Query 019589
Match_columns 338
No_of_seqs 471 out of 2825
Neff 6.7
Searched_HMMs 13730
Date Mon Mar 25 04:07:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019589.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/019589hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1xbla_ a.2.3.1 (A:) DnaJ chap 99.9 7.6E-23 5.5E-27 154.4 8.5 69 69-137 2-70 (75)
2 d1hdja_ a.2.3.1 (A:) HSP40 {Hu 99.8 2.8E-21 2E-25 146.4 8.4 69 69-138 2-70 (77)
3 d1wjza_ a.2.3.1 (A:) CSL-type 99.8 3.7E-20 2.7E-24 145.4 6.7 70 67-136 13-88 (94)
4 d1gh6a_ a.2.3.1 (A:) Large T a 99.8 3.8E-20 2.8E-24 150.2 1.8 65 69-137 7-73 (114)
5 d1fafa_ a.2.3.1 (A:) Large T a 99.7 3.9E-18 2.8E-22 129.3 4.0 65 68-136 9-75 (79)
6 d1fpoa1 a.2.3.1 (A:1-76) HSC20 99.7 1.3E-17 9.6E-22 125.5 4.8 66 70-135 1-73 (76)
7 d1nz6a_ a.2.3.1 (A:) Auxilin J 99.6 9.1E-17 6.6E-21 126.7 2.7 66 67-132 30-98 (98)
8 d1iura_ a.2.3.1 (A:) Hypotheti 99.6 2E-16 1.5E-20 122.2 2.7 65 68-135 14-79 (88)
9 d1fxra_ d.58.1.4 (A:) Ferredox 99.3 8.2E-13 6E-17 95.4 4.3 62 154-215 2-64 (64)
10 d1iqza_ d.58.1.4 (A:) Ferredox 99.1 2.4E-11 1.8E-15 91.6 3.4 62 154-216 2-72 (81)
11 d1fxda_ d.58.1.4 (A:) Ferredox 99.0 1.7E-10 1.2E-14 81.4 3.6 56 156-212 2-57 (58)
12 d1vjwa_ d.58.1.4 (A:) Ferredox 98.9 2.4E-10 1.7E-14 80.8 2.7 58 155-213 2-59 (59)
13 d1sj1a_ d.58.1.4 (A:) Fe3S4-fe 98.9 2.2E-10 1.6E-14 82.6 2.0 59 155-214 3-65 (66)
14 d1hfel2 d.58.1.5 (L:2-86) Fe-o 97.1 6.6E-05 4.8E-09 55.9 1.6 54 155-214 26-84 (85)
15 d1xera_ d.58.1.3 (A:) Ferredox 97.1 1.5E-05 1.1E-09 61.5 -2.2 60 154-214 36-102 (103)
16 d3c8ya3 d.58.1.5 (A:127-209) F 96.5 7E-05 5.1E-09 55.2 -2.4 60 154-213 12-82 (83)
17 d2fdna_ d.58.1.1 (A:) Ferredox 96.5 0.00029 2.1E-08 47.9 0.8 51 157-211 2-53 (55)
18 d1bc6a_ d.58.1.2 (A:) Ferredox 96.4 0.0016 1.2E-07 47.1 4.8 52 157-216 2-60 (77)
19 d1jnrb_ d.58.1.5 (B:) Adenylyl 96.4 0.00056 4E-08 55.9 2.4 59 156-215 2-66 (149)
20 d1gtea5 d.58.1.5 (A:845-1017) 96.4 9.9E-05 7.2E-09 62.2 -2.6 62 155-217 101-165 (173)
21 d1blua_ d.58.1.1 (A:) Ferredox 96.4 0.0022 1.6E-07 46.8 5.2 72 157-231 2-78 (80)
22 d1h98a_ d.58.1.2 (A:) Ferredox 96.3 0.0012 8.8E-08 47.9 3.3 14 202-215 46-59 (77)
23 d7fd1a_ d.58.1.2 (A:) Ferredox 96.1 0.0014 1E-07 50.5 3.2 22 202-223 46-67 (106)
24 d1dura_ d.58.1.1 (A:) Ferredox 96.1 0.0011 7.8E-08 45.0 2.0 53 157-214 2-55 (55)
25 d1rgva_ d.58.1.1 (A:) Ferredox 96.0 0.0044 3.2E-07 45.1 5.3 53 160-213 5-61 (80)
26 d2fug91 d.58.1.5 (9:26-179) NA 95.6 0.0017 1.2E-07 53.0 1.6 31 157-219 67-97 (154)
27 d1vlfn2 d.58.1.5 (N:1-195) Tra 95.4 0.0043 3.1E-07 52.6 3.4 61 153-216 89-160 (195)
28 d1kqfb1 d.58.1.5 (B:2-245) For 95.1 0.003 2.2E-07 55.6 1.6 62 153-217 122-190 (244)
29 d3c7bb1 d.58.1.5 (B:197-261) D 94.4 0.0043 3.2E-07 43.4 0.7 16 154-169 36-51 (65)
30 d2fug34 d.58.1.5 (3:96-246) NA 94.3 0.0015 1.1E-07 53.5 -2.4 58 154-211 77-141 (151)
31 d1jb0c_ d.58.1.2 (C:) Photosys 93.9 0.0057 4.2E-07 44.2 0.5 59 156-214 3-66 (80)
32 d2c42a5 d.58.1.5 (A:669-785) P 92.8 0.02 1.4E-06 44.1 2.0 29 155-215 69-99 (117)
33 d1jb0c_ d.58.1.2 (C:) Photosys 92.6 0.016 1.2E-06 41.6 1.2 16 200-215 15-30 (80)
34 d1dura_ d.58.1.1 (A:) Ferredox 92.4 0.021 1.5E-06 38.2 1.5 17 158-174 31-47 (55)
35 d1y5ib1 d.58.1.5 (B:1-509) Res 92.3 0.017 1.2E-06 55.8 1.2 59 154-214 208-272 (509)
36 d1h98a_ d.58.1.2 (A:) Ferredox 91.7 0.028 2E-06 40.3 1.5 24 202-226 17-40 (77)
37 d2fug91 d.58.1.5 (9:26-179) NA 91.6 0.041 3E-06 44.3 2.6 24 159-214 24-47 (154)
38 d2c42a5 d.58.1.5 (A:669-785) P 91.3 0.036 2.6E-06 42.5 1.8 14 156-169 14-27 (117)
39 d7fd1a_ d.58.1.2 (A:) Ferredox 91.1 0.037 2.7E-06 42.1 1.7 37 157-226 2-40 (106)
40 d1h0hb_ d.58.1.5 (B:) Tungsten 83.0 0.1 7.3E-06 44.4 -0.3 52 161-215 108-166 (214)
41 d1bc6a_ d.58.1.2 (A:) Ferredox 75.1 0.26 1.9E-05 34.8 -0.2 23 154-176 30-52 (77)
42 d1hfel2 d.58.1.5 (L:2-86) Fe-o 72.4 0.84 6.1E-05 32.5 2.1 23 154-176 56-78 (85)
43 d2v4jb1 d.58.1.5 (B:209-277) D 68.1 0.38 2.7E-05 33.4 -0.7 23 154-176 41-63 (69)
44 d2fdna_ d.58.1.1 (A:) Ferredox 66.0 0.66 4.8E-05 30.3 0.3 22 155-176 29-50 (55)
45 d2v4ja1 d.58.1.5 (A:242-322) D 64.0 0.38 2.7E-05 34.5 -1.4 37 198-235 36-73 (81)
46 d1gtea5 d.58.1.5 (A:845-1017) 60.3 0.75 5.5E-05 37.4 -0.4 27 154-180 133-161 (173)
47 d3c7ba1 d.58.1.5 (A:239-304) D 52.2 2.3 0.00016 29.1 1.1 34 200-234 23-57 (66)
48 d1xera_ d.58.1.3 (A:) Ferredox 51.7 1.2 8.5E-05 32.8 -0.5 22 155-176 75-96 (103)
49 d3c8ya3 d.58.1.5 (A:127-209) F 47.8 1.4 0.0001 30.8 -0.6 21 156-176 57-77 (83)
50 d1kqfb1 d.58.1.5 (B:2-245) For 43.9 4.4 0.00032 34.4 1.9 55 160-216 96-153 (244)
51 d1jnrb_ d.58.1.5 (B:) Adenylyl 43.5 1.8 0.00013 33.8 -0.6 24 156-179 39-63 (149)
52 d1nekb1 a.1.2.1 (B:107-238) Su 41.3 2.2 0.00016 32.5 -0.5 18 159-176 39-56 (132)
53 d2gmha3 d.58.1.6 (A:483-584) E 36.7 8.3 0.0006 28.3 2.2 29 155-215 63-91 (102)
54 d1y5ib1 d.58.1.5 (B:1-509) Res 34.4 9.7 0.00071 35.7 2.9 58 155-214 176-236 (509)
55 d2b7ea1 a.159.2.1 (A:4-59) Pre 29.6 43 0.0031 21.6 4.7 48 86-136 1-53 (56)
56 d1rgva_ d.58.1.1 (A:) Ferredox 28.1 5.1 0.00037 27.8 -0.3 22 155-176 29-56 (80)
57 d2bs2b1 a.1.2.1 (B:107-239) Fu 28.0 8.3 0.00061 28.8 0.9 9 161-169 100-108 (133)
58 d1vlfn2 d.58.1.5 (N:1-195) Tra 23.1 21 0.0015 28.6 2.7 54 160-216 65-120 (195)
59 d1kf6b1 a.1.2.1 (B:106-243) Fu 22.8 12 0.00087 28.5 0.9 9 161-169 97-105 (138)
No 1
>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]}
Probab=99.87 E-value=7.6e-23 Score=154.43 Aligned_cols=69 Identities=35% Similarity=0.537 Sum_probs=65.7
Q ss_pred cCCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChhHHHHHHHHHHHHHHcCChhHhhhhhhhcc
Q 019589 69 ADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYDEIHG 137 (338)
Q Consensus 69 ~~d~Y~vLgv~~~as~~eIk~aYr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~G 137 (338)
.+|||+||||++++|.++||+||++|+++||||++++++.+++.|..|++||+||+||.+|..||.+|.
T Consensus 2 k~dyY~vLgv~~~As~~eIk~aYr~l~~~~HPDk~~~~~~~~~~f~~i~~Ay~vL~d~~~R~~YD~~g~ 70 (75)
T d1xbla_ 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGH 70 (75)
T ss_dssp CCCTTTTTCCSSSCCHHHHHHHHHHHHHHTCCTTCTTTCHHHHHHHHHHHHHHHTTSSHHHHHHHHHTT
T ss_pred CCCHHHHcCCCCCcCHHHHHHHHHHHHhhhhhhccCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHhCc
Confidence 469999999999999999999999999999999998878888999999999999999999999999864
No 2
>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=2.8e-21 Score=146.40 Aligned_cols=69 Identities=38% Similarity=0.574 Sum_probs=64.7
Q ss_pred cCCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChhHHHHHHHHHHHHHHcCChhHhhhhhhhccc
Q 019589 69 ADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYDEIHGY 138 (338)
Q Consensus 69 ~~d~Y~vLgv~~~as~~eIk~aYr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~G~ 138 (338)
.+|||+||||++++|.++|++||+++++++|||++.. +++.+.|..|++||+||+||.+|..||++|..
T Consensus 2 ~kdyY~iLgv~~~as~~eIk~ay~~l~~~~hPD~~~~-~~~~~~~~~i~~Ay~vLsdp~~R~~YD~~g~~ 70 (77)
T d1hdja_ 2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKE-PGAEEKFKEIAEAYDVLSDPRKREIFDRYGEE 70 (77)
T ss_dssp CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCC-TTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGG
T ss_pred CCChHHHcCCCCCcCHHHHHHHHHHHHHHhccccccc-hhHHHHHHHHHHHHHHhcCHHHHHHHHhhhhh
Confidence 4799999999999999999999999999999999887 67889999999999999999999999998654
No 3
>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.79 E-value=3.7e-20 Score=145.37 Aligned_cols=70 Identities=24% Similarity=0.458 Sum_probs=63.4
Q ss_pred CccCCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCC------hhHHHHHHHHHHHHHHcCChhHhhhhhhhc
Q 019589 67 AIADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDD------PETTNFCMFINEVYAVLSDPVQRMVYDEIH 136 (338)
Q Consensus 67 ~~~~d~Y~vLgv~~~as~~eIk~aYr~l~~~~HPD~~~~~------~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~ 136 (338)
....|||+||||+++++.++||++|++|+++||||++... +.+++.|+.|++||+||+||.+|..||...
T Consensus 13 ~~~~d~Y~iLgv~~~as~~eIk~aY~~l~~~~HPDk~~~~~~~~~~~~a~~~f~~I~~Ay~vL~d~~~R~~YD~~~ 88 (94)
T d1wjza_ 13 TLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQR 88 (94)
T ss_dssp SSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHS
T ss_pred hhccChHHHcCCCCCcCHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHcc
Confidence 3567999999999999999999999999999999998663 346788999999999999999999999863
No 4
>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]}
Probab=99.76 E-value=3.8e-20 Score=150.20 Aligned_cols=65 Identities=28% Similarity=0.378 Sum_probs=59.6
Q ss_pred cCCcccccCCCCCC--CHHHHHHHHHHHHHhcCCCCCCCChhHHHHHHHHHHHHHHcCChhHhhhhhhhcc
Q 019589 69 ADDYYAVLGLLPDA--TPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYDEIHG 137 (338)
Q Consensus 69 ~~d~Y~vLgv~~~a--s~~eIk~aYr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~G 137 (338)
..+||+||||+++| +.++||+|||+|+++||||++++ .+.|++|++||+||+||.+|..||.++.
T Consensus 7 ~~~ly~iLGv~~~a~~~~~~IKkAYrkla~k~HPDk~~~----~e~F~~I~~AY~vLsd~~kR~~YD~~~~ 73 (114)
T d1gh6a_ 7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDFGG 73 (114)
T ss_dssp HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT----TTTTHHHHHHHHHHHHHHHSCCSSCCSC
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHhcccchhh----HHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 46899999999998 78899999999999999999876 3579999999999999999999998754
No 5
>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]}
Probab=99.69 E-value=3.9e-18 Score=129.32 Aligned_cols=65 Identities=15% Similarity=0.188 Sum_probs=59.4
Q ss_pred ccCCcccccCCCCCC--CHHHHHHHHHHHHHhcCCCCCCCChhHHHHHHHHHHHHHHcCChhHhhhhhhhc
Q 019589 68 IADDYYAVLGLLPDA--TPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYDEIH 136 (338)
Q Consensus 68 ~~~d~Y~vLgv~~~a--s~~eIk~aYr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsdp~~R~~YD~~~ 136 (338)
...+||+||||++++ +.++||+|||++++++|||++++ .+.|++||+||++|+|+.+|..||..+
T Consensus 9 ~~~~~y~iLgl~~~~~~~~~~IkkaYr~l~~~~HPDk~g~----~e~~~~in~Ay~~L~d~~~r~~~~~~~ 75 (79)
T d1fafa_ 9 DKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS----HALMQELNSLWGTFKTEVYNLRMNLGG 75 (79)
T ss_dssp HHHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC----HHHHHHHHHHHHHHHHHHHHHTTCCSS
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHhCcccCCC----HHHHHHHHHHHHHHCCHHHHHHHccCC
Confidence 346899999999987 99999999999999999999865 468999999999999999999999854
No 6
>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]}
Probab=99.67 E-value=1.3e-17 Score=125.48 Aligned_cols=66 Identities=20% Similarity=0.361 Sum_probs=57.9
Q ss_pred CCcccccCCCCC--CCHHHHHHHHHHHHHhcCCCCCCCCh-----hHHHHHHHHHHHHHHcCChhHhhhhhhh
Q 019589 70 DDYYAVLGLLPD--ATPEQIKKAYYNCMKACHPDLSGDDP-----ETTNFCMFINEVYAVLSDPVQRMVYDEI 135 (338)
Q Consensus 70 ~d~Y~vLgv~~~--as~~eIk~aYr~l~~~~HPD~~~~~~-----~a~~~f~~i~~Ay~vLsdp~~R~~YD~~ 135 (338)
.|||+||||+++ ++.++||++|+++++++|||+..+.+ .+...|..|++||+||+||.+|..|+..
T Consensus 1 lnyy~lLgl~~~~~~d~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~a~~~~~~i~~Ay~vL~dp~~R~~Yll~ 73 (76)
T d1fpoa1 1 MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLS 73 (76)
T ss_dssp CHHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred CChHHHCCCCCCCCCCHHHHHHHHHHHHHHhCccccccchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 389999999985 45899999999999999999976643 2567889999999999999999999863
No 7
>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.60 E-value=9.1e-17 Score=126.67 Aligned_cols=66 Identities=24% Similarity=0.427 Sum_probs=59.5
Q ss_pred CccCCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCh---hHHHHHHHHHHHHHHcCChhHhhhh
Q 019589 67 AIADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDP---ETTNFCMFINEVYAVLSDPVQRMVY 132 (338)
Q Consensus 67 ~~~~d~Y~vLgv~~~as~~eIk~aYr~l~~~~HPD~~~~~~---~a~~~f~~i~~Ay~vLsdp~~R~~Y 132 (338)
+...++|++|||...+|.++||+|||++++.||||++.+.. .++..|+.|++||++|+||.+|..|
T Consensus 30 ~~~~~~y~~Lgl~~~~t~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~I~~Ay~~L~d~~~R~~Y 98 (98)
T d1nz6a_ 30 WAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 98 (98)
T ss_dssp CTTCCSCCCCCGGGCCSHHHHHHHHHHHHHHSCHHHHTTSTTHHHHHHHHHHHHHHHHHHHTTTCCCCC
T ss_pred CCcccCCeecCCCccCCHHHHHHHHHHHHHHhccccCCChHHHHHHHHHHHHHHHHHHHHCCHHHHhcC
Confidence 34567899999999999999999999999999999987643 2678999999999999999999988
No 8
>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=2e-16 Score=122.17 Aligned_cols=65 Identities=14% Similarity=0.117 Sum_probs=57.5
Q ss_pred ccCCcccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCh-hHHHHHHHHHHHHHHcCChhHhhhhhhh
Q 019589 68 IADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDP-ETTNFCMFINEVYAVLSDPVQRMVYDEI 135 (338)
Q Consensus 68 ~~~d~Y~vLgv~~~as~~eIk~aYr~l~~~~HPD~~~~~~-~a~~~f~~i~~Ay~vLsdp~~R~~YD~~ 135 (338)
...++|+||||+.++|.++||+|||+|+++||||+++++. .+++.|+.|++||++|++ +..||+.
T Consensus 14 ~~~~~y~iL~v~~~as~~eIKkAYrrl~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~~---~~~~d~~ 79 (88)
T d1iura_ 14 ILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEK---QAFLDQN 79 (88)
T ss_dssp CHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHH---HTTCSSS
T ss_pred HHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHH---HHHhhcc
Confidence 4579999999999999999999999999999999998764 478999999999999964 5666654
No 9
>d1fxra_ d.58.1.4 (A:) Ferredoxin I {Sulfate-reducing bacteria (Desulfovibrio africanus) [TaxId: 873]}
Probab=99.29 E-value=8.2e-13 Score=95.42 Aligned_cols=62 Identities=32% Similarity=0.744 Sum_probs=55.8
Q ss_pred CccccCcccccCCCCccCCCCccceeccccCceeeccCC-CCHHHHHHHHHhCCCCcEEEecC
Q 019589 154 DHVFVDEFSCIGCKNCNNVAPEVFKIEEDFGRARVYNQC-GINEFVQQAIESCPVDCIHRTSA 215 (338)
Q Consensus 154 ~~v~vDe~~CiGCg~C~~vap~vF~iddd~G~a~v~~q~-g~~e~v~~Av~~CP~~aI~~~~~ 215 (338)
..+|||+..|+|||.|+.++|.+|.++++.|.++++.+. +..+.+.++++.||++||+|++.
T Consensus 2 ~~~~VD~~~CigCg~C~~~cP~~f~~~~~~~~~~~~~~~~~~c~~c~~c~~~CP~~aI~~~e~ 64 (64)
T d1fxra_ 2 RKFYVDQDECIACESCVEIAPGAFAMDPEIEKAYVKDVEGASQEEVEEAMDTCPVQCIHWEDE 64 (64)
T ss_dssp CEEEECTTTCCCCCHHHHHCTTTEEEETTTTEEEESCTTSSCHHHHHHHHHHCTTCCEEEECC
T ss_pred CeEEEchhhCccCCCccccCcCeEEEecCCCeeeeeccCCCcchhHHHHHhcCCcccEEEEeC
Confidence 357999999999999999999999999999999998774 45678999999999999999864
No 10
>d1iqza_ d.58.1.4 (A:) Ferredoxin {Bacillus thermoproteolyticus [TaxId: 1427]}
Probab=99.07 E-value=2.4e-11 Score=91.65 Aligned_cols=62 Identities=31% Similarity=0.574 Sum_probs=52.7
Q ss_pred CccccCcccccCCCCccCCCCccceeccccCceeeccCC---------CCHHHHHHHHHhCCCCcEEEecCc
Q 019589 154 DHVFVDEFSCIGCKNCNNVAPEVFKIEEDFGRARVYNQC---------GINEFVQQAIESCPVDCIHRTSAQ 216 (338)
Q Consensus 154 ~~v~vDe~~CiGCg~C~~vap~vF~iddd~G~a~v~~q~---------g~~e~v~~Av~~CP~~aI~~~~~~ 216 (338)
.+++||...|||||.|+.+||++|.++++ |.+.+..+. +..+.+.+|++.||++||++++.+
T Consensus 2 ~~v~VD~~~CigCg~C~~~cP~~f~~~~d-g~~~~~~~~~~~~~~v~~~~~~~~~~aa~~CP~~AI~v~d~p 72 (81)
T d1iqza_ 2 KYTIVDKETCIACGACGAAAPDIYDYDED-GIAYVTLDDNQGIVEVPDILIDDMMDAFEGCPTDSIKVADEP 72 (81)
T ss_dssp CEEEECTTTCCCCSHHHHHCTTTEEECTT-SCEEETTTTTSSCSCCCGGGHHHHHHHHHHCTTCCEEEESSC
T ss_pred cEEEEeHHHCcCcChHhHhCchheeEcCC-CeEEEeecCCcCcccCCHHHHHHHHHHHHhCCcccEEEEeCC
Confidence 36789999999999999999999999876 888776542 234689999999999999999875
No 11
>d1fxda_ d.58.1.4 (A:) Ferredoxin I {Desulfovibrio gigas [TaxId: 879]}
Probab=98.95 E-value=1.7e-10 Score=81.43 Aligned_cols=56 Identities=34% Similarity=0.696 Sum_probs=47.9
Q ss_pred cccCcccccCCCCccCCCCccceeccccCceeeccCCCCHHHHHHHHHhCCCCcEEE
Q 019589 156 VFVDEFSCIGCKNCNNVAPEVFKIEEDFGRARVYNQCGINEFVQQAIESCPVDCIHR 212 (338)
Q Consensus 156 v~vDe~~CiGCg~C~~vap~vF~iddd~G~a~v~~q~g~~e~v~~Av~~CP~~aI~~ 212 (338)
++++ +.|||||.|+.+||++|.++++.+...+..+.+..+.+.++++.|||+||+.
T Consensus 2 v~v~-e~CigCg~C~~~CP~~~~~~~~g~~~~~~~~~~~~~~c~~c~~~CP~~AIs~ 57 (58)
T d1fxda_ 2 IEVN-DDCMACEACVEICPDVFEMNEEGDKAVVINPDSDLDCVEEAIDSCPAEAIVR 57 (58)
T ss_dssp EEEC-TTCCCCCHHHHHCTTTEEECSSSSSEEESCTTCCCHHHHHHHHHCTTCCEEE
T ss_pred eeEC-ccCcChhhHHHHcChhheEcCCCCEEEEecCCCCcHHHHHHhhcCChhcEEC
Confidence 4566 5799999999999999999998666666666777788999999999999986
No 12
>d1vjwa_ d.58.1.4 (A:) Ferredoxin A {Thermotoga maritima [TaxId: 2336]}
Probab=98.90 E-value=2.4e-10 Score=80.78 Aligned_cols=58 Identities=36% Similarity=0.704 Sum_probs=51.7
Q ss_pred ccccCcccccCCCCccCCCCccceeccccCceeeccCCCCHHHHHHHHHhCCCCcEEEe
Q 019589 155 HVFVDEFSCIGCKNCNNVAPEVFKIEEDFGRARVYNQCGINEFVQQAIESCPVDCIHRT 213 (338)
Q Consensus 155 ~v~vDe~~CiGCg~C~~vap~vF~iddd~G~a~v~~q~g~~e~v~~Av~~CP~~aI~~~ 213 (338)
.+.+|.+.|+|||.|..++|+.|.++++ |++.+..+.+....+..+++.||++||+|+
T Consensus 2 rv~iD~~~C~~Cg~C~~~cP~~~~~~~~-g~~~~~~~~~~c~~c~~c~~~CP~~AI~ie 59 (59)
T d1vjwa_ 2 KVRVDADACIGCGVCENLCPDVFQLGDD-GKAKVLQPETDLPCAKDAADSCPTGAISVE 59 (59)
T ss_dssp BCEECTTTCCCCCHHHHHCTTTEEECTT-SSEEESCSBCCCTHHHHHHHHCTTCCEEC-
T ss_pred EEEEeHHHCCCCCCChHhCchheEEccc-eeeEEecChHHCcCcCcccCccCcccEEeC
Confidence 4678999999999999999999999876 888888887777889999999999999874
No 13
>d1sj1a_ d.58.1.4 (A:) Fe3S4-ferredoxin PF1909 {Pyrococcus furiosus [TaxId: 2261]}
Probab=98.88 E-value=2.2e-10 Score=82.65 Aligned_cols=59 Identities=31% Similarity=0.598 Sum_probs=48.5
Q ss_pred ccccCcccccCCCCccCCCCccceeccccCceeeccCCC-C---HHHHHHHHHhCCCCcEEEec
Q 019589 155 HVFVDEFSCIGCKNCNNVAPEVFKIEEDFGRARVYNQCG-I---NEFVQQAIESCPVDCIHRTS 214 (338)
Q Consensus 155 ~v~vDe~~CiGCg~C~~vap~vF~iddd~G~a~v~~q~g-~---~e~v~~Av~~CP~~aI~~~~ 214 (338)
.+.+|.+.|+|||.|+.+||++|.++++ |.+.++.+.. + ...+..+++.||++||++.+
T Consensus 3 ki~vD~~~Ci~Cg~C~~~CP~~~~~~~~-~~~~~~~~~~~~~~~c~~c~~c~~~CP~~AI~i~e 65 (66)
T d1sj1a_ 3 KVSVDQDTCIGDAICASLCPDVFEMNDE-GKAQPKVEVIEDEELYNCAKEAMEACPVSAITIEE 65 (66)
T ss_dssp EEEECTTTCCCCCHHHHHCTTTEEECTT-SCEEESCSCBCCHHHHHHHHHHHHHCTTCCEEEEE
T ss_pred EEEEeHHHCCCcChhhhhCCceEEEccc-CceEeeccccCChHHHhhhCHhhccCCcccEEEEe
Confidence 4678999999999999999999999877 6666655422 2 34678999999999999976
No 14
>d1hfel2 d.58.1.5 (L:2-86) Fe-only hydrogenase larger subunit, N-domain {Desulfovibrio desulfuricans [TaxId: 876]}
Probab=97.11 E-value=6.6e-05 Score=55.89 Aligned_cols=54 Identities=28% Similarity=0.558 Sum_probs=37.1
Q ss_pred ccccCcccccCCCCccCCCCcc-ceeccccCceeeccC----CCCHHHHHHHHHhCCCCcEEEec
Q 019589 155 HVFVDEFSCIGCKNCNNVAPEV-FKIEEDFGRARVYNQ----CGINEFVQQAIESCPVDCIHRTS 214 (338)
Q Consensus 155 ~v~vDe~~CiGCg~C~~vap~v-F~iddd~G~a~v~~q----~g~~e~v~~Av~~CP~~aI~~~~ 214 (338)
.+.+|.+.|++||.|+.+||.. +.++++.+...+-.. .|. .+..||++||+...
T Consensus 26 ~~~id~~~Ci~C~~Cv~~Cp~~ai~~~~~~~~~~~~~~~C~~Cg~------C~~~CP~~AI~~~~ 84 (85)
T d1hfel2 26 FVQIDEAKCIGCDTCSQYCPTAAIFGEMGEPHSIPHIEACINCGQ------CLTHCPENAIYEAQ 84 (85)
T ss_dssp SEEECTTTCCCCCHHHHHCTTCCCBCCTTSCCBCCCGGGCCCCCT------TGGGCTTCCEEESC
T ss_pred eEEEcHHHCCCchhHHHHCCccCEEeecCCceEeCChhHCCCcCh------hhhhCCccceEecc
Confidence 4557999999999999999943 444444333222111 344 49999999998753
No 15
>d1xera_ d.58.1.3 (A:) Ferredoxin {Archaeon Sulfolobus sp. [TaxId: 2288]}
Probab=97.09 E-value=1.5e-05 Score=61.53 Aligned_cols=60 Identities=30% Similarity=0.427 Sum_probs=39.0
Q ss_pred CccccCcccccCCCCccCCCC-ccceeccccC------ceeeccCCCCHHHHHHHHHhCCCCcEEEec
Q 019589 154 DHVFVDEFSCIGCKNCNNVAP-EVFKIEEDFG------RARVYNQCGINEFVQQAIESCPVDCIHRTS 214 (338)
Q Consensus 154 ~~v~vDe~~CiGCg~C~~vap-~vF~iddd~G------~a~v~~q~g~~e~v~~Av~~CP~~aI~~~~ 214 (338)
..+.+|...|++|+.|..+|| +.+.+.+..+ ....+.. ......-..++.||++||++..
T Consensus 36 ~~~~iD~~~Ci~Cg~C~~~CP~~ai~~~~~~~~~~~~~~~~~i~~-~~C~~Cg~C~~~CP~~AI~~~~ 102 (103)
T d1xera_ 36 TIVGVDFDLCIADGSCINACPVNVFQWYDTPGHPASEKKADPVNE-QACIFCMACVNVCPVAAIDVKP 102 (103)
T ss_dssp SSEEEETTTCCCCCHHHHHCTTCCCEEEECTTCSSCSEEEECTTG-GGCCCCCHHHHHCTTCCEEECC
T ss_pred cEEEECHHHCcCcCcccccCcccceeeeccccccccccceeEecc-ccCCCcChHHhhcCccceEeeC
Confidence 356789999999999999998 5555443221 1111211 1111233579999999999864
No 16
>d3c8ya3 d.58.1.5 (A:127-209) Fe-only hydrogenase, second domain {Clostridium pasteurianum [TaxId: 1501]}
Probab=96.52 E-value=7e-05 Score=55.18 Aligned_cols=60 Identities=20% Similarity=0.349 Sum_probs=37.0
Q ss_pred CccccCcccccCCCCccCCCCccce-----eccccCceeeccC--C----CCHHHHHHHHHhCCCCcEEEe
Q 019589 154 DHVFVDEFSCIGCKNCNNVAPEVFK-----IEEDFGRARVYNQ--C----GINEFVQQAIESCPVDCIHRT 213 (338)
Q Consensus 154 ~~v~vDe~~CiGCg~C~~vap~vF~-----iddd~G~a~v~~q--~----g~~e~v~~Av~~CP~~aI~~~ 213 (338)
..+.+|...||+|+.|+.+||.... +....+...+... . ......-..++.|||+||...
T Consensus 12 ~~i~iD~~kCI~C~~Cv~aCp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~Cg~Cv~vCP~gAi~~k 82 (83)
T d3c8ya3 12 KSLTVDRTKCLLCGRCVNACGKNTETYAMKFLNKNGKTIIGAEDEKCFDDTNCLLCGQCIIACPVAALSEK 82 (83)
T ss_dssp SSEEEEGGGCCCCCHHHHHHHHHHSCCCSEEEEETTEEEEESGGGCCGGGSSCCCCCHHHHHCSSTTEEEC
T ss_pred CCEEEchhHCCCCchHHHhhcccccccceeeeccccceEEcccccccccccccccCCHHHhhCCCCccccc
Confidence 4577899999999999999984321 1222222222111 1 111223468999999999864
No 17
>d2fdna_ d.58.1.1 (A:) Ferredoxin II {Clostridium acidurici [TaxId: 1556]}
Probab=96.48 E-value=0.00029 Score=47.92 Aligned_cols=51 Identities=24% Similarity=0.426 Sum_probs=32.7
Q ss_pred ccCcccccCCCCccCCCC-ccceeccccCceeeccCCCCHHHHHHHHHhCCCCcEE
Q 019589 157 FVDEFSCIGCKNCNNVAP-EVFKIEEDFGRARVYNQCGINEFVQQAIESCPVDCIH 211 (338)
Q Consensus 157 ~vDe~~CiGCg~C~~vap-~vF~iddd~G~a~v~~q~g~~e~v~~Av~~CP~~aI~ 211 (338)
|+..+.|++||.|..++| +.+.++++ ...+... .-......++.||++||+
T Consensus 2 ~vi~e~C~~Cg~C~~~Cp~~ai~~~~~--~~~i~~~--~C~~Cg~C~~~CP~~AI~ 53 (55)
T d2fdna_ 2 YVINEACISCGACEPECPVNAISSGDD--RYVIDAD--TCIDCGACAGVCPVDAPV 53 (55)
T ss_dssp EEECTTCCCCCTTGGGCTTCCEECCSS--SCEECTT--TCCCCCHHHHTCTTCCEE
T ss_pred EEeCcCCCChhhHHHhcCccceEcCCc--eEEECHH--HCCCCCChhcccCCCCcC
Confidence 556678999999999998 44555443 2222111 112233559999999996
No 18
>d1bc6a_ d.58.1.2 (A:) Ferredoxin {Bacillus schlegelii [TaxId: 1484]}
Probab=96.45 E-value=0.0016 Score=47.15 Aligned_cols=52 Identities=29% Similarity=0.505 Sum_probs=34.8
Q ss_pred ccCcccccCC--CCccCCCCcc-ceeccccCceeeccC----CCCHHHHHHHHHhCCCCcEEEecCc
Q 019589 157 FVDEFSCIGC--KNCNNVAPEV-FKIEEDFGRARVYNQ----CGINEFVQQAIESCPVDCIHRTSAQ 216 (338)
Q Consensus 157 ~vDe~~CiGC--g~C~~vap~v-F~iddd~G~a~v~~q----~g~~e~v~~Av~~CP~~aI~~~~~~ 216 (338)
+|+.+.|++| |.|..+||.. +.++++ ...+-.. .|.. +..||++||++....
T Consensus 2 yvv~~~C~~C~~g~C~~~CP~~Ai~~~~~--~~~id~~~C~~Cg~C------~~~CP~~AI~~~~~~ 60 (77)
T d1bc6a_ 2 YVITEPCIGTKDASCVEVCPVDCIHEGED--QYYIDPDVCIDCGAC------EAVCPVSAIYHEDFV 60 (77)
T ss_dssp EECCSTTTTCCCCSSTTTCTTCCEEECSS--SEEECTTTCCSCCSH------HHHSGGGSSEETTTS
T ss_pred EEcCccCCCccCcchhhhCCCCCeeccCC--EEEEChhHCcCcCcc------chhCCccccCCCccC
Confidence 5667889999 7899999843 545442 3332222 3444 999999999886543
No 19
>d1jnrb_ d.58.1.5 (B:) Adenylylsulfate reductase B subunit {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=96.43 E-value=0.00056 Score=55.85 Aligned_cols=59 Identities=20% Similarity=0.454 Sum_probs=41.6
Q ss_pred cccCcccccCCCC-----ccCCCC-ccceeccccCceeeccCCCCHHHHHHHHHhCCCCcEEEecC
Q 019589 156 VFVDEFSCIGCKN-----CNNVAP-EVFKIEEDFGRARVYNQCGINEFVQQAIESCPVDCIHRTSA 215 (338)
Q Consensus 156 v~vDe~~CiGCg~-----C~~vap-~vF~iddd~G~a~v~~q~g~~e~v~~Av~~CP~~aI~~~~~ 215 (338)
.+||.+.|+|||. |+.+|| +.+.++++.+++..+.. ...-....++..||++||.+...
T Consensus 2 ~~id~~~C~gCg~c~~~~C~~~CP~~ai~~~~~~~~~~~~d~-~~C~~C~~C~~~CP~~Ai~~~~~ 66 (149)
T d1jnrb_ 2 SFVNPEKCDGCKALERTACEYICPNDLMTLDKEKMKAYNREP-DMCWECYSCVKMCPQGAIDVRGY 66 (149)
T ss_dssp EEECTTTCCSCCSSSSCHHHHHCTTSCEEEETTTTEEEESCG-GGCCCCCHHHHHCTTCCEEECCC
T ss_pred CEEcchhCCCCCCCCcchHHHhCCcccEEecCCCcEEEEecc-ccCCCCccccCcCchheeeeccc
Confidence 3689999999995 888898 55777777565555542 11112335699999999998754
No 20
>d1gtea5 d.58.1.5 (A:845-1017) Dihydropyrimidine dehydrogenase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=96.39 E-value=9.9e-05 Score=62.17 Aligned_cols=62 Identities=23% Similarity=0.401 Sum_probs=39.4
Q ss_pred ccccCcccccCCCCccCCCCcc-c-eeccccCceeeccCCCCHHHHHHHHHhCCC-CcEEEecCcc
Q 019589 155 HVFVDEFSCIGCKNCNNVAPEV-F-KIEEDFGRARVYNQCGINEFVQQAIESCPV-DCIHRTSAQQ 217 (338)
Q Consensus 155 ~v~vDe~~CiGCg~C~~vap~v-F-~iddd~G~a~v~~q~g~~e~v~~Av~~CP~-~aI~~~~~~~ 217 (338)
..++|++.|++|+.|+.+||.. + .+..+.+....+.. +....+-.+++.||+ +||.+++...
T Consensus 101 va~id~~~Ci~C~~C~~~Cp~~ai~~i~~~~~~~~~v~~-~~C~gCg~C~~vCP~~~aI~mv~~~~ 165 (173)
T d1gtea5 101 VAVIDEEMCINCGKCYMTCNDSGYQAIQFDPETHLPTVT-DTCTGCTLCLSVCPIIDCIRMVSRTT 165 (173)
T ss_dssp EEEECTTTCCCCCHHHHHHHHHSCSCEEECTTTCCEEEC-TTCCCCCHHHHHCSSTTTEEEEECCS
T ss_pred EEEEEchhCCCchHHHHhhhhCCEEEEEecCCCceEech-hhCCCcChhHhhCCCCCcEEEEeCCC
Confidence 3468999999999999999833 2 23333222222222 122233356999996 8999987643
No 21
>d1blua_ d.58.1.1 (A:) Ferredoxin II {Chromatium vinosum [TaxId: 1049]}
Probab=96.37 E-value=0.0022 Score=46.77 Aligned_cols=72 Identities=21% Similarity=0.414 Sum_probs=40.2
Q ss_pred ccCcccccCCCCccCCCCc-cceeccccCceeeccC--CCCHH--HHHHHHHhCCCCcEEEecCcchhhhHHHHHHHHHH
Q 019589 157 FVDEFSCIGCKNCNNVAPE-VFKIEEDFGRARVYNQ--CGINE--FVQQAIESCPVDCIHRTSAQQLSLLEDEMRRVERV 231 (338)
Q Consensus 157 ~vDe~~CiGCg~C~~vap~-vF~iddd~G~a~v~~q--~g~~e--~v~~Av~~CP~~aI~~~~~~~~~~Le~~~~~~~~~ 231 (338)
.++.+.|++||.|..+||. .+.+++ +...+... .+=.. ..=..+..||++||.+...... ..+.++.+..++
T Consensus 2 ~iitd~Ci~Cg~C~~~CP~~AI~~~~--~~~~id~~~C~~C~~~~~~G~C~~vCP~~AI~~~~~~~e-~~~~l~~k~~~l 78 (80)
T d1blua_ 2 LMITDECINCDVCEPECPNGAISQGD--ETYVIEPSLCTECVGHYETSQCVEVCPVDCIIKDPSHEE-TEDELRAKYERI 78 (80)
T ss_dssp EEECTTCCCCCTTGGGCTTCCEEECS--SSEEECGGGCCTTTTTCSSCHHHHHCTTCCEEECTTSCC-CHHHHHHHHHHH
T ss_pred EEeCcCCCChHHHHHHChhcchhhcC--cceEEccccccCCCCCCCCCccccccCCCCccCCCCCcc-CHHHHHHHHHHh
Confidence 3557889999999999993 444433 23333221 00000 0014699999999988643222 234444554443
No 22
>d1h98a_ d.58.1.2 (A:) Ferredoxin {Thermus thermophilus [TaxId: 274]}
Probab=96.29 E-value=0.0012 Score=47.91 Aligned_cols=14 Identities=29% Similarity=0.705 Sum_probs=12.3
Q ss_pred HHhCCCCcEEEecC
Q 019589 202 IESCPVDCIHRTSA 215 (338)
Q Consensus 202 v~~CP~~aI~~~~~ 215 (338)
+..||++||++.+.
T Consensus 46 ~~~CP~~AI~~~~~ 59 (77)
T d1h98a_ 46 VPACPVNAIYPEED 59 (77)
T ss_dssp HHHCTTCCEEEGGG
T ss_pred ccccCcCccCCCcc
Confidence 99999999998654
No 23
>d7fd1a_ d.58.1.2 (A:) Ferredoxin {Azotobacter vinelandii [TaxId: 354]}
Probab=96.14 E-value=0.0014 Score=50.46 Aligned_cols=22 Identities=18% Similarity=0.274 Sum_probs=15.9
Q ss_pred HHhCCCCcEEEecCcchhhhHH
Q 019589 202 IESCPVDCIHRTSAQQLSLLED 223 (338)
Q Consensus 202 v~~CP~~aI~~~~~~~~~~Le~ 223 (338)
+..||++||.+.+.....+..+
T Consensus 46 ~~~CP~~ai~~~~~~~~~~~~~ 67 (106)
T d7fd1a_ 46 EPECPAQAIFSEDEVPEDMQEF 67 (106)
T ss_dssp GGGCTTCCEEEGGGCCGGGTHH
T ss_pred cccCCCCCcccccccchhHHHH
Confidence 9999999999876544444333
No 24
>d1dura_ d.58.1.1 (A:) Ferredoxin II {Peptostreptococcus asaccharolyticus [TaxId: 1258]}
Probab=96.10 E-value=0.0011 Score=44.98 Aligned_cols=53 Identities=19% Similarity=0.300 Sum_probs=32.2
Q ss_pred ccCcccccCCCCccCCCCcc-ceeccccCceeeccCCCCHHHHHHHHHhCCCCcEEEec
Q 019589 157 FVDEFSCIGCKNCNNVAPEV-FKIEEDFGRARVYNQCGINEFVQQAIESCPVDCIHRTS 214 (338)
Q Consensus 157 ~vDe~~CiGCg~C~~vap~v-F~iddd~G~a~v~~q~g~~e~v~~Av~~CP~~aI~~~~ 214 (338)
++..+.|++|+.|..++|.. +.. . +...+... .-...-..+..||++||+.++
T Consensus 2 y~i~d~C~~C~~C~~~CP~~ai~~--~-~~~~i~~~--~C~~Cg~C~~~CP~~AI~~ed 55 (55)
T d1dura_ 2 YVINDSCIACGACKPECPVNCIQE--G-SIYAIDAD--SCIDCGSCASVCPVGAPNPED 55 (55)
T ss_dssp EEECTTCCCCCCSGGGCTTCCEEC--S-SSCEECTT--TCCCCCHHHHHCTTCCEEECC
T ss_pred eEeCccCcChhHHHhhCCcCeEeC--C-ceeEEChh--HCcCCCChhhhCCcCcCCCcC
Confidence 44556899999999999843 332 2 22222222 111222459999999998764
No 25
>d1rgva_ d.58.1.1 (A:) Ferredoxin II {Thauera aromatica [TaxId: 59405]}
Probab=96.03 E-value=0.0044 Score=45.09 Aligned_cols=53 Identities=23% Similarity=0.352 Sum_probs=31.3
Q ss_pred cccccCCCCccCCCCccceeccccCceeeccC-CCCH---HHHHHHHHhCCCCcEEEe
Q 019589 160 EFSCIGCKNCNNVAPEVFKIEEDFGRARVYNQ-CGIN---EFVQQAIESCPVDCIHRT 213 (338)
Q Consensus 160 e~~CiGCg~C~~vap~vF~iddd~G~a~v~~q-~g~~---e~v~~Av~~CP~~aI~~~ 213 (338)
.+.|++||.|..+||..- +..+.+...+... .-.. ...=..+..||++||...
T Consensus 5 td~Ci~Cg~C~~~CP~~A-I~~~~~~~~id~~~C~~C~~~~~~G~C~~vCP~~AI~~~ 61 (80)
T d1rgva_ 5 NDDCTACDACVEECPNEA-ITPGDPIYVIDPTKCSECVGAFDEPQCRLVCPADCIPDN 61 (80)
T ss_dssp CSCCCCCCTTTTTCTTCC-EECCSSSCEECTTTCCTTTTTCSSCHHHHHCSSCCCCBC
T ss_pred cccCcCCcCHHHHHHhCc-cccccccccccCCCCcCCCCcCCCCcchhhccccCeeCC
Confidence 457999999999999442 2222233443222 0000 000146999999999765
No 26
>d2fug91 d.58.1.5 (9:26-179) NADH-quinone oxidoreductase chain 9, Nqo9 {Thermus thermophilus [TaxId: 274]}
Probab=95.60 E-value=0.0017 Score=53.02 Aligned_cols=31 Identities=26% Similarity=0.555 Sum_probs=26.0
Q ss_pred ccCcccccCCCCccCCCCccceeccccCceeeccCCCCHHHHHHHHHhCCCCcEEEecCcchh
Q 019589 157 FVDEFSCIGCKNCNNVAPEVFKIEEDFGRARVYNQCGINEFVQQAIESCPVDCIHRTSAQQLS 219 (338)
Q Consensus 157 ~vDe~~CiGCg~C~~vap~vF~iddd~G~a~v~~q~g~~e~v~~Av~~CP~~aI~~~~~~~~~ 219 (338)
.+|...|++||.| ++.||++||.+...-+++
T Consensus 67 ~id~~~C~~CG~C--------------------------------ve~CPt~AI~~~~~~e~~ 97 (154)
T d2fug91 67 EINMLRCIFCGLC--------------------------------EEACPTGAIVLGYDFEMA 97 (154)
T ss_dssp EEETTTCCCCTHH--------------------------------HHHCSSSCEEECSCCCCC
T ss_pred EeccccCCCCCCc--------------------------------hhhCCCCeEeccCccccc
Confidence 4788899999999 999999999998654443
No 27
>d1vlfn2 d.58.1.5 (N:1-195) Transhydroxylase beta subunit, BthL, N-terminal domain {Pelobacter acidigallici [TaxId: 35816]}
Probab=95.36 E-value=0.0043 Score=52.61 Aligned_cols=61 Identities=16% Similarity=0.216 Sum_probs=42.2
Q ss_pred CCccccCcccccCCCCccCCCC-ccceeccccCceeeccCCCCH-H---------HHHHHHHhCCCCcEEEecCc
Q 019589 153 KDHVFVDEFSCIGCKNCNNVAP-EVFKIEEDFGRARVYNQCGIN-E---------FVQQAIESCPVDCIHRTSAQ 216 (338)
Q Consensus 153 ~~~v~vDe~~CiGCg~C~~vap-~vF~iddd~G~a~v~~q~g~~-e---------~v~~Av~~CP~~aI~~~~~~ 216 (338)
...|.+|++.||||+.|...|| +.-.++.+.|.+. ..... + ..=..+++||++||...+.+
T Consensus 89 ~G~V~id~~kCiGC~~C~~aCPy~a~~~~~~~~~~~---KC~~C~~r~~~~~~~g~~PaCv~~Cp~~a~~f~~~~ 160 (195)
T d1vlfn2 89 DGIVLIDPEKAKGKKELLDTCPYGVMYWNEEENVAQ---KCTMCAHLLDDESWAPKMPRCAHNCGSFVYEFLKTT 160 (195)
T ss_dssp TSCEEECTTTTTTCGGGGGGCSSCCCEEETTTTEEE---CCCTTHHHHTCTTCTTCSCHHHHHCSSCCEEEEEEC
T ss_pred ccceeeehhhccccchhhcCCCCCCeEcccccCCcc---ccCcchhhhhccccccchhhhhhhCcHhheecCCCC
Confidence 3578899999999999999999 5555665545432 21111 1 11257999999999986543
No 28
>d1kqfb1 d.58.1.5 (B:2-245) Formate dehydrogenase N, iron-sulfur (beta) subunit {Escherichia coli [TaxId: 562]}
Probab=95.11 E-value=0.003 Score=55.61 Aligned_cols=62 Identities=23% Similarity=0.545 Sum_probs=42.4
Q ss_pred CCccccCcccccCCCCccCCCC-ccceeccccCceeeccCCCCH-HHHH-----HHHHhCCCCcEEEecCcc
Q 019589 153 KDHVFVDEFSCIGCKNCNNVAP-EVFKIEEDFGRARVYNQCGIN-EFVQ-----QAIESCPVDCIHRTSAQQ 217 (338)
Q Consensus 153 ~~~v~vDe~~CiGCg~C~~vap-~vF~iddd~G~a~v~~q~g~~-e~v~-----~Av~~CP~~aI~~~~~~~ 217 (338)
...|.+|++.||||+.|...|| +.-.++.+.|.+. ..... +.+. .+|++||++||.+.+..+
T Consensus 122 ~G~V~id~~~CiGC~~C~~ACPyga~~~~~~~~~~~---KC~~C~~r~~~G~~PaCv~~CP~~Al~fG~~~e 190 (244)
T d1kqfb1 122 NGIVDFQSENCIGCGYCIAGCPFNIPRLNKEDNRVY---KCTLCVDRVSVGQEPACVKTCPTGAIHFGTKKE 190 (244)
T ss_dssp TSCEEECGGGCCCCCHHHHHCTTCCCEEETTTTEEE---CCCTTHHHHTTTCCCHHHHHCTTSCEEEEEHHH
T ss_pred CCcEEEccccccchhhHhhcCCCCCcEeccccCcce---ecccchhhhcCCCCcchHHhcccCCEEEecHHH
Confidence 3578899999999999999999 4445555545432 21111 1111 479999999999876533
No 29
>d3c7bb1 d.58.1.5 (B:197-261) DsrB insert domain {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=94.45 E-value=0.0043 Score=43.44 Aligned_cols=16 Identities=38% Similarity=0.793 Sum_probs=13.6
Q ss_pred CccccCcccccCCCCc
Q 019589 154 DHVFVDEFSCIGCKNC 169 (338)
Q Consensus 154 ~~v~vDe~~CiGCg~C 169 (338)
..+.+|.+.|+|||.|
T Consensus 36 g~v~id~~~CigCg~C 51 (65)
T d3c7bb1 36 KTIKVDVEKCMYCGNC 51 (65)
T ss_dssp TEEEECTTTCCCCCHH
T ss_pred CcEEEeCCcCcccChh
Confidence 3567899999999999
No 30
>d2fug34 d.58.1.5 (3:96-246) NADH-quinone oxidoreductase chain 3, Nqo3, domain 2 {Thermus thermophilus [TaxId: 274]}
Probab=94.27 E-value=0.0015 Score=53.49 Aligned_cols=58 Identities=24% Similarity=0.339 Sum_probs=38.2
Q ss_pred CccccCcccccCCCCccCCCCc-----cceeccccCceeeccCCC--CHHHHHHHHHhCCCCcEE
Q 019589 154 DHVFVDEFSCIGCKNCNNVAPE-----VFKIEEDFGRARVYNQCG--INEFVQQAIESCPVDCIH 211 (338)
Q Consensus 154 ~~v~vDe~~CiGCg~C~~vap~-----vF~iddd~G~a~v~~q~g--~~e~v~~Av~~CP~~aI~ 211 (338)
..+..|...||.|+.|+.+|.+ ++.+........+..... +....-++++.|||.||.
T Consensus 77 p~i~~d~~kCI~C~rCvr~C~ev~g~~~l~~~~rG~~~~i~~~~~~~~c~~cG~Cv~vCPtGAL~ 141 (151)
T d2fug34 77 PFVILDRERCIHCKRCVRYFEEVPGDEVLDFIERGVHTFIGTMDFGLPSGFSGNITDICPVGALL 141 (151)
T ss_dssp SSSCEECSCCCCCCHHHHHHHHTTCCCCCCCBSCGGGCBCCCSSTTCCSSCCTHHHHHCSSSSSB
T ss_pred CeEEecCCCCCcCchHHhhhhhccCCceEEEeccccceEEccCCCCCCChhhcCHHhcCcccccc
Confidence 3577899999999999998853 355555433333322111 122344689999999995
No 31
>d1jb0c_ d.58.1.2 (C:) Photosystem I iron-sulfur protein PsaC {Synechococcus elongatus [TaxId: 32046]}
Probab=93.94 E-value=0.0057 Score=44.20 Aligned_cols=59 Identities=19% Similarity=0.275 Sum_probs=33.7
Q ss_pred cccCcccccCCCCccCCCCc-cceeccccCc---eee-ccCCCCHHHHHHHHHhCCCCcEEEec
Q 019589 156 VFVDEFSCIGCKNCNNVAPE-VFKIEEDFGR---ARV-YNQCGINEFVQQAIESCPVDCIHRTS 214 (338)
Q Consensus 156 v~vDe~~CiGCg~C~~vap~-vF~iddd~G~---a~v-~~q~g~~e~v~~Av~~CP~~aI~~~~ 214 (338)
++.+.+.|++|+.|+.+||. ...+..+++. ... +...+..-.....++.||++||.+..
T Consensus 3 ~v~~~d~Ci~Cg~Cv~~Cp~~~i~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~~CP~~Ai~~~~ 66 (80)
T d1jb0c_ 3 TVKIYDTCIGCTQCVRACPTDVLEMVPWDGCKAGQIASSPRTEDCVGCKRCETACPTDFLSIRV 66 (80)
T ss_dssp EEEEETTCCCCCHHHHHCTTCCCEEEECSSSTTSEEEECTTGGGCCCCCHHHHHCCSSSCSEEE
T ss_pred ccccCCCCcCccCHHHhCCccceEeeccccccccccceecchhhCcCCCCccccCCCCCceeEe
Confidence 34556789999999999983 3444332211 111 11111111233569999999998753
No 32
>d2c42a5 d.58.1.5 (A:669-785) Pyruvate-ferredoxin oxidoreductase, PFOR, domain V {Desulfovibrio africanus [TaxId: 873]}
Probab=92.81 E-value=0.02 Score=44.09 Aligned_cols=29 Identities=24% Similarity=0.825 Sum_probs=23.9
Q ss_pred ccccCcccccCCCCccCCCCccceeccccCceeeccCCCCHHHHHHHHHhCCCC--cEEEecC
Q 019589 155 HVFVDEFSCIGCKNCNNVAPEVFKIEEDFGRARVYNQCGINEFVQQAIESCPVD--CIHRTSA 215 (338)
Q Consensus 155 ~v~vDe~~CiGCg~C~~vap~vF~iddd~G~a~v~~q~g~~e~v~~Av~~CP~~--aI~~~~~ 215 (338)
.+.++.+.|+|||.| ++.||+. ||.+...
T Consensus 69 ~~~i~~~~C~~CG~C--------------------------------~~~CP~~~~ai~m~~~ 99 (117)
T d2c42a5 69 RIQINTLDCMGCGNC--------------------------------ADICPPKEKALVMQPL 99 (117)
T ss_dssp EEEECTTTCCCCCHH--------------------------------HHHCSSSSCSEEEEEG
T ss_pred eeeeccccCCccCch--------------------------------hhhcCCCcCccccccc
Confidence 345788899999999 9999986 8887654
No 33
>d1jb0c_ d.58.1.2 (C:) Photosystem I iron-sulfur protein PsaC {Synechococcus elongatus [TaxId: 32046]}
Probab=92.65 E-value=0.016 Score=41.62 Aligned_cols=16 Identities=25% Similarity=0.623 Sum_probs=13.2
Q ss_pred HHHHhCCCCcEEEecC
Q 019589 200 QAIESCPVDCIHRTSA 215 (338)
Q Consensus 200 ~Av~~CP~~aI~~~~~ 215 (338)
..+..||+++|.+...
T Consensus 15 ~Cv~~Cp~~~i~~~~~ 30 (80)
T d1jb0c_ 15 QCVRACPTDVLEMVPW 30 (80)
T ss_dssp HHHHHCTTCCCEEEEC
T ss_pred CHHHhCCccceEeecc
Confidence 4689999999998754
No 34
>d1dura_ d.58.1.1 (A:) Ferredoxin II {Peptostreptococcus asaccharolyticus [TaxId: 1258]}
Probab=92.44 E-value=0.021 Score=38.18 Aligned_cols=17 Identities=47% Similarity=1.097 Sum_probs=9.0
Q ss_pred cCcccccCCCCccCCCC
Q 019589 158 VDEFSCIGCKNCNNVAP 174 (338)
Q Consensus 158 vDe~~CiGCg~C~~vap 174 (338)
++...|++||.|..++|
T Consensus 31 i~~~~C~~Cg~C~~~CP 47 (55)
T d1dura_ 31 IDADSCIDCGSCASVCP 47 (55)
T ss_dssp ECTTTCCCCCHHHHHCT
T ss_pred EChhHCcCCCChhhhCC
Confidence 34455555555555554
No 35
>d1y5ib1 d.58.1.5 (B:1-509) Respiratory nitrate reductase 1 beta chain {Escherichia coli [TaxId: 562]}
Probab=92.28 E-value=0.017 Score=55.82 Aligned_cols=59 Identities=17% Similarity=0.251 Sum_probs=39.1
Q ss_pred CccccCcccccCCCCccCCCC-ccceeccccCceeeccCCCCHHHHH-----HHHHhCCCCcEEEec
Q 019589 154 DHVFVDEFSCIGCKNCNNVAP-EVFKIEEDFGRARVYNQCGINEFVQ-----QAIESCPVDCIHRTS 214 (338)
Q Consensus 154 ~~v~vDe~~CiGCg~C~~vap-~vF~iddd~G~a~v~~q~g~~e~v~-----~Av~~CP~~aI~~~~ 214 (338)
..|.+|...|+||+.|+..|| +.-.++...|.+.--.-. .+.+. .++.+||+.||..-+
T Consensus 208 G~v~id~~~CigC~~C~~aCPy~~~~~~~~~~~~~KC~~C--~~r~~~G~~paCv~~Cp~~A~~~g~ 272 (509)
T d1y5ib1 208 GIVLIDQDKCRGWRMCITGCPYKKIYFNWKSGKSEKCIFC--YPRIEAGQPTVCSETCVGRIRYLGV 272 (509)
T ss_dssp CCEEECTTTCCCCCCHHHHCTTCCEEEETTTTEEEECCTT--HHHHTTTCCCHHHHTCTTCCEEEEE
T ss_pred CcEEEchhhccchHHHHhhCCCCCeEecCCCCceeecccc--hhHHhcCCCChhhhhCcHhhhhhch
Confidence 467899999999999999999 334455554544321111 11111 379999999998653
No 36
>d1h98a_ d.58.1.2 (A:) Ferredoxin {Thermus thermophilus [TaxId: 274]}
Probab=91.71 E-value=0.028 Score=40.30 Aligned_cols=24 Identities=33% Similarity=0.682 Sum_probs=17.2
Q ss_pred HHhCCCCcEEEecCcchhhhHHHHH
Q 019589 202 IESCPVDCIHRTSAQQLSLLEDEMR 226 (338)
Q Consensus 202 v~~CP~~aI~~~~~~~~~~Le~~~~ 226 (338)
+..||++||++.+. .+.+.++.|.
T Consensus 17 ~~~CP~~AI~~~~~-~~~id~~~Ci 40 (77)
T d1h98a_ 17 VEVCPVECIYDGGD-QFYIHPEECI 40 (77)
T ss_dssp HHHCTTCCEEECSS-SEEECTTTCC
T ss_pred HHHCCCCceEccCc-EEEEcHHHCC
Confidence 99999999997654 4455555444
No 37
>d2fug91 d.58.1.5 (9:26-179) NADH-quinone oxidoreductase chain 9, Nqo9 {Thermus thermophilus [TaxId: 274]}
Probab=91.61 E-value=0.041 Score=44.34 Aligned_cols=24 Identities=33% Similarity=0.736 Sum_probs=20.5
Q ss_pred CcccccCCCCccCCCCccceeccccCceeeccCCCCHHHHHHHHHhCCCCcEEEec
Q 019589 159 DEFSCIGCKNCNNVAPEVFKIEEDFGRARVYNQCGINEFVQQAIESCPVDCIHRTS 214 (338)
Q Consensus 159 De~~CiGCg~C~~vap~vF~iddd~G~a~v~~q~g~~e~v~~Av~~CP~~aI~~~~ 214 (338)
+.+.||+|+.| +..||++||.+..
T Consensus 24 ~~ekCI~C~~C--------------------------------~~~CP~~~i~~~~ 47 (154)
T d2fug91 24 GLEKCIGCSLC--------------------------------AAACPAYAIYVEP 47 (154)
T ss_dssp SCBSCCCCTHH--------------------------------HHHCSSCCEEEEE
T ss_pred CcccCcCCCcH--------------------------------HhhcCCcceeccc
Confidence 56799999999 8999999988753
No 38
>d2c42a5 d.58.1.5 (A:669-785) Pyruvate-ferredoxin oxidoreductase, PFOR, domain V {Desulfovibrio africanus [TaxId: 873]}
Probab=91.30 E-value=0.036 Score=42.53 Aligned_cols=14 Identities=29% Similarity=0.610 Sum_probs=12.1
Q ss_pred cccCcccccCCCCc
Q 019589 156 VFVDEFSCIGCKNC 169 (338)
Q Consensus 156 v~vDe~~CiGCg~C 169 (338)
-.+|.+.||+||.|
T Consensus 14 pv~d~~~Ci~Cg~C 27 (117)
T d2c42a5 14 PQWVPENCIQCNQC 27 (117)
T ss_dssp EEECTTTCCCCCHH
T ss_pred CEeCchhcCCCcCh
Confidence 35688999999999
No 39
>d7fd1a_ d.58.1.2 (A:) Ferredoxin {Azotobacter vinelandii [TaxId: 354]}
Probab=91.07 E-value=0.037 Score=42.13 Aligned_cols=37 Identities=41% Similarity=0.828 Sum_probs=27.4
Q ss_pred ccCcccccCC--CCccCCCCccceeccccCceeeccCCCCHHHHHHHHHhCCCCcEEEecCcchhhhHHHHH
Q 019589 157 FVDEFSCIGC--KNCNNVAPEVFKIEEDFGRARVYNQCGINEFVQQAIESCPVDCIHRTSAQQLSLLEDEMR 226 (338)
Q Consensus 157 ~vDe~~CiGC--g~C~~vap~vF~iddd~G~a~v~~q~g~~e~v~~Av~~CP~~aI~~~~~~~~~~Le~~~~ 226 (338)
++..+.|++| |.| +..||++||...+. .+.+-.+.|.
T Consensus 2 yvi~~~C~~C~~~~C--------------------------------~~~CP~~ai~~~~~-~~~id~~~Ci 40 (106)
T d7fd1a_ 2 FVVTDNCIKCKYTDC--------------------------------VEVCPVDCFYEGPN-FLVIHPDECI 40 (106)
T ss_dssp EEECGGGTTTCCCHH--------------------------------HHHCTTCCEEECSS-CEEECTTTCC
T ss_pred EEcCccCCCCCCCcc--------------------------------ccccCCCcccccCC-EEEEchHHCC
Confidence 5667899999 689 99999999998654 3444444444
No 40
>d1h0hb_ d.58.1.5 (B:) Tungsten containing formate dehydrogenase, small subunit {Desulfovibrio gigas [TaxId: 879]}
Probab=82.96 E-value=0.1 Score=44.38 Aligned_cols=52 Identities=12% Similarity=0.276 Sum_probs=34.0
Q ss_pred ccccCCCCccCCCC-ccceeccccCceeeccCCCCH-HHHH-----HHHHhCCCCcEEEecC
Q 019589 161 FSCIGCKNCNNVAP-EVFKIEEDFGRARVYNQCGIN-EFVQ-----QAIESCPVDCIHRTSA 215 (338)
Q Consensus 161 ~~CiGCg~C~~vap-~vF~iddd~G~a~v~~q~g~~-e~v~-----~Av~~CP~~aI~~~~~ 215 (338)
..|+||+.|+..|| ++-.++.+.|.+. ..... +.+. .+|++||+.||...+.
T Consensus 108 ~~c~gc~~C~~aCPy~~~~~~~~~~~~~---KCd~C~~R~~~G~~PaCV~~CP~~Al~fGd~ 166 (214)
T d1h0hb_ 108 KDLEDYESVISACPYDVPRKVAESNQMA---KCDMCIDRITNGLRPACVTSCPTGAMNFGDL 166 (214)
T ss_dssp GGCSCHHHHHHHCTTCCCEECTTSSCEE---CCCTTHHHHTTTCCCHHHHHCSSSCEEEEEH
T ss_pred ccccCcceecccCCCCCceecccCCccE---eCcccHHHHhCCCCCCceeecccCCEEEeeh
Confidence 47999999999998 4445555555433 22211 1221 4799999999988654
No 41
>d1bc6a_ d.58.1.2 (A:) Ferredoxin {Bacillus schlegelii [TaxId: 1484]}
Probab=75.10 E-value=0.26 Score=34.85 Aligned_cols=23 Identities=35% Similarity=0.842 Sum_probs=19.5
Q ss_pred CccccCcccccCCCCccCCCCcc
Q 019589 154 DHVFVDEFSCIGCKNCNNVAPEV 176 (338)
Q Consensus 154 ~~v~vDe~~CiGCg~C~~vap~v 176 (338)
..+.+|...|+|||.|..+||..
T Consensus 30 ~~~~id~~~C~~Cg~C~~~CP~~ 52 (77)
T d1bc6a_ 30 DQYYIDPDVCIDCGACEAVCPVS 52 (77)
T ss_dssp SSEEECTTTCCSCCSHHHHSGGG
T ss_pred CEEEEChhHCcCcCccchhCCcc
Confidence 34678999999999999999943
No 42
>d1hfel2 d.58.1.5 (L:2-86) Fe-only hydrogenase larger subunit, N-domain {Desulfovibrio desulfuricans [TaxId: 876]}
Probab=72.37 E-value=0.84 Score=32.54 Aligned_cols=23 Identities=30% Similarity=0.608 Sum_probs=19.2
Q ss_pred CccccCcccccCCCCccCCCCcc
Q 019589 154 DHVFVDEFSCIGCKNCNNVAPEV 176 (338)
Q Consensus 154 ~~v~vDe~~CiGCg~C~~vap~v 176 (338)
..+.++.+.|++||.|+.+||..
T Consensus 56 ~~~~~~~~~C~~Cg~C~~~CP~~ 78 (85)
T d1hfel2 56 PHSIPHIEACINCGQCLTHCPEN 78 (85)
T ss_dssp CCBCCCGGGCCCCCTTGGGCTTC
T ss_pred ceEeCChhHCCCcChhhhhCCcc
Confidence 35567889999999999999964
No 43
>d2v4jb1 d.58.1.5 (B:209-277) DsrB insert domain {Desulfovibrio vulgaris [TaxId: 881]}
Probab=68.10 E-value=0.38 Score=33.44 Aligned_cols=23 Identities=22% Similarity=0.716 Sum_probs=19.2
Q ss_pred CccccCcccccCCCCccCCCCcc
Q 019589 154 DHVFVDEFSCIGCKNCNNVAPEV 176 (338)
Q Consensus 154 ~~v~vDe~~CiGCg~C~~vap~v 176 (338)
..|.|+++.|..||+|+..||..
T Consensus 41 ksV~V~~eRCMyCGNCYT~cp~~ 63 (69)
T d2v4jb1 41 NTIAIKNERCMYCGNCYTMCPAL 63 (69)
T ss_dssp EEEEECGGGCCCCCHHHHHCTTC
T ss_pred ceEEEcCCcceecCCccccCCCc
Confidence 46778999999999998887754
No 44
>d2fdna_ d.58.1.1 (A:) Ferredoxin II {Clostridium acidurici [TaxId: 1556]}
Probab=65.97 E-value=0.66 Score=30.31 Aligned_cols=22 Identities=32% Similarity=0.733 Sum_probs=18.7
Q ss_pred ccccCcccccCCCCccCCCCcc
Q 019589 155 HVFVDEFSCIGCKNCNNVAPEV 176 (338)
Q Consensus 155 ~v~vDe~~CiGCg~C~~vap~v 176 (338)
...+|.+.|++||.|..++|..
T Consensus 29 ~~~i~~~~C~~Cg~C~~~CP~~ 50 (55)
T d2fdna_ 29 RYVIDADTCIDCGACAGVCPVD 50 (55)
T ss_dssp SCEECTTTCCCCCHHHHTCTTC
T ss_pred eEEECHHHCCCCCChhcccCCC
Confidence 4567899999999999999853
No 45
>d2v4ja1 d.58.1.5 (A:242-322) DsrA insert domain {Desulfovibrio vulgaris [TaxId: 881]}
Probab=63.98 E-value=0.38 Score=34.53 Aligned_cols=37 Identities=22% Similarity=0.479 Sum_probs=26.2
Q ss_pred HHHHHHhCCCCcEEEecCcchhhhHHHHHH-HHHHHHhc
Q 019589 198 VQQAIESCPVDCIHRTSAQQLSLLEDEMRR-VERVAMML 235 (338)
Q Consensus 198 v~~Av~~CP~~aI~~~~~~~~~~Le~~~~~-~~~~~~~~ 235 (338)
..+-++.||+.||+|. ...|++=...|++ |-+|.+|+
T Consensus 36 ~~eVv~~CPT~cm~~d-~~~L~Idn~~C~RCMHCINvMP 73 (81)
T d2v4ja1 36 EAEVVNRCPSKCMKWD-GSKLSIDNKECVRCMHCINTMP 73 (81)
T ss_dssp HHHTGGGCTTCCEEEC-SSCEEECGGGCCCCSHHHHHCT
T ss_pred hhchhccCCHhhcccc-CCeeEEeCcccccCcCchhhCc
Confidence 3445899999999996 4567777667765 55665554
No 46
>d1gtea5 d.58.1.5 (A:845-1017) Dihydropyrimidine dehydrogenase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=60.26 E-value=0.75 Score=37.37 Aligned_cols=27 Identities=26% Similarity=0.576 Sum_probs=20.8
Q ss_pred CccccCcccccCCCCccCCCCc--cceec
Q 019589 154 DHVFVDEFSCIGCKNCNNVAPE--VFKIE 180 (338)
Q Consensus 154 ~~v~vDe~~CiGCg~C~~vap~--vF~id 180 (338)
..+.++.+.|+|||.|..+||. -..|.
T Consensus 133 ~~~~v~~~~C~gCg~C~~vCP~~~aI~mv 161 (173)
T d1gtea5 133 THLPTVTDTCTGCTLCLSVCPIIDCIRMV 161 (173)
T ss_dssp TCCEEECTTCCCCCHHHHHCSSTTTEEEE
T ss_pred CceEechhhCCCcChhHhhCCCCCcEEEE
Confidence 3456788999999999999993 34443
No 47
>d3c7ba1 d.58.1.5 (A:239-304) DsrA insert domain {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=52.21 E-value=2.3 Score=29.09 Aligned_cols=34 Identities=21% Similarity=0.453 Sum_probs=22.9
Q ss_pred HHHHhCCCCcEEEecCcchhhhHHHHHH-HHHHHHh
Q 019589 200 QAIESCPVDCIHRTSAQQLSLLEDEMRR-VERVAMM 234 (338)
Q Consensus 200 ~Av~~CP~~aI~~~~~~~~~~Le~~~~~-~~~~~~~ 234 (338)
+-++.||+.||+|.. ..|++=...|.+ |-+|..|
T Consensus 23 eVv~~CPT~cm~~dg-~~L~Idn~~CvRCMHCIN~M 57 (66)
T d3c7ba1 23 EVVKLCPTGAIKWDG-KELTIDNRECVRCMHCINKM 57 (66)
T ss_dssp HTGGGCTTCCEEECS-SCEEECTTTCCCCCHHHHHC
T ss_pred hhhccCccccccccC-CEEEEcCcccCccccchhcC
Confidence 348999999999964 467665555543 4455444
No 48
>d1xera_ d.58.1.3 (A:) Ferredoxin {Archaeon Sulfolobus sp. [TaxId: 2288]}
Probab=51.69 E-value=1.2 Score=32.81 Aligned_cols=22 Identities=41% Similarity=0.653 Sum_probs=18.7
Q ss_pred ccccCcccccCCCCccCCCCcc
Q 019589 155 HVFVDEFSCIGCKNCNNVAPEV 176 (338)
Q Consensus 155 ~v~vDe~~CiGCg~C~~vap~v 176 (338)
...+++..|++||.|+.+||..
T Consensus 75 ~~~i~~~~C~~Cg~C~~~CP~~ 96 (103)
T d1xera_ 75 ADPVNEQACIFCMACVNVCPVA 96 (103)
T ss_dssp EECTTGGGCCCCCHHHHHCTTC
T ss_pred eeEeccccCCCcChHHhhcCcc
Confidence 4567889999999999999943
No 49
>d3c8ya3 d.58.1.5 (A:127-209) Fe-only hydrogenase, second domain {Clostridium pasteurianum [TaxId: 1501]}
Probab=47.76 E-value=1.4 Score=30.77 Aligned_cols=21 Identities=24% Similarity=0.588 Sum_probs=17.1
Q ss_pred cccCcccccCCCCccCCCCcc
Q 019589 156 VFVDEFSCIGCKNCNNVAPEV 176 (338)
Q Consensus 156 v~vDe~~CiGCg~C~~vap~v 176 (338)
..+++..|++||.|+.+||-.
T Consensus 57 ~~~~~~~C~~Cg~Cv~vCP~g 77 (83)
T d3c8ya3 57 KCFDDTNCLLCGQCIIACPVA 77 (83)
T ss_dssp CCGGGSSCCCCCHHHHHCSST
T ss_pred ccccccccccCCHHHhhCCCC
Confidence 346777899999999999843
No 50
>d1kqfb1 d.58.1.5 (B:2-245) Formate dehydrogenase N, iron-sulfur (beta) subunit {Escherichia coli [TaxId: 562]}
Probab=43.86 E-value=4.4 Score=34.38 Aligned_cols=55 Identities=16% Similarity=0.283 Sum_probs=36.8
Q ss_pred cccccCCCC--ccCCCCc-cceeccccCceeeccCCCCHHHHHHHHHhCCCCcEEEecCc
Q 019589 160 EFSCIGCKN--CNNVAPE-VFKIEEDFGRARVYNQCGINEFVQQAIESCPVDCIHRTSAQ 216 (338)
Q Consensus 160 e~~CiGCg~--C~~vap~-vF~iddd~G~a~v~~q~g~~e~v~~Av~~CP~~aI~~~~~~ 216 (338)
...|..|.+ |+.+||. -...+++.|.+.+-.. ..-....++..||.++|.+....
T Consensus 96 ~~~C~HC~~p~Cv~vCPt~Aa~~~~e~G~V~id~~--~CiGC~~C~~ACPyga~~~~~~~ 153 (244)
T d1kqfb1 96 KDGCMHCEDPGCLKACPSAGAIIQYANGIVDFQSE--NCIGCGYCIAGCPFNIPRLNKED 153 (244)
T ss_dssp EESCCCBSSCHHHHHCCSTTSEEEETTSCEEECGG--GCCCCCHHHHHCTTCCCEEETTT
T ss_pred chhhccccCCcccccccccceeEEcCCCcEEEccc--cccchhhHhhcCCCCCcEecccc
Confidence 456999998 9999994 4555555576655433 01113356999999999987543
No 51
>d1jnrb_ d.58.1.5 (B:) Adenylylsulfate reductase B subunit {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=43.51 E-value=1.8 Score=33.83 Aligned_cols=24 Identities=17% Similarity=0.459 Sum_probs=19.0
Q ss_pred cccCcccccCCCCccCCCC-cccee
Q 019589 156 VFVDEFSCIGCKNCNNVAP-EVFKI 179 (338)
Q Consensus 156 v~vDe~~CiGCg~C~~vap-~vF~i 179 (338)
+.+|...|++|+.|..+|| +...+
T Consensus 39 ~~~d~~~C~~C~~C~~~CP~~Ai~~ 63 (149)
T d1jnrb_ 39 YNREPDMCWECYSCVKMCPQGAIDV 63 (149)
T ss_dssp EESCGGGCCCCCHHHHHCTTCCEEE
T ss_pred EEeccccCCCCccccCcCchheeee
Confidence 4578899999999999998 33444
No 52
>d1nekb1 a.1.2.1 (B:107-238) Succinate dehydogenase {Escherichia coli [TaxId: 562]}
Probab=41.27 E-value=2.2 Score=32.50 Aligned_cols=18 Identities=28% Similarity=0.802 Sum_probs=14.8
Q ss_pred CcccccCCCCccCCCCcc
Q 019589 159 DEFSCIGCKNCNNVAPEV 176 (338)
Q Consensus 159 De~~CiGCg~C~~vap~v 176 (338)
+...||.||.|..+||..
T Consensus 39 ~~~~CI~CG~C~~~CP~~ 56 (132)
T d1nekb1 39 GLYECILCACCSTSCPSF 56 (132)
T ss_dssp TTSCCCCCCHHHHTCHHH
T ss_pred hhHHHhHhhhhhhhCccc
Confidence 346799999999999854
No 53
>d2gmha3 d.58.1.6 (A:483-584) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]}
Probab=36.69 E-value=8.3 Score=28.34 Aligned_cols=29 Identities=21% Similarity=0.487 Sum_probs=24.8
Q ss_pred ccccCcccccCCCCccCCCCccceeccccCceeeccCCCCHHHHHHHHHhCCCCcEEEecC
Q 019589 155 HVFVDEFSCIGCKNCNNVAPEVFKIEEDFGRARVYNQCGINEFVQQAIESCPVDCIHRTSA 215 (338)
Q Consensus 155 ~v~vDe~~CiGCg~C~~vap~vF~iddd~G~a~v~~q~g~~e~v~~Av~~CP~~aI~~~~~ 215 (338)
.+.++-..|+.||-| --.||.+.|.|+-+
T Consensus 63 ~l~In~~nCleC~tC--------------------------------~i~~p~~nI~W~~P 91 (102)
T d2gmha3 63 RLQINAQNCVHCKTC--------------------------------DIKDPSQNINWVVP 91 (102)
T ss_dssp EEEECGGGCCCCCHH--------------------------------HHHCTTCCEEECCC
T ss_pred EEEEEeCCceeeccc--------------------------------eeeCCCCceEEECC
Confidence 567788899999999 77899999999865
No 54
>d1y5ib1 d.58.1.5 (B:1-509) Respiratory nitrate reductase 1 beta chain {Escherichia coli [TaxId: 562]}
Probab=34.40 E-value=9.7 Score=35.74 Aligned_cols=58 Identities=19% Similarity=0.186 Sum_probs=37.2
Q ss_pred ccccCcccccCCCC--ccCCCCccc-eeccccCceeeccCCCCHHHHHHHHHhCCCCcEEEec
Q 019589 155 HVFVDEFSCIGCKN--CNNVAPEVF-KIEEDFGRARVYNQCGINEFVQQAIESCPVDCIHRTS 214 (338)
Q Consensus 155 ~v~vDe~~CiGCg~--C~~vap~vF-~iddd~G~a~v~~q~g~~e~v~~Av~~CP~~aI~~~~ 214 (338)
..+.....|..|.+ |..+||..- ..+++.|.+.+-.. -.-.+..++.+||.++|.+..
T Consensus 176 ~~~~~~~~C~hC~~~~C~~~CP~gAi~~~~e~G~v~id~~--~CigC~~C~~aCPy~~~~~~~ 236 (509)
T d1y5ib1 176 FMMYLPRLCEHCLNPACVATCPSGAIYKREEDGIVLIDQD--KCRGWRMCITGCPYKKIYFNW 236 (509)
T ss_dssp CCEEEEECCCCCSSCHHHHHCTTCCEEEETTTCCEEECTT--TCCCCCCHHHHCTTCCEEEET
T ss_pred eEEEecccccCCCCchhhhhcCcCceEEecCCCcEEEchh--hccchHHHHhhCCCCCeEecC
Confidence 44455678999998 999999543 33444576544332 111123449999999998753
No 55
>d2b7ea1 a.159.2.1 (A:4-59) Pre-mRNA-processing protein PRP40 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=29.62 E-value=43 Score=21.56 Aligned_cols=48 Identities=13% Similarity=0.243 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHhcCCCCCCCChhHHHHHHH--H-HHHHHHc-CCh-hHhhhhhhhc
Q 019589 86 QIKKAYYNCMKACHPDLSGDDPETTNFCMF--I-NEVYAVL-SDP-VQRMVYDEIH 136 (338)
Q Consensus 86 eIk~aYr~l~~~~HPD~~~~~~~a~~~f~~--i-~~Ay~vL-sdp-~~R~~YD~~~ 136 (338)
|.+++|.+|.+..+=+..-. =++.... | ..-|-.| +|| .++..||.+.
T Consensus 1 Ea~~aF~~lL~e~~V~s~wt---Weq~~~~i~~~DPrY~al~~~~~eRK~~Fe~Y~ 53 (56)
T d2b7ea1 1 EAEKEFITMLKENQVDSTWS---FSRIISELGTRDPRYWMVDDDPLWKKEMFEKYL 53 (56)
T ss_dssp HHHHHHHHHHHHTTCCSSCC---HHHHHHHHHHHCTHHHHSCCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHcCCCCCCc---HHHHHHHHhccCcchHhhcCChHHHHHHHHHHh
Confidence 46889999999876554433 2333343 3 3689999 688 6888898863
No 56
>d1rgva_ d.58.1.1 (A:) Ferredoxin II {Thauera aromatica [TaxId: 59405]}
Probab=28.11 E-value=5.1 Score=27.81 Aligned_cols=22 Identities=27% Similarity=0.605 Sum_probs=18.3
Q ss_pred ccccCcccccCC------CCccCCCCcc
Q 019589 155 HVFVDEFSCIGC------KNCNNVAPEV 176 (338)
Q Consensus 155 ~v~vDe~~CiGC------g~C~~vap~v 176 (338)
...+|...|++| |.|..+||..
T Consensus 29 ~~~id~~~C~~C~~~~~~G~C~~vCP~~ 56 (80)
T d1rgva_ 29 IYVIDPTKCSECVGAFDEPQCRLVCPAD 56 (80)
T ss_dssp SCEECTTTCCTTTTTCSSCHHHHHCSSC
T ss_pred cccccCCCCcCCCCcCCCCcchhhcccc
Confidence 456788999999 7899999854
No 57
>d2bs2b1 a.1.2.1 (B:107-239) Fumarate reductase {Wolinella succinogenes [TaxId: 844]}
Probab=27.98 E-value=8.3 Score=28.85 Aligned_cols=9 Identities=33% Similarity=1.032 Sum_probs=8.0
Q ss_pred ccccCCCCc
Q 019589 161 FSCIGCKNC 169 (338)
Q Consensus 161 ~~CiGCg~C 169 (338)
..|.+||.|
T Consensus 100 ~~Ct~Cg~C 108 (133)
T d2bs2b1 100 FGCMTLLAC 108 (133)
T ss_dssp GGCCCCCHH
T ss_pred hhChhhCCC
Confidence 469999999
No 58
>d1vlfn2 d.58.1.5 (N:1-195) Transhydroxylase beta subunit, BthL, N-terminal domain {Pelobacter acidigallici [TaxId: 35816]}
Probab=23.09 E-value=21 Score=28.59 Aligned_cols=54 Identities=13% Similarity=0.316 Sum_probs=31.0
Q ss_pred cccccCCCC--ccCCCCccceeccccCceeeccCCCCHHHHHHHHHhCCCCcEEEecCc
Q 019589 160 EFSCIGCKN--CNNVAPEVFKIEEDFGRARVYNQCGINEFVQQAIESCPVDCIHRTSAQ 216 (338)
Q Consensus 160 e~~CiGCg~--C~~vap~vF~iddd~G~a~v~~q~g~~e~v~~Av~~CP~~aI~~~~~~ 216 (338)
...|..|.+ |+..++.....+ +.|.+.+-.+ ..-.....+.+||.++|.+....
T Consensus 65 ~~~C~hC~~p~Cv~~p~~A~~~~-e~G~V~id~~--kCiGC~~C~~aCPy~a~~~~~~~ 120 (195)
T d1vlfn2 65 PTPCMHCENAPCVAKGNGAVYQR-EDGIVLIDPE--KAKGKKELLDTCPYGVMYWNEEE 120 (195)
T ss_dssp EECCCCCTTCHHHHTTTTSEEEC-TTSCEEECTT--TTTTCGGGGGGCSSCCCEEETTT
T ss_pred hhhccCCcCccccccccceEEee-cccceeeehh--hccccchhhcCCCCCCeEccccc
Confidence 455777765 664444333333 4475544433 11123345999999999997543
No 59
>d1kf6b1 a.1.2.1 (B:106-243) Fumarate reductase {Escherichia coli [TaxId: 562]}
Probab=22.81 E-value=12 Score=28.51 Aligned_cols=9 Identities=33% Similarity=0.759 Sum_probs=7.8
Q ss_pred ccccCCCCc
Q 019589 161 FSCIGCKNC 169 (338)
Q Consensus 161 ~~CiGCg~C 169 (338)
..|++|+.|
T Consensus 97 ~~C~~C~~C 105 (138)
T d1kf6b1 97 WSCTFVGYC 105 (138)
T ss_dssp GGCCCCCHH
T ss_pred ccCchhCcc
Confidence 459999999
Done!