Query 019585
Match_columns 338
No_of_seqs 182 out of 1378
Neff 6.2
Searched_HMMs 46136
Date Fri Mar 29 02:56:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019585.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019585hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03030 cationic peroxidase; 100.0 6E-110 1E-114 800.5 26.3 315 11-338 5-324 (324)
2 cd00693 secretory_peroxidase H 100.0 7E-102 1E-106 742.2 26.0 298 30-337 1-298 (298)
3 PF00141 peroxidase: Peroxidas 100.0 1.7E-72 3.7E-77 522.2 7.9 228 47-302 1-230 (230)
4 PLN02608 L-ascorbate peroxidas 100.0 9.7E-70 2.1E-74 515.3 18.8 231 43-334 14-256 (289)
5 cd00691 ascorbate_peroxidase A 100.0 1.5E-66 3.3E-71 487.9 16.0 231 42-324 11-252 (253)
6 PLN02364 L-ascorbate peroxidas 100.0 1.9E-65 4.2E-70 479.1 18.1 231 33-323 3-248 (250)
7 cd00692 ligninase Ligninase an 100.0 6.4E-64 1.4E-68 483.3 18.8 236 43-338 16-287 (328)
8 PLN02879 L-ascorbate peroxidas 100.0 9.7E-63 2.1E-67 460.3 18.4 220 45-324 18-249 (251)
9 cd00314 plant_peroxidase_like 100.0 6.2E-59 1.3E-63 436.9 14.6 223 46-319 2-255 (255)
10 cd00649 catalase_peroxidase_1 100.0 1.2E-54 2.6E-59 425.4 19.3 259 45-328 45-401 (409)
11 TIGR00198 cat_per_HPI catalase 100.0 8.7E-53 1.9E-57 435.5 20.2 260 45-326 55-406 (716)
12 PRK15061 catalase/hydroperoxid 100.0 1.1E-48 2.4E-53 403.0 19.5 259 45-328 57-414 (726)
13 cd08201 plant_peroxidase_like_ 100.0 1E-49 2.2E-54 372.7 9.7 214 52-319 32-264 (264)
14 cd08200 catalase_peroxidase_2 100.0 1.2E-37 2.6E-42 294.8 14.5 221 48-321 16-296 (297)
15 TIGR00198 cat_per_HPI catalase 100.0 5.6E-32 1.2E-36 280.9 16.4 218 47-322 430-710 (716)
16 PRK15061 catalase/hydroperoxid 100.0 6.2E-32 1.3E-36 279.3 14.8 221 49-322 442-722 (726)
17 COG0376 KatG Catalase (peroxid 100.0 5.1E-29 1.1E-33 247.5 17.0 242 60-320 93-415 (730)
18 COG0376 KatG Catalase (peroxid 99.2 2.5E-10 5.5E-15 115.0 12.0 217 49-321 452-725 (730)
19 PTZ00411 transaldolase-like pr 52.3 45 0.00097 33.1 6.8 48 142-189 180-230 (333)
20 PF11895 DUF3415: Domain of un 50.7 14 0.00031 29.1 2.5 18 305-322 2-19 (80)
21 COG3763 Uncharacterized protei 41.7 24 0.00052 27.1 2.4 28 46-73 24-51 (71)
22 PF07172 GRP: Glycine rich pro 29.6 31 0.00067 28.0 1.4 20 12-31 9-28 (95)
23 COG5661 Predicted secreted Zn- 28.6 36 0.00078 31.2 1.8 44 1-44 1-45 (210)
24 PLN02161 beta-amylase 23.4 98 0.0021 32.6 4.0 34 295-332 234-272 (531)
25 PF15656 Tox-HDC: Toxin with a 22.3 99 0.0021 26.2 3.2 23 176-199 15-39 (119)
26 KOG0400 40S ribosomal protein 21.7 67 0.0014 27.8 2.0 33 173-205 31-64 (151)
27 PLN00017 photosystem I reactio 21.3 55 0.0012 26.1 1.3 21 298-318 37-57 (90)
28 PHA03156 hypothetical protein; 20.7 1.1E+02 0.0023 24.7 2.8 10 32-41 36-45 (90)
29 PF15312 JSRP: Junctional sarc 20.4 74 0.0016 24.2 1.8 19 5-23 10-28 (65)
No 1
>PLN03030 cationic peroxidase; Provisional
Probab=100.00 E-value=5.7e-110 Score=800.47 Aligned_cols=315 Identities=44% Similarity=0.759 Sum_probs=290.7
Q ss_pred HHHHHHHHHhhccccccccccCcCccccCCccHHHHHHHHHHHHHHcCCCccchhhhhhcccccCCCCCceEEcccCCCC
Q 019585 11 IMCILILVSTMPLGTSANAKLKVGFYKSTCPSAESIVRKAVNKAVSCNPGIAAGLIRMHFHDCFVRGCDASVLLETIPGN 90 (338)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~L~~~fY~~sCP~~e~iV~~~v~~~~~~d~~~a~~llRL~FHDcfv~GCDaSiLld~~~~~ 90 (338)
|+.+++|++.++....+.++|+++||++|||++|+||++.|++++.+||+++|++|||+||||||+||||||||+++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~L~~~fY~~sCP~aE~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDaSvLl~~~--- 81 (324)
T PLN03030 5 IVILFFLLAMMATTLVQGQGTRVGFYSTTCPQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCFVRGCDASILIDGS--- 81 (324)
T ss_pred hhHHHHHHHHHhcccchhccCccchhhCcCCCHHHHHHHHHHHHHhhCcccchhhhhhhhhhheecCCceEEeeCCC---
Confidence 33333344444444445578999999999999999999999999999999999999999999999999999999964
Q ss_pred CCCcCCCCCCCCCCccHHHHHHHHHHHHhhCCCCCChhhHHhhhccccccccCCccccccCCCcCCCCCcchhhhccCCC
Q 019585 91 PPSERDDHVNNPSLRGFEVIDEAKAQIEAVCPNTVSCADILTFAARDSTSKVGGINYAVPAGRRDGRVSLSNEIAENLPS 170 (338)
Q Consensus 91 ~~~Ek~~~~N~~~lrg~~~Id~iK~~le~~cp~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~~~a~~~lP~ 170 (338)
..||++++|. +||||++|++||++||+.||++|||||||||||||||+++|||.|+|++||||+++|.+.++. +||+
T Consensus 82 -~~Ek~a~~N~-~l~Gf~~i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~-~LP~ 158 (324)
T PLN03030 82 -NTEKTALPNL-LLRGYDVIDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDAS-NLPG 158 (324)
T ss_pred -cccccCCCCc-CcchHHHHHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCccccc-CCcC
Confidence 4799999999 999999999999999999999999999999999999999999999999999999999877764 8999
Q ss_pred CCCCHHHHHHHHHHcCCCcccceeeecccccccccccCCccccccCCCCC-CCCCCCCHHHHHHhhccCCCCCCCCCCCC
Q 019585 171 PTFNAEQLAARFARKGISVDEMVTLVGAHSIGVSHCSSFSKRLYAFNTTH-PQDPSMDHRFANFLKNKCPPPPPTDGLGC 249 (338)
Q Consensus 171 p~~~~~~l~~~F~~~Gl~~~elVaLsGaHTiG~ahc~~f~~Rl~nf~g~~-~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~ 249 (338)
|+.++++|++.|+++||+.+|||+||||||||++||.+|.+|||||+|++ .+||+||+.|+..|++.||...+
T Consensus 159 p~~~~~~l~~~F~~~Gl~~~DlVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp~~~~------ 232 (324)
T PLN03030 159 FTDSIDVQKQKFAAKGLNTQDLVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQALCPQNGD------ 232 (324)
T ss_pred CCCCHHHHHHHHHHcCCCHHHheeeeeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhccCCCCCC------
Confidence 99999999999999999999999999999999999999999999999875 58999999999999999995321
Q ss_pred CCCCCcccCCCCCCccchHHHHHHhcCCccccchhhhccCchhHHHHHhhhcCh----HHHHHHHHHHHHHhhCCCCCCC
Q 019585 250 TRDPTVTQEFVTPNRLDNKYYRELRNHRGLLTSDQTLMDSRLTSKMVLDNERNG----AMWGTKFAKAMVHVGSLDVLTG 325 (338)
Q Consensus 250 ~~~~~~~ld~~Tp~~FDn~Yy~~l~~~~gll~SD~~L~~d~~t~~~V~~~A~d~----~~F~~~Fa~Am~Km~~lgv~tg 325 (338)
.++.+++|+.||.+|||+||+||++++|+|+|||+|+.|++|+++|++||.|+ +.|+++|++||+|||+|+|+||
T Consensus 233 -~~~~~~lD~~Tp~~FDn~Yy~nll~~rGlL~SDq~L~~d~~T~~~V~~~A~~~~~~~~~F~~~Fa~AmvKMg~i~VlTG 311 (324)
T PLN03030 233 -GSRRIALDTGSSNRFDASFFSNLKNGRGILESDQKLWTDASTRTFVQRFLGVRGLAGLNFNVEFGRSMVKMSNIGVKTG 311 (324)
T ss_pred -CCccccCCCCCCcccccHHHHHHHhcCCCcCCchHhhcCccHHHHHHHHhcccccchhhhHHHHHHHHHHHccCCCCCC
Confidence 23367899999999999999999999999999999999999999999999875 5999999999999999999999
Q ss_pred CCCcccccCccCC
Q 019585 326 SQGEIRKHCSFVN 338 (338)
Q Consensus 326 ~~GeiR~~C~~~n 338 (338)
.+|||||+|+++|
T Consensus 312 ~~GEIRk~C~~vN 324 (324)
T PLN03030 312 TNGEIRKVCSAIN 324 (324)
T ss_pred CCCceeccccccC
Confidence 9999999999998
No 2
>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=6.7e-102 Score=742.24 Aligned_cols=298 Identities=54% Similarity=0.894 Sum_probs=286.6
Q ss_pred ccCcCccccCCccHHHHHHHHHHHHHHcCCCccchhhhhhcccccCCCCCceEEcccCCCCCCCcCCCCCCCCCCccHHH
Q 019585 30 KLKVGFYKSTCPSAESIVRKAVNKAVSCNPGIAAGLIRMHFHDCFVRGCDASVLLETIPGNPPSERDDHVNNPSLRGFEV 109 (338)
Q Consensus 30 ~L~~~fY~~sCP~~e~iV~~~v~~~~~~d~~~a~~llRL~FHDcfv~GCDaSiLld~~~~~~~~Ek~~~~N~~~lrg~~~ 109 (338)
||+++||++|||++|+||++.|++.+.++++++|++|||+||||||+||||||||+++++. .+|+++++|. +|+||++
T Consensus 1 ~L~~~~Y~~sCP~~e~iV~~~v~~~~~~~~~~a~~~lRl~FHDc~v~GcDaSill~~~~~~-~~E~~~~~N~-~l~g~~~ 78 (298)
T cd00693 1 QLSVGFYSKSCPNAESIVRSVVRAAVKADPRLAAALLRLHFHDCFVRGCDASVLLDSTANN-TSEKDAPPNL-SLRGFDV 78 (298)
T ss_pred CCCcccccCCCCChHHHHHHHHHHHHHhCCCcCchhhhhhhHhhhccCcceeEEecCCCCC-chhccCCCCC-CcchhHH
Confidence 5999999999999999999999999999999999999999999999999999999987655 6899999999 9999999
Q ss_pred HHHHHHHHHhhCCCCCChhhHHhhhccccccccCCccccccCCCcCCCCCcchhhhccCCCCCCCHHHHHHHHHHcCCCc
Q 019585 110 IDEAKAQIEAVCPNTVSCADILTFAARDSTSKVGGINYAVPAGRRDGRVSLSNEIAENLPSPTFNAEQLAARFARKGISV 189 (338)
Q Consensus 110 Id~iK~~le~~cp~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~~~a~~~lP~p~~~~~~l~~~F~~~Gl~~ 189 (338)
|++||++||+.||++||||||||||||+||+++|||.|+|++||+|+.+|.+..+ +.||.|+.+++++++.|+++||++
T Consensus 79 i~~iK~~~e~~cp~~VScADiialAar~av~~~GGP~~~v~~GR~D~~~s~~~~~-~~lP~p~~~~~~l~~~F~~~G~~~ 157 (298)
T cd00693 79 IDDIKAALEAACPGVVSCADILALAARDAVVLAGGPSYEVPLGRRDGRVSSANDV-GNLPSPFFSVSQLISLFASKGLTV 157 (298)
T ss_pred HHHHHHHHHhhCCCcccHHHHHHHhhhhceeccCCCcccccCCCcCCcccCcccc-cCCCCcccCHHHHHHHHHHcCCCH
Confidence 9999999999999999999999999999999999999999999999998877665 789999999999999999999999
Q ss_pred ccceeeecccccccccccCCccccccCCCCCCCCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCcccCCCCCCccchHH
Q 019585 190 DEMVTLVGAHSIGVSHCSSFSKRLYAFNTTHPQDPSMDHRFANFLKNKCPPPPPTDGLGCTRDPTVTQEFVTPNRLDNKY 269 (338)
Q Consensus 190 ~elVaLsGaHTiG~ahc~~f~~Rl~nf~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~~~~ld~~Tp~~FDn~Y 269 (338)
+|||||+||||||++||.+|.+|||||+|++.+||+||+.|+..|++.||.... ++..+++|+.||.+|||+|
T Consensus 158 ~d~VaL~GaHTiG~~hc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~~~~-------~~~~~~lD~~Tp~~FDn~Y 230 (298)
T cd00693 158 TDLVALSGAHTIGRAHCSSFSDRLYNFSGTGDPDPTLDPAYAAQLRKKCPAGGD-------DDTLVPLDPGTPNTFDNSY 230 (298)
T ss_pred HHheeecccceeeeeecccccccccCCCCCCCCCCCccHHHHHHhcCCCCCCCC-------CCccccCCCCCCCccccHH
Confidence 999999999999999999999999999999889999999999999999996532 3457889999999999999
Q ss_pred HHHHhcCCccccchhhhccCchhHHHHHhhhcChHHHHHHHHHHHHHhhCCCCCCCCCCcccccCccC
Q 019585 270 YRELRNHRGLLTSDQTLMDSRLTSKMVLDNERNGAMWGTKFAKAMVHVGSLDVLTGSQGEIRKHCSFV 337 (338)
Q Consensus 270 y~~l~~~~gll~SD~~L~~d~~t~~~V~~~A~d~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~~ 337 (338)
|++++.++|+|+|||+|+.|++|+++|++||.||+.|+++|++||+||++|+|+||.+||||++|+++
T Consensus 231 y~~l~~~~glL~SD~~L~~d~~t~~~V~~~A~d~~~F~~~Fa~Am~Kl~~l~v~tg~~GeiR~~C~~~ 298 (298)
T cd00693 231 YKNLLAGRGLLTSDQALLSDPRTRAIVNRYAANQDAFFRDFAAAMVKMGNIGVLTGSQGEIRKNCRVV 298 (298)
T ss_pred HHHHHhcccCccCCHHhccCccHHHHHHHHhhCHHHHHHHHHHHHHHHhhcCCccCCCCccCCccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999975
No 3
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Most haem peroxidases follow the reaction scheme: Fe3+ + H2O2 --> [Fe4+=O]R' (Compound I) + H2O [Fe4+=O]R' + substrate --> [Fe4+=O]R (Compound II) + oxidised substrate [Fe4+=O]R + substrate --> Fe3+ + H2O + oxidised substrate In this mechanism, the enzyme reacts with one equivalent of H2O2 to give [Fe4+=O]R' (compound I). This is a two-electron oxidation/reduction reaction where H2O2 is reduced to water and the enzyme is oxidised. One oxidising equivalent resides on iron, giving the oxyferryl [] intermediate, while in many peroxidases the porphyrin (R) is oxidised to the porphyrin pi-cation radical (R'). Compound I then oxidises an organic substrate to give a substrate radical []. Haem peroxidases include two superfamilies: one found in bacteria, fungi, plants and the second found in animals. The first one can be viewed as consisting of 3 major classes []. Class I, the intracellular peroxidases, includes: yeast cytochrome c peroxidase (CCP), a soluble protein found in the mitochondrial electron transport chain, where it probably protects against toxic peroxides; ascorbate peroxidase (AP), the main enzyme responsible for hydrogen peroxide removal in chloroplasts and cytosol of higher plants; and bacterial catalase- peroxidases, exhibiting both peroxidase and catalase activities. It is thought that catalase-peroxidase provides protection to cells under oxidative stress []. Class II consists of secretory fungal peroxidases: ligninases, or lignin peroxidases (LiPs), and manganese-dependent peroxidases (MnPs). These are monomeric glycoproteins involved in the degradation of lignin. In MnP, Mn2+ serves as the reducing substrate []. Class II proteins contain four conserved disulphide bridges and two conserved calcium-binding sites. Class III consists of the secretory plant peroxidases, which have multiple tissue-specific functions: e.g., removal of hydrogen peroxide from chloroplasts and cytosol; oxidation of toxic compounds; biosynthesis of the cell wall; defence responses towards wounding; indole-3-acetic acid (IAA) catabolism; ethylene biosynthesis; and so on. Class III proteins are also monomeric glycoproteins, containing four conserved disulphide bridges and two calcium ions, although the placement of the disulphides differs from class II enzymes. The crystal structures of a number of these proteins show that they share the same architecture - two all-alpha domains between which the haem group is embedded. ; GO: 0004601 peroxidase activity, 0020037 heme binding, 0006979 response to oxidative stress, 0055114 oxidation-reduction process; PDB: 1QPA_B 2DV2_A 2B2R_B 1MWV_B 2FXJ_A 2FXG_A 2B2O_B 1X7U_B 2B2Q_A 2FXH_A ....
Probab=100.00 E-value=1.7e-72 Score=522.21 Aligned_cols=228 Identities=52% Similarity=0.867 Sum_probs=210.2
Q ss_pred HHHHHHHHHHcCCCccchhhhhhcccccC-CCCCceEEcccCCCCCCCcCCCCCCCCCCc-cHHHHHHHHHHHHhhCCCC
Q 019585 47 VRKAVNKAVSCNPGIAAGLIRMHFHDCFV-RGCDASVLLETIPGNPPSERDDHVNNPSLR-GFEVIDEAKAQIEAVCPNT 124 (338)
Q Consensus 47 V~~~v~~~~~~d~~~a~~llRL~FHDcfv-~GCDaSiLld~~~~~~~~Ek~~~~N~~~lr-g~~~Id~iK~~le~~cp~~ 124 (338)
||+.|+++++++++++|++|||+|||||+ +|||||||+. ..|+++++|. +|+ ++++|+.||+++|++||++
T Consensus 1 Vr~~v~~~~~~~~~~~~~~lRl~FHDc~~~~GcDgSil~~------~~e~~~~~N~-gl~~~~~~i~~ik~~~~~~cp~~ 73 (230)
T PF00141_consen 1 VRSDVRAAFKKDPTLAPGLLRLAFHDCFVYGGCDGSILLF------SAEKDAPPNR-GLRDGFDVIDPIKAKLEAACPGV 73 (230)
T ss_dssp HHHHHHHHHHHHTTSHHHHHHHHHHHHTTHTSSSSGGGGS------TTGGGSGGGT-THHHHHHHHHHHHHHHCHHSTTT
T ss_pred CHHHHHHHHHHCcCccHHHHHHHccccccccccccceecc------cccccccccc-CcceeeechhhHHhhhcccccCC
Confidence 79999999999999999999999999999 9999999993 5899999999 998 9999999999999999999
Q ss_pred CChhhHHhhhccccccccCCccccccCCCcCCCCCcchhhhccCCCCCCCHHHHHHHHHHcCCCcccceeeecccccccc
Q 019585 125 VSCADILTFAARDSTSKVGGINYAVPAGRRDGRVSLSNEIAENLPSPTFNAEQLAARFARKGISVDEMVTLVGAHSIGVS 204 (338)
Q Consensus 125 VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~~~a~~~lP~p~~~~~~l~~~F~~~Gl~~~elVaLsGaHTiG~a 204 (338)
|||||||+||||+||+.+|||.|+|++||+|+++++..++ .+||.|+.++++|++.|+++|||++|||||+||||||++
T Consensus 74 VS~ADiialAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~-~~lP~p~~~~~~l~~~F~~~Gls~~e~VaLsGaHTiG~~ 152 (230)
T PF00141_consen 74 VSCADIIALAARDAVELCGGPRIPVPLGRRDGTVSSPSGA-SNLPSPTDSVDQLLAFFARKGLSAEEMVALSGAHTIGRA 152 (230)
T ss_dssp S-HHHHHHHHHHHHHHHTTGGHSHBEB-EBB-SSGGHHHH-HHSSTTTSHHHHHHHHHHHTT--HHHHHHHHGGGGSTEE
T ss_pred CCHHHHHHHHhhhccccccccccccccccccccccccccc-ccccccccccchhhhhhhccccchhhhcceecccccccc
Confidence 9999999999999999999999999999999999999877 789999999999999999999999999999999999999
Q ss_pred cccCCccccccCCCCCCCCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCcccCCCCCCccchHHHHHHhcCCccccchh
Q 019585 205 HCSSFSKRLYAFNTTHPQDPSMDHRFANFLKNKCPPPPPTDGLGCTRDPTVTQEFVTPNRLDNKYYRELRNHRGLLTSDQ 284 (338)
Q Consensus 205 hc~~f~~Rl~nf~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~~~~ld~~Tp~~FDn~Yy~~l~~~~gll~SD~ 284 (338)
||.+|. ||| + .+||+||+.|+.. .| ..+ +++.+++| ||.+|||+||+++++++|+|.|||
T Consensus 153 ~c~~f~-rl~-~----~~dp~~d~~~~~~---~C-~~~--------~~~~~~~d--tp~~fDN~Yy~~ll~~~gll~SD~ 212 (230)
T PF00141_consen 153 HCSSFS-RLY-F----PPDPTMDPGYAGQ---NC-NSG--------GDNGVPLD--TPTVFDNSYYKNLLNGRGLLPSDQ 212 (230)
T ss_dssp SGGCTG-GTS-C----SSGTTSTHHHHHH---SS-STS--------GCTCEESS--STTS-SSHHHHHHHHTEEEEHHHH
T ss_pred eecccc-ccc-c----cccccccccccee---cc-CCC--------cccccccc--CCCcchhHHHHHHhcCCCcCHHHH
Confidence 999999 999 5 4799999999988 99 333 23377888 999999999999999999999999
Q ss_pred hhccCchhHHHHHhhhcC
Q 019585 285 TLMDSRLTSKMVLDNERN 302 (338)
Q Consensus 285 ~L~~d~~t~~~V~~~A~d 302 (338)
+|++|++|+++|++||+|
T Consensus 213 ~L~~d~~t~~~V~~yA~d 230 (230)
T PF00141_consen 213 ALLNDPETRPIVERYAQD 230 (230)
T ss_dssp HHHHSTTHHHHHHHHHHT
T ss_pred HHhcCHHHHHHHHHHhcC
Confidence 999999999999999976
No 4
>PLN02608 L-ascorbate peroxidase
Probab=100.00 E-value=9.7e-70 Score=515.34 Aligned_cols=231 Identities=25% Similarity=0.374 Sum_probs=209.4
Q ss_pred HHHHHHHHHHHHHHcCCCccchhhhhhccccc-------CCCCCceEEcccCCCCCCCcCCCCCCCCCC-ccHHHHHHHH
Q 019585 43 AESIVRKAVNKAVSCNPGIAAGLIRMHFHDCF-------VRGCDASVLLETIPGNPPSERDDHVNNPSL-RGFEVIDEAK 114 (338)
Q Consensus 43 ~e~iV~~~v~~~~~~d~~~a~~llRL~FHDcf-------v~GCDaSiLld~~~~~~~~Ek~~~~N~~~l-rg~~~Id~iK 114 (338)
++ .+++++ ..+.++|+++|.+|||+||||| ++||||||+++ .|+++++|. +| +||++|+.||
T Consensus 14 ~~-~~~~~~-~~~~~d~~~a~~llRLaFHDc~t~d~~~~~gGcDgSIll~-------~E~~~~~N~-gL~~g~~vid~iK 83 (289)
T PLN02608 14 IE-KARRDL-RALIASKNCAPIMLRLAWHDAGTYDAKTKTGGPNGSIRNE-------EEYSHGANN-GLKIAIDLCEPVK 83 (289)
T ss_pred HH-HHHHHH-HHHHHCCCcHHHHHHHhhhhcCCcCCCCCCCCCCeeeecc-------cccCCcccc-chHHHHHHHHHHH
Confidence 44 445666 4477899999999999999999 99999999983 699999999 99 5999999999
Q ss_pred HHHHhhCCCCCChhhHHhhhccccccccCCccccccCCCcCCCCCcchhhhccCCCCCCCHHHHHHHHHHcCCCccccee
Q 019585 115 AQIEAVCPNTVSCADILTFAARDSTSKVGGINYAVPAGRRDGRVSLSNEIAENLPSPTFNAEQLAARFARKGISVDEMVT 194 (338)
Q Consensus 115 ~~le~~cp~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~~~a~~~lP~p~~~~~~l~~~F~~~Gl~~~elVa 194 (338)
+++ ++|||||||+||||+||+++|||.|+|++||+|++++.+ +++||+|+.+++++++.|+++||+++|||+
T Consensus 84 ~~~-----~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~---~~~LP~p~~~~~~l~~~F~~~Gl~~~D~Va 155 (289)
T PLN02608 84 AKH-----PKITYADLYQLAGVVAVEVTGGPTIDFVPGRKDSNACPE---EGRLPDAKKGAKHLRDVFYRMGLSDKDIVA 155 (289)
T ss_pred HHc-----CCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCcCCc---cCCCcCCCCCHHHHHHHHHHcCCCHHHHhh
Confidence 987 489999999999999999999999999999999999863 468999999999999999999999999999
Q ss_pred eecccccccccccCCccccccCCCCCCCCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCcccCCCCCCccchHHHHHHh
Q 019585 195 LVGAHSIGVSHCSSFSKRLYAFNTTHPQDPSMDHRFANFLKNKCPPPPPTDGLGCTRDPTVTQEFVTPNRLDNKYYRELR 274 (338)
Q Consensus 195 LsGaHTiG~ahc~~f~~Rl~nf~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~~~~ld~~Tp~~FDn~Yy~~l~ 274 (338)
|+||||||++||. |+ +|.| ++ +.||.+|||+||++++
T Consensus 156 LsGAHTiG~ahc~----r~-g~~g----------------------------------~~----~~Tp~~FDN~Yy~~ll 192 (289)
T PLN02608 156 LSGGHTLGRAHPE----RS-GFDG----------------------------------PW----TKEPLKFDNSYFVELL 192 (289)
T ss_pred hcccccccccccc----CC-CCCC----------------------------------CC----CCCCCccChHHHHHHH
Confidence 9999999999994 55 3311 01 2689999999999999
Q ss_pred cC--Ccc--ccchhhhccCchhHHHHHhhhcChHHHHHHHHHHHHHhhCCCCCCCCCCcccccC
Q 019585 275 NH--RGL--LTSDQTLMDSRLTSKMVLDNERNGAMWGTKFAKAMVHVGSLDVLTGSQGEIRKHC 334 (338)
Q Consensus 275 ~~--~gl--l~SD~~L~~d~~t~~~V~~~A~d~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C 334 (338)
.+ +|+ |+|||+|+.|++|+++|++||.||+.|+++|++||+||++|+|+||.+||+.+.-
T Consensus 193 ~~~~~gll~L~SD~~L~~d~~T~~~V~~fA~~~~~F~~~Fa~Am~Km~~lgvltg~~Ge~~~~~ 256 (289)
T PLN02608 193 KGESEGLLKLPTDKALLEDPEFRPYVELYAKDEDAFFRDYAESHKKLSELGFTPPSSAFKKKST 256 (289)
T ss_pred cCCcCCccccccCHhhhcChhHHHHHHHHhhCHHHHHHHHHHHHHHHHcCCCCCCCCCcccccC
Confidence 98 788 7999999999999999999999999999999999999999999999999998754
No 5
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water.
Probab=100.00 E-value=1.5e-66 Score=487.91 Aligned_cols=231 Identities=23% Similarity=0.322 Sum_probs=208.4
Q ss_pred cHHHHHHHHHHHHHHcCCCccchhhhhhcccccCCCCCceEEcccCCCC--CCCcCCCCCCCCCC-ccHHHHHHHHHHHH
Q 019585 42 SAESIVRKAVNKAVSCNPGIAAGLIRMHFHDCFVRGCDASVLLETIPGN--PPSERDDHVNNPSL-RGFEVIDEAKAQIE 118 (338)
Q Consensus 42 ~~e~iV~~~v~~~~~~d~~~a~~llRL~FHDcfv~GCDaSiLld~~~~~--~~~Ek~~~~N~~~l-rg~~~Id~iK~~le 118 (338)
..++||++.|++.++ +++++|++|||+||||| +||+|+++++..+. ..+|+++++|. +| +||++|+.||+++
T Consensus 11 ~~~~~V~~~v~~~~~-~~~~~~~llRl~FHDc~--~~d~s~~~~G~d~s~~~~~E~~~~~N~-~L~~~~~~i~~iK~~~- 85 (253)
T cd00691 11 KDLEAARNDIAKLID-DKNCAPILVRLAWHDSG--TYDKETKTGGSNGTIRFDPELNHGANA-GLDIARKLLEPIKKKY- 85 (253)
T ss_pred HHHHHHHHHHHHHHH-cCCcHHHHHHHHHHHHh--ccccccCCCCCCccccchhhcCCcccc-chHHHHHHHHHHHHHc-
Confidence 456799999999999 99999999999999999 48888877543221 03699999999 99 8999999999876
Q ss_pred hhCCCCCChhhHHhhhccccccccCCccccccCCCcCCCCCcchhhhccCCCCCCCHHHHHHHHHHcCCCcccceeeecc
Q 019585 119 AVCPNTVSCADILTFAARDSTSKVGGINYAVPAGRRDGRVSLSNEIAENLPSPTFNAEQLAARFARKGISVDEMVTLVGA 198 (338)
Q Consensus 119 ~~cp~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~~~a~~~lP~p~~~~~~l~~~F~~~Gl~~~elVaLsGa 198 (338)
| +|||||||+||||+||+.+|||.|+|++||+|+.++....++.+||.|+.+++++++.|+++||+++|||+|+||
T Consensus 86 ---~-~VScADilalAar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gls~~d~VaLsGa 161 (253)
T cd00691 86 ---P-DISYADLWQLAGVVAIEEMGGPKIPFRPGRVDASDPEECPPEGRLPDASKGADHLRDVFYRMGFNDQEIVALSGA 161 (253)
T ss_pred ---C-CCCHHHHHHHHHHHHHHHcCCCccCcccCCCCCCcccccCcccCCCCCCCCHHHHHHHHHhcCCCHHHHHHhccc
Confidence 4 899999999999999999999999999999999999877777889999999999999999999999999999999
Q ss_pred cccccccccCCccccccCCCCCCCCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCcccCCCCCCccchHHHHHHhcCCc
Q 019585 199 HSIGVSHCSSFSKRLYAFNTTHPQDPSMDHRFANFLKNKCPPPPPTDGLGCTRDPTVTQEFVTPNRLDNKYYRELRNHRG 278 (338)
Q Consensus 199 HTiG~ahc~~f~~Rl~nf~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~~~~ld~~Tp~~FDn~Yy~~l~~~~g 278 (338)
||||++||.. ++|.|+ |..||.+|||+||++|+.++|
T Consensus 162 HTiG~a~c~~-----~~~~g~--------------------------------------~~~tp~~FDn~Yy~~ll~~~g 198 (253)
T cd00691 162 HTLGRCHKER-----SGYDGP--------------------------------------WTKNPLKFDNSYFKELLEEDW 198 (253)
T ss_pred ceeecccccC-----CCCCCC--------------------------------------CCCCCCcccHHHHHHHhcCCC
Confidence 9999999943 233210 125899999999999999999
Q ss_pred --------cccchhhhccCchhHHHHHhhhcChHHHHHHHHHHHHHhhCCCCCC
Q 019585 279 --------LLTSDQTLMDSRLTSKMVLDNERNGAMWGTKFAKAMVHVGSLDVLT 324 (338)
Q Consensus 279 --------ll~SD~~L~~d~~t~~~V~~~A~d~~~F~~~Fa~Am~Km~~lgv~t 324 (338)
+|+|||+|+.|++|+++|++||.|+++|+++|++||+||++|+|..
T Consensus 199 ~~~~~~~~~L~sD~~L~~d~~t~~~v~~~a~~~~~F~~~Fa~Am~Km~~l~v~~ 252 (253)
T cd00691 199 KLPTPGLLMLPTDKALLEDPKFRPYVELYAKDQDAFFKDYAEAHKKLSELGVPF 252 (253)
T ss_pred ccCcCcceechhhHHHHcCccHHHHHHHHhhCHHHHHHHHHHHHHHHHhcCCCC
Confidence 9999999999999999999999999999999999999999999964
No 6
>PLN02364 L-ascorbate peroxidase 1
Probab=100.00 E-value=1.9e-65 Score=479.05 Aligned_cols=231 Identities=25% Similarity=0.403 Sum_probs=207.6
Q ss_pred cCccccC--CccHHHHHHHHHHHHHHcCCCccchhhhhhcc-----cccCC--CCCceEEcccCCCCCCCcCCCCCCCCC
Q 019585 33 VGFYKST--CPSAESIVRKAVNKAVSCNPGIAAGLIRMHFH-----DCFVR--GCDASVLLETIPGNPPSERDDHVNNPS 103 (338)
Q Consensus 33 ~~fY~~s--CP~~e~iV~~~v~~~~~~d~~~a~~llRL~FH-----Dcfv~--GCDaSiLld~~~~~~~~Ek~~~~N~~~ 103 (338)
.+||... |+.+++.++..+++.+ .+++++|.+|||+|| ||+++ ||||||.. .+|+++++|. +
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~a~~~lRl~FHd~~t~dc~~~~GG~dgSi~~-------~~E~~~~~N~-g 73 (250)
T PLN02364 3 KNYPTVSEDYKKAVEKCRRKLRGLI-AEKNCAPIMVRLAWHSAGTFDCQSRTGGPFGTMRF-------DAEQAHGANS-G 73 (250)
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHH-hCCCcHHHHHHHHHccccCcCcCCCCCCCCccccc-------cccccCCCcc-C
Confidence 3566644 8889999999999987 788999999999999 88887 99999944 4799999999 9
Q ss_pred C-ccHHHHHHHHHHHHhhCCCCCChhhHHhhhccccccccCCccccccCCCcCCCCCcchhhhccCCCCCCCHHHHHHHH
Q 019585 104 L-RGFEVIDEAKAQIEAVCPNTVSCADILTFAARDSTSKVGGINYAVPAGRRDGRVSLSNEIAENLPSPTFNAEQLAARF 182 (338)
Q Consensus 104 l-rg~~~Id~iK~~le~~cp~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~~~a~~~lP~p~~~~~~l~~~F 182 (338)
| +||++|+.||+++ ++|||||||+||||+||+++|||.|+|++||+|++++.+ +++||.|+.++++|++.|
T Consensus 74 l~~~~~~i~~ik~~~-----~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~---~~~lP~p~~~~~~l~~~F 145 (250)
T PLN02364 74 IHIALRLLDPIREQF-----PTISFADFHQLAGVVAVEVTGGPDIPFHPGREDKPQPPP---EGRLPDATKGCDHLRDVF 145 (250)
T ss_pred HHHHHHHHHHHHHHc-----CCcCHHHHHHHHHHHHHHhcCCCeeCCCCCCCCcccccc---cCCCCCCCcCHHHHHHHH
Confidence 9 8999999999988 589999999999999999999999999999999999865 467999999999999999
Q ss_pred HH-cCCCcccceeeecccccccccccCCccccccCCCCCCCCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCcccCCCC
Q 019585 183 AR-KGISVDEMVTLVGAHSIGVSHCSSFSKRLYAFNTTHPQDPSMDHRFANFLKNKCPPPPPTDGLGCTRDPTVTQEFVT 261 (338)
Q Consensus 183 ~~-~Gl~~~elVaLsGaHTiG~ahc~~f~~Rl~nf~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~~~~ld~~T 261 (338)
++ +|||++|||||+||||||++|| .|+ +|.| .+ +.|
T Consensus 146 ~~~~Gl~~~d~VaLsGaHTiG~~hc----~r~-~~~g----------------------------------~~----~~t 182 (250)
T PLN02364 146 AKQMGLSDKDIVALSGAHTLGRCHK----DRS-GFEG----------------------------------AW----TSN 182 (250)
T ss_pred HHhcCCCHHHheeeecceeeccccC----CCC-CCCC----------------------------------CC----CCC
Confidence 97 5999999999999999999999 454 3211 01 268
Q ss_pred CCccchHHHHHHhcC--Ccccc--chhhhccCchhHHHHHhhhcChHHHHHHHHHHHHHhhCCCCC
Q 019585 262 PNRLDNKYYRELRNH--RGLLT--SDQTLMDSRLTSKMVLDNERNGAMWGTKFAKAMVHVGSLDVL 323 (338)
Q Consensus 262 p~~FDn~Yy~~l~~~--~gll~--SD~~L~~d~~t~~~V~~~A~d~~~F~~~Fa~Am~Km~~lgv~ 323 (338)
|.+|||+||++|+.+ +|+|. |||+|+.|++|+.+|++||.|++.|+++|++||+||++|++-
T Consensus 183 p~~fDn~Yy~~ll~~~~~gll~l~sD~~L~~d~~T~~~v~~~a~~~~~F~~~Fa~Am~Km~~lg~~ 248 (250)
T PLN02364 183 PLIFDNSYFKELLSGEKEGLLQLVSDKALLDDPVFRPLVEKYAADEDAFFADYAEAHMKLSELGFA 248 (250)
T ss_pred CCccchHHHHHHhcCCcCCCccccchHHHccCchHHHHHHHHhhCHHHHHHHHHHHHHHHHccCCC
Confidence 999999999999999 89865 999999999999999999999999999999999999999974
No 7
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases. Ligninases and related extracellular fungal peroxidases belong to class II of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class II peroxidases are fungal glycoproteins that have been implicated in the oxidative breakdown of lignin, the main cell wall component of woody plants. They contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=6.4e-64 Score=483.30 Aligned_cols=236 Identities=27% Similarity=0.305 Sum_probs=210.8
Q ss_pred HHHHHHHHHHHHHHcCC---CccchhhhhhcccccC------------CCCCceEEcccCCCCCCCcCCCCCCCCCCccH
Q 019585 43 AESIVRKAVNKAVSCNP---GIAAGLIRMHFHDCFV------------RGCDASVLLETIPGNPPSERDDHVNNPSLRGF 107 (338)
Q Consensus 43 ~e~iV~~~v~~~~~~d~---~~a~~llRL~FHDcfv------------~GCDaSiLld~~~~~~~~Ek~~~~N~~~lrg~ 107 (338)
+|..|++.+++.+..+. ..|+.+|||+||||++ +||||||||++ ..|+++++|. +|+
T Consensus 16 ~~~~v~~dl~~~~~~~~~c~~~a~~~lRL~FHD~~~~~~~~~~~~~~~gGcDgSill~~-----~~E~~~~~N~-gL~-- 87 (328)
T cd00692 16 VWFDILDDIQGNLFNGGECGEEAHESLRLTFHDAIGFSPALAAGQFGGGGADGSIVLFD-----DIETAFHANI-GLD-- 87 (328)
T ss_pred chHHHHHHHHHHHhcCCCCchHHHHhHHHhhhcccccccccccCCCCCCCcCceeecCC-----cccccCCCCC-CHH--
Confidence 47789999999998554 4677899999999996 89999999985 3799999999 997
Q ss_pred HHHHHHHHHHHhhCCCCCChhhHHhhhcccccc-ccCCccccccCCCcCCCCCcchhhhccCCCCCCCHHHHHHHHHHcC
Q 019585 108 EVIDEAKAQIEAVCPNTVSCADILTFAARDSTS-KVGGINYAVPAGRRDGRVSLSNEIAENLPSPTFNAEQLAARFARKG 186 (338)
Q Consensus 108 ~~Id~iK~~le~~cp~~VScADilalAardAV~-~~GGP~~~v~~GR~D~~~s~~~~a~~~lP~p~~~~~~l~~~F~~~G 186 (338)
++|+.+|..+|+.| |||||||+||||+||+ ..|||.|+|++||+|++++.+ +++||.|+.++++|++.|+++|
T Consensus 88 ~vvd~lk~~~e~~c---VScADiialAa~~AV~~~~GGP~i~v~~GR~D~~~s~~---~g~LP~p~~sv~~l~~~F~~~G 161 (328)
T cd00692 88 EIVEALRPFHQKHN---VSMADFIQFAGAVAVSNCPGAPRLEFYAGRKDATQPAP---DGLVPEPFDSVDKILARFADAG 161 (328)
T ss_pred HHHHHHHHHHHhcC---cCHHHHHHHHHHHHHHhcCCCCcccccCCCCCCCCCCc---ccCCCCCCCCHHHHHHHHHHcC
Confidence 89999999999998 9999999999999999 469999999999999999864 4689999999999999999999
Q ss_pred CCcccceeeecccccccccccCCccccccCCCCCCCCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCcccCCCCCCccc
Q 019585 187 ISVDEMVTLVGAHSIGVSHCSSFSKRLYAFNTTHPQDPSMDHRFANFLKNKCPPPPPTDGLGCTRDPTVTQEFVTPNRLD 266 (338)
Q Consensus 187 l~~~elVaLsGaHTiG~ahc~~f~~Rl~nf~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~~~~ld~~Tp~~FD 266 (338)
|+.+|||+|+||||||++|. .||+++ .+++| .||.+||
T Consensus 162 f~~~E~VaLsGAHTiG~a~~---------------~Dps~~--------------------------g~p~D-~TP~~FD 199 (328)
T cd00692 162 FSPDELVALLAAHSVAAQDF---------------VDPSIA--------------------------GTPFD-STPGVFD 199 (328)
T ss_pred CCHHHHhhhcccccccccCC---------------CCCCCC--------------------------CCCCC-CCcchhc
Confidence 99999999999999999981 366654 12466 5999999
Q ss_pred hHHHHHHh-cCCc-------------------cccchhhhccCchhHHHHHhhhcChHHHHHHHHHHHHHhhCCCCCCCC
Q 019585 267 NKYYRELR-NHRG-------------------LLTSDQTLMDSRLTSKMVLDNERNGAMWGTKFAKAMVHVGSLDVLTGS 326 (338)
Q Consensus 267 n~Yy~~l~-~~~g-------------------ll~SD~~L~~d~~t~~~V~~~A~d~~~F~~~Fa~Am~Km~~lgv~tg~ 326 (338)
|+||+|++ ++++ +|+||++|+.|++|+.+|++||.||++|+++|++||+||++|||.
T Consensus 200 n~Yf~~ll~~~~~~~g~~~~~~e~~~~~~g~~~L~SD~~L~~D~~T~~~v~~fa~dq~~f~~~Fa~Am~KLs~lgv~--- 276 (328)
T cd00692 200 TQFFIETLLKGTAFPGSGGNQGEVESPLPGEFRLQSDFLLARDPRTACEWQSFVNNQAKMNAAFAAAMLKLSLLGQD--- 276 (328)
T ss_pred HHHHHHHHHcCCCCCCccccccccccCccccccccchHHHhcCCcHHHHHHHHhcCHHHHHHHHHHHHHHHHcCCCC---
Confidence 99999987 5555 499999999999999999999999999999999999999999987
Q ss_pred CCcccccCccCC
Q 019585 327 QGEIRKHCSFVN 338 (338)
Q Consensus 327 ~GeiR~~C~~~n 338 (338)
...+.+|+.|+
T Consensus 277 -~~~l~dcs~v~ 287 (328)
T cd00692 277 -NISLTDCSDVI 287 (328)
T ss_pred -cchhccCcccC
Confidence 33778999875
No 8
>PLN02879 L-ascorbate peroxidase
Probab=100.00 E-value=9.7e-63 Score=460.28 Aligned_cols=220 Identities=22% Similarity=0.347 Sum_probs=197.1
Q ss_pred HHHHHHHHHHHHcCCCccchhhhhhccccc-------CCCCCceEEcccCCCCCCCcCCCCCCCCCCc-cHHHHHHHHHH
Q 019585 45 SIVRKAVNKAVSCNPGIAAGLIRMHFHDCF-------VRGCDASVLLETIPGNPPSERDDHVNNPSLR-GFEVIDEAKAQ 116 (338)
Q Consensus 45 ~iV~~~v~~~~~~d~~~a~~llRL~FHDcf-------v~GCDaSiLld~~~~~~~~Ek~~~~N~~~lr-g~~~Id~iK~~ 116 (338)
+-++..+.+.+ .+...+|.+|||.||||. .+||||||.+. .|+++++|. +|+ ++++|+.||++
T Consensus 18 ~~~~~~~~~~~-~~~~~~p~~vRla~Hdagt~~~~~~~GG~~Gsirf~-------~E~~~~~N~-gL~~~~~~i~~iK~~ 88 (251)
T PLN02879 18 QRCKRKLRGLI-AEKHCAPIVLRLAWHSAGTFDVKTKTGGPFGTIRHP-------QELAHDANN-GLDIAVRLLDPIKEL 88 (251)
T ss_pred HHHHHHHHHHH-hCCCchhHhHHHHHhhhccccCCCCCCCCCeeecCh-------hhccCCCcC-ChHHHHHHHHHHHHH
Confidence 34577777766 456999999999999996 48999999873 699999999 998 99999999998
Q ss_pred HHhhCCCCCChhhHHhhhccccccccCCccccccCCCcCCCCCcchhhhccCCCCCCCHHHHHHHHHHcCCCcccceeee
Q 019585 117 IEAVCPNTVSCADILTFAARDSTSKVGGINYAVPAGRRDGRVSLSNEIAENLPSPTFNAEQLAARFARKGISVDEMVTLV 196 (338)
Q Consensus 117 le~~cp~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~~~a~~~lP~p~~~~~~l~~~F~~~Gl~~~elVaLs 196 (338)
+ ++|||||||+||||+||+.+|||.|+|++||+|++++.+ +++||.|+.++++|++.|+++||+++||||||
T Consensus 89 ~-----~~VScADilalAa~~AV~~~GGP~~~~~~GR~D~~~~~~---~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVALs 160 (251)
T PLN02879 89 F-----PILSYADFYQLAGVVAVEITGGPEIPFHPGRLDKVEPPP---EGRLPQATKGVDHLRDVFGRMGLNDKDIVALS 160 (251)
T ss_pred c-----CCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCCCCc---ccCCCCCCCCHHHHHHHHHHcCCCHHHHeeee
Confidence 7 589999999999999999999999999999999998854 46899999999999999999999999999999
Q ss_pred cccccccccccCCccccccCCCCCCCCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCcccCCCCCCccchHHHHHHhcC
Q 019585 197 GAHSIGVSHCSSFSKRLYAFNTTHPQDPSMDHRFANFLKNKCPPPPPTDGLGCTRDPTVTQEFVTPNRLDNKYYRELRNH 276 (338)
Q Consensus 197 GaHTiG~ahc~~f~~Rl~nf~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~~~~ld~~Tp~~FDn~Yy~~l~~~ 276 (338)
||||||++||. | ++|.| . + +.||.+|||+||++|+.+
T Consensus 161 GaHTiG~ah~~----r-~g~~g----------------------------------~---~-d~tp~~FDN~Yy~~ll~~ 197 (251)
T PLN02879 161 GGHTLGRCHKE----R-SGFEG----------------------------------A---W-TPNPLIFDNSYFKEILSG 197 (251)
T ss_pred ccccccccccc----c-ccCCC----------------------------------C---C-CCCccceeHHHHHHHHcC
Confidence 99999999995 3 23211 1 1 258999999999999999
Q ss_pred --Ccc--ccchhhhccCchhHHHHHhhhcChHHHHHHHHHHHHHhhCCCCCC
Q 019585 277 --RGL--LTSDQTLMDSRLTSKMVLDNERNGAMWGTKFAKAMVHVGSLDVLT 324 (338)
Q Consensus 277 --~gl--l~SD~~L~~d~~t~~~V~~~A~d~~~F~~~Fa~Am~Km~~lgv~t 324 (338)
+|+ |+||++|+.|++|+++|++||.||++|+++|++||+||++||+..
T Consensus 198 ~~~gll~L~SD~aL~~D~~t~~~V~~~A~d~~~F~~~Fa~Am~KL~~lg~~~ 249 (251)
T PLN02879 198 EKEGLLQLPTDKALLDDPLFLPFVEKYAADEDAFFEDYTEAHLKLSELGFAD 249 (251)
T ss_pred CcCCCccchhhHHHhcCCcHHHHHHHHhhCHHHHHHHHHHHHHHHHccCCCC
Confidence 888 689999999999999999999999999999999999999999853
No 9
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised
Probab=100.00 E-value=6.2e-59 Score=436.93 Aligned_cols=223 Identities=27% Similarity=0.399 Sum_probs=205.3
Q ss_pred HHHHHHHHHHHcCCCccchhhhhhcccccCC--------CCCceEEcccCCCCCCCcCCCCCCCCCC-ccHHHHHHHHHH
Q 019585 46 IVRKAVNKAVSCNPGIAAGLIRMHFHDCFVR--------GCDASVLLETIPGNPPSERDDHVNNPSL-RGFEVIDEAKAQ 116 (338)
Q Consensus 46 iV~~~v~~~~~~d~~~a~~llRL~FHDcfv~--------GCDaSiLld~~~~~~~~Ek~~~~N~~~l-rg~~~Id~iK~~ 116 (338)
.|++.|++.+.+++.+++++|||+||||++. ||||||+++ +|+++++|. +| +++++|+.||.+
T Consensus 2 ~v~~~l~~~~~~~~~~~~~llRl~fHD~~~~~~~~~~~gg~dgsi~~~-------~e~~~~~N~-~l~~~~~~l~~ik~~ 73 (255)
T cd00314 2 AIKAILEDLITQAGALAGSLLRLAFHDAGTYDIADGKGGGADGSIRFE-------PELDRPENG-GLDKALRALEPIKSA 73 (255)
T ss_pred hHHHHHHHHHHhCcchHHHHHHHHHHHhccccccCCCCCCCCceEecc-------ccccCcccc-cHHHHHHHHHHHHHH
Confidence 5788999999999999999999999999996 999999996 499999999 86 899999999999
Q ss_pred HHhhCCCCCChhhHHhhhcccccccc--CCccccccCCCcCCCCCc--chhhhccCCCCCCCHHHHHHHHHHcCCCcccc
Q 019585 117 IEAVCPNTVSCADILTFAARDSTSKV--GGINYAVPAGRRDGRVSL--SNEIAENLPSPTFNAEQLAARFARKGISVDEM 192 (338)
Q Consensus 117 le~~cp~~VScADilalAardAV~~~--GGP~~~v~~GR~D~~~s~--~~~a~~~lP~p~~~~~~l~~~F~~~Gl~~~el 192 (338)
+|. |++|||||||+||+++||+.+ |||.|+|++||+|+..+. ...+..++|.|..+++++++.|.++||+++||
T Consensus 74 ~~~--~~~vS~ADlialAa~~Av~~~~~ggp~~~~~~GR~D~~~~~~~~p~P~~~~p~~~~~~~~~~~~F~~~Gl~~~e~ 151 (255)
T cd00314 74 YDG--GNPVSRADLIALAGAVAVESTFGGGPLIPFRFGRLDATEPDLGVPDPEGLLPNETSSATELRDKFKRMGLSPSEL 151 (255)
T ss_pred cCC--CCcccHHHHHHHHHHHHHHHhccCCCeeeeCCCCCCCchhhccCCCCCCCCCCccchHHHHHHHHHHcCCCHHHH
Confidence 998 899999999999999999999 999999999999999764 23345678888889999999999999999999
Q ss_pred eeee-ccccc-ccccccCCccccccCCCCCCCCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCcccCCCCCCccchHHH
Q 019585 193 VTLV-GAHSI-GVSHCSSFSKRLYAFNTTHPQDPSMDHRFANFLKNKCPPPPPTDGLGCTRDPTVTQEFVTPNRLDNKYY 270 (338)
Q Consensus 193 VaLs-GaHTi-G~ahc~~f~~Rl~nf~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~~~~ld~~Tp~~FDn~Yy 270 (338)
|||+ ||||| |++||..+..|+ |+ +|+.||.+|||+||
T Consensus 152 VAL~~GaHti~G~~~~~~~~~~~------------------------~~-----------------~~~~tp~~fDN~yy 190 (255)
T cd00314 152 VALSAGAHTLGGKNHGDLLNYEG------------------------SG-----------------LWTSTPFTFDNAYF 190 (255)
T ss_pred HhhccCCeeccCcccCCCCCccc------------------------CC-----------------CCCCCCCccchHHH
Confidence 9999 99999 999999887764 11 23479999999999
Q ss_pred HHHhcCC----------------ccccchhhhccCchhHHHHHhhhcChHHHHHHHHHHHHHhhC
Q 019585 271 RELRNHR----------------GLLTSDQTLMDSRLTSKMVLDNERNGAMWGTKFAKAMVHVGS 319 (338)
Q Consensus 271 ~~l~~~~----------------gll~SD~~L~~d~~t~~~V~~~A~d~~~F~~~Fa~Am~Km~~ 319 (338)
++++.++ ++|+||++|+.|++|+.+|++||.|++.|+++|++||+||++
T Consensus 191 ~~l~~~~~~~~~~~~~~~~~~~~~~l~sD~~L~~d~~t~~~v~~ya~~~~~f~~~Fa~a~~Km~~ 255 (255)
T cd00314 191 KNLLDMNWEWRVGSPDPDGVKGPGLLPSDYALLSDSETRALVERYASDQEKFFEDFAKAWIKMVN 255 (255)
T ss_pred HHHhcCCcccccCCccCCCcccCCCchhhHHHhcCHhHHHHHHHHHhCHHHHHHHHHHHHHHHcC
Confidence 9999988 899999999999999999999999999999999999999985
No 10
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms, where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to class I of the plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C
Probab=100.00 E-value=1.2e-54 Score=425.45 Aligned_cols=259 Identities=20% Similarity=0.226 Sum_probs=222.0
Q ss_pred HHHHHHHHHHHHcC--------CCccchhhhhhcccccC-------CCCC-ceEEcccCCCCCCCcCCCCCCCCCC-ccH
Q 019585 45 SIVRKAVNKAVSCN--------PGIAAGLIRMHFHDCFV-------RGCD-ASVLLETIPGNPPSERDDHVNNPSL-RGF 107 (338)
Q Consensus 45 ~iV~~~v~~~~~~d--------~~~a~~llRL~FHDcfv-------~GCD-aSiLld~~~~~~~~Ek~~~~N~~~l-rg~ 107 (338)
+.|++.|++.+... ...+|.+|||+||++.+ +|++ |+|.+. +|++++.|. +| +..
T Consensus 45 ~~~~~di~~ll~~s~~~wp~D~g~~gp~lvRlAWh~AgTy~~~d~~GG~ngg~iRf~-------pe~~~~~N~-gL~~a~ 116 (409)
T cd00649 45 EALKEDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIADGRGGAGTGQQRFA-------PLNSWPDNV-NLDKAR 116 (409)
T ss_pred HHHHHHHHHHHhcccccCccccCCcccceeeeeccccccccCcCCCCCCCCCccccc-------cccCcHhhh-hHHHHH
Confidence 57889999988764 37999999999999985 7996 899884 699999999 66 345
Q ss_pred HHHHHHHHHHHhhCCCCCChhhHHhhhccccccccCCccccccCCCcCCCCCcch-------------------------
Q 019585 108 EVIDEAKAQIEAVCPNTVSCADILTFAARDSTSKVGGINYAVPAGRRDGRVSLSN------------------------- 162 (338)
Q Consensus 108 ~~Id~iK~~le~~cp~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~~------------------------- 162 (338)
.+++.|| +++|..||+||+|+||+..||+.+|||.|++.+||.|...+...
T Consensus 117 ~~L~pik----~k~~~~iS~ADL~~LaG~~AiE~~Ggp~ipf~~GR~Da~~~~~~v~wg~~~~~~~~~~~~~~~~l~~pl 192 (409)
T cd00649 117 RLLWPIK----QKYGNKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGPEKEWLADKRYSGDRDLENPL 192 (409)
T ss_pred HHHHHHH----HHcCCCccHHHHHHHHHHHHHHHcCCCcccccCCCCccCCCccccccCcchhcccccccccchhhccch
Confidence 5555555 45566799999999999999999999999999999999754320
Q ss_pred ------------hhhccCCCCCCCHHHHHHHHHHcCCCcccceee-ecccccccccccCCccccccCCCCCCCCCCCCHH
Q 019585 163 ------------EIAENLPSPTFNAEQLAARFARKGISVDEMVTL-VGAHSIGVSHCSSFSKRLYAFNTTHPQDPSMDHR 229 (338)
Q Consensus 163 ------------~a~~~lP~p~~~~~~l~~~F~~~Gl~~~elVaL-sGaHTiG~ahc~~f~~Rl~nf~g~~~~dp~~d~~ 229 (338)
+.+..||+|..++.+|++.|++||||++||||| +||||||++||..|.+||. +||++++.
T Consensus 193 ~a~~mgliyv~Pegp~gLPdP~~sa~~LR~~F~RmGlnd~E~VAL~sGAHTiGkaHc~~~~~rlg-------~dP~~~~~ 265 (409)
T cd00649 193 AAVQMGLIYVNPEGPDGNPDPLAAAKDIRETFARMAMNDEETVALIAGGHTFGKTHGAGPASHVG-------PEPEAAPI 265 (409)
T ss_pred hhhhccccccCCCCCCCCCCCccCHHHHHHHHHHcCCCHHHHeeeccCCcceeecCcccccccCC-------CCCCcCHH
Confidence 112379999999999999999999999999999 5999999999999999982 69999999
Q ss_pred HHHHhh--ccCCCCCCCCCCCCCCCCCcccC---CCCCCccchHHHHHHhc-----------------------------
Q 019585 230 FANFLK--NKCPPPPPTDGLGCTRDPTVTQE---FVTPNRLDNKYYRELRN----------------------------- 275 (338)
Q Consensus 230 ~~~~L~--~~Cp~~~~~~~~~~~~~~~~~ld---~~Tp~~FDn~Yy~~l~~----------------------------- 275 (338)
|++.|+ .+||.+.+. +...+.+| +.||.+|||+||++|+.
T Consensus 266 ~~~gLgw~~~Cp~g~g~------~t~~sglDG~Wt~tP~~FDN~YF~nLl~~eW~~~~~p~g~~Q~~~~~~~~~~~~~d~ 339 (409)
T cd00649 266 EQQGLGWKNSYGTGKGK------DTITSGLEGAWTPTPTKWDNNYLKNLFGYEWELTKSPAGAWQWVPKNAAGENTVPDA 339 (409)
T ss_pred HHHhhcccccCCCCCCC------CCccccCCCCCCCCcchhhHHHHHHHHhccceeccCCCCcccccccCccccccCCCc
Confidence 999996 899975320 12234566 58999999999999998
Q ss_pred -------CCccccchhhhccCchhHHHHHhhhcChHHHHHHHHHHHHHh--hCCCCCCCCCC
Q 019585 276 -------HRGLLTSDQTLMDSRLTSKMVLDNERNGAMWGTKFAKAMVHV--GSLDVLTGSQG 328 (338)
Q Consensus 276 -------~~gll~SD~~L~~d~~t~~~V~~~A~d~~~F~~~Fa~Am~Km--~~lgv~tg~~G 328 (338)
+++||+||++|+.|++|+++|++||.|+++||++|++||+|| +.+||++--.|
T Consensus 340 ~~~~~~~~~gmL~SD~aL~~Dp~tr~iV~~yA~d~~~Ff~dFA~A~~KL~hrdmgp~~~~~g 401 (409)
T cd00649 340 HDPSKKHAPMMLTTDLALRFDPEYEKISRRFLENPDEFADAFAKAWFKLTHRDMGPKSRYLG 401 (409)
T ss_pred cccccccCcccchhhHhhhcCccHHHHHHHHhcCHHHHHHHHHHHHHHHccccCCchhhhcC
Confidence 569999999999999999999999999999999999999999 69999987655
No 11
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=8.7e-53 Score=435.53 Aligned_cols=260 Identities=21% Similarity=0.211 Sum_probs=220.3
Q ss_pred HHHHHHHHHHHHcC--------CCccchhhhhhcccccC-------CCC-CceEEcccCCCCCCCcCCCCCCCCCCccHH
Q 019585 45 SIVRKAVNKAVSCN--------PGIAAGLIRMHFHDCFV-------RGC-DASVLLETIPGNPPSERDDHVNNPSLRGFE 108 (338)
Q Consensus 45 ~iV~~~v~~~~~~d--------~~~a~~llRL~FHDcfv-------~GC-DaSiLld~~~~~~~~Ek~~~~N~~~lrg~~ 108 (338)
+.|++.+++.+... ...+|.+|||+||++.+ +|| .|+|.+. +|++++.|. +| +
T Consensus 55 ~a~~~dl~~l~~~s~~wwpad~g~ygp~~vRlAWHsAgTYr~~d~rGGa~gg~iRf~-------P~~sw~~N~-~L---d 123 (716)
T TIGR00198 55 AAVKQDLKHLMTDSQSWWPADWGHYGGLFIRMAWHAAGTYRIADGRGGAATGNQRFA-------PLNSWPDNV-NL---D 123 (716)
T ss_pred HHHHHHHHHHHhcCcccCccccCCcceeeeeeeccccccccCCCCCCCCCCCceecc-------cccCchhhh-hH---H
Confidence 46889999988764 36999999999999985 788 5888884 689999999 55 5
Q ss_pred HHHHHHHHHHhhCCCCCChhhHHhhhccccccccCCccccccCCCcCCCCCcc--------------------------h
Q 019585 109 VIDEAKAQIEAVCPNTVSCADILTFAARDSTSKVGGINYAVPAGRRDGRVSLS--------------------------N 162 (338)
Q Consensus 109 ~Id~iK~~le~~cp~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~--------------------------~ 162 (338)
...++.+.++++||++|||||||+||+++||+.+|||.|+|.+||+|+..+.. .
T Consensus 124 ka~~lL~pIk~kyp~~VS~ADLivLAG~vAVE~~Ggp~i~f~~GR~D~~~~~~d~~~g~e~~~l~~~~~~~~~l~~p~a~ 203 (716)
T TIGR00198 124 KARRLLWPIKKKYGNKLSWADLIILAGTVAYESMGLKVFGFAGGREDIWEPDKDIYWGAEKEWLTSSREDRESLENPLAA 203 (716)
T ss_pred HHHHHHHHHHHHCCCceeHHHHHHHHHHHHHHHhCCCccCCCCCCCCCCCcccccccccccchhhccccccccccccchh
Confidence 55555666667899999999999999999999999999999999999943220 0
Q ss_pred ----------hhhccCCCCCCCHHHHHHHHHHcCCCcccceeee-cccccccccccCCccccccCCCCCCCCCCCCHHHH
Q 019585 163 ----------EIAENLPSPTFNAEQLAARFARKGISVDEMVTLV-GAHSIGVSHCSSFSKRLYAFNTTHPQDPSMDHRFA 231 (338)
Q Consensus 163 ----------~a~~~lP~p~~~~~~l~~~F~~~Gl~~~elVaLs-GaHTiG~ahc~~f~~Rl~nf~g~~~~dp~~d~~~~ 231 (338)
+....+|+|..++.+|++.|++||||++|||||+ ||||||++||.+|.+|| ++||++++.|+
T Consensus 204 ~~~Gliyvnpeg~~~lPdP~~sa~~Lrd~F~rmGLnd~EmVALiaGaHTiGkaHc~s~~~rl-------g~dP~~~~~~~ 276 (716)
T TIGR00198 204 TEMGLIYVNPEGPDGHPDPLCTAQDIRTTFARMGMNDEETVALIAGGHTVGKCHGAGPAELI-------GPDPEGAPIEE 276 (716)
T ss_pred hhccccccCcccccCCCCCCCCHHHHHHHHHHcCCChHHHeeeecCceeccccCCCcccccC-------CCCCCcCHHHH
Confidence 1123699999999999999999999999999995 99999999999999998 27999999999
Q ss_pred HHhhccCCCCCCCCCCCCCCCCCcccC---CCCCCccchHHHHHHhcC--------------------------------
Q 019585 232 NFLKNKCPPPPPTDGLGCTRDPTVTQE---FVTPNRLDNKYYRELRNH-------------------------------- 276 (338)
Q Consensus 232 ~~L~~~Cp~~~~~~~~~~~~~~~~~ld---~~Tp~~FDn~Yy~~l~~~-------------------------------- 276 (338)
+.|+++||.+.+... +...+.+| +.||.+|||+||+||+.+
T Consensus 277 ~gLg~~c~~~~g~g~----dt~~sglDG~wT~TP~~FDN~YF~nLl~~~w~~~~s~~g~~q~~~~~~~~~~p~~~~~~~~ 352 (716)
T TIGR00198 277 QGLGWHNQYGKGVGR----DTMTSGLEVAWTTTPTQWDNGYFYMLFNYEWELKKSPAGAWQWEAVDAPEIIPDVEDPNKK 352 (716)
T ss_pred HHhcccCCCCCCCCC----CcccccCCCCCCCCCCccchHHHHHHhcCCceeeecCCCCceeeecccccccccccccccc
Confidence 999999986432100 11234566 689999999999999974
Q ss_pred --CccccchhhhccCchhHHHHHhhhcChHHHHHHHHHHHHHhh--CCCCCCCC
Q 019585 277 --RGLLTSDQTLMDSRLTSKMVLDNERNGAMWGTKFAKAMVHVG--SLDVLTGS 326 (338)
Q Consensus 277 --~gll~SD~~L~~d~~t~~~V~~~A~d~~~F~~~Fa~Am~Km~--~lgv~tg~ 326 (338)
.++|+||++|..|++++++|++||.|++.|+++|++||+||+ .+|++.--
T Consensus 353 ~~~~mL~SDlaL~~Dp~~r~iVe~yA~d~~~F~~dFA~Aw~KL~~~d~gp~~~y 406 (716)
T TIGR00198 353 HNPIMLDADLALRFDPEFRKISRRFLREPDYFAEAFAKAWFKLTHRDMGPKSRY 406 (716)
T ss_pred cccCccchhHHhccCccHHHHHHHHhcCHHHHHHHHHHHHHHHcccccCchhhh
Confidence 689999999999999999999999999999999999999999 56665443
No 12
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=1.1e-48 Score=403.01 Aligned_cols=259 Identities=20% Similarity=0.237 Sum_probs=217.3
Q ss_pred HHHHHHHHHHHHcC--------CCccchhhhhhcccccC-------CCCC-ceEEcccCCCCCCCcCCCCCCCCCC-ccH
Q 019585 45 SIVRKAVNKAVSCN--------PGIAAGLIRMHFHDCFV-------RGCD-ASVLLETIPGNPPSERDDHVNNPSL-RGF 107 (338)
Q Consensus 45 ~iV~~~v~~~~~~d--------~~~a~~llRL~FHDcfv-------~GCD-aSiLld~~~~~~~~Ek~~~~N~~~l-rg~ 107 (338)
+.|++.+.+.+... ...+|.+|||+||++.+ +||+ |+|.+. +|.+++.|. +| +..
T Consensus 57 ~a~k~di~~l~~~sqdwwpaD~g~ygp~~vRlAWH~AgTYr~~d~rGGangg~iRf~-------pe~~w~~N~-gL~ka~ 128 (726)
T PRK15061 57 EALKKDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIGDGRGGAGGGQQRFA-------PLNSWPDNV-NLDKAR 128 (726)
T ss_pred HHHHHHHHHHHhcccccccccCCCccceeeeeeecccccccCcCCCCCCCCCcccCc-------ccccchhhh-hHHHHH
Confidence 46889999888764 37899999999999985 7986 888884 689999999 66 345
Q ss_pred HHHHHHHHHHHhhCCCCCChhhHHhhhccccccccCCccccccCCCcCCCCCcch-------------------------
Q 019585 108 EVIDEAKAQIEAVCPNTVSCADILTFAARDSTSKVGGINYAVPAGRRDGRVSLSN------------------------- 162 (338)
Q Consensus 108 ~~Id~iK~~le~~cp~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~~------------------------- 162 (338)
.+++.|| +++|..||+||+|+||+..||+.+|||.|++.+||.|...+...
T Consensus 129 ~~L~pik----~ky~~~iS~ADLi~LaG~vAiE~~Ggp~i~f~~GR~D~~~~~~~v~wg~e~~~l~~~~r~~~~~~l~~p 204 (726)
T PRK15061 129 RLLWPIK----QKYGNKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPEEDVYWGPEKEWLGGDERYSGERDLENP 204 (726)
T ss_pred HHHHHHH----HHhCCCccHHHHHHHHHHHHHHHcCCCccCcCCCCCCCcCCccccccCccccccccccccccccccccc
Confidence 5555555 45567899999999999999999999999999999998654321
Q ss_pred -------------hhhccCCCCCCCHHHHHHHHHHcCCCcccceeee-cccccccccccCCccccccCCCCCCCCCCCCH
Q 019585 163 -------------EIAENLPSPTFNAEQLAARFARKGISVDEMVTLV-GAHSIGVSHCSSFSKRLYAFNTTHPQDPSMDH 228 (338)
Q Consensus 163 -------------~a~~~lP~p~~~~~~l~~~F~~~Gl~~~elVaLs-GaHTiG~ahc~~f~~Rl~nf~g~~~~dp~~d~ 228 (338)
+.+..+|+|..++.+|++.|++||||++|||||+ ||||||++||..|.+|| ++||.+++
T Consensus 205 l~a~~mgliyvnpegp~glPdP~~sa~~lR~tF~RMGmnDeEtVALiaGgHT~GkaHca~~~~rl-------gpdP~~a~ 277 (726)
T PRK15061 205 LAAVQMGLIYVNPEGPNGNPDPLAAARDIRETFARMAMNDEETVALIAGGHTFGKTHGAGDASHV-------GPEPEAAP 277 (726)
T ss_pred hhhhhccceecCCCCCCCCCCcccCHHHHHHHHHHcCCCHHHheeeccCCceeeeCCCcCccccc-------CCCCCcCH
Confidence 0122489999999999999999999999999995 99999999999999998 37999999
Q ss_pred HHHHHhh--ccCCCCCCCCCCCCCCCCCcccC---CCCCCccchHHHHHHhcC---------------------------
Q 019585 229 RFANFLK--NKCPPPPPTDGLGCTRDPTVTQE---FVTPNRLDNKYYRELRNH--------------------------- 276 (338)
Q Consensus 229 ~~~~~L~--~~Cp~~~~~~~~~~~~~~~~~ld---~~Tp~~FDn~Yy~~l~~~--------------------------- 276 (338)
.+++.|+ +.||.+.+. +.....+| +.||.+|||+||++|+.+
T Consensus 278 ~~~qgLgw~~~c~~g~g~------dt~tsGldG~Wt~tPt~fDN~YF~nLl~~~W~~~~sp~G~~qw~~~~~~~~~~~pd 351 (726)
T PRK15061 278 IEEQGLGWKNSYGSGKGA------DTITSGLEGAWTTTPTQWDNGYFENLFGYEWELTKSPAGAWQWVPKDGAAEDTVPD 351 (726)
T ss_pred HHHHhccccccCCCCCCC------CCccccCCCCCCCCcchhhHHHHHHHhhCcceeccCCCccccccccCccccccCCc
Confidence 9999985 899975320 12234466 689999999999999984
Q ss_pred ---------CccccchhhhccCchhHHHHHhhhcChHHHHHHHHHHHHHh--hCCCCCCCCCC
Q 019585 277 ---------RGLLTSDQTLMDSRLTSKMVLDNERNGAMWGTKFAKAMVHV--GSLDVLTGSQG 328 (338)
Q Consensus 277 ---------~gll~SD~~L~~d~~t~~~V~~~A~d~~~F~~~Fa~Am~Km--~~lgv~tg~~G 328 (338)
.+||+||++|..||+++++|++||.|+++|+++|++||+|| ..+|+++---|
T Consensus 352 ~~~~~~~~~~~MLtSD~AL~~DP~~r~iV~~fA~d~~~F~~~FA~A~~KL~hrdmgp~~ry~g 414 (726)
T PRK15061 352 AHDPSKKHAPTMLTTDLALRFDPEYEKISRRFLENPEEFADAFARAWFKLTHRDMGPKSRYLG 414 (726)
T ss_pred ccccccccCcccccccHHhhcCCcHHHHHHHHhcCHHHHHHHHHHHHHHHcccCCCchhhhcC
Confidence 58999999999999999999999999999999999999999 44777654433
No 13
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins. This is a subgroup of heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX) which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions.
Probab=100.00 E-value=1e-49 Score=372.68 Aligned_cols=214 Identities=24% Similarity=0.272 Sum_probs=179.0
Q ss_pred HHHHHcCCCccchhhhhhccccc-------CCCCCceEEcccCCCCCCCcCC-CCCCCCCCccHHHHHHHHHHHHhhCCC
Q 019585 52 NKAVSCNPGIAAGLIRMHFHDCF-------VRGCDASVLLETIPGNPPSERD-DHVNNPSLRGFEVIDEAKAQIEAVCPN 123 (338)
Q Consensus 52 ~~~~~~d~~~a~~llRL~FHDcf-------v~GCDaSiLld~~~~~~~~Ek~-~~~N~~~lrg~~~Id~iK~~le~~cp~ 123 (338)
..+...++++++.+|||+||||| ++||||||+++.. .+|+. .+.|. +|++|+.|+.+
T Consensus 32 ~~~~~~~~~~aa~~LRL~FHDc~t~~~~~g~gGcDgSIlle~~----~~En~G~~~n~-~l~~~~~i~~~---------- 96 (264)
T cd08201 32 DCAPGPGRQAAAEWLRTAFHDMATHNVDDGTGGLDASIQYELD----RPENIGSGFNT-TLNFFVNFYSP---------- 96 (264)
T ss_pred ccCcCCCccHHHHHHHHHHHhhcCcccCCCCCCCCcceeecCC----ChhhccCchhh-ccccceeeccC----------
Confidence 33455788999999999999999 8999999999843 47887 56677 89999888654
Q ss_pred CCChhhHHhhhccccccccCCccccccCCCcCCCCCcchhhhccCCCCCCCHHHHHHHHHHcCCCcccceeeec-ccccc
Q 019585 124 TVSCADILTFAARDSTSKVGGINYAVPAGRRDGRVSLSNEIAENLPSPTFNAEQLAARFARKGISVDEMVTLVG-AHSIG 202 (338)
Q Consensus 124 ~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~~~a~~~lP~p~~~~~~l~~~F~~~Gl~~~elVaLsG-aHTiG 202 (338)
+||||||||||||+||+.+|||.|+|++||+|++++.+. .||.|+.++++|++.|+++||+++|||+||| |||||
T Consensus 97 ~VScADiialAa~~AV~~~GGP~i~v~~GR~Da~~s~~~----glP~P~~~v~~l~~~Fa~~Gfs~~DmVaLsggaHTiG 172 (264)
T cd08201 97 RSSMADLIAMGVVTSVASCGGPVVPFRAGRIDATEAGQA----GVPEPQTDLGTTTESFRRQGFSTSEMIALVACGHTLG 172 (264)
T ss_pred ccCHHHHHHHHHHHHHHHcCCCeecccccCCCccccccc----cCCCCccCHHHHHHHHHHcCCChHHHheeecCCeeee
Confidence 599999999999999999999999999999999988753 4999999999999999999999999999995 99999
Q ss_pred cccccCCccccccCCCCCCCCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCcccCCCCCCccchHHHHHHhcCCc----
Q 019585 203 VSHCSSFSKRLYAFNTTHPQDPSMDHRFANFLKNKCPPPPPTDGLGCTRDPTVTQEFVTPNRLDNKYYRELRNHRG---- 278 (338)
Q Consensus 203 ~ahc~~f~~Rl~nf~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~~~~ld~~Tp~~FDn~Yy~~l~~~~g---- 278 (338)
++||..|.+++ +|... .+...++| .||.+|||+||.+++.+..
T Consensus 173 ~ahc~~f~~~~---------~~g~~-----------------------~~~~~p~d-stp~~FDn~~f~E~l~g~~~~~L 219 (264)
T cd08201 173 GVHSEDFPEIV---------PPGSV-----------------------PDTVLQFF-DTTIQFDNKVVTEYLSGTTNNPL 219 (264)
T ss_pred ecccccchhhc---------CCccc-----------------------cCCCCCCC-CCccccchHHHHHHhcCCCCCce
Confidence 99999988764 11000 01123455 6999999999999998742
Q ss_pred ------cccchhhhccCchhHHHHHhhhcChHHHHHHHHHHHHHhhC
Q 019585 279 ------LLTSDQTLMDSRLTSKMVLDNERNGAMWGTKFAKAMVHVGS 319 (338)
Q Consensus 279 ------ll~SD~~L~~d~~t~~~V~~~A~d~~~F~~~Fa~Am~Km~~ 319 (338)
.+.||..++....-. .++..| +++.|.+..+..+.||.+
T Consensus 220 ~~~~~~~~~sd~r~f~~d~n~-t~~~l~-~~~~f~~~c~~~~~~mi~ 264 (264)
T cd08201 220 VVGPNNTTNSDLRIFSSDGNV-TMNELA-SPDTFQKTCADILQRMID 264 (264)
T ss_pred eecCCCCccchhhheecCccH-HHHHhc-ChHHHHHHHHHHHHHHhC
Confidence 468999999765443 567777 689999999999999974
No 14
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C-terminal do
Probab=100.00 E-value=1.2e-37 Score=294.81 Aligned_cols=221 Identities=18% Similarity=0.217 Sum_probs=175.4
Q ss_pred HHHHHHHHHcCCCccchhhhhhcccccC-------CCCCce-EEcccCCCCCCCcCCCCCCCCC--C-ccHHHHHHHHHH
Q 019585 48 RKAVNKAVSCNPGIAAGLIRMHFHDCFV-------RGCDAS-VLLETIPGNPPSERDDHVNNPS--L-RGFEVIDEAKAQ 116 (338)
Q Consensus 48 ~~~v~~~~~~d~~~a~~llRL~FHDcfv-------~GCDaS-iLld~~~~~~~~Ek~~~~N~~~--l-rg~~~Id~iK~~ 116 (338)
-+.+++.+.......+.||||+||++.+ +|++|+ |.|. +|++++.|. + | +.+.+++.||++
T Consensus 16 i~~lk~~i~~~gl~~~~lvrlAWhsAgTyr~sd~rGGaNGariRl~-------pe~~w~~N~-~~~L~~~~~~Le~ik~~ 87 (297)
T cd08200 16 IAALKAKILASGLTVSELVSTAWASASTFRNSDKRGGANGARIRLA-------PQKDWEVNE-PEELAKVLAVLEGIQKE 87 (297)
T ss_pred HHHHHHHHHhcCCcHHHHHHHhhhccccccCCCCCCCCCcccccCc-------cccCcCccC-cHHHHHHHHHHHHHHHH
Confidence 3667777777778899999999999985 899999 7774 799999999 6 6 356667777666
Q ss_pred HHhh-CC-CCCChhhHHhhhccccccccCC-----ccccccCCCcCCCCCcchhh--hccCCCCC------------CCH
Q 019585 117 IEAV-CP-NTVSCADILTFAARDSTSKVGG-----INYAVPAGRRDGRVSLSNEI--AENLPSPT------------FNA 175 (338)
Q Consensus 117 le~~-cp-~~VScADilalAardAV~~~GG-----P~~~v~~GR~D~~~s~~~~a--~~~lP~p~------------~~~ 175 (338)
.... -+ ..||.||+|+||+..|||.+|| |.+++.+||.|...+..... ...+|.+. ...
T Consensus 88 ~~~~~~~~~~vS~ADLivLaG~vAiE~agg~ag~~p~Ipf~pGR~Da~~~~td~~sf~~l~P~adg~rny~~~~~~~~~~ 167 (297)
T cd08200 88 FNESQSGGKKVSLADLIVLGGCAAVEKAAKDAGVDIKVPFTPGRTDATQEQTDVESFEVLEPKADGFRNYLKKGYRVPPE 167 (297)
T ss_pred hcccccCCccccHHHHHHHHhHHHHHHHHhccCCCceeccCCCCCCcccCCCCcccccccCCCCcccccccccCCCCCHH
Confidence 5311 11 1699999999999999999999 99999999999987643211 12345332 234
Q ss_pred HHHHHHHHHcCCCcccceeeeccc-ccccccccCCccccccCCCCCCCCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCC
Q 019585 176 EQLAARFARKGISVDEMVTLVGAH-SIGVSHCSSFSKRLYAFNTTHPQDPSMDHRFANFLKNKCPPPPPTDGLGCTRDPT 254 (338)
Q Consensus 176 ~~l~~~F~~~Gl~~~elVaLsGaH-TiG~ahc~~f~~Rl~nf~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~~ 254 (338)
+.|++.|.++|||++|||||+||| ++|..|-.++ .| .|
T Consensus 168 ~~Lrd~f~rlglsd~EmvaL~Gg~r~lG~~~~~s~-------~G----------------------------------~w 206 (297)
T cd08200 168 EMLVDKAQLLTLTAPEMTVLVGGLRVLGANYGGSK-------HG----------------------------------VF 206 (297)
T ss_pred HHHHHHHHhCCCChHHHhheecchhhcccCCCCCC-------CC----------------------------------CC
Confidence 778999999999999999999998 6998873210 00 12
Q ss_pred cccCCCCCCccchHHHHHHhcC--------------------Cc-----cccchhhhccCchhHHHHHhhhcC--hHHHH
Q 019585 255 VTQEFVTPNRLDNKYYRELRNH--------------------RG-----LLTSDQTLMDSRLTSKMVLDNERN--GAMWG 307 (338)
Q Consensus 255 ~~ld~~Tp~~FDn~Yy~~l~~~--------------------~g-----ll~SD~~L~~d~~t~~~V~~~A~d--~~~F~ 307 (338)
+.+|.+|||.||+||+.. .| .+.+|..|.+|++.|++|+.||.| ++.||
T Consensus 207 ----T~~p~~f~N~fF~nLLd~~~~W~~~~~~~~~~~~~dr~~g~~~~~~t~~Dl~l~sd~~~R~~ve~YA~dd~~~~F~ 282 (297)
T cd08200 207 ----TDRPGVLTNDFFVNLLDMSTEWKPADEDDGLFEGRDRKTGEVKWTATRVDLVFGSNSELRAVAEVYASDDAQEKFV 282 (297)
T ss_pred ----cCCCCccccHHHHHHhcccceeeecCCCCCceeeccCCCCceeeccChhhhhhccCHHHHHHHHHHhcccchhHHH
Confidence 368999999999999951 01 267899999999999999999998 99999
Q ss_pred HHHHHHHHHhhCCC
Q 019585 308 TKFAKAMVHVGSLD 321 (338)
Q Consensus 308 ~~Fa~Am~Km~~lg 321 (338)
+||++||.||+++.
T Consensus 283 ~DF~~A~~Klmeld 296 (297)
T cd08200 283 KDFVAAWTKVMNLD 296 (297)
T ss_pred HHHHHHHHHHHhcC
Confidence 99999999999874
No 15
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=99.98 E-value=5.6e-32 Score=280.88 Aligned_cols=218 Identities=18% Similarity=0.266 Sum_probs=169.0
Q ss_pred HHHHHHH---HHHcCCCccchhhhhhcccccC-------CCCCce-EEcccCCCCCCCcCCCCCC--CCCC-ccHHHHHH
Q 019585 47 VRKAVNK---AVSCNPGIAAGLIRMHFHDCFV-------RGCDAS-VLLETIPGNPPSERDDHVN--NPSL-RGFEVIDE 112 (338)
Q Consensus 47 V~~~v~~---~~~~d~~~a~~llRL~FHDcfv-------~GCDaS-iLld~~~~~~~~Ek~~~~N--~~~l-rg~~~Id~ 112 (338)
|++.|.. .+....-..+.|||++||++.+ +|++|+ |.|. +|++++.| . +| +.+.+++.
T Consensus 430 v~~di~~lk~~i~~sgl~~~~lVr~AWhsA~Tyr~sd~rGGaNGariRl~-------pe~~w~~N~p~-gL~~vl~~Le~ 501 (716)
T TIGR00198 430 SEGDIKELKQQILASGLSVSELVCTAWASASTFRSSDYRGGANGARIRLE-------PQKNWPVNEPT-RLAKVLAVLEK 501 (716)
T ss_pred HHHHHHHHHHHHHhcCCcHHHHHHHhhhhcccccCCCCCCCCCcceeecc-------hhcCcccCCHH-HHHHHHHHHHH
Confidence 3555544 3445566789999999999985 899998 7774 69999999 5 55 34556666
Q ss_pred HHHHHHhhCC-CCCChhhHHhhhcccccccc---CCc--cccccCCCcCCCCCcchhhhccCC---CC------------
Q 019585 113 AKAQIEAVCP-NTVSCADILTFAARDSTSKV---GGI--NYAVPAGRRDGRVSLSNEIAENLP---SP------------ 171 (338)
Q Consensus 113 iK~~le~~cp-~~VScADilalAardAV~~~---GGP--~~~v~~GR~D~~~s~~~~a~~~lP---~p------------ 171 (338)
||++. | ..||.||+|+||+..|||.+ ||| .+++.+||.|...... +++...| .+
T Consensus 502 Ik~~f----~~~~vS~ADLivLaG~vAVE~aa~~gG~~~~Vpf~pGR~Da~~~~t-d~~~~~~l~p~adgfRn~~~~~~~ 576 (716)
T TIGR00198 502 IQAEF----AKGPVSLADLIVLGGGAAVEKAALDAGISVNVPFLPGRVDATQAMT-DAESFTPLEPIADGFRNYLKRDYA 576 (716)
T ss_pred HHHHc----CCCcccHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCccccCCC-CccccccCCCCCcccchhcccccc
Confidence 66554 4 36999999999999999998 898 5788899999987643 2222222 11
Q ss_pred CCCHHHHHHHHHHcCCCcccceeeecc-cccccccccCCccccccCCCCCCCCCCCCHHHHHHhhccCCCCCCCCCCCCC
Q 019585 172 TFNAEQLAARFARKGISVDEMVTLVGA-HSIGVSHCSSFSKRLYAFNTTHPQDPSMDHRFANFLKNKCPPPPPTDGLGCT 250 (338)
Q Consensus 172 ~~~~~~l~~~F~~~Gl~~~elVaLsGa-HTiG~ahc~~f~~Rl~nf~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~ 250 (338)
....+.|++.|.++|||+.|||||+|| |++|+.|-.++
T Consensus 577 ~~~~~~l~d~a~~lglt~~EmvaL~Gg~r~lG~~~~~s~----------------------------------------- 615 (716)
T TIGR00198 577 VTPEELLLDKAQLLTLTAPEMTVLIGGMRVLGANHGGSK----------------------------------------- 615 (716)
T ss_pred CCHHHHHHHHHHhCCCChHHHHheecchhhccccCCCCC-----------------------------------------
Confidence 123466899999999999999999999 59999983210
Q ss_pred CCCCcccCCCCCCccchHHHHHHhcCC--------------------c---cc--cchhhhccCchhHHHHHhhhcCh--
Q 019585 251 RDPTVTQEFVTPNRLDNKYYRELRNHR--------------------G---LL--TSDQTLMDSRLTSKMVLDNERNG-- 303 (338)
Q Consensus 251 ~~~~~~ld~~Tp~~FDn~Yy~~l~~~~--------------------g---ll--~SD~~L~~d~~t~~~V~~~A~d~-- 303 (338)
...| +.+|.+|||.||+||+... | ++ .+|..|.+|++.|++|+.||+|+
T Consensus 616 ~G~~----T~~p~~f~NdfF~~LLd~~~~w~~~~~~~~~~~~~dr~tg~~~~~~t~~Dl~~~sd~~lra~aE~YA~dd~~ 691 (716)
T TIGR00198 616 HGVF----TDRVGVLSNDFFVNLLDMAYEWRAADNNRYLFEGGDRQTGEVKWTATRVDLVFGSNSILRAVAEVYAQDDAR 691 (716)
T ss_pred CCCC----cCCCCccccHHHHHHhcCCceeeecCCCCceeeeecCCCCceeeccChhheeeccCHHHHHHHHHHhccccc
Confidence 0012 3689999999999998620 1 22 67999999999999999999997
Q ss_pred HHHHHHHHHHHHHhhCCCC
Q 019585 304 AMWGTKFAKAMVHVGSLDV 322 (338)
Q Consensus 304 ~~F~~~Fa~Am~Km~~lgv 322 (338)
+.|++||++||.|+++++-
T Consensus 692 ~~F~~DF~~Aw~Klm~ldr 710 (716)
T TIGR00198 692 EKFVKDFVAAWTKVMNLDR 710 (716)
T ss_pred chHHHHHHHHHHHHHhCCC
Confidence 8999999999999999874
No 16
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=99.97 E-value=6.2e-32 Score=279.26 Aligned_cols=221 Identities=19% Similarity=0.261 Sum_probs=177.2
Q ss_pred HHHHHHHHcCCCccchhhhhhcccccC-------CCCCce-EEcccCCCCCCCcCCCCCCCC-CC-ccHHHHHHHHHHHH
Q 019585 49 KAVNKAVSCNPGIAAGLIRMHFHDCFV-------RGCDAS-VLLETIPGNPPSERDDHVNNP-SL-RGFEVIDEAKAQIE 118 (338)
Q Consensus 49 ~~v~~~~~~d~~~a~~llRL~FHDcfv-------~GCDaS-iLld~~~~~~~~Ek~~~~N~~-~l-rg~~~Id~iK~~le 118 (338)
..+++.+....-..+.|||++||++.+ +|++|+ |.|. +|++++.|.+ +| +.+++++.||++..
T Consensus 442 ~~lk~~i~~~gl~~~~LVr~AWhsA~Tyr~sd~rGGaNGarIRl~-------Pq~~w~~N~p~~L~~vl~~LE~Ik~~f~ 514 (726)
T PRK15061 442 AALKAKILASGLSVSELVSTAWASASTFRGSDKRGGANGARIRLA-------PQKDWEVNEPAQLAKVLAVLEGIQAEFN 514 (726)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHhhcccccCCCCCCCCCccceecc-------cccCccccCHHHHHHHHHHHHHHHHHHh
Confidence 566777777777899999999999985 899999 8884 6999999984 55 46788888888875
Q ss_pred hhC--CCCCChhhHHhhhcccccccc---CC--ccccccCCCcCCCCCcchhhh---ccCCCCC------------CCHH
Q 019585 119 AVC--PNTVSCADILTFAARDSTSKV---GG--INYAVPAGRRDGRVSLSNEIA---ENLPSPT------------FNAE 176 (338)
Q Consensus 119 ~~c--p~~VScADilalAardAV~~~---GG--P~~~v~~GR~D~~~s~~~~a~---~~lP~p~------------~~~~ 176 (338)
..- ...||.||+|+||+..|||.+ || |.+++.+||.|....... ++ ..+|.+. ...+
T Consensus 515 ~~~~~~~~vS~ADLivLaG~vAIE~aa~~aG~~~~VPf~pGR~Da~~~~td-~esf~~l~P~Adgfrny~~~~~~~~~e~ 593 (726)
T PRK15061 515 AAQSGGKKVSLADLIVLGGNAAVEQAAKAAGHDVTVPFTPGRTDATQEQTD-VESFAVLEPKADGFRNYLKKGYSVSPEE 593 (726)
T ss_pred hccCCCCceeHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCCcccCCCC-cccccccCCCCccccccccccCCCCHHH
Confidence 432 126999999999999999998 68 999999999999875432 22 2456543 1237
Q ss_pred HHHHHHHHcCCCcccceeeeccc-ccccccccCCccccccCCCCCCCCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCc
Q 019585 177 QLAARFARKGISVDEMVTLVGAH-SIGVSHCSSFSKRLYAFNTTHPQDPSMDHRFANFLKNKCPPPPPTDGLGCTRDPTV 255 (338)
Q Consensus 177 ~l~~~F~~~Gl~~~elVaLsGaH-TiG~ahc~~f~~Rl~nf~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~~~ 255 (338)
.|++.|.++|||+.|||||+||| ++|..|-.++ ...+
T Consensus 594 ~L~d~a~~lglt~~EmvaL~Gg~r~Lg~~~~~S~-----------------------------------------~G~~- 631 (726)
T PRK15061 594 LLVDKAQLLTLTAPEMTVLVGGLRVLGANYGGSK-----------------------------------------HGVF- 631 (726)
T ss_pred HHHHHHHhCCCChHHHhheecchhhcccCCCCCC-----------------------------------------CCCC-
Confidence 78999999999999999999997 7888772210 0012
Q ss_pred ccCCCCCCccchHHHHHHhcC----------C----------c---c--ccchhhhccCchhHHHHHhhhcC--hHHHHH
Q 019585 256 TQEFVTPNRLDNKYYRELRNH----------R----------G---L--LTSDQTLMDSRLTSKMVLDNERN--GAMWGT 308 (338)
Q Consensus 256 ~ld~~Tp~~FDn~Yy~~l~~~----------~----------g---l--l~SD~~L~~d~~t~~~V~~~A~d--~~~F~~ 308 (338)
+.+|.+|||.||+||+.. . | + +.+|..|.+|++.|++|+.||.| ++.|++
T Consensus 632 ---T~~p~~fsNdfFvnLLdm~~~W~~~~~~~~~ye~~Dr~tg~~~~~~t~~Dlvfgsds~lRa~aEvYA~dd~~~kF~~ 708 (726)
T PRK15061 632 ---TDRPGVLTNDFFVNLLDMGTEWKPTDEDEEVYEGRDRKTGEVKWTATRVDLVFGSNSQLRALAEVYASDDAKEKFVR 708 (726)
T ss_pred ---cCCCCccccHHHHHHhcCCceeeecCCCCCceeeccCCCcceeeccChhheecccCHHHHHHHHHHhcccchhHHHH
Confidence 368999999999999952 0 1 1 47899999999999999999999 999999
Q ss_pred HHHHHHHHhhCCCC
Q 019585 309 KFAKAMVHVGSLDV 322 (338)
Q Consensus 309 ~Fa~Am~Km~~lgv 322 (338)
||++||.|+++++-
T Consensus 709 DF~~Aw~Kvmeldr 722 (726)
T PRK15061 709 DFVAAWTKVMNLDR 722 (726)
T ss_pred HHHHHHHHHHhCCC
Confidence 99999999999874
No 17
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=99.96 E-value=5.1e-29 Score=247.48 Aligned_cols=242 Identities=19% Similarity=0.195 Sum_probs=185.6
Q ss_pred CccchhhhhhcccccCCCCCceEEcc-cCCCCC------CCcCCCCCCCCCC-ccHHHHHHHHHHHHhhCCCCCChhhHH
Q 019585 60 GIAAGLIRMHFHDCFVRGCDASVLLE-TIPGNP------PSERDDHVNNPSL-RGFEVIDEAKAQIEAVCPNTVSCADIL 131 (338)
Q Consensus 60 ~~a~~llRL~FHDcfv~GCDaSiLld-~~~~~~------~~Ek~~~~N~~~l-rg~~~Id~iK~~le~~cp~~VScADil 131 (338)
...|-+|||+||-+. +..+- +++|.. .++.++|.|. +| +++.++..|| ++++..||+||++
T Consensus 93 hYGplfIRmAWHsAG------TYRi~DGRGGa~~G~qRFaPlnSWPDN~-nLDKarRLLWPIK----kKYG~kiSWaDL~ 161 (730)
T COG0376 93 HYGPLFIRMAWHSAG------TYRIGDGRGGAGGGQQRFAPLNSWPDNA-NLDKARRLLWPIK----KKYGRKISWADLI 161 (730)
T ss_pred ccccceeeeeecccC------ceecccCCCCCCCCceecccccCCCccc-chHHHHHHhhhHh----HhhcccccHhHhh
Confidence 488999999999995 44442 222110 3567788888 66 3555555555 5567899999999
Q ss_pred hhhccccccccCCccccccCCCcCCCCCcch-------------------------------------hhhccCCCCCCC
Q 019585 132 TFAARDSTSKVGGINYAVPAGRRDGRVSLSN-------------------------------------EIAENLPSPTFN 174 (338)
Q Consensus 132 alAardAV~~~GGP~~~v~~GR~D~~~s~~~-------------------------------------~a~~~lP~p~~~ 174 (338)
+||+..|++.+|+++|.+..||.|-..+... +-++..|+|..+
T Consensus 162 iLaGnvAlEsMGfktfGFa~GR~D~wepd~dvyWG~e~~wl~d~Ry~~~~~Le~PlaavqMGLIYVNPEGpng~PDpl~a 241 (730)
T COG0376 162 ILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGSEKTWLGDERYSGDRDLENPLAAVQMGLIYVNPEGPNGNPDPLAA 241 (730)
T ss_pred hhhchhhhhhcCCccccccCCCCcCCCCccccccCccccccccccccccccccCchhhheeeeEEeCCCCCCCCCChhhh
Confidence 9999999999999999999999998766540 123568999999
Q ss_pred HHHHHHHHHHcCCCcccceeee-cccccccccccCCccccccCCCCCCCCCCCCHHHHHHhhccCCCCCCCCCCCCCCCC
Q 019585 175 AEQLAARFARKGISVDEMVTLV-GAHSIGVSHCSSFSKRLYAFNTTHPQDPSMDHRFANFLKNKCPPPPPTDGLGCTRDP 253 (338)
Q Consensus 175 ~~~l~~~F~~~Gl~~~elVaLs-GaHTiG~ahc~~f~~Rl~nf~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~ 253 (338)
..+++..|++|+|+++|.|||+ ||||+|++|...-.+.+ +++|.--+--.+.|.+.-..+.+. +..++...
T Consensus 242 A~dIRetFaRMaMNDeETVALiaGGHtfGKtHGag~a~~v-------g~ePe~a~ie~qGlGW~~~~g~G~-G~dtitsG 313 (730)
T COG0376 242 ARDIRETFARMAMNDEETVALIAGGHTFGKTHGAGPASNV-------GPEPEAAPIEQQGLGWANTYGSGK-GPDTITSG 313 (730)
T ss_pred HHHHHHHHHHhcCCcHhhhhhhhcccccccccCCCchhhc-------CCCccccchhhhccccccccCCCc-Cccccccc
Confidence 9999999999999999999997 69999999976533322 367776666666665433222210 11122333
Q ss_pred CcccCCCCCCccchHHHHHHhcC-----------------------------------CccccchhhhccCchhHHHHHh
Q 019585 254 TVTQEFVTPNRLDNKYYRELRNH-----------------------------------RGLLTSDQTLMDSRLTSKMVLD 298 (338)
Q Consensus 254 ~~~ld~~Tp~~FDn~Yy~~l~~~-----------------------------------~gll~SD~~L~~d~~t~~~V~~ 298 (338)
...-++.||++|||.||.+|+.. -.||++|.+|.-||..++|.++
T Consensus 314 lE~~Wt~tPT~w~n~ff~~Lf~yEWeltksPAGa~Qw~~k~~~~~~~pd~~dp~~~~~p~MlttDlaLr~DP~Y~kIs~r 393 (730)
T COG0376 314 LEGAWTTTPTQWSNEFFENLFNYEWELTKSPAGAWQWDAKSAAAETIPDAHDPSKKHGPMMLTTDLALRFDPEYEKISRR 393 (730)
T ss_pred ccccCCCCcchhhhHHHHHHhccceeeecCCCccccccccCccccCCCCCCCcccccCceeeccchhhhcChHHHHHHHH
Confidence 34445689999999999999853 1589999999999999999999
Q ss_pred hhcChHHHHHHHHHHHHHhhCC
Q 019585 299 NERNGAMWGTKFAKAMVHVGSL 320 (338)
Q Consensus 299 ~A~d~~~F~~~Fa~Am~Km~~l 320 (338)
|..|++.|.+.|++||.||..=
T Consensus 394 f~e~pd~F~~~FArAWfKLtHR 415 (730)
T COG0376 394 FLEDPDEFADAFARAWFKLTHR 415 (730)
T ss_pred HHhCHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999863
No 18
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=99.15 E-value=2.5e-10 Score=114.98 Aligned_cols=217 Identities=18% Similarity=0.288 Sum_probs=147.8
Q ss_pred HHHHHHHHcCCCccchhhhhhcccccC-------CCCCceEE-cccCCCCCCCcCCCCCCCC-CC-ccHHHHHHHHHHHH
Q 019585 49 KAVNKAVSCNPGIAAGLIRMHFHDCFV-------RGCDASVL-LETIPGNPPSERDDHVNNP-SL-RGFEVIDEAKAQIE 118 (338)
Q Consensus 49 ~~v~~~~~~d~~~a~~llRL~FHDcfv-------~GCDaSiL-ld~~~~~~~~Ek~~~~N~~-~l-rg~~~Id~iK~~le 118 (338)
..++..+.+..-....|+-.+|-.+-+ +|.+|.-+ | .++|+++.|.+ .| +-+.+++.|.+...
T Consensus 452 ~~lK~~IlasgLsvs~lVstAWaSAsTfRgsDkRGGaNGaRirL-------aPqkdWevN~P~~l~kvl~~le~iq~~fn 524 (730)
T COG0376 452 AALKAKILASGLSVSQLVSTAWASASTFRGSDKRGGANGARIRL-------APQKDWEVNQPAELAKVLAVLEKIQKEFN 524 (730)
T ss_pred HHHHHHHHHccCCHHHHHHHHHHhhhhccCCcccCCcCcceEee-------cccccCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 455666666666777888888877643 57766543 4 36899999973 33 24667777777665
Q ss_pred hhCCCCCChhhHHhhhcccccccc---CCccc--cccCCCcCCCCCcchhhhccC--CC-----------CCCCHHH-HH
Q 019585 119 AVCPNTVSCADILTFAARDSTSKV---GGINY--AVPAGRRDGRVSLSNEIAENL--PS-----------PTFNAEQ-LA 179 (338)
Q Consensus 119 ~~cp~~VScADilalAardAV~~~---GGP~~--~v~~GR~D~~~s~~~~a~~~l--P~-----------p~~~~~~-l~ 179 (338)
..||.||+|+|++..||+.+ .|-.+ ++..||.|..........-.. |- -..+.++ |+
T Consensus 525 ----kkvSlADlIVL~G~a~ie~AAk~aG~~v~VPF~pGR~DA~qeqtDv~sf~~LeP~aDGfRNy~~~~~~~~pe~~Lv 600 (730)
T COG0376 525 ----KKVSLADLIVLGGNAAVEKAAKAAGFSVTVPFAPGRTDASQEQTDVESFAVLEPIADGFRNYVKKDYVLTPEELLV 600 (730)
T ss_pred ----CccchhHheeecchHHHHHHHHhcCceeeeccCCCCcccchhhcchhhhhcccccchhhhhhccCCCcCCHHHHHH
Confidence 46999999999999999874 67655 556899999765432110001 11 1123344 67
Q ss_pred HHHHHcCCCcccceeeeccc-ccccccccCCccccccCCCCCCCCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCcccC
Q 019585 180 ARFARKGISVDEMVTLVGAH-SIGVSHCSSFSKRLYAFNTTHPQDPSMDHRFANFLKNKCPPPPPTDGLGCTRDPTVTQE 258 (338)
Q Consensus 180 ~~F~~~Gl~~~elVaLsGaH-TiG~ahc~~f~~Rl~nf~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~~~~ld 258 (338)
+.=+-.+||..||++|.|+- -+|. ||.|+ ...|+
T Consensus 601 DkAqlL~LtapemtVLiGGlRvLg~-----------n~g~s--------------------------------~~GVf-- 635 (730)
T COG0376 601 DKAQLLTLTAPEMTVLIGGLRVLGA-----------NYGGS--------------------------------KHGVF-- 635 (730)
T ss_pred HHHHHhccCCccceEEEcceEeecc-----------CCCCC--------------------------------cccee--
Confidence 88888999999999999874 2232 22111 01111
Q ss_pred CCCCCccchHHHHHHhcC--------------------Ccc-----ccchhhhccCchhHHHHHhhhcC--hHHHHHHHH
Q 019585 259 FVTPNRLDNKYYRELRNH--------------------RGL-----LTSDQTLMDSRLTSKMVLDNERN--GAMWGTKFA 311 (338)
Q Consensus 259 ~~Tp~~FDn~Yy~~l~~~--------------------~gl-----l~SD~~L~~d~~t~~~V~~~A~d--~~~F~~~Fa 311 (338)
+..|.++.|.||.||+.- .|- -..|..+-++++.|.+.+-||.| ++.|.+||+
T Consensus 636 T~~pg~LtndFFvnLlDM~~~W~~~~~~~~~feg~DrktG~~kwt~trvDLvfGsns~LRA~aEVYa~dda~ekFv~DFv 715 (730)
T COG0376 636 TDRPGVLTNDFFVNLLDMGTEWKPTDDARGLFEGRDRKTGEVKWTATRVDLVFGSNSELRALAEVYASDDAKEKFVKDFV 715 (730)
T ss_pred ccCcccccchhhhhhhhccceeeeccccccceeccccccCceEeeeeEEeEEecCcHHHHHHHHHHhccchHHHHHHHHH
Confidence 236777788888887742 121 25677777889999999999975 799999999
Q ss_pred HHHHHhhCCC
Q 019585 312 KAMVHVGSLD 321 (338)
Q Consensus 312 ~Am~Km~~lg 321 (338)
.||.|..++.
T Consensus 716 aaw~kVMn~D 725 (730)
T COG0376 716 AAWTKVMNLD 725 (730)
T ss_pred HHHHHHhccc
Confidence 9999999875
No 19
>PTZ00411 transaldolase-like protein; Provisional
Probab=52.31 E-value=45 Score=33.11 Aligned_cols=48 Identities=8% Similarity=0.089 Sum_probs=28.6
Q ss_pred cCCccccccCCCcCCCCCcchhhhccCCCC---CCCHHHHHHHHHHcCCCc
Q 019585 142 VGGINYAVPAGRRDGRVSLSNEIAENLPSP---TFNAEQLAARFARKGISV 189 (338)
Q Consensus 142 ~GGP~~~v~~GR~D~~~s~~~~a~~~lP~p---~~~~~~l~~~F~~~Gl~~ 189 (338)
+|-..+..+.||.+...-.+.......+.. -..+.++.+.|++.|+..
T Consensus 180 AGa~~ISPfVGRi~d~~~~~~~~~~~~~~~~~Gv~~v~~i~~~~k~~g~~T 230 (333)
T PTZ00411 180 AGVTLISPFVGRILDWYKKPEKAESYVGAQDPGVISVTKIYNYYKKHGYKT 230 (333)
T ss_pred cCCCEEEeecchHHHhcccccccccccccCCchHHHHHHHHHHHHHcCCCe
Confidence 477888999999865432211111111111 235778889999988864
No 20
>PF11895 DUF3415: Domain of unknown function (DUF3415); InterPro: IPR024589 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Peroxidases are found in bacteria, fungi, plants and animals. Fungal ligninases are extracellular haem enzymes involved in the degradation of lignin. They include lignin peroxidases (LiPs), manganese-dependent peroxidases (MnPs) and versatile peroxidases, which combine the substrate-specificity characteristics of the other two []. In MnP, Mn2+ serves as the reducing substrate []. It is commonly thought that the plant polymer lignin is the second most abundant organic compound on Earth, exceeded only by cellulose. Higher plants synthesise vast quantities of insoluble macromolecules, including lignins. Lignin is an amorphous three-dimensional aromatic biopolymer composed of oxyphenylpropane units. Biodegradation of lignins is slow - it is probable that their decomposition is the rate-limiting step in the biospheric carbon-oxygen cycle, which is mediated almost entirely by the catabolic activities of microorganisms. The white-rot fungi are able extensively to decompose all the important structural components of wood, including both cellulose and lignin. Under the proper environmental conditions, white-rot fungi completely degrade all structural components of lignin, with ultimate formation of CO2 and H2O. The first step in lignin degradation is depolymerisation, catalysed by the LiPs (ligninases). LiPs are secreted, along with hydrogen peroxide (H2O2), by white-rot fungi under conditions of nutrient limitation. The enzymes are not only important in lignin biodegradation, but are also potentially valuable in chemical waste disposal because of their ability to degrade environmental pollutants []. To date, 3D structures have been determined for LiP [] and MnP [] from Phanerochaete chrysosporium (White-rot fungus), and for the fungal peroxidase from Arthromyces ramosus []. All these proteins share the same architecture and consist of 2 all-alpha domains, between which is embedded the haem group. The helical topography of LiPs is nearly identical to that of yeast cytochrome c peroxidase (CCP) [], despite the former having 4 disulphide bonds, which are absent in CCP (MnP has an additional disulphide bond at the C terminus). This uncharacterised C-terminal domain is found in fungal ligninases. It is about 80 amino acids in length and associated with Pfam:PF00141.; PDB: 1B85_B 1B82_A 1B80_A 1YYG_A 1YZP_A 1MNP_A 1MN1_A 1YZR_A 1MN2_A 3M8M_A ....
Probab=50.66 E-value=14 Score=29.07 Aligned_cols=18 Identities=22% Similarity=0.274 Sum_probs=15.3
Q ss_pred HHHHHHHHHHHHhhCCCC
Q 019585 305 MWGTKFAKAMVHVGSLDV 322 (338)
Q Consensus 305 ~F~~~Fa~Am~Km~~lgv 322 (338)
...++|..||.||+.||-
T Consensus 2 ~m~~~F~~am~KlavLG~ 19 (80)
T PF11895_consen 2 KMQSAFKAAMAKLAVLGH 19 (80)
T ss_dssp HHHHHHHHHHHHHCTTTS
T ss_pred hHHHHHHHHHHHHHHhcC
Confidence 356899999999999974
No 21
>COG3763 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=41.71 E-value=24 Score=27.15 Aligned_cols=28 Identities=36% Similarity=0.523 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHcCCCccchhhhhhcccc
Q 019585 46 IVRKAVNKAVSCNPGIAAGLIRMHFHDC 73 (338)
Q Consensus 46 iV~~~v~~~~~~d~~~a~~llRL~FHDc 73 (338)
|.|+.+.+.++.+|.+....||+.+---
T Consensus 24 iark~~~k~lk~NPpine~~iR~M~~qm 51 (71)
T COG3763 24 IARKQMKKQLKDNPPINEEMIRMMMAQM 51 (71)
T ss_pred HHHHHHHHHHhhCCCCCHHHHHHHHHHh
Confidence 7899999999999999999999988433
No 22
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=29.64 E-value=31 Score=27.96 Aligned_cols=20 Identities=15% Similarity=0.169 Sum_probs=9.2
Q ss_pred HHHHHHHHhhcccccccccc
Q 019585 12 MCILILVSTMPLGTSANAKL 31 (338)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~L 31 (338)
+.+||+++++.+++.++++|
T Consensus 9 L~l~LA~lLlisSevaa~~~ 28 (95)
T PF07172_consen 9 LGLLLAALLLISSEVAAREL 28 (95)
T ss_pred HHHHHHHHHHHHhhhhhHHh
Confidence 44444344444444444455
No 23
>COG5661 Predicted secreted Zn-dependent protease [Posttranslational modification, protein turnover, chaperones]
Probab=28.64 E-value=36 Score=31.15 Aligned_cols=44 Identities=14% Similarity=0.114 Sum_probs=27.3
Q ss_pred CcccchhhHHHHHHHHHHHhhccccccc-cccCcCccccCCccHH
Q 019585 1 MSYAKMDSCMIMCILILVSTMPLGTSAN-AKLKVGFYKSTCPSAE 44 (338)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~L~~~fY~~sCP~~e 44 (338)
|+|-||+.|-.++.+|.++..+-+.+.. -.-.+.||.=.=-.++
T Consensus 1 m~~~~~~l~a~l~~~L~~~~a~~a~Ae~ivkk~ysYfSI~gkTaa 45 (210)
T COG5661 1 MMYVKSALRAPLTALLGLLLAGPAEAETIVKKEYSYFSIGGKTAA 45 (210)
T ss_pred CchhHHHHHHHHHHHHHhccCCccccchhheeeeEEEEEcCccHH
Confidence 7899999999888777766655443222 1234678873333333
No 24
>PLN02161 beta-amylase
Probab=23.37 E-value=98 Score=32.55 Aligned_cols=34 Identities=21% Similarity=0.229 Sum_probs=23.2
Q ss_pred HHHhhhcChHHHHHHHHHHHHHhh-----CCCCCCCCCCcccc
Q 019585 295 MVLDNERNGAMWGTKFAKAMVHVG-----SLDVLTGSQGEIRK 332 (338)
Q Consensus 295 ~V~~~A~d~~~F~~~Fa~Am~Km~-----~lgv~tg~~GeiR~ 332 (338)
-++.|.+ |.+.|...|.-+. +|.|=-|+.||.|-
T Consensus 234 plq~Y~D----fm~SFr~~F~~~~~~~I~eI~VGlGP~GELRY 272 (531)
T PLN02161 234 AVQCYED----FMLSFSTKFEPYIGNVIEEISIGLGPSGELRY 272 (531)
T ss_pred HHHHHHH----HHHHHHHHHHHHhcCceEEEEeccccCccccC
Confidence 3566664 6677777666643 55566689999995
No 25
>PF15656 Tox-HDC: Toxin with a H, D/N and C signature
Probab=22.32 E-value=99 Score=26.23 Aligned_cols=23 Identities=17% Similarity=0.225 Sum_probs=16.1
Q ss_pred HHHHHHHHHcCCC--cccceeeeccc
Q 019585 176 EQLAARFARKGIS--VDEMVTLVGAH 199 (338)
Q Consensus 176 ~~l~~~F~~~Gl~--~~elVaLsGaH 199 (338)
.+-++.+ +++++ -.++++|||.|
T Consensus 15 ~~pl~~I-ar~~s~~~~~I~IlSGtH 39 (119)
T PF15656_consen 15 NAPLETI-ARRPSGDNGDIHILSGTH 39 (119)
T ss_pred HHHHHHH-HhCcCCCCCCEEEEeCCC
Confidence 3334444 44565 89999999998
No 26
>KOG0400 consensus 40S ribosomal protein S13 [Translation, ribosomal structure and biogenesis]
Probab=21.73 E-value=67 Score=27.81 Aligned_cols=33 Identities=24% Similarity=0.446 Sum_probs=26.4
Q ss_pred CCHHHHHHHHHHcCCCcccc-eeeeccccccccc
Q 019585 173 FNAEQLAARFARKGISVDEM-VTLVGAHSIGVSH 205 (338)
Q Consensus 173 ~~~~~l~~~F~~~Gl~~~el-VaLsGaHTiG~ah 205 (338)
+++.+-+-.|++|||++.++ |.|--+|-||++.
T Consensus 31 ddvkeqI~K~akKGltpsqIGviLRDshGi~q~r 64 (151)
T KOG0400|consen 31 DDVKEQIYKLAKKGLTPSQIGVILRDSHGIGQVR 64 (151)
T ss_pred HHHHHHHHHHHHcCCChhHceeeeecccCcchhh
Confidence 35666778899999999997 4555999999875
No 27
>PLN00017 photosystem I reaction centre subunit VI; Provisional
Probab=21.25 E-value=55 Score=26.11 Aligned_cols=21 Identities=14% Similarity=0.137 Sum_probs=16.9
Q ss_pred hhhcChHHHHHHHHHHHHHhh
Q 019585 298 DNERNGAMWGTKFAKAMVHVG 318 (338)
Q Consensus 298 ~~A~d~~~F~~~Fa~Am~Km~ 318 (338)
.|-..|+.||+.|+..+.|=+
T Consensus 37 rY~~~QskFFe~~A~~~tkR~ 57 (90)
T PLN00017 37 RYNPLQSKFFETFAAPFTKRG 57 (90)
T ss_pred CCChHHHHHHHHHhhhhhHHH
Confidence 366779999999999887743
No 28
>PHA03156 hypothetical protein; Provisional
Probab=20.65 E-value=1.1e+02 Score=24.72 Aligned_cols=10 Identities=30% Similarity=0.939 Sum_probs=8.9
Q ss_pred CcCccccCCc
Q 019585 32 KVGFYKSTCP 41 (338)
Q Consensus 32 ~~~fY~~sCP 41 (338)
..+||+.+|-
T Consensus 36 ~~~FY~~~C~ 45 (90)
T PHA03156 36 NNNFYSNSCS 45 (90)
T ss_pred CCCccccCcC
Confidence 6899999994
No 29
>PF15312 JSRP: Junctional sarcoplasmic reticulum protein
Probab=20.37 E-value=74 Score=24.16 Aligned_cols=19 Identities=11% Similarity=0.485 Sum_probs=13.6
Q ss_pred chhhHHHHHHHHHHHhhcc
Q 019585 5 KMDSCMIMCILILVSTMPL 23 (338)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~ 23 (338)
-|.|||+++.++++...++
T Consensus 10 TLNkCLvlAslValL~s~f 28 (65)
T PF15312_consen 10 TLNKCLVLASLVALLGSGF 28 (65)
T ss_pred chhhHHHHHHHHHHHHHHH
Confidence 3789999887777665443
Done!