BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 019578
         (339 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q5RBW0|SETD9_PONAB SET domain-containing protein 9 OS=Pongo abelii GN=SETD9 PE=2 SV=1
          Length = 273

 Score = 45.1 bits (105), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 36/163 (22%)

Query: 108 AGQGLFLC-GEANVGAVIAIYPGII---YSPAYYRYIPGYPRVDAQNPYLITRYDGTVIN 163
           AG+G+F+  G    GAV+++YPG +   Y P +++ I         NP++    DG +I+
Sbjct: 108 AGKGVFVTKGLVPKGAVVSMYPGTVYQKYEPIFFQSIG--------NPFIFRCLDGVLID 159

Query: 164 AQPWGSGWDTRELWDGLTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRN 223
               G         +G        +  G  K SD  W L S               E  N
Sbjct: 160 GNDKGISKVVYRSCNG-------RDRLGPLKMSDSTW-LTS---------------EIHN 196

Query: 224 PLALAHFANHPAKGMVPNVMICPYDFP-LTEKDMRPYIPNISF 265
           PLA+  + N+ +     NV    +D P +   +++ Y+PNI++
Sbjct: 197 PLAVGQYVNNCSNDRAANVCYQEFDVPAVFPIELKQYLPNIAY 239


>sp|Q8NE22|SETD9_HUMAN SET domain-containing protein 9 OS=Homo sapiens GN=SETD9 PE=2 SV=2
          Length = 299

 Score = 45.1 bits (105), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 74/172 (43%), Gaps = 36/172 (20%)

Query: 108 AGQGLFLC-GEANVGAVIAIYPGIIYS---PAYYRYIPGYPRVDAQNPYLITRYDGTVIN 163
           AG+G+F+  G    GAV+++YPG +Y    P +++ I         NP++    DG +I+
Sbjct: 134 AGKGVFVTKGLVPKGAVVSMYPGTVYQKYEPIFFQSIG--------NPFIFRCLDGVLID 185

Query: 164 AQPWGSGWDTRELWDGLTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRN 223
               G         +G        +  G  K SD  W L S               E  N
Sbjct: 186 GNDKGISKVVYRSCNG-------RDRLGPLKMSDSTW-LTS---------------EIHN 222

Query: 224 PLALAHFANHPAKGMVPNVMICPYDFP-LTEKDMRPYIPNISFGNAEEVNMR 274
           PLA+  + N+ +     NV    +D P +   +++ Y+PNI++   ++  +R
Sbjct: 223 PLAVGQYVNNCSNDRAANVCYQEFDVPAVFPIELKQYLPNIAYSYDKQSPLR 274


>sp|Q9LDJ9|FB133_ARATH F-box protein At3g03040 OS=Arabidopsis thaliana GN=At3g03040 PE=2
           SV=1
          Length = 472

 Score = 37.7 bits (86), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)

Query: 259 YIPNISFGNAEEVNMRRFGSFWFKWGSGS-GSSTPVLKTLALVATRAICDEEV 310
           Y+P   F +   VN++   +F   W  G+ G+S P+LK+L +   R  CD+E+
Sbjct: 126 YLPEELFVSETLVNLKLKSAFNIDWWPGAEGTSLPMLKSLCVYGVRVFCDDEL 178


>sp|B5BP48|YP54_SCHPO Putative alpha-ketoglutarate-dependent sulfonate dioxygenase
           OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
           GN=SPBC460.04c PE=3 SV=1
          Length = 391

 Score = 35.0 bits (79), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 5/46 (10%)

Query: 105 HEEAGQGLFLCGEANVGAVIAIYP-----GIIYSPAYYRYIPGYPR 145
           H  +GQ + L G+ N   ++  +P      +  SP + RYIPG PR
Sbjct: 267 HRRSGQHVRLDGDTNAHPIVRTHPVTGWKSLFISPGFTRYIPGIPR 312


>sp|P23196|APEX1_BOVIN DNA-(apurinic or apyrimidinic site) lyase OS=Bos taurus GN=APEX1
           PE=1 SV=2
          Length = 318

 Score = 32.7 bits (73), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 51/126 (40%), Gaps = 13/126 (10%)

Query: 196 SDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHPAKGMVPNVMICPYD-FPLTEK 254
           S Q+W   S P D K G SG  +L R+ PL +++            V++  YD F L   
Sbjct: 115 SHQYW---SAPSD-KEGYSGVGLLSRQCPLKVSYGIGEEEHDQEGRVIVAEYDAFVL--- 167

Query: 255 DMRPYIPNISFGNAEEVNMRRFGSFWFKWGSGSGSSTPVLKTLALVATRAICDEEVLLNY 314
            +  Y+PN   G       +R+   + K+  G  S  P    L L     +  EE+ L  
Sbjct: 168 -VTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLASRKP----LVLCGDLNVAHEEIDLRN 222

Query: 315 RLSNSK 320
              N K
Sbjct: 223 PKGNKK 228


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.317    0.135    0.415 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 135,411,471
Number of Sequences: 539616
Number of extensions: 6083441
Number of successful extensions: 12412
Number of sequences better than 100.0: 10
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 12409
Number of HSP's gapped (non-prelim): 10
length of query: 339
length of database: 191,569,459
effective HSP length: 118
effective length of query: 221
effective length of database: 127,894,771
effective search space: 28264744391
effective search space used: 28264744391
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)