Query 019573
Match_columns 339
No_of_seqs 292 out of 2609
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 03:52:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019573.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019573hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lz8_A Putative chaperone DNAJ 100.0 1E-67 3.4E-72 497.4 23.4 284 3-337 28-313 (329)
2 2q2g_A HSP40 protein, heat sho 100.0 7.3E-47 2.5E-51 327.4 23.7 177 162-339 3-180 (180)
3 3agx_A DNAJ homolog subfamily 100.0 2.4E-46 8.2E-51 324.3 24.0 177 162-339 2-180 (181)
4 1c3g_A Heat shock protein 40; 100.0 3.3E-44 1.1E-48 307.9 18.1 169 163-335 1-170 (170)
5 1nlt_A Protein YDJ1, mitochond 100.0 9.7E-43 3.3E-47 316.0 21.3 176 159-335 8-248 (248)
6 3i38_A Putative chaperone DNAJ 99.9 4.9E-26 1.7E-30 180.4 10.9 93 242-338 2-94 (109)
7 1xao_A YDJ1, mitochondrial pro 99.9 5E-25 1.7E-29 178.0 12.4 93 246-339 1-97 (121)
8 1bq0_A DNAJ, HSP40; chaperone, 99.9 2.6E-24 9E-29 169.2 6.1 75 1-76 1-75 (103)
9 1hdj_A Human HSP40, HDJ-1; mol 99.9 1.2E-23 4.1E-28 156.6 7.4 74 1-76 1-74 (77)
10 2ej7_A HCG3 gene; HCG3 protein 99.9 8.1E-23 2.8E-27 154.0 6.8 72 3-74 9-80 (82)
11 2lgw_A DNAJ homolog subfamily 99.9 9.9E-23 3.4E-27 158.7 5.3 74 3-76 2-75 (99)
12 2o37_A Protein SIS1; HSP40, J- 99.9 1.2E-22 4.1E-27 156.4 5.5 72 2-77 7-78 (92)
13 2dmx_A DNAJ homolog subfamily 99.9 2.1E-22 7.3E-27 155.0 6.7 74 3-76 9-82 (92)
14 2dn9_A DNAJ homolog subfamily 99.9 1.9E-22 6.5E-27 150.9 6.3 71 2-73 6-76 (79)
15 2ctr_A DNAJ homolog subfamily 99.9 2.5E-22 8.7E-27 153.3 7.0 73 2-76 6-78 (88)
16 2ctp_A DNAJ homolog subfamily 99.9 6.2E-22 2.1E-26 147.7 6.3 70 2-73 6-75 (78)
17 2cug_A Mkiaa0962 protein; DNAJ 99.8 6.2E-22 2.1E-26 151.1 5.8 70 2-73 16-85 (88)
18 2och_A Hypothetical protein DN 99.8 1.7E-21 5.7E-26 143.5 6.3 67 2-72 7-73 (73)
19 2yua_A Williams-beuren syndrom 99.8 2.3E-21 7.7E-26 151.2 6.3 68 2-70 16-83 (99)
20 2ctw_A DNAJ homolog subfamily 99.8 2E-21 6.9E-26 154.1 6.1 73 2-75 16-88 (109)
21 2ctq_A DNAJ homolog subfamily 99.8 1.2E-21 4.1E-26 156.2 4.8 72 2-74 19-90 (112)
22 1wjz_A 1700030A21RIK protein; 99.8 1.2E-20 4.3E-25 145.7 4.9 70 2-71 15-89 (94)
23 3apq_A DNAJ homolog subfamily 99.8 8.3E-20 2.8E-24 161.1 5.8 72 3-75 2-73 (210)
24 2qsa_A DNAJ homolog DNJ-2; J-d 99.8 5E-20 1.7E-24 146.2 3.2 70 2-71 14-86 (109)
25 2ys8_A RAB-related GTP-binding 99.8 2.8E-19 9.4E-24 136.9 4.4 62 2-65 26-87 (90)
26 2l6l_A DNAJ homolog subfamily 99.7 6.6E-19 2.3E-23 148.5 5.5 70 2-71 9-83 (155)
27 1iur_A KIAA0730 protein; DNAJ 99.7 4.3E-19 1.5E-23 134.8 2.5 62 3-64 16-77 (88)
28 1gh6_A Large T antigen; tumor 99.7 2.2E-19 7.6E-24 142.9 -0.3 64 3-71 8-73 (114)
29 1faf_A Large T antigen; J doma 99.7 1.4E-18 4.9E-23 129.5 2.8 64 3-72 11-76 (79)
30 2pf4_E Small T antigen; PP2A, 99.7 5.3E-19 1.8E-23 150.2 0.0 64 3-71 11-76 (174)
31 3hho_A CO-chaperone protein HS 99.7 1.1E-17 3.8E-22 143.3 4.6 69 2-70 3-77 (174)
32 1fpo_A HSC20, chaperone protei 99.7 1.1E-17 3.8E-22 142.8 4.0 67 4-70 2-74 (171)
33 1n4c_A Auxilin; four helix bun 99.7 1E-17 3.5E-22 143.1 3.3 64 3-66 117-182 (182)
34 2qwo_B Putative tyrosine-prote 99.7 9.2E-18 3.2E-22 127.9 2.3 57 3-59 33-91 (92)
35 3bvo_A CO-chaperone protein HS 99.7 2.3E-17 7.8E-22 144.9 5.1 67 2-68 42-114 (207)
36 3ag7_A Putative uncharacterize 99.7 2.3E-17 7.7E-22 129.7 2.3 59 2-61 40-104 (106)
37 2guz_A Mitochondrial import in 99.6 8.5E-17 2.9E-21 117.4 2.0 57 3-64 14-71 (71)
38 3uo3_A J-type CO-chaperone JAC 99.6 1E-16 3.4E-21 137.9 2.3 64 3-70 11-81 (181)
39 3apo_A DNAJ homolog subfamily 99.6 6E-17 2.1E-21 168.9 -0.0 74 2-76 20-93 (780)
40 3i38_A Putative chaperone DNAJ 99.4 3E-13 1E-17 106.7 5.4 81 159-253 8-88 (109)
41 1xao_A YDJ1, mitochondrial pro 99.3 1.5E-12 5E-17 104.8 5.2 82 160-253 4-90 (121)
42 1c3g_A Heat shock protein 40; 99.1 8.5E-11 2.9E-15 100.1 6.1 81 159-251 83-165 (170)
43 3agx_A DNAJ homolog subfamily 99.1 9.5E-11 3.2E-15 100.8 5.7 81 159-251 89-171 (181)
44 2y4t_A DNAJ homolog subfamily 99.1 8.2E-11 2.8E-15 112.4 5.2 66 3-68 382-449 (450)
45 2q2g_A HSP40 protein, heat sho 99.1 1.3E-10 4.5E-15 99.8 5.7 81 159-251 89-171 (180)
46 1nlt_A Protein YDJ1, mitochond 99.0 2.5E-10 8.5E-15 103.0 6.3 85 158-254 157-246 (248)
47 3lz8_A Putative chaperone DNAJ 98.9 5.6E-10 1.9E-14 104.6 5.1 80 159-252 228-307 (329)
48 2guz_B Mitochondrial import in 98.8 2.2E-09 7.4E-14 76.1 3.6 51 5-60 6-59 (65)
49 2ctt_A DNAJ homolog subfamily 91.6 0.0098 3.3E-07 45.7 -3.0 30 163-192 2-31 (104)
50 2cqn_A Formin-binding protein 31.9 77 0.0026 22.3 4.8 56 15-71 6-63 (77)
51 4a3n_A Transcription factor SO 31.0 57 0.002 21.8 4.0 42 21-68 14-55 (71)
52 1i11_A Transcription factor SO 30.9 82 0.0028 21.8 4.9 42 21-68 16-57 (81)
53 2pi2_E Replication protein A 1 28.5 2.2E+02 0.0074 22.5 9.1 63 267-336 58-125 (142)
54 1uzc_A Hypothetical protein FL 28.4 63 0.0021 22.4 3.8 54 13-70 10-66 (71)
55 2b7e_A PRE-mRNA processing pro 28.2 62 0.0021 21.7 3.5 49 18-70 3-56 (59)
56 1hry_A Human SRY; DNA, DNA-bin 28.1 70 0.0024 21.8 4.1 42 21-68 16-57 (76)
57 2crj_A SWI/SNF-related matrix- 27.5 97 0.0033 22.1 4.9 42 21-68 19-60 (92)
58 1wz6_A HMG-box transcription f 27.3 72 0.0025 22.2 4.1 42 21-68 19-60 (82)
59 1hme_A High mobility group pro 24.4 1.2E+02 0.0043 20.5 4.9 42 21-68 18-59 (77)
60 3f27_D Transcription factor SO 24.4 91 0.0031 21.6 4.2 42 21-68 18-59 (83)
61 1ckt_A High mobility group 1 p 22.3 1.7E+02 0.0058 19.4 5.2 43 22-68 14-56 (71)
62 1msz_A DNA-binding protein smu 21.9 43 0.0015 24.3 1.9 19 319-337 35-53 (86)
63 2cs1_A PMS1 protein homolog 1; 21.9 97 0.0033 22.1 4.0 42 21-68 19-60 (92)
64 3zxf_A Galectin-7; sugar bindi 21.6 1.7E+02 0.006 22.6 5.7 44 281-324 8-59 (138)
65 1wgf_A Upstream binding factor 21.5 84 0.0029 22.4 3.5 43 21-69 32-74 (90)
66 1qqr_A Streptokinase domain B; 21.5 45 0.0016 26.2 2.1 30 6-35 35-64 (138)
67 3nm9_A HMG-D, high mobility gr 21.3 1.5E+02 0.0052 19.9 4.7 38 21-67 15-52 (73)
68 4euw_A Transcription factor SO 21.2 1E+02 0.0036 22.7 4.1 42 21-68 41-82 (106)
69 1ueb_A EF-P, TT0860, elongatio 21.0 93 0.0032 25.8 4.1 18 204-221 157-174 (184)
70 2wkk_A Galectin-2; sugar-bindi 20.2 1.9E+02 0.0064 22.9 5.7 43 282-324 10-58 (150)
71 1gt0_D Transcription factor SO 20.1 1.1E+02 0.0037 21.0 3.8 42 21-68 14-55 (80)
No 1
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=100.00 E-value=1e-67 Score=497.38 Aligned_cols=284 Identities=27% Similarity=0.405 Sum_probs=162.5
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccCCCCCCCC
Q 019573 3 VDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMPPPG 82 (339)
Q Consensus 3 ~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~~ 82 (339)
+|||++|||+++||.+|||+|||+||++||||+|++ ..|+++|++|++||++|+||.+|+.||+|+......+
T Consensus 28 ~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~--~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~~~----- 100 (329)
T 3lz8_A 28 KDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKE--NDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQHRNDPG----- 100 (329)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCC--hHHHHHHHHHHHHHHHhhhhhhhcccchhhccccCCC-----
Confidence 799999999999999999999999999999999986 3788999999999999999999999999964321111
Q ss_pred CCCCCCCCCCCCCCCccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCccccCC
Q 019573 83 ASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPFGDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRKA 162 (339)
Q Consensus 83 ~~~~~~~~~f~~~~~~~~f~~~~~~d~f~~~fg~~~~f~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 162 (339)
.++ ++..+++ .|...++.|+|++|||+. +. .+ +...++++
T Consensus 101 ~~~--~~~~~~~-----~f~~~~f~diF~~~Fg~~----g~-------~~----------------------~~~~~~~g 140 (329)
T 3lz8_A 101 FGR--QRQTHEQ-----SYSQQDFDDIFSSMFGQQ----AH-------QR----------------------RRQHAARG 140 (329)
T ss_dssp ----------------------------------------------------------------------------CCCC
T ss_pred ccc--ccccccC-----CcCCCchhhhhHhhhcCc----CC-------CC----------------------CCCCcCCC
Confidence 000 0000000 111125678899998731 00 00 00124578
Q ss_pred CCeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeee-eeEEEEEeCCCCcCCCEEEecCCCcCCC-CCCCccEEEEEe
Q 019573 163 APIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTT-EEILTIEIKPGWKKGTKITFPEKGNELR-NVIPSDLIFIID 240 (339)
Q Consensus 163 ~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~-~~~~~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDL~v~i~ 240 (339)
.|+.++|.|||+|+|.|++++|.+.+.+||+.|++..+ .++++|+||||+++|++|+|+|+|++.+ ++.+|||||+|+
T Consensus 141 ~Dl~~~l~vsleea~~G~~k~i~i~~~v~~g~G~v~~~~~~~l~V~IP~Gv~~G~~Irl~G~G~~g~~gg~~GDL~v~I~ 220 (329)
T 3lz8_A 141 HDLEIEVAVFLEETLAEQTRTISYNLPVYNVFGMIESETPKTLNVKIPAGVVDGQRIRLKGQGTPGENGGPNGDLWLVIH 220 (329)
T ss_dssp CCEEEEECCCTTGGGSCEEEEEEEEEEECCSCC-CCEEEEEEEEEEECTTCCTTCEEEESSCSCCC---CCCCCEEEEEC
T ss_pred CCEEEEEecchhhhhhccceEEEEEEEeecCCeEEEEecceEEEEeCCCCCCCCCEEEEcccccCCCCCCCCCcEEEEEE
Confidence 99999999999999999999999999999999975443 6789999999999999999999999984 567999999999
Q ss_pred ecCCCCcccCCCceEEEEeecHHHHhcCcEEEEecCCCcEEEEEeCCccCCCcEEEEccCCCCCCCCCCCCCCEEEEEEE
Q 019573 241 EKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNI 320 (339)
Q Consensus 241 v~~h~~f~r~g~DL~~~l~I~l~~al~G~~~~i~~~~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~Gdl~v~~~v 320 (339)
|+||+.|+|+|+||+++++|+|+||++|++++|+|+||+ ++|+||+++++|+++||+|+|||.. +.+|||||+|+|
T Consensus 221 v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~VptLdG~-v~l~ip~gt~~g~~~rl~G~GmP~~---~~rGDL~v~~~V 296 (329)
T 3lz8_A 221 IAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKES-ILLTVPPGSQAGQRLRIKGKGLVSK---THTGDLFAVIKI 296 (329)
T ss_dssp CCCCSSCEEETTEEEEEEEECHHHHHHCEEEEECCSSSC-EEEEECTTCCTTCEEEETTCSCBCS---SCBCCEEEEEEE
T ss_pred EecCCccEEcCCcEEEEEECCHHHHcCCCeEEEECCCCC-EEEEECCCCCCCCEEEEcCCCCCCC---CCCCCEEEEEEE
Confidence 999999999999999999999999999999999999997 7999999999999999999999964 468999999999
Q ss_pred ECCCCCCHHHHHHHHhh
Q 019573 321 KFPSKLTTEQKSGLKRL 337 (339)
Q Consensus 321 ~~P~~l~~~~~~~l~~~ 337 (339)
.+|+.|+++|+++|+++
T Consensus 297 ~~P~~l~~~q~~~l~~~ 313 (329)
T 3lz8_A 297 VMPTKPDEKARELWQQL 313 (329)
T ss_dssp CCCSSCCHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHH
Confidence 99999999999999886
No 2
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=7.3e-47 Score=327.37 Aligned_cols=177 Identities=40% Similarity=0.727 Sum_probs=167.2
Q ss_pred CCCeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeeeeeEEEEEeCCCCcCCCEEEecCCCcC-CCCCCCccEEEEEe
Q 019573 162 AAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNE-LRNVIPSDLIFIID 240 (339)
Q Consensus 162 ~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~-~~~~~~GDL~v~i~ 240 (339)
+.|+.++|.|||+|||+|+++++.+.+.+.|++| .+.+.++++|+|||||++|++|+|+|+|++ .+++.+|||||+|+
T Consensus 3 g~d~~~~l~islee~~~G~~k~i~~~~~~~c~~g-~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~g~~gg~~GDl~v~i~ 81 (180)
T 2q2g_A 3 PRSHEVPLLVTLEELYLGKRKKIKVTRKRFIEHK-VRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPGTSPGDLVLIIQ 81 (180)
T ss_dssp -CEEEEEEEECHHHHHHCEEEEEEEEEEEEETTE-EEEEEEEEEEEECTTCCTTCEEEETTCSCCSSTTSCCCEEEEEEE
T ss_pred CCCEEEEEEeeHHHhcCCcEEEEEEeEEEecCCc-eEEeeEEEEEEECCCCcCCcEEEEeeccCCCCCCCccccEEEEEE
Confidence 6799999999999999999999999999988876 578889999999999999999999999999 58889999999999
Q ss_pred ecCCCCcccCCCceEEEEeecHHHHhcCcEEEEecCCCcEEEEEeCCccCCCcEEEEccCCCCCCCCCCCCCCEEEEEEE
Q 019573 241 EKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNI 320 (339)
Q Consensus 241 v~~h~~f~r~g~DL~~~l~I~l~~al~G~~~~i~~~~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~Gdl~v~~~v 320 (339)
+++|+.|+|+|+||+++++|||+||++|+++.|+|+||+.++|++|+++++|+++||+|+|||..++++.+|||||+|+|
T Consensus 82 ~~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~v~i~ip~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V 161 (180)
T 2q2g_A 82 TKTHPRFTRDDCHLIMKVTIPLVRALTGFTCPVTTLDNRNLQIPIKEIVNPKTRKIVPNEGMPIKNQPGQKGDLILEFDI 161 (180)
T ss_dssp ECCCSSCEEETTEEEEEEEEEHHHHHHCEEEEEECTTCCEEEEEECSCCCTTCEEEETTCSCBCSSSTTCBCCEEEEEEE
T ss_pred EEecccEEEcCCEEEEEEEcCHHHHhCCCEEEeeCCCCCEEEEECCCccCCCEEEEECCcCCCcCCCCCCcCCEEEEEEE
Confidence 99999999999999999999999999999999999999889999999999999999999999976545678999999999
Q ss_pred ECCCCCCHHHHHHHHhhCC
Q 019573 321 KFPSKLTTEQKSGLKRLIP 339 (339)
Q Consensus 321 ~~P~~l~~~~~~~l~~~lp 339 (339)
.||++||++|+++|+++||
T Consensus 162 ~~P~~Ls~~q~~~l~~~~p 180 (180)
T 2q2g_A 162 CFPKSLTPEQKKLIKEALD 180 (180)
T ss_dssp ECCSCCCHHHHHHHHHHC-
T ss_pred ECCCCCCHHHHHHHHHhcC
Confidence 9999999999999999997
No 3
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A
Probab=100.00 E-value=2.4e-46 Score=324.26 Aligned_cols=177 Identities=46% Similarity=0.884 Sum_probs=162.7
Q ss_pred CCCeEEEEeeChhhheeCceEEEEEEEEEE--cCCCceeeeeeEEEEEeCCCCcCCCEEEecCCCcCCCCCCCccEEEEE
Q 019573 162 AAPIERTLPCSLEDLYKGTTKKMKISRDVI--DASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRNVIPSDLIFII 239 (339)
Q Consensus 162 ~~d~~~~l~itl~e~~~G~~~~i~~~~~~~--~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDL~v~i 239 (339)
+.|+.++|.|||+|||+|+++++.+.+.+. .|.| .+.+.++++|+||+||++|++|+|+|+|++.+++.+|||||+|
T Consensus 2 ~~d~~~~l~islee~~~G~~k~i~i~~~c~~c~G~g-~~~~~~~l~V~Ip~G~~~G~~ir~~G~G~~~~~g~~GDl~v~i 80 (181)
T 3agx_A 2 DPPVTHDLRVSLEEIYSGCTKKMKISHKRLNPDGKS-IRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVL 80 (181)
T ss_dssp ----CEEEEECHHHHHHCEEEEEEEEEEEECTTSSC-EEEEEEEEEEEECTTCCTTCEEEETTCSCCCSSSCCCCEEEEE
T ss_pred CCCEEEEEEEEHHHhcCCcEEEEEEecccCCCCCce-EEEEeEEEEEEECCCccCCcEEEEeeccccCCCCCcccEEEEE
Confidence 358899999999999999999999987654 4455 5778899999999999999999999999999888999999999
Q ss_pred eecCCCCcccCCCceEEEEeecHHHHhcCcEEEEecCCCcEEEEEeCCccCCCcEEEEccCCCCCCCCCCCCCCEEEEEE
Q 019573 240 DEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFN 319 (339)
Q Consensus 240 ~v~~h~~f~r~g~DL~~~l~I~l~~al~G~~~~i~~~~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~Gdl~v~~~ 319 (339)
++++|+.|+|+|+||+++++|||+||++|+++.|+|+||++++|++|+++++|+++||+|+|||..++++.+|||||+|+
T Consensus 81 ~~~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~~~i~i~~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~ 160 (181)
T 3agx_A 81 KDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFE 160 (181)
T ss_dssp EECCCSSCEEETTEEEEEEEEEHHHHHHCEEEEEECTTSCEEEEEECSCCCTTCEEEETTCSCBCSSSTTSBCCEEEEEE
T ss_pred EEeccccceeeCCcEEEEEEcCHHHHhCCCEEEeECCCCCEEEEECCCccCCCcEEEECCcCCCcCCCCCCcCCEEEEEE
Confidence 99999999999999999999999999999999999999988999999999999999999999997654567899999999
Q ss_pred EECCCCCCHHHHHHHHhhCC
Q 019573 320 IKFPSKLTTEQKSGLKRLIP 339 (339)
Q Consensus 320 v~~P~~l~~~~~~~l~~~lp 339 (339)
|.+|+.||++|+++|+++||
T Consensus 161 V~~P~~ls~~q~~~l~~~~~ 180 (181)
T 3agx_A 161 VIFPERIPQTSRTVLEQVLP 180 (181)
T ss_dssp EECCSCCCHHHHHHHHHHSC
T ss_pred EECCCCCCHHHHHHHHHhcc
Confidence 99999999999999999987
No 4
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A
Probab=100.00 E-value=3.3e-44 Score=307.91 Aligned_cols=169 Identities=40% Similarity=0.732 Sum_probs=157.0
Q ss_pred CCeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeeeeeEEEEEeCCCCcCCCEEEecCCCcCC-CCCCCccEEEEEee
Q 019573 163 APIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNEL-RNVIPSDLIFIIDE 241 (339)
Q Consensus 163 ~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~-~~~~~GDL~v~i~v 241 (339)
.|+.++|.|||+|||+|+++++.+.+. +++|+. +.++++|+||||+++|++|+|+|+|++. +++.+|||||+|++
T Consensus 1 ~d~~~~l~islee~~~G~~k~i~~~~~--~~~G~~--~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~gg~~GDl~v~i~v 76 (170)
T 1c3g_A 1 ETVQVNLPVSLEDLFVGKKKSFKIGRK--GPHGAS--EKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQE 76 (170)
T ss_dssp CEEEEEEEECHHHHHHTCEEEEEEEEE--ETTTEE--EEEEEEEECCTTCCTTCEEEESSCSSBCSSSSCBCEEEEEEEE
T ss_pred CCEEEEEEeEHHHhhCCcEEEEEEEEe--cCCCcE--EeEEEEEEeCCCccCCCEEEEeccccCCCCCCccccEEEEEEE
Confidence 378999999999999999999999887 356743 7889999999999999999999999965 77889999999999
Q ss_pred cCCCCcccCCCceEEEEeecHHHHhcCcEEEEecCCCcEEEEEeCCccCCCcEEEEccCCCCCCCCCCCCCCEEEEEEEE
Q 019573 242 KPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIK 321 (339)
Q Consensus 242 ~~h~~f~r~g~DL~~~l~I~l~~al~G~~~~i~~~~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~Gdl~v~~~v~ 321 (339)
++|+.|+|+|+||+++++|||+||++|+++.|+|+||++++|++|+++++|+++||+|+|||..++++.+|||||+|+|.
T Consensus 77 ~~h~~F~R~G~DL~~~~~Isl~eAllG~~~~v~tldG~~~~i~i~~~t~~g~~~rl~g~G~p~~~~~~~~GDL~V~~~V~ 156 (170)
T 1c3g_A 77 KSHPNFKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVD 156 (170)
T ss_dssp CCCSSEEEETTEEEEEECCBHHHHHHCEEEEEECSSSCEEEEEESSCCCTTCEEECTTCSCBCSSCTTSBCCEEEEECCB
T ss_pred ccCCccEEeCCcEeEEEEcCHHHHhCCCeEEeeCCCCCEEEEECCCccCCCcEEEEeCCCCCcCCCCCCCCCEEEEEEEE
Confidence 99999999999999999999999999999999999998899999999999999999999999765456789999999999
Q ss_pred CCCCCCHHHHHHHH
Q 019573 322 FPSKLTTEQKSGLK 335 (339)
Q Consensus 322 ~P~~l~~~~~~~l~ 335 (339)
+|++||++|+++|+
T Consensus 157 ~P~~Ls~~q~~~l~ 170 (170)
T 1c3g_A 157 YPISLNDAQKRAID 170 (170)
T ss_dssp CCSSCCTTHHHHTC
T ss_pred CCCCCCHHHHHhhC
Confidence 99999999999874
No 5
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=100.00 E-value=9.7e-43 Score=316.00 Aligned_cols=176 Identities=38% Similarity=0.672 Sum_probs=150.2
Q ss_pred ccCCCCeEEEEeeChhhheeCceEEEEEEEEEEc----CC----------------Cc----------------------
Q 019573 159 LRKAAPIERTLPCSLEDLYKGTTKKMKISRDVID----AS----------------GR---------------------- 196 (339)
Q Consensus 159 ~~~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~----g~----------------G~---------------------- 196 (339)
++++.|+.++|.|||+|||+|++++|.+.+.+.| |+ |.
T Consensus 8 ~~~g~d~~~~l~vslee~~~G~~k~i~~~r~~~C~~C~G~G~~~g~~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~ 87 (248)
T 1nlt_A 8 PQRGKDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGAVKKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCH 87 (248)
T ss_dssp CCBCCCEEEEEEECTTHHHHCEEEEEEEEEEEECTTTTTCSBSTTTCCCCTTSSSSSCEEEEEESSSEEEEEECSCTTCS
T ss_pred CCCCCCEEEEEEecHHHhcCCceEEEEeeEEEeCCCCcCccCCCCCCccCCCCCCCcEEEEEEecCceEEEEEEcCCCCC
Confidence 4678999999999999999999999999876532 11 11
Q ss_pred -------------------eeeeeeEEEEEeCCCCcCCCEEEecCCCcCCCCCCCccEEEEEeecCCCCcccCCCceEEE
Q 019573 197 -------------------PNTTEEILTIEIKPGWKKGTKITFPEKGNELRNVIPSDLIFIIDEKPHSLFKRDGNDLVVT 257 (339)
Q Consensus 197 -------------------~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDL~v~i~v~~h~~f~r~g~DL~~~ 257 (339)
.+.+.++++|+|||||++|++|+|+|+|++.+++.+|||||+|++++|+.|+|+|+||+++
T Consensus 88 G~G~~i~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~g~~GDl~v~i~v~~h~~F~R~G~DL~~~ 167 (248)
T 1nlt_A 88 GTGDIIDPKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVFKGEADQAPDVIPGDVVFIVSERPHKSFKRDGDDLVYE 167 (248)
T ss_dssp SSSSCCCTTSBCSSSTTSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCTTCBCCCEEEEEEECCCSSCEEETTEEEEE
T ss_pred CcCEEeccCCCCcccCCCceEeeeEEEEEEECCCccCCCEEEEeeeecCCCCCCcceEEEEEEEecCccceeeCCEEEEE
Confidence 2456789999999999999999999999999888999999999999999999999999999
Q ss_pred EeecHHHHhcCcEEEEecCCCcEEEEEeCCc--cCCCcEEEEccCCCCCCCCCCCCCCEEEEEEEECCCC--CCHHHHHH
Q 019573 258 QKISLVEALTGYTVQLTTLDGRTLTVPINSV--ISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSK--LTTEQKSG 333 (339)
Q Consensus 258 l~I~l~~al~G~~~~i~~~~g~~i~v~i~~~--~~~g~~~rl~g~G~p~~~~~~~~Gdl~v~~~v~~P~~--l~~~~~~~ 333 (339)
++|||+|||+|+++.|+||||+.++|+||++ +++|+++||+|+|||...++ .+|||||+|+|+||+. ||++|+++
T Consensus 168 ~~Isl~eAllG~~i~v~tldG~~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~-~~GDL~V~~~V~~P~~~~Ls~~q~~~ 246 (248)
T 1nlt_A 168 AEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYG-GYGNLIIKFTIKDPENHFTSEENLKK 246 (248)
T ss_dssp EEEEHHHHHHCBCCEEECSSSCEEECCBCTTTTCSTTCEEEETTCSCBCSSSC-SBCCEEEEEEEECCC-----------
T ss_pred EEeCHHHHhcCCEEEEeCCCCCEEEEEeCCCCeeCCCeEEEEcCCCCccCCCC-CcCCEEEEEEEECCCCCCCCHHHHHh
Confidence 9999999999999999999998899999988 99999999999999976533 6899999999999999 99999998
Q ss_pred HH
Q 019573 334 LK 335 (339)
Q Consensus 334 l~ 335 (339)
|+
T Consensus 247 l~ 248 (248)
T 1nlt_A 247 LE 248 (248)
T ss_dssp --
T ss_pred hC
Confidence 75
No 6
>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}
Probab=99.93 E-value=4.9e-26 Score=180.41 Aligned_cols=93 Identities=24% Similarity=0.340 Sum_probs=86.9
Q ss_pred cCCCCcccCCCceEEEEeecHHHHhcCcEEEEecCCCcEEEEEeCCccCCCcEEEEccCCCCCCCCCCCCCCEEEEEEEE
Q 019573 242 KPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIK 321 (339)
Q Consensus 242 ~~h~~f~r~g~DL~~~l~I~l~~al~G~~~~i~~~~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~Gdl~v~~~v~ 321 (339)
+||+.|+|+|+||+++++|||+||++|+++.|+|+|| .++|+||+++++|+++||+|+|||. . +.+|||||+|+|.
T Consensus 2 kph~~F~R~G~DL~~~~~Isl~eAl~G~~i~v~tldG-~~~v~ip~g~~~G~~~rl~G~G~p~-~--~~~GDL~v~~~V~ 77 (109)
T 3i38_A 2 NAHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKE-SILLTVPPGSQAGQRLRIKGKGLVS-K--THTGDLFAVIKIV 77 (109)
T ss_dssp --CCCCEEETTEEEEEEEECHHHHHHCEEEEECCSSS-CEEEEECTTCCTTCEEEETTCSCBC-S--SCBCCEEEEEEEC
T ss_pred CCCCCeEEECCEEEEEEEcCHHHHhCCCEEEEEcCCC-CEEEeeCCCcCcCeEEEECCccCCC-C--CCCcCEEEEEEEE
Confidence 6899999999999999999999999999999999999 5999999999999999999999996 3 3799999999999
Q ss_pred CCCCCCHHHHHHHHhhC
Q 019573 322 FPSKLTTEQKSGLKRLI 338 (339)
Q Consensus 322 ~P~~l~~~~~~~l~~~l 338 (339)
+|+.|+++|+++|++++
T Consensus 78 ~P~~Ls~~q~~~l~~l~ 94 (109)
T 3i38_A 78 MPTKPDEKARELWQQLA 94 (109)
T ss_dssp CCSSCCHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHH
Confidence 99999999999999874
No 7
>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}
Probab=99.92 E-value=5e-25 Score=178.03 Aligned_cols=93 Identities=44% Similarity=0.700 Sum_probs=84.3
Q ss_pred CcccCCCceEEEEeecHHHHhcCcEEEEecCCCcEEEEEeCCc--cCCCcEEEEccCCCCCCCCCCCCCCEEEEEEEECC
Q 019573 246 LFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSV--ISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFP 323 (339)
Q Consensus 246 ~f~r~g~DL~~~l~I~l~~al~G~~~~i~~~~g~~i~v~i~~~--~~~g~~~rl~g~G~p~~~~~~~~Gdl~v~~~v~~P 323 (339)
.|+|+|+||+++++|+|+||++|+++.|+|+||++++|+||++ +++|+++||+|+|||..+++ .+|||||+|+|.+|
T Consensus 1 ~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~-~~GDL~V~~~V~~P 79 (121)
T 1xao_A 1 SFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYG-GYGNLIIKFTIKFP 79 (121)
T ss_dssp CCEEETTEEEEEEEEEHHHHHHCEEEEEECTTSCEEEEEECTTSCCCTTCEEEETTCSCC-------CCCEEEEEEEECC
T ss_pred CceEECCeEEEEEEcCHHHHhCCCEEEEecCCCCEEEEEeCCCCeeCCCcEEEECCCCCCCCCCC-CCCCEEEEEEEECC
Confidence 4899999999999999999999999999999998899999988 99999999999999976533 68999999999999
Q ss_pred CC--CCHHHHHHHHhhCC
Q 019573 324 SK--LTTEQKSGLKRLIP 339 (339)
Q Consensus 324 ~~--l~~~~~~~l~~~lp 339 (339)
+. |+++|+++|++++|
T Consensus 80 ~~~~ls~~q~~~l~~l~~ 97 (121)
T 1xao_A 80 ENHFTSEENLKKLEEILP 97 (121)
T ss_dssp CTTCSCHHHHHHHHHHSC
T ss_pred CCCCCCHHHHHHHHHHcc
Confidence 99 99999999999986
No 8
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.90 E-value=2.6e-24 Score=169.18 Aligned_cols=75 Identities=56% Similarity=0.985 Sum_probs=69.8
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccCC
Q 019573 1 MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKG 76 (339)
Q Consensus 1 ~~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~ 76 (339)
|..|||+||||+++|+.++||+|||+|+++||||+++.. +.++++|++|++||++|+||.+|+.||++|++++..
T Consensus 1 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~ 75 (103)
T 1bq0_A 1 AKQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGD-KEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQ 75 (103)
T ss_dssp CCCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTT-CTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSSCS
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCc-HHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhhcc
Confidence 778999999999999999999999999999999999854 468899999999999999999999999999987753
No 9
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.89 E-value=1.2e-23 Score=156.63 Aligned_cols=74 Identities=61% Similarity=1.106 Sum_probs=69.3
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccCC
Q 019573 1 MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKG 76 (339)
Q Consensus 1 ~~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~ 76 (339)
|+.|||+||||+++|+.++||+|||+|+++||||+++. ..+.+.|+.|++||++|+||.+|+.||++|.+++.+
T Consensus 1 m~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~--~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~ 74 (77)
T 1hdj_A 1 MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKE--PGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKG 74 (77)
T ss_dssp CCCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCC--TTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGCCS
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--ccHHHHHHHHHHHHHHHCCHHHHHHHHHHccccccc
Confidence 88999999999999999999999999999999999976 368899999999999999999999999999887653
No 10
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.87 E-value=8.1e-23 Score=154.00 Aligned_cols=72 Identities=63% Similarity=1.102 Sum_probs=67.7
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCcccc
Q 019573 3 VDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGL 74 (339)
Q Consensus 3 ~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~ 74 (339)
.|||+||||+++|+.++||+|||+|+++||||+++...+.+.++|++|++||++|+||.+|+.||++|..+.
T Consensus 9 ~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~~ 80 (82)
T 2ej7_A 9 VDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGPS 80 (82)
T ss_dssp CCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCSC
T ss_pred cCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCcccc
Confidence 699999999999999999999999999999999987766889999999999999999999999999997654
No 11
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.86 E-value=9.9e-23 Score=158.72 Aligned_cols=74 Identities=61% Similarity=1.106 Sum_probs=67.1
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccCC
Q 019573 3 VDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKG 76 (339)
Q Consensus 3 ~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~ 76 (339)
.|||+||||+++|+.+|||+|||+|+++||||+++...+.+.+.|++|++||++|+||.+|+.||.+|.+++.+
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~~~ 75 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTG 75 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC----
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccC
Confidence 79999999999999999999999999999999998766678999999999999999999999999999877653
No 12
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.86 E-value=1.2e-22 Score=156.37 Aligned_cols=72 Identities=50% Similarity=0.883 Sum_probs=66.4
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccCCC
Q 019573 2 GVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQ 77 (339)
Q Consensus 2 ~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~ 77 (339)
..|||+||||+++|+.+|||+|||+|+++||||+++.+ .++|++|++||++|+||.+|+.||++|.+++..+
T Consensus 7 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~----~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~~ 78 (92)
T 2o37_A 7 ETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGD----TEKFKEISEAFEILNDPQKREIYDQYGLEAARSG 78 (92)
T ss_dssp CCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCC----HHHHHHHHHHHHHHTSHHHHHHHHHHCHHHHHTT
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCh----HHHHHHHHHHHHHHCCHHHHHHHHHHCHHHhhcc
Confidence 46899999999999999999999999999999999764 3699999999999999999999999999887643
No 13
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.86 E-value=2.1e-22 Score=155.03 Aligned_cols=74 Identities=57% Similarity=1.020 Sum_probs=69.2
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccCC
Q 019573 3 VDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKG 76 (339)
Q Consensus 3 ~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~ 76 (339)
.|||+||||+++|+.++||+|||+|+++||||+++...+.++++|++|++||++|+||.+|+.||++|.+++..
T Consensus 9 ~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~ 82 (92)
T 2dmx_A 9 ANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSWRA 82 (92)
T ss_dssp CCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSSCC
T ss_pred cCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccC
Confidence 68999999999999999999999999999999998765688999999999999999999999999999877653
No 14
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.86 E-value=1.9e-22 Score=150.86 Aligned_cols=71 Identities=52% Similarity=0.855 Sum_probs=66.0
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccc
Q 019573 2 GVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEG 73 (339)
Q Consensus 2 ~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~ 73 (339)
..|||+||||+++|+.++||+|||+|+++||||+++.. +.+.++|++|++||++|+||.+|+.||++|..+
T Consensus 6 ~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~-~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 76 (79)
T 2dn9_A 6 SGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDD-PKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGP 76 (79)
T ss_dssp CSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSC-TTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCCC
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC-HHHHHHHHHHHHHHHHHCCHHHHHHHHhccCcC
Confidence 47899999999999999999999999999999999865 468899999999999999999999999998754
No 15
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.86 E-value=2.5e-22 Score=153.27 Aligned_cols=73 Identities=51% Similarity=0.853 Sum_probs=68.4
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccCC
Q 019573 2 GVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKG 76 (339)
Q Consensus 2 ~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~ 76 (339)
..|||+||||+++|+.+|||+|||+|+++||||+++. +.+.++|++|++||++|+||.+|+.||.+|.+++.+
T Consensus 6 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~--~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~ 78 (88)
T 2ctr_A 6 SGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKS--PDAEAKFREIAEAYETLSDANRRKEYDTLGHSAFTS 78 (88)
T ss_dssp CCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCS--HHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHHHTC
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC--hHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccc
Confidence 4799999999999999999999999999999999985 578899999999999999999999999999887764
No 16
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.85 E-value=6.2e-22 Score=147.69 Aligned_cols=70 Identities=57% Similarity=0.920 Sum_probs=65.5
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccc
Q 019573 2 GVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEG 73 (339)
Q Consensus 2 ~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~ 73 (339)
..|||+||||+++|+.++||+|||+|+++||||+++. ..+.+.|++|++||++|+||.+|+.||++|.++
T Consensus 6 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~--~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 75 (78)
T 2ctp_A 6 SGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHA--PGATEAFKAIGTAYAVLSNPEKRKQYDQFGSGP 75 (78)
T ss_dssp SCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSS--HHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCS
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--ccHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 3689999999999999999999999999999999975 478899999999999999999999999998754
No 17
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.85 E-value=6.2e-22 Score=151.12 Aligned_cols=70 Identities=51% Similarity=0.901 Sum_probs=65.4
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccc
Q 019573 2 GVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEG 73 (339)
Q Consensus 2 ~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~ 73 (339)
..|||+||||+++|+.++||+|||+|+++||||+++. ..+.++|++|++||++|+||.+|+.||++|...
T Consensus 16 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~--~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 85 (88)
T 2cug_A 16 DFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKD--PGAEDRFIQISKAYEILSNEEKRTNYDHYGSGP 85 (88)
T ss_dssp SSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCS--TTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTCC
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC--hhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCCC
Confidence 5799999999999999999999999999999999986 368899999999999999999999999998743
No 18
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.84 E-value=1.7e-21 Score=143.46 Aligned_cols=67 Identities=58% Similarity=0.997 Sum_probs=61.3
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCcc
Q 019573 2 GVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEE 72 (339)
Q Consensus 2 ~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~ 72 (339)
..|||+||||+++|+.++||+|||+|+++||||++++. .+.|++|++||++|+||.+|+.||++|++
T Consensus 7 ~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~----~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 73 (73)
T 2och_A 7 ETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDG----AEQFKQISQAYEVLSDEKKRQIYDQGGEE 73 (73)
T ss_dssp CCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTC----HHHHHHHHHHHHHHTSHHHHHHHHHTC--
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCH----HHHHHHHHHHHHHHCCHHHHHHHHhcCCC
Confidence 36899999999999999999999999999999999753 47899999999999999999999999863
No 19
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.84 E-value=2.3e-21 Score=151.24 Aligned_cols=68 Identities=32% Similarity=0.551 Sum_probs=63.3
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccC
Q 019573 2 GVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYG 70 (339)
Q Consensus 2 ~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g 70 (339)
..|||+||||+++|+.+|||+|||+|+++||||+++.+ +.+.++|++|++||++|+||.+|+.||++.
T Consensus 16 ~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l 83 (99)
T 2yua_A 16 RTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGS-AEAAERFTRISQAYVVLGSATLRRKYDRGL 83 (99)
T ss_dssp SSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSC-SHHHHHHHHHHHHHHHTTSHHHHHHHHHTC
T ss_pred ccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC-HHHHHHHHHHHHHHHHHCCHHHHHHHHHhc
Confidence 46899999999999999999999999999999999765 478899999999999999999999999843
No 20
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.83 E-value=2e-21 Score=154.12 Aligned_cols=73 Identities=52% Similarity=0.948 Sum_probs=67.8
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccC
Q 019573 2 GVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLK 75 (339)
Q Consensus 2 ~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~ 75 (339)
..|||+||||+++|+.+|||+|||+|+++||||+++.+ +.+.++|++|++||++|+||.+|+.||++|..++.
T Consensus 16 ~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~-~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~~ 88 (109)
T 2ctw_A 16 GESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDN-PEAADKFKEINNAHAILTDATKRNIYDKYGSLGLY 88 (109)
T ss_dssp SCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTC-HHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHHHH
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCc-HHHHHHHHHHHHHHHHHcCHHHHHHHHHhcccccc
Confidence 47899999999999999999999999999999999865 57889999999999999999999999999986653
No 21
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.83 E-value=1.2e-21 Score=156.22 Aligned_cols=72 Identities=29% Similarity=0.592 Sum_probs=67.0
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCcccc
Q 019573 2 GVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGL 74 (339)
Q Consensus 2 ~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~ 74 (339)
..|||+||||+++|+.++||+|||+|+++||||+++.+ +.+.++|++|++||++|+||.+|+.||+++..++
T Consensus 19 ~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~ 90 (112)
T 2ctq_A 19 TEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPEN-PKAVETFQKLQKAKEILTNEESRARYDHWRRSQM 90 (112)
T ss_dssp CCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTC-STHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHTC
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-HHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhcc
Confidence 37999999999999999999999999999999999865 4688999999999999999999999999998664
No 22
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.81 E-value=1.2e-20 Score=145.68 Aligned_cols=70 Identities=33% Similarity=0.614 Sum_probs=64.0
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-----hHHHHHHHHHHHHHHhhcCCchhhhhhcccCc
Q 019573 2 GVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNN-----KKDAEAKFKQISEAYDVLSDPQKRAVYDQYGE 71 (339)
Q Consensus 2 ~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~-----~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~ 71 (339)
..|||+||||+++|+.+|||+|||+|+++||||+++.+ ...+.++|++|++||++|+||.+|+.||.+..
T Consensus 15 ~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~ 89 (94)
T 1wjz_A 15 KKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRS 89 (94)
T ss_dssp CSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSC
T ss_pred CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHcc
Confidence 36999999999999999999999999999999998742 25788999999999999999999999999764
No 23
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.78 E-value=8.3e-20 Score=161.08 Aligned_cols=72 Identities=46% Similarity=0.893 Sum_probs=67.7
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccC
Q 019573 3 VDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLK 75 (339)
Q Consensus 3 ~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~ 75 (339)
+|||+||||+++|+.+|||+|||+|+++||||+++.+ +++.++|++|++||++|+||.+|+.||++|..++.
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~-~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~ 73 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNN-PNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLE 73 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTC-TTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCC
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC-hHHHHHHHHHHHHHHHhCCHHHHHHHHHhcccccc
Confidence 6999999999999999999999999999999999765 47889999999999999999999999999987765
No 24
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.78 E-value=5e-20 Score=146.17 Aligned_cols=70 Identities=40% Similarity=0.658 Sum_probs=64.5
Q ss_pred CCCcccccCCCCCC-CHHHHHHHHHHHHHHhCCCCCCC--ChHHHHHHHHHHHHHHhhcCCchhhhhhcccCc
Q 019573 2 GVDYYKILQVDRNA-KEEDLKKAYRKLAMKWHPDKNPN--NKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGE 71 (339)
Q Consensus 2 ~~d~y~iLgv~~~a-~~~eIk~ayr~l~~~~hPd~~~~--~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~ 71 (339)
..|||+||||+++| +.+|||+|||+|+++||||+++. ..+.+.+.|++|++||++|+||.+|+.||+++.
T Consensus 14 ~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~ 86 (109)
T 2qsa_A 14 LENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLD 86 (109)
T ss_dssp TSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred CCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence 47999999999999 99999999999999999999864 235788999999999999999999999999885
No 25
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.76 E-value=2.8e-19 Score=136.86 Aligned_cols=62 Identities=34% Similarity=0.477 Sum_probs=57.8
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhh
Q 019573 2 GVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAV 65 (339)
Q Consensus 2 ~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~ 65 (339)
..|||+||||+++|+.+|||+|||+|+++||||+++. ..+.++|++|++||++|+||.+|+.
T Consensus 26 ~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~--~~~~~~f~~i~~Ay~~L~d~~~R~~ 87 (90)
T 2ys8_A 26 SKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVA--PGSEDAFKAVVNARTALLKNIKSGP 87 (90)
T ss_dssp CSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCC--TTHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC--ccHHHHHHHHHHHHHHHCCcccccC
Confidence 4799999999999999999999999999999999976 3688999999999999999999874
No 26
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.75 E-value=6.6e-19 Score=148.46 Aligned_cols=70 Identities=33% Similarity=0.600 Sum_probs=63.6
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-----HHHHHHHHHHHHHHhhcCCchhhhhhcccCc
Q 019573 2 GVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNK-----KDAEAKFKQISEAYDVLSDPQKRAVYDQYGE 71 (339)
Q Consensus 2 ~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~-----~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~ 71 (339)
..|||+||||+++|+.++||+|||+|+++||||+++... +.|.++|+.|++||++|+||.+|+.||..+.
T Consensus 9 ~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~ 83 (155)
T 2l6l_A 9 KKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRC 83 (155)
T ss_dssp CSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHH
T ss_pred CCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcc
Confidence 468999999999999999999999999999999987642 2578999999999999999999999998764
No 27
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.74 E-value=4.3e-19 Score=134.78 Aligned_cols=62 Identities=29% Similarity=0.478 Sum_probs=57.7
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhh
Q 019573 3 VDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRA 64 (339)
Q Consensus 3 ~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~ 64 (339)
.++|+||||+++|+.+|||+|||+||++||||+++++.+.++++|++|++||++|+|...|.
T Consensus 16 ~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r~ 77 (88)
T 1iur_A 16 KEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFLD 77 (88)
T ss_dssp HHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhcccc
Confidence 57899999999999999999999999999999999876678999999999999999987774
No 28
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.73 E-value=2.2e-19 Score=142.88 Aligned_cols=64 Identities=30% Similarity=0.492 Sum_probs=60.1
Q ss_pred CCcccccCCCCCCCH--HHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCc
Q 019573 3 VDYYKILQVDRNAKE--EDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGE 71 (339)
Q Consensus 3 ~d~y~iLgv~~~a~~--~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~ 71 (339)
.+||+||||+++|+. ++||+|||+||++||||++++ .++|++|++||++|+||.+|+.||.+|.
T Consensus 8 ~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~-----~e~f~~I~~AYevL~d~~~R~~~~~~~~ 73 (114)
T 1gh6_A 8 LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD-----EEKMKKMNTLYKKMEDGVKYAHQPDFGG 73 (114)
T ss_dssp HHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT-----TTTTHHHHHHHHHHHHHHHSCCSSCCSC
T ss_pred hhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc-----HHHHHHHHHHHHHHCCHHHHHHhhhccc
Confidence 579999999999999 999999999999999999975 3689999999999999999999999875
No 29
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.72 E-value=1.4e-18 Score=129.49 Aligned_cols=64 Identities=16% Similarity=0.322 Sum_probs=57.5
Q ss_pred CCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCcc
Q 019573 3 VDYYKILQVDRN--AKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEE 72 (339)
Q Consensus 3 ~d~y~iLgv~~~--a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~ 72 (339)
.++|+||||+++ |+.++||+|||+||++||||++.+ .++|++|++||++|+|+.+|.. +.||..
T Consensus 11 ~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~-----~~~f~~i~~AYe~L~~~~~r~~-~~~g~~ 76 (79)
T 1faf_A 11 ERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS-----HALMQELNSLWGTFKTEVYNLR-MNLGGT 76 (79)
T ss_dssp HHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC-----HHHHHHHHHHHHHHHHHHHHHT-TCCSSC
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-----HHHHHHHHHHHHHHhhHHHHHH-HhcCCc
Confidence 468999999999 999999999999999999999854 3789999999999999999988 557654
No 30
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.71 E-value=5.3e-19 Score=150.19 Aligned_cols=64 Identities=28% Similarity=0.468 Sum_probs=57.4
Q ss_pred CCcccccCCCCCCC--HHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCc
Q 019573 3 VDYYKILQVDRNAK--EEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGE 71 (339)
Q Consensus 3 ~d~y~iLgv~~~a~--~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~ 71 (339)
.|||+||||+++|+ .+|||+|||++|+++|||++++. ++|++|++||++|+||.+|+.||++|.
T Consensus 11 ~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~~-----e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 11 LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDE-----EKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp HHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---CC-----TTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred ccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCCH-----HHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 57999999999998 69999999999999999999753 689999999999999999999999996
No 31
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.69 E-value=1.1e-17 Score=143.29 Aligned_cols=69 Identities=26% Similarity=0.445 Sum_probs=61.5
Q ss_pred CCCcccccCCCCCCC--HHHHHHHHHHHHHHhCCCCCCCChH----HHHHHHHHHHHHHhhcCCchhhhhhcccC
Q 019573 2 GVDYYKILQVDRNAK--EEDLKKAYRKLAMKWHPDKNPNNKK----DAEAKFKQISEAYDVLSDPQKRAVYDQYG 70 (339)
Q Consensus 2 ~~d~y~iLgv~~~a~--~~eIk~ayr~l~~~~hPd~~~~~~~----~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g 70 (339)
..|||+||||+++++ .++||+|||+|+++||||+++.... .|.++|+.|++||++|+||.+|+.||...
T Consensus 3 ~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l 77 (174)
T 3hho_A 3 AMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLSL 77 (174)
T ss_dssp -CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred CCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHc
Confidence 479999999999988 9999999999999999999876421 37789999999999999999999999743
No 32
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.68 E-value=1.1e-17 Score=142.82 Aligned_cols=67 Identities=24% Similarity=0.391 Sum_probs=61.3
Q ss_pred CcccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCCh----HHHHHHHHHHHHHHhhcCCchhhhhhcccC
Q 019573 4 DYYKILQVDRNA--KEEDLKKAYRKLAMKWHPDKNPNNK----KDAEAKFKQISEAYDVLSDPQKRAVYDQYG 70 (339)
Q Consensus 4 d~y~iLgv~~~a--~~~eIk~ayr~l~~~~hPd~~~~~~----~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g 70 (339)
|||+||||++++ +.++||+|||+|+++||||++++.. ..|.++|+.|++||++|+||.+|+.||...
T Consensus 2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l 74 (171)
T 1fpo_A 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSL 74 (171)
T ss_dssp HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHT
T ss_pred CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHh
Confidence 899999999999 9999999999999999999987642 246789999999999999999999999864
No 33
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.68 E-value=1e-17 Score=143.15 Aligned_cols=64 Identities=23% Similarity=0.412 Sum_probs=58.9
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChH--HHHHHHHHHHHHHhhcCCchhhhhh
Q 019573 3 VDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKK--DAEAKFKQISEAYDVLSDPQKRAVY 66 (339)
Q Consensus 3 ~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~--~~~~~f~~i~~Ay~~L~d~~~r~~y 66 (339)
.|||++|||+++|+.++||+|||+|+++||||+++.... .|+++|++|++||++|+||.+|+.|
T Consensus 117 ~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 117 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp CCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred cchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 589999999999999999999999999999999876422 3889999999999999999999987
No 34
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.67 E-value=9.2e-18 Score=127.88 Aligned_cols=57 Identities=23% Similarity=0.362 Sum_probs=51.6
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh--HHHHHHHHHHHHHHhhcCC
Q 019573 3 VDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNK--KDAEAKFKQISEAYDVLSD 59 (339)
Q Consensus 3 ~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~--~~~~~~f~~i~~Ay~~L~d 59 (339)
.++|++|||++.||.+|||+|||++|++||||+|+++. ..|+++|++|++||+||.+
T Consensus 33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 48999999999999999999999999999999998652 2488999999999999974
No 35
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.67 E-value=2.3e-17 Score=144.90 Aligned_cols=67 Identities=25% Similarity=0.454 Sum_probs=60.2
Q ss_pred CCCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCC----hHHHHHHHHHHHHHHhhcCCchhhhhhcc
Q 019573 2 GVDYYKILQVDRN--AKEEDLKKAYRKLAMKWHPDKNPNN----KKDAEAKFKQISEAYDVLSDPQKRAVYDQ 68 (339)
Q Consensus 2 ~~d~y~iLgv~~~--a~~~eIk~ayr~l~~~~hPd~~~~~----~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~ 68 (339)
..|||+||||+++ ++.++||+|||+|+++||||++++. +..|.++|+.|++||++|+||.+|+.||.
T Consensus 42 ~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~ 114 (207)
T 3bvo_A 42 TRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLL 114 (207)
T ss_dssp TCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 3689999999986 7999999999999999999998754 22467899999999999999999999996
No 36
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.65 E-value=2.3e-17 Score=129.66 Aligned_cols=59 Identities=25% Similarity=0.415 Sum_probs=52.0
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC------hHHHHHHHHHHHHHHhhcCCch
Q 019573 2 GVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNN------KKDAEAKFKQISEAYDVLSDPQ 61 (339)
Q Consensus 2 ~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~------~~~~~~~f~~i~~Ay~~L~d~~ 61 (339)
+.|||+||+++. ||.++||+|||++|++||||+|++. ...|+++|++|++||++|+|+.
T Consensus 40 ~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 40 GSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp TSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred cCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 469999999996 9999999999999999999998631 1257899999999999999985
No 37
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.62 E-value=8.5e-17 Score=117.40 Aligned_cols=57 Identities=26% Similarity=0.340 Sum_probs=51.0
Q ss_pred CCcccccCCCC-CCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhh
Q 019573 3 VDYYKILQVDR-NAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRA 64 (339)
Q Consensus 3 ~d~y~iLgv~~-~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~ 64 (339)
.++|+||||++ +|+.+|||+|||+|+++||||++.+ .+.|++|++||++|+++..|+
T Consensus 14 ~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g~-----~~~f~~i~~Aye~L~~~~~rk 71 (71)
T 2guz_A 14 KEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGS-----PFLATKINEAKDFLEKRGISK 71 (71)
T ss_dssp HHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTCC-----HHHHHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-----HHHHHHHHHHHHHHhhhhhcC
Confidence 47899999999 7999999999999999999999743 369999999999999987663
No 38
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.61 E-value=1e-16 Score=137.92 Aligned_cols=64 Identities=25% Similarity=0.515 Sum_probs=58.4
Q ss_pred CCccccc------CCCC-CCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccC
Q 019573 3 VDYYKIL------QVDR-NAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYG 70 (339)
Q Consensus 3 ~d~y~iL------gv~~-~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g 70 (339)
.|||+|| |+++ +|+.++||+|||+|+++||||++++ +.++|+.|++||++|+||.+|+.||...
T Consensus 11 ~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~----a~~~f~~i~~AY~vL~dp~~R~~Yd~~l 81 (181)
T 3uo3_A 11 STFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ----GSEQSSTLNQAYHTLKDPLRRSQYMLKL 81 (181)
T ss_dssp CCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS----CSSGGGSHHHHHHHHHSHHHHHHHHHHH
T ss_pred CCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc----HHHHHHHHHHHHHHHcChHHHHHHHHHH
Confidence 7999999 4665 8999999999999999999999975 5578999999999999999999999843
No 39
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.60 E-value=6e-17 Score=168.93 Aligned_cols=74 Identities=45% Similarity=0.870 Sum_probs=40.9
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccCC
Q 019573 2 GVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKG 76 (339)
Q Consensus 2 ~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~ 76 (339)
+.|||+||||+++||.+|||+|||+||++||||+++.+ +.+.++|++|++||++|+||.+|+.||+||++++..
T Consensus 20 ~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~-~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~~ 93 (780)
T 3apo_A 20 DQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNN-PNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLED 93 (780)
T ss_dssp ---CHHHHTCCTTCCHHHHHHHHCC------------------------CTHHHHHHSHHHHHHHTTC-------
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC-hHHHHHHHHHHHHHHHHcChHHHHHHHhhccccccc
Confidence 57999999999999999999999999999999999755 478899999999999999999999999999887754
No 40
>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}
Probab=99.38 E-value=3e-13 Score=106.72 Aligned_cols=81 Identities=15% Similarity=0.167 Sum_probs=69.4
Q ss_pred ccCCCCeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeeeeeEEEEEeCCCCcCCCEEEecCCCcCCCCCCCccEEEE
Q 019573 159 LRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRNVIPSDLIFI 238 (339)
Q Consensus 159 ~~~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDL~v~ 238 (339)
.|.+.|++++++|||.||+.|++++|... +| .++|.||+|+++|++++++|+|++..+ .+|||||+
T Consensus 8 ~R~G~DL~~~~~Isl~eAl~G~~i~v~tl------dG-------~~~v~ip~g~~~G~~~rl~G~G~p~~~-~~GDL~v~ 73 (109)
T 3i38_A 8 DIVGHNLEIVLPLAPWEAALGAKVTVPTL------KE-------SILLTVPPGSQAGQRLRIKGKGLVSKT-HTGDLFAV 73 (109)
T ss_dssp EEETTEEEEEEEECHHHHHHCEEEEECCS------SS-------CEEEEECTTCCTTCEEEETTCSCBCSS-CBCCEEEE
T ss_pred EEECCEEEEEEEcCHHHHhCCCEEEEEcC------CC-------CEEEeeCCCcCcCeEEEECCccCCCCC-CCcCEEEE
Confidence 46789999999999999999999888765 45 479999999999999999999999854 78999999
Q ss_pred EeecCCCCcccCCCc
Q 019573 239 IDEKPHSLFKRDGND 253 (339)
Q Consensus 239 i~v~~h~~f~r~g~D 253 (339)
|+|.-+..++.+...
T Consensus 74 ~~V~~P~~Ls~~q~~ 88 (109)
T 3i38_A 74 IKIVMPTKPDEKARE 88 (109)
T ss_dssp EEECCCSSCCHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 999977766654433
No 41
>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}
Probab=99.30 E-value=1.5e-12 Score=104.78 Aligned_cols=82 Identities=18% Similarity=0.161 Sum_probs=66.8
Q ss_pred cCCCCeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeeeeeEEEEEeCCC--CcCCCEEEecCCCcCCCCC-CCccEE
Q 019573 160 RKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPG--WKKGTKITFPEKGNELRNV-IPSDLI 236 (339)
Q Consensus 160 ~~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~~~~~~V~Ip~G--~~~G~~i~~~g~G~~~~~~-~~GDL~ 236 (339)
|++.|+++++.|||.+|+.|+++.|... +|+ .++|+||+| +++|++++++|+|++..++ .+||||
T Consensus 4 R~G~DL~~~~~Isl~eAllG~~i~v~tl------dG~------~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~~~GDL~ 71 (121)
T 1xao_A 4 RDGDDLVYEAEIDLLTAIAGGEFALEHV------SGD------WLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLI 71 (121)
T ss_dssp EETTEEEEEEEEEHHHHHHCEEEEEECT------TSC------EEEEEECTTSCCCTTCEEEETTCSCC------CCCEE
T ss_pred EECCeEEEEEEcCHHHHhCCCEEEEecC------CCC------EEEEEeCCCCeeCCCcEEEECCCCCCCCCCCCCCCEE
Confidence 5789999999999999999999888765 663 689999999 9999999999999997443 689999
Q ss_pred EEEeecCCCC--cccCCCc
Q 019573 237 FIIDEKPHSL--FKRDGND 253 (339)
Q Consensus 237 v~i~v~~h~~--f~r~g~D 253 (339)
|++.|.-+.. ++.+..+
T Consensus 72 V~~~V~~P~~~~ls~~q~~ 90 (121)
T 1xao_A 72 IKFTIKFPENHFTSEENLK 90 (121)
T ss_dssp EEEEEECCCTTCSCHHHHH
T ss_pred EEEEEECCCCCCCCHHHHH
Confidence 9999997665 5554433
No 42
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A
Probab=99.09 E-value=8.5e-11 Score=100.08 Aligned_cols=81 Identities=19% Similarity=0.217 Sum_probs=69.4
Q ss_pred ccCCCCeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeeeeeEEEEEeCCCCcCCCEEEecCCCcCCCC--CCCccEE
Q 019573 159 LRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRN--VIPSDLI 236 (339)
Q Consensus 159 ~~~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~--~~~GDL~ 236 (339)
.|.+.|++++++|||.||++|+++.|... +|+ .++|.||+|+++|++++++|+|++..+ +.+||||
T Consensus 83 ~R~G~DL~~~~~Isl~eAllG~~~~v~tl------dG~------~~~i~i~~~t~~g~~~rl~g~G~p~~~~~~~~GDL~ 150 (170)
T 1c3g_A 83 KRDGDDLIYTLPLSFKESLLGFSKTIQTI------DGR------TLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLI 150 (170)
T ss_dssp EEETTEEEEEECCBHHHHHHCEEEEEECS------SSC------EEEEEESSCCCTTCEEECTTCSCBCSSCTTSBCCEE
T ss_pred EEeCCcEeEEEEcCHHHHhCCCeEEeeCC------CCC------EEEEECCCccCCCcEEEEeCCCCCcCCCCCCCCCEE
Confidence 56799999999999999999999888766 563 588999999999999999999999743 3579999
Q ss_pred EEEeecCCCCcccCC
Q 019573 237 FIIDEKPHSLFKRDG 251 (339)
Q Consensus 237 v~i~v~~h~~f~r~g 251 (339)
|+++|.-+..++.+.
T Consensus 151 V~~~V~~P~~Ls~~q 165 (170)
T 1c3g_A 151 VKYKVDYPISLNDAQ 165 (170)
T ss_dssp EEECCBCCSSCCTTH
T ss_pred EEEEEECCCCCCHHH
Confidence 999999776666544
No 43
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A
Probab=99.08 E-value=9.5e-11 Score=100.80 Aligned_cols=81 Identities=19% Similarity=0.206 Sum_probs=69.3
Q ss_pred ccCCCCeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeeeeeEEEEEeCCCCcCCCEEEecCCCcCCCC--CCCccEE
Q 019573 159 LRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRN--VIPSDLI 236 (339)
Q Consensus 159 ~~~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~--~~~GDL~ 236 (339)
.|.+.|++++++|||.||+.|+++.|... +|+ .++|.||+|+++|++++++|+|++..+ +.+||||
T Consensus 89 ~R~G~DL~~~~~Isl~eAllG~~i~v~tl------dG~------~~~i~i~~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~ 156 (181)
T 3agx_A 89 KRDGSDVIYPARISLREALCGCTVNVPTL------DGR------TIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLI 156 (181)
T ss_dssp EEETTEEEEEEEEEHHHHHHCEEEEEECT------TSC------EEEEEECSCCCTTCEEEETTCSCBCSSSTTSBCCEE
T ss_pred eeeCCcEEEEEEcCHHHHhCCCEEEeECC------CCC------EEEEECCCccCCCcEEEECCcCCCcCCCCCCcCCEE
Confidence 56799999999999999999999888765 663 688999999999999999999999743 4579999
Q ss_pred EEEeecCCCCcccCC
Q 019573 237 FIIDEKPHSLFKRDG 251 (339)
Q Consensus 237 v~i~v~~h~~f~r~g 251 (339)
|+++|.-+..++.+.
T Consensus 157 V~~~V~~P~~ls~~q 171 (181)
T 3agx_A 157 IEFEVIFPERIPQTS 171 (181)
T ss_dssp EEEEEECCSCCCHHH
T ss_pred EEEEEECCCCCCHHH
Confidence 999999776665443
No 44
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.06 E-value=8.2e-11 Score=112.45 Aligned_cols=66 Identities=56% Similarity=0.922 Sum_probs=56.9
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh--HHHHHHHHHHHHHHhhcCCchhhhhhcc
Q 019573 3 VDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNK--KDAEAKFKQISEAYDVLSDPQKRAVYDQ 68 (339)
Q Consensus 3 ~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~--~~~~~~f~~i~~Ay~~L~d~~~r~~yd~ 68 (339)
.++|.+||+.+.++.++|+++|+++++++|||+.+... +.+.++|++|++||++|+||.+|..||.
T Consensus 382 ~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~ 449 (450)
T 2y4t_A 382 RDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD 449 (450)
T ss_dssp CCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred hhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence 58999999999999999999999999999999987643 4688999999999999999999999996
No 45
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}
Probab=99.06 E-value=1.3e-10 Score=99.80 Aligned_cols=81 Identities=21% Similarity=0.180 Sum_probs=69.0
Q ss_pred ccCCCCeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeeeeeEEEEEeCCCCcCCCEEEecCCCcCCCC--CCCccEE
Q 019573 159 LRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRN--VIPSDLI 236 (339)
Q Consensus 159 ~~~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~--~~~GDL~ 236 (339)
.|.+.|++++++|||.||++|+++.|... +|+ .++|.||+|+++|++++++|+|++..+ +.+||||
T Consensus 89 ~R~G~DL~~~~~Isl~eAllG~~i~v~tl------dG~------~v~i~ip~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~ 156 (180)
T 2q2g_A 89 TRDDCHLIMKVTIPLVRALTGFTCPVTTL------DNR------NLQIPIKEIVNPKTRKIVPNEGMPIKNQPGQKGDLI 156 (180)
T ss_dssp EEETTEEEEEEEEEHHHHHHCEEEEEECT------TCC------EEEEEECSCCCTTCEEEETTCSCBCSSSTTCBCCEE
T ss_pred EEcCCEEEEEEEcCHHHHhCCCEEEeeCC------CCC------EEEEECCCccCCCEEEEECCcCCCcCCCCCCcCCEE
Confidence 46799999999999999999999888766 663 689999999999999999999999743 4579999
Q ss_pred EEEeecCCCCcccCC
Q 019573 237 FIIDEKPHSLFKRDG 251 (339)
Q Consensus 237 v~i~v~~h~~f~r~g 251 (339)
|+++|.-+..++.+.
T Consensus 157 V~~~V~~P~~Ls~~q 171 (180)
T 2q2g_A 157 LEFDICFPKSLTPEQ 171 (180)
T ss_dssp EEEEEECCSCCCHHH
T ss_pred EEEEEECCCCCCHHH
Confidence 999999766555443
No 46
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=99.02 E-value=2.5e-10 Score=103.01 Aligned_cols=85 Identities=18% Similarity=0.142 Sum_probs=66.7
Q ss_pred cccCCCCeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeeeeeEEEEEeCCC--CcCCCEEEecCCCcCCCCC-CCcc
Q 019573 158 ALRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPG--WKKGTKITFPEKGNELRNV-IPSD 234 (339)
Q Consensus 158 ~~~~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~~~~~~V~Ip~G--~~~G~~i~~~g~G~~~~~~-~~GD 234 (339)
-.|.+.||+++++|||.||++|++++|... +|+ .++|.||+| +++|++++|+|+|++..+. ..||
T Consensus 157 F~R~G~DL~~~~~Isl~eAllG~~i~v~tl------dG~------~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~~~GD 224 (248)
T 1nlt_A 157 FKRDGDDLVYEAEIDLLTAIAGGEFALEHV------SGD------WLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGN 224 (248)
T ss_dssp CEEETTEEEEEEEEEHHHHHHCBCCEEECS------SSC------EEECCBCTTTTCSTTCEEEETTCSCBCSSSCSBCC
T ss_pred ceeeCCEEEEEEEeCHHHHhcCCEEEEeCC------CCC------EEEEEeCCCCeeCCCeEEEEcCCCCccCCCCCcCC
Confidence 357899999999999999999999888776 563 589999999 9999999999999997433 6799
Q ss_pred EEEEEeecCCCC--cccCCCce
Q 019573 235 LIFIIDEKPHSL--FKRDGNDL 254 (339)
Q Consensus 235 L~v~i~v~~h~~--f~r~g~DL 254 (339)
|||+|+|.-+.. ++.+...+
T Consensus 225 L~V~~~V~~P~~~~Ls~~q~~~ 246 (248)
T 1nlt_A 225 LIIKFTIKDPENHFTSEENLKK 246 (248)
T ss_dssp EEEEEEEECCC-----------
T ss_pred EEEEEEEECCCCCCCCHHHHHh
Confidence 999999996665 66555443
No 47
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=98.93 E-value=5.6e-10 Score=104.57 Aligned_cols=80 Identities=15% Similarity=0.162 Sum_probs=69.1
Q ss_pred ccCCCCeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeeeeeEEEEEeCCCCcCCCEEEecCCCcCCCCCCCccEEEE
Q 019573 159 LRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRNVIPSDLIFI 238 (339)
Q Consensus 159 ~~~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDL~v~ 238 (339)
.|.+.||+++++|||.||++|++++|+.. +|+ ++|+||+|+++|++++|+|+|++.. ..+|||||+
T Consensus 228 ~R~G~DL~~~~~Isl~eAllG~~v~VptL------dG~-------v~l~ip~gt~~g~~~rl~G~GmP~~-~~rGDL~v~ 293 (329)
T 3lz8_A 228 DIVGHNLEIVLPLAPWEAALGAKVTVPTL------KES-------ILLTVPPGSQAGQRLRIKGKGLVSK-THTGDLFAV 293 (329)
T ss_dssp EEETTEEEEEEEECHHHHHHCEEEEECCS------SSC-------EEEEECTTCCTTCEEEETTCSCBCS-SCBCCEEEE
T ss_pred EEcCCcEEEEEECCHHHHcCCCeEEEECC------CCC-------EEEEECCCCCCCCEEEEcCCCCCCC-CCCCCEEEE
Confidence 57899999999999999999999888776 562 6899999999999999999999976 468999999
Q ss_pred EeecCCCCcccCCC
Q 019573 239 IDEKPHSLFKRDGN 252 (339)
Q Consensus 239 i~v~~h~~f~r~g~ 252 (339)
|.|.-+...+.+..
T Consensus 294 ~~V~~P~~l~~~q~ 307 (329)
T 3lz8_A 294 IKIVMPTKPDEKAR 307 (329)
T ss_dssp EEECCCSSCCHHHH
T ss_pred EEEECCCCCCHHHH
Confidence 99997666654443
No 48
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.82 E-value=2.2e-09 Score=76.10 Aligned_cols=51 Identities=14% Similarity=0.107 Sum_probs=44.8
Q ss_pred cccccCCCCC---CCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCc
Q 019573 5 YYKILQVDRN---AKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDP 60 (339)
Q Consensus 5 ~y~iLgv~~~---a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~ 60 (339)
-|.||||+++ ++.++|++|||+|....|||+..+ .....+|++|++.|...
T Consensus 6 A~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS-----~yl~~ki~~Ake~l~~~ 59 (65)
T 2guz_B 6 SCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGS-----FYLQSKVYRAAERLKWE 59 (65)
T ss_dssp HHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCC-----HHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCC-----HHHHHHHHHHHHHHHHH
Confidence 4789999999 999999999999999999999743 36778999999998643
No 49
>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=91.64 E-value=0.0098 Score=45.67 Aligned_cols=30 Identities=10% Similarity=0.079 Sum_probs=25.8
Q ss_pred CCeEEEEeeChhhheeCceEEEEEEEEEEc
Q 019573 163 APIERTLPCSLEDLYKGTTKKMKISRDVID 192 (339)
Q Consensus 163 ~d~~~~l~itl~e~~~G~~~~i~~~~~~~~ 192 (339)
.|+.++|.|||+|||+|.+++|.+.+.+.|
T Consensus 2 ~~~~~~l~vslee~~~G~~~~i~~~~~~~C 31 (104)
T 2ctt_A 2 SSGSSGMELTFNQAAKGVNKEFTVNIMDTC 31 (104)
T ss_dssp CCCCCCCCCCCSSCCSSSCTTCCSSCCEEC
T ss_pred CceEEEEEEEHHHHcCCCEEEEEeeeeeEC
Confidence 467788999999999999999998877653
No 50
>2cqn_A Formin-binding protein 3; FF domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.159.2.1
Probab=31.89 E-value=77 Score=22.27 Aligned_cols=56 Identities=9% Similarity=0.272 Sum_probs=38.6
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCCCC-hHHHHHHHHHHHHHHhhcCCc-hhhhhhcccCc
Q 019573 15 AKEEDLKKAYRKLAMKWHPDKNPNN-KKDAEAKFKQISEAYDVLSDP-QKRAVYDQYGE 71 (339)
Q Consensus 15 a~~~eIk~ayr~l~~~~hPd~~~~~-~~~~~~~f~~i~~Ay~~L~d~-~~r~~yd~~g~ 71 (339)
.-...++.+|+.+.+...|...... =+.+..+|..-. +|..+.++ .++.+|+.|-.
T Consensus 6 ~r~rrl~~~F~~mLk~~~p~I~~~s~We~vr~~~e~~~-~fkav~~E~eR~~lFeeYi~ 63 (77)
T 2cqn_A 6 SGMKRKESAFKSMLKQAAPPIELDAVWEDIRERFVKEP-AFEDITLESERKRIFKDFMH 63 (77)
T ss_dssp CSHHHHHHHHHHHHHTCSSCCCTTCCHHHHHHHHTTSH-HHHTCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHccCH-HHHhcCCHHHHHHHHHHHHH
Confidence 3466788899999988888776543 134555555444 89999765 56678888753
No 51
>4a3n_A Transcription factor SOX-17; 2.40A {Homo sapiens} SCOP: a.21.1.0
Probab=31.02 E-value=57 Score=21.82 Aligned_cols=42 Identities=21% Similarity=0.298 Sum_probs=31.1
Q ss_pred HHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcc
Q 019573 21 KKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQ 68 (339)
Q Consensus 21 k~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~ 68 (339)
.+.+|...+.-||+.. ..+.-+.|.+.|..|++.++....+.
T Consensus 14 ~~~~r~~~~~~~p~~~------~~eisk~lg~~Wk~ls~~eK~~y~~~ 55 (71)
T 4a3n_A 14 AKDERKRLAQQNPDLH------NAELSKMLGKSWKALTLAEKRPFVEE 55 (71)
T ss_dssp HHHHHHHHHTTCTTSC------HHHHHHHHHHHHHHSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCC------HHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 4567777788888865 23677889999999997776665554
No 52
>1i11_A Transcription factor SOX-5; HMG BOX, DNA bending, DNA recognition, chromatin, DNA binding protein, DNA sequence specific, testis determining.; NMR {Mus musculus} SCOP: a.21.1.1
Probab=30.89 E-value=82 Score=21.81 Aligned_cols=42 Identities=17% Similarity=0.339 Sum_probs=31.2
Q ss_pred HHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcc
Q 019573 21 KKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQ 68 (339)
Q Consensus 21 k~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~ 68 (339)
.+.+|...+.-||+.. ..+.-+.|.+.|..|++.++...++.
T Consensus 16 ~~~~r~~~~~~~p~~~------~~eisk~lg~~Wk~ls~eeK~~y~~~ 57 (81)
T 1i11_A 16 AKDERRKILQAFPDMH------NSNISKILGSRWKAMTNLEKQPYYEE 57 (81)
T ss_dssp HHHHHHHHHTTCSSCC------HHHHHHHHHHHHTTSCSGGGHHHHHH
T ss_pred HHHHHHHHHHHCCCCC------HHHHHHHHHhhhhhCCHHHHHHHHHH
Confidence 3456777777788764 34677899999999998887766554
No 53
>2pi2_E Replication protein A 14 kDa subunit; FULL-length RPA14/32, ssDNA binding protein, OB-fold, dioxan replication, DNA binding protein; 2.00A {Homo sapiens} SCOP: b.40.4.3 PDB: 2pqa_B 2z6k_C
Probab=28.55 E-value=2.2e+02 Score=22.47 Aligned_cols=63 Identities=11% Similarity=0.078 Sum_probs=46.0
Q ss_pred cCcEEEEecCCCcEEEEEeCC--ccCCCcEEEEccCCCCCCCCCCCCCCEEEEEEEECCCC---CCHHHHHHHHh
Q 019573 267 TGYTVQLTTLDGRTLTVPINS--VISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSK---LTTEQKSGLKR 336 (339)
Q Consensus 267 ~G~~~~i~~~~g~~i~v~i~~--~~~~g~~~rl~g~G~p~~~~~~~~Gdl~v~~~v~~P~~---l~~~~~~~l~~ 336 (339)
.|.++.+.+.||..|+|..++ ....+..+-|-|+--+ .+.+.+.--+.|... ++.+.-+.+-+
T Consensus 58 ~G~~~~l~s~Dg~~VtV~l~~pL~~~~~~~VEViG~V~~-------~~tI~~~~~~~fGd~~~~fD~~~yn~lv~ 125 (142)
T 2pi2_E 58 TGKMFILSDGEGKNGTIELMEPLDEEISGIVEVVGRVTA-------KATILCTSYVQFKEDSHPFDLGLYNEAVK 125 (142)
T ss_dssp TSSEEEEECTTSCEEEEECSSCCSSCCCSEEEEEEEECT-------TSCEEEEEEEECCCSSSCCCHHHHHHHHH
T ss_pred CCCEEEEEeCCCcEEEEEeCCCCCccCCCEEEEEEEECC-------CCcEEEEEEEecCCCccccCHHHHHHHHH
Confidence 678899999999999998865 3455677888887432 367778778899887 88666554433
No 54
>1uzc_A Hypothetical protein FLJ21157; nuclear protein, structure, transcription, phosphopeptide recognition, RNA polymerase II carboxyl- terminal domain; NMR {Homo sapiens} SCOP: a.159.2.1 PDB: 2kzg_A 2lks_A 2l9v_A
Probab=28.42 E-value=63 Score=22.39 Aligned_cols=54 Identities=20% Similarity=0.328 Sum_probs=34.6
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHH--HHHhhcCCch-hhhhhcccC
Q 019573 13 RNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQIS--EAYDVLSDPQ-KRAVYDQYG 70 (339)
Q Consensus 13 ~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~--~Ay~~L~d~~-~r~~yd~~g 70 (339)
..+|.+|.+.+|++|...++-+-.-.. . +..+.|. .-|.+|.++. ++..|+.|-
T Consensus 10 ~~~t~eea~~~F~~LL~e~~V~~~~tW---e-~~~~~i~~DpRY~al~~~~eRk~~F~ey~ 66 (71)
T 1uzc_A 10 TWNTKEEAKQAFKELLKEKRVPSNASW---E-QAMKMIINDPRYSALAKLSEKKQAFNAYK 66 (71)
T ss_dssp CCCSHHHHHHHHHHHHHHTTCCTTCCH---H-HHHHHHHTSGGGGGCSSHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHcCcCCCCCH---H-HHHHHHccCccccccCCHHHHHHHHHHHH
Confidence 357999999999999998864443222 1 1223333 2788888754 555677653
No 55
>2b7e_A PRE-mRNA processing protein PRP40; structural protein; NMR {Saccharomyces cerevisiae} SCOP: a.159.2.1
Probab=28.16 E-value=62 Score=21.66 Aligned_cols=49 Identities=14% Similarity=0.292 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHH---HHHHhhcCC-ch-hhhhhcccC
Q 019573 18 EDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQI---SEAYDVLSD-PQ-KRAVYDQYG 70 (339)
Q Consensus 18 ~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i---~~Ay~~L~d-~~-~r~~yd~~g 70 (339)
+|-.+||.+|.+...=|-+=+ =++..+.| ..-|-+|.| |. +++.|+.|-
T Consensus 3 eEae~aF~~lL~~~~V~s~ws----weqamr~i~i~DPrY~al~d~~~eRK~~Fe~Y~ 56 (59)
T 2b7e_A 3 MEAEKEFITMLKENQVDSTWS----FSRIISELGTRDPRYWMVDDDPLWKKEMFEKYL 56 (59)
T ss_dssp THHHHHHHHHHHHTTCCSSCC----HHHHHHHHHHHCTHHHHSCCCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCCCCCc----HHHHHHHhccCCCccccccCCHHHHHHHHHHHH
Confidence 577899999988876554432 23556666 358999997 76 556788763
No 56
>1hry_A Human SRY; DNA, DNA-binding protein, DNA binding protein/DNA complex; HET: DNA; NMR {Homo sapiens} SCOP: a.21.1.1 PDB: 1hrz_A*
Probab=28.13 E-value=70 Score=21.80 Aligned_cols=42 Identities=14% Similarity=0.264 Sum_probs=30.3
Q ss_pred HHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcc
Q 019573 21 KKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQ 68 (339)
Q Consensus 21 k~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~ 68 (339)
.+.+|...+.-||+.+.. +.-+.|.+.|..|++.++....+.
T Consensus 16 ~~~~r~~~~~~~p~~~~~------eisk~lg~~Wk~ls~~eK~~y~~~ 57 (76)
T 1hry_A 16 SRDQRRKMALENPRMRNS------EISKQLGYQWKMLTEAEKWPFFQE 57 (76)
T ss_dssp HHHHHHHHHHHCSCCSSS------HHHHHHHHHHHTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCcCCCHH------HHHHHHHhHHHhCCHHHHHHHHHH
Confidence 455677777889987633 466889999999997766655443
No 57
>2crj_A SWI/SNF-related matrix-associated actin- dependent regulator of chromatin subfamily...; structural DNA-binding protein BRAF35, DNA-bending; NMR {Mus musculus}
Probab=27.46 E-value=97 Score=22.10 Aligned_cols=42 Identities=19% Similarity=0.229 Sum_probs=31.5
Q ss_pred HHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcc
Q 019573 21 KKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQ 68 (339)
Q Consensus 21 k~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~ 68 (339)
.+.+|...+.-||+.+ ..+.-+.|.+.|..|++.++....+.
T Consensus 19 ~~~~r~~~~~~~p~~~------~~eisk~lg~~Wk~ls~eeK~~Y~~~ 60 (92)
T 2crj_A 19 LNERREQIRTRHPDLP------FPEITKMLGAEWSKLQPAEKQRYLDE 60 (92)
T ss_dssp HHHHHHHHHHHCTTCC------HHHHHHHHHHHHHTCCTTHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 3456777778889865 34677899999999998887766554
No 58
>1wz6_A HMG-box transcription factor BBX; bobby SOX homolog, HMG_BOX domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative; NMR {Mus musculus}
Probab=27.25 E-value=72 Score=22.16 Aligned_cols=42 Identities=24% Similarity=0.272 Sum_probs=31.0
Q ss_pred HHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcc
Q 019573 21 KKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQ 68 (339)
Q Consensus 21 k~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~ 68 (339)
.+.+|...+.-||+.+.. +..+.|.+.|..|++.++....+.
T Consensus 19 ~~~~r~~~~~~~p~~~~~------eisk~lg~~Wk~ls~~eK~~y~~~ 60 (82)
T 1wz6_A 19 CKRHRSLVRQEHPRLDNR------GATKILADWWAVLDPKEKQKYTDM 60 (82)
T ss_dssp HHHHHHHHHHHCSSSCTT------HHHHHHHHHHHTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCHH------HHHHHHHHHHhhCCHHHHHHHHHH
Confidence 456777778889986532 567889999999997776665554
No 59
>1hme_A High mobility group protein fragment-B; DNA-binding; NMR {Rattus norvegicus} SCOP: a.21.1.1 PDB: 1hmf_A 1nhm_A 1nhn_A 1hsm_A 1hsn_A 1j3c_A 1j3d_A 2yqi_A
Probab=24.41 E-value=1.2e+02 Score=20.49 Aligned_cols=42 Identities=17% Similarity=0.192 Sum_probs=30.4
Q ss_pred HHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcc
Q 019573 21 KKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQ 68 (339)
Q Consensus 21 k~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~ 68 (339)
.+.+|...+.-||+.+ ..+..+.|.+.|..|++.++....+.
T Consensus 18 ~~~~r~~~~~~~p~~~------~~eisk~lg~~Wk~ls~~eK~~y~~~ 59 (77)
T 1hme_A 18 CSEYRPKIKGEHPGLS------IGDVAKKLGEMWNNTAADDKQPYEKK 59 (77)
T ss_dssp HHHHHHHHHHHCTTCC------HHHHHHHHHHHHHHSCGGGSHHHHHH
T ss_pred HHHHHHHHHHHCCCCC------HHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 3456666777888754 34678899999999998776655443
No 60
>3f27_D Transcription factor SOX-17; protein-DNA complex, HMG domain, endodermal, activator, DNA- nucleus, transcription regulation, transcrip complex; HET: DNA; 2.75A {Mus musculus} SCOP: a.21.1.1 PDB: 2yul_A
Probab=24.36 E-value=91 Score=21.60 Aligned_cols=42 Identities=21% Similarity=0.298 Sum_probs=31.5
Q ss_pred HHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcc
Q 019573 21 KKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQ 68 (339)
Q Consensus 21 k~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~ 68 (339)
.+.+|...+.-||+.. ..+.-+.|.+.|..|++.++....+.
T Consensus 18 ~~~~r~~~~~~~p~~~------~~eisk~lg~~Wk~ls~~eK~~y~~~ 59 (83)
T 3f27_D 18 AKDERKRLAQQNPDLH------NAELSKMLGKSWKALTLAEKRPFVEE 59 (83)
T ss_dssp HHHHHHHHHHHCSSSC------HHHHHHHHHHHHHHSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCC------HHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 4567778888899865 24677889999999997776665554
No 61
>1ckt_A High mobility group 1 protein; high-mobility group domain, BENT DNA, protein-drug-DNA compl regulation-DNA complex; HET: DNA 5IU; 2.50A {Rattus norvegicus} SCOP: a.21.1.1 PDB: 1j3x_A
Probab=22.31 E-value=1.7e+02 Score=19.37 Aligned_cols=43 Identities=28% Similarity=0.288 Sum_probs=30.3
Q ss_pred HHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcc
Q 019573 22 KAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQ 68 (339)
Q Consensus 22 ~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~ 68 (339)
+..|...+.-||+...+ ..+.-+.|.+.|..|++.++....+.
T Consensus 14 ~~~r~~~~~~~p~~~~~----~~eisk~lg~~Wk~ls~~eK~~y~~~ 56 (71)
T 1ckt_A 14 QTCREEHKKKHPDASVN----FSEFSKKCSERWKTMSAKEKGKFEDM 56 (71)
T ss_dssp HHHHHHHHHHCTTCCCC----HHHHHHHHHHHHHTCCTTTSHHHHHH
T ss_pred HHHHHHHHHHCCCCCCc----HHHHHHHHHHHHhhCCHHHHHHHHHH
Confidence 34556667778986532 24677899999999998877665543
No 62
>1msz_A DNA-binding protein smubp-2; R3H fold; NMR {Homo sapiens} SCOP: d.68.7.1
Probab=21.92 E-value=43 Score=24.25 Aligned_cols=19 Identities=16% Similarity=0.587 Sum_probs=15.6
Q ss_pred EEECCCCCCHHHHHHHHhh
Q 019573 319 NIKFPSKLTTEQKSGLKRL 337 (339)
Q Consensus 319 ~v~~P~~l~~~~~~~l~~~ 337 (339)
.+.||..|+..+|.++.++
T Consensus 35 ~l~FP~sLs~~eR~~IH~l 53 (86)
T 1msz_A 35 QLEFPPSLNSHDRLRVHQI 53 (86)
T ss_dssp EEEECTTCCSHHHHHHHHH
T ss_pred EEEcCCCCCHHHHHHHHHH
Confidence 6789999999998887654
No 63
>2cs1_A PMS1 protein homolog 1; DNA mismatch repair protein PMS1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.87 E-value=97 Score=22.10 Aligned_cols=42 Identities=21% Similarity=0.213 Sum_probs=30.9
Q ss_pred HHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcc
Q 019573 21 KKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQ 68 (339)
Q Consensus 21 k~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~ 68 (339)
.+..|...+.-||+.. ..+.-+.|.+.|..|++.++....+.
T Consensus 19 ~~~~r~~~~~~~p~~~------~~eisk~lg~~Wk~ls~eeK~~y~~~ 60 (92)
T 2cs1_A 19 VQDHRPQFLIENPKTS------LEDATLQIEELWKTLSEEEKLKYEEK 60 (92)
T ss_dssp HHHHHHHHHHHCCSSC------HHHHHHHHHHHHHSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCC------HHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 3456677777888864 24677899999999998777665554
No 64
>3zxf_A Galectin-7; sugar binding protein; 1.38A {Homo sapiens} SCOP: b.29.1.3 PDB: 1bkz_A 2gal_A* 3gal_A* 4gal_A* 5gal_A* 3zxe_A*
Probab=21.57 E-value=1.7e+02 Score=22.57 Aligned_cols=44 Identities=16% Similarity=0.203 Sum_probs=31.4
Q ss_pred EEEEeCCccCCCcEEEEccCCCCCCCC--------CCCCCCEEEEEEEECCC
Q 019573 281 LTVPINSVISPTYEEVIKGEGMPIPKE--------PSKRGNLRIKFNIKFPS 324 (339)
Q Consensus 281 i~v~i~~~~~~g~~~rl~g~G~p~~~~--------~~~~Gdl~v~~~v~~P~ 324 (339)
..-.||.+.++|+.++|+|.=.+..+. .....|+.++|++.|.+
T Consensus 8 ~~~~i~~gl~~G~~i~I~G~v~~~a~rF~Inl~~g~~~~~dialHfnpRf~~ 59 (138)
T 3zxf_A 8 HKSSLPEGIRPGTVLRIRGLVPPNASRFHVNLLCGEEQGSDAALHFNPRLDT 59 (138)
T ss_dssp EEEECTTCCCSSEEEEEEEEECTTCCBEEEEEESSSSTTCCEEEEEEEETTT
T ss_pred EEeecCCCCCCCCEEEEEEEECCCCCEEEEEeeeCCCCCCCEEEEEEEEcCC
Confidence 456788899999999999864332211 11356999999999875
No 65
>1wgf_A Upstream binding factor 1; transcription factor, DNA binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: a.21.1.1
Probab=21.53 E-value=84 Score=22.37 Aligned_cols=43 Identities=12% Similarity=0.163 Sum_probs=31.7
Q ss_pred HHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhccc
Q 019573 21 KKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQY 69 (339)
Q Consensus 21 k~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~ 69 (339)
.+.+|...+.-||+.+ ..+.-+.|.+.|..|++.++....+..
T Consensus 32 ~~~~r~~~k~~~P~~~------~~eisk~lg~~Wk~ls~eeK~~Y~~~A 74 (90)
T 1wgf_A 32 SEEKRRQLQEERPELS------ESELTRLLARMWNDLSEKKKAKYKARE 74 (90)
T ss_dssp HHHTHHHHHHHCTTSC------HHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCC------HHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 3456677777888854 346778999999999987777666654
No 66
>1qqr_A Streptokinase domain B; non-proteolytic, plasminogen activation, fibrinolysis, hydrolase activator; 2.30A {Streptococcus dysgalactiae subsp} SCOP: d.15.5.1 PDB: 1c4p_A
Probab=21.46 E-value=45 Score=26.22 Aligned_cols=30 Identities=20% Similarity=0.279 Sum_probs=24.7
Q ss_pred ccccCCCCCCCHHHHHHHHHHHHHHhCCCC
Q 019573 6 YKILQVDRNAKEEDLKKAYRKLAMKWHPDK 35 (339)
Q Consensus 6 y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~ 35 (339)
+..|-|....+.+|++++=..+..++||+-
T Consensus 35 l~~k~ig~~Its~eL~~~AqeiL~q~hp~Y 64 (138)
T 1qqr_A 35 LKTLAIGDTITSQELLAQAQSILNKNHPGY 64 (138)
T ss_dssp EEEECTTCEEEHHHHHHHHHHHHHHHSTTE
T ss_pred hcccccCcccCHHHHHHHHHHHHHhcCCCc
Confidence 566777778899999998888888888874
No 67
>3nm9_A HMG-D, high mobility group protein D; DNA bending, non-sequence-specific, HMG chromosomal protein; HET: DNA; 2.85A {Drosophila melanogaster} SCOP: a.21.1.1 PDB: 1e7j_A* 1hma_A 1qrv_A*
Probab=21.34 E-value=1.5e+02 Score=19.90 Aligned_cols=38 Identities=13% Similarity=0.216 Sum_probs=28.0
Q ss_pred HHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhc
Q 019573 21 KKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYD 67 (339)
Q Consensus 21 k~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd 67 (339)
.+.+|...+.-||+.. ..+.-+.|.+.|..|++ |..|.
T Consensus 15 ~~~~r~~~~~~~p~~~------~~eisk~lg~~Wk~ls~---K~~y~ 52 (73)
T 3nm9_A 15 LNSARESIKRENPGIK------VTEVAKRGGELWRAMKD---KSEWE 52 (73)
T ss_dssp HHHHHHHHHHHSSSCC------HHHHHHHHHHHHHHCSC---CHHHH
T ss_pred HHHHHHHHHHHCCCCC------HHHHHHHHHHHHHcCCc---hHHHH
Confidence 4556777788899875 24677889999999987 55553
No 68
>4euw_A Transcription factor SOX-9; protein-DNA complex, HMG domain, activator, DNA-binding, NUC transcription; HET: DNA; 2.77A {Homo sapiens}
Probab=21.22 E-value=1e+02 Score=22.70 Aligned_cols=42 Identities=17% Similarity=0.283 Sum_probs=31.8
Q ss_pred HHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcc
Q 019573 21 KKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQ 68 (339)
Q Consensus 21 k~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~ 68 (339)
.+.+|...+.-||+.. ..+.-+.|.+.|..|++.++....+.
T Consensus 41 ~~~~r~~~k~~~P~~~------~~eisk~lg~~Wk~ls~eeK~~Y~~~ 82 (106)
T 4euw_A 41 AQAARRKLADQYPHLH------NAELSKTLGKLWRLLNESEKRPFVEE 82 (106)
T ss_dssp HHHHHHHHHHHCTTSC------HHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 4567777888899765 23678899999999997777666554
No 69
>1ueb_A EF-P, TT0860, elongation factor P; beta barrel, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.65A {Thermus thermophilus} SCOP: b.34.5.2 b.40.4.5 b.40.4.5 PDB: 3huw_V 3huy_V
Probab=21.02 E-value=93 Score=25.81 Aligned_cols=18 Identities=11% Similarity=0.093 Sum_probs=16.5
Q ss_pred EEEEeCCCCcCCCEEEec
Q 019573 204 LTIEIKPGWKKGTKITFP 221 (339)
Q Consensus 204 ~~V~Ip~G~~~G~~i~~~ 221 (339)
+.|.||.-+..|++|++.
T Consensus 157 ~~v~VP~fi~~Gd~I~vd 174 (184)
T 1ueb_A 157 AVVQVPLFVEPGEVIKVD 174 (184)
T ss_dssp CEEEEETTCCTTCEEEEE
T ss_pred CEEEeCCcCcCCCEEEEE
Confidence 689999999999999985
No 70
>2wkk_A Galectin-2; sugar-binding protein, secreted, cell WALL, sugar binding, sugar binding protein, beta-galactoside binding lectin, fruiting BODY; HET: GAL NAG FUC; 1.50A {Coprinopsis cinerea} PDB: 1ulc_A* 1ul9_A* 1ule_A* 1ulf_A* 1ulg_A* 1uld_A*
Probab=20.24 E-value=1.9e+02 Score=22.91 Aligned_cols=43 Identities=14% Similarity=0.193 Sum_probs=29.0
Q ss_pred EEEeCCccCCCcEEEEccCCCCCCCCC------CCCCCEEEEEEEECCC
Q 019573 282 TVPINSVISPTYEEVIKGEGMPIPKEP------SKRGNLRIKFNIKFPS 324 (339)
Q Consensus 282 ~v~i~~~~~~g~~~rl~g~G~p~~~~~------~~~Gdl~v~~~v~~P~ 324 (339)
.+.||.+..+|+.++|.|.=.+...+. ...+|+.++|++.|.+
T Consensus 10 ~~~ip~gl~~G~~i~I~G~~~~~~a~rF~INl~~g~~dialHfnpRf~~ 58 (150)
T 2wkk_A 10 QVKLQNDFKPESVAAIRSSAFNSKGGTTVFNFLSAGENILLHISIRPGE 58 (150)
T ss_dssp EEEEEEEECTTCEEEEECSCCCTTCCCEEEEEECTTCCEEEEEEEETTT
T ss_pred ceecCCCCcCCCEEEEEEEECCCCCCEEEEEEecCCCCEEEEEeeecCC
Confidence 567778899999999988422211111 1234999999999874
No 71
>1gt0_D Transcription factor SOX-2; POU factors, SOX proteins; 2.6A {Mus musculus} SCOP: a.21.1.1 PDB: 2le4_A 1o4x_B
Probab=20.14 E-value=1.1e+02 Score=21.03 Aligned_cols=42 Identities=19% Similarity=0.365 Sum_probs=30.3
Q ss_pred HHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcc
Q 019573 21 KKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQ 68 (339)
Q Consensus 21 k~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~ 68 (339)
.+.+|...+.-||+.+ ..+.-+.|.+.|..|++.++....+.
T Consensus 14 ~~~~r~~~~~~~p~~~------~~eisk~lg~~Wk~ls~eeK~~y~~~ 55 (80)
T 1gt0_D 14 SRGQRRKMAQENPKMH------NSEISKRLGAEWKLLSETEKRPFIDE 55 (80)
T ss_dssp HHHHHHHHHTTSTTSC------HHHHHHHHHHHHTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCC------HHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 3456666777788754 34677899999999998777665554
Done!