BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>019586
MQQNNYIEAEDAYRRALSIAPDNNKMCNLGICLMKQGRIGEAKETLRRVKPAVADGPRGV
DSHLKAYERAQQMLKDLESEMMNKGGDRVEQSRLFDAFLGSSSIWQPQPCKDHILPTTNA
IKTRDDFADENIDSNVDVNPIVLSKHRSVKKLFPTANAIKTQENFADENINANIVVNQTV
LAQQRGVQQLAPFGNSWNIDAPPFYSSKFVKEPIVKDPIGNQYHESLKRTRSGNATNSMR
LPDVGEHTRPFAMEPEKPENKTRRLSQSSEESGDKLSYLLPDDEDFEEAIIAAVLGSTNE
QPGKSSEASNNSSVIIEKKIDKRLKVFQDITLSLSPRA

High Scoring Gene Products

Symbol, full name Information P value
AT3G51280 protein from Arabidopsis thaliana 6.9e-63
AT5G44330 protein from Arabidopsis thaliana 1.2e-09
ATSDI1
SULPHUR DEFICIENCY-INDUCED 1
protein from Arabidopsis thaliana 1.1e-07
MS5
MALE-STERILE 5
protein from Arabidopsis thaliana 1.6e-07
AT1G04770 protein from Arabidopsis thaliana 1.7e-05

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  019586
        (338 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2080858 - symbol:AT3G51280 "AT3G51280" species...   540  6.9e-63   3
TAIR|locus:2158750 - symbol:AT5G44330 species:3702 "Arabi...   167  1.2e-09   1
TAIR|locus:2156574 - symbol:ATSDI1 "SULPHUR DEFICIENCY-IN...   146  1.1e-07   1
TAIR|locus:2133099 - symbol:MS5 "MALE-STERILE 5" species:...   148  1.6e-07   1
TAIR|locus:2010612 - symbol:AT1G04770 "AT1G04770" species...   127  1.7e-05   1


>TAIR|locus:2080858 [details] [associations]
            symbol:AT3G51280 "AT3G51280" species:3702 "Arabidopsis
            thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0042802
            "identical protein binding" evidence=IEA] [GO:0006260 "DNA
            replication" evidence=RCA] [GO:0006270 "DNA replication initiation"
            evidence=RCA] [GO:0006275 "regulation of DNA replication"
            evidence=RCA] [GO:0006306 "DNA methylation" evidence=RCA]
            [GO:0008283 "cell proliferation" evidence=RCA] [GO:0051567 "histone
            H3-K9 methylation" evidence=RCA] [GO:0051726 "regulation of cell
            cycle" evidence=RCA] InterPro:IPR011990 InterPro:IPR013026
            InterPro:IPR019734 PROSITE:PS50005 PROSITE:PS50293 EMBL:CP002686
            GenomeReviews:BA000014_GR Gene3D:1.25.40.10 EMBL:AL132980
            EMBL:BT006438 EMBL:AK227990 IPI:IPI00535129 PIR:T45759
            RefSeq:NP_190696.1 UniGene:At.10874 ProteinModelPortal:Q9SD20
            SMR:Q9SD20 IntAct:Q9SD20 STRING:Q9SD20 PRIDE:Q9SD20
            EnsemblPlants:AT3G51280.1 GeneID:824291 KEGG:ath:AT3G51280
            TAIR:At3g51280 eggNOG:NOG299995 HOGENOM:HOG000243274
            InParanoid:Q9SD20 OMA:SIAPDNN PhylomeDB:Q9SD20
            ProtClustDB:CLSN2684599 Genevestigator:Q9SD20 Uniprot:Q9SD20
        Length = 430

 Score = 540 (195.1 bits), Expect = 6.9e-63, Sum P(3) = 6.9e-63
 Identities = 109/167 (65%), Positives = 125/167 (74%)

Query:     1 MQQNNYIEAEDAYRRALSIAPDNNKMCNLGICLMKQGRIGEAKETLRRVKPAVADGPRGV 60
             MQ++N++EAEDAYRRALSIAPDNNKMCNLGICLMKQGRI EAKETLRRVKPAV DGPRGV
Sbjct:   181 MQRDNFVEAEDAYRRALSIAPDNNKMCNLGICLMKQGRIDEAKETLRRVKPAVVDGPRGV 240

Query:    61 DSHLKAYERAQQMLKDLESEMMNKGGD-RVEQSRLFDAFLGSSSIWQPQPCKDHILPTTN 119
             DSHLKAYERAQQML DL SEMM +GGD +VEQ RLFDA  GSSSIWQPQPC +  +    
Sbjct:   241 DSHLKAYERAQQMLNDLGSEMMRRGGDDKVEQRRLFDAIFGSSSIWQPQPCSEQTVKAKP 300

Query:   120 --AIKTRDDFADENIDSNVDVNPIVLSKHR-SVKKLFPTANAIKTQE 163
                +   D + DEN+   + VNP+V++  R   K  F +   I   E
Sbjct:   301 KPGLSNGDGYGDENV--KMSVNPVVVNPLRVDAKPFFSSKLVISNNE 345

 Score = 95 (38.5 bits), Expect = 2.9e-60, Sum P(2) = 2.9e-60
 Identities = 31/97 (31%), Positives = 50/97 (51%)

Query:   224 HESLKRTRSGNATNSMRLPDVGEHTRPFAMEPEKPENKTRRLSQSSEESGDKLSYLLPDD 283
             +E LKRTRS +    M     G+H      E E   +  RRLS   E+   +    LPD+
Sbjct:   344 NEKLKRTRSSSQGMGMLSGIGGDH------EGETNTSTRRRLSM--EKKATECG--LPDN 393

Query:   284 EDFEEAIIAAVLGSTNEQPGKSSEASNNSSVIIEKKI 320
             +DFE+AI+AAVLG+  +   K  +   + ++ + + +
Sbjct:   394 KDFEDAIMAAVLGTETKVDKKRLKVFQDITLCLNQSL 430

 Score = 66 (28.3 bits), Expect = 6.9e-63, Sum P(3) = 6.9e-63
 Identities = 15/20 (75%), Positives = 17/20 (85%)

Query:   317 EKKIDK-RLKVFQDITLSLS 335
             E K+DK RLKVFQDITL L+
Sbjct:   408 ETKVDKKRLKVFQDITLCLN 427

 Score = 66 (28.3 bits), Expect = 6.9e-63, Sum P(3) = 6.9e-63
 Identities = 27/76 (35%), Positives = 34/76 (44%)

Query:   195 NSWNIDAPPFYSSKFVKEPIVKDPIGNQYHESLKRTRSGNATNSMRLPDVGEHTRPFAME 254
             N   +DA PF+SSK V        I N  +E LKRTRS +    M     G+H      E
Sbjct:   325 NPLRVDAKPFFSSKLV--------ISN--NEKLKRTRSSSQGMGMLSGIGGDH------E 368

Query:   255 PEKPENKTRRLSQSSE 270
              E   +  RRLS   +
Sbjct:   369 GETNTSTRRRLSMEKK 384


>TAIR|locus:2158750 [details] [associations]
            symbol:AT5G44330 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0006863 "purine nucleobase
            transport" evidence=RCA] InterPro:IPR001440 InterPro:IPR011990
            InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 PROSITE:PS50005
            PROSITE:PS50293 EMBL:CP002688 GenomeReviews:BA000015_GR
            EMBL:AB011475 Gene3D:1.25.40.10 EMBL:DQ056706 IPI:IPI00544319
            RefSeq:NP_199246.1 UniGene:At.55352 ProteinModelPortal:Q9FKV5
            SMR:Q9FKV5 EnsemblPlants:AT5G44330.1 GeneID:834458
            KEGG:ath:AT5G44330 TAIR:At5g44330 eggNOG:NOG271543
            HOGENOM:HOG000152531 InParanoid:Q9FKV5 OMA:WDATIGA PhylomeDB:Q9FKV5
            ProtClustDB:CLSN2685326 Genevestigator:Q9FKV5 Uniprot:Q9FKV5
        Length = 469

 Score = 167 (63.8 bits), Expect = 1.2e-09, P = 1.2e-09
 Identities = 47/139 (33%), Positives = 71/139 (51%)

Query:     1 MQQNNYIEAEDAYRRALSIAPDNNKMCNLGICLMKQGRIGEAKETLRRVKPAVADGPRGV 60
             +Q +NY  AE  YR ALS+ PDNNK+CNL ICL++  R  EAK  L  VK ++ +  +  
Sbjct:   195 LQLHNYGIAEQYYRNALSLEPDNNKLCNLAICLIRMERTHEAKSLLEDVKQSLGNQWKN- 253

Query:    61 DSHLKAYERAQQMLKDLESEMMNKGGDRVEQSRLFDAFLGSSSIWQPQPCKDHILPTT-- 118
             +   K++ERA +ML + E   +    + +  S   D F  SS        K  +  T+  
Sbjct:   254 EPFCKSFERATEMLAEREQATVADKPEDLLTSSFSDNF--SSRCSGGMKGKKALAGTSTE 311

Query:   119 --NAIKTRDDFADENIDSN 135
               N  KT    + E+++ N
Sbjct:   312 LGNIHKTNSHASSESVEQN 330


>TAIR|locus:2156574 [details] [associations]
            symbol:ATSDI1 "SULPHUR DEFICIENCY-INDUCED 1" species:3702
            "Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
            [GO:0006792 "regulation of sulfur utilization" evidence=IMP]
            [GO:0010438 "cellular response to sulfur starvation" evidence=IEP]
            InterPro:IPR001440 InterPro:IPR011990 InterPro:IPR013026
            InterPro:IPR019734 Pfam:PF00515 PROSITE:PS50005 PROSITE:PS50293
            EMBL:CP002688 Gene3D:1.25.40.10 GO:GO:0010438 EMBL:BT005297
            EMBL:AK118038 IPI:IPI00545589 RefSeq:NP_199696.2 UniGene:At.29820
            ProteinModelPortal:Q8GXU5 SMR:Q8GXU5 PRIDE:Q8GXU5
            EnsemblPlants:AT5G48850.1 GeneID:834943 KEGG:ath:AT5G48850
            eggNOG:NOG289549 OMA:AFNGKAT ProtClustDB:CLSN2690694
            Genevestigator:Q8GXU5 GO:GO:0006792 Uniprot:Q8GXU5
        Length = 306

 Score = 146 (56.5 bits), Expect = 1.1e-07, P = 1.1e-07
 Identities = 33/81 (40%), Positives = 47/81 (58%)

Query:     1 MQQNNYIEAEDAYRRALSIAPDNNKMCNLGICLMKQGRIGEAKETLRRVKPAVADGPRGV 60
             MQQ  Y+ AE  YR+A  + PD NK CNL +CL+KQGR  E +  L  V   +     G 
Sbjct:   178 MQQAKYLSAEAVYRKAQMVEPDANKSCNLAMCLIKQGRFEEGRLVLDDV---LEYRVLGA 234

Query:    61 DSHLKAYERAQQMLKDLESEM 81
             D   +  +RA+++L +LES +
Sbjct:   235 DD-CRTRQRAEELLSELESSL 254


>TAIR|locus:2133099 [details] [associations]
            symbol:MS5 "MALE-STERILE 5" species:3702 "Arabidopsis
            thaliana" [GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0009556
            "microsporogenesis" evidence=IMP] InterPro:IPR011990 GO:GO:0005634
            EMBL:CP002687 EMBL:AL080282 Gene3D:1.25.40.10 GO:GO:0009556
            EMBL:AL161553 HOGENOM:HOG000152531 ProtClustDB:CLSN2685326
            IPI:IPI00537393 PIR:T10632 RefSeq:NP_193822.1 UniGene:At.54444
            ProteinModelPortal:Q9SUC3 SMR:Q9SUC3 EnsemblPlants:AT4G20900.1
            GeneID:827838 KEGG:ath:AT4G20900 TAIR:At4g20900 InParanoid:Q9SUC3
            OMA:MKENIAP PhylomeDB:Q9SUC3 ArrayExpress:Q9SUC3
            Genevestigator:Q9SUC3 Uniprot:Q9SUC3
        Length = 450

 Score = 148 (57.2 bits), Expect = 1.6e-07, P = 1.6e-07
 Identities = 30/66 (45%), Positives = 43/66 (65%)

Query:    15 RALSIAPDNNKMCNLGICLMKQGRIGEAKETLRRVKPAVADGPRGVDSHLKAYERAQQML 74
             RAL +  D NK+CNL ICLM+  RI EAK  L  V+ + A+   G +   K+Y+RA +ML
Sbjct:   232 RALGLERDKNKLCNLAICLMRMSRIPEAKSLLDDVRDSPAESECGDEPFAKSYDRAVEML 291

Query:    75 KDLESE 80
              ++ES+
Sbjct:   292 AEIESK 297


>TAIR|locus:2010612 [details] [associations]
            symbol:AT1G04770 "AT1G04770" species:3702 "Arabidopsis
            thaliana" [GO:0009658 "chloroplast organization" evidence=IMP]
            InterPro:IPR001440 InterPro:IPR011990 InterPro:IPR013026
            InterPro:IPR019734 Pfam:PF00515 PROSITE:PS50005 PROSITE:PS50293
            EMBL:CP002684 GO:GO:0009658 Gene3D:1.25.40.10
            ProtClustDB:CLSN2690694 EMBL:AY139988 EMBL:BT008709 IPI:IPI00540075
            RefSeq:NP_171969.2 UniGene:At.42432 UniGene:At.74161
            ProteinModelPortal:Q8L730 SMR:Q8L730 PRIDE:Q8L730
            EnsemblPlants:AT1G04770.1 GeneID:839418 KEGG:ath:AT1G04770
            OMA:SSAAAYN ArrayExpress:Q8L730 Genevestigator:Q8L730
            Uniprot:Q8L730
        Length = 303

 Score = 127 (49.8 bits), Expect = 1.7e-05, P = 1.7e-05
 Identities = 33/81 (40%), Positives = 45/81 (55%)

Query:     1 MQQNNYIEAEDAYRRALSIAPDNNKMCNLGICLMKQGRIGEAKETLRRVKPAVADGPRGV 60
             MQ  +Y  AE  YR+A  I PD NK CNL  CL+KQG+  EA+  L R    + +   G 
Sbjct:   171 MQLMDYTAAEAVYRKAQLIEPDANKACNLCTCLIKQGKHDEARSILFR--DVLMENKEGS 228

Query:    61 -DSHLKAYERAQQMLKDLESE 80
              D  L A  R Q++L +L+ +
Sbjct:   229 GDPRLMA--RVQELLSELKPQ 247


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.312   0.129   0.364    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      338       338   0.00094  116 3  11 23  0.47    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  607 (65 KB)
  Total size of DFA:  218 KB (2121 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  35.04u 0.08s 35.12t   Elapsed:  00:00:01
  Total cpu time:  35.04u 0.08s 35.12t   Elapsed:  00:00:01
  Start:  Mon May 20 18:23:49 2013   End:  Mon May 20 18:23:50 2013

Back to top