Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>019569
MGDNGISTCASPSIWEEIDQSESYLVCSMYEEAASLGSSVLKRLRDSNNNYNEESYDMME
SAGMVFVQSLKELGRVADILNELKLLFTSVTDIPVQVLLTGVCLEISEGSYADVREFLEE
FLSKWSCVDGKYYLVLGIDQYLEVVEMYAVTLLGTVLNDVDLAISWIENAALPEENRQDL
LRRLHSLYSLKASAGSQGSSLLPDDFQQAHPSLKDPNVSERSSETLNTSYLPIRENVSNQ
TILKVSRQTYPGFWWFWPITLKLGNARIVLSNKKIVLGCLIFLAYYVIQRKRTDIRRSAW
RKILSVKKALVDLWQLAFAYQVNPLAAVQPLPAATRGGR

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  019569
        (339 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:1005716603 - symbol:APEM9 "AT3G10572" species:...   652  6.0e-64   1


>TAIR|locus:1005716603 [details] [associations]
            symbol:APEM9 "AT3G10572" species:3702 "Arabidopsis
            thaliana" [GO:0003824 "catalytic activity" evidence=ISS]
            [GO:0005739 "mitochondrion" evidence=ISM] [GO:0005730 "nucleolus"
            evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005777 "peroxisome" evidence=IDA] [GO:0043574 "peroxisomal
            transport" evidence=IMP] EMBL:CP002686 GO:GO:0005730 GO:GO:0005777
            GO:GO:0016301 EMBL:AY062684 EMBL:AY093365 IPI:IPI00519207
            RefSeq:NP_850555.1 UniGene:At.47208 IntAct:Q8W4B2
            EnsemblPlants:AT3G10572.1 GeneID:820223 KEGG:ath:AT3G10572
            TAIR:At3g10572 eggNOG:NOG274069 InParanoid:Q8W4B2 OMA:MEATDIW
            PhylomeDB:Q8W4B2 ProtClustDB:CLSN2690840 Genevestigator:Q8W4B2
            GO:GO:0043574 Uniprot:Q8W4B2
        Length = 333

 Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
 Identities = 155/346 (44%), Positives = 209/346 (60%)

Query:    14 IWEEIDQSESYLVCSMYEEAASLGSSVLKR-------LRDSNNNYNEESYDMMESAGMVF 66
             IW EI++SESYLVCSMYEEA SL SS+LKR       L D  +  + + +DM+ESAGMV 
Sbjct:     6 IWGEIERSESYLVCSMYEEAESLSSSILKRIFGNIDVLSDEASQGDHQFHDMLESAGMVL 65

Query:    67 VQSLKELGRVADILNELKLLFTSVTDIPVQVLLTGVCLEISEGSYADVREFLEEFLSKWS 126
             VQSL  +GR  +I+NEL+ +F  V  IPVQVLLTGVCL+IS GSY  VR+ LEEF   W 
Sbjct:    66 VQSLHGIGRTVEIVNELRDVFGEVAAIPVQVLLTGVCLQISNGSYLGVRDILEEFFRIWV 125

Query:   127 CVDGKYYL--------------VLGIDQYLEVVEMYAVTLLGTVLNDVDLAISWIENAAL 172
               D  Y L               L ID+Y+EVVE+Y   +L    ND+ LAISW+E AAL
Sbjct:   126 YKDNHYILNDAGVSTKGFHAKNCLDIDEYMEVVELYTFGVLAKFSNDMGLAISWVEKAAL 185

Query:   173 PEENRQDLLRRLHSLYSLKASAGSQGSSLLPDDFQQAHPSLKDPNVSERSSETLNTSYLP 232
             PEE RQ +LRRLHSL SLK ++  + +S             KD + +  +    N   L 
Sbjct:   186 PEERRQGILRRLHSLLSLKTASSFEENS-------------KDSSYAVVN----NKKSLG 228

Query:   233 IRENVSNQTILKVSRQTYPGFWWFW---PITLKLGNARIVLSNKKIVLGCLIFLAYYVIQ 289
               +N    + LK+S+Q  P  W  W   P++LK+GN +  +S  K+ +  +  +  Y ++
Sbjct:   229 NEKNDEIDSFLKLSKQHEP--WSLWSSHPLSLKVGNTQFSMSRGKVAVSLVGLIICYALK 286

Query:   290 RKRTDIRRSAWRKILSVKKALVDLWQLAFAYQVNPLAAVQPLPAAT 335
             RKR  + R   R++ S +KA+VD W+LAF+YQVNPLAA+Q +P+ T
Sbjct:   287 RKRAALIRIIRRQMESTRKAIVDFWKLAFSYQVNPLAAIQSIPSTT 332


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.133   0.392    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      339       339   0.00094  116 3  11 22  0.40    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  619 (66 KB)
  Total size of DFA:  232 KB (2126 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  29.64u 0.09s 29.73t   Elapsed:  00:00:01
  Total cpu time:  29.64u 0.09s 29.73t   Elapsed:  00:00:01
  Start:  Mon May 20 18:04:04 2013   End:  Mon May 20 18:04:05 2013

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