BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019598
(338 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q94AQ6|SIR4_ARATH NAD-dependent protein deacetylase SRT2 OS=Arabidopsis thaliana
GN=SRT2 PE=2 SV=1
Length = 373
Score = 429 bits (1102), Expect = e-119, Method: Compositional matrix adjust.
Identities = 203/284 (71%), Positives = 238/284 (83%), Gaps = 3/284 (1%)
Query: 29 NSSGMLARVKSEIVQSSIKAQQLLSKGRRVFPHQGSVKFVQTSWRMSIPGLPSSRHEDKA 88
N + V +++ S + L S G V +G +FV+T+ R+SIPG S +E KA
Sbjct: 2 NMRRVFGGVSTDLFPSRSMYRPLQSGGNLVMLFKGCRRFVRTTCRVSIPG-GSLGNESKA 60
Query: 89 PASPKVLRDKKAVPDADPPSIEDINQLYQFFDNSAKLIVLTGAGISTECGIPDYRSPNGA 148
P P+ LRD+K VPDADPP++EDI++LY+ F+ S++L +LTGAG+STECGIPDYRSPNGA
Sbjct: 61 P--PRFLRDRKIVPDADPPNMEDIHKLYRLFEQSSRLTILTGAGVSTECGIPDYRSPNGA 118
Query: 149 YSSGFKPITHQQFVRSSRARRRYWARSYAGWRRFMAAQPNPAHFALASLEKAGRIDCMIT 208
YSSGFKPITHQ+F RSSRARRRYWARSYAGWRRF AAQP PAH ALASLEKAGRI+ MIT
Sbjct: 119 YSSGFKPITHQEFTRSSRARRRYWARSYAGWRRFTAAQPGPAHTALASLEKAGRINFMIT 178
Query: 209 QNVDRLHHRAGSNPLELHGTVYTVVCLDCGFSFCRDLFQDQVKALNPKWAEAIESLDYGS 268
QNVDRLHHRAGS+PLELHGTVYTV+CL+CGFSF RDLFQDQ+KA+NPKWAEAIES+D+G
Sbjct: 179 QNVDRLHHRAGSDPLELHGTVYTVMCLECGFSFPRDLFQDQLKAINPKWAEAIESIDHGD 238
Query: 269 PGSDRSFGMKQRPDGDIEIDEKFWEEDFHIPTCQKCNGVLKPDV 312
PGS++SFGMKQRPDGDIEIDEKFWEE FHIP C+KC GVLKPDV
Sbjct: 239 PGSEKSFGMKQRPDGDIEIDEKFWEEGFHIPVCEKCKGVLKPDV 282
>sp|Q8IRR5|SIR4_DROME NAD-dependent protein deacetylase Sirt4 OS=Drosophila melanogaster
GN=Sirt4 PE=2 SV=2
Length = 312
Score = 186 bits (472), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 97/218 (44%), Positives = 134/218 (61%), Gaps = 19/218 (8%)
Query: 98 KKAVPDADPPSIEDINQLYQFFDNSAKLIVLTGAGISTECGIPDYRSPN-GAYS-SGFKP 155
++ VP P +DI +L F + ++VLTGAGISTE GIPDYRS G Y+ S KP
Sbjct: 21 QEYVPHHKPVVEDDIKRLEDFLLSKPNVLVLTGAGISTESGIPDYRSEGVGLYARSNHKP 80
Query: 156 ITHQQFVRSSRARRRYWARSYAGWRRFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLH 215
+ H +FV+SS R+RYWAR++ GW +F A QPN H ALA E+ R+ ++TQNVDRLH
Sbjct: 81 VQHMEFVKSSAVRKRYWARNFVGWPKFSATQPNATHHALARFEREERVQAVVTQNVDRLH 140
Query: 216 HRAGS-NPLELHGTVYTVVCLDCGFSFCRDLFQDQVKALNPKWAEAIESLDYGSPGSDRS 274
+AGS N +E+HG+ Y V CL C + R FQ + +LNP + +A + +
Sbjct: 141 TKAGSRNVVEVHGSGYVVKCLSCEYRIDRHEFQSILASLNPAFKDAPDMI---------- 190
Query: 275 FGMKQRPDGDIEIDEKFWEEDFHIPTCQKCNGVLKPDV 312
RPDGD+EI ++ E+F IP C +C G LKP++
Sbjct: 191 -----RPDGDVEIPLEYI-ENFRIPECTQCGGDLKPEI 222
>sp|Q1JQC6|SIR4_BOVIN NAD-dependent protein deacetylase sirtuin-4 OS=Bos taurus GN=SIRT4
PE=2 SV=1
Length = 315
Score = 184 bits (467), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 95/215 (44%), Positives = 135/215 (62%), Gaps = 19/215 (8%)
Query: 101 VPDADPPSIEDINQLYQFFDNSAKLIVLTGAGISTECGIPDYRSPN-GAYS-SGFKPITH 158
VP + P E + +L +F S +L+V+TGAGISTE GIPDYRS G Y+ + +PI H
Sbjct: 34 VPPSPPLDPEKVKELQRFITLSKRLLVMTGAGISTESGIPDYRSEKVGLYARTDRRPIQH 93
Query: 159 QQFVRSSRARRRYWARSYAGWRRFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRA 218
FVRS+ R+RYWAR++ GW +F + QPNPAH+AL++ E+ G++ ++TQNVD LH +A
Sbjct: 94 GDFVRSAPVRQRYWARNFVGWPQFSSRQPNPAHWALSNWERLGKLHWLVTQNVDALHTKA 153
Query: 219 GSNPL-ELHGTVYTVVCLDCGFSFCRDLFQDQVKALNPKWAEAIESLDYGSPGSDRSFGM 277
GS L ELHG ++ V+CLDCG R + Q++ + LNP W+ L
Sbjct: 154 GSQRLTELHGCMHRVLCLDCGEQTPRGVLQERFQVLNPTWSAEAHGLA------------ 201
Query: 278 KQRPDGDIEIDEKFWEEDFHIPTCQKCNGVLKPDV 312
PDGD+ + E+ + F +P+C +C G LKPDV
Sbjct: 202 ---PDGDVFLTEEE-VQSFQVPSCSRCGGPLKPDV 232
>sp|Q8R216|SIR4_MOUSE NAD-dependent protein deacetylase sirtuin-4 OS=Mus musculus
GN=Sirt4 PE=1 SV=3
Length = 333
Score = 184 bits (466), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 96/215 (44%), Positives = 135/215 (62%), Gaps = 19/215 (8%)
Query: 101 VPDADPPSIEDINQLYQFFDNSAKLIVLTGAGISTECGIPDYRSPN-GAYS-SGFKPITH 158
VP + P E I +L +F S KL+V+TGAGISTE GIPDYRS G Y+ + +PI H
Sbjct: 30 VPPSPPLDPEKIKELQRFISLSKKLLVMTGAGISTESGIPDYRSEKVGLYARTDRRPIQH 89
Query: 159 QQFVRSSRARRRYWARSYAGWRRFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRA 218
FVRS+ R+RYWAR++ GW +F + QPNPAH+AL++ E+ G++ ++TQNVD LH +A
Sbjct: 90 IDFVRSAPVRQRYWARNFVGWPQFSSHQPNPAHWALSNWERLGKLHWLVTQNVDALHSKA 149
Query: 219 GSNPL-ELHGTVYTVVCLDCGFSFCRDLFQDQVKALNPKWAEAIESLDYGSPGSDRSFGM 277
GS L ELHG ++ V+CL+CG R + Q++ +ALNP W+ + +
Sbjct: 150 GSQRLTELHGCMHRVLCLNCGEQTARRVLQERFQALNPSWSAEAQGVA------------ 197
Query: 278 KQRPDGDIEIDEKFWEEDFHIPTCQKCNGVLKPDV 312
PDGD+ + E+ F +P C +C G LKPDV
Sbjct: 198 ---PDGDVFLTEE-QVRSFQVPCCDRCGGPLKPDV 228
>sp|Q9Y6E7|SIR4_HUMAN NAD-dependent protein deacetylase sirtuin-4 OS=Homo sapiens
GN=SIRT4 PE=1 SV=1
Length = 314
Score = 181 bits (459), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 97/215 (45%), Positives = 133/215 (61%), Gaps = 19/215 (8%)
Query: 101 VPDADPPSIEDINQLYQFFDNSAKLIVLTGAGISTECGIPDYRSPN-GAYS-SGFKPITH 158
VP + P E + +L +F S +L+V+TGAGISTE GIPDYRS G Y+ + +PI H
Sbjct: 33 VPASPPLDPEKVKELQRFITLSKRLLVMTGAGISTESGIPDYRSEKVGLYARTDRRPIQH 92
Query: 159 QQFVRSSRARRRYWARSYAGWRRFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRA 218
FVRS+ R+RYWAR++ GW +F + QPNPAH+AL++ EK G++ ++TQNVD LH +A
Sbjct: 93 GDFVRSAPIRQRYWARNFVGWPQFSSHQPNPAHWALSTWEKLGKLYWLVTQNVDALHTKA 152
Query: 219 GSNPL-ELHGTVYTVVCLDCGFSFCRDLFQDQVKALNPKWAEAIESLDYGSPGSDRSFGM 277
GS L ELHG + V+CLDCG R + Q++ + LNP W+ L
Sbjct: 153 GSRRLTELHGCMDRVLCLDCGEQTPRGVLQERFQVLNPTWSAEAHGL------------- 199
Query: 278 KQRPDGDIEIDEKFWEEDFHIPTCQKCNGVLKPDV 312
PDGD+ + E+ F +PTC +C G LKPDV
Sbjct: 200 --APDGDVFLSEEQ-VRSFQVPTCVQCGGHLKPDV 231
>sp|F4P804|SIR4_BATDJ NAD-dependent protein deacetylase SIR4 OS=Batrachochytrium
dendrobatidis (strain JAM81 / FGSC 10211)
GN=BATDEDRAFT_20316 PE=3 SV=1
Length = 305
Score = 166 bits (421), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/201 (44%), Positives = 121/201 (60%), Gaps = 11/201 (5%)
Query: 118 FFDNSAKLIVLTGAGISTECGIPDYRSPNGAYSSG--FKPITHQQFVRSSRARRRYWARS 175
+ + ++LTGAG+ST+ GIPDYR P G YS FKPI +QQFV R+RYWARS
Sbjct: 25 LMRHHGQTVLLTGAGVSTDSGIPDYRGPQGIYSRNKDFKPIQYQQFVGPHEFRQRYWARS 84
Query: 176 YAGWRRFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRA----GSNPLELHGTVYT 231
+ GW + AQPN +H A+A+LE I ITQNVD LH RA N LE+HGT++
Sbjct: 85 FLGWPKVSQAQPNASHHAIAALESRSHIAGCITQNVDGLHRRAVVIENPNLLEIHGTLHW 144
Query: 232 VVCLDCGFSFCRDLFQDQVKALNPKWAEAIESLDYGSPGSDRSFGMKQRPDGDIEIDEKF 291
V C+ CG+ R Q+Q++ +NP E + L+ +D + + PDGD+EI K+
Sbjct: 145 VNCISCGYKLQRSAMQEQLQKINPIVYEW-QRLNPEKSNADVASSLN--PDGDVEI--KW 199
Query: 292 WEEDFHIPTCQKCNGVLKPDV 312
F P C +CNG+LKP+V
Sbjct: 200 DYNHFKYPHCPECNGLLKPNV 220
>sp|Q8PQK3|NPD_XANAC NAD-dependent protein deacetylase OS=Xanthomonas axonopodis pv.
citri (strain 306) GN=cobB PE=3 SV=2
Length = 293
Score = 159 bits (402), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 91/214 (42%), Positives = 122/214 (57%), Gaps = 24/214 (11%)
Query: 100 AVPDADPPSIEDINQLYQFFDNSAKLIVLTGAGISTECGIPDYRSPNGAYSSGFKPITHQ 159
AVP D +++D F + +L VLTGAG ST+ GIPDYR G + +P+T Q
Sbjct: 3 AVPAHDHHTLQD------FIERHQRLFVLTGAGCSTDSGIPDYRDLQGGWKRP-QPVTFQ 55
Query: 160 QFVRSSRARRRYWARSYAGWRRFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAG 219
F+ R+RYWARS GW RF AQPN H ALA+LE G+++ ++TQNVDRLH AG
Sbjct: 56 AFMGELSTRQRYWARSLVGWPRFGLAQPNATHHALAALEARGQLEVLLTQNVDRLHQAAG 115
Query: 220 SNP-LELHGTVYTVVCLDCGFSFCRDLFQDQVKALNPKWAEAIESLDYGSPGSDRSFGMK 278
S ++LHG + V C+ C R FQ ++ NP WA A+E+
Sbjct: 116 SQAVIDLHGRLDVVRCMGCERRMPRTEFQVLLEQANPGWA-ALEA--------------A 160
Query: 279 QRPDGDIEIDEKFWEEDFHIPTCQKCNGVLKPDV 312
Q PDGD ++D+ +E F +P C C GVLKP+V
Sbjct: 161 QAPDGDADLDDVAFEH-FVVPPCPVCGGVLKPNV 193
>sp|Q8FUC8|NPD1_COREF NAD-dependent protein deacetylase 1 OS=Corynebacterium efficiens
(strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC
100395) GN=cobB1 PE=3 SV=2
Length = 281
Score = 159 bits (401), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 86/207 (41%), Positives = 126/207 (60%), Gaps = 19/207 (9%)
Query: 108 SIEDINQLYQFFDNSAKLIVLTGAGISTECGIPDYRSPNGAYSSGFKPITHQQFVRSSRA 167
++E + +L + + ++ +TGAG+ST+ GIPDYRSP G+ + G +P+T+Q+F A
Sbjct: 6 ALEGVVKLLE----AGSVLAVTGAGVSTDSGIPDYRSPRGSLNQG-RPMTYQEFRFDPVA 60
Query: 168 RRRYWARSYAGWRRFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGS-NPLELH 226
RYWARS+ GWR AQPN H+AL LE+AG + ++TQNVD LH RAGS N + LH
Sbjct: 61 SHRYWARSFVGWRVMADAQPNRTHYALVELERAGLLSGIVTQNVDGLHRRAGSENLVALH 120
Query: 227 GTVYTVVCLDCGFSFCRDLFQDQVKALNPKWAEAIESLDYGSPGSDRSFGMKQRPDGDIE 286
G + T+VCL CG R+L ++ LNP + ++I +LD + PDGD+
Sbjct: 121 GDLATIVCLQCGHREARELLDARLDHLNPGYFDSI-ALDPSA----------VNPDGDVT 169
Query: 287 IDEKFWEEDFHIPTCQKCNGV-LKPDV 312
+D+ + F + C +C V LKPDV
Sbjct: 170 LDDHHVQR-FTMAGCARCGSVLLKPDV 195
>sp|Q89EA6|NPD2_BRAJA NAD-dependent protein deacetylase 2 OS=Bradyrhizobium japonicum
(strain USDA 110) GN=cobB2 PE=3 SV=2
Length = 273
Score = 156 bits (394), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/199 (42%), Positives = 110/199 (55%), Gaps = 18/199 (9%)
Query: 115 LYQFFDNSAKLIVLTGAGISTECGIPDYRSPNGAYSSGFKPITHQQFVRSSRARRRYWAR 174
L F +L VLTGAG ST GIPDYR +G + +P+ Q F+ RRRYWAR
Sbjct: 11 LQDFVARHQRLFVLTGAGCSTNSGIPDYRDSHGNWKRT-QPVNFQAFMSEEHTRRRYWAR 69
Query: 175 SYAGWRRFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGSNP-LELHGTVYTVV 233
S GWRRF A+PN AH ALA LE GR ++TQNVDRLH AG ++LHG + V
Sbjct: 70 SLIGWRRFGQARPNDAHHALARLEANGRCGMLLTQNVDRLHQSAGHRQVIDLHGRLDLVR 129
Query: 234 CLDCGFSFCRDLFQDQVKALNPKWAEAIESLDYGSPGSDRSFGMKQRPDGDIEIDEKFWE 293
C+ CG R FQD + N +W A+++ D PDGD +++ +
Sbjct: 130 CMGCGAKTPRSEFQDTLGRANAEWL-ALDASDA--------------PDGDADLEHADFS 174
Query: 294 EDFHIPTCQKCNGVLKPDV 312
F +P C+ C G+LKPDV
Sbjct: 175 S-FKVPACEACGGILKPDV 192
>sp|Q8PDM9|NPD_XANCP NAD-dependent protein deacetylase OS=Xanthomonas campestris pv.
campestris (strain ATCC 33913 / NCPPB 528 / LMG 568)
GN=cobB PE=3 SV=1
Length = 293
Score = 154 bits (389), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 84/199 (42%), Positives = 116/199 (58%), Gaps = 18/199 (9%)
Query: 115 LYQFFDNSAKLIVLTGAGISTECGIPDYRSPNGAYSSGFKPITHQQFVRSSRARRRYWAR 174
L +F + +L VL+GAG ST+ GIPDYR G + +P+T Q F+ R+RYWAR
Sbjct: 12 LQEFVERHQRLFVLSGAGCSTDSGIPDYRDLQGGWKRP-QPVTFQAFMGELSTRQRYWAR 70
Query: 175 SYAGWRRFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGSNP-LELHGTVYTVV 233
S GW RF A+PN H ALA+LE G+++ ++TQNVDRLH AGS ++LHG + V
Sbjct: 71 SLVGWPRFGLARPNATHHALAALEARGQLELLLTQNVDRLHQAAGSQAVIDLHGRLDVVR 130
Query: 234 CLDCGFSFCRDLFQDQVKALNPKWAEAIESLDYGSPGSDRSFGMKQRPDGDIEIDEKFWE 293
C+ C R FQ ++ NP WA+ +E+ Q PDGD ++D +
Sbjct: 131 CMGCEQRMPRTEFQLLLERDNPGWAD-LEA--------------AQAPDGDADLDNVAF- 174
Query: 294 EDFHIPTCQKCNGVLKPDV 312
++F +P C C GVLKPDV
Sbjct: 175 DNFVVPACPACGGVLKPDV 193
>sp|Q4UZX0|NPD_XANC8 NAD-dependent protein deacetylase OS=Xanthomonas campestris pv.
campestris (strain 8004) GN=cobB PE=3 SV=1
Length = 293
Score = 154 bits (389), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 84/199 (42%), Positives = 116/199 (58%), Gaps = 18/199 (9%)
Query: 115 LYQFFDNSAKLIVLTGAGISTECGIPDYRSPNGAYSSGFKPITHQQFVRSSRARRRYWAR 174
L +F + +L VL+GAG ST+ GIPDYR G + +P+T Q F+ R+RYWAR
Sbjct: 12 LQEFVERHQRLFVLSGAGCSTDSGIPDYRDLQGGWKRP-QPVTFQAFMGELSTRQRYWAR 70
Query: 175 SYAGWRRFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGSNP-LELHGTVYTVV 233
S GW RF A+PN H ALA+LE G+++ ++TQNVDRLH AGS ++LHG + V
Sbjct: 71 SLVGWPRFGLARPNATHHALAALEARGQLELLLTQNVDRLHQAAGSQAVIDLHGRLDVVR 130
Query: 234 CLDCGFSFCRDLFQDQVKALNPKWAEAIESLDYGSPGSDRSFGMKQRPDGDIEIDEKFWE 293
C+ C R FQ ++ NP WA+ +E+ Q PDGD ++D +
Sbjct: 131 CMGCEQRMPRTEFQLLLERDNPGWAD-LEA--------------AQAPDGDADLDNVAF- 174
Query: 294 EDFHIPTCQKCNGVLKPDV 312
++F +P C C GVLKPDV
Sbjct: 175 DNFVVPACPACGGVLKPDV 193
>sp|Q20480|SIR41_CAEEL NAD-dependent protein deacetylase sir-2.2 OS=Caenorhabditis elegans
GN=sir-2.2 PE=2 SV=1
Length = 287
Score = 151 bits (382), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 88/219 (40%), Positives = 124/219 (56%), Gaps = 16/219 (7%)
Query: 98 KKAVPDADPPSIEDINQLYQFFDNSAKLIVLTGAGISTECGIPDYRSPN-GAYSS-GFKP 155
+K VP+A + + KL+V++GAGISTE GIPDYRS + G Y+ KP
Sbjct: 3 QKFVPEAAELCENSLKKFISLIGTVDKLLVISGAGISTESGIPDYRSKDVGLYARIAHKP 62
Query: 156 ITHQQFVRSSRARRRYWARSYAGWRRFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLH 215
I Q ++RS+R R+RYW+R++ W RF A PN H+AL+ E + R +ITQNVD LH
Sbjct: 63 IYFQDYMRSNRCRQRYWSRNFLAWPRFGQAAPNINHYALSKWEASDRFQWLITQNVDGLH 122
Query: 216 HRAGSNPL-ELHGTVYTVVCLDCGFSFCRDLFQDQVKALNPKWAEAIESLDYGSPGSDRS 274
+AGS + ELHG+ V C C + R +QD++ NP + E ++ +PG
Sbjct: 123 LKAGSKMVTELHGSALQVKCTTCDYIESRQTYQDRLDYANPGFKE-----EHVAPG---- 173
Query: 275 FGMKQRPDGDIEIDEKFWEEDFHIPTCQKCNGVLKPDVS 313
+ PDGDI I E+ F IP C C G++K DV+
Sbjct: 174 ---ELAPDGDI-ILPLGTEKGFQIPECPSCGGLMKTDVT 208
>sp|B0RM75|NPD_XANCB NAD-dependent protein deacetylase OS=Xanthomonas campestris pv.
campestris (strain B100) GN=cobB PE=3 SV=1
Length = 293
Score = 150 bits (379), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/199 (41%), Positives = 115/199 (57%), Gaps = 18/199 (9%)
Query: 115 LYQFFDNSAKLIVLTGAGISTECGIPDYRSPNGAYSSGFKPITHQQFVRSSRARRRYWAR 174
L +F +L VL+GAG ST+ GIPDYR +G + +P+T Q F+ R+RYWAR
Sbjct: 12 LQEFIKRHQRLFVLSGAGCSTDSGIPDYRDLHGGWKRP-QPVTFQAFMGELSTRQRYWAR 70
Query: 175 SYAGWRRFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGSNP-LELHGTVYTVV 233
S GW RF A+PN H ALA+LE G+++ ++TQNVDRLH AGS ++LHG + V
Sbjct: 71 SLVGWPRFGLARPNATHHALAALEARGQLELLLTQNVDRLHQAAGSQAVIDLHGRLDVVR 130
Query: 234 CLDCGFSFCRDLFQDQVKALNPKWAEAIESLDYGSPGSDRSFGMKQRPDGDIEIDEKFWE 293
C+ C R FQ ++ NP WA+ +E+ Q PDGD ++D +
Sbjct: 131 CMGCEQRMPRTEFQLLLERDNPGWAD-LEA--------------AQAPDGDADLDSVAF- 174
Query: 294 EDFHIPTCQKCNGVLKPDV 312
++F +P C C VLKPDV
Sbjct: 175 DNFVVPACPACGCVLKPDV 193
>sp|Q20481|SIR42_CAEEL NAD-dependent protein deacetylase sir-2.3 OS=Caenorhabditis elegans
GN=sir-2.3 PE=3 SV=1
Length = 287
Score = 150 bits (378), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/219 (38%), Positives = 118/219 (53%), Gaps = 16/219 (7%)
Query: 98 KKAVPDADPPSIEDINQLYQFFDNSAKLIVLTGAGISTECGIPDYRSPN-GAYS-SGFKP 155
+K VP + + KL+++TGAGISTE GIPDYRS + G Y+ + +P
Sbjct: 3 RKYVPHTTELCENSLKKFKSLVGTVDKLLIITGAGISTESGIPDYRSKDVGLYTKTALEP 62
Query: 156 ITHQQFVRSSRARRRYWARSYAGWRRFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLH 215
I Q F++S + R+RYW+RSY W RF A PN H+AL+ E A + +ITQNVD LH
Sbjct: 63 IYFQDFMKSKKCRQRYWSRSYLNWPRFAQALPNFNHYALSKWEAANKFHWLITQNVDGLH 122
Query: 216 HRAGSNPL-ELHGTVYTVVCLDCGFSFCRDLFQDQVKALNPKWAEAIESLDYGSPGSDRS 274
+AGS + ELHG V C C + R +QD++ NP + E + SPG
Sbjct: 123 LKAGSKMITELHGNALQVKCTSCEYIETRQTYQDRLNYANPGFKE-----QFVSPG---- 173
Query: 275 FGMKQRPDGDIEIDEKFWEEDFHIPTCQKCNGVLKPDVS 313
+Q D D + E+ F IP C C G++K DV+
Sbjct: 174 ---QQELDADTALPLGS-EQGFKIPECLNCGGLMKTDVT 208
>sp|Q9RL35|NPD1_STRCO NAD-dependent protein deacetylase 1 OS=Streptomyces coelicolor
(strain ATCC BAA-471 / A3(2) / M145) GN=cobB1 PE=3 SV=1
Length = 299
Score = 146 bits (369), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/214 (40%), Positives = 117/214 (54%), Gaps = 22/214 (10%)
Query: 102 PDAD-PPSIEDINQLYQFFDNSAKLIVLTGAGISTECGIPDYRSPNGAYSSGFKPITHQQ 160
P AD PP D+ + + ++VL+GAGISTE GIPDYR G+ S P+T+Q
Sbjct: 11 PGADLPPGTTDLAPVADAL-RAGGVLVLSGAGISTESGIPDYRGEGGSLSR-HTPMTYQD 68
Query: 161 FVRSSRARRRYWARSYAGWRRFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGS 220
F ARRRYWARS+ GWR F A+PN H ++A+ + G + +ITQNVD LH AGS
Sbjct: 69 FTAHPEARRRYWARSHLGWRTFGRARPNAGHRSVAAFGRHGLLTGVITQNVDGLHQAAGS 128
Query: 221 -NPLELHGTVYTVVCLDCGFSFCRDLFQDQVKALNPKWAEAIESLDYGSPGSDRSFGMKQ 279
+ELHG++ VVCL CG R +++ N ++ ++
Sbjct: 129 EGVVELHGSLDRVVCLSCGVLSPRRELARRLEEANAGFSPVAAGIN-------------- 174
Query: 280 RPDGDIEI-DEKFWEEDFHIPTCQKCNGVLKPDV 312
PDGD ++ DE+ DF + C C GVLKPDV
Sbjct: 175 -PDGDADLTDEQVG--DFRVVPCAVCGGVLKPDV 205
>sp|A0QDH4|NPD1_MYCA1 NAD-dependent protein deacetylase 1 OS=Mycobacterium avium (strain
104) GN=cobB1 PE=3 SV=1
Length = 282
Score = 145 bits (367), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 109/190 (57%), Gaps = 17/190 (8%)
Query: 124 KLIVLTGAGISTECGIPDYRSPNGAYSSGFKPITHQQFVRSSRARRRYWARSYAGWRRFM 183
++ VLTGAGIST+ GIPDYR P S+ P+T +QF R+RYWAR++ GWR
Sbjct: 19 RIAVLTGAGISTDSGIPDYRGPESPPSN---PMTIRQFTGDPAFRQRYWARNHVGWRHMD 75
Query: 184 AAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGS-NPLELHGTVYTVVCLDCGFSFC 242
PN H ALA+LE A + +ITQNVD LH +AGS N ++LHG+ V+CL CG +
Sbjct: 76 DTLPNAGHRALAALEDAAVVTGVITQNVDLLHTKAGSRNVIDLHGSYARVICLGCGDTTS 135
Query: 243 RDLFQDQVKALNPKWAEAIESLDYGSPGSDRSFGMKQRPDGDIEIDEKFWEEDFHIPTCQ 302
R ++++ALNP + E E++ G+ PD D + E F C
Sbjct: 136 RAALAERLEALNPGFIERTEAIG----------GLAVAPDADAVVAET---ASFRYVDCA 182
Query: 303 KCNGVLKPDV 312
+C G+LKPD+
Sbjct: 183 RCAGMLKPDI 192
>sp|Q7WLE5|NPD_BORBR NAD-dependent protein deacetylase OS=Bordetella bronchiseptica
(strain ATCC BAA-588 / NCTC 13252 / RB50) GN=cobB PE=3
SV=1
Length = 274
Score = 142 bits (357), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/205 (41%), Positives = 116/205 (56%), Gaps = 18/205 (8%)
Query: 109 IEDINQLYQFFDNSAKLIVLTGAGISTECGIPDYRSPNGAYSSGFKPITHQQFVRSSRAR 168
+ D+ L F S +L VLTGAG ST GIPDYR G + PI Q F+ AR
Sbjct: 5 MSDLQALRGFLGGSERLFVLTGAGCSTASGIPDYRDGQGQWKRK-PPIDFQAFMGGQPAR 63
Query: 169 RRYWARSYAGWRRFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGSNP-LELHG 227
RYWARS GWR F A+PN AH ALA L + G++D ++TQNVDRLH AG L+LHG
Sbjct: 64 ARYWARSMVGWRHFGQARPNAAHHALARLAQRGQVDLLVTQNVDRLHQAAGGREVLDLHG 123
Query: 228 TVYTVVCLDCGFSFCRDLFQDQVKALNPKWAEAIESLDYGSPGSDRSFGMKQRPDGDIEI 287
+ V C+ C + R +Q ++ NP+WA +L G+ PDGD ++
Sbjct: 124 RLDEVRCMQCDWRGPRGPWQHTLELANPQWA----ALQAGAA-----------PDGDADL 168
Query: 288 DEKFWEEDFHIPTCQKCNGVLKPDV 312
+ + + F +P+C +C G++KPDV
Sbjct: 169 EGQDFSR-FVVPSCPRCGGIVKPDV 192
>sp|Q7VX46|NPD_BORPE NAD-dependent protein deacetylase OS=Bordetella pertussis (strain
Tohama I / ATCC BAA-589 / NCTC 13251) GN=cobB PE=3 SV=1
Length = 274
Score = 140 bits (352), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/205 (40%), Positives = 116/205 (56%), Gaps = 18/205 (8%)
Query: 109 IEDINQLYQFFDNSAKLIVLTGAGISTECGIPDYRSPNGAYSSGFKPITHQQFVRSSRAR 168
+ D+ L F S +L VLTGAG ST GIPDYR G + PI Q F+ AR
Sbjct: 5 MSDLQALRGFLGGSERLFVLTGAGCSTASGIPDYRDGQGQWKRK-PPIDFQAFMGGQPAR 63
Query: 169 RRYWARSYAGWRRFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGSNP-LELHG 227
RYWARS GWR F A+PN AH ALA L + G++D ++TQNVDRLH AG L+LHG
Sbjct: 64 ARYWARSMVGWRHFGQARPNAAHHALARLAQRGQVDLLVTQNVDRLHQAAGGREVLDLHG 123
Query: 228 TVYTVVCLDCGFSFCRDLFQDQVKALNPKWAEAIESLDYGSPGSDRSFGMKQRPDGDIEI 287
+ V C+ C + R +Q ++ NP+WA +L G+ PDG+ ++
Sbjct: 124 RLDEVRCMQCDWRGPRGPWQHTLELANPQWA----ALQAGAA-----------PDGNADL 168
Query: 288 DEKFWEEDFHIPTCQKCNGVLKPDV 312
+ + + F +P+C +C G++KPDV
Sbjct: 169 EGQDFSR-FVVPSCPRCGGIVKPDV 192
>sp|Q4QB33|SIR4_LEIMA NAD-dependent protein deacetylase SIR2rp2 OS=Leishmania major
GN=SIR2rp2 PE=3 SV=1
Length = 320
Score = 137 bits (345), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/207 (39%), Positives = 105/207 (50%), Gaps = 32/207 (15%)
Query: 126 IVLTGAGISTECGIPDYRSPNGAYS-SGFKPITHQQFVRSSRARRRYWARSYAGWRRFMA 184
+VLTGAG STE GIPDYR PNG Y + F +T Q+F+R +RRYWARS G+
Sbjct: 24 VVLTGAGCSTESGIPDYRGPNGQYHRADFVLLTFQKFMRDDNEKRRYWARSMLGYSTMCG 83
Query: 185 AQPNPAHFALASLEKAGRIDCMITQNVDRLHHRA------------------GSNPL-EL 225
A N AH AL + K+G + ++TQNVD LHH A PL EL
Sbjct: 84 ASCNAAHMALQAFTKSGAVAHILTQNVDGLHHLATYGGVGDAEEEHYYKYTTSDAPLKEL 143
Query: 226 HGTVYTVVCLDCGFSFCRDLFQDQVKALNPKWAEAIESLDYGSPGSDRSFGMKQRPDGDI 285
HG ++ V+C CGF R Q +++ NP + E YG+ S + RPDGD
Sbjct: 144 HGNIHNVICTSCGFFMPRARLQRELRERNPGFYE-----QYGADVS------RTRPDGDY 192
Query: 286 EIDEKFWEEDFHIPTCQKCNGVLKPDV 312
+ H+ C +CNG KP V
Sbjct: 193 SAPTEAVNA-MHLVMCPRCNGFFKPHV 218
>sp|A9UVV1|SIR4_MONBE NAD-dependent protein deacetylase SIR4 OS=Monosiga brevicollis
GN=15984 PE=3 SV=1
Length = 308
Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/204 (40%), Positives = 109/204 (53%), Gaps = 15/204 (7%)
Query: 110 EDINQLYQFFDNSAKLIVLTGAGISTECGIPDYRSPNGAYSSGFKPITHQQFVRSSRARR 169
E I L F + VLTGAGIST+ GIPDYRSP +P+ H +F+ S ++
Sbjct: 33 EGIKLLSAFLLRHEPVCVLTGAGISTDSGIPDYRSPG---RPPHRPLQHLEFLGSHERQQ 89
Query: 170 RYWARSYAGWRRFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGS-NPLELHGT 228
RYWARS G+ R PN H A+ L++ G + +ITQNVD LH RAGS + ++LHG
Sbjct: 90 RYWARSLYGYPRIRDTMPNVGHQAINELQRRGLVGAIITQNVDGLHQRAGSQHVIDLHGR 149
Query: 229 VYTVVCLDCGFSFCRDLFQDQVKALNPKWAEAIESLDYGSPGSDRSFGMKQRPDGDIEID 288
+ V C++C RD Q ++ A N LD S D + RPDGD +D
Sbjct: 150 LDQVKCMNCHSITTRDELQSRLLADNKAL------LDQFSVVHDEAV----RPDGDAVLD 199
Query: 289 EKFWEEDFHIPTCQKCNGVLKPDV 312
E + F + C C GVLKP+V
Sbjct: 200 EDLYGR-FTVAACASCGGVLKPNV 222
>sp|Q57YZ9|SIR4_TRYB2 NAD-dependent protein deacetylase SIR2rp2 OS=Trypanosoma brucei
brucei (strain 927/4 GUTat10.1) GN=SIR2rp2 PE=3 SV=1
Length = 306
Score = 130 bits (327), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/209 (36%), Positives = 104/209 (49%), Gaps = 32/209 (15%)
Query: 124 KLIVLTGAGISTECGIPDYRSPNGAYSS-GFKPITHQQFVRSSRARRRYWARSYAGWRRF 182
+ ++LTGAG STE G+PDYR PNG Y F P+T Q F+ S R+RYWARS G+
Sbjct: 16 RCVILTGAGCSTESGVPDYRGPNGLYRRPNFVPLTRQVFLSGSEHRKRYWARSMFGYNTV 75
Query: 183 MAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAG-------------------SNPL 223
A N H L L +AG ++ ++TQNVD LHH A S L
Sbjct: 76 SGASCNDTHMGLYELYRAGVVNRLLTQNVDGLHHLAAHGGTGSKTVEAYAKYTSSNSGVL 135
Query: 224 ELHGTVYTVVCLDCGFSFCRDLFQDQVKALNPKWAEAIESLDYGSPGSDRSFGMKQRPDG 283
ELHG ++ V C+ CG R Q ++ N + DY + S+ RPDG
Sbjct: 136 ELHGNIHQVCCMQCGDVSPRRRLQQRLCEANYQLCR-----DYEAEFSE------VRPDG 184
Query: 284 DIEIDEKFWEEDFHIPTCQKCNGVLKPDV 312
D E+ ++ + + C+ C G+LKP V
Sbjct: 185 DYEVPDRVVQA-MQLVCCEHCGGLLKPHV 212
>sp|Q882K4|NPD3_PSESM NAD-dependent protein deacetylase 3 OS=Pseudomonas syringae pv.
tomato (strain DC3000) GN=cobB3 PE=3 SV=1
Length = 281
Score = 129 bits (324), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/210 (41%), Positives = 121/210 (57%), Gaps = 20/210 (9%)
Query: 105 DPPSIEDINQLYQFFDNSAKLIVLTGAGISTECGIPDYRSPNGAYSSGFKPITHQQFVRS 164
D P+++ ++ L + + L+V TGAGIST GIPDYR +G G +P+ +Q+FV +
Sbjct: 3 DSPTLDLLDSLRRTMAEKSFLVV-TGAGISTASGIPDYRDKDGV-RRGAQPMMYQEFVGN 60
Query: 165 SRARRRYWARSYAGWRRFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGS-NPL 223
AR+RYWAR+ GW R A+Q N AH ALA+L+ I +ITQNVD LH +AGS + +
Sbjct: 61 PAARQRYWARAMLGWPRISASQANAAHRALAALQAENLIKGLITQNVDALHTQAGSQDVI 120
Query: 224 ELHGTVYTVVCLDCGFSFCRDLFQDQVKALNPKWAEAIESLDYGSPGSDRSFGMKQRPDG 283
ELHG+++ V+CLDC R Q+Q+ A N A+ + Q PDG
Sbjct: 121 ELHGSLHRVLCLDCQQRSDRTAIQEQMLAHNLYLADVHAT---------------QAPDG 165
Query: 284 DIEIDEKFWEEDFHIPTCQKCNGV-LKPDV 312
D +D + E F +P C C G LKPDV
Sbjct: 166 DTLLDPAY-EAGFKVPECPHCQGKRLKPDV 194
>sp|B5YJW3|NPD_THEYD NAD-dependent protein deacetylase OS=Thermodesulfovibrio
yellowstonii (strain ATCC 51303 / DSM 11347 / YP87)
GN=cobB PE=3 SV=1
Length = 256
Score = 117 bits (294), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 79/129 (61%), Gaps = 2/129 (1%)
Query: 110 EDINQLYQFFDNSAKLIVLTGAGISTECGIPDYRSPNGAYSSGFKPITHQQFVRSSRARR 169
E I++ Y+ S + TGAGISTE GIPD+RSPNG + F+ +T+Q+F+ +AR
Sbjct: 7 EKISKTYELIKKSTYSVAFTGAGISTESGIPDFRSPNGLWQR-FRIVTYQEFIIDRKARN 65
Query: 170 RYWARSYAGWRRFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGSNP-LELHGT 228
+W + + A+PN AH ALA LEK G + +ITQN+D LH AG+ +ELHG
Sbjct: 66 EFWKMKRELIQEIINAKPNNAHNALAELEKRGLLKYVITQNIDGLHQMAGNKSVIELHGN 125
Query: 229 VYTVVCLDC 237
+CLDC
Sbjct: 126 QRGYICLDC 134
>sp|Q8XNS6|NPD_CLOPE NAD-dependent protein deacetylase OS=Clostridium perfringens
(strain 13 / Type A) GN=cobB PE=3 SV=1
Length = 244
Score = 108 bits (270), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 93/207 (44%), Gaps = 50/207 (24%)
Query: 110 EDINQLYQFFDNSAKLIVLTGAGISTECGIPDYRSPNGAYSSGFK-PITHQQFVRSSRAR 168
+ IN+L + NS ++ GAG+STE GIPD+RS NG ++ T +Q V S
Sbjct: 3 DKINKLKEIIKNSNNIVFFGGAGVSTESGIPDFRSANGLFNEKLNITFTPEQLVSHSFFE 62
Query: 169 R--RYWARSYAGWRRFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGS-NPLEL 225
R + Y + ++PN AH ALA LE+ G++ ++TQN+D LH AGS N EL
Sbjct: 63 RYPEEFFNFYKAKLIYPNSKPNDAHIALAKLEEMGKLKAIVTQNIDGLHQMAGSKNVFEL 122
Query: 226 HGTVYTVVCLDCGFSFCRDLFQDQVKALNPKWAEAIESLDYGSPGSDRSFGMKQRPDGDI 285
HG+V C+DC +
Sbjct: 123 HGSVLRNYCVDCHTFY-------------------------------------------- 138
Query: 286 EIDEKFWEEDFHIPTCQKCNGVLKPDV 312
DEKF E +P C KC G++KPDV
Sbjct: 139 --DEKFILESKGVPKCTKCGGIVKPDV 163
>sp|Q89LY4|NPD1_BRAJA NAD-dependent protein deacetylase 1 OS=Bradyrhizobium japonicum
(strain USDA 110) GN=cobB1 PE=3 SV=1
Length = 254
Score = 108 bits (269), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 56/136 (41%), Positives = 78/136 (57%), Gaps = 4/136 (2%)
Query: 112 INQLYQFFDNSAKLIVLTGAGISTECGIPDYRSPNGAYSSGFKPITHQQFVRSSRARRRY 171
+ +L + ++ TGAGISTECGIPD+RSP G ++ +PI FV S AR
Sbjct: 12 VERLGDMIAEAKTIVPFTGAGISTECGIPDFRSPGGIWTRN-RPIPFDGFVASQEARDES 70
Query: 172 WARSYAGWRRFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAG---SNPLELHGT 228
W R +A F AA+P H ALASL +AG++ +ITQN+D LH +G + +ELHG
Sbjct: 71 WRRRFAMEETFAAARPGRGHRALASLYRAGKVPAVITQNIDNLHQASGFAHEHVIELHGN 130
Query: 229 VYTVVCLDCGFSFCRD 244
C+ CG ++ D
Sbjct: 131 TTYARCVGCGQTYQLD 146
>sp|Q6N6U0|NPD_RHOPA NAD-dependent protein deacetylase OS=Rhodopseudomonas palustris
(strain ATCC BAA-98 / CGA009) GN=cobB PE=3 SV=1
Length = 253
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 76/130 (58%), Gaps = 4/130 (3%)
Query: 112 INQLYQFFDNSAKLIVLTGAGISTECGIPDYRSPNGAYSSGFKPITHQQFVRSSRARRRY 171
+ QL +++ ++ TGAGISTE GIPD+RSP G +S +PI +FV AR
Sbjct: 10 VEQLGDMIAHASSIVPFTGAGISTESGIPDFRSPGGLWSRN-QPIPFDEFVARQDARDEA 68
Query: 172 WARSYAGWRRFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAG---SNPLELHGT 228
W R +A + F A+P H ALASL KAG++ +ITQN+D LH +G + +ELHG
Sbjct: 69 WRRRFAMEQTFAKARPARGHRALASLYKAGKVPAIITQNIDNLHQVSGFAEHDVVELHGN 128
Query: 229 VYTVVCLDCG 238
C+ CG
Sbjct: 129 TTYARCIGCG 138
>sp|Q97MB4|NPD_CLOAB NAD-dependent protein deacetylase OS=Clostridium acetobutylicum
(strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM
B-1787) GN=cobB PE=3 SV=1
Length = 245
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 96/208 (46%), Gaps = 49/208 (23%)
Query: 109 IEDINQLYQFFDNSAKLIVLTGAGISTECGIPDYRSPNGAYSSGFKPITHQQFVRSSRAR 168
++ IN+L + S+ ++ GAG+STE IPD+RS NG Y + + + S
Sbjct: 4 LDKINELKKIVAESSSIVFFGGAGVSTESNIPDFRSENGLYKTKNNFSYPPEVMLSHTFF 63
Query: 169 RRYWARSYAGWRR---FMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGS-NPLE 224
+ + + +R F A+PN AH++LA +E+ G++ ++TQN+D LH AGS N E
Sbjct: 64 KNHTEDFFEFYREKMIFKDAKPNAAHYSLAKIEEQGKLKAIVTQNIDGLHQLAGSKNVYE 123
Query: 225 LHGTVYTVVCLDCGFSFCRDLFQDQVKALNPKWAEAIESLDYGSPGSDRSFGMKQRPDGD 284
LHG+++ C+DCG SF D + +K
Sbjct: 124 LHGSIHRNYCMDCGKSF------------------------------DLEYVIKSETT-- 151
Query: 285 IEIDEKFWEEDFHIPTCQKCNGVLKPDV 312
IP C KC G++KPDV
Sbjct: 152 -------------IPKCDKCGGIVKPDV 166
>sp|Q9WYW0|NPD_THEMA NAD-dependent protein deacetylase OS=Thermotoga maritima (strain
ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=cobB PE=1
SV=1
Length = 246
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 74/128 (57%), Gaps = 6/128 (4%)
Query: 114 QLYQFFD--NSAKLIV-LTGAGISTECGIPDYRSPNGAYSSGFKPITHQQFVRSSRARRR 170
++ +F D N ++L V LTGAGIST GIPD+R PNG Y + + F S
Sbjct: 2 KMKEFLDLLNESRLTVTLTGAGISTPSGIPDFRGPNGIYKKYSQNVFDIDFFYSHPEEFY 61
Query: 171 YWARSYAGWRRFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGSNP-LELHGTV 229
+A+ G + A+PN AH LA LE+ G I+ +ITQN+DRLH RAGS +ELHG V
Sbjct: 62 RFAKE--GIFPMLQAKPNLAHVLLAKLEEKGLIEAVITQNIDRLHQRAGSKKVIELHGNV 119
Query: 230 YTVVCLDC 237
C+ C
Sbjct: 120 EEYYCVRC 127
>sp|Q8U1Q1|NPD_PYRFU NAD-dependent protein deacylase OS=Pyrococcus furiosus (strain ATCC
43587 / DSM 3638 / JCM 8422 / Vc1) GN=cobB PE=3 SV=2
Length = 250
Score = 96.3 bits (238), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 93/206 (45%), Gaps = 51/206 (24%)
Query: 112 INQLYQFFDNSAKLIVLTGAGISTECGIPDYRSPNGAYSS--GFKPITHQQFVRSSRARR 169
+ ++ + S+ I TGAGIS E GIP +R +G + + T + F R +
Sbjct: 2 LGEVSKILAKSSMAIAFTGAGISAESGIPTFRGKDGLWRKYRAEELATPEAFKRDPKLVW 61
Query: 170 RYWARSYAGWR--RFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGS-NPLELH 226
++ WR + + A+PNPAH ALA LEK G I +ITQNVD LH AGS N +ELH
Sbjct: 62 EFYK-----WRIKKILEAKPNPAHIALAELEKMGIIKAVITQNVDDLHREAGSKNVIELH 116
Query: 227 GTVYTVVCLDCGFSFCRDLFQDQVKALNPKWAEAIESLDYGSPGSDRSFGMKQRPDGDIE 286
G ++ V C C + R+ ++ SDR G
Sbjct: 117 GNIFRVKCTSCSY---REYLKE----------------------SDR-IG---------- 140
Query: 287 IDEKFWEEDFHIPTCQKCNGVLKPDV 312
W +P C KC +L+PDV
Sbjct: 141 -----WLLSQELPRCPKCGSLLRPDV 161
>sp|Q8ZU41|NPD1_PYRAE NAD-dependent protein deacetylase 1 OS=Pyrobaculum aerophilum
(strain ATCC 51768 / IM2 / DSM 7523 / JCM 9630 / NBRC
100827) GN=cobB1 PE=3 SV=1
Length = 254
Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 100/213 (46%), Gaps = 61/213 (28%)
Query: 108 SIEDINQLYQFFDNSAKLIVLTGAGISTECGIPDYRSPNGAYSSGFKPITHQQFVRSSRA 167
+ ++++++ S+ + LTGAG+ST GIPD+R P G + + + ++F S
Sbjct: 6 TTDELDEVASLIARSSCNVALTGAGVSTASGIPDFRGPQGVW----RRVDPEKFEISY-- 59
Query: 168 RRRYWARSYAGWRRFMA-------AQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGS 220
++ W F+ +PNPAH+ALA +E+ G++ +ITQNVDRLH AGS
Sbjct: 60 ---FYNNPDEVWDLFVKYLLPAFNVKPNPAHYALAEMERLGKLCAVITQNVDRLHQAAGS 116
Query: 221 -NPLELHGTVYTVVCLDCGFSFCRDLFQDQVKALNPKWAEAIESLDYGSPGSDRSFGMKQ 279
N +ELHG + VC +CG K+A A E+L + G+
Sbjct: 117 KNVIELHGALEYAVCTNCG----------------SKYALA-EALKWRKSGA-------- 151
Query: 280 RPDGDIEIDEKFWEEDFHIPTCQKCNGVLKPDV 312
P C KC GV+KPDV
Sbjct: 152 -------------------PRCPKCGGVIKPDV 165
>sp|O58669|NPD_PYRHO NAD-dependent protein deacylase OS=Pyrococcus horikoshii (strain
ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=cobB PE=3 SV=1
Length = 249
Score = 95.5 bits (236), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 97/205 (47%), Gaps = 53/205 (25%)
Query: 114 QLYQFFDNSAKLIVLTGAGISTECGIPDYRSPNGAYSSGFKP---ITHQQFVRSSRARRR 170
++ + +S +I TGAGIS E GIP +R +G + ++P T + F R+ +
Sbjct: 4 EVARVLASSKNVIAFTGAGISAESGIPTFRGKDGLWKK-YRPEELATPEAFERNPKL--- 59
Query: 171 YWARSYAGWR--RFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGS-NPLELHG 227
W + WR + + A+PNPAH+AL LEK G + +ITQNVD LH AG+ N +ELHG
Sbjct: 60 VW--DFYKWRIKKILKAKPNPAHYALVELEKMGILKAVITQNVDDLHREAGTKNLIELHG 117
Query: 228 TVYTVVCLDCGFSFCRDLFQDQVKALNPKWAEAIESLDYGSPGSDRSFGMKQRPDGDIEI 287
++ V C C F R+ ++ + I
Sbjct: 118 NIFRVRCTSCEF---REHLKESGR-----------------------------------I 139
Query: 288 DEKFWEEDFHIPTCQKCNGVLKPDV 312
DE E+ +P C KC +L+PDV
Sbjct: 140 DEILSED---LPKCPKCGSLLRPDV 161
>sp|O30124|NPD2_ARCFU NAD-dependent protein deacylase 2 OS=Archaeoglobus fulgidus (strain
ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=cobB2 PE=1 SV=1
Length = 253
Score = 95.1 bits (235), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 82/160 (51%), Gaps = 17/160 (10%)
Query: 110 EDINQLYQFFDNSAKLIVLTGAGISTECGIPDYRSPNGAYSSGFKPITHQQFVRSSRARR 169
++I + + S +V TGAGIS E GIP +R +G + + P R R
Sbjct: 3 DEIRKAAEILAKSKHAVVFTGAGISAESGIPTFRGEDGLWRK-YDPEEVASISGFKRNPR 61
Query: 170 RYWARSYAGWRRFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGS-NPLELHGT 228
+W S + + A+PNPAH+A+A LE+ G + +ITQN+D LH RAGS LELHG+
Sbjct: 62 AFWEFSME-MKDKLFAEPNPAHYAIAELERMGIVKAVITQNIDMLHQRAGSRRVLELHGS 120
Query: 229 VYTVVCLDCGFSFCRDLFQDQVKALNPKWAEAIESLDYGS 268
+ + CLDC ++ W+E +E + G
Sbjct: 121 MDKLDCLDCHETY--------------DWSEFVEDFNKGE 146
>sp|Q974M6|NPD_SULTO NAD-dependent protein deacetylase OS=Sulfolobus tokodaii (strain
DSM 16993 / JCM 10545 / NBRC 100140 / 7) GN=cobB PE=3
SV=2
Length = 250
Score = 94.7 bits (234), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 79/149 (53%), Gaps = 5/149 (3%)
Query: 111 DINQLYQFFDNSAKLIVLTGAGISTECGIPDYRSPNGAYSSGFKPITHQQFVRSSRARRR 170
+ +++ S I TGAGIST GIPD+R PNG + + ++ + + +
Sbjct: 2 ECDKVGDLLLTSTYAIAFTGAGISTASGIPDFRGPNGLWKKYSPELATIEYFK--KDPKG 59
Query: 171 YWARSYAGWRRFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGS-NPLELHGTV 229
+W R A PN AH+ALA LEK G I +ITQN+D LH AGS N +ELHG +
Sbjct: 60 FWEFYRLRMRGLFTALPNRAHYALAELEKMGLIRAIITQNIDGLHQLAGSRNVIELHGNM 119
Query: 230 YTVVCLDCGFSFCRDLFQDQV--KALNPK 256
C++C ++ D D++ + L PK
Sbjct: 120 RKCYCVNCLKTYDSDTVLDKIDKEGLPPK 148
>sp|Q97VX5|NPD_SULSO NAD-dependent protein deacetylase OS=Sulfolobus solfataricus
(strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=cobB
PE=1 SV=1
Length = 247
Score = 94.7 bits (234), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 69/119 (57%), Gaps = 6/119 (5%)
Query: 121 NSAKLIVLTGAGISTECGIPDYRSPNGAYSSGFKPITHQQFVRSSRARRRYWARSYAGWR 180
+S+ I TGAGIST GIPD+R P G + + ++ + + +W R
Sbjct: 12 SSSYTIAFTGAGISTASGIPDFRGPQGLWKKYSPELASIEYFE--KDPKNFWGFYSLRMR 69
Query: 181 RFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGS-NPLELHGTV---YTVVCL 235
AQPN AH++LA LEK G I +ITQN+D LH +AGS N +ELHGT+ Y V+CL
Sbjct: 70 GLFEAQPNKAHYSLAELEKMGIIKVIITQNIDGLHQKAGSKNVIELHGTMRRSYCVLCL 128
>sp|O28597|NPD1_ARCFU NAD-dependent protein deacylase 1 OS=Archaeoglobus fulgidus (strain
ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=cobB1 PE=1 SV=1
Length = 245
Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 75/134 (55%), Gaps = 12/134 (8%)
Query: 114 QLYQFFDNSAKLIVLTGAGISTECGIPDYRSPNGAYSSGFKP---ITHQQFVRSSRARRR 170
+L + S L+ LTGAG+S E GIP +R +G ++ ++P Q F + +
Sbjct: 4 KLLKTIAESKYLVALTGAGVSAESGIPTFRGKDGLWNR-YRPEELANPQAFAKDPEKVWK 62
Query: 171 YWARSYAGWR--RFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGS-NPLELHG 227
++A WR + AQPN AH A A LE+ G + C+ITQNVD LH RAGS N + LHG
Sbjct: 63 WYA-----WRMEKVFNAQPNKAHQAFAELERLGVLKCLITQNVDDLHERAGSRNVIHLHG 117
Query: 228 TVYTVVCLDCGFSF 241
++ V C C SF
Sbjct: 118 SLRVVRCTSCNNSF 131
>sp|A8MBU4|NPD_CALMQ NAD-dependent protein deacetylase OS=Caldivirga maquilingensis
(strain ATCC 700844 / DSMZ 13496 / JCM 10307 / IC-167)
GN=cobB PE=3 SV=1
Length = 257
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 85/196 (43%), Gaps = 45/196 (22%)
Query: 118 FFDNSAKLIVLTGAGISTECGIPDYRSPNGAYSSGFKPITHQQFVRSSRARRRYWARSYA 177
+S I TGAGISTE GIPD+R P G + + ++ + + +W
Sbjct: 16 ILTSSRHAIAFTGAGISTESGIPDFRGPQGLWRRFDPALASIDYLNTDP--KGFWEFYIE 73
Query: 178 GWRRFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGS-NPLELHGTVYTVVCLD 236
+R A+PN AH ALA LEK G I +ITQN+D LH AGS N +ELHG TV C+
Sbjct: 74 RFRVLNNARPNKAHLALAELEKLGIIKYVITQNIDNLHQSAGSINVIELHGNYTTVYCMR 133
Query: 237 CGFSFCRDLFQDQVKALNPKWAEAIESLDYGSPGSDRSFGMKQRPDGDIEIDEKFWEEDF 296
C + F + R +EE
Sbjct: 134 CKTQY--------------------------------PFTLALRK----------YEEGE 151
Query: 297 HIPTCQKCNGVLKPDV 312
+ P C KC G+L+P+V
Sbjct: 152 NPPRCPKCGGILRPNV 167
>sp|Q8R984|NPD2_THETN NAD-dependent protein deacetylase 2 OS=Thermoanaerobacter
tengcongensis (strain DSM 15242 / JCM 11007 / NBRC
100824 / MB4) GN=cobB2 PE=3 SV=1
Length = 250
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 81/167 (48%), Gaps = 14/167 (8%)
Query: 117 QFFDNSAKLIVLTGAGISTECGIPDYRSPNGAYSSGFKPITHQQFVRSSRARRRYWARSY 176
+ +S K +VLTGAGISTE GIPD+RSP P + ++ +
Sbjct: 15 ELIKSSQKTMVLTGAGISTESGIPDFRSPGTGLWENMDPTEVLSTKVLFNSPEEFYRVGF 74
Query: 177 AGWRRFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGSNPL-ELHGTVYTVVCL 235
A+PN AH+ L+ +EK G I +ITQN+D LH +AGS + E+HG CL
Sbjct: 75 KILSSMRNAEPNEAHYILSEMEKEGIIAGVITQNIDNLHQKAGSKKVYEVHGNTREGSCL 134
Query: 236 DCGFSFCRDLFQDQVKALNPKWAEAIESLDYGSPGSDRSFGMKQRPD 282
CG +L +++V A E + P DR GM RPD
Sbjct: 135 RCGEKVSFELLEEKV---------AKEEI---PPRCDRCGGM-LRPD 168
>sp|Q9UZE7|NPD_PYRAB NAD-dependent protein deacylase OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=cobB PE=3 SV=1
Length = 250
Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 76/134 (56%), Gaps = 12/134 (8%)
Query: 112 INQLYQFFDNSAKLIVLTGAGISTECGIPDYRSPNGAYSSGFKP---ITHQQFVRSSRAR 168
I ++ + +S I TGAGIS E G+P +R +G ++ ++P T + F R+ +
Sbjct: 2 IVEVARVLASSKNAIAFTGAGISAESGVPTFRGKDGLWNK-YRPEELATPEAFARNPKL- 59
Query: 169 RRYWARSYAGWR--RFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGS-NPLEL 225
W + WR + + A+PNPAH+AL LE G + +ITQNVD LH AG+ N +EL
Sbjct: 60 --VW--EFYKWRINKILKAKPNPAHYALVELEDMGILRAVITQNVDDLHREAGTRNLIEL 115
Query: 226 HGTVYTVVCLDCGF 239
HG ++ V C C F
Sbjct: 116 HGNIFRVKCTKCNF 129
>sp|Q6A5T5|NPD_PROAC NAD-dependent protein deacetylase OS=Propionibacterium acnes
(strain KPA171202 / DSM 16379) GN=cobB PE=3 SV=1
Length = 244
Score = 92.0 bits (227), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 75/130 (57%), Gaps = 4/130 (3%)
Query: 113 NQLYQFFDNSAKLIVLTGAGISTECGIPDYRSPNGAYSSGFKPITHQQFVRSSRARRRYW 172
QL + + S + GAG+STE GIPD+RS G Y++ +++ S +
Sbjct: 4 EQLAHWIEESTSTVFFGGAGMSTESGIPDFRSAGGLYTTQHDLPFPAEYMLSHSCLVEHP 63
Query: 173 ARSYAGWRRFMA---AQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGS-NPLELHGT 228
A + +R ++ A+PN H ALA+LE+AG++ +ITQN+D LH AGS +ELHG+
Sbjct: 64 AEFFDFYRTYLVHPQARPNAGHRALAALERAGQVSTIITQNIDGLHQEAGSRQVIELHGS 123
Query: 229 VYTVVCLDCG 238
V+ CL CG
Sbjct: 124 VHRNRCLACG 133
>sp|Q9YB13|NPD_AERPE NAD-dependent protein deacylase OS=Aeropyrum pernix (strain ATCC
700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
GN=cobB PE=3 SV=2
Length = 245
Score = 92.0 bits (227), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 90/210 (42%), Gaps = 59/210 (28%)
Query: 109 IEDINQLYQFFDNSAKLIVLTGAGISTECGIPDYRSPNGAYSSGFKP---ITHQQFVRSS 165
+E + + + NS + TGAGIS E GIP +R +G +S F P T + F R
Sbjct: 1 MEAVWESARILANSRFAVAFTGAGISAESGIPTFRGKDGLWSR-FDPRDLATPEAFNRDP 59
Query: 166 RARRRYWARSYAGWR--RFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGS-NP 222
R W + WR R +AA+PN AH LA LE +G + +ITQNVD LH RAGS
Sbjct: 60 RL---VW--EWYSWRIERVLAAKPNKAHRLLARLEDSGVLKAVITQNVDGLHRRAGSRRV 114
Query: 223 LELHGTVYTVVCLDCGFSFCRDLFQDQVKALNPKWAEAIESLDYGSPGSDRSFGMKQRPD 282
LELHG V C CG +W E +L
Sbjct: 115 LELHGNVLRARCTRCGSKL--------------EWREKPSNLP----------------- 143
Query: 283 GDIEIDEKFWEEDFHIPTCQKCNGVLKPDV 312
P+C +C GVL+PDV
Sbjct: 144 ----------------PSCPRCGGVLRPDV 157
>sp|Q8ZT00|NPD2_PYRAE NAD-dependent protein deacylase 2 OS=Pyrobaculum aerophilum (strain
ATCC 51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827)
GN=cobB2 PE=3 SV=1
Length = 249
Score = 91.7 bits (226), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 88/201 (43%), Gaps = 59/201 (29%)
Query: 118 FFDNSAKLIVLTGAGISTECGIPDYRSPNGAYSSGFKP---ITHQQFVRSSRARRRYWAR 174
+S +V TGAGIS E G+P +R P G + +KP T + F R R++
Sbjct: 6 LLASSRHCVVFTGAGISAESGVPTFRGPGGLWER-YKPEELATPEAFARDPALVWRWYK- 63
Query: 175 SYAGWRR--FMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGSN-PLELHGTVYT 231
WR+ A+P+P H+A+A LE G + +ITQNVD LH RAGS +ELHG+++
Sbjct: 64 ----WRQEVIYNARPSPGHYAIAELEAMGVVRGVITQNVDGLHQRAGSRLVVELHGSIWR 119
Query: 232 VVCLDCGFSFCRDLFQDQVKALNPKWAEAIESLDYGSPGSDRSFGMKQRPDGDIEIDEKF 291
C+ CG + D ++V
Sbjct: 120 ARCVKCGSVYILDKPVEEVP---------------------------------------- 139
Query: 292 WEEDFHIPTCQKCNGVLKPDV 312
P C+KC G+L+PDV
Sbjct: 140 -------PLCRKCGGLLRPDV 153
>sp|Q67KQ0|NPD_SYMTH NAD-dependent protein deacetylase OS=Symbiobacterium thermophilum
(strain T / IAM 14863) GN=cobB PE=3 SV=1
Length = 251
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 90/208 (43%), Gaps = 50/208 (24%)
Query: 109 IEDINQLYQFFDNSAKLIVLTGAGISTECGIPDYRSPNGAYSSGFKPITHQQFVRSSRAR 168
+E I + S + LTGAG STE G+PD+RS G + K + + + R
Sbjct: 2 LEQIQDFARALQASRYAVALTGAGASTESGLPDFRSNTGLW----KDVDPVSLISMTALR 57
Query: 169 RR---YWARSYAGWRRFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGS-NPLE 224
RR ++ + AQPNP H LA+L++ G + +ITQNVD LH AGS + +E
Sbjct: 58 RRPVDFYRFYRMRFSHLWGAQPNPVHKVLAALQREGLLKRLITQNVDGLHQAAGSPDVIE 117
Query: 225 LHGTVYTVVCLDCGFSFCRDLFQDQVKALNPKWAEAIESLDYGSPGSDRSFGMKQRPDGD 284
LHG++ CL CG F L D
Sbjct: 118 LHGSLRECQCLRCGRRFPSRLI-------------------------------------D 140
Query: 285 IEIDEKFWEEDFHIPTCQKCNGVLKPDV 312
+E+ E + IP C +C GVLKP V
Sbjct: 141 VEV-----ETEADIPRCPECGGVLKPGV 163
>sp|Q4JBN2|NPD_SULAC NAD-dependent protein deacetylase OS=Sulfolobus acidocaldarius
(strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 /
NCIMB 11770) GN=cobB PE=3 SV=2
Length = 252
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 92/208 (44%), Gaps = 52/208 (25%)
Query: 109 IEDINQLYQFFDNSAKLIVLTGAGISTECGIPDYRSPNG---AYSSGFKPITHQQFVRSS 165
+E+ ++ + +S I TGAGIST GIPD+R P G YS I + Q
Sbjct: 4 VEEAKKVAEMILSSVNAIAFTGAGISTASGIPDFRGPQGLWKKYSPELASIEYFQ----- 58
Query: 166 RARRRYWARSYAGWRRFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGS-NPLE 224
+ +W + A+PN AH+ALA LEK G I +ITQNVD LH AGS N +E
Sbjct: 59 KYPDAFWQFYSTRMKSLFEAKPNRAHYALAQLEKMGLIKAVITQNVDGLHSVAGSRNVIE 118
Query: 225 LHGTVYTVVCLDCGFSFCRDLFQDQVKALNPKWAEAIESLDYGSPGSDRSFGMKQRPDGD 284
LHG + C C S+ +SL+ + + G+
Sbjct: 119 LHGNMRKSYCTSCLRSY--------------------DSLEV----------LARVEKGE 148
Query: 285 IEIDEKFWEEDFHIPTCQKCNGVLKPDV 312
+ IP C+ C G+LKPDV
Sbjct: 149 V------------IPRCE-CGGILKPDV 163
>sp|Q5KZE8|NPD2_GEOKA NAD-dependent protein deacetylase 2 OS=Geobacillus kaustophilus
(strain HTA426) GN=cobB2 PE=3 SV=1
Length = 247
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 89/214 (41%), Gaps = 64/214 (29%)
Query: 109 IEDINQLYQFFDNSAKLIVLTGAGISTECGIPDYRSPNGAYSSGFKPITHQQFVRSSRAR 168
++ I QL Q+ + + VLTGAG+STE GIPD+RS NG Y+ + V +
Sbjct: 1 MDQIRQLAQWIKEANTIAVLTGAGMSTESGIPDFRSENGLYA-------QEDNVEYYLSE 53
Query: 169 RRYWARSYAGWRRFM---------AAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAG 219
Y WRRF PN H L LE+ G+ ++TQN+D LH +AG
Sbjct: 54 YYYKKDPVDFWRRFKRMFSLKMMGGFAPNDGHRFLRWLEEMGKTVTILTQNIDGLHTKAG 113
Query: 220 S-NPLELHGTVYTVVCLDCGFSFCRDLFQDQVKALNPKWAEAIESLDYGSPGSDRSFGMK 278
S N +ELHGT+ T C CG + D SF +
Sbjct: 114 STNVIELHGTLQTATCPSCGNKY------------------------------DLSFINR 143
Query: 279 QRPDGDIEIDEKFWEEDFHIPTCQKCNGVLKPDV 312
+P C+KC ++KPDV
Sbjct: 144 H-----------------EVPRCEKCQTIVKPDV 160
>sp|Q899G3|NPD_CLOTE NAD-dependent protein deacetylase OS=Clostridium tetani (strain
Massachusetts / E88) GN=cobB PE=3 SV=1
Length = 247
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 88/207 (42%), Gaps = 57/207 (27%)
Query: 114 QLYQFFDNSAKLIVLTGAGISTECGIPDYRSPNGAYSS----GFKP---ITHQQFVRSSR 166
L + +S+ ++ GAG+STE IPD+RS G Y + + P ++H F +
Sbjct: 6 NLKELIKSSSNIVFFGGAGVSTESNIPDFRSEEGLYKTKSNFSYSPEVMLSHSFFKEHTE 65
Query: 167 ARRRYWARSYAGWRRFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGS-NPLEL 225
++ + A+PN AH ALA LEK G++ +ITQN+D LH AGS N +EL
Sbjct: 66 DFFDFYKEKMI----YKYAKPNLAHHALAKLEKVGKLKAIITQNIDGLHQLAGSKNVIEL 121
Query: 226 HGTVYTVVCLDCGFSFCRDLFQDQVKALNPKWAEAIESLDYGSPGSDRSFGMKQRPDGDI 285
HG V C+DC + F D LN K
Sbjct: 122 HGGVGRNYCMDC------NKFFDLNYILNNKEV--------------------------- 148
Query: 286 EIDEKFWEEDFHIPTCQKCNGVLKPDV 312
+P C C G++KPDV
Sbjct: 149 ------------VPKCDVCGGIVKPDV 163
>sp|Q5JG47|NPD_PYRKO NAD-dependent protein deacylase OS=Pyrococcus kodakaraensis (strain
ATCC BAA-918 / JCM 12380 / KOD1) GN=cobB PE=3 SV=1
Length = 257
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 85/190 (44%), Gaps = 46/190 (24%)
Query: 126 IVLTGAGISTECGIPDYRSPNGAYSS--GFKPITHQQFVRSSRARRRYWARSYAGWRRFM 183
I TGAGIS E GIP +R NG + + + T + F R W R+ +
Sbjct: 16 IAFTGAGISAESGIPTFRGRNGLWKTYRAEELATPEAFKRDPHL---VWEFYKWRMRKIL 72
Query: 184 AAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGSNP-LELHGTVYTVVCLDCGFSFC 242
A+PNPAH ALA LE G + +ITQNVD LH AGS +ELHG ++ V C+ C +
Sbjct: 73 KAEPNPAHKALAELENMGVLKAVITQNVDDLHREAGSRKVVELHGNIFRVRCVSCSY--- 129
Query: 243 RDLFQDQVKALNPKWAEAIESLDYGSPGSDRSFGMKQRPDGDIEIDEKFWEEDFHIPTCQ 302
R+ ++ S R F + EK +P C
Sbjct: 130 RENLKE----------------------SGRVFEF---------VREK------ELPKCP 152
Query: 303 KCNGVLKPDV 312
KC +L+PDV
Sbjct: 153 KCGSLLRPDV 162
>sp|Q8CJM9|NPD2_STRCO NAD-dependent protein deacetylase 2 OS=Streptomyces coelicolor
(strain ATCC BAA-471 / A3(2) / M145) GN=cobB2 PE=3 SV=1
Length = 241
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 69/121 (57%), Gaps = 14/121 (11%)
Query: 127 VLTGAGISTECGIPDYRSPNGAYS---SGFKPITHQQFVRSSRARRRYWARSYAGWRRFM 183
+L+GAG+ST+ GIPDYR PNG + K +T++ ++ RRR W RR
Sbjct: 9 ILSGAGVSTDSGIPDYRGPNGLWRRDPEAEKLVTYEYYMGDPEIRRRSWL-----MRRDS 63
Query: 184 A---AQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGSNP---LELHGTVYTVVCLDC 237
A A+PN AH A+A LE+ G ++TQNVD LH AG + LELHGT VC C
Sbjct: 64 AALHAEPNAAHRAVADLERRGVPVRVLTQNVDGLHQLAGVSARKVLELHGTARDCVCTGC 123
Query: 238 G 238
G
Sbjct: 124 G 124
>sp|Q7P1B9|NPD_CHRVO NAD-dependent protein deacetylase OS=Chromobacterium violaceum
(strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 /
NCIMB 9131 / NCTC 9757) GN=cobB PE=3 SV=1
Length = 244
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 74/130 (56%), Gaps = 5/130 (3%)
Query: 112 INQLYQFFDNSAKLIVLTGAGISTECGIPDYRSPNGAYS---SGFKPITHQQFVRSSRAR 168
+ L Q D + ++ VLTGAG+STE GIPD+RS +G +S S ++ F R A
Sbjct: 8 LQYLRQLVDGARRIAVLTGAGMSTESGIPDFRSADGLWSRDMSLTDAVSVDYFRRDPAAF 67
Query: 169 RRYWARSYAGWRRFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGS-NPLELHG 227
R + R + QPN H LA+LE +G+ ++TQN+D LH RAGS LELHG
Sbjct: 68 WRAF-RDIFHIKLVGDYQPNDGHRFLAALEASGKEVTILTQNIDGLHGRAGSRRVLELHG 126
Query: 228 TVYTVVCLDC 237
T+ T C DC
Sbjct: 127 TLLTASCPDC 136
>sp|Q8REC3|NPD_FUSNN NAD-dependent protein deacetylase OS=Fusobacterium nucleatum subsp.
nucleatum (strain ATCC 25586 / CIP 101130 / JCM 8532 /
LMG 13131) GN=cobB PE=3 SV=1
Length = 252
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 70/138 (50%), Gaps = 4/138 (2%)
Query: 105 DPPSIEDINQLYQFFDNSAKLIVLTGAGISTECGIPDYRSPNGAYSSGFKPITHQQFVRS 164
D E I +L + N+ L+ GAG ST+ G+ D+R +G Y + +K + V S
Sbjct: 2 DSKRDEKILELVKILKNTKYLVFFGGAGTSTDSGVKDFRGKDGLYKTLYKDKYRPEEVLS 61
Query: 165 S---RARRRYWARSYAGWRRFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGS- 220
S + R + + +PN H AL LEK G + +ITQN+D LH +G+
Sbjct: 62 SDFFYSHRDIFMKYVEKELNIKGLKPNKGHMALVELEKIGILKAVITQNIDDLHQVSGNK 121
Query: 221 NPLELHGTVYTVVCLDCG 238
N LELHG++ CL CG
Sbjct: 122 NVLELHGSLKRWYCLSCG 139
>sp|Q72IV5|NPD_THET2 NAD-dependent protein deacylase OS=Thermus thermophilus (strain
HB27 / ATCC BAA-163 / DSM 7039) GN=cobB PE=3 SV=1
Length = 254
Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 76/140 (54%), Gaps = 10/140 (7%)
Query: 109 IEDINQLYQFFDNSAKLIVLTGAGISTECGIPDYRSPNGAYSSGFKPITHQQFVRSSRAR 168
+E + + + + + ++ VLTGAGIS GIP +R G + + F P+ + +R
Sbjct: 1 MERLEEARKRLEEAKRVAVLTGAGISKPSGIPTFRDAEGLWKN-FNPLDYATPEAYARDP 59
Query: 169 RRYWARSYAGWR--RFMAAQPNPAHFALASLEK----AGRIDCMITQNVDRLHHRAGS-N 221
+ WA + WR + A+PNPAH+AL LE+ G ++TQNVD LH RAGS N
Sbjct: 60 EKVWA--WYAWRIQKVREAKPNPAHYALVELERRILSRGGSFLLVTQNVDGLHARAGSQN 117
Query: 222 PLELHGTVYTVVCLDCGFSF 241
+ELHG + C CG F
Sbjct: 118 LVELHGNLLRARCEACGKRF 137
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 128,283,991
Number of Sequences: 539616
Number of extensions: 5281268
Number of successful extensions: 12508
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 170
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 11898
Number of HSP's gapped (non-prelim): 303
length of query: 338
length of database: 191,569,459
effective HSP length: 118
effective length of query: 220
effective length of database: 127,894,771
effective search space: 28136849620
effective search space used: 28136849620
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)