHHHHHHHHhcceeccCCCcc-----------------CCCHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhh
Confidence 77666665555555554322110 0011224677888998887766666665555554444454
Q ss_pred hhhhhhCCccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHh
Q 019567 226 YFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKA 266 (339)
Q Consensus 226 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~ 266 (339)
|.+...|. +...+.+.....++++++.++++++.||+++|
T Consensus 254 ~~~y~~g~-~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk 293 (460)
T PRK11462 254 YVTWILGT-PEVFVAFLTTYCVGNLIGSALAKPLTDWKCKV 293 (460)
T ss_pred hhhhhcCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH
Confidence 54444443 33344556677788888999999999999875
No 116
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.74 E-value=1.7e-15 Score=133.04 Aligned_cols=295 Identities=18% Similarity=0.171 Sum_probs=220.1
Q ss_pred hhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhh----hcc-hHHHHHHHHHHHHHHHHHhhhhhcc------hhHH
Q 019567 7 PLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDK----YGG-KKVLAWGVALWSLSTLLTPWAATHS------TASL 75 (339)
Q Consensus 7 ~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr----~G~-r~~l~~~~~~~~~~~~~~~~~~~~~------~~~~ 75 (339)
...+.+|+++..+|.+..+--+--++..|+.|.++|| +|| |+.++.+.+..++.+.++ ..+++ ....
T Consensus 38 fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~--F~~p~~~~~~k~~ya 115 (467)
T COG2211 38 FYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLL--FITPDFSMTGKLIYA 115 (467)
T ss_pred HHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHH--HcCCCcccCcchHHH
Confidence 3456689999999999999999999999999999995 776 456777878888888887 44553 3456
Q ss_pred HHHHHHHHhhhhcchhhhHHHHhhhCC-cchhhHHHHHHHHHHHHHHHHHHhHHHHhhh-------hccchHHHHHHHHH
Q 019567 76 LAVRAFFGLAEGVAMPAMSTLTSRWFP-SHERASAIGICMGGFHLGNVVGLLLTPIMLS-------TIGISGPFILFSSL 147 (339)
Q Consensus 76 ~~~r~l~G~g~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~-------~~~w~~~f~~~~~~ 147 (339)
++...+.+++......+-.++.+|..+ ++||.+..++-..+.++|..+...+...+.. ..||+..-.+.+++
T Consensus 116 ~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi 195 (467)
T COG2211 116 LVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVI 195 (467)
T ss_pred HHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHH
Confidence 677889999999999999999999984 5789999999999999997777666655543 34788888888888
Q ss_pred HHHHHHHHHhhccCCCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhh
Q 019567 148 GLLWLSTWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYF 227 (339)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 227 (339)
..+..+.+++-.+|++.+....++. .+++...++..+++||++...++...+.........+....|.
T Consensus 196 ~~i~~l~~~~~v~ER~~~~~~~~~~------------~~~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~ 263 (467)
T COG2211 196 GVILLLFCFFNVKERVVETQPTKTG------------VKLKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYV 263 (467)
T ss_pred HHHHHHHHHHHhhcccCccccCccc------------ccccHHHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeE
Confidence 8888888888877776532211110 1111122345688999999988888888888888888888888
Q ss_pred hhhhCCccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhccc--chhHHHHHH
Q 019567 228 NTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAK--SPAVAAVLI 305 (339)
Q Consensus 228 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 305 (339)
+...|.+.............+.+++.++..++.+|+|+| .....+.++..++.+.+.+.+ +.....+..
T Consensus 264 ~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk---------~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~ 334 (467)
T COG2211 264 TYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKK---------KLFLIGLLLLAVGYLLLYFTPAGSVVLIVVAL 334 (467)
T ss_pred EEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchH---------HHHHHHHHHHHHHHHHHHhhcCcchHHHHHHH
Confidence 888888877777777777777788899999999999976 556666777777776666655 333334443
Q ss_pred HHHHHHhhhcccchhhhhh
Q 019567 306 TIALSLSSFSQAGYLLNIQ 324 (339)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~ 324 (339)
++.....+...+..++...
T Consensus 335 ~i~~~g~~~~~~l~wam~~ 353 (467)
T COG2211 335 IIAGVGTGIANPLPWAMVA 353 (467)
T ss_pred HHHHHHhhccccccHHHhc
Confidence 4444555555555555555
No 117
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.74 E-value=1.1e-15 Score=133.33 Aligned_cols=153 Identities=18% Similarity=0.302 Sum_probs=133.4
Q ss_pred chhhhHhHhC----CCccchhHHHHHHHHHHHHHHhhhHHHhhhh-cchHHHHHHHHHHHHHHHHHhhhhh--cchhHHH
Q 019567 4 AVVPLAAKFG----WSSSFLGIVQSSFLWGYIFSSVIGGALVDKY-GGKKVLAWGVALWSLSTLLTPWAAT--HSTASLL 76 (339)
Q Consensus 4 ~~~~i~~~~~----~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~-G~r~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~ 76 (339)
+.-++..+++ .|+++..-+.+.|..-..+...++|+++||+ |+|+++..|.++..+|.+.. +.+ .+...+.
T Consensus 44 L~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L--~~~~~~~~~gl~ 121 (498)
T COG3104 44 LILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVL--AISSVSGPGGLY 121 (498)
T ss_pred HHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHH--hccccccccHHH
Confidence 3445566666 9999999999999988889999999999997 99999999999999999998 445 4688899
Q ss_pred HHHHHHHhhhhcchhhhHHHHhhhCCcc--hhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHH
Q 019567 77 AVRAFFGLAEGVAMPAMSTLTSRWFPSH--ERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLST 154 (339)
Q Consensus 77 ~~r~l~G~g~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~ 154 (339)
++-.+.++|.|..-+...++++|.+|++ +|-..++++..+.++|+.++|.+.+++.+++||+..|-..++-..+.++.
T Consensus 122 i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~ 201 (498)
T COG3104 122 IGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVI 201 (498)
T ss_pred HHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999864 47778899999999999999999999999999999999988777665555
Q ss_pred HHhh
Q 019567 155 WTSK 158 (339)
Q Consensus 155 ~~~~ 158 (339)
.+..
T Consensus 202 f~~~ 205 (498)
T COG3104 202 FLLG 205 (498)
T ss_pred HHHc
Confidence 5443
No 118
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.73 E-value=5.6e-17 Score=122.64 Aligned_cols=137 Identities=26% Similarity=0.445 Sum_probs=122.6
Q ss_pred HHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhCC
Q 019567 23 QSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGVAMPAMSTLTSRWFP 102 (339)
Q Consensus 23 ~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~~~~~~~~~~~i~~~~~ 102 (339)
.+.+.++..+++++.|++.||+|||+.+..+..+..++.+.. ...++++.+.+.+++.|++.+...+....++.|.+|
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 81 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMF--ALSSNITVLIIARFLQGFGAAFALVAGAALIADIYP 81 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHH--HHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCC
Confidence 345677888999999999999999999999999998888887 457899999999999999999999999999999999
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhccC
Q 019567 103 SHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTN 161 (339)
Q Consensus 103 ~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~ 161 (339)
+++|++..++.+....+|..++|.+.+.+.+..+|++.|++.+...++..+..+...||
T Consensus 82 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 82 PEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 99999999999999999999999999999999999999999888877766666655554
No 119
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.70 E-value=2.5e-14 Score=120.62 Aligned_cols=240 Identities=15% Similarity=0.134 Sum_probs=171.4
Q ss_pred cchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHH
Q 019567 3 VAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFF 82 (339)
Q Consensus 3 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~ 82 (339)
|-+-.+-+++|.++.|++.+....+....+..++.|.++||+|||+.-+.-+++.+++++.. ..+|++.++++|++.
T Consensus 55 pY~Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k---~~~~~~~L~~GRvlg 131 (354)
T PF05631_consen 55 PYLYALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTK---HSSNYPVLLLGRVLG 131 (354)
T ss_pred chhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH---hccccHHHHHHHHHH
Confidence 33445567899999999999999999999999999999999999999999999999988754 479999999999999
Q ss_pred HhhhhcchhhhHHHH-hhh----CCcchhhHHHHHHH-HHHHHHHHHHHhHHHHhhhhccc--hHHHHHHHHHHHHHHHH
Q 019567 83 GLAEGVAMPAMSTLT-SRW----FPSHERASAIGICM-GGFHLGNVVGLLLTPIMLSTIGI--SGPFILFSSLGLLWLST 154 (339)
Q Consensus 83 G~g~~~~~~~~~~~i-~~~----~~~~~r~~~~~~~~-~~~~~g~~~~~~l~~~l~~~~~w--~~~f~~~~~~~~~~~~~ 154 (339)
|++....+..-.++. .|. +|++..+.-++... ..+++-.+.+..++.++.+..+. ..+|....++..+..++
T Consensus 132 GiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~ 211 (354)
T PF05631_consen 132 GIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVL 211 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHH
Confidence 999999988888775 443 22233344444334 33444556666677777776654 78888877777776666
Q ss_pred HHhhccCCCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHH-HhhhhhhhhhhCC
Q 019567 155 WTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLL-SWMPIYFNTVFNV 233 (339)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~g~ 233 (339)
....-+|+..+..+..+.. +.....++.+.+||+++.+.++..+.-..++.+. .|.|..- . +-
T Consensus 212 I~~~W~ENyg~~~~~~~~~-------------~~~~~a~~~i~~d~ril~LG~~qslFE~smy~FVflWtPaL~-~--~~ 275 (354)
T PF05631_consen 212 ILKTWPENYGDTSSSSSLS-------------GSFREAWRAILSDPRILLLGLIQSLFEGSMYLFVFLWTPALD-P--DD 275 (354)
T ss_pred HHhcccccCCCcccccchH-------------HHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHheeeeeceec-C--CC
Confidence 5555556544322111100 1111245678889999999999998888887766 4566543 2 11
Q ss_pred ccchhhHhhHHhHHHHHHHHhhhhhhhH
Q 019567 234 NLKQAAWFSAVPWGTMAVSGYMAGKASD 261 (339)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d 261 (339)
+...-|++++.+....++|+.+..++..
T Consensus 276 ~~~P~GlIFssFM~a~MlGS~lf~~l~s 303 (354)
T PF05631_consen 276 EELPLGLIFSSFMVAMMLGSSLFSRLLS 303 (354)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHh
Confidence 2335788888888888888877765544
No 120
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.69 E-value=2e-15 Score=135.41 Aligned_cols=161 Identities=18% Similarity=0.207 Sum_probs=134.5
Q ss_pred hhhHhHhCCCc--------cchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhc---chhH
Q 019567 6 VPLAAKFGWSS--------SFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATH---STAS 74 (339)
Q Consensus 6 ~~i~~~~~~s~--------~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~---~~~~ 74 (339)
|...+|.|.++ .+.+...+...++..++.++.|+++||+|+|+++..+.++..++..+.... .+ +.+.
T Consensus 232 ~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~-~~~~~~~~~ 310 (418)
T TIGR00889 232 NGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYG-DPEYFGYAL 310 (418)
T ss_pred HHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHc-CcchhhHHH
Confidence 34445666443 566899999999999999999999999999999999999988887666331 22 2456
Q ss_pred HHHHHHHHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHH-HHHHHHHHHHHhHHHHhhhh------ccchHHHHHHHHH
Q 019567 75 LLAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICM-GGFHLGNVVGLLLTPIMLST------IGISGPFILFSSL 147 (339)
Q Consensus 75 ~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~~~~l~~~l~~~------~~w~~~f~~~~~~ 147 (339)
+++.+++.|++.+...+....++.|++|+++|++++|+.+ ...++|..+||.+++.+.++ +||+..|.+.++.
T Consensus 311 l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~ 390 (418)
T TIGR00889 311 LFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGY 390 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHH
Confidence 7788999999999888999999999999999999999997 67889999999999999987 4699999999988
Q ss_pred HHHHHHHHHhhccCCCCCCC
Q 019567 148 GLLWLSTWTSKVTNDPCNSP 167 (339)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~ 167 (339)
.++..++.+++.+|+.++.+
T Consensus 391 ~~i~~~l~~~~~~~~~~~~~ 410 (418)
T TIGR00889 391 IAILAVLFMIFFKYSHNAIK 410 (418)
T ss_pred HHHHHHHHHHHhCCcccCCC
Confidence 88888888888887755443
No 121
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.67 E-value=4.6e-15 Score=132.25 Aligned_cols=293 Identities=17% Similarity=0.118 Sum_probs=207.8
Q ss_pred HHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHhhh--hcchhhhHHHHhhhCCcc
Q 019567 27 LWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAE--GVAMPAMSTLTSRWFPSH 104 (339)
Q Consensus 27 ~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~--~~~~~~~~~~i~~~~~~~ 104 (339)
.+...+.++..|.++||+|||..+........+..+...+ ..+|.++ +.|+.. +.......++++|....+
T Consensus 72 ~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~---~~~~~~~----~~~l~g~~~~~~s~~~a~vadis~~~ 144 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLF---QGYWFFL----LLGLSGGFSAIFSVGFAYVADISSEE 144 (463)
T ss_pred HHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHH---HHHHHhh----hcccccchhhhhhhhhhheeeccchh
Confidence 5777899999999999999999999999888888877633 3344333 554433 446677889999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChHHHHHHHhCCccc
Q 019567 105 ERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVSKSELRLIQAGKSDS 184 (339)
Q Consensus 105 ~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (339)
+|...+|+.+.....+..++|.+++.+.+..|.-.+|.+..+..++..+....++||+..++++.+..............
T Consensus 145 ~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~~~~~~~~~~ 224 (463)
T KOG2816|consen 145 ERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLRELTPGSLDSS 224 (463)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCccccccccccccCCCcccch
Confidence 99999999999999999999999999999999999999999999888888888889887665443200000000000000
Q ss_pred cccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHH-hhhhhhhhhhCCccchhhHhhHHhHHHHHHHHhhhh-hhhHH
Q 019567 185 VKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLS-WMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAG-KASDS 262 (339)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g-~l~d~ 262 (339)
...+..+..+..-.+|..+.+....++.......-.. ..+.|++..++++.++.+.+.+..++...+++++.. .+...
T Consensus 225 ~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~ 304 (463)
T KOG2816|consen 225 HVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSI 304 (463)
T ss_pred hhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111111222222345555555555555544433233 557888888999999999999999999999987666 66666
Q ss_pred HHHhccchHHHHHHHHHHHhhhhhhHhhhhhcccchhHHHHHHHHHHHHhhhcccchhhhhh--hcccchhhhhhh
Q 019567 263 LIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQ--IAQDFSTALQIQ 336 (339)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~~g~~~g~ 336 (339)
++.+ .....+...-.+....+.+....|..+..... ..+.....+...+... +.++++|.++++
T Consensus 305 l~~~---------~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~-~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~ 370 (463)
T KOG2816|consen 305 LGEK---------RLISLGLLSEFLQLLLFAFATETWMMFAAGVV-VALAGIVFPAIRAFASILVSPEEQGKVFGI 370 (463)
T ss_pred Hhhh---------hHhhHHHHHHHHHHHHHHHhccchhhhHHHHH-HHhhcchhHHHHhHHHhhcccccccchhhH
Confidence 7665 47788999999999999988887765554433 3344445555555555 777888887764
No 122
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.64 E-value=1.8e-14 Score=128.76 Aligned_cols=155 Identities=20% Similarity=0.200 Sum_probs=130.2
Q ss_pred hhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHhh
Q 019567 6 VPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLA 85 (339)
Q Consensus 6 ~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g 85 (339)
|...++.|. .+.++..+.+.++..++.++.|++.||+|+|+.+..+..+..++.++. ...+|.+.+++.+++.|++
T Consensus 240 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~G~~ 315 (399)
T PRK05122 240 TLYYAARGW--DGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLL--WLAPSPWMALIGAALTGFG 315 (399)
T ss_pred HHHHHHccc--ccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH--HHhccHHHHHHHHHHHHHh
Confidence 444455555 345677788889999999999999999999999999888888887777 4478888888999999999
Q ss_pred hhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhccCCCC
Q 019567 86 EGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPC 164 (339)
Q Consensus 86 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~ 164 (339)
.+...+.....+.|..|+++|++++++++....+|..+++++.+.+.+..||+..|++.++..++..+..+...+++++
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (399)
T PRK05122 316 FSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRRAPR 394 (399)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 9988888888888999999999999999999999999999999999999999999999888877766666655444443
No 123
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.63 E-value=6.5e-14 Score=119.77 Aligned_cols=302 Identities=13% Similarity=0.018 Sum_probs=203.6
Q ss_pred cchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHH-HHHHHHHHHHHHHhhhhh-cchhHHHHHHHHHHhhhhcchhhhH
Q 019567 17 SFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLA-WGVALWSLSTLLTPWAAT-HSTASLLAVRAFFGLAEGVAMPAMS 94 (339)
Q Consensus 17 ~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~r~l~G~g~~~~~~~~~ 94 (339)
+..+...++..+..++.+|+.|.++|+.|+||... ....+..+..++..+... +.++..++.-.+..++.........
T Consensus 58 a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyd 137 (438)
T COG2270 58 AYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYD 137 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehh
Confidence 34678888889999999999999999999766554 444555555555532212 1345556677888888888899999
Q ss_pred HHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHH--HHh-h---------------hhccchHHHHHHHHHHHHHHHHHH
Q 019567 95 TLTSRWFPSHERASAIGICMGGFHLGNVVGLLLT--PIM-L---------------STIGISGPFILFSSLGLLWLSTWT 156 (339)
Q Consensus 95 ~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~--~~l-~---------------~~~~w~~~f~~~~~~~~~~~~~~~ 156 (339)
+++.+..++++-++..++-.....+|+.+.-... ..+ . +..+-|..+.+.++-.++..+..+
T Consensus 138 s~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~ 217 (438)
T COG2270 138 SMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPMI 217 (438)
T ss_pred hHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHHH
Confidence 9999999888777777665555666655544332 111 1 223468888888888888888888
Q ss_pred hhccCCCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccc
Q 019567 157 SKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLK 236 (339)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~ 236 (339)
+..|+.++......+.-.+ .-++...+++++.+++.+....++.++..=+..........|..+.+|++..
T Consensus 218 ~~v~~~~~~~~~~~~~l~~---------g~k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~ 288 (438)
T COG2270 218 LNVHDAEKISSPPPTALRN---------GFKELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSST 288 (438)
T ss_pred hcccccccccccchHHHHH---------HHHHHHHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHH
Confidence 8777766532111111101 1112223577888888899999999999999999999999999988999999
Q ss_pred hhhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhcccchhHHHHHHHHHHHHhhhcc
Q 019567 237 QAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQ 316 (339)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (339)
+...+.....+..++++++.|++.||++.| .++..+.+......+...+.......+++.++.+.+.+...
T Consensus 289 ~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k---------~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~q 359 (438)
T COG2270 289 ELLLIGIALSVVAALGAIIAGFLDERFGSK---------PVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQ 359 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCc---------eeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHH
Confidence 999999999999999999999999999976 33344444444333333333333333333333344444444
Q ss_pred cchhhhhh--hcccchhhhhhh
Q 019567 317 AGYLLNIQ--IAQDFSTALQIQ 336 (339)
Q Consensus 317 ~~~~~~~~--~~p~~~g~~~g~ 336 (339)
+..-+... +.|++.+.-.|.
T Consensus 360 A~SRSy~~~lvp~~k~~~fFgl 381 (438)
T COG2270 360 ASSRSYLARLVPKGKEGRFFGL 381 (438)
T ss_pred HHHHHHHHHhCCCccccceeeh
Confidence 44444555 555666665554
No 124
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.62 E-value=6.4e-14 Score=128.48 Aligned_cols=161 Identities=14% Similarity=0.170 Sum_probs=121.3
Q ss_pred hhh-hHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHH-HhhhhhcchhHHHHHHHHH
Q 019567 5 VVP-LAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLL-TPWAATHSTASLLAVRAFF 82 (339)
Q Consensus 5 ~~~-i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~r~l~ 82 (339)
.|. +++++|.+..+.++..+...++..++.+..|+++||+|||+.+..+.++..++... .....+++...+++++++.
T Consensus 273 ~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (490)
T PRK10642 273 MPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLML 352 (490)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 454 44678998888888888889999999999999999999999988887654443332 1112245677788899999
Q ss_pred HhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhc-cchHHHHHHHHHHHHHHHHHHhhccC
Q 019567 83 GLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTI-GISGPFILFSSLGLLWLSTWTSKVTN 161 (339)
Q Consensus 83 G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~-~w~~~f~~~~~~~~~~~~~~~~~~~~ 161 (339)
|++.+........++.|.+|++.|++++++......++..++|.+.+++.+.. +|+.+++...+.+++..+.. ++.||
T Consensus 353 g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~-~~~pe 431 (490)
T PRK10642 353 AVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITG-VTMKE 431 (490)
T ss_pred HHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHH-HHhcc
Confidence 98877777778888999999999999999754445566678898888887754 47877776666665555444 45588
Q ss_pred CCCCC
Q 019567 162 DPCNS 166 (339)
Q Consensus 162 ~~~~~ 166 (339)
+|++.
T Consensus 432 s~~~~ 436 (490)
T PRK10642 432 TANRP 436 (490)
T ss_pred ccCCC
Confidence 88764
No 125
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.60 E-value=8.3e-15 Score=131.85 Aligned_cols=150 Identities=11% Similarity=0.144 Sum_probs=129.6
Q ss_pred CCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHhhhhcchhh
Q 019567 13 GWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGVAMPA 92 (339)
Q Consensus 13 ~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~~~~~~~ 92 (339)
+.+..+.|++.+...++..++.++.|++.||+|+|+.+..+.++.+++.++. ..++|.+.++..+++.|++.+...+.
T Consensus 258 ~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~--~~~~~~~~~~~~~~l~g~~~~~~~~~ 335 (420)
T PRK09528 258 EQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGS--GFATGPLEVSILKLLHAFEVPFLLVG 335 (420)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHH--HhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 5566788999999999999999999999999999999999999988888887 44788999999999999998888888
Q ss_pred hHHHHhhhCCcchhhHHHHH-HHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhccCCCC
Q 019567 93 MSTLTSRWFPSHERASAIGI-CMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPC 164 (339)
Q Consensus 93 ~~~~i~~~~~~~~r~~~~~~-~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~ 164 (339)
...++.|.+|++.|+...+. ++....+|..++|.+.+++.+..||+..|.+.+++.++..++.+...+++++
T Consensus 336 ~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~~~~ 408 (420)
T PRK09528 336 VFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSGDRE 408 (420)
T ss_pred HHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcCCch
Confidence 88999999999888887655 6778889999999999999999999999999888887766666655555443
No 126
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.59 E-value=5e-14 Score=126.70 Aligned_cols=159 Identities=12% Similarity=0.003 Sum_probs=136.9
Q ss_pred chhhhHhH-hCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHH
Q 019567 4 AVVPLAAK-FGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFF 82 (339)
Q Consensus 4 ~~~~i~~~-~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~ 82 (339)
..|.+.++ +|.++.+.+++.+...++..++.++.+++.||.++++.+..+.++..++.++. ...++.+...++.++.
T Consensus 245 ~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 322 (417)
T PRK10489 245 LYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLF--GLMPMWILAVLCLALF 322 (417)
T ss_pred hhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHH--HccchHHHHHHHHHHH
Confidence 34555566 89999999999999999999999999999999888888888888888877776 4578888888889999
Q ss_pred HhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhccCC
Q 019567 83 GLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTND 162 (339)
Q Consensus 83 G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~ 162 (339)
|++.+...+...+++.|..|+++|++++++++....+|..+||.+.+.+.+..|++..++..+...++..++.....++.
T Consensus 323 g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (417)
T PRK10489 323 GYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLGEL 402 (417)
T ss_pred HHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhcccc
Confidence 99988877888899999999999999999999999999999999999999999999999988887777666666666665
Q ss_pred CC
Q 019567 163 PC 164 (339)
Q Consensus 163 ~~ 164 (339)
++
T Consensus 403 ~~ 404 (417)
T PRK10489 403 RR 404 (417)
T ss_pred cc
Confidence 54
No 127
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.58 E-value=3.6e-14 Score=125.54 Aligned_cols=145 Identities=21% Similarity=0.193 Sum_probs=125.6
Q ss_pred hhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcc--hhHHHHHHHHH
Q 019567 5 VVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHS--TASLLAVRAFF 82 (339)
Q Consensus 5 ~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~r~l~ 82 (339)
.++..++++.++.+.++..+.+.++..++.++.|++.||+|||+.+..+..+..++.+... ..++ ...++...++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 305 (377)
T TIGR00890 228 YKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAML--FIPMLNDVLFLATVALV 305 (377)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHH--HcccchhHHHHHHHHHH
Confidence 3456688999988999999999999999999999999999999999999888888887763 3443 23345667888
Q ss_pred HhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHH
Q 019567 83 GLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLW 151 (339)
Q Consensus 83 G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~ 151 (339)
|++.+...+....++.|.+|+++|+++.|+.+....+|..++|.+.+.+.++.||++.|.+.+++.++.
T Consensus 306 g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 306 FFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred HHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 998888888888999999999999999999999999999999999999999999999999988766653
No 128
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.58 E-value=1.1e-13 Score=123.33 Aligned_cols=148 Identities=13% Similarity=0.065 Sum_probs=123.3
Q ss_pred hhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHhhh
Q 019567 7 PLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAE 86 (339)
Q Consensus 7 ~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~ 86 (339)
.+++++|.++.+.+++.+...++..++.++.|+++||+|||+.+..+.....+..... ...++.+.+++.+++.+++.
T Consensus 242 ~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~l~~~~~ 319 (393)
T PRK15011 242 FIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGM--LMAHSPAILLGLQLLNAIYI 319 (393)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH--HHHhhHHHHHHHHHHHHHHH
Confidence 3567899999999999888888888899999999999999998887766655554444 34677888888999998888
Q ss_pred hcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHh
Q 019567 87 GVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTS 157 (339)
Q Consensus 87 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~ 157 (339)
+...+....+..|.+| ++|++++++++...++|..++|.+++.+.+.+||+..|.+.++..++..+..+.
T Consensus 320 g~~~~~~~~~~~~~~p-~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~ 389 (393)
T PRK15011 320 GILGGIGMLYFQDLMP-GQAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLR 389 (393)
T ss_pred HHHHHHHHHHHHHhCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh
Confidence 8777778888899987 569999999999999999999999999999999999999887777665555443
No 129
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.57 E-value=1e-13 Score=130.71 Aligned_cols=141 Identities=21% Similarity=0.226 Sum_probs=119.4
Q ss_pred hHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHhhhhcchhhhHHHHhh
Q 019567 20 GIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGVAMPAMSTLTSR 99 (339)
Q Consensus 20 g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~~~~~~~~~~~i~~ 99 (339)
.....+..++..++.++.|+++||+|||+++..+.++.+++.++. .+.++...+++.+++.|++.+..++...++++|
T Consensus 598 ~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~--~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aE 675 (742)
T TIGR01299 598 YFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFL--SFGNSESAMIALLCLFGGLSIAAWNALDVLTVE 675 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH--HHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455667778999999999999999999999999999999998888 447778888888999999888888999999999
Q ss_pred hCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhccCCCC
Q 019567 100 WFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPC 164 (339)
Q Consensus 100 ~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~ 164 (339)
++|.++|++++|+......+|.+++|.+++.+.+. +...+|++.+++.++..++.. .+||+..
T Consensus 676 l~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~-~LPET~~ 738 (742)
T TIGR01299 676 LYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLLAL-KLPDTRG 738 (742)
T ss_pred HcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHH-hCCCCcc
Confidence 99999999999999999999999999999888764 456778777777666555444 4476543
No 130
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.57 E-value=1.1e-13 Score=121.13 Aligned_cols=150 Identities=32% Similarity=0.454 Sum_probs=136.5
Q ss_pred hhhhHhH-hCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchH-HHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHH
Q 019567 5 VVPLAAK-FGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKK-VLAWGVALWSLSTLLTPWAATHSTASLLAVRAFF 82 (339)
Q Consensus 5 ~~~i~~~-~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~ 82 (339)
.|.+.+| +|.++.+.++..+...++..++.++.+++.||+|||+ .+..+..+..++.+.. ...++.+...+..++.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~ 275 (352)
T cd06174 198 LPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLL--ALAPSLALLLVALLLL 275 (352)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH--HHhccHHHHHHHHHHH
Confidence 4455555 4899999999999999999999999999999999999 9999999999999888 5578888999999999
Q ss_pred HhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHH
Q 019567 83 GLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWT 156 (339)
Q Consensus 83 G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~ 156 (339)
|++.+...+....++.|..|+++|++.+++.+...++|..+++.+.+.+.+..+|+..+.+.+++.++..+...
T Consensus 276 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 276 GFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLL 349 (352)
T ss_pred HHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhe
Confidence 99999999999999999999999999999999999999999999999999999999999999988877665543
No 131
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.56 E-value=1.7e-13 Score=122.79 Aligned_cols=151 Identities=24% Similarity=0.193 Sum_probs=124.7
Q ss_pred hhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHh
Q 019567 5 VVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGL 84 (339)
Q Consensus 5 ~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~ 84 (339)
.|.+.++.|.++.+.+...+.+.++..++.++.|+++||+|||+.+..+.+...++.... ...++.+.+.+..++.|+
T Consensus 243 ~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~ 320 (406)
T PRK11551 243 LPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAAL--AAAPSFAGMLLAGFAAGL 320 (406)
T ss_pred HHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH--HhcCcHHHHHHHHHHHHH
Confidence 467778889999999999999999999999999999999999999888777666666555 446777777788888999
Q ss_pred hhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhcc-chHHHHHHHHHHHHHHHHHHh
Q 019567 85 AEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIG-ISGPFILFSSLGLLWLSTWTS 157 (339)
Q Consensus 85 g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~-w~~~f~~~~~~~~~~~~~~~~ 157 (339)
+.+...+...+++.|.+|+++|++.+|+.+....+|..++|.+.+.+.++.+ |...++......++..+..+.
T Consensus 321 ~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (406)
T PRK11551 321 FVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALL 394 (406)
T ss_pred HHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHH
Confidence 8888888899999999999999999999999999999999999999988654 555566555554444444443
No 132
>PRK12382 putative transporter; Provisional
Probab=99.56 E-value=1.7e-13 Score=122.23 Aligned_cols=149 Identities=20% Similarity=0.242 Sum_probs=127.7
Q ss_pred hhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHhh
Q 019567 6 VPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLA 85 (339)
Q Consensus 6 ~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g 85 (339)
|...+|.+.+ +.++..+.+.++..+++++.|++.||+|+|+.+..+..+..++.++. ...++.+..++..++.|++
T Consensus 240 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~g~~ 315 (392)
T PRK12382 240 SLYFASKGWA--MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLL--WLAPTAWVALAGAALTGAG 315 (392)
T ss_pred HHHHHhcCCc--hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHH--HHcccHHHHHHHHHHHHHH
Confidence 4444555654 35666777888889999999999999999999999998888888777 4478888888899999999
Q ss_pred hhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhh
Q 019567 86 EGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSK 158 (339)
Q Consensus 86 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~ 158 (339)
.+...+.....+.|.+|+|+|+++.++.+....+|..++|.+.+.+.++.||+..|.+.+.+.++..+..+..
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 316 CSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhh
Confidence 9988888888999999999999999999999999999999999999999999999999988877766655544
No 133
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.56 E-value=6.8e-14 Score=128.75 Aligned_cols=146 Identities=14% Similarity=0.149 Sum_probs=114.6
Q ss_pred hhhhH-hHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHH
Q 019567 5 VVPLA-AKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFG 83 (339)
Q Consensus 5 ~~~i~-~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G 83 (339)
+|.+. +++|.++.+.+++.+.+.++..++.++.|+++||+|||+++..+..+..+..+.......++.+...+..++.+
T Consensus 298 lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (496)
T PRK03893 298 LPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQ 377 (496)
T ss_pred HHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHH
Confidence 45555 58999999999999999999999999999999999999998888777666554432111233444445555554
Q ss_pred hhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHH
Q 019567 84 LAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLL 150 (339)
Q Consensus 84 ~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~ 150 (339)
.......+....++.|.+|+++|++.+++......+|..++|.+++.+.+..||+..+...+....+
T Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~~~ 444 (496)
T PRK03893 378 MLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSLTF 444 (496)
T ss_pred HHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHHHH
Confidence 4433445677788999999999999999999999999999999999999999999888765554433
No 134
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.56 E-value=9.8e-14 Score=124.40 Aligned_cols=142 Identities=19% Similarity=0.199 Sum_probs=122.8
Q ss_pred hhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHhhhhcchhhhHHHHh
Q 019567 19 LGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGVAMPAMSTLTS 98 (339)
Q Consensus 19 ~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~~~~~~~~~~~i~ 98 (339)
.+.+.+.+.++..++.+..|++.||+|||+.+..+..+..++.+.. ...++.+.+++.+++.|++.+...+...+.+.
T Consensus 260 ~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 337 (408)
T PRK09874 260 SGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPM--SFVQTPLQLGILRFLLGAADGALLPAVQTLLV 337 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHH--HHhccHHHHHHHHHHHHhhhHhhHHHHHHHHH
Confidence 4556667778888999999999999999999999988877777666 44678888889999999999999999999999
Q ss_pred hhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhccCC
Q 019567 99 RWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTND 162 (339)
Q Consensus 99 ~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~ 162 (339)
+..|+++|++.+++.+....+|..+||.+++.+.+..||+..|++.+++.++..+..+...+++
T Consensus 338 ~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~~~~~ 401 (408)
T PRK09874 338 YNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNSLRRR 401 (408)
T ss_pred HhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999899999999999999999999999999999999999999999988887776665544433
No 135
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.54 E-value=1.9e-13 Score=124.73 Aligned_cols=152 Identities=17% Similarity=0.099 Sum_probs=116.6
Q ss_pred hh-hhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHH
Q 019567 5 VV-PLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFG 83 (339)
Q Consensus 5 ~~-~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G 83 (339)
.| .+++++|.|..+.++..+...++..++.++.|+++||+|||+.+.....+..++.....+...++.....+.+++.|
T Consensus 281 ~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 360 (467)
T PRK09556 281 SPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLASLFALG 360 (467)
T ss_pred HHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 45 45677999999999999999999999999999999999999887765544444332221123456666778888888
Q ss_pred hhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHH-HHHHHHhHHHHhhh------------hccchHHHHHHHHHHHH
Q 019567 84 LAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHL-GNVVGLLLTPIMLS------------TIGISGPFILFSSLGLL 150 (339)
Q Consensus 84 ~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~l~~~l~~------------~~~w~~~f~~~~~~~~~ 150 (339)
+..............|.+|+++|+++.|+.+...++ |..++|.+.|.+.+ ..||+..|.+..+..++
T Consensus 361 ~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~ 440 (467)
T PRK09556 361 FLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIG 440 (467)
T ss_pred HHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHH
Confidence 654333333346677999999999999999988886 77999999999999 57899999988777666
Q ss_pred HHHHHH
Q 019567 151 WLSTWT 156 (339)
Q Consensus 151 ~~~~~~ 156 (339)
..+..+
T Consensus 441 ~~~~~~ 446 (467)
T PRK09556 441 CICLMA 446 (467)
T ss_pred HHHHHH
Confidence 554444
No 136
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.54 E-value=5.2e-13 Score=118.66 Aligned_cols=147 Identities=17% Similarity=0.208 Sum_probs=123.4
Q ss_pred hhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHh
Q 019567 5 VVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGL 84 (339)
Q Consensus 5 ~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~ 84 (339)
+|...++.|.++++.++..+...++..+++++.|++.||+|+|+.+..+..+..++.+.. . + ........++.|+
T Consensus 223 lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~--~--~-~~~~~~~~~l~g~ 297 (381)
T PRK03633 223 MPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAM--L--S-QAAMAPALFILGA 297 (381)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHH--h--h-hHHHHHHHHHHHH
Confidence 566777889999999999999999999999999999999999999998888877766544 2 2 2334557788888
Q ss_pred hhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHH
Q 019567 85 AEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWT 156 (339)
Q Consensus 85 g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~ 156 (339)
+.....|...+.+.|..|+++++...+......++|..++|.+++++.|+.+|++.|.+.+...++..+..+
T Consensus 298 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~ 369 (381)
T PRK03633 298 AGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLMLL 369 (381)
T ss_pred HHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHH
Confidence 877788999999999998888888888888899999999999999999999999999998877765544433
No 137
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.54 E-value=4.9e-14 Score=127.92 Aligned_cols=147 Identities=17% Similarity=0.110 Sum_probs=121.5
Q ss_pred hhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhh--cchHHHHH--HHHHHHHHHHHHhhhhhcchhHHHHHHH
Q 019567 5 VVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKY--GGKKVLAW--GVALWSLSTLLTPWAATHSTASLLAVRA 80 (339)
Q Consensus 5 ~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~--G~r~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 80 (339)
+|.+.+|+|.++.+.++..+...++..+++++.|+++||. ++|+.... +..+.+++.++. ...+|++.+++.++
T Consensus 264 l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~--~~~~~~~~~~i~~~ 341 (455)
T TIGR00892 264 LVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLC--ALAGDYTGLVIYCI 341 (455)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHH--HHhchHHHHHHHHH
Confidence 4566678899999999999999999999999999999984 34443333 333334444455 44788888999999
Q ss_pred HHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhc-cchHHHHHHHHHHHHHHH
Q 019567 81 FFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTI-GISGPFILFSSLGLLWLS 153 (339)
Q Consensus 81 l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~-~w~~~f~~~~~~~~~~~~ 153 (339)
+.|++.+...+...+++.|.+|++++++.+++++...++|..++|.+++.+.+.. +|+..|++.+++.++..+
T Consensus 342 ~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 342 FFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred HHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999877 599999998877665443
No 138
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.53 E-value=4.9e-13 Score=118.44 Aligned_cols=147 Identities=12% Similarity=0.097 Sum_probs=124.0
Q ss_pred hhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHhhh
Q 019567 7 PLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAE 86 (339)
Q Consensus 7 ~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~ 86 (339)
.+++++|.++.+.+++.+.......++.++.|++.||+|||+.+..+.++..+..... ...++.+.+++.+++.|++.
T Consensus 225 ~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~ 302 (375)
T TIGR00899 225 LIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGL--AADNSLWALLMLQLLNAIFI 302 (375)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHH
Confidence 3467899999999999888877778889999999999999999988877666555444 34677888888999999999
Q ss_pred hcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHH
Q 019567 87 GVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWT 156 (339)
Q Consensus 87 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~ 156 (339)
+...+....++.|..|+ ++++++++++....+|..++|.+++.+.+..||+..|++.++..++..+...
T Consensus 303 g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~ 371 (375)
T TIGR00899 303 GILAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLL 371 (375)
T ss_pred HHHHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHh
Confidence 98888888999999874 5679999999999999999999999999999999999998887766555443
No 139
>PRK03545 putative arabinose transporter; Provisional
Probab=99.52 E-value=9.3e-13 Score=117.39 Aligned_cols=152 Identities=22% Similarity=0.161 Sum_probs=123.5
Q ss_pred hhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHhh
Q 019567 6 VPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLA 85 (339)
Q Consensus 6 ~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g 85 (339)
|.+++++|.|+.+.+++.+.+.++..+++++.|++.||+|||+.. .+..+..++..... ...++.+.+++..++.|++
T Consensus 230 ~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~-~~~~~~~~~~~~l~-~~~~~~~~~~~~~~l~g~~ 307 (390)
T PRK03545 230 PFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLL-IAIALLLVCLLLLL-PAANSEWHLSVLSIFWGIA 307 (390)
T ss_pred HHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHHHHHHHHH-HHhchHHHHHHHHHHHHHH
Confidence 445666899999999999999999999999999999999988754 44444444433221 2357778888899999999
Q ss_pred hhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhcc
Q 019567 86 EGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVT 160 (339)
Q Consensus 86 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~ 160 (339)
.+...+.....+.|..| ++|++++++++....+|..+||.+++.+.+++|++..|++.+.+.++..+......+
T Consensus 308 ~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
T PRK03545 308 IMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIFR 381 (390)
T ss_pred HhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHcc
Confidence 88777778888888876 688999999999999999999999999999999999999998888776666655543
No 140
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.52 E-value=5.6e-11 Score=103.24 Aligned_cols=322 Identities=11% Similarity=0.015 Sum_probs=215.0
Q ss_pred hhhhHhH-hCCCccchh-HHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHH
Q 019567 5 VVPLAAK-FGWSSSFLG-IVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFF 82 (339)
Q Consensus 5 ~~~i~~~-~~~s~~~~g-~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~ 82 (339)
.|.+.+. .|+++.|+. -+.-...-.+....++...+.|..+.|++++++.+...+...+. .+.++...+-+..+.-
T Consensus 27 ~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~ll--l~~~sv~~mq~~q~~y 104 (412)
T PF01770_consen 27 TPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLL--LFGTSVLAMQLMQFFY 104 (412)
T ss_pred hHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH--HHHCcHHHHHHHHHHH
Confidence 3445554 788887764 55566667778889999999999999999999999988888887 5689999999999999
Q ss_pred HhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhc--cchHHHHHHHHHHHHHHHHHHhhcc
Q 019567 83 GLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTI--GISGPFILFSSLGLLWLSTWTSKVT 160 (339)
Q Consensus 83 G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~--~w~~~f~~~~~~~~~~~~~~~~~~~ 160 (339)
|++.+. ..+-.+++=...|+++--++.+...+..-+|-.++..++..+...- +.+...++.... .....++.+++|
T Consensus 105 g~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~-~~~a~~~~~fLP 182 (412)
T PF01770_consen 105 GLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLAS-VSLALLIALFLP 182 (412)
T ss_pred HHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH-HHHHHHHHHHcC
Confidence 999775 5677888888888888899999999999999999999998887633 344444443332 233333334455
Q ss_pred CCCCCC---CCCCh------HHHHHHHhCCcc-----ccccCC-----------CccHHHHhcchhHHHHHHHHHhhHHH
Q 019567 161 NDPCNS---PFVSK------SELRLIQAGKSD-----SVKKRN-----------PPSLRHLLSKLPSWTVIIANITNNWG 215 (339)
Q Consensus 161 ~~~~~~---~~~~~------~~~~~~~~~~~~-----~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (339)
..++.. +.... .+.+..++..++ ++++.. ..++++..++|+++...+.+.+...+
T Consensus 183 ~~~~S~~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atcg 262 (412)
T PF01770_consen 183 MPKRSLFFHRKPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATCG 262 (412)
T ss_pred CCCcccceeccCccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhH
Confidence 544321 11000 000000000000 000000 12345566788898888888888888
Q ss_pred HHHHHHhhhhhhhhh--hCCccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhh
Q 019567 216 YFVLLSWMPIYFNTV--FNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLN 293 (339)
Q Consensus 216 ~~~~~~~~~~~l~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (339)
++...+|.....++. -+-+....|..-+...+.+.++.+..|++..++.+. ....+....++.+.+++++.
T Consensus 263 y~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~-------~~l~l~~~S~l~a~~L~lm~ 335 (412)
T PF01770_consen 263 YYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRW-------GELALGVFSLLQAGLLFLMS 335 (412)
T ss_pred HHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHH-------HHHHHHHHHHHHHHHHHHHH
Confidence 888888877776664 133444567777777788888888888885555443 23444555556666677777
Q ss_pred cccchhHHHHHHHHHHHHhhhcccchhhhhh--hcccchhhhhhhh
Q 019567 294 YAKSPAVAAVLITIALSLSSFSQAGYLLNIQ--IAQDFSTALQIQQ 337 (339)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~~g~~~g~q 337 (339)
+.++.+...+..++......+..+....-.. +..+.-|.+.|+.
T Consensus 336 ~t~~Iwv~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~yaLVFGiN 381 (412)
T PF01770_consen 336 FTGNIWVCYAGYIIFRSLYMFLITIASFQIAKNLSEERYALVFGIN 381 (412)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeeeeH
Confidence 7788887777777666666655554444333 5556666666543
No 141
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.51 E-value=9.1e-13 Score=117.09 Aligned_cols=146 Identities=12% Similarity=0.042 Sum_probs=130.1
Q ss_pred hhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHh
Q 019567 5 VVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGL 84 (339)
Q Consensus 5 ~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~ 84 (339)
.|...+|+|.++.+.|...+...++..+..++.+++.||+|+|+.+.++.++..+..+.. +.++|.+.++..++++|+
T Consensus 228 ~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~q~l~g~ 305 (382)
T TIGR00902 228 SAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAII--GAIEAFPLIFLLQILHCG 305 (382)
T ss_pred HHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHH--HhHhhHHHHHHHHHHHHH
Confidence 455557899999999999999999999999999999999999999999999999998888 558999999999999999
Q ss_pred hhhcchhhhHHHHhhhCCcchhhHHHHHHH-HHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHH
Q 019567 85 AEGVAMPAMSTLTSRWFPSHERASAIGICM-GGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLST 154 (339)
Q Consensus 85 g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~ 154 (339)
..+...+....++.+. |+++|++..++++ ...++|..+++.++|++.|++|+ ..|+..+.+.++..++
T Consensus 306 ~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 306 TFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 9999999999999998 8899999999986 57889999999999999999996 6677777777655433
No 142
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.51 E-value=5e-13 Score=122.10 Aligned_cols=159 Identities=21% Similarity=0.218 Sum_probs=124.9
Q ss_pred hhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhh---hhc------chhHH
Q 019567 5 VVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWA---ATH------STASL 75 (339)
Q Consensus 5 ~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~---~~~------~~~~~ 75 (339)
.|.+.+++|.+..+.++......++..++.++.|+++||+|||+.+..+.++..++.++.++. ..+ +...+
T Consensus 307 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (481)
T TIGR00879 307 SPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAI 386 (481)
T ss_pred HHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHH
Confidence 567778899999888999999999999999999999999999999999988877777666311 112 22222
Q ss_pred HHHHHHHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHH
Q 019567 76 LAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTW 155 (339)
Q Consensus 76 ~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~ 155 (339)
....+..+.......+....++.|.+|+++|++++++.+....+|..++|.+.+.+.++.+|++.|++.++++++..+..
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~ 466 (481)
T TIGR00879 387 VFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFV 466 (481)
T ss_pred HHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHH
Confidence 33333332222234466677789999999999999999999999999999999999999999999999998888877777
Q ss_pred HhhccCCC
Q 019567 156 TSKVTNDP 163 (339)
Q Consensus 156 ~~~~~~~~ 163 (339)
++..||.+
T Consensus 467 ~~~~~~~~ 474 (481)
T TIGR00879 467 YFFLPETK 474 (481)
T ss_pred heecccCC
Confidence 66666654
No 143
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.51 E-value=1.2e-12 Score=119.88 Aligned_cols=160 Identities=16% Similarity=0.114 Sum_probs=122.1
Q ss_pred hhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcch-h-HHHHHHHHH
Q 019567 5 VVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHST-A-SLLAVRAFF 82 (339)
Q Consensus 5 ~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~r~l~ 82 (339)
.|.+.+++|.+..+..+......+...++.++.++++||+|||+.++.+..+.+++.++......++. + ....+-++.
T Consensus 294 ~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~ 373 (479)
T PRK10077 294 APEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFY 373 (479)
T ss_pred HHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHH
Confidence 37777888988877777777888889999999999999999999999999998888777633211221 1 223334444
Q ss_pred Hhhhhc-chhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHH------hhhhccchHHHHHHHHHHHHHHHHH
Q 019567 83 GLAEGV-AMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPI------MLSTIGISGPFILFSSLGLLWLSTW 155 (339)
Q Consensus 83 G~g~~~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~------l~~~~~w~~~f~~~~~~~~~~~~~~ 155 (339)
+.+.+. ..+....++.|.+|+++|++++|+......+|..+++.+.+. +.+..+|++.|++.++++++..+..
T Consensus 374 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (479)
T PRK10077 374 VAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFM 453 (479)
T ss_pred HHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHHHHHH
Confidence 544443 336778999999999999999999999999998888666544 3467899999999888888777777
Q ss_pred HhhccCCCC
Q 019567 156 TSKVTNDPC 164 (339)
Q Consensus 156 ~~~~~~~~~ 164 (339)
+.+.||+++
T Consensus 454 ~~~~~e~~~ 462 (479)
T PRK10077 454 WKFVPETKG 462 (479)
T ss_pred HhccccCCC
Confidence 666676654
No 144
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.51 E-value=3.2e-12 Score=112.90 Aligned_cols=228 Identities=16% Similarity=0.151 Sum_probs=158.8
Q ss_pred hhhHh-HhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcc-hHHHHHHHHHHHHHHHHH-hhhhh-c-chhHHHHHHH
Q 019567 6 VPLAA-KFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGG-KKVLAWGVALWSLSTLLT-PWAAT-H-STASLLAVRA 80 (339)
Q Consensus 6 ~~i~~-~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~-r~~l~~~~~~~~~~~~~~-~~~~~-~-~~~~~~~~r~ 80 (339)
|++++ |.+.+.+..|++.++..++.+++++..|++..|.+. |+.++.+.++..+++++. .+... + ..+.++++|+
T Consensus 59 pYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~ 138 (488)
T KOG2325|consen 59 PYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARI 138 (488)
T ss_pred hhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHH
Confidence 33333 467778889999999999999999999999999997 889999999999999987 33322 2 5788999999
Q ss_pred HHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhh--cc-----------chHHHHHHHHH
Q 019567 81 FFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLST--IG-----------ISGPFILFSSL 147 (339)
Q Consensus 81 l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~--~~-----------w~~~f~~~~~~ 147 (339)
+.|+|.+ .....-+++++-...++|.++++..+.+..+|..+||.+...+..- -| +..+-++.+++
T Consensus 139 l~Gvg~~-n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~ 217 (488)
T KOG2325|consen 139 LTGVGVG-NFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAIL 217 (488)
T ss_pred HcCcCcc-cHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHH
Confidence 9999966 4578899999988889999999999998999999999887665431 11 24466777888
Q ss_pred HHHHHHHHHhhccCCCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhh
Q 019567 148 GLLWLSTWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYF 227 (339)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 227 (339)
.++..+......+|.+++..+...++. .+++.++++.+..+.++. ..+......+.....+....+..+...
T Consensus 218 ~i~~~v~i~~~f~E~~~~~~~~~~~~~--~~~~~~~~~~~~~~~d~~------~~~vc~~~~~~~~~~~~~iet~~~~~~ 289 (488)
T KOG2325|consen 218 WIIYIVIILFFFKEVYRGIIDKKKRSV--EEEKSDIEKVKKPKLDWV------AVLVCIFLRFVVNFIATTIETLSSALT 289 (488)
T ss_pred HHHHHHHHHhheeecccCccccccccc--hhhccchhhhccCChhHH------HHHHHHHHHHHHHHHHHHHHhccchHH
Confidence 888777777777887765533322111 011111111112222221 233444555555556666566667777
Q ss_pred hhhhCCccchhhHhh
Q 019567 228 NTVFNVNLKQAAWFS 242 (339)
Q Consensus 228 ~~~~g~~~~~~~~~~ 242 (339)
...++++.+++-...
T Consensus 290 m~~y~w~~~~av~~~ 304 (488)
T KOG2325|consen 290 MVMYGWTGSEAVLYN 304 (488)
T ss_pred HHHhccccchHHHhh
Confidence 777788766654443
No 145
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.48 E-value=2.9e-12 Score=114.23 Aligned_cols=158 Identities=12% Similarity=0.045 Sum_probs=126.1
Q ss_pred hhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHh
Q 019567 5 VVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGL 84 (339)
Q Consensus 5 ~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~ 84 (339)
.|.+.+|+|.+..+.+...+.+.++..++.+..|++.||+|||+.+..+..+..++..+... ..++...+ .-++.|+
T Consensus 228 lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~--~~~l~g~ 304 (393)
T PRK09705 228 LPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIW-LPLQLPVL--WAMVCGL 304 (393)
T ss_pred HHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHH-ccchHHHH--HHHHHHH
Confidence 46666778999999999999999999999999999999999999999888777776665421 12222222 2346788
Q ss_pred hhhcchhhhHHHHhhhCC-cchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhcc-chHHHHHHHHHHHHHHHHHHhhccCC
Q 019567 85 AEGVAMPAMSTLTSRWFP-SHERASAIGICMGGFHLGNVVGLLLTPIMLSTIG-ISGPFILFSSLGLLWLSTWTSKVTND 162 (339)
Q Consensus 85 g~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~-w~~~f~~~~~~~~~~~~~~~~~~~~~ 162 (339)
+.+...+.......+..+ +++|++..++.+....++..++|.+.+++.+..| |...|.+.++.+++..+....+.||+
T Consensus 305 g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (393)
T PRK09705 305 GLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPAR 384 (393)
T ss_pred hccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhcccc
Confidence 888888877777777775 5789999999999999999999999999999876 88888888877777766667777776
Q ss_pred CCC
Q 019567 163 PCN 165 (339)
Q Consensus 163 ~~~ 165 (339)
+++
T Consensus 385 ~~~ 387 (393)
T PRK09705 385 FPQ 387 (393)
T ss_pred ccc
Confidence 654
No 146
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.46 E-value=3.5e-11 Score=110.23 Aligned_cols=153 Identities=16% Similarity=0.079 Sum_probs=119.9
Q ss_pred hhhHhHhCCCccchhHHHH-HHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHh-hhhh-cchhHHHHHHHHH
Q 019567 6 VPLAAKFGWSSSFLGIVQS-SFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTP-WAAT-HSTASLLAVRAFF 82 (339)
Q Consensus 6 ~~i~~~~~~s~~~~g~~~s-~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~r~l~ 82 (339)
|.+.+++|.|+++.++... ...++..++.++.|+++||+|+|+.+.++.++..+..+... .+.. ++.+.+...-+++
T Consensus 247 ~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~ 326 (491)
T PRK11010 247 TFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFE 326 (491)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHH
Confidence 4456789999999999985 55689999999999999999999988776665555443321 1222 4555555566666
Q ss_pred HhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhh
Q 019567 83 GLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSK 158 (339)
Q Consensus 83 G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~ 158 (339)
.++.+...+...++..+..+++.+++..++.+...++|..+++++.|.+.+..||+..|.+.++.+++..+.....
T Consensus 327 ~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~ 402 (491)
T PRK11010 327 NLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVC 402 (491)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 6666666677788889999988999999999999999999999999999999999999999888887766655544
No 147
>PRK03699 putative transporter; Provisional
Probab=99.46 E-value=1.9e-12 Score=115.57 Aligned_cols=150 Identities=17% Similarity=0.172 Sum_probs=124.5
Q ss_pred hhhh-HhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHH
Q 019567 5 VVPL-AAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFG 83 (339)
Q Consensus 5 ~~~i-~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G 83 (339)
.|.+ ++++|.|+.+.++..+.+.++..++.+..|+++||++||+.+.....+..+...+. ...+|...+.+..++.|
T Consensus 228 ~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~G 305 (394)
T PRK03699 228 VPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLF--VNTDDPSHLLYAILGLG 305 (394)
T ss_pred HHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHH--HHcCCchHHHHHHHHHH
Confidence 4544 46789999999999999999999999999999999999999988877766665555 44677777777888899
Q ss_pred hhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHh
Q 019567 84 LAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTS 157 (339)
Q Consensus 84 ~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~ 157 (339)
++.+..++...+...|..| +++++..+.......+|..++|.+.+.+.+..||+..+++.+++.++..+....
T Consensus 306 ~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 378 (394)
T PRK03699 306 FFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMCIL 378 (394)
T ss_pred HHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHHHH
Confidence 9888888888888888775 556778888888999999999999999999999999999888777666544433
No 148
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.42 E-value=1.2e-11 Score=110.67 Aligned_cols=151 Identities=18% Similarity=0.197 Sum_probs=118.5
Q ss_pred hhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHH-HHHHHHHHHHHHHhhh---hhcchhHHHHHHH
Q 019567 5 VVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLA-WGVALWSLSTLLTPWA---ATHSTASLLAVRA 80 (339)
Q Consensus 5 ~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~r~ 80 (339)
.|.+.+++|.++.+.++..+...++..++.+..|+++||+|||+.+. .+.+...++.+...+. ..++.+..++..+
T Consensus 245 ~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 324 (402)
T TIGR00897 245 LPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAVALIIAI 324 (402)
T ss_pred HHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHH
Confidence 56777889999999999999999999999999999999999988764 3333333333332111 1346677778888
Q ss_pred HHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHh
Q 019567 81 FFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTS 157 (339)
Q Consensus 81 l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~ 157 (339)
+.|++.+...+ ....+.|.. +++|++++|+.+....+|..++|.+++.+.+..||+..|++.++..++..++..+
T Consensus 325 ~~G~~~~~~~~-~~~~~~~~~-~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~ 399 (402)
T TIGR00897 325 ALGIFLAGYVP-LAAVFPTLA-PKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAF 399 (402)
T ss_pred HHHHHHHHHHH-HHHHHHhhC-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHH
Confidence 99998876544 456667765 4689999999999999999999999999999999999999988887776655544
No 149
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.42 E-value=8e-12 Score=112.95 Aligned_cols=155 Identities=14% Similarity=-0.017 Sum_probs=108.1
Q ss_pred hHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhh--cchHHH-HHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHh
Q 019567 8 LAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKY--GGKKVL-AWGVALWSLSTLLTPWAATHSTASLLAVRAFFGL 84 (339)
Q Consensus 8 i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~--G~r~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~ 84 (339)
+.+++|.|..+.+...+.+.++..++.++.|+++||+ ++|+.. ........+...........+........+..|+
T Consensus 270 l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 349 (434)
T PRK11663 270 MSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPFASYVMQAACFFTIGF 349 (434)
T ss_pred HHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHH
Confidence 3467899999999999999999999999999999999 333332 2211111111111100112333333344444454
Q ss_pred hhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhccCC
Q 019567 85 AEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTND 162 (339)
Q Consensus 85 g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~ 162 (339)
+...........+.|.+|+++|++.+|+.+....+|..++|.+.+++.++.||+..|++.++.+++..+..+...+++
T Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~ 427 (434)
T PRK11663 350 FVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLLPFLNAQ 427 (434)
T ss_pred HHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 332222233456789999999999999999999999999999999999999999999999888877766665554443
No 150
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.41 E-value=3.2e-12 Score=113.81 Aligned_cols=145 Identities=17% Similarity=0.160 Sum_probs=115.8
Q ss_pred hhhh-HhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHH--HHhhhhhcchhHHHHHHHH
Q 019567 5 VVPL-AAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTL--LTPWAATHSTASLLAVRAF 81 (339)
Q Consensus 5 ~~~i-~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~r~l 81 (339)
.|.+ ++++|.++.+.+...+...++..++.++.|+++||+|||+.+.....+..+... ...+...++.+.+....++
T Consensus 242 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (394)
T TIGR00883 242 LPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLG 321 (394)
T ss_pred HHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHH
Confidence 3444 477899999999999999999999999999999999999988765554443331 2211123566777788899
Q ss_pred HHhhhhcchhhhHHHHhhhCCcchhhHHHHH-HHHHHHHHHHHHHhHHHHhhhhcc-chHHHHHHHHHHH
Q 019567 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGI-CMGGFHLGNVVGLLLTPIMLSTIG-ISGPFILFSSLGL 149 (339)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~~g~~~~~~l~~~l~~~~~-w~~~f~~~~~~~~ 149 (339)
.|++.+...+...+++.|.+|+++|+++.++ .+....+|..++|.+++.+.++.| |+..++......+
T Consensus 322 ~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~l 391 (394)
T TIGR00883 322 LALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALAL 391 (394)
T ss_pred HHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHHH
Confidence 9999888899999999999999999999998 456677899999999999999888 8888777665443
No 151
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.41 E-value=1.3e-11 Score=112.66 Aligned_cols=150 Identities=21% Similarity=0.198 Sum_probs=134.1
Q ss_pred chhhhH-hHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHH
Q 019567 4 AVVPLA-AKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFF 82 (339)
Q Consensus 4 ~~~~i~-~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~ 82 (339)
++|.+. +++|.++...|++.+.+.+|..++++..+++.+|+++++.+..+.+.++++.+.. +++++.+...+.-++.
T Consensus 240 LlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~l--al~~~~~~~~~~l~l~ 317 (524)
T PF05977_consen 240 LLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLL--ALSPSFWLALIALFLA 317 (524)
T ss_pred hhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHH--hcchHHHHHHHHHHHH
Confidence 356654 5689999999999999999999999999999999999999999999999888888 5589999999999999
Q ss_pred HhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHH
Q 019567 83 GLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTW 155 (339)
Q Consensus 83 G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~ 155 (339)
|++.....+...+.+.+..|++.|||.++++++....+..+|..+.|.+.+.+|-+..+.+.++..++..++.
T Consensus 318 G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~ 390 (524)
T PF05977_consen 318 GAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIA 390 (524)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 9999998889999999999999999999999999999999999999999999999999888776555544443
No 152
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.40 E-value=6e-12 Score=112.58 Aligned_cols=137 Identities=17% Similarity=0.171 Sum_probs=114.4
Q ss_pred hhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHhhh
Q 019567 7 PLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAE 86 (339)
Q Consensus 7 ~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~ 86 (339)
.+.+++|.++.+.+++.+...++..++.++.|++.||+|||+.+..+..+..+..... +...++.+.+.+..++.|+..
T Consensus 264 ~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 342 (405)
T TIGR00891 264 YLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPV-FAIGANVAVLGLGLFFQQMLV 342 (405)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHH-HHhCCchHHHHHHHHHHHHHH
Confidence 3556789999999999999999999999999999999999999988877653333322 123456667777777888777
Q ss_pred hcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhcc-chHHHHHH
Q 019567 87 GVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIG-ISGPFILF 144 (339)
Q Consensus 87 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~-w~~~f~~~ 144 (339)
+...+....++.|.+|+++|++++|+.+....+|..++|++.+.+.++.| |+..+...
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~~ 401 (405)
T TIGR00891 343 QGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALASL 401 (405)
T ss_pred ccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHhh
Confidence 77778888999999999999999999999999999999999999999988 87776653
No 153
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.39 E-value=1.1e-11 Score=111.98 Aligned_cols=136 Identities=15% Similarity=0.208 Sum_probs=103.5
Q ss_pred hhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHh
Q 019567 5 VVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGL 84 (339)
Q Consensus 5 ~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~ 84 (339)
.|...++.|.++.+.+...+.+.++..++.++.|++.||+|||+.+..+.++..+..+.. ...++.....+.-.+.|+
T Consensus 254 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 331 (426)
T PRK12307 254 LPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPL--FRIPQDNYLLLGACLFGL 331 (426)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH--HHHccccHHHHHHHHHHH
Confidence 466667789999999999999999999999999999999999999988887766655544 212222112222233333
Q ss_pred h--hhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHH
Q 019567 85 A--EGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFI 142 (339)
Q Consensus 85 g--~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~ 142 (339)
+ .....+..+.++.|.+|+++|++++|+......+|..++|.+.+++.+..|+....+
T Consensus 332 ~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~~~~ 391 (426)
T PRK12307 332 MATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAALT 391 (426)
T ss_pred HHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccHHHHHH
Confidence 2 223345566788999999999999999999999999999999999999888765433
No 154
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.38 E-value=1.5e-11 Score=109.43 Aligned_cols=147 Identities=20% Similarity=0.151 Sum_probs=110.5
Q ss_pred hhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchH--HHH------HHHHHHHHHHHHHhhhhhcchhHHHHH
Q 019567 7 PLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKK--VLA------WGVALWSLSTLLTPWAATHSTASLLAV 78 (339)
Q Consensus 7 ~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~--~l~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (339)
.+++++|.|+.+.++..+...++..++.++.|++.||+|||+ ... .+.++..+..... ...++.+.....
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 318 (399)
T TIGR00893 241 YLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFAT--NYVNIPYAALAL 318 (399)
T ss_pred HHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHh--ccchhHHHHHHH
Confidence 345678999999999999999999999999999999999996 111 1111111111111 112344444444
Q ss_pred HHHHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhcc-chHHHHHHHHHHHHHHHHHH
Q 019567 79 RAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIG-ISGPFILFSSLGLLWLSTWT 156 (339)
Q Consensus 79 r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~-w~~~f~~~~~~~~~~~~~~~ 156 (339)
..+.+.+.+ ..+...+++.|.+|+++|++++++.+....+|..++|.+.+.+.+..| |+..|.+.++..++..+..+
T Consensus 319 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 319 VALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYL 396 (399)
T ss_pred HHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHH
Confidence 445555544 788999999999999999999999999999999999999999999988 99999988887776555443
No 155
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.37 E-value=1.9e-11 Score=111.10 Aligned_cols=154 Identities=12% Similarity=0.061 Sum_probs=106.6
Q ss_pred hhhh-HhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhh--cchHHHH-HHHHHHHHHHHHHhhhhhcchhHHHHHHH
Q 019567 5 VVPL-AAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKY--GGKKVLA-WGVALWSLSTLLTPWAATHSTASLLAVRA 80 (339)
Q Consensus 5 ~~~i-~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~--G~r~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 80 (339)
+|.. +++.|.+..+.++....+.++..++.++.|+++||+ +||+... ....+..++.+...+...++.+...+..+
T Consensus 276 ~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 355 (452)
T PRK11273 276 SPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVDMACMI 355 (452)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHHHHHHHH
Confidence 4554 455789989999999999999999999999999999 5554322 22233333332221111234444445555
Q ss_pred HHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHH-HHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhh
Q 019567 81 FFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNV-VGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSK 158 (339)
Q Consensus 81 l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~-~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~ 158 (339)
+.|.+..........+..|.+|+++||+++|+.+....+|.. .+|.+.+.+.++.||+..|.+.++.+++.++.....
T Consensus 356 ~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~ 434 (452)
T PRK11273 356 VIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVV 434 (452)
T ss_pred HHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 555543332233345677999999999999999988888765 479999999999999999998888777765554433
No 156
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.36 E-value=4.8e-11 Score=106.11 Aligned_cols=142 Identities=13% Similarity=0.101 Sum_probs=121.0
Q ss_pred hhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHhh
Q 019567 6 VPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLA 85 (339)
Q Consensus 6 ~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g 85 (339)
|...+|.|.++.+.|...+...++..+..++.|++.||+|+|+.+..+.++.+++.++. ...++.+.+++..++.|++
T Consensus 229 ~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~g~~ 306 (382)
T PRK11128 229 AIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLM--GSTTALPWLIVIQILHCGT 306 (382)
T ss_pred HHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH--HhhhhHHHHHHHHHHHHHH
Confidence 44557789999999999999999999999999999999999999999999888887777 4578999999999999999
Q ss_pred hhcchhhhHHHHhhhCCcchhhHHHHHHH-HHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHH
Q 019567 86 EGVAMPAMSTLTSRWFPSHERASAIGICM-GGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLW 151 (339)
Q Consensus 86 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~ 151 (339)
.+...+....++.+. +++++++..+..+ ....+|..+||.++|.+.|.+|+ ..|+..+++.++.
T Consensus 307 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~ 371 (382)
T PRK11128 307 FTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPA 371 (382)
T ss_pred HHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHH
Confidence 998889999998886 5677788888876 56678889999999999999887 4666666665543
No 157
>PRK09952 shikimate transporter; Provisional
Probab=99.36 E-value=6e-11 Score=107.35 Aligned_cols=154 Identities=12% Similarity=0.035 Sum_probs=112.5
Q ss_pred hhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhh-h-cchhHHHHHHHHHHh
Q 019567 7 PLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAA-T-HSTASLLAVRAFFGL 84 (339)
Q Consensus 7 ~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~r~l~G~ 84 (339)
.+++++|.++.+.............++.++.|+++||+|||+++..+.++..++.+...... . ++...+++..++.++
T Consensus 276 y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 355 (438)
T PRK09952 276 YSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANI 355 (438)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Confidence 34567888887666666666677788899999999999999999888766555443321111 1 234444556677788
Q ss_pred hhhcchhhhHHHHhhhCCcchhhHHHHHH-HHHHHHHHHHHHhHHHHhhhhc--cchHHHHHHHHHHHHHHHHHHhhccC
Q 019567 85 AEGVAMPAMSTLTSRWFPSHERASAIGIC-MGGFHLGNVVGLLLTPIMLSTI--GISGPFILFSSLGLLWLSTWTSKVTN 161 (339)
Q Consensus 85 g~~~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~~g~~~~~~l~~~l~~~~--~w~~~f~~~~~~~~~~~~~~~~~~~~ 161 (339)
+.+...+...+++.|.+|.+.|+.+.++. +.+..+|..++|.+.+++.+.. +|+..+...++..++..+..+ ..||
T Consensus 356 ~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~-~~~~ 434 (438)
T PRK09952 356 AHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTAL-LMKD 434 (438)
T ss_pred HHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHH-Hccc
Confidence 88888888899999999999999888885 4445589999999999998743 488888877777766555544 3354
No 158
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.36 E-value=1.7e-11 Score=110.03 Aligned_cols=157 Identities=21% Similarity=0.200 Sum_probs=125.0
Q ss_pred chhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhh-----cchHHHHHHHHHHHHHHHHHhhhh--hcchhHHH
Q 019567 4 AVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKY-----GGKKVLAWGVALWSLSTLLTPWAA--THSTASLL 76 (339)
Q Consensus 4 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~-----G~r~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~ 76 (339)
..|.+++++|+++++.....+...+... ..++.|.++|-+ .||+-++++.++.+++.+..+... ..+.....
T Consensus 12 ~~~~l~~~l~ls~~~~~~~~~~~~lPw~-~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~ 90 (433)
T PF03092_consen 12 IYPFLKDDLGLSPAQLQRLSSLASLPWS-IKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAV 90 (433)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHhCchH-HhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHH
Confidence 4678899999999999999988888774 478899999976 366677777777765555553211 23566667
Q ss_pred HHHHHHHhhhhcchhhhHHHHhhhCC--cchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHH
Q 019567 77 AVRAFFGLAEGVAMPAMSTLTSRWFP--SHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLST 154 (339)
Q Consensus 77 ~~r~l~G~g~~~~~~~~~~~i~~~~~--~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~ 154 (339)
+.-++..+|.+.....+.+++.|... +++|+...+.......+|.+++..++|.+.+..+++..|.+.+++..+..+.
T Consensus 91 ~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~ 170 (433)
T PF03092_consen 91 VLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIV 170 (433)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHH
Confidence 77788899999999999999999883 3347888889889999999999999999999999999999988887777666
Q ss_pred HHhhccC
Q 019567 155 WTSKVTN 161 (339)
Q Consensus 155 ~~~~~~~ 161 (339)
..+..+|
T Consensus 171 ~~~~~~e 177 (433)
T PF03092_consen 171 ALFLLEE 177 (433)
T ss_pred HHHhhhh
Confidence 6666665
No 159
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.34 E-value=7e-11 Score=102.21 Aligned_cols=156 Identities=23% Similarity=0.272 Sum_probs=129.6
Q ss_pred cchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHH
Q 019567 3 VAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFF 82 (339)
Q Consensus 3 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~ 82 (339)
.+-|.+++..|.|.++++++.-.|.++..++..+.|+++|| +.|+.+.....+..+..+...+ ..++.+..++.-++-
T Consensus 233 Yi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~-~~~~~~~~~~~~~~w 310 (394)
T COG2814 233 YIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTF-TGASPALALALLFLW 310 (394)
T ss_pred hHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHH-hcchHHHHHHHHHHH
Confidence 45688888999999999999999999999999999999999 9999999887777777766533 355666666777777
Q ss_pred HhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhccC
Q 019567 83 GLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTN 161 (339)
Q Consensus 83 G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~ 161 (339)
|++...........+++ ..+|.+..+.+++....++|..+|..+++.+.+++|+....++.+++.++..++.+...+.
T Consensus 311 g~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~~~ 388 (394)
T COG2814 311 GFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSARK 388 (394)
T ss_pred HHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 87777666666666666 3358899999999999999999999999999999999999999999888877766655443
No 160
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.34 E-value=2.6e-11 Score=106.82 Aligned_cols=131 Identities=19% Similarity=0.245 Sum_probs=116.4
Q ss_pred chhhhHhH-hCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhc-chhHHHHHHHH
Q 019567 4 AVVPLAAK-FGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATH-STASLLAVRAF 81 (339)
Q Consensus 4 ~~~~i~~~-~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~r~l 81 (339)
..|.+.++ +|.++.+.++..+...++..++.++.+++.||++||+.+..+..+.+++.... ...+ +.+.+++..++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 310 (365)
T TIGR00900 233 LFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVV--GLTPPNFPLFLVLWFA 310 (365)
T ss_pred HhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHH--HhhchhHHHHHHHHHH
Confidence 35666665 89999999999999999999999999999999999999998887777777776 3355 48888899999
Q ss_pred HHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhcc
Q 019567 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIG 136 (339)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~ 136 (339)
.|++.+...+...+++.|..|+++|++..++.+....+|..++|.+++.+.+++|
T Consensus 311 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 311 IGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999999999988654
No 161
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.31 E-value=1.2e-10 Score=105.36 Aligned_cols=149 Identities=21% Similarity=0.220 Sum_probs=130.0
Q ss_pred hhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcch--HHHHHHHHHHHHHHHHHhhhh--------hcchhHHH
Q 019567 7 PLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGK--KVLAWGVALWSLSTLLTPWAA--------THSTASLL 76 (339)
Q Consensus 7 ~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r--~~l~~~~~~~~~~~~~~~~~~--------~~~~~~~~ 76 (339)
.-.+++|.+..+...+.-...+...+++++.|++.||+|.| +++..+++.+.+..+.. .. .++.+.+.
T Consensus 307 ~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g--~~G~~~~~~g~~~~~~f~ 384 (477)
T PF11700_consen 307 YATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYG--LFGFWPSFFGLKSPWEFW 384 (477)
T ss_pred HHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHH--HHHhhhcccCcccHHHHH
Confidence 44568999999999999999999999999999999999999 89888888875555543 22 47788899
Q ss_pred HHHHHHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhcc-chHHHHHHHHHHHHHHHHH
Q 019567 77 AVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIG-ISGPFILFSSLGLLWLSTW 155 (339)
Q Consensus 77 ~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~-w~~~f~~~~~~~~~~~~~~ 155 (339)
+.-++.|+..|..++...++.+|..|+++.+..+|++....-....+||.+.+.+.+..| -|..+....++.++.+++.
T Consensus 385 ~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll 464 (477)
T PF11700_consen 385 VLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILL 464 (477)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999998776 8888888877777666555
Q ss_pred Hh
Q 019567 156 TS 157 (339)
Q Consensus 156 ~~ 157 (339)
+.
T Consensus 465 ~~ 466 (477)
T PF11700_consen 465 FF 466 (477)
T ss_pred hh
Confidence 43
No 162
>PRK15075 citrate-proton symporter; Provisional
Probab=99.31 E-value=9.4e-11 Score=106.02 Aligned_cols=134 Identities=19% Similarity=0.190 Sum_probs=98.8
Q ss_pred hhhhH-hHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHH-Hhh-hhhcchhHHHHHHHH
Q 019567 5 VVPLA-AKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLL-TPW-AATHSTASLLAVRAF 81 (339)
Q Consensus 5 ~~~i~-~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~r~l 81 (339)
.|.+. +++|.+..+.++....+.++..++.++.|+++||+|||+.+..+..+..+.... ..+ ...++........++
T Consensus 261 ~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (434)
T PRK15075 261 TPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARMLAVELW 340 (434)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHH
Confidence 45544 448999999999999999999999999999999999999888765544332211 100 112344444455666
Q ss_pred HHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHH-HHHHHHHHHHhHHHHhhhhccch
Q 019567 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMG-GFHLGNVVGLLLTPIMLSTIGIS 138 (339)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~g~~~~~~l~~~l~~~~~w~ 138 (339)
.|++.+...+....++.|.+|+++|+..+++... +..++..++|.+.+++.++.|++
T Consensus 341 ~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 341 LSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred HHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCc
Confidence 6777777667777889999999999999998544 44456778999999999988864
No 163
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.30 E-value=1.8e-10 Score=103.33 Aligned_cols=153 Identities=18% Similarity=0.096 Sum_probs=118.8
Q ss_pred hHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhh---hcchhHHHHHHHHHHh
Q 019567 8 LAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAA---THSTASLLAVRAFFGL 84 (339)
Q Consensus 8 i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~r~l~G~ 84 (339)
+.+++|.++.+.++......++..++.++.|++.||+++|+.+.++..+..++..+..+.. .++.+.+++.-++.|+
T Consensus 242 ~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~ 321 (406)
T PRK15402 242 LISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAF 321 (406)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHH
Confidence 3577899999999988888888999999999999999999999998887777776653321 2356667788899999
Q ss_pred hhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhccC
Q 019567 85 AEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTN 161 (339)
Q Consensus 85 g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~ 161 (339)
+.+...+......... ++++|++..+..+....+|..+|+.+++.+.+..++....+...+..++.......+.++
T Consensus 322 g~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (406)
T PRK15402 322 GIGLANAGLYRLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLWLLLVRIFLKD 397 (406)
T ss_pred HHHHHhhhHHHHHhhh-ccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9988777666665444 458999999999999999999999999999888887766565555555444443434333
No 164
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.30 E-value=1.3e-10 Score=103.55 Aligned_cols=149 Identities=19% Similarity=0.187 Sum_probs=114.5
Q ss_pred hhhhHhHhCCCccchhHHHHHHHH-HHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhh-h---hhcchhHHHHHH
Q 019567 5 VVPLAAKFGWSSSFLGIVQSSFLW-GYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPW-A---ATHSTASLLAVR 79 (339)
Q Consensus 5 ~~~i~~~~~~s~~~~g~~~s~~~~-~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~r 79 (339)
.+...+|.|.+++++|++...... ...++.++.|++.||+|+|+.+..+..+..+..+.... . ..++...+....
T Consensus 231 ~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (390)
T TIGR02718 231 SKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCS 310 (390)
T ss_pred hhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHH
Confidence 345567789999999999888764 66677899999999999999998877665333332210 0 012333445555
Q ss_pred HHHHhhhhcchhhhHHHHhhhCCc-chhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHH
Q 019567 80 AFFGLAEGVAMPAMSTLTSRWFPS-HERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLS 153 (339)
Q Consensus 80 ~l~G~g~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~ 153 (339)
.+.+++.+...+...+.+.+..++ +++++.+++.+...++|..++|.+++.+.+..|++..|.+.+++.++...
T Consensus 311 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 311 AFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 666777777778888887777766 78999999999999999999999999999999999999988776665443
No 165
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.30 E-value=8.1e-09 Score=96.66 Aligned_cols=155 Identities=19% Similarity=0.250 Sum_probs=126.7
Q ss_pred chhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhh-hcchHHHHHHHHHHHHHHHHHhhhhhcc------hhHHH
Q 019567 4 AVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDK-YGGKKVLAWGVALWSLSTLLTPWAATHS------TASLL 76 (339)
Q Consensus 4 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr-~G~r~~l~~~~~~~~~~~~~~~~~~~~~------~~~~~ 76 (339)
+...+.+.+|.+.++...+...+.....+.+.++|.++|+ +|+++++.++.++..++..+..+...+. ....+
T Consensus 10 LvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l 89 (654)
T TIGR00926 10 LVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDL 89 (654)
T ss_pred HHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHH
Confidence 4556778899999999999999999999999999999996 5999999999999999998874321111 13366
Q ss_pred HHHHHHHhhhhcchhhhHHHHhhhCCcc---hhhHHHHHHHHHHHHHHHHHHhHHHHhhhhc-------cchHHHHHHHH
Q 019567 77 AVRAFFGLAEGVAMPAMSTLTSRWFPSH---ERASAIGICMGGFHLGNVVGLLLTPIMLSTI-------GISGPFILFSS 146 (339)
Q Consensus 77 ~~r~l~G~g~~~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~-------~w~~~f~~~~~ 146 (339)
++-.+..+|.|+.-|...+...|.++++ +|-+.+.++..+.++|+.+++.+.+++.++. +|...|.+.++
T Consensus 90 ~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i 169 (654)
T TIGR00926 90 LGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAI 169 (654)
T ss_pred HHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHH
Confidence 7788888999999999999999999754 3677888999999999999999999887543 69999999988
Q ss_pred HHHHHHHHHHhh
Q 019567 147 LGLLWLSTWTSK 158 (339)
Q Consensus 147 ~~~~~~~~~~~~ 158 (339)
..++..+.....
T Consensus 170 ~m~ia~lvf~~g 181 (654)
T TIGR00926 170 LMILALIVFMAG 181 (654)
T ss_pred HHHHHHHHHHHh
Confidence 887766665543
No 166
>PRK10504 putative transporter; Provisional
Probab=99.30 E-value=7.6e-11 Score=107.83 Aligned_cols=133 Identities=20% Similarity=0.213 Sum_probs=110.2
Q ss_pred hhhhHh-HhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhh-hcchhHHHHHHHHH
Q 019567 5 VVPLAA-KFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAA-THSTASLLAVRAFF 82 (339)
Q Consensus 5 ~~~i~~-~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~r~l~ 82 (339)
.|...+ .+|.++.+.++....+.++..++.++.+++.||+|||+++..+..+..++..+..+.. .++.+.+.+..++.
T Consensus 284 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (471)
T PRK10504 284 TPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQ 363 (471)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHH
Confidence 444444 5899999999999999999889999999999999999999999888887776653321 23344445667888
Q ss_pred HhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccc
Q 019567 83 GLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGI 137 (339)
Q Consensus 83 G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w 137 (339)
|++.+...+....++.+..|+++++.+.++.+....+|..+|+.+++.+.+..++
T Consensus 364 g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 364 GMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 8998888889999999999999999999999999999999999999988776654
No 167
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.29 E-value=1e-10 Score=104.54 Aligned_cols=142 Identities=12% Similarity=0.125 Sum_probs=119.9
Q ss_pred CCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHhhhhcchhh
Q 019567 13 GWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGVAMPA 92 (339)
Q Consensus 13 ~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~~~~~~~ 92 (339)
+.+..+.|...+...+...++.+..|++.||+|+|+.+.++..+.++...+. ..++|.+.+++.++++|++.......
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~--~~~~~~~~~~~~~~l~g~~~~~~~~~ 327 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGS--SFATTALEVVILKMLHAFEVPFLLVG 327 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHH--HhcCChHHHHHHHHHHHHHHHHHHHH
Confidence 4455667888898889999999999999999999999999999888877776 44788888899999999998776666
Q ss_pred hHHHHhhhCCcchhhHHHHH-HHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHH
Q 019567 93 MSTLTSRWFPSHERASAIGI-CMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWT 156 (339)
Q Consensus 93 ~~~~i~~~~~~~~r~~~~~~-~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~ 156 (339)
...+..+..+++.++...+. .+....+|..+++.+++++.+..||+..|.+.+++.++..++..
T Consensus 328 ~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~~ 392 (396)
T TIGR00882 328 CFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLISV 392 (396)
T ss_pred HHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 77778888877777776665 67889999999999999999999999999999888877665543
No 168
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.28 E-value=4.8e-11 Score=109.02 Aligned_cols=147 Identities=18% Similarity=0.110 Sum_probs=102.7
Q ss_pred hHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcch-------HHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHH
Q 019567 8 LAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGK-------KVLAWGVALWSLSTLLTPWAATHSTASLLAVRA 80 (339)
Q Consensus 8 i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r-------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 80 (339)
+.+++|.+..+.+.+.+.+.++..++.++.|+++||++|| ........+.++..++. ...++.+..++.-+
T Consensus 279 l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~--~~~~~~~~~~~~~~ 356 (476)
T PLN00028 279 FYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWL--GRANSLGAAIVVMI 356 (476)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHh--cccchHHHHHHHHH
Confidence 4567899999999999999999999999999999999875 22223333333333333 33556555566666
Q ss_pred HHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhh
Q 019567 81 FFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSK 158 (339)
Q Consensus 81 l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~ 158 (339)
+.+++.+...+...+++.+.. +++|+...|+.+.+..+|..++|.+.+ ..+..+|+..|++.+++.++..+..++.
T Consensus 357 l~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~ 432 (476)
T PLN00028 357 LFSIFVQAACGATFGIVPFVS-RRSLGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFI 432 (476)
T ss_pred HHHHHHHHhhhhhcccCcccC-hhhchhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhe
Confidence 667766555555666666765 478999999988877777777776543 2234569999999887777765555443
No 169
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.27 E-value=9.3e-11 Score=106.19 Aligned_cols=159 Identities=12% Similarity=0.031 Sum_probs=108.9
Q ss_pred hhhh-HhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHH---HHHHHhhhhhcchhHHHHHHH
Q 019567 5 VVPL-AAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSL---STLLTPWAATHSTASLLAVRA 80 (339)
Q Consensus 5 ~~~i-~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~r~ 80 (339)
.|.. +++.|.|+.+.++....+.++..++.+..|+++||+++|+....+..+..+ +..........+.+.....-+
T Consensus 274 ~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (438)
T TIGR00712 274 SPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLVDMICMI 353 (438)
T ss_pred HHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHH
Confidence 3444 445789999999999999999999999999999999754322233322221 111110111223343334444
Q ss_pred HHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHH-HHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhc
Q 019567 81 FFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLG-NVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKV 159 (339)
Q Consensus 81 l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g-~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~ 159 (339)
..|.+.............|.+|+++|++++|+.+....+| ..++|.+.+.+.++.||...|++..+..++..+..+...
T Consensus 354 ~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 433 (438)
T TIGR00712 354 VIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVM 433 (438)
T ss_pred HHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHHH
Confidence 5555432222222346789999999999999998887776 578999999999999999999988887777777777777
Q ss_pred cCCC
Q 019567 160 TNDP 163 (339)
Q Consensus 160 ~~~~ 163 (339)
||++
T Consensus 434 ~~~~ 437 (438)
T TIGR00712 434 IGEK 437 (438)
T ss_pred hhcc
Confidence 7664
No 170
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.27 E-value=1.8e-10 Score=106.18 Aligned_cols=159 Identities=16% Similarity=0.103 Sum_probs=106.9
Q ss_pred hhhhHhHhCCCccchhH------------HHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhc--
Q 019567 5 VVPLAAKFGWSSSFLGI------------VQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATH-- 70 (339)
Q Consensus 5 ~~~i~~~~~~s~~~~g~------------~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~-- 70 (339)
.|.+.++.|.+..+.+. ......++..++.++.++++||+|||++++++..+.+++..+.++...+
T Consensus 311 ~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~ 390 (502)
T TIGR00887 311 QKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLS 390 (502)
T ss_pred cHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 56677788876543221 1233445666788899999999999999998888777766655332111
Q ss_pred chhHHHHHHHHHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhh----------ccchHH
Q 019567 71 STASLLAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLST----------IGISGP 140 (339)
Q Consensus 71 ~~~~~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~----------~~w~~~ 140 (339)
+...+...-+...++.....+....+.+|.+|.+.|+++.++.+....+|.+++|.+.+.+.+. .++...
T Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 470 (502)
T TIGR00887 391 THGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHV 470 (502)
T ss_pred hhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHH
Confidence 1111111111112222223456677789999999999999999999999999999999988773 345667
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCC
Q 019567 141 FILFSSLGLLWLSTWTSKVTNDPC 164 (339)
Q Consensus 141 f~~~~~~~~~~~~~~~~~~~~~~~ 164 (339)
|++.++.+++..+. .++.||++.
T Consensus 471 ~~i~~~~~~~~~i~-~~~lpEt~~ 493 (502)
T TIGR00887 471 LEIFALFMFLGILF-TLLIPETKG 493 (502)
T ss_pred HHHHHHHHHHHHHH-heEeccCCC
Confidence 88887777765554 356677654
No 171
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.26 E-value=2.7e-10 Score=101.26 Aligned_cols=151 Identities=13% Similarity=0.077 Sum_probs=112.1
Q ss_pred hhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHh
Q 019567 5 VVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGL 84 (339)
Q Consensus 5 ~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~ 84 (339)
.|.+.+++|.++.+.++..+...++..++.++.|++.||+|+|+.+..+..+..++.++... ..++.+...+..++.+.
T Consensus 223 ~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~ 301 (382)
T PRK10091 223 KPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFF-FGGMKTASLIFAFICCA 301 (382)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHH-HHhhHHHHHHHHHHHHH
Confidence 35566678999999999999999999999999999999999999999888887777755422 24555666666777777
Q ss_pred hhhcchhhhHH-HHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhh-ccchHHHHHHHHHHHHHHHHHHhh
Q 019567 85 AEGVAMPAMST-LTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLST-IGISGPFILFSSLGLLWLSTWTSK 158 (339)
Q Consensus 85 g~~~~~~~~~~-~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~-~~w~~~f~~~~~~~~~~~~~~~~~ 158 (339)
+.....+.... ...+..+++.++... .+....+|..+||.+++.+.+. .+|++.+.+.+.++++........
T Consensus 302 g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (382)
T PRK10091 302 GLFALSAPLQILLLQNAKGGELLGAAG--GQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLY 375 (382)
T ss_pred HHHhhhHHHHHHHHHhCCcchHHHHHH--HHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHHH
Confidence 66554444443 344444445555543 4667889999999999999985 689999999877766654444333
No 172
>PRK10054 putative transporter; Provisional
Probab=99.25 E-value=1.1e-10 Score=104.20 Aligned_cols=151 Identities=13% Similarity=0.070 Sum_probs=120.7
Q ss_pred HhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHhhhhcch
Q 019567 11 KFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGVAM 90 (339)
Q Consensus 11 ~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~~~~~ 90 (339)
+.+.+....++..+.+.......+++.|++.||+++|+.+..+..+..++.....+ ..++.+.+++..++.|+|.+...
T Consensus 238 ~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~ 316 (395)
T PRK10054 238 DSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIF-SGNSLLLWGMSAAVFTVGEIIYA 316 (395)
T ss_pred ccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHH-cchHHHHHHHHHHHHHHHHHHHH
Confidence 44556667788888888887888899999999999999999998888887766622 13577777888999999998888
Q ss_pred hhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhccCCC
Q 019567 91 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDP 163 (339)
Q Consensus 91 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~ 163 (339)
|.....+.+..|++.|+++.+..+ ...+|..+||.+++.+.|+.|....|++.+....+..++.....+|+|
T Consensus 317 p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (395)
T PRK10054 317 PGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLMLKGMRARP 388 (395)
T ss_pred hhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHHhccccCc
Confidence 888999999999999999988765 556899999999999999999888888876665555554444444444
No 173
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.24 E-value=6.5e-10 Score=99.55 Aligned_cols=147 Identities=18% Similarity=0.150 Sum_probs=107.2
Q ss_pred hhhHhHhCCCccchhHHHHHHH-HHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhh-hhh-cchhHHHHHH---
Q 019567 6 VPLAAKFGWSSSFLGIVQSSFL-WGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPW-AAT-HSTASLLAVR--- 79 (339)
Q Consensus 6 ~~i~~~~~~s~~~~g~~~s~~~-~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~r--- 79 (339)
+.+.+++|.++++.+++.+... .+..++.++.|++.||+|+|+.+..+..+..+..+.... +.. ++.+.+++.-
T Consensus 234 ~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 313 (402)
T PRK11902 234 TFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIE 313 (402)
T ss_pred HHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Confidence 4567779999999999987654 568899999999999999999888777766655433211 222 4555555554
Q ss_pred -HHHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHH
Q 019567 80 -AFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWT 156 (339)
Q Consensus 80 -~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~ 156 (339)
+..|++.+...+....++.+.+|.+++ +..+...++|...++.+++.+.+.+||+..|.+.+.++++..++.+
T Consensus 314 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~ 387 (402)
T PRK11902 314 NLCGGMGTAAFVALLMALCNRSFSATQY----ALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLW 387 (402)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCcHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 345566666677777788887775554 4455556777777778899999999999999998888877655543
No 174
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.24 E-value=1.7e-10 Score=103.14 Aligned_cols=148 Identities=18% Similarity=0.182 Sum_probs=115.9
Q ss_pred hhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhh-hcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHH
Q 019567 5 VVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDK-YGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFG 83 (339)
Q Consensus 5 ~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr-~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G 83 (339)
.|...+|.+.++.+.+++.+...++......+.+++.|| ++.|+.+..+..+.+++.... ..+++++.+.+...+.|
T Consensus 231 ~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~l~~ 308 (400)
T PRK11646 231 LPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPI--GMVSNLQQLFTLICLFY 308 (400)
T ss_pred hhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHH--HHhhhHHHHHHHHHHHH
Confidence 466556665577889999888887777666666777765 666777778887888777766 44788887878888899
Q ss_pred hhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhc---cc-hHHHHHHHHHHHHHHHH
Q 019567 84 LAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTI---GI-SGPFILFSSLGLLWLST 154 (339)
Q Consensus 84 ~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~---~w-~~~f~~~~~~~~~~~~~ 154 (339)
++.+...|...+++.|..|+++|++.+|+.+....+|..+||.+++.+.++. +. ..++...++++++..+.
T Consensus 309 ~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (400)
T PRK11646 309 IGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLA 383 (400)
T ss_pred HHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHH
Confidence 9988888999999999999999999999999999999999999999998864 33 45555555555554443
No 175
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.23 E-value=1.5e-10 Score=104.79 Aligned_cols=122 Identities=17% Similarity=0.206 Sum_probs=103.5
Q ss_pred CccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHhhhhcchhhhH
Q 019567 15 SSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGVAMPAMS 94 (339)
Q Consensus 15 s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~~~~~~~~~ 94 (339)
++.+.+++.+...++..++.++.++++||+|+|+++..+..+..++.+...+. .++.+.+++..++.|++.+...+...
T Consensus 255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~ 333 (437)
T TIGR00792 255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFA-GSNLPLILVLIILAGFGQNFVTGLVW 333 (437)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHc-chhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667788888899999999999999999999999999988888877766321 24667777888899999999889999
Q ss_pred HHHhhhCC-------cchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccc
Q 019567 95 TLTSRWFP-------SHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGI 137 (339)
Q Consensus 95 ~~i~~~~~-------~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w 137 (339)
++++|..| ++++|...|+.+....+|..+++.+.+.+.+..||
T Consensus 334 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~ 383 (437)
T TIGR00792 334 ALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGY 383 (437)
T ss_pred HHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99988865 45679999999999999999999999999887776
No 176
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.23 E-value=8.2e-10 Score=98.53 Aligned_cols=146 Identities=21% Similarity=0.188 Sum_probs=116.9
Q ss_pred hhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHH-HHHHhhhhhcchhHHHHHHHHHH
Q 019567 5 VVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLS-TLLTPWAATHSTASLLAVRAFFG 83 (339)
Q Consensus 5 ~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~r~l~G 83 (339)
.|.+.+++|.++++.+.....+.++..++.++.+++.||.+ |+.+..+..+..+. .++. ...++.+.+.+..++.|
T Consensus 240 ~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~-~~~l~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~l~G 316 (394)
T PRK10213 240 RPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSV-KLALAGAPLVLAVSALVLT--LWGSDKIVATGVAIIWG 316 (394)
T ss_pred HHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccc-hhHHHHHHHHHHHHHHHHH--HHhhhHHHHHHHHHHHH
Confidence 36677889999999999999999999999999999999964 44444444443333 3433 23567778888899999
Q ss_pred hhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHH
Q 019567 84 LAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLST 154 (339)
Q Consensus 84 ~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~ 154 (339)
++.+...+...+.+.+..| +++++..+......++|..+|+.+++.+.+..|++..+...+.+.++..+.
T Consensus 317 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~ 386 (394)
T PRK10213 317 LTFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLTALL 386 (394)
T ss_pred HHHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHHHHH
Confidence 9999999999989999886 567788888888899999999999999999999999998877766554433
No 177
>TIGR00895 2A0115 benzoate transport.
Probab=99.22 E-value=1.9e-10 Score=102.60 Aligned_cols=125 Identities=22% Similarity=0.330 Sum_probs=105.3
Q ss_pred hhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHh
Q 019567 5 VVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGL 84 (339)
Q Consensus 5 ~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~ 84 (339)
.|.+.+++|.++.+.++..+...++..++.++.|++.||+|||+.+..... ..+...+.. ...++.+..++..++.|+
T Consensus 273 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~g~ 350 (398)
T TIGR00895 273 LPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLL-GAVFAVLVG-STLFSPTLLLLLGAIAGF 350 (398)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHH-HHHHHHHHH-HHhhCHHHHHHHHHHHHH
Confidence 467788899999999999999999999999999999999999955444433 333333331 225677778888999999
Q ss_pred hhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHh
Q 019567 85 AEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIM 131 (339)
Q Consensus 85 g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l 131 (339)
+.+...+...+++.|.+|+++|++++|+......+|..++|.+++.+
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 351 FVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 99999999999999999999999999999999999999999998875
No 178
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.22 E-value=6.5e-10 Score=100.51 Aligned_cols=151 Identities=16% Similarity=0.130 Sum_probs=96.9
Q ss_pred hhh-hHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhh--hcchhHHHHHHHH
Q 019567 5 VVP-LAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAA--THSTASLLAVRAF 81 (339)
Q Consensus 5 ~~~-i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~r~l 81 (339)
+|. +++++|.+..+.+...+...++..+++++.|+++||+|||+.+..+.++..+......... .++....+..-.+
T Consensus 266 lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (432)
T PRK10406 266 MQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMC 345 (432)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHH
Confidence 344 4566899988999999988888899999999999999999988776655433332110011 1222222222222
Q ss_pred HHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHH-HHHHHHhHHHHhhhhcc-chHHHHHHHHHHHHHHHHHH
Q 019567 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHL-GNVVGLLLTPIMLSTIG-ISGPFILFSSLGLLWLSTWT 156 (339)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~l~~~l~~~~~-w~~~f~~~~~~~~~~~~~~~ 156 (339)
.+...+...+....+++|++|+|.|+.++|+.+...++ .....|.+.+.+ +..| |...++..++..++..+..+
T Consensus 346 ~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~g~~~~~~~~~~~~~~i~~~~~~ 421 (432)
T PRK10406 346 ALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL-KSIGMETAFFWYVTLMAVVAFLVSL 421 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH-HHhCCCcHHHHHHHHHHHHHHHHHH
Confidence 33333444456678899999999999999998765553 344477777755 4445 55556655555555444444
No 179
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.22 E-value=1.3e-10 Score=99.72 Aligned_cols=155 Identities=19% Similarity=0.104 Sum_probs=121.3
Q ss_pred hhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhh--cchHHHHHHHHHHHHHH-HHHhhhhhcchhHHHHHHHHHH
Q 019567 7 PLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKY--GGKKVLAWGVALWSLST-LLTPWAATHSTASLLAVRAFFG 83 (339)
Q Consensus 7 ~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~--G~r~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~r~l~G 83 (339)
.+.|+.|.|..+.++..+.|-.+...+++++|+++||+ |||....+...+....+ +..-++..+|+.+..++-++.|
T Consensus 278 YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iG 357 (448)
T COG2271 278 YLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIG 357 (448)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHH
Confidence 46678899999999999999999999999999999997 67765554443333333 3331222345688888888889
Q ss_pred hhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHH-HHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhccC
Q 019567 84 LAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHL-GNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTN 161 (339)
Q Consensus 84 ~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~ 161 (339)
+..-+-.-.......|..|++.-|.+.|+...+..+ |...+....+++.|.+||...|.+..+.+++..++.....+.
T Consensus 358 f~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~~~~ 436 (448)
T COG2271 358 FLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLPVWNA 436 (448)
T ss_pred HHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHHHHhh
Confidence 877665566667788999999999999999999999 999999999999999999999999887777766555544443
No 180
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.21 E-value=8.1e-10 Score=90.48 Aligned_cols=160 Identities=21% Similarity=0.164 Sum_probs=122.8
Q ss_pred CcchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhh-----cchhHHH
Q 019567 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAAT-----HSTASLL 76 (339)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 76 (339)
+..-|++++.+|+|.+|...+.+.-.+|..+ .++.|.+.||+|++.++.+|.+...+|..+..++.. .++|.+.
T Consensus 22 s~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~ 100 (250)
T PF06813_consen 22 SAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMC 100 (250)
T ss_pred hhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHH
Confidence 3456889999999999999999999999886 588999999999999999999999999988744322 4567888
Q ss_pred HHHHHHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHH
Q 019567 77 AVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWT 156 (339)
Q Consensus 77 ~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~ 156 (339)
+..++.|.+.+...+.+.....+.|| ++||++.|+.-...+++..+-..+...+.+. +-...++..+....+..+...
T Consensus 101 ~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~-~~~~fll~la~~~~~v~l~~~ 178 (250)
T PF06813_consen 101 LFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGD-DPSSFLLFLAVLPAVVCLVAM 178 (250)
T ss_pred HHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCC-ChHHHHHHHHHHHHHHHHHHh
Confidence 88888888877777777777778897 6899999999999999988887776666554 333334444554444444444
Q ss_pred hhccCCCC
Q 019567 157 SKVTNDPC 164 (339)
Q Consensus 157 ~~~~~~~~ 164 (339)
.+.++.|+
T Consensus 179 ~~vr~~~~ 186 (250)
T PF06813_consen 179 FFVRPVPP 186 (250)
T ss_pred hheeccCC
Confidence 44444443
No 181
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.19 E-value=6.4e-10 Score=97.27 Aligned_cols=148 Identities=11% Similarity=0.122 Sum_probs=128.5
Q ss_pred ccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHhhhhcchhhhHH
Q 019567 16 SSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGVAMPAMST 95 (339)
Q Consensus 16 ~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~~~~~~~~~~ 95 (339)
....|.+.+...+.-++...+..++.+|+|.|+.++++..+.++=-.++ ++++|.+.+.+.+.+.|+-.+........
T Consensus 258 ~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~--~~~~~~~~i~~~klLH~~e~~l~lva~fk 335 (412)
T PF01306_consen 258 NQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGS--GFATNPWVISLIKLLHALEFPLLLVAAFK 335 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH--HT--SHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHH--hhhcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3558999999999999999999999999999999999999999988888 55899999999999999999999999999
Q ss_pred HHhhhCCcchhhHHHHHH-HHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhccCCCCC
Q 019567 96 LTSRWFPSHERASAIGIC-MGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCN 165 (339)
Q Consensus 96 ~i~~~~~~~~r~~~~~~~-~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 165 (339)
++++.+|+|..++...+. +...++|..+.+.++|.+.|+.|.+..|++.+.+.+...++..+.+++++++
T Consensus 336 YI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~~~ 406 (412)
T PF01306_consen 336 YITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDKKQ 406 (412)
T ss_dssp HHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SSST
T ss_pred HHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCCCcc
Confidence 999999988888888774 7889999999999999999999999999999998888788777777665543
No 182
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.18 E-value=3.7e-10 Score=97.07 Aligned_cols=143 Identities=20% Similarity=0.259 Sum_probs=125.0
Q ss_pred HhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHhhhhc
Q 019567 9 AAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGV 88 (339)
Q Consensus 9 ~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~~~ 88 (339)
..++|++..+...+.-...+..++++++.|++.||+|.|+++..+.++..+.++.. .+...-..+.++-.+.|...|.
T Consensus 280 ~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~--~~~~~~~~f~i~gll~g~s~G~ 357 (438)
T COG2270 280 AADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYL--IFLEGELDFWILGLLVGTSLGG 357 (438)
T ss_pred HHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHH--HHccccHHHHHHHHHHHHhcch
Confidence 35899999999999999999999999999999999999999999999999888876 4566667778888999999999
Q ss_pred chhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhcc-chHHHHHHHHHHHHHHH
Q 019567 89 AMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIG-ISGPFILFSSLGLLWLS 153 (339)
Q Consensus 89 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~-w~~~f~~~~~~~~~~~~ 153 (339)
.+..+-++..+..|+++-++.+|+++.....+..+||.+.+.+.+..| -|..+....++..+..+
T Consensus 358 ~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~ 423 (438)
T COG2270 358 AQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLL 423 (438)
T ss_pred HHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHh
Confidence 999999999999999999999999999999999999999998887543 66666665555444433
No 183
>TIGR00898 2A0119 cation transport protein.
Probab=99.17 E-value=9.9e-10 Score=101.42 Aligned_cols=139 Identities=17% Similarity=0.149 Sum_probs=109.0
Q ss_pred HHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcch--hHHHHHHHHHHhhhhcchhhhHHHHh
Q 019567 21 IVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHST--ASLLAVRAFFGLAEGVAMPAMSTLTS 98 (339)
Q Consensus 21 ~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~r~l~G~g~~~~~~~~~~~i~ 98 (339)
+......+....+.++.+++.||+|||+.+..+.++.+++.++..+ .++. +...+.-++.+++.+..++....+..
T Consensus 359 ~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (505)
T TIGR00898 359 LDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLF--VPVDLYFLRTALAVLGKFGITSAFQMVYLYTA 436 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH--cCCCchHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3344555667788899999999999999999999988888877733 4433 45556667777777778888899999
Q ss_pred hhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhccCCCC
Q 019567 99 RWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPC 164 (339)
Q Consensus 99 ~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~ 164 (339)
|.+|++.|++++|+.+....+|.+++|.+.+ + +..++..++.+.+...++..+... +.||++.
T Consensus 437 e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~-~lpet~~ 499 (505)
T TIGR00898 437 ELYPTVVRNLGVGVCSTMARVGSIISPFLVY-L-GEKWLFLPLVLFGGLALLAGILTL-FLPETKG 499 (505)
T ss_pred ccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-H-HHHHHhhHHHHHHHHHHHHHHHHH-cCcCCCC
Confidence 9999999999999999999999999999988 4 445677888888877776655544 4566543
No 184
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.17 E-value=1.3e-09 Score=97.19 Aligned_cols=144 Identities=17% Similarity=0.111 Sum_probs=113.2
Q ss_pred hhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHhhh
Q 019567 7 PLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAE 86 (339)
Q Consensus 7 ~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~ 86 (339)
.+++.+|.|+.+.|++.+.+.++..++++..+++.||.++|+.+..+.. .++..... ...++.+...+.-++.|++.
T Consensus 231 ~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~--~~~~~~~~~~~~~~~~G~~~ 307 (393)
T PRK11195 231 WAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGIL-MGLVVLLM--ALQHSLLPAYPLLILIGALG 307 (393)
T ss_pred HHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHH-HHHHHHHH--HHHhHHHHHHHHHHHHHHhh
Confidence 3567789999999999999999999999999999999999988887753 34444444 33667777778888999999
Q ss_pred hcchhhhHHHHhhhCCcch-hhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHH
Q 019567 87 GVAMPAMSTLTSRWFPSHE-RASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLST 154 (339)
Q Consensus 87 ~~~~~~~~~~i~~~~~~~~-r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~ 154 (339)
+...+...+.+.|..|+++ +|++.++.+...++|..++..+.+.+ +..|-+..+.+.+...++...+
T Consensus 308 g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 375 (393)
T PRK11195 308 GFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VKLGVPVVAVIVGFGLLVALAM 375 (393)
T ss_pred hhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHH
Confidence 9888888888888766554 79999999999999999999998865 5667666666544433333333
No 185
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.16 E-value=2.4e-09 Score=94.96 Aligned_cols=155 Identities=23% Similarity=0.312 Sum_probs=123.8
Q ss_pred hhhHhHhC-CCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhh-cchhHHHH----HH
Q 019567 6 VPLAAKFG-WSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAAT-HSTASLLA----VR 79 (339)
Q Consensus 6 ~~i~~~~~-~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~----~r 79 (339)
+..-+|.| .+....+.+.+...++-.+.-...+++..|+|.|+++.++.+.+++=..+. +.. ++.+...+ ..
T Consensus 231 ~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~--a~~~~~~~~~~~~~~l~q 308 (400)
T PF03825_consen 231 SIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLY--AYFSDPWPFIVALQLLGQ 308 (400)
T ss_pred HHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH--HHhcCCcHHHHHHHHHHH
Confidence 34456666 677777888888888888999999999999999999999999988877777 334 55444333 34
Q ss_pred HHHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHH-HHHHHHHHHHhHHHHhhhhcc------chHHHHHHHHHHHHHH
Q 019567 80 AFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMG-GFHLGNVVGLLLTPIMLSTIG------ISGPFILFSSLGLLWL 152 (339)
Q Consensus 80 ~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~g~~~~~~l~~~l~~~~~------w~~~f~~~~~~~~~~~ 152 (339)
.++|+..+..+..+..++.+..|++.|+++.++++. ..++|..+|..++|++.|++| |...+.+.+++.++..
T Consensus 309 ~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~ 388 (400)
T PF03825_consen 309 LLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVIL 388 (400)
T ss_pred hhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHH
Confidence 569999999999999999999999999999999876 568999999999999999765 4456666777666666
Q ss_pred HHHHhhccCC
Q 019567 153 STWTSKVTND 162 (339)
Q Consensus 153 ~~~~~~~~~~ 162 (339)
+++..+.+|+
T Consensus 389 ~~f~~~fk~~ 398 (400)
T PF03825_consen 389 VLFVILFKPK 398 (400)
T ss_pred HHHHhhccCC
Confidence 6666555544
No 186
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.15 E-value=3.4e-09 Score=94.60 Aligned_cols=160 Identities=18% Similarity=0.208 Sum_probs=127.6
Q ss_pred hhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhh-hcchh------HHHHHH
Q 019567 7 PLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAA-THSTA------SLLAVR 79 (339)
Q Consensus 7 ~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~-~~~~~------~~~~~r 79 (339)
++-++-|++..+..+.+........+..+.+..+.||+|||+.++.+..+..+..++..... ..+.. ..+++.
T Consensus 295 ~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~ 374 (485)
T KOG0569|consen 295 SIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAI 374 (485)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 45667789999999999999999999999999999999999999999999888887763321 11111 123444
Q ss_pred HHHHhhhhc-chhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhh
Q 019567 80 AFFGLAEGV-AMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSK 158 (339)
Q Consensus 80 ~l~G~g~~~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~ 158 (339)
++..+..+. .-|...-+.+|.+|++.|..++++......+...+-...-..+.+..|= +.|+...+.+++..+..++.
T Consensus 375 ~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~ 453 (485)
T KOG0569|consen 375 FLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRY 453 (485)
T ss_pred HHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHh
Confidence 444443333 3478888999999999999999999999999888888777778777775 88888889999999999999
Q ss_pred ccCCCCCCC
Q 019567 159 VTNDPCNSP 167 (339)
Q Consensus 159 ~~~~~~~~~ 167 (339)
+||++.+..
T Consensus 454 lPETkgr~~ 462 (485)
T KOG0569|consen 454 LPETKGRTP 462 (485)
T ss_pred CcccCCCCH
Confidence 999986543
No 187
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.14 E-value=9.4e-10 Score=111.49 Aligned_cols=143 Identities=19% Similarity=0.226 Sum_probs=120.5
Q ss_pred hhhHhHhCCCcc-chhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHh
Q 019567 6 VPLAAKFGWSSS-FLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGL 84 (339)
Q Consensus 6 ~~i~~~~~~s~~-~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~ 84 (339)
+.+.+++|.+.. +.+++.+...++..+++++.|++.||+++|+.+.++.++.+++.++. ...++.+.+++..++.|+
T Consensus 257 ~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~ 334 (1146)
T PRK08633 257 AYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLL--PTAPSLASVLVLFFLFGF 334 (1146)
T ss_pred HHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHH--HHhhhHHHHHHHHHHHHH
Confidence 345677899998 99999999999999999999999999999999998888888877777 446788888899999999
Q ss_pred hhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhh-hccchHHHHHHHHHHHH
Q 019567 85 AEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLS-TIGISGPFILFSSLGLL 150 (339)
Q Consensus 85 g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~-~~~w~~~f~~~~~~~~~ 150 (339)
+.+...+...+++.+..|+++||+++++.+....+|..+++.+++.+.. .+++...|++.+.+.++
T Consensus 335 ~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 401 (1146)
T PRK08633 335 SAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTLI 401 (1146)
T ss_pred HHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 9999889999999999999999999999999999999888888776654 23555666665554443
No 188
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.13 E-value=6.9e-10 Score=99.63 Aligned_cols=142 Identities=18% Similarity=0.172 Sum_probs=99.3
Q ss_pred hhhhHhHh--CCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHH-HHHHHHHHHHHHHHHhhhhhcchhHHHHHHHH
Q 019567 5 VVPLAAKF--GWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKV-LAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (339)
Q Consensus 5 ~~~i~~~~--~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l 81 (339)
+|.+.+++ +.++.+.+...+...++..++.+..|+++||+++|+. ......+..++..+. ...++....+.+-.+
T Consensus 265 ~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 342 (412)
T TIGR02332 265 TPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLLA--SATDHNLIQLLGIIM 342 (412)
T ss_pred HHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHHH--HhcCCHHHHHHHHHH
Confidence 56666665 5677888999999999999999999999999997774 344444444433222 112222222222233
Q ss_pred HHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhcc-chHHHHHHHHHH
Q 019567 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIG-ISGPFILFSSLG 148 (339)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~-w~~~f~~~~~~~ 148 (339)
.++|.....+.......|.+|+|+|++++|+.+....+|..++|.+.+.+.+..| |++.|++.++..
T Consensus 343 ~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~~ 410 (412)
T TIGR02332 343 ASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLWFVAALL 410 (412)
T ss_pred HHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHHHH
Confidence 3333333334444555678899999999999999999999999999999999774 999988766543
No 189
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.13 E-value=5.8e-10 Score=98.71 Aligned_cols=134 Identities=16% Similarity=0.102 Sum_probs=100.0
Q ss_pred hHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcc-hHHHH-HHHHH-HHHHHHHHhhhhhcchhHHHHHHHHHHh
Q 019567 8 LAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGG-KKVLA-WGVAL-WSLSTLLTPWAATHSTASLLAVRAFFGL 84 (339)
Q Consensus 8 i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~-r~~l~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~r~l~G~ 84 (339)
+++++|.++.+.++..+.+.++..++.++.|++.||..+ |+... ..... ..++..........+.....+..++.|.
T Consensus 243 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 322 (379)
T TIGR00881 243 LTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAANPLMDLICLFALGF 322 (379)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHH
Confidence 456789999999999999999999999999999998643 33222 22111 1111111100112345556667777777
Q ss_pred hhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHH
Q 019567 85 AEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPF 141 (339)
Q Consensus 85 g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f 141 (339)
......+....++.|.+|+++|+++.++.+....+|..++|.+.+.+.++.||++.|
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 323 LVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred HHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 665556666788999999999999999999999999999999999999999998764
No 190
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.13 E-value=1.1e-09 Score=96.28 Aligned_cols=129 Identities=16% Similarity=0.081 Sum_probs=103.9
Q ss_pred hhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhh-cchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHH
Q 019567 5 VVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKY-GGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFG 83 (339)
Q Consensus 5 ~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~-G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G 83 (339)
+|.+.+|.|.|+.+.+...+.+.++..++.++.|++.||+ +||+.+..+..+..++.+.. ...++..... .-++.|
T Consensus 220 lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~l~g 296 (355)
T TIGR00896 220 LPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGL--LFAPMHGLWA-WALVLG 296 (355)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHH--HHhhhhHHHH-HHHHHH
Confidence 5667778899999999999999999999999999999999 56677777777777777666 3334333222 457889
Q ss_pred hhhhcchhhhHHHHhhhCC-cchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhcc
Q 019567 84 LAEGVAMPAMSTLTSRWFP-SHERASAIGICMGGFHLGNVVGLLLTPIMLSTIG 136 (339)
Q Consensus 84 ~g~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~ 136 (339)
++.+...+...+.+.+..+ +++++...++.+....+|..++|.+.+.+.|+.|
T Consensus 297 ~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 297 LGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999888888777766554 4667899999998889999999999999998775
No 191
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=99.12 E-value=3.9e-08 Score=87.21 Aligned_cols=307 Identities=10% Similarity=-0.006 Sum_probs=171.4
Q ss_pred HHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhh----hhh--c----chhHHHHHH---HHHHhhhhc-ch
Q 019567 25 SFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPW----AAT--H----STASLLAVR---AFFGLAEGV-AM 90 (339)
Q Consensus 25 ~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~----~~~--~----~~~~~~~~r---~l~G~g~~~-~~ 90 (339)
.-.+...+.++..|.+.||..|.++...+.+.--++...+.. .+. + +-+...... .+.|.-.-. ..
T Consensus 46 ~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~ 125 (432)
T PF06963_consen 46 VRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASI 125 (432)
T ss_pred HHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHh
Confidence 334556788899999999999999888776554433333211 111 1 112222111 122211111 11
Q ss_pred hhhHHHHhhhC------CcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhcc----
Q 019567 91 PAMSTLTSRWF------PSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVT---- 160 (339)
Q Consensus 91 ~~~~~~i~~~~------~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~---- 160 (339)
....++=.||. +++.+.+..+...-.=-+.-+++|++.|.+.+..+.+....+.++..++...+-+++..
T Consensus 126 ~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~ 205 (432)
T PF06963_consen 126 ANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFLLARVYN 205 (432)
T ss_pred hhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11222224443 23456666777776777789999999999999889888888888777775554443321
Q ss_pred CCCC---CCCCCChHHHHHHHhCCccc-----------cccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhh
Q 019567 161 NDPC---NSPFVSKSELRLIQAGKSDS-----------VKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIY 226 (339)
Q Consensus 161 ~~~~---~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (339)
+.|+ +++..++++.+..++.++++ .-+.....|+.-++.|.+. ..+...+.++...++...+..|
T Consensus 206 ~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~Y~~q~vfl-as~alalLY~TVLsf~~lmt~y 284 (432)
T PF06963_consen 206 SVPALAVKKRSSESESSSDEESSSESSSDPSILKRLWNPLRTIIRGWRTYFRQPVFL-ASFALALLYFTVLSFGGLMTAY 284 (432)
T ss_pred hChHhcCCCCCccccccccccccccccchhhHHHHHHHHHHHHhccHHHHHhCHHHH-HHHHHHHHHHHHhcCcHHHHHH
Confidence 1221 11111111000000000000 0011123455566655444 4455555555566778888999
Q ss_pred hhhhhCCccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhcccch--hHHHHH
Q 019567 227 FNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSP--AVAAVL 304 (339)
Q Consensus 227 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 304 (339)
+.++ |+++...|.+-+...+.++.+.++.+++.+|+|..+. ..+.+..-..+...+...+....++ ......
T Consensus 285 l~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~-----G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~ 358 (432)
T PF06963_consen 285 LKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRA-----GLWSLWWQWVCLALCVVSFWAPGSPFSSISAYL 358 (432)
T ss_pred HHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhh-----HHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHH
Confidence 9996 9999999999999999999999999999999986511 1233333333444444444433322 222222
Q ss_pred HHHHHH----Hhhhcccchhhhhh--hcccchhhhhhhhc
Q 019567 305 ITIALS----LSSFSQAGYLLNIQ--IAQDFSTALQIQQE 338 (339)
Q Consensus 305 ~~~~~~----~~~~~~~~~~~~~~--~~p~~~g~~~g~q~ 338 (339)
+..+.. ..-.+.....-..+ +.+++||.++|.|+
T Consensus 359 l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~ 398 (432)
T PF06963_consen 359 LLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQN 398 (432)
T ss_pred HHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHH
Confidence 222222 22333444444555 77789999999985
No 192
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.11 E-value=7.6e-10 Score=100.73 Aligned_cols=153 Identities=18% Similarity=0.172 Sum_probs=136.2
Q ss_pred chhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhc--chHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHH
Q 019567 4 AVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYG--GKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (339)
Q Consensus 4 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G--~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l 81 (339)
.+|...++.+.++.+.+.+.++..+...++.++.|+++|+.. ++.+..++.+..+++...+ .+.++++.++..-.+
T Consensus 320 ~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~--p~~~~~~~l~~~~~~ 397 (509)
T KOG2504|consen 320 YLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFL--PFATTYVGLIVFSIL 397 (509)
T ss_pred HHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHH--HHhccHHHHHHHHHH
Confidence 467888899999999999999999999999999999999988 5567777888888888778 558999999999999
Q ss_pred HHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhcc-chHHHHHHHHHHHHHHHHHHhh
Q 019567 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIG-ISGPFILFSSLGLLWLSTWTSK 158 (339)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~-w~~~f~~~~~~~~~~~~~~~~~ 158 (339)
.|++.|........++.|..+.++-..+.|+.....+++..+||++++.+.+..+ |...|+..++..++....++..
T Consensus 398 fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~ 475 (509)
T KOG2504|consen 398 FGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLIL 475 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHh
Confidence 9999999888888899999999999999999999999999999999999988776 9999999888877766555443
No 193
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.11 E-value=2.6e-09 Score=91.85 Aligned_cols=130 Identities=19% Similarity=0.202 Sum_probs=106.5
Q ss_pred HhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHhhhhcch
Q 019567 11 KFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGVAM 90 (339)
Q Consensus 11 ~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~~~~~ 90 (339)
++|.++++.+...+.+..+..++.+..+++.||+|+|+.+.++..+..++.++. ...++.. ...+-++.|++.+..+
T Consensus 172 ~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~--~~~~~~~-~~~~~~l~g~~~s~i~ 248 (310)
T TIGR01272 172 ALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGA--ALTHGYV-AMWFVLALGLFNSIMF 248 (310)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH--HHcCCHH-HHHHHHHHHHHHHHHH
Confidence 368999999999999999999999999999999999999988888877776655 3334433 2345668899999999
Q ss_pred hhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHH
Q 019567 91 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFS 145 (339)
Q Consensus 91 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~ 145 (339)
|...+...+..|+ +.+++.++. ....+|..+.|++.|.+.|..|.+..|++..
T Consensus 249 P~~~s~a~~~~~~-~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~ 301 (310)
T TIGR01272 249 PTIFSLALNALGR-HTSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPV 301 (310)
T ss_pred HHHHHHHHhhhhh-hhhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHH
Confidence 9999999888864 455666665 5667899999999999999999999887544
No 194
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.09 E-value=1.7e-09 Score=99.33 Aligned_cols=127 Identities=18% Similarity=0.276 Sum_probs=109.5
Q ss_pred hHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhh--hhcchhHHHHHHHHHHhh
Q 019567 8 LAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWA--ATHSTASLLAVRAFFGLA 85 (339)
Q Consensus 8 i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~r~l~G~g 85 (339)
+++.+|.++.+.++......++..++.++.|++.||+|||+.+..+..+..++..+..+. ...+.+.+....++.|++
T Consensus 282 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g 361 (485)
T TIGR00711 282 LQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFG 361 (485)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHH
Confidence 345589999999999999999999999999999999999999999998888888776311 123556677778999999
Q ss_pred hhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhh
Q 019567 86 EGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLST 134 (339)
Q Consensus 86 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~ 134 (339)
.+...+.......+..|+++|+++.++.+....+|..+|+.+.+.+.++
T Consensus 362 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 362 MGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988888888888889999999999999999999999999999888765
No 195
>PRK09848 glucuronide transporter; Provisional
Probab=99.09 E-value=2.6e-09 Score=97.08 Aligned_cols=128 Identities=20% Similarity=0.191 Sum_probs=101.0
Q ss_pred hHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHhhhhcc
Q 019567 10 AKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGVA 89 (339)
Q Consensus 10 ~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~~~~ 89 (339)
+.+|.++...++......++..++.++.+++.||+|+|+.+.++..+..++.+...+...++.+.+++..++.|+|.+..
T Consensus 257 ~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~ 336 (448)
T PRK09848 257 YVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVT 336 (448)
T ss_pred eecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHH
Confidence 34565554444444444677788999999999999999999999988888877763322346677777888999999999
Q ss_pred hhhhHHHHhhhCCcc-------hhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccc
Q 019567 90 MPAMSTLTSRWFPSH-------ERASAIGICMGGFHLGNVVGLLLTPIMLSTIGI 137 (339)
Q Consensus 90 ~~~~~~~i~~~~~~~-------~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w 137 (339)
.+...++..|..|.+ ++|...+..+....+|..+++.+.+.+.+..|+
T Consensus 337 ~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 337 MTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999998887643 358899999999999999999999888766554
No 196
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.07 E-value=5.3e-09 Score=93.34 Aligned_cols=133 Identities=17% Similarity=0.135 Sum_probs=93.0
Q ss_pred hHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHhhhh
Q 019567 8 LAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEG 87 (339)
Q Consensus 8 i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~~ 87 (339)
.++++|.++.+.+...+...++..++.++.+++.||+|||+.+..+..+..++.+.. ...++.+..+..-.+.+.|.+
T Consensus 230 ~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~g~~ 307 (392)
T PRK10473 230 LMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITL--ALSPSHAVSLFGITLICAGFS 307 (392)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHH
Confidence 457789999999999999999999999999999999999999999998888887776 334444444444444444444
Q ss_pred cchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHH
Q 019567 88 VAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSL 147 (339)
Q Consensus 88 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~ 147 (339)
...+. ....+..|.++|+ +..+....++..+++.+++++.+..|+.......+.+
T Consensus 308 ~~~~~--~~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~g~~~~~~~~~~~ 362 (392)
T PRK10473 308 VGFGV--AMSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAVLGISAWNMLIGIL 362 (392)
T ss_pred HHhHH--HHHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHH
Confidence 33333 2334444544443 3444455677778888888888888877655554443
No 197
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=99.07 E-value=4.7e-07 Score=81.37 Aligned_cols=256 Identities=9% Similarity=-0.032 Sum_probs=153.8
Q ss_pred hhhHhHhCC-----CccchhHHHHHHHHHHHHH-HhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcc--------
Q 019567 6 VPLAAKFGW-----SSSFLGIVQSSFLWGYIFS-SVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHS-------- 71 (339)
Q Consensus 6 ~~i~~~~~~-----s~~~~g~~~s~~~~~~~i~-~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~-------- 71 (339)
-++++++.. +.+.+.++.+...+...+. .++.+++++|++|++.+-.....+.....++++..-++
T Consensus 27 R~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~ 106 (472)
T TIGR00769 27 RDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTA 106 (472)
T ss_pred HhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcH
Confidence 345666655 2357889999887777666 89999999999999999888777777666664432111
Q ss_pred ---------------------hhHHHHHHHHHHhhhhcchh-hhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHH
Q 019567 72 ---------------------TASLLAVRAFFGLAEGVAMP-AMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTP 129 (339)
Q Consensus 72 ---------------------~~~~~~~r~l~G~g~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~ 129 (339)
.|...+..+...+-...... .-....+|.++.+|-.|..++...+.++|..+++.+..
T Consensus 107 ~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~ 186 (472)
T TIGR00769 107 LADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIK 186 (472)
T ss_pred HHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22233333444444444444 66888999999999999999999999999999999988
Q ss_pred Hhhhh-------c-cch----HHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChHHHHHHHhCCccccccCCCccHHHHh
Q 019567 130 IMLST-------I-GIS----GPFILFSSLGLLWLSTWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLL 197 (339)
Q Consensus 130 ~l~~~-------~-~w~----~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (339)
++.+. . .|. ..+.+.++.+.+.........++. ..++...+.++ ++++++++.......+.++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~----~~~k~k~k~~~~es~k~i~ 261 (472)
T TIGR00769 187 YFSKLRASLGPGVDGWHVSLKNLMVIVICSGLAIILLYWWVNRNV-LTDPRSYNPAL----KEKKVKPKMSTMESLKFLV 261 (472)
T ss_pred HHHHhhhccccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cCCccccchhh----ccccCCCCCCHHHHHHHHH
Confidence 87631 1 242 233333333333333333332222 21111111110 1111111222234677889
Q ss_pred cchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccchh---hHhhHHhHHHHHHHHhhhhhhhHHHHHh
Q 019567 198 SKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQA---AWFSAVPWGTMAVSGYMAGKASDSLIKA 266 (339)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~---~~~~~~~~~~~~~~~~~~g~l~d~~~~~ 266 (339)
++|..+.+++...++..........--..+++.+-.+.+.. +.+....++..++..++.+++.+|+|-+
T Consensus 262 ~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~ 333 (472)
T TIGR00769 262 SSPYILDLALLVIAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWL 333 (472)
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 99988887777777766655555444444555443222222 3333444455556666668888888764
No 198
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.06 E-value=2.2e-09 Score=108.64 Aligned_cols=144 Identities=15% Similarity=0.105 Sum_probs=117.3
Q ss_pred hHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhh------------------hh
Q 019567 8 LAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWA------------------AT 69 (339)
Q Consensus 8 i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~------------------~~ 69 (339)
+++.+|.++.+.|++.+.+.++..+++++.|+++||.++++.+..+.++.+++.+..++. ..
T Consensus 252 ~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 331 (1140)
T PRK06814 252 AKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSK 331 (1140)
T ss_pred HHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhcc
Confidence 445689999999999999999999999999999999888777766666666555544221 11
Q ss_pred cchhHHHHHHHHHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhh-hccchHHHHHHHHHH
Q 019567 70 HSTASLLAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLS-TIGISGPFILFSSLG 148 (339)
Q Consensus 70 ~~~~~~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~-~~~w~~~f~~~~~~~ 148 (339)
++.+.+++..++.|++.+...+...+++.+..|+++||+++|..+....+|..+++++.+.+.+ ..+....+++.+...
T Consensus 332 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~ 411 (1140)
T PRK06814 332 RHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWIILFIALAN 411 (1140)
T ss_pred cccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHH
Confidence 6777888899999999999999999999999999999999999999999999999999988874 456676666655544
Q ss_pred HHH
Q 019567 149 LLW 151 (339)
Q Consensus 149 ~~~ 151 (339)
++.
T Consensus 412 ~~~ 414 (1140)
T PRK06814 412 LIV 414 (1140)
T ss_pred HHH
Confidence 443
No 199
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.06 E-value=8e-09 Score=91.81 Aligned_cols=134 Identities=21% Similarity=0.328 Sum_probs=101.6
Q ss_pred hHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhh---hcchhHHHHHHHHHHh
Q 019567 8 LAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAA---THSTASLLAVRAFFGL 84 (339)
Q Consensus 8 i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~r~l~G~ 84 (339)
+++++|.++.+.+++.+...++..++.++.|++.||+|+|+.+..+..+..++.++..+.. .++...++...++.|+
T Consensus 233 ~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 312 (385)
T TIGR00710 233 YIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGI 312 (385)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHH
Confidence 4568999999999999999999999999999999999999999988888777766653211 1234455666788899
Q ss_pred hhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHH-HHHHHHhHHHHhhhhccchHHHHH
Q 019567 85 AEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHL-GNVVGLLLTPIMLSTIGISGPFIL 143 (339)
Q Consensus 85 g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~l~~~l~~~~~w~~~f~~ 143 (339)
+.+...+.......|..| ++|+++.++.+..... |...++. .+.+.+..+|...+..
T Consensus 313 ~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~-~~~~~~~~~~~~~~~~ 370 (385)
T TIGR00710 313 GNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYL-VSLIHGNTAWPMSLSC 370 (385)
T ss_pred HHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHH-HHhccccChHHHHHHH
Confidence 999888888888888876 6799999998877655 5555554 4455554445444443
No 200
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.06 E-value=2.7e-09 Score=86.84 Aligned_cols=149 Identities=18% Similarity=0.105 Sum_probs=114.9
Q ss_pred hhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHH-HHHHHHHHhhhhhcchhHHHHHHHHHHhh
Q 019567 7 PLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVAL-WSLSTLLTPWAATHSTASLLAVRAFFGLA 85 (339)
Q Consensus 7 ~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~r~l~G~g 85 (339)
..++.||+|+...+.+.+....-.++.+++.|.++||+|++...+.+..+ +.++..+. .-+++.-+++..+.|+.
T Consensus 290 fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l----~Ft~lsPy~~m~~lGLs 365 (459)
T KOG4686|consen 290 FFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGL----FFTFLSPYTSMTFLGLS 365 (459)
T ss_pred HHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhH----HhhhccHHHHHHHHhhh
Confidence 46889999999999999988888899999999999999999776655444 44444443 23556667888899998
Q ss_pred hhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhcc---chHHHHHHHHHHHHHHHHHHhhc
Q 019567 86 EGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIG---ISGPFILFSSLGLLWLSTWTSKV 159 (339)
Q Consensus 86 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~---w~~~f~~~~~~~~~~~~~~~~~~ 159 (339)
....-......++...|+++.|++.|..+...++|..+.|.+++.+.+.-| |--.|.+......+..+...+..
T Consensus 366 ysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~~~ 442 (459)
T KOG4686|consen 366 YSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILFYL 442 (459)
T ss_pred HHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHhhe
Confidence 877666678888889999999999999999999999999999999987543 65555554444333344333343
No 201
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=99.05 E-value=8.1e-09 Score=88.35 Aligned_cols=145 Identities=39% Similarity=0.611 Sum_probs=118.0
Q ss_pred chhhhHhHhCCCc--cchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcc--hhHHHHHH
Q 019567 4 AVVPLAAKFGWSS--SFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHS--TASLLAVR 79 (339)
Q Consensus 4 ~~~~i~~~~~~s~--~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~r 79 (339)
..+.+.++++.+. .+.++..+.+.++..++.++.|.+.||+|||+.+..+......+.+.+ ....+ .+.+++.|
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 101 (338)
T COG0477 24 ALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLL--ALAPNVGLALLLILR 101 (338)
T ss_pred HHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHH--HhCccchHHHHHHHH
Confidence 4556667776666 478999999999999999999999999999988888887656666666 33444 89999999
Q ss_pred HHHHhhhhcchhhhHHHHhhhCCc-chhhHHHHHHHH-HHHHHHHHHHhHHHHhhhh--ccchHHHHHHHHHHHH
Q 019567 80 AFFGLAEGVAMPAMSTLTSRWFPS-HERASAIGICMG-GFHLGNVVGLLLTPIMLST--IGISGPFILFSSLGLL 150 (339)
Q Consensus 80 ~l~G~g~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~-~~~~g~~~~~~l~~~l~~~--~~w~~~f~~~~~~~~~ 150 (339)
+.+|++.+...+...+++.|++|+ ++|+...+.... ...+|..+++.+++.+... .+||..|.........
T Consensus 102 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (338)
T COG0477 102 LLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLGLL 176 (338)
T ss_pred HHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 999999999999999999999987 688999998888 5888889998777766654 6799977766655543
No 202
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.05 E-value=3.7e-09 Score=97.28 Aligned_cols=127 Identities=24% Similarity=0.241 Sum_probs=110.0
Q ss_pred hhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhh-hhcchhHHHHHHHHHHhh
Q 019567 7 PLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWA-ATHSTASLLAVRAFFGLA 85 (339)
Q Consensus 7 ~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~r~l~G~g 85 (339)
.+++.+|.|+.+.|.....+.++..++.++.|++.||+|+|+.+..+.++..++.++.... ..++.+......++.|+|
T Consensus 285 ~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g 364 (495)
T PRK14995 285 ELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFS 364 (495)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHh
Confidence 3456689999999999999999999999999999999999999999988887777655321 124556667788999999
Q ss_pred hhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhh
Q 019567 86 EGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLS 133 (339)
Q Consensus 86 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~ 133 (339)
.+...+.....+.+..|+++++.+.+..+...++|..+|+.+.+.+.+
T Consensus 365 ~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 365 AASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999989899999999999999999999999999999999999988865
No 203
>PRK10133 L-fucose transporter; Provisional
Probab=99.05 E-value=6.5e-09 Score=93.99 Aligned_cols=140 Identities=11% Similarity=0.081 Sum_probs=112.0
Q ss_pred HhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHhhhhc
Q 019567 9 AAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGV 88 (339)
Q Consensus 9 ~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~~~ 88 (339)
++++|.|+.+.++....+.++..++.++.+++.||+|+|+++..+.++.+++..+. ...++. .-+..-.+.|++.+.
T Consensus 287 ~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~--~~~~~~-~~~~~~~l~glg~~~ 363 (438)
T PRK10133 287 EEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLIS--AFAGGH-VGLIALTLCSAFMSI 363 (438)
T ss_pred hhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH--HHcCCh-HHHHHHHHHHHHHHH
Confidence 45689999999999999999999999999999999999999998887777666555 334443 234567789999999
Q ss_pred chhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhcc-chHHHHHHHHHHHHHHH
Q 019567 89 AMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIG-ISGPFILFSSLGLLWLS 153 (339)
Q Consensus 89 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~-w~~~f~~~~~~~~~~~~ 153 (339)
.+|...+...|..| ++.+.+.++... ..+|..++|++.+.+.+..| -|..|++..+..+....
T Consensus 364 i~P~~~s~a~~~~~-~~~~~as~l~~~-~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~~~ 427 (438)
T PRK10133 364 QYPTIFSLGIKNLG-QDTKYGSSFIVM-TIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFI 427 (438)
T ss_pred HHHHHHHHHHcccc-hhhccchhHHhH-HhccchHHHHHHHHHHHhccchHHHHHHHHHHHHHHHH
Confidence 99999999999886 456777777764 44788889999999999887 78888875554444333
No 204
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.04 E-value=5.2e-09 Score=95.29 Aligned_cols=127 Identities=17% Similarity=0.185 Sum_probs=111.4
Q ss_pred hHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhh--------hcchhHHHHHHHH
Q 019567 10 AKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAA--------THSTASLLAVRAF 81 (339)
Q Consensus 10 ~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~r~l 81 (339)
+++|.++.+.|.......++..++....+++.+|++.|+++.++.++.+++.....+.. .++.+..+..-++
T Consensus 281 ~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l 360 (468)
T TIGR00788 281 QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSII 360 (468)
T ss_pred ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHH
Confidence 57899999999999999999999999999999999999999999999988875542110 1344556677889
Q ss_pred HHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhcc
Q 019567 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIG 136 (339)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~ 136 (339)
.+++.+..+.+...++.+..|+++++...++.+...++|..+++.+++.+.+..|
T Consensus 361 ~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 361 AEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred HHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999999999988776
No 205
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.04 E-value=3.9e-09 Score=90.77 Aligned_cols=151 Identities=23% Similarity=0.226 Sum_probs=118.4
Q ss_pred hhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhh-----cchhHHHHHHHH
Q 019567 7 PLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAAT-----HSTASLLAVRAF 81 (339)
Q Consensus 7 ~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~r~l 81 (339)
.++++|+.++.+.|...+.+.+...+..+.+|+++||+|.+|++......++++..+.++... .+....+..-+.
T Consensus 244 ~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~ 323 (417)
T COG2223 244 YLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLA 323 (417)
T ss_pred HHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHH
Confidence 367789999999999999999999999999999999999999999999888888887744211 334444443444
Q ss_pred HHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhcc-chHHHHHHHHHHHHHHHHHHhh
Q 019567 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIG-ISGPFILFSSLGLLWLSTWTSK 158 (339)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~-w~~~f~~~~~~~~~~~~~~~~~ 158 (339)
.++..|.-......++...+| ++-|.+.|+..+..++|...-|..-+...+..| +...|++.....++..+..+..
T Consensus 324 l~~~~G~GnGsvfk~Ip~if~-~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~ 400 (417)
T COG2223 324 LFVFAGLGNGSVFKMIPVIFP-KETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWAL 400 (417)
T ss_pred HHHHhccCcchheeechHHHH-hhhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444444466777778885 688999999999999999888888888877776 8999999888887777655544
No 206
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.01 E-value=3.5e-09 Score=93.22 Aligned_cols=114 Identities=15% Similarity=0.124 Sum_probs=94.3
Q ss_pred hhhhHhHhCCCccchhHHHHHHH-HHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhh--h-------cchhH
Q 019567 5 VVPLAAKFGWSSSFLGIVQSSFL-WGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAA--T-------HSTAS 74 (339)
Q Consensus 5 ~~~i~~~~~~s~~~~g~~~s~~~-~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~--~-------~~~~~ 74 (339)
.|...+|+|.++++.+.+.+... ++..++.+++|++.||+|||+.+..+.++..++.....+.. . ++.+.
T Consensus 232 ~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (356)
T TIGR00901 232 TTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHLLM 311 (356)
T ss_pred HHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHH
Confidence 45555679999999998888766 57789999999999999999999988888877766542210 1 34577
Q ss_pred HHHHHHHHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHH
Q 019567 75 LLAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFH 118 (339)
Q Consensus 75 ~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ 118 (339)
+..+.++.+++.+...+...+++.|.+|+|+||+.+|+.+...+
T Consensus 312 ~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 312 LFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 78889999999999999999999999999999999999877654
No 207
>PRK11043 putative transporter; Provisional
Probab=99.01 E-value=1.8e-08 Score=90.19 Aligned_cols=134 Identities=19% Similarity=0.237 Sum_probs=102.7
Q ss_pred hhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhh-h--hhcchhHHHHHHHH
Q 019567 5 VVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPW-A--ATHSTASLLAVRAF 81 (339)
Q Consensus 5 ~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~r~l 81 (339)
.|.+.+++|.++.+.++....+.++..++.+..+++.||+|+|+..........++.+.... . ..++.+..++...+
T Consensus 226 ~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (401)
T PRK11043 226 SPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCV 305 (401)
T ss_pred hHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHH
Confidence 46667789999999999888888899999999999999999998776665555444433211 1 13455556666778
Q ss_pred HHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchH
Q 019567 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISG 139 (339)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~ 139 (339)
.|++.+...+.......|..| ++|+++.++.+.....+...++.+.+.+.+...-..
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~ 362 (401)
T PRK11043 306 MAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALISTPLLTT 362 (401)
T ss_pred HHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccCCChhHH
Confidence 889888888888888878775 689999999999888888888888888876433333
No 208
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.98 E-value=9.8e-09 Score=93.90 Aligned_cols=123 Identities=11% Similarity=0.049 Sum_probs=97.6
Q ss_pred CccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhh---hhhcchhHHHHHHHHHHhhhhcchh
Q 019567 15 SSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPW---AATHSTASLLAVRAFFGLAEGVAMP 91 (339)
Q Consensus 15 s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~r~l~G~g~~~~~~ 91 (339)
+++..+++.+...++..++.++.++++||+|+|+.+..+..+..++.+...+ ...++.+.+++.-++.|++.+...+
T Consensus 264 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~ 343 (473)
T PRK10429 264 DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWV 343 (473)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHH
Confidence 4555677777777888999999999999999999999888776666555421 1135567777888899999999999
Q ss_pred hhHHHHhhhCC-------cchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccc
Q 019567 92 AMSTLTSRWFP-------SHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGI 137 (339)
Q Consensus 92 ~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w 137 (339)
...++++|..| +++.|..++.......+|..+++.+.+++.+..|+
T Consensus 344 ~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 344 LQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999865 23346688999999999999999999998876554
No 209
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.96 E-value=1.4e-08 Score=92.83 Aligned_cols=149 Identities=13% Similarity=0.034 Sum_probs=101.2
Q ss_pred hHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHH--------HHHHHHHHHHHHHHhhhh-hcchhHHHHH
Q 019567 8 LAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVL--------AWGVALWSLSTLLTPWAA-THSTASLLAV 78 (339)
Q Consensus 8 i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l--------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 78 (339)
+++++|.+..+.++..+...++..++.++.|+++||+++|+.. ..+......+........ ..+....++.
T Consensus 288 l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (465)
T TIGR00894 288 ISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIII 367 (465)
T ss_pred HHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHH
Confidence 4567899999999999999999999999999999998755321 111111111111110011 2344444445
Q ss_pred HHHHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhc---cchHHHHHHHHHHHHHHHHH
Q 019567 79 RAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTI---GISGPFILFSSLGLLWLSTW 155 (339)
Q Consensus 79 r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~---~w~~~f~~~~~~~~~~~~~~ 155 (339)
-.+.+.+.+...+.......|..| +.+|...++.+....+|..++|.+.+.+.+.. +|+..|.+.++..++..+..
T Consensus 368 ~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~ 446 (465)
T TIGR00894 368 LTLANAVSSGPLAGVLINSLDLAP-RFLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFY 446 (465)
T ss_pred HHHHHHHhhhhhhhhhhchhhcCh-hHHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHe
Confidence 555555555555555555566665 58999999999999999999999999887643 48889999887777765554
Q ss_pred Hh
Q 019567 156 TS 157 (339)
Q Consensus 156 ~~ 157 (339)
..
T Consensus 447 ~~ 448 (465)
T TIGR00894 447 LI 448 (465)
T ss_pred ee
Confidence 43
No 210
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.92 E-value=4.8e-08 Score=86.22 Aligned_cols=144 Identities=13% Similarity=0.030 Sum_probs=97.7
Q ss_pred hhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcch---HHHHH-HHHHHHHHHHHHhhhhhcchhHHHHHHH
Q 019567 5 VVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGK---KVLAW-GVALWSLSTLLTPWAATHSTASLLAVRA 80 (339)
Q Consensus 5 ~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r---~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 80 (339)
+|.+-++.|.|.. .+...+...+...++ .++++||.+|| +.... ..++.++..... ...++....++.-.
T Consensus 215 lp~~L~~~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~--~~~~~~~~~~~~~~ 288 (368)
T TIGR00903 215 LEAALRPAGLEDI-AGDAVALAILAGLIG---VAVIPDRVARAGLRSIYIRAAALLIAAFFLAL--AFELNRLALFAFIG 288 (368)
T ss_pred HHHHHHHCCCChH-HHHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHH--HHccccHHHHHHHH
Confidence 4666677777754 555555555544444 46777777543 33332 333334433333 22444444455556
Q ss_pred HHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHH
Q 019567 81 FFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWT 156 (339)
Q Consensus 81 l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~ 156 (339)
+.|++.....+...++.+|.+|++.|+++.|+.+....+|...+|++.+.+.. +-+..|.+.++..++..+...
T Consensus 289 l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 289 IAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAIAL 362 (368)
T ss_pred HHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHH
Confidence 67777777777788999999999999999999999999999999998877763 667778888777777655543
No 211
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.92 E-value=7.6e-08 Score=85.40 Aligned_cols=122 Identities=18% Similarity=0.152 Sum_probs=87.1
Q ss_pred hhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhh-h-hhcchhHHHHHHHHHHh
Q 019567 7 PLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPW-A-ATHSTASLLAVRAFFGL 84 (339)
Q Consensus 7 ~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~r~l~G~ 84 (339)
...+++|.++.+.++..+...++..++.++.|++.||+|||+.+..+..+..+..+.... . ...+.+...++-.+.+.
T Consensus 220 ~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (377)
T PRK11102 220 VYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVG 299 (377)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 345668999999999999999999999999999999999999999887765443332211 1 12345555555555555
Q ss_pred hhhcchhhhHHHHhhhCCcchhhHHHHHHHHH-HHHHHHHHHhHHH
Q 019567 85 AEGVAMPAMSTLTSRWFPSHERASAIGICMGG-FHLGNVVGLLLTP 129 (339)
Q Consensus 85 g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~-~~~g~~~~~~l~~ 129 (339)
+.+...+.....+.|..| ++++++.+..+.. ..+|..+++.++.
T Consensus 300 ~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~~~ 344 (377)
T PRK11102 300 CVSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALLSL 344 (377)
T ss_pred HHHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 556666666777788776 7899998886554 4566666666543
No 212
>PRK09669 putative symporter YagG; Provisional
Probab=98.92 E-value=2e-08 Score=91.14 Aligned_cols=120 Identities=11% Similarity=0.215 Sum_probs=94.2
Q ss_pred chhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHhhhhcchhhhHHHH
Q 019567 18 FLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGVAMPAMSTLT 97 (339)
Q Consensus 18 ~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~~~~~~~~~~~i 97 (339)
..+.+.....+...++.+++++++||+|+|+.+..+.++..+......+...++.+.+++..++.|++.+...+...+++
T Consensus 265 ~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ 344 (444)
T PRK09669 265 LATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMF 344 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455566677778889999999999999999998877666544433112245777788888999999999999999999
Q ss_pred hhhCCc-------chhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccc
Q 019567 98 SRWFPS-------HERASAIGICMGGFHLGNVVGLLLTPIMLSTIGI 137 (339)
Q Consensus 98 ~~~~~~-------~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w 137 (339)
+|..|. ++.|...+..+....+|..+++.+++.+.+..|+
T Consensus 345 ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 345 SDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 988752 2346678899999999999999999998887665
No 213
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.91 E-value=8e-08 Score=86.15 Aligned_cols=137 Identities=16% Similarity=0.097 Sum_probs=98.2
Q ss_pred HHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhh----cchhHHHHHHHHHHhhhhcchhhhHHHHh
Q 019567 23 QSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAAT----HSTASLLAVRAFFGLAEGVAMPAMSTLTS 98 (339)
Q Consensus 23 ~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~r~l~G~g~~~~~~~~~~~i~ 98 (339)
.....+...+..+++|+++||+|+|+++.++.+...+......+... .+++.+.+.-+...++.|........++.
T Consensus 292 ~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip 371 (462)
T PRK15034 292 AFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIA 371 (462)
T ss_pred HHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhH
Confidence 33446677888999999999999999999998877776643211211 34666666655555555655667777777
Q ss_pred hhCCc---------------------chhhHHHHHHHHHHHHHHHHHHhHHHHhhhhc-cchHHHHHHHHHHHHHHHHHH
Q 019567 99 RWFPS---------------------HERASAIGICMGGFHLGNVVGLLLTPIMLSTI-GISGPFILFSSLGLLWLSTWT 156 (339)
Q Consensus 99 ~~~~~---------------------~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~-~w~~~f~~~~~~~~~~~~~~~ 156 (339)
+.+|+ ++-|.+.|+.++...+|..+-|.+-+...+.. ++...|+...+..+++.++.+
T Consensus 372 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w 451 (462)
T PRK15034 372 VIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTW 451 (462)
T ss_pred HHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHH
Confidence 77763 25678889999999999999997766666654 488888888877777766665
Q ss_pred hhc
Q 019567 157 SKV 159 (339)
Q Consensus 157 ~~~ 159 (339)
...
T Consensus 452 ~~y 454 (462)
T PRK15034 452 LVY 454 (462)
T ss_pred HHh
Confidence 554
No 214
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.91 E-value=7.9e-08 Score=81.28 Aligned_cols=152 Identities=17% Similarity=0.130 Sum_probs=123.4
Q ss_pred hhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhh-cchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHH
Q 019567 5 VVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKY-GGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFG 83 (339)
Q Consensus 5 ~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~-G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G 83 (339)
+|.+..|-|+|+.+.|++.+...+.....++....+++|. ++|+..+...+++.++.+.+.+ .+.-..++. -++.|
T Consensus 231 LP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~--~P~~~~~lw-~~llG 307 (395)
T COG2807 231 LPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLL--APGQLPILW-ALLLG 307 (395)
T ss_pred HHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHH--hhhhHHHHH-HHHHh
Confidence 6889999999999999999999999999999999999965 6778888888888888887733 444333333 49999
Q ss_pred hhhhcchhhhHHHHhhhCCc-chhhHHHHHHHHHHHHHHHHHHhHHHHhhhhc-cchHHHHHHHHHHHHHHHHHHhhc
Q 019567 84 LAEGVAMPAMSTLTSRWFPS-HERASAIGICMGGFHLGNVVGLLLTPIMLSTI-GISGPFILFSSLGLLWLSTWTSKV 159 (339)
Q Consensus 84 ~g~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~-~w~~~f~~~~~~~~~~~~~~~~~~ 159 (339)
+|.|..++.+...+.+..++ ++-++..++.+....+=...||.+.|++.|.. +|+..+...+...+...+..+..-
T Consensus 308 ~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~a~ 385 (395)
T COG2807 308 LGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFGLRAG 385 (395)
T ss_pred CccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHHhhcc
Confidence 99999999999999998854 44566667777777777889999999998865 599999988887777666655543
No 215
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.91 E-value=1.2e-08 Score=89.42 Aligned_cols=121 Identities=24% Similarity=0.343 Sum_probs=104.0
Q ss_pred hhhh-HhHhCCC-ccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhh-hhcchhHHHHHHHH
Q 019567 5 VVPL-AAKFGWS-SSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWA-ATHSTASLLAVRAF 81 (339)
Q Consensus 5 ~~~i-~~~~~~s-~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~r~l 81 (339)
.|.. .+++|.+ ..+.+...+...+...++.++.|++.||+++|+..........+..+...+. ..++....+..-++
T Consensus 229 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (352)
T PF07690_consen 229 LPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPVWLIIALFL 308 (352)
T ss_dssp HHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHH
T ss_pred cchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 4553 8889999 7899999999999999999999999999999888888777777766665321 22355777778899
Q ss_pred HHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHH
Q 019567 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGL 125 (339)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~ 125 (339)
.|++.+...+....++.|..|+++|+++.|+.+...++|..++|
T Consensus 309 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 309 IGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 99999999999999999999999999999999999999999987
No 216
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.91 E-value=6.7e-09 Score=91.74 Aligned_cols=147 Identities=21% Similarity=0.249 Sum_probs=128.9
Q ss_pred hHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHhhhhcc
Q 019567 10 AKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGVA 89 (339)
Q Consensus 10 ~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~~~~ 89 (339)
||.+..+...|.....-..+-.+.=++.+++.+|+|+-+++..++.+..+=.+.. ...+|.|+.+...+++|+..+..
T Consensus 399 ed~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~--S~L~n~W~vLPieilqgit~ali 476 (618)
T KOG3762|consen 399 EDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYY--SYLQNPWMVLPIEILQGITHALI 476 (618)
T ss_pred hhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHH--HHhcCchheeeHHHHHHHHHHHH
Confidence 5667677777777777777888888899999999999999999999998887777 55899999999999999999999
Q ss_pred hhhhHHHHhhhCCcchhhHHHHHHH-HHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhh
Q 019567 90 MPAMSTLTSRWFPSHERASAIGICM-GGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSK 158 (339)
Q Consensus 90 ~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~ 158 (339)
+.+..+++++..||+.|..+.++.+ ...++|--+|+++++.+.+.++=|..|...++.+++.++.....
T Consensus 477 Waa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~i 546 (618)
T KOG3762|consen 477 WAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFISI 546 (618)
T ss_pred HHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999998875 45678999999999999999999999999998888876665544
No 217
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.91 E-value=4.9e-08 Score=89.19 Aligned_cols=142 Identities=17% Similarity=0.126 Sum_probs=115.3
Q ss_pred hhHHHHHHHHHHHHHHhhhHHHhhhhcc-----hHHH--HHHHHHHHHHHHHHhhh-------hhcchhHHHHHHHHHHh
Q 019567 19 LGIVQSSFLWGYIFSSVIGGALVDKYGG-----KKVL--AWGVALWSLSTLLTPWA-------ATHSTASLLAVRAFFGL 84 (339)
Q Consensus 19 ~g~~~s~~~~~~~i~~~~~g~l~dr~G~-----r~~l--~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~r~l~G~ 84 (339)
.+++.+...+...+.+++..++-.|.+| +... .+|.++.+++.+..++. ...|+++++...++.++
T Consensus 314 ~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ 393 (475)
T TIGR00924 314 VIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTL 393 (475)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHH
Confidence 6789999999999998886654444433 3433 67888888877766321 14689999999999999
Q ss_pred hhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhcc
Q 019567 85 AEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVT 160 (339)
Q Consensus 85 g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~ 160 (339)
|+....|...+++.|..|++.||+++|++.....+|..+++.+.....+..+|...|...++..++..++.++..|
T Consensus 394 ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (475)
T TIGR00924 394 GELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMVP 469 (475)
T ss_pred HHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999888777778999998888887777666655443
No 218
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.88 E-value=8.7e-08 Score=77.54 Aligned_cols=300 Identities=13% Similarity=0.089 Sum_probs=160.6
Q ss_pred hhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHhhh
Q 019567 7 PLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAE 86 (339)
Q Consensus 7 ~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~ 86 (339)
.+-++++....|+|.+.-.......+...+.|.++||-|||+.-+.-++...++++- -.++.+-.++++|.+-|+..
T Consensus 62 yLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCiT---KhSpqYkVLmVGR~LGGiaT 138 (454)
T KOG4332|consen 62 YLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCIT---KHSPQYKVLMVGRVLGGIAT 138 (454)
T ss_pred eeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHHh---hcCCceEEEeehhhhhhHHH
Confidence 445677888888888888777778888999999999999999666555555554443 24789999999999999999
Q ss_pred hcchhhhHHH-HhhhCCcchhhHHHHHH--------HHHHHHHHHHHHhHHHHhhhhcc--chHHHHHHHHHHHHHHHHH
Q 019567 87 GVAMPAMSTL-TSRWFPSHERASAIGIC--------MGGFHLGNVVGLLLTPIMLSTIG--ISGPFILFSSLGLLWLSTW 155 (339)
Q Consensus 87 ~~~~~~~~~~-i~~~~~~~~r~~~~~~~--------~~~~~~g~~~~~~l~~~l~~~~~--w~~~f~~~~~~~~~~~~~~ 155 (339)
+..+..-.++ +.|.- ++|+.-.-+. ..++.+=.+++.+.+..+.++++ --.+|-..+....+...+.
T Consensus 139 sLLFSaFEsWliaEHn--ekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaigmAvi 216 (454)
T KOG4332|consen 139 SLLFSAFESWLIAEHN--EKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIGMAVI 216 (454)
T ss_pred HHHHHHHHHHHHHHhh--hccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHHHH
Confidence 9988887766 45554 2333222221 13334444555555666666543 4455655444433333322
Q ss_pred HhhccCCCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHH-HhhhhhhhhhhCCc
Q 019567 156 TSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLL-SWMPIYFNTVFNVN 234 (339)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~g~~ 234 (339)
..--.|+-.+.. ++++.. ..-....+.+..++++.++.....+.-...+.+. .|.|..--+..+
T Consensus 217 l~~W~ENygdps----~~kdll---------tqf~gaa~aiaSD~ki~LLG~iqsLFE~smytFVFLWTPaLspn~e~-- 281 (454)
T KOG4332|consen 217 LSSWSENYGDPS----ENKDLL---------TQFKGAARAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEE-- 281 (454)
T ss_pred HhhhhhccCChh----hhHHHH---------HHhhHhHHHHhcchHHHHHHHHHHHHhhhhheeeeeecccCCCCccc--
Confidence 211122211110 000000 0011123455666666666555555555544443 344432211111
Q ss_pred cchhhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhc----cc---chhHHHHHHHH
Q 019567 235 LKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNY----AK---SPAVAAVLITI 307 (339)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~~ 307 (339)
.--|.+++.+..+.++|+-+..++..|-..+ .. ..+.+.++..+..+.+... .+ +.....+.++.
T Consensus 282 -iPhGfiFatFMlASmLGSSla~Rl~s~s~~~---ve----~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~ 353 (454)
T KOG4332|consen 282 -IPHGFIFATFMLASMLGSSLASRLLSRSSPK---VE----SYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCL 353 (454)
T ss_pred -CCchhHHHHHHHHHHHhhHHHHHHHhcCCcc---cc----hHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHH
Confidence 2236666666666666665555554432221 11 1222223332222222211 12 23344555666
Q ss_pred HHHHhhhcccchhhhhh-hcc-cchhhhh
Q 019567 308 ALSLSSFSQAGYLLNIQ-IAQ-DFSTALQ 334 (339)
Q Consensus 308 ~~~~~~~~~~~~~~~~~-~~p-~~~g~~~ 334 (339)
.-.+.+..++...-.-. ..| +.+.+++
T Consensus 354 ~E~cvGlfwPSimkmRsqyIPEearstim 382 (454)
T KOG4332|consen 354 FEACVGLFWPSIMKMRSQYIPEEARSTIM 382 (454)
T ss_pred HHHHHhhcchHHHHHHHhhCCHHHHhhhh
Confidence 66677777777666555 444 4455443
No 219
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.84 E-value=1.4e-08 Score=85.78 Aligned_cols=128 Identities=17% Similarity=0.235 Sum_probs=95.2
Q ss_pred HHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhCCcchh
Q 019567 27 LWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGVAMPAMSTLTSRWFPSHER 106 (339)
Q Consensus 27 ~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r 106 (339)
.+.-.-|.++.+.+.||+|||+++....+++++..+.. ..+.+-....+.-+..-+.....+.+.+.|..|.+|.+.|
T Consensus 391 slaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll--~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavR 468 (528)
T KOG0253|consen 391 SLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLL--TTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVR 468 (528)
T ss_pred HHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHH--HHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhh
Confidence 34556788999999999999999999999999988887 3343333223333333333445566788999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhh
Q 019567 107 ASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSK 158 (339)
Q Consensus 107 ~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~ 158 (339)
+...|..+...-+|.++.|+++ +.....-..+..+.+..+++..+...++
T Consensus 469 atgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcff 518 (528)
T KOG0253|consen 469 ATGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFF 518 (528)
T ss_pred hcchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheee
Confidence 9999999999999999999998 4333444556666677776666655544
No 220
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.82 E-value=1.6e-06 Score=77.13 Aligned_cols=105 Identities=14% Similarity=0.088 Sum_probs=92.1
Q ss_pred HHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhCC
Q 019567 23 QSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGVAMPAMSTLTSRWFP 102 (339)
Q Consensus 23 ~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~~~~~~~~~~~i~~~~~ 102 (339)
+++......++.++.+.+.|+.|.|+.+.++..+...-.... . -+|-+.+++...+.|+|.+..+..-..+++|..+
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gf--l-~~N~y~~yfssallG~Gaallw~GqG~ylt~~st 132 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGF--L-FPNSYYLYFSSALLGFGAALLWTGQGGYLTSNST 132 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHH--H-hcchHHHHHHHHHhhhhHHheecccceehhhcCC
Confidence 677778889999999999999999999999999998877765 3 4788889999999999999999999999999999
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhHHHH
Q 019567 103 SHERASAIGICMGGFHLGNVVGLLLTPI 130 (339)
Q Consensus 103 ~~~r~~~~~~~~~~~~~g~~~~~~l~~~ 130 (339)
++.+.+..++.-+....+.++|...-..
T Consensus 133 ~~tie~Nisi~Wai~~~~li~Ggi~l~~ 160 (461)
T KOG3098|consen 133 RETIERNISIFWAIGQSSLIIGGIILFI 160 (461)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhHhhee
Confidence 9999999999888888877777655433
No 221
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.80 E-value=1.7e-07 Score=84.75 Aligned_cols=131 Identities=18% Similarity=0.196 Sum_probs=109.8
Q ss_pred hhhHhH-hCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHh
Q 019567 6 VPLAAK-FGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGL 84 (339)
Q Consensus 6 ~~i~~~-~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~ 84 (339)
+...++ ++ ++...+.+.....++..++.+++++++||+|+|+++..+..+..++.++..+...+|.+.+++.-++.|+
T Consensus 249 ~y~~~~vl~-~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi 327 (428)
T PF13347_consen 249 PYYFTYVLG-NEGLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGI 327 (428)
T ss_pred HHHHHHHhc-CchhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHh
Confidence 344444 44 3467788888999999999999999999999999999999999999988743222599999999999999
Q ss_pred hhhcchhhhHHHHhhhCCc-------chhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccc
Q 019567 85 AEGVAMPAMSTLTSRWFPS-------HERASAIGICMGGFHLGNVVGLLLTPIMLSTIGI 137 (339)
Q Consensus 85 g~~~~~~~~~~~i~~~~~~-------~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w 137 (339)
+.+..++...++++|..+. ++.|...+..+....+|..+++.+.+.+.+..|+
T Consensus 328 ~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~Gy 387 (428)
T PF13347_consen 328 GYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVGY 387 (428)
T ss_pred hhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhCc
Confidence 9999999999999998863 3358889999999999999999999888765543
No 222
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.79 E-value=1.2e-07 Score=87.23 Aligned_cols=139 Identities=12% Similarity=0.014 Sum_probs=104.8
Q ss_pred hhHHHHHHHHHHHHHHhhh----HHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcc---------hhHHHHHHHHHHhh
Q 019567 19 LGIVQSSFLWGYIFSSVIG----GALVDKYGGKKVLAWGVALWSLSTLLTPWAATHS---------TASLLAVRAFFGLA 85 (339)
Q Consensus 19 ~g~~~s~~~~~~~i~~~~~----g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~r~l~G~g 85 (339)
.++..+...+...+..++. +++.||++.++.+.+|.++.+++.+..++ .++ .++++..+++.|+|
T Consensus 318 ~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~--~~~~~~~~~~vs~~~~~~~~~l~~~g 395 (500)
T PRK09584 318 PEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPL--GAKFANDAGIVSVNWLIASYGLQSIG 395 (500)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHH--HHHhcCCCCccCHHHHHHHHHHHHHH
Confidence 5677777777777776666 66666666778889999999999888743 333 45788999999999
Q ss_pred hhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhh----------hccchHHHHHHHHHHHHHHHHH
Q 019567 86 EGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLS----------TIGISGPFILFSSLGLLWLSTW 155 (339)
Q Consensus 86 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~----------~~~w~~~f~~~~~~~~~~~~~~ 155 (339)
+....|...+++.+..|++.||+.+|.+.....+|..++..+...... ..+..+.|...++.+++..++.
T Consensus 396 e~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~ 475 (500)
T PRK09584 396 ELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLM 475 (500)
T ss_pred HHHHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999888777777777666643211 1135677887777766555444
Q ss_pred Hhhc
Q 019567 156 TSKV 159 (339)
Q Consensus 156 ~~~~ 159 (339)
+...
T Consensus 476 ~~~~ 479 (500)
T PRK09584 476 LLTA 479 (500)
T ss_pred HHHH
Confidence 4433
No 223
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.75 E-value=6.3e-07 Score=80.08 Aligned_cols=127 Identities=19% Similarity=0.201 Sum_probs=95.7
Q ss_pred hHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHH-HHHHHHhhhhhcchhHHHHHHHHHHhhh
Q 019567 8 LAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWS-LSTLLTPWAATHSTASLLAVRAFFGLAE 86 (339)
Q Consensus 8 i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~r~l~G~g~ 86 (339)
+++.+|.++.+.++.......+..+++++.+++.||++++........... +...........+.+.+....++.|++.
T Consensus 234 ~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 313 (394)
T PRK11652 234 MGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGA 313 (394)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHH
Confidence 344589999999999999999999999999999999984433322222222 1111111111245667788889999999
Q ss_pred hcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhc
Q 019567 87 GVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTI 135 (339)
Q Consensus 87 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~ 135 (339)
+...+...++..|.+| ++++...++.+....+|..+++.+++.+.+..
T Consensus 314 ~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~~ 361 (394)
T PRK11652 314 GMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQTG 361 (394)
T ss_pred HHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccCCc
Confidence 9999999999999886 67899999999999999999999998876653
No 224
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.73 E-value=4.2e-08 Score=65.34 Aligned_cols=73 Identities=26% Similarity=0.235 Sum_probs=66.6
Q ss_pred CCcchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHH
Q 019567 1 MSVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASL 75 (339)
Q Consensus 1 ~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (339)
+.|++|.+++|.++|.++.|++.+...+||.+|++...++.++..+++.+..+.+...+..+.+ +..++.+..
T Consensus 11 yTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~m--a~~~~~~~w 83 (85)
T PF06779_consen 11 YTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAM--ALTHSFWLW 83 (85)
T ss_pred HHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHH--HHHhchHHH
Confidence 4689999999999999999999999999999999999999999888999999999999999999 547776544
No 225
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.72 E-value=5.7e-07 Score=79.93 Aligned_cols=125 Identities=18% Similarity=0.204 Sum_probs=103.4
Q ss_pred hCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHhhhhcchh
Q 019567 12 FGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGVAMP 91 (339)
Q Consensus 12 ~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~~~~~~ 91 (339)
+|.++.+..+.......+..++.++..++++|+|+|+++..+.++..++.++.-+...++.+..++..++.++|.+...+
T Consensus 267 lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~ 346 (467)
T COG2211 267 LGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANP 346 (467)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhcccc
Confidence 34455566677778888888889999999999999999999999999999988443345788899999999999999999
Q ss_pred hhHHHHhhhCCc-------chhhHHHHHHHHHHHHHHHHHHhHHHHhhhhcc
Q 019567 92 AMSTLTSRWFPS-------HERASAIGICMGGFHLGNVVGLLLTPIMLSTIG 136 (339)
Q Consensus 92 ~~~~~i~~~~~~-------~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~ 136 (339)
.-.++++|..+- ++-|...+......-+|..++..+.+++.+..|
T Consensus 347 l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~G 398 (467)
T COG2211 347 LPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIG 398 (467)
T ss_pred ccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 999998886642 334778888889999999999988888876554
No 226
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=98.72 E-value=4.5e-07 Score=76.05 Aligned_cols=315 Identities=12% Similarity=0.032 Sum_probs=194.8
Q ss_pred HhCCCccchh-HHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHhhhhcc
Q 019567 11 KFGWSSSFLG-IVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGVA 89 (339)
Q Consensus 11 ~~~~s~~~~g-~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~~~~ 89 (339)
|.|+++.++. -+.-...-.+.+.-.+.=.+.|-.-.|++++.-.+.......+. .+.++.+.+-+.-+.-|...+ .
T Consensus 35 ~~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~l--v~g~sV~~mQvlE~FyG~~tA-a 111 (433)
T KOG3810|consen 35 DKNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIML--VFGPSVKAMQVLEFFYGPATA-A 111 (433)
T ss_pred CCCccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHH--HhcCCchheeeehhhcChHHH-H
Confidence 3455554432 22233344556666677789999988998887766666666666 558899988888999998866 4
Q ss_pred hhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccc--hHHHHHHHHHHHHHHHHHHhhccCCCCCCC
Q 019567 90 MPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGI--SGPFILFSSLGLLWLSTWTSKVTNDPCNSP 167 (339)
Q Consensus 90 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w--~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (339)
..+-++++=+..+++++.++.+...+..-.|-..|..++..+...-.+ ...=.+ ...+.........++|..++..-
T Consensus 112 EIAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~I-SL~~~~ia~~~A~fLP~v~rSl~ 190 (433)
T KOG3810|consen 112 EIAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYI-SLAEVTIAVLLALFLPRVKRSLY 190 (433)
T ss_pred HHhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchh-hHHHHHHHHHHHhhCCCCchhhh
Confidence 467788888888999999999999999999999999998888764322 222122 22222223333445555543211
Q ss_pred CCChHHHHHHHhCCc---cccc--------cCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhC-Ccc
Q 019567 168 FVSKSELRLIQAGKS---DSVK--------KRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFN-VNL 235 (339)
Q Consensus 168 ~~~~~~~~~~~~~~~---~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g-~~~ 235 (339)
...++++....+.++ +.+. .....++.+..+||+.....+.+.+...+++...++.-..-++... -..
T Consensus 191 f~~~~~~~~v~~~e~~~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~~~~~~ 270 (433)
T KOG3810|consen 191 FHRLEDKISVGDLEEMNPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVAPNPAN 270 (433)
T ss_pred hhcccccceeccchhcCccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhCCCchh
Confidence 111111100000000 0000 0111234556678888888888888888888888877666665421 111
Q ss_pred chhhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhcccchhHHHHHHHHHHHHhhhc
Q 019567 236 KQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFS 315 (339)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (339)
...|..=++..+.++++.+..|++.-++.|. +..++..+....+.++..+....+.|...+..++......+.
T Consensus 271 vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~-------g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~ 343 (433)
T KOG3810|consen 271 VYNGAVEAVSTLLGAIAALAAGYLNINWNRW-------GDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLT 343 (433)
T ss_pred hhcCHHHHHHHHHHHHHHHHHHheeeccchh-------hHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhh
Confidence 2234444556666788888888887665554 567777777777777777777777777766666655555554
Q ss_pred ccchhhhhh--hcccchhhhhhh
Q 019567 316 QAGYLLNIQ--IAQDFSTALQIQ 336 (339)
Q Consensus 316 ~~~~~~~~~--~~p~~~g~~~g~ 336 (339)
.+....... +..+..|.+.|+
T Consensus 344 itiA~~~iA~nL~~e~~gLvFGi 366 (433)
T KOG3810|consen 344 ITIATFQIARNLSSELFGLVFGI 366 (433)
T ss_pred hhHHHHHHHHhhhhhhheeeeeh
Confidence 444433333 666777777665
No 227
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=98.69 E-value=2.8e-07 Score=80.24 Aligned_cols=126 Identities=15% Similarity=0.194 Sum_probs=97.2
Q ss_pred chhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhh----hhcchHHHH-HHHHHHHHHHHHHhhhhhcch------
Q 019567 4 AVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVD----KYGGKKVLA-WGVALWSLSTLLTPWAATHST------ 72 (339)
Q Consensus 4 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~d----r~G~r~~l~-~~~~~~~~~~~~~~~~~~~~~------ 72 (339)
..|+..+++|++.+..+.+--.-.+...+.+|+.|..+| ||||||.++ .+.+..+++.++.++ +.++
T Consensus 54 y~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~--aaDig~~lgd 131 (498)
T KOG0637|consen 54 YLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGY--AADIGLLLGD 131 (498)
T ss_pred cccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhh--HhhhhHHhcC
Confidence 357778889999988888888778888899999999999 589877655 455666666666654 3322
Q ss_pred -----------hHHHHHHHHHHhhhhcchhhhHHHHhhhCCcchhhH-HHHHHHHHHHHHHHHHHhHHHHh
Q 019567 73 -----------ASLLAVRAFFGLAEGVAMPAMSTLTSRWFPSHERAS-AIGICMGGFHLGNVVGLLLTPIM 131 (339)
Q Consensus 73 -----------~~~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~-~~~~~~~~~~~g~~~~~~l~~~l 131 (339)
..++++--+.-++.-....++-+++.|...++++.+ +++.+..+..+|..+|..++++.
T Consensus 132 ~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 132 NERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSYL 202 (498)
T ss_pred CcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccccc
Confidence 344555556666777888899999999997666666 99999999999999999888743
No 228
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.67 E-value=3.9e-07 Score=83.44 Aligned_cols=141 Identities=16% Similarity=0.066 Sum_probs=107.7
Q ss_pred hhHHHHHHHHHHHHHHhhhHHHhhhhcchHH-------HHHHHHHHHHHHHHHh-----hhh---hcchhHHHHHHHHHH
Q 019567 19 LGIVQSSFLWGYIFSSVIGGALVDKYGGKKV-------LAWGVALWSLSTLLTP-----WAA---THSTASLLAVRAFFG 83 (339)
Q Consensus 19 ~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~-------l~~~~~~~~~~~~~~~-----~~~---~~~~~~~~~~r~l~G 83 (339)
.+++.+...+...+..++.+++.||+++|+. +.+|.++.+++.+... +.. ..+.++++..-++.|
T Consensus 311 ~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g 390 (489)
T PRK10207 311 PVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQS 390 (489)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHH
Confidence 4667777778888999999999999999973 7777777776654321 111 135677888999999
Q ss_pred hhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhh----------hccchHHHHHHHHHHHHHHH
Q 019567 84 LAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLS----------TIGISGPFILFSSLGLLWLS 153 (339)
Q Consensus 84 ~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~----------~~~w~~~f~~~~~~~~~~~~ 153 (339)
+|+++..+...+.+.+..|++.++.++|++.....+|..++..++..... .-...+.|...++.+++..+
T Consensus 391 ~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v 470 (489)
T PRK10207 391 LGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAV 470 (489)
T ss_pred HHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999888865521 11245667777777666655
Q ss_pred HHHhhc
Q 019567 154 TWTSKV 159 (339)
Q Consensus 154 ~~~~~~ 159 (339)
+.+...
T Consensus 471 ~~~~~~ 476 (489)
T PRK10207 471 VMALMV 476 (489)
T ss_pred HHHHHH
Confidence 555443
No 229
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.67 E-value=1.1e-05 Score=70.58 Aligned_cols=136 Identities=18% Similarity=0.197 Sum_probs=98.6
Q ss_pred hHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHhhhhcchhhhHHHHhh
Q 019567 20 GIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGVAMPAMSTLTSR 99 (339)
Q Consensus 20 g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~~~~~~~~~~~i~~ 99 (339)
+.+.-+-.+...+..+...+..+|+..+.=..+..+++.++.++. ++++|.+.-+++-.+.+++.|........+. .
T Consensus 62 ~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~v--a~~~~v~~~l~Gv~las~ssg~GE~tfL~lt-~ 138 (402)
T PF02487_consen 62 GAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLV--AFSPSVWVRLLGVVLASLSSGLGEVTFLSLT-H 138 (402)
T ss_pred hHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhhe--eeccchhHHHHHHHHHhhhhhhhHHHHHHHH-H
Confidence 334445555666777778889999876555566667788888888 6689999999999999999888777777764 4
Q ss_pred hCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccc--hHHHHHHHHHHHHHHHHHHhhccCCC
Q 019567 100 WFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGI--SGPFILFSSLGLLWLSTWTSKVTNDP 163 (339)
Q Consensus 100 ~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w--~~~f~~~~~~~~~~~~~~~~~~~~~~ 163 (339)
.+++ ...+.++.+.+.+.++|+..-..+.+ .++ |..+++...+.++..+..++.+|+++
T Consensus 139 ~y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~~~ 199 (402)
T PF02487_consen 139 FYGK----SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPSPP 199 (402)
T ss_pred hcCc----cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 5653 35778888888888888877666665 555 77888877777666665565655443
No 230
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.66 E-value=2e-07 Score=82.30 Aligned_cols=126 Identities=13% Similarity=-0.001 Sum_probs=88.0
Q ss_pred hHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHH
Q 019567 201 PSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSI 280 (339)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 280 (339)
+++...+..+......+....+.|.++++++|.|+.+.+++.+...++..++.++.|+++||+|+| +.+..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r---------~~~~~ 72 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPR---------YTTTL 72 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCch---------HHHHH
Confidence 456667777777778888889999878888999999999999999999999999999999999976 45566
Q ss_pred HhhhhhhHhhhhhccc-chhHHHHHHHHHHHHhhhcccchhhhhh--hcccchhhhhhh
Q 019567 281 GFIGPGVSLLCLNYAK-SPAVAAVLITIALSLSSFSQAGYLLNIQ--IAQDFSTALQIQ 336 (339)
Q Consensus 281 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~~g~~~g~ 336 (339)
+.++..++.++..+.+ +.+...+.-.+.....+. ......... ..+++++...+.
T Consensus 73 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~ 130 (366)
T TIGR00886 73 SLLLLAIPCLWAGLAVQSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGL 130 (366)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHH
Confidence 6777777766666665 554433332222222222 222223333 445678877664
No 231
>PRK11462 putative transporter; Provisional
Probab=98.65 E-value=9.6e-07 Score=80.46 Aligned_cols=122 Identities=15% Similarity=0.169 Sum_probs=83.8
Q ss_pred ccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHhhhhcchhhhHH
Q 019567 16 SSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGVAMPAMST 95 (339)
Q Consensus 16 ~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~~~~~~~~~~ 95 (339)
+...+.+.+.+.++..++.+++++++||+|+|+.+..+..+..+..++.-+...++...+++.-++.|++.+...+...+
T Consensus 262 ~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~ 341 (460)
T PRK11462 262 PEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWV 341 (460)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456677788888899999999999999999987765554444333331111222334455556678877776666677
Q ss_pred HHhhhCC-------cchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccc
Q 019567 96 LTSRWFP-------SHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGI 137 (339)
Q Consensus 96 ~i~~~~~-------~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w 137 (339)
+++|..+ +++.|..++.......+|..+++.+++.+.+..|+
T Consensus 342 m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 342 MMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 7777665 23345566777888999999999999888765454
No 232
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.63 E-value=1.7e-06 Score=65.64 Aligned_cols=109 Identities=15% Similarity=0.174 Sum_probs=92.6
Q ss_pred hHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHhhhhcchhhhHHHHhh
Q 019567 20 GIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGVAMPAMSTLTSR 99 (339)
Q Consensus 20 g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~~~~~~~~~~~i~~ 99 (339)
-.-.++......++.++.+.+.+++|.|+.++++.++..+-.... .-++.+.++.+-.+.|++.+..++.-..++.+
T Consensus 40 ~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~---~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~ 116 (156)
T PF05978_consen 40 YYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF---FYPNSYTLYPASALLGFGAALLWTAQGTYLTS 116 (156)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH---HhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHH
Confidence 344556666778888999999999999999999999998655543 35788999999999999999999999999999
Q ss_pred hCCcchhhHHHHHHHHHHHHHHHHHHhHHHHh
Q 019567 100 WFPSHERASAIGICMGGFHLGNVVGLLLTPIM 131 (339)
Q Consensus 100 ~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l 131 (339)
..++++|++..++.-.....+.++|......+
T Consensus 117 ~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 117 YSTEETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred cCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998888888888887766544
No 233
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.60 E-value=1.6e-06 Score=77.73 Aligned_cols=128 Identities=16% Similarity=0.165 Sum_probs=96.8
Q ss_pred CCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHhhhhcchhh
Q 019567 13 GWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGVAMPA 92 (339)
Q Consensus 13 ~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~~~~~~~ 92 (339)
+.+....+...+.+..+..++.++.+++.||+++|+++.+...+..+..++. ...++... ...-.+.|++.+..+|.
T Consensus 265 ~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~--~~~~~~~~-~~~l~~~glf~s~~fp~ 341 (410)
T TIGR00885 265 GMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGS--IFAGGHVG-LYCLTLCSAFMSLMFPT 341 (410)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH--HHcCChHH-HHHHHHHHHHHHHHHHH
Confidence 3334444556667778889999999999999999999999888888888777 43555433 66778888989999999
Q ss_pred hHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhc------cchHHHHHHH
Q 019567 93 MSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTI------GISGPFILFS 145 (339)
Q Consensus 93 ~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~------~w~~~f~~~~ 145 (339)
..++..+..+++.+....++... .+|..+.|++.|.+.|.. +.+..|++..
T Consensus 342 i~sl~~~~~g~~~~~~s~~l~~~--~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~ 398 (410)
T TIGR00885 342 IYGIALKGLGQDTKYGAAGLVMA--IIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPL 398 (410)
T ss_pred HHHHHHhhhhhhhhhhHHHHHHH--HhccchHHHHHHHHHHHhcccccCccchHHHHHH
Confidence 99999999975543333333332 399999999999999954 4777777643
No 234
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.60 E-value=2.3e-07 Score=79.33 Aligned_cols=149 Identities=17% Similarity=0.160 Sum_probs=116.1
Q ss_pred hHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHH--HHHHHHHHHHHHhhhhhcchhHHHHHHHHHHhh
Q 019567 8 LAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAW--GVALWSLSTLLTPWAATHSTASLLAVRAFFGLA 85 (339)
Q Consensus 8 i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g 85 (339)
+.|.+..+..+.|...--..+.+.++..+.|.++||++..+.+.. +++..++.+... -+++++..+.+-++..|++
T Consensus 297 m~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~i--P~~~~~~~L~vp~~~l~~~ 374 (464)
T KOG3764|consen 297 MLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPI--PFATSIAQLWVPNFGLGFG 374 (464)
T ss_pred HHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchh--HhhhhHHHHhhhhHHHHHH
Confidence 556677666688888888889999999999999999995444443 333334333334 4589999999999999988
Q ss_pred hhcchhhhHHHHhhhCCcc------hhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhh
Q 019567 86 EGVAMPAMSTLTSRWFPSH------ERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSK 158 (339)
Q Consensus 86 ~~~~~~~~~~~i~~~~~~~------~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~ 158 (339)
.+...........+..+.+ .-|...++...++.+|..+||.+++.+.+..|++|.-.+.++..++...+....
T Consensus 375 i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n~iyapvl~ll 453 (464)
T KOG3764|consen 375 IGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGILNLIYAPVLLLL 453 (464)
T ss_pred HHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHHHHHHHHHHHHHHHHHH
Confidence 8877776666666665433 346888999999999999999999999999999999999999888866655544
No 235
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.58 E-value=2.9e-06 Score=76.33 Aligned_cols=157 Identities=11% Similarity=0.035 Sum_probs=102.0
Q ss_pred hhhh-HhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhh---hhcchhHHHHHHH
Q 019567 5 VVPL-AAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWA---ATHSTASLLAVRA 80 (339)
Q Consensus 5 ~~~i-~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~r~ 80 (339)
.|.+ ++.+|.++.+.++.......+..++..+.+++.+|..+++.......+..++..+.... ..++++..++..+
T Consensus 241 ~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~ 320 (413)
T PRK15403 241 SPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLWPHVWLWSVLGTS 320 (413)
T ss_pred ChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHH
Confidence 4554 45569999999999888888888888888887765555444433333333333332111 1234444577888
Q ss_pred HHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhcc
Q 019567 81 FFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVT 160 (339)
Q Consensus 81 l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~ 160 (339)
+.++|.+...|......-+ -....+|++.++.+.....+...++..++++.++ +-+.+|...+++..+.....+....
T Consensus 321 l~~~G~~~~~p~~~~~al~-~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (413)
T PRK15403 321 LYAFGIGLIFPTLFRFTLF-SNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFN-GGRLPFHLLAVVAGVIVVFTLAGLL 398 (413)
T ss_pred HHHHHHHHHhHHHHHHHhc-cCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCchHHHHHHHHHHHHHHHHHHHHH
Confidence 8999988887777753321 1223579999999998888889999999888765 5577777666665554444443333
Q ss_pred CCC
Q 019567 161 NDP 163 (339)
Q Consensus 161 ~~~ 163 (339)
+++
T Consensus 399 ~~~ 401 (413)
T PRK15403 399 NRV 401 (413)
T ss_pred hhh
Confidence 333
No 236
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.46 E-value=1.7e-05 Score=68.82 Aligned_cols=147 Identities=18% Similarity=0.144 Sum_probs=121.3
Q ss_pred HhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhh-hhcchHHHHHHHHHHHHHHHHHhh-hhhcchhHHHHHHHHHHhhh
Q 019567 9 AAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVD-KYGGKKVLAWGVALWSLSTLLTPW-AATHSTASLLAVRAFFGLAE 86 (339)
Q Consensus 9 ~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~d-r~G~r~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~r~l~G~g~ 86 (339)
.+-||.+..|...+++.+..|..++....|++.. |.++|+.-..++....++..+..+ +...+.+.+...-++.|++.
T Consensus 236 g~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~ 315 (403)
T PF03209_consen 236 GEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGN 315 (403)
T ss_pred hHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhh
Confidence 3558999999999999999999999999999888 678888888888877776665422 23567889999999999999
Q ss_pred hcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhh----------ccchHHHHHHHHHHHHHHHHH
Q 019567 87 GVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLST----------IGISGPFILFSSLGLLWLSTW 155 (339)
Q Consensus 87 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~----------~~w~~~f~~~~~~~~~~~~~~ 155 (339)
|.......+...|..++++.|..+|.+.....++..++..+++.+.|. .++-.+|.+.++..++...+.
T Consensus 316 G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll 394 (403)
T PF03209_consen 316 GLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVLL 394 (403)
T ss_pred hHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999887652 245667777776665554443
No 237
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.43 E-value=1e-05 Score=74.95 Aligned_cols=158 Identities=19% Similarity=0.195 Sum_probs=103.9
Q ss_pred hhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhc--c---------hhH
Q 019567 6 VPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATH--S---------TAS 74 (339)
Q Consensus 6 ~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~--~---------~~~ 74 (339)
+.+-++.|.+... .+......+...++..+...+.||+|||+.++.+...+.++.++.+..... + ...
T Consensus 319 ~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (513)
T KOG0254|consen 319 TTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLA 397 (513)
T ss_pred HHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHH
Confidence 4455555555443 455556666777888888999999999999999999999999887543211 1 111
Q ss_pred HH-HHHHHHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHH
Q 019567 75 LL-AVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLS 153 (339)
Q Consensus 75 ~~-~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~ 153 (339)
+. .+-++..+. ....+....+.+|.+|.+.|+++.++......+...+-......+.+..++...|...+..+.+...
T Consensus 398 ~~~~~~~v~~f~-~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~ 476 (513)
T KOG0254|consen 398 IVFLCLFIFSFA-IGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGICLLSLI 476 (513)
T ss_pred HHHHHHHHHHHh-cccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHH
Confidence 11 222222222 2234555678899999999999999987777766555544444444444456677777777766666
Q ss_pred -HHHhhccCCCCC
Q 019567 154 -TWTSKVTNDPCN 165 (339)
Q Consensus 154 -~~~~~~~~~~~~ 165 (339)
..+.+.||++..
T Consensus 477 ~fv~~~~pETkg~ 489 (513)
T KOG0254|consen 477 IFVFFFVPETKGL 489 (513)
T ss_pred HHheEEcccCCCC
Confidence 567777887654
No 238
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.40 E-value=3.2e-06 Score=76.76 Aligned_cols=87 Identities=10% Similarity=0.153 Sum_probs=70.7
Q ss_pred chhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccchhhHhhHHhHHHHHHHHhhhhhhhHHH-HHhccchHHHHHHH
Q 019567 199 KLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSL-IKAGYSLTLVRKIM 277 (339)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~ 277 (339)
.+.++......+...+.+++...++|.|+++.+|+++.+++...........++.+++|+++||+ ||| +.
T Consensus 8 p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrr---------r~ 78 (493)
T PRK15462 8 PRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNR---------MA 78 (493)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcH---------HH
Confidence 34567777777888889999999999999998999999999999999888899999999999999 875 44
Q ss_pred HHHHhhhhhhHhhhhhc
Q 019567 278 QSIGFIGPGVSLLCLNY 294 (339)
Q Consensus 278 ~~~~~~~~~~~~~~~~~ 294 (339)
+..+.+...++.+++..
T Consensus 79 iliG~il~~lg~lll~~ 95 (493)
T PRK15462 79 VMLGALLMAIGHVVLGA 95 (493)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 55666666666555543
No 239
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.37 E-value=0.00074 Score=61.40 Aligned_cols=246 Identities=10% Similarity=-0.002 Sum_probs=138.1
Q ss_pred ccchhHHHHHHHH-HHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcc-----------------------
Q 019567 16 SSFLGIVQSSFLW-GYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHS----------------------- 71 (339)
Q Consensus 16 ~~~~g~~~s~~~~-~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~----------------------- 71 (339)
++.+..+-....+ ...+......+++||++|++++-+....+.....+.++..-|+
T Consensus 57 ae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~ 136 (491)
T PF03219_consen 57 AEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKG 136 (491)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHH
Confidence 4445555553333 4456678899999999999988877766666555554321111
Q ss_pred ------hhHHHHHHHHHHhhhhcchh-hhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhh---------hc
Q 019567 72 ------TASLLAVRAFFGLAEGVAMP-AMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLS---------TI 135 (339)
Q Consensus 72 ------~~~~~~~r~l~G~g~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~---------~~ 135 (339)
.|...+..+..-+-.....+ .-.....|.++.+|-.|..++...+.++|.++++.+...+.+ .-
T Consensus 137 ~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~~ 216 (491)
T PF03219_consen 137 FIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGVD 216 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccc
Confidence 11222222222222222222 347778999999999999999999999999999999888877 12
Q ss_pred cchHHHHHH----HHHHHHHHHHHHhhccCCCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHh
Q 019567 136 GISGPFILF----SSLGLLWLSTWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANIT 211 (339)
Q Consensus 136 ~w~~~f~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (339)
.|....... .+.+.+.........++..+++... +...++++++++..-..+.+.++|+|....+++...+
T Consensus 217 ~~~~~l~~l~~~v~~~g~~i~~~~~~~~~~vl~~~~~~-----~~~~~~kk~k~k~s~~es~k~l~kS~yL~~Ia~lvi~ 291 (491)
T PF03219_consen 217 AWELSLNSLMGIVLILGIVIILLYRYMNKNVLTDPRFY-----PSAKKKKKKKPKMSLKESFKLLLKSKYLLCIALLVIA 291 (491)
T ss_pred cHhHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccccc-----hhhhcccccCCCccHHHHHHHHHhCHHHHHHHHHHHH
Confidence 355433221 2222222222222222221111110 0000111111122223456778889988888877777
Q ss_pred hHHHHHHHHHhhhhhhhhhhCCccchh---hHhhHHhHHHHHHHHhhhhhhhHHHHHh
Q 019567 212 NNWGYFVLLSWMPIYFNTVFNVNLKQA---AWFSAVPWGTMAVSGYMAGKASDSLIKA 266 (339)
Q Consensus 212 ~~~~~~~~~~~~~~~l~~~~g~~~~~~---~~~~~~~~~~~~~~~~~~g~l~d~~~~~ 266 (339)
++..........-..+++.+.-+.+.+ |......++..++..++++.+.+|+|-+
T Consensus 292 Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~ 349 (491)
T PF03219_consen 292 YGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWR 349 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 777666666555555555443222222 3344455555666667778888887754
No 240
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.31 E-value=3.9e-05 Score=69.56 Aligned_cols=142 Identities=12% Similarity=-0.004 Sum_probs=111.9
Q ss_pred HHHHHHHHHHHHHHhhhHHHhhhhcc-hHHHHHHHHHHHHHHHHHhhhhhcc---------------------hhHHHHH
Q 019567 21 IVQSSFLWGYIFSSVIGGALVDKYGG-KKVLAWGVALWSLSTLLTPWAATHS---------------------TASLLAV 78 (339)
Q Consensus 21 ~~~s~~~~~~~i~~~~~g~l~dr~G~-r~~l~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~ 78 (339)
|....+.+...+.+++..++.+|+|+ |++..++.++.+++.+...+ .++ .+..++.
T Consensus 309 ~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~--i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 386 (477)
T TIGR01301 309 FGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVL--VTYVAKNSRYYDGDGESLPPPTGIKASALIV 386 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHH--HHhhhhccccccccccccCcchhhHHHHHHH
Confidence 44445555556777888899999995 67778888888877776632 222 3667788
Q ss_pred HHHHHhhhhcchhhhHHHHhhhCCc--chhhHHHHHHHHHHHHHHHHHHhHHHHhhhhcc--chHHHHHHHHHHHHHHHH
Q 019567 79 RAFFGLAEGVAMPAMSTLTSRWFPS--HERASAIGICMGGFHLGNVVGLLLTPIMLSTIG--ISGPFILFSSLGLLWLST 154 (339)
Q Consensus 79 r~l~G~g~~~~~~~~~~~i~~~~~~--~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~--w~~~f~~~~~~~~~~~~~ 154 (339)
-.+.|+..+.....-++++++..++ ++.|..+|+.+.+..+.+++..+..+.+.+.+| -.+.+.+.++..++..+.
T Consensus 387 ~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~ 466 (477)
T TIGR01301 387 FAILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLL 466 (477)
T ss_pred HHHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHH
Confidence 8899999999999999999999985 456999999999999999999988888666554 566788888888888888
Q ss_pred HHhhccCCCC
Q 019567 155 WTSKVTNDPC 164 (339)
Q Consensus 155 ~~~~~~~~~~ 164 (339)
.++.+|+.++
T Consensus 467 ~~~~~~~~~~ 476 (477)
T TIGR01301 467 ALILLPRPRV 476 (477)
T ss_pred HHHhCCCCCC
Confidence 8888887664
No 241
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.30 E-value=1.4e-05 Score=68.95 Aligned_cols=143 Identities=20% Similarity=0.247 Sum_probs=115.4
Q ss_pred hhhhHhH-hCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHH
Q 019567 5 VVPLAAK-FGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFG 83 (339)
Q Consensus 5 ~~~i~~~-~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G 83 (339)
++...+| .|.++.+.....+.+..+..+|.++..++..|+...|.+....++..+-++.. +.+++... +.+-++.|
T Consensus 259 l~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~--~l~~g~v~-~~~l~~ig 335 (422)
T COG0738 259 LVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAV--ALIGGVVA-LYALFLIG 335 (422)
T ss_pred HHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH--HHhcChHH-HHHHHHHH
Confidence 4455555 88899999999999999999999999999999999999998888877777777 55777444 44567788
Q ss_pred hhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHH
Q 019567 84 LAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWL 152 (339)
Q Consensus 84 ~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~ 152 (339)
+..+..+|...++-.+..| + .....|..-....+|.++-|.+-|++.|+.|-...+.....+|.+..
T Consensus 336 ~F~simfPTIfslal~~l~-~-~ts~~s~~l~maivGGAiiP~l~G~i~d~~g~~~~~~~~pllc~lyV 402 (422)
T COG0738 336 LFNSIMFPTIFSLALKNLG-E-HTSVGSGLLVMAIVGGAIIPPLQGVIADMFGIQLTFLIVPLLCYLYV 402 (422)
T ss_pred HHhHHHHHHHHHHHHhccC-c-cccccceeeeeheecchHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 9999999999999999987 3 33344444556678999999999999999999888886666666654
No 242
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.25 E-value=1e-05 Score=73.13 Aligned_cols=149 Identities=13% Similarity=0.065 Sum_probs=100.8
Q ss_pred hHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcc---------hHHHHHHHHHHHHHHHHHhhhhhcc-hhHHHH
Q 019567 8 LAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGG---------KKVLAWGVALWSLSTLLTPWAATHS-TASLLA 77 (339)
Q Consensus 8 i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~---------r~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 77 (339)
+.+-+|.|..+.|++.++..+...+..+++|.++||.-+ |..=.++....++..+.. .+.++ .....+
T Consensus 285 ~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l--~~~~~~~~~~a~ 362 (466)
T KOG2532|consen 285 LKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVL--AFTSDEHRLLAV 362 (466)
T ss_pred HHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHee--eecCCCcchHHH
Confidence 555689999999999999999999999999999998855 222233444444444444 22332 221222
Q ss_pred HHHHHHhhh-hcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhh---ccchHHHHHHHHHHHHHHH
Q 019567 78 VRAFFGLAE-GVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLST---IGISGPFILFSSLGLLWLS 153 (339)
Q Consensus 78 ~r~l~G~g~-~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~---~~w~~~f~~~~~~~~~~~~ 153 (339)
.-+..+.+. |...+....-..|.. +++-+..+|+.+....+...++|.+.+.+.++ -.||.+|++.+++.++..+
T Consensus 363 ~~l~~~~~~~g~~~~Gf~~~~~~~a-pq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i 441 (466)
T KOG2532|consen 363 ILLTIAIGLSGFNISGFYKNHQDIA-PQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNI 441 (466)
T ss_pred HHHHHHHHHcccchhhhHhhhhhcc-chHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhch
Confidence 222222222 222222233333334 58889999999999999999999999998842 3699999999998888776
Q ss_pred HHHhhc
Q 019567 154 TWTSKV 159 (339)
Q Consensus 154 ~~~~~~ 159 (339)
...++-
T Consensus 442 ~f~~f~ 447 (466)
T KOG2532|consen 442 IFLFFG 447 (466)
T ss_pred heeEee
Confidence 555553
No 243
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.23 E-value=1.7e-05 Score=70.83 Aligned_cols=132 Identities=8% Similarity=0.019 Sum_probs=97.5
Q ss_pred HHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHH
Q 019567 195 HLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVR 274 (339)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~ 274 (339)
+++.+++...+.+...+..++.....+++=-+++| .+-.+..-|........+.++.-+..+++.+|+|+.
T Consensus 366 ~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled-~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv-------- 436 (618)
T KOG3762|consen 366 KVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLED-LGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHV-------- 436 (618)
T ss_pred HHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhh-cCCcceeeeehhhhhccchHHHHHHHHHHHHHhccc--------
Confidence 56677777777777777777777777787778888 465666677666666677888889999999999975
Q ss_pred HHHHHHHhhhhhhHhhhhhcccchhHHHHHHHHHHHHhhhcccchhhhhh-hc-ccchhhhhhh
Q 019567 275 KIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQ-IA-QDFSTALQIQ 336 (339)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-p~~~g~~~g~ 336 (339)
.++..++.+...=++.+....++|....+=++-....+..+....+.+. +. |+.+.++++.
T Consensus 437 -~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l 499 (618)
T KOG3762|consen 437 -NVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGL 499 (618)
T ss_pred -ceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHH
Confidence 5667788888888888888888887766666666677777777777777 44 4556665554
No 244
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.22 E-value=7.9e-09 Score=94.02 Aligned_cols=157 Identities=19% Similarity=0.255 Sum_probs=106.3
Q ss_pred hhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHh--hhh-hcc-----hhHHHH
Q 019567 6 VPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTP--WAA-THS-----TASLLA 77 (339)
Q Consensus 6 ~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~--~~~-~~~-----~~~~~~ 77 (339)
|.+.++.+.++. -.......+...++.++...+.||+|||+.++.+..+.+++.+..+ ... .++ ...+.
T Consensus 277 ~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~- 353 (451)
T PF00083_consen 277 PSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIV- 353 (451)
T ss_pred cccccccccccc--cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccce-
Confidence 445556666555 1222233344556777777999999999999999988887777663 111 121 22222
Q ss_pred HHHHHHhhhh-cchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHH
Q 019567 78 VRAFFGLAEG-VAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWT 156 (339)
Q Consensus 78 ~r~l~G~g~~-~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~ 156 (339)
.-.+.....+ ...+....+..|.+|.+.|++..++......++..+++.+...+.+..+-...+.+.+..+++..+..+
T Consensus 354 ~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~ 433 (451)
T PF00083_consen 354 FLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVY 433 (451)
T ss_pred eeeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHHHHHHHhhee
Confidence 2222222222 234666688899999999999999999999999999998887777766634556666677777777788
Q ss_pred hhccCCCCC
Q 019567 157 SKVTNDPCN 165 (339)
Q Consensus 157 ~~~~~~~~~ 165 (339)
++.||++.+
T Consensus 434 ~~lpET~g~ 442 (451)
T PF00083_consen 434 FFLPETKGK 442 (451)
T ss_pred EEEeeCCCC
Confidence 888998764
No 245
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=98.18 E-value=2.2e-05 Score=69.59 Aligned_cols=111 Identities=19% Similarity=0.208 Sum_probs=90.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhcc-------hhHHHHHHHHHHhhhhcchhhhHHHHhhhCCcc---hhhHHHHHHHHHH
Q 019567 48 KVLAWGVALWSLSTLLTPWAATHS-------TASLLAVRAFFGLAEGVAMPAMSTLTSRWFPSH---ERASAIGICMGGF 117 (339)
Q Consensus 48 ~~l~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~ 117 (339)
|++.++.++..+|.++..++..++ .+.++++-.+.++|.|+.-|...++.+|.++++ +|.+...++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 678889999999998853332222 257899999999999999999999999999765 5677889999999
Q ss_pred HHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhh
Q 019567 118 HLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSK 158 (339)
Q Consensus 118 ~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~ 158 (339)
++|..++..+.+++.++.+|.+.|.+.++..++..+..+..
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCC
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999888877766655443
No 246
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.16 E-value=3.1e-06 Score=73.97 Aligned_cols=159 Identities=14% Similarity=0.117 Sum_probs=108.7
Q ss_pred chhhhHhHhCCCccchhH--------HHHHH-HHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcc---
Q 019567 4 AVVPLAAKFGWSSSFLGI--------VQSSF-LWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHS--- 71 (339)
Q Consensus 4 ~~~~i~~~~~~s~~~~g~--------~~s~~-~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~--- 71 (339)
....+-+++++.+.+... ...+. .+++..+-.+...+.|++|||+..+.+.+++++..+.. +...|
T Consensus 326 ~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~--~~~y~~~~ 403 (538)
T KOG0252|consen 326 FQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVI--AGPYNQLE 403 (538)
T ss_pred HHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHH--cCCccccc
Confidence 345566666665554333 11111 12223355667789999999999999999999988887 43444
Q ss_pred -hhHHHHHHHHHHhhhh-cchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhh-----hccchHHHHHH
Q 019567 72 -TASLLAVRAFFGLAEG-VAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLS-----TIGISGPFILF 144 (339)
Q Consensus 72 -~~~~~~~r~l~G~g~~-~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~-----~~~w~~~f~~~ 144 (339)
...+++...+..+... +-......+-+|.+|.+-|+..-|+..+..-.|.+++...-.++.+ ..+-|.++++.
T Consensus 404 ~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~ 483 (538)
T KOG0252|consen 404 NTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIIL 483 (538)
T ss_pred ccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHH
Confidence 2223333333333211 1223445566899999999999999999999999999999889988 77899999999
Q ss_pred HHHHHHHHHHHHhhccCCCCC
Q 019567 145 SSLGLLWLSTWTSKVTNDPCN 165 (339)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~ 165 (339)
+..+++..+..+ +.||++.+
T Consensus 484 ~~~~~~gi~~T~-l~pEtk~~ 503 (538)
T KOG0252|consen 484 AGCMLLGILFTL-LIPETKGK 503 (538)
T ss_pred HHHHHHhHheeE-Eeeccccc
Confidence 888877555444 45676654
No 247
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.16 E-value=0.00014 Score=67.53 Aligned_cols=150 Identities=15% Similarity=0.095 Sum_probs=107.3
Q ss_pred HHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcch-hHHHHHHHHHHhhhhcchhhhHHHHhh
Q 019567 21 IVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHST-ASLLAVRAFFGLAEGVAMPAMSTLTSR 99 (339)
Q Consensus 21 ~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~r~l~G~g~~~~~~~~~~~i~~ 99 (339)
.................+...||+|||.....+..+..++.+..++...... +...+...+...+.+..+.....+..|
T Consensus 354 ~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 433 (521)
T KOG0255|consen 354 LNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAE 433 (521)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3344444445555666689999999999999999999999999855322222 245566666666666667777999999
Q ss_pred hCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCh
Q 019567 100 WFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVSK 171 (339)
Q Consensus 100 ~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (339)
.+|...|..+.+..+....+|.+++|.+...... ......+.+.+..+.+...+...+.||+.......+.
T Consensus 434 l~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~lpet~~~~l~~t~ 504 (521)
T KOG0255|consen 434 LIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQ-MFPLLGLILFGWLALLLGLLSLLLLPETKGKPLPGTL 504 (521)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcccchHHHHHHHHHHHHHHHHhcCcccCCCCCchhH
Confidence 9999999999999999999999999988755544 2223333334556666666666788888776554333
No 248
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.16 E-value=1.4e-05 Score=52.90 Aligned_cols=61 Identities=15% Similarity=0.094 Sum_probs=54.6
Q ss_pred HHHHHHhhHHHHHHHHHhhhhhhhhhhCCccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHh
Q 019567 205 VIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKA 266 (339)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~ 266 (339)
+-...++..........++|.|+++ .|+|+.+.|.+.++..+...++.+++|+++||.+++
T Consensus 5 lk~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~ 65 (77)
T PF12832_consen 5 LKAFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKR 65 (77)
T ss_pred HHHHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCcc
Confidence 4456677777888888999999998 699999999999999999999999999999999886
No 249
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.16 E-value=6.5e-06 Score=54.44 Aligned_cols=55 Identities=24% Similarity=0.303 Sum_probs=48.0
Q ss_pred cchhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHH
Q 019567 3 VAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALW 57 (339)
Q Consensus 3 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~ 57 (339)
|.+|...++.|+|+.|+|.+.++..+...++++++|.++||+++++.+.....++
T Consensus 21 Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 21 PFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred hhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 4556667789999999999999999999999999999999999998887765543
No 250
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.05 E-value=4.3e-05 Score=68.25 Aligned_cols=107 Identities=12% Similarity=-0.077 Sum_probs=79.8
Q ss_pred HhhhhhhhhhhCCccch-hhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhcccchh
Q 019567 221 SWMPIYFNTVFNVNLKQ-AAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPA 299 (339)
Q Consensus 221 ~~~~~~l~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (339)
.+...++.+.+|++.++ .+.+...+..+..+..+++|+++||+|.| +++..+.+...+...+..+.++..
T Consensus 46 s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K---------~vL~l~~l~Wsl~t~L~~fa~Sl~ 116 (511)
T TIGR00806 46 SFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYK---------PVLVLQALSFVCVWLLLLLGTSVW 116 (511)
T ss_pred HHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCch---------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455666679999999 99999999999999999999999999976 677788888888888877776655
Q ss_pred HHHHHHHHHHHHhhhcccchhhhhh--hcccchhhhhhhh
Q 019567 300 VAAVLITIALSLSSFSQAGYLLNIQ--IAQDFSTALQIQQ 337 (339)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~~g~~~g~q 337 (339)
...+.=++.+...+... ....... +.+++++++.+.-
T Consensus 117 ~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~ 155 (511)
T TIGR00806 117 HMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYS 155 (511)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHH
Confidence 54444444444444444 4444444 7778898887753
No 251
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.03 E-value=2.1e-05 Score=71.46 Aligned_cols=141 Identities=11% Similarity=0.109 Sum_probs=89.8
Q ss_pred hhhhHhH-hCCCccchhHHHHHHHHHHHHHHhhhHHHhhh----hcchHHHHHHHHHHHHHH-HHHhhhhhcchhHHHHH
Q 019567 5 VVPLAAK-FGWSSSFLGIVQSSFLWGYIFSSVIGGALVDK----YGGKKVLAWGVALWSLST-LLTPWAATHSTASLLAV 78 (339)
Q Consensus 5 ~~~i~~~-~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr----~G~r~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 78 (339)
+|.+-++ .|.|..+.+.+...+.++..++.+++|.++|| ..+|........+..+.. +.. ...++.......
T Consensus 296 lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~~~l--~~~~~~~~~~~~ 373 (495)
T KOG2533|consen 296 LPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAIIGAISL--LAAAVLPGAYGA 373 (495)
T ss_pred HHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHH--HhhccchHHhHH
Confidence 4566666 56899999999999999999999999999999 677777776666665544 433 223334444444
Q ss_pred HHHHHhhhhcchhhhHHHHhhhCCcchh-hHHHHHHHHHHHHHHHHHHhH-HHHhhhhccchHHHHHHHHH
Q 019567 79 RAFFGLAEGVAMPAMSTLTSRWFPSHER-ASAIGICMGGFHLGNVVGLLL-TPIMLSTIGISGPFILFSSL 147 (339)
Q Consensus 79 r~l~G~g~~~~~~~~~~~i~~~~~~~~r-~~~~~~~~~~~~~g~~~~~~l-~~~l~~~~~w~~~f~~~~~~ 147 (339)
-+....+.....+.......+...++.| -...+....+.+.+..++|.+ .+.....+.|-..|......
T Consensus 374 ~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~y~~~~~f~~~~~~ 444 (495)
T KOG2533|consen 374 FLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDAPRYGWGAVFYMLVAA 444 (495)
T ss_pred HHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccCcchhhhhHHHHHHHH
Confidence 4444444555666677777777754433 334444445555544444433 34455567888888544333
No 252
>PTZ00207 hypothetical protein; Provisional
Probab=97.97 E-value=0.00015 Score=67.30 Aligned_cols=150 Identities=15% Similarity=0.049 Sum_probs=108.2
Q ss_pred hhhHhHh-CCCc-cchhH-HHHHHHHHHHHHHhhhHHHhhh---------hcchHHHHHHHHHHHHHHHHHhhhhhcchh
Q 019567 6 VPLAAKF-GWSS-SFLGI-VQSSFLWGYIFSSVIGGALVDK---------YGGKKVLAWGVALWSLSTLLTPWAATHSTA 73 (339)
Q Consensus 6 ~~i~~~~-~~s~-~~~g~-~~s~~~~~~~i~~~~~g~l~dr---------~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~ 73 (339)
.+|.+.+ |.++ .+... +.+++.++..+|.+..|.+... +.|--.+.+..+ +.++.++. +..-...
T Consensus 377 ~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~-~~~~~lll--~~~~p~~ 453 (591)
T PTZ00207 377 RFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSV-CIITMLTL--FLTLPKA 453 (591)
T ss_pred HHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHH-HHHHHHHH--HHHCCcc
Confidence 3566777 5522 32222 7888888888888888887722 222223334444 66666666 3333336
Q ss_pred HHHHHHHHHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHH-HhHHHHhhhhc----------c---chH
Q 019567 74 SLLAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVG-LLLTPIMLSTI----------G---ISG 139 (339)
Q Consensus 74 ~~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~-~~l~~~l~~~~----------~---w~~ 139 (339)
.+++.-++.|++.|..++.....++|.|. |+-|+-..+......+|..+- ..+.|.+.|.- | .|.
T Consensus 454 ~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~ 532 (591)
T PTZ00207 454 ALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVM 532 (591)
T ss_pred HhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHh
Confidence 89999999999999999999999999998 999999999999999998887 45667666521 1 788
Q ss_pred HHHHHHHHHHHHHHHHHhhc
Q 019567 140 PFILFSSLGLLWLSTWTSKV 159 (339)
Q Consensus 140 ~f~~~~~~~~~~~~~~~~~~ 159 (339)
+|++.+.+++...+......
T Consensus 533 ~~~v~~~~~~~g~~~s~~l~ 552 (591)
T PTZ00207 533 PLAFLLGLSFLAFITSTYVH 552 (591)
T ss_pred HHHHHHHHHHHHHHHHhhee
Confidence 99999999888776655443
No 253
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.93 E-value=0.0005 Score=63.74 Aligned_cols=111 Identities=18% Similarity=0.199 Sum_probs=87.0
Q ss_pred chhHHHHHHHHHHHHHHhhhHHHhhhhcc-hHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHhhhhcchhhhHHH
Q 019567 18 FLGIVQSSFLWGYIFSSVIGGALVDKYGG-KKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGVAMPAMSTL 96 (339)
Q Consensus 18 ~~g~~~s~~~~~~~i~~~~~g~l~dr~G~-r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~~~~~~~~~~~ 96 (339)
+.++....+.++...++.+.|.+..+++| |+.++++.+++.++...+.....+|....+..-++.|++.|.........
T Consensus 350 ~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~ 429 (599)
T PF06609_consen 350 EIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVI 429 (599)
T ss_pred eeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHe
Confidence 57888888999999999999999998887 55556777666654444422334566677788899999999988888887
Q ss_pred HhhhCCcchhhHHHHHHHHHHHHHHHHHHhHH
Q 019567 97 TSRWFPSHERASAIGICMGGFHLGNVVGLLLT 128 (339)
Q Consensus 97 i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~ 128 (339)
..-..|+++-+.+.++....-.+|..+|..+.
T Consensus 430 ~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy 461 (599)
T PF06609_consen 430 AQLIVPDEDIGTATGLTGSIRSIGGSIGYAIY 461 (599)
T ss_pred eEeeeCchHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 77778888999999998888888888877654
No 254
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=97.92 E-value=0.0023 Score=55.17 Aligned_cols=241 Identities=14% Similarity=0.062 Sum_probs=131.4
Q ss_pred chhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhh-----hhcchHHHHH-HHHHHHHHHHHHhhh---------h
Q 019567 4 AVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVD-----KYGGKKVLAW-GVALWSLSTLLTPWA---------A 68 (339)
Q Consensus 4 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~d-----r~G~r~~l~~-~~~~~~~~~~~~~~~---------~ 68 (339)
.+|.+-+.=|.|.++.+...-++.= ...-+.+.++.| |+||||.-++ +..+.+......+.- .
T Consensus 52 ~iP~lL~ak~vSyt~~a~fS~ay~P--~sLKllWaPiVDs~y~k~~GrrksWvvp~q~llG~~mllLs~~v~~~~g~ng~ 129 (510)
T KOG3574|consen 52 AIPLLLQAKGVSYTSQAIFSFAYWP--FSLKLLWAPIVDSVYSKRFGRRKSWVVPCQYLLGLFMLLLSYLVDRGLGGNGG 129 (510)
T ss_pred hhHHHhcCCCcchhhhhhhhhhhhH--HHHHHHHHhhhHHHHHHhhccccceeeehHHHHHHHHHHHhhCCCcccccCCC
Confidence 4677777777777776554433221 234678888999 9999885433 222222222222110 1
Q ss_pred hcchhHHHHHHHHHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhh-------hccch---
Q 019567 69 THSTASLLAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLS-------TIGIS--- 138 (339)
Q Consensus 69 ~~~~~~~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~-------~~~w~--- 138 (339)
.+|...+...-++.-+..+.-..+.-.+.-...++++.|-+......+.+.|..++..+--.+.. ..+|.
T Consensus 130 ~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~ifLaL~s~dF~N~y~rs~P~~~ 209 (510)
T KOG3574|consen 130 LPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNVVFLALESPDFCNTYLRSIPLDQ 209 (510)
T ss_pred CcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhcceeeEecChhhhhHHHhcCcCcc
Confidence 22333333445566666666666666776677777887777777666666666666543211111 11232
Q ss_pred ------HHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhh
Q 019567 139 ------GPFILFSSLGLLWLSTWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITN 212 (339)
Q Consensus 139 ------~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (339)
...++.+.+.++...+..+..+|++++.. ++.+. ...+..+-++++++-|.+..........
T Consensus 210 g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~~~~~--~e~~~----------~i~~~yk~l~~vLklk~v~~la~i~lt~ 277 (510)
T KOG3574|consen 210 GFITLAGYLWFWGALFIVATTLVALLKKENDESVD--EELEL----------GIHESYKLLRDVLKLKSVRWLAGILLTG 277 (510)
T ss_pred ceEEhhHHHHHHHHHHHHHHHHHHHhcCCCchhhh--hhhhc----------CHHHHHHHHHHHHcCccHHHHHHHHHHH
Confidence 12333344444444444444333332210 00000 0111112457788888888888877777
Q ss_pred HHHHHHHHHhhhhhhhhhhCCccchhhHhhHHhHHHHHHHHhhhhhh
Q 019567 213 NWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKA 259 (339)
Q Consensus 213 ~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l 259 (339)
-.++.+-....+.-+.| +|.+.++-+.+.....-.+++.....|++
T Consensus 278 K~gf~a~da~t~LkLle-~Gv~ke~Lal~~v~~~plqI~l~~~~gk~ 323 (510)
T KOG3574|consen 278 KLGFQAADALTSLKLLE-HGVPKEELALIAVPLVPLQIALPLYIGKW 323 (510)
T ss_pred HHHhhhhhhccchHHHH-cCCChhHheeeeeehhhHHHhhhhhheee
Confidence 78888877888888888 59998887766533322333333333333
No 255
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.89 E-value=0.00037 Score=63.00 Aligned_cols=123 Identities=27% Similarity=0.300 Sum_probs=108.3
Q ss_pred hHhHhCCCccchhHHHHHHHHHHHHHHhhhH-HHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHhhh
Q 019567 8 LAAKFGWSSSFLGIVQSSFLWGYIFSSVIGG-ALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAE 86 (339)
Q Consensus 8 i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g-~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~ 86 (339)
+...+++++.+.+...+.......+++.+.. .+...+|-|++...|+....+..... +++++.|+.+....+.++.
T Consensus 268 l~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~--af~~~~w~~~~~~v~~~~~- 344 (463)
T KOG2816|consen 268 LKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLF--AFATETWMMFAAGVVVALA- 344 (463)
T ss_pred EeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHH--HHhccchhhhHHHHHHHhh-
Confidence 4456899999999999988888888888877 77888899999999999999999999 6689999999999888886
Q ss_pred hcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhh
Q 019567 87 GVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLS 133 (339)
Q Consensus 87 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~ 133 (339)
....|...+.++.+.+++++|+..++.+....+...++|.+-+.+..
T Consensus 345 ~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~ 391 (463)
T KOG2816|consen 345 GIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFA 391 (463)
T ss_pred cchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHH
Confidence 66789999999999999999999999999999999999988766643
No 256
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=97.88 E-value=0.00026 Score=57.73 Aligned_cols=100 Identities=18% Similarity=0.149 Sum_probs=57.5
Q ss_pred chhhHHHHHHHHHHHHHHHHHHhHHHHh---h--hhccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChHHHHHHH
Q 019567 104 HERASAIGICMGGFHLGNVVGLLLTPIM---L--STIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVSKSELRLIQ 178 (339)
Q Consensus 104 ~~r~~~~~~~~~~~~~g~~~~~~l~~~l---~--~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (339)
|+|+....+...+.++|.++.-..--.- . -.-+|++.+.+.+++.++.+++..++-.|-....+. +++++
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~fd~~~~~-~k~~k---- 76 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGKNFDIYSPK-EKQEK---- 76 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCcc-ccccc----
Confidence 5566666677777788877654332111 1 123599999999888877666666553322111111 01110
Q ss_pred hCCccccccCCCccHHHHhcchhHHHHHHHHHhh
Q 019567 179 AGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITN 212 (339)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (339)
++...+.+.+..+.+|++..|...+.+...
T Consensus 77 ----~~~~~~~~~s~~~~LK~K~tw~w~~~Yg~w 106 (267)
T PF07672_consen 77 ----ENSTLSKKPSYKSILKEKETWKWILIYGIW 106 (267)
T ss_pred ----ccccccccchHHHHHccchHHHHHHHHHHH
Confidence 012233446789999999988876655443
No 257
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.48 E-value=0.0024 Score=57.13 Aligned_cols=144 Identities=16% Similarity=0.043 Sum_probs=108.7
Q ss_pred cchhHHHHHHHHHHHHHHhhhHHHhhhhcch-------HHHHHHHHHHHHHHHHHhhh---hh-----cchhHHHHHHHH
Q 019567 17 SFLGIVQSSFLWGYIFSSVIGGALVDKYGGK-------KVLAWGVALWSLSTLLTPWA---AT-----HSTASLLAVRAF 81 (339)
Q Consensus 17 ~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r-------~~l~~~~~~~~~~~~~~~~~---~~-----~~~~~~~~~r~l 81 (339)
-..+|.++...+...+.+|+..++-.|.++| .-+-++..+.+.+.++.... .. .+.++++...++
T Consensus 324 vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l 403 (498)
T COG3104 324 VPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVL 403 (498)
T ss_pred cCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHH
Confidence 3457888999999999999998888885554 33456666666666655332 11 356889999999
Q ss_pred HHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHH------hhhhccchHHHHHHHHHHHHHHHHH
Q 019567 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPI------MLSTIGISGPFILFSSLGLLWLSTW 155 (339)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~------l~~~~~w~~~f~~~~~~~~~~~~~~ 155 (339)
+++|+=+..|.+.+++....|++-.+..++.+-.....|..++..+++. ..+...-...|..++...++..+..
T Consensus 404 ~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~ 483 (498)
T COG3104 404 QSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFIEGRVFGTIGVVAIVIGILL 483 (498)
T ss_pred HHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhhhhhhhHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999888888888877763 3334455667777777777666555
Q ss_pred Hhhcc
Q 019567 156 TSKVT 160 (339)
Q Consensus 156 ~~~~~ 160 (339)
....|
T Consensus 484 ~~~~~ 488 (498)
T COG3104 484 LLLSP 488 (498)
T ss_pred HHhhH
Confidence 54433
No 258
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.46 E-value=0.0014 Score=59.37 Aligned_cols=123 Identities=13% Similarity=0.145 Sum_probs=97.8
Q ss_pred CCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhh--------hcchhHHHHHHHHHHhh
Q 019567 14 WSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAA--------THSTASLLAVRAFFGLA 85 (339)
Q Consensus 14 ~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~r~l~G~g 85 (339)
.|+...+.+..+..++..++..+..+..-+..-|+++....++.++..+.--... .++.+..+.--++..+.
T Consensus 252 fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~ 331 (433)
T PF03092_consen 252 FSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVI 331 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHH
Confidence 7888888888888888899999999988888999999888888777665421100 12333344455666776
Q ss_pred hhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhcc
Q 019567 86 EGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIG 136 (339)
Q Consensus 86 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~ 136 (339)
....+-+...+++|.-|+...|...++.....++|..++..++..+.+.++
T Consensus 332 ~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~ 382 (433)
T PF03092_consen 332 GMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFG 382 (433)
T ss_pred HHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 677778888999999999999999999999999999999999999887665
No 259
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=97.40 E-value=0.00074 Score=55.70 Aligned_cols=114 Identities=12% Similarity=-0.008 Sum_probs=71.8
Q ss_pred HHHHHHHHHhhhhhhhhhhCCccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhh
Q 019567 213 NWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCL 292 (339)
Q Consensus 213 ~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (339)
....|.+..|.|.. ++.+|+|.+|...+.....++..+ .++.|.+.||++.+ ..+.++.+...+++..+
T Consensus 15 ~Gt~Y~Fs~yS~~L-k~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~---------~~l~iG~~~~~~GY~~~ 83 (250)
T PF06813_consen 15 SGTTYTFSAYSPQL-KSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPW---------VVLLIGAVLGFVGYGLL 83 (250)
T ss_pred cCcccchhhhhHHH-HHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchH---------HHHHHHHHHHHHHHHHH
Confidence 33456666666654 566899999999999888888876 58889999999875 66667777777777666
Q ss_pred hcc-----c--chhHHHHHHHHHHHHhhhcccchhhhhh-hcccchhhhhhhh
Q 019567 293 NYA-----K--SPAVAAVLITIALSLSSFSQAGYLLNIQ-IAQDFSTALQIQQ 337 (339)
Q Consensus 293 ~~~-----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~g~~~g~q 337 (339)
... + +.|.......++................ ..|++||.+.|..
T Consensus 84 ~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~~RG~vvgil 136 (250)
T PF06813_consen 84 WLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPRSRGTVVGIL 136 (250)
T ss_pred HHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCccccCceehhh
Confidence 543 1 1122222222222222222223223233 6689999987753
No 260
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=97.39 E-value=0.0022 Score=59.58 Aligned_cols=154 Identities=15% Similarity=0.089 Sum_probs=121.8
Q ss_pred chhhhHhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhh-cchHHHHHHHHHHHHHHHHHhhh-hhc-----------
Q 019567 4 AVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKY-GGKKVLAWGVALWSLSTLLTPWA-ATH----------- 70 (339)
Q Consensus 4 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~-G~r~~l~~~~~~~~~~~~~~~~~-~~~----------- 70 (339)
++..+.++++.+...+.-..+.+.-......+..+.++|-| ||-+++.++.++..++..+..+. ..+
T Consensus 60 lv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~ 139 (571)
T KOG1237|consen 60 LVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKP 139 (571)
T ss_pred HHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCC
Confidence 45667788888888888888888888889999999999976 99999999999998886654321 000
Q ss_pred --------c---hhHHHHHHHHHHhhhhcchhhhHHHHhhhCC---cc-h--hhHHHHHHHHHHHHHHHHHHhHHHHhhh
Q 019567 71 --------S---TASLLAVRAFFGLAEGVAMPAMSTLTSRWFP---SH-E--RASAIGICMGGFHLGNVVGLLLTPIMLS 133 (339)
Q Consensus 71 --------~---~~~~~~~r~l~G~g~~~~~~~~~~~i~~~~~---~~-~--r~~~~~~~~~~~~~g~~~~~~l~~~l~~ 133 (339)
+ ...+..+.-+..+|.|+.-|...+.=+|-++ ++ + +...+.++....+.|..++..+..++-+
T Consensus 140 ~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~ 219 (571)
T KOG1237|consen 140 GGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQD 219 (571)
T ss_pred CCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhh
Confidence 0 1356677778888999999999999999997 22 2 3367889999999999999999888888
Q ss_pred hccchHHHHHHHHHHHHHHHHHHh
Q 019567 134 TIGISGPFILFSSLGLLWLSTWTS 157 (339)
Q Consensus 134 ~~~w~~~f~~~~~~~~~~~~~~~~ 157 (339)
+.+|.+.|.+..+...+..++++.
T Consensus 220 ~~~w~lgf~i~~~~~~lai~iF~~ 243 (571)
T KOG1237|consen 220 NVGWKLGFGIPTVLNALAILIFLP 243 (571)
T ss_pred cccceeeccHHHHHHHHHHHHHHc
Confidence 999999999988877766555443
No 261
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=97.38 E-value=0.097 Score=47.06 Aligned_cols=247 Identities=9% Similarity=0.008 Sum_probs=138.9
Q ss_pred CccchhHHHHHHHH-HHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhh-------cc---------------
Q 019567 15 SSSFLGIVQSSFLW-GYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAAT-------HS--------------- 71 (339)
Q Consensus 15 s~~~~g~~~s~~~~-~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~-------~~--------------- 71 (339)
++..+.++-+..-+ +..+..++..++++++.+++++-+-+..+....+++++..- ++
T Consensus 59 gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l 138 (509)
T COG3202 59 GAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFL 138 (509)
T ss_pred cchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccc
Confidence 45567777777777 67788999999999999999998888888777777754311 11
Q ss_pred --------hhHHHHHHHHHHhhhhcchh-hhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhcc------
Q 019567 72 --------TASLLAVRAFFGLAEGVAMP-AMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIG------ 136 (339)
Q Consensus 72 --------~~~~~~~r~l~G~g~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~------ 136 (339)
.|.........=+=...... .-.....|....+|-.|..+.++.+.+++..++..+..++.++..
T Consensus 139 ~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~~ 218 (509)
T COG3202 139 KWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKHRDALASEF 218 (509)
T ss_pred eeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHhHHH
Confidence 02222222222221122212 335567788888889999999999999999999998888866321
Q ss_pred ----chHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChHHHHHHHhCCccccccCCCccHHHHhcchhHHHHHHHHHhh
Q 019567 137 ----ISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITN 212 (339)
Q Consensus 137 ----w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (339)
-+..+.+.+..+.+...+..+.-+...+++....+.. .++++++.+-.-..+.+.+.|+|..+.+.+...++
T Consensus 219 ~~~~~~~~~~vi~~~~~i~~~l~~~~~r~il~~~~f~~~~~----~kk~~~k~k~~~~~s~k~i~~SkyL~~ial~vl~Y 294 (509)
T COG3202 219 KDLLLQILFIVIVILGIIAILLYRYINRNVLTDPLFYLRAK----KKKKKKKLKLGLIESFKMILRSKYLGAIALLVLAY 294 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhHHHh----cccccccccCcHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 2344555555555555444444333333222110000 00000011111223566777888887777777666
Q ss_pred HHHHHHHHHhhhhhhhhhhCCccchhhHh---hHHhHHH-HHHHHhhhhhhhHHHHH
Q 019567 213 NWGYFVLLSWMPIYFNTVFNVNLKQAAWF---SAVPWGT-MAVSGYMAGKASDSLIK 265 (339)
Q Consensus 213 ~~~~~~~~~~~~~~l~~~~g~~~~~~~~~---~~~~~~~-~~~~~~~~g~l~d~~~~ 265 (339)
+.....+-..--.-.++.+..+.+..++. ....++. .++...+++.+.+|.|-
T Consensus 295 ~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW 351 (509)
T COG3202 295 GVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVGW 351 (509)
T ss_pred HHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhH
Confidence 66655444322222333233333333333 3333333 33344566777777664
No 262
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=97.31 E-value=0.00043 Score=51.45 Aligned_cols=87 Identities=9% Similarity=-0.099 Sum_probs=52.7
Q ss_pred hHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhcccchhHHHHHHHHHHHHhhhcccchhh
Q 019567 242 SAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLL 321 (339)
Q Consensus 242 ~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (339)
.....++..++.++.|++.||+++| +....+.....++.......++.+.......+.....+...+....
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 74 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRK---------PVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAA 74 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchh---------HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 3455677888999999999999876 4445555555555555555555554444444444444444444444
Q ss_pred hhh--hcccchhhhhhhh
Q 019567 322 NIQ--IAQDFSTALQIQQ 337 (339)
Q Consensus 322 ~~~--~~p~~~g~~~g~q 337 (339)
... ..+++++...+..
T Consensus 75 ~~~~~~~~~~~~~~~~~~ 92 (141)
T TIGR00880 75 LIADIYPPEERGVALGLM 92 (141)
T ss_pred HHHHHCChhhhhHHHHHH
Confidence 444 4456677776654
No 263
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.26 E-value=0.0018 Score=55.88 Aligned_cols=122 Identities=20% Similarity=0.259 Sum_probs=105.3
Q ss_pred hHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhc--chHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHhhhh
Q 019567 10 AKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYG--GKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEG 87 (339)
Q Consensus 10 ~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G--~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~~ 87 (339)
+.||.++.|.|-+.+...+...+.+....+..||.. -+-.+..++.+..-..++. ..++....+..+-.+-.+..+
T Consensus 290 ~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~lll--s~~~~~~~l~~~s~l~sf~~A 367 (451)
T KOG2615|consen 290 GRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLL--SLARTPVVLYLGSTLKSFSTA 367 (451)
T ss_pred CccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHH--hccccchhhhHHHHHHHHHHH
Confidence 568999999999999999999999999999999987 6667777766666666666 446777888899999999888
Q ss_pred cchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhh
Q 019567 88 VAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLS 133 (339)
Q Consensus 88 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~ 133 (339)
...+....++....|.++||..+|+......++-++||+++|.+..
T Consensus 368 ~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~ 413 (451)
T KOG2615|consen 368 SVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFS 413 (451)
T ss_pred HhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEE
Confidence 8888899999999999999999999999999999999999987755
No 264
>PRK03612 spermidine synthase; Provisional
Probab=97.23 E-value=0.013 Score=54.28 Aligned_cols=141 Identities=21% Similarity=0.224 Sum_probs=82.6
Q ss_pred hHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHH---HHHHhh--hhhcch-hHHHHHHHHHH
Q 019567 10 AKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLS---TLLTPW--AATHST-ASLLAVRAFFG 83 (339)
Q Consensus 10 ~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~---~~~~~~--~~~~~~-~~~~~~r~l~G 83 (339)
--+|-+..+.+.+.+.+..|.++|+.+++++.++.-++.. .+-..+..++ ..+... ...... ..++..-++.+
T Consensus 43 ~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~-~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~ 121 (521)
T PRK03612 43 YLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFV-AVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLIG 121 (521)
T ss_pred HHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3467777888999999999999999999988754333322 2211111111 111100 001111 12233445667
Q ss_pred hhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhh-hhccchHHHHHHHHHHHHHH
Q 019567 84 LAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIML-STIGISGPFILFSSLGLLWL 152 (339)
Q Consensus 84 ~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~-~~~~w~~~f~~~~~~~~~~~ 152 (339)
+..|...|....+..+.. .++-++..|-......+|.++|.++.+++. ..+|-....++.+.+.++..
T Consensus 122 ~l~G~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a 190 (521)
T PRK03612 122 LLIGMEIPLLMRILQRIR-DQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAA 190 (521)
T ss_pred HHHHHHHHHHHHHHHhcc-ccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 777777777777665533 234566778888888899999988876654 45665444444444444433
No 265
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=97.19 E-value=0.041 Score=49.54 Aligned_cols=67 Identities=10% Similarity=-0.037 Sum_probs=46.9
Q ss_pred HHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccchhhHhhHHhHHHHHHHHhhhhhhhHHHHH
Q 019567 194 RHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIK 265 (339)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~ 265 (339)
.+++|.|++..+.+.....-.++.........-+.| .|++-++.+.+..+ ..+.+++.|+++.|+.+
T Consensus 272 ~~ilkLp~V~~li~ilL~~KigF~a~da~T~LKLlE-kG~~KE~LAl~~li----~~P~qii~~~~~~Kws~ 338 (544)
T PF13000_consen 272 WKILKLPNVQTLIIILLTAKIGFQANDAVTSLKLLE-KGLSKEDLALLVLI----DFPFQIILPYYIGKWSA 338 (544)
T ss_pred HHHHcCchHHHHHHHHHHHHhccccchhhhHHHHHH-cCCCHHHhHHHHHH----hhhHHHHHHHHhhhhhc
Confidence 456777888888877777777776666666666777 59998887766544 55666666777666654
No 266
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.15 E-value=0.00069 Score=64.31 Aligned_cols=71 Identities=13% Similarity=0.026 Sum_probs=51.6
Q ss_pred HHHHHHHhhhhhhhhhhCCccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhc
Q 019567 215 GYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNY 294 (339)
Q Consensus 215 ~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (339)
...+.....-.-++++++++..+.|++.+...++..++.++.+++.||.+|+ +.+..+.++.+++.+++..
T Consensus 47 ~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~---------~~i~~g~ll~~lg~ll~al 117 (633)
T TIGR00805 47 LYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRP---------IVIGIGCAIMGLGSFLLSL 117 (633)
T ss_pred HHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcc---------eEEEecHHHHHHHHHHHhC
Confidence 3334443333445666999999999999999999999999999999999876 4445555565555555443
No 267
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=97.08 E-value=0.0032 Score=42.14 Aligned_cols=78 Identities=15% Similarity=0.233 Sum_probs=60.5
Q ss_pred HHHHHHHHHhhhhhhhhhhCCccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhh
Q 019567 213 NWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCL 292 (339)
Q Consensus 213 ~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (339)
..+-+.+...+|...+| .++|.++.+++.+...++..+|.+...++.++.++ ...+..+.+...+.....
T Consensus 5 GigRFayTplLP~M~~~-~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~---------~~~~~~~l~~~~~~~~~m 74 (85)
T PF06779_consen 5 GIGRFAYTPLLPLMQAD-GGLSLSQAGWLASANYLGYLVGALLASRLPRHSRP---------RRLLRAGLLLTVLSTAAM 74 (85)
T ss_pred hhHHHHHHhHhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccH---------HHHHHHHHHHHHHHHHHH
Confidence 34556677788877766 69999999999999999999999999888876443 356667777777777777
Q ss_pred hcccchhH
Q 019567 293 NYAKSPAV 300 (339)
Q Consensus 293 ~~~~~~~~ 300 (339)
.+.++.+.
T Consensus 75 a~~~~~~~ 82 (85)
T PF06779_consen 75 ALTHSFWL 82 (85)
T ss_pred HHHhchHH
Confidence 77665543
No 268
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=97.05 E-value=0.0015 Score=57.78 Aligned_cols=121 Identities=9% Similarity=0.016 Sum_probs=80.6
Q ss_pred HHHHHhhHHHHHHHHHhhhhhhhhhhCCccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhh
Q 019567 206 IIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGP 285 (339)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 285 (339)
.+...+...-.+......+. .++.+|.++...|++.....+..++++++.|++.||+.|+ +++..+..+-
T Consensus 39 ~~vnlmny~Dr~~iagv~~~-v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~---------~v~~vG~~iW 108 (493)
T KOG1330|consen 39 CLVNLMNYADRYTIAGVLKE-VQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRK---------RVIAVGIFIW 108 (493)
T ss_pred HHHHHHHHhhhhhhhhhhHH-HHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcc---------eEEeeHHHHH
Confidence 33334343333433333332 3455899999999999999999999999999999999865 7778888888
Q ss_pred hhHhhhhhcccchhHHHHHHHHHHHHhhhcccchhhhhh--hcccchhhhhhh
Q 019567 286 GVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQ--IAQDFSTALQIQ 336 (339)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~~g~~~g~ 336 (339)
.++.+...+....|...++=.+.+..-....+...+... ...++|+.+.+.
T Consensus 109 ~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~i 161 (493)
T KOG1330|consen 109 TLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGI 161 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHH
Confidence 888888777755555444433333333344444444444 444677877764
No 269
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=96.98 E-value=0.088 Score=47.64 Aligned_cols=52 Identities=19% Similarity=0.175 Sum_probs=34.0
Q ss_pred chhHHHHHHHHHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhH
Q 019567 71 STASLLAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLL 127 (339)
Q Consensus 71 ~~~~~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l 127 (339)
.++..++.-++.|++.+........+.+. +|++ .++.+..+.+++++++.++
T Consensus 105 ~f~~~~~~v~~~g~~~~~~q~s~~gla~~-fp~~----~~~a~~~G~g~aGv~~s~~ 156 (437)
T TIGR00939 105 FFVTTMASVVIINSGMALLQGSLFGLAGV-FPST----YSSAVMSGQGLAGVLTSLA 156 (437)
T ss_pred HHHHHHHHHHHHHhhhhhhcccchhhccc-CCHH----HHHHHHhcchhHHHHHHHH
Confidence 45666777788899988887777777664 5644 3445555566665555544
No 270
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.83 E-value=0.028 Score=50.65 Aligned_cols=100 Identities=15% Similarity=0.199 Sum_probs=74.0
Q ss_pred HHHHHHHhhhHHHh---hhhcchHHHHHHHHHHHHHHHHHhhh----------------hhcchhHHHHHHHHHHhhhhc
Q 019567 28 WGYIFSSVIGGALV---DKYGGKKVLAWGVALWSLSTLLTPWA----------------ATHSTASLLAVRAFFGLAEGV 88 (339)
Q Consensus 28 ~~~~i~~~~~g~l~---dr~G~r~~l~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~r~l~G~g~~~ 88 (339)
++..++..+.+.+. +|+||++.+.++..+..++.++.-+. +.+++....+.-++.|++.+.
T Consensus 290 ~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~ 369 (461)
T KOG3098|consen 290 LGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDAC 369 (461)
T ss_pred HHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHH
Confidence 33344444455555 46799999999999988888876221 112456777888999999999
Q ss_pred chhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHH
Q 019567 89 AMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLT 128 (339)
Q Consensus 89 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~ 128 (339)
.....+.++++.+ +++|..+.++...-..++..++-...
T Consensus 370 ~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~ 408 (461)
T KOG3098|consen 370 FNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFS 408 (461)
T ss_pred HHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhh
Confidence 9999999999999 58888888888777777766655444
No 271
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=96.48 E-value=0.17 Score=44.58 Aligned_cols=33 Identities=24% Similarity=0.304 Sum_probs=21.5
Q ss_pred hhHHHHHHHHHHhhhhcchhhhHHHHhhhCCcch
Q 019567 72 TASLLAVRAFFGLAEGVAMPAMSTLTSRWFPSHE 105 (339)
Q Consensus 72 ~~~~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~ 105 (339)
+...++.-.+.+.+.|..........++ +|+|.
T Consensus 117 f~vt~~~vv~~~~a~a~~qgs~~G~a~~-~P~~y 149 (406)
T KOG1479|consen 117 FLVTLIIVVLLNLANAVVQGSLYGLAGL-FPSEY 149 (406)
T ss_pred HHHHHHHHHHHhhhhhhhccchhhhhhc-CCHHH
Confidence 4555666777888877766666666555 55554
No 272
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=96.30 E-value=0.047 Score=47.17 Aligned_cols=37 Identities=16% Similarity=0.234 Sum_probs=34.4
Q ss_pred hhCCccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHh
Q 019567 230 VFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKA 266 (339)
Q Consensus 230 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~ 266 (339)
.+|++.++.+.++........+...+.|.++||+|||
T Consensus 63 ~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk 99 (354)
T PF05631_consen 63 SYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRK 99 (354)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCch
Confidence 4899999999999999999999999999999999986
No 273
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.22 E-value=0.015 Score=51.52 Aligned_cols=149 Identities=13% Similarity=0.100 Sum_probs=89.3
Q ss_pred CCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcc-hHHHHHHHHHHHHHHHHHhh-h-hhcchhHHHHHHHHHHhhhhcc
Q 019567 13 GWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGG-KKVLAWGVALWSLSTLLTPW-A-ATHSTASLLAVRAFFGLAEGVA 89 (339)
Q Consensus 13 ~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~-r~~l~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~r~l~G~g~~~~ 89 (339)
|.+....|++.....++..+++...|.+.||... |.++.+......++...... . .....+.+...-.+.|.+....
T Consensus 297 gY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~ 376 (480)
T KOG2563|consen 297 GYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGY 376 (480)
T ss_pred cCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCC
Confidence 4455688999999999999999999999999865 55555555555555322110 0 1123355666677788887888
Q ss_pred hhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhcc---chHH-HHHHHHHHHHHHHHHHhhccC
Q 019567 90 MPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIG---ISGP-FILFSSLGLLWLSTWTSKVTN 161 (339)
Q Consensus 90 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~---w~~~-f~~~~~~~~~~~~~~~~~~~~ 161 (339)
.|...-+-.|..-|..-+.-.|+.+....+=..+-...-+...+..+ |..+ -+.....+++..++..++.|+
T Consensus 377 ~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~ 452 (480)
T KOG2563|consen 377 LPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPD 452 (480)
T ss_pred CCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhh
Confidence 89888887776644444555566555444444444445555555554 3332 233333333334444444343
No 274
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=95.68 E-value=0.13 Score=45.56 Aligned_cols=112 Identities=16% Similarity=0.129 Sum_probs=77.7
Q ss_pred cchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHH--HHHHHHHHHhh-hhhcchhHHHHHHHHHHhhhhcchhhh
Q 019567 17 SFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVA--LWSLSTLLTPW-AATHSTASLLAVRAFFGLAEGVAMPAM 93 (339)
Q Consensus 17 ~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~r~l~G~g~~~~~~~~ 93 (339)
++..+....|.+|-.++.--...+ |+ |+..+.+.+ +-.+..++.++ -+.++.|..++.-+..|+..|..+...
T Consensus 281 ~~Y~~Y~~~YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNt 356 (402)
T PF02487_consen 281 DQYRWYQLLYQLGVFISRSSLPFF--RI--RRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNT 356 (402)
T ss_pred HHHHHHHHHHHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHH
Confidence 455666667776665554322111 33 333333322 22222222211 235788888899999999999999999
Q ss_pred HHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhh
Q 019567 94 STLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIML 132 (339)
Q Consensus 94 ~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~ 132 (339)
...+.|-.|+++|..++|..+.+-++|..++..++-.+-
T Consensus 357 F~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le 395 (402)
T PF02487_consen 357 FYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLE 395 (402)
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998886654
No 275
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=95.47 E-value=0.82 Score=39.15 Aligned_cols=74 Identities=18% Similarity=0.140 Sum_probs=57.2
Q ss_pred HHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhCC
Q 019567 26 FLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGVAMPAMSTLTSRWFP 102 (339)
Q Consensus 26 ~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~~~~~~~~~~~i~~~~~ 102 (339)
..+..+.+.++.+.+..++|-|+++.++.......-..- .-+.+..++-.-...|+|.+..+..--+++++.-.
T Consensus 67 ~y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~N---l~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~ 140 (390)
T KOG3097|consen 67 LYLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIAAN---LEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQ 140 (390)
T ss_pred hhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhh---cchhHHhhccHHHhhccccccccccCcceecHHHH
Confidence 344556677777799999999999999888876644332 24678889999999999999998888777766553
No 276
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=95.40 E-value=0.47 Score=42.76 Aligned_cols=121 Identities=17% Similarity=0.091 Sum_probs=89.9
Q ss_pred HhHhCCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhh-hh---c----chhHHHHHHH
Q 019567 9 AAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWA-AT---H----STASLLAVRA 80 (339)
Q Consensus 9 ~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~-~~---~----~~~~~~~~r~ 80 (339)
.++-|+++..+|..-+.-.+....+.+...++.+|+|..|.-..+...-.+...++... +. + +...++.+-.
T Consensus 285 l~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~ 364 (432)
T PF06963_consen 285 LKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIA 364 (432)
T ss_pred HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHH
Confidence 33449999999999999999999999999999999999988888766443333332111 11 1 3344455555
Q ss_pred HHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHH
Q 019567 81 FFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTP 129 (339)
Q Consensus 81 l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~ 129 (339)
+.-+|.=.......-++.|..|+++||...|.-....++-.++-..++-
T Consensus 365 ~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~i 413 (432)
T PF06963_consen 365 LSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTI 413 (432)
T ss_pred HHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 5555655667778889999999999999999999988887777666653
No 277
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=95.36 E-value=0.19 Score=42.51 Aligned_cols=137 Identities=16% Similarity=0.128 Sum_probs=81.8
Q ss_pred HHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhh
Q 019567 21 IVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGVAMPAMSTLTSRW 100 (339)
Q Consensus 21 ~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~~~~~~~~~~~i~~~ 100 (339)
.+.-+-.+...+..+......||+---.=..+..++.+.+..+. +++++.++-+.+-.+..++.|.-...-..+-+ .
T Consensus 66 ~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lV--afs~s~~~sL~GV~~aSissGlGEiTFL~lss-~ 142 (409)
T KOG3880|consen 66 AVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLV--AFSNSVPMSLLGVVFASISSGLGEITFLALSS-R 142 (409)
T ss_pred hhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEE--EeccchhHHHhhhhhhhhcCCcceeehhhhhc-c
Confidence 33333344455566666677888643322334445666667777 56888998888888888887765444444332 2
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhh--ccchHHHHHHHHHHHHHHHHHHhhccCCCC
Q 019567 101 FPSHERASAIGICMGGFHLGNVVGLLLTPIMLST--IGISGPFILFSSLGLLWLSTWTSKVTNDPC 164 (339)
Q Consensus 101 ~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~--~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~ 164 (339)
+++ ...+-++.+.+.++++|..--..+.+. .+-|...++...+.++.+...++.+++++.
T Consensus 143 Y~~----~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~pes 204 (409)
T KOG3880|consen 143 YPS----IVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSPES 204 (409)
T ss_pred CCC----ceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCCcc
Confidence 332 234455566666666666555555553 346777777777766666666655554443
No 278
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=93.87 E-value=0.033 Score=49.47 Aligned_cols=89 Identities=20% Similarity=0.165 Sum_probs=65.1
Q ss_pred HHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHH
Q 019567 202 SWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIG 281 (339)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 281 (339)
........+...+.+..=.+++|+|+++ .|.+....+......-+.+.+.+++.|..+||-..|.-+ ||..+..+
T Consensus 34 li~v~~ia~Gvqf~wA~elsy~tPyl~~-lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GR----RRPfI~~~ 108 (498)
T KOG0637|consen 34 LISVASIAAGVQFGWALELSYLTPYLQS-LGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGR----RRPFILAG 108 (498)
T ss_pred HHHHHHHHHHHHHHHHHHhccccHHHHH-cCCCcccccccccccccccceeccccccccccccccccc----ccchHHHh
Confidence 4444555566666777778999999999 699999999998888899999999999999974332110 34666666
Q ss_pred hhhhhhHhhhhhcc
Q 019567 282 FIGPGVSLLCLNYA 295 (339)
Q Consensus 282 ~~~~~~~~~~~~~~ 295 (339)
.....+.+.++.+.
T Consensus 109 s~~i~~~l~Lig~a 122 (498)
T KOG0637|consen 109 SLLIAVSLFLIGYA 122 (498)
T ss_pred hHHHHHHHhhhhhH
Confidence 66666666666554
No 279
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=92.94 E-value=0.13 Score=46.57 Aligned_cols=109 Identities=13% Similarity=0.046 Sum_probs=66.8
Q ss_pred HHHHHHHHHhhHHHHHHHHHhhhhhhhh-hhCCccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHH
Q 019567 202 SWTVIIANITNNWGYFVLLSWMPIYFNT-VFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSI 280 (339)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 280 (339)
.+...+..++....+.....-.-+|+++ ..+-+.+..|+..+...++..+++++.|+...|.+.. |+-++.
T Consensus 36 i~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~--------k~Pli~ 107 (488)
T KOG2325|consen 36 IYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSV--------KKPLIV 107 (488)
T ss_pred HHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCc--------ccCHHH
Confidence 3444444555544444444444456665 2366777889999999999999999999999987753 244566
Q ss_pred HhhhhhhHhhhhh-cc--cchhHHHHHHHHHHHHhhhcccchh
Q 019567 281 GFIGPGVSLLCLN-YA--KSPAVAAVLITIALSLSSFSQAGYL 320 (339)
Q Consensus 281 ~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (339)
+.+++.++.+++. .. ++. ....++++-.+.|+..+...
T Consensus 108 s~ii~~~g~llY~~l~~~~~~--~~y~mL~~R~l~Gvg~~n~a 148 (488)
T KOG2325|consen 108 SFLIAIIGNLLYLALAYVPNG--VKYLMLVARILTGVGVGNFA 148 (488)
T ss_pred HHHHHHHHHHHHHHHHhcccc--hHHHHHHHHHHcCcCcccHH
Confidence 7777777776663 22 232 22234445555555544433
No 280
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=91.89 E-value=1.2 Score=41.53 Aligned_cols=77 Identities=9% Similarity=0.098 Sum_probs=37.0
Q ss_pred CCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccchhhHhhHHhHHHHHHHHhhhhhhhHHHHH
Q 019567 188 RNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIK 265 (339)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~ 265 (339)
..+..-.|++|.|+-..+ +..+...+............+.-..-.++...|.+....-+.-++.+.++|+.+-|+-+
T Consensus 246 GWKlvhgDVFR~P~~~~l-ls~lvG~G~Qll~~~~~~~~~a~~g~~~~~~rg~l~t~~i~~y~~~~~iaGy~S~~~yk 322 (521)
T PF02990_consen 246 GWKLVHGDVFRPPKHPML-LSALVGTGIQLLFMALVTLFFAALGFLSPNNRGSLLTAAIILYALTSFIAGYVSARLYK 322 (521)
T ss_pred chhhhhHHHhcCcCCchH-HHhHhcchhhhhHHHHHHHHHHHhhhccccCcchHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 334445788888764322 22222222222222333333333222355555555555555556666677777766654
No 281
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=91.40 E-value=4.8 Score=33.77 Aligned_cols=136 Identities=13% Similarity=0.152 Sum_probs=84.3
Q ss_pred hhHHHHHHHHHHHHHHhhhHHHhhhhcch--HHHHHHHHHHHHHHHHHhhh--hhc---chhHHHHHHHHHHhhhhcchh
Q 019567 19 LGIVQSSFLWGYIFSSVIGGALVDKYGGK--KVLAWGVALWSLSTLLTPWA--ATH---STASLLAVRAFFGLAEGVAMP 91 (339)
Q Consensus 19 ~g~~~s~~~~~~~i~~~~~g~l~dr~G~r--~~l~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~r~l~G~g~~~~~~ 91 (339)
-|.+.+.++++..+++-+..++..|-..| ..+.+..++..+...+.-+. .++ +...-+++-.+.-.+.|..+|
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwP 363 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWP 363 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcch
Confidence 48999999999999999999988876554 45555554444433332111 112 222335556666677899999
Q ss_pred hhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHH
Q 019567 92 AMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLST 154 (339)
Q Consensus 92 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~ 154 (339)
..+.+=+++.|++.|...+.++..-.++=..++-..-..=....+-|..|-++.+...+..+.
T Consensus 364 SimkmRsqyIPEearstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~~~~~a~i~ 426 (454)
T KOG4332|consen 364 SIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAFLFVASIL 426 (454)
T ss_pred HHHHHHHhhCCHHHHhhhhhheechhhHhhhhhheecccccCccccchhhhhhHHHHHHHHHH
Confidence 999999999999999999988766555422221100000000124566777766665554433
No 282
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=91.01 E-value=5.7 Score=30.30 Aligned_cols=86 Identities=10% Similarity=0.025 Sum_probs=49.2
Q ss_pred HhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhcccchhHHHHHHHHHHHHhhhcccch
Q 019567 240 WFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGY 319 (339)
Q Consensus 240 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (339)
.-.++......+..++.+.+.+++|.| +.+.++.++..+-...... ++.+......++.+...+..+.+.
T Consensus 41 ~slai~Y~~~~~s~l~~P~iv~~lg~K---------~sm~lg~~~y~~y~~~~~~-~~~~~l~~~s~l~G~~~a~lW~aq 110 (156)
T PF05978_consen 41 YSLAILYGSFAISCLFAPSIVNKLGPK---------WSMILGSLGYAIYIASFFY-PNSYTLYPASALLGFGAALLWTAQ 110 (156)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhhH---------HHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHhhhhHHhhHhh
Confidence 344556666778888899999999976 6666666666655555433 344444444444444455555544
Q ss_pred hhhhh--hcccchhhhhh
Q 019567 320 LLNIQ--IAQDFSTALQI 335 (339)
Q Consensus 320 ~~~~~--~~p~~~g~~~g 335 (339)
..... ..++.+++-.+
T Consensus 111 g~ylt~~s~~~~~~~~~~ 128 (156)
T PF05978_consen 111 GTYLTSYSTEETIGRNTG 128 (156)
T ss_pred hHHHHHcCCHHHHhhHHH
Confidence 44444 33344444333
No 283
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=90.03 E-value=1.9 Score=41.40 Aligned_cols=72 Identities=10% Similarity=0.020 Sum_probs=51.5
Q ss_pred HHHHHHHhhhhhhhhhhCCccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhc
Q 019567 215 GYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNY 294 (339)
Q Consensus 215 ~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (339)
++|++...+..|+.+.+|++...+..+...+....-+..+++|+++|++-.+ .+.+..+.++..++..++..
T Consensus 2 syYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~--------~~tIl~~~ii~~lG~~llai 73 (654)
T TIGR00926 2 SYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGK--------FKTILYLSIVYVVGHALLSF 73 (654)
T ss_pred ceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--------HHHHHHHHHHHHHHHHHHHh
Confidence 4566677788888888899998888888888888888889999999975443 24444445555555555443
No 284
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=89.08 E-value=4.8 Score=35.42 Aligned_cols=122 Identities=14% Similarity=0.173 Sum_probs=69.0
Q ss_pred HHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhh----h-h-----cchhHHHHHHHHHHhhhhc--chhhhHHH
Q 019567 29 GYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWA----A-T-----HSTASLLAVRAFFGLAEGV--AMPAMSTL 96 (339)
Q Consensus 29 ~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~----~-~-----~~~~~~~~~r~l~G~g~~~--~~~~~~~~ 96 (339)
...+..++.|...|+..|+|++...+++--++.+.++-. + . .+...+..+-++.-.-.+. ....+.++
T Consensus 75 s~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~~i 154 (503)
T KOG2601|consen 75 SQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVIVAGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAGTI 154 (503)
T ss_pred HHHhhHHHHHHHhcchhHHHHHHHHHhhccHHHHHHHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhheE
Confidence 456778888999999999999988876654444443211 1 1 2455555555444332222 12222222
Q ss_pred --HhhhC----CcchhhHHH---HHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHH
Q 019567 97 --TSRWF----PSHERASAI---GICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLL 150 (339)
Q Consensus 97 --i~~~~----~~~~r~~~~---~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~ 150 (339)
-.||. ..+.+.... +.....-..-..+.|.+.+.+.+..+-|..-...++-.++
T Consensus 155 ~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn~Lapv~tg~Iitfvsl~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 155 LIERDWVVVMSEGESPSVLTNMNATIRGIDQSTNLLAPVITGLIITFVSLRASAGTFAAWALV 217 (503)
T ss_pred EecccEEEEecCCCCHHHHhhcchhhhhhhhhhhchhhhhhcccceeechhhhhhhhHHHHHH
Confidence 23332 223344444 4444444455778899999998887777755544444444
No 285
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=89.04 E-value=6.8 Score=32.54 Aligned_cols=25 Identities=12% Similarity=-0.226 Sum_probs=14.3
Q ss_pred HHHHHhhHHHHHHHHHhhhhhhhhh
Q 019567 206 IIANITNNWGYFVLLSWMPIYFNTV 230 (339)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~l~~~ 230 (339)
.+.........++.+..=..|.+++
T Consensus 184 G~~LAv~aGvlyGs~fvPv~Yi~~~ 208 (254)
T PF07857_consen 184 GIILAVFAGVLYGSNFVPVIYIQDH 208 (254)
T ss_pred hHHHHHHHHHHHhcccchHHHHHhC
Confidence 3444444555666666666677764
No 286
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=88.20 E-value=5.6 Score=33.19 Aligned_cols=49 Identities=14% Similarity=0.174 Sum_probs=34.4
Q ss_pred HHHHHhhhhhhhhhhCCcc--chhhHhhHHhHHHHHHHHhhhhhhhHHHHHh
Q 019567 217 FVLLSWMPIYFNTVFNVNL--KQAAWFSAVPWGTMAVSGYMAGKASDSLIKA 266 (339)
Q Consensus 217 ~~~~~~~~~~l~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~ 266 (339)
.......+.+..+ .+.+. ...+.......+...++.++.|++.||.|+|
T Consensus 19 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~ 69 (338)
T COG0477 19 GLLSPALPLLLST-LSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRR 69 (338)
T ss_pred chHHHHHHHHHHH-cCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccch
Confidence 3344455555555 34444 3677888888888888889999999999665
No 287
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=88.10 E-value=7.4 Score=35.42 Aligned_cols=62 Identities=21% Similarity=0.281 Sum_probs=53.5
Q ss_pred cchhHHHHHHHHHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHh
Q 019567 70 HSTASLLAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIM 131 (339)
Q Consensus 70 ~~~~~~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l 131 (339)
++-+..++.-++.|+..|.....++.+..+..++++|..+-.+...+..+|..+|..++-.+
T Consensus 370 ~~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~~ 431 (437)
T TIGR00939 370 PGDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFLF 431 (437)
T ss_pred cccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35566778899999999999999999999999999999999999999999999998876443
No 288
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=87.75 E-value=5.1 Score=34.94 Aligned_cols=134 Identities=17% Similarity=0.078 Sum_probs=88.7
Q ss_pred hHHHHHHHHHHHHHHhhhHHHhhhhcchHHHH--HHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHhhhhcchhhhHHHH
Q 019567 20 GIVQSSFLWGYIFSSVIGGALVDKYGGKKVLA--WGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGVAMPAMSTLT 97 (339)
Q Consensus 20 g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~~~~~~~~~~~i 97 (339)
|..-++..+..+++.+..|.+--++.|..-++ ++.+.-+...+++ +.+++.|..+++.++.+.-.....+.+..-+
T Consensus 274 G~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m--~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~i 351 (433)
T KOG3810|consen 274 GAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIM--AQTQHIWVCYAGYVLFRVIYQLTITIATFQI 351 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhh--hcccceehhhhhHHHHHhhHhhhhhHHHHHH
Confidence 56667777888899999999988887764333 3444444444445 5678999999999999888888889999999
Q ss_pred hhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhcc-----------chHHHHHHHHHHHHHHHHHHhh
Q 019567 98 SRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIG-----------ISGPFILFSSLGLLWLSTWTSK 158 (339)
Q Consensus 98 ~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~-----------w~~~f~~~~~~~~~~~~~~~~~ 158 (339)
++..+++.-|..+|+.....- ++=.++.....|.-| +-.-|.+.+.+.++........
T Consensus 352 A~nL~~e~~gLvFGiNTFvAl---~lQsilT~iVvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~~~~ 420 (433)
T KOG3810|consen 352 ARNLSSELFGLVFGINTFVAL---ILQSILTLIVVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIEYLM 420 (433)
T ss_pred HHhhhhhhheeeeehHHHHHH---HHHHhheEEEEcccccCCCcceeEEEEeehHHHHHHHHHHHHHHHHHH
Confidence 999888888888887554332 232333333333211 2334666666666654444333
No 289
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=85.71 E-value=29 Score=31.96 Aligned_cols=70 Identities=16% Similarity=0.160 Sum_probs=53.0
Q ss_pred HHhhhhcchhhhHHHHhhhCCc-chhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHH
Q 019567 82 FGLAEGVAMPAMSTLTSRWFPS-HERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLW 151 (339)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~ 151 (339)
.|+........--..+.+.+|. ++|...+|-.+...++.+.+..++++.+.+.+||...-.+.-++.++.
T Consensus 276 y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~a~i~Pii~lit 346 (472)
T TIGR00769 276 YGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLTAALITPLVMLLT 346 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 4555555555566677888864 578999999999888888777777799999999999887766665553
No 290
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=85.62 E-value=0.067 Score=43.88 Aligned_cols=65 Identities=3% Similarity=0.059 Sum_probs=48.2
Q ss_pred CccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccchhhHhhHHhHHHHHHHHh
Q 019567 190 PPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGY 254 (339)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 254 (339)
+.+|..-+++-.++.+.+.+.+.-........|++.|..+...++.+.-+++..+..+.....+.
T Consensus 191 Rm~W~~WF~~v~~YQiAllYmLsRL~iNiSQaYlaFfviddlqm~qsakAllP~v~Yl~SF~VS~ 255 (412)
T KOG4830|consen 191 RMHWTSWFGHVQFYQIALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKALLPMVAYLSSFSVSM 255 (412)
T ss_pred cccchhhhhhhHHHHHHHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhhhhHHHHHHhhhhHHh
Confidence 44677777777888888888888777777888999999887777777777766666655544443
No 291
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=84.55 E-value=6.8 Score=35.10 Aligned_cols=99 Identities=16% Similarity=0.032 Sum_probs=74.4
Q ss_pred ccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHH--HHHHHHHHHHHhhhhhcchhHHHHHHHHHHhhhhcchhhh
Q 019567 16 SSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWG--VALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGVAMPAM 93 (339)
Q Consensus 16 ~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~~~~~~~~ 93 (339)
..--|.+-++..+..+++++..|++-.++.+-.-+..+ .++.+...+++ ...+|.+..+++-++.+.......+.+
T Consensus 284 ~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm--~~t~~Iwv~Y~~yIif~~~y~fliTiA 361 (412)
T PF01770_consen 284 SVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLM--SFTGNIWVCYAGYIIFRSLYMFLITIA 361 (412)
T ss_pred cccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHH--HHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33458888899999999999999997777764444433 33334444445 558999999999999998888888888
Q ss_pred HHHHhhhCCcchhhHHHHHHHHH
Q 019567 94 STLTSRWFPSHERASAIGICMGG 116 (339)
Q Consensus 94 ~~~i~~~~~~~~r~~~~~~~~~~ 116 (339)
..-++....+++-+..+|+....
T Consensus 362 ~~qIA~~l~~e~yaLVFGiNtf~ 384 (412)
T PF01770_consen 362 SFQIAKNLSEERYALVFGINTFV 384 (412)
T ss_pred HHHHHHhccccceeeeeeeHHHH
Confidence 88888888777777777775443
No 292
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=84.26 E-value=2.7 Score=40.41 Aligned_cols=127 Identities=18% Similarity=0.220 Sum_probs=86.4
Q ss_pred hhHhHhCCCccchhHHHHHHHH-HHHHHHhhhHHHhhhh--cchHHHHHHHHHHHHHHHHHh-hh---------------
Q 019567 7 PLAAKFGWSSSFLGIVQSSFLW-GYIFSSVIGGALVDKY--GGKKVLAWGVALWSLSTLLTP-WA--------------- 67 (339)
Q Consensus 7 ~i~~~~~~s~~~~g~~~s~~~~-~~~i~~~~~g~l~dr~--G~r~~l~~~~~~~~~~~~~~~-~~--------------- 67 (339)
.++++|+.+.+++..+.+...+ +.++|.+++|++..|+ ..|.+....+++..+..+... ..
T Consensus 418 yLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l~l~~~~~~~~igC~~~~~aG~~~~ 497 (735)
T KOG3626|consen 418 YLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVLSLLFYSLLFFIGCESSPVAGVTNS 497 (735)
T ss_pred HHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHHHHHHHHHHHEecCCCCcccceecC
Confidence 4778899999999998875554 5578888999999987 445555555555444444310 00
Q ss_pred ----------------------------------------------------h------------hc-------------
Q 019567 68 ----------------------------------------------------A------------TH------------- 70 (339)
Q Consensus 68 ----------------------------------------------------~------------~~------------- 70 (339)
. .+
T Consensus 498 y~~~~~~~~~~~~~s~Cn~~C~C~~~~~~PVCg~~G~tY~SpChAGC~~~~~~~~~~~~ytnCsCv~~~~~~~~~a~~G~ 577 (735)
T KOG3626|consen 498 YEGSPAFTSHENPFSSCNSDCSCDTSEYEPVCGENGITYFSPCHAGCTESSGTSDGNTIYTNCSCVPTNKNGNGSAKKGY 577 (735)
T ss_pred CCCCCccccCCCchhhhhcCCCCCCcCcCcccCCCCCEEeChhhhCCcccccCCCCceeeccccccccccCCCceeecCC
Confidence 0 11
Q ss_pred -------chhHHHHHHHHHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHH-HHHHHHHhHHHHhhh
Q 019567 71 -------STASLLAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFH-LGNVVGLLLTPIMLS 133 (339)
Q Consensus 71 -------~~~~~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~-~g~~~~~~l~~~l~~ 133 (339)
.+..+++.-++.-+..+...++.+.++-+..++|+|..++|+..+... +|.+=+|++-|+++|
T Consensus 578 C~~~c~~~~~~Fl~~~~~~sf~~~~~~~p~~~i~LR~V~~e~ks~AlG~~~~~irllg~IPsPIifG~~ID 648 (735)
T KOG3626|consen 578 CPNDCCRQFLIFLALFAIGSFIGALGAVPGMLIVLRCVPPEEKSFALGFQWMLIRLLGFIPSPIIFGAVID 648 (735)
T ss_pred CCCCcchhhHHHHHHHHHHHHHHHhccCcceEEEEEccCchhchhhhHHHHHHHHHHhcCCchHhhhhhHh
Confidence 123344444444444455556677777888899999999999877665 688889999999887
No 293
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=81.94 E-value=0.39 Score=41.38 Aligned_cols=19 Identities=5% Similarity=-0.144 Sum_probs=0.0
Q ss_pred hhHHhHHHHHHHHhhhhhh
Q 019567 241 FSAVPWGTMAVSGYMAGKA 259 (339)
Q Consensus 241 ~~~~~~~~~~~~~~~~g~l 259 (339)
.+..++++..+|+.+.++.
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~ 205 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWP 205 (309)
T ss_dssp -------------------
T ss_pred HHHHHHHHHHhcchhccee
Confidence 4567788888898877764
No 294
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=79.94 E-value=0.56 Score=43.82 Aligned_cols=77 Identities=10% Similarity=-0.066 Sum_probs=0.0
Q ss_pred HHHhhHHHHHHHHHhhhhhhhhhhCCccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhh
Q 019567 208 ANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGV 287 (339)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (339)
..+.+ ....++....-+-++++++++..++|.+.+..-++..+..++..++.+|..|. +.+..+.++.++
T Consensus 11 ~~~~q-~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrp---------rwig~g~~~~~~ 80 (539)
T PF03137_consen 11 LGLFQ-MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRP---------RWIGIGALLMGL 80 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHH-HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCc---------ceeeecHHHHHH
Confidence 33334 44444444444456777999999999999999999999998888888775432 555677777777
Q ss_pred Hhhhhhc
Q 019567 288 SLLCLNY 294 (339)
Q Consensus 288 ~~~~~~~ 294 (339)
+.+++..
T Consensus 81 g~~l~~l 87 (539)
T PF03137_consen 81 GSLLFAL 87 (539)
T ss_dssp -------
T ss_pred HHHHHhc
Confidence 7766654
No 295
>KOG1278 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=79.87 E-value=2.9 Score=38.28 Aligned_cols=34 Identities=18% Similarity=0.172 Sum_probs=23.4
Q ss_pred CccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHh
Q 019567 233 VNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKA 266 (339)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~ 266 (339)
++++.-|.+.+..-+.-++.++++|+.+.|+.+.
T Consensus 356 lSPs~RGsLmT~~~~l~v~~G~~agY~s~rlyk~ 389 (628)
T KOG1278|consen 356 LSPSSRGSLMTAMVLLFVFMGFVAGYVSARLYKT 389 (628)
T ss_pred CCccccccHHHHHHHHHHHHHHhhhhhhhhhHhh
Confidence 4666666666666666677777788887776543
No 296
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=77.98 E-value=13 Score=31.98 Aligned_cols=65 Identities=18% Similarity=0.042 Sum_probs=55.0
Q ss_pred hhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHh
Q 019567 67 AATHSTASLLAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIM 131 (339)
Q Consensus 67 ~~~~~~~~~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l 131 (339)
.+.++++...+.-+..|+-.|..+....--+.+-.++++|-.+++....+-++|..++..++-.+
T Consensus 337 ~ftpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 337 WFTPSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred HhccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 45889998888899999988888888877777777889999999999999999998888776444
No 297
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=75.52 E-value=23 Score=31.58 Aligned_cols=63 Identities=11% Similarity=0.096 Sum_probs=38.1
Q ss_pred hhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccchhhHhhHHhHHHHHHHHhhhhhhhH-----HHHHh
Q 019567 200 LPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASD-----SLIKA 266 (339)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-----~~~~~ 266 (339)
+++..+...+..+...+.... .+|..++. .|.|-++.+.......= ---.+++..+.| |+|||
T Consensus 31 ~~illLl~LYllQGiP~GL~~-~iP~lL~a-k~vSyt~~a~fS~ay~P--~sLKllWaPiVDs~y~k~~Grr 98 (510)
T KOG3574|consen 31 SSILLLLFLYLLQGIPLGLIG-AIPLLLQA-KGVSYTSQAIFSFAYWP--FSLKLLWAPIVDSVYSKRFGRR 98 (510)
T ss_pred hhHHHHHHHHHHcCCchhHhh-hhHHHhcC-CCcchhhhhhhhhhhhH--HHHHHHHHhhhHHHHHHhhccc
Confidence 456666666777766665544 88888885 47776665544332211 122356666777 88887
No 298
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=75.26 E-value=31 Score=30.86 Aligned_cols=106 Identities=18% Similarity=0.130 Sum_probs=69.8
Q ss_pred HHHHH-HHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhh-------hhcchhHHHHHHHHHHhhhhcchhh
Q 019567 21 IVQSS-FLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWA-------ATHSTASLLAVRAFFGLAEGVAMPA 92 (339)
Q Consensus 21 ~~~s~-~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~r~l~G~g~~~~~~~ 92 (339)
.+... +.+.-.+|.+...++-++= ||+ +.+..++-.+.--+..+. .-.+-++++..-.+.|+..|-....
T Consensus 286 ~~~~l~fN~~d~vG~~~a~~~~~~~-~r~-l~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGYltsl 363 (406)
T KOG1479|consen 286 LLVFLSFNVFDLIGSILAALLTWPD-PRK-LTIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGYLTSL 363 (406)
T ss_pred HHHHHHhHHHHHhhhhhhhcccCCC-Cce-ehHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccchHhhh
Confidence 44444 6677777755555554443 333 233333322221111101 1345678889999999999999999
Q ss_pred hHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHH
Q 019567 93 MSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLT 128 (339)
Q Consensus 93 ~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~ 128 (339)
.+.+..+-.|++++-.+-.+.......|...|..++
T Consensus 364 ~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s 399 (406)
T KOG1479|consen 364 IMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLS 399 (406)
T ss_pred eehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 999999999888888888888888888888877665
No 299
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=75.00 E-value=72 Score=29.66 Aligned_cols=73 Identities=8% Similarity=0.165 Sum_probs=52.1
Q ss_pred HHhhhhcchhhhHHHHhhhCCc-chhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHH
Q 019567 82 FGLAEGVAMPAMSTLTSRWFPS-HERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLST 154 (339)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~ 154 (339)
.|+........--..+.+.+|. +++...+|-++...++-+.+...+++.+.+.+||+..-.+.-++.++..+.
T Consensus 292 Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~~AlitPiv~lit~~~ 365 (491)
T PF03219_consen 292 YGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTAALITPIVILITGLL 365 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHHHHHHHHHH
Confidence 4455455555556667777864 456778888888888777777788899999999999888765555554433
No 300
>COG3559 TnrB3 Putative exporter of polyketide antibiotics [Cell envelope biogenesis, outer membrane]
Probab=71.75 E-value=77 Score=28.58 Aligned_cols=64 Identities=6% Similarity=-0.132 Sum_probs=32.6
Q ss_pred hhHHHHHHHHHhhHHHHHHHHHhhhhhhhhh----------hCCccchhhHhhHHhHHHHHHHHhhhhhhhHHH
Q 019567 200 LPSWTVIIANITNNWGYFVLLSWMPIYFNTV----------FNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSL 263 (339)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----------~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~ 263 (339)
.......+..+.....+....--+-+++++. .+....+.+++...+.+.+++.....-.+.-|+
T Consensus 298 g~lI~W~v~~fllglvygs~fg~l~~fL~~n~avrqave~~e~ag~le~~Flv~lfsIisil~a~~~V~~vlkl 371 (536)
T COG3559 298 GSLILWTVGLFLLGLVYGSVFGGLGDFLGDNTAVRQAVERMEGAGALEQAFLVLLFSIISILAAAFAVSLVLKL 371 (536)
T ss_pred CccHHHHHHHHHHHHHHHHHhhhhhhhhcCcHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444445555555555555444444444331 133334555666677777766665444444343
No 301
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=69.95 E-value=22 Score=24.91 Aligned_cols=38 Identities=24% Similarity=0.067 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHHhhhHHHhhhh-cchHHHHHHHHHHH
Q 019567 21 IVQSSFLWGYIFSSVIGGALVDKY-GGKKVLAWGVALWS 58 (339)
Q Consensus 21 ~~~s~~~~~~~i~~~~~g~l~dr~-G~r~~l~~~~~~~~ 58 (339)
.-.+.-+++..+-....||+.||| |-++..++..++.+
T Consensus 46 ~klssefIsGilVGa~iG~llD~~agTsPwglIv~lllG 84 (116)
T COG5336 46 FKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLLG 84 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 444555666666777788889987 66665555544433
No 302
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=69.71 E-value=1.7 Score=37.44 Aligned_cols=107 Identities=16% Similarity=0.063 Sum_probs=3.8
Q ss_pred HHHHHHHHHHHHHhhhHHHhhhh-cchHHHHHHHHHHHH---HHHHHhhh--------hhcchhHHHHHHHHHHhhhhcc
Q 019567 22 VQSSFLWGYIFSSVIGGALVDKY-GGKKVLAWGVALWSL---STLLTPWA--------ATHSTASLLAVRAFFGLAEGVA 89 (339)
Q Consensus 22 ~~s~~~~~~~i~~~~~g~l~dr~-G~r~~l~~~~~~~~~---~~~~~~~~--------~~~~~~~~~~~r~l~G~g~~~~ 89 (339)
....|.++-.+|....++.--+- .+|+.. +..+.-.+ ..++|-.- .-+|-+..++.-++.|+..|-.
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~-~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl 265 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPRWLW-ILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYL 265 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccccHH-HHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchh
Confidence 44567777777777666532111 234433 33222221 11222000 1234466778889999999999
Q ss_pred hhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHH
Q 019567 90 MPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTP 129 (339)
Q Consensus 90 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~ 129 (339)
.+..+.+..+..++++|..+-.+...+..+|..+|..++-
T Consensus 266 ~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~ 305 (309)
T PF01733_consen 266 STLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSF 305 (309)
T ss_dssp -HHHH-----------------------------------
T ss_pred hhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988888888898888887764
No 303
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=68.65 E-value=59 Score=26.04 Aligned_cols=36 Identities=17% Similarity=0.232 Sum_probs=21.8
Q ss_pred chhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchH
Q 019567 104 HERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISG 139 (339)
Q Consensus 104 ~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~ 139 (339)
|++.+.-.......-++..+|..+++.+.+..+.+.
T Consensus 158 ~~~~~~~~~~~~~~i~~f~~Ga~~ga~l~~~~~~~a 193 (209)
T PF06912_consen 158 KDRALRRALRYLLIILSFFIGAILGALLYRRLGFWA 193 (209)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 333333444555556667777777778877777433
No 304
>PRK03612 spermidine synthase; Provisional
Probab=67.85 E-value=1.1e+02 Score=28.85 Aligned_cols=54 Identities=7% Similarity=-0.084 Sum_probs=34.7
Q ss_pred HHhhHHHHHHHHHhhhhhhhhhhCCccchhhHhhHHhHHHHHHHHhhhhhhhHH
Q 019567 209 NITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDS 262 (339)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~ 262 (339)
.++..+.....-......+...+|.+....+.+.+++..+..+|+.+++++.++
T Consensus 23 ~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~ 76 (521)
T PRK03612 23 VFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRD 76 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 333344444444444455555578788888888888878888888777776543
No 305
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=67.34 E-value=57 Score=27.72 Aligned_cols=37 Identities=19% Similarity=0.134 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHhhhhc
Q 019567 51 AWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGV 88 (339)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~~~ 88 (339)
+.+.+++++++++..+ ..++.+.+.+.-++.+++.++
T Consensus 3 ~~~~~~~~~~s~~~~l-~~~~~~l~~~~~~~~~F~~~m 39 (284)
T PF12805_consen 3 IATLLCFALASLLVGL-LFPYPWLLILVLALLTFFFGM 39 (284)
T ss_pred HHHHHHHHHHHHHHHH-HhhccHHHHHHHHHHHHHHHH
Confidence 4455556555555533 245555555555666555443
No 306
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=65.09 E-value=36 Score=32.26 Aligned_cols=63 Identities=13% Similarity=0.093 Sum_probs=55.3
Q ss_pred chhHHHHHHHHHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhh
Q 019567 71 STASLLAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLS 133 (339)
Q Consensus 71 ~~~~~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~ 133 (339)
|..+++--.++.|++.........-.--+-+|++-|+.+++++....++|..+...+......
T Consensus 457 Si~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l~t~a~G~~lss~Lv~~v~~ 519 (571)
T KOG1237|consen 457 SILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWLLTVAVGNYLSSVLVSLVQF 519 (571)
T ss_pred eHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567788889999999999888888888888999999999999999999999999988866544
No 307
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=63.13 E-value=96 Score=26.45 Aligned_cols=82 Identities=16% Similarity=0.100 Sum_probs=44.3
Q ss_pred HHHHHHHHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccc--hHHHH--HHHHHHHH
Q 019567 75 LLAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGI--SGPFI--LFSSLGLL 150 (339)
Q Consensus 75 ~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w--~~~f~--~~~~~~~~ 150 (339)
--..|.+.|+-. ..+.+++++++-.||++++-...--.....+++.++-|+++ .+.+...| +..-+ ..+++.++
T Consensus 22 ~~~lr~~~g~~~-vlf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g-~~l~~~~~~i~~~~i~~~l~~~t~~ 99 (287)
T PF07760_consen 22 IPPLRVILGFPF-VLFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIG-LLLNYTPWGIRLIPILISLSIFTLV 99 (287)
T ss_pred hhHHHHHHHHHH-HHHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHH-HHHHhccCCcchhHHHHHHHHHHHH
Confidence 456788888864 35577999999999865443333333334444445555555 34343333 33322 33444444
Q ss_pred HHHHHHhh
Q 019567 151 WLSTWTSK 158 (339)
Q Consensus 151 ~~~~~~~~ 158 (339)
..++....
T Consensus 100 ~~~~a~~r 107 (287)
T PF07760_consen 100 LSIIAYIR 107 (287)
T ss_pred HHHHHHHh
Confidence 44444443
No 308
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=60.52 E-value=84 Score=29.21 Aligned_cols=65 Identities=8% Similarity=0.045 Sum_probs=47.4
Q ss_pred HHHHHHHHHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccch
Q 019567 74 SLLAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGIS 138 (339)
Q Consensus 74 ~~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~ 138 (339)
.+++.-++.-+..-..+....+.-++..+|.--|..|.+.+...++|+-.-..+.-++.+.+.++
T Consensus 407 lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~fT~~ 471 (544)
T PF13000_consen 407 LVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDYFTVA 471 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhhcccc
Confidence 34455666677777778888888899999999999999999999988655554544555544443
No 309
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=59.91 E-value=49 Score=25.08 Aligned_cols=82 Identities=15% Similarity=0.112 Sum_probs=49.4
Q ss_pred HHhhhhcchHHHHHHHHHH-HHHHHHHhhh-------hhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhCCcchhhHHH
Q 019567 39 ALVDKYGGKKVLAWGVALW-SLSTLLTPWA-------ATHSTASLLAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAI 110 (339)
Q Consensus 39 ~l~dr~G~r~~l~~~~~~~-~~~~~~~~~~-------~~~~~~~~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~ 110 (339)
.++||.-||..+..|.-.. +++.+...+. -.+++..+++.-.+.|+|.- ...+.+++.-.++++.|..+
T Consensus 56 ~Vs~RM~rRm~~~~GiP~~lG~~~f~~~y~l~~~~~~dvP~~~~~~~S~~~Fg~gll---GisYGilSaSWD~~r~GSll 132 (153)
T PF11947_consen 56 VVSNRMLRRMAVFVGIPTALGVAVFVVFYYLKSRQIVDVPPWAVLLVSLVFFGLGLL---GISYGILSASWDPEREGSLL 132 (153)
T ss_pred HHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHhccccccCchHHHHHHHHHHHHHHH---hhhhhhcccccCCCCCCCcc
Confidence 4677886666655554222 1222211111 12445566666666666643 45677777777888899999
Q ss_pred HHHHHHHHHHHHH
Q 019567 111 GICMGGFHLGNVV 123 (339)
Q Consensus 111 ~~~~~~~~~g~~~ 123 (339)
|+-.+-.+++-+.
T Consensus 133 G~~e~~~N~~r~~ 145 (153)
T PF11947_consen 133 GWEEFKRNWGRMW 145 (153)
T ss_pred cHHHHHHhHHHHH
Confidence 9988888876554
No 310
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=59.18 E-value=29 Score=24.33 Aligned_cols=50 Identities=20% Similarity=0.198 Sum_probs=41.7
Q ss_pred CccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHH
Q 019567 15 SSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLT 64 (339)
Q Consensus 15 s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~ 64 (339)
.++..|=..++|.-.+.+.++.+++..|+.-+.+.=.+|..+..++..+.
T Consensus 52 ~p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI 101 (107)
T PF02694_consen 52 QPAAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAII 101 (107)
T ss_pred CcccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHhe
Confidence 34677889999999999999999999999988777777777777766654
No 311
>PF05255 UPF0220: Uncharacterised protein family (UPF0220); InterPro: IPR007919 This family of proteins is functionally uncharacterised.
Probab=55.71 E-value=94 Score=24.01 Aligned_cols=57 Identities=16% Similarity=0.137 Sum_probs=31.6
Q ss_pred hCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhc------cchHHHHHHHHHHHHHHHHHH
Q 019567 100 WFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTI------GISGPFILFSSLGLLWLSTWT 156 (339)
Q Consensus 100 ~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~------~w~~~f~~~~~~~~~~~~~~~ 156 (339)
.+|.+++.+..+.+.++.-.+...--.+=+.+.... .+...+++.++.+.+.+++.-
T Consensus 14 ~~~~~~~~~~~~~~~AGaLF~~gwWi~iDa~v~s~~~~~~~~~~~f~~~ipgI~stlgm~mvN 76 (166)
T PF05255_consen 14 WFDWSEKRNAIGSYVAGALFALGWWIFIDAAVYSKHANGSDVHVTFVDWIPGIFSTLGMFMVN 76 (166)
T ss_pred CCCchHhHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCCccccceeeehHHHHHHHHHHhc
Confidence 445556666666655555444444333333333222 477788888887777655443
No 312
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=54.24 E-value=1.3e+02 Score=29.48 Aligned_cols=56 Identities=14% Similarity=0.102 Sum_probs=34.9
Q ss_pred HHHhhhHHHhhh----hcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHhhhhc
Q 019567 32 FSSVIGGALVDK----YGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGV 88 (339)
Q Consensus 32 i~~~~~g~l~dr----~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~~~ 88 (339)
..+.+.+-+.|. -||.+-+.++.++++++++...+. .+..+.+...-++.+++.++
T Consensus 38 ~lG~ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll-~~~p~~~~~~l~~~tf~~~m 97 (701)
T TIGR01667 38 CLGIIAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLL-FPKPWLFPFLLTLLTFGFIL 97 (701)
T ss_pred HHhhHhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHH-hcchHHHHHHHHHHHHHHHH
Confidence 344455566663 366788889999999888887442 34445555555555555443
No 313
>PF00909 Ammonium_transp: Ammonium Transporter Family; InterPro: IPR024041 This ammonium transporter domain consists of a duplication of 2 structural repeats of five helices each plus one extra C-terminal helix. It has been described as a channel that spans the membrane 11 times [].; PDB: 3B9Z_A 3B9Y_A 3B9W_A 3BHS_A 2B2H_A 2B2J_A 2B2F_A 2B2I_A 2NPG_A 2NUU_E ....
Probab=53.30 E-value=1.6e+02 Score=26.53 Aligned_cols=53 Identities=11% Similarity=0.029 Sum_probs=31.9
Q ss_pred HHHHHHHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHH
Q 019567 76 LAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLT 128 (339)
Q Consensus 76 ~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~ 128 (339)
-..-++.|+..|.........+.+..+-++---+.+++..+.-.|.+..++.+
T Consensus 274 p~~A~~iG~iag~i~~~~~~~l~~~~~iDD~~~~~~vHg~~Gi~G~i~~glfa 326 (399)
T PF00909_consen 274 PWGALLIGAIAGLISYFGVSWLLKRLKIDDPVGAFAVHGVGGIWGTILTGLFA 326 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTS-HTTGHHHHCHHHHHHHHHHHHHHC
T ss_pred HHHHHHhhhhHhhhhhhheecccceeEeccccceEeeeeccHHHHHHHHHHHh
Confidence 34455666665555455554555666556666677887777777766666553
No 314
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=53.24 E-value=1.6e+02 Score=28.92 Aligned_cols=55 Identities=15% Similarity=0.074 Sum_probs=34.3
Q ss_pred HHhhhHHHhhh----hcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHhhhhc
Q 019567 33 SSVIGGALVDK----YGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGV 88 (339)
Q Consensus 33 ~~~~~g~l~dr----~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~~~ 88 (339)
.+.+.+.++|. -||.+-+.++.+++.++++...+ ..+..+.+..+-++..++.++
T Consensus 39 LG~ia~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~l-l~~~p~lf~~~l~~~tf~~~m 97 (704)
T TIGR01666 39 LGIIAAALVDLDDRLTGRLKNVIFTLICFSIASFSVEL-LFGKPWLFAVGLTVSTFGFIM 97 (704)
T ss_pred HHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHH-HhcCcHHHHHHHHHHHHHHHH
Confidence 34445567773 46777888888888888887644 234455555555555555443
No 315
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=52.92 E-value=1.2e+02 Score=28.42 Aligned_cols=33 Identities=12% Similarity=0.023 Sum_probs=24.9
Q ss_pred chhhHhhHHhHHHHHHHHhhhhhhhHHHHHhcc
Q 019567 236 KQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGY 268 (339)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~ 268 (339)
...........+.+.+++..++++-..++.++.
T Consensus 297 ~l~t~~i~~y~~~~~iaGy~S~~~yk~~~g~~W 329 (521)
T PF02990_consen 297 SLLTAAIILYALTSFIAGYVSARLYKSFGGKKW 329 (521)
T ss_pred hHHHHHHHHHHHHhhHHHHHHHHHHHHcCCCce
Confidence 344445557778889999999999999987643
No 316
>PRK02237 hypothetical protein; Provisional
Probab=52.70 E-value=53 Score=23.11 Aligned_cols=48 Identities=17% Similarity=0.091 Sum_probs=39.7
Q ss_pred cchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHH
Q 019567 17 SFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLT 64 (339)
Q Consensus 17 ~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~ 64 (339)
++.|=..++|.-.+.+.++.+++..|+.-+-+.=.+|..+..++..+.
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI 103 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVI 103 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHh
Confidence 558889999999999999999999999987777777777776666554
No 317
>KOG1277 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=52.51 E-value=25 Score=31.64 Aligned_cols=12 Identities=0% Similarity=-0.150 Sum_probs=6.3
Q ss_pred ccHHHHhcchhH
Q 019567 191 PSLRHLLSKLPS 202 (339)
Q Consensus 191 ~~~~~~~~~~~~ 202 (339)
..-.+++|.|.-
T Consensus 280 ~vHgDVFR~p~~ 291 (593)
T KOG1277|consen 280 QVHGDVFRFPSH 291 (593)
T ss_pred eeecccccCCCc
Confidence 334566765543
No 318
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=52.24 E-value=1.4e+02 Score=24.96 Aligned_cols=17 Identities=18% Similarity=0.114 Sum_probs=8.7
Q ss_pred cchHHHHHHHHHHHHHH
Q 019567 136 GISGPFILFSSLGLLWL 152 (339)
Q Consensus 136 ~w~~~f~~~~~~~~~~~ 152 (339)
.-++..++.+++-++..
T Consensus 128 pr~~T~~~~t~LF~iFG 144 (294)
T KOG2881|consen 128 PRKYTYYLATALFLIFG 144 (294)
T ss_pred hHHHHHHHHHHHHHHHH
Confidence 34555666555544433
No 319
>COG4769 Predicted membrane protein [Function unknown]
Probab=51.35 E-value=32 Score=26.24 Aligned_cols=53 Identities=15% Similarity=0.158 Sum_probs=36.4
Q ss_pred HHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHhh
Q 019567 25 SFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLA 85 (339)
Q Consensus 25 ~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g 85 (339)
.+..+.++.+...-++..++|+|..-.++.-++ - ++.+|..++++.+++.+-.
T Consensus 81 l~sfaG~i~S~L~m~~l~~f~~k~~S~lgiS~m------G--aF~hNl~QLivas~Lv~~~ 133 (181)
T COG4769 81 LYSFAGAILSTLFMYFLYQFGPKYLSLLGISVM------G--AFTHNLGQLIVASFLVFTT 133 (181)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCceEeeeehhhH------H--HHHHhHHHHHHHHHHHhcc
Confidence 445556677777778889999888644443221 2 3468999999999888754
No 320
>TIGR00836 amt ammonium transporter. The mechanism of energy coupling, if any, to methyl-NH2 or NH3 uptake by the AmtB protein of E. coli is not entirely clear. NH4+ uniport driven by the pmf, energy independent NH3 facilitation, and NH4+/K+ antiport have been proposed as possible transport mechanisms. In Corynebacterium glutamicum and Arabidopsis thaliana, uptake via the Amt1 homologues of AmtB has been reported to be driven by the pmf.
Probab=50.99 E-value=1.8e+02 Score=26.28 Aligned_cols=51 Identities=16% Similarity=0.092 Sum_probs=30.7
Q ss_pred HHHHHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHH
Q 019567 78 VRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLT 128 (339)
Q Consensus 78 ~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~ 128 (339)
.-++.|+..+........++.+..+-++---+..++..+.-+|.+..++.+
T Consensus 281 ~A~viG~iag~~~~~~~~~l~~~~~iDD~~~~~~vHg~~Gi~G~i~~glfa 331 (403)
T TIGR00836 281 GAIIIGLVAGVLCYLAVSKLKKKLKIDDPLDAFAVHGVGGIWGLIATGLFA 331 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCCcccchhhhhhHHHHHHHHHHhc
Confidence 345556655555555555555665555555577777777777766666554
No 321
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=50.05 E-value=1.3e+02 Score=25.27 Aligned_cols=101 Identities=14% Similarity=0.092 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHHHHhhhHHHhhh-hcchHHHH----HHHHHHHHHHHHHhhhhh----cchhHHHHHHHHHHhhhhcchh
Q 019567 21 IVQSSFLWGYIFSSVIGGALVDK-YGGKKVLA----WGVALWSLSTLLTPWAAT----HSTASLLAVRAFFGLAEGVAMP 91 (339)
Q Consensus 21 ~~~s~~~~~~~i~~~~~g~l~dr-~G~r~~l~----~~~~~~~~~~~~~~~~~~----~~~~~~~~~r~l~G~g~~~~~~ 91 (339)
...-.+..|..+|.+..|.+... +.||+.+. .+.+.+.++.+. ++... .+...+++.-++.|+..=+..+
T Consensus 145 ~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~-~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ 223 (267)
T PF07672_consen 145 IFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVV-VYFVGPGNAAGFAFFYIFGFLAGFFLWGIQG 223 (267)
T ss_pred HHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHH-HHHhCcchHHHHHHHHHHHHHHHHHHHhhhH
Confidence 33445666666777777877764 45666544 223333333333 21111 1356677888888876533333
Q ss_pred hhHHHHhhhCCcchhhHHHHHHHHHHHHHHHH
Q 019567 92 AMSTLTSRWFPSHERASAIGICMGGFHLGNVV 123 (339)
Q Consensus 92 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~ 123 (339)
+.. .+.+-+++.++.+.--.++..+++|.+.
T Consensus 224 ViL-~lPhEyK~~~pk~ig~~Fg~iWGfGY~~ 254 (267)
T PF07672_consen 224 VIL-NLPHEYKGYNPKKIGIQFGLIWGFGYIF 254 (267)
T ss_pred HHh-cChhhhcCCCcceehhHHHHHHHHHHHH
Confidence 322 2333333333333333344456665444
No 322
>TIGR03644 marine_trans_1 probable ammonium transporter, marine subtype. Members of this protein family are well conserved subclass of putative ammonimum transporters, belonging to the much broader set of ammonium/methylammonium transporter described by TIGR00836. Species with this transporter tend to be marine bacteria. Partial phylogenetic profiling (PPP) picks a member of this protein family as the single best-scoring protein vs. a reference profile for the marine environment Genome Property for a large number of different query genomes. This finding by PPP suggests that this transporter family represents an important adaptation to the marine environment.
Probab=50.03 E-value=2e+02 Score=26.04 Aligned_cols=49 Identities=16% Similarity=0.106 Sum_probs=27.5
Q ss_pred HHHHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHH
Q 019567 79 RAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLT 128 (339)
Q Consensus 79 r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~ 128 (339)
-++.|+-.+........++ |..+-++---+......+...|.+..++..
T Consensus 296 A~iiG~iag~v~~~~~~~~-~~~~iDD~~~~~~vHg~~Gi~G~i~~glf~ 344 (404)
T TIGR03644 296 ATLIGAVGGVIVVFSIVLL-DKLKIDDPVGAISVHGVAGIWGTLVVPITN 344 (404)
T ss_pred HHHHHHHHHHHHHHHHHHH-HhCCCCCCcCchHhhhHHHHHHHHHHHHhc
Confidence 3444554454444444444 445445555667777776666666666554
No 323
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=49.98 E-value=81 Score=23.81 Aligned_cols=25 Identities=20% Similarity=0.526 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHhhhHHHhhhhcchH
Q 019567 24 SSFLWGYIFSSVIGGALVDKYGGKK 48 (339)
Q Consensus 24 s~~~~~~~i~~~~~g~l~dr~G~r~ 48 (339)
.-|.+++.+.+.+.|++.||..+++
T Consensus 60 gGyl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 60 GGYLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred ChHHHHHHHHHHHHHHHHHhccccc
Confidence 4677888999999999999988764
No 324
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=46.72 E-value=1.5e+02 Score=26.59 Aligned_cols=65 Identities=15% Similarity=0.198 Sum_probs=43.5
Q ss_pred HHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHhc
Q 019567 203 WTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAG 267 (339)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~ 267 (339)
..+.+.+++..++.-...+....|+.+..|-+....+....+-+...++...+.|...|+..|.+
T Consensus 30 i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~K 94 (503)
T KOG2601|consen 30 IFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVK 94 (503)
T ss_pred ehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHH
Confidence 34556677777777777777777887765655555555555555556666667788888887764
No 325
>PRK10720 uracil transporter; Provisional
Probab=46.35 E-value=2.3e+02 Score=25.81 Aligned_cols=54 Identities=13% Similarity=-0.023 Sum_probs=22.3
Q ss_pred hhcchHHHHHHHHHHHHHHHHHhh-hhhcchhHHHHHHHHHHhhhhcchhhhHHHH
Q 019567 43 KYGGKKVLAWGVALWSLSTLLTPW-AATHSTASLLAVRAFFGLAEGVAMPAMSTLT 97 (339)
Q Consensus 43 r~G~r~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~r~l~G~g~~~~~~~~~~~i 97 (339)
|...|++...+.++..+..+.-.+ +.-.+.+.-..+-... ...+.........+
T Consensus 298 ~v~sr~v~~~a~~~li~lg~~pk~~a~ia~iP~pVlgg~~i-~~fg~i~~~Gi~~l 352 (428)
T PRK10720 298 RVYSTWVIGGAAIIAILLSCVGKLAAAIQAIPLPVMGGVSL-LLYGVIGASGIRVL 352 (428)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 344566556454444444441111 1223333333333333 33344444455555
No 326
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=46.01 E-value=34 Score=24.08 Aligned_cols=32 Identities=16% Similarity=0.088 Sum_probs=23.8
Q ss_pred hhhccchHHHHHHHHHHHHHHHHHHhhccCCC
Q 019567 132 LSTIGISGPFILFSSLGLLWLSTWTSKVTNDP 163 (339)
Q Consensus 132 ~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~ 163 (339)
.+..+|+.+|++...++++.+.+.+.+.||..
T Consensus 54 ~d~e~we~~~f~~~~~~~v~~~~~~~y~PD~~ 85 (105)
T PF10183_consen 54 RDWEGWELPFFFGFSGSLVFGGVFLAYKPDTS 85 (105)
T ss_pred chHhhhHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 34568999999987777777777777766654
No 327
>PF03596 Cad: Cadmium resistance transporter; InterPro: IPR004676 These proteins are members of the Cadmium Resistance (CadD) Family. To date, this family of proteins has only been found in Gram-positive bacteria. The CadD family includes two close orthologues in two Staphylococcus species that have been reported to function in cadmium resistance, and another staphylococcal protein that has been reported to possibly function in quaternary ammonium ion export.
Probab=45.65 E-value=1.5e+02 Score=23.50 Aligned_cols=10 Identities=10% Similarity=0.577 Sum_probs=5.9
Q ss_pred HHHhhhhhhh
Q 019567 219 LLSWMPIYFN 228 (339)
Q Consensus 219 ~~~~~~~~l~ 228 (339)
...|.|.+.+
T Consensus 113 igIYiP~Fa~ 122 (191)
T PF03596_consen 113 IGIYIPLFAS 122 (191)
T ss_pred EEEeehhhhc
Confidence 3467776643
No 328
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=45.46 E-value=52 Score=23.15 Aligned_cols=23 Identities=13% Similarity=0.017 Sum_probs=15.7
Q ss_pred HhHHHHHHHHhhhhhhhHHHHHh
Q 019567 244 VPWGTMAVSGYMAGKASDSLIKA 266 (339)
Q Consensus 244 ~~~~~~~~~~~~~g~l~d~~~~~ 266 (339)
.-.+.+++.....||+.||+-..
T Consensus 50 sefIsGilVGa~iG~llD~~agT 72 (116)
T COG5336 50 SEFISGILVGAGIGWLLDKFAGT 72 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCC
Confidence 33455666667789999987543
No 329
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=44.68 E-value=93 Score=24.50 Aligned_cols=23 Identities=26% Similarity=0.551 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHhhhHHHhhhhcc
Q 019567 24 SSFLWGYIFSSVIGGALVDKYGG 46 (339)
Q Consensus 24 s~~~~~~~i~~~~~g~l~dr~G~ 46 (339)
.-|.+++.+.+.+.|++.||.-+
T Consensus 89 gGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 89 GGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhc
Confidence 46788999999999999999985
No 330
>PRK02935 hypothetical protein; Provisional
Probab=38.89 E-value=1.3e+02 Score=21.00 Aligned_cols=37 Identities=22% Similarity=0.319 Sum_probs=20.8
Q ss_pred HHHHHHHHhhhhhhHhhhhhcccchhHHHHHHHHHHH
Q 019567 274 RKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALS 310 (339)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (339)
|.+-+...++..++.++.+.+..+.+...++++++..
T Consensus 13 Rt~aL~lvfiG~~vMy~Giff~~~~~~m~ifm~~G~l 49 (110)
T PRK02935 13 RTFALSLVFIGFIVMYLGIFFRESIIIMTIFMLLGFL 49 (110)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHH
Confidence 5555666666666666666665555554444444433
No 331
>PF13386 DsbD_2: Cytochrome C biogenesis protein transmembrane region
Probab=38.86 E-value=2e+02 Score=22.84 Aligned_cols=34 Identities=12% Similarity=-0.124 Sum_probs=27.6
Q ss_pred CccchhhHhhHHhHHHHHHHHhhhhhhhHHHHHh
Q 019567 233 VNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKA 266 (339)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~ 266 (339)
-|+.+.......++++.++.-+..+...++.+++
T Consensus 147 ~s~~~G~l~m~~FgLGT~p~ll~~~~~~~~l~~~ 180 (199)
T PF13386_consen 147 GSPLYGALLMLAFGLGTLPALLLAGLLAGKLSRR 180 (199)
T ss_pred CChHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 3677788888899999988888888888887654
No 332
>PRK13629 threonine/serine transporter TdcC; Provisional
Probab=38.47 E-value=3.2e+02 Score=25.11 Aligned_cols=44 Identities=14% Similarity=0.117 Sum_probs=27.4
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHH
Q 019567 103 SHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLW 151 (339)
Q Consensus 103 ~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~ 151 (339)
+++.+...++.++..+.|...-|...+. +|-++..+..+++...
T Consensus 19 ~~d~~W~l~l~GTAIGAGmLfLPI~~g~-----~Gf~p~lillll~~p~ 62 (443)
T PRK13629 19 KSDTTWTLGLFGTAIGAGVLFFPIRAGF-----GGLIPILLMLVLAYPI 62 (443)
T ss_pred cccchHHHHHHHHHHhHHHHHHHHHHhc-----chHHHHHHHHHHHHHH
Confidence 4556777778777777777777765542 3556655555554443
No 333
>PF03706 UPF0104: Uncharacterised protein family (UPF0104); InterPro: IPR022791 This family of proteins are integral membrane proteins. These proteins are uncharacterised but contain a conserved PG motif. Some members of this family are annotated as dolichol-P-glucose synthetase and contain a PF00535 from PFAM domain. This entry also contains proteins of unknown function that are involved in the addition of lysine to phosphatidylglycerol (lysylphosphatidylglycerol synthetase, L-PG synthase). L-PG synthase produces lysyl-phosphatidylglycerol (L-PG), the major component of the bacterial membrane and responsible for its positive charge. L-PG synthesis contributes to bacterial virulence as it is involved in the cationic antimicrobial peptides (CAMP) resistance mechanism of the host's immune system (defensins, cathelicidins) and of the competing microorganisms (bacteriocins).
Probab=37.41 E-value=2.5e+02 Score=23.59 Aligned_cols=51 Identities=12% Similarity=0.117 Sum_probs=32.6
Q ss_pred CCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHH
Q 019567 13 GWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLL 63 (339)
Q Consensus 13 ~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~ 63 (339)
+.+............+.+.+-..-+-.+.++.|.|..+.-..-....+...
T Consensus 23 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 73 (294)
T PF03706_consen 23 SANPWWLLLALLLSLLSYVLRALRWRLLLRRLGHRISFRDALRISFIGFFL 73 (294)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHH
Confidence 455555566666777777777778888888877666655554444444443
No 334
>PF04024 PspC: PspC domain; InterPro: IPR007168 This domain is found in Phage shock protein C (PspC) that is thought to be a transcriptional regulator. The presumed domain is 60 amino acid residues in length.
Probab=37.33 E-value=1e+02 Score=19.14 Aligned_cols=27 Identities=11% Similarity=0.217 Sum_probs=14.2
Q ss_pred chHHHHHHHHHH---HHHHHHHHhhccCCC
Q 019567 137 ISGPFILFSSLG---LLWLSTWTSKVTNDP 163 (339)
Q Consensus 137 w~~~f~~~~~~~---~~~~~~~~~~~~~~~ 163 (339)
+|..|.+..... ++.=+..++..|++|
T Consensus 31 vRl~~v~l~~~~~~~~l~Y~~~w~~lP~~~ 60 (61)
T PF04024_consen 31 VRLIFVVLTFFTGGGILLYLILWLLLPKEP 60 (61)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHcCCCC
Confidence 466666655432 233344555667665
No 335
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=36.79 E-value=18 Score=26.62 Aligned_cols=14 Identities=7% Similarity=0.040 Sum_probs=6.6
Q ss_pred hHHHHHHHHHHHHH
Q 019567 138 SGPFILFSSLGLLW 151 (339)
Q Consensus 138 ~~~f~~~~~~~~~~ 151 (339)
||+++++.++.+++
T Consensus 1 RW~l~~iii~~i~l 14 (130)
T PF12273_consen 1 RWVLFAIIIVAILL 14 (130)
T ss_pred CeeeHHHHHHHHHH
Confidence 45555544444433
No 336
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=35.65 E-value=3.2e+02 Score=24.25 Aligned_cols=15 Identities=33% Similarity=0.740 Sum_probs=7.7
Q ss_pred HHHHhhhHHHhhhhc
Q 019567 31 IFSSVIGGALVDKYG 45 (339)
Q Consensus 31 ~i~~~~~g~l~dr~G 45 (339)
.+.....|++..|+|
T Consensus 9 i~~ii~~G~~~~~~~ 23 (385)
T PF03547_consen 9 IFLIILLGYLLGRFG 23 (385)
T ss_pred HHHHHHHHHHHHHhC
Confidence 344445556665553
No 337
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=33.88 E-value=95 Score=23.59 Aligned_cols=14 Identities=14% Similarity=-0.047 Sum_probs=9.6
Q ss_pred hcccchhhhhhhhc
Q 019567 325 IAQDFSTALQIQQE 338 (339)
Q Consensus 325 ~~p~~~g~~~g~q~ 338 (339)
-.|+..|...|.+|
T Consensus 123 WD~~r~GSllG~~e 136 (153)
T PF11947_consen 123 WDPEREGSLLGWEE 136 (153)
T ss_pred cCCCCCCCcccHHH
Confidence 56677777777654
No 338
>PF11023 DUF2614: Protein of unknown function (DUF2614); InterPro: IPR020912 This entry describes proteins of unknown function, which are thought to be membrane proteins.; GO: 0005887 integral to plasma membrane
Probab=32.13 E-value=1.7e+02 Score=20.86 Aligned_cols=35 Identities=23% Similarity=0.407 Sum_probs=18.4
Q ss_pred HHHHHHHHhhhhhhHhhhhhcccchhHHHHHHHHH
Q 019567 274 RKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIA 308 (339)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (339)
|.+-+...++..++.+..+.+.++.+...++++++
T Consensus 12 R~~al~lif~g~~vmy~gi~f~~~~~im~ifmllG 46 (114)
T PF11023_consen 12 RTFALSLIFIGMIVMYIGIFFKASPIIMVIFMLLG 46 (114)
T ss_pred HHHHHHHHHHHHHHHhhhhhhcccHHHHHHHHHHH
Confidence 55555555555555555555555555444444444
No 339
>PRK10666 ammonium transporter; Provisional
Probab=31.83 E-value=4e+02 Score=24.34 Aligned_cols=50 Identities=16% Similarity=0.246 Sum_probs=27.6
Q ss_pred HHHHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHH
Q 019567 79 RAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLT 128 (339)
Q Consensus 79 r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~ 128 (339)
-++.|+-.|........++.+.+.-++---+.+.+..+.-+|.+..++.+
T Consensus 306 A~iiG~vag~v~~~~~~~l~~~~~iDD~~~a~~vHgv~Gi~G~l~~glfa 355 (428)
T PRK10666 306 ALIIGVVAGLAGLWGVTMLKRWLRVDDPCDVFGVHGVCGIVGCILTGIFA 355 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCcCccHhhhHhHHHHHHHHHHhh
Confidence 44555554544444445555545445555566676666666666655554
No 340
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=31.07 E-value=3.9e+02 Score=23.91 Aligned_cols=142 Identities=17% Similarity=0.163 Sum_probs=79.9
Q ss_pred CCCccchhHHHHHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHH-------HHhhhhhcchhHHHHHHHHHHhh
Q 019567 13 GWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTL-------LTPWAATHSTASLLAVRAFFGLA 85 (339)
Q Consensus 13 ~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~r~l~G~g 85 (339)
|-+-.|.+.+.+.|..+..+|+...-++.|.--.-+.+..-.++-.++.+ .+++-..++.+.+++.-++.|.-
T Consensus 39 G~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~L 118 (508)
T COG4262 39 GGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIGVL 118 (508)
T ss_pred CCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHHHH
Confidence 34456888999999999999999888887754333333222222222211 11111234667888889999999
Q ss_pred hhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHh-hhhccchHHHHHHHHHHHHHHHHHH
Q 019567 86 EGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIM-LSTIGISGPFILFSSLGLLWLSTWT 156 (339)
Q Consensus 86 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l-~~~~~w~~~f~~~~~~~~~~~~~~~ 156 (339)
.|...|..+.++.+-.. +-....+.....-.+|...+.++-.++ ....|-.-.-...+...++.++...
T Consensus 119 VG~EiPL~mrml~~r~a--~~k~~~s~vl~~DYLGal~~gLl~p~lllP~LGl~rta~laG~~Nl~aAvv~~ 188 (508)
T COG4262 119 VGAEIPLLMRMLQRRQA--KAKDLGSRVLTLDYLGALAGGLLWPFLLLPRLGLVRTAALAGLCNLAAAVVTL 188 (508)
T ss_pred HhcchHHHHHHHHHHHH--HHHhhhhhhhhhHhhhhhhHHHHHHHHHhhhhccHHHHHHHHHHHHHHHHHHH
Confidence 99999999998877221 111111222222556666665554443 3444532222334555555444333
No 341
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=31.00 E-value=1.3e+02 Score=18.41 Aligned_cols=39 Identities=21% Similarity=0.280 Sum_probs=24.0
Q ss_pred HHHHHHHHhHHHHhhhhccchHHHHHHHHHHHHHHHHHH
Q 019567 118 HLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWT 156 (339)
Q Consensus 118 ~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~~~~~~~ 156 (339)
-+|.+++...+..-...++++..-.+..+.+++...+..
T Consensus 12 il~~vvgyI~ssL~~~~~n~~~~~Ii~vi~~i~~~~~~~ 50 (57)
T PF11151_consen 12 ILGEVVGYIGSSLTGVTYNFTTAAIIAVIFGIIVANIIA 50 (57)
T ss_pred HHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHH
Confidence 345666666665555567777776666666665555444
No 342
>PF02667 SCFA_trans: Short chain fatty acid transporter; InterPro: IPR006160 Members of this family may be short chain fatty acid transporters although there has been no experimental characterisation of this function.
Probab=30.71 E-value=2.7e+02 Score=25.55 Aligned_cols=9 Identities=0% Similarity=-0.341 Sum_probs=3.8
Q ss_pred HHHhhccCC
Q 019567 154 TWTSKVTND 162 (339)
Q Consensus 154 ~~~~~~~~~ 162 (339)
+.+...|++
T Consensus 207 i~~~m~P~~ 215 (453)
T PF02667_consen 207 INYLMAPKP 215 (453)
T ss_pred HHHHhCCCC
Confidence 334444443
No 343
>PRK00293 dipZ thiol:disulfide interchange protein precursor; Provisional
Probab=30.58 E-value=4.9e+02 Score=24.90 Aligned_cols=30 Identities=10% Similarity=-0.064 Sum_probs=16.1
Q ss_pred ccchhhHhhHHhHHHHHHHHhhhhhhhHHH
Q 019567 234 NLKQAAWFSAVPWGTMAVSGYMAGKASDSL 263 (339)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~ 263 (339)
++...+..+..++++..+--++.+....|+
T Consensus 323 ~~~~g~~~l~~~gLG~~~Plll~~~~~~~~ 352 (571)
T PRK00293 323 DLLLGGLTLYLLALGMGLPLILITTFGNKL 352 (571)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 444555566666666644444445444443
No 344
>PRK12489 anaerobic C4-dicarboxylate transporter; Reviewed
Probab=30.26 E-value=4.4e+02 Score=24.26 Aligned_cols=12 Identities=8% Similarity=0.185 Sum_probs=5.5
Q ss_pred HHHHHHHHHHHH
Q 019567 109 AIGICMGGFHLG 120 (339)
Q Consensus 109 ~~~~~~~~~~~g 120 (339)
.++....+..+|
T Consensus 130 pLa~as~As~lG 141 (443)
T PRK12489 130 PMAAASVASQMG 141 (443)
T ss_pred hHHHHHHHHHHH
Confidence 344444444444
No 345
>PF10101 DUF2339: Predicted membrane protein (DUF2339); InterPro: IPR019286 This entry, found in various hypothetical bacterial proteins, has no known function.
Probab=29.61 E-value=5.6e+02 Score=25.30 Aligned_cols=107 Identities=15% Similarity=0.099 Sum_probs=55.5
Q ss_pred hcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhCCcchhhHHHHHHHHHHHHHHHH
Q 019567 44 YGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVV 123 (339)
Q Consensus 44 ~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~ 123 (339)
+|.|+..-+|.+...+|....-=...++-+.=-..|+..|...|. .....+|+..+|+ -+..+..-.+.+++...
T Consensus 1 ig~n~l~~iG~~~l~lG~~fl~kya~~~g~l~p~~Rv~~g~~~g~----~l~~~g~~l~~k~-~~~~~~~L~g~G~a~ly 75 (745)
T PF10101_consen 1 IGGNWLVRIGILVLLLGVVFLLKYAIDAGWLGPAVRVALGAALGL----ALLAAGERLRRKG-YRAFAQALAGGGIAVLY 75 (745)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHcCcCCHHHHHHHHHHHHH----HHHHHHHHHHHcc-cchHHHHHHHHHHHHHH
Confidence 356677777776666665553112234344445779988887764 4445566764432 23334433444444444
Q ss_pred HHhHHH-HhhhhccchHHHHHHHHHHHHHHHHH
Q 019567 124 GLLLTP-IMLSTIGISGPFILFSSLGLLWLSTW 155 (339)
Q Consensus 124 ~~~l~~-~l~~~~~w~~~f~~~~~~~~~~~~~~ 155 (339)
....++ .+.+..+....|....+++.....+.
T Consensus 76 ~t~~aa~~~y~l~~~~~af~~~~~v~~~~~~la 108 (745)
T PF10101_consen 76 LTVFAAYHLYGLIPPPVAFALLALVTAAAVALA 108 (745)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 444332 23344455555655555544444333
No 346
>COG1983 PspC Putative stress-responsive transcriptional regulator [Transcription / Signal transduction mechanisms]
Probab=29.45 E-value=1.6e+02 Score=19.02 Aligned_cols=34 Identities=15% Similarity=0.224 Sum_probs=17.7
Q ss_pred hhhhccc-----hHHHHHHHHHH------HHHHHHHHhhccCCCC
Q 019567 131 MLSTIGI-----SGPFILFSSLG------LLWLSTWTSKVTNDPC 164 (339)
Q Consensus 131 l~~~~~w-----~~~f~~~~~~~------~~~~~~~~~~~~~~~~ 164 (339)
+.+.+|| |..|.+..... ++.-++.++..|+.+.
T Consensus 21 la~yf~id~tlVRll~vl~~~~~~~~~~~ii~Yiia~~imP~~~~ 65 (70)
T COG1983 21 LAEYFGIDPTLVRLLFVLLTLFGGLTGFGIIAYIIAALIMPSEED 65 (70)
T ss_pred HHHHhCCChHHHHHHHHHHHHHhcchhHHHHHHHHHHHHCCCCcc
Confidence 5566665 44455444443 3334455556666554
No 347
>COG1280 RhtB Putative threonine efflux protein [Amino acid transport and metabolism]
Probab=29.27 E-value=3e+02 Score=22.07 Aligned_cols=30 Identities=13% Similarity=0.285 Sum_probs=15.4
Q ss_pred HHHHHHHHHhhHHHHHHHHHhhhhhhhhhh
Q 019567 202 SWTVIIANITNNWGYFVLLSWMPIYFNTVF 231 (339)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 231 (339)
+....+....+=-....+...+|++.....
T Consensus 114 f~~G~~~~l~NPK~~lf~la~~pqfv~~~~ 143 (208)
T COG1280 114 FRRGLLVNLLNPKAILFFLAFLPQFVDPGA 143 (208)
T ss_pred HHHHHHHHhhCcHHHHHHHHHHhhhcCCCC
Confidence 333344444443344445677777776643
No 348
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=28.92 E-value=1.9e+02 Score=19.53 Aligned_cols=36 Identities=14% Similarity=0.057 Sum_probs=26.3
Q ss_pred HHHHHHhhhHHHhhhhcc-------hHHHHHHHHHHHHHHHHH
Q 019567 29 GYIFSSVIGGALVDKYGG-------KKVLAWGVALWSLSTLLT 64 (339)
Q Consensus 29 ~~~i~~~~~g~l~dr~G~-------r~~l~~~~~~~~~~~~~~ 64 (339)
+.....+..+++.+|..+ ++.+..+.++...+.+++
T Consensus 30 ~~ta~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ 72 (86)
T PF10785_consen 30 GATAASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLL 72 (86)
T ss_pred HHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHH
Confidence 445566777788887765 677888877777777777
No 349
>PF07456 Hpre_diP_synt_I: Heptaprenyl diphosphate synthase component I; InterPro: IPR010898 This family contains component I of bacterial heptaprenyl diphosphate synthase (2.5.1.30 from EC) (approximately 170 residues long). This is one of the two dissociable subunits that form the enzyme, both of which are required for the catalysis of the biosynthesis of the side chain of menaquinone-7 [].
Probab=28.63 E-value=1.9e+02 Score=21.87 Aligned_cols=51 Identities=22% Similarity=0.174 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHH
Q 019567 24 SSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFF 82 (339)
Q Consensus 24 s~~~~~~~i~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~ 82 (339)
-.+.++..+.+...-.+..|..||+.-.++.-+ .- +.+||..+++++.++.
T Consensus 68 f~~Sl~Ggl~S~~vM~ll~~~~~~~~S~~giSi------~G--ai~HN~gQl~va~~i~ 118 (148)
T PF07456_consen 68 FLFSLAGGLLSLLVMALLKKLFKKKFSLIGISI------AG--AIAHNIGQLIVASLII 118 (148)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCccHHHHHH------HH--HHHHHHHHHHHHHHHH
Confidence 355666777777777888888776644443221 12 3357777777776653
No 350
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=27.91 E-value=1.3e+02 Score=17.54 Aligned_cols=19 Identities=16% Similarity=0.009 Sum_probs=8.9
Q ss_pred chHHHHHHHHHHHHHHHHH
Q 019567 137 ISGPFILFSSLGLLWLSTW 155 (339)
Q Consensus 137 w~~~f~~~~~~~~~~~~~~ 155 (339)
+.+.-++.+++..+..+..
T Consensus 24 ~~~~~~i~aviGAiill~i 42 (48)
T PF04226_consen 24 GSWGSFIVAVIGAIILLFI 42 (48)
T ss_pred chHHHHHHHHHHHHHHHHH
Confidence 3444445555554444333
No 351
>PF15061 DUF4538: Domain of unknown function (DUF4538)
Probab=27.46 E-value=54 Score=20.11 Aligned_cols=25 Identities=12% Similarity=0.081 Sum_probs=18.2
Q ss_pred ccchHHHHHHHHHHHHHHHHHHhhc
Q 019567 135 IGISGPFILFSSLGLLWLSTWTSKV 159 (339)
Q Consensus 135 ~~w~~~f~~~~~~~~~~~~~~~~~~ 159 (339)
-|||...++.+.++++.+.+.-...
T Consensus 3 rg~r~~~~~ggfVg~iG~a~Ypi~~ 27 (58)
T PF15061_consen 3 RGWRYALFVGGFVGLIGAALYPIYF 27 (58)
T ss_pred ccccchhhHHHHHHHHHHHHhhhhc
Confidence 3799999998888887665544443
No 352
>TIGR00844 c_cpa1 na(+)/h(+) antiporter. This model is specific for the fungal members of this family.
Probab=27.20 E-value=6.5e+02 Score=25.27 Aligned_cols=38 Identities=11% Similarity=0.162 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHH
Q 019567 112 ICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGL 149 (339)
Q Consensus 112 ~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~ 149 (339)
+...+..++.++...++.++...++|..++++.++++.
T Consensus 105 Ll~~~M~lT~livAL~a~~Li~GL~~~~ALLLGAILAP 142 (810)
T TIGR00844 105 LLVPVMTSGWLVIALFVWILVPGLNFPASLLMGACITA 142 (810)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhhcC
Confidence 33444455555555555555455778888877666553
No 353
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=27.15 E-value=78 Score=22.24 Aligned_cols=31 Identities=16% Similarity=0.063 Sum_probs=24.7
Q ss_pred chhhHhhHHhHHHHHHHHhhhhhhhHHHHHh
Q 019567 236 KQAAWFSAVPWGTMAVSGYMAGKASDSLIKA 266 (339)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~ 266 (339)
...|-.+...+-.-++.+++.++..|+....
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd 84 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPD 84 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCC
Confidence 4566677788888899999999999976544
No 354
>PF11872 DUF3392: Protein of unknown function (DUF3392); InterPro: IPR021813 This family of proteins are functionally uncharacterised. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.
Probab=27.08 E-value=2.3e+02 Score=20.01 Aligned_cols=39 Identities=23% Similarity=0.373 Sum_probs=23.6
Q ss_pred HHHHhcchhHHHHHH-HHHhhHHHHHHHHHhhhhhhhhhh
Q 019567 193 LRHLLSKLPSWTVII-ANITNNWGYFVLLSWMPIYFNTVF 231 (339)
Q Consensus 193 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~ 231 (339)
.|+..++.++..-.. ......++|.....+..+++.+.+
T Consensus 41 lrr~l~~~~Fi~Rt~~FIlicAFGYGll~v~~tP~l~~~L 80 (106)
T PF11872_consen 41 LRRLLSGYHFILRTLAFILICAFGYGLLIVWLTPLLARQL 80 (106)
T ss_pred HHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455556655554433 334455566667788888887753
No 355
>PRK11017 codB cytosine permease; Provisional
Probab=26.63 E-value=4.8e+02 Score=23.53 Aligned_cols=55 Identities=9% Similarity=0.014 Sum_probs=29.3
Q ss_pred hhCCcchhhHHHHHHHHHHHHHHHHHHhHH-HHhhhhccchHHHHHHHHHHHHHHH
Q 019567 99 RWFPSHERASAIGICMGGFHLGNVVGLLLT-PIMLSTIGISGPFILFSSLGLLWLS 153 (339)
Q Consensus 99 ~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~-~~l~~~~~w~~~f~~~~~~~~~~~~ 153 (339)
|-.|++||...........+.+........ +.+....+++.......+-.++..+
T Consensus 2 ~pvp~~~r~~~~~~~~~~~g~~~~~~~~~~g~~l~~GLs~~~ai~aiilG~~i~~~ 57 (404)
T PRK11017 2 SPVPQSARKGVLSLTMVMLGFTFFSASMWAGGTLGTGLSFVDFLLAVLIGNLLLGI 57 (404)
T ss_pred CCCCHHHhcchHhHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 445777776555544444444444444333 4444556777777665554444333
No 356
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=26.21 E-value=1.5e+02 Score=17.66 Aligned_cols=36 Identities=17% Similarity=0.135 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHhhhHHHhhh-hcchHHHHHHHHHHHH
Q 019567 24 SSFLWGYIFSSVIGGALVDK-YGGKKVLAWGVALWSL 59 (339)
Q Consensus 24 s~~~~~~~i~~~~~g~l~dr-~G~r~~l~~~~~~~~~ 59 (339)
........+.....|+..|+ ++.++...+..++.++
T Consensus 7 g~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~llG~ 43 (55)
T PF09527_consen 7 GFTMAAPILVGFFLGYWLDKWFGTSPWFTLIGLLLGI 43 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 34455566667777888886 5765555544444433
No 357
>COG1811 Uncharacterized membrane protein, possible Na+ channel or pump [General function prediction only]
Probab=26.10 E-value=3.5e+02 Score=21.99 Aligned_cols=53 Identities=15% Similarity=0.190 Sum_probs=28.2
Q ss_pred HHHHHHhhhhhhhHHHHHhccchHHHHHHHHHHHhhhhhhHhhhhhcccchhHHHHHHHHHH
Q 019567 248 TMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIAL 309 (339)
Q Consensus 248 ~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (339)
++++|..+..++.||+.+. .+...++....++.-......+........+++.
T Consensus 15 G~iiG~l~~~klper~k~~---------l~~~~Gl~~l~iGI~m~~~~~n~~~~ilslv~G~ 67 (228)
T COG1811 15 GGIIGLLIGKKLPERIKDI---------LMQCLGLAILGIGIKMALQAKNDIMILLALVIGA 67 (228)
T ss_pred HHHHHHHHcccCcHHHHHH---------HHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHH
Confidence 4455555555566665432 4445555555555555555666555444444433
No 358
>PRK10263 DNA translocase FtsK; Provisional
Probab=24.99 E-value=4.8e+02 Score=27.83 Aligned_cols=18 Identities=28% Similarity=0.499 Sum_probs=8.9
Q ss_pred HHHHHHhHHHHhhhhccc
Q 019567 120 GNVVGLLLTPIMLSTIGI 137 (339)
Q Consensus 120 g~~~~~~l~~~l~~~~~w 137 (339)
|+++|..++..+...+|.
T Consensus 143 GGIIG~lLs~lL~~LfG~ 160 (1355)
T PRK10263 143 GGVIGSLLSTTLQPLLHS 160 (1355)
T ss_pred cchHHHHHHHHHHHHHhH
Confidence 455555555544444443
No 359
>PF06783 UPF0239: Uncharacterised protein family (UPF0239); InterPro: IPR009621 This is a group of transmembrane proteins of unknown function.; GO: 0016021 integral to membrane
Probab=24.79 E-value=1.6e+02 Score=19.73 Aligned_cols=20 Identities=5% Similarity=-0.052 Sum_probs=12.0
Q ss_pred hHHHHHHHHHHHHHHHHHHh
Q 019567 138 SGPFILFSSLGLLWLSTWTS 157 (339)
Q Consensus 138 ~~~f~~~~~~~~~~~~~~~~ 157 (339)
|+-.++.+++-+++++.+.+
T Consensus 23 RYGLf~GAIFQliCilAiI~ 42 (85)
T PF06783_consen 23 RYGLFVGAIFQLICILAIIL 42 (85)
T ss_pred HHHHHHHHHHHHHHHHheee
Confidence 66667777776665544443
No 360
>TIGR02978 phageshock_pspC phage shock protein C. All members of this protein family are the phage shock protein PspC. These proteins contain a PspC domain, as do other members of the larger family of proteins described by Pfam model pfam04024. The phage shock regulon is restricted to the Proteobacteria and somewhat sparsely distributed there. It is expressed, under positive control of a sigma-54-dependent transcription factor, PspF, which binds and is modulated by PspA. Stresses that induce the psp regulon include phage secretin overexpression, ethanol, heat shock, and protein export defects.
Probab=24.09 E-value=2.2e+02 Score=20.68 Aligned_cols=35 Identities=14% Similarity=0.127 Sum_probs=17.4
Q ss_pred hhhhccc-----hHHHHHHHHHH-----HHHHHHHHhhccCCCCC
Q 019567 131 MLSTIGI-----SGPFILFSSLG-----LLWLSTWTSKVTNDPCN 165 (339)
Q Consensus 131 l~~~~~w-----~~~f~~~~~~~-----~~~~~~~~~~~~~~~~~ 165 (339)
+++++|| |..|.+..+++ ++.-+..++.+|+.|..
T Consensus 20 lA~y~gi~~~~VRl~~vl~~~~~~~~~~ll~Y~i~w~~lp~~p~~ 64 (121)
T TIGR02978 20 LADYFGVEVWLVRILVVSALLFGGGFFVLVAYIALWLLLDKKPIN 64 (121)
T ss_pred HHHHHCcCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCccc
Confidence 4455554 55555544332 12233455666776654
No 361
>PF13940 Ldr_toxin: Toxin Ldr, type I toxin-antitoxin system
Probab=23.88 E-value=1e+02 Score=16.38 Aligned_cols=18 Identities=11% Similarity=0.165 Sum_probs=10.3
Q ss_pred HhHHHHHHHHhhhhhhhH
Q 019567 244 VPWGTMAVSGYMAGKASD 261 (339)
Q Consensus 244 ~~~~~~~~~~~~~g~l~d 261 (339)
...+++++.+++.+|+-+
T Consensus 16 AP~iagIi~s~iv~w~~~ 33 (35)
T PF13940_consen 16 APIIAGIIASLIVGWLRN 33 (35)
T ss_pred hHHHHHHHHHHHHHHHHh
Confidence 344556666666666544
No 362
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=23.78 E-value=81 Score=26.59 Aligned_cols=61 Identities=11% Similarity=0.152 Sum_probs=44.3
Q ss_pred HHHHHHhhHHHHHHHHHhhhhhhhhhhCCccchhhHhhHHhHHHHHHHHhhhhh---------hhHHHHHh
Q 019567 205 VIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGK---------ASDSLIKA 266 (339)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~---------l~d~~~~~ 266 (339)
..+..+.+-.......+|+-.|+++ .|.++...+.++........+..++.|. -.||+|||
T Consensus 22 yGvGHmlNDitAScWFTYlllfltq-iglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~ 91 (412)
T KOG4830|consen 22 YGVGHMLNDITASCWFTYLLLFLTQ-IGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRR 91 (412)
T ss_pred echhHHHhhHHHHHHHHHHHHHHHH-hcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhhcce
Confidence 3455566666666677888888888 4899988888887877777777777653 35677776
No 363
>PRK10697 DNA-binding transcriptional activator PspC; Provisional
Probab=23.04 E-value=73 Score=22.97 Aligned_cols=17 Identities=18% Similarity=0.071 Sum_probs=9.6
Q ss_pred HHHHHHHHhhccCCCCC
Q 019567 149 LLWLSTWTSKVTNDPCN 165 (339)
Q Consensus 149 ~~~~~~~~~~~~~~~~~ 165 (339)
++.-+..++.+|+.|..
T Consensus 53 ~~~Yi~l~~~lp~~P~~ 69 (118)
T PRK10697 53 LVAYIILSFALDPMPDN 69 (118)
T ss_pred HHHHHHHHHhccCCccc
Confidence 33344556667776654
No 364
>PRK11588 hypothetical protein; Provisional
Probab=22.82 E-value=6.4e+02 Score=23.68 Aligned_cols=28 Identities=29% Similarity=0.214 Sum_probs=15.5
Q ss_pred hHHHhhhhcchHHHH--HHHHHHHHHHHHH
Q 019567 37 GGALVDKYGGKKVLA--WGVALWSLSTLLT 64 (339)
Q Consensus 37 ~g~l~dr~G~r~~l~--~~~~~~~~~~~~~ 64 (339)
.+++.+|++.|..++ +-..+++++....
T Consensus 136 i~~l~~k~~~~~~llIpil~~lFsl~G~~~ 165 (506)
T PRK11588 136 ILALIRKTRGNEILFIPVLFILFSLGGAVF 165 (506)
T ss_pred HHHHHHHhCCCcEEeHHHHHHHHHHHHHHh
Confidence 367788887664333 3344555544444
No 365
>COG1457 CodB Purine-cytosine permease and related proteins [Nucleotide transport and metabolism]
Probab=22.49 E-value=6.1e+02 Score=23.32 Aligned_cols=146 Identities=10% Similarity=-0.101 Sum_probs=68.7
Q ss_pred hhhCCcchhhHHHHHHHHHHHHHHHHHHhHHHHhhhh-ccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChHHHHH
Q 019567 98 SRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLST-IGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVSKSELRL 176 (339)
Q Consensus 98 ~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~l~~~-~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (339)
.|..|+|+|-..........+.-..++....|.+... .+++...+....-.++..+.....--.-++..-.+
T Consensus 11 ~~~vp~~~r~~~~~~~~vWfga~~~ias~~~G~ll~~~L~~~~si~aillG~llG~i~~A~~s~~Ga~~Glpq------- 83 (442)
T COG1457 11 IEPVPEESRKGWLNLFLVWFGANFTIASMVTGGLLVPGLSFGQSLLAILLGNLLGGIFMAYFSYQGARTGLPQ------- 83 (442)
T ss_pred CCCCChhhhhcchhHHHHHHHhHhHHHHHHHhccccccccHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCh-------
Confidence 3556777775444555454444444444444443332 66777666554444443333333221111111000
Q ss_pred HHhCCccccccCCCccHHHHhcchhHHHHHHHHHhhHHHHHHHHHhhhhhhhhhhCCccchhhHhhHHhHHHHHHHHhhh
Q 019567 177 IQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMA 256 (339)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 256 (339)
-...|..+-.+--+...+.......++++.+.++.-..... + +.........+.++...+..+++
T Consensus 84 -------------mi~sR~~fG~~Gs~l~sll~~~~~iGW~~v~~~l~~~a~~~-~-~~~~~~~~ili~g~l~~l~~ifG 148 (442)
T COG1457 84 -------------MILSRYPFGVKGSILPSLLNGITLIGWFGVNVILSGIAIGS-G-TGLPVWAGILIIGVLMTLVTIFG 148 (442)
T ss_pred -------------heeecccccchhHHHHHHHHHHHHhhHHHHHHHHhcccccc-C-CCCcHHHHHHHHHHHHHHHHHHh
Confidence 00112233333345555566666677777777665543111 1 22233333344555566666666
Q ss_pred hhhhHHHHH
Q 019567 257 GKASDSLIK 265 (339)
Q Consensus 257 g~l~d~~~~ 265 (339)
-+...++.|
T Consensus 149 ~r~l~~l~~ 157 (442)
T COG1457 149 YRALHKLER 157 (442)
T ss_pred HHHHHHHHH
Confidence 666666654
No 366
>COG3619 Predicted membrane protein [Function unknown]
Probab=22.02 E-value=4.5e+02 Score=21.58 Aligned_cols=40 Identities=13% Similarity=0.186 Sum_probs=21.1
Q ss_pred HhhhCCcch-hhHHHHHHHHHHHHHHHHHHhHHHHhhhhcc
Q 019567 97 TSRWFPSHE-RASAIGICMGGFHLGNVVGLLLTPIMLSTIG 136 (339)
Q Consensus 97 i~~~~~~~~-r~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~ 136 (339)
+.+++..|+ .-..-.......-++.++|...++.+...++
T Consensus 156 l~~~l~~k~~~~~~~~~~~~~~il~f~~GAi~g~ll~~~~g 196 (226)
T COG3619 156 LGRYLSGKDKEKLRDWLIYLSLILSFIVGAICGALLTLFFG 196 (226)
T ss_pred HHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 445554332 2222334445555666777777777766555
No 367
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=21.98 E-value=2.4e+02 Score=18.44 Aligned_cols=36 Identities=8% Similarity=0.189 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHhHHHHhhhhccchHHHHHHHHHHHH
Q 019567 112 ICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLL 150 (339)
Q Consensus 112 ~~~~~~~~g~~~~~~l~~~l~~~~~w~~~f~~~~~~~~~ 150 (339)
+.+....++.+++-. .|++.+. .+..+++.++..++
T Consensus 12 l~~~il~~~~iisfi-~Gy~~q~--~~~~~~~~~~g~~~ 47 (76)
T PF06645_consen 12 LMQYILIISAIISFI-VGYITQS--FSYTFYIYGAGVVL 47 (76)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHH--HHHHHHHHHHHHHH
Confidence 444445555555443 3455553 45555554444333
No 368
>PF13493 DUF4118: Domain of unknown function (DUF4118); PDB: 2KSF_A.
Probab=21.68 E-value=1.5e+02 Score=20.43 Aligned_cols=23 Identities=17% Similarity=0.381 Sum_probs=13.3
Q ss_pred HHHHHHHHHHhhhHHHhhhhcch
Q 019567 25 SFLWGYIFSSVIGGALVDKYGGK 47 (339)
Q Consensus 25 ~~~~~~~i~~~~~g~l~dr~G~r 47 (339)
.....+.+.+.+.|.+.||..||
T Consensus 83 ~~~~~~l~va~v~g~l~~~~r~~ 105 (105)
T PF13493_consen 83 ITFAVFLVVALVTGYLADRYRRQ 105 (105)
T ss_dssp HHHHHHHHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHHHHHHHhhC
Confidence 44445566677777777777654
No 369
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=21.25 E-value=3.1e+02 Score=19.40 Aligned_cols=65 Identities=12% Similarity=-0.057 Sum_probs=40.2
Q ss_pred HhhhHHHhhhhcchHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHhhhhcchhhhHHHHhh
Q 019567 34 SVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGVAMPAMSTLTSR 99 (339)
Q Consensus 34 ~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~g~~~~~~~~~~~i~~ 99 (339)
.-..=..+|.+.|+...+...+...++..+.+.+ -++.+.=.+.-...|+|..........+-.|
T Consensus 17 ~~~~lK~s~gf~~~~~~il~~v~~~~sf~~Ls~a-lk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E 81 (106)
T COG2076 17 GTTLLKYSDGFTRLWPSILTIVGYGLSFYLLSLA-LKTIPLGVAYAIWTGIGIVGTALVGVLLFGE 81 (106)
T ss_pred HHHHHHHHhcccccchHHHHHHHHHHHHHHHHHH-HhhCchHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 3344467888888887777777777777666443 2455655666677777755544444443333
No 370
>PRK09412 anaerobic C4-dicarboxylate transporter; Reviewed
Probab=21.20 E-value=6.4e+02 Score=23.08 Aligned_cols=9 Identities=22% Similarity=0.453 Sum_probs=5.2
Q ss_pred hCCCccchh
Q 019567 12 FGWSSSFLG 20 (339)
Q Consensus 12 ~~~s~~~~g 20 (339)
||.++.+..
T Consensus 39 ~~~~~~~~~ 47 (433)
T PRK09412 39 FGLKPGSIP 47 (433)
T ss_pred cCCCCCCCC
Confidence 566666543
Done!