Query 019580
Match_columns 339
No_of_seqs 189 out of 1515
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 03:59:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019580.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019580hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2w1v_A Nitrilase-2, nitrilase 100.0 1.5E-56 5.1E-61 410.1 29.3 271 60-336 2-272 (276)
2 1f89_A 32.5 kDa protein YLR351 100.0 5.3E-56 1.8E-60 409.4 28.6 275 58-336 7-288 (291)
3 3p8k_A Hydrolase, carbon-nitro 100.0 6.6E-55 2.3E-59 400.1 28.2 260 60-334 19-281 (281)
4 3hkx_A Amidase; alpha-beta-BET 100.0 6.3E-54 2.1E-58 394.0 18.3 261 60-336 19-282 (283)
5 3ivz_A Nitrilase; alpha-beta s 100.0 7E-53 2.4E-57 382.9 23.4 253 62-335 2-262 (262)
6 1ems_A Nitfhit, NIT-fragIle hi 100.0 7.4E-53 2.5E-57 409.7 20.2 272 60-336 13-288 (440)
7 2e11_A Hydrolase; dimethylarse 100.0 4.9E-52 1.7E-56 378.1 23.2 259 60-335 2-266 (266)
8 1uf5_A N-carbamyl-D-amino acid 100.0 1.5E-50 5E-55 375.0 24.9 273 60-339 2-303 (303)
9 2vhh_A CG3027-PA; hydrolase; 2 100.0 2.1E-50 7E-55 387.3 24.6 268 60-336 71-369 (405)
10 2dyu_A Formamidase; AMIF, CEK, 100.0 1.3E-46 4.5E-51 352.9 28.2 251 60-327 12-275 (334)
11 2uxy_A Aliphatic amidase; nitr 100.0 9.1E-47 3.1E-51 354.8 25.5 252 59-325 10-273 (341)
12 3ilv_A Glutamine-dependent NAD 100.0 3.8E-44 1.3E-48 361.3 23.0 251 60-323 4-276 (634)
13 3n05_A NH(3)-dependent NAD(+) 100.0 5.2E-44 1.8E-48 358.4 22.7 245 59-315 2-263 (590)
14 4f4h_A Glutamine dependent NAD 100.0 8.5E-43 2.9E-47 346.7 24.7 242 61-313 6-266 (565)
15 3sdb_A Glutamine-dependent NAD 100.0 4.8E-42 1.6E-46 347.7 22.0 258 60-329 11-294 (680)
16 3p8k_A Hydrolase, carbon-nitro 82.4 1.7 5.9E-05 38.4 5.5 68 88-170 177-245 (281)
17 3hkx_A Amidase; alpha-beta-BET 81.8 6.2 0.00021 34.7 8.9 70 224-296 47-128 (283)
18 1f89_A 32.5 kDa protein YLR351 78.6 6.2 0.00021 34.7 7.8 68 229-296 43-125 (291)
19 2w1v_A Nitrilase-2, nitrilase 76.7 2.6 8.8E-05 37.0 4.7 71 87-169 163-233 (276)
20 2dyu_A Formamidase; AMIF, CEK, 76.4 4.1 0.00014 37.0 6.1 71 85-169 174-244 (334)
21 2uxy_A Aliphatic amidase; nitr 76.1 4 0.00014 37.2 5.9 71 85-170 174-245 (341)
22 2vhh_A CG3027-PA; hydrolase; 2 75.4 7.4 0.00025 36.4 7.7 73 222-295 104-193 (405)
23 4f4h_A Glutamine dependent NAD 75.1 3.2 0.00011 40.7 5.3 73 86-170 178-250 (565)
24 3ivz_A Nitrilase; alpha-beta s 74.2 5.1 0.00017 34.8 5.9 67 86-170 155-222 (262)
25 2e11_A Hydrolase; dimethylarse 70.7 6.7 0.00023 34.0 5.9 63 93-170 165-229 (266)
26 3n05_A NH(3)-dependent NAD(+) 69.9 9.6 0.00033 37.5 7.4 71 87-170 174-245 (590)
27 1ems_A Nitfhit, NIT-fragIle hi 69.3 12 0.00041 35.1 7.7 72 223-296 39-124 (440)
28 1uf5_A N-carbamyl-D-amino acid 64.6 15 0.00053 32.2 7.1 80 87-170 181-260 (303)
29 3obe_A Sugar phosphate isomera 62.9 23 0.0008 31.2 8.0 75 60-141 88-168 (305)
30 3ngf_A AP endonuclease, family 55.7 56 0.0019 27.8 9.0 76 61-141 61-149 (269)
31 1iuq_A Glycerol-3-phosphate ac 53.1 26 0.0009 32.1 6.4 65 74-140 204-271 (367)
32 1k77_A EC1530, hypothetical pr 49.7 90 0.0031 26.0 9.3 78 60-141 52-142 (260)
33 3tva_A Xylose isomerase domain 43.8 39 0.0013 29.1 6.0 61 75-141 97-157 (290)
34 3cqj_A L-ribulose-5-phosphate 42.9 66 0.0023 27.7 7.4 77 61-141 79-165 (295)
35 3ilv_A Glutamine-dependent NAD 41.8 22 0.00076 35.2 4.5 72 87-170 176-247 (634)
36 2j6v_A UV endonuclease, UVDE; 41.7 27 0.00092 31.1 4.6 65 76-142 57-122 (301)
37 3dx5_A Uncharacterized protein 41.3 1.1E+02 0.0037 26.0 8.6 77 60-141 60-141 (286)
38 3cny_A Inositol catabolism pro 38.8 57 0.002 28.0 6.3 81 61-141 68-159 (301)
39 3fdb_A Beta C-S lyase, putativ 38.4 60 0.0021 28.7 6.6 43 89-141 146-188 (377)
40 1g6h_A High-affinity branched- 37.9 79 0.0027 27.0 7.0 71 85-169 163-233 (257)
41 1c7n_A Cystalysin; transferase 37.2 56 0.0019 29.3 6.2 40 92-141 163-202 (399)
42 1t71_A Phosphatase, conserved 35.8 1.4E+02 0.0047 26.2 8.2 74 195-273 104-186 (281)
43 3bdk_A D-mannonate dehydratase 35.7 1.2E+02 0.0042 27.8 8.2 42 60-101 76-125 (386)
44 3gfo_A Cobalt import ATP-bindi 35.6 75 0.0026 27.6 6.5 74 85-171 153-226 (275)
45 1d2f_A MALY protein; aminotran 35.2 68 0.0023 28.7 6.5 39 93-141 162-200 (390)
46 2z06_A Putative uncharacterize 34.2 1.3E+02 0.0046 25.8 7.7 74 194-273 92-173 (252)
47 2hk0_A D-psicose 3-epimerase; 33.8 1.1E+02 0.0038 26.5 7.4 65 76-141 103-169 (309)
48 1vyb_A ORF2 contains A reverse 33.7 53 0.0018 26.8 5.1 43 57-103 3-45 (238)
49 4fva_A 5'-tyrosyl-DNA phosphod 33.6 32 0.0011 28.5 3.6 39 61-102 11-53 (256)
50 1vp4_A Aminotransferase, putat 33.2 1E+02 0.0035 28.0 7.4 53 79-141 169-226 (425)
51 3nra_A Aspartate aminotransfer 33.2 79 0.0027 28.3 6.6 39 93-141 179-217 (407)
52 3dzz_A Putative pyridoxal 5'-p 32.7 74 0.0025 28.3 6.2 41 92-142 159-199 (391)
53 3op7_A Aminotransferase class 32.3 69 0.0024 28.4 5.9 42 91-142 152-193 (375)
54 1i60_A IOLI protein; beta barr 32.3 94 0.0032 26.1 6.6 78 60-141 58-141 (278)
55 3l23_A Sugar phosphate isomera 31.8 97 0.0033 26.9 6.7 74 60-140 71-163 (303)
56 3kax_A Aminotransferase, class 31.6 74 0.0025 28.2 6.0 42 91-142 154-195 (383)
57 4f1h_A Tyrosyl-DNA phosphodies 31.5 50 0.0017 26.6 4.5 40 60-102 2-43 (250)
58 3qxb_A Putative xylose isomera 30.8 36 0.0012 29.9 3.6 65 76-140 110-176 (316)
59 3tui_C Methionine import ATP-b 30.6 39 0.0013 31.0 3.8 73 86-171 174-246 (366)
60 1iay_A ACC synthase 2, 1-amino 30.4 1.2E+02 0.0041 27.4 7.4 53 79-141 172-226 (428)
61 2q02_A Putative cytoplasmic pr 30.2 1.8E+02 0.0062 24.2 8.1 73 60-141 63-138 (272)
62 3ff4_A Uncharacterized protein 30.0 41 0.0014 25.5 3.3 42 79-140 68-109 (122)
63 2zc0_A Alanine glyoxylate tran 29.4 1.3E+02 0.0043 27.0 7.3 53 79-141 158-213 (407)
64 3tif_A Uncharacterized ABC tra 29.4 60 0.002 27.4 4.7 73 85-171 155-227 (235)
65 3kws_A Putative sugar isomeras 28.8 1.6E+02 0.0055 25.0 7.5 78 60-141 76-164 (287)
66 3qc0_A Sugar isomerase; TIM ba 28.6 69 0.0024 27.0 5.0 78 61-141 58-141 (275)
67 3rri_A Glyoxalase/bleomycin re 28.6 1.7E+02 0.0057 21.2 7.3 48 123-171 79-126 (135)
68 3hp4_A GDSL-esterase; psychrot 28.4 1.1E+02 0.0038 23.7 6.0 70 62-140 67-141 (185)
69 4hf7_A Putative acylhydrolase; 28.3 1.2E+02 0.004 24.6 6.2 76 63-140 80-164 (209)
70 2yz2_A Putative ABC transporte 27.7 1.3E+02 0.0044 25.8 6.7 71 85-169 148-218 (266)
71 2ihy_A ABC transporter, ATP-bi 27.5 97 0.0033 26.9 5.8 72 85-170 171-244 (279)
72 2him_A L-asparaginase 1; hydro 27.4 2.3E+02 0.0077 25.7 8.4 66 206-273 229-295 (358)
73 1gd9_A Aspartate aminotransfer 27.2 91 0.0031 27.7 5.8 40 92-141 159-198 (389)
74 2o0r_A RV0858C (N-succinyldiam 26.9 92 0.0031 28.1 5.8 40 92-141 159-198 (411)
75 1vli_A Spore coat polysacchari 26.8 78 0.0027 29.2 5.1 69 74-142 38-120 (385)
76 2x5d_A Probable aminotransfera 26.8 68 0.0023 29.0 4.9 44 88-141 167-210 (412)
77 3l8a_A METC, putative aminotra 26.7 1E+02 0.0034 28.0 6.1 40 92-141 193-232 (421)
78 4g1u_C Hemin import ATP-bindin 26.7 62 0.0021 28.0 4.3 67 93-172 165-231 (266)
79 3u0h_A Xylose isomerase domain 26.6 95 0.0032 26.2 5.6 77 60-141 59-140 (281)
80 3g0t_A Putative aminotransfera 26.5 1.3E+02 0.0043 27.3 6.7 42 91-142 180-221 (437)
81 3g12_A Putative lactoylglutath 26.4 1.4E+02 0.0047 21.9 5.9 42 125-172 77-119 (128)
82 3ayv_A Putative uncharacterize 26.1 1.1E+02 0.0039 25.4 5.9 64 76-141 72-135 (254)
83 1wdu_A TRAS1 ORF2P; four-layer 25.9 65 0.0022 26.8 4.3 36 64-103 20-55 (245)
84 2yxo_A Histidinol phosphatase; 25.7 1.3E+02 0.0046 25.2 6.4 59 82-143 18-79 (267)
85 3piu_A 1-aminocyclopropane-1-c 25.4 1.4E+02 0.0047 27.2 6.8 54 79-142 175-230 (435)
86 1t70_A Phosphatase; crystal, X 25.4 3E+02 0.01 23.6 8.4 74 195-273 96-176 (255)
87 1u08_A Hypothetical aminotrans 25.0 98 0.0033 27.5 5.6 40 92-141 162-201 (386)
88 3rjt_A Lipolytic protein G-D-S 24.5 2.2E+02 0.0074 22.4 7.2 61 75-140 112-172 (216)
89 2qw5_A Xylose isomerase-like T 24.5 1.7E+02 0.0056 25.7 6.9 65 76-141 105-182 (335)
90 1o7j_A L-asparaginase; atomic 24.3 2.4E+02 0.0083 25.1 7.9 65 206-273 217-281 (327)
91 1nmo_A Hypothetical protein YB 24.3 1.6E+02 0.0053 25.1 6.4 58 210-269 37-97 (247)
92 2zyj_A Alpha-aminodipate amino 24.3 67 0.0023 28.8 4.3 39 93-141 162-201 (397)
93 1bw0_A TAT, protein (tyrosine 24.3 80 0.0027 28.5 4.9 40 92-141 176-215 (416)
94 1o4s_A Aspartate aminotransfer 24.0 84 0.0029 28.1 4.9 40 92-141 173-212 (389)
95 3ey7_A Biphenyl-2,3-DIOL 1,2-d 24.0 1.3E+02 0.0045 21.5 5.3 45 125-171 84-128 (133)
96 3lmz_A Putative sugar isomeras 24.0 1E+02 0.0034 25.9 5.2 58 61-141 74-131 (257)
97 3fsl_A Aromatic-amino-acid ami 23.9 1.7E+02 0.0059 25.9 7.1 41 92-142 172-212 (397)
98 2wlt_A L-asparaginase; hydrola 23.8 2.6E+02 0.0089 24.9 8.1 65 206-273 218-282 (332)
99 3vni_A Xylose isomerase domain 23.6 1.8E+02 0.0061 24.7 6.9 65 76-140 84-149 (294)
100 1ajs_A Aspartate aminotransfer 23.4 1.4E+02 0.0048 26.7 6.4 40 93-142 183-222 (412)
101 4f4e_A Aromatic-amino-acid ami 23.3 1.6E+02 0.0056 26.5 6.8 41 92-142 194-234 (420)
102 1wsa_A Asparaginase, asparagin 23.1 2.7E+02 0.0092 24.8 8.0 65 206-273 215-279 (330)
103 4dq6_A Putative pyridoxal phos 23.1 1.1E+02 0.0038 27.0 5.6 20 123-142 184-203 (391)
104 3ftb_A Histidinol-phosphate am 23.0 1E+02 0.0036 26.9 5.3 39 94-142 145-183 (361)
105 1k7c_A Rhamnogalacturonan acet 22.8 2.7E+02 0.0092 22.8 7.6 57 79-140 111-167 (233)
106 3teb_A Endonuclease/exonucleas 22.7 80 0.0027 26.2 4.2 41 60-103 2-44 (266)
107 3p94_A GDSL-like lipase; serin 22.3 2.2E+02 0.0074 22.2 6.8 75 62-140 75-159 (204)
108 3aow_A Putative uncharacterize 22.2 2E+02 0.0068 26.4 7.3 39 93-141 216-255 (448)
109 3dmy_A Protein FDRA; predicted 22.2 1.2E+02 0.0042 28.8 5.7 44 80-140 47-90 (480)
110 1vpl_A ABC transporter, ATP-bi 22.1 1.3E+02 0.0044 25.8 5.4 70 86-169 157-226 (256)
111 4h41_A Putative alpha-L-fucosi 22.0 1.7E+02 0.0057 26.5 6.3 63 81-144 55-121 (340)
112 1nns_A L-asparaginase II; amid 22.0 2.9E+02 0.0099 24.6 8.0 65 206-273 211-275 (326)
113 1ivn_A Thioesterase I; hydrola 21.5 2.1E+02 0.0073 22.2 6.5 70 62-140 63-137 (190)
114 2yyb_A Hypothetical protein TT 21.4 2.1E+02 0.007 24.3 6.6 49 83-141 47-95 (242)
115 2ei9_A Non-LTR retrotransposon 21.3 70 0.0024 26.9 3.6 37 61-103 7-43 (240)
116 1xi9_A Putative transaminase; 21.3 1E+02 0.0034 27.8 4.9 19 123-141 194-212 (406)
117 3nxk_A Cytoplasmic L-asparagin 21.2 2.8E+02 0.0097 24.8 7.7 65 206-273 220-285 (334)
118 4e38_A Keto-hydroxyglutarate-a 21.1 85 0.0029 26.7 4.0 37 85-143 98-134 (232)
119 2pcj_A ABC transporter, lipopr 21.1 1E+02 0.0034 25.7 4.5 68 86-168 151-218 (224)
120 1oxx_K GLCV, glucose, ABC tran 20.9 1E+02 0.0036 27.8 4.8 73 85-170 150-222 (353)
121 2w0m_A SSO2452; RECA, SSPF, un 20.9 1.8E+02 0.0061 23.4 6.0 44 91-142 119-164 (235)
122 1lc5_A COBD, L-threonine-O-3-p 20.9 1.1E+02 0.0039 26.8 5.1 41 92-142 145-185 (364)
123 7aat_A Aspartate aminotransfer 20.8 1.5E+02 0.0053 26.3 6.1 40 92-141 174-213 (401)
124 1j32_A Aspartate aminotransfer 20.6 1.3E+02 0.0044 26.7 5.5 20 123-142 183-202 (388)
125 1nnw_A Hypothetical protein; s 20.6 1.2E+02 0.0041 25.2 5.0 54 79-143 14-72 (252)
126 1yiz_A Kynurenine aminotransfe 20.6 1.3E+02 0.0043 27.3 5.5 19 123-141 202-220 (429)
127 4hs4_A Chromate reductase; tri 20.6 2.5E+02 0.0084 22.8 6.7 78 58-141 3-80 (199)
128 1b5p_A Protein (aspartate amin 20.5 1E+02 0.0036 27.4 4.8 19 123-141 184-202 (385)
129 2olj_A Amino acid ABC transpor 20.2 86 0.003 27.0 3.9 70 86-169 170-239 (263)
No 1
>2w1v_A Nitrilase-2, nitrilase homolog 2; hydrolase; 1.49A {Mus musculus}
Probab=100.00 E-value=1.5e-56 Score=410.07 Aligned_cols=271 Identities=34% Similarity=0.570 Sum_probs=250.3
Q ss_pred cccEEEEEEecCcCCHHHHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEE
Q 019580 60 SSVRVAVAQMTSINDLAANFATSSRLVKEAASAGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWL 139 (339)
Q Consensus 60 ~~~rVA~vQ~~~~~d~~~n~~~~~~~i~~A~~~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~i 139 (339)
++||||++|+++.+|++.|++++.+++++|.++|+|||||||++ ++||...+....++.++++.++.|+++|++++++|
T Consensus 2 ~~~~va~vQ~~~~~d~~~n~~~~~~~i~~a~~~gadlvv~PE~~-~~gy~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~i 80 (276)
T 2w1v_A 2 STFRLALIQLQVSSIKSDNLTRACSLVREAAKQGANIVSLPECF-NSPYGTTYFPDYAEKIPGESTQKLSEVAKESSIYL 80 (276)
T ss_dssp CEEEEEEEECCCCSCHHHHHHHHHHHHHHHHHTTCSEEECCTTT-TSCCSTTTHHHHCBCSSSHHHHHHHHHHHHHTSEE
T ss_pred CccEEEEEeccccCCHHHHHHHHHHHHHHHHHCCCCEEEcCCCc-ccCCCHHHHHHHhccCCCHHHHHHHHHHHHcCeEE
Confidence 46999999999889999999999999999999999999999997 58888777767777777899999999999999999
Q ss_pred EEeeeeeecCCCCceEEEEEEEcCCCceeeeeeecccccccCCCCCcccccccccCCCceEEEecCCcceEEEeeccCcc
Q 019580 140 SLGGFQEKGSDDAHLCNTHVLVDDAGNIRSTYRKMHLFDVDIPGGRSYKESSFTEAGKDIVAVDSPVGRLGPTVCYDLRF 219 (339)
Q Consensus 140 v~Gs~~e~~~~~~~~yNsa~li~p~G~v~~~y~K~~L~~~~vP~~~~~~E~~~~~~G~~~~vf~~~~~kigv~IC~D~~~ 219 (339)
++|++.++ +++++||++++++|+|++++.|+|+|||+.++|+++.+.|..+|++|+++.+|+++++|+|++||||++|
T Consensus 81 v~G~~~~~--~~~~~yNs~~~i~~~G~i~~~y~K~hL~~~~vP~~e~~~E~~~f~~G~~~~v~~~~~~~ig~~ICyD~~f 158 (276)
T 2w1v_A 81 IGGSIPEE--DAGKLYNTCSVFGPDGSLLVKHRKIHLFDIDVPGKITFQESKTLSPGDSFSTFDTPYCKVGLGICYDMRF 158 (276)
T ss_dssp ECCCEEEE--ETTEEEEEEEEECTTSCEEEEEECSSCCEEEETTTEEEEGGGTCCCCCCCCEEECSSCEEEECCGGGGGC
T ss_pred Eecceeec--CCCcEEEEEEEECCCCcEEEEEecccccCcccCccccccccccccCCCCceeEEeCCceEEEEEEecccc
Confidence 99977765 3568999999999999999999999999887899988899999999999999999999999999999999
Q ss_pred hHHHHHHHhcCCceEEEEeCCCCCCCcHHHHHHHHHHHHHhcCcEEEEECCccCCCCCCCcceeeEEECCCCCeeeecCC
Q 019580 220 PELYQQLRFQHEAQVLLVPSAFTKVTGQAHWEILLRARAIETQCYVIAAAQAGKHNDKRESYGDSLIIDPWGTVIGRLPD 299 (339)
Q Consensus 220 pe~~r~~~~~~gadlll~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~an~~G~~~~~~~~~G~S~Ii~p~G~ii~~~~~ 299 (339)
|+++|.++ ++|+|+|++|++|+...+..+|..+++.||+||++||+++|++|.++++..+.|.|+|++|+|+++++++.
T Consensus 159 pe~~r~~~-~~ga~ll~~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~~n~~G~~~~~~~~~G~S~ii~p~G~v~~~~~~ 237 (276)
T 2w1v_A 159 AELAQIYA-QRGCQLLVYPGAFNLTTGPAHWELLQRARAVDNQVYVATASPARDDKASYVAWGHSTVVDPWGQVLTKAGT 237 (276)
T ss_dssp HHHHHHHH-HTTEEEEEEECCCCTTHHHHHHHHHHHHHHHHHTCEEEEECCCCCTTSSSCCCCCCEEECTTSCEEEECCS
T ss_pred HHHHHHHH-HcCCCEEEECCcCCCcCCHHHHHHHHHHHHHHcCcEEEEecccccCCCCceeeeEeEEECCCCCEeEEcCC
Confidence 99999999 89999999999988765567899999999999999999999999887778999999999999999999875
Q ss_pred CCCceEEEEEeehhHHHHHHhcCCcccCCCCcccccc
Q 019580 300 RLSTGIAVADIDFSLIDSVRAKMPIAKHRKSIDFWKS 336 (339)
Q Consensus 300 ~~~~~vl~~~id~~~~~~~r~~~~~~~~~~~~~Y~~~ 336 (339)
++++++++||++.++..|..+|+++|||+++|...
T Consensus 238 --~e~~l~~~id~~~~~~~R~~~~~~~~~r~~~y~~~ 272 (276)
T 2w1v_A 238 --EETILYSDIDLKKLAEIRQQIPILKQKRADLYTVE 272 (276)
T ss_dssp --SSEEEEEEEEHHHHHHHHHHSCGGGSCCTTTEEEE
T ss_pred --CCeEEEEEEcHHHHHHHHHhCChhHhCCHHHhhcc
Confidence 69999999999999999999999999999999643
No 2
>1f89_A 32.5 kDa protein YLR351C; nitrilase, dimer, structural genomics, four layer sandwich, PSI, protein structure initiative; 2.40A {Saccharomyces cerevisiae} SCOP: d.160.1.1
Probab=100.00 E-value=5.3e-56 Score=409.42 Aligned_cols=275 Identities=31% Similarity=0.541 Sum_probs=234.9
Q ss_pred cCcccEEEEEEec-CcCCHHHHHHHHHHHHHHH--HHCCCeEEEeCCCCCCCCCCCcchhhhhccC--C--chHHHHHHH
Q 019580 58 GASSVRVAVAQMT-SINDLAANFATSSRLVKEA--ASAGAKLLCLPENFSYVGDKDGDSLKVAETL--D--GPIMQGYCS 130 (339)
Q Consensus 58 ~~~~~rVA~vQ~~-~~~d~~~n~~~~~~~i~~A--~~~gadlIVfPE~~~~~g~~~~~~~~~a~~~--~--~~~~~~l~~ 130 (339)
|+++||||++|++ +.+|++.|++++.+++++| .++|+|||||||++ ++||...+....++.+ . ++.++.|++
T Consensus 7 m~~~~~va~vQ~~~~~~d~~~n~~~~~~~i~~a~~~~~gadlvv~PE~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~ 85 (291)
T 1f89_A 7 LSQKIKVALVQLSGSSPDKMANLQRAATFIERAMKEQPDTKLVVLPECF-NSPYSTDQFRKYSEVINPKEPSTSVQFLSN 85 (291)
T ss_dssp BSSCEEEEEEECCCCCSCHHHHHHHHHHHHHHHHHHCTTEEEEECCTTT-TSCSCHHHHHHHTTBCCSSSCCHHHHHHHH
T ss_pred ccccceEEEEeccCCcCCHHHHHHHHHHHHHHHhhccCCCeEEEcCCCc-ccCCChHHHHHHhhhhccCCCChHHHHHHH
Confidence 3467999999999 6799999999999999999 88999999999997 4788766665666665 3 789999999
Q ss_pred HHHhcCcEEEEeeeeeecCCCCceEEEEEEEcCCCceeeeeeecccccccCCCCCcccccccccCCCceEEEecCCcceE
Q 019580 131 LARESRVWLSLGGFQEKGSDDAHLCNTHVLVDDAGNIRSTYRKMHLFDVDIPGGRSYKESSFTEAGKDIVAVDSPVGRLG 210 (339)
Q Consensus 131 ~A~~~~i~iv~Gs~~e~~~~~~~~yNsa~li~p~G~v~~~y~K~~L~~~~vP~~~~~~E~~~~~~G~~~~vf~~~~~kig 210 (339)
+|++++++|++|++.++..+++++||++++++|+|+++++|+|+|||++++|++..+.|..+|++|+++.+|+++++|+|
T Consensus 86 ~a~~~~~~iv~G~~~~~~~~~~~~yNs~~~i~~~G~i~~~y~K~hLf~e~~P~~~~~~E~~~f~~G~~~~v~~~~~~~ig 165 (291)
T 1f89_A 86 LANKFKIILVGGTIPELDPKTDKIYNTSIIFNEDGKLIDKHRKVHLFDVDIPNGISFHESETLSPGEKSTTIDTKYGKFG 165 (291)
T ss_dssp HHHHSSCEEECCCEEEECTTTCCEEEEEEEECTTSCEEEEEECCCCC----------HHHHSCCCCCCCEEEEETTEEEE
T ss_pred HHHHcCcEEEeceeecccCCCCceEEEEEEECCCCcEEeEEeeeccCCCccCccccccccccccCCCCCceEecCCeeEE
Confidence 99999999999977776211378999999999999999999999999999998877789999999999999999999999
Q ss_pred EEeeccCcchHHHHHHHhcCCceEEEEeCCCCCCCcHHHHHHHHHHHHHhcCcEEEEECCccCCCCCCCcceeeEEECCC
Q 019580 211 PTVCYDLRFPELYQQLRFQHEAQVLLVPSAFTKVTGQAHWEILLRARAIETQCYVIAAAQAGKHNDKRESYGDSLIIDPW 290 (339)
Q Consensus 211 v~IC~D~~~pe~~r~~~~~~gadlll~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~an~~G~~~~~~~~~G~S~Ii~p~ 290 (339)
++||||++|||++|.++ ++|+|+|++|++|+...+..+|..+++.||+||++||+++|++|...++..|+|.|+|++|+
T Consensus 166 ~~ICyD~~fpe~~r~l~-~~Ga~ll~~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~~n~~G~~~~~~~~~G~S~ii~p~ 244 (291)
T 1f89_A 166 VGICYDMRFPELAMLSA-RKGAFAMIYPSAFNTVTGPLHWHLLARSRAVDNQVYVMLCSPARNLQSSYHAYGHSIVVDPR 244 (291)
T ss_dssp ECCGGGGGCHHHHHHHH-HTTEEEEEEECCCBTTHHHHHHHHHHHHHHHHHTSEEEEECCCCCTTSSSCBCCCCEEECTT
T ss_pred EEEecccCchHHHHHHH-hhCCCEEEECCcCCCCCcHHHHHHHHHHHHHHcCCEEEEecCccCCCCCCeeeeEEEEECCC
Confidence 99999999999999999 89999999999988755678899999999999999999999999766678999999999999
Q ss_pred CCeeeecCCCCCceEEEEEeehhHHHHHHhcCCcccCCCCcccccc
Q 019580 291 GTVIGRLPDRLSTGIAVADIDFSLIDSVRAKMPIAKHRKSIDFWKS 336 (339)
Q Consensus 291 G~ii~~~~~~~~~~vl~~~id~~~~~~~r~~~~~~~~~~~~~Y~~~ 336 (339)
|+++++++. ++++++++||++.++..|..+|+++|||+++|..+
T Consensus 245 G~vl~~~~~--~e~~l~~~id~~~~~~~R~~~~~~~~~r~~~y~~~ 288 (291)
T 1f89_A 245 GKIVAEAGE--GEEIIYAELDPEVIESFRQAVPLTKQRRFDVYSDV 288 (291)
T ss_dssp SCEEEECCS--SSEEEEEEECHHHHHHHHHHSCCCCCCCC------
T ss_pred CCEEEecCC--CCeEEEEEECHHHHHHHHHhCChhHhCChhhhhhh
Confidence 999999875 69999999999999999999999999999999765
No 3
>3p8k_A Hydrolase, carbon-nitrogen family; HET: PGE; 1.70A {Staphylococcus aureus subsp}
Probab=100.00 E-value=6.6e-55 Score=400.09 Aligned_cols=260 Identities=25% Similarity=0.397 Sum_probs=238.1
Q ss_pred cccEEEEEEecCc-CCHHHHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcE
Q 019580 60 SSVRVAVAQMTSI-NDLAANFATSSRLVKEAASAGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVW 138 (339)
Q Consensus 60 ~~~rVA~vQ~~~~-~d~~~n~~~~~~~i~~A~~~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~ 138 (339)
++||||++|+++. +|++.|++++.+++++|.++|+|||||||++ ++||...++.+.++..+++.++.|+++|++++++
T Consensus 19 ~~~kva~~Q~~~~~~d~~~Nl~~~~~~i~~A~~~gadlvvfPE~~-l~gy~~~~~~~~a~~~~~~~~~~l~~la~~~~i~ 97 (281)
T 3p8k_A 19 SHMKVQIYQLPIVFGDSSKNETQITQWFEKNMNAEVDVVVLPEMW-NNGYDLEHLNEKADNNLGQSFSFIKHLAEKYKVD 97 (281)
T ss_dssp SEEEEEEEECCCCTTCHHHHHHHHHHHHHHHCCTTCCEEECCSST-TTTTCGGGHHHHSEETTHHHHHHHHHHHHHHTCE
T ss_pred CCcEEEEEeccCCcCCHHHHHHHHHHHHHHHHhCCCcEEEcCCCc-cCCCChhHHHHhhhccCcHHHHHHHHHHhhCCeE
Confidence 5799999999984 9999999999999999999999999999997 6899888777888888889999999999999999
Q ss_pred EEEeeeeeecCCCCceEEEEEEEcCCCceeeeeeecccccccCCCCCcccccccccCCCce-EEEec-CCcceEEEeecc
Q 019580 139 LSLGGFQEKGSDDAHLCNTHVLVDDAGNIRSTYRKMHLFDVDIPGGRSYKESSFTEAGKDI-VAVDS-PVGRLGPTVCYD 216 (339)
Q Consensus 139 iv~Gs~~e~~~~~~~~yNsa~li~p~G~v~~~y~K~~L~~~~vP~~~~~~E~~~~~~G~~~-~vf~~-~~~kigv~IC~D 216 (339)
|++|+..+. +++++||++++|+|+|++++.|+|+||++. |.|..+|++|+.. .+|++ +++|+|++||||
T Consensus 98 iv~G~~~~~--~~~~~yNs~~~i~~~G~i~~~y~K~hL~~~-------f~E~~~f~~G~~~~~v~~~~~~~~ig~~IC~D 168 (281)
T 3p8k_A 98 IVAGSVSNI--RNNQIFNTAFSVNKSGQLINEYDKVHLVPM-------LREHEFLTAGEYVAEPFQLSDGTYVTQLICYD 168 (281)
T ss_dssp EEEEEEEEE--ETTEEEEEEEEECTTSCEEEEEECSCCCTT-------TTGGGTCCCCSSCCCCEECTTCCEEEEEEGGG
T ss_pred EEEeeeEEc--cCCcEEEEEEEEcCCCeEEEEEeeEECCCC-------cCccccCcCCCCCceeEEeCCCcEEEEEEecC
Confidence 999976665 467899999999999999999999999531 4688999999998 99999 999999999999
Q ss_pred CcchHHHHHHHhcCCceEEEEeCCCCCCCcHHHHHHHHHHHHHhcCcEEEEECCccCCCCCCCcceeeEEECCCCCeeee
Q 019580 217 LRFPELYQQLRFQHEAQVLLVPSAFTKVTGQAHWEILLRARAIETQCYVIAAAQAGKHNDKRESYGDSLIIDPWGTVIGR 296 (339)
Q Consensus 217 ~~~pe~~r~~~~~~gadlll~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~an~~G~~~~~~~~~G~S~Ii~p~G~ii~~ 296 (339)
++|||+++.++ ++|+|+|++|++|+... ..+|..+++.||+||++||+++|++|.++ +..|+|.|+|++|+|+++++
T Consensus 169 ~~fpe~~r~~~-~~Gadli~~psa~~~~~-~~~~~~~~~arA~en~~~vv~~n~~G~~~-~~~~~G~S~ii~p~G~vl~~ 245 (281)
T 3p8k_A 169 LRFPELLRYPA-RSGAKIAFYVAQWPMSR-LQHWHSLLKARAIENNMFVIGTNSTGFDG-NTEYAGHSIVINPNGDLVGE 245 (281)
T ss_dssp GGCTHHHHHHH-HTTCCEEEEEECCBGGG-HHHHHHHHHHHHHHHTSEEEEEECEEECS-SCEEECCCEEECTTSCEEEE
T ss_pred CCCcHHHHHHH-HCCCCEEEECCCCCCcc-HHHHHHHHHHHHHHcCCEEEEEccCcCCC-CcEEeeeEEEECCCCCEEEe
Confidence 99999999999 89999999999987643 67888899999999999999999999864 46899999999999999999
Q ss_pred cCCCCCceEEEEEeehhHHHHHHhcCCcccCCCCcccc
Q 019580 297 LPDRLSTGIAVADIDFSLIDSVRAKMPIAKHRKSIDFW 334 (339)
Q Consensus 297 ~~~~~~~~vl~~~id~~~~~~~r~~~~~~~~~~~~~Y~ 334 (339)
+.+ ++++++++||++.++..|..+|+++|||||+|+
T Consensus 246 -~~~-~e~~l~~~id~~~~~~~R~~~p~~~~rr~~lY~ 281 (281)
T 3p8k_A 246 -LNE-SADILTVDLNLNEVEQQRENIPVFKSIKLDLYK 281 (281)
T ss_dssp -CCS-SCEEEEEEEETHHHHHHHHHSCGGGTCCTTTCC
T ss_pred -cCC-CCeEEEEEEcHHHHHHHHHhCcchhhcChhhcC
Confidence 554 799999999999999999999999999999994
No 4
>3hkx_A Amidase; alpha-beta-BETA-alpha:alpha-beta-BETA-alpha dimeric sandwich hydrolase; 1.66A {Nesterenkonia SP}
Probab=100.00 E-value=6.3e-54 Score=394.01 Aligned_cols=261 Identities=24% Similarity=0.286 Sum_probs=223.3
Q ss_pred cccEEEEEEecCc-CCHHHHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCcchh-hhhccCCchHHHHHHHHHHhcCc
Q 019580 60 SSVRVAVAQMTSI-NDLAANFATSSRLVKEAASAGAKLLCLPENFSYVGDKDGDSL-KVAETLDGPIMQGYCSLARESRV 137 (339)
Q Consensus 60 ~~~rVA~vQ~~~~-~d~~~n~~~~~~~i~~A~~~gadlIVfPE~~~~~g~~~~~~~-~~a~~~~~~~~~~l~~~A~~~~i 137 (339)
++||||++|+++. +|++.|++++.+++++|.++|+|||||||++ ++||...++. .+++...++.++.++++|+++++
T Consensus 19 ~~~rva~~Q~~~~~~d~~~N~~~~~~~i~~A~~~gadlvvfPE~~-l~gy~~~d~~~~~a~~~~~~~~~~l~~~a~~~~i 97 (283)
T 3hkx_A 19 SHMRIALMQHTARPLDPQHNLDLIDDAAARASEQGAQLLLTPELF-GFGYVPSQICAQVSAEQVDAARSRLRGIARDRGI 97 (283)
T ss_dssp EEEEEEEEEBCCCTTCHHHHHHHHHHHHHHHHHTTCSEEECCTTG-GGCSCHHHHHHHCCHHHHHHHHHHHHHHHHHTTS
T ss_pred CccEEEEEeCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEcCCCc-ccCCChHHHHHHhccccCCHHHHHHHHHHHHhCC
Confidence 4699999999975 7999999999999999999999999999997 5888766533 44555567899999999999999
Q ss_pred EEEEeeeeeecCCCCceEEEEEEEcCCCceeeeeeecccccccCCCCCcccccccccCCCc-eEEEecCCcceEEEeecc
Q 019580 138 WLSLGGFQEKGSDDAHLCNTHVLVDDAGNIRSTYRKMHLFDVDIPGGRSYKESSFTEAGKD-IVAVDSPVGRLGPTVCYD 216 (339)
Q Consensus 138 ~iv~Gs~~e~~~~~~~~yNsa~li~p~G~v~~~y~K~~L~~~~vP~~~~~~E~~~~~~G~~-~~vf~~~~~kigv~IC~D 216 (339)
+|++|. .++. +++++||++++|+|+|++++.|+|+|||++ .|..+|++|+. +.+|+++++|||++||||
T Consensus 98 ~iv~G~-~~~~-~~~~~yNs~~~i~~~G~i~~~y~K~hL~~~--------~E~~~f~~G~~~~~v~~~~~~~ig~~IC~D 167 (283)
T 3hkx_A 98 ALVWSL-PGPE-GPEQRGITAELADEHGEVLASYQKVQLYGP--------EEKAAFVPGEQPPPVLSWGGRQLSLLVCYD 167 (283)
T ss_dssp EEEECC-BCSS-CTTTCCBEEEEECTTSCEEEEEECSSCCHH--------HHHHHSCCCCSCCCEEEETTEEEEECCGGG
T ss_pred EEEEEE-EEEc-CCCCEEEEEEEEcCCCcEEEEEccccCCCc--------CchhhccCCCCCceEEEECCEEEEEEEecC
Confidence 999995 5552 347899999999999999999999999652 47889999997 689999999999999999
Q ss_pred CcchHHHHHHHhcCCceEEEEeCCCCCCCcHHHHHHHHHHHHHhcCcEEEEECCccCCCCCCCcceeeEEECCCCCeeee
Q 019580 217 LRFPELYQQLRFQHEAQVLLVPSAFTKVTGQAHWEILLRARAIETQCYVIAAAQAGKHNDKRESYGDSLIIDPWGTVIGR 296 (339)
Q Consensus 217 ~~~pe~~r~~~~~~gadlll~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~an~~G~~~~~~~~~G~S~Ii~p~G~ii~~ 296 (339)
++|||+++.++ .+|+|+|++|++|+...+ .+|..+++.||+||++||+++|.+|.++ +..+.|.|+|++|+|+++++
T Consensus 168 ~~fpe~~r~l~-~~Ga~li~~ps~~~~~~~-~~~~~~~~~rA~en~~~vv~~n~~G~~~-~~~~~G~S~ii~p~G~vl~~ 244 (283)
T 3hkx_A 168 VEFPEMVRAAA-ARGAQLVLVPTALAGDET-SVPGILLPARAVENGITLAYANHCGPEG-GLVFDGGSVVVGPAGQPLGE 244 (283)
T ss_dssp GGSHHHHHHHH-HTTCSEEEEECCCBSCCT-HHHHTHHHHHHHHHTCEEEEECBEEEET-TEEEECCCEEECTTSCEEEE
T ss_pred cCCHHHHHHHH-HCCCCEEEECCCCCCccc-HHHHHHHHHHHHHhCCEEEEEccccCCC-CeEEeeEEEEECCCCCEEEe
Confidence 99999999999 899999999999876543 6788899999999999999999999764 46899999999999999999
Q ss_pred cCCCCCceEEEEEeehhHHHHHHhcCCcccCCCCcccccc
Q 019580 297 LPDRLSTGIAVADIDFSLIDSVRAKMPIAKHRKSIDFWKS 336 (339)
Q Consensus 297 ~~~~~~~~vl~~~id~~~~~~~r~~~~~~~~~~~~~Y~~~ 336 (339)
++ + ++++++++||++.++..|..+|+++|||||+|.++
T Consensus 245 ~~-~-~e~~l~a~id~~~~~~~R~~~~~~~~rr~~ly~~l 282 (283)
T 3hkx_A 245 LG-V-EPGLLVVDLPDQSQDAGSDSADYLQDRRAELHRNW 282 (283)
T ss_dssp CC-S-SCEEEEEEEEC----------CHHHHSCHHHHHHH
T ss_pred cC-C-CCeEEEEEECHHHHHHHHHhCChhHhcCHhhhhhc
Confidence 98 4 79999999999999999999999999999999875
No 5
>3ivz_A Nitrilase; alpha-beta sandwich, hydrolase; 1.57A {Pyrococcus abyssi} SCOP: d.160.1.2 PDB: 3iw3_A 3ki8_A 3klc_A 1j31_A
Probab=100.00 E-value=7e-53 Score=382.91 Aligned_cols=253 Identities=30% Similarity=0.480 Sum_probs=228.8
Q ss_pred cEEEEEEecCc-CCHHHHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCcc---hhhhhcc-CCchHHHHHHHHHHhcC
Q 019580 62 VRVAVAQMTSI-NDLAANFATSSRLVKEAASAGAKLLCLPENFSYVGDKDGD---SLKVAET-LDGPIMQGYCSLARESR 136 (339)
Q Consensus 62 ~rVA~vQ~~~~-~d~~~n~~~~~~~i~~A~~~gadlIVfPE~~~~~g~~~~~---~~~~a~~-~~~~~~~~l~~~A~~~~ 136 (339)
||||++|+++. +|++.|++++.+++++|+++|+|||||||++ ++||...+ ....++. .+++.++.++++|++++
T Consensus 2 ~rva~~Q~~~~~~d~~~N~~~~~~~i~~A~~~gadlvvfPE~~-~~gy~~~~~~~~~~~a~~~~~~~~~~~l~~~a~~~~ 80 (262)
T 3ivz_A 2 VKVAYVQMNPQILEPDKNYSKAEKLIKEASKQGAQLVVLPELF-DTGYNFETREEVFEIAQKIPEGETTTFLMDVARDTG 80 (262)
T ss_dssp CEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCSEEECCTTT-TTCSCCSCHHHHHHHCBCTTTSHHHHHHHHHHHHHC
T ss_pred eEEEEEeccCCCCCHHHHHHHHHHHHHHHHHCCCCEEEeCCCc-ccCCCCCCHHHHHHhcCccCCCHHHHHHHHHHHHcC
Confidence 79999999985 9999999999999999999999999999997 68887643 3445553 46789999999999999
Q ss_pred cEEEEeeeeeecCCCCceEEEEEEEcCCCceeeeeeecccccccCCCCCcccccccccCCC-ceEEEecCCcceEEEeec
Q 019580 137 VWLSLGGFQEKGSDDAHLCNTHVLVDDAGNIRSTYRKMHLFDVDIPGGRSYKESSFTEAGK-DIVAVDSPVGRLGPTVCY 215 (339)
Q Consensus 137 i~iv~Gs~~e~~~~~~~~yNsa~li~p~G~v~~~y~K~~L~~~~vP~~~~~~E~~~~~~G~-~~~vf~~~~~kigv~IC~ 215 (339)
++|++| +.++ +++++||++++++|+| +++.|+|+||+ +.|..+|++|+ .+.+|+++++|+|++|||
T Consensus 81 ~~iv~G-~~~~--~~~~~yNs~~~i~~~G-~~~~y~K~hL~---------~~E~~~f~~G~~~~~v~~~~~~~ig~~IC~ 147 (262)
T 3ivz_A 81 VYIVAG-TAEK--DGDVLYNSAVVVGPRG-FIGKYRKIHLF---------YREKFFFEPGDLGFRVFDLGFMKVGVMICF 147 (262)
T ss_dssp CEEEEE-EEEE--ETTEEEEEEEEEETTE-EEEEEECSSCC---------GGGGGTCBCCCSCSCEEECSSCEEEECCGG
T ss_pred cEEEEe-EEEe--eCCcEEEEEEEEcCCe-eEEEEeecccC---------CchhceEeCCCCCceEEEECCEEEEEEEec
Confidence 999999 6676 4678999999999999 99999999993 36889999999 899999999999999999
Q ss_pred cCcchHHHHHHHhcCCceEEEEeCCCCCCCcHHHHHHHHHHHHHhcCcEEEEECCccCCCCCCCcceeeEEECCCCCeee
Q 019580 216 DLRFPELYQQLRFQHEAQVLLVPSAFTKVTGQAHWEILLRARAIETQCYVIAAAQAGKHNDKRESYGDSLIIDPWGTVIG 295 (339)
Q Consensus 216 D~~~pe~~r~~~~~~gadlll~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~an~~G~~~~~~~~~G~S~Ii~p~G~ii~ 295 (339)
|.+||++++.++ .+|+|+|++|++|+.. +|..+++.||+||++||+++|.+|.++ +..+.|.|+|++|+|++++
T Consensus 148 D~~fpe~~r~~~-~~ga~li~~ps~~~~~----~~~~~~~~rA~en~~~vv~~n~~G~~~-~~~~~G~S~ii~p~G~il~ 221 (262)
T 3ivz_A 148 DWFFPESARTLA-LKGADVIAHPANLVMP----YAPRAMPIRALENKVYTVTADRVGEER-GLKFIGKSLIASPKAEVLS 221 (262)
T ss_dssp GGGSHHHHHHHH-HTTCSEEEEEECCCSS----CHHHHHHHHHHHHTCEEEEEECCSEET-TEECCCCCEEECTTSCEEE
T ss_pred CCCchHHHHHHH-HCCCCEEEEcCCCCch----HHHHHHHHHHHhcCcEEEEECCCCcCC-CceEeeeEEEECCCCCEee
Confidence 999999999999 8999999999998653 688889999999999999999999865 4578999999999999999
Q ss_pred ecCCCCCceEEEEEeehhHHHHHHhc--CCcccCCCCccccc
Q 019580 296 RLPDRLSTGIAVADIDFSLIDSVRAK--MPIAKHRKSIDFWK 335 (339)
Q Consensus 296 ~~~~~~~~~vl~~~id~~~~~~~r~~--~~~~~~~~~~~Y~~ 335 (339)
+++.+ ++++++++||++.++..|.+ +|+++|||||+|.|
T Consensus 222 ~~~~~-~~~~~~~~id~~~~~~~R~~~~~p~l~~rr~~lY~~ 262 (262)
T 3ivz_A 222 MASET-EEEVGVAEIDLSLVRNKRINDLNDIFKDRREEYYFR 262 (262)
T ss_dssp ECCSS-CCEEEEEECCHHHHHCCEEETTEEHHHHCCGGGSCC
T ss_pred cCCCC-CceEEEEEEcHHHHHHHhhcccCchhhhcCHhhhCC
Confidence 99876 77899999999999999987 89999999999976
No 6
>1ems_A Nitfhit, NIT-fragIle histidine triad fusion protein; WORM, nitrilase, nucleotide-binding protein, cancer; 2.80A {Caenorhabditis elegans} SCOP: d.13.1.1 d.160.1.1
Probab=100.00 E-value=7.4e-53 Score=409.73 Aligned_cols=272 Identities=45% Similarity=0.792 Sum_probs=243.0
Q ss_pred cccEEEEEEecCcCCHHHHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCc-chhhhhccCCchHHHHHHHHHHhcCcE
Q 019580 60 SSVRVAVAQMTSINDLAANFATSSRLVKEAASAGAKLLCLPENFSYVGDKDG-DSLKVAETLDGPIMQGYCSLARESRVW 138 (339)
Q Consensus 60 ~~~rVA~vQ~~~~~d~~~n~~~~~~~i~~A~~~gadlIVfPE~~~~~g~~~~-~~~~~a~~~~~~~~~~l~~~A~~~~i~ 138 (339)
++||||++|+++..|.+.|++++.+++++|.++|+|||||||+++ +++... .....++...++.++.|+++|++++++
T Consensus 13 ~~~kVa~vQ~~~~~d~~~nl~~~~~li~~A~~~gadlvv~PE~~~-~~~~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~ 91 (440)
T 1ems_A 13 GRHFIAVCQMTSDNDLEKNFQAAKNMIERAGEKKCEMVFLPECFD-FIGLNKNEQIDLAMATDCEYMEKYRELARKHNIW 91 (440)
T ss_dssp SEEEEEEECBCCCSCHHHHHHHHHHHHHHHHHTTCSEEEECTTCS-CCCSSHHHHHHHHHHHHHHHHHHHHHHHHHTTCE
T ss_pred CCceEEEEecCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCccc-ccCcchhHHHHhhccCCCHHHHHHHHHHHHcCeE
Confidence 479999999998899999999999999999999999999999974 555432 233445555678999999999999999
Q ss_pred EEEeeee--eecCCCCceEEEEEEEcCCCceeeeeeecccccccCCCCCcccccccccCCCceEE-EecCCcceEEEeec
Q 019580 139 LSLGGFQ--EKGSDDAHLCNTHVLVDDAGNIRSTYRKMHLFDVDIPGGRSYKESSFTEAGKDIVA-VDSPVGRLGPTVCY 215 (339)
Q Consensus 139 iv~Gs~~--e~~~~~~~~yNsa~li~p~G~v~~~y~K~~L~~~~vP~~~~~~E~~~~~~G~~~~v-f~~~~~kigv~IC~ 215 (339)
|++|++. ++. +++++||++++++|+|+++++|+|+||+++++|.+..|.|..+|++|++..+ |+++++|+|++|||
T Consensus 92 iv~G~~~~~e~~-~~~~~yNs~~~i~~~G~i~~~yrK~hL~~~~~P~~~~~~E~~~f~~G~~~~~~~~~~~~~iG~~ICy 170 (440)
T 1ems_A 92 LSLGGLHHKDPS-DAAHPWNTHLIIDSDGVTRAEYNKLHLFDLEIPGKVRLMESEFSKAGTEMIPPVDTPIGRLGLSICY 170 (440)
T ss_dssp EEEEEEEEEETT-EEEEEEEEEEEECTTSCEEEEEECCCCCEEEETTTEEEEGGGTCCCCCSCCCCEEETTEEECCCCGG
T ss_pred EEeccccccccC-CCCcEEEEEEEECCCCcEEEEEeeeeecCccCCCCCcccccccccCCCCCceeEECCCeeEEEEEec
Confidence 9999776 541 3468999999999999999999999999988898777789999999999888 99999999999999
Q ss_pred cCcchHHHHHHHhcCCceEEEEeCCCCCCCcHHHHHHHHHHHHHhcCcEEEEECCccCCCCCCCcceeeEEECCCCCeee
Q 019580 216 DLRFPELYQQLRFQHEAQVLLVPSAFTKVTGQAHWEILLRARAIETQCYVIAAAQAGKHNDKRESYGDSLIIDPWGTVIG 295 (339)
Q Consensus 216 D~~~pe~~r~~~~~~gadlll~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~an~~G~~~~~~~~~G~S~Ii~p~G~ii~ 295 (339)
|.+||++++.++ ++|+|+|++|++|+...+..+|..+++.||+||++||++||++|.++++..++|.|+|++|+|++++
T Consensus 171 D~~fpe~~r~l~-~~Ga~il~~psa~~~~~~~~~~~~~~~arA~En~~~vv~an~~G~~~~~~~~~G~S~ii~P~G~vla 249 (440)
T 1ems_A 171 DVRFPELSLWNR-KRGAQLLSFPSAFTLNTGLAHWETLLRARAIENQCYVVAAAQTGAHNPKRQSYGHSMVVDPWGAVVA 249 (440)
T ss_dssp GGGCHHHHHHHH-HTTCSEEECCBCCCHHHHHHHHHHHHHHHHHHHTCEEEECBBEEEEETTEEEECCCEEECTTSCEEE
T ss_pred cccChHHHHHHH-HcCCcEEEECCcCCCCCcHHHHHHHHHHHHHhcCcEEEEecccccCCCCceeeeeeEEECCCCCeec
Confidence 999999999999 8999999999998765556789999999999999999999999977666789999999999999999
Q ss_pred ecCCCCCceEEEEEeehhHHHHHHhcCCcccCCCCcccccc
Q 019580 296 RLPDRLSTGIAVADIDFSLIDSVRAKMPIAKHRKSIDFWKS 336 (339)
Q Consensus 296 ~~~~~~~~~vl~~~id~~~~~~~r~~~~~~~~~~~~~Y~~~ 336 (339)
+++. ++++++++||++.++..|..+|+++|+|+++|..+
T Consensus 250 ~~~~--~e~il~a~idl~~~~~~R~~~~~~~~rr~~~y~~~ 288 (440)
T 1ems_A 250 QCSE--RVDMCFAEIDLSYVDTLREMQPVFSHRRSDLYTLH 288 (440)
T ss_dssp ECCS--SSCEEEEEEEHHHHHHHHHHSCGGGSCCTTTCCCC
T ss_pred cCCC--CCcEEEEEeCHHHHHHHHHhCChhhhcChhhhhcc
Confidence 9873 68999999999999999999999999999999754
No 7
>2e11_A Hydrolase; dimethylarsenic inhibi complex, cacodylate; 1.73A {Xanthomonas campestris PV}
Probab=100.00 E-value=4.9e-52 Score=378.12 Aligned_cols=259 Identities=25% Similarity=0.369 Sum_probs=228.8
Q ss_pred cccEEEEEEecCc-CCHHHHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcE
Q 019580 60 SSVRVAVAQMTSI-NDLAANFATSSRLVKEAASAGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVW 138 (339)
Q Consensus 60 ~~~rVA~vQ~~~~-~d~~~n~~~~~~~i~~A~~~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~ 138 (339)
++||||++|+++. +|++.|++++.+++++| ++|+|||||||++ ++||.. +....++...++.++.++++|++++++
T Consensus 2 ~~~kva~~Q~~~~~~d~~~n~~~~~~~i~~a-~~gadlvv~PE~~-~~gy~~-~~~~~a~~~~~~~~~~l~~~a~~~~~~ 78 (266)
T 2e11_A 2 HDLRISLVQGSTRWHDPAGNRDYYGALLEPL-AGQSDLVILPETF-TSGFSN-EAIDKAEDMDGPTVAWIRTQAARLGAA 78 (266)
T ss_dssp CCEEEEEEECCCCTTCHHHHHHHHHHHHGGG-TTTCSEEECCTTT-TTCSCS-GGGGGCEETTSHHHHHHHHHHHHHTSE
T ss_pred CccEEEEEeCCCCcCCHHHHHHHHHHHHHHh-cCCCCEEECCCCc-cccCCh-hHHHhhccCCCHHHHHHHHHHHHhCCE
Confidence 4699999999975 89999999999999999 8899999999997 578853 344556677889999999999999999
Q ss_pred EEEeeeeeecCCCCceEEEEEEEcCCCceeeeeeecccccccCCCCCcccccccccCCCceEEEecCCcceEEEeeccCc
Q 019580 139 LSLGGFQEKGSDDAHLCNTHVLVDDAGNIRSTYRKMHLFDVDIPGGRSYKESSFTEAGKDIVAVDSPVGRLGPTVCYDLR 218 (339)
Q Consensus 139 iv~Gs~~e~~~~~~~~yNsa~li~p~G~v~~~y~K~~L~~~~vP~~~~~~E~~~~~~G~~~~vf~~~~~kigv~IC~D~~ 218 (339)
|++|.. ++ +++++||++++++|+|+++ .|+|+||++. +.|..+|++|+.+.+|+++++|+|++||||++
T Consensus 79 iv~G~~-~~--~~~~~yNs~~~i~~~G~i~-~y~K~hL~~~-------~~E~~~f~~G~~~~v~~~~~~~ig~~ICyD~~ 147 (266)
T 2e11_A 79 ITGSVQ-LR--TEHGVFNRLLWATPDGALQ-YYDKRHLFRF-------GNEHLRYAAGRERLCVEWKGWRINPQVCYDLR 147 (266)
T ss_dssp EEEEEE-EE--ETTEEEEEEEEECTTSCEE-EEECSSCCGG-------GTTTTTSBCCCSCCCEEETTEEEEEEEGGGGG
T ss_pred EEEeee-Ec--cCCcEEEEEEEECCCCCEE-EEeeeccCCC-------cChhhhccCCCCceEEEECCEEEEEEEEeccC
Confidence 999955 44 4678999999999999999 9999999631 35888999999999999999999999999999
Q ss_pred chHHHHHHH--hcC---CceEEEEeCCCCCCCcHHHHHHHHHHHHHhcCcEEEEECCccCCCCCCCcceeeEEECCCCCe
Q 019580 219 FPELYQQLR--FQH---EAQVLLVPSAFTKVTGQAHWEILLRARAIETQCYVIAAAQAGKHNDKRESYGDSLIIDPWGTV 293 (339)
Q Consensus 219 ~pe~~r~~~--~~~---gadlll~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~an~~G~~~~~~~~~G~S~Ii~p~G~i 293 (339)
||++.+.++ .++ |+|+|++|++|+... ..+|..+++.||+||++||+++|.+|.+.++..+.|.|+|++|+|++
T Consensus 148 fpe~~r~~~~~~~~~~~ga~~i~~~s~w~~~~-~~~~~~~~~~rA~en~~~vv~an~~G~~~~~~~~~G~S~ii~p~G~v 226 (266)
T 2e11_A 148 FPVFCRNRFDVERPGQLDFDLQLFVANWPSAR-AYAWKTLLRARAIENLCFVAAVNRVGVDGNQLHYAGDSAVIDFLGQP 226 (266)
T ss_dssp CTTTTCCCBSSSSTTSBSCSEEEEEECCCGGG-HHHHHHHHHHHHHHTTSEEEEEECEEECTTSCEEEEEEEEECTTSCE
T ss_pred CHHHHHHHHhhhhccCCCCcEEEEeCCCCCCc-hHHHHHHHHHHHHhcCcEEEEEcCCcCCCCCceEeeeEEEECCCCce
Confidence 999998763 033 999999999987643 45789999999999999999999999876667899999999999999
Q ss_pred eeecCCCCCceEEEEEeehhHHHHHHhcCCcccCCCCccccc
Q 019580 294 IGRLPDRLSTGIAVADIDFSLIDSVRAKMPIAKHRKSIDFWK 335 (339)
Q Consensus 294 i~~~~~~~~~~vl~~~id~~~~~~~r~~~~~~~~~~~~~Y~~ 335 (339)
+++++ + ++++++++||++.++..|..+|+++||||++|++
T Consensus 227 ~~~~~-~-~e~~l~~~id~~~~~~~R~~~~~~~~rr~~~y~~ 266 (266)
T 2e11_A 227 QVEIR-E-QEQVVTTTISAAALAEHRARFPAMLDGDSFVLGE 266 (266)
T ss_dssp EEEEE-S-SCEEEEEEECHHHHHHHHHHSCGGGGCCCEEEC-
T ss_pred eeecC-C-CCeEEEEEEcHHHHHHHHHhCChhhhcChhhhcC
Confidence 99988 4 7999999999999999999999999999999974
No 8
>1uf5_A N-carbamyl-D-amino acid amidohydrolase; HET: CDT; 1.60A {Agrobacterium SP} SCOP: d.160.1.2 PDB: 1uf4_A* 1uf7_A* 1uf8_A* 1erz_A 1fo6_A 2ggl_A 2ggk_A
Probab=100.00 E-value=1.5e-50 Score=374.99 Aligned_cols=273 Identities=22% Similarity=0.288 Sum_probs=230.0
Q ss_pred cccEEEEEEecCc---CCHHHHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCcch-------hhhhc-cCCchHHHHH
Q 019580 60 SSVRVAVAQMTSI---NDLAANFATSSRLVKEAASAGAKLLCLPENFSYVGDKDGDS-------LKVAE-TLDGPIMQGY 128 (339)
Q Consensus 60 ~~~rVA~vQ~~~~---~d~~~n~~~~~~~i~~A~~~gadlIVfPE~~~~~g~~~~~~-------~~~a~-~~~~~~~~~l 128 (339)
++||||++|+++. +|.+.|++++.+++++|.++|+|||||||++ ++||...++ ....+ ...++.++.|
T Consensus 2 ~~~~va~~Q~~~~~~~~d~~~n~~~~~~~i~~a~~~gadlvv~PE~~-~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (303)
T 1uf5_A 2 RQMILAVGQQGPIARAETREQVVVRLLDMLTKAASRGANFIVFPELA-LTTFFPRWHFTDEAELDSFYETEMPGPVVRPL 80 (303)
T ss_dssp CEEEEEEEEBCCCCTTCCHHHHHHHHHHHHHHHHHTTCSEEECCTTT-TSCCGGGSCCCCHHHHHTTSBSSSSCTTTHHH
T ss_pred ccEEEEEEEecCcccccCHHHHHHHHHHHHHHHHhcCCCEEEecccc-ccCCCccccccchhhhHHHHhhcCCCHHHHHH
Confidence 4699999999974 7999999999999999999999999999997 577754320 01111 1156788999
Q ss_pred HHHHHhcCcEEEEeeeeeecCCCC---ceEEEEEEEcCCCceeeeeeecccc--cccCCCCCcc--cccccccCCC-ceE
Q 019580 129 CSLARESRVWLSLGGFQEKGSDDA---HLCNTHVLVDDAGNIRSTYRKMHLF--DVDIPGGRSY--KESSFTEAGK-DIV 200 (339)
Q Consensus 129 ~~~A~~~~i~iv~Gs~~e~~~~~~---~~yNsa~li~p~G~v~~~y~K~~L~--~~~vP~~~~~--~E~~~~~~G~-~~~ 200 (339)
+++|++++++|++|. .++. +++ ++||++++++|+|+++++|+|+||+ ++++|.. .| .|..+|++|+ .+.
T Consensus 81 ~~~a~~~~~~iv~G~-~~~~-~~~~~~~~yNs~~~i~~~G~i~~~y~K~hL~~~~e~~p~~-~~~~~E~~~f~~G~~~~~ 157 (303)
T 1uf5_A 81 FEKAAELGIGFNLGY-AELV-VEGGVKRRFNTSILVDKSGKIVGKYRKIHLPGHKEYEAYR-PFQHLEKRYFEPGDLGFP 157 (303)
T ss_dssp HHHHHHHTCEEEEEE-EEEE-EETTEEEEEEEEEEECTTSCEEEEEECCCCCSCSSCCTTC-SSCCCHHHHCCCCSSCSC
T ss_pred HHHHHHhCeEEEEee-eEec-CCCCCcceeeEEEEECCCCCEeeeEeeeecCCcccccccc-cccccchhhccCCCCCCc
Confidence 999999999999995 4542 233 7999999999999999999999984 3555643 24 6888999999 899
Q ss_pred EEecCCcceEEEeeccCcchHHHHHHHhcCCceEEEEe---CCCCCCC------cHHHHHHHHHHHHHhcCcEEEEECCc
Q 019580 201 AVDSPVGRLGPTVCYDLRFPELYQQLRFQHEAQVLLVP---SAFTKVT------GQAHWEILLRARAIETQCYVIAAAQA 271 (339)
Q Consensus 201 vf~~~~~kigv~IC~D~~~pe~~r~~~~~~gadlll~p---s~~~~~~------~~~~~~~~~~~rA~en~~~vv~an~~ 271 (339)
+|+++++|+|++||||++||+++|.++ ++|+|+|++| ++++... ...+|..+++.||+||++||+++|++
T Consensus 158 v~~~~~~~ig~~ICyD~~fpe~~r~l~-~~ga~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rA~en~~~vv~~n~~ 236 (303)
T 1uf5_A 158 VYDVDAAKMGMFIANDRRWPEAWRVMG-LRGAEIICGGYNTPTHNPPVPQHDHLTSFHHLLSMQAGSYQNGAWSAAAGKA 236 (303)
T ss_dssp EEEETTEEEEECCGGGGGCHHHHHHHH-HTTCSEEEEEECCBSCCTTCGGGGGGHHHHHHHHHHHHHHHHTCEEEEEEBC
T ss_pred eEecCCceEEEEEecCccCHHHHHHHH-HCCCCEEEEecCCccccccccCCccccHHHHHHHHHhhhhcCCcEEEEECcc
Confidence 999999999999999999999999999 7999999665 4444333 34677888999999999999999999
Q ss_pred cCCCCCCCcceeeEEECCCCCeeeecCCCCCceEEEEEeehhHHHHHHhc-CCcccCCCCcccccccCC
Q 019580 272 GKHNDKRESYGDSLIIDPWGTVIGRLPDRLSTGIAVADIDFSLIDSVRAK-MPIAKHRKSIDFWKSASL 339 (339)
Q Consensus 272 G~~~~~~~~~G~S~Ii~p~G~ii~~~~~~~~~~vl~~~id~~~~~~~r~~-~~~~~~~~~~~Y~~~~~~ 339 (339)
|.+++ ..++|+|+|++|+|+++++++.+ ++++++++||++.++..|.. +|+++|||+++|..+..|
T Consensus 237 G~~~~-~~~~G~S~ii~p~G~vl~~~~~~-~~~~l~~~id~~~~~~~R~~~~~~~~~rr~~~y~~~~~~ 303 (303)
T 1uf5_A 237 GMEEN-CMLLGHSCIVAPTGEIVALTTTL-EDEVITAAVDLDRCRELREHIFNFKQHRQPQHYGLIAEL 303 (303)
T ss_dssp EEETT-EEECCCCEEECTTSCEEEECCSS-SSEEEEEEEEGGGGHHHHTTTTCHHHHCCGGGCGGGGCC
T ss_pred cccCC-ccccceeEEECCCCCEeccCCCC-CCcEEEEEEcHHHHHHHHhhcccchhccCHHHHHHhhcC
Confidence 97653 57999999999999999998875 68999999999999999999 999999999999987654
No 9
>2vhh_A CG3027-PA; hydrolase; 2.8A {Drosophila melanogaster} PDB: 2vhi_A
Probab=100.00 E-value=2.1e-50 Score=387.33 Aligned_cols=268 Identities=21% Similarity=0.340 Sum_probs=221.8
Q ss_pred cccEEEEEEecCc--------CCHHHHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCc-----chhhhhccC-CchHH
Q 019580 60 SSVRVAVAQMTSI--------NDLAANFATSSRLVKEAASAGAKLLCLPENFSYVGDKDG-----DSLKVAETL-DGPIM 125 (339)
Q Consensus 60 ~~~rVA~vQ~~~~--------~d~~~n~~~~~~~i~~A~~~gadlIVfPE~~~~~g~~~~-----~~~~~a~~~-~~~~~ 125 (339)
++||||++|+++. ++.+.|++++.+++++|.++|+|||||||++ +++|... .+..+++.. .++.+
T Consensus 71 ~~~rVAlvQ~~i~~~~~~~~~~d~~~nl~~~~~li~~A~~~gadLVVfPE~~-l~gy~~~~~~~~~~~~~ae~~~~~~~~ 149 (405)
T 2vhh_A 71 RIVRVGAIQNSIVIPTTAPIEKQREAIWNKVKTMIKAAAEAGCNIVCTQEAW-TMPFAFCTREKFPWCEFAEEAENGPTT 149 (405)
T ss_dssp CEEEEEEEECCCCSCSSSCHHHHHHHHHHHHHHHHHHHHHTTCSEEECCTTT-TSCSCC---------CCCBCTTTSHHH
T ss_pred CCCEEEEEeccccccccccccccHHHHHHHHHHHHHHHHHCCCCEEEcCCcc-cccccccccchhhHHHHHhhccCCHHH
Confidence 5699999999953 4678999999999999999999999999997 4666421 123345544 57889
Q ss_pred HHHHHHHHhcCcEEEEeeeeeecCC-CCceEEEEEEEcCCCceeeeeeecccccccCCCCCcccccccccCCCc-eEEEe
Q 019580 126 QGYCSLARESRVWLSLGGFQEKGSD-DAHLCNTHVLVDDAGNIRSTYRKMHLFDVDIPGGRSYKESSFTEAGKD-IVAVD 203 (339)
Q Consensus 126 ~~l~~~A~~~~i~iv~Gs~~e~~~~-~~~~yNsa~li~p~G~v~~~y~K~~L~~~~vP~~~~~~E~~~~~~G~~-~~vf~ 203 (339)
+.|+++|++++++|++| +.++... ++++||++++|+|+|+++++|+|+||+ ....|.|..+|.+|+. +.+|+
T Consensus 150 ~~l~~lA~~~~i~Iv~G-~~e~~~~~~~~~yNsa~vi~p~G~i~~~YrK~hL~-----~~g~f~E~~~f~~G~~~~~vf~ 223 (405)
T 2vhh_A 150 KMLAELAKAYNMVIIHS-ILERDMEHGETIWNTAVVISNSGRYLGKHRKNHIP-----RVGDFNESTYYMEGNTGHPVFE 223 (405)
T ss_dssp HHHHHHHHHTTCEEEEE-EEEEETTTTTEEEEEEEEECTTSCEEEEEECSCCC-----C----------CCCCSCCCEEE
T ss_pred HHHHHHHHHCCEEEEEe-ceecccCCCCcEEEEEEEECCCCeEEEEEecccCC-----CCCCcCcccceeCCCCCCeeEE
Confidence 99999999999999998 5555321 568999999999999999999999993 2234578999999985 89999
Q ss_pred cCCcceEEEeeccCcchHHHHHHHhcCCceEEEEeCCCCCCCcHHHHHHHHHHHHHhcCcEEEEECCccCCC--------
Q 019580 204 SPVGRLGPTVCYDLRFPELYQQLRFQHEAQVLLVPSAFTKVTGQAHWEILLRARAIETQCYVIAAAQAGKHN-------- 275 (339)
Q Consensus 204 ~~~~kigv~IC~D~~~pe~~r~~~~~~gadlll~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~an~~G~~~-------- 275 (339)
++++|||++||||++||++++.++ ++|||+|++|++|....+..+|..++++||+||++||+++|++|.+.
T Consensus 224 ~~~~riG~~ICyD~~fPe~~r~la-~~GAdill~psa~~~~~~~~~w~~l~raRAiEn~~~Vv~aN~vG~~~~~~~~~~~ 302 (405)
T 2vhh_A 224 TEFGKLAVNICYGRHHPQNWMMFG-LNGAEIVFNPSATIGRLSEPLWSIEARNAAIANSYFTVPINRVGTEQFPNEYTSG 302 (405)
T ss_dssp ETTEEEEECCGGGGGCHHHHHHHH-HTTCSEEEEEECCBCTTTHHHHHHHHHHHHHHHTSEEEEEECEECCCCC------
T ss_pred ECCEEEEEEEeccccChHHHHHHH-HcCCCEEEEcccCCCCCCHHHHHHHHHHHHHHcCceEEEeccccccccccccccc
Confidence 999999999999999999999998 79999999999887655567899999999999999999999999763
Q ss_pred -------CCCCcceeeEEECCCCCeeeecCCCCCceEEEEEeehhHHHHHHhcCCcccCCCCcccccc
Q 019580 276 -------DKRESYGDSLIIDPWGTVIGRLPDRLSTGIAVADIDFSLIDSVRAKMPIAKHRKSIDFWKS 336 (339)
Q Consensus 276 -------~~~~~~G~S~Ii~p~G~ii~~~~~~~~~~vl~~~id~~~~~~~r~~~~~~~~~~~~~Y~~~ 336 (339)
+...|+|.|+|++|+|+++++++.+ ++++++++||++.++..|..+|++++||+++|.++
T Consensus 303 ~g~~~~~~~~~f~G~S~IidP~G~vla~~~~~-~e~il~aeiDl~~~~~~R~~~p~~~~rR~~lY~~~ 369 (405)
T 2vhh_A 303 DGNKAHKEFGPFYGSSYVAAPDGSRTPSLSRD-KDGLLVVELDLNLCRQVKDFWGFRMTQRVPLYAES 369 (405)
T ss_dssp -----------EECCCCCBCTTSCBCCCCCSS-SCEEEEEEEETTHHHHHHHHHCTTTTCCHHHHHHH
T ss_pred cCccccccCceeccccceECCCCCEeeccCCC-CCeEEEEEECHHHHHHHHHhCCchhhcCHHHHHHH
Confidence 1246799999999999999998865 79999999999999999999999999999999865
No 10
>2dyu_A Formamidase; AMIF, CEK, catalytic triad, helicobacter pylori aliphatic amidase, hydrolase; 1.75A {Helicobacter pylori} PDB: 2dyv_A 2e2l_A 2e2k_A
Probab=100.00 E-value=1.3e-46 Score=352.87 Aligned_cols=251 Identities=20% Similarity=0.273 Sum_probs=215.7
Q ss_pred cccEEEEEEecC-----cCCHHHHHHHHHHHHHHHHH--CCCeEEEeCCCCCCCCCCC--cchhhhhccCCchHHHHHHH
Q 019580 60 SSVRVAVAQMTS-----INDLAANFATSSRLVKEAAS--AGAKLLCLPENFSYVGDKD--GDSLKVAETLDGPIMQGYCS 130 (339)
Q Consensus 60 ~~~rVA~vQ~~~-----~~d~~~n~~~~~~~i~~A~~--~gadlIVfPE~~~~~g~~~--~~~~~~a~~~~~~~~~~l~~ 130 (339)
.+||||++|+++ .+|++.|++++.+++++|.+ +|+|||||||++ ++||.. .+..+.++..+++.++.|++
T Consensus 12 ~~~~Va~vQ~~i~~~~~~~d~~~nl~~~~~li~~A~~~~~gadLVVfPE~~-l~G~~~~~~~~~~~a~~~~~~~~~~l~~ 90 (334)
T 2dyu_A 12 EGFLVAAIQFPVPIVNSRKDIDHNIESIIRTLHATKAGYPGVELIIFPEYS-TQGLNTAKWLSEEFLLDVPGKETELYAK 90 (334)
T ss_dssp -CEEEEEECCBCCCCCSHHHHHHHHHHHHHHHHHHHHHCTTEEEEECCTTT-TTCCCTTTTTSGGGCBCSSSHHHHHHHH
T ss_pred CccEEEEEecCCccCCchhhHHHHHHHHHHHHHHHHhcCCCCcEEEcCCCc-cccCCCChhHHHHhhccCCCHHHHHHHH
Confidence 469999999994 36889999999999999987 799999999997 577543 23445566667889999999
Q ss_pred HHHhcCcEEEEeeeeeecCCCCc--eEEEEEEEcCCCceeeeeeecccccccCCCCCcccccccccCCCceE-EEecC-C
Q 019580 131 LARESRVWLSLGGFQEKGSDDAH--LCNTHVLVDDAGNIRSTYRKMHLFDVDIPGGRSYKESSFTEAGKDIV-AVDSP-V 206 (339)
Q Consensus 131 ~A~~~~i~iv~Gs~~e~~~~~~~--~yNsa~li~p~G~v~~~y~K~~L~~~~vP~~~~~~E~~~~~~G~~~~-vf~~~-~ 206 (339)
+|+++++++++| +.++. ++++ +||++++|+|+|++++.|+|+|||+ |..+|.+|+... +|+++ +
T Consensus 91 ~a~~~~i~iv~G-~~e~~-~~~~~~~yNsa~vi~p~G~i~~~YrK~hlf~----------e~~~f~~G~~~~~v~~~~~g 158 (334)
T 2dyu_A 91 ACKEAKVYGVFS-IMERN-PDSNKNPYNTAIIIDPQGEIILKYRKLFPWN----------PIEPWYPGDLGMPVCEGPGG 158 (334)
T ss_dssp HHHHHTCEEEEE-EEECC-SSTTSCCEEEEEEECTTSCEEEEEECSSCCT----------TTCCCCCCCSCCCCEECGGG
T ss_pred HHHHhCeEEEEe-eEEEC-CCCCceeEEEEEEECCCCCEEEEEeeccCCC----------CcccCcCCCCCceeEECCCC
Confidence 999999999998 45653 2334 9999999999999999999999864 345688998765 99985 5
Q ss_pred cceEEEeeccCcchHHHHHHHhcCCceEEEEeCCCCCCCcHHHHHHHHHHHHHhcCcEEEEECCccCCCCCCCcceeeEE
Q 019580 207 GRLGPTVCYDLRFPELYQQLRFQHEAQVLLVPSAFTKVTGQAHWEILLRARAIETQCYVIAAAQAGKHNDKRESYGDSLI 286 (339)
Q Consensus 207 ~kigv~IC~D~~~pe~~r~~~~~~gadlll~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~an~~G~~~~~~~~~G~S~I 286 (339)
.|+|++||||++|||++|.++ ++|+|+|++|++|+.. ...+|..++++||+||++||+++|++|.++ ...|.|.|+|
T Consensus 159 ~~iG~~ICyD~~fpe~~r~~~-~~Gadlil~psaw~~~-~~~~~~~~~~arA~En~~~vv~an~~G~~~-~~~~~G~S~I 235 (334)
T 2dyu_A 159 SKLAVCICHDGMIPELAREAA-YKGCNVYIRISGYSTQ-VNDQWILTNRSNAWHNLMYTVSVNLAGYDN-VFYYFGEGQI 235 (334)
T ss_dssp CEEEEEEGGGGGCHHHHHHHH-HTTCSEEEEEESSCTT-SHHHHHHHHHHHHHHHTCEEEEEECSBSSS-SCCCCCEEEE
T ss_pred CEEEEEEECCCCchHHHHHHH-HcCCCEEEEeCCCCCC-cHHHHHHHHHHHHHhCCCEEEEECCCcCCC-CeeeeeEEEE
Confidence 699999999999999999999 7999999999998654 356899999999999999999999999764 4689999999
Q ss_pred ECCCCCeeeecCCCCCceEEEEEeehhHHHHHHhcCCcccC
Q 019580 287 IDPWGTVIGRLPDRLSTGIAVADIDFSLIDSVRAKMPIAKH 327 (339)
Q Consensus 287 i~p~G~ii~~~~~~~~~~vl~~~id~~~~~~~r~~~~~~~~ 327 (339)
++|+|+++++++.+ ++++++++||++.++..|..+++.++
T Consensus 236 idp~G~vla~~~~~-~e~il~a~idl~~~~~~R~~~~~~~~ 275 (334)
T 2dyu_A 236 CNFDGTTLVQGHRN-PWEIVTGEIYPKMADNARLSWGLENN 275 (334)
T ss_dssp ECTTSCEEEECCCC-TTCEEEEEECHHHHHHHHHHCSTTCH
T ss_pred ECCCCCEeeecCCC-CCeEEEEEEcHHHHHHHHhhCchhhh
Confidence 99999999998865 78999999999999999999887655
No 11
>2uxy_A Aliphatic amidase; nitrilase superfamily, hydrolase, acyl transfer, thiol enzymes, hydroxamic acid; HET: C3Y; 1.25A {Pseudomonas aeruginosa} PDB: 2plq_A
Probab=100.00 E-value=9.1e-47 Score=354.83 Aligned_cols=252 Identities=21% Similarity=0.301 Sum_probs=218.2
Q ss_pred CcccEEEEEEecC-----cCCHHHHHHHHHHHHHHHHH--CCCeEEEeCCCCCCCCCCC--cchhhhhccCCchHHHHHH
Q 019580 59 ASSVRVAVAQMTS-----INDLAANFATSSRLVKEAAS--AGAKLLCLPENFSYVGDKD--GDSLKVAETLDGPIMQGYC 129 (339)
Q Consensus 59 ~~~~rVA~vQ~~~-----~~d~~~n~~~~~~~i~~A~~--~gadlIVfPE~~~~~g~~~--~~~~~~a~~~~~~~~~~l~ 129 (339)
+++||||++|+++ .+|++.|++++.+++++|.+ +|+|||||||++ ++||.. .++.+.++..+++.++.|+
T Consensus 10 ~~~~kValvQ~~i~~~~~~~d~~~Nl~~i~~~i~~A~~~~~gadLVVfPE~~-l~G~~~~~~~~~~~a~~~~~~~~~~l~ 88 (341)
T 2uxy_A 10 NDTVGVAVVNYKMPRLHTAAEVLDNARKIAEMIVGMKQGLPGMDLVVFPEYS-LQGIMYDPAEMMETAVAIPGEETEIFS 88 (341)
T ss_dssp TTEEEEEEECCBCCBCCSHHHHHHHHHHHHHHHHHHHHHCTTEEEEECCTTT-TTBCCCSHHHHHHHCBCSSSHHHHHHH
T ss_pred CCccEEEEEECCcccCCCccCHHHHHHHHHHHHHHHHhcCCCCcEEEeCCCc-ccccCCCHHHHHHHhccCCCHHHHHHH
Confidence 3579999999994 36889999999999999987 799999999997 577643 3455667777789999999
Q ss_pred HHHHhcCcEEEEeeeeeecCC--CCceEEEEEEEcCCCceeeeeeecccccccCCCCCcccccccccCCCceEEEecC-C
Q 019580 130 SLARESRVWLSLGGFQEKGSD--DAHLCNTHVLVDDAGNIRSTYRKMHLFDVDIPGGRSYKESSFTEAGKDIVAVDSP-V 206 (339)
Q Consensus 130 ~~A~~~~i~iv~Gs~~e~~~~--~~~~yNsa~li~p~G~v~~~y~K~~L~~~~vP~~~~~~E~~~~~~G~~~~vf~~~-~ 206 (339)
++|+++++++++|...++.++ ++++||++++|+|+|+++++|+|+|||+ |..+|.+|+...+|+++ +
T Consensus 89 ~~a~~~~i~iv~G~~ge~~~~~~~~~~yNsa~vi~p~G~i~~~Y~K~hlf~----------e~~~f~pG~~~~v~~~~~G 158 (341)
T 2uxy_A 89 RACRKANVWGVFSLTGERHEEHPRKAPYNTLVLIDNNGEIVQKYRKIIPWC----------PIEGWYPGGQTYVSEGPKG 158 (341)
T ss_dssp HHHHHHTCEEEEEEEEECCTTTTSSCCEEEEEEECTTSCEEEEEECSSCCT----------TTCCCBCCCCCCCEECGGG
T ss_pred HHHHHhCcEEEEEeeeeEcCCCCCCceEEEEEEECCCCcEEEEEEeeccCC----------CccceeCCCCceEEECCCC
Confidence 999999999999854255322 2359999999999999999999999964 44578999999999995 5
Q ss_pred cceEEEeeccCcchHHHHHHHhcCCceEEEEeCCCCCCCcHHHHHHHHHHHHHhcCcEEEEECCccCCCCCCCcceeeEE
Q 019580 207 GRLGPTVCYDLRFPELYQQLRFQHEAQVLLVPSAFTKVTGQAHWEILLRARAIETQCYVIAAAQAGKHNDKRESYGDSLI 286 (339)
Q Consensus 207 ~kigv~IC~D~~~pe~~r~~~~~~gadlll~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~an~~G~~~~~~~~~G~S~I 286 (339)
.|||++||||++|||++|.++ ++|+|+|++|++|+.. ...+|..++++||+||++||+++|++|.++ ...|+|.|+|
T Consensus 159 ~riG~~ICyD~~fpe~~r~l~-~~Gadlll~psa~~~~-~~~~~~~l~~arA~En~~~vv~an~~G~~~-~~~~~G~S~I 235 (341)
T 2uxy_A 159 MKISLIIXDDGNYPEIWRDCA-MKGAELIVRCQGYMYP-AKDQQVMMAKAMAWANNCYVAVANAAGFDG-VYSYFGHSAI 235 (341)
T ss_dssp CEEEEEEGGGGGSHHHHHHHH-HTTCSEEEEEECCBTT-CHHHHHHHHHHHHHHHTCEEEEEECEEECS-SCEEECCCEE
T ss_pred CEEEEEEccCCcCcHHHHHHH-HcCCCEEEEcCCCCCC-cHHHHHHHHHHHHHhCCcEEEEECCCCCCC-CceeeeEEEE
Confidence 599999999999999999999 7999999999998653 467899999999999999999999999764 4689999999
Q ss_pred ECCCCCeeeecCCCCCceEEEEEeehhHHHHHHhcCCcc
Q 019580 287 IDPWGTVIGRLPDRLSTGIAVADIDFSLIDSVRAKMPIA 325 (339)
Q Consensus 287 i~p~G~ii~~~~~~~~~~vl~~~id~~~~~~~r~~~~~~ 325 (339)
++|+|+++++++.+ ++++++++||++.++..|..+++.
T Consensus 236 idp~G~vla~~~~~-~e~il~a~id~~~~~~~R~~~~~~ 273 (341)
T 2uxy_A 236 IGFDGRTLGECGEE-EMGIQYAQLSLSQIRDARANDQSQ 273 (341)
T ss_dssp ECTTSCEEEECCSC-TTCEEEEEEEHHHHHHHHHHCCTT
T ss_pred ECCCCCEEEECCCC-CCEEEEEEEcHHHHHHHHhhcchh
Confidence 99999999999875 789999999999999999888864
No 12
>3ilv_A Glutamine-dependent NAD(+) synthetase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.79A {Cytophaga hutchinsonii atcc 33406}
Probab=100.00 E-value=3.8e-44 Score=361.30 Aligned_cols=251 Identities=21% Similarity=0.222 Sum_probs=204.3
Q ss_pred cccEEEEEEecCc-CCHHHHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhc-Cc
Q 019580 60 SSVRVAVAQMTSI-NDLAANFATSSRLVKEAASAGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARES-RV 137 (339)
Q Consensus 60 ~~~rVA~vQ~~~~-~d~~~n~~~~~~~i~~A~~~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~-~i 137 (339)
++||||++|+++. +|++.|++++.+++++|+++|+|||||||++ ++||...++. .++.+.++..+.++++|+++ ++
T Consensus 4 ~~~rVA~~Q~~~~~~d~~~N~~~i~~~i~~A~~~gadLvVfPEl~-ltGY~~~dl~-~~~~~~~~~~~~l~~la~~~~~i 81 (634)
T 3ilv_A 4 STIRIGGAAVNQTPIDWENNVKNILDAIEEAKNANVEILCLPELC-ITGYGCEDLF-LTDWVAETAIEYCFEIAASCTDI 81 (634)
T ss_dssp CEEEEEEEEECCCTTCHHHHHHHHHHHHHHHHHTTCSEEECCTTT-TTCSCCGGGG-GSHHHHHHHHHHHHHHHTTCTTS
T ss_pred CCeEEEEEeCCCCCCCHHHHHHHHHHHHHHHHHCCCcEEEcCCCc-cccCChHHHh-hChhhhHHHHHHHHHHHHhCCCC
Confidence 5799999999975 8999999999999999999999999999997 6899887754 34445567889999999996 99
Q ss_pred EEEEeeeeeecCCCCceEEEEEEEcCCCceeeeeeecccccccCCCCCcccccccccCCCce----------------EE
Q 019580 138 WLSLGGFQEKGSDDAHLCNTHVLVDDAGNIRSTYRKMHLFDVDIPGGRSYKESSFTEAGKDI----------------VA 201 (339)
Q Consensus 138 ~iv~Gs~~e~~~~~~~~yNsa~li~p~G~v~~~y~K~~L~~~~vP~~~~~~E~~~~~~G~~~----------------~v 201 (339)
+|++| .+++ .++++||+++++ ++|++++.|+|+|| |++..|.|.++|++|+.. .+
T Consensus 82 ~ivvG-~p~~--~~~~lyNsa~vi-~~G~il~~y~K~hL-----~~~~~f~E~r~f~pG~~~~~~~~~~~g~~~p~g~~v 152 (634)
T 3ilv_A 82 TVSLG-LPMR--IAGITYNCVCLV-ENGIVKGFSAKQFL-----ANEGVHYETRWFTAWPRNHTTTFLYNDVKYPFGDVL 152 (634)
T ss_dssp EEEEE-EEEE--ETTEEEEEEEEE-ETTEEEEEEECSSC-----CCSTTCCGGGTCCCCCTTCEEEEEETTEEEEEESCC
T ss_pred EEEEe-eeEe--eCCCccEEEEEE-ECCeEEEEEcCEeC-----CCCCCcChhhhcCCCCccccceecccCcccccCCeE
Confidence 99999 5555 467899999999 69999999999999 666667899999999875 68
Q ss_pred EecCCcceEEEeeccCcchH-HHHHHHhcCCceEEEEeCCCCCCCcH-HHHHHHHHHHHHhcCcEEEEECCccCCCCCCC
Q 019580 202 VDSPVGRLGPTVCYDLRFPE-LYQQLRFQHEAQVLLVPSAFTKVTGQ-AHWEILLRARAIETQCYVIAAAQAGKHNDKRE 279 (339)
Q Consensus 202 f~~~~~kigv~IC~D~~~pe-~~r~~~~~~gadlll~ps~~~~~~~~-~~~~~~~~~rA~en~~~vv~an~~G~~~~~~~ 279 (339)
|+++++|||++||||+|||+ +++.++ .+|||+|++|++|+...+. .+|..+++.||+||+++++++|++|.+++...
T Consensus 153 f~~~g~~iG~~IC~D~~fPe~~~r~la-~~GAdii~~psas~~~~gk~~~~~~l~~~rA~e~~~~vv~aN~~G~~~~~~~ 231 (634)
T 3ilv_A 153 YNVKDARIGFEICEDAWRTDRVGIRHY-EKGATLVLNPSASHFAFGKSAIRYDLVIGGSERFDCTYVYANLLGNEAGRMI 231 (634)
T ss_dssp EEETTEEEEECCTTC----------CG-GGTCSEEEEEECCBCCTTHHHHHHHHHHHHHHHTTSEEEEEECEEESSSSCE
T ss_pred EEECCEEEEEEEeccccCChHHHHHHH-HCCCcEEEEecCCccccCcHHHHHHHHHHHHHHhCCEEEEEcCccCCCCceE
Confidence 99999999999999999998 899998 8999999999999876554 68889999999999999999999999877789
Q ss_pred cceeeEEECCCCCeeeecCCCC--CceEEEEEeehhHHHHHHhcCC
Q 019580 280 SYGDSLIIDPWGTVIGRLPDRL--STGIAVADIDFSLIDSVRAKMP 323 (339)
Q Consensus 280 ~~G~S~Ii~p~G~ii~~~~~~~--~~~vl~~~id~~~~~~~r~~~~ 323 (339)
|.|+|+|+ |+|+++++++.+. ++++++++||++.++..|.+++
T Consensus 232 f~G~S~I~-p~G~vla~~~~f~~~~~~vi~a~iDl~~~~~~R~~~~ 276 (634)
T 3ilv_A 232 YDGEVLIA-HKGKLIQRNDRLSFKNVNLIYADIATDSAETPETVLT 276 (634)
T ss_dssp EECCEEEE-ETTEEEEECCSSCSSSEEEEEEEEEC-----------
T ss_pred EcceEEEE-cCCeEEEECCCCCCCCceEEEEEEEhHHhHHHHhcCC
Confidence 99999887 9999999998752 3689999999999988887654
No 13
>3n05_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, protein structure initiative, P nysgrc; 2.35A {Streptomyces avermitilis}
Probab=100.00 E-value=5.2e-44 Score=358.45 Aligned_cols=245 Identities=24% Similarity=0.283 Sum_probs=215.6
Q ss_pred CcccEEEEEEecCc-CCHHHHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhc--
Q 019580 59 ASSVRVAVAQMTSI-NDLAANFATSSRLVKEAASAGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARES-- 135 (339)
Q Consensus 59 ~~~~rVA~vQ~~~~-~d~~~n~~~~~~~i~~A~~~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~-- 135 (339)
.++||||++|+++. +|++.|++++.+++++|.++|+|||||||++ ++||...++.... .+..+..+.++++|+++
T Consensus 2 ~~~~rvA~~Q~~~~~~d~~~N~~~i~~~i~~A~~~gadLvvfPEl~-ltGy~~~dl~~~~-~~~~~~~~~l~~la~~~~~ 79 (590)
T 3n05_A 2 SLQLRLALNQIDSTVGDIAGNAEAILRWTRHSAEQGAHLVAFPEMA-LTGYPVEDLALRS-SFVEASRTALRELAARLAE 79 (590)
T ss_dssp CEEEEEEEEECCCCTTCHHHHHHHHHHHHHHHHTTTCSEEECCTTT-TTCSCCGGGGGCH-HHHHHHHHHHHHHHHHHHH
T ss_pred CCccEEEEEeCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEcCccc-ccCCChHHHhhCH-HHHHHHHHHHHHHHHhhhh
Confidence 35799999999975 9999999999999999999999999999997 6899887754322 23456788999999998
Q ss_pred C----cEEEEeeeeeecCCC--------CceEEEEEEEcCCCceeeeeeecccccccCCCCCcccccccccCCCceEEEe
Q 019580 136 R----VWLSLGGFQEKGSDD--------AHLCNTHVLVDDAGNIRSTYRKMHLFDVDIPGGRSYKESSFTEAGKDIVAVD 203 (339)
Q Consensus 136 ~----i~iv~Gs~~e~~~~~--------~~~yNsa~li~p~G~v~~~y~K~~L~~~~vP~~~~~~E~~~~~~G~~~~vf~ 203 (339)
+ ++|++|+..... ++ +++||++++++ +|++++.|+|+|| |++..|.|..+|++|+.+.+|+
T Consensus 80 ~~~~~i~ivvG~~~~~~-~~~~~~~~~~~~lyNsa~vi~-~G~i~~~y~K~~L-----~~~~~f~E~r~f~~G~~~~v~~ 152 (590)
T 3n05_A 80 EGFGELPVLVGYLDRSE-SAQPKYGQPAGAPRNAAAVLH-RGRVALTFAKHHL-----PNYGVFDEFRYFVPGDTMPIVR 152 (590)
T ss_dssp TTCTTSCEEEEEEEECS-SCBTTTTBCTTCEEEEEEEEE-TTEEEEEEECCCC-----CSSSSCCHHHHCCCCCEEEEEE
T ss_pred ccCCceEEEEeeEEEEc-CcccccccccCCeeEEEEEEe-CCEEEEEEeCccC-----CCCCccCccccccCCCcceEEE
Confidence 6 999999654431 21 47999999999 9999999999999 6666678999999999999999
Q ss_pred cCCcceEEEeeccCcc-hHHHHHHHhcCCceEEEEeCCCCCCCc-HHHHHHHHHHHHHhcCcEEEEECCccCCCCCCCcc
Q 019580 204 SPVGRLGPTVCYDLRF-PELYQQLRFQHEAQVLLVPSAFTKVTG-QAHWEILLRARAIETQCYVIAAAQAGKHNDKRESY 281 (339)
Q Consensus 204 ~~~~kigv~IC~D~~~-pe~~r~~~~~~gadlll~ps~~~~~~~-~~~~~~~~~~rA~en~~~vv~an~~G~~~~~~~~~ 281 (339)
++++|||++||||+|| |++.+.++ .+|||+|++|++|+...+ ..+|..+++.||+||+++++++|++|.+ +...|.
T Consensus 153 ~~g~~iG~~IC~D~~f~pe~~~~la-~~Ga~ii~~psa~p~~~gk~~~~~~l~~~rA~e~~~~vv~an~~G~~-~~~~f~ 230 (590)
T 3n05_A 153 LHGVDIALAICEDLWQDGGRVPAAR-SAGAGLLLSVNASPYERDKDDTRLELVRKRAQEAGCTTAYLAMIGGQ-DELVFD 230 (590)
T ss_dssp ETTEEEEEEEGGGGGSTTSHHHHHH-HTTCSEEEEEECCBCCCCSSCHHHHHHHHHHHHHTSEEEEEECEEEE-TTEEEE
T ss_pred ECCEEEEEEeehhhccCChHHHHHH-HcCCCEEEEecCCccccCcHHHHHHHHHHHHHHhCCEEEEEecccCC-CCeEEe
Confidence 9999999999999999 99999999 899999999999987654 3678899999999999999999999986 457899
Q ss_pred eeeEEECCCCCeeeecCCCCCceEEEEEeehhHH
Q 019580 282 GDSLIIDPWGTVIGRLPDRLSTGIAVADIDFSLI 315 (339)
Q Consensus 282 G~S~Ii~p~G~ii~~~~~~~~~~vl~~~id~~~~ 315 (339)
|+|+|++|+|+++++++.+ ++++++++||++.+
T Consensus 231 G~S~iidp~G~vla~~~~~-~e~~~~~didl~~~ 263 (590)
T 3n05_A 231 GDSIVVDRDGEVVARAPQF-SEGCVVLDLDLPAA 263 (590)
T ss_dssp BCCEEECTTSCEEEECCBT-SCEEEEEEEEECCC
T ss_pred CcEEEECCCCcEEEEcCCC-CCcEEEEEEccccc
Confidence 9999999999999999887 79999999998866
No 14
>4f4h_A Glutamine dependent NAD+ synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ligase; 1.75A {Burkholderia thailandensis}
Probab=100.00 E-value=8.5e-43 Score=346.71 Aligned_cols=242 Identities=24% Similarity=0.299 Sum_probs=207.8
Q ss_pred ccEEEEEEecC-cCCHHHHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHH----hc
Q 019580 61 SVRVAVAQMTS-INDLAANFATSSRLVKEAASAGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLAR----ES 135 (339)
Q Consensus 61 ~~rVA~vQ~~~-~~d~~~n~~~~~~~i~~A~~~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~----~~ 135 (339)
+||||++|+++ .+|++.|++++++++++|+++|||||||||++ ++||.+.++.. .+.+.....+.+.++++ ..
T Consensus 6 kmKIAlaQln~~vGD~~~N~~~i~~~i~~Aa~~GAdLvvfPEL~-ltGY~~~Dl~~-~~~~~~~~~~~l~~la~~~~~~~ 83 (565)
T 4f4h_A 6 KTRIALAQLNVTVGDFAGNVAKIVAAAQAAHDAGAHFLIAPELA-LSGYPPEDLLL-RPAFYAASDAALAELAAQLKPFA 83 (565)
T ss_dssp CEEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCSEEECCTTT-TTCSCCGGGGG-CHHHHHHHHHHHHHHHHHHTTST
T ss_pred ceEEEEEECCCCcccHHHHHHHHHHHHHHHHHCCCcEEECCCCc-ccCCChHHhhh-CHHHHHHHHHHHHHHHHHhhhcC
Confidence 59999999997 49999999999999999999999999999998 69998877532 22222233344444443 35
Q ss_pred CcEEEEeeeeeecC-------------CCCceEEEEEEEcCCCceeeeeeecccccccCCCCCcccccccccCCCceEEE
Q 019580 136 RVWLSLGGFQEKGS-------------DDAHLCNTHVLVDDAGNIRSTYRKMHLFDVDIPGGRSYKESSFTEAGKDIVAV 202 (339)
Q Consensus 136 ~i~iv~Gs~~e~~~-------------~~~~~yNsa~li~p~G~v~~~y~K~~L~~~~vP~~~~~~E~~~~~~G~~~~vf 202 (339)
++.|++|....... .++++||+++++. +|++++.|+|+|| |+++.|.|.++|.+|+.+.+|
T Consensus 84 ~i~ivvG~p~~~~~~~~~~~~~~~~~~~~~~lyNsa~vi~-~G~i~~~y~K~hL-----p~~~~f~E~r~f~~G~~~~v~ 157 (565)
T 4f4h_A 84 GLAVLVGHPLRAPSADGNANRAIERGVPPVDTYNAASLIV-GGEVAGTYRKQDL-----PNTEVFDEKRYFATDAAPYVF 157 (565)
T ss_dssp TCEEEEEEEEECC-----CCCCCCTTSCCCSEEEEEEEEE-TTEEEEEEECCSC-----CCSTTCCGGGTCCCCCCCCEE
T ss_pred CcEEEEeeeeeecccccccccceecccCCCceEEEEEEEE-CCEEEEEEeeeec-----CCCcccceeccccCCCcceeE
Confidence 89999995433211 1246999999998 7999999999998 888889999999999999999
Q ss_pred ecCCcceEEEeeccCcchHHHHHHHhcCCceEEEEeCCCCCCCcH-HHHHHHHHHHHHhcCcEEEEECCccCCCCCCCcc
Q 019580 203 DSPVGRLGPTVCYDLRFPELYQQLRFQHEAQVLLVPSAFTKVTGQ-AHWEILLRARAIETQCYVIAAAQAGKHNDKRESY 281 (339)
Q Consensus 203 ~~~~~kigv~IC~D~~~pe~~r~~~~~~gadlll~ps~~~~~~~~-~~~~~~~~~rA~en~~~vv~an~~G~~~~~~~~~ 281 (339)
+++++|||+.||||+||||.++.++ .+||++|++|++++...++ .+|..+++.||+||+++++++|.+|.++ +..|+
T Consensus 158 ~~~g~~iGv~IC~Dlwfpe~~r~la-~~GA~ii~~psAs~~~~gk~~~r~~ll~arA~e~~~~vvy~N~vG~~~-~~~f~ 235 (565)
T 4f4h_A 158 ELNGVKFGVVICEDVWHASAAQLAK-AAGAQVLIVPNGSPYHMNKDAVRIDILRARIRETGLPMVYVNLVGGQD-ELVFD 235 (565)
T ss_dssp EETTEEEEECCGGGGGSSHHHHHHH-HTTCSEEEEEECCBCCTTHHHHHHHHHHHHHHHHCCCEEEEECEEEET-TEEEE
T ss_pred EecCcEEEEEEeehhcccchhHHHH-hCCCeeeecccccccccCcHHHHHHHHHHHHHHhCCcEEEeeeecCCC-CeEEE
Confidence 9999999999999999999999999 8999999999999887765 7888999999999999999999999875 47899
Q ss_pred eeeEEECCCCCeeeecCCCCCceEEEEEeehh
Q 019580 282 GDSLIIDPWGTVIGRLPDRLSTGIAVADIDFS 313 (339)
Q Consensus 282 G~S~Ii~p~G~ii~~~~~~~~~~vl~~~id~~ 313 (339)
|+|+|++|+|+++++++.+ +++++++++|..
T Consensus 236 G~S~iidp~G~vla~~~~f-~e~~~~~d~d~~ 266 (565)
T 4f4h_A 236 GGSFVLDGAGELVAKMPQF-EEGNAIVEFDGA 266 (565)
T ss_dssp BCCEEECTTSCEEEECCBS-CCEEEEEEEETT
T ss_pred CCcceecCCCcEEEEcccc-ccceEEEEeccc
Confidence 9999999999999999998 899999999865
No 15
>3sdb_A Glutamine-dependent NAD(+) synthetase; glutamine-amidotransferase, glutaminase, glutamine-dependent synthetase, ligase; 2.00A {Mycobacterium tuberculosis} PDB: 3seq_A* 3sez_A* 3szg_A* 3dla_A* 3syt_A*
Probab=100.00 E-value=4.8e-42 Score=347.69 Aligned_cols=258 Identities=22% Similarity=0.211 Sum_probs=217.0
Q ss_pred cccEEEEEEecCc-CCHHHHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCcchhhhhccC--CchHHHHHHHHHHhcC
Q 019580 60 SSVRVAVAQMTSI-NDLAANFATSSRLVKEAASAGAKLLCLPENFSYVGDKDGDSLKVAETL--DGPIMQGYCSLARESR 136 (339)
Q Consensus 60 ~~~rVA~vQ~~~~-~d~~~n~~~~~~~i~~A~~~gadlIVfPE~~~~~g~~~~~~~~~a~~~--~~~~~~~l~~~A~~~~ 136 (339)
+.||||++|+++. +|++.|++++.+++++|+++|+|||||||++ ++||...++....... ..+.++.|+++|++++
T Consensus 11 g~~rVAl~Q~~~~~~D~~~N~~~i~~~i~~A~~~gadLvVfPEl~-ltGY~~~dl~~~~~~~~~~~~~l~~l~~~a~~~~ 89 (680)
T 3sdb_A 11 GFVRVAACTHHTTIGDPAANAASVLDMARACHDDGAALAVFPELT-LSGYSIEDVLLQDSLLDAVEDALLDLVTESADLL 89 (680)
T ss_dssp TEEEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCSEEECCTTT-TTCGGGGGGGGCHHHHHHHHHHHHHHHHHHTTCS
T ss_pred CCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEcCCCc-ccCCChHHHhhCHHHHHhhHHHHHHHHHHhhcCC
Confidence 5799999999985 9999999999999999999999999999997 6899876643322211 2467889999999999
Q ss_pred cEEEEeeeeeecCCCCceEEEEEEEcCCCceeeeeeecccccccCCCCCcccccccccCCCce----------------E
Q 019580 137 VWLSLGGFQEKGSDDAHLCNTHVLVDDAGNIRSTYRKMHLFDVDIPGGRSYKESSFTEAGKDI----------------V 200 (339)
Q Consensus 137 i~iv~Gs~~e~~~~~~~~yNsa~li~p~G~v~~~y~K~~L~~~~vP~~~~~~E~~~~~~G~~~----------------~ 200 (339)
++|++|. +++ .++++||++++++ +|++++.|+|+|| |++..|.|.++|++|+.. .
T Consensus 90 i~ivvG~-p~~--~~~~lyNsa~vi~-~G~il~~y~K~hL-----~~~~~f~E~r~F~~G~~~~~~i~~~g~~vpfg~~~ 160 (680)
T 3sdb_A 90 PVLVVGA-PLR--HRHRIYNTAVVIH-RGAVLGVVPKSYL-----PTYREFYERRQMAPGDGERGTIRIGGADVAFGTDL 160 (680)
T ss_dssp SEEEEEE-EEE--ETTEEEEEEEEEE-TTEEEEEEECSCC-----CEETTEEGGGTEECCTTCCSEEEETTEEEEBSSCE
T ss_pred cEEEEec-eEE--eCCCceEEEEEEe-CCCEEEEEeeecC-----CCCCccChhhhcCCCCCCCceeeecCcccccCCce
Confidence 9999995 555 4679999999999 9999999999999 555567899999999874 1
Q ss_pred EE---ecCCcceEEEeeccCcchHHH-HHHHhcCCceEEEEeCCCCCCCcH-HHHHHHHHHHHHhcCcEEEEECC-ccCC
Q 019580 201 AV---DSPVGRLGPTVCYDLRFPELY-QQLRFQHEAQVLLVPSAFTKVTGQ-AHWEILLRARAIETQCYVIAAAQ-AGKH 274 (339)
Q Consensus 201 vf---~~~~~kigv~IC~D~~~pe~~-r~~~~~~gadlll~ps~~~~~~~~-~~~~~~~~~rA~en~~~vv~an~-~G~~ 274 (339)
+| +++++|||+.||||+|||+.. +.++ ++|||+|++|++|+...+. +.|..+++.+|.+++..++++|+ .|.+
T Consensus 161 vf~~~~~~g~riGv~IC~Dl~fPe~~~r~la-~~GAdiil~pSasp~~~gk~~~r~~l~~~~aar~~~~yV~a~~~~G~~ 239 (680)
T 3sdb_A 161 LFAASDLPGFVLHVEIAEDMFVPMPPSAEAA-LAGATVLANLSGSPITIGRAEDRRLLARSASARCLAAYVYAAAGEGES 239 (680)
T ss_dssp EEEETTCTTCEEEEEEGGGGGSSSCHHHHHH-HHTCCEEEEECCCCCCTTHHHHHHHHHHHHHHHTTSEEEEECCCTTSC
T ss_pred eEeeeccCCeEEEEEEeccccccccHHHHHH-hcCCeEEEEecCCccccCcHHHHHHHHHHHHHHhCCcEEEEECCcccC
Confidence 56 789999999999999999996 8888 7999999999999876665 45567778887777666666666 5655
Q ss_pred CCCCCcceeeEEECCCCCeeeecCCC-CCceEEEEEeehhHHHHHHhcCCcccCCC
Q 019580 275 NDKRESYGDSLIIDPWGTVIGRLPDR-LSTGIAVADIDFSLIDSVRAKMPIAKHRK 329 (339)
Q Consensus 275 ~~~~~~~G~S~Ii~p~G~ii~~~~~~-~~~~vl~~~id~~~~~~~r~~~~~~~~~~ 329 (339)
.++..|.|+|+|+ |+|+++++++.+ .++++++++||++.++..|.+++++++++
T Consensus 240 ~~~l~f~G~S~I~-p~G~vla~~~~f~~~e~ll~adiDl~~l~~~R~~~~~~~~~~ 294 (680)
T 3sdb_A 240 TTDLAWDGQTMIW-ENGALLAESERFPKGVRRSVADVDTELLRSERLRMGTFDDNR 294 (680)
T ss_dssp CSSCCCCCCEEEE-ETTEEEEECCSSCSSCEEEEEEEEHHHHHHHHHHCHHHHHHH
T ss_pred CCCeEEeccEEEE-cCCEEEEECCCCCCCCcEEEEEEcHHHHHHHHHhCCchhhhh
Confidence 5678999999999 999999998863 25899999999999999999988877765
No 16
>3p8k_A Hydrolase, carbon-nitrogen family; HET: PGE; 1.70A {Staphylococcus aureus subsp}
Probab=82.42 E-value=1.7 Score=38.40 Aligned_cols=68 Identities=12% Similarity=0.106 Sum_probs=42.5
Q ss_pred HHHHCCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEEEeeeeeecCCCC-ceEEEEEEEcCCCc
Q 019580 88 EAASAGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLSLGGFQEKGSDDA-HLCNTHVLVDDAGN 166 (339)
Q Consensus 88 ~A~~~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~Gs~~e~~~~~~-~~yNsa~li~p~G~ 166 (339)
....+|+|+|+.|-.|. ... . ..+...++..|.+++++++.-...-. +++ ..+-.+.+++|+|+
T Consensus 177 ~~~~~Gadli~~psa~~--~~~-~----------~~~~~~~~arA~en~~~vv~~n~~G~--~~~~~~~G~S~ii~p~G~ 241 (281)
T 3p8k_A 177 YPARSGAKIAFYVAQWP--MSR-L----------QHWHSLLKARAIENNMFVIGTNSTGF--DGNTEYAGHSIVINPNGD 241 (281)
T ss_dssp HHHHTTCCEEEEEECCB--GGG-H----------HHHHHHHHHHHHHHTSEEEEEECEEE--CSSCEEECCCEEECTTSC
T ss_pred HHHHCCCCEEEECCCCC--Ccc-H----------HHHHHHHHHHHHHcCCEEEEEccCcC--CCCcEEeeeEEEECCCCC
Confidence 44467999999997542 110 1 12444567788899999985433222 233 33345678899999
Q ss_pred eeee
Q 019580 167 IRST 170 (339)
Q Consensus 167 v~~~ 170 (339)
++..
T Consensus 242 vl~~ 245 (281)
T 3p8k_A 242 LVGE 245 (281)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8654
No 17
>3hkx_A Amidase; alpha-beta-BETA-alpha:alpha-beta-BETA-alpha dimeric sandwich hydrolase; 1.66A {Nesterenkonia SP}
Probab=81.79 E-value=6.2 Score=34.75 Aligned_cols=70 Identities=17% Similarity=0.122 Sum_probs=43.2
Q ss_pred HHHHhcCCceEEEEeCCCCCCCcH------------HHHHHHHHHHHHhcCcEEEEECCccCCCCCCCcceeeEEECCCC
Q 019580 224 QQLRFQHEAQVLLVPSAFTKVTGQ------------AHWEILLRARAIETQCYVIAAAQAGKHNDKRESYGDSLIIDPWG 291 (339)
Q Consensus 224 r~~~~~~gadlll~ps~~~~~~~~------------~~~~~~~~~rA~en~~~vv~an~~G~~~~~~~~~G~S~Ii~p~G 291 (339)
+..+ .+|+|+|+.|-.+...... ..+...+...|.+++++++..... ...+ ...+=.+.+++|+|
T Consensus 47 ~~A~-~~gadlvvfPE~~l~gy~~~d~~~~~a~~~~~~~~~~l~~~a~~~~i~iv~G~~~-~~~~-~~~yNs~~~i~~~G 123 (283)
T 3hkx_A 47 ARAS-EQGAQLLLTPELFGFGYVPSQICAQVSAEQVDAARSRLRGIARDRGIALVWSLPG-PEGP-EQRGITAELADEHG 123 (283)
T ss_dssp HHHH-HTTCSEEECCTTGGGCSCHHHHHHHCCHHHHHHHHHHHHHHHHHTTSEEEECCBC-SSCT-TTCCBEEEEECTTS
T ss_pred HHHH-HCCCCEEEcCCCcccCCChHHHHHHhccccCCHHHHHHHHHHHHhCCEEEEEEEE-EcCC-CCEEEEEEEEcCCC
Confidence 3444 6799999999543221111 123345677889999999875422 1111 23455688999999
Q ss_pred Ceeee
Q 019580 292 TVIGR 296 (339)
Q Consensus 292 ~ii~~ 296 (339)
+++..
T Consensus 124 ~i~~~ 128 (283)
T 3hkx_A 124 EVLAS 128 (283)
T ss_dssp CEEEE
T ss_pred cEEEE
Confidence 98743
No 18
>1f89_A 32.5 kDa protein YLR351C; nitrilase, dimer, structural genomics, four layer sandwich, PSI, protein structure initiative; 2.40A {Saccharomyces cerevisiae} SCOP: d.160.1.1
Probab=78.58 E-value=6.2 Score=34.74 Aligned_cols=68 Identities=15% Similarity=0.260 Sum_probs=41.3
Q ss_pred cCCceEEEEeCCCCCCCcH---------------HHHHHHHHHHHHhcCcEEEEECCccCCCCCCCcceeeEEECCCCCe
Q 019580 229 QHEAQVLLVPSAFTKVTGQ---------------AHWEILLRARAIETQCYVIAAAQAGKHNDKRESYGDSLIIDPWGTV 293 (339)
Q Consensus 229 ~~gadlll~ps~~~~~~~~---------------~~~~~~~~~rA~en~~~vv~an~~G~~~~~~~~~G~S~Ii~p~G~i 293 (339)
..|+|+|+.|-.+...... ..+...+...|.+++++++.....-..+.+...+=.+.+++|+|++
T Consensus 43 ~~gadlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~G~~~~~~~~~~~~yNs~~~i~~~G~i 122 (291)
T 1f89_A 43 QPDTKLVVLPECFNSPYSTDQFRKYSEVINPKEPSTSVQFLSNLANKFKIILVGGTIPELDPKTDKIYNTSIIFNEDGKL 122 (291)
T ss_dssp CTTEEEEECCTTTTSCSCHHHHHHHTTBCCSSSCCHHHHHHHHHHHHSSCEEECCCEEEECTTTCCEEEEEEEECTTSCE
T ss_pred cCCCeEEEcCCCcccCCChHHHHHHhhhhccCCCChHHHHHHHHHHHcCcEEEeceeecccCCCCceEEEEEEECCCCcE
Confidence 6799999999544321111 2344556777899999987643211111011345568889999998
Q ss_pred eee
Q 019580 294 IGR 296 (339)
Q Consensus 294 i~~ 296 (339)
+..
T Consensus 123 ~~~ 125 (291)
T 1f89_A 123 IDK 125 (291)
T ss_dssp EEE
T ss_pred EeE
Confidence 653
No 19
>2w1v_A Nitrilase-2, nitrilase homolog 2; hydrolase; 1.49A {Mus musculus}
Probab=76.75 E-value=2.6 Score=36.98 Aligned_cols=71 Identities=17% Similarity=0.179 Sum_probs=41.2
Q ss_pred HHHHHCCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEEEeeeeeecCCCCceEEEEEEEcCCCc
Q 019580 87 KEAASAGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLSLGGFQEKGSDDAHLCNTHVLVDDAGN 166 (339)
Q Consensus 87 ~~A~~~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~Gs~~e~~~~~~~~yNsa~li~p~G~ 166 (339)
+....+|+|+|+.|-.+. ..... ..+...++..|.+++++++.-...-....+...+-.+.+++|+|+
T Consensus 163 r~~~~~ga~ll~~ps~~~---~~~~~---------~~~~~~~~~rA~en~~~vv~~n~~G~~~~~~~~~G~S~ii~p~G~ 230 (276)
T 2w1v_A 163 QIYAQRGCQLLVYPGAFN---LTTGP---------AHWELLQRARAVDNQVYVATASPARDDKASYVAWGHSTVVDPWGQ 230 (276)
T ss_dssp HHHHHTTEEEEEEECCCC---TTHHH---------HHHHHHHHHHHHHHTCEEEEECCCCCTTSSSCCCCCCEEECTTSC
T ss_pred HHHHHcCCCEEEECCcCC---CcCCH---------HHHHHHHHHHHHHcCcEEEEecccccCCCCceeeeEeEEECCCCC
Confidence 344467999999997432 11100 123445677788999999764322110011223345678899998
Q ss_pred eee
Q 019580 167 IRS 169 (339)
Q Consensus 167 v~~ 169 (339)
++.
T Consensus 231 v~~ 233 (276)
T 2w1v_A 231 VLT 233 (276)
T ss_dssp EEE
T ss_pred EeE
Confidence 864
No 20
>2dyu_A Formamidase; AMIF, CEK, catalytic triad, helicobacter pylori aliphatic amidase, hydrolase; 1.75A {Helicobacter pylori} PDB: 2dyv_A 2e2l_A 2e2k_A
Probab=76.44 E-value=4.1 Score=36.99 Aligned_cols=71 Identities=13% Similarity=0.048 Sum_probs=43.5
Q ss_pred HHHHHHHCCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEEEeeeeeecCCCCceEEEEEEEcCC
Q 019580 85 LVKEAASAGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLSLGGFQEKGSDDAHLCNTHVLVDDA 164 (339)
Q Consensus 85 ~i~~A~~~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~Gs~~e~~~~~~~~yNsa~li~p~ 164 (339)
+.+....+|+|+|+.|-.+. .... ..+...++..|.+++++++.-...-. .++...+=.+.+++|+
T Consensus 174 ~~r~~~~~Gadlil~psaw~---~~~~----------~~~~~~~~arA~En~~~vv~an~~G~-~~~~~~~G~S~Iidp~ 239 (334)
T 2dyu_A 174 LAREAAYKGCNVYIRISGYS---TQVN----------DQWILTNRSNAWHNLMYTVSVNLAGY-DNVFYYFGEGQICNFD 239 (334)
T ss_dssp HHHHHHHTTCSEEEEEESSC---TTSH----------HHHHHHHHHHHHHHTCEEEEEECSBS-SSSCCCCCEEEEECTT
T ss_pred HHHHHHHcCCCEEEEeCCCC---CCcH----------HHHHHHHHHHHHhCCCEEEEECCCcC-CCCeeeeeEEEEECCC
Confidence 34444557999999997542 1111 12455677888899999976422111 1122344567788999
Q ss_pred Cceee
Q 019580 165 GNIRS 169 (339)
Q Consensus 165 G~v~~ 169 (339)
|+++.
T Consensus 240 G~vla 244 (334)
T 2dyu_A 240 GTTLV 244 (334)
T ss_dssp SCEEE
T ss_pred CCEee
Confidence 99865
No 21
>2uxy_A Aliphatic amidase; nitrilase superfamily, hydrolase, acyl transfer, thiol enzymes, hydroxamic acid; HET: C3Y; 1.25A {Pseudomonas aeruginosa} PDB: 2plq_A
Probab=76.07 E-value=4 Score=37.16 Aligned_cols=71 Identities=10% Similarity=0.134 Sum_probs=44.1
Q ss_pred HHHHHHHCCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEEEeeeeeecCCCC-ceEEEEEEEcC
Q 019580 85 LVKEAASAGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLSLGGFQEKGSDDA-HLCNTHVLVDD 163 (339)
Q Consensus 85 ~i~~A~~~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~Gs~~e~~~~~~-~~yNsa~li~p 163 (339)
+.+....+|+|+|+.|-.|. +... ..+...++..|.+++++++.-...-. +++ ..+-.+.+++|
T Consensus 174 ~~r~l~~~Gadlll~psa~~---~~~~----------~~~~~l~~arA~En~~~vv~an~~G~--~~~~~~~G~S~Iidp 238 (341)
T 2uxy_A 174 IWRDCAMKGAELIVRCQGYM---YPAK----------DQQVMMAKAMAWANNCYVAVANAAGF--DGVYSYFGHSAIIGF 238 (341)
T ss_dssp HHHHHHHTTCSEEEEEECCB---TTCH----------HHHHHHHHHHHHHHTCEEEEEECEEE--CSSCEEECCCEEECT
T ss_pred HHHHHHHcCCCEEEEcCCCC---CCcH----------HHHHHHHHHHHHhCCcEEEEECCCCC--CCCceeeeEEEEECC
Confidence 34444568999999997642 1111 12455678888999999976432221 222 23335678899
Q ss_pred CCceeee
Q 019580 164 AGNIRST 170 (339)
Q Consensus 164 ~G~v~~~ 170 (339)
+|+++..
T Consensus 239 ~G~vla~ 245 (341)
T 2uxy_A 239 DGRTLGE 245 (341)
T ss_dssp TSCEEEE
T ss_pred CCCEEEE
Confidence 9998653
No 22
>2vhh_A CG3027-PA; hydrolase; 2.8A {Drosophila melanogaster} PDB: 2vhi_A
Probab=75.41 E-value=7.4 Score=36.37 Aligned_cols=73 Identities=11% Similarity=0.144 Sum_probs=43.0
Q ss_pred HHHHHHhcCCceEEEEeCCCCCCC---c--------------HHHHHHHHHHHHHhcCcEEEEECCccCCCCCCCcceee
Q 019580 222 LYQQLRFQHEAQVLLVPSAFTKVT---G--------------QAHWEILLRARAIETQCYVIAAAQAGKHNDKRESYGDS 284 (339)
Q Consensus 222 ~~r~~~~~~gadlll~ps~~~~~~---~--------------~~~~~~~~~~rA~en~~~vv~an~~G~~~~~~~~~G~S 284 (339)
+.+..+ ..|+|+|+.|-.+.... . .......+...|.+++++|+.....-....+..++=.+
T Consensus 104 li~~A~-~~gadLVVfPE~~l~gy~~~~~~~~~~~~~ae~~~~~~~~~~l~~lA~~~~i~Iv~G~~e~~~~~~~~~yNsa 182 (405)
T 2vhh_A 104 MIKAAA-EAGCNIVCTQEAWTMPFAFCTREKFPWCEFAEEAENGPTTKMLAELAKAYNMVIIHSILERDMEHGETIWNTA 182 (405)
T ss_dssp HHHHHH-HTTCSEEECCTTTTSCSCC---------CCCBCTTTSHHHHHHHHHHHHTTCEEEEEEEEEETTTTTEEEEEE
T ss_pred HHHHHH-HCCCCEEEcCCcccccccccccchhhHHHHHhhccCCHHHHHHHHHHHHCCEEEEEeceecccCCCCcEEEEE
Confidence 344444 67999999995432110 0 11233456778889999998643210100012345568
Q ss_pred EEECCCCCeee
Q 019580 285 LIIDPWGTVIG 295 (339)
Q Consensus 285 ~Ii~p~G~ii~ 295 (339)
.+++|+|+++.
T Consensus 183 ~vi~p~G~i~~ 193 (405)
T 2vhh_A 183 VVISNSGRYLG 193 (405)
T ss_dssp EEECTTSCEEE
T ss_pred EEECCCCeEEE
Confidence 88999999764
No 23
>4f4h_A Glutamine dependent NAD+ synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ligase; 1.75A {Burkholderia thailandensis}
Probab=75.08 E-value=3.2 Score=40.75 Aligned_cols=73 Identities=16% Similarity=0.183 Sum_probs=46.6
Q ss_pred HHHHHHCCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEEEeeeeeecCCCCceEEEEEEEcCCC
Q 019580 86 VKEAASAGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLSLGGFQEKGSDDAHLCNTHVLVDDAG 165 (339)
Q Consensus 86 i~~A~~~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~Gs~~e~~~~~~~~yNsa~li~p~G 165 (339)
.+.+...|||+|+.|=.+. +...+. ......++..|.+++++++.-...-.. ++-..+..+++++|+|
T Consensus 178 ~r~la~~GA~ii~~psAs~---~~~gk~--------~~r~~ll~arA~e~~~~vvy~N~vG~~-~~~~f~G~S~iidp~G 245 (565)
T 4f4h_A 178 AQLAKAAGAQVLIVPNGSP---YHMNKD--------AVRIDILRARIRETGLPMVYVNLVGGQ-DELVFDGGSFVLDGAG 245 (565)
T ss_dssp HHHHHHTTCSEEEEEECCB---CCTTHH--------HHHHHHHHHHHHHHCCCEEEEECEEEE-TTEEEEBCCEEECTTS
T ss_pred hHHHHhCCCeeeecccccc---cccCcH--------HHHHHHHHHHHHHhCCcEEEeeeecCC-CCeEEECCcceecCCC
Confidence 3445568999999997642 221111 124456788899999998764322221 2234557789999999
Q ss_pred ceeee
Q 019580 166 NIRST 170 (339)
Q Consensus 166 ~v~~~ 170 (339)
+++..
T Consensus 246 ~vla~ 250 (565)
T 4f4h_A 246 ELVAK 250 (565)
T ss_dssp CEEEE
T ss_pred cEEEE
Confidence 98654
No 24
>3ivz_A Nitrilase; alpha-beta sandwich, hydrolase; 1.57A {Pyrococcus abyssi} SCOP: d.160.1.2 PDB: 3iw3_A 3ki8_A 3klc_A 1j31_A
Probab=74.19 E-value=5.1 Score=34.75 Aligned_cols=67 Identities=13% Similarity=0.162 Sum_probs=41.7
Q ss_pred HHHHHHCCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEEEeeeeeecCCCCc-eEEEEEEEcCC
Q 019580 86 VKEAASAGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLSLGGFQEKGSDDAH-LCNTHVLVDDA 164 (339)
Q Consensus 86 i~~A~~~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~Gs~~e~~~~~~~-~yNsa~li~p~ 164 (339)
.+....+|+|+|+.|=.+.. . . +...++..|.+++++++.-...-. +++. .+-.+.+++|+
T Consensus 155 ~r~~~~~ga~li~~ps~~~~---~--~-----------~~~~~~~rA~en~~~vv~~n~~G~--~~~~~~~G~S~ii~p~ 216 (262)
T 3ivz_A 155 ARTLALKGADVIAHPANLVM---P--Y-----------APRAMPIRALENKVYTVTADRVGE--ERGLKFIGKSLIASPK 216 (262)
T ss_dssp HHHHHHTTCSEEEEEECCCS---S--C-----------HHHHHHHHHHHHTCEEEEEECCSE--ETTEECCCCCEEECTT
T ss_pred HHHHHHCCCCEEEEcCCCCc---h--H-----------HHHHHHHHHHhcCcEEEEECCCCc--CCCceEeeeEEEECCC
Confidence 34455679999999986521 1 1 344567888899999976432111 1111 22346788999
Q ss_pred Cceeee
Q 019580 165 GNIRST 170 (339)
Q Consensus 165 G~v~~~ 170 (339)
|+++..
T Consensus 217 G~il~~ 222 (262)
T 3ivz_A 217 AEVLSM 222 (262)
T ss_dssp SCEEEE
T ss_pred CCEeec
Confidence 988644
No 25
>2e11_A Hydrolase; dimethylarsenic inhibi complex, cacodylate; 1.73A {Xanthomonas campestris PV}
Probab=70.70 E-value=6.7 Score=33.97 Aligned_cols=63 Identities=13% Similarity=0.059 Sum_probs=40.0
Q ss_pred CCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEEEeeeeeecCCCC--ceEEEEEEEcCCCceeee
Q 019580 93 GAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLSLGGFQEKGSDDA--HLCNTHVLVDDAGNIRST 170 (339)
Q Consensus 93 gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~Gs~~e~~~~~~--~~yNsa~li~p~G~v~~~ 170 (339)
|+|+|+.|-.|. .. .. ..+...++..|.+++++++.-...-. +++ ...-.+.+++|+|+++..
T Consensus 165 ga~~i~~~s~w~--~~-~~----------~~~~~~~~~rA~en~~~vv~an~~G~--~~~~~~~~G~S~ii~p~G~v~~~ 229 (266)
T 2e11_A 165 DFDLQLFVANWP--SA-RA----------YAWKTLLRARAIENLCFVAAVNRVGV--DGNQLHYAGDSAVIDFLGQPQVE 229 (266)
T ss_dssp SCSEEEEEECCC--GG-GH----------HHHHHHHHHHHHHTTSEEEEEECEEE--CTTSCEEEEEEEEECTTSCEEEE
T ss_pred CCcEEEEeCCCC--CC-ch----------HHHHHHHHHHHHhcCcEEEEEcCCcC--CCCCceEeeeEEEECCCCceeee
Confidence 999999998642 11 00 12445677889999999976432222 222 334467889999998643
No 26
>3n05_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, protein structure initiative, P nysgrc; 2.35A {Streptomyces avermitilis}
Probab=69.89 E-value=9.6 Score=37.47 Aligned_cols=71 Identities=21% Similarity=0.201 Sum_probs=44.0
Q ss_pred HHHHHCCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEEEeeeeeecCCCCceE-EEEEEEcCCC
Q 019580 87 KEAASAGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLSLGGFQEKGSDDAHLC-NTHVLVDDAG 165 (339)
Q Consensus 87 ~~A~~~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~Gs~~e~~~~~~~~y-Nsa~li~p~G 165 (339)
+....+|+|||+.|=.+... ..+ .......++..|.+++++++.-...-. +++..| -.+++++|+|
T Consensus 174 ~~la~~Ga~ii~~psa~p~~---~gk--------~~~~~~l~~~rA~e~~~~vv~an~~G~--~~~~~f~G~S~iidp~G 240 (590)
T 3n05_A 174 PAARSAGAGLLLSVNASPYE---RDK--------DDTRLELVRKRAQEAGCTTAYLAMIGG--QDELVFDGDSIVVDRDG 240 (590)
T ss_dssp HHHHHTTCSEEEEEECCBCC---CCS--------SCHHHHHHHHHHHHHTSEEEEEECEEE--ETTEEEEBCCEEECTTS
T ss_pred HHHHHcCCCEEEEecCCccc---cCc--------HHHHHHHHHHHHHHhCCEEEEEecccC--CCCeEEeCcEEEECCCC
Confidence 34456799999999764321 111 112456688889999999976432221 223333 3567889999
Q ss_pred ceeee
Q 019580 166 NIRST 170 (339)
Q Consensus 166 ~v~~~ 170 (339)
+++..
T Consensus 241 ~vla~ 245 (590)
T 3n05_A 241 EVVAR 245 (590)
T ss_dssp CEEEE
T ss_pred cEEEE
Confidence 88654
No 27
>1ems_A Nitfhit, NIT-fragIle histidine triad fusion protein; WORM, nitrilase, nucleotide-binding protein, cancer; 2.80A {Caenorhabditis elegans} SCOP: d.13.1.1 d.160.1.1
Probab=69.28 E-value=12 Score=35.12 Aligned_cols=72 Identities=14% Similarity=0.270 Sum_probs=43.0
Q ss_pred HHHHHhcCCceEEEEeCCCCCCC-cH-----------HHHHHHHHHHHHhcCcEEEEECCc--cCCCCCCCcceeeEEEC
Q 019580 223 YQQLRFQHEAQVLLVPSAFTKVT-GQ-----------AHWEILLRARAIETQCYVIAAAQA--GKHNDKRESYGDSLIID 288 (339)
Q Consensus 223 ~r~~~~~~gadlll~ps~~~~~~-~~-----------~~~~~~~~~rA~en~~~vv~an~~--G~~~~~~~~~G~S~Ii~ 288 (339)
.+..+ .+|+|+|+.|-.+.... .. ......+...|.+++++++..... -. ..+...+=.+.+++
T Consensus 39 i~~A~-~~gadlvv~PE~~~~~~~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~G~~~~~e~-~~~~~~yNs~~~i~ 116 (440)
T 1ems_A 39 IERAG-EKKCEMVFLPECFDFIGLNKNEQIDLAMATDCEYMEKYRELARKHNIWLSLGGLHHKDP-SDAAHPWNTHLIID 116 (440)
T ss_dssp HHHHH-HTTCSEEEECTTCSCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEET-TEEEEEEEEEEEEC
T ss_pred HHHHH-HCCCCEEECCCcccccCcchhHHHHhhccCCCHHHHHHHHHHHHcCeEEEecccccccc-CCCCcEEEEEEEEC
Confidence 33444 68999999996543211 11 122344666788999999875332 11 00113444578899
Q ss_pred CCCCeeee
Q 019580 289 PWGTVIGR 296 (339)
Q Consensus 289 p~G~ii~~ 296 (339)
|+|+++..
T Consensus 117 ~~G~i~~~ 124 (440)
T 1ems_A 117 SDGVTRAE 124 (440)
T ss_dssp TTSCEEEE
T ss_pred CCCcEEEE
Confidence 99998754
No 28
>1uf5_A N-carbamyl-D-amino acid amidohydrolase; HET: CDT; 1.60A {Agrobacterium SP} SCOP: d.160.1.2 PDB: 1uf4_A* 1uf7_A* 1uf8_A* 1erz_A 1fo6_A 2ggl_A 2ggk_A
Probab=64.58 E-value=15 Score=32.21 Aligned_cols=80 Identities=13% Similarity=0.127 Sum_probs=40.7
Q ss_pred HHHHHCCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEEEeeeeeecCCCCceEEEEEEEcCCCc
Q 019580 87 KEAASAGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLSLGGFQEKGSDDAHLCNTHVLVDDAGN 166 (339)
Q Consensus 87 ~~A~~~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~Gs~~e~~~~~~~~yNsa~li~p~G~ 166 (339)
+....+|+|+||.|=.....+......... ....+...++.-|.+++++++.-+..-.. ++...+-.+.+++|+|+
T Consensus 181 r~l~~~ga~ll~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~rA~en~~~vv~~n~~G~~-~~~~~~G~S~ii~p~G~ 256 (303)
T 1uf5_A 181 RVMGLRGAEIICGGYNTPTHNPPVPQHDHL---TSFHHLLSMQAGSYQNGAWSAAAGKAGME-ENCMLLGHSCIVAPTGE 256 (303)
T ss_dssp HHHHHTTCSEEEEEECCBSCCTTCGGGGGG---HHHHHHHHHHHHHHHHTCEEEEEEBCEEE-TTEEECCCCEEECTTSC
T ss_pred HHHHHCCCCEEEEecCCccccccccCCccc---cHHHHHHHHHhhhhcCCcEEEEECccccc-CCccccceeEEECCCCC
Confidence 344457999997654321112111100000 00012334677888999999864322111 12223334678899999
Q ss_pred eeee
Q 019580 167 IRST 170 (339)
Q Consensus 167 v~~~ 170 (339)
++..
T Consensus 257 vl~~ 260 (303)
T 1uf5_A 257 IVAL 260 (303)
T ss_dssp EEEE
T ss_pred Eecc
Confidence 8653
No 29
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=62.91 E-value=23 Score=31.16 Aligned_cols=75 Identities=9% Similarity=0.142 Sum_probs=49.4
Q ss_pred cccEEEEEEecCc------CCHHHHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHH
Q 019580 60 SSVRVAVAQMTSI------NDLAANFATSSRLVKEAASAGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLAR 133 (339)
Q Consensus 60 ~~~rVA~vQ~~~~------~d~~~n~~~~~~~i~~A~~~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~ 133 (339)
..++|..++.... ...+..++.+.+.++.|.+-|++.|++|-. ........+. ...+.+..+.+.|+
T Consensus 88 ~GL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~~~--~~~~~~~~~~-----~~~~~l~~l~~~a~ 160 (305)
T 3obe_A 88 AGLRISSSHLTPSLREYTKENMPKFDEFWKKATDIHAELGVSCMVQPSL--PRIENEDDAK-----VVSEIFNRAGEITK 160 (305)
T ss_dssp TTCEEEEEBCCCSCCCCCGGGHHHHHHHHHHHHHHHHHHTCSEEEECCC--CCCSSHHHHH-----HHHHHHHHHHHHHH
T ss_pred CCCeEEEeeccccccccchhhHHHHHHHHHHHHHHHHHcCCCEEEeCCC--CCCCCHHHHH-----HHHHHHHHHHHHHH
Confidence 3588877765531 234667888899999999999999999832 1111111111 11246778888999
Q ss_pred hcCcEEEE
Q 019580 134 ESRVWLSL 141 (339)
Q Consensus 134 ~~~i~iv~ 141 (339)
++|+.+.+
T Consensus 161 ~~Gv~l~l 168 (305)
T 3obe_A 161 KAGILWGY 168 (305)
T ss_dssp TTTCEEEE
T ss_pred HcCCEEEE
Confidence 99998754
No 30
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=55.71 E-value=56 Score=27.75 Aligned_cols=76 Identities=5% Similarity=-0.126 Sum_probs=47.8
Q ss_pred ccEEEEEEecC-------------cCCHHHHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHH
Q 019580 61 SVRVAVAQMTS-------------INDLAANFATSSRLVKEAASAGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQG 127 (339)
Q Consensus 61 ~~rVA~vQ~~~-------------~~d~~~n~~~~~~~i~~A~~~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~ 127 (339)
.+++..++... ....+..++.+.+.++.|.+-|++.|++.=.. ..+...++..+ ...+.++.
T Consensus 61 gl~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~i~~A~~lGa~~v~~~~g~-~~~~~~~~~~~----~~~~~l~~ 135 (269)
T 3ngf_A 61 NLTQVLFNMPPGDWAAGERGMAAISGREQEFRDNVDIALHYALALDCRTLHAMSGI-TEGLDRKACEE----TFIENFRY 135 (269)
T ss_dssp TCEEEEEECCCSCTTTTCCBCTTCTTCHHHHHHHHHHHHHHHHHTTCCEEECCBCB-CTTSCHHHHHH----HHHHHHHH
T ss_pred CCcEEEEecCCCccccCCCCcCCCccHHHHHHHHHHHHHHHHHHcCCCEEEEccCC-CCCCCHHHHHH----HHHHHHHH
Confidence 58888777432 12345778889999999999999988873221 11111111111 11246778
Q ss_pred HHHHHHhcCcEEEE
Q 019580 128 YCSLARESRVWLSL 141 (339)
Q Consensus 128 l~~~A~~~~i~iv~ 141 (339)
+.+.|+++|+.+.+
T Consensus 136 l~~~a~~~Gv~l~l 149 (269)
T 3ngf_A 136 AADKLAPHGITVLV 149 (269)
T ss_dssp HHHHHGGGTCEEEE
T ss_pred HHHHHHHcCCEEEE
Confidence 88889999998753
No 31
>1iuq_A Glycerol-3-phosphate acyltransferase; open twisted alpha/beta, four helix bundle; 1.55A {Cucurbita moschata} SCOP: c.112.1.1 PDB: 1k30_A
Probab=53.06 E-value=26 Score=32.10 Aligned_cols=65 Identities=15% Similarity=0.078 Sum_probs=41.2
Q ss_pred CHHHHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCC-CcchhhhhccCCchHHHHHHHHHHhcCcE--EE
Q 019580 74 DLAANFATSSRLVKEAASAGAKLLCLPENFSYVGDK-DGDSLKVAETLDGPIMQGYCSLARESRVW--LS 140 (339)
Q Consensus 74 d~~~n~~~~~~~i~~A~~~gadlIVfPE~~~~~g~~-~~~~~~~a~~~~~~~~~~l~~~A~~~~i~--iv 140 (339)
+...|++.+.+.++...+.|.-++||||..-..+-. ..++ ....+.....+.++.+|.+.++. |+
T Consensus 204 ~~r~n~ksl~~~~~~Lk~GG~sI~IFPEGTRsR~~~~~g~l--~~~~Fk~gs~~~~~~LA~ksg~P~hIv 271 (367)
T 1iuq_A 204 KRKANTRSLKEMALLLRGGSQLIWIAPSGGRDRPDPSTGEW--YPAPFDASSVDNMRRLIQHSDVPGHLF 271 (367)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCEEEECTTCSCCCBCTTTCCB--CCCCCCHHHHHHHHHHHHTSSSCEEEE
T ss_pred hhHHHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCCCCCcc--ccccccchhhhHHHHHHHHcCCCceEE
Confidence 344677777777776667789999999984211100 0110 11224455788899999999987 64
No 32
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=49.71 E-value=90 Score=26.05 Aligned_cols=78 Identities=5% Similarity=-0.074 Sum_probs=48.1
Q ss_pred cccEEEEEEecC-------------cCCHHHHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHH
Q 019580 60 SSVRVAVAQMTS-------------INDLAANFATSSRLVKEAASAGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQ 126 (339)
Q Consensus 60 ~~~rVA~vQ~~~-------------~~d~~~n~~~~~~~i~~A~~~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~ 126 (339)
..+++..++... ....+..++.+.+.++.|.+-|++.|++.=.....+....+.. ....+.++
T Consensus 52 ~gl~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~----~~~~~~l~ 127 (260)
T 1k77_A 52 NHLTLALFNTAPGDINAGEWGLSALPGREHEAHADIDLALEYALALNCEQVHVMAGVVPAGEDAERYR----AVFIDNIR 127 (260)
T ss_dssp TTCEEEEEECCCCCGGGTCSCSTTCTTCHHHHHHHHHHHHHHHHHTTCSEEECCCCBCCTTSCHHHHH----HHHHHHHH
T ss_pred cCCceEEEecCCcccccccCCCCCChhHHHHHHHHHHHHHHHHHHcCCCEEEECcCCCCCCCCHHHHH----HHHHHHHH
Confidence 358888776532 1233577888999999999999999887322111111111111 11124677
Q ss_pred HHHHHHHhcCcEEEE
Q 019580 127 GYCSLARESRVWLSL 141 (339)
Q Consensus 127 ~l~~~A~~~~i~iv~ 141 (339)
.+.+.|+++|+.+.+
T Consensus 128 ~l~~~a~~~gv~l~~ 142 (260)
T 1k77_A 128 YAADRFAPHGKRILV 142 (260)
T ss_dssp HHHHHHGGGTCEEEE
T ss_pred HHHHHHHHcCCEEEE
Confidence 788889899988753
No 33
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=43.81 E-value=39 Score=29.06 Aligned_cols=61 Identities=15% Similarity=0.043 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEEE
Q 019580 75 LAANFATSSRLVKEAASAGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLSL 141 (339)
Q Consensus 75 ~~~n~~~~~~~i~~A~~~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~ 141 (339)
.+..++.+.+.++.|.+-|++.|++.-.. .+.. ..+..+ ...+.+..+.+.|+++|+.+.+
T Consensus 97 r~~~~~~~~~~i~~a~~lG~~~v~~~~G~-~~~~-~~~~~~----~~~~~l~~l~~~a~~~Gv~l~l 157 (290)
T 3tva_A 97 RASRVAEMKEISDFASWVGCPAIGLHIGF-VPES-SSPDYS----ELVRVTQDLLTHAANHGQAVHL 157 (290)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEECCCC-CCCT-TSHHHH----HHHHHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEcCCC-Cccc-chHHHH----HHHHHHHHHHHHHHHcCCEEEE
Confidence 46678889999999999999998874221 1111 111111 1124677888889999998754
No 34
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=42.93 E-value=66 Score=27.66 Aligned_cols=77 Identities=16% Similarity=0.237 Sum_probs=46.4
Q ss_pred ccEEEEEEecC-----c--CC---HHHHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHH
Q 019580 61 SVRVAVAQMTS-----I--ND---LAANFATSSRLVKEAASAGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCS 130 (339)
Q Consensus 61 ~~rVA~vQ~~~-----~--~d---~~~n~~~~~~~i~~A~~~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~ 130 (339)
.++|..+.... . .+ .+..++.+.+.++.|.+-|++.|+++=.....+....+..+ ...+.+..+.+
T Consensus 79 gl~i~~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~----~~~~~l~~l~~ 154 (295)
T 3cqj_A 79 GVRVPSMCLSAHRRFPLGSEDDAVRAQGLEIMRKAIQFAQDVGIRVIQLAGYDVYYQEANNETRR----RFRDGLKESVE 154 (295)
T ss_dssp CCEEEEEEEGGGGTSCTTCSSHHHHHHHHHHHHHHHHHHHHHTCCEEEECCCSCSSSCCCHHHHH----HHHHHHHHHHH
T ss_pred CCeEEEEecCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCCCCcCcCHHHHHH----HHHHHHHHHHH
Confidence 57887665421 1 12 24567888899999999999999997221101111111111 11246777888
Q ss_pred HHHhcCcEEEE
Q 019580 131 LARESRVWLSL 141 (339)
Q Consensus 131 ~A~~~~i~iv~ 141 (339)
.|+++|+.+.+
T Consensus 155 ~a~~~Gv~l~l 165 (295)
T 3cqj_A 155 MASRAQVTLAM 165 (295)
T ss_dssp HHHHHTCEEEE
T ss_pred HHHHhCCEEEE
Confidence 88999988753
No 35
>3ilv_A Glutamine-dependent NAD(+) synthetase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.79A {Cytophaga hutchinsonii atcc 33406}
Probab=41.84 E-value=22 Score=35.21 Aligned_cols=72 Identities=13% Similarity=0.093 Sum_probs=41.4
Q ss_pred HHHHHCCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEEEeeeeeecCCCCceEEEEEEEcCCCc
Q 019580 87 KEAASAGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLSLGGFQEKGSDDAHLCNTHVLVDDAGN 166 (339)
Q Consensus 87 ~~A~~~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~Gs~~e~~~~~~~~yNsa~li~p~G~ 166 (339)
+....+|||+|+.|=.+.. ...+. ......++..|.+++++++.-+..-.. .++..|...-+|.|+|+
T Consensus 176 r~la~~GAdii~~psas~~---~~gk~--------~~~~~l~~~rA~e~~~~vv~aN~~G~~-~~~~~f~G~S~I~p~G~ 243 (634)
T 3ilv_A 176 IRHYEKGATLVLNPSASHF---AFGKS--------AIRYDLVIGGSERFDCTYVYANLLGNE-AGRMIYDGEVLIAHKGK 243 (634)
T ss_dssp --CGGGTCSEEEEEECCBC---CTTHH--------HHHHHHHHHHHHHTTSEEEEEECEEES-SSSCEEECCEEEEETTE
T ss_pred HHHHHCCCcEEEEecCCcc---ccCcH--------HHHHHHHHHHHHHhCCEEEEEcCccCC-CCceEEcceEEEEcCCe
Confidence 3445679999999976421 11110 124456778899999999853322211 13345544334448999
Q ss_pred eeee
Q 019580 167 IRST 170 (339)
Q Consensus 167 v~~~ 170 (339)
++..
T Consensus 244 vla~ 247 (634)
T 3ilv_A 244 LIQR 247 (634)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8764
No 36
>2j6v_A UV endonuclease, UVDE; plasmid, TIM barrel, DNA repair, DNA binding protein, lyase; HET: KCX ALY; 1.55A {Thermus thermophilus} PDB: 3bzg_A 3c0s_A* 3c0l_A 3c0q_A* 3bzj_A
Probab=41.73 E-value=27 Score=31.06 Aligned_cols=65 Identities=18% Similarity=0.114 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHHHHHCCCeEEEeC-CCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEEEe
Q 019580 76 AANFATSSRLVKEAASAGAKLLCLP-ENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLSLG 142 (339)
Q Consensus 76 ~~n~~~~~~~i~~A~~~gadlIVfP-E~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~G 142 (339)
..|++.+.+.++.+.+.|.+++=+. |.+.+.--++-.+ .. .....+..+.+.++++++++.+++-
T Consensus 57 ~~nl~~l~~~l~~~~~~gi~~~ri~s~~f~~ft~~~~~w-~~-~~~~~~~~~~~~~~~~~~gi~i~~H 122 (301)
T 2j6v_A 57 AENLRDLERILRFNADHGFALFRIGQHLIPFASHPLFPY-DW-EGAYEEELARLGALARAFGQRLSMH 122 (301)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEECCGGGSTTTTSTTCCS-CH-HHHHHHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEeccCcccccCCCcccC-Cc-CCCCHHHHHHHHHHHHHcCCeEEEe
Confidence 5799999999999999999887773 3321111111111 11 1122256788999999999977653
No 37
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=41.34 E-value=1.1e+02 Score=25.99 Aligned_cols=77 Identities=9% Similarity=0.029 Sum_probs=48.4
Q ss_pred cccEEEEEEecC----cCCHHHHHHHHHHHHHHHHHCCCeEEEe-CCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHh
Q 019580 60 SSVRVAVAQMTS----INDLAANFATSSRLVKEAASAGAKLLCL-PENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARE 134 (339)
Q Consensus 60 ~~~rVA~vQ~~~----~~d~~~n~~~~~~~i~~A~~~gadlIVf-PE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~ 134 (339)
..+++..+.+.. ..+.+..++.+.+.++.|..-|++.|++ |-.. ..+....+.. ....+.+..+.+.|++
T Consensus 60 ~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~~g~~-~~~~~~~~~~----~~~~~~l~~l~~~a~~ 134 (286)
T 3dx5_A 60 KTLEITMISDYLDISLSADFEKTIEKCEQLAILANWFKTNKIRTFAGQK-GSADFSQQER----QEYVNRIRMICELFAQ 134 (286)
T ss_dssp GTCCEEEEECCCCCSTTSCHHHHHHHHHHHHHHHHHHTCCEEEECSCSS-CGGGSCHHHH----HHHHHHHHHHHHHHHH
T ss_pred cCCeEEEEecCCCCCCchhHHHHHHHHHHHHHHHHHhCCCEEEEcCCCC-CcccCcHHHH----HHHHHHHHHHHHHHHH
Confidence 357787775542 2456778889999999999999998854 4321 1111111111 1112467788888999
Q ss_pred cCcEEEE
Q 019580 135 SRVWLSL 141 (339)
Q Consensus 135 ~~i~iv~ 141 (339)
+|+.+.+
T Consensus 135 ~Gv~l~l 141 (286)
T 3dx5_A 135 HNMYVLL 141 (286)
T ss_dssp TTCEEEE
T ss_pred hCCEEEE
Confidence 9997753
No 38
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=38.81 E-value=57 Score=28.02 Aligned_cols=81 Identities=7% Similarity=0.010 Sum_probs=45.8
Q ss_pred ccEEEEEEecCc---CCHHHHHHHHHHHHHHHHHCCCeEEEeCCCCCCC-CCCCc------ch-hhhhccCCchHHHHHH
Q 019580 61 SVRVAVAQMTSI---NDLAANFATSSRLVKEAASAGAKLLCLPENFSYV-GDKDG------DS-LKVAETLDGPIMQGYC 129 (339)
Q Consensus 61 ~~rVA~vQ~~~~---~d~~~n~~~~~~~i~~A~~~gadlIVfPE~~~~~-g~~~~------~~-~~~a~~~~~~~~~~l~ 129 (339)
.++|..+..... ...+..++.+.+.++.|..-|++.|+++...... |.... .. .+.......+.+..+.
T Consensus 68 gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~v~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 147 (301)
T 3cny_A 68 NLEIAGQWFSSYIIRDGIEKASEAFEKHCQYLKAINAPVAVVSEQTYTIQRSDTANIFKDKPYFTDKEWDEVCKGLNHYG 147 (301)
T ss_dssp TCEECEEEEEECHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECTTCCTTCSSCCTTTCCCCCCHHHHHHHHHHHHHHH
T ss_pred CCeEEEEeccCCCChhhHHHHHHHHHHHHHHHHHcCCCEEEecCCCccccCcccCCcccccccCcHHHHHHHHHHHHHHH
Confidence 477766632211 1234567888899999999999998876421001 22100 00 0101111124677888
Q ss_pred HHHHhcCcEEEE
Q 019580 130 SLARESRVWLSL 141 (339)
Q Consensus 130 ~~A~~~~i~iv~ 141 (339)
+.|+++|+.+.+
T Consensus 148 ~~a~~~gv~l~l 159 (301)
T 3cny_A 148 EIAAKYGLKVAY 159 (301)
T ss_dssp HHHHHTTCEEEE
T ss_pred HHHHHcCCEEEE
Confidence 889999987753
No 39
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=38.40 E-value=60 Score=28.75 Aligned_cols=43 Identities=19% Similarity=0.243 Sum_probs=28.7
Q ss_pred HHHCCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEEE
Q 019580 89 AASAGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLSL 141 (339)
Q Consensus 89 A~~~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~ 141 (339)
+.+++..+|++......+|...+ .+.++.+.++|+++++.+++
T Consensus 146 ~l~~~~~~v~i~~p~nptG~~~~----------~~~l~~l~~~~~~~~~~li~ 188 (377)
T 3fdb_A 146 GFQAGARSILLCNPYNPLGMVFA----------PEWLNELCDLAHRYDARVLV 188 (377)
T ss_dssp HHHTTCCEEEEESSBTTTTBCCC----------HHHHHHHHHHHHHTTCEEEE
T ss_pred HhccCCCEEEEeCCCCCCCCCCC----------HHHHHHHHHHHHHcCCEEEE
Confidence 33445777777765434454322 24678899999999998875
No 40
>1g6h_A High-affinity branched-chain amino acid transport ATP-binding protein; beta-core domain; HET: ADP; 1.60A {Methanocaldococcus jannaschii} SCOP: c.37.1.12 PDB: 1gaj_A 1g9x_A*
Probab=37.90 E-value=79 Score=27.00 Aligned_cols=71 Identities=13% Similarity=0.104 Sum_probs=44.0
Q ss_pred HHHHHHHCCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEEEeeeeeecCCCCceEEEEEEEcCC
Q 019580 85 LVKEAASAGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLSLGGFQEKGSDDAHLCNTHVLVDDA 164 (339)
Q Consensus 85 ~i~~A~~~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~Gs~~e~~~~~~~~yNsa~li~p~ 164 (339)
.+.+|...+++++++=|.+ .+...... ....+.+.+++++ +..|++-+ +... .-..+.+..+++. +
T Consensus 163 ~iAraL~~~p~lllLDEPt--s~LD~~~~--------~~l~~~l~~l~~~-g~tvi~vt-Hd~~-~~~~~~d~v~~l~-~ 228 (257)
T 1g6h_A 163 EIGRALMTNPKMIVMDEPI--AGVAPGLA--------HDIFNHVLELKAK-GITFLIIE-HRLD-IVLNYIDHLYVMF-N 228 (257)
T ss_dssp HHHHHHHTCCSEEEEESTT--TTCCHHHH--------HHHHHHHHHHHHT-TCEEEEEC-SCCS-TTGGGCSEEEEEE-T
T ss_pred HHHHHHHcCCCEEEEeCCc--cCCCHHHH--------HHHHHHHHHHHHC-CCEEEEEe-cCHH-HHHHhCCEEEEEE-C
Confidence 3446667889999999963 45543221 1356677777765 77776642 3321 2234567777777 8
Q ss_pred Cceee
Q 019580 165 GNIRS 169 (339)
Q Consensus 165 G~v~~ 169 (339)
|+++.
T Consensus 229 G~i~~ 233 (257)
T 1g6h_A 229 GQIIA 233 (257)
T ss_dssp TEEEE
T ss_pred CEEEE
Confidence 98764
No 41
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=37.25 E-value=56 Score=29.30 Aligned_cols=40 Identities=18% Similarity=0.018 Sum_probs=28.2
Q ss_pred CCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEEE
Q 019580 92 AGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLSL 141 (339)
Q Consensus 92 ~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~ 141 (339)
.++.+|+++.....+|...+ .+.++.+.++|+++++.+++
T Consensus 163 ~~~~~v~~~~~~nptG~~~~----------~~~l~~i~~~~~~~~~~li~ 202 (399)
T 1c7n_A 163 KNNKALLFCSPHNPVGRVWK----------KDELQKIKDIVLKSDLMLWS 202 (399)
T ss_dssp TTEEEEEEESSBTTTTBCCC----------HHHHHHHHHHHHHSSCEEEE
T ss_pred CCCcEEEEcCCCCCCCcCcC----------HHHHHHHHHHHHHcCCEEEE
Confidence 46788888765433454322 24688899999999998875
No 42
>1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9
Probab=35.81 E-value=1.4e+02 Score=26.21 Aligned_cols=74 Identities=9% Similarity=0.096 Sum_probs=43.8
Q ss_pred CCCceEEEecCCcceEEEeeccC--cch----H---HHHHHHhcCCceEEEEeCCCCCCCcHHHHHHHHHHHHHhcCcEE
Q 019580 195 AGKDIVAVDSPVGRLGPTVCYDL--RFP----E---LYQQLRFQHEAQVLLVPSAFTKVTGQAHWEILLRARAIETQCYV 265 (339)
Q Consensus 195 ~G~~~~vf~~~~~kigv~IC~D~--~~p----e---~~r~~~~~~gadlll~ps~~~~~~~~~~~~~~~~~rA~en~~~v 265 (339)
+|+...+++.+|.|||++--... ..| + .+..+..++++|+|++.+..... .+ ...-++....++-+
T Consensus 104 ~g~g~~I~e~~G~kIgVIgl~g~~~f~~~~~~~pf~~a~~~v~~~~~diIIv~~H~g~t--~E---k~~la~~~dg~VD~ 178 (281)
T 1t71_A 104 LGQGSLVFEFNKAKIRITNLLGTSVPLPFKTTNPFKVLKELILKRDCDLHIVDFHAETT--SE---KNAFCMAFDGYVTT 178 (281)
T ss_dssp SSBSEEEEECSSCEEEEEEEECTTSCCSSCBCCHHHHHHHHHTTCCCSEEEEEEECSCH--HH---HHHHHHHHTTTSSE
T ss_pred CCCCeEEEEECCEEEEEEEeeccccccCccccCHHHHHHHHHhhcCCCEEEEEeCCCch--HH---HHHHHHhCCCCeEE
Confidence 77788899999999998532221 111 1 22333226789999998766432 11 11222345556888
Q ss_pred EEECCccC
Q 019580 266 IAAAQAGK 273 (339)
Q Consensus 266 v~an~~G~ 273 (339)
+..+.+-.
T Consensus 179 VvGgHTHv 186 (281)
T 1t71_A 179 IFGTHTHV 186 (281)
T ss_dssp EEEESSSS
T ss_pred EEeCCCCc
Confidence 87776654
No 43
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=35.70 E-value=1.2e+02 Score=27.83 Aligned_cols=42 Identities=12% Similarity=0.239 Sum_probs=32.6
Q ss_pred cccEEEEEEecC--------cCCHHHHHHHHHHHHHHHHHCCCeEEEeCC
Q 019580 60 SSVRVAVAQMTS--------INDLAANFATSSRLVKEAASAGAKLLCLPE 101 (339)
Q Consensus 60 ~~~rVA~vQ~~~--------~~d~~~n~~~~~~~i~~A~~~gadlIVfPE 101 (339)
..++|.+++... ..+.++.++.+.+.++.|.+.|+++|++..
T Consensus 76 ~GL~i~~i~s~~~~~~i~~~~~~r~~~ie~~k~~i~~aa~lGi~~v~~nf 125 (386)
T 3bdk_A 76 AGLEITVIESIPVHEDIKQGKPNRDALIENYKTSIRNVGAAGIPVVCYNF 125 (386)
T ss_dssp TTCEEEEEECCCCCHHHHTTCTTHHHHHHHHHHHHHHHHTTTCCEEEECC
T ss_pred cCCEEEEEeccccccccccCcHHHHHHHHHHHHHHHHHHHcCCCEEEEcC
Confidence 458888876432 145678899999999999999999999743
No 44
>3gfo_A Cobalt import ATP-binding protein CBIO 1; structural genomics, cell membrane, cobalt transport, hydrolase, ION transport; 2.30A {Clostridium perfringens atcc 13124}
Probab=35.63 E-value=75 Score=27.65 Aligned_cols=74 Identities=14% Similarity=0.149 Sum_probs=44.7
Q ss_pred HHHHHHHCCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEEEeeeeeecCCCCceEEEEEEEcCC
Q 019580 85 LVKEAASAGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLSLGGFQEKGSDDAHLCNTHVLVDDA 164 (339)
Q Consensus 85 ~i~~A~~~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~Gs~~e~~~~~~~~yNsa~li~p~ 164 (339)
.+..|...+++++++=|.+ .+..+... ..+.+.+.++.++.+..|++-+ +... .-..+.+..+++. +
T Consensus 153 ~iAraL~~~P~lLlLDEPt--s~LD~~~~--------~~i~~~l~~l~~~~g~tvi~vt-Hdl~-~~~~~~drv~~l~-~ 219 (275)
T 3gfo_A 153 AIAGVLVMEPKVLILDEPT--AGLDPMGV--------SEIMKLLVEMQKELGITIIIAT-HDID-IVPLYCDNVFVMK-E 219 (275)
T ss_dssp HHHHHHTTCCSEEEEECTT--TTCCHHHH--------HHHHHHHHHHHHHHCCEEEEEE-SCCS-SGGGGCSEEEEEE-T
T ss_pred HHHHHHHcCCCEEEEECcc--ccCCHHHH--------HHHHHHHHHHHhhCCCEEEEEe-cCHH-HHHHhCCEEEEEE-C
Confidence 3445666789999999963 45443221 1366778888744477777632 2221 1224567777887 8
Q ss_pred Cceeeee
Q 019580 165 GNIRSTY 171 (339)
Q Consensus 165 G~v~~~y 171 (339)
|+++..-
T Consensus 220 G~i~~~g 226 (275)
T 3gfo_A 220 GRVILQG 226 (275)
T ss_dssp TEEEEEE
T ss_pred CEEEEEC
Confidence 9886543
No 45
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=35.21 E-value=68 Score=28.65 Aligned_cols=39 Identities=13% Similarity=0.009 Sum_probs=26.6
Q ss_pred CCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEEE
Q 019580 93 GAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLSL 141 (339)
Q Consensus 93 gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~ 141 (339)
++++|+++.....+|...+ .+.++.+.++|+++++.+++
T Consensus 162 ~~~~v~l~~p~nptG~~~~----------~~~l~~l~~~~~~~~~~li~ 200 (390)
T 1d2f_A 162 ECKIMLLCSPQNPTGKVWT----------CDELEIMADLCERHGVRVIS 200 (390)
T ss_dssp TEEEEEEESSCTTTCCCCC----------TTHHHHHHHHHHHTTCEEEE
T ss_pred CCeEEEEeCCCCCCCcCcC----------HHHHHHHHHHHHHcCCEEEE
Confidence 6788877654333443322 24678899999999998875
No 46
>2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A
Probab=34.23 E-value=1.3e+02 Score=25.81 Aligned_cols=74 Identities=15% Similarity=0.100 Sum_probs=43.5
Q ss_pred cCCCceEEEecCCcceEEEee--------ccCcchHHHHHHHhcCCceEEEEeCCCCCCCcHHHHHHHHHHHHHhcCcEE
Q 019580 194 EAGKDIVAVDSPVGRLGPTVC--------YDLRFPELYQQLRFQHEAQVLLVPSAFTKVTGQAHWEILLRARAIETQCYV 265 (339)
Q Consensus 194 ~~G~~~~vf~~~~~kigv~IC--------~D~~~pe~~r~~~~~~gadlll~ps~~~~~~~~~~~~~~~~~rA~en~~~v 265 (339)
.||+...+++.++.|||++-- +|.-|...-+.+...+ +|+|++.+.+.... + ..+-+....-++-+
T Consensus 92 ~pg~~~~i~~~~G~kIgVi~l~g~~~~~~~~~pf~~~~~~v~~lk-~d~IIv~~H~g~ts--e---k~~la~~~dg~Vd~ 165 (252)
T 2z06_A 92 TPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFRALDRLLEEEK-ADYVLVEVHAEATS--E---KMALAHYLDGRASA 165 (252)
T ss_dssp CSSCSEEEEEETTEEEEEEEEECCTTSCCCCCHHHHHHHHHHHCC-CSEEEEEEECSCHH--H---HHHHHHHHBTTBSE
T ss_pred CCCCCeEEEEECCEEEEEEEcccccCccccCCHHHHHHHHHHHhC-CCEEEEEeCCCcHH--H---HHHHHHhCCCCeEE
Confidence 367788999999999998532 2222222223333233 99999987765431 1 11222344556888
Q ss_pred EEECCccC
Q 019580 266 IAAAQAGK 273 (339)
Q Consensus 266 v~an~~G~ 273 (339)
+..+.+-.
T Consensus 166 VvGgHTHv 173 (252)
T 2z06_A 166 VLGTHTHV 173 (252)
T ss_dssp EEEESSCS
T ss_pred EEcCCCCc
Confidence 87776554
No 47
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=33.84 E-value=1.1e+02 Score=26.47 Aligned_cols=65 Identities=14% Similarity=0.000 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCcc--hhhhhccCCchHHHHHHHHHHhcCcEEEE
Q 019580 76 AANFATSSRLVKEAASAGAKLLCLPENFSYVGDKDGD--SLKVAETLDGPIMQGYCSLARESRVWLSL 141 (339)
Q Consensus 76 ~~n~~~~~~~i~~A~~~gadlIVfPE~~~~~g~~~~~--~~~~a~~~~~~~~~~l~~~A~~~~i~iv~ 141 (339)
+..++.+.+.++.|.+-|++.|+.|=.. ..|..... ..+.......+.+..+.+.|+++|+.+.+
T Consensus 103 ~~~~~~~~~~i~~A~~lG~~~v~~~~~~-~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~l 169 (309)
T 2hk0_A 103 AAGKAFFERTLSNVAKLDIHTIGGALHS-YWPIDYSQPVDKAGDYARGVEGINGIADFANDLGINLCI 169 (309)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEECTTS-CSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEeeccc-cccccCCCcCChHHHHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 4667888999999999999998865211 11221100 00111111124667788889899997753
No 48
>1vyb_A ORF2 contains A reverse transcriptase domain; endonuclease, APE-1 type, retrotransposition, retrotransposon, transferase; 1.8A {Homo sapiens} SCOP: d.151.1.1 PDB: 2v0s_A 2v0r_A
Probab=33.75 E-value=53 Score=26.80 Aligned_cols=43 Identities=14% Similarity=0.291 Sum_probs=24.5
Q ss_pred ccCcccEEEEEEecCcCCHHHHHHHHHHHHHHHHHCCCeEEEeCCCC
Q 019580 57 AGASSVRVAVAQMTSINDLAANFATSSRLVKEAASAGAKLLCLPENF 103 (339)
Q Consensus 57 ~~~~~~rVA~vQ~~~~~d~~~n~~~~~~~i~~A~~~gadlIVfPE~~ 103 (339)
+.+..|||...+.+-.... ...+.+.+.++ +.++|||++.|..
T Consensus 3 ~~~~~lri~t~Nv~g~~~~-~~~~~~~~~i~---~~~~DIv~LQE~~ 45 (238)
T 1vyb_A 3 GSNSHITILTLNINGLNSA-IKRHRLASWIK---SQDPSVCCIQETH 45 (238)
T ss_dssp CCCCCEEEEEEECSCCCSH-HHHHHHHHHHH---HHCCSEEEEECCC
T ss_pred CCCCcceEEEEecccCCch-hhHHHHHHHHH---HcCCCEEEEeccc
Confidence 3344577766665532221 12234444444 4589999999974
No 49
>4fva_A 5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosyl-DNA diesterase, hydrolase; HET: EDO; 2.07A {Caenorhabditis elegans}
Probab=33.58 E-value=32 Score=28.46 Aligned_cols=39 Identities=21% Similarity=0.275 Sum_probs=24.0
Q ss_pred ccEEEEEEecCc----CCHHHHHHHHHHHHHHHHHCCCeEEEeCCC
Q 019580 61 SVRVAVAQMTSI----NDLAANFATSSRLVKEAASAGAKLLCLPEN 102 (339)
Q Consensus 61 ~~rVA~vQ~~~~----~d~~~n~~~~~~~i~~A~~~gadlIVfPE~ 102 (339)
.+++-++..|+. .+.....+.+.++++ +.++|||+|.|.
T Consensus 11 ~~~l~v~s~Ni~g~~~~~~~~r~~~i~~~i~---~~~pDIi~LQEv 53 (256)
T 4fva_A 11 GFEVSVMSWNIDGLDGRSLLTRMKAVAHIVK---NVNPDILFLQEV 53 (256)
T ss_dssp TCEEEEEEEECCTTCCTTHHHHHHHHHHHHH---HHCCSEEEEEEE
T ss_pred CCEEEEEEEecCCCCCcCHHHHHHHHHHHHH---HcCCCEEEEEec
Confidence 355555556653 234444555555554 458999999996
No 50
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=33.22 E-value=1e+02 Score=27.97 Aligned_cols=53 Identities=9% Similarity=0.107 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHH----CCCeEE-EeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEEE
Q 019580 79 FATSSRLVKEAAS----AGAKLL-CLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLSL 141 (339)
Q Consensus 79 ~~~~~~~i~~A~~----~gadlI-VfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~ 141 (339)
++.+++.++...+ .++++| ++|.....+|...+ .+.++.+.++|+++++.+++
T Consensus 169 ~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~~~----------~~~l~~l~~~~~~~~~~li~ 226 (425)
T 1vp4_A 169 LNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTS----------LEKRKALVEIAEKYDLFIVE 226 (425)
T ss_dssp HHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCC----------HHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHhhhhcccCCCceEEEECCCCCCCCCCcCC----------HHHHHHHHHHHHHcCCEEEE
Confidence 4445555544322 257787 57775444554332 24678899999999999875
No 51
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=33.16 E-value=79 Score=28.28 Aligned_cols=39 Identities=13% Similarity=0.072 Sum_probs=25.7
Q ss_pred CCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEEE
Q 019580 93 GAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLSL 141 (339)
Q Consensus 93 gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~ 141 (339)
++.+|++......+|...+ .+.++.+.++|+++++.+++
T Consensus 179 ~~~~v~~~~p~nptG~~~~----------~~~l~~i~~~~~~~~~~li~ 217 (407)
T 3nra_A 179 GARVFLFSNPNNPAGVVYS----------AEEIGQIAALAARYGATVIA 217 (407)
T ss_dssp TCCEEEEESSCTTTCCCCC----------HHHHHHHHHHHHHHTCEEEE
T ss_pred CCcEEEEcCCCCCCCcccC----------HHHHHHHHHHHHHcCCEEEE
Confidence 5666665443333454332 24678899999999999875
No 52
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=32.66 E-value=74 Score=28.26 Aligned_cols=41 Identities=10% Similarity=0.122 Sum_probs=27.5
Q ss_pred CCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEEEe
Q 019580 92 AGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLSLG 142 (339)
Q Consensus 92 ~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~G 142 (339)
.++++|+++.....+|...+ .+.++.+.++|+++++.+++=
T Consensus 159 ~~~~~v~i~~p~nptG~~~~----------~~~l~~i~~~~~~~~~~li~D 199 (391)
T 3dzz_A 159 PSVRMMVFCNPHNPIGYAWS----------EEEVKRIAELCAKHQVLLISD 199 (391)
T ss_dssp TTEEEEEEESSBTTTTBCCC----------HHHHHHHHHHHHHTTCEEEEE
T ss_pred cCceEEEEECCCCCCCcccC----------HHHHHHHHHHHHHCCCEEEEe
Confidence 46788777554333443322 245788999999999988753
No 53
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=32.31 E-value=69 Score=28.39 Aligned_cols=42 Identities=12% Similarity=0.245 Sum_probs=27.1
Q ss_pred HCCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEEEe
Q 019580 91 SAGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLSLG 142 (339)
Q Consensus 91 ~~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~G 142 (339)
..++.+|++.-....+|...+ .+.++.+.++|+++++.++.=
T Consensus 152 ~~~~~~v~~~~~~nptG~~~~----------~~~l~~i~~la~~~~~~li~D 193 (375)
T 3op7_A 152 RPTTKMICINNANNPTGAVMD----------RTYLEELVEIASEVGAYILSD 193 (375)
T ss_dssp CTTCCEEEEESSCTTTCCCCC----------HHHHHHHHHHHHTTTCEEEEE
T ss_pred ccCCeEEEEcCCCCCCCCCCC----------HHHHHHHHHHHHHcCCEEEEE
Confidence 346777765432223444332 246889999999999999853
No 54
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=32.29 E-value=94 Score=26.11 Aligned_cols=78 Identities=9% Similarity=0.032 Sum_probs=46.2
Q ss_pred cccEEEEEEecC--c-CCH---HHHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHH
Q 019580 60 SSVRVAVAQMTS--I-NDL---AANFATSSRLVKEAASAGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLAR 133 (339)
Q Consensus 60 ~~~rVA~vQ~~~--~-~d~---~~n~~~~~~~i~~A~~~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~ 133 (339)
..+++..++... . .+. +..++.+.+.++.|..-|++.|++.-.....+...++..+ ...+.+..+.+.|+
T Consensus 58 ~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~----~~~~~l~~l~~~a~ 133 (278)
T 1i60_A 58 HHIKPLALNALVFFNNRDEKGHNEIITEFKGMMETCKTLGVKYVVAVPLVTEQKIVKEEIKK----SSVDVLTELSDIAE 133 (278)
T ss_dssp SSCEEEEEEEEECCSSCCHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCBCSSCCCHHHHHH----HHHHHHHHHHHHHG
T ss_pred cCCCeeeeccccccccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCHHHHHH----HHHHHHHHHHHHHH
Confidence 357877666542 1 233 4567888899999999999988772111111111111111 11246677888888
Q ss_pred hcCcEEEE
Q 019580 134 ESRVWLSL 141 (339)
Q Consensus 134 ~~~i~iv~ 141 (339)
++|+.+.+
T Consensus 134 ~~gv~l~l 141 (278)
T 1i60_A 134 PYGVKIAL 141 (278)
T ss_dssp GGTCEEEE
T ss_pred hcCCEEEE
Confidence 99997753
No 55
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=31.83 E-value=97 Score=26.94 Aligned_cols=74 Identities=11% Similarity=0.104 Sum_probs=48.8
Q ss_pred cccEEEEEEecCc----C-------------CHHHHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCcchhhhhccCCc
Q 019580 60 SSVRVAVAQMTSI----N-------------DLAANFATSSRLVKEAASAGAKLLCLPENFSYVGDKDGDSLKVAETLDG 122 (339)
Q Consensus 60 ~~~rVA~vQ~~~~----~-------------d~~~n~~~~~~~i~~A~~~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~ 122 (339)
..+++..++.... . ..+..++.+.+.++.|.+-|++.|++|-.. .. ...+.+ ....
T Consensus 71 ~GL~v~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~~~~--~~-~~~~~~----~~~~ 143 (303)
T 3l23_A 71 AGLKIISSHVNPVDTSISDPFKAMIFKYSKEVTPKIMEYWKATAADHAKLGCKYLIQPMMP--TI-TTHDEA----KLVC 143 (303)
T ss_dssp TTCEEEEEECCCBCTTCSSTTTTBCCSCCTTTHHHHHHHHHHHHHHHHHTTCSEEEECSCC--CC-CSHHHH----HHHH
T ss_pred cCCeEEEEecccccccccCcccccccccchhhHHHHHHHHHHHHHHHHHcCCCEEEECCCC--CC-CCHHHH----HHHH
Confidence 3588888776531 1 136678889999999999999999998421 11 111111 1112
Q ss_pred hHHHHHHHHHHhcCcE--EE
Q 019580 123 PIMQGYCSLARESRVW--LS 140 (339)
Q Consensus 123 ~~~~~l~~~A~~~~i~--iv 140 (339)
+.+..+.+.|+++|+. +.
T Consensus 144 ~~l~~l~~~a~~~Gv~~~l~ 163 (303)
T 3l23_A 144 DIFNQASDVIKAEGIATGFG 163 (303)
T ss_dssp HHHHHHHHHHHHTTCTTCEE
T ss_pred HHHHHHHHHHHHCCCcceEE
Confidence 4678888999999998 64
No 56
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=31.61 E-value=74 Score=28.16 Aligned_cols=42 Identities=19% Similarity=0.152 Sum_probs=27.5
Q ss_pred HCCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEEEe
Q 019580 91 SAGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLSLG 142 (339)
Q Consensus 91 ~~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~G 142 (339)
..++++|+++.....+|... +.+.++.+.++|+++++.+++=
T Consensus 154 ~~~~~~v~i~~p~nptG~~~----------~~~~l~~l~~~~~~~~~~li~D 195 (383)
T 3kax_A 154 QQGVKLMLLCSPHNPIGRVW----------KKEELTKLGSLCTKYNVIVVAD 195 (383)
T ss_dssp TTTCCEEEEESSBTTTTBCC----------CHHHHHHHHHHHHHHTCEEEEE
T ss_pred CcCCeEEEEeCCCCCCCcCc----------CHHHHHHHHHHHHHCCCEEEEE
Confidence 45677777755433344332 2246788999999999998753
No 57
>4f1h_A Tyrosyl-DNA phosphodiesterase 2; hydrolase-DNA complex; HET: DNA; 1.66A {Danio rerio} PDB: 4fpv_A* 4f1h_B*
Probab=31.53 E-value=50 Score=26.64 Aligned_cols=40 Identities=13% Similarity=0.056 Sum_probs=25.7
Q ss_pred cccEEEEEEecC--cCCHHHHHHHHHHHHHHHHHCCCeEEEeCCC
Q 019580 60 SSVRVAVAQMTS--INDLAANFATSSRLVKEAASAGAKLLCLPEN 102 (339)
Q Consensus 60 ~~~rVA~vQ~~~--~~d~~~n~~~~~~~i~~A~~~gadlIVfPE~ 102 (339)
.+|||.-.+.+- ..+....++.+.+++++ .++|||++-|.
T Consensus 2 ~~l~v~t~Ni~g~~~~~~~~r~~~i~~~i~~---~~pDIi~LQEv 43 (250)
T 4f1h_A 2 SKLSIISWNVDGLDTLNLADRARGLCSYLAL---YTPDVVFLQEL 43 (250)
T ss_dssp CCEEEEEEECCTTCCTTHHHHHHHHHHHHHH---HCCSEEEEEEE
T ss_pred CeEEEEEEEeCCCCCcCHHHHHHHHHHHHHH---cCCCEEEEEeC
Confidence 357777766552 13445555555555543 58999999995
No 58
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=30.79 E-value=36 Score=29.89 Aligned_cols=65 Identities=8% Similarity=0.028 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHHHCCCeEEEeCCCCCCCC-CCCcchhhhhccCCchHHHHHHHHHHhcCcE-EE
Q 019580 76 AANFATSSRLVKEAASAGAKLLCLPENFSYVG-DKDGDSLKVAETLDGPIMQGYCSLARESRVW-LS 140 (339)
Q Consensus 76 ~~n~~~~~~~i~~A~~~gadlIVfPE~~~~~g-~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~-iv 140 (339)
+..++.+.+.++.|.+-|++.|+.|=.....+ +......+.......+.+..+.+.|+++|+. +.
T Consensus 110 ~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~~l~ 176 (316)
T 3qxb_A 110 SLGYQHLKRAIDMTAAMEVPATGMPFGSYSAADALNPARREEIYAIARDMWIELAAYAKRQGLSMLY 176 (316)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEECCBBCCHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEecCCCcCccccCCcccHHHHHHHHHHHHHHHHHHHHhcCCeEEE
Confidence 45677888999999999999999764320001 1111111111111234677788888899987 54
No 59
>3tui_C Methionine import ATP-binding protein METN; ABC-transporter, type I ABC type importer, methionine uptake transporter, membrane protein; HET: ADP; 2.90A {Escherichia coli} PDB: 3tuj_C 3tuz_C* 3dhw_C
Probab=30.60 E-value=39 Score=31.01 Aligned_cols=73 Identities=12% Similarity=0.155 Sum_probs=46.3
Q ss_pred HHHHHHCCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEEEeeeeeecCCCCceEEEEEEEcCCC
Q 019580 86 VKEAASAGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLSLGGFQEKGSDDAHLCNTHVLVDDAG 165 (339)
Q Consensus 86 i~~A~~~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~Gs~~e~~~~~~~~yNsa~li~p~G 165 (339)
+.+|...+++++++=|.+ .+..+... ..+++.|+++.++.++.|++- .+... .-..+.+..+++. +|
T Consensus 174 IArAL~~~P~lLLlDEPT--s~LD~~~~--------~~i~~lL~~l~~~~g~Tii~v-THdl~-~~~~~aDrv~vl~-~G 240 (366)
T 3tui_C 174 IARALASNPKVLLCDQAT--SALDPATT--------RSILELLKDINRRLGLTILLI-THEMD-VVKRICDCVAVIS-NG 240 (366)
T ss_dssp HHHHTTTCCSEEEEESTT--TTSCHHHH--------HHHHHHHHHHHHHSCCEEEEE-ESCHH-HHHHHCSEEEEEE-TT
T ss_pred HHHHHhcCCCEEEEECCC--ccCCHHHH--------HHHHHHHHHHHHhCCCEEEEE-ecCHH-HHHHhCCEEEEEE-CC
Confidence 445556789999999963 45443221 246778888888889888864 23221 1123456777887 89
Q ss_pred ceeeee
Q 019580 166 NIRSTY 171 (339)
Q Consensus 166 ~v~~~y 171 (339)
+++..-
T Consensus 241 ~iv~~g 246 (366)
T 3tui_C 241 ELIEQD 246 (366)
T ss_dssp EEEECC
T ss_pred EEEEEc
Confidence 886543
No 60
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=30.39 E-value=1.2e+02 Score=27.44 Aligned_cols=53 Identities=13% Similarity=0.084 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHH--CCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEEE
Q 019580 79 FATSSRLVKEAAS--AGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLSL 141 (339)
Q Consensus 79 ~~~~~~~i~~A~~--~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~ 141 (339)
++.+++.++.... .++.+|+++.....+|...+ .+.++.+.++|+++++.+++
T Consensus 172 ~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~----------~~~l~~l~~~~~~~~~~li~ 226 (428)
T 1iay_A 172 SKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLD----------KDTLKSVLSFTNQHNIHLVC 226 (428)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCC----------HHHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCC----------HHHHHHHHHHHHHCCeEEEE
Confidence 4455555544322 25777777665434554432 24678899999999998875
No 61
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=30.19 E-value=1.8e+02 Score=24.20 Aligned_cols=73 Identities=15% Similarity=0.131 Sum_probs=45.0
Q ss_pred cccEEEEEEecC-c-CCHHHHHHHHHHHHHHHHHCCCeEEEe-CCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcC
Q 019580 60 SSVRVAVAQMTS-I-NDLAANFATSSRLVKEAASAGAKLLCL-PENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESR 136 (339)
Q Consensus 60 ~~~rVA~vQ~~~-~-~d~~~n~~~~~~~i~~A~~~gadlIVf-PE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~ 136 (339)
..++|..++... . ...++..+.+.+.++.|.+-|++.|++ |-.. +. ..+... ..+.++.+.+.|+++|
T Consensus 63 ~gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~v~~~~g~~---~~--~~~~~~----~~~~l~~l~~~a~~~g 133 (272)
T 2q02_A 63 YGLEIVTINAVYPFNQLTEEVVKKTEGLLRDAQGVGARALVLCPLND---GT--IVPPEV----TVEAIKRLSDLFARYD 133 (272)
T ss_dssp TTCEEEEEEEETTTTSCCHHHHHHHHHHHHHHHHHTCSEEEECCCCS---SB--CCCHHH----HHHHHHHHHHHHHTTT
T ss_pred cCCeEEechhhhccCCcHHHHHHHHHHHHHHHHHhCCCEEEEccCCC---ch--hHHHHH----HHHHHHHHHHHHHHcC
Confidence 358887666532 1 112456678889999999999998875 4321 11 111111 0246677888899999
Q ss_pred cEEEE
Q 019580 137 VWLSL 141 (339)
Q Consensus 137 i~iv~ 141 (339)
+.+.+
T Consensus 134 v~l~~ 138 (272)
T 2q02_A 134 IQGLV 138 (272)
T ss_dssp CEEEE
T ss_pred CEEEE
Confidence 87753
No 62
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=29.99 E-value=41 Score=25.50 Aligned_cols=42 Identities=7% Similarity=-0.100 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEE
Q 019580 79 FATSSRLVKEAASAGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLS 140 (339)
Q Consensus 79 ~~~~~~~i~~A~~~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv 140 (339)
-+...+.++++.+.|+..|+|-.. +. .+.+.+.|+++|+.++
T Consensus 68 ~~~v~~~v~e~~~~g~k~v~~~~G-----~~---------------~~e~~~~a~~~Girvv 109 (122)
T 3ff4_A 68 PQNQLSEYNYILSLKPKRVIFNPG-----TE---------------NEELEEILSENGIEPV 109 (122)
T ss_dssp HHHHGGGHHHHHHHCCSEEEECTT-----CC---------------CHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHhcCCCEEEECCC-----CC---------------hHHHHHHHHHcCCeEE
Confidence 345566677777778887666433 22 1468999999999987
No 63
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=29.44 E-value=1.3e+02 Score=26.98 Aligned_cols=53 Identities=13% Similarity=0.109 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHC--CCeEE-EeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEEE
Q 019580 79 FATSSRLVKEAASA--GAKLL-CLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLSL 141 (339)
Q Consensus 79 ~~~~~~~i~~A~~~--gadlI-VfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~ 141 (339)
++.+++.++.+..+ ++++| ++|-....+|...+ .+.++.+.++|+++++.+++
T Consensus 158 ~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~----------~~~l~~i~~~~~~~~~~li~ 213 (407)
T 2zc0_A 158 VDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMS----------MERRKALLEIASKYDLLIIE 213 (407)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCC----------HHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHhhhcccCCceEEEECCCCCCCCCcCCC----------HHHHHHHHHHHHHcCCEEEE
Confidence 34444444433224 57776 45543333454332 24677899999999998875
No 64
>3tif_A Uncharacterized ABC transporter ATP-binding prote; nucleotide-binding domain, ABC transporter ATPase; HET: ADP; 1.80A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 1l2t_A* 1f3o_A*
Probab=29.39 E-value=60 Score=27.41 Aligned_cols=73 Identities=11% Similarity=0.074 Sum_probs=44.9
Q ss_pred HHHHHHHCCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEEEeeeeeecCCCCceEEEEEEEcCC
Q 019580 85 LVKEAASAGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLSLGGFQEKGSDDAHLCNTHVLVDDA 164 (339)
Q Consensus 85 ~i~~A~~~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~Gs~~e~~~~~~~~yNsa~li~p~ 164 (339)
.+.+|...+++++++=|.+ .+..+... ..+.+.+.+++++.+..|++-+ +... . -.+.+..+++. +
T Consensus 155 ~iAral~~~p~llllDEPt--s~LD~~~~--------~~i~~~l~~l~~~~g~tvi~vt-Hd~~-~-~~~~d~i~~l~-~ 220 (235)
T 3tif_A 155 AIARALANNPPIILADQPT--WALDSKTG--------EKIMQLLKKLNEEDGKTVVVVT-HDIN-V-ARFGERIIYLK-D 220 (235)
T ss_dssp HHHHHHTTCCSEEEEESTT--TTSCHHHH--------HHHHHHHHHHHHHHCCEEEEEC-SCHH-H-HTTSSEEEEEE-T
T ss_pred HHHHHHHcCCCEEEEeCCc--ccCCHHHH--------HHHHHHHHHHHHHcCCEEEEEc-CCHH-H-HHhCCEEEEEE-C
Confidence 3445666789999999963 45443221 1366778888877677777642 3321 1 13456677777 8
Q ss_pred Cceeeee
Q 019580 165 GNIRSTY 171 (339)
Q Consensus 165 G~v~~~y 171 (339)
|+++...
T Consensus 221 G~i~~~~ 227 (235)
T 3tif_A 221 GEVEREE 227 (235)
T ss_dssp TEEEEEE
T ss_pred CEEEEEc
Confidence 9886543
No 65
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=28.76 E-value=1.6e+02 Score=24.96 Aligned_cols=78 Identities=10% Similarity=0.086 Sum_probs=47.7
Q ss_pred cccEEEEEEecCc-----CCH---HHHHHHHHHHHHHHHHCCCeEEEeCCCCC-CC-CC-CCcchhhhhccCCchHHHHH
Q 019580 60 SSVRVAVAQMTSI-----NDL---AANFATSSRLVKEAASAGAKLLCLPENFS-YV-GD-KDGDSLKVAETLDGPIMQGY 128 (339)
Q Consensus 60 ~~~rVA~vQ~~~~-----~d~---~~n~~~~~~~i~~A~~~gadlIVfPE~~~-~~-g~-~~~~~~~~a~~~~~~~~~~l 128 (339)
..|+|..+..... .+. +..++.+.+.++.|..-|++.|+++=.+. .. .. ..++..+ ...+.+..+
T Consensus 76 ~gl~v~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lGa~~v~~~~g~~~~~~~~p~~~~~~~----~~~~~l~~l 151 (287)
T 3kws_A 76 RNIKVSAICAGFKGFILSTDPAIRKECMDTMKEIIAAAGELGSTGVIIVPAFNGQVPALPHTMETRD----FLCEQFNEM 151 (287)
T ss_dssp SSCEECEEECCCCSCTTBSSHHHHHHHHHHHHHHHHHHHHTTCSEEEECSCCTTCCSBCCSSHHHHH----HHHHHHHHH
T ss_pred cCCeEEEEecCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcCCcCCCCCCHHHHHH----HHHHHHHHH
Confidence 4688876665421 232 46778888999999999999888753321 11 00 1111111 112467788
Q ss_pred HHHHHhcCcEEEE
Q 019580 129 CSLARESRVWLSL 141 (339)
Q Consensus 129 ~~~A~~~~i~iv~ 141 (339)
.+.|+++|+.+.+
T Consensus 152 ~~~a~~~Gv~l~l 164 (287)
T 3kws_A 152 GTFAAQHGTSVIF 164 (287)
T ss_dssp HHHHHHTTCCEEE
T ss_pred HHHHHHcCCEEEE
Confidence 8889999987753
No 66
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=28.64 E-value=69 Score=27.00 Aligned_cols=78 Identities=21% Similarity=0.121 Sum_probs=46.1
Q ss_pred ccEEEEEEec--Cc-CC---HHHHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHh
Q 019580 61 SVRVAVAQMT--SI-ND---LAANFATSSRLVKEAASAGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARE 134 (339)
Q Consensus 61 ~~rVA~vQ~~--~~-~d---~~~n~~~~~~~i~~A~~~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~ 134 (339)
.++|..+... .. .+ .+..++.+.+.++.|..-|++.|+++=.. .+...... +.......+.++.+.+.|++
T Consensus 58 gl~~~~~~~~~~~~~~d~~~r~~~~~~~~~~i~~a~~lG~~~v~~~~g~-~~~~~~~~--~~~~~~~~~~l~~l~~~a~~ 134 (275)
T 3qc0_A 58 GLKLTGLCRGGFFPAPDASGREKAIDDNRRAVDEAAELGADCLVLVAGG-LPGGSKNI--DAARRMVVEGIAAVLPHARA 134 (275)
T ss_dssp TCEESCEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHTTCSCEEEECBC-CCTTCCCH--HHHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEeecCCCcCCCCHHHHHHHHHHHHHHHHHHHHhCCCEEEEeeCC-CCCCCcCH--HHHHHHHHHHHHHHHHHHHH
Confidence 4777666543 21 23 34567888899999999999988776332 11110110 00111112467788888989
Q ss_pred cCcEEEE
Q 019580 135 SRVWLSL 141 (339)
Q Consensus 135 ~~i~iv~ 141 (339)
+|+.+.+
T Consensus 135 ~gv~l~l 141 (275)
T 3qc0_A 135 AGVPLAI 141 (275)
T ss_dssp HTCCEEE
T ss_pred cCCEEEE
Confidence 9987754
No 67
>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=28.64 E-value=1.7e+02 Score=21.19 Aligned_cols=48 Identities=13% Similarity=0.054 Sum_probs=31.6
Q ss_pred hHHHHHHHHHHhcCcEEEEeeeeeecCCCCceEEEEEEEcCCCceeeee
Q 019580 123 PIMQGYCSLARESRVWLSLGGFQEKGSDDAHLCNTHVLVDDAGNIRSTY 171 (339)
Q Consensus 123 ~~~~~l~~~A~~~~i~iv~Gs~~e~~~~~~~~yNsa~li~p~G~v~~~y 171 (339)
+-++.+.+.+++.|+.++.+. ............+.++.||+|..+..+
T Consensus 79 ~d~~~~~~~l~~~G~~~~~~p-~~~~~~~~~~~~~~~~~DPdGn~iel~ 126 (135)
T 3rri_A 79 KHFDNLYKLAKQRGIPFYHDL-SRRFEGLIEEHETFFLIDPSNNLLEFK 126 (135)
T ss_dssp HHHHHHHHHHHHTTCCEEEEE-EEESTTSTTCEEEEEEECTTCCEEEEE
T ss_pred HhHHHHHHHHHHcCCceecCc-ccccCCCCCceEEEEEECCCCCEEEEE
Confidence 567778888888899887763 332111122345788999999886544
No 68
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=28.41 E-value=1.1e+02 Score=23.72 Aligned_cols=70 Identities=9% Similarity=0.019 Sum_probs=43.0
Q ss_pred cEEEEEEecC-----cCCHHHHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcC
Q 019580 62 VRVAVAQMTS-----INDLAANFATSSRLVKEAASAGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESR 136 (339)
Q Consensus 62 ~rVA~vQ~~~-----~~d~~~n~~~~~~~i~~A~~~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~ 136 (339)
..+.+++... ..+.+...+.+.++++.+.+.++.+|+.-=.. .+.+. .+. ....-+.++++|++++
T Consensus 67 pd~vvi~~G~ND~~~~~~~~~~~~~~~~~i~~~~~~~~~vvl~~~~~-p~~~~-~~~-------~~~~~~~~~~~a~~~~ 137 (185)
T 3hp4_A 67 PTHVLIELGANDGLRGFPVKKMQTNLTALVKKSQAANAMTALMEIYI-PPNYG-PRY-------SKMFTSSFTQISEDTN 137 (185)
T ss_dssp CSEEEEECCHHHHHTTCCHHHHHHHHHHHHHHHHHTTCEEEEECCCC-CSTTC-HHH-------HHHHHHHHHHHHHHHC
T ss_pred CCEEEEEeecccCCCCcCHHHHHHHHHHHHHHHHHcCCeEEEEeCCC-CCccc-HHH-------HHHHHHHHHHHHHHcC
Confidence 4677777652 13556666777777777777899987763111 11111 111 1246677899999999
Q ss_pred cEEE
Q 019580 137 VWLS 140 (339)
Q Consensus 137 i~iv 140 (339)
+.++
T Consensus 138 ~~~v 141 (185)
T 3hp4_A 138 AHLM 141 (185)
T ss_dssp CEEE
T ss_pred CEEE
Confidence 8775
No 69
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=28.30 E-value=1.2e+02 Score=24.55 Aligned_cols=76 Identities=8% Similarity=0.001 Sum_probs=40.2
Q ss_pred EEEEEEecC--------cCCHHHHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCC-CcchhhhhccCCchHHHHHHHHHH
Q 019580 63 RVAVAQMTS--------INDLAANFATSSRLVKEAASAGAKLLCLPENFSYVGDK-DGDSLKVAETLDGPIMQGYCSLAR 133 (339)
Q Consensus 63 rVA~vQ~~~--------~~d~~~n~~~~~~~i~~A~~~gadlIVfPE~~~~~g~~-~~~~~~~a~~~~~~~~~~l~~~A~ 133 (339)
++.+++... ..+.+...+.+.++++.+.+.++.+++..=. +...+. ...... ......++-+.++++|+
T Consensus 80 d~vvi~~G~ND~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~iil~~~~-P~~~~~~~~~~~~-~~~~i~~~n~~i~~~a~ 157 (209)
T 4hf7_A 80 ALVVINAGTNDVAENTGAYNEDYTFGNIASMAELAKANKIKVILTSVL-PAAEFPWRREIKD-APQKIQSLNARIEAYAK 157 (209)
T ss_dssp SEEEECCCHHHHTTSSSSCCHHHHHHHHHHHHHHHHHTTCEEEEECCC-CCSCCTTCTTCCC-HHHHHHHHHHHHHHHHH
T ss_pred CEEEEEeCCCcCccccccccHHHHHHHHHHhhHHHhccCceEEEEeee-ccCcccccccccc-hhHHHHHHHHHHHHHHH
Confidence 566666542 1345566667777777777789998875211 111000 000000 00001134567889999
Q ss_pred hcCcEEE
Q 019580 134 ESRVWLS 140 (339)
Q Consensus 134 ~~~i~iv 140 (339)
++++.++
T Consensus 158 ~~~v~~i 164 (209)
T 4hf7_A 158 ANKIPFV 164 (209)
T ss_dssp HTTCCEE
T ss_pred hcCCeEe
Confidence 9988664
No 70
>2yz2_A Putative ABC transporter ATP-binding protein TM_0; cobalt transport, TM02 hydrolase, inner membrane, membrane, nucleotide-binding; 2.30A {Thermotoga maritima}
Probab=27.75 E-value=1.3e+02 Score=25.79 Aligned_cols=71 Identities=11% Similarity=0.055 Sum_probs=43.5
Q ss_pred HHHHHHHCCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEEEeeeeeecCCCCceEEEEEEEcCC
Q 019580 85 LVKEAASAGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLSLGGFQEKGSDDAHLCNTHVLVDDA 164 (339)
Q Consensus 85 ~i~~A~~~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~Gs~~e~~~~~~~~yNsa~li~p~ 164 (339)
.+..|...+++++++=|.+ .+...... ....+.+.+++++ +..|++-+ +... .-..+.+..++++ +
T Consensus 148 ~lAraL~~~p~lllLDEPt--s~LD~~~~--------~~l~~~l~~l~~~-g~tii~vt-Hd~~-~~~~~~d~v~~l~-~ 213 (266)
T 2yz2_A 148 AIASVIVHEPDILILDEPL--VGLDREGK--------TDLLRIVEKWKTL-GKTVILIS-HDIE-TVINHVDRVVVLE-K 213 (266)
T ss_dssp HHHHHHTTCCSEEEEESTT--TTCCHHHH--------HHHHHHHHHHHHT-TCEEEEEC-SCCT-TTGGGCSEEEEEE-T
T ss_pred HHHHHHHcCCCEEEEcCcc--ccCCHHHH--------HHHHHHHHHHHHc-CCEEEEEe-CCHH-HHHHhCCEEEEEE-C
Confidence 3446667789999999964 45443221 1356677777766 77776542 3321 2224566777776 8
Q ss_pred Cceee
Q 019580 165 GNIRS 169 (339)
Q Consensus 165 G~v~~ 169 (339)
|+++.
T Consensus 214 G~i~~ 218 (266)
T 2yz2_A 214 GKKVF 218 (266)
T ss_dssp TEEEE
T ss_pred CEEEE
Confidence 88754
No 71
>2ihy_A ABC transporter, ATP-binding protein; ATPase, ABC cassette, hydrolase; HET: MSE; 1.90A {Staphylococcus aureus}
Probab=27.46 E-value=97 Score=26.91 Aligned_cols=72 Identities=14% Similarity=0.015 Sum_probs=42.7
Q ss_pred HHHHHHHCCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEE--EEeeeeeecCCCCceEEEEEEEc
Q 019580 85 LVKEAASAGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWL--SLGGFQEKGSDDAHLCNTHVLVD 162 (339)
Q Consensus 85 ~i~~A~~~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~i--v~Gs~~e~~~~~~~~yNsa~li~ 162 (339)
.+.+|...+++++++=|.+ .+...... ..+.+.|.+++++ +..| ++- .+... .-..+.+..+++.
T Consensus 171 ~lAraL~~~p~lLlLDEPt--s~LD~~~~--------~~l~~~l~~l~~~-g~tv~~iiv-tHd~~-~~~~~~d~v~~l~ 237 (279)
T 2ihy_A 171 MIARALMGQPQVLILDEPA--AGLDFIAR--------ESLLSILDSLSDS-YPTLAMIYV-THFIE-EITANFSKILLLK 237 (279)
T ss_dssp HHHHHHHTCCSEEEEESTT--TTCCHHHH--------HHHHHHHHHHHHH-CTTCEEEEE-ESCGG-GCCTTCCEEEEEE
T ss_pred HHHHHHhCCCCEEEEeCCc--cccCHHHH--------HHHHHHHHHHHHC-CCEEEEEEE-ecCHH-HHHHhCCEEEEEE
Confidence 3456667889999999963 45543221 1356667777766 5444 442 22221 2234567777886
Q ss_pred CCCceeee
Q 019580 163 DAGNIRST 170 (339)
Q Consensus 163 p~G~v~~~ 170 (339)
+|+++..
T Consensus 238 -~G~i~~~ 244 (279)
T 2ihy_A 238 -DGQSIQQ 244 (279)
T ss_dssp -TTEEEEE
T ss_pred -CCEEEEE
Confidence 8987643
No 72
>2him_A L-asparaginase 1; hydrolase; 1.82A {Escherichia coli} PDB: 2p2d_A 2p2n_A 3ntx_A* 2ocd_A
Probab=27.44 E-value=2.3e+02 Score=25.73 Aligned_cols=66 Identities=12% Similarity=0.050 Sum_probs=46.9
Q ss_pred CcceEEEeeccCcchHHHHHHHhcCCceEEEEeCCC-CCCCcHHHHHHHHHHHHHhcCcEEEEECCccC
Q 019580 206 VGRLGPTVCYDLRFPELYQQLRFQHEAQVLLVPSAF-TKVTGQAHWEILLRARAIETQCYVIAAAQAGK 273 (339)
Q Consensus 206 ~~kigv~IC~D~~~pe~~r~~~~~~gadlll~ps~~-~~~~~~~~~~~~~~~rA~en~~~vv~an~~G~ 273 (339)
..++.++-+|=-.-+++.+.+. ..|++-|+.-+.. +... ...+..-...+|.+.|++|+.++++..
T Consensus 229 ~~~V~il~~~pG~~~~~l~a~~-~~g~~GiVle~~G~Gn~p-~~~~~~~~l~~a~~~Gi~VV~~Src~~ 295 (358)
T 2him_A 229 PQPIGVVTIYPGISADVVRNFL-RQPVKALILRSYGVGNAP-QNKAFLQELQEASDRGIVVVNLTQCMS 295 (358)
T ss_dssp CCCEEEEECCTTCCHHHHHHHT-SSSCSEEEEEEBTTTBCC-CCHHHHHHHHHHHHTTCEEEEEESSSB
T ss_pred CCcEEEEEeCCCCCHHHHHHHH-hCCCCEEEEecCCCCCCC-CcHHHHHHHHHHHHCCCEEEEEcCCCC
Confidence 4689999999888899998887 7889888775432 2222 112222345678899999999999754
No 73
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=27.24 E-value=91 Score=27.73 Aligned_cols=40 Identities=8% Similarity=0.010 Sum_probs=25.9
Q ss_pred CCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEEE
Q 019580 92 AGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLSL 141 (339)
Q Consensus 92 ~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~ 141 (339)
.++.+|+++-....+|...+ .+.++.+.++|+++++.+++
T Consensus 159 ~~~~~v~~~~~~nptG~~~~----------~~~l~~l~~~~~~~~~~li~ 198 (389)
T 1gd9_A 159 DKTRALIINSPCNPTGAVLT----------KKDLEEIADFVVEHDLIVIS 198 (389)
T ss_dssp TTEEEEEEESSCTTTCCCCC----------HHHHHHHHHHHHHTTCEEEE
T ss_pred cCceEEEEECCCCCCCcCCC----------HHHHHHHHHHHHHcCCEEEE
Confidence 35677776533223443322 24678899999999998875
No 74
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=26.91 E-value=92 Score=28.09 Aligned_cols=40 Identities=8% Similarity=0.066 Sum_probs=26.4
Q ss_pred CCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEEE
Q 019580 92 AGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLSL 141 (339)
Q Consensus 92 ~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~ 141 (339)
.++.+|++.-....+|...+ .+.++.|.++|+++++.+++
T Consensus 159 ~~~~~v~l~~~~nptG~~~~----------~~~l~~i~~~~~~~~~~li~ 198 (411)
T 2o0r_A 159 PRTRALIINSPHNPTGAVLS----------ATELAAIAEIAVAANLVVIT 198 (411)
T ss_dssp TTEEEEEEESSCTTTCCCCC----------HHHHHHHHHHHHHTTCEEEE
T ss_pred cCceEEEEeCCCCCCCCCCC----------HHHHHHHHHHHHHcCCEEEE
Confidence 46777776533223443322 24678899999999998875
No 75
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=26.82 E-value=78 Score=29.21 Aligned_cols=69 Identities=16% Similarity=0.181 Sum_probs=45.7
Q ss_pred CHHHHHHHHHHHHHHHHHCCCeEEEeCCCC---CCCCCC----Cc-----chhhhhc--cCCchHHHHHHHHHHhcCcEE
Q 019580 74 DLAANFATSSRLVKEAASAGAKLLCLPENF---SYVGDK----DG-----DSLKVAE--TLDGPIMQGYCSLARESRVWL 139 (339)
Q Consensus 74 d~~~n~~~~~~~i~~A~~~gadlIVfPE~~---~~~g~~----~~-----~~~~~a~--~~~~~~~~~l~~~A~~~~i~i 139 (339)
+....+++..++++.|++.|||.|=|-=.- .++.+. .. ...+.-. .++.+.+..|.+.|++.|+.+
T Consensus 38 NH~Gsle~A~~li~~Ak~aGAdavKfQ~~k~~tl~s~~~~~fq~~~~~~~~~ye~~~~~~l~~e~~~~L~~~~~~~Gi~~ 117 (385)
T 1vli_A 38 NHDGKLDQAFALIDAAAEAGADAVKFQMFQADRMYQKDPGLYKTAAGKDVSIFSLVQSMEMPAEWILPLLDYCREKQVIF 117 (385)
T ss_dssp TTTTCHHHHHHHHHHHHHHTCSEEEECCBCGGGGTSCCC---------CCCHHHHGGGBSSCGGGHHHHHHHHHHTTCEE
T ss_pred cccccHHHHHHHHHHHHHhCCCEEeeeeeccCcccCcchhhhccCCCCCccHHHHHHhcCCCHHHHHHHHHHHHHcCCcE
Confidence 445667888999999999999999884321 112221 00 1111111 356789999999999999998
Q ss_pred EEe
Q 019580 140 SLG 142 (339)
Q Consensus 140 v~G 142 (339)
+.-
T Consensus 118 ~st 120 (385)
T 1vli_A 118 LST 120 (385)
T ss_dssp ECB
T ss_pred EEc
Confidence 753
No 76
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=26.78 E-value=68 Score=29.01 Aligned_cols=44 Identities=9% Similarity=0.018 Sum_probs=29.1
Q ss_pred HHHHCCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEEE
Q 019580 88 EAASAGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLSL 141 (339)
Q Consensus 88 ~A~~~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~ 141 (339)
++...++.+|+++.....+|...+ .+.++.+.++|+++++.+++
T Consensus 167 ~~i~~~~~~v~l~~p~nptG~~~~----------~~~l~~l~~~~~~~~~~li~ 210 (412)
T 2x5d_A 167 RESIPKPRMMILGFPSNPTAQCVE----------LDFFERVVALAKQYDVMVVH 210 (412)
T ss_dssp HTEESCCSEEEEESSCTTTCCCCC----------HHHHHHHHHHHHHHTCEEEE
T ss_pred HhcccCceEEEECCCCCCCCCcCC----------HHHHHHHHHHHHHcCCEEEE
Confidence 333456788888654333454332 24678899999999998875
No 77
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=26.69 E-value=1e+02 Score=28.03 Aligned_cols=40 Identities=18% Similarity=0.076 Sum_probs=26.9
Q ss_pred CCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEEE
Q 019580 92 AGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLSL 141 (339)
Q Consensus 92 ~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~ 141 (339)
.++.+|+++-....+|... +.+.++.+.++|+++++.+++
T Consensus 193 ~~~~~vil~~p~nptG~~~----------~~~~l~~l~~l~~~~~~~li~ 232 (421)
T 3l8a_A 193 NNVKIYLLCSPHNPGGRVW----------DNDDLIKIAELCKKHGVILVS 232 (421)
T ss_dssp TTEEEEEEESSBTTTTBCC----------CHHHHHHHHHHHHHHTCEEEE
T ss_pred cCCeEEEECCCCCCCCCcC----------CHHHHHHHHHHHHHcCCEEEE
Confidence 5678877744322344322 224688999999999999875
No 78
>4g1u_C Hemin import ATP-binding protein HMUV; membrane transporter, type II ABC importer, HMUT, plasma MEM transport protein-hydrolase complex; 3.01A {Yersinia pestis}
Probab=26.67 E-value=62 Score=27.97 Aligned_cols=67 Identities=12% Similarity=0.019 Sum_probs=41.6
Q ss_pred CCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEEEeeeeeecCCCCceEEEEEEEcCCCceeeeee
Q 019580 93 GAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLSLGGFQEKGSDDAHLCNTHVLVDDAGNIRSTYR 172 (339)
Q Consensus 93 gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~Gs~~e~~~~~~~~yNsa~li~p~G~v~~~y~ 172 (339)
+++++++=|-+ .+..+... ....+.+++++++.++.|++-+ +... .-..+.+..+++. +|+++..-.
T Consensus 165 ~p~lLllDEPt--s~LD~~~~--------~~i~~~l~~l~~~~~~tvi~vt-Hdl~-~~~~~~d~v~vl~-~G~i~~~g~ 231 (266)
T 4g1u_C 165 TPRWLFLDEPT--SALDLYHQ--------QHTLRLLRQLTRQEPLAVCCVL-HDLN-LAALYADRIMLLA-QGKLVACGT 231 (266)
T ss_dssp CCEEEEECCCC--SSCCHHHH--------HHHHHHHHHHHHHSSEEEEEEC-SCHH-HHHHHCSEEEEEE-TTEEEEEEC
T ss_pred CCCEEEEeCcc--ccCCHHHH--------HHHHHHHHHHHHcCCCEEEEEE-cCHH-HHHHhCCEEEEEE-CCEEEEEcC
Confidence 89999999963 55543221 1366778888888777776532 2211 1123456777887 898865433
No 79
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=26.61 E-value=95 Score=26.18 Aligned_cols=77 Identities=6% Similarity=-0.057 Sum_probs=45.6
Q ss_pred cccEEEEEEecC--cC---CHHHHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHh
Q 019580 60 SSVRVAVAQMTS--IN---DLAANFATSSRLVKEAASAGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARE 134 (339)
Q Consensus 60 ~~~rVA~vQ~~~--~~---d~~~n~~~~~~~i~~A~~~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~ 134 (339)
..+++..+.... .. +.+..++.+.+.++.|.+-|++.|+++= .++...+. +.......+.+..+.+.|++
T Consensus 59 ~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~~---~p~~~~~~--~~~~~~~~~~l~~l~~~a~~ 133 (281)
T 3u0h_A 59 RGLVLANLGLPLNLYDSEPVFLRELSLLPDRARLCARLGARSVTAFL---WPSMDEEP--VRYISQLARRIRQVAVELLP 133 (281)
T ss_dssp TTCEECCEECCSCTTSCHHHHHHHHHTHHHHHHHHHHTTCCEEEEEC---CSEESSCH--HHHHHHHHHHHHHHHHHHGG
T ss_pred cCCceEEecccccccCCCHHHHHHHHHHHHHHHHHHHcCCCEEEEee---cCCCCCcc--hhhHHHHHHHHHHHHHHHHH
Confidence 357777666542 11 2345567788899999999999998541 11111111 00111112466778888889
Q ss_pred cCcEEEE
Q 019580 135 SRVWLSL 141 (339)
Q Consensus 135 ~~i~iv~ 141 (339)
+|+.+.+
T Consensus 134 ~Gv~l~l 140 (281)
T 3u0h_A 134 LGMRVGL 140 (281)
T ss_dssp GTCEEEE
T ss_pred cCCEEEE
Confidence 9998754
No 80
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=26.46 E-value=1.3e+02 Score=27.30 Aligned_cols=42 Identities=7% Similarity=-0.151 Sum_probs=27.3
Q ss_pred HCCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEEEe
Q 019580 91 SAGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLSLG 142 (339)
Q Consensus 91 ~~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~G 142 (339)
..++++|++......+|...+ .+.++.+.++|+++++.+++=
T Consensus 180 ~~~~~~v~l~~p~nptG~~~~----------~~~l~~i~~~a~~~~~~li~D 221 (437)
T 3g0t_A 180 TGQFCSIIYSNPNNPTWQCMT----------DEELRIIGELATKHDVIVIED 221 (437)
T ss_dssp TTCCCEEEEESSCTTTCCCCC----------HHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCceEEEEeCCCCCCCCcCC----------HHHHHHHHHHHHHCCcEEEEE
Confidence 456777765433234554332 235788999999999998853
No 81
>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}
Probab=26.44 E-value=1.4e+02 Score=21.89 Aligned_cols=42 Identities=10% Similarity=-0.035 Sum_probs=27.1
Q ss_pred HHHHHHHHHhcCcE-EEEeeeeeecCCCCceEEEEEEEcCCCceeeeee
Q 019580 125 MQGYCSLARESRVW-LSLGGFQEKGSDDAHLCNTHVLVDDAGNIRSTYR 172 (339)
Q Consensus 125 ~~~l~~~A~~~~i~-iv~Gs~~e~~~~~~~~yNsa~li~p~G~v~~~y~ 172 (339)
++.+.+.+++.|+. ++.+ .... .. ... +++.||+|..+..+.
T Consensus 77 vd~~~~~l~~~G~~~~~~~-p~~~--~~-G~~--~~~~DPdGn~iel~~ 119 (128)
T 3g12_A 77 LEKTVQELVKIPGAMCILD-PTDM--PD-GKK--AIVLDPDGHSIELCE 119 (128)
T ss_dssp HHHHHHHHTTSTTCEEEEE-EEEC--C--CEE--EEEECTTCCEEEEEC
T ss_pred HHHHHHHHHHCCCceeccC-ceeC--CC-ccE--EEEECCCCCEEEEEE
Confidence 67777777788988 6543 3332 22 223 889999999865543
No 82
>3ayv_A Putative uncharacterized protein TTHB071; structural genomics, riken structural genomics/proteomics in RSGI, TIM barrel, unknown function; 1.85A {Thermus thermophilus} PDB: 3ayt_A
Probab=26.14 E-value=1.1e+02 Score=25.42 Aligned_cols=64 Identities=16% Similarity=0.011 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEEE
Q 019580 76 AANFATSSRLVKEAASAGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLSL 141 (339)
Q Consensus 76 ~~n~~~~~~~i~~A~~~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~ 141 (339)
+..++.+.+.++.|..-|++.|++.-... .+..... .+.......+.+..+.+.|+++|+.+.+
T Consensus 72 ~~~~~~~~~~i~~A~~lGa~~v~~~~g~~-~~~~~~~-~~~~~~~~~~~l~~l~~~a~~~gv~l~l 135 (254)
T 3ayv_A 72 GLTLRRLLFGLDRAAELGADRAVFHSGIP-HGRTPEE-ALERALPLAEALGLVVRRARTLGVRLLL 135 (254)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEECCCC-TTCCHHH-HHHTHHHHHHHTHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEECCCCC-ccccccc-HHHHHHHHHHHHHHHHHHHhhcCCEEEE
Confidence 45678888999999999999887653321 1111000 0000111123556777888888987753
No 83
>1wdu_A TRAS1 ORF2P; four-layered alpha/beta sandwich, RNA binding protein; 2.40A {Bombyx mori} SCOP: d.151.1.1
Probab=25.86 E-value=65 Score=26.78 Aligned_cols=36 Identities=22% Similarity=0.128 Sum_probs=20.6
Q ss_pred EEEEEecCcCCHHHHHHHHHHHHHHHHHCCCeEEEeCCCC
Q 019580 64 VAVAQMTSINDLAANFATSSRLVKEAASAGAKLLCLPENF 103 (339)
Q Consensus 64 VA~vQ~~~~~d~~~n~~~~~~~i~~A~~~gadlIVfPE~~ 103 (339)
+-++|.|+.+... ..+.+.+ ...+.++|||++.|..
T Consensus 20 lri~s~Nv~~~~~-~~~~l~~---~i~~~~~DIv~lQE~~ 55 (245)
T 1wdu_A 20 YRVLQANLQRKKL-ATAELAI---EAATRKAAIALIQEPY 55 (245)
T ss_dssp EEEEEEECTTCHH-HHHHHHH---HHHHHTCSEEEEESCC
T ss_pred eeeeeeeccccHH-HHHHHHH---HHhhcCCCEEEEEccc
Confidence 4445555543322 2333444 4444689999999974
No 84
>2yxo_A Histidinol phosphatase; metal-dependent, hydrolase; 1.60A {Thermus thermophilus} PDB: 2yz5_A 2z4g_A
Probab=25.74 E-value=1.3e+02 Score=25.21 Aligned_cols=59 Identities=10% Similarity=0.116 Sum_probs=34.3
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCCCC--CCCcchhhhhccCCchHHHHHHHHHHhc-CcEEEEee
Q 019580 82 SSRLVKEAASAGAKLLCLPENFSYVG--DKDGDSLKVAETLDGPIMQGYCSLARES-RVWLSLGG 143 (339)
Q Consensus 82 ~~~~i~~A~~~gadlIVfPE~~~~~g--~~~~~~~~~a~~~~~~~~~~l~~~A~~~-~i~iv~Gs 143 (339)
+.++++.|.+.|.+.|++=+-..... +..... ...-....++.+.++.+++ ++.|+.|.
T Consensus 18 ~ee~v~~A~~~Gl~~iaiTDH~~~~~~~~~~~~~---~~~~~~~y~~~~~~~~~~~~~i~i~~G~ 79 (267)
T 2yxo_A 18 PEAYLEEARAKGLKGVVFTDHSPMPPWYDPESRM---RLEALPFYLLALERVRERAQDLYVGIGL 79 (267)
T ss_dssp HHHHHHHHHHTTCSEEEEEEECCCCTTSSGGGSC---CGGGHHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred HHHHHHHHHHcCCCEEEEcCCCCCCcccCccccc---cHHHHHHHHHHHHHHHHHhcCCcEEEEE
Confidence 34788999999999888776543220 100000 0000112456667777776 89999983
No 85
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=25.40 E-value=1.4e+02 Score=27.16 Aligned_cols=54 Identities=11% Similarity=0.000 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHC--CCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEEEe
Q 019580 79 FATSSRLVKEAASA--GAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLSLG 142 (339)
Q Consensus 79 ~~~~~~~i~~A~~~--gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~G 142 (339)
++.+++.++.+... ++.+|++.-....+|...+ .+.++.+.++|+++++.+++=
T Consensus 175 ~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~----------~~~l~~l~~~~~~~~~~li~D 230 (435)
T 3piu_A 175 ETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMT----------RNELYLLLSFVEDKGIHLISD 230 (435)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCC----------HHHHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCC----------HHHHHHHHHHHHHcCCEEEEe
Confidence 45555556554443 4566554332223454332 236788999999999998753
No 86
>1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9
Probab=25.39 E-value=3e+02 Score=23.59 Aligned_cols=74 Identities=8% Similarity=0.007 Sum_probs=42.5
Q ss_pred CCCceEEEecCCcceEEEeeccCc----c--h-HHHHHHHhcCCceEEEEeCCCCCCCcHHHHHHHHHHHHHhcCcEEEE
Q 019580 195 AGKDIVAVDSPVGRLGPTVCYDLR----F--P-ELYQQLRFQHEAQVLLVPSAFTKVTGQAHWEILLRARAIETQCYVIA 267 (339)
Q Consensus 195 ~G~~~~vf~~~~~kigv~IC~D~~----~--p-e~~r~~~~~~gadlll~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~ 267 (339)
||+...+++.++.|||++--.... + | +.........++|++++.+..... .+. .+-++...-++-++.
T Consensus 96 pg~g~~I~~~~G~kIgVigl~g~~~~~~~~~p~~~~~~~v~~l~~d~IIv~~H~e~t--~Ek---~~la~~~dg~vd~Vv 170 (255)
T 1t70_A 96 PGVGWRTFDVNGEKLTVVNLLGRVFMEAVDNPFRTMDALLERDDLGTVFVDFHAEAT--SEK---EAMGWHLAGRVAAVI 170 (255)
T ss_dssp SSCSEEEEECSSSEEEEEEEECCTTSCCCSCHHHHHHHHTTCSSCCEEEEEEECSCH--HHH---HHHHHHHTTSSSEEE
T ss_pred CCCCeEEEEECCEEEEEEEeecCcCcccccCHHHHHHHHHHHhCCCEEEEEeCCCCh--HHH---HHHHHhCCCCeEEEE
Confidence 677888999999999985432221 1 2 112222223489999998765432 111 122234455688887
Q ss_pred ECCccC
Q 019580 268 AAQAGK 273 (339)
Q Consensus 268 an~~G~ 273 (339)
.+.+-.
T Consensus 171 GgHTHv 176 (255)
T 1t70_A 171 GTHTHV 176 (255)
T ss_dssp EESSCS
T ss_pred eCCCCc
Confidence 766543
No 87
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=24.95 E-value=98 Score=27.53 Aligned_cols=40 Identities=5% Similarity=-0.027 Sum_probs=25.5
Q ss_pred CCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEEE
Q 019580 92 AGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLSL 141 (339)
Q Consensus 92 ~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~ 141 (339)
.++++|++.-....+|...+ .+.++.+.++|+++++.+++
T Consensus 162 ~~~~~v~l~~p~nptG~~~~----------~~~l~~i~~~~~~~~~~li~ 201 (386)
T 1u08_A 162 ERTRLVILNTPHNPSATVWQ----------QADFAALWQAIAGHEIFVIS 201 (386)
T ss_dssp TTEEEEEEESSCTTTCCCCC----------HHHHHHHHHHHTTSCCEEEE
T ss_pred ccCEEEEEeCCCCCCCccCC----------HHHHHHHHHHHHHcCcEEEE
Confidence 45677776422223343322 24678899999999998875
No 88
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=24.53 E-value=2.2e+02 Score=22.36 Aligned_cols=61 Identities=11% Similarity=0.084 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEE
Q 019580 75 LAANFATSSRLVKEAASAGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLS 140 (339)
Q Consensus 75 ~~~n~~~~~~~i~~A~~~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv 140 (339)
.+...+.+.++++.+.+.++.+|++--.. .+......... .....-+.++++|+++++.++
T Consensus 112 ~~~~~~~l~~~i~~~~~~~~~vil~~p~~-~~~~~~~~~~~----~~~~~n~~~~~~a~~~~~~~v 172 (216)
T 3rjt_A 112 IDEYRDTLRHLVATTKPRVREMFLLSPFY-LEPNRSDPMRK----TVDAYIEAMRDVAASEHVPFV 172 (216)
T ss_dssp HHHHHHHHHHHHHHHGGGSSEEEEECCCC-CCCCTTSHHHH----HHHHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHHHHHhcCCeEEEECCCc-CCCCcchHHHH----HHHHHHHHHHHHHHHcCCeEE
Confidence 56667777788888877799999883111 11111111100 112456778889999887654
No 89
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=24.49 E-value=1.7e+02 Score=25.67 Aligned_cols=65 Identities=20% Similarity=0.155 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCcc-h------------hhhhccCCchHHHHHHHHHHhcCcEEEE
Q 019580 76 AANFATSSRLVKEAASAGAKLLCLPENFSYVGDKDGD-S------------LKVAETLDGPIMQGYCSLARESRVWLSL 141 (339)
Q Consensus 76 ~~n~~~~~~~i~~A~~~gadlIVfPE~~~~~g~~~~~-~------------~~~a~~~~~~~~~~l~~~A~~~~i~iv~ 141 (339)
+..++.+.+.++.|.+-|++.|+-|=.+ ..|..... . .+.......+.++.+.+.|+++|+.+.+
T Consensus 105 ~~~~~~~~~~i~~A~~lG~~~v~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~l 182 (335)
T 2qw5_A 105 QEALEYLKSRVDITAALGGEIMMGPIVI-PYGVFPTTDFNEPIWSDELQEHLKVRYANAQPILDKLGEYAEIKKVKLAI 182 (335)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEECCSS-CTTCCCBCTTCCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEeccccC-ccccccCCcccccccccchhhhHHHHHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 4567888899999999999999765321 11211100 0 1111111234667788888889987643
No 90
>1o7j_A L-asparaginase; atomic resolution, hydrolase; 1.0A {Erwinia chrysanthemi} SCOP: c.88.1.1 PDB: 1hfj_A 1hfk_A* 1hg0_A 1hg1_A 1hfw_A* 1jsr_A* 1jsl_A 2gvn_A 1zcf_A 2hln_A* 2jk0_A
Probab=24.35 E-value=2.4e+02 Score=25.11 Aligned_cols=65 Identities=15% Similarity=0.141 Sum_probs=46.4
Q ss_pred CcceEEEeeccCcchHHHHHHHhcCCceEEEEeCCCCCCCcHHHHHHHHHHHHHhcCcEEEEECCccC
Q 019580 206 VGRLGPTVCYDLRFPELYQQLRFQHEAQVLLVPSAFTKVTGQAHWEILLRARAIETQCYVIAAAQAGK 273 (339)
Q Consensus 206 ~~kigv~IC~D~~~pe~~r~~~~~~gadlll~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~an~~G~ 273 (339)
..++.++-+|=-.-+++.+.+. ..|++-|+.-+...... .. +..-...+|.+.|++|+.++++..
T Consensus 217 ~~~V~il~~~pG~~~~~l~~~~-~~g~~GiVle~~G~Gn~-p~-~~~~~l~~a~~~Gi~VV~~Sr~~~ 281 (327)
T 1o7j_A 217 LPKVDILYGYQDDPEYLYDAAI-QHGVKGIVYAGMGAGSV-SV-RGIAGMRKALEKGVVVMRSTRTGN 281 (327)
T ss_dssp CCCEEEEECCTTCCTHHHHHHH-HTTCSEEEEEEBTTTBC-CH-HHHHHHHHHHHTTCEEEEEESSSB
T ss_pred CCcEEEEEeCCCCCHHHHHHHH-hCCCCEEEEeeECCCCC-CH-HHHHHHHHHHHCCceEEEECCCCC
Confidence 3589999999888899998887 68888887754322111 12 222345667899999999999764
No 91
>1nmo_A Hypothetical protein YBGI; toroidal structure, structure 2 project, S2F, structural genomics, unknown function; 2.20A {Escherichia coli} SCOP: c.135.1.1 PDB: 1nmp_A
Probab=24.30 E-value=1.6e+02 Score=25.15 Aligned_cols=58 Identities=5% Similarity=-0.109 Sum_probs=36.0
Q ss_pred EEEeeccCcchHHHHHHHhcCCceEEEEe--CCC-CCCCcHHHHHHHHHHHHHhcCcEEEEEC
Q 019580 210 GPTVCYDLRFPELYQQLRFQHEAQVLLVP--SAF-TKVTGQAHWEILLRARAIETQCYVIAAA 269 (339)
Q Consensus 210 gv~IC~D~~~pe~~r~~~~~~gadlll~p--s~~-~~~~~~~~~~~~~~~rA~en~~~vv~an 269 (339)
.+++|-|... +...+.. ..|+|+|+.- --| ................+++|++.++.+-
T Consensus 37 ~I~~~lD~t~-~vi~eAi-~~~adlIitHHP~~f~~~~~~i~~~~~~~i~~li~~~I~ly~~H 97 (247)
T 1nmo_A 37 KIVTGVTASQ-ALLDEAV-RLGADAVIVHHGYFWKGESPVIRGMKRNRLKTLLANDINLYGWH 97 (247)
T ss_dssp EEEEEEECCH-HHHHHHH-HTTCSEEEEEECSCCTTSCCCCCTHHHHHHHHHHHTTCEEEECC
T ss_pred EEEEEEcCCH-HHHHHHH-hCCCCEEEECCchhccCCCccccchHHHHHHHHHHCCCEEEEee
Confidence 6788888654 4445555 6899999973 334 2211111223446677899999988753
No 92
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=24.30 E-value=67 Score=28.84 Aligned_cols=39 Identities=13% Similarity=0.112 Sum_probs=26.8
Q ss_pred CCeEE-EeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEEE
Q 019580 93 GAKLL-CLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLSL 141 (339)
Q Consensus 93 gadlI-VfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~ 141 (339)
++++| ++|.....+|...+ .+.++.+.++|+++++.+++
T Consensus 162 ~~~~v~~~~~~~nptG~~~~----------~~~l~~l~~~~~~~~~~li~ 201 (397)
T 2zyj_A 162 RPRFLYLIPSFQNPTGGLTP----------LPARKRLLQMVMERGLVVVE 201 (397)
T ss_dssp CCSCEEECCBSCTTTCCBCC----------HHHHHHHHHHHHHHTCCEEE
T ss_pred CCeEEEECCCCcCCCCCcCC----------HHHHHHHHHHHHHcCCEEEE
Confidence 67776 56775434554332 24678899999999998875
No 93
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=24.30 E-value=80 Score=28.47 Aligned_cols=40 Identities=23% Similarity=0.149 Sum_probs=26.1
Q ss_pred CCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEEE
Q 019580 92 AGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLSL 141 (339)
Q Consensus 92 ~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~ 141 (339)
.+..+|++.+....+|...+ .+.++.+.++|+++++.+++
T Consensus 176 ~~~~~v~i~~p~nptG~~~~----------~~~l~~i~~~~~~~~~~li~ 215 (416)
T 1bw0_A 176 DKTKLLIVTNPSNPCGSNFS----------RKHVEDIVRLAEELRLPLFS 215 (416)
T ss_dssp TTEEEEEEESSCTTTCCCCC----------HHHHHHHHHHHHHHTCCEEE
T ss_pred cCCeEEEEeCCCCCCCcccC----------HHHHHHHHHHHHHcCCEEEE
Confidence 34566666554333444322 24688899999999998875
No 94
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=24.05 E-value=84 Score=28.13 Aligned_cols=40 Identities=13% Similarity=0.171 Sum_probs=25.6
Q ss_pred CCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEEE
Q 019580 92 AGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLSL 141 (339)
Q Consensus 92 ~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~ 141 (339)
.++.+|+++-....+|...+ .+.++.+.++|+++++.+++
T Consensus 173 ~~~~~v~~~~p~nptG~~~~----------~~~l~~l~~~~~~~~~~li~ 212 (389)
T 1o4s_A 173 GKTKAVLINSPNNPTGVVYR----------REFLEGLVRLAKKRNFYIIS 212 (389)
T ss_dssp TTEEEEEEESSCTTTCCCCC----------HHHHHHHHHHHHHHTCEEEE
T ss_pred cCceEEEEcCCCCCCCCCCC----------HHHHHHHHHHHHHcCCEEEE
Confidence 35666666433223443322 24678899999999998875
No 95
>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*
Probab=24.02 E-value=1.3e+02 Score=21.50 Aligned_cols=45 Identities=11% Similarity=0.124 Sum_probs=28.6
Q ss_pred HHHHHHHHHhcCcEEEEeeeeeecCCCCceEEEEEEEcCCCceeeee
Q 019580 125 MQGYCSLARESRVWLSLGGFQEKGSDDAHLCNTHVLVDDAGNIRSTY 171 (339)
Q Consensus 125 ~~~l~~~A~~~~i~iv~Gs~~e~~~~~~~~yNsa~li~p~G~v~~~y 171 (339)
++.+.+.+++.|+.++.+.. ... .....+..+++.||+|..+..+
T Consensus 84 ~~~~~~~l~~~G~~~~~~~~-~~~-~~~g~~~~~~~~DPdG~~iel~ 128 (133)
T 3ey7_A 84 LSDAMKHVEDQGVTIMEGPV-KRT-GAQGAITSFYFRDPDGNLIEVS 128 (133)
T ss_dssp HHHHHHHHHHTTCCCCEEEE-EEE-ETTEEEEEEEEECTTCCEEEEE
T ss_pred HHHHHHHHHHCCCccccCCc-ccc-CCCCCeEEEEEECCCCCEEEEE
Confidence 56666666777888865522 221 2223456788999999886543
No 96
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=24.02 E-value=1e+02 Score=25.89 Aligned_cols=58 Identities=12% Similarity=0.011 Sum_probs=41.9
Q ss_pred ccEEEEEEecCcCCHHHHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEE
Q 019580 61 SVRVAVAQMTSINDLAANFATSSRLVKEAASAGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLS 140 (339)
Q Consensus 61 ~~rVA~vQ~~~~~d~~~n~~~~~~~i~~A~~~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv 140 (339)
.+++..+..... ..++.+.+.++.|.+-|++.|+++- + .+.++.+.+.|+++|+.+.
T Consensus 74 gl~i~~~~~~~~----~~~~~~~~~i~~A~~lGa~~v~~~p-----~--------------~~~l~~l~~~a~~~gv~l~ 130 (257)
T 3lmz_A 74 KVTGYAVGPIYM----KSEEEIDRAFDYAKRVGVKLIVGVP-----N--------------YELLPYVDKKVKEYDFHYA 130 (257)
T ss_dssp TCEEEEEEEEEE----CSHHHHHHHHHHHHHHTCSEEEEEE-----C--------------GGGHHHHHHHHHHHTCEEE
T ss_pred CCeEEEEecccc----CCHHHHHHHHHHHHHhCCCEEEecC-----C--------------HHHHHHHHHHHHHcCCEEE
Confidence 577777665533 3466778888888888999888741 1 1356789999999999875
Q ss_pred E
Q 019580 141 L 141 (339)
Q Consensus 141 ~ 141 (339)
+
T Consensus 131 l 131 (257)
T 3lmz_A 131 I 131 (257)
T ss_dssp E
T ss_pred E
Confidence 3
No 97
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=23.94 E-value=1.7e+02 Score=25.86 Aligned_cols=41 Identities=15% Similarity=0.102 Sum_probs=26.9
Q ss_pred CCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEEEe
Q 019580 92 AGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLSLG 142 (339)
Q Consensus 92 ~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~G 142 (339)
.++.+++.+-....+|...+ .+.++.+.++|+++++.+++=
T Consensus 172 ~~~~~v~~~~p~nptG~~~~----------~~~l~~l~~~~~~~~~~li~D 212 (397)
T 3fsl_A 172 AGSIVLLHPCCHNPTGADLT----------NDQWDAVIEILKARELIPFLD 212 (397)
T ss_dssp TTCEEEECSSSCTTTCCCCC----------HHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCEEEEeCCCCCCCCcCCC----------HHHHHHHHHHHHhCCEEEEEe
Confidence 34567776654334454332 246788999999999988853
No 98
>2wlt_A L-asparaginase; hydrolase; 1.40A {Helicobacter pylori} PDB: 2wt4_A
Probab=23.84 E-value=2.6e+02 Score=24.95 Aligned_cols=65 Identities=11% Similarity=0.085 Sum_probs=46.5
Q ss_pred CcceEEEeeccCcchHHHHHHHhcCCceEEEEeCCCCCCCcHHHHHHHHHHHHHhcCcEEEEECCccC
Q 019580 206 VGRLGPTVCYDLRFPELYQQLRFQHEAQVLLVPSAFTKVTGQAHWEILLRARAIETQCYVIAAAQAGK 273 (339)
Q Consensus 206 ~~kigv~IC~D~~~pe~~r~~~~~~gadlll~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~an~~G~ 273 (339)
..++.++-+|=-.-+++.+.+. ..|++-|+.-+...... .. +..-...+|.+.|++|+.++++..
T Consensus 218 ~~~V~il~~~pG~~~~~l~~~~-~~g~~GiVle~~G~Gn~-p~-~~~~~l~~a~~~Gi~VV~~Sr~~~ 282 (332)
T 2wlt_A 218 LPKVDIIYTHAGMTPDLFQASL-NSHAKGVVIAGVGNGNV-SA-GFLKAMQEASQMGVVIVRSSRVGS 282 (332)
T ss_dssp CCCEEEEECCTTCCTHHHHHHH-HTTCSEEEEEEBTTTBC-CH-HHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCcEEEEEeCCCCCHHHHHHHH-hCCCCEEEEeeECCCCC-CH-HHHHHHHHHHHCCCEEEEECCCCC
Confidence 4689999999888899998887 68888887754322111 12 222345568899999999999764
No 99
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=23.62 E-value=1.8e+02 Score=24.67 Aligned_cols=65 Identities=11% Similarity=-0.099 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHHHCCCeEEEeCCCCCCC-CCCCcchhhhhccCCchHHHHHHHHHHhcCcEEE
Q 019580 76 AANFATSSRLVKEAASAGAKLLCLPENFSYV-GDKDGDSLKVAETLDGPIMQGYCSLARESRVWLS 140 (339)
Q Consensus 76 ~~n~~~~~~~i~~A~~~gadlIVfPE~~~~~-g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv 140 (339)
+..++.+.+.++.|.+-|++.|+.+=..... .+......+.......+.+..+.+.|+++|+.+.
T Consensus 84 ~~~~~~~~~~i~~a~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~ 149 (294)
T 3vni_A 84 KNAKAFYTDLLKRLYKLDVHLIGGALYSYWPIDYTKTIDKKGDWERSVESVREVAKVAEACGVDFC 149 (294)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEESTTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHHHHHhCCCeeeccccCCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEE
Confidence 4567888889999999999999742110000 1110000000111112467788888899999864
No 100
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=23.36 E-value=1.4e+02 Score=26.73 Aligned_cols=40 Identities=5% Similarity=-0.040 Sum_probs=27.7
Q ss_pred CCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEEEe
Q 019580 93 GAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLSLG 142 (339)
Q Consensus 93 gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~G 142 (339)
++-+|+++.....+|...+ .+.++.+.++|+++++.+++=
T Consensus 183 ~~~~v~~~~p~nptG~~~~----------~~~l~~l~~~~~~~~~~li~D 222 (412)
T 1ajs_A 183 FSIFVLHACAHNPTGTDPT----------PEQWKQIASVMKRRFLFPFFD 222 (412)
T ss_dssp TCEEEEESSSCTTTCCCCC----------HHHHHHHHHHHHHHTCEEEEE
T ss_pred CcEEEEECCCCCCCCCCCC----------HHHHHHHHHHHHHCCCEEEEE
Confidence 4557767776444554332 246788999999999998864
No 101
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=23.30 E-value=1.6e+02 Score=26.53 Aligned_cols=41 Identities=10% Similarity=0.020 Sum_probs=27.7
Q ss_pred CCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEEEe
Q 019580 92 AGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLSLG 142 (339)
Q Consensus 92 ~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~G 142 (339)
.+..+|+.|-....+|...+ .+.++.+.++|+++++.++.=
T Consensus 194 ~~~~~v~i~~p~NPtG~~~~----------~~~l~~i~~~~~~~~~~li~D 234 (420)
T 4f4e_A 194 PGTIVVLHACCHNPTGVDLN----------DAQWAQVVEVVKARRLVPFLD 234 (420)
T ss_dssp TTCEEEEECSSCTTTCCCCC----------HHHHHHHHHHHHHHTCEEEEE
T ss_pred CCCEEEEeCCCCCCCCCCCC----------HHHHHHHHHHHHHCCcEEEEc
Confidence 35667777665444554432 246788999999999988753
No 102
>1wsa_A Asparaginase, asparagine amidohydrolase; periplasmic; 2.20A {Wolinella succinogenes} SCOP: c.88.1.1
Probab=23.12 E-value=2.7e+02 Score=24.85 Aligned_cols=65 Identities=11% Similarity=-0.030 Sum_probs=46.4
Q ss_pred CcceEEEeeccCcchHHHHHHHhcCCceEEEEeCCCCCCCcHHHHHHHHHHHHHhcCcEEEEECCccC
Q 019580 206 VGRLGPTVCYDLRFPELYQQLRFQHEAQVLLVPSAFTKVTGQAHWEILLRARAIETQCYVIAAAQAGK 273 (339)
Q Consensus 206 ~~kigv~IC~D~~~pe~~r~~~~~~gadlll~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~an~~G~ 273 (339)
..++.++-+|=-.-+++.+.+. ..|++-|+.-+...... .. +..-...+|.+.|++|+.++++..
T Consensus 215 ~~~V~il~~~pG~~~~~l~~~~-~~g~~GiVle~~G~Gn~-p~-~~~~~l~~a~~~gi~VV~~Sr~~~ 279 (330)
T 1wsa_A 215 LPRVDILYAHPDDTDVLVNAAL-QAGAKGIIHAGMGNGNP-FP-LTQNALEKAAKSGVVVARSSRVGS 279 (330)
T ss_dssp CCCEEEEECCSSCCSHHHHHHH-HTTCSEEEEEEBTTTBC-CH-HHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCceEEEEeCCCCCHHHHHHHH-hCCCCEEEEeeECCCCC-CH-HHHHHHHHHHHCCCEEEEECCCCC
Confidence 3589999999888899998887 68888887754322111 12 222345568899999999999764
No 103
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=23.10 E-value=1.1e+02 Score=27.03 Aligned_cols=20 Identities=5% Similarity=-0.004 Sum_probs=16.7
Q ss_pred hHHHHHHHHHHhcCcEEEEe
Q 019580 123 PIMQGYCSLARESRVWLSLG 142 (339)
Q Consensus 123 ~~~~~l~~~A~~~~i~iv~G 142 (339)
+.++.+.++|+++++.+++=
T Consensus 184 ~~l~~i~~~~~~~~~~li~D 203 (391)
T 4dq6_A 184 DELKKLGDICLKHNVKIISD 203 (391)
T ss_dssp HHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHcCCEEEee
Confidence 46788999999999998753
No 104
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=23.02 E-value=1e+02 Score=26.88 Aligned_cols=39 Identities=10% Similarity=-0.014 Sum_probs=25.3
Q ss_pred CeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEEEe
Q 019580 94 AKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLSLG 142 (339)
Q Consensus 94 adlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~G 142 (339)
+++|+++.....+|...+ .+.++.+.++|+++++.+++=
T Consensus 145 ~~~v~i~~p~nptG~~~~----------~~~l~~i~~~~~~~~~~li~D 183 (361)
T 3ftb_A 145 VDSVIIGNPNNPNGGLIN----------KEKFIHVLKLAEEKKKTIIID 183 (361)
T ss_dssp CSEEEEETTBTTTTBCCC----------HHHHHHHHHHHHHHTCEEEEE
T ss_pred CCEEEEeCCCCCCCCCCC----------HHHHHHHHHHhhhcCCEEEEE
Confidence 667666554333443322 246788999999999988763
No 105
>1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A*
Probab=22.75 E-value=2.7e+02 Score=22.82 Aligned_cols=57 Identities=14% Similarity=-0.062 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEE
Q 019580 79 FATSSRLVKEAASAGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLS 140 (339)
Q Consensus 79 ~~~~~~~i~~A~~~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv 140 (339)
.+.+.++++.+.+.++.+|+.-=. ....+..... .....++.+.++++|+++++.++
T Consensus 111 ~~~l~~~i~~~~~~g~~vil~tp~-p~~~~~~~~~----~~~~~~y~~~~~~vA~~~~v~~i 167 (233)
T 1k7c_A 111 PAYLENAAKLFTAKGAKVILSSQT-PNNPWETGTF----VNSPTRFVEYAELAAEVAGVEYV 167 (233)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCC-CCCTTTTSSC----CCCCCHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEECCC-CccccCCCcc----ccchHHHHHHHHHHHHHhCCeEE
Confidence 333455555556678887766211 1111110100 11234677889999999998875
No 106
>3teb_A Endonuclease/exonuclease/phosphatase; PSI-biology, MCSG, midwest center for structural genomics; 2.99A {Leptotrichia buccalis c-1013-b}
Probab=22.65 E-value=80 Score=26.22 Aligned_cols=41 Identities=7% Similarity=0.188 Sum_probs=27.0
Q ss_pred cccEEEEEEecCc--CCHHHHHHHHHHHHHHHHHCCCeEEEeCCCC
Q 019580 60 SSVRVAVAQMTSI--NDLAANFATSSRLVKEAASAGAKLLCLPENF 103 (339)
Q Consensus 60 ~~~rVA~vQ~~~~--~d~~~n~~~~~~~i~~A~~~gadlIVfPE~~ 103 (339)
++|||+..+..-. .+....++++.+.+++ .++|||++-|..
T Consensus 2 ~~l~v~t~Ni~~~~~~~~~~~~~~i~~~i~~---~~~DIi~LQEv~ 44 (266)
T 3teb_A 2 NAMKILTVNVHAWLEENQMEKIDILARTIAE---KQYDVIAMQEVN 44 (266)
T ss_dssp -CEEEEEEECCTTCSTTHHHHHHHHHHHHHH---HTCSEEEEEEEE
T ss_pred CceEEEEEecccccCcchhHHHHHHHHHHHh---cCCCEEEEEEcc
Confidence 3578877666532 3445566666666543 589999999973
No 107
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis}
Probab=22.32 E-value=2.2e+02 Score=22.23 Aligned_cols=75 Identities=9% Similarity=-0.066 Sum_probs=44.2
Q ss_pred cEEEEEEecC---c-----CCHHHHHHHHHHHHHHHHHCCCeEEEeCCCCCCCC--CCCcchhhhhccCCchHHHHHHHH
Q 019580 62 VRVAVAQMTS---I-----NDLAANFATSSRLVKEAASAGAKLLCLPENFSYVG--DKDGDSLKVAETLDGPIMQGYCSL 131 (339)
Q Consensus 62 ~rVA~vQ~~~---~-----~d~~~n~~~~~~~i~~A~~~gadlIVfPE~~~~~g--~~~~~~~~~a~~~~~~~~~~l~~~ 131 (339)
..+.+++... . .+.+...+.+.++++.+.+.++.+++.--.. ... +.... . ........-+.++++
T Consensus 75 pd~vvi~~G~ND~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~vil~~~~p-~~~~~~~~~~--~-~~~~~~~~n~~l~~~ 150 (204)
T 3p94_A 75 PKAVVILAGINDIAHNNGVIALENVFGNLVSMAELAKANHIKVIFCSVLP-AYDFPWRPGM--Q-PADKVIQLNKWIKEY 150 (204)
T ss_dssp EEEEEEECCHHHHTTTTSCCCHHHHHHHHHHHHHHHHHTTCEEEEECCCC-CSCBTTBTTC--C-CHHHHHHHHHHHHHH
T ss_pred CCEEEEEeecCccccccCCCCHHHHHHHHHHHHHHHHhCCCeEEEEeCCC-CCCCCCCccc--c-HHHHHHHHHHHHHHH
Confidence 4777877763 1 2566667777777777777899998874321 111 11100 0 000112456678999
Q ss_pred HHhcCcEEE
Q 019580 132 ARESRVWLS 140 (339)
Q Consensus 132 A~~~~i~iv 140 (339)
|+++++.++
T Consensus 151 a~~~~v~~i 159 (204)
T 3p94_A 151 ADKNGLTYV 159 (204)
T ss_dssp HHHTTCEEE
T ss_pred HHHcCCcEE
Confidence 999998765
No 108
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=22.22 E-value=2e+02 Score=26.45 Aligned_cols=39 Identities=15% Similarity=0.024 Sum_probs=26.6
Q ss_pred CCeEE-EeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEEE
Q 019580 93 GAKLL-CLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLSL 141 (339)
Q Consensus 93 gadlI-VfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~ 141 (339)
++.+| +.|-....+|...+ .+.++.|.++|+++++.||.
T Consensus 216 ~~k~v~~~~~~~NPtG~~~~----------~~~l~~i~~la~~~~~~lI~ 255 (448)
T 3aow_A 216 KVKVVYTVPTFQNPAGVTMN----------EDRRKYLLELASEYDFIVVE 255 (448)
T ss_dssp CEEEEEECCSSCTTTCCCCC----------HHHHHHHHHHHHHHTCEEEE
T ss_pred CCeEEEECCCCCCCcCCCCC----------HHHHHHHHHHHHHcCCEEEE
Confidence 67886 56654334454332 24678899999999998875
No 109
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=22.15 E-value=1.2e+02 Score=28.76 Aligned_cols=44 Identities=14% Similarity=0.129 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEE
Q 019580 80 ATSSRLVKEAASAGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLS 140 (339)
Q Consensus 80 ~~~~~~i~~A~~~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv 140 (339)
+...+.+++|.+.|+.+||+.|.+. .....++.+.|+++++.++
T Consensus 47 ~~v~~~v~e~~~~Gv~~viis~Gf~-----------------~~~~~~l~~~A~~~g~rli 90 (480)
T 3dmy_A 47 EYAAELANQALDRNLNVMMFSDNVT-----------------LEDEIQLKTRAREKGLLVM 90 (480)
T ss_dssp HHHHHHHHHHHHTTCEEEECCCCCC-----------------HHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHhcCCCEEEECCCCC-----------------HHHHHHHHHHHHHcCCEEE
Confidence 4456677788888999999988752 1355789999999999885
No 110
>1vpl_A ABC transporter, ATP-binding protein; TM0544, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.10A {Thermotoga maritima} SCOP: c.37.1.12
Probab=22.08 E-value=1.3e+02 Score=25.76 Aligned_cols=70 Identities=16% Similarity=0.182 Sum_probs=41.0
Q ss_pred HHHHHHCCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEEEeeeeeecCCCCceEEEEEEEcCCC
Q 019580 86 VKEAASAGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLSLGGFQEKGSDDAHLCNTHVLVDDAG 165 (339)
Q Consensus 86 i~~A~~~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~Gs~~e~~~~~~~~yNsa~li~p~G 165 (339)
+..|...+++++++=|.+ .+..+... ..+.+.|.+++++ +..|++-+ +... .-..+.+..+++. +|
T Consensus 157 lAraL~~~p~lllLDEPt--s~LD~~~~--------~~l~~~l~~l~~~-g~tiiivt-Hd~~-~~~~~~d~v~~l~-~G 222 (256)
T 1vpl_A 157 IARALMVNPRLAILDEPT--SGLDVLNA--------REVRKILKQASQE-GLTILVSS-HNML-EVEFLCDRIALIH-NG 222 (256)
T ss_dssp HHHHHTTCCSEEEEESTT--TTCCHHHH--------HHHHHHHHHHHHT-TCEEEEEE-CCHH-HHTTTCSEEEEEE-TT
T ss_pred HHHHHHcCCCEEEEeCCc--cccCHHHH--------HHHHHHHHHHHhC-CCEEEEEc-CCHH-HHHHHCCEEEEEE-CC
Confidence 445566789999999963 45543221 1355667777654 66666543 2221 1123456677776 89
Q ss_pred ceee
Q 019580 166 NIRS 169 (339)
Q Consensus 166 ~v~~ 169 (339)
+++.
T Consensus 223 ~i~~ 226 (256)
T 1vpl_A 223 TIVE 226 (256)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8754
No 111
>4h41_A Putative alpha-L-fucosidase; hydrolase, carbohydrate metabolism, HOST glycans, structural genomics; HET: MSE 1PE PE4 PG4 PG6; 1.80A {Bacteroides thetaiotaomicron}
Probab=22.01 E-value=1.7e+02 Score=26.48 Aligned_cols=63 Identities=13% Similarity=0.029 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHCCCeEEEeCCCCCCCCC--CCcchh--hhhccCCchHHHHHHHHHHhcCcEEEEeee
Q 019580 81 TSSRLVKEAASAGAKLLCLPENFSYVGD--KDGDSL--KVAETLDGPIMQGYCSLARESRVWLSLGGF 144 (339)
Q Consensus 81 ~~~~~i~~A~~~gadlIVfPE~~~~~g~--~~~~~~--~~a~~~~~~~~~~l~~~A~~~~i~iv~Gs~ 144 (339)
+..+.++.+++.|++.||+-... .-|+ .+.... ........+.++.+.+.|+++|+.|.+|.+
T Consensus 55 eW~~~~~~mK~~GikyvIl~~~~-~~gf~~~pS~~~~~~~~~~p~~Dlv~~~l~aa~k~Gmkv~~Gly 121 (340)
T 4h41_A 55 EWDLDFQHMKRIGIDTVIMIRSG-YRKFMTYPSPYLLKKGCYMPSVDLVDMYLRLAEKYNMKFYFGLY 121 (340)
T ss_dssp HHHHHHHHHHHTTCCEEEESCSE-ETTEESSCCHHHHHTTCCCCSBCHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHcCCCEEEEEEEe-eCCeeccCcccccccCccCCcccHHHHHHHHHHHhCCeEEEecC
Confidence 34455666677899999986542 1111 111111 111112356899999999999999999954
No 112
>1nns_A L-asparaginase II; amidrohydrolase, crystallographic comparison hydrolase; 1.95A {Escherichia coli} SCOP: c.88.1.1 PDB: 3eca_A 1ho3_A 1jaz_A 1ihd_A 1jja_A 4eca_A*
Probab=21.98 E-value=2.9e+02 Score=24.58 Aligned_cols=65 Identities=11% Similarity=-0.042 Sum_probs=46.3
Q ss_pred CcceEEEeeccCcchHHHHHHHhcCCceEEEEeCCCCCCCcHHHHHHHHHHHHHhcCcEEEEECCccC
Q 019580 206 VGRLGPTVCYDLRFPELYQQLRFQHEAQVLLVPSAFTKVTGQAHWEILLRARAIETQCYVIAAAQAGK 273 (339)
Q Consensus 206 ~~kigv~IC~D~~~pe~~r~~~~~~gadlll~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~an~~G~ 273 (339)
..++.++-+|=-.-+++.+.+. ..|++=|+.-+...... . .+..-...+|.+.|++|+.++++..
T Consensus 211 ~~~V~il~~~pG~~~~~l~~~~-~~g~~GiVl~~~G~Gn~-p-~~~~~~l~~a~~~gi~VV~~Sr~~~ 275 (326)
T 1nns_A 211 LPKVGIVYNYANASDLPAKALV-DAGYDGIVSAGVGNGNL-Y-KSVFDTLATAAKTGTAVVRSSRVPT 275 (326)
T ss_dssp CCCEEEEECCTTCCSHHHHHHH-HTTCSEEEEEEBTTTBC-C-HHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCceEEEEeCCCCCHHHHHHHH-hCCCCEEEEeeECCCCC-C-HHHHHHHHHHHHCCCEEEEECCCCC
Confidence 3589999999888899988887 68888887754322111 1 2232345678899999999999764
No 113
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=21.54 E-value=2.1e+02 Score=22.20 Aligned_cols=70 Identities=16% Similarity=0.090 Sum_probs=43.0
Q ss_pred cEEEEEEecCc-----CCHHHHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcC
Q 019580 62 VRVAVAQMTSI-----NDLAANFATSSRLVKEAASAGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESR 136 (339)
Q Consensus 62 ~rVA~vQ~~~~-----~d~~~n~~~~~~~i~~A~~~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~ 136 (339)
..+.+++...- .+.++..+.+.++++.+.+.++.+|+.--.. ...+. .. .....-+.++++|++++
T Consensus 63 pd~Vii~~G~ND~~~~~~~~~~~~~l~~li~~~~~~~~~vil~~~~~-p~~~~-~~-------~~~~~n~~~~~~a~~~~ 133 (190)
T 1ivn_A 63 PRWVLVELGGNDGLRGFQPQQTEQTLRQILQDVKAANAEPLLMQIRL-PANYG-RR-------YNEAFSAIYPKLAKEFD 133 (190)
T ss_dssp CSEEEEECCTTTTSSSCCHHHHHHHHHHHHHHHHHTTCEEEEECCCC-CGGGC-HH-------HHHHHHHHHHHHHHHTT
T ss_pred CCEEEEEeeccccccCCCHHHHHHHHHHHHHHHHHcCCCEEEEeccC-Ccchh-HH-------HHHHHHHHHHHHHHHcC
Confidence 36777777631 3556667777777777777789988763211 11111 11 11235677899999998
Q ss_pred cEEE
Q 019580 137 VWLS 140 (339)
Q Consensus 137 i~iv 140 (339)
+.++
T Consensus 134 v~~i 137 (190)
T 1ivn_A 134 VPLL 137 (190)
T ss_dssp CCEE
T ss_pred CeEE
Confidence 8765
No 114
>2yyb_A Hypothetical protein TTHA1606; structural genomics, unknown function; 2.60A {Thermus thermophilus}
Probab=21.43 E-value=2.1e+02 Score=24.29 Aligned_cols=49 Identities=8% Similarity=-0.006 Sum_probs=32.1
Q ss_pred HHHHHHHHHCCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEEE
Q 019580 83 SRLVKEAASAGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLSL 141 (339)
Q Consensus 83 ~~~i~~A~~~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~ 141 (339)
.+.+++|.++|+|+||-=....+ +...- ......+....+.+++|.+..
T Consensus 47 ~~vi~eAi~~~adlIitHHp~~f-~~~~~---------~~~~~~~~i~~li~~~I~ly~ 95 (242)
T 2yyb_A 47 EAIFRKALEEEVDFLIVHHGLFW-GKPFP---------IVGHHKRRLETLFQGGINLYA 95 (242)
T ss_dssp HHHHHHHHHTTCSEEEEEECSCS-SCCCC---------SCHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHCCCCEEEECCCcCc-Ccccc---------cccHHHHHHHHHHHCCCeEEE
Confidence 45667899999999998886433 32211 123455566666678998875
No 115
>2ei9_A Non-LTR retrotransposon R1BMKS ORF2 protein; four layered alpha beta sandwich, gene regulation; 2.00A {Bombyx mori}
Probab=21.32 E-value=70 Score=26.94 Aligned_cols=37 Identities=8% Similarity=0.243 Sum_probs=21.8
Q ss_pred ccEEEEEEecCcCCHHHHHHHHHHHHHHHHHCCCeEEEeCCCC
Q 019580 61 SVRVAVAQMTSINDLAANFATSSRLVKEAASAGAKLLCLPENF 103 (339)
Q Consensus 61 ~~rVA~vQ~~~~~d~~~n~~~~~~~i~~A~~~gadlIVfPE~~ 103 (339)
.|||+-.+.+ +-. ...+++.++++ +.++|+|++.|..
T Consensus 7 ~mki~s~Nvn--~~r-~~~~~l~~~l~---~~~~DIl~LQEt~ 43 (240)
T 2ei9_A 7 RLRIGQINLG--GAE-DATRELPSIAR---DLGLDIVLVQEQY 43 (240)
T ss_dssp EEEEEEEECT--TCH-HHHHTHHHHHH---HHTCSEEEEESCC
T ss_pred cceEEEEecC--ccH-HHHHHHHHHHH---HcCCCEEEeecce
Confidence 4666555544 222 22344444444 4689999999974
No 116
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=21.27 E-value=1e+02 Score=27.76 Aligned_cols=19 Identities=11% Similarity=0.064 Sum_probs=16.2
Q ss_pred hHHHHHHHHHHhcCcEEEE
Q 019580 123 PIMQGYCSLARESRVWLSL 141 (339)
Q Consensus 123 ~~~~~l~~~A~~~~i~iv~ 141 (339)
+.++.+.++|+++++.+++
T Consensus 194 ~~l~~i~~~a~~~~~~li~ 212 (406)
T 1xi9_A 194 KTLEEILNIAGEYEIPVIS 212 (406)
T ss_dssp HHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHHcCCEEEE
Confidence 4678899999999998875
No 117
>3nxk_A Cytoplasmic L-asparaginase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; 2.40A {Campylobacter jejuni subsp}
Probab=21.15 E-value=2.8e+02 Score=24.80 Aligned_cols=65 Identities=8% Similarity=0.014 Sum_probs=46.8
Q ss_pred CcceEEEeeccC-cchHHHHHHHhcCCceEEEEeCCCCCCCcHHHHHHHHHHHHHhcCcEEEEECCccC
Q 019580 206 VGRLGPTVCYDL-RFPELYQQLRFQHEAQVLLVPSAFTKVTGQAHWEILLRARAIETQCYVIAAAQAGK 273 (339)
Q Consensus 206 ~~kigv~IC~D~-~~pe~~r~~~~~~gadlll~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~an~~G~ 273 (339)
..++.++-+|-- .-+++.+.+. ..|++=|+.-+...... .. +..-...+|.+.|++|+.++++..
T Consensus 220 ~~~V~il~~~pG~~~~~~l~a~~-~~g~~GiVle~~G~Gn~-p~-~~~~~l~~a~~~Gi~VV~~Src~~ 285 (334)
T 3nxk_A 220 LPKVDILYSYSNDGSGVAAKALF-EHGTKGIVVAGSGAGSI-HK-NQKDVLKELLKKGLKVVVSSRVVA 285 (334)
T ss_dssp CCCEEEEECCTTCCHHHHHHHHH-HTTCCEEEEEEBTTTBC-CH-HHHHHHHHHHTTTCEEEEEESSSB
T ss_pred CCcEEEEEEeCCCCCHHHHHHHH-hCCCCEEEEeeECCCCC-cH-HHHHHHHHHHHCCCEEEEeCCCCC
Confidence 457999999988 8899998887 68898888764322111 12 233355678899999999998864
No 118
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=21.06 E-value=85 Score=26.72 Aligned_cols=37 Identities=19% Similarity=0.118 Sum_probs=27.0
Q ss_pred HHHHHHHCCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEEEee
Q 019580 85 LVKEAASAGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLSLGG 143 (339)
Q Consensus 85 ~i~~A~~~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~Gs 143 (339)
.++.|.+.|+|+||.|-.. ..+.+.++++++.++.|.
T Consensus 98 ~a~~Ai~AGA~fIvsP~~~----------------------~~vi~~~~~~gi~~ipGv 134 (232)
T 4e38_A 98 QALAAKEAGATFVVSPGFN----------------------PNTVRACQEIGIDIVPGV 134 (232)
T ss_dssp HHHHHHHHTCSEEECSSCC----------------------HHHHHHHHHHTCEEECEE
T ss_pred HHHHHHHcCCCEEEeCCCC----------------------HHHHHHHHHcCCCEEcCC
Confidence 4566777799999988631 235667888899998884
No 119
>2pcj_A ABC transporter, lipoprotein-releasing system ATP-binding protein; structural genomics; 1.70A {Aquifex aeolicus} PDB: 2pcl_A
Probab=21.05 E-value=1e+02 Score=25.70 Aligned_cols=68 Identities=12% Similarity=0.132 Sum_probs=39.6
Q ss_pred HHHHHHCCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEEEeeeeeecCCCCceEEEEEEEcCCC
Q 019580 86 VKEAASAGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLSLGGFQEKGSDDAHLCNTHVLVDDAG 165 (339)
Q Consensus 86 i~~A~~~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~Gs~~e~~~~~~~~yNsa~li~p~G 165 (339)
+..|...+++++++=|.+ .+...... ....+.+.+++++ +..|++-+ +... .- .+.+..+++. +|
T Consensus 151 laral~~~p~lllLDEPt--~~LD~~~~--------~~~~~~l~~l~~~-g~tvi~vt-Hd~~-~~-~~~d~v~~l~-~G 215 (224)
T 2pcj_A 151 IARALANEPILLFADEPT--GNLDSANT--------KRVMDIFLKINEG-GTSIVMVT-HERE-LA-ELTHRTLEMK-DG 215 (224)
T ss_dssp HHHHTTTCCSEEEEESTT--TTCCHHHH--------HHHHHHHHHHHHT-TCEEEEEC-SCHH-HH-TTSSEEEEEE-TT
T ss_pred HHHHHHcCCCEEEEeCCC--CCCCHHHH--------HHHHHHHHHHHHC-CCEEEEEc-CCHH-HH-HhCCEEEEEE-CC
Confidence 344555688999999963 44443221 1356677788766 77676543 2221 11 3455666776 78
Q ss_pred cee
Q 019580 166 NIR 168 (339)
Q Consensus 166 ~v~ 168 (339)
+++
T Consensus 216 ~i~ 218 (224)
T 2pcj_A 216 KVV 218 (224)
T ss_dssp EEE
T ss_pred EEE
Confidence 764
No 120
>1oxx_K GLCV, glucose, ABC transporter, ATP binding protein; ABC-ATPase, ATP-binding cassette, ATPase, transport protein; 1.45A {Sulfolobus solfataricus} SCOP: b.40.6.3 c.37.1.12 PDB: 1oxs_C 1oxt_A 1oxu_A* 1oxv_A*
Probab=20.90 E-value=1e+02 Score=27.83 Aligned_cols=73 Identities=14% Similarity=0.053 Sum_probs=45.2
Q ss_pred HHHHHHHCCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEEEeeeeeecCCCCceEEEEEEEcCC
Q 019580 85 LVKEAASAGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLSLGGFQEKGSDDAHLCNTHVLVDDA 164 (339)
Q Consensus 85 ~i~~A~~~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~Gs~~e~~~~~~~~yNsa~li~p~ 164 (339)
.+.+|...+++++++=|.+ .+..... .....+.|+++.++.++.+++-+ +... +-..+.+..++++ +
T Consensus 150 alAraL~~~P~lLLLDEP~--s~LD~~~--------r~~l~~~l~~l~~~~g~tvi~vT-Hd~~-~~~~~adri~vl~-~ 216 (353)
T 1oxx_K 150 ALARALVKDPSLLLLDEPF--SNLDARM--------RDSARALVKEVQSRLGVTLLVVS-HDPA-DIFAIADRVGVLV-K 216 (353)
T ss_dssp HHHHHHTTCCSEEEEESTT--TTSCGGG--------HHHHHHHHHHHHHHHCCEEEEEE-SCHH-HHHHHCSEEEEEE-T
T ss_pred HHHHHHHhCCCEEEEECCc--ccCCHHH--------HHHHHHHHHHHHHhcCCEEEEEe-CCHH-HHHHhCCEEEEEE-C
Confidence 3456667789999999964 4444322 11366778888888788777642 2221 1123456677776 8
Q ss_pred Cceeee
Q 019580 165 GNIRST 170 (339)
Q Consensus 165 G~v~~~ 170 (339)
|+++..
T Consensus 217 G~i~~~ 222 (353)
T 1oxx_K 217 GKLVQV 222 (353)
T ss_dssp TEEEEE
T ss_pred CEEEEE
Confidence 988643
No 121
>2w0m_A SSO2452; RECA, SSPF, unknown FUN; 2.0A {Sulfolobus solfataricus P2}
Probab=20.89 E-value=1.8e+02 Score=23.40 Aligned_cols=44 Identities=11% Similarity=-0.080 Sum_probs=29.5
Q ss_pred HCCCe--EEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEEEe
Q 019580 91 SAGAK--LLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLSLG 142 (339)
Q Consensus 91 ~~gad--lIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~G 142 (339)
..+++ +||+=|.....+..... ....++.+.+++++.++.|++-
T Consensus 119 ~~~~~~~llilDe~~~~~~~d~~~--------~~~~~~~l~~~~~~~~~~vi~~ 164 (235)
T 2w0m_A 119 KLGYGKARLVIDSVSALFLDKPAM--------ARKISYYLKRVLNKWNFTIYAT 164 (235)
T ss_dssp HHCSSCEEEEEETGGGGSSSCGGG--------HHHHHHHHHHHHHHTTEEEEEE
T ss_pred hhCCCceEEEEECchHhhcCCHHH--------HHHHHHHHHHHHHhCCCeEEEE
Confidence 34799 99999975332212111 1247788899999999888764
No 122
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=20.86 E-value=1.1e+02 Score=26.83 Aligned_cols=41 Identities=17% Similarity=0.131 Sum_probs=26.4
Q ss_pred CCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEEEe
Q 019580 92 AGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLSLG 142 (339)
Q Consensus 92 ~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~G 142 (339)
.++++|++++....+|...+ .+.++.+.++|+++++.+++=
T Consensus 145 ~~~~~v~i~~p~nptG~~~~----------~~~l~~i~~~~~~~~~~li~D 185 (364)
T 1lc5_A 145 PDLDCLFLCTPNNPTGLLPE----------RPLLQAIADRCKSLNINLILD 185 (364)
T ss_dssp TTCCEEEEESSCTTTCCCCC----------HHHHHHHHHHHHHHTCEEEEE
T ss_pred CCCCEEEEeCCCCCCCCCCC----------HHHHHHHHHHhhhcCcEEEEE
Confidence 45666666554333443322 246788999999999988753
No 123
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=20.80 E-value=1.5e+02 Score=26.32 Aligned_cols=40 Identities=8% Similarity=0.031 Sum_probs=26.5
Q ss_pred CCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEEE
Q 019580 92 AGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLSL 141 (339)
Q Consensus 92 ~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~ 141 (339)
.++.+|+++=....+|...+ .+.++.+.++|+++++.++.
T Consensus 174 ~~~~~v~i~~p~NPtG~~~~----------~~~l~~i~~~~~~~~~~li~ 213 (401)
T 7aat_A 174 EKSIILLHACAHNPTGVDPR----------QEQWKELASVVKKRNLLAYF 213 (401)
T ss_dssp TTCEEEEESSSCTTTCCCCC----------HHHHHHHHHHHHHTTCEEEE
T ss_pred CCcEEEEeCCCCCCCCCCCC----------HHHHHHHHHHHHhCCcEEEE
Confidence 45677777654334454322 24678899999999998875
No 124
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=20.64 E-value=1.3e+02 Score=26.66 Aligned_cols=20 Identities=15% Similarity=0.331 Sum_probs=16.6
Q ss_pred hHHHHHHHHHHhcCcEEEEe
Q 019580 123 PIMQGYCSLARESRVWLSLG 142 (339)
Q Consensus 123 ~~~~~l~~~A~~~~i~iv~G 142 (339)
+.++.+.++|+++++.+++=
T Consensus 183 ~~l~~i~~~~~~~~~~li~D 202 (388)
T 1j32_A 183 DEVRAIAQVAVEAGLWVLSD 202 (388)
T ss_dssp HHHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHHHcCCEEEEE
Confidence 46788999999999988753
No 125
>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A
Probab=20.59 E-value=1.2e+02 Score=25.22 Aligned_cols=54 Identities=9% Similarity=0.059 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHH---HC--CCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEEEee
Q 019580 79 FATSSRLVKEAA---SA--GAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLSLGG 143 (339)
Q Consensus 79 ~~~~~~~i~~A~---~~--gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~Gs 143 (339)
...+.++++... +. ++|+||+-=-.. ...+.. .+.++.+.++.+..++++|.|.
T Consensus 14 ~~~l~~~l~~~~~~~~~~~~~d~ii~~GD~~--~~g~~~---------~~~~~~l~~l~~~~~~~~v~GN 72 (252)
T 1nnw_A 14 LPALTAALSRIEEMREEGYEIEKYYILGNIV--GLFPYP---------KEVIEVIKDLTKKENVKIIRGK 72 (252)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEEEESCSS--SSSSCH---------HHHHHHHHHHHHHSCEEEECCH
T ss_pred HHHHHHHHHHHHhhhhccCCCCEEEEeCccC--CCCCCH---------HHHHHHHHhhHhhcCeeEEecc
Confidence 334444444444 55 789887765431 211111 1356677777765788888873
No 126
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=20.59 E-value=1.3e+02 Score=27.26 Aligned_cols=19 Identities=11% Similarity=0.048 Sum_probs=16.4
Q ss_pred hHHHHHHHHHHhcCcEEEE
Q 019580 123 PIMQGYCSLARESRVWLSL 141 (339)
Q Consensus 123 ~~~~~l~~~A~~~~i~iv~ 141 (339)
+.++.+.++|+++++.+++
T Consensus 202 ~~l~~i~~~~~~~~~~li~ 220 (429)
T 1yiz_A 202 AELEVVANLCKKWNVLCVS 220 (429)
T ss_dssp HHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHcCcEEEE
Confidence 4678899999999998875
No 127
>4hs4_A Chromate reductase; triple-layered, A/B/A structure, NAD(P)H-dependent FMN reduc oxidoreductase; HET: FMN; 2.10A {Gluconacetobacter hansenii} PDB: 3s2y_A* 4h6p_A*
Probab=20.59 E-value=2.5e+02 Score=22.80 Aligned_cols=78 Identities=12% Similarity=0.017 Sum_probs=38.7
Q ss_pred cCcccEEEEEEecCcCCHHHHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCc
Q 019580 58 GASSVRVAVAQMTSINDLAANFATSSRLVKEAASAGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRV 137 (339)
Q Consensus 58 ~~~~~rVA~vQ~~~~~d~~~n~~~~~~~i~~A~~~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i 137 (339)
+|.+|||.++...+..+ .+..++.+.+.+...+|+++-++=++.-++.+.. +.. .... .+..+.+.+..++.+.
T Consensus 3 ~M~~mkIl~I~GS~r~~--s~t~~la~~~~~~~~~g~~v~~~idL~~lP~~~~-~~~--~~~~-~~~~~~~~~~i~~AD~ 76 (199)
T 4hs4_A 3 TTSPLHFVTLLGSLRKA--SFNAAVARALPEIAPEGIAITPLGSIGTFPHYSQ-DVQ--EEGF-PAPVLTMAQQIATADA 76 (199)
T ss_dssp --CCEEEEEEECCCSTT--CHHHHHHHHHHHHCCTTEEEEECCCGGGSCCCCH-HHH--HHCC-CHHHHHHHHHHHHSSE
T ss_pred CCCCCEEEEEEcCCCCC--ChHHHHHHHHHHHccCCCEEEEEEehhhcCCCCc-ccc--ccCC-CHHHHHHHHHHHhCCE
Confidence 34679999999887532 3444455555444445666552222211222221 111 1112 2445666666677777
Q ss_pred EEEE
Q 019580 138 WLSL 141 (339)
Q Consensus 138 ~iv~ 141 (339)
.|++
T Consensus 77 iVi~ 80 (199)
T 4hs4_A 77 VVIV 80 (199)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6653
No 128
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=20.49 E-value=1e+02 Score=27.43 Aligned_cols=19 Identities=21% Similarity=0.361 Sum_probs=16.1
Q ss_pred hHHHHHHHHHHhcCcEEEE
Q 019580 123 PIMQGYCSLARESRVWLSL 141 (339)
Q Consensus 123 ~~~~~l~~~A~~~~i~iv~ 141 (339)
+.++.|.++|+++++.++.
T Consensus 184 ~~l~~i~~~~~~~~~~li~ 202 (385)
T 1b5p_A 184 EVLEALARLAVEHDFYLVS 202 (385)
T ss_dssp HHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHcCCEEEE
Confidence 4678899999999998875
No 129
>2olj_A Amino acid ABC transporter; ABC domain, ATPase, hydrolase; HET: ADP; 2.05A {Geobacillus stearothermophilus} PDB: 2olk_A* 2ouk_A 2q0h_A* 3c4j_A* 3c41_J*
Probab=20.24 E-value=86 Score=27.01 Aligned_cols=70 Identities=17% Similarity=0.187 Sum_probs=41.8
Q ss_pred HHHHHHCCCeEEEeCCCCCCCCCCCcchhhhhccCCchHHHHHHHHHHhcCcEEEEeeeeeecCCCCceEEEEEEEcCCC
Q 019580 86 VKEAASAGAKLLCLPENFSYVGDKDGDSLKVAETLDGPIMQGYCSLARESRVWLSLGGFQEKGSDDAHLCNTHVLVDDAG 165 (339)
Q Consensus 86 i~~A~~~gadlIVfPE~~~~~g~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~Gs~~e~~~~~~~~yNsa~li~p~G 165 (339)
+..|...+++++++=|.+ .+..+... ....+.+.+++++ +..|++-+ +... .-..+.+..++++ +|
T Consensus 170 lAraL~~~p~lllLDEPt--s~LD~~~~--------~~~~~~l~~l~~~-g~tvi~vt-Hd~~-~~~~~~d~v~~l~-~G 235 (263)
T 2olj_A 170 IARALAMEPKIMLFDEPT--SALDPEMV--------GEVLSVMKQLANE-GMTMVVVT-HEMG-FAREVGDRVLFMD-GG 235 (263)
T ss_dssp HHHHHTTCCSEEEEESTT--TTSCHHHH--------HHHHHHHHHHHHT-TCEEEEEC-SCHH-HHHHHCSEEEEEE-TT
T ss_pred HHHHHHCCCCEEEEeCCc--ccCCHHHH--------HHHHHHHHHHHhC-CCEEEEEc-CCHH-HHHHhCCEEEEEE-CC
Confidence 445666789999999963 45443221 1356677787766 77776532 2211 1113456677776 88
Q ss_pred ceee
Q 019580 166 NIRS 169 (339)
Q Consensus 166 ~v~~ 169 (339)
+++.
T Consensus 236 ~i~~ 239 (263)
T 2olj_A 236 YIIE 239 (263)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8754
Done!