BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>019594
MKYLLYEVPVRVAGGLLFELLGQSAGDPFVDEDDIPIVLRSWQAQNFLITALHVKGPVSS
NNVLGITEVQELLFVGGYNVPRTVHEVIAHLACRLSRWDDRLFRKTIFGAADEIELKFVN
RRNLEDMNLFAIILNQEIRRLSRQVIRVKWSLHAREEIVFELYQHLRGNVARTLLEGIRK
NAREMIEEQEAVRGRLFTIQDVMQSTVRAWLQDRSLRVTHNLAVFGGCGVVLTVITGLFG
INVDGIPGADNTPYAFGLFTAILFFIGVVLIAVGLLYLGLKKPITEEQVEVRKLELQELV
KKFQHEAETHAQVRKNVRNNLTPTAGDIISDADYILIQ

High Scoring Gene Products

Symbol, full name Information P value
AT1G29820 protein from Arabidopsis thaliana 4.8e-149
AT1G29830 protein from Arabidopsis thaliana 1.2e-136
AT2G42950 protein from Arabidopsis thaliana 1.2e-127
SPO_A0218
magnesium transporter, CorA family
protein from Ruegeria pomeroyi DSS-3 1.8e-06
SO_3984
magnesium transporter, putative
protein from Shewanella oneidensis MR-1 0.00026

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  019594
        (338 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2019292 - symbol:AT1G29820 species:3702 "Arabi...  1455  4.8e-149  1
TAIR|locus:2019282 - symbol:AT1G29830 species:3702 "Arabi...  1338  1.2e-136  1
TAIR|locus:2045575 - symbol:AT2G42950 species:3702 "Arabi...  1253  1.2e-127  1
TIGR_CMR|SPO_A0218 - symbol:SPO_A0218 "magnesium transpor...   136  1.8e-06   1
TIGR_CMR|SO_3984 - symbol:SO_3984 "magnesium transporter,...   117  0.00026   1


>TAIR|locus:2019292 [details] [associations]
            symbol:AT1G29820 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0016020 "membrane"
            evidence=IEA] [GO:0030001 "metal ion transport" evidence=IEA]
            [GO:0046873 "metal ion transmembrane transporter activity"
            evidence=IEA] [GO:0055085 "transmembrane transport" evidence=IEA]
            InterPro:IPR002523 Pfam:PF01544 EMBL:CP002684 GO:GO:0016020
            GO:GO:0046873 IPI:IPI00532567 RefSeq:NP_001117384.1
            RefSeq:NP_174275.2 UniGene:At.40654 ProteinModelPortal:F4I348
            PRIDE:F4I348 EnsemblPlants:AT1G29820.1 EnsemblPlants:AT1G29820.2
            GeneID:839860 KEGG:ath:AT1G29820 OMA:TDGLICA Uniprot:F4I348
        Length = 540

 Score = 1455 (517.2 bits), Expect = 4.8e-149, P = 4.8e-149
 Identities = 274/338 (81%), Positives = 313/338 (92%)

Query:     1 MKYLLYEVPVRVAGGLLFELLGQSAGDPFVDEDDIPIVLRSWQAQNFLITALHVKGPVSS 60
             M++LLYEVPVRVAGGLLFELLGQS GDP + EDD+P+V RSWQA+NFL++ +H+KG V++
Sbjct:   207 MRHLLYEVPVRVAGGLLFELLGQSVGDPVISEDDVPVVFRSWQAKNFLVSVMHIKGNVTN 266

Query:    61 NNVLGITEVQELLFVGGYNVPRTVHEVIAHLACRLSRWDDRLFRKTIFGAADEIELKFVN 120
              NVLGITEV+ELL+ GGYNVPRTVHEVIAHLACRLSRWDDRLFRK+IFGAADEIELKF+N
Sbjct:   267 TNVLGITEVEELLYAGGYNVPRTVHEVIAHLACRLSRWDDRLFRKSIFGAADEIELKFMN 326

Query:   121 RRNLEDMNLFAIILNQEIRRLSRQVIRVKWSLHAREEIVFELYQHLRGNVARTLLEGIRK 180
             RRN ED+NLF+IILNQEIR+LSRQVIRVKWSLHAREEI+FEL QHLRGN+AR LL+G+RK
Sbjct:   327 RRNYEDLNLFSIILNQEIRKLSRQVIRVKWSLHAREEIIFELLQHLRGNIARHLLDGLRK 386

Query:   181 NAREMIEEQEAVRGRLFTIQDVMQSTVRAWLQDRSLRVTHNLAVFGGCGVVLTVITGLFG 240
             N REM+EEQEAVRGRLFTIQDVMQS+VRAWLQD+SLRV+HNLAVFGGCG+VLT+I GLFG
Sbjct:   387 NTREMLEEQEAVRGRLFTIQDVMQSSVRAWLQDKSLRVSHNLAVFGGCGLVLTIIVGLFG 446

Query:   241 INVDGIPGADNTPYAFGLFTAILFFIGVVLIAVGLLYLGLKKPITEEQVEVRKLELQELV 300
             INVDGIPGA NTPYAFGLFT ++  +G +LI VGL+YLGLKKPITEEQVEVRKLELQ++V
Sbjct:   447 INVDGIPGAQNTPYAFGLFTFLMVLLGAILIVVGLVYLGLKKPITEEQVEVRKLELQDVV 506

Query:   301 KKFQHEAETHAQVRKNVRNNLTPTAGDIISDADYILIQ 338
             K FQHEAETHAQ+R   RNNL+PTAGD+  DADYILIQ
Sbjct:   507 KIFQHEAETHAQLR---RNNLSPTAGDVF-DADYILIQ 540


>TAIR|locus:2019282 [details] [associations]
            symbol:AT1G29830 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0016020 "membrane"
            evidence=IEA] [GO:0030001 "metal ion transport" evidence=IEA]
            [GO:0046873 "metal ion transmembrane transporter activity"
            evidence=IEA] [GO:0055085 "transmembrane transport" evidence=IEA]
            InterPro:IPR002523 Pfam:PF01544 EMBL:CP002684 GO:GO:0016020
            GO:GO:0046873 UniGene:At.40654 IPI:IPI00939018
            RefSeq:NP_001154383.1 UniGene:At.66908 UniGene:At.73941
            ProteinModelPortal:F4I350 EnsemblPlants:AT1G29830.3 GeneID:839861
            KEGG:ath:AT1G29830 Uniprot:F4I350
        Length = 568

 Score = 1338 (476.1 bits), Expect = 1.2e-136, P = 1.2e-136
 Identities = 252/338 (74%), Positives = 294/338 (86%)

Query:     1 MKYLLYEVPVRVAGGLLFELLGQSAGDPFVDEDDIPIVLRSWQAQNFLITALHVKGPVSS 60
             M++LLYEVPVRV GGLLFELLGQS GDP + EDD+P+V RSWQA+NFL++ +H+KG VS 
Sbjct:   235 MRHLLYEVPVRVDGGLLFELLGQSMGDPVIGEDDVPVVFRSWQAKNFLVSVMHIKGNVSK 294

Query:    61 NNVLGITEVQELLFVGGYNVPRTVHEVIAHLACRLSRWDDRLFRKTIFGAADEIELKFVN 120
             +NVLGITEV+ELL+ G YNVPRT+HEVIAHLACRLSRWDDRLFRK+IFGAADEIELKF+N
Sbjct:   295 SNVLGITEVEELLYAGSYNVPRTIHEVIAHLACRLSRWDDRLFRKSIFGAADEIELKFMN 354

Query:   121 RRNLEDMNLFAIILNQEIRRLSRQVIRVKWSLHAREEIVFELYQHLRGNVARTLLEGIRK 180
             RRN ED+NLF+IILNQEIR+L+RQ IRVKWSLHAREEI+ EL QHLRGN+ R LLEG+R 
Sbjct:   355 RRNHEDLNLFSIILNQEIRKLARQTIRVKWSLHAREEIILELLQHLRGNIPRHLLEGLRN 414

Query:   181 NAREMIEEQEAVRGRLFTIQDVMQSTVRAWLQDRSLRVTHNLAVFGGCGVVLTVITGLFG 240
             N REM+EEQEAVRGRLFTIQD +QS +R+WLQD+SL  +HNLA+FGGCG+VLT+I GLF 
Sbjct:   415 NTREMLEEQEAVRGRLFTIQDNIQSNIRSWLQDQSLNGSHNLAIFGGCGLVLTIILGLFS 474

Query:   241 INVDGIPGADNTPYAFGLFTAILFFIGVVLIAVGLLYLGLKKPITEEQVEVRKLELQELV 300
             +N+DG+PG  +TPYAF LF+  L  IG+VLIA GL YLG KKPITEE VE RKLELQ +V
Sbjct:   475 VNLDGVPGVKHTPYAFVLFSVFLVLIGIVLIAFGLRYLGPKKPITEEHVEARKLELQNVV 534

Query:   301 KKFQHEAETHAQVRKNVRNNLTPTAGDIISDADYILIQ 338
             K FQHEAETHAQ+R   RNNL+PTAGD+  DADY LIQ
Sbjct:   535 KIFQHEAETHAQLR---RNNLSPTAGDVF-DADYFLIQ 568


>TAIR|locus:2045575 [details] [associations]
            symbol:AT2G42950 species:3702 "Arabidopsis thaliana"
            [GO:0005886 "plasma membrane" evidence=ISM] [GO:0016020 "membrane"
            evidence=IEA] [GO:0030001 "metal ion transport" evidence=IEA]
            [GO:0046873 "metal ion transmembrane transporter activity"
            evidence=IEA] [GO:0055085 "transmembrane transport" evidence=IEA]
            InterPro:IPR002523 Pfam:PF01544 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0046873 EMBL:BT009689
            EMBL:AK117816 IPI:IPI00525867 RefSeq:NP_181823.2 UniGene:At.36953
            ProteinModelPortal:Q8GY73 PaxDb:Q8GY73 PRIDE:Q8GY73
            EnsemblPlants:AT2G42950.1 GeneID:818896 KEGG:ath:AT2G42950
            TAIR:At2g42950 eggNOG:NOG241844 HOGENOM:HOG000029764
            InParanoid:Q8GY73 OMA:DEVELMF PhylomeDB:Q8GY73
            ProtClustDB:CLSN2680210 Genevestigator:Q8GY73 Uniprot:Q8GY73
        Length = 501

 Score = 1253 (446.1 bits), Expect = 1.2e-127, P = 1.2e-127
 Identities = 243/342 (71%), Positives = 285/342 (83%)

Query:     1 MKYLLYEVPVRVAGGLLFELLGQSAGDPFVDEDDIPIVLRSWQAQNFLITALHVKGPVSS 60
             MK++ YEVPVRVAGGLLFELLGQSAGDPF+ EDDIPIVLRSWQAQNFL+TALHVKG   +
Sbjct:   160 MKHIFYEVPVRVAGGLLFELLGQSAGDPFIQEDDIPIVLRSWQAQNFLVTALHVKGFALN 219

Query:    61 NNVLGITEVQELLFVGGYNVPRTVHEVIAHLACRLSRWDDRLFRKTIFGAADEIELKFVN 120
              +VLGITEVQE+L  GG  +PRTVHE+IAHLACRL+RWDDRLFRK IFGAADE+EL F+N
Sbjct:   220 ISVLGITEVQEMLIAGGACIPRTVHELIAHLACRLARWDDRLFRKYIFGAADEVELMFMN 279

Query:   121 RRNLEDMNLFAIILNQEIRRLSRQVIRVKWSLHAREEIVFELYQHLRGNVARTLLEGIRK 180
             +R  ED NLF  ILNQEIRRLS QVIRVKWSLHAREEIVFEL Q L+GN  + LLEGI+K
Sbjct:   280 KRLYEDPNLFTTILNQEIRRLSTQVIRVKWSLHAREEIVFELLQQLKGNRTKDLLEGIKK 339

Query:   181 NAREMIEEQEAVRGRLFTIQDVMQSTVRAWLQDRSLRVTHNLAVFGGCGVVLTVITGLFG 240
             + R+MI EQEAVRGRLFTIQDVMQ+TVRAWLQD+SL VTHNL +FGG G+++T++TGLFG
Sbjct:   340 STRDMINEQEAVRGRLFTIQDVMQNTVRAWLQDQSLTVTHNLGIFGGVGLLITIVTGLFG 399

Query:   241 INVDGIPGADNTPYAFGLFTAILFFIGVVLIAVGLLYLGLKKPITEEQVEVRKLELQELV 300
             INVDGIPGA + P AF LF+ +LF  G+VL+  GL+YLGLK+P+ EE VE RKLEL E+V
Sbjct:   400 INVDGIPGAKDFPQAFALFSVVLFVSGLVLVVAGLIYLGLKEPVAEENVETRKLELDEMV 459

Query:   301 KKFQHEAETHAQVRKNVRNNLTPTAGD---IISDAD-YILIQ 338
             KKFQ EAE+HAQV K V  N+  T      I+ D + Y+L++
Sbjct:   460 KKFQQEAESHAQVCKKVPQNIERTTSRSRMIVHDPNGYVLLE 501


>TIGR_CMR|SPO_A0218 [details] [associations]
            symbol:SPO_A0218 "magnesium transporter, CorA family"
            species:246200 "Ruegeria pomeroyi DSS-3" [GO:0015095 "magnesium ion
            transmembrane transporter activity" evidence=ISS] [GO:0015693
            "magnesium ion transport" evidence=ISS] InterPro:IPR002523
            Pfam:PF01544 GO:GO:0016020 GO:GO:0046873 EMBL:CP000032
            GenomeReviews:CP000032_GR HOGENOM:HOG000271325 KO:K16074
            OMA:LEENTRP RefSeq:YP_165047.1 ProteinModelPortal:Q5LL11
            GeneID:3196884 KEGG:sil:SPOA0218 PATRIC:23381770 Uniprot:Q5LL11
        Length = 322

 Score = 136 (52.9 bits), Expect = 1.8e-06, P = 1.8e-06
 Identities = 46/151 (30%), Positives = 72/151 (47%)

Query:   134 LNQEIRRLSRQVIRVKWSLHAREEIVFELYQHLRG---NVARTLLEGIRKNAREMIEEQE 190
             ++  +  L   VI+++  LH + E +  L ++  G   +    LL       R  IEE +
Sbjct:   178 MHDRLSALRLTVIKLRRYLHPQREALDALLRNEAGLFDSAGLVLLREAVDRTRRTIEELD 237

Query:   191 AVRGRLFTIQDVMQSTVRAWLQDRSLRVTHNLAVFGGCGVVLTVITGLFGINVDGIPGAD 250
             A R RL  +QD + S     L   S  ++   AVF    + L  +TGLFG+N+ G+PG  
Sbjct:   238 ATRDRLAAVQDQIASEQVRLLGRNSFVLSVVAAVF----LPLGFLTGLFGVNIAGMPGT- 292

Query:   251 NTPYAFGLFTAILFFIGVVLIAVGLLYLGLK 281
              TP AF L       +G+ ++   LL+  LK
Sbjct:   293 GTPLAFWLLAGASALLGLAIV---LLFRLLK 320


>TIGR_CMR|SO_3984 [details] [associations]
            symbol:SO_3984 "magnesium transporter, putative"
            species:211586 "Shewanella oneidensis MR-1" [GO:0015095 "magnesium
            ion transmembrane transporter activity" evidence=ISS] [GO:0015693
            "magnesium ion transport" evidence=ISS] InterPro:IPR002523
            Pfam:PF01544 GO:GO:0016020 EMBL:AE014299 GenomeReviews:AE014299_GR
            GO:GO:0046873 HOGENOM:HOG000271325 KO:K16074 OMA:LEENTRP
            RefSeq:NP_719514.1 ProteinModelPortal:Q8EAC3 GeneID:1171616
            KEGG:son:SO_3984 PATRIC:23527644 ProtClustDB:CLSK907441
            Uniprot:Q8EAC3
        Length = 321

 Score = 117 (46.2 bits), Expect = 0.00026, P = 0.00026
 Identities = 42/147 (28%), Positives = 70/147 (47%)

Query:   134 LNQEIRRLSRQVIRVKWSLHAREEIVFELY--QHLRGNVARTL-LEGIRKNAREMIEEQE 190
             L  +I  L RQ + ++  L  ++E   ++   Q +  N    L +     N    IE+ +
Sbjct:   177 LRTDIAELRRQTVALRRYLGPQKEAFAKMLSEQFVLFNEPEKLKMRETTNNLIRTIEDLD 236

Query:   191 AVRGRLFTIQDVMQSTVRAWLQDRSLRVTHNLAVFGGCGVVLTVITGLFGINVDGIPGAD 250
             A+R R    Q+ + S     L  R   ++    +F    + L  +TGL G+N+ GIPGAD
Sbjct:   237 ALRDRANVTQEELLSQQSEQLNKRLYFLSLVSVIF----LPLGFLTGLLGVNIGGIPGAD 292

Query:   251 NTPYAFGLFTAILFFIGVVLIAVGLLY 277
             N  +AF  F  IL  + +V + + +LY
Sbjct:   293 NN-FAFTSFCIIL--VSLVALQMVILY 316


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.325   0.141   0.411    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      338       338   0.00094  116 3  11 22  0.47    33
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  606 (64 KB)
  Total size of DFA:  211 KB (2117 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  29.91u 0.08s 29.99t   Elapsed:  00:00:01
  Total cpu time:  29.91u 0.08s 29.99t   Elapsed:  00:00:01
  Start:  Thu May  9 19:16:31 2013   End:  Thu May  9 19:16:32 2013

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