Query 019589
Match_columns 338
No_of_seqs 471 out of 2825
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 04:06:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019589.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019589hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2dn9_A DNAJ homolog subfamily 99.8 6.9E-21 2.4E-25 146.3 7.7 71 67-137 4-74 (79)
2 1hdj_A Human HSP40, HDJ-1; mol 99.8 2.9E-20 9.8E-25 142.2 8.4 68 69-137 2-69 (77)
3 2ctp_A DNAJ homolog subfamily 99.8 2.4E-20 8.3E-25 143.0 7.8 70 67-137 4-73 (78)
4 2ej7_A HCG3 gene; HCG3 protein 99.8 3.2E-20 1.1E-24 143.5 8.0 70 68-137 7-77 (82)
5 2yua_A Williams-beuren syndrom 99.8 4E-20 1.4E-24 148.3 8.2 72 65-136 12-83 (99)
6 2ctr_A DNAJ homolog subfamily 99.8 6.2E-20 2.1E-24 144.0 7.8 70 67-137 4-73 (88)
7 2cug_A Mkiaa0962 protein; DNAJ 99.8 7.7E-20 2.6E-24 143.5 7.7 69 68-137 15-83 (88)
8 2och_A Hypothetical protein DN 99.8 6.6E-20 2.3E-24 138.8 7.0 66 68-136 6-71 (73)
9 2dmx_A DNAJ homolog subfamily 99.8 1.4E-19 4.7E-24 143.1 8.3 70 68-137 7-77 (92)
10 2ctq_A DNAJ homolog subfamily 99.8 9.1E-20 3.1E-24 149.4 7.3 71 67-137 17-87 (112)
11 2ctw_A DNAJ homolog subfamily 99.8 1.6E-19 5.5E-24 147.3 8.7 70 68-137 15-84 (109)
12 2l6l_A DNAJ homolog subfamily 99.8 7.6E-20 2.6E-24 158.0 5.8 71 67-137 7-83 (155)
13 1wjz_A 1700030A21RIK protein; 99.8 1.5E-19 5E-24 143.3 6.7 70 67-136 13-88 (94)
14 2o37_A Protein SIS1; HSP40, J- 99.8 1.5E-19 5.2E-24 143.0 6.6 68 68-138 6-73 (92)
15 1bq0_A DNAJ, HSP40; chaperone, 99.8 9.6E-20 3.3E-24 147.0 4.4 70 69-138 2-71 (103)
16 2lgw_A DNAJ homolog subfamily 99.8 3.2E-19 1.1E-23 143.1 6.7 68 70-137 2-70 (99)
17 2qsa_A DNAJ homolog DNJ-2; J-d 99.7 1E-18 3.4E-23 142.4 4.7 70 68-137 13-86 (109)
18 3apq_A DNAJ homolog subfamily 99.7 5.1E-18 1.7E-22 151.7 6.3 68 70-137 2-69 (210)
19 2ys8_A RAB-related GTP-binding 99.7 5.1E-18 1.8E-22 133.7 4.9 62 69-131 26-87 (90)
20 2pf4_E Small T antigen; PP2A, 99.7 2.9E-18 9.9E-23 150.4 1.7 66 68-137 9-76 (174)
21 1gh6_A Large T antigen; tumor 99.7 5.6E-18 1.9E-22 139.2 1.2 66 68-137 6-73 (114)
22 3hho_A CO-chaperone protein HS 99.7 3.5E-17 1.2E-21 144.1 5.5 68 68-135 2-76 (174)
23 3bvo_A CO-chaperone protein HS 99.7 8E-17 2.7E-21 145.4 6.5 81 55-135 28-115 (207)
24 1iur_A KIAA0730 protein; DNAJ 99.6 2.9E-17 1E-21 128.9 2.7 67 66-132 12-79 (88)
25 1faf_A Large T antigen; J doma 99.6 5E-17 1.7E-21 125.1 3.9 62 68-133 9-72 (79)
26 3lz8_A Putative chaperone DNAJ 99.6 1.1E-17 3.8E-22 160.9 0.0 69 67-136 25-93 (329)
27 1fpo_A HSC20, chaperone protei 99.6 8.5E-17 2.9E-21 141.2 4.8 66 70-135 1-73 (171)
28 1n4c_A Auxilin; four helix bun 99.6 1.7E-16 5.7E-21 140.1 3.6 64 69-132 116-182 (182)
29 2guz_A Mitochondrial import in 99.6 4.1E-16 1.4E-20 117.5 3.0 59 67-129 11-70 (71)
30 2qwo_B Putative tyrosine-prote 99.6 4.3E-16 1.5E-20 123.1 2.4 56 70-125 33-91 (92)
31 3uo3_A J-type CO-chaperone JAC 99.6 8.8E-16 3E-20 135.9 3.9 65 68-135 9-80 (181)
32 3ag7_A Putative uncharacterize 99.5 1.4E-15 4.8E-20 123.4 2.8 59 68-127 39-104 (106)
33 3apo_A DNAJ homolog subfamily 99.5 1.7E-15 6E-20 159.6 0.6 71 67-137 18-88 (780)
34 2y4t_A DNAJ homolog subfamily 98.9 1E-09 3.5E-14 104.8 5.4 65 70-134 382-449 (450)
35 2guz_B Mitochondrial import in 98.9 1.3E-09 4.5E-14 80.4 4.7 53 70-126 4-59 (65)
36 1iqz_A Ferredoxin; iron-sulfer 98.5 7.9E-08 2.7E-12 72.9 3.5 60 155-215 3-71 (81)
37 1dax_A Ferredoxin I; electron 98.3 4.7E-07 1.6E-11 65.0 3.6 60 155-214 3-63 (64)
38 1rof_A Ferredoxin; electron tr 98.1 1.7E-06 5.7E-11 60.8 4.2 58 156-214 3-60 (60)
39 1sj1_A Ferredoxin; thermostabi 98.1 1.4E-06 4.8E-11 62.4 2.7 58 156-214 4-65 (66)
40 1dwl_A Ferredoxin I; electron 98.0 1.8E-06 6.2E-11 60.4 2.4 58 156-213 2-59 (59)
41 1f2g_A Ferredoxin II; electron 97.9 3.7E-06 1.3E-10 58.9 2.1 55 156-212 2-57 (58)
42 1rgv_A Ferredoxin; electron tr 97.1 0.00034 1.2E-08 52.2 3.5 65 157-226 2-73 (80)
43 1xer_A Ferredoxin; electron tr 97.0 6.7E-05 2.3E-09 58.7 -0.8 60 155-214 37-102 (103)
44 2fgo_A Ferredoxin; allochromat 97.0 0.00042 1.4E-08 52.0 3.6 67 157-228 2-75 (82)
45 3eun_A Ferredoxin; electron tr 96.8 0.00067 2.3E-08 51.0 2.8 55 157-215 2-63 (82)
46 1jb0_C Photosystem I iron-sulf 96.7 0.00012 4.1E-09 54.3 -2.1 60 156-215 3-67 (80)
47 2zvs_A Uncharacterized ferredo 96.6 0.00089 3E-08 50.6 2.7 67 157-228 2-76 (85)
48 1jnr_B Adenylylsulfate reducta 96.2 0.0017 5.7E-08 55.0 2.2 62 156-218 3-70 (150)
49 3gyx_B Adenylylsulfate reducta 96.2 0.0016 5.5E-08 56.0 2.0 62 156-218 2-69 (166)
50 1bc6_A 7-Fe ferredoxin; electr 96.2 0.0086 2.9E-07 44.0 5.7 64 157-224 2-68 (77)
51 1h98_A Ferredoxin; electron tr 96.1 0.0063 2.1E-07 45.0 4.6 63 157-223 2-67 (78)
52 1kqf_B FDH-N beta S, formate d 95.8 0.0021 7.1E-08 60.4 0.9 59 155-216 125-190 (294)
53 3i9v_9 NADH-quinone oxidoreduc 95.6 0.002 6.7E-08 55.2 -0.1 57 159-215 49-118 (182)
54 2fdn_A Ferredoxin; electron tr 95.4 0.0039 1.3E-07 42.7 1.0 50 160-213 5-55 (55)
55 7fd1_A FD1, protein (7-Fe ferr 95.3 0.013 4.5E-07 45.9 3.8 55 157-215 2-59 (106)
56 2v2k_A Ferredoxin; iron, trans 95.2 0.0023 8E-08 50.1 -0.9 65 157-225 2-69 (105)
57 1gte_A Dihydropyrimidine dehyd 95.2 0.0029 1E-07 68.8 -0.5 58 155-215 945-1007(1025)
58 1ti6_B Pyrogallol hydroxytrans 94.9 0.019 6.6E-07 53.2 4.2 62 154-218 90-162 (274)
59 1hfe_L Protein (Fe-only hydrog 94.5 0.0036 1.2E-07 61.6 -1.7 55 155-212 27-83 (421)
60 2vpz_B NRFC protein; oxidoredu 94.5 0.029 9.9E-07 49.3 4.2 57 155-215 82-145 (195)
61 3c8y_A Iron hydrogenase 1; dit 94.2 0.0047 1.6E-07 63.1 -1.7 61 155-215 139-210 (574)
62 3i9v_3 NADH-quinone oxidoreduc 93.8 0.0088 3E-07 63.3 -0.6 62 154-215 172-240 (783)
63 1h0h_B Formate dehydrogenase ( 92.7 0.026 8.9E-07 50.3 0.7 59 155-216 100-167 (214)
64 2ivf_B Ethylbenzene dehydrogen 92.3 0.047 1.6E-06 52.5 1.9 59 155-216 176-241 (352)
65 3j16_B RLI1P; ribosome recycli 91.8 0.054 1.8E-06 55.7 1.8 31 153-215 45-75 (608)
66 1q16_B Respiratory nitrate red 90.3 0.096 3.3E-06 52.7 1.9 57 155-213 209-271 (512)
67 2c42_A Pyruvate-ferredoxin oxi 89.4 0.077 2.6E-06 58.9 0.4 61 157-217 682-768 (1231)
68 2gmh_A Electron transfer flavo 87.3 0.27 9.3E-06 49.9 2.9 56 158-215 507-573 (584)
69 1q16_B Respiratory nitrate red 86.5 0.41 1.4E-05 48.1 3.6 60 154-215 175-237 (512)
70 2pzi_A Probable serine/threoni 85.8 0.46 1.6E-05 48.7 3.7 46 69-122 628-675 (681)
71 2ivf_B Ethylbenzene dehydrogen 85.0 0.35 1.2E-05 46.4 2.1 60 154-215 142-204 (352)
72 3or1_B Sulfite reductase beta; 84.1 0.17 6E-06 49.0 -0.5 14 83-96 107-120 (386)
73 3mm5_B Sulfite reductase, diss 83.8 0.19 6.4E-06 48.4 -0.4 56 155-212 199-258 (366)
74 2vpz_B NRFC protein; oxidoredu 81.4 1.4 4.9E-05 38.3 4.5 60 154-216 49-111 (195)
75 3bk7_A ABC transporter ATP-bin 78.8 0.61 2.1E-05 47.8 1.4 21 154-174 60-80 (607)
76 1h0h_B Formate dehydrogenase ( 66.5 1.3 4.5E-05 39.1 0.3 57 157-215 66-130 (214)
77 3mm5_A Sulfite reductase, diss 66.3 1.5 5E-05 43.0 0.6 22 155-176 278-299 (418)
78 7fd1_A FD1, protein (7-Fe ferr 60.6 3.7 0.00013 31.5 1.9 28 155-182 31-59 (106)
79 1kqf_B FDH-N beta S, formate d 60.5 2.5 8.5E-05 39.1 1.0 57 156-215 93-153 (294)
80 1ti6_B Pyrogallol hydroxytrans 59.1 4.1 0.00014 37.4 2.2 58 155-215 60-119 (274)
81 2pa8_D DNA-directed RNA polyme 50.3 3.6 0.00012 37.5 0.2 51 164-218 174-225 (265)
82 2v2k_A Ferredoxin; iron, trans 46.2 6.3 0.00022 29.9 1.0 25 156-180 32-57 (105)
83 3or1_A Sulfite reductase alpha 46.2 4.8 0.00017 39.6 0.4 33 155-187 295-327 (437)
84 3mm5_B Sulfite reductase, diss 41.9 6.1 0.00021 37.7 0.4 27 199-225 214-241 (366)
85 3i9v_9 NADH-quinone oxidoreduc 40.6 5.5 0.00019 33.2 -0.2 27 156-182 91-118 (182)
86 1kf6_B Fumarate reductase iron 36.8 4.4 0.00015 36.0 -1.4 14 156-169 141-154 (243)
87 2c42_A Pyruvate-ferredoxin oxi 32.4 7.4 0.00025 43.2 -0.8 20 156-175 737-756 (1231)
88 1jnr_B Adenylylsulfate reducta 30.7 8.4 0.00029 31.8 -0.6 25 156-180 40-65 (150)
89 2wdq_B Succinate dehydrogenase 30.5 15 0.00052 32.2 1.1 11 159-169 202-212 (238)
90 1hfe_L Protein (Fe-only hydrog 29.2 18 0.00061 35.1 1.3 19 158-176 61-79 (421)
91 3or1_B Sulfite reductase beta; 28.8 16 0.00056 35.0 1.0 16 199-214 225-240 (386)
92 3gyx_B Adenylylsulfate reducta 27.7 10 0.00035 31.8 -0.6 21 156-176 39-59 (166)
93 2bs2_B Quinol-fumarate reducta 27.6 5.5 0.00019 35.3 -2.4 20 159-210 147-166 (241)
94 2h88_B Succinate dehydrogenase 27.0 18 0.00062 32.2 0.9 19 158-176 153-171 (252)
95 2wdq_B Succinate dehydrogenase 26.4 19 0.00065 31.6 0.9 20 157-176 143-162 (238)
96 1kf6_B Fumarate reductase iron 25.0 23 0.00078 31.2 1.2 11 159-169 200-210 (243)
97 2l53_B CAM, voltage-gated sodi 23.2 45 0.0016 20.3 1.9 19 305-323 8-26 (31)
98 3vr8_B Iron-sulfur subunit of 23.2 31 0.0011 31.7 1.7 15 161-175 180-194 (282)
99 3mm5_A Sulfite reductase, diss 23.1 13 0.00045 36.2 -0.9 26 199-225 261-286 (418)
100 1qqr_A Streptokinase domain B; 21.6 43 0.0015 27.4 2.0 32 71-102 33-64 (138)
No 1
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.83 E-value=6.9e-21 Score=146.28 Aligned_cols=71 Identities=41% Similarity=0.677 Sum_probs=66.7
Q ss_pred CccCCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChhHHHHHHHHHHHHHHcCChhHhhhhhhhcc
Q 019589 67 AIADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYDEIHG 137 (338)
Q Consensus 67 ~~~~d~Y~vLgv~~~as~~eIk~aYr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~G 137 (338)
....|||+||||+++++.++||++||+|+++||||++++.+.+.+.|+.|++||++|+||.+|..||.++.
T Consensus 4 ~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~ 74 (79)
T 2dn9_A 4 GSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGS 74 (79)
T ss_dssp SCCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCC
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccC
Confidence 45679999999999999999999999999999999998778889999999999999999999999999763
No 2
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.82 E-value=2.9e-20 Score=142.22 Aligned_cols=68 Identities=38% Similarity=0.596 Sum_probs=64.0
Q ss_pred cCCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChhHHHHHHHHHHHHHHcCChhHhhhhhhhcc
Q 019589 69 ADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYDEIHG 137 (338)
Q Consensus 69 ~~d~Y~vLgv~~~as~~eIk~aYr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~G 137 (338)
..|||+||||++++|.++||++|++|++++|||+++. +.+.+.|+.|++||++|+||.+|..||.++.
T Consensus 2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~ 69 (77)
T 1hdj_A 2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKE-PGAEEKFKEIAEAYDVLSDPRKREIFDRYGE 69 (77)
T ss_dssp CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCC-TTHHHHHHHHHHHHHHTTCHHHHHHHHHTCG
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHHCCHHHHHHHHHHcc
Confidence 4699999999999999999999999999999999986 6688999999999999999999999999864
No 3
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.81 E-value=2.4e-20 Score=142.96 Aligned_cols=70 Identities=37% Similarity=0.581 Sum_probs=65.5
Q ss_pred CccCCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChhHHHHHHHHHHHHHHcCChhHhhhhhhhcc
Q 019589 67 AIADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYDEIHG 137 (338)
Q Consensus 67 ~~~~d~Y~vLgv~~~as~~eIk~aYr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~G 137 (338)
....|||+||||+++++.++||++|++|+++||||++.. +.+.+.|+.|++||++|+||.+|..||.++.
T Consensus 4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~ 73 (78)
T 2ctp_A 4 GSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHA-PGATEAFKAIGTAYAVLSNPEKRKQYDQFGS 73 (78)
T ss_dssp SCSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSS-HHHHHHHHHHHHHHHHHTSHHHHHHHHHTCS
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHHCCHHHHHHHHHcCc
Confidence 356799999999999999999999999999999999987 7789999999999999999999999999764
No 4
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.81 E-value=3.2e-20 Score=143.53 Aligned_cols=70 Identities=36% Similarity=0.485 Sum_probs=64.7
Q ss_pred ccCCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCh-hHHHHHHHHHHHHHHcCChhHhhhhhhhcc
Q 019589 68 IADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDP-ETTNFCMFINEVYAVLSDPVQRMVYDEIHG 137 (338)
Q Consensus 68 ~~~d~Y~vLgv~~~as~~eIk~aYr~l~~~~HPD~~~~~~-~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~G 137 (338)
...|||+||||+++++.++||++|++|+++||||+++... .+.+.|+.|++||++|+||.+|..||.++.
T Consensus 7 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~ 77 (82)
T 2ej7_A 7 GMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGS 77 (82)
T ss_dssp SSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCC
T ss_pred CCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCc
Confidence 4579999999999999999999999999999999998753 578899999999999999999999999763
No 5
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.81 E-value=4e-20 Score=148.25 Aligned_cols=72 Identities=31% Similarity=0.393 Sum_probs=67.0
Q ss_pred CCCccCCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChhHHHHHHHHHHHHHHcCChhHhhhhhhhc
Q 019589 65 TDAIADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYDEIH 136 (338)
Q Consensus 65 ~~~~~~d~Y~vLgv~~~as~~eIk~aYr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~ 136 (338)
......|||+||||+++++.++||++||+|+++||||++.+++.+.+.|+.|++||+||+||.+|..||...
T Consensus 12 ~~~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l 83 (99)
T 2yua_A 12 CSYSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGL 83 (99)
T ss_dssp CSSCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTC
T ss_pred CCCCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhc
Confidence 345678999999999999999999999999999999999877889999999999999999999999999853
No 6
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.80 E-value=6.2e-20 Score=144.01 Aligned_cols=70 Identities=33% Similarity=0.497 Sum_probs=65.5
Q ss_pred CccCCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChhHHHHHHHHHHHHHHcCChhHhhhhhhhcc
Q 019589 67 AIADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYDEIHG 137 (338)
Q Consensus 67 ~~~~d~Y~vLgv~~~as~~eIk~aYr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~G 137 (338)
....|||+||||+++++.++||++||+|+++||||+++. +.+.+.|+.|++||++|+||.+|..||.++.
T Consensus 4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~-~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~ 73 (88)
T 2ctr_A 4 GSSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKS-PDAEAKFREIAEAYETLSDANRRKEYDTLGH 73 (88)
T ss_dssp CCCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCS-HHHHHHHHHHHHHHHHHHSSHHHHHHHHTCH
T ss_pred CCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC-hHHHHHHHHHHHHHHHHCCHHHHHHHHHhCc
Confidence 356799999999999999999999999999999999986 7889999999999999999999999999764
No 7
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.80 E-value=7.7e-20 Score=143.49 Aligned_cols=69 Identities=33% Similarity=0.517 Sum_probs=65.0
Q ss_pred ccCCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChhHHHHHHHHHHHHHHcCChhHhhhhhhhcc
Q 019589 68 IADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYDEIHG 137 (338)
Q Consensus 68 ~~~d~Y~vLgv~~~as~~eIk~aYr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~G 137 (338)
...|||+||||+++++.++||++||+|+++||||+++. +.+.+.|++|++||++|+||.+|..||.++.
T Consensus 15 ~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~ 83 (88)
T 2cug_A 15 LDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKD-PGAEDRFIQISKAYEILSNEEKRTNYDHYGS 83 (88)
T ss_dssp SSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCS-TTHHHHHHHHHHHHHHHHSHHHHHHHHHHTT
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC-hhHHHHHHHHHHHHHHHCCHHHHHHHHHcCC
Confidence 46799999999999999999999999999999999987 6789999999999999999999999999864
No 8
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.80 E-value=6.6e-20 Score=138.83 Aligned_cols=66 Identities=38% Similarity=0.581 Sum_probs=61.7
Q ss_pred ccCCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChhHHHHHHHHHHHHHHcCChhHhhhhhhhc
Q 019589 68 IADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYDEIH 136 (338)
Q Consensus 68 ~~~d~Y~vLgv~~~as~~eIk~aYr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~ 136 (338)
...|||+||||+++++.++||++|++|++++|||++++ ..+.|+.|++||++|+||.+|..||.+|
T Consensus 6 ~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~---~~~~f~~i~~Ay~~L~d~~~R~~YD~~g 71 (73)
T 2och_A 6 KETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPD---GAEQFKQISQAYEVLSDEKKRQIYDQGG 71 (73)
T ss_dssp CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTT---CHHHHHHHHHHHHHHTSHHHHHHHHHTC
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcC---HHHHHHHHHHHHHHHCCHHHHHHHHhcC
Confidence 45799999999999999999999999999999999876 3689999999999999999999999975
No 9
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.79 E-value=1.4e-19 Score=143.11 Aligned_cols=70 Identities=39% Similarity=0.591 Sum_probs=64.7
Q ss_pred ccCCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCC-hhHHHHHHHHHHHHHHcCChhHhhhhhhhcc
Q 019589 68 IADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDD-PETTNFCMFINEVYAVLSDPVQRMVYDEIHG 137 (338)
Q Consensus 68 ~~~d~Y~vLgv~~~as~~eIk~aYr~l~~~~HPD~~~~~-~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~G 137 (338)
...|||+||||+++++.++||++|++|+++||||+++.. ..+++.|++|++||++|+||.+|..||.++.
T Consensus 7 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~ 77 (92)
T 2dmx_A 7 GMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGC 77 (92)
T ss_dssp CCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCS
T ss_pred CCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCc
Confidence 457999999999999999999999999999999999864 4678999999999999999999999999764
No 10
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.79 E-value=9.1e-20 Score=149.42 Aligned_cols=71 Identities=24% Similarity=0.400 Sum_probs=66.7
Q ss_pred CccCCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChhHHHHHHHHHHHHHHcCChhHhhhhhhhcc
Q 019589 67 AIADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYDEIHG 137 (338)
Q Consensus 67 ~~~~d~Y~vLgv~~~as~~eIk~aYr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~G 137 (338)
....|||+||||+++++.++||++||+|+++||||++++++.+.+.|++|++||+||+||.+|..||.++.
T Consensus 17 ~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~ 87 (112)
T 2ctq_A 17 EDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRR 87 (112)
T ss_dssp CCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred cCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhh
Confidence 35689999999999999999999999999999999998778899999999999999999999999999864
No 11
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.79 E-value=1.6e-19 Score=147.27 Aligned_cols=70 Identities=36% Similarity=0.552 Sum_probs=66.3
Q ss_pred ccCCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChhHHHHHHHHHHHHHHcCChhHhhhhhhhcc
Q 019589 68 IADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYDEIHG 137 (338)
Q Consensus 68 ~~~d~Y~vLgv~~~as~~eIk~aYr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~G 137 (338)
...|||+||||+++++.++||++||+|+++||||++++++++.+.|+.|++||+||+||.+|..||.++.
T Consensus 15 ~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~ 84 (109)
T 2ctw_A 15 SGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGS 84 (109)
T ss_dssp CSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCH
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhcc
Confidence 4579999999999999999999999999999999998878899999999999999999999999999764
No 12
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.78 E-value=7.6e-20 Score=157.95 Aligned_cols=71 Identities=24% Similarity=0.408 Sum_probs=64.2
Q ss_pred CccCCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCh------hHHHHHHHHHHHHHHcCChhHhhhhhhhcc
Q 019589 67 AIADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDP------ETTNFCMFINEVYAVLSDPVQRMVYDEIHG 137 (338)
Q Consensus 67 ~~~~d~Y~vLgv~~~as~~eIk~aYr~l~~~~HPD~~~~~~------~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~G 137 (338)
....|||+||||+++++.++||++||+|++++|||+++..+ .+.+.|+.|++||+||+||.+|..||..+.
T Consensus 7 ~~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~ 83 (155)
T 2l6l_A 7 MPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRC 83 (155)
T ss_dssp CCCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHH
T ss_pred CCCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcc
Confidence 35679999999999999999999999999999999988753 367899999999999999999999998653
No 13
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.78 E-value=1.5e-19 Score=143.26 Aligned_cols=70 Identities=24% Similarity=0.458 Sum_probs=64.2
Q ss_pred CccCCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCC------hhHHHHHHHHHHHHHHcCChhHhhhhhhhc
Q 019589 67 AIADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDD------PETTNFCMFINEVYAVLSDPVQRMVYDEIH 136 (338)
Q Consensus 67 ~~~~d~Y~vLgv~~~as~~eIk~aYr~l~~~~HPD~~~~~------~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~ 136 (338)
....|||+||||+++++.++||++||+|+++||||+++.. +.+.+.|+.|++||+||+||.+|..||...
T Consensus 13 ~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l 88 (94)
T 1wjz_A 13 TLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQR 88 (94)
T ss_dssp SSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHS
T ss_pred CCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHc
Confidence 4567999999999999999999999999999999998743 457899999999999999999999999874
No 14
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.78 E-value=1.5e-19 Score=142.99 Aligned_cols=68 Identities=31% Similarity=0.512 Sum_probs=62.5
Q ss_pred ccCCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChhHHHHHHHHHHHHHHcCChhHhhhhhhhccc
Q 019589 68 IADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYDEIHGY 138 (338)
Q Consensus 68 ~~~d~Y~vLgv~~~as~~eIk~aYr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~G~ 138 (338)
...|||+||||+++++.++||++|++|+++||||+++++ .+.|++|++||++|+||.+|..||.++..
T Consensus 6 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~---~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~ 73 (92)
T 2o37_A 6 KETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGD---TEKFKEISEAFEILNDPQKREIYDQYGLE 73 (92)
T ss_dssp SCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCC---HHHHHHHHHHHHHHTSHHHHHHHHHHCHH
T ss_pred cCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCh---HHHHHHHHHHHHHHCCHHHHHHHHHHCHH
Confidence 457999999999999999999999999999999999773 56999999999999999999999997643
No 15
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.77 E-value=9.6e-20 Score=147.02 Aligned_cols=70 Identities=34% Similarity=0.519 Sum_probs=65.5
Q ss_pred cCCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChhHHHHHHHHHHHHHHcCChhHhhhhhhhccc
Q 019589 69 ADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYDEIHGY 138 (338)
Q Consensus 69 ~~d~Y~vLgv~~~as~~eIk~aYr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~G~ 138 (338)
..|||+||||++++|.++||++||+|+++||||++++.+++++.|++|++||++|+||.+|..||.++..
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~ 71 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHA 71 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTT
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhh
Confidence 4699999999999999999999999999999999987677899999999999999999999999998643
No 16
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.77 E-value=3.2e-19 Score=143.15 Aligned_cols=68 Identities=32% Similarity=0.468 Sum_probs=63.4
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCC-hhHHHHHHHHHHHHHHcCChhHhhhhhhhcc
Q 019589 70 DDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDD-PETTNFCMFINEVYAVLSDPVQRMVYDEIHG 137 (338)
Q Consensus 70 ~d~Y~vLgv~~~as~~eIk~aYr~l~~~~HPD~~~~~-~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~G 137 (338)
.|||+||||+++++.++||++|++|+++||||+++.. ..+.+.|+.|++||++|+||.+|..||.++.
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~ 70 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGR 70 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCc
Confidence 5899999999999999999999999999999999864 4578999999999999999999999999864
No 17
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.74 E-value=1e-18 Score=142.36 Aligned_cols=70 Identities=21% Similarity=0.290 Sum_probs=64.7
Q ss_pred ccCCcccccCCCCCC-CHHHHHHHHHHHHHhcCCCCCCC---ChhHHHHHHHHHHHHHHcCChhHhhhhhhhcc
Q 019589 68 IADDYYAVLGLLPDA-TPEQIKKAYYNCMKACHPDLSGD---DPETTNFCMFINEVYAVLSDPVQRMVYDEIHG 137 (338)
Q Consensus 68 ~~~d~Y~vLgv~~~a-s~~eIk~aYr~l~~~~HPD~~~~---~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~G 137 (338)
...|||+||||++++ +.++||++||+|+++||||++++ .+.+.+.|+.|++||++|+||.+|..||.++.
T Consensus 13 ~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~ 86 (109)
T 2qsa_A 13 GLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLD 86 (109)
T ss_dssp TTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred CCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence 467999999999999 99999999999999999999876 35578999999999999999999999999864
No 18
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.71 E-value=5.1e-18 Score=151.69 Aligned_cols=68 Identities=28% Similarity=0.502 Sum_probs=65.0
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChhHHHHHHHHHHHHHHcCChhHhhhhhhhcc
Q 019589 70 DDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYDEIHG 137 (338)
Q Consensus 70 ~d~Y~vLgv~~~as~~eIk~aYr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~G 137 (338)
.|||+||||+++++.++||+|||+|+++||||++++++++.+.|+.|++||++|+||.+|..||.+|.
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~ 69 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGE 69 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTT
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhcc
Confidence 58999999999999999999999999999999998778899999999999999999999999999864
No 19
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.71 E-value=5.1e-18 Score=133.73 Aligned_cols=62 Identities=21% Similarity=0.338 Sum_probs=58.2
Q ss_pred cCCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChhHHHHHHHHHHHHHHcCChhHhhh
Q 019589 69 ADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMV 131 (338)
Q Consensus 69 ~~d~Y~vLgv~~~as~~eIk~aYr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsdp~~R~~ 131 (338)
..|||+||||+++++.++||++||+|+++||||++.. +.+.+.|++|++||++|+||.+|..
T Consensus 26 ~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~ 87 (90)
T 2ys8_A 26 SKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVA-PGSEDAFKAVVNARTALLKNIKSGP 87 (90)
T ss_dssp CSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCC-TTHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHHCCcccccC
Confidence 4799999999999999999999999999999999986 6688999999999999999998874
No 20
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.69 E-value=2.9e-18 Score=150.44 Aligned_cols=66 Identities=27% Similarity=0.339 Sum_probs=58.2
Q ss_pred ccCCcccccCCCCCCC--HHHHHHHHHHHHHhcCCCCCCCChhHHHHHHHHHHHHHHcCChhHhhhhhhhcc
Q 019589 68 IADDYYAVLGLLPDAT--PEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYDEIHG 137 (338)
Q Consensus 68 ~~~d~Y~vLgv~~~as--~~eIk~aYr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~G 137 (338)
...|||+||||+++++ .++||+|||+|++++|||++++ ++.|++|++||++|+||.+|..||++|.
T Consensus 9 ~~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~----~e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 9 ESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp HHHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C----CTTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred ccccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 3469999999999998 6999999999999999999876 3689999999999999999999999874
No 21
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.67 E-value=5.6e-18 Score=139.22 Aligned_cols=66 Identities=27% Similarity=0.344 Sum_probs=60.6
Q ss_pred ccCCcccccCCCCCCCH--HHHHHHHHHHHHhcCCCCCCCChhHHHHHHHHHHHHHHcCChhHhhhhhhhcc
Q 019589 68 IADDYYAVLGLLPDATP--EQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYDEIHG 137 (338)
Q Consensus 68 ~~~d~Y~vLgv~~~as~--~eIk~aYr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~G 137 (338)
...+||+||||+++++. ++||++||+|+++||||++++ .+.|++|++||+||+||.+|..||.++.
T Consensus 6 ~~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~----~e~f~~I~~AYevL~d~~~R~~~~~~~~ 73 (114)
T 1gh6_A 6 ESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDFGG 73 (114)
T ss_dssp HHHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT----TTTTHHHHHHHHHHHHHHHSCCSSCCSC
T ss_pred hhhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc----HHHHHHHHHHHHHHCCHHHHHHhhhccc
Confidence 34689999999999999 999999999999999999876 4789999999999999999999998753
No 22
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.67 E-value=3.5e-17 Score=144.06 Aligned_cols=68 Identities=25% Similarity=0.362 Sum_probs=61.4
Q ss_pred ccCCcccccCCCCCCC--HHHHHHHHHHHHHhcCCCCCCCChh-----HHHHHHHHHHHHHHcCChhHhhhhhhh
Q 019589 68 IADDYYAVLGLLPDAT--PEQIKKAYYNCMKACHPDLSGDDPE-----TTNFCMFINEVYAVLSDPVQRMVYDEI 135 (338)
Q Consensus 68 ~~~d~Y~vLgv~~~as--~~eIk~aYr~l~~~~HPD~~~~~~~-----a~~~f~~i~~Ay~vLsdp~~R~~YD~~ 135 (338)
...|||+||||+++++ ..+||++||+|+++||||++++.+. +.+.|..|++||+||+||.+|..||..
T Consensus 2 ~~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~ 76 (174)
T 3hho_A 2 NAMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLS 76 (174)
T ss_dssp --CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred CCCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHH
Confidence 3579999999999987 9999999999999999999887543 668999999999999999999999975
No 23
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.65 E-value=8e-17 Score=145.40 Aligned_cols=81 Identities=15% Similarity=0.303 Sum_probs=67.2
Q ss_pred cceecccCCCCCCccCCcccccCCCCC--CCHHHHHHHHHHHHHhcCCCCCCCChh-----HHHHHHHHHHHHHHcCChh
Q 019589 55 ARVTAEDSASTDAIADDYYAVLGLLPD--ATPEQIKKAYYNCMKACHPDLSGDDPE-----TTNFCMFINEVYAVLSDPV 127 (338)
Q Consensus 55 ~~~~~~~~~~~~~~~~d~Y~vLgv~~~--as~~eIk~aYr~l~~~~HPD~~~~~~~-----a~~~f~~i~~Ay~vLsdp~ 127 (338)
+.|..+....+.....|||+||||+++ ++..+||++||+|+++||||++++.+. +.+.|+.||+||+||+||.
T Consensus 28 ~fC~~c~~~q~~~~~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~ 107 (207)
T 3bvo_A 28 FFCPQCRALQAPDPTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPL 107 (207)
T ss_dssp CBCTTTCCBCCCCTTCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHH
T ss_pred cccccccccCCCCCCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHH
Confidence 344444444444456899999999986 799999999999999999999987532 4578999999999999999
Q ss_pred Hhhhhhhh
Q 019589 128 QRMVYDEI 135 (338)
Q Consensus 128 ~R~~YD~~ 135 (338)
+|..||..
T Consensus 108 ~R~~Yd~~ 115 (207)
T 3bvo_A 108 SRGLYLLK 115 (207)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999964
No 24
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.65 E-value=2.9e-17 Score=128.94 Aligned_cols=67 Identities=12% Similarity=0.044 Sum_probs=59.7
Q ss_pred CCccCCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCh-hHHHHHHHHHHHHHHcCChhHhhhh
Q 019589 66 DAIADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDP-ETTNFCMFINEVYAVLSDPVQRMVY 132 (338)
Q Consensus 66 ~~~~~d~Y~vLgv~~~as~~eIk~aYr~l~~~~HPD~~~~~~-~a~~~f~~i~~Ay~vLsdp~~R~~Y 132 (338)
.....++|+||||++++|.++||++||+|+++||||+++++. .+++.|+.|++||++|+|...|..+
T Consensus 12 ~~~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r~~~ 79 (88)
T 1iur_A 12 GSILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFLDQN 79 (88)
T ss_dssp SSCHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTCSSS
T ss_pred CccHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 345679999999999999999999999999999999998863 4789999999999999999877443
No 25
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.65 E-value=5e-17 Score=125.09 Aligned_cols=62 Identities=16% Similarity=0.252 Sum_probs=56.4
Q ss_pred ccCCcccccCCCCC--CCHHHHHHHHHHHHHhcCCCCCCCChhHHHHHHHHHHHHHHcCChhHhhhhh
Q 019589 68 IADDYYAVLGLLPD--ATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYD 133 (338)
Q Consensus 68 ~~~d~Y~vLgv~~~--as~~eIk~aYr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD 133 (338)
...++|+||||+++ ++.++||++||+|+++||||++++ .+.|++|++||++|+|+.+|..++
T Consensus 9 ~~~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~----~~~f~~i~~AYe~L~~~~~r~~~~ 72 (79)
T 1faf_A 9 DKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS----HALMQELNSLWGTFKTEVYNLRMN 72 (79)
T ss_dssp HHHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC----HHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHHhhHHHHHHHh
Confidence 34689999999999 999999999999999999999764 578999999999999999998743
No 26
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.65 E-value=1.1e-17 Score=160.92 Aligned_cols=69 Identities=32% Similarity=0.535 Sum_probs=0.0
Q ss_pred CccCCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChhHHHHHHHHHHHHHHcCChhHhhhhhhhc
Q 019589 67 AIADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYDEIH 136 (338)
Q Consensus 67 ~~~~d~Y~vLgv~~~as~~eIk~aYr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~ 136 (338)
....|||+||||+++||.++||+|||+|+++||||++++ +.+++.|++|++||++|+||.+|..||+++
T Consensus 25 m~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~-~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~ 93 (329)
T 3lz8_A 25 MELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKE-NDAEAKFKDLAEAWEVLKDEQRRAEYDQLW 93 (329)
T ss_dssp ----------------------------------------------------------------------
T ss_pred ccccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCC-hHHHHHHHHHHHHHHHhhhhhhhcccchhh
Confidence 345799999999999999999999999999999999986 578999999999999999999999999974
No 27
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.64 E-value=8.5e-17 Score=141.17 Aligned_cols=66 Identities=20% Similarity=0.364 Sum_probs=60.8
Q ss_pred CCcccccCCCCCC--CHHHHHHHHHHHHHhcCCCCCCCChh-----HHHHHHHHHHHHHHcCChhHhhhhhhh
Q 019589 70 DDYYAVLGLLPDA--TPEQIKKAYYNCMKACHPDLSGDDPE-----TTNFCMFINEVYAVLSDPVQRMVYDEI 135 (338)
Q Consensus 70 ~d~Y~vLgv~~~a--s~~eIk~aYr~l~~~~HPD~~~~~~~-----a~~~f~~i~~Ay~vLsdp~~R~~YD~~ 135 (338)
.|||+||||++++ |..+||++||+|+++||||++++.+. +.+.|..||+||+||+||.+|..||..
T Consensus 1 ~d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~ 73 (171)
T 1fpo_A 1 MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLS 73 (171)
T ss_dssp CHHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHH
Confidence 3899999999999 99999999999999999999987543 457999999999999999999999986
No 28
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.61 E-value=1.7e-16 Score=140.14 Aligned_cols=64 Identities=25% Similarity=0.463 Sum_probs=59.6
Q ss_pred cCCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChh---HHHHHHHHHHHHHHcCChhHhhhh
Q 019589 69 ADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPE---TTNFCMFINEVYAVLSDPVQRMVY 132 (338)
Q Consensus 69 ~~d~Y~vLgv~~~as~~eIk~aYr~l~~~~HPD~~~~~~~---a~~~f~~i~~Ay~vLsdp~~R~~Y 132 (338)
..|||+||||+++++.++||++||+|+++||||++.+.+. +++.|+.|++||+||+|+.+|..|
T Consensus 116 ~~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 116 GETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp TCCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred ccchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 3699999999999999999999999999999999987543 789999999999999999999987
No 29
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.58 E-value=4.1e-16 Score=117.50 Aligned_cols=59 Identities=24% Similarity=0.251 Sum_probs=52.4
Q ss_pred CccCCcccccCCCC-CCCHHHHHHHHHHHHHhcCCCCCCCChhHHHHHHHHHHHHHHcCChhHh
Q 019589 67 AIADDYYAVLGLLP-DATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQR 129 (338)
Q Consensus 67 ~~~~d~Y~vLgv~~-~as~~eIk~aYr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsdp~~R 129 (338)
....++|+||||++ ++|.++||++||+|++++|||+++. .+.|++|++||++|+|+..|
T Consensus 11 m~~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g~----~~~f~~i~~Aye~L~~~~~r 70 (71)
T 2guz_A 11 MNSKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGS----PFLATKINEAKDFLEKRGIS 70 (71)
T ss_dssp CCHHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTCC----HHHHHHHHHHHHHHHHHCCC
T ss_pred CCHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC----HHHHHHHHHHHHHHhhhhhc
Confidence 34568999999999 7999999999999999999999643 46999999999999998665
No 30
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.57 E-value=4.3e-16 Score=123.07 Aligned_cols=56 Identities=23% Similarity=0.425 Sum_probs=51.6
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCh---hHHHHHHHHHHHHHHcCC
Q 019589 70 DDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDP---ETTNFCMFINEVYAVLSD 125 (338)
Q Consensus 70 ~d~Y~vLgv~~~as~~eIk~aYr~l~~~~HPD~~~~~~---~a~~~f~~i~~Ay~vLsd 125 (338)
.++|++|||++++|.++||+|||+++++||||++++++ .+++.|+.|++||+||.+
T Consensus 33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 58999999999999999999999999999999998754 378899999999999964
No 31
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.56 E-value=8.8e-16 Score=135.86 Aligned_cols=65 Identities=22% Similarity=0.425 Sum_probs=59.6
Q ss_pred ccCCccccc------CCCC-CCCHHHHHHHHHHHHHhcCCCCCCCChhHHHHHHHHHHHHHHcCChhHhhhhhhh
Q 019589 68 IADDYYAVL------GLLP-DATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYDEI 135 (338)
Q Consensus 68 ~~~d~Y~vL------gv~~-~as~~eIk~aYr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~ 135 (338)
...|||+|| |+++ ++|..+||++||+|+++||||++++ +.+.|+.|++||+||+||.+|..||..
T Consensus 9 ~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~---a~~~f~~i~~AY~vL~dp~~R~~Yd~~ 80 (181)
T 3uo3_A 9 FTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ---GSEQSSTLNQAYHTLKDPLRRSQYMLK 80 (181)
T ss_dssp CSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS---CSSGGGSHHHHHHHHHSHHHHHHHHHH
T ss_pred CCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc---HHHHHHHHHHHHHHHcChHHHHHHHHH
Confidence 457999999 4665 8999999999999999999999887 678899999999999999999999985
No 32
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.54 E-value=1.4e-15 Score=123.36 Aligned_cols=59 Identities=12% Similarity=0.160 Sum_probs=52.1
Q ss_pred ccCCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCC---Ch----hHHHHHHHHHHHHHHcCChh
Q 019589 68 IADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGD---DP----ETTNFCMFINEVYAVLSDPV 127 (338)
Q Consensus 68 ~~~d~Y~vLgv~~~as~~eIk~aYr~l~~~~HPD~~~~---~~----~a~~~f~~i~~Ay~vLsdp~ 127 (338)
...|||+|||++. +|.++||+|||+|+++||||++++ ++ .+++.|+.|++||++|+|+.
T Consensus 39 ~~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 39 SGSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp TTSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred ccCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 4579999999996 999999999999999999999763 11 36889999999999999985
No 33
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.50 E-value=1.7e-15 Score=159.64 Aligned_cols=71 Identities=27% Similarity=0.466 Sum_probs=40.7
Q ss_pred CccCCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChhHHHHHHHHHHHHHHcCChhHhhhhhhhcc
Q 019589 67 AIADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYDEIHG 137 (338)
Q Consensus 67 ~~~~d~Y~vLgv~~~as~~eIk~aYr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~G 137 (338)
....|||+||||++++|.++||+|||+|+++||||++++++.+.+.|++|++||++|+||.+|..||++|.
T Consensus 18 ~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~ 88 (780)
T 3apo_A 18 RHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGE 88 (780)
T ss_dssp -----CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC--
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhcc
Confidence 35679999999999999999999999999999999998778889999999999999999999999999864
No 34
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.89 E-value=1e-09 Score=104.85 Aligned_cols=65 Identities=32% Similarity=0.490 Sum_probs=55.7
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCC---hhHHHHHHHHHHHHHHcCChhHhhhhhh
Q 019589 70 DDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDD---PETTNFCMFINEVYAVLSDPVQRMVYDE 134 (338)
Q Consensus 70 ~d~Y~vLgv~~~as~~eIk~aYr~l~~~~HPD~~~~~---~~a~~~f~~i~~Ay~vLsdp~~R~~YD~ 134 (338)
.++|.+||+...++.++|+++|+++++++|||+.+.. ..+.+.|+.|++||++|+||.+|..||+
T Consensus 382 ~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~ 449 (450)
T 2y4t_A 382 RDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD 449 (450)
T ss_dssp CCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred hhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence 4899999999999999999999999999999998763 2478899999999999999999999997
No 35
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.89 E-value=1.3e-09 Score=80.40 Aligned_cols=53 Identities=9% Similarity=0.101 Sum_probs=46.1
Q ss_pred CCcccccCCCCC---CCHHHHHHHHHHHHHhcCCCCCCCChhHHHHHHHHHHHHHHcCCh
Q 019589 70 DDYYAVLGLLPD---ATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDP 126 (338)
Q Consensus 70 ~d~Y~vLgv~~~---as~~eIk~aYr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsdp 126 (338)
.+.|.||||+++ ++.++|+++||+|+..+|||+.+. .-.+..|++|+++|...
T Consensus 4 ~EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS----~yl~~ki~~Ake~l~~~ 59 (65)
T 2guz_B 4 DESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGS----FYLQSKVYRAAERLKWE 59 (65)
T ss_dssp HHHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCC----HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCC----HHHHHHHHHHHHHHHHH
Confidence 357899999999 999999999999999999999755 45667899999998543
No 36
>1iqz_A Ferredoxin; iron-sulfer protein, ultlahigh resolution analysis, geometry of [4Fe-4S] cluster, electron transport; 0.92A {Bacillus thermoproteolyticus} SCOP: d.58.1.4 PDB: 1ir0_A 1wtf_A*
Probab=98.47 E-value=7.9e-08 Score=72.86 Aligned_cols=60 Identities=32% Similarity=0.592 Sum_probs=47.7
Q ss_pred ccccCcccccCCCCccCCCCccceeccccCceeeccC---------CCCHHHHHHHHHhCCCCcEEEecC
Q 019589 155 HVFVDEFSCIGCKNCNNVAPEVFKIEEDFGRARVYNQ---------CGINEFVQQAIESCPVDCIHRTSA 215 (338)
Q Consensus 155 ~v~vDe~~CiGCg~C~~vap~vF~iddd~G~a~v~~q---------~g~~e~v~~Av~~CP~~aI~~~~~ 215 (338)
.+.+|...|+|||.|..+||+.|.++++ |.+.+..+ .+....+..++..||++||++...
T Consensus 3 ~v~vd~~~CigCg~C~~~CP~~~~~~~~-g~~~~~~~~~~~~~~~~~~~c~~C~~C~~~CP~~AI~~~~~ 71 (81)
T 1iqz_A 3 YTIVDKETCIACGACGAAAPDIYDYDED-GIAYVTLDDNQGIVEVPDILIDDMMDAFEGCPTDSIKVADE 71 (81)
T ss_dssp EEEECTTTCCCCSHHHHHCTTTEEECTT-SCEEETTTTTSSCSCCCGGGHHHHHHHHHHCTTCCEEEESS
T ss_pred EEEEecccCcccChhhHhCchheeeCCC-CeEEEeccCccccCCCCHHHHHHHHHHHHhCCHhHEEEecC
Confidence 4678999999999999999999998754 66665532 123456788999999999999765
No 37
>1dax_A Ferredoxin I; electron transport, electron-transfer protein, 4Fe-4S cluster; NMR {Desulfovibrio africanus} SCOP: d.58.1.4 PDB: 1dfd_A 1fxr_A
Probab=98.27 E-value=4.7e-07 Score=65.04 Aligned_cols=60 Identities=33% Similarity=0.776 Sum_probs=47.8
Q ss_pred ccccCcccccCCCCccCCCCccceeccccCceeeccC-CCCHHHHHHHHHhCCCCcEEEec
Q 019589 155 HVFVDEFSCIGCKNCNNVAPEVFKIEEDFGRARVYNQ-CGINEFVQQAIESCPVDCIHRTS 214 (338)
Q Consensus 155 ~v~vDe~~CiGCg~C~~vap~vF~iddd~G~a~v~~q-~g~~e~v~~Av~~CP~~aI~~~~ 214 (338)
.+.+|...|+|||.|..+||+.|.++++.|...++.. .+.......++..||++||++.+
T Consensus 3 ~~~id~~~C~~Cg~C~~~CP~~~~~~~~~~~~~~~~~~~~~C~~C~~C~~~CP~~Ai~~~~ 63 (64)
T 1dax_A 3 KFYVDQDECIACESCVEIAPGAFAMDPEIEKAYVKDVEGASQEEVEEAMDTCPVQCIHWED 63 (64)
T ss_dssp CCEECSTTCCSCCHHHHHCTTTEEECSSSSSEEECCGGGSCHHHHHHHHHHSSSCCEECCC
T ss_pred EEEEccccCCCchHHHHhCCccEeEcCCCCEEEEecCCCcchhHHHHHHHhCCHhhEeeec
Confidence 3568889999999999999999988766466655532 34556788999999999999864
No 38
>1rof_A Ferredoxin; electron transport, iron-sulfur; NMR {Thermotoga maritima} SCOP: d.58.1.4 PDB: 1vjw_A
Probab=98.15 E-value=1.7e-06 Score=60.84 Aligned_cols=58 Identities=36% Similarity=0.701 Sum_probs=43.2
Q ss_pred cccCcccccCCCCccCCCCccceeccccCceeeccCCCCHHHHHHHHHhCCCCcEEEec
Q 019589 156 VFVDEFSCIGCKNCNNVAPEVFKIEEDFGRARVYNQCGINEFVQQAIESCPVDCIHRTS 214 (338)
Q Consensus 156 v~vDe~~CiGCg~C~~vap~vF~iddd~G~a~v~~q~g~~e~v~~Av~~CP~~aI~~~~ 214 (338)
+.+|...|++|+.|..++|..|.++++ |...+....+.......++..||++||++.+
T Consensus 3 ~~i~~~~C~~C~~C~~~Cp~~~~~~~~-~~~~~~~~~~~c~~C~~C~~~CP~~Ai~~~~ 60 (60)
T 1rof_A 3 VRVDADACIGCGVCENLCPDVFQLGDD-GKAKVLQPETDLPCAKDAADSCPTGAISVEE 60 (60)
T ss_dssp SEECTTTCCSCCSSTTTCTTTBCCCSS-SCCCBSCSSCCSTTHHHHHHHCTTCCEECCC
T ss_pred EEEchhhCCCChHHHHhCcHHHeECCC-CCEeecCchhhHHHHHHHHHhCCHhHEEEeC
Confidence 567889999999999999998887654 5444442223334466899999999998753
No 39
>1sj1_A Ferredoxin; thermostability, iron-sulfur cluster, hexammine cobalt(III), electron transport; HET: NCO; 1.50A {Pyrococcus furiosus} SCOP: d.58.1.4 PDB: 1siz_A* 2z8q_A 3pni_A
Probab=98.08 E-value=1.4e-06 Score=62.42 Aligned_cols=58 Identities=31% Similarity=0.626 Sum_probs=44.5
Q ss_pred cccCcccccCCCCccCCCCccceeccccCceeeccCC-CC---HHHHHHHHHhCCCCcEEEec
Q 019589 156 VFVDEFSCIGCKNCNNVAPEVFKIEEDFGRARVYNQC-GI---NEFVQQAIESCPVDCIHRTS 214 (338)
Q Consensus 156 v~vDe~~CiGCg~C~~vap~vF~iddd~G~a~v~~q~-g~---~e~v~~Av~~CP~~aI~~~~ 214 (338)
+.+|...|+|||.|...||..|.++++ |...++... .+ ......+++.||++||.+.+
T Consensus 4 ~~id~~~C~~C~~C~~~Cp~~~~~~~~-~~~~~~~~~~~~~~~c~~c~~C~~~CP~~Ai~~~~ 65 (66)
T 1sj1_A 4 VSVDQDTCIGDAICASLCPDVFEMNDE-GKAQPKVEVIEDEELYNCAKEAMEACPVSAITIEE 65 (66)
T ss_dssp EEECTTTCCCCCHHHHHCTTTEEECTT-SCEEESCSCBCCHHHHHHHHHHHHHCTTCCEEEEE
T ss_pred EEECcccCcCchHHHHhCCceEEECCC-CceeecccCCCcHHHHHHHHHHHhhCCHhhEEEec
Confidence 568889999999999999998888644 555555432 22 23567899999999999864
No 40
>1dwl_A Ferredoxin I; electron transfer, model, heteronuclear docking; HET: HEC; NMR {Desulfomicrobium norvegicum} SCOP: i.4.1.1
Probab=98.03 E-value=1.8e-06 Score=60.43 Aligned_cols=58 Identities=34% Similarity=0.716 Sum_probs=42.3
Q ss_pred cccCcccccCCCCccCCCCccceeccccCceeeccCCCCHHHHHHHHHhCCCCcEEEe
Q 019589 156 VFVDEFSCIGCKNCNNVAPEVFKIEEDFGRARVYNQCGINEFVQQAIESCPVDCIHRT 213 (338)
Q Consensus 156 v~vDe~~CiGCg~C~~vap~vF~iddd~G~a~v~~q~g~~e~v~~Av~~CP~~aI~~~ 213 (338)
+.+|...|++|+.|..++|..|.++++.|...+....+.......++..||++||+++
T Consensus 2 i~i~~~~C~~C~~C~~~Cp~~~~~~~~~~~~~~~~~~~~c~~C~~C~~~CP~~Ai~~~ 59 (59)
T 1dwl_A 2 IVIDHEECIGCESCVELCPEVFAMIDGEEKAMVTAPDSTAECAQDAIDACPVEAISKE 59 (59)
T ss_dssp EEESSCCCSSCCGGGGTSTTTEEEEECSSCEEESCTTCCCGGGGTGGGGSTTCCEEEC
T ss_pred eEEChhhCcChhHHHHHCCHHheecCCCCcEEEecChhhhhHHHHHHHhCCHhhEEcC
Confidence 4678899999999999999888883333655552222233345578999999999874
No 41
>1f2g_A Ferredoxin II; electron transport, FDII desulfovibrio gigas; NMR {Desulfovibrio gigas} SCOP: d.58.1.4 PDB: 1fxd_A
Probab=97.90 E-value=3.7e-06 Score=58.93 Aligned_cols=55 Identities=33% Similarity=0.710 Sum_probs=42.2
Q ss_pred cccCcccccCCCCccCCCCccceeccccCceeecc-CCCCHHHHHHHHHhCCCCcEEE
Q 019589 156 VFVDEFSCIGCKNCNNVAPEVFKIEEDFGRARVYN-QCGINEFVQQAIESCPVDCIHR 212 (338)
Q Consensus 156 v~vDe~~CiGCg~C~~vap~vF~iddd~G~a~v~~-q~g~~e~v~~Av~~CP~~aI~~ 212 (338)
+.+| ..|++||.|..++|..|.++++ |...++. ..........+++.||++||.+
T Consensus 2 v~id-~~C~~C~~C~~~CP~~~~~~~~-~~~~~~~~~~~~C~~C~~C~~~CP~~Ai~~ 57 (58)
T 1f2g_A 2 IEVN-DDCMACEACVEICPDVFEMNEE-GDKAVVINPDSDLDCVEEAIDSCPAEAIVR 57 (58)
T ss_dssp CBCT-TTCCCCCHHHHHCTTTEEECSS-SSSEEESCTTCCSTHHHHHHHTCSSCCCBC
T ss_pred cEEC-CcCccchHHHHhCCccEEECCC-CcEEEeCCCccchHHHHHHHhhCChhhEEe
Confidence 4678 8999999999999998887654 5544444 2334456788999999999976
No 42
>1rgv_A Ferredoxin; electron transport; 2.90A {Thauera aromatica} SCOP: d.58.1.1
Probab=97.07 E-value=0.00034 Score=52.21 Aligned_cols=65 Identities=20% Similarity=0.317 Sum_probs=41.6
Q ss_pred ccCcccccCCCCccCCCC-ccceeccccCceeeccCCCCHHHHH------HHHHhCCCCcEEEecCcchhhhHHHHH
Q 019589 157 FVDEFSCIGCKNCNNVAP-EVFKIEEDFGRARVYNQCGINEFVQ------QAIESCPVDCIHRTSAQQLSLLEDEMR 226 (338)
Q Consensus 157 ~vDe~~CiGCg~C~~vap-~vF~iddd~G~a~v~~q~g~~e~v~------~Av~~CP~~aI~~~~~~~~~~Le~~~~ 226 (338)
+++...|++|+.|..+|| +.+.++++ .. .+.. ....... ..+..||++||++......+ .+.++.
T Consensus 2 ~~~~~~C~~C~~C~~~CP~~ai~~~~~--~~-~~~~-~~C~~C~~~~~~~~C~~~CP~~Ai~~~~~~~~~-~~~~~~ 73 (80)
T 1rgv_A 2 LYINDDCTACDACVEECPNEAITPGDP--IY-VIDP-TKCSECVGAFDEPQCRLVCPADCIPDNPDYRET-REELQE 73 (80)
T ss_dssp BCCCSCCCCCCTTTTTCTTCCEECCSS--SC-EECT-TTCCTTTTTCSSCHHHHHCSSCCCCBCGGGCCC-HHHHHH
T ss_pred eEeCCCCcChhhHHHHcChhccCcCCC--ee-EEcc-hhCcCCCCcCCccHHHHhcCcccEEecCCcccC-HHHHHH
Confidence 467789999999999999 66777543 21 2211 1111233 67999999999987654333 344443
No 43
>1xer_A Ferredoxin; electron transport, iron-sulfur, duplication; 2.00A {Sulfolobus tokodaii str} SCOP: d.58.1.3 PDB: 2vkr_A
Probab=97.04 E-value=6.7e-05 Score=58.74 Aligned_cols=60 Identities=27% Similarity=0.330 Sum_probs=40.5
Q ss_pred ccccCcccccCCCCccCCCC-ccceeccccCcee-----eccCCCCHHHHHHHHHhCCCCcEEEec
Q 019589 155 HVFVDEFSCIGCKNCNNVAP-EVFKIEEDFGRAR-----VYNQCGINEFVQQAIESCPVDCIHRTS 214 (338)
Q Consensus 155 ~v~vDe~~CiGCg~C~~vap-~vF~iddd~G~a~-----v~~q~g~~e~v~~Av~~CP~~aI~~~~ 214 (338)
.+.+|...|++||.|..+|| ..|.++++.|... +............++..||++||.+..
T Consensus 37 ~~~id~~~C~~Cg~C~~~CP~~ai~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~~CP~~Ai~~~~ 102 (103)
T 1xer_A 37 IVGVDFDLCIADGSCINACPVNVFQWYDTPGHPASEKKADPVNEQACIFCMACVNVCPVAAIDVKP 102 (103)
T ss_dssp SEEEETTTCCCCCHHHHHCTTCCCEEEECTTCSSCSEEEECTTGGGCCCCCHHHHHCTTCCEEECC
T ss_pred eEEEehhhCCChhhHHHHcCccCeecccccCccccccceeecCcccccChhhHHHhccccceEecC
Confidence 46789999999999999999 7787765433211 111111111234689999999999864
No 44
>2fgo_A Ferredoxin; allochromatium vinosum, [4Fe-4S] cluster, reduction potential, iron binding protein electron transport; 1.32A {Pseudomonas aeruginosa}
Probab=97.03 E-value=0.00042 Score=51.99 Aligned_cols=67 Identities=25% Similarity=0.418 Sum_probs=43.2
Q ss_pred ccCcccccCCCCccCCCC-ccceeccccCceeeccCCCCHHHHH------HHHHhCCCCcEEEecCcchhhhHHHHHHH
Q 019589 157 FVDEFSCIGCKNCNNVAP-EVFKIEEDFGRARVYNQCGINEFVQ------QAIESCPVDCIHRTSAQQLSLLEDEMRRV 228 (338)
Q Consensus 157 ~vDe~~CiGCg~C~~vap-~vF~iddd~G~a~v~~q~g~~e~v~------~Av~~CP~~aI~~~~~~~~~~Le~~~~~~ 228 (338)
+++...|++|+.|..+|| +.+.++++ .. .+.. ....... ..+..||++||.+......+ ++.++..+
T Consensus 2 ~~~~~~C~~C~~C~~~CP~~ai~~~~~--~~-~~~~-~~C~~C~~~~~~~~C~~~CP~~Ai~~~~~~~~~-~~~~~~~~ 75 (82)
T 2fgo_A 2 LKITDDCINCDVCEPECPNGAISQGEE--IY-VIDP-NLCTECVGHYDEPQCQQVCPVDCIPLDDANVES-KDQLMEKY 75 (82)
T ss_dssp BCCCTTCCCCCTTGGGCTTCCEEECSS--SE-EECT-TTCCTTTTTCSSCHHHHHCTTCCCCBCTTSCCC-HHHHHHHH
T ss_pred ceeCCCCCChhhHHHHCChhccCCCCC--eE-EEEc-hhCccCCCcCCCCHhHhhCCcccEEccCCCccC-HHHHHHHH
Confidence 467789999999999999 66777543 22 2221 1111222 67999999999997654444 35555443
No 45
>3eun_A Ferredoxin; electron transport, [4Fe-4S] cluster, 4Fe-4S, iron, iron-sulfur, metal-binding, transport; 1.05A {Allochromatium vinosum} SCOP: d.58.1.1 PDB: 1blu_A 3exy_A
Probab=96.78 E-value=0.00067 Score=50.96 Aligned_cols=55 Identities=22% Similarity=0.468 Sum_probs=37.3
Q ss_pred ccCcccccCCCCccCCCCc-cceeccccCceeeccCCCCHHHHH------HHHHhCCCCcEEEecC
Q 019589 157 FVDEFSCIGCKNCNNVAPE-VFKIEEDFGRARVYNQCGINEFVQ------QAIESCPVDCIHRTSA 215 (338)
Q Consensus 157 ~vDe~~CiGCg~C~~vap~-vF~iddd~G~a~v~~q~g~~e~v~------~Av~~CP~~aI~~~~~ 215 (338)
++|...|++|+.|..+||. .+.++++ ...+... ...... ..+..||++||.+...
T Consensus 2 ~~~~~~C~~C~~C~~~CP~~ai~~~~~--~~~i~~~--~C~~C~~~~~~~~C~~~CP~~Ai~~~~~ 63 (82)
T 3eun_A 2 LMITDECINCDVCEPECPNGAISQGDE--TYVIEPS--LCTECVGHYETSQCVEVCPVDAIIKDPS 63 (82)
T ss_dssp EEECTTCCCCCTTGGGCTTCCEEECSS--SEEECGG--GCCTTTTTCSSCHHHHHCTTCCEEECGG
T ss_pred eEeCCCCcCccchHHHCChhheEcCCC--ceEEchh--hcCCCCCCCCccHHHHhCCccceEEcCC
Confidence 4678899999999999994 6666442 2222111 111222 6799999999999755
No 46
>1jb0_C Photosystem I iron-sulfur center; membrane protein, multiprotein-pigment complex, photosynthes; HET: CL1 PQN BCR LHG LMG; 2.50A {Synechococcus elongatus} SCOP: d.58.1.2 PDB: 3pcq_C* 1k0t_A 2wsc_C* 2wse_C* 2wsf_C* 3lw5_C* 2o01_C*
Probab=96.66 E-value=0.00012 Score=54.29 Aligned_cols=60 Identities=20% Similarity=0.326 Sum_probs=39.7
Q ss_pred cccCcccccCCCCccCCCC-ccceeccccCc-e-ee--ccCCCCHHHHHHHHHhCCCCcEEEecC
Q 019589 156 VFVDEFSCIGCKNCNNVAP-EVFKIEEDFGR-A-RV--YNQCGINEFVQQAIESCPVDCIHRTSA 215 (338)
Q Consensus 156 v~vDe~~CiGCg~C~~vap-~vF~iddd~G~-a-~v--~~q~g~~e~v~~Av~~CP~~aI~~~~~ 215 (338)
++++...|++|+.|..+|| +.|.+++..|. . .+ ....+.......++..||++||.+...
T Consensus 3 ~~~~~~~C~~Cg~C~~~CP~~a~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~~CP~~ai~~~~~ 67 (80)
T 1jb0_C 3 TVKIYDTCIGCTQCVRACPTDVLEMVPWDGCKAGQIASSPRTEDCVGCKRCETACPTDFLSIRVY 67 (80)
T ss_dssp EEEEETTCCCCCHHHHHCTTCCCEEEECSSSTTSEEEECTTGGGCCCCCHHHHHCCSSSCSEEEE
T ss_pred CcccCCcCcChhHHHHHCCcccccccccccccccccccCCCCCcCcCcCChhhhCCCCccEeeee
Confidence 4567889999999999999 77877653331 1 11 111111123346899999999988644
No 47
>2zvs_A Uncharacterized ferredoxin-like protein YFHL; electron transport, [4Fe-4S] clusters, iron-SULF clusters, reduction potential; 1.65A {Escherichia coli}
Probab=96.65 E-value=0.00089 Score=50.62 Aligned_cols=67 Identities=16% Similarity=0.343 Sum_probs=42.1
Q ss_pred ccCcccccCCCCccCCCC-ccceeccccCceeeccCCCCHHHHH------HHHHhCCC-CcEEEecCcchhhhHHHHHHH
Q 019589 157 FVDEFSCIGCKNCNNVAP-EVFKIEEDFGRARVYNQCGINEFVQ------QAIESCPV-DCIHRTSAQQLSLLEDEMRRV 228 (338)
Q Consensus 157 ~vDe~~CiGCg~C~~vap-~vF~iddd~G~a~v~~q~g~~e~v~------~Av~~CP~-~aI~~~~~~~~~~Le~~~~~~ 228 (338)
+++...|++|+.|..+|| +.+.++++ ...+... ...... ..+..||+ +||.+......++ +.++..+
T Consensus 2 ~~~~~~C~~C~~C~~~CP~~ai~~~~~--~~~~~~~--~C~~C~~~~~~~~C~~~CP~~~Ai~~~~~~~~~~-~~~~~~~ 76 (85)
T 2zvs_A 2 LLITKKCINCDMCEPECPNEAISMGDH--IYEINSD--KCTECVGHYETPTCQKVCPIPNTIVKDPAHVETE-EQLWDKF 76 (85)
T ss_dssp EEECTTCCCCCTTTTTCTTCCEECCSS--SCEECGG--GCCTTTTTCSSCHHHHHCSSCCEEECTTSCCCHH-HHHHHHH
T ss_pred EEeCCcCcChhHHHHHCchhccCcCCC--ceEEeCh--hccCCCCcCCccHhhHhCcCCCCEEecCCCCCCH-HHHHHHH
Confidence 467789999999999999 56666543 2111111 001122 67999999 9999976544443 4444443
No 48
>1jnr_B Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.1.5 PDB: 1jnz_B* 2fja_B* 2fjb_B* 2fjd_B* 2fje_B*
Probab=96.22 E-value=0.0017 Score=54.97 Aligned_cols=62 Identities=19% Similarity=0.429 Sum_probs=42.8
Q ss_pred cccCcccccCCC-----CccCCCC-ccceeccccCceeeccCCCCHHHHHHHHHhCCCCcEEEecCcch
Q 019589 156 VFVDEFSCIGCK-----NCNNVAP-EVFKIEEDFGRARVYNQCGINEFVQQAIESCPVDCIHRTSAQQL 218 (338)
Q Consensus 156 v~vDe~~CiGCg-----~C~~vap-~vF~iddd~G~a~v~~q~g~~e~v~~Av~~CP~~aI~~~~~~~~ 218 (338)
+++|...|++|+ .|..+|| +.+.++++.+...++.. +.......++..||++||.+....+.
T Consensus 3 ~~vd~~~C~~C~~~~~~~C~~~CP~~ai~~~~~~~~~~~id~-~~C~~Cg~Cv~~CP~~AI~~~~~~~~ 70 (150)
T 1jnr_B 3 SFVNPEKCDGCKALERTACEYICPNDLMTLDKEKMKAYNREP-DMCWECYSCVKMCPQGAIDVRGYVDY 70 (150)
T ss_dssp EEECTTTCCSCCSSSSCHHHHHCTTSCEEEETTTTEEEESCG-GGCCCCCHHHHHCTTCCEEECCCTTT
T ss_pred eEECcccCCCCCCcccccchhhcCccCeEEecCCceeeeeCc-ccCcCHhHHHHhCCccceEecCcchh
Confidence 468889999999 9999999 56777765433333322 11112346799999999999865443
No 49
>3gyx_B Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=96.20 E-value=0.0016 Score=56.03 Aligned_cols=62 Identities=21% Similarity=0.397 Sum_probs=43.0
Q ss_pred cccCcccccCCC-----CccCCCC-ccceeccccCceeeccCCCCHHHHHHHHHhCCCCcEEEecCcch
Q 019589 156 VFVDEFSCIGCK-----NCNNVAP-EVFKIEEDFGRARVYNQCGINEFVQQAIESCPVDCIHRTSAQQL 218 (338)
Q Consensus 156 v~vDe~~CiGCg-----~C~~vap-~vF~iddd~G~a~v~~q~g~~e~v~~Av~~CP~~aI~~~~~~~~ 218 (338)
+++|...|++|+ .|+.+|| +.+.++++.+....+.. ........++..||++||.+....+.
T Consensus 2 v~id~~~C~gC~~c~~~~C~~~CP~~ai~~~~~~~~~~~~d~-~~C~~Cg~Cv~~CP~~Ai~~~~~~~~ 69 (166)
T 3gyx_B 2 TYVDPSKCDGCKGGEKTACMYICPNDLMILDPEEMKAFNQEP-EACWECYSCIKICPQGAITARPYADF 69 (166)
T ss_dssp EEECTTTCCCCCSSSCCHHHHHCTTSCEEEETTTTEEEESCG-GGCCCCCHHHHHCSSCCEEECCCTTT
T ss_pred CEEcchhcCCCCCCCcchhHHhCCccccEEecCCceeEecCc-ccCcccChHhHhCCccceEEeccccc
Confidence 468899999999 9999999 56777766443333322 11112346799999999999866443
No 50
>1bc6_A 7-Fe ferredoxin; electron transport, iron-sulfur; NMR {Bacillus schlegelii} SCOP: d.58.1.2 PDB: 1bd6_A 1bqx_A 1bwe_A
Probab=96.17 E-value=0.0086 Score=44.02 Aligned_cols=64 Identities=19% Similarity=0.216 Sum_probs=39.2
Q ss_pred ccCcccccC--CCCccCCCCc-cceeccccCceeeccCCCCHHHHHHHHHhCCCCcEEEecCcchhhhHHH
Q 019589 157 FVDEFSCIG--CKNCNNVAPE-VFKIEEDFGRARVYNQCGINEFVQQAIESCPVDCIHRTSAQQLSLLEDE 224 (338)
Q Consensus 157 ~vDe~~CiG--Cg~C~~vap~-vF~iddd~G~a~v~~q~g~~e~v~~Av~~CP~~aI~~~~~~~~~~Le~~ 224 (338)
+++...|++ |+.|..+||. .+.+++ +...+... ........+..||++||.+.....-.+++.+
T Consensus 2 ~i~~~~C~~c~C~~C~~~Cp~~ai~~~~--~~~~~~~~--~C~~Cg~C~~~CP~~ai~~~~~~~~~~~~~~ 68 (77)
T 1bc6_A 2 YVITEPCIGTKDASCVEVCPVDCIHEGE--DQYYIDPD--VCIDCGACEAVCPVSAIYHEDFVPEEWKSYI 68 (77)
T ss_dssp EECCSTTTTCCCCSSTTTCTTCCEEECS--SSEEECTT--TCCSCCSHHHHSGGGSSEETTTSCHHHHHHH
T ss_pred EEeCccCCCCCcchhHHhcccccEEeCC--CcEEECcc--cCcCccCCHhhcCccceEecCCCHHHHHHHH
Confidence 467788999 8999999994 465543 22222111 1111224599999999998655444444443
No 51
>1h98_A Ferredoxin; electron transport, thermophilic, iron-sulfur, azotobacter, hydrogen bonds, stability, high resolution; 1.64A {Thermus aquaticus} SCOP: d.58.1.2
Probab=96.10 E-value=0.0063 Score=44.96 Aligned_cols=63 Identities=17% Similarity=0.192 Sum_probs=39.9
Q ss_pred ccCcccccC--CCCccCCCCc-cceeccccCceeeccCCCCHHHHHHHHHhCCCCcEEEecCcchhhhHH
Q 019589 157 FVDEFSCIG--CKNCNNVAPE-VFKIEEDFGRARVYNQCGINEFVQQAIESCPVDCIHRTSAQQLSLLED 223 (338)
Q Consensus 157 ~vDe~~CiG--Cg~C~~vap~-vF~iddd~G~a~v~~q~g~~e~v~~Av~~CP~~aI~~~~~~~~~~Le~ 223 (338)
++|...|++ |+.|..+||. .+.+++ +...+ .. +........+..||++||.+.....-.+++.
T Consensus 2 ~i~~~~C~~c~C~~C~~~CP~~ai~~~~--~~~~~-~~-~~C~~C~~C~~~CP~~Ai~~~~~~~~~~~~~ 67 (78)
T 1h98_A 2 HVICEPCIGVKDQSCVEVCPVECIYDGG--DQFYI-HP-EECIDCGACVPACPVNAIYPEEDVPEQWKSY 67 (78)
T ss_dssp EEECGGGTTTCCCHHHHHCTTCCEEECS--SSEEE-CT-TTCCCCCTHHHHCTTCCEEEGGGCCGGGTHH
T ss_pred EEEchhCCCCCcChhhhhcCccceEcCC--CEEEE-Cc-ccCCcHhHHHHhCCccceEecccChHHHHHH
Confidence 467788999 8999999994 576654 33222 21 1111123459999999999876544444444
No 52
>1kqf_B FDH-N beta S, formate dehydrogenase, nitrate-inducible, iron-SU subunit; oxidoreductase, selenium, selenocysteine, seCys, molybdenum; HET: MGD HEM CDL; 1.60A {Escherichia coli} SCOP: d.58.1.5 f.23.22.1 PDB: 1kqg_B*
Probab=95.80 E-value=0.0021 Score=60.36 Aligned_cols=59 Identities=24% Similarity=0.556 Sum_probs=40.6
Q ss_pred ccccCcccccCCCCccCCCC-ccceeccccCceeeccCCCCH-HHH-----HHHHHhCCCCcEEEecCc
Q 019589 155 HVFVDEFSCIGCKNCNNVAP-EVFKIEEDFGRARVYNQCGIN-EFV-----QQAIESCPVDCIHRTSAQ 216 (338)
Q Consensus 155 ~v~vDe~~CiGCg~C~~vap-~vF~iddd~G~a~v~~q~g~~-e~v-----~~Av~~CP~~aI~~~~~~ 216 (338)
.+.+|...|++|+.|...|| +.+.++++.+... ..... +.+ -.++..||++||.+.+..
T Consensus 125 ~v~id~~~CigCg~C~~~CP~~ai~~~~~~~~~~---kC~~C~~r~~~g~~p~Cv~~CP~~Ai~~~~~~ 190 (294)
T 1kqf_B 125 IVDFQSENCIGCGYCIAGCPFNIPRLNKEDNRVY---KCTLCVDRVSVGQEPACVKTCPTGAIHFGTKK 190 (294)
T ss_dssp CEEECGGGCCCCCHHHHHCTTCCCEEETTTTEEE---CCCTTHHHHTTTCCCHHHHHCTTSCEEEEEHH
T ss_pred ceEeCcccCCCcchhhhcCCCCCcEecCCCCCee---eCCCccchhhcCccHHHHHhCCcCcEEEecHH
Confidence 46688999999999999999 5677765544322 11111 111 178999999999997653
No 53
>3i9v_9 NADH-quinone oxidoreductase subunit 9; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_8* 2fug_9* 3iam_9* 3ias_9* 3m9s_9*
Probab=95.59 E-value=0.002 Score=55.25 Aligned_cols=57 Identities=21% Similarity=0.261 Sum_probs=35.1
Q ss_pred CcccccCCCCccCCCC-ccceeccccCc------------eeeccCCCCHHHHHHHHHhCCCCcEEEecC
Q 019589 159 DEFSCIGCKNCNNVAP-EVFKIEEDFGR------------ARVYNQCGINEFVQQAIESCPVDCIHRTSA 215 (338)
Q Consensus 159 De~~CiGCg~C~~vap-~vF~iddd~G~------------a~v~~q~g~~e~v~~Av~~CP~~aI~~~~~ 215 (338)
|...|++|+.|..+|| ..+.++.+.+. ............+..++..||++||++.+.
T Consensus 49 d~~~Ci~C~~C~~~CP~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~C~~~CP~~Ai~~~~~ 118 (182)
T 3i9v_9 49 GLEKCIGCSLCAAACPAYAIYVEPAENDPENPVSAGERYAKVYEINMLRCIFCGLCEEACPTGAIVLGYD 118 (182)
T ss_dssp SCBSCCCCCHHHHHCTTCCEEEEEECCCSSSCSSSSSCEEEEEEEETTTCCCCCHHHHHCSSSCEEECSC
T ss_pred CCccCcccccchhhCCcccEEeecccccccccccccccccceeecCCCcCcChhChhhhCCccceEecCc
Confidence 5679999999999998 34444322110 011111122223446799999999999754
No 54
>2fdn_A Ferredoxin; electron transport, iron-sulfur, 4Fe-4S; 0.94A {Clostridium acidurici} SCOP: d.58.1.1 PDB: 1fdn_A 1fca_A 1clf_A 1dur_A
Probab=95.44 E-value=0.0039 Score=42.74 Aligned_cols=50 Identities=22% Similarity=0.402 Sum_probs=32.2
Q ss_pred cccccCCCCccCCCCc-cceeccccCceeeccCCCCHHHHHHHHHhCCCCcEEEe
Q 019589 160 EFSCIGCKNCNNVAPE-VFKIEEDFGRARVYNQCGINEFVQQAIESCPVDCIHRT 213 (338)
Q Consensus 160 e~~CiGCg~C~~vap~-vF~iddd~G~a~v~~q~g~~e~v~~Av~~CP~~aI~~~ 213 (338)
...|++|+.|..++|. .+.++++ ... +.. +........+..||++||.+.
T Consensus 5 ~~~C~~C~~C~~~CP~~ai~~~~~--~~~-~~~-~~C~~C~~C~~~CP~~ai~~~ 55 (55)
T 2fdn_A 5 NEACISCGACEPECPVNAISSGDD--RYV-IDA-DTCIDCGACAGVCPVDAPVQA 55 (55)
T ss_dssp CTTCCCCCTTGGGCTTCCEECCSS--SCE-ECT-TTCCCCCHHHHTCTTCCEEEC
T ss_pred cccCcChhhHHHHCCccccCcCCC--EEE-ecc-ccCcChhChHHHccccceecC
Confidence 6789999999999994 4555432 222 211 111123357999999999863
No 55
>7fd1_A FD1, protein (7-Fe ferredoxin I); electron transport, iron-sulfur; 1.30A {Azotobacter vinelandii} SCOP: d.58.1.2 PDB: 1fda_A 1fdb_A 1fer_A 1axq_A 5fd1_A 6fdr_A 6fd1_A 7fdr_A 1frh_A 1fri_A 1fdd_A 1frl_A 1d3w_A 1frm_A 1frx_A 1g6b_A 1pc4_A 1frj_A 2fd2_A 1fd2_A ...
Probab=95.28 E-value=0.013 Score=45.88 Aligned_cols=55 Identities=24% Similarity=0.400 Sum_probs=36.2
Q ss_pred ccCcccccCCC--CccCCCC-ccceeccccCceeeccCCCCHHHHHHHHHhCCCCcEEEecC
Q 019589 157 FVDEFSCIGCK--NCNNVAP-EVFKIEEDFGRARVYNQCGINEFVQQAIESCPVDCIHRTSA 215 (338)
Q Consensus 157 ~vDe~~CiGCg--~C~~vap-~vF~iddd~G~a~v~~q~g~~e~v~~Av~~CP~~aI~~~~~ 215 (338)
++|...|++|+ .|..+|| ..+.++++ ...+... .......++..||++||.+...
T Consensus 2 ~~~~~~C~~C~~~~C~~~CP~~ai~~~~~--~~~i~~~--~C~~Cg~C~~~CP~~ai~~~~~ 59 (106)
T 7fd1_A 2 FVVTDNCIKCKYTDCVEVCPVDCFYEGPN--FLVIHPD--ECIDCALCEPECPAQAIFSEDE 59 (106)
T ss_dssp EEECGGGTTTCCCHHHHHCTTCCEEECSS--CEEECTT--TCCCCCTTGGGCTTCCEEEGGG
T ss_pred eECccccCCccCcHHHHHcCccceEcCCC--cEEECcc--cCCChhhhHHhCCChhhhcccc
Confidence 56788999999 8999998 55666442 2222111 1111224599999999999754
No 56
>2v2k_A Ferredoxin; iron, transport, iron-sulfur, mycobacterium tuberculosis, Fe cluster, metal-binding, electron transfer, transport; 1.6A {Mycobacterium smegmatis}
Probab=95.20 E-value=0.0023 Score=50.08 Aligned_cols=65 Identities=14% Similarity=0.140 Sum_probs=40.1
Q ss_pred ccCcccccCC--CCccCCCC-ccceeccccCceeeccCCCCHHHHHHHHHhCCCCcEEEecCcchhhhHHHH
Q 019589 157 FVDEFSCIGC--KNCNNVAP-EVFKIEEDFGRARVYNQCGINEFVQQAIESCPVDCIHRTSAQQLSLLEDEM 225 (338)
Q Consensus 157 ~vDe~~CiGC--g~C~~vap-~vF~iddd~G~a~v~~q~g~~e~v~~Av~~CP~~aI~~~~~~~~~~Le~~~ 225 (338)
+++...|++| +.|..+|| +.+.++++ .. .+.. .........+..||++||.+.......+++.+.
T Consensus 2 ~i~~~~C~~C~c~~C~~~CP~~ai~~~~~--~~-~~~~-~~C~~Cg~C~~~CP~~Ai~~~~~~~~~~~~~~~ 69 (105)
T 2v2k_A 2 YVIAEPCVDVKDKACIEECPVDCIYEGAR--ML-YIHP-DECVDCGACEPVCPVEAIYYEDDVPDQWSSYAQ 69 (105)
T ss_dssp EEECGGGTTTCCCHHHHHCTTCCEEECSS--CE-EECT-TTCCCCCCSGGGCTTCCEEEGGGCCGGGTTHHH
T ss_pred EEecccCCCCCcChhhhhcCccccCcCCC--cE-EEeC-CcCcchhhHHHhCCccCEEecCCChHHHHHHHH
Confidence 4677889988 99999998 55666542 22 2221 111112234999999999998665455554443
No 57
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=95.19 E-value=0.0029 Score=68.80 Aligned_cols=58 Identities=22% Similarity=0.481 Sum_probs=43.4
Q ss_pred ccccCcccccCCCCccCCCC----ccceeccccCceeeccCCCCHHHHHHHHHhCCC-CcEEEecC
Q 019589 155 HVFVDEFSCIGCKNCNNVAP----EVFKIEEDFGRARVYNQCGINEFVQQAIESCPV-DCIHRTSA 215 (338)
Q Consensus 155 ~v~vDe~~CiGCg~C~~vap----~vF~iddd~G~a~v~~q~g~~e~v~~Av~~CP~-~aI~~~~~ 215 (338)
.+.+|+..|++|+.|+.+|| ..+.++++.+...+ . +.+..+-.++..||+ +||.++..
T Consensus 945 ~~~id~~~C~~Cg~C~~~CP~~~~~ai~~~~~~~~~~~-~--~~C~~Cg~C~~~CP~~~Ai~~~~~ 1007 (1025)
T 1gte_A 945 VAVIDEEMCINCGKCYMTCNDSGYQAIQFDPETHLPTV-T--DTCTGCTLCLSVCPIIDCIRMVSR 1007 (1025)
T ss_dssp EEEECTTTCCCCCHHHHHHHHHSCSCEEECTTTCCEEE-C--TTCCCCCHHHHHCSSTTTEEEEEC
T ss_pred eEEEEcccCcccCHHHHhcCccccCCEEEeCCCceEEe-C--ccCCChhHHHhhCCCCCCEEEecC
Confidence 45789999999999999999 67777765333332 2 333345578999999 99999865
No 58
>1ti6_B Pyrogallol hydroxytransferase small subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} SCOP: b.3.5.1 d.58.1.5 PDB: 1ti2_B* 1ti4_B* 1vld_N* 1vle_N* 1vlf_N*
Probab=94.88 E-value=0.019 Score=53.23 Aligned_cols=62 Identities=15% Similarity=0.194 Sum_probs=41.4
Q ss_pred CccccCcccccCCCCccCCCC-ccceeccccCceeeccCCCCH-HHH------H---HHHHhCCCCcEEEecCcch
Q 019589 154 DHVFVDEFSCIGCKNCNNVAP-EVFKIEEDFGRARVYNQCGIN-EFV------Q---QAIESCPVDCIHRTSAQQL 218 (338)
Q Consensus 154 ~~v~vDe~~CiGCg~C~~vap-~vF~iddd~G~a~v~~q~g~~-e~v------~---~Av~~CP~~aI~~~~~~~~ 218 (338)
..+.+|...|++|+.|...|| +.+.++++.+. ....... +.+ - .+++.||++||.+.+..+.
T Consensus 90 g~v~id~~~CigC~~C~~~CP~~Ai~~~~~~~~---~~kC~~C~~r~~~~~~~G~~P~Cv~~CP~~Ai~~~~~~dp 162 (274)
T 1ti6_B 90 GIVLIDPEKAKGKKELLDTCPYGVMYWNEEENV---AQKCTMCAHLLDDESWAPKMPRCAHNCGSFVYEFLKTTPE 162 (274)
T ss_dssp SCEEECTTTTTTCGGGGGGCSSCCCEEETTTTE---EECCCTTHHHHTCTTCTTCSCHHHHHCSSCCEEEEEECHH
T ss_pred CcEEechhhccchHHHHhhCccCCeEEEcccCc---cccCCCchhhhhhhccCCCCcchhhhCCcCceEEcCCCcH
Confidence 356789999999999999999 44555544332 1221111 111 1 6799999999999876543
No 59
>1hfe_L Protein (Fe-only hydrogenase (E.C.1.18.99.1) (larger subunit)); hydrogene metabolism, periplasm; 1.60A {Desulfovibrio vulgaris subsp} SCOP: c.96.1.1 d.58.1.5 PDB: 1e08_A* 1gx7_A*
Probab=94.55 E-value=0.0036 Score=61.60 Aligned_cols=55 Identities=27% Similarity=0.501 Sum_probs=36.8
Q ss_pred ccccCcccccCCCCccCCCCc-cceeccccCceeec-cCCCCHHHHHHHHHhCCCCcEEE
Q 019589 155 HVFVDEFSCIGCKNCNNVAPE-VFKIEEDFGRARVY-NQCGINEFVQQAIESCPVDCIHR 212 (338)
Q Consensus 155 ~v~vDe~~CiGCg~C~~vap~-vF~iddd~G~a~v~-~q~g~~e~v~~Av~~CP~~aI~~ 212 (338)
.+.+|...|++|+.|..+||. .+.+++ |....+ .. .....+-.++..||++||.+
T Consensus 27 ~i~~d~~kCi~Cg~C~~~CP~~ai~~~~--~~~~~i~~~-~~C~~Cg~C~~~CP~~Ai~~ 83 (421)
T 1hfe_L 27 FVQIDEAKCIGCDTCSQYCPTAAIFGEM--GEPHSIPHI-EACINCGQCLTHCPENAIYE 83 (421)
T ss_dssp SEEECTTTCCCCCHHHHHCTTCCCBCCT--TSCCBCCCG-GGCCCCCTTGGGCTTCCEEE
T ss_pred eEEECcccCCCccHHHHhcCcCceeccc--ccceeecCh-hhCCchhhHHHhhCcCCccc
Confidence 567899999999999999995 444433 333323 21 11112234599999999998
No 60
>2vpz_B NRFC protein; oxidoreductase, molybdopterin guanine dinucleotide, iron-sulfur, metal-binding, molybdopterin; HET: MGD; 2.40A {Thermus thermophilus} PDB: 2vpx_B* 2vpw_B* 2vpy_B*
Probab=94.51 E-value=0.029 Score=49.27 Aligned_cols=57 Identities=23% Similarity=0.450 Sum_probs=35.9
Q ss_pred ccccCcccccCCCCccCCCC-ccceeccccCceeeccCC-CCHHHHH-----HHHHhCCCCcEEEecC
Q 019589 155 HVFVDEFSCIGCKNCNNVAP-EVFKIEEDFGRARVYNQC-GINEFVQ-----QAIESCPVDCIHRTSA 215 (338)
Q Consensus 155 ~v~vDe~~CiGCg~C~~vap-~vF~iddd~G~a~v~~q~-g~~e~v~-----~Av~~CP~~aI~~~~~ 215 (338)
.+.+|...|++|+.|...|| +.+.++++.+ .... +-.+.+. .+++.||++||.+.+.
T Consensus 82 ~~~id~~~CigC~~C~~~CP~~Ai~~~~~~~----~~kC~~C~~~~~~g~~p~Cv~~CP~~Ai~~g~~ 145 (195)
T 2vpz_B 82 LVLVDPKKCIACGACIAACPYDARYLHPAGY----VSKCTFCAHRLEKGKVPACVETCPTYCRTFGDL 145 (195)
T ss_dssp CEEECTTTCCCCCHHHHHCTTCCCEECTTSS----EECCCTTHHHHHTTCCCHHHHSCTTCCEEEEET
T ss_pred ceeecCCCCCCcChhHhhCCCCCeEECCCCC----CccCcCcchHHhCCCCchhHhhCCcccEEEecc
Confidence 45677888888888888888 5566665544 1111 1111111 4788888888887644
No 61
>3c8y_A Iron hydrogenase 1; dithiomethylether, H-cluster, iron-sulfur binding, oxidoreductase; HET: HCN; 1.39A {Clostridium pasteurianum} SCOP: c.96.1.1 d.15.4.2 d.58.1.5 PDB: 1c4c_A* 1c4a_A* 1feh_A*
Probab=94.24 E-value=0.0047 Score=63.14 Aligned_cols=61 Identities=23% Similarity=0.386 Sum_probs=41.8
Q ss_pred ccccCcccccCCCCccCCCCc-----cceeccccCceeecc------CCCCHHHHHHHHHhCCCCcEEEecC
Q 019589 155 HVFVDEFSCIGCKNCNNVAPE-----VFKIEEDFGRARVYN------QCGINEFVQQAIESCPVDCIHRTSA 215 (338)
Q Consensus 155 ~v~vDe~~CiGCg~C~~vap~-----vF~iddd~G~a~v~~------q~g~~e~v~~Av~~CP~~aI~~~~~ 215 (338)
.+.+|...|++|+.|+.+||. .+.+.++.....+.. .......+-.++..||++||.+...
T Consensus 139 ~i~~d~~kCi~Cg~Cv~~CP~~~~~~ai~~~~~g~~~~i~~~~~~~i~~~~Ci~Cg~Cv~~CP~gAi~~~~~ 210 (574)
T 3c8y_A 139 SLTVDRTKCLLCGRCVNACGKNTETYAMKFLNKNGKTIIGAEDEKCFDDTNCLLCGQCIIACPVAALSEKSH 210 (574)
T ss_dssp SEEEEGGGCCCCCHHHHHHHHHHSCCCSEEEEETTEEEEESGGGCCGGGSSCCCCCHHHHHCSSTTEEECCC
T ss_pred cceeCcccCcCCCCccchhCchhcCCceeeccCCccceecccccceechhhCCcchhHHHhhccCCcccccc
Confidence 677899999999999999994 676665433222211 0111223457799999999998753
No 62
>3i9v_3 NADH-quinone oxidoreductase subunit 3; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_3* 2fug_3* 3iam_3* 3ias_3* 3m9s_3*
Probab=93.84 E-value=0.0088 Score=63.28 Aligned_cols=62 Identities=24% Similarity=0.340 Sum_probs=40.7
Q ss_pred CccccCcccccCCCCccCCCCc-----cceeccccCceeeccC--CCCHHHHHHHHHhCCCCcEEEecC
Q 019589 154 DHVFVDEFSCIGCKNCNNVAPE-----VFKIEEDFGRARVYNQ--CGINEFVQQAIESCPVDCIHRTSA 215 (338)
Q Consensus 154 ~~v~vDe~~CiGCg~C~~vap~-----vF~iddd~G~a~v~~q--~g~~e~v~~Av~~CP~~aI~~~~~ 215 (338)
..+.+|...||+|+.|+.+|++ .+.+.++.....+... ...+..+-.+++.||++||+..+.
T Consensus 172 p~i~~d~~~CI~C~~Cv~~C~~~~~~~~i~~~~~g~~~~i~~~~~~~~C~~CG~Cv~vCP~gAl~~~~~ 240 (783)
T 3i9v_3 172 PFVILDRERCIHCKRCVRYFEEVPGDEVLDFIERGVHTFIGTMDFGLPSGFSGNITDICPVGALLDLTA 240 (783)
T ss_dssp TTEEECTTTCCCCCHHHHHHHHTTCCCCCEECSCTTSCCEECSSTTCCSTTTTTHHHHCSSSSEEEGGG
T ss_pred ccEEEchhhCCCccHHHHHhhhhcCCceeeeecCCCccEEccCCCCCCCccchhHHhhcccCceecccc
Confidence 3567799999999999999954 3445444223332221 112344556799999999987643
No 63
>1h0h_B Formate dehydrogenase (small subunit); tungsten selenium formate dehydrogenase, selenocysteine, molybdopterin, MGD, iron-sulphur cluster; HET: 2MD MGD EPE; 1.8A {Desulfovibrio gigas} SCOP: d.58.1.5
Probab=92.71 E-value=0.026 Score=50.30 Aligned_cols=59 Identities=12% Similarity=0.262 Sum_probs=35.7
Q ss_pred ccccCccccc--CCCCccCCCC-ccceeccccCceeeccCCCCH-HHHH-----HHHHhCCCCcEEEecCc
Q 019589 155 HVFVDEFSCI--GCKNCNNVAP-EVFKIEEDFGRARVYNQCGIN-EFVQ-----QAIESCPVDCIHRTSAQ 216 (338)
Q Consensus 155 ~v~vDe~~Ci--GCg~C~~vap-~vF~iddd~G~a~v~~q~g~~-e~v~-----~Av~~CP~~aI~~~~~~ 216 (338)
.+.+|...|+ +|+.|...|| +.+.++++.+. ....... +.+. ..+..||++||.+.+..
T Consensus 100 ~v~id~~~C~~~~C~~C~~~CP~~Ai~~~~~~~~---~~kC~~C~~~~~~G~~p~Cv~~CP~~Ai~~~~~~ 167 (214)
T 1h0h_B 100 CVLFTPKTKDLEDYESVISACPYDVPRKVAESNQ---MAKCDMCIDRITNGLRPACVTSCPTGAMNFGDLS 167 (214)
T ss_dssp CEEECGGGGGCSCHHHHHHHCTTCCCEECTTSSC---EECCCTTHHHHTTTCCCHHHHHCSSSCEEEEEHH
T ss_pred eEEEeHHHCccccccHHHHhcCCCCeEecCCCcc---cCcCCCCcchhhcCCChhHHHhcCcccEEEccHH
Confidence 4567888888 8888888888 44555544331 1111111 1111 56888888888886553
No 64
>2ivf_B Ethylbenzene dehydrogenase beta-subunit; anaerobic hydrocarbon degradation, MOCO, Fe/S cluster, MO- B enzyme, DMSO reductase family; HET: MES MGD MD1 HEM; 1.88A {Aromatoleum aromaticum}
Probab=92.25 E-value=0.047 Score=52.47 Aligned_cols=59 Identities=17% Similarity=0.321 Sum_probs=35.3
Q ss_pred ccccCcccccCCCCccCCCC-ccceeccccCceeeccCCCCH-HHHH-----HHHHhCCCCcEEEecCc
Q 019589 155 HVFVDEFSCIGCKNCNNVAP-EVFKIEEDFGRARVYNQCGIN-EFVQ-----QAIESCPVDCIHRTSAQ 216 (338)
Q Consensus 155 ~v~vDe~~CiGCg~C~~vap-~vF~iddd~G~a~v~~q~g~~-e~v~-----~Av~~CP~~aI~~~~~~ 216 (338)
.+.+|...|++|+.|+.+|| +.+.+++..+... ..... +.+. .++..||++||.+.+..
T Consensus 176 ~v~id~~kCigCg~Cv~aCP~~Ai~~~~~~~~~~---kC~~C~~r~~~g~~paCv~~CP~~Ai~~g~~~ 241 (352)
T 2ivf_B 176 IVLVDQERCKGHRHCVEACPYKAIYFNPVSQTSE---KCILCYPRIEKGIANACNRQCPGRVRAFGYLD 241 (352)
T ss_dssp CEEECTTTCCCCCHHHHHCTTCCEEEETTTTEEE---ECCTTHHHHTTTBCCHHHHTCTTCCEEEEETT
T ss_pred eEEechhhcCCchHHHhhcCccceeccccccccc---ccCCCcchhhcCCCChHHHhcCccceeccccc
Confidence 45677788888888888888 4444544322111 11111 1222 57888999998886543
No 65
>3j16_B RLI1P; ribosome recycling, translation, eukarya, ribosome; HET: ATP; 7.20A {Saccharomyces cerevisiae}
Probab=91.79 E-value=0.054 Score=55.73 Aligned_cols=31 Identities=35% Similarity=0.897 Sum_probs=26.1
Q ss_pred CCccccCcccccCCCCccCCCCccceeccccCceeeccCCCCHHHHHHHHHhCCCCcEEEecC
Q 019589 153 KDHVFVDEFSCIGCKNCNNVAPEVFKIEEDFGRARVYNQCGINEFVQQAIESCPVDCIHRTSA 215 (338)
Q Consensus 153 ~~~v~vDe~~CiGCg~C~~vap~vF~iddd~G~a~v~~q~g~~e~v~~Av~~CP~~aI~~~~~ 215 (338)
....++.|..|||||.| |.-||-+||.++.-
T Consensus 45 ~~~~~i~~~~c~~~~~~--------------------------------~~~cp~~~i~i~nl 75 (608)
T 3j16_B 45 SKIAFISEILCIGCGIC--------------------------------VKKCPFDAIQIINL 75 (608)
T ss_dssp TTEEEECTTTCCCCCHH--------------------------------HHHCSSCCEEEEEE
T ss_pred CCceEEehhhccccccc--------------------------------cccCCccceEEecC
Confidence 34678999999999999 88899999888644
No 66
>1q16_B Respiratory nitrate reductase 1 beta chain; membrane protein, electron-transfer, oxidoreductase; HET: FME MD1 HEM AGA 3PH; 1.90A {Escherichia coli} SCOP: d.58.1.5 PDB: 1r27_B* 1siw_B* 1y5i_B* 1y5l_B* 1y5n_B* 3ir5_B* 3ir6_B* 3ir7_B* 1y4z_B* 3egw_B*
Probab=90.33 E-value=0.096 Score=52.74 Aligned_cols=57 Identities=18% Similarity=0.250 Sum_probs=35.5
Q ss_pred ccccCcccccCCCCccCCCC-ccceeccccCceeeccCCCCHHHHH-----HHHHhCCCCcEEEe
Q 019589 155 HVFVDEFSCIGCKNCNNVAP-EVFKIEEDFGRARVYNQCGINEFVQ-----QAIESCPVDCIHRT 213 (338)
Q Consensus 155 ~v~vDe~~CiGCg~C~~vap-~vF~iddd~G~a~v~~q~g~~e~v~-----~Av~~CP~~aI~~~ 213 (338)
.+.+|...|++|+.|..+|| +...++.+.+....-...+ +.+. .++..||+.||.+.
T Consensus 209 ~v~id~~kCigCg~Cv~~CP~~AI~~~~~~~~~~kC~~Cg--~ri~~G~~P~Cv~~CP~~Ai~~g 271 (512)
T 1q16_B 209 IVLIDQDKCRGWRMCITGCPYKKIYFNWKSGKSEKCIFCY--PRIEAGQPTVCSETCVGRIRYLG 271 (512)
T ss_dssp CEEECTTTCCCCCCHHHHCTTCCEEEETTTTEEEECCTTH--HHHTTTCCCHHHHTCTTCCEEEE
T ss_pred eEEECHHHCCCchHHHhhCCccceecccCCCCcccCcCCC--chhhcCCCCceEeeCchhhhhcc
Confidence 45678889999999999998 4455554433211111111 1111 67999999999865
No 67
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=89.40 E-value=0.077 Score=58.86 Aligned_cols=61 Identities=20% Similarity=0.298 Sum_probs=39.0
Q ss_pred ccCcccccCCCCccCCCCcc-cee---ccc--------c-----------Cce-eeccCCCCHHHHHHHHHhCCC--CcE
Q 019589 157 FVDEFSCIGCKNCNNVAPEV-FKI---EED--------F-----------GRA-RVYNQCGINEFVQQAIESCPV--DCI 210 (338)
Q Consensus 157 ~vDe~~CiGCg~C~~vap~v-F~i---ddd--------~-----------G~a-~v~~q~g~~e~v~~Av~~CP~--~aI 210 (338)
.+|...|++|+.|+.+||.. ..+ +++ + |.. .......++..+-.|+..||+ .||
T Consensus 682 ~~d~~kCi~Cg~Cv~vCP~~AI~~~~~~~~e~~~ap~g~~~~~~~~k~~~g~~~~~~v~~~~C~gCG~Cv~vCP~~~~AI 761 (1231)
T 2c42_A 682 QWVPENCIQCNQCAFVCPHSAILPVLAKEEELVGAPANFTALEAKGKELKGYKFRIQINTLDCMGCGNCADICPPKEKAL 761 (1231)
T ss_dssp EECTTTCCCCCHHHHHCSSCCEEEEEECGGGGTTCCTTCCCEECCSGGGTTCEEEEEECTTTCCCCCHHHHHCSSSSCSE
T ss_pred EEeCccCCchhhHHHhCCcccccccccchHHHhhCcccccccccccccccccccceeechhhCCChhHHHhhCCCCccCe
Confidence 46889999999999999954 222 221 0 110 111122334445578999999 999
Q ss_pred EEecCcc
Q 019589 211 HRTSAQQ 217 (338)
Q Consensus 211 ~~~~~~~ 217 (338)
.+.....
T Consensus 762 ~~~~~~~ 768 (1231)
T 2c42_A 762 VMQPLDT 768 (1231)
T ss_dssp EEEEGGG
T ss_pred EEecchh
Confidence 9987654
No 68
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=87.29 E-value=0.27 Score=49.87 Aligned_cols=56 Identities=16% Similarity=0.101 Sum_probs=38.5
Q ss_pred cCcccc------cCCCCccCCCC-cccee-ccccC---ceeeccCCCCHHHHHHHHHhCCCCcEEEecC
Q 019589 158 VDEFSC------IGCKNCNNVAP-EVFKI-EEDFG---RARVYNQCGINEFVQQAIESCPVDCIHRTSA 215 (338)
Q Consensus 158 vDe~~C------iGCg~C~~vap-~vF~i-ddd~G---~a~v~~q~g~~e~v~~Av~~CP~~aI~~~~~ 215 (338)
.|...| +.|+.|..+|| .++++ +++.| ...+-.+ .+-.+..+...||+.+|.|+.+
T Consensus 507 ~d~~~~~~~~~~~~~~~c~~~CPa~~~~~~~~~~~~~~~~~i~~~--~Ci~C~~C~~~cp~~~i~~~~p 573 (584)
T 2gmh_A 507 KDDSVPVNRNLSIYDGPEQRFCPAGVYEFVPLEQGDGFRLQINAQ--NCVHCKTCDIKDPSQNINWVVP 573 (584)
T ss_dssp SSTTHHHHTHHHHHCCTHHHHCTTCCEEEEECSSTTCEEEEECGG--GCCCCCHHHHHCTTCCEEECCC
T ss_pred cCcccchhhchhhhcchhhhcCChhhEEEeecCCCCceEEEEeCC--CCcCCCCchhhCCCCCceeECC
Confidence 467788 89999999999 77877 64335 3222222 1112335599999999999865
No 69
>1q16_B Respiratory nitrate reductase 1 beta chain; membrane protein, electron-transfer, oxidoreductase; HET: FME MD1 HEM AGA 3PH; 1.90A {Escherichia coli} SCOP: d.58.1.5 PDB: 1r27_B* 1siw_B* 1y5i_B* 1y5l_B* 1y5n_B* 3ir5_B* 3ir6_B* 3ir7_B* 1y4z_B* 3egw_B*
Probab=86.45 E-value=0.41 Score=48.12 Aligned_cols=60 Identities=17% Similarity=0.192 Sum_probs=39.3
Q ss_pred CccccCcccccCCC--CccCCCCc-cceeccccCceeeccCCCCHHHHHHHHHhCCCCcEEEecC
Q 019589 154 DHVFVDEFSCIGCK--NCNNVAPE-VFKIEEDFGRARVYNQCGINEFVQQAIESCPVDCIHRTSA 215 (338)
Q Consensus 154 ~~v~vDe~~CiGCg--~C~~vap~-vF~iddd~G~a~v~~q~g~~e~v~~Av~~CP~~aI~~~~~ 215 (338)
..++++...|++|+ .|..+||. .+.++++.|...+-.. ....+..++..||.+||.+...
T Consensus 175 ~~i~~~~~~C~~C~~~~Cv~aCP~gAI~~~~~~g~v~id~~--kCigCg~Cv~~CP~~AI~~~~~ 237 (512)
T 1q16_B 175 TFMMYLPRLCEHCLNPACVATCPSGAIYKREEDGIVLIDQD--KCRGWRMCITGCPYKKIYFNWK 237 (512)
T ss_dssp CCCEEEEECCCCCSSCHHHHTCTTCCEEEETTTCCEEECTT--TCCCCCCHHHHCTTCCEEEETT
T ss_pred ceEEecCccCcCCCCchhhhhCCcCcEEeecCCCeEEECHH--HCCCchHHHhhCCccceecccC
Confidence 34667889999999 49999994 3445433354433222 1112334599999999998754
No 70
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=85.81 E-value=0.46 Score=48.75 Aligned_cols=46 Identities=7% Similarity=0.071 Sum_probs=36.5
Q ss_pred cCCcccccCCCCCCCH--HHHHHHHHHHHHhcCCCCCCCChhHHHHHHHHHHHHHH
Q 019589 69 ADDYYAVLGLLPDATP--EQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAV 122 (338)
Q Consensus 69 ~~d~Y~vLgv~~~as~--~eIk~aYr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~v 122 (338)
..|||.+||++.+... .+|+++||+|++..+++ .+++..|..|+.|
T Consensus 628 ~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~--------~~r~~lvd~a~~v 675 (681)
T 2pzi_A 628 KASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ--------RHRYTLVDMANKV 675 (681)
T ss_dssp CCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH--------HHHHHHHHHHHHH
T ss_pred CCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh--------HHHHHHHHHhccc
Confidence 4459999999776655 67999999999976654 4678888888876
No 71
>2ivf_B Ethylbenzene dehydrogenase beta-subunit; anaerobic hydrocarbon degradation, MOCO, Fe/S cluster, MO- B enzyme, DMSO reductase family; HET: MES MGD MD1 HEM; 1.88A {Aromatoleum aromaticum}
Probab=85.04 E-value=0.35 Score=46.42 Aligned_cols=60 Identities=22% Similarity=0.308 Sum_probs=40.2
Q ss_pred CccccCcccccCCC--CccCCCCcc-ceeccccCceeeccCCCCHHHHHHHHHhCCCCcEEEecC
Q 019589 154 DHVFVDEFSCIGCK--NCNNVAPEV-FKIEEDFGRARVYNQCGINEFVQQAIESCPVDCIHRTSA 215 (338)
Q Consensus 154 ~~v~vDe~~CiGCg--~C~~vap~v-F~iddd~G~a~v~~q~g~~e~v~~Av~~CP~~aI~~~~~ 215 (338)
..++++...|++|+ .|..+||.. +..+++.|...+-.. .......++..||.+||.+...
T Consensus 142 ~~~~~~~~~C~~C~~~~Cv~~CP~gAi~~~~~~g~v~id~~--kCigCg~Cv~aCP~~Ai~~~~~ 204 (352)
T 2ivf_B 142 PFFFYLARMCNHCTNPACLAACPTGAIYKREDNGIVLVDQE--RCKGHRHCVEACPYKAIYFNPV 204 (352)
T ss_dssp EECEEEEECCCCCSSCHHHHHCTTCCEEECTTTCCEEECTT--TCCCCCHHHHHCTTCCEEEETT
T ss_pred eEEEECCCCCcCcCCccccccCCCCceeecCCCCeEEechh--hcCCchHHHhhcCccceecccc
Confidence 35667889999999 799999943 444443454333221 1222446799999999998754
No 72
>3or1_B Sulfite reductase beta; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_B* 2v4j_B* 2xsj_B*
Probab=84.06 E-value=0.17 Score=49.02 Aligned_cols=14 Identities=14% Similarity=0.100 Sum_probs=7.8
Q ss_pred CHHHHHHHHHHHHH
Q 019589 83 TPEQIKKAYYNCMK 96 (338)
Q Consensus 83 s~~eIk~aYr~l~~ 96 (338)
+.+++...+..|..
T Consensus 107 ~~e~l~~l~~~L~~ 120 (386)
T 3or1_B 107 NEETLKALVADLKT 120 (386)
T ss_dssp SHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHh
Confidence 34556666665554
No 73
>3mm5_B Sulfite reductase, dissimilatory-type subunit BET; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3c7b_B* 3mm6_B* 3mm7_B* 3mm8_B* 3mm9_B* 3mma_B* 3mmb_B* 3mmc_B*
Probab=83.76 E-value=0.19 Score=48.38 Aligned_cols=56 Identities=11% Similarity=0.132 Sum_probs=27.1
Q ss_pred ccccCcccc-cCC--CCccCCCCc-cceeccccCceeeccCCCCHHHHHHHHHhCCCCcEEE
Q 019589 155 HVFVDEFSC-IGC--KNCNNVAPE-VFKIEEDFGRARVYNQCGINEFVQQAIESCPVDCIHR 212 (338)
Q Consensus 155 ~v~vDe~~C-iGC--g~C~~vap~-vF~iddd~G~a~v~~q~g~~e~v~~Av~~CP~~aI~~ 212 (338)
...+|...| .+| +.|+..||. ...++++.+...+-.. ....+-.++..||.+||..
T Consensus 199 ~p~id~~~c~~~Ce~~~Cv~~CP~~AI~~~~~~~~~~id~~--~C~~Cg~C~~~CP~~Ai~~ 258 (366)
T 3mm5_B 199 PPIPNDEAIRKTCEIPSTVAACPTGALKPDMKNKTIKVDVE--KCMYCGNCYTMCPGMPLFD 258 (366)
T ss_dssp CCCCCHHHHHHHCCHHHHHHTCTTCCEEEETTTTEEEECGG--GCCCCCHHHHHCTTCCCCC
T ss_pred ceEEcchhccccccccchhccCCccceEecCCCCeEEEehh--hCCCcchHHHhCCHhhccc
Confidence 344555555 455 667777763 3444433232222221 0111223478888887743
No 74
>2vpz_B NRFC protein; oxidoreductase, molybdopterin guanine dinucleotide, iron-sulfur, metal-binding, molybdopterin; HET: MGD; 2.40A {Thermus thermophilus} PDB: 2vpx_B* 2vpw_B* 2vpy_B*
Probab=81.43 E-value=1.4 Score=38.25 Aligned_cols=60 Identities=22% Similarity=0.226 Sum_probs=39.1
Q ss_pred CccccCcccccCCC--CccCCCCc-cceeccccCceeeccCCCCHHHHHHHHHhCCCCcEEEecCc
Q 019589 154 DHVFVDEFSCIGCK--NCNNVAPE-VFKIEEDFGRARVYNQCGINEFVQQAIESCPVDCIHRTSAQ 216 (338)
Q Consensus 154 ~~v~vDe~~CiGCg--~C~~vap~-vF~iddd~G~a~v~~q~g~~e~v~~Av~~CP~~aI~~~~~~ 216 (338)
..+.++...|++|+ .|..+||. .+.+++ .|...+-.. ........+..||.+||.+....
T Consensus 49 ~~~~~~~~~C~~C~~p~C~~~CP~gAi~~~~-~g~~~id~~--~CigC~~C~~~CP~~Ai~~~~~~ 111 (195)
T 2vpz_B 49 LVVEFRPEQCLHCENPPCVPVCPTGASYQTK-DGLVLVDPK--KCIACGACIAACPYDARYLHPAG 111 (195)
T ss_dssp CEEEEEEEECCCCSSCTTTTTCSSSCEEECT-TSCEEECTT--TCCCCCHHHHHCTTCCCEECTTS
T ss_pred eeEEECcccCcCccCcHHHHhcCCCceeccc-ccceeecCC--CCCCcChhHhhCCCCCeEECCCC
Confidence 34567889999999 69999994 444443 343332221 11123456999999999987653
No 75
>3bk7_A ABC transporter ATP-binding protein; ABC ATPase, iron-sulfur cluster, adenosine diphosphate, nucleotide-binding; HET: ADP; 2.80A {Pyrococcus abyssi} PDB: 3j15_B*
Probab=78.79 E-value=0.61 Score=47.78 Aligned_cols=21 Identities=33% Similarity=0.738 Sum_probs=16.1
Q ss_pred CccccCcccccCCCCccCCCC
Q 019589 154 DHVFVDEFSCIGCKNCNNVAP 174 (338)
Q Consensus 154 ~~v~vDe~~CiGCg~C~~vap 174 (338)
...++.|..|+|||.|+.-||
T Consensus 60 ~~~~i~e~~c~gc~~~~~~~p 80 (607)
T 3bk7_A 60 YKPIIQEASCTGCGICVHKCP 80 (607)
T ss_dssp TEEEECTTTCCCCCHHHHHCS
T ss_pred CcceeeecccCccccccCCCC
Confidence 466788999999999944433
No 76
>1h0h_B Formate dehydrogenase (small subunit); tungsten selenium formate dehydrogenase, selenocysteine, molybdopterin, MGD, iron-sulphur cluster; HET: 2MD MGD EPE; 1.8A {Desulfovibrio gigas} SCOP: d.58.1.5
Probab=66.54 E-value=1.3 Score=39.07 Aligned_cols=57 Identities=18% Similarity=0.312 Sum_probs=37.2
Q ss_pred ccCcccccCCCC--ccCCCC---cc-ceeccccCceeeccCCCCHH--HHHHHHHhCCCCcEEEecC
Q 019589 157 FVDEFSCIGCKN--CNNVAP---EV-FKIEEDFGRARVYNQCGINE--FVQQAIESCPVDCIHRTSA 215 (338)
Q Consensus 157 ~vDe~~CiGCg~--C~~vap---~v-F~iddd~G~a~v~~q~g~~e--~v~~Av~~CP~~aI~~~~~ 215 (338)
.++...|.+|+. |..+|| .. +..++..|...+.. .... .....+..||.+||.+.+.
T Consensus 66 ~~~~~~C~~C~~p~C~~~CP~~~~gAi~~~~~~g~v~id~--~~C~~~~C~~C~~~CP~~Ai~~~~~ 130 (214)
T 1h0h_B 66 LFFPDQCRHCIAPPCKATADMEDESAIIHDDATGCVLFTP--KTKDLEDYESVISACPYDVPRKVAE 130 (214)
T ss_dssp EEEEECCCCCSSCHHHHHHTTTCTTSEEECTTTCCEEECG--GGGGCSCHHHHHHHCTTCCCEECTT
T ss_pred eecCCcCcCcCCchhhccCCccccccEEecCCCCeEEEeH--HHCccccccHHHHhcCCCCeEecCC
Confidence 346788999997 999998 33 33333235433221 1222 4677899999999998654
No 77
>3mm5_A Sulfite reductase, dissimilatory-type subunit ALP; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3mm6_A* 3mm7_A* 3mm8_A* 3mm9_A* 3mma_A* 3mmb_A* 3mmc_A* 3c7b_A*
Probab=66.31 E-value=1.5 Score=43.04 Aligned_cols=22 Identities=27% Similarity=0.751 Sum_probs=14.0
Q ss_pred ccccCcccccCCCCccCCCCcc
Q 019589 155 HVFVDEFSCIGCKNCNNVAPEV 176 (338)
Q Consensus 155 ~v~vDe~~CiGCg~C~~vap~v 176 (338)
.+.+|...|++|+.|...||..
T Consensus 278 ~~~id~~~Ci~Cg~Ci~~CP~~ 299 (418)
T 3mm5_A 278 ELTIDNRECVRCMHCINKMPKA 299 (418)
T ss_dssp CEEECTTTCCCCCHHHHHCTTT
T ss_pred eeEEChhhcCccChhHHhCcHh
Confidence 4456667777777776666654
No 78
>7fd1_A FD1, protein (7-Fe ferredoxin I); electron transport, iron-sulfur; 1.30A {Azotobacter vinelandii} SCOP: d.58.1.2 PDB: 1fda_A 1fdb_A 1fer_A 1axq_A 5fd1_A 6fdr_A 6fd1_A 7fdr_A 1frh_A 1fri_A 1fdd_A 1frl_A 1d3w_A 1frm_A 1frx_A 1g6b_A 1pc4_A 1frj_A 2fd2_A 1fd2_A ...
Probab=60.65 E-value=3.7 Score=31.46 Aligned_cols=28 Identities=21% Similarity=0.579 Sum_probs=21.3
Q ss_pred ccccCcccccCCCCccCCCC-ccceeccc
Q 019589 155 HVFVDEFSCIGCKNCNNVAP-EVFKIEED 182 (338)
Q Consensus 155 ~v~vDe~~CiGCg~C~~vap-~vF~iddd 182 (338)
.+.++...|++||.|..+|| +.+.+.++
T Consensus 31 ~~~i~~~~C~~Cg~C~~~CP~~ai~~~~~ 59 (106)
T 7fd1_A 31 FLVIHPDECIDCALCEPECPAQAIFSEDE 59 (106)
T ss_dssp CEEECTTTCCCCCTTGGGCTTCCEEEGGG
T ss_pred cEEECcccCCChhhhHHhCCChhhhcccc
Confidence 35678889999999999998 44555443
No 79
>1kqf_B FDH-N beta S, formate dehydrogenase, nitrate-inducible, iron-SU subunit; oxidoreductase, selenium, selenocysteine, seCys, molybdenum; HET: MGD HEM CDL; 1.60A {Escherichia coli} SCOP: d.58.1.5 f.23.22.1 PDB: 1kqg_B*
Probab=60.50 E-value=2.5 Score=39.15 Aligned_cols=57 Identities=14% Similarity=0.267 Sum_probs=36.2
Q ss_pred cccCcccccCCC--CccCCCCc--cceeccccCceeeccCCCCHHHHHHHHHhCCCCcEEEecC
Q 019589 156 VFVDEFSCIGCK--NCNNVAPE--VFKIEEDFGRARVYNQCGINEFVQQAIESCPVDCIHRTSA 215 (338)
Q Consensus 156 v~vDe~~CiGCg--~C~~vap~--vF~iddd~G~a~v~~q~g~~e~v~~Av~~CP~~aI~~~~~ 215 (338)
..++...|++|+ .|..+||. .+..++ .|...+-.. .......++..||.++|.+...
T Consensus 93 ~~~~~~~C~~C~~~~C~~~CP~~gAi~~~~-~g~v~id~~--~CigCg~C~~~CP~~ai~~~~~ 153 (294)
T 1kqf_B 93 WLIRKDGCMHCEDPGCLKACPSAGAIIQYA-NGIVDFQSE--NCIGCGYCIAGCPFNIPRLNKE 153 (294)
T ss_dssp EEEEEESCCCBSSCHHHHHCCSTTSEEEET-TSCEEECGG--GCCCCCHHHHHCTTCCCEEETT
T ss_pred EEECcccCCCcCChhhhhhCCccCcccccc-ccceEeCcc--cCCCcchhhhcCCCCCcEecCC
Confidence 345678899999 79999985 344433 344333221 1112335689999999998754
No 80
>1ti6_B Pyrogallol hydroxytransferase small subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} SCOP: b.3.5.1 d.58.1.5 PDB: 1ti2_B* 1ti4_B* 1vld_N* 1vle_N* 1vlf_N*
Probab=59.12 E-value=4.1 Score=37.36 Aligned_cols=58 Identities=12% Similarity=0.265 Sum_probs=37.3
Q ss_pred ccccCcccccCCCC--ccCCCCccceeccccCceeeccCCCCHHHHHHHHHhCCCCcEEEecC
Q 019589 155 HVFVDEFSCIGCKN--CNNVAPEVFKIEEDFGRARVYNQCGINEFVQQAIESCPVDCIHRTSA 215 (338)
Q Consensus 155 ~v~vDe~~CiGCg~--C~~vap~vF~iddd~G~a~v~~q~g~~e~v~~Av~~CP~~aI~~~~~ 215 (338)
........|.+|+. |..+||..+..+ +.|...+-. +.......++..||.+||.+...
T Consensus 60 ~~~~~~~~C~~C~~p~C~~~CP~Ai~~~-~~g~v~id~--~~CigC~~C~~~CP~~Ai~~~~~ 119 (274)
T 1ti6_B 60 DINYRPTPCMHCENAPCVAKGNGAVYQR-EDGIVLIDP--EKAKGKKELLDTCPYGVMYWNEE 119 (274)
T ss_dssp EEEEEEECCCCCTTCHHHHHTTTSEEEC-TTSCEEECT--TTTTTCGGGGGGCSSCCCEEETT
T ss_pred eeeEcCCcCCCCCChHHHhhChHHhhhc-cCCcEEech--hhccchHHHHhhCccCCeEEEcc
Confidence 34556788999999 999999822222 235433222 12223445699999999998753
No 81
>2pa8_D DNA-directed RNA polymerase subunit D; ferredoxin-like Fe-S binding motif, platform for RNA polymer assembly, transferase; 1.76A {Sulfolobus solfataricus} PDB: 2pmz_D 3hkz_D 2waq_D 2wb1_D 2y0s_D
Probab=50.33 E-value=3.6 Score=37.48 Aligned_cols=51 Identities=20% Similarity=0.418 Sum_probs=31.3
Q ss_pred cCCCCccCCCC-ccceeccccCceeeccCCCCHHHHHHHHHhCCCCcEEEecCcch
Q 019589 164 IGCKNCNNVAP-EVFKIEEDFGRARVYNQCGINEFVQQAIESCPVDCIHRTSAQQL 218 (338)
Q Consensus 164 iGCg~C~~vap-~vF~iddd~G~a~v~~q~g~~e~v~~Av~~CP~~aI~~~~~~~~ 218 (338)
.+|+.|...|| ..+.+++. ...+.+. .....+..++..|| +||.+....+.
T Consensus 174 ~~C~~C~~~CP~g~I~id~~--~~v~~d~-~~C~~C~~C~~vCp-~aI~~~~~~d~ 225 (265)
T 2pa8_D 174 ANCEKAVNVCPEGVFELKDG--KLSVKNE-LSCTLCEECLRYCN-GSIRISFVEDK 225 (265)
T ss_dssp SCCTTHHHHCTTCCEEEETT--EEEESCG-GGCCCCCHHHHHHT-TSEEEEEEEEE
T ss_pred hhHHHHHHhCcccCeEecCC--eeEEecc-ccCCCchHHHHhCC-CceEEEecCCe
Confidence 78999998888 66777663 2333321 11112334578899 89988654433
No 82
>2v2k_A Ferredoxin; iron, transport, iron-sulfur, mycobacterium tuberculosis, Fe cluster, metal-binding, electron transfer, transport; 1.6A {Mycobacterium smegmatis}
Probab=46.25 E-value=6.3 Score=29.92 Aligned_cols=25 Identities=24% Similarity=0.685 Sum_probs=19.9
Q ss_pred cccCcccccCCCCccCCCCcc-ceec
Q 019589 156 VFVDEFSCIGCKNCNNVAPEV-FKIE 180 (338)
Q Consensus 156 v~vDe~~CiGCg~C~~vap~v-F~id 180 (338)
+.++...|++|+.|..+||.. +.+.
T Consensus 32 ~~~~~~~C~~Cg~C~~~CP~~Ai~~~ 57 (105)
T 2v2k_A 32 LYIHPDECVDCGACEPVCPVEAIYYE 57 (105)
T ss_dssp EEECTTTCCCCCCSGGGCTTCCEEEG
T ss_pred EEEeCCcCcchhhHHHhCCccCEEec
Confidence 567889999999999999953 4443
No 83
>3or1_A Sulfite reductase alpha; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_A* 2v4j_A* 2xsj_A*
Probab=46.18 E-value=4.8 Score=39.56 Aligned_cols=33 Identities=27% Similarity=0.621 Sum_probs=23.2
Q ss_pred ccccCcccccCCCCccCCCCccceeccccCcee
Q 019589 155 HVFVDEFSCIGCKNCNNVAPEVFKIEEDFGRAR 187 (338)
Q Consensus 155 ~v~vDe~~CiGCg~C~~vap~vF~iddd~G~a~ 187 (338)
.+.+|...|+.|+.|+.+||.--...++.|...
T Consensus 295 ~l~Id~~~C~~Cg~Ci~~CP~al~~~~~~G~~i 327 (437)
T 3or1_A 295 TLSIDNKNCTRCMHCINTMPRALKIGDERGASI 327 (437)
T ss_dssp EEEECGGGCCCCSHHHHHCTTTEECCSSEEEEE
T ss_pred EEEEccccCCchhhhHhhCcHhhccCCCCceEE
Confidence 456799999999999888886444433434433
No 84
>3mm5_B Sulfite reductase, dissimilatory-type subunit BET; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3c7b_B* 3mm6_B* 3mm7_B* 3mm8_B* 3mm9_B* 3mma_B* 3mmb_B* 3mmc_B*
Probab=41.87 E-value=6.1 Score=37.67 Aligned_cols=27 Identities=7% Similarity=0.354 Sum_probs=18.6
Q ss_pred HHHHHhCCCCcEEEec-CcchhhhHHHH
Q 019589 199 QQAIESCPVDCIHRTS-AQQLSLLEDEM 225 (338)
Q Consensus 199 ~~Av~~CP~~aI~~~~-~~~~~~Le~~~ 225 (338)
-.++..||++||.+.+ ...+.+-+..|
T Consensus 214 ~~Cv~~CP~~AI~~~~~~~~~~id~~~C 241 (366)
T 3mm5_B 214 PSTVAACPTGALKPDMKNKTIKVDVEKC 241 (366)
T ss_dssp HHHHHTCTTCCEEEETTTTEEEECGGGC
T ss_pred cchhccCCccceEecCCCCeEEEehhhC
Confidence 6889999999999973 33344433333
No 85
>3i9v_9 NADH-quinone oxidoreductase subunit 9; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_8* 2fug_9* 3iam_9* 3ias_9* 3m9s_9*
Probab=40.61 E-value=5.5 Score=33.20 Aligned_cols=27 Identities=22% Similarity=0.485 Sum_probs=20.1
Q ss_pred cccCcccccCCCCccCCCCcc-ceeccc
Q 019589 156 VFVDEFSCIGCKNCNNVAPEV-FKIEED 182 (338)
Q Consensus 156 v~vDe~~CiGCg~C~~vap~v-F~iddd 182 (338)
..++...|++|+.|..+||.. ..+.++
T Consensus 91 ~~~~~~~C~~C~~C~~~CP~~Ai~~~~~ 118 (182)
T 3i9v_9 91 YEINMLRCIFCGLCEEACPTGAIVLGYD 118 (182)
T ss_dssp EEEETTTCCCCCHHHHHCSSSCEEECSC
T ss_pred eecCCCcCcChhChhhhCCccceEecCc
Confidence 346778999999999999844 444443
No 86
>1kf6_B Fumarate reductase iron-sulfur protein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.1.2.1 d.15.4.2 PDB: 1kfy_B* 1l0v_B* 2b76_B* 3cir_B* 3p4p_B* 3p4q_B* 3p4r_B* 3p4s_B*
Probab=36.75 E-value=4.4 Score=35.96 Aligned_cols=14 Identities=29% Similarity=0.733 Sum_probs=11.8
Q ss_pred cccCcccccCCCCc
Q 019589 156 VFVDEFSCIGCKNC 169 (338)
Q Consensus 156 v~vDe~~CiGCg~C 169 (338)
...+...|++||.|
T Consensus 141 ~~~~~~~Ci~Cg~C 154 (243)
T 1kf6_B 141 KYHQFSGCINCGLC 154 (243)
T ss_dssp TTGGGGCCCCCCHH
T ss_pred HhhhhhhccccCcc
Confidence 34678899999999
No 87
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=32.39 E-value=7.4 Score=43.16 Aligned_cols=20 Identities=30% Similarity=1.117 Sum_probs=17.5
Q ss_pred cccCcccccCCCCccCCCCc
Q 019589 156 VFVDEFSCIGCKNCNNVAPE 175 (338)
Q Consensus 156 v~vDe~~CiGCg~C~~vap~ 175 (338)
+.++...|+|||.|+.+||.
T Consensus 737 ~~v~~~~C~gCG~Cv~vCP~ 756 (1231)
T 2c42_A 737 IQINTLDCMGCGNCADICPP 756 (1231)
T ss_dssp EEECTTTCCCCCHHHHHCSS
T ss_pred eeechhhCCChhHHHhhCCC
Confidence 34678899999999999997
No 88
>1jnr_B Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.1.5 PDB: 1jnz_B* 2fja_B* 2fjb_B* 2fjd_B* 2fje_B*
Probab=30.70 E-value=8.4 Score=31.82 Aligned_cols=25 Identities=16% Similarity=0.434 Sum_probs=19.4
Q ss_pred cccCcccccCCCCccCCCCcc-ceec
Q 019589 156 VFVDEFSCIGCKNCNNVAPEV-FKIE 180 (338)
Q Consensus 156 v~vDe~~CiGCg~C~~vap~v-F~id 180 (338)
+.++...|++|+.|+.+||.. +.+.
T Consensus 40 ~~id~~~C~~Cg~Cv~~CP~~AI~~~ 65 (150)
T 1jnr_B 40 YNREPDMCWECYSCVKMCPQGAIDVR 65 (150)
T ss_dssp EESCGGGCCCCCHHHHHCTTCCEEEC
T ss_pred eeeCcccCcCHhHHHHhCCccceEec
Confidence 357888999999999999953 4443
No 89
>2wdq_B Succinate dehydrogenase iron-sulfur subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_B* 2acz_B* 1nek_B* 2wdr_B* 2wdv_B* 2ws3_B* 2wu2_B* 2wu5_B* 2wp9_B*
Probab=30.54 E-value=15 Score=32.24 Aligned_cols=11 Identities=36% Similarity=0.845 Sum_probs=9.6
Q ss_pred CcccccCCCCc
Q 019589 159 DEFSCIGCKNC 169 (338)
Q Consensus 159 De~~CiGCg~C 169 (338)
+...|+.||.|
T Consensus 202 ~~~~C~~Cg~C 212 (238)
T 2wdq_B 202 SVFRCHSIMNC 212 (238)
T ss_dssp TTTTCCCCCHH
T ss_pred CCCcCcccchh
Confidence 56789999999
No 90
>1hfe_L Protein (Fe-only hydrogenase (E.C.1.18.99.1) (larger subunit)); hydrogene metabolism, periplasm; 1.60A {Desulfovibrio vulgaris subsp} SCOP: c.96.1.1 d.58.1.5 PDB: 1e08_A* 1gx7_A*
Probab=29.19 E-value=18 Score=35.08 Aligned_cols=19 Identities=32% Similarity=0.642 Sum_probs=16.8
Q ss_pred cCcccccCCCCccCCCCcc
Q 019589 158 VDEFSCIGCKNCNNVAPEV 176 (338)
Q Consensus 158 vDe~~CiGCg~C~~vap~v 176 (338)
++...|++||.|..+||..
T Consensus 61 ~~~~~C~~Cg~C~~~CP~~ 79 (421)
T 1hfe_L 61 PHIEACINCGQCLTHCPEN 79 (421)
T ss_dssp CCGGGCCCCCTTGGGCTTC
T ss_pred cChhhCCchhhHHHhhCcC
Confidence 3889999999999999954
No 91
>3or1_B Sulfite reductase beta; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_B* 2v4j_B* 2xsj_B*
Probab=28.83 E-value=16 Score=35.00 Aligned_cols=16 Identities=19% Similarity=0.580 Sum_probs=13.3
Q ss_pred HHHHHhCCCCcEEEec
Q 019589 199 QQAIESCPVDCIHRTS 214 (338)
Q Consensus 199 ~~Av~~CP~~aI~~~~ 214 (338)
-.++..||+.||.+.+
T Consensus 225 ~~cv~~CPt~AI~~~~ 240 (386)
T 3or1_B 225 PLAVAACPTAAVKPIT 240 (386)
T ss_dssp HHHHHHCTTCCEEEEE
T ss_pred hhhhhhCchhhccccc
Confidence 5789999999998853
No 92
>3gyx_B Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=27.69 E-value=10 Score=31.85 Aligned_cols=21 Identities=19% Similarity=0.528 Sum_probs=17.5
Q ss_pred cccCcccccCCCCccCCCCcc
Q 019589 156 VFVDEFSCIGCKNCNNVAPEV 176 (338)
Q Consensus 156 v~vDe~~CiGCg~C~~vap~v 176 (338)
+.+|...|++|+.|+.+||..
T Consensus 39 ~~~d~~~C~~Cg~Cv~~CP~~ 59 (166)
T 3gyx_B 39 FNQEPEACWECYSCIKICPQG 59 (166)
T ss_dssp EESCGGGCCCCCHHHHHCSSC
T ss_pred EecCcccCcccChHhHhCCcc
Confidence 347788999999999999843
No 93
>2bs2_B Quinol-fumarate reductase iron-sulfur subunit B; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.1.2.1 d.15.4.2 PDB: 2bs3_B* 1e7p_B* 1qlb_B* 2bs4_B*
Probab=27.64 E-value=5.5 Score=35.33 Aligned_cols=20 Identities=30% Similarity=0.781 Sum_probs=0.0
Q ss_pred CcccccCCCCccCCCCccceeccccCceeeccCCCCHHHHHHHHHhCCCCcE
Q 019589 159 DEFSCIGCKNCNNVAPEVFKIEEDFGRARVYNQCGINEFVQQAIESCPVDCI 210 (338)
Q Consensus 159 De~~CiGCg~C~~vap~vF~iddd~G~a~v~~q~g~~e~v~~Av~~CP~~aI 210 (338)
+...|++||.| +..||+.+|
T Consensus 147 ~~~~Ci~Cg~C--------------------------------~~~CP~~~~ 166 (241)
T 2bs2_B 147 ELDRCIECGCC--------------------------------IAACGTKIM 166 (241)
T ss_dssp HHHTCCCCCHH--------------------------------HHTCHHHHH
T ss_pred hhhhhhccCcC--------------------------------cccCCCCcc
No 94
>2h88_B Succinate dehydrogenase IP subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_B* 1yq3_B* 2fbw_B* 2h89_B* 2wqy_B* 3aef_B* 3abv_B* 3ae1_B* 3ae3_B* 3ae2_B* 3ae5_B* 3ae6_B* 3ae7_B* 3ae8_B* 3ae9_B* 3aea_B* 3aeb_B* 3aec_B* 3aed_B* 3aee_B* ...
Probab=27.03 E-value=18 Score=32.25 Aligned_cols=19 Identities=26% Similarity=0.688 Sum_probs=15.4
Q ss_pred cCcccccCCCCccCCCCcc
Q 019589 158 VDEFSCIGCKNCNNVAPEV 176 (338)
Q Consensus 158 vDe~~CiGCg~C~~vap~v 176 (338)
.+...||+||.|..+||..
T Consensus 153 ~~~~~Ci~CG~C~~~CP~~ 171 (252)
T 2h88_B 153 DGLYECILCACCSTSCPSY 171 (252)
T ss_dssp TTTTTCCCCCTTGGGCHHH
T ss_pred HhHHhchhhCcchhhCCCC
Confidence 3556899999999999853
No 95
>2wdq_B Succinate dehydrogenase iron-sulfur subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_B* 2acz_B* 1nek_B* 2wdr_B* 2wdv_B* 2ws3_B* 2wu2_B* 2wu5_B* 2wp9_B*
Probab=26.39 E-value=19 Score=31.62 Aligned_cols=20 Identities=25% Similarity=0.707 Sum_probs=16.6
Q ss_pred ccCcccccCCCCccCCCCcc
Q 019589 157 FVDEFSCIGCKNCNNVAPEV 176 (338)
Q Consensus 157 ~vDe~~CiGCg~C~~vap~v 176 (338)
..+...||+||.|..+||..
T Consensus 143 ~~~~~~Ci~Cg~C~~~CP~~ 162 (238)
T 2wdq_B 143 LDGLYECILCACCSTSCPSF 162 (238)
T ss_dssp TTTTTTCCCCCTTGGGCHHH
T ss_pred HhccccccccCCchhhCcCC
Confidence 45678899999999999854
No 96
>1kf6_B Fumarate reductase iron-sulfur protein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.1.2.1 d.15.4.2 PDB: 1kfy_B* 1l0v_B* 2b76_B* 3cir_B* 3p4p_B* 3p4q_B* 3p4r_B* 3p4s_B*
Probab=24.97 E-value=23 Score=31.18 Aligned_cols=11 Identities=27% Similarity=0.567 Sum_probs=9.6
Q ss_pred CcccccCCCCc
Q 019589 159 DEFSCIGCKNC 169 (338)
Q Consensus 159 De~~CiGCg~C 169 (338)
+...|++||.|
T Consensus 200 ~~~~C~~Cg~C 210 (243)
T 1kf6_B 200 GVWSCTFVGYC 210 (243)
T ss_dssp TGGGCCCCCHH
T ss_pred CcccCcccCCc
Confidence 45789999999
No 97
>2l53_B CAM, voltage-gated sodium channel type V alpha isoform variant; calmodulin, IQ motif, complex, Ca-binding protein; NMR {Homo sapiens}
Probab=23.19 E-value=45 Score=20.32 Aligned_cols=19 Identities=16% Similarity=0.107 Sum_probs=14.6
Q ss_pred HHHHHHhhhHHHhhhcCCC
Q 019589 305 RAAAAARRWREYSRRGADQ 323 (338)
Q Consensus 305 ~~aa~~r~~~~~~~~~~~~ 323 (338)
-|..+-|+||.|..++..+
T Consensus 8 aA~vIQrA~R~yl~rr~~~ 26 (31)
T 2l53_B 8 SAMVIQRAFRRHLLQRSLK 26 (31)
T ss_dssp HHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHHHhhc
Confidence 3456889999999887654
No 98
>3vr8_B Iron-sulfur subunit of succinate dehydrogenase; membrane protein, reductase, mitochondria MEMB oxidoreductase; HET: FAD HEM RQX EPH; 2.81A {Ascaris suum} PDB: 3vrb_B*
Probab=23.19 E-value=31 Score=31.67 Aligned_cols=15 Identities=33% Similarity=1.001 Sum_probs=11.5
Q ss_pred ccccCCCCccCCCCc
Q 019589 161 FSCIGCKNCNNVAPE 175 (338)
Q Consensus 161 ~~CiGCg~C~~vap~ 175 (338)
..||.||.|...||.
T Consensus 180 ~~CI~CG~C~~aCP~ 194 (282)
T 3vr8_B 180 YECILCACCSASCPS 194 (282)
T ss_pred hhCcccCcCcccCCc
Confidence 569999999666554
No 99
>3mm5_A Sulfite reductase, dissimilatory-type subunit ALP; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3mm6_A* 3mm7_A* 3mm8_A* 3mm9_A* 3mma_A* 3mmb_A* 3mmc_A* 3c7b_A*
Probab=23.12 E-value=13 Score=36.22 Aligned_cols=26 Identities=19% Similarity=0.496 Sum_probs=14.5
Q ss_pred HHHHHhCCCCcEEEecCcchhhhHHHH
Q 019589 199 QQAIESCPVDCIHRTSAQQLSLLEDEM 225 (338)
Q Consensus 199 ~~Av~~CP~~aI~~~~~~~~~~Le~~~ 225 (338)
..+++.||++||.+.+ ..+.+-+..|
T Consensus 261 ~~cv~~CPt~Ai~~~~-~~~~id~~~C 286 (418)
T 3mm5_A 261 NEVVKLCPTGAIKWDG-KELTIDNREC 286 (418)
T ss_dssp HHTGGGCTTCCEEECS-SCEEECTTTC
T ss_pred ccccccCCccccccCC-ceeEEChhhc
Confidence 4567777777777753 3444433333
No 100
>1qqr_A Streptokinase domain B; non-proteolytic, plasminogen activation, fibrinolysis, hydrolase activator; 2.30A {Streptococcus dysgalactiae subsp} SCOP: d.15.5.1 PDB: 1c4p_A
Probab=21.57 E-value=43 Score=27.44 Aligned_cols=32 Identities=13% Similarity=0.199 Sum_probs=28.7
Q ss_pred CcccccCCCCCCCHHHHHHHHHHHHHhcCCCC
Q 019589 71 DYYAVLGLLPDATPEQIKKAYYNCMKACHPDL 102 (338)
Q Consensus 71 d~Y~vLgv~~~as~~eIk~aYr~l~~~~HPD~ 102 (338)
-++..|-|....+.+|++++=..+..++|||-
T Consensus 33 ~~l~~k~ig~~Its~eL~~~AqeiL~q~hp~Y 64 (138)
T 1qqr_A 33 KLLKTLAIGDTITSQELLAQAQSILNKNHPGY 64 (138)
T ss_dssp EEEEEECTTCEEEHHHHHHHHHHHHHHHSTTE
T ss_pred hhhcccccCcccCHHHHHHHHHHHHHhcCCCc
Confidence 45788889999999999999999999999985
Done!