Query 019600
Match_columns 338
No_of_seqs 188 out of 478
Neff 6.8
Searched_HMMs 13730
Date Mon Mar 25 04:16:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019600.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/019600hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1i7na2 d.142.1.3 (A:215-420) 99.8 3.3E-20 2.4E-24 164.1 16.3 190 105-331 1-203 (206)
2 d1uc8a2 d.142.1.7 (A:89-280) L 99.8 7.4E-20 5.4E-24 157.6 13.3 173 116-327 1-189 (192)
3 d1ehia2 d.142.1.1 (A:135-362) 99.8 6.7E-18 4.9E-22 149.9 15.7 174 115-313 1-191 (228)
4 d1e4ea2 d.142.1.1 (A:132-342) 99.8 1E-17 7.4E-22 147.0 16.4 173 115-317 1-187 (211)
5 d1iowa2 d.142.1.1 (A:97-306) D 99.7 6.3E-17 4.6E-21 141.7 18.4 173 116-315 1-185 (210)
6 d1gsaa2 d.142.1.1 (A:123-314) 99.7 1.4E-16 9.9E-21 139.3 10.6 159 136-329 12-191 (192)
7 d1a9xa5 d.142.1.2 (A:128-402) 99.4 1.1E-11 7.7E-16 113.7 17.7 161 115-310 1-178 (275)
8 d2r7ka2 d.142.1.9 (A:124-361) 99.4 2.5E-12 1.9E-16 114.9 12.9 161 115-311 1-195 (238)
9 d1vkza3 d.142.1.2 (A:94-313) G 99.3 8.7E-12 6.4E-16 109.6 14.7 88 116-218 2-104 (220)
10 d1a9xa6 d.142.1.2 (A:677-935) 99.3 2.7E-12 2E-16 117.0 11.5 156 121-311 4-172 (259)
11 d1ulza3 d.142.1.2 (A:115-328) 99.3 4.5E-12 3.3E-16 111.4 11.7 159 116-312 1-181 (214)
12 d2r85a2 d.142.1.9 (A:100-334) 99.3 1.3E-11 9.8E-16 109.2 13.7 76 115-214 1-88 (235)
13 d3etja3 d.142.1.2 (A:79-276) N 99.3 5.8E-11 4.3E-15 101.4 15.5 164 115-313 1-169 (198)
14 d1w96a3 d.142.1.2 (A:184-450) 99.2 1.8E-11 1.3E-15 111.4 10.6 131 157-312 60-204 (267)
15 d1kjqa3 d.142.1.2 (A:113-318) 99.2 1.1E-10 8E-15 100.3 12.3 148 133-313 13-176 (206)
16 d2j9ga3 d.142.1.2 (A:115-330) 99.1 7.6E-11 5.5E-15 104.0 10.8 160 115-312 1-182 (216)
17 d1gsoa3 d.142.1.2 (A:104-327) 99.0 6.7E-10 4.9E-14 98.7 12.5 186 116-332 2-215 (224)
18 d1uc8a1 c.30.1.6 (A:1-88) Lysi 98.2 1.1E-06 8.2E-11 66.3 6.1 68 46-115 13-88 (88)
19 d2nu7b2 d.142.1.4 (B:1-238) Su 93.4 0.043 3.1E-06 47.3 5.5 63 117-189 6-70 (238)
20 d1eucb2 d.142.1.4 (B:0-245) Su 92.9 0.11 8.3E-06 44.5 7.4 89 116-215 6-123 (246)
21 d1gsaa1 c.30.1.3 (A:1-122) Pro 91.0 0.13 9.6E-06 39.7 5.0 64 49-113 24-122 (122)
22 d2pbza2 d.142.1.9 (A:100-312) 70.4 0.95 6.9E-05 37.8 2.3 59 134-208 11-72 (213)
23 d1dxha1 c.78.1.1 (A:1-150) Orn 69.0 3.6 0.00026 32.2 5.5 72 27-105 43-127 (150)
24 d1duvg1 c.78.1.1 (G:1-150) Orn 68.7 4.8 0.00035 31.4 6.2 72 28-105 43-126 (150)
25 d2io8a3 d.142.1.8 (A:201-378,A 66.4 7.6 0.00055 33.9 7.6 61 162-225 211-283 (297)
26 d1otha1 c.78.1.1 (A:34-184) Or 65.1 4.9 0.00035 31.4 5.6 72 27-105 44-128 (151)
27 d1vlva1 c.78.1.1 (A:1-152) Orn 62.6 8.3 0.0006 30.0 6.6 71 28-105 45-128 (152)
28 d1pvva1 c.78.1.1 (A:1-150) Orn 58.7 6.3 0.00046 30.7 5.1 71 28-105 44-127 (150)
29 d1ml4a1 c.78.1.1 (A:2-151) Asp 42.8 10 0.00075 29.4 3.9 74 28-107 42-128 (150)
30 d1pg5a1 c.78.1.1 (A:1-146) Asp 36.8 18 0.0013 27.6 4.5 73 27-106 36-122 (146)
31 d1js1x1 c.78.1.1 (X:1-163) Tra 29.3 91 0.0066 23.9 7.8 94 7-105 15-140 (163)
32 d3etja2 c.30.1.1 (A:1-78) N5-c 28.2 23 0.0017 24.3 3.3 58 48-107 15-74 (78)
33 d1kjqa2 c.30.1.1 (A:2-112) Gly 25.5 68 0.005 22.9 5.9 35 29-68 11-45 (111)
34 d1jyea_ c.93.1.1 (A:) Lac-repr 21.2 73 0.0053 25.4 6.0 37 30-66 1-39 (271)
35 d1krwa_ c.23.1.1 (A:) NTRC rec 21.0 38 0.0027 24.4 3.6 15 48-62 18-32 (123)
36 d1qo0d_ c.23.1.3 (D:) Positive 20.1 1.4E+02 0.01 22.3 7.2 33 46-80 24-57 (189)
No 1
>d1i7na2 d.142.1.3 (A:215-420) Synapsin II {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.83 E-value=3.3e-20 Score=164.13 Aligned_cols=190 Identities=13% Similarity=0.116 Sum_probs=121.6
Q ss_pred ChHHHHHHhccHHHHHH-HHHh-ccccCCCCCccCCcEEEEecCCCChhHHHHhcCCCCcEEEeeCCCCCCCcceeeEEE
Q 019600 105 DPPYAIQHLHNRQSMLQ-CVAD-MNLSNSYGKVDVPRQLVIERDASSIPDVVLKAGLTLPLVAKPLVADGSAKSHELSLA 182 (338)
Q Consensus 105 Dp~~ai~~l~dR~~~~~-~L~~-~~l~~~~~~i~~P~~~~~~~~~~~~~~~l~~~~l~fP~VvKp~~a~Gs~~sh~m~iv 182 (338)
|++++|++|.||..++. ++.. .++. ..++|++...... +..+ .....+||+|+||..++ +|+|+.++
T Consensus 1 Ns~~si~~~~dK~~v~~~l~~~~~~l~--~~~~p~~~~~~~~----~~~~--~~~~~~~PvVvKP~~g~---~g~Gv~~v 69 (206)
T d1i7na2 1 NSLESIYNFCDKPWVFAQMVAIFKTLG--GEKFPLIEQTYYP----NHRE--MLTLPTFPVVVKIGHAH---SGMGKVKV 69 (206)
T ss_dssp SCHHHHHHTSSHHHHHHHHHHHHHHHC--TTTSCBCCCEEES----SGGG--GSSCCCSSEEEEESSCS---TTTTEEEE
T ss_pred CCHHHHHHhcCcHHHHHHHHHHhcccC--CCccceeeccccc----chhH--HhhhcCCceEEecCCCC---CCCCeEEE
Confidence 78999999999954332 2211 1121 1255555543321 1222 23457899999998843 57899999
Q ss_pred eChhhHhcc-------CCCeEEEecccCCCcEEEEEEECCEEEEEEEecCCCCCcccccCCCceeeecCcccccccCCCC
Q 019600 183 YDQYSLKKL-------EPPLVLQEFVNHGGVLFKVYIVGEAIKVVRRFSLPDVTKQDLSTSAGVFRFPRVSCAAASADDA 255 (338)
Q Consensus 183 ~~~~~L~~l-------~~p~vvQeFI~h~g~~~KV~VIGd~v~~~~R~Slp~~~~~~~~~~~g~~~~~~~s~~~~~~~~~ 255 (338)
.+.++|... +.++++||||+ ++++++|+|+|+.+.++.|++.++ +|.++. .. ..
T Consensus 70 ~~~~~l~~~~~~~~~~~~~~~vqe~I~-~~~dirv~vig~~~~~~~~~~~~~----~~~~n~--------~~------~~ 130 (206)
T d1i7na2 70 ENHYDFQDIASVVALTQTYATAEPFID-AKYDIRVQKIGNNYKAYMRTSISG----NWKTNT--------GS------AM 130 (206)
T ss_dssp CSHHHHHHHHHHHHHHTCCEEEEECCC-EEEEEEEEEETTEEEEEEEESSCT----TTSCSC--------CC------SS
T ss_pred eecchhhhHHHHHhhccCeEEEEEeec-ccceEEEEEEecceeEEEeecccc----cccccc--------cc------Cc
Confidence 999888653 78999999996 468999999999999887775432 222221 10 00
Q ss_pred CCCccccCCCChHHHHHHHHHHHHHh-CCcEeEEEEEEeCCCCCeEEEEeccCCCCCCCcccch---HHHHHHHHHHHHh
Q 019600 256 DLDPCVAELPPRPLLERLAKELRRQL-GLRLFNLDIIREHGTRDQFYVIDINYFPGYGKMPEYE---HIFTDFLLSLTQS 331 (338)
Q Consensus 256 ~~~~~~~~~p~~~~~~~lA~~l~~~L-Gl~l~GvDvi~~~~~g~~~~ViDVN~fPg~~gv~~~~---~~l~~~l~~~i~~ 331 (338)
.. ...+. +..++++.++++.+ +++++|||++++. +| ++||+|||..|...-..... ..+.|.+.+.+++
T Consensus 131 ~~----~~~~~-~~~~~~~~~~~~~~~~~~~~gvD~~~~~-dG-~~yvlEvN~~~~~~~~~~~~~~~~~i~d~v~~~~~~ 203 (206)
T d1i7na2 131 LE----QIAMS-DRYKLWVDACSEMFGGLDICAVKAVHGK-DG-KDYIFEVMDCSMPLIGEHQVEDRQLITDLVISKMNQ 203 (206)
T ss_dssp EE----EECCC-HHHHHHHHHHTTGGGCCSEEEEEEEEET-TS-CEEEEEEECTTCCCCSSCHHHHHHHHHHHHHHHHHH
T ss_pred cc----cccCC-hHHHHHHHHHhhhccccceeeEEEEEcC-CC-CEEEEEEcCCCcccccchHHHHHHHHHHHHHHHHHH
Confidence 00 01112 33466666666666 5799999999985 45 79999999987643222221 3467777666654
No 2
>d1uc8a2 d.142.1.7 (A:89-280) Lysine biosynthesis enzyme LysX ATP-binding domain {Thermus thermophilus [TaxId: 274]}
Probab=99.81 E-value=7.4e-20 Score=157.56 Aligned_cols=173 Identities=16% Similarity=0.228 Sum_probs=114.2
Q ss_pred HHHHHHHHHhccccCCCCCccCCcEEEEecCCCChhHHHHhcCCCCcEEEeeCCCCCCCcceeeEEEeChhh--------
Q 019600 116 RQSMLQCVADMNLSNSYGKVDVPRQLVIERDASSIPDVVLKAGLTLPLVAKPLVADGSAKSHELSLAYDQYS-------- 187 (338)
Q Consensus 116 R~~~~~~L~~~~l~~~~~~i~~P~~~~~~~~~~~~~~~l~~~~l~fP~VvKp~~a~Gs~~sh~m~iv~~~~~-------- 187 (338)
|+.|.+.|+++ ||++|+|++++ +.+++.+.. ..++||+|+||..++| +.++.++.+.+.
T Consensus 1 K~~~~~~l~~~-------GipvP~t~~~~-~~~~~~~~~--~~~g~P~ivKP~~g~~---g~gv~~~~~~~~~~~~~~~~ 67 (192)
T d1uc8a2 1 KWATSVALAKA-------GLPQPKTALAT-DREEALRLM--EAFGYPVVLKPVIGSW---GRLLAXXXXXXXXXXXXXXK 67 (192)
T ss_dssp HHHHHHHHHHT-------TCCCCCEEEES-SHHHHHHHH--HHHCSSEEEECSBCCB---CSHHHHHHHHHC--------
T ss_pred CHHHHHHHHHc-------CcCCCCEEEEC-CHHHHHHHH--HHhCCCEEEECCcCCc---ccceeeccccccchhhHHHH
Confidence 78899999976 89999999985 333344333 3578999999988554 445543333322
Q ss_pred --Hhc-cCCCeEEEecccCCCcEEEEEEECCEEEEEEEecCCCCCcccccCCCceeeecCcccccccCCCCCCCccccCC
Q 019600 188 --LKK-LEPPLVLQEFVNHGGVLFKVYIVGEAIKVVRRFSLPDVTKQDLSTSAGVFRFPRVSCAAASADDADLDPCVAEL 264 (338)
Q Consensus 188 --L~~-l~~p~vvQeFI~h~g~~~KV~VIGd~v~~~~R~Slp~~~~~~~~~~~g~~~~~~~s~~~~~~~~~~~~~~~~~~ 264 (338)
+.. .+.++++||||+....+++++++|+++.....+....+.... .... .... .
T Consensus 68 ~~~~~~~~~~~lvqefi~g~~~~~~v~~~~g~~~~~~~~~~~~~~~~~-------------~~~~-~~~~---------~ 124 (192)
T d1uc8a2 68 EVLGGFQHQLFYIQEYVEKPGRDIRVFVVGERAIAAIYRRSAHWITNT-------------ARGG-QAEN---------C 124 (192)
T ss_dssp ----CTTTTCEEEEECCCCSSCCEEEEEETTEEEEEEEC----------------------------CEE---------C
T ss_pred HHHhccCCCCEEEEEecCCCCeeEEEEEECCEEEeEEEeeeccccccc-------------cccc-cccc---------c
Confidence 111 256899999999877899999999998876554432221110 0000 0000 0
Q ss_pred CChHHHHHHHHHHHHHhCCcEeEEEEEEeCCCCCeEEEEeccCCCCCCCcccc-----hHHHHHHHHH
Q 019600 265 PPRPLLERLAKELRRQLGLRLFNLDIIREHGTRDQFYVIDINYFPGYGKMPEY-----EHIFTDFLLS 327 (338)
Q Consensus 265 p~~~~~~~lA~~l~~~LGl~l~GvDvi~~~~~g~~~~ViDVN~fPg~~gv~~~-----~~~l~~~l~~ 327 (338)
........++.++.+++++.++|||++.++ + .+||+|||..||+.+++.. ...+.++..+
T Consensus 125 ~~~~~~~~~~~~~~~~~~~g~~~vD~~~~~--~-~~~vlEiN~r~g~~~~~~~~G~d~~~~ii~~a~~ 189 (192)
T d1uc8a2 125 PLTEEVARLSVKAAEAVGGGVVAVDLFESE--R-GLLVNEVNHTMEFKNSVHTTGVDIPGEILKYAWS 189 (192)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEEEEEEET--T-EEEEEEEETTCCCTTHHHHHCCCHHHHHHHHHHH
T ss_pred cchhhhhhhhhhHHHhhhccccceEEEecC--C-CEEEEEEcCCCchhHHHHHHCcCHHHHHHHHHHH
Confidence 112456888899999999999999999985 2 5899999999999887653 3445555443
No 3
>d1ehia2 d.142.1.1 (A:135-362) D-alanine:D-lactate ligase VanA, C-domain {Leuconostoc mesenteroides, Ddl2 [TaxId: 1245]}
Probab=99.75 E-value=6.7e-18 Score=149.88 Aligned_cols=174 Identities=16% Similarity=0.241 Sum_probs=116.1
Q ss_pred cHHHHHHHHHhccccCCCCCccCCcEEEEecCC---CChhHHHHhcCCCCcEEEeeCCCCCCCcceeeEEEeChhhHhcc
Q 019600 115 NRQSMLQCVADMNLSNSYGKVDVPRQLVIERDA---SSIPDVVLKAGLTLPLVAKPLVADGSAKSHELSLAYDQYSLKKL 191 (338)
Q Consensus 115 dR~~~~~~L~~~~l~~~~~~i~~P~~~~~~~~~---~~~~~~l~~~~l~fP~VvKp~~a~Gs~~sh~m~iv~~~~~L~~l 191 (338)
||..|.++|+++ ||+||++.+++... ..+.+ ....++||+|+||..++ +|++|.++.++++|...
T Consensus 1 dK~~~k~~l~~~-------gi~tp~~~~~~~~~~~~~~~~~--~~~~~g~P~VvKP~~g~---~s~GV~~~~~~~el~~~ 68 (228)
T d1ehia2 1 DKALTKELLTVN-------GIRNTKYIVVDPESANNWSWDK--IVAELGNIVFVKAANQG---SSVGISRVTNAEEYTEA 68 (228)
T ss_dssp SHHHHHHHHHTT-------TCCCCCEEEECTTGGGGCCHHH--HHHHHCSCEEEEESSCC---TTTTEEEECSHHHHHHH
T ss_pred CHHHHHHHHHHc-------CCCCCCEEEEchhhcChHHHHH--HHHHhCCCEEEEEeccC---CCccceeccccchhhhh
Confidence 799999999964 89999999995332 12222 12468999999998853 57899999999998752
Q ss_pred -------CCCeEEEecccCCCcEEEEEEECCE--EEE-EEEecCCCCCcccccCCCceeeecCccccccc---CCCCCCC
Q 019600 192 -------EPPLVLQEFVNHGGVLFKVYIVGEA--IKV-VRRFSLPDVTKQDLSTSAGVFRFPRVSCAAAS---ADDADLD 258 (338)
Q Consensus 192 -------~~p~vvQeFI~h~g~~~KV~VIGd~--v~~-~~R~Slp~~~~~~~~~~~g~~~~~~~s~~~~~---~~~~~~~ 258 (338)
...+++|||+. +++.+-+.++++. +.. ......+.... ..+.++++.....+.. ..+..++
T Consensus 69 ~~~~~~~~~~~liee~i~-g~~e~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~k~~~~~~~~~~~~~~~~ 142 (228)
T d1ehia2 69 LSDSFQYDYKVLIEEAVN-GARELEVGVIGNDQPLVSEIGAHTVPNQGS-----GDGWYDYNNKFVDNSAVHFQIPAQLS 142 (228)
T ss_dssp HHHHTTTCSCEEEEECCC-CSCEEEEEEEESSSCEEEEEEEEECTTSSS-----SSCCCCHHHHTTCCTTCEEESSCCCC
T ss_pred hhhhcccccccccceEEe-ccceEEEEEeeCCCcceeeeeeeecccccc-----ccceeeeeccccccccccccchhhhh
Confidence 56899999996 4578888887664 222 12222222111 2234444332111110 1122222
Q ss_pred ccccCCCChHHHHHHHHHHHHHhCCcEeE-EEEEEeCCCCCeEEEEeccCCCCCCC
Q 019600 259 PCVAELPPRPLLERLAKELRRQLGLRLFN-LDIIREHGTRDQFYVIDINYFPGYGK 313 (338)
Q Consensus 259 ~~~~~~p~~~~~~~lA~~l~~~LGl~l~G-vDvi~~~~~g~~~~ViDVN~fPg~~g 313 (338)
+.. .+.++++|.++.++||+.-++ +|++++. +| .+|++|||..|||..
T Consensus 143 ~~~-----~~~i~~~~~~~~~~lg~~~~~~iD~~~d~-~g-~~~~lEvN~~Pg~~~ 191 (228)
T d1ehia2 143 PEV-----TKEVKQMALDAYKVLNLRGEARMDFLLDE-NN-VPYLGEPNTLPGFTN 191 (228)
T ss_dssp HHH-----HHHHHHHHHHHHHHTTCCEEEEEEEEECT-TC-CEEEEEEESSCCCST
T ss_pred HHH-----HHHHHHHHHHHHhhhhcCCeeeEEEEEcC-CC-cEEEEEecCCCCCCc
Confidence 211 346788999999999998776 9999985 45 689999999999864
No 4
>d1e4ea2 d.142.1.1 (A:132-342) D-alanine:D-lactate ligase VanA, C-domain {Enterococcus faecium [TaxId: 1352]}
Probab=99.75 E-value=1e-17 Score=146.96 Aligned_cols=173 Identities=20% Similarity=0.352 Sum_probs=113.3
Q ss_pred cHHHHHHHHHhccccCCCCCccCCcEEEEecCCCChhHHHHhcCCCCcEEEeeCCCCCCCcceeeEEEeChhhHhc----
Q 019600 115 NRQSMLQCVADMNLSNSYGKVDVPRQLVIERDASSIPDVVLKAGLTLPLVAKPLVADGSAKSHELSLAYDQYSLKK---- 190 (338)
Q Consensus 115 dR~~~~~~L~~~~l~~~~~~i~~P~~~~~~~~~~~~~~~l~~~~l~fP~VvKp~~a~Gs~~sh~m~iv~~~~~L~~---- 190 (338)
||+.|.+++.++ ||+||++.+++.+.... ...++||+|+||..++| |-||.++.++++|..
T Consensus 1 DK~~~~~~~~~~-------Gi~tP~~~~~~~~~~~~-----~~~~~fP~viKP~~gg~---s~Gv~~v~~~~el~~~~~~ 65 (211)
T d1e4ea2 1 DKSLTYIVAKNA-------GIATPAFWVINKDDRPV-----AATFTYPVFVKPARSGS---SFGVKKVNSADELDYAIES 65 (211)
T ss_dssp SHHHHHHHHHHT-------TCBCCCEEEECTTCCCC-----GGGSCSCEEEEESSCCT---TTTCEEECSGGGHHHHHHH
T ss_pred CHHHHHHHHHHC-------CCCCCCeEEECchhHHH-----HHhcCCCEEEeeccccC---cchhccccccccchhhccc
Confidence 799999999975 89999999996443221 24689999999988543 678999999999864
Q ss_pred ---cCCCeEEEecccCCCcEEEEEEECCEEEEEEEecCCCCCcccccCCCceeeec-Ccccc-cc----cCCCCCCCccc
Q 019600 191 ---LEPPLVLQEFVNHGGVLFKVYIVGEAIKVVRRFSLPDVTKQDLSTSAGVFRFP-RVSCA-AA----SADDADLDPCV 261 (338)
Q Consensus 191 ---l~~p~vvQeFI~h~g~~~KV~VIGd~v~~~~R~Slp~~~~~~~~~~~g~~~~~-~~s~~-~~----~~~~~~~~~~~ 261 (338)
....+++|+|+ .|+.+.++++++....+.-.. . ......+..... ..... +. ...+....+.
T Consensus 66 ~~~~~~~~~~e~~~--~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~- 136 (211)
T d1e4ea2 66 ARQYDSKILIEQAV--SGCEVGCAVLGNSAALVVGEV--D----QIRLQYGIFRIHQEVEPEKGSENAVITVPADLSAE- 136 (211)
T ss_dssp HTTTCSSEEEEECC--CSEEEEEEEEEETTCCEECCC--E----EEEESSSCCCGGGSSSGGGCCSSEEECSSCSSCHH-
T ss_pred cccccccccccccc--ccccceeeccCCCcceeeeec--e----eeccccchhhhhhhhhhcccccceeeeccccccHh-
Confidence 25568999999 588999999976422111000 0 000000000000 00000 00 0011111111
Q ss_pred cCCCChHHHHHHHHHHHHHhCCc-EeEEEEEEeCCCCCeEEEEeccCCCCCCCcccc
Q 019600 262 AELPPRPLLERLAKELRRQLGLR-LFNLDIIREHGTRDQFYVIDINYFPGYGKMPEY 317 (338)
Q Consensus 262 ~~~p~~~~~~~lA~~l~~~LGl~-l~GvDvi~~~~~g~~~~ViDVN~fPg~~gv~~~ 317 (338)
..+.++++|.++.++||+. ++++|++++. +| +++|+|||..||+.....+
T Consensus 137 ----~~~~i~~~a~~~~~~lg~~g~~~id~~~~~-~g-~~~viEiN~~pg~~~~s~~ 187 (211)
T d1e4ea2 137 ----ERGRIQETVKKIYKTLGCRGLARVDMFLQD-NG-RIVLNEVNTLPGFTSYSRY 187 (211)
T ss_dssp ----HHHHHHHHHHHHHHHTTCEEEEEEEEEECT-TC-CEEEEEEESSCCCSTTCHH
T ss_pred ----hhhhhHHHHHHHHHhhccCCeeEEEEEEcC-CC-CEEEEEEeCCCCCCCccHH
Confidence 1346899999999999997 7789999985 45 7999999999998765433
No 5
>d1iowa2 d.142.1.1 (A:97-306) D-ala-D-ala ligase, C-domain {Escherichia coli, gene ddlB [TaxId: 562]}
Probab=99.73 E-value=6.3e-17 Score=141.72 Aligned_cols=173 Identities=19% Similarity=0.239 Sum_probs=113.5
Q ss_pred HHHHHHHHHhccccCCCCCccCCcEEEEecCC----CChhHHHHhcCCCCcEEEeeCCCCCCCcceeeEEEeChhhHhcc
Q 019600 116 RQSMLQCVADMNLSNSYGKVDVPRQLVIERDA----SSIPDVVLKAGLTLPLVAKPLVADGSAKSHELSLAYDQYSLKKL 191 (338)
Q Consensus 116 R~~~~~~L~~~~l~~~~~~i~~P~~~~~~~~~----~~~~~~l~~~~l~fP~VvKp~~a~Gs~~sh~m~iv~~~~~L~~l 191 (338)
|+.+-++|+++ |||||++.++++.. ..........+++||+|+||..++ +|.++.++.++++|..+
T Consensus 1 K~~tk~~~~~~-------Giptp~~~~~~~~~~~~~~~~~~~~~~~~l~~P~vvKP~~g~---~s~Gv~~v~~~~el~~~ 70 (210)
T d1iowa2 1 KLRSKLLWQGA-------GLPVAPWVALTRAEFEKGLSDKQLAEISALGLPVIVKPSREG---SSVGMSKVVAENALQDA 70 (210)
T ss_dssp HHHHHHHHHHT-------TCCBCCEEEEEHHHHHHCCCTHHHHHHHTTCSSEEEEETTCC---TTTTCEEESSGGGHHHH
T ss_pred CHHHHHHHHHc-------CCCCCCeEEEechhhcccchHHHHHHHHhcCCCEEEeecccc---CceecccccchhhhhHH
Confidence 67788899875 89999999995321 011111234579999999998854 57799999999998753
Q ss_pred -------CCCeEEEecccCCCcEEEEEEECCEEEEEEEecCCCCCcccccCCCceeeecCcccccccCCCCCCCccccCC
Q 019600 192 -------EPPLVLQEFVNHGGVLFKVYIVGEAIKVVRRFSLPDVTKQDLSTSAGVFRFPRVSCAAASADDADLDPCVAEL 264 (338)
Q Consensus 192 -------~~p~vvQeFI~h~g~~~KV~VIGd~v~~~~R~Slp~~~~~~~~~~~g~~~~~~~s~~~~~~~~~~~~~~~~~~ 264 (338)
+..+++|+|+ .|+++.|+++|+............. .+. ..+...+.. . ........++.
T Consensus 71 ~~~~~~~~~~vlve~~i--~g~e~~~~v~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~-~---~~~~~~~~~~~---- 136 (210)
T d1iowa2 71 LRLAFQHDEEVLIEKWL--SGPEFTVAILGEEILPSIRIQPSGT---FYD-YEAKFLSDE-T---QYFCPAGLEAS---- 136 (210)
T ss_dssp HHHHTTTCSEEEEEECC--CCCEEEEEEETTEECCCEEEECSSS---SSC-HHHHHTCSC-C---EEESSCCCCHH----
T ss_pred HHHhhccCccccccccc--cCceeEEEeecCcccceeEEecccc---eee-ecccccccc-c---ccccccccccc----
Confidence 5689999999 5999999999996542222111110 000 000000000 0 00011111111
Q ss_pred CChHHHHHHHHHHHHHhCCcE-eEEEEEEeCCCCCeEEEEeccCCCCCCCcc
Q 019600 265 PPRPLLERLAKELRRQLGLRL-FNLDIIREHGTRDQFYVIDINYFPGYGKMP 315 (338)
Q Consensus 265 p~~~~~~~lA~~l~~~LGl~l-~GvDvi~~~~~g~~~~ViDVN~fPg~~gv~ 315 (338)
....+++++.++.+++|..- +++|++.+. +| ++|++|||..||+....
T Consensus 137 -~~~~~~~~~~~~~~~~~~~g~~~vdf~~d~-~g-~~~~lEiN~~pg~~~~s 185 (210)
T d1iowa2 137 -QEANLQALVLKAWTTLGCKGWGRIDVMLDS-DG-QFYLLEANTSPGMTSHS 185 (210)
T ss_dssp -HHHHHHHHHHHHHHHHTCCSEEEEEEEECT-TS-CEEEEEEESSCCCSTTC
T ss_pred -cchhHHHHHHHHHHHhCCCCceEEEEEECC-CC-CEEEEEEeCCCCCCCcc
Confidence 13567899999999999994 459999985 56 69999999999987543
No 6
>d1gsaa2 d.142.1.1 (A:123-314) Prokaryotic glutathione synthetase, C-domain {Escherichia coli [TaxId: 562]}
Probab=99.66 E-value=1.4e-16 Score=139.30 Aligned_cols=159 Identities=14% Similarity=0.107 Sum_probs=103.7
Q ss_pred cCCcEEEEecCCCChhHHHHhcCCCCcEEEeeCCCCCCCcceeeEEEeChhhHh---------ccCCCeEEEecccC-CC
Q 019600 136 DVPRQLVIERDASSIPDVVLKAGLTLPLVAKPLVADGSAKSHELSLAYDQYSLK---------KLEPPLVLQEFVNH-GG 205 (338)
Q Consensus 136 ~~P~~~~~~~~~~~~~~~l~~~~l~fP~VvKp~~a~Gs~~sh~m~iv~~~~~L~---------~l~~p~vvQeFI~h-~g 205 (338)
.+|+|++.+ +.+++.+.+...+ |+|+||+. || +++++..+.+.+... ....++++|+|++. .+
T Consensus 12 ~~P~Tlit~-~~~~~~~f~~~~g---~vV~Kpl~--gs-~G~gv~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~ 84 (192)
T d1gsaa2 12 LTPETLVTR-NKAQLKAFWEKHS---DIILKPLD--GM-GGASIFRVKEGDPNLGVIAETLTEHGTRYCMAQNYLPAIKD 84 (192)
T ss_dssp TSCCEEEES-CHHHHHHHHHHHS---SEEEECSS--CC-TTTTCEEECTTCTTHHHHHHHHTTTTTSCEEEEECCGGGGG
T ss_pred cCCCeEEEC-CHHHHHHHHHHcC---CeEEEEcC--CC-eEEEEEEeecCchhhhHHHHHHHhcCccccccccccccccC
Confidence 389998874 4444555555443 99999998 45 688999987553311 13667899999987 57
Q ss_pred cEEEEEEECCEEEEE-EEecCCCCCcccccCCCceeeecCcccccccCCCCCCCccccCCCChHHHHHHHHHHHHHh---
Q 019600 206 VLFKVYIVGEAIKVV-RRFSLPDVTKQDLSTSAGVFRFPRVSCAAASADDADLDPCVAELPPRPLLERLAKELRRQL--- 281 (338)
Q Consensus 206 ~~~KV~VIGd~v~~~-~R~Slp~~~~~~~~~~~g~~~~~~~s~~~~~~~~~~~~~~~~~~p~~~~~~~lA~~l~~~L--- 281 (338)
.|+||+|||++++++ .|++..+ ++|.++ .+.++ ...... +.+..+++|.+++++|
T Consensus 85 ~d~Rv~vv~~~~~~a~~r~~~~~---~~~~~n--------~~~Gg-~~~~~~---------~~~~~~~~a~~~~~~l~~~ 143 (192)
T d1gsaa2 85 GDKRVLVVDGEPVPYCLARIPQG---GETRGN--------LAAGG-RGEPRP---------LTESDWKIARQIGPTLKEK 143 (192)
T ss_dssp CEEEEEEETTEECSEEEEEECCS---SCSCCC--------GGGTC-EEEEEE---------CCHHHHHHHHHHHHHHHHT
T ss_pred ceeEEEEECCcceEEEEEecccC---Ccchhh--------hhccC-cceeec---------ccHHHHHHHHHHHHHHHhh
Confidence 899999999999964 6664321 122221 12111 111111 1244577777777766
Q ss_pred CCcEeEEEEEEeCCCCCeEEEEecc--CCCCCCCcccc-----hHHHHHHHHHHH
Q 019600 282 GLRLFNLDIIREHGTRDQFYVIDIN--YFPGYGKMPEY-----EHIFTDFLLSLT 329 (338)
Q Consensus 282 Gl~l~GvDvi~~~~~g~~~~ViDVN--~fPg~~gv~~~-----~~~l~~~l~~~i 329 (338)
|+.+.|||+| ++ +++||| ..|||+++++. ...+.|+|.+++
T Consensus 144 gl~~~gVDii-----~~--~~~EiNv~s~~g~~~l~~~~g~~ia~~ivd~l~~ki 191 (192)
T d1gsaa2 144 GLIFVGLDII-----GD--RLTEINVTSPTCIREIEAEFPVSITGMLMDAIEARL 191 (192)
T ss_dssp TCCEEEEEEE-----TT--EEEEEECSSCCCHHHHHHHSSCCHHHHHHHHHHHHT
T ss_pred cCceEEEEee-----CC--eEEEEEcCCcHHHHHHHHHHCCCHHHHHHHHHHHHh
Confidence 9999999999 22 456666 66999888776 356666666554
No 7
>d1a9xa5 d.142.1.2 (A:128-402) Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains {Escherichia coli [TaxId: 562]}
Probab=99.36 E-value=1.1e-11 Score=113.70 Aligned_cols=161 Identities=14% Similarity=0.192 Sum_probs=106.0
Q ss_pred cHHHHHHHHHhccccCCCCCccCCcEEEEecCCCChhHHHHhcCCCCcEEEeeCCCCCCCcceeeEEEeChhhHhcc---
Q 019600 115 NRQSMLQCVADMNLSNSYGKVDVPRQLVIERDASSIPDVVLKAGLTLPLVAKPLVADGSAKSHELSLAYDQYSLKKL--- 191 (338)
Q Consensus 115 dR~~~~~~L~~~~l~~~~~~i~~P~~~~~~~~~~~~~~~l~~~~l~fP~VvKp~~a~Gs~~sh~m~iv~~~~~L~~l--- 191 (338)
||.+.-+++.++ |||+|++..++ +.+++.+. ...++||+|+||..+ + ++++|.++.++++|.+.
T Consensus 1 Dr~~~r~~~~~~-------gip~~~~~~~~-~~~ea~~~--~~~ig~PvviKp~~~--~-gg~G~~~v~~~~el~~~~~~ 67 (275)
T d1a9xa5 1 DRRRFDVAMKKI-------GLETARSGIAH-TMEEALAV--AADVGFPCIIRPSFT--M-GGSGGGIAYNREEFEEICAR 67 (275)
T ss_dssp SHHHHHHHHHHT-------TCCCCSEEEES-SHHHHHHH--HHHHCSSEEEEETTC--C-TTTTCEEESSHHHHHHHHHH
T ss_pred CHHHHHHHHHHC-------CCCCCCceEeC-CHHHHHHH--HHHcCCCEEEEECCC--C-CCCceEEeeCHHHHHHHHHH
Confidence 677777888876 89999999885 33333332 245899999999663 3 68899999999988753
Q ss_pred ------CCCeEEEecccCCCcEEEEEEECC----EEEE-EEEecCCCC-CcccccCCCceeeecCcccccccCCCCCCCc
Q 019600 192 ------EPPLVLQEFVNHGGVLFKVYIVGE----AIKV-VRRFSLPDV-TKQDLSTSAGVFRFPRVSCAAASADDADLDP 259 (338)
Q Consensus 192 ------~~p~vvQeFI~h~g~~~KV~VIGd----~v~~-~~R~Slp~~-~~~~~~~~~g~~~~~~~s~~~~~~~~~~~~~ 259 (338)
+.+++++|||. +.+.+-|.++++ .+++ ...+--+.. ..++ .+ ..+....+++
T Consensus 68 a~~~~~~~~v~iEe~l~-g~~e~~v~~~~d~~g~~~~~~~~~~~~~~~~~~~~-----------~~----~~aP~~~L~~ 131 (275)
T d1a9xa5 68 GLDLSPTKELLIDESLI-GWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGD-----------SI----TVAPAQTLTD 131 (275)
T ss_dssp HHHHCTTSCEEEEECCT-TSEEEEEEEEECTTCCEEEEEEEEESSCTTSCGGG-----------SC----EEESCCSCCH
T ss_pred HHhhCCCCcEEEeeecC-CchhheeeeEEecCCCEEEEEeeccccccCcccCc-----------ee----EEcCCCcCCH
Confidence 57899999997 346788888743 3332 222211111 0000 00 0011111221
Q ss_pred cccCCCChHHHHHHHHHHHHHhCCc--EeEEEEEEeCCCCCeEEEEeccCCCC
Q 019600 260 CVAELPPRPLLERLAKELRRQLGLR--LFNLDIIREHGTRDQFYVIDINYFPG 310 (338)
Q Consensus 260 ~~~~~p~~~~~~~lA~~l~~~LGl~--l~GvDvi~~~~~g~~~~ViDVN~fPg 310 (338)
.. .+.+.++|.++.++||+. .+.+.++++..+| ++|++|+|.-++
T Consensus 132 ~~-----~~~i~~~a~~i~~~lg~~~G~~~~ef~~~~~~~-~~~~iE~npR~~ 178 (275)
T d1a9xa5 132 KE-----YQIMRNASMAVLREIGVETGGSNVQFAVNPKNG-RLIVIEMNPRVS 178 (275)
T ss_dssp HH-----HHHHHHHHHHHHHHHTCCSEEEEEEEEECTTTC-CEEEEEEESSCC
T ss_pred HH-----HHHHHHHHHHHHHHcCceECceEEEEEEeCCCC-EEEEEEecCCCC
Confidence 11 346889999999999984 4559999986555 899999996554
No 8
>d2r7ka2 d.142.1.9 (A:124-361) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Methanocaldococcus jannaschii [TaxId: 2190]}
Probab=99.36 E-value=2.5e-12 Score=114.87 Aligned_cols=161 Identities=12% Similarity=0.142 Sum_probs=93.9
Q ss_pred cHHHHHHHHHhccccCCCCCccCCcEEEEecCCCChhHHHHhcCCCCcEEEeeCCCCCCCcceeeEEEeChhhHhcc---
Q 019600 115 NRQSMLQCVADMNLSNSYGKVDVPRQLVIERDASSIPDVVLKAGLTLPLVAKPLVADGSAKSHELSLAYDQYSLKKL--- 191 (338)
Q Consensus 115 dR~~~~~~L~~~~l~~~~~~i~~P~~~~~~~~~~~~~~~l~~~~l~fP~VvKp~~a~Gs~~sh~m~iv~~~~~L~~l--- 191 (338)
||..+-++|.++ |||+|+.+ + . ...++||+|+||.. |+ +|+++.+++|+++|...
T Consensus 1 DK~~~k~~l~~~-------Gip~P~~~--~-~---------~~~i~~PvVVKP~~--g~-gs~Gv~~v~~~~el~~a~~~ 58 (238)
T d2r7ka2 1 ERSLEGKLLREA-------GLRVPKKY--E-S---------PEDIDGTVIVKFPG--AR-GGRGYFIASSTEEFYKKAED 58 (238)
T ss_dssp CHHHHHHHHHHT-------TCCCCCEE--S-S---------GGGCCSCEEEECSC--CC-C---EEEESSHHHHHHHHHH
T ss_pred CHHHHHHHHHHC-------CCCCcccc--c-C---------HhHCCCCEEEEECC--CC-CCCCeEEeCCHHHHHHHHHH
Confidence 788899999975 89999854 1 1 13489999999977 34 68899999999887642
Q ss_pred -----------CCCeEEEecccCCCcEEEEEEECC----EE--EEE-EEecC--CCCCc---ccccCCCceeeecCcccc
Q 019600 192 -----------EPPLVLQEFVNHGGVLFKVYIVGE----AI--KVV-RRFSL--PDVTK---QDLSTSAGVFRFPRVSCA 248 (338)
Q Consensus 192 -----------~~p~vvQeFI~h~g~~~KV~VIGd----~v--~~~-~R~Sl--p~~~~---~~~~~~~g~~~~~~~s~~ 248 (338)
..++++|||| .|..+-+.++.+ .+ .+. .+... ..+.. ..+... +... ..+..
T Consensus 59 ~~~~~~~~~~~~~~v~vEe~i--~G~e~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~ 133 (238)
T d2r7ka2 59 LKKRGILTDEDIANAHIEEYV--VGTNFCIHYFYSPLKDEVELLGMDKRYESNIDGLVRIPAKDQLEM-NINP--SYVIT 133 (238)
T ss_dssp HHHTTSCCHHHHHHCEEEECC--CSEEEEEEEEEETTTTEEEEEEEEEEEEEEHHHHTTSCHHHHHTC-CCCC--CEEEE
T ss_pred HHHHHhhccCCCCcEEEEEee--cCceEEEEEeecccccceEEEeeccCCccEEEEEEEcCHHheecc-Cccc--cCccc
Confidence 2369999999 477777766532 22 222 12110 00000 000000 0000 00000
Q ss_pred cccCCCCCCCccccCCCChHHHHHHHHHHHHHh------CC-cEeEEEEEEeCCCCCeEEEEeccC-CCCC
Q 019600 249 AASADDADLDPCVAELPPRPLLERLAKELRRQL------GL-RLFNLDIIREHGTRDQFYVIDINY-FPGY 311 (338)
Q Consensus 249 ~~~~~~~~~~~~~~~~p~~~~~~~lA~~l~~~L------Gl-~l~GvDvi~~~~~g~~~~ViDVN~-fPg~ 311 (338)
. .....+++. ..+.+++++.+++++| |. .++++|++.+. +| .+||||||. ++|-
T Consensus 134 ~--~~~~~l~~~-----~~~~i~~~~~~i~~~l~~~~~~~~~G~~~ve~~~~~-dg-~~~viEinpR~~G~ 195 (238)
T d2r7ka2 134 G--NIPVVIRES-----LLPQVFEMGDKLVAKAKELVPPGMIGPFCLQSLCNE-NL-ELVVFEMSARVDGG 195 (238)
T ss_dssp E--EEECCCCGG-----GHHHHHHHHHHHHHHHHHHSTTCCCEEEEEEEEECT-TS-CEEEEEEESSBCGG
T ss_pred c--ccCccccHH-----HHHHHHHHHHHHHHHHHHhcccCccccccHhhHhhc-CC-CEEEEEEECCCCCC
Confidence 0 001111111 1356788888888887 53 68889999986 45 689999999 6664
No 9
>d1vkza3 d.142.1.2 (A:94-313) Glycinamide ribonucleotide synthetase (GAR-syn), domain 2 {Thermotoga maritima [TaxId: 2336]}
Probab=99.33 E-value=8.7e-12 Score=109.58 Aligned_cols=88 Identities=14% Similarity=0.184 Sum_probs=63.1
Q ss_pred HHHHHHHHHhccccCCCCCccCCcEEEEecCCCChhHHHHhcCCCCcEEEeeCCCCCCCcceeeEEEeChhhHhcc----
Q 019600 116 RQSMLQCVADMNLSNSYGKVDVPRQLVIERDASSIPDVVLKAGLTLPLVAKPLVADGSAKSHELSLAYDQYSLKKL---- 191 (338)
Q Consensus 116 R~~~~~~L~~~~l~~~~~~i~~P~~~~~~~~~~~~~~~l~~~~l~fP~VvKp~~a~Gs~~sh~m~iv~~~~~L~~l---- 191 (338)
|..|=++|.+. +||+|++.+++ +.+++.+. ...++||+|+||..+ + +|.+|.++.+.+++.+.
T Consensus 2 K~~~K~~l~~~-------gIptp~~~~~~-~~~e~~~~--~~~ig~PvVvKP~~~--~-gs~Gv~~v~~~~el~~a~~~~ 68 (220)
T d1vkza3 2 KVYAKRFMKKY-------GIRTARFEVAE-TPEELREK--IKKFSPPYVIKADGL--A-RGKGVLILDSKEETIEKGSKL 68 (220)
T ss_dssp HHHHHHHHHHT-------TCCCCCEEEES-SHHHHHHH--HTTSCSSEEEEESSC--C-SSCCEEEESSHHHHHHHHHHH
T ss_pred HHHHHHHHHHC-------CCCCCCeEEeC-CHHHHHHH--HHHcCCCEEEEeccc--c-ccccceeeccHHHHHHHhhhh
Confidence 56666777764 89999999885 32233332 357999999999774 3 57899999998776541
Q ss_pred ---------CCCeEEEecccCCCcEEEE--EEECCEEE
Q 019600 192 ---------EPPLVLQEFVNHGGVLFKV--YIVGEAIK 218 (338)
Q Consensus 192 ---------~~p~vvQeFI~h~g~~~KV--~VIGd~v~ 218 (338)
+..+++|||+. |..+-| ++-|+++.
T Consensus 69 ~~~~~~~~~~~~vliEe~i~--g~e~~v~~~~~~~~~~ 104 (220)
T d1vkza3 69 IIGELIKGVKGPVVIDEFLA--GNELSAMAVVNGRNFV 104 (220)
T ss_dssp HHTSSSTTCCSCEEEEECCC--SEEEEEEEEEETTEEE
T ss_pred ccccccccccceEeeecccc--cccceeEEEEeCCEEE
Confidence 34699999995 777755 44466654
No 10
>d1a9xa6 d.142.1.2 (A:677-935) Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains {Escherichia coli [TaxId: 562]}
Probab=99.33 E-value=2.7e-12 Score=117.03 Aligned_cols=156 Identities=16% Similarity=0.310 Sum_probs=95.1
Q ss_pred HHHHhccccCCCCCccCCcEEEEecCCCChhHHHHhcCCCCcEEEeeCCCCCCCcceeeEEEeChhhHhcc---------
Q 019600 121 QCVADMNLSNSYGKVDVPRQLVIERDASSIPDVVLKAGLTLPLVAKPLVADGSAKSHELSLAYDQYSLKKL--------- 191 (338)
Q Consensus 121 ~~L~~~~l~~~~~~i~~P~~~~~~~~~~~~~~~l~~~~l~fP~VvKp~~a~Gs~~sh~m~iv~~~~~L~~l--------- 191 (338)
++|.++ +|++|++..++ +.+++.+. ...++||+|+||..+ . ++.+|.+++++++|...
T Consensus 4 ~~l~~l-------gi~~p~~~~v~-s~~ea~~~--a~~iGfPvivKps~~--~-gG~G~~iv~~~~el~~~~~~a~~~~~ 70 (259)
T d1a9xa6 4 HAVERL-------KLKQPANATVT-AIEMAVEK--AKEIGYPLVVRASYV--L-GGRAMEIVYDEADLRRYFQTAVSVSN 70 (259)
T ss_dssp HHHHHH-------TCCCCCEEECC-SHHHHHHH--HHHHCSSEEEEC----------CEEEECSHHHHHHHHHHCC----
T ss_pred HHHHHC-------CCCCCCceEEC-CHHHHHHH--HHHhCCCEEEEECCC--C-CCCccEeecCHHHHHHHhhhhhcccc
Confidence 566666 89999999995 33333332 345899999999774 3 58899999999998763
Q ss_pred CCCeEEEecccCCCcEEEEEEECC--EEEEEE-EecCCCCCcccccCCCceeeecCcccccccCCCCCCCccccCCCChH
Q 019600 192 EPPLVLQEFVNHGGVLFKVYIVGE--AIKVVR-RFSLPDVTKQDLSTSAGVFRFPRVSCAAASADDADLDPCVAELPPRP 268 (338)
Q Consensus 192 ~~p~vvQeFI~h~g~~~KV~VIGd--~v~~~~-R~Slp~~~~~~~~~~~g~~~~~~~s~~~~~~~~~~~~~~~~~~p~~~ 268 (338)
+.++++++||+ +++.+-|-+++| .+.+.. ...+ .. .|.....+... ..+..+++.. .+
T Consensus 71 ~~~vlie~~i~-~~~Eiev~~i~Dg~~~~i~~i~e~i---~~------~gvhsgds~~~----~p~~~l~~~~-----~~ 131 (259)
T d1a9xa6 71 DAPVLLDHFLD-DAVEVDVDAICDGEMVLIGGIMEHI---EQ------AGVHSGDSACS----LPAYTLSQEI-----QD 131 (259)
T ss_dssp ----EEEBCCT-TCEEEEEEEEECSSCEEEEEEEEES---SC------TTSCGGGCCEE----ESCSSCCHHH-----HH
T ss_pred cchhhhhhhcC-CCeEEEEEEEEeCCcEEEEeeeecc---cc------CcceeEecccc----ccCccCCHHH-----HH
Confidence 46899999997 566777766654 344321 1111 10 11111111000 0122222222 35
Q ss_pred HHHHHHHHHHHHhCC-cEeEEEEEEeCCCCCeEEEEeccCCCCC
Q 019600 269 LLERLAKELRRQLGL-RLFNLDIIREHGTRDQFYVIDINYFPGY 311 (338)
Q Consensus 269 ~~~~lA~~l~~~LGl-~l~GvDvi~~~~~g~~~~ViDVN~fPg~ 311 (338)
.++++|.++++.||. .++++++++++ +++||||+|.-++-
T Consensus 132 ~l~~~a~kia~~l~~~G~~~vef~v~~---~~~y~iEvNpR~~~ 172 (259)
T d1a9xa6 132 VMRQQVQKLAFELQVRGLMNVQFAVKN---NEVYLIEVNPRAAR 172 (259)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEEEECS---SCEEEEEEECSCCT
T ss_pred HHHHHHHHHHHHhhhccceeEEEEEEC---CEEEEEEcccccCC
Confidence 688999999999999 66679999853 36999999998884
No 11
>d1ulza3 d.142.1.2 (A:115-328) Biotin carboxylase (BC), domain 2 {Aquifex aeolicus [TaxId: 63363]}
Probab=99.31 E-value=4.5e-12 Score=111.36 Aligned_cols=159 Identities=14% Similarity=0.237 Sum_probs=96.0
Q ss_pred HHHHHHHHHhccccCCCCCccC-CcEE-EEecCCCChhHHHHhcCCCCcEEEeeCCCCCCCcceeeEEEeChhhHhcc--
Q 019600 116 RQSMLQCVADMNLSNSYGKVDV-PRQL-VIERDASSIPDVVLKAGLTLPLVAKPLVADGSAKSHELSLAYDQYSLKKL-- 191 (338)
Q Consensus 116 R~~~~~~L~~~~l~~~~~~i~~-P~~~-~~~~~~~~~~~~l~~~~l~fP~VvKp~~a~Gs~~sh~m~iv~~~~~L~~l-- 191 (338)
|..|-++|+++ |||+ |.+. +++ +.+++.+.. ..++||+|+||..+ + +|.++.++.+.+++...
T Consensus 1 K~~~k~~~~~a-------GvP~~p~~~~~v~-s~~ea~~~~--~~ig~P~vvKP~~~--~-~s~gv~~v~~~~el~~a~~ 67 (214)
T d1ulza3 1 KARSKEVMKKA-------GVPVVPGSDGVLK-SLEEAKALA--REIGYPVLLKATAG--G-GGRGIRICRNEEELVKNYE 67 (214)
T ss_dssp HHHHHHHHHHT-------TCCBCCBCSSSCC-CHHHHHHHH--HHHCSSEEEEECSS--S-SCCSCEEESSHHHHHHHHH
T ss_pred CHHHHHHHHHc-------CCCcCCCcCCCCC-CHHHHHHHH--HHcCCCEEEeeccc--c-CCccceeeeccHHHHHHHH
Confidence 45677888865 8986 7653 333 222333322 45899999999874 3 68899999999876431
Q ss_pred -----------CCCeEEEecccCCCcEEEEE-EECC-E--EEEEEEe--cCCCCCcccccCCCceeeecCcccccccCCC
Q 019600 192 -----------EPPLVLQEFVNHGGVLFKVY-IVGE-A--IKVVRRF--SLPDVTKQDLSTSAGVFRFPRVSCAAASADD 254 (338)
Q Consensus 192 -----------~~p~vvQeFI~h~g~~~KV~-VIGd-~--v~~~~R~--Slp~~~~~~~~~~~g~~~~~~~s~~~~~~~~ 254 (338)
..++++||||. |..+-+. +++| + +...... +.+.. +....+ . +..
T Consensus 68 ~~~~~~~~~~~~~~viiEe~i~--G~e~~~~~~~~d~~~~~~~i~~~~~~~~~~---------~~~~~~-~------~~~ 129 (214)
T d1ulza3 68 QASREAEKAFGRGDLLLEKFIE--NPKHIEYQVLGDKHGNVIHLGERDCSIQRR---------NQKLVE-I------APS 129 (214)
T ss_dssp HHHHHHHHTTSCCCEEEEECCC--SCEEEEEEEEECTTSCEEEEEEEEEEEEET---------TEEEEE-E------ESC
T ss_pred HHHHHHHHhcCCCCceeheeec--CcceeeEEEEEcCCCeEEEEeccccccCcc---------ccceeE-E------eec
Confidence 56899999995 6555433 3322 1 2222111 11110 000000 0 001
Q ss_pred CCCCccccCCCChHHHHHHHHHHHHHhCCcEe-EEEEEEeCCCCCeEEEEeccCCCCCC
Q 019600 255 ADLDPCVAELPPRPLLERLAKELRRQLGLRLF-NLDIIREHGTRDQFYVIDINYFPGYG 312 (338)
Q Consensus 255 ~~~~~~~~~~p~~~~~~~lA~~l~~~LGl~l~-GvDvi~~~~~g~~~~ViDVN~fPg~~ 312 (338)
...++. ....+++++.++.++||..-. .+|++.+. +| .+|+||+|.-||..
T Consensus 130 ~~~~~e-----~~~~~~~~~~~~~~~lg~~G~~~vef~~~~-dg-~~~~iEin~R~~~~ 181 (214)
T d1ulza3 130 LILTPE-----KREYYGNIVTKAAKEIGYYNAGTMEFIADQ-EG-NLYFIEMNTRIQVE 181 (214)
T ss_dssp SSCCHH-----HHHHHHHHHHHHHHHTTCCEEEEEEEEECT-TC-CEEEEEEECSCCTT
T ss_pred ccccHH-----HHHHHHHHHHHHHHHcCCccceEEEEEECC-CC-CEEEEEecCcCCCc
Confidence 111111 134678999999999998654 49999986 45 58999999999744
No 12
>d2r85a2 d.142.1.9 (A:100-334) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Pyrococcus furiosus [TaxId: 2261]}
Probab=99.29 E-value=1.3e-11 Score=109.19 Aligned_cols=76 Identities=20% Similarity=0.210 Sum_probs=55.5
Q ss_pred cHHHHHHHHHhccccCCCCCccCCcEEEEecCCCChhHHHHhcCCCCcEEEeeCCCCCCCcceeeEEEeChhhHhcc---
Q 019600 115 NRQSMLQCVADMNLSNSYGKVDVPRQLVIERDASSIPDVVLKAGLTLPLVAKPLVADGSAKSHELSLAYDQYSLKKL--- 191 (338)
Q Consensus 115 dR~~~~~~L~~~~l~~~~~~i~~P~~~~~~~~~~~~~~~l~~~~l~fP~VvKp~~a~Gs~~sh~m~iv~~~~~L~~l--- 191 (338)
||..|-++|+++ |||+|+++ + .. ..++||+|+||..+. +|.++.+|.+++++...
T Consensus 1 DK~~~k~~l~~~-------Gip~P~~~----~--~~------~~i~~P~IVKP~~g~---gs~Gv~~v~~~~e~~~~~~~ 58 (235)
T d2r85a2 1 DRNLERKWLKKA-------GIRVPEVY----E--DP------DDIEKPVIVKPHGAK---GGKGYFLAKDPEDFWRKAEK 58 (235)
T ss_dssp SHHHHHHHHHHT-------TCCCCCBC----S--CG------GGCCSCEEEEECC-------TTCEEESSHHHHHHHHHH
T ss_pred CHHHHHHHHHHc-------CCCCchhh----h--CH------HHcCCCEEEEECCCC---CCCCeEEEechHHHHHHHHH
Confidence 788999999975 89999853 1 11 248999999998743 57889999999776542
Q ss_pred ---------CCCeEEEecccCCCcEEEEEEEC
Q 019600 192 ---------EPPLVLQEFVNHGGVLFKVYIVG 214 (338)
Q Consensus 192 ---------~~p~vvQeFI~h~g~~~KV~VIG 214 (338)
..++++|||++ |..+-+-+++
T Consensus 59 ~~~~~~~~~~~~~iiee~i~--G~~~~~~~~~ 88 (235)
T d2r85a2 59 FLGIKRKEDLKNIQIQEYVL--GVPVYPHYFY 88 (235)
T ss_dssp HHCCCSGGGCCSEEEEECCC--CEEEEEEEEE
T ss_pred HHhhhhhCCCcchhHHhhcC--CeEEEEEEee
Confidence 46799999994 7777665553
No 13
>d3etja3 d.142.1.2 (A:79-276) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), domain 2 {Escherichia coli [TaxId: 562]}
Probab=99.26 E-value=5.8e-11 Score=101.44 Aligned_cols=164 Identities=7% Similarity=-0.042 Sum_probs=96.7
Q ss_pred cHHHHHHHHHhccccCCCCCccCCcEEEEecCCCChhHHHHhcCCCCcEEEeeCCCCCCCcceeeEEEeChhhHhc----
Q 019600 115 NRQSMLQCVADMNLSNSYGKVDVPRQLVIERDASSIPDVVLKAGLTLPLVAKPLVADGSAKSHELSLAYDQYSLKK---- 190 (338)
Q Consensus 115 dR~~~~~~L~~~~l~~~~~~i~~P~~~~~~~~~~~~~~~l~~~~l~fP~VvKp~~a~Gs~~sh~m~iv~~~~~L~~---- 190 (338)
||..|-+.|+++ |||||++..+. +.+++.+.+ ..++||+|+||..+.|| +.++.++.+ +++..
T Consensus 1 DK~~~K~~l~~~-------GIptp~~~~v~-s~~d~~~~~--~~ig~P~vvKp~~~~~~--~~~~~v~~~-~~~~~~~~~ 67 (198)
T d3etja3 1 DRLTQKQLFDKL-------HLPTAPWQLLA-ERSEWPAVF--DRLGELAIVKRRTGGYD--GRGQWRLRA-NETEQLPAE 67 (198)
T ss_dssp SHHHHHHHHHHT-------TCCBCCEEEEC-CGGGHHHHH--HHHCSCEEEEESSSCBT--TBSEEEECG-GGGGGSCGG
T ss_pred CHHHHHHHHHHC-------CcCCCCceEEC-CHHHHHHHH--HHcCCCeeeeecccccc--cceeeecch-hhHHHHHhc
Confidence 799999999976 89999999995 444555533 45899999999875433 444445544 44433
Q ss_pred cCCCeEEEecccCCCcEEEEEEECCEEEEEEEecCCCCCcccccCCCceeeecCcccccccCCCCCCCccccCCCChHHH
Q 019600 191 LEPPLVLQEFVNHGGVLFKVYIVGEAIKVVRRFSLPDVTKQDLSTSAGVFRFPRVSCAAASADDADLDPCVAELPPRPLL 270 (338)
Q Consensus 191 l~~p~vvQeFI~h~g~~~KV~VIGd~v~~~~R~Slp~~~~~~~~~~~g~~~~~~~s~~~~~~~~~~~~~~~~~~p~~~~~ 270 (338)
...++++++|+. .+..+-+.++++......... +. .+..+... ......+...++. ....+
T Consensus 68 ~~~~~i~ee~i~-~~~~~~~~~~~~~~~~~~~~~-~~-----------~~~~~~~~-~~~~~~p~~~~~~-----~~~~~ 128 (198)
T d3etja3 68 CYGECIVEQGIN-FSGEVSLVGARGFDGSTVFYP-LT-----------HNLHQDGI-LRTSVAFPQANAQ-----QQARA 128 (198)
T ss_dssp GTTTEEEEECCC-CSEEEEEEEEECTTSCEEECC-CE-----------EEEEETTE-EEEEEECSSCCHH-----HHHHH
T ss_pred cCceEEEeeecc-ccccccceeeecccceeeeec-ee-----------eccccccc-eeeeeeccccccc-----hhhhh
Confidence 367899999996 344444444422100000000 00 00000000 0000011111111 13456
Q ss_pred HHHHHHHHHHhCCcEe-EEEEEEeCCCCCeEEEEeccCCCCCCC
Q 019600 271 ERLAKELRRQLGLRLF-NLDIIREHGTRDQFYVIDINYFPGYGK 313 (338)
Q Consensus 271 ~~lA~~l~~~LGl~l~-GvDvi~~~~~g~~~~ViDVN~fPg~~g 313 (338)
.+++.++.++++..-. .+|++.++ +.+||+|||.-|+=.|
T Consensus 129 ~~~~~~~~~~l~~~g~~~~~~~~~~---~~~~v~Evn~Rp~~~g 169 (198)
T d3etja3 129 EEMLSAIMQELGYVGVMAMECFVTP---QGLLINELAPRVHNSG 169 (198)
T ss_dssp HHHHHHHHHHHTCCEEEEEEEEEET---TEEEEEEEESSCCGGG
T ss_pred hhhhhHHHHhhhhcccchhheeecC---CcEEEEEEECCccccc
Confidence 7889999998887654 49999875 3589999999997543
No 14
>d1w96a3 d.142.1.2 (A:184-450) Acetyl-CoA carboxylase, BC-M subdomain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.22 E-value=1.8e-11 Score=111.42 Aligned_cols=131 Identities=12% Similarity=0.172 Sum_probs=81.8
Q ss_pred cCCCCcEEEeeCCCCCCCcceeeEEEeChhhHhcc---------CCCeEEEecccCCCcEEEEEEECC----EEEEEEEe
Q 019600 157 AGLTLPLVAKPLVADGSAKSHELSLAYDQYSLKKL---------EPPLVLQEFVNHGGVLFKVYIVGE----AIKVVRRF 223 (338)
Q Consensus 157 ~~l~fP~VvKp~~a~Gs~~sh~m~iv~~~~~L~~l---------~~p~vvQeFI~h~g~~~KV~VIGd----~v~~~~R~ 223 (338)
.+++||+|+||..++ +|.+|.+|.++++|.++ +.++++||||. +...+-+-++++ .+.+..+.
T Consensus 60 ~~igfPvvVKP~~~~---gs~Gv~iv~~~~el~~a~~~a~~~s~~~~vlVEe~I~-G~~~~~~~~~~~~~~~~v~~~~~~ 135 (267)
T d1w96a3 60 KRIGFPVMIKASEGG---GGKGIRQVEREEDFIALYHQAANEIPGSPIFIMKLAG-RARHLEVQLLADQYGTNISLFGRD 135 (267)
T ss_dssp HHHCSSEEEEETTCC---TTTTEEEECSHHHHHHHHHHHHHHSTTCCEEEEECCC-SCEEEEEEEEECTTSCEEEEEEEE
T ss_pred HhcCCCEEEEeeccc---CCeeEEeecccchhhhhhhhhhhhcccchhhhhhhcc-chhhhhhhheeccCcceeeecccc
Confidence 468999999998743 57899999999998753 67899999995 223333333433 22222222
Q ss_pred cCCCCCcccccCCCceeeecCcccccccCCCCCCCccccCCCChHHHHHHHHHHHHHhCCcEeE-EEEEEeCCCCCeEEE
Q 019600 224 SLPDVTKQDLSTSAGVFRFPRVSCAAASADDADLDPCVAELPPRPLLERLAKELRRQLGLRLFN-LDIIREHGTRDQFYV 302 (338)
Q Consensus 224 Slp~~~~~~~~~~~g~~~~~~~s~~~~~~~~~~~~~~~~~~p~~~~~~~lA~~l~~~LGl~l~G-vDvi~~~~~g~~~~V 302 (338)
....-. .... .. ......++.. ..+.+.++|.++.+.+|+.-.+ +|++++.++| ++||
T Consensus 136 ~~~~~~---------~~~~--~~----~~~~~~~~~~-----~~~~~~~~a~~~~~~lg~~g~~~vd~~~~~~~g-~~yv 194 (267)
T d1w96a3 136 CSVQRR---------HQKI--IE----EAPVTIAKAE-----TFHEMEKAAVRLGKLVGYVSAGTVEYLYSHDDG-KFYF 194 (267)
T ss_dssp EEEEET---------TEEE--EE----EESCCSSCHH-----HHHHHHHHHHHHHHHHTCCEEEEEEEEECTTTC-CEEE
T ss_pred cccccc---------cccc--cc----eeecccCchH-----HHHHHHHHHHHHHHHhCCccccceeeeeeCCCC-cEEE
Confidence 110000 0000 00 0001111111 1346788999999999988654 9999986556 7999
Q ss_pred EeccCCCCCC
Q 019600 303 IDINYFPGYG 312 (338)
Q Consensus 303 iDVN~fPg~~ 312 (338)
||||.-+|-.
T Consensus 195 iEiNpR~~~~ 204 (267)
T d1w96a3 195 LELNPRLQVE 204 (267)
T ss_dssp EEEECSCCTT
T ss_pred EEeccccccc
Confidence 9999998743
No 15
>d1kjqa3 d.142.1.2 (A:113-318) Glycinamide ribonucleotide transformylase PurT, domain 2 {Escherichia coli [TaxId: 562]}
Probab=99.16 E-value=1.1e-10 Score=100.31 Aligned_cols=148 Identities=11% Similarity=0.128 Sum_probs=87.8
Q ss_pred CCccCCcEEEEecCCCChhHHHHhcCCCCcEEEeeCCCCCCCcceeeEEEeChhhHhcc-----------CCCeEEEecc
Q 019600 133 GKVDVPRQLVIERDASSIPDVVLKAGLTLPLVAKPLVADGSAKSHELSLAYDQYSLKKL-----------EPPLVLQEFV 201 (338)
Q Consensus 133 ~~i~~P~~~~~~~~~~~~~~~l~~~~l~fP~VvKp~~a~Gs~~sh~m~iv~~~~~L~~l-----------~~p~vvQeFI 201 (338)
.|||+|++..+. +.+++.+.+ ..++||+|+||..+ + +|.++.++.+.++|.++ ...++.|+|+
T Consensus 13 ~Gip~p~~~~v~-s~~dl~~~~--~~ig~PvVvKP~~g--~-gs~gv~~v~~~~el~~a~~~~~~~~~~~~~~~~~~~~~ 86 (206)
T d1kjqa3 13 LQLPTSTYRFAD-SESLFREAV--ADIGYPCIVKPVMS--S-SGKGQTFIRSAEQLAQAWKYAQQGGRAGAGRVIVEGVV 86 (206)
T ss_dssp SCCCBCCEEEES-SHHHHHHHH--HHHCSSEEEEESCC------CCCEEECSGGGHHHHHHHHHHHSGGGCCCEEEEECC
T ss_pred CCCCCCCCeEEC-CHHHHHHHH--HHhCCCEEEeeccC--C-ccCCceEEcCHHHHHHHHHHHHhhcccCcceeeeeecc
Confidence 499999999995 333444433 45899999999874 3 68899999999887753 4567888888
Q ss_pred cCCCcE-EEEEEECCEEEEE---EEecCCCCCcccccCCCceeeecCcccccccCCCCCCCccccCCCChHHHHHHHHHH
Q 019600 202 NHGGVL-FKVYIVGEAIKVV---RRFSLPDVTKQDLSTSAGVFRFPRVSCAAASADDADLDPCVAELPPRPLLERLAKEL 277 (338)
Q Consensus 202 ~h~g~~-~KV~VIGd~v~~~---~R~Slp~~~~~~~~~~~g~~~~~~~s~~~~~~~~~~~~~~~~~~p~~~~~~~lA~~l 277 (338)
...... +-++.-++..... .+....+ .... . ......++. ....+.+++..+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~-~--------~~~~~~~~~-----~~~~~~~~~~~~ 142 (206)
T d1kjqa3 87 KFDFEITLLTVSAVDGVHFCAPVGHRQEDG----------DYRE-S--------WQPQQMSPL-----ALERAQEIARKV 142 (206)
T ss_dssp CCSEEEEEEEEEETTEEEECCCEEEEEETT----------EEEE-E--------EECCCCCHH-----HHHHHHHHHHHH
T ss_pred ccceeeeeeeeecCCCceeeccceeeeccC----------ccce-e--------eccccCCHH-----HHHHHHHHHHhh
Confidence 643221 1222223222211 0000000 0000 0 001111111 134578888999
Q ss_pred HHHhCCcE-eEEEEEEeCCCCCeEEEEeccCCCCCCC
Q 019600 278 RRQLGLRL-FNLDIIREHGTRDQFYVIDINYFPGYGK 313 (338)
Q Consensus 278 ~~~LGl~l-~GvDvi~~~~~g~~~~ViDVN~fPg~~g 313 (338)
.+.++..- +.+|+..++ +.+||+|||.-||-.+
T Consensus 143 ~~~~~~~g~~~~e~~~~~---~~~~viEin~R~~~~~ 176 (206)
T d1kjqa3 143 VLALGGYGLFGVELFVCG---DEVIFSEVSPRPHDTG 176 (206)
T ss_dssp HHHHCSSEEEEEEEEEET---TEEEEEEEESSCCGGG
T ss_pred hhhhhceeeecccccccc---CCceEEEeecCccccc
Confidence 99998875 569999875 2589999999998654
No 16
>d2j9ga3 d.142.1.2 (A:115-330) Biotin carboxylase (BC), domain 2 {Escherichia coli [TaxId: 562]}
Probab=99.15 E-value=7.6e-11 Score=103.97 Aligned_cols=160 Identities=13% Similarity=0.214 Sum_probs=97.0
Q ss_pred cHHHHHHHHHhccccCCCCCcc-CCcE--EEEecCCCChhHHHHhcCCCCcEEEeeCCCCCCCcceeeEEEeChhhHhcc
Q 019600 115 NRQSMLQCVADMNLSNSYGKVD-VPRQ--LVIERDASSIPDVVLKAGLTLPLVAKPLVADGSAKSHELSLAYDQYSLKKL 191 (338)
Q Consensus 115 dR~~~~~~L~~~~l~~~~~~i~-~P~~--~~~~~~~~~~~~~l~~~~l~fP~VvKp~~a~Gs~~sh~m~iv~~~~~L~~l 191 (338)
||..+-++++++ ||| +|-+ .+++ +.+++.+ ....++||+|+||..+ + +|++|.++++.++|...
T Consensus 1 dK~~~~~~~~~~-------GvP~vp~~~~~~~~-s~dea~~--~a~~iG~PvivKp~~~--~-ggrGv~~v~~~~el~~a 67 (216)
T d2j9ga3 1 DKVSAIAAMKKA-------GVPCVPGSDGPLGD-DMDKNRA--IAKRIGYPVIIKASGG--G-GGRGMRVVRGDAELAQS 67 (216)
T ss_dssp SHHHHHHHHHHH-------TCCBCCBCSSCCCS-CHHHHHH--HHHHHCSSEEEEEEEE--E-TTEEEEEECSHHHHHHH
T ss_pred CHHHHHHHHHHc-------CcCCCCCCCCCCCC-CHHHHHH--HHHHcCCCEEEecccc--c-CCceeEeecchhHHHHH
Confidence 788888999876 788 4633 2222 2222222 2346899999999874 3 68999999999887652
Q ss_pred -------------CCCeEEEecccCCCcEEEEEEECC---E-EEEEEEe-cCCCCCcccccCCCceeeecCcccccccCC
Q 019600 192 -------------EPPLVLQEFVNHGGVLFKVYIVGE---A-IKVVRRF-SLPDVTKQDLSTSAGVFRFPRVSCAAASAD 253 (338)
Q Consensus 192 -------------~~p~vvQeFI~h~g~~~KV~VIGd---~-v~~~~R~-Slp~~~~~~~~~~~g~~~~~~~s~~~~~~~ 253 (338)
+.++++++||+. ...+-+-+++| + +....|. +... + +. .....+.
T Consensus 68 ~~~~~~ea~~~~~~~~vlvE~~i~g-~~~~~~~i~~dg~~~~~~~~~~~~~~~~------------~--~~--~~~~~~P 130 (216)
T d2j9ga3 68 ISMTRAEAKAAFSNDMVYMEKYLEN-PRHVEIQVLADGQGNAIYLAERDCSMQR------------R--HQ--KVVEEAP 130 (216)
T ss_dssp HHHHHHHTC--CCCCCEEEEECCSS-CEEEEEEEEEESSSCEEEEEEEEEEEEE------------T--TE--EEEEEES
T ss_pred HHHHHHHHHHhcCCCceEeeeeecC-cccceeEEEEcCCCCeeeccccccCccc------------c--cC--CeEEecc
Confidence 468999999962 23444444433 1 2222222 1100 0 00 0000000
Q ss_pred CCCCCccccCCCChHHHHHHHHHHHHHhCCcEeE-EEEEEeCCCCCeEEEEeccCCCCCC
Q 019600 254 DADLDPCVAELPPRPLLERLAKELRRQLGLRLFN-LDIIREHGTRDQFYVIDINYFPGYG 312 (338)
Q Consensus 254 ~~~~~~~~~~~p~~~~~~~lA~~l~~~LGl~l~G-vDvi~~~~~g~~~~ViDVN~fPg~~ 312 (338)
....++. ..+.+.+++.++.+.+|+.-.+ +|++.++ + ++||||||.-|+-.
T Consensus 131 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~G~~~~e~~~~~--~-~~~viEvnpR~~~~ 182 (216)
T d2j9ga3 131 APGITPE-----LRRYIGERCAKACVDIGYRGAGTFEFLFEN--G-EFYFIEMNTRIQVE 182 (216)
T ss_dssp CTTCCHH-----HHHHHHHHHHHHHHHTTCEEEEEEEEEEET--T-EEEEEEEECSCCTT
T ss_pred Cccccch-----hhhhhHHHHHHHHHHcCccCcceeEeEecC--C-eEEEEeecCccccc
Confidence 1111111 1345788999999999977554 9999974 3 69999999999743
No 17
>d1gsoa3 d.142.1.2 (A:104-327) Glycinamide ribonucleotide synthetase (GAR-syn), domain 2 {Escherichia coli [TaxId: 562]}
Probab=99.05 E-value=6.7e-10 Score=98.72 Aligned_cols=186 Identities=13% Similarity=0.095 Sum_probs=103.8
Q ss_pred HHHHHHHHHhccccCCCCCccCCcEEEEecCCCChhHHHHhcCCCCcEEEeeCCCCCCCcceeeEEEeChhhHhcc----
Q 019600 116 RQSMLQCVADMNLSNSYGKVDVPRQLVIERDASSIPDVVLKAGLTLPLVAKPLVADGSAKSHELSLAYDQYSLKKL---- 191 (338)
Q Consensus 116 R~~~~~~L~~~~l~~~~~~i~~P~~~~~~~~~~~~~~~l~~~~l~fP~VvKp~~a~Gs~~sh~m~iv~~~~~L~~l---- 191 (338)
|..+-+++.++ +||||++..++ +.+++.+.+. .++||+|+||.. .++|.+|.++.+.+++.+.
T Consensus 2 K~f~K~~~~~~-------~IPt~~~~~~~-~~~ea~~~~~--~~~~P~VvK~~~---~~~gkGv~i~~~~~e~~~a~~~~ 68 (224)
T d1gsoa3 2 KAFTKDFLARH-------KIPTAEYQNFT-EVEPALAYLR--EKGAPIVIKADG---LAAGKGVIVAMTLEEAEAAVHDM 68 (224)
T ss_dssp HHHHHHHHHHT-------TCCBCCEEEES-SSSHHHHHHH--HHCSSEEEEC---------CCEEEESSHHHHHHHHTTT
T ss_pred HHHHHHHHHHc-------CCCCCCceEeC-CHHHHHHHHH--HcCCCEEEEeCC---cccccceeeehhHHHHHHHHHHH
Confidence 44555667754 89999999985 3444555443 378999999855 3368899999999776642
Q ss_pred ---------CCCeEEEecccCCCcEEEEEEE--CCEEEEE--EEecCCCCCcccccCCCceeeecCcccccccCCCCC-C
Q 019600 192 ---------EPPLVLQEFVNHGGVLFKVYIV--GEAIKVV--RRFSLPDVTKQDLSTSAGVFRFPRVSCAAASADDAD-L 257 (338)
Q Consensus 192 ---------~~p~vvQeFI~h~g~~~KV~VI--Gd~v~~~--~R~Slp~~~~~~~~~~~g~~~~~~~s~~~~~~~~~~-~ 257 (338)
...+++|||+ .|..+-|+++ |+.+... .+.--+ +-.++...+.| . .++.. +.. .
T Consensus 69 ~~~~~~~~~~~~vliEefl--~G~E~s~~~i~dg~~~~~~~~~~d~kr-~~d~~~gp~tg-------g-mg~~~-P~p~~ 136 (224)
T d1gsoa3 69 LAGNAFGDAGHRIVIEEFL--DGEEASFIVMVDGEHVLPMATSQDHKR-VGDKDTGPNTG-------G-MGAYS-PAPVV 136 (224)
T ss_dssp TCSCCTTCTTCCEEEEECC--CEEEEEEEEEEESSCEEEEEEEEEEEE-EETTTEEEEEE-------E-EEEEE-SCTTC
T ss_pred HhcccccccCceEEeeccc--ccccceeEEEeccCceEeeeccccccc-ccccccccccc-------c-ccccC-CCchh
Confidence 2469999999 5999999888 5554322 111000 00000000000 0 01100 111 0
Q ss_pred CccccCCCChH---HHHHHHHHHHHHhCCcEeE---EEEEEeCCCCCeEEEEeccCCCCCCCcccc----hHHHHHHHHH
Q 019600 258 DPCVAELPPRP---LLERLAKELRRQLGLRLFN---LDIIREHGTRDQFYVIDINYFPGYGKMPEY----EHIFTDFLLS 327 (338)
Q Consensus 258 ~~~~~~~p~~~---~~~~lA~~l~~~LGl~l~G---vDvi~~~~~g~~~~ViDVN~fPg~~gv~~~----~~~l~~~l~~ 327 (338)
++. ++ .+ .+.+.+.+..++.|+.+-| ++++++. +| ++||||+|.-+|--..... ..-|.+.+.+
T Consensus 137 ~~~---l~-~~~~~~i~~~~~~~~~~~g~~~~G~l~~~~mit~-~G-~p~vlE~N~R~Gdpe~~~il~~l~~dl~e~~~~ 210 (224)
T d1gsoa3 137 TDD---VH-QRTMERIIWPTVKGMAAEGNTYTGFLYAGLMIDK-QG-NPKVIEFNCRFGDLETQPIMLRMKSDLVELCLA 210 (224)
T ss_dssp CHH---HH-HHHHHHTHHHHHHHHHHTTCCCEEEEEEEEEEET-TC-CEEEEEEESSCCTTTHHHHHHHBCSCHHHHHHH
T ss_pred hHH---HH-HHHHHHHHHHHHHHHHhcCceeeeeeccceeeee-CC-CEEEEEEecCCCCCcceeehhhhcCCHHHHHHH
Confidence 000 00 11 1233446667888887665 6888886 35 5899999999863322211 1235666666
Q ss_pred HHHhh
Q 019600 328 LTQSR 332 (338)
Q Consensus 328 ~i~~~ 332 (338)
.+.++
T Consensus 211 ~~~g~ 215 (224)
T d1gsoa3 211 ACESK 215 (224)
T ss_dssp HHTTC
T ss_pred HHhCC
Confidence 66554
No 18
>d1uc8a1 c.30.1.6 (A:1-88) Lysine biosynthesis enzyme LysX, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=98.19 E-value=1.1e-06 Score=66.32 Aligned_cols=68 Identities=10% Similarity=0.082 Sum_probs=54.1
Q ss_pred chHHHhhhhhcceEEEEeeCCCCCC---cCC----CccEEEEccCch-hHHHHHHHHHHhCCCceeeChHHHHHHhcc
Q 019600 46 QPKLEGLARNKGILFVAIDQNRPLS---DQG----PFDIVLHKLTGK-EWRQILEEYRQTHPEVTVLDPPYAIQHLHN 115 (338)
Q Consensus 46 ~~~l~~~~~~~gi~~~~id~~~~l~---~qg----~~DvilhK~~~~-~~~~~l~~~~~~~p~v~ViDp~~ai~~l~d 115 (338)
-.+|+++++++|+++..||+.++.. .++ .+|++|.|.... ..++.+..|... |++|+|++++|++|.|
T Consensus 13 Ek~L~~a~~~rG~~~~~id~~~~~~~l~~~~~~~~~~D~Vi~R~~s~~~~~~v~~~lE~~--Gv~v~Ns~~aI~~c~D 88 (88)
T d1uc8a1 13 ERMLFERAEALGLPYKKVYVPALPMVLGERPKELEGVTVALERCVSQSRGLAAARYLTAL--GIPVVNRPEVIEACGD 88 (88)
T ss_dssp HHHHHHHHHHHTCCEEEEEGGGCCEETTBCCGGGTTCCEEEECCSSHHHHHHHHHHHHHT--TCCEESCHHHHHHHHB
T ss_pred HHHHHHHHHHCCCeEEEEehhhcEEEccCCCCccCCCCEEEEeccccchHHHHHHHHHHC--CCcEeccHHHHHhhCC
Confidence 3459999999999999999988333 332 479999998764 345666666665 9999999999999976
No 19
>d2nu7b2 d.142.1.4 (B:1-238) Succinyl-CoA synthetase, beta-chain, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=93.44 E-value=0.043 Score=47.26 Aligned_cols=63 Identities=14% Similarity=0.140 Sum_probs=41.7
Q ss_pred HHHHHHHHhccccCCCCCccCCcEEEEecCCCChhHHHHhcCCC-CcEEEeeC-CCCCCCcceeeEEEeChhhHh
Q 019600 117 QSMLQCVADMNLSNSYGKVDVPRQLVIERDASSIPDVVLKAGLT-LPLVAKPL-VADGSAKSHELSLAYDQYSLK 189 (338)
Q Consensus 117 ~~~~~~L~~~~l~~~~~~i~~P~~~~~~~~~~~~~~~l~~~~l~-fP~VvKp~-~a~Gs~~sh~m~iv~~~~~L~ 189 (338)
+..-++|++. |||+|++.++. +.+++.+ ....++ ||+|+|.. ..+|...+.++.+..+.++..
T Consensus 6 ~eaK~lL~~y-------GIpvp~~~~a~-s~~ea~~--~a~~iG~~pvVlKaq~~~~hk~~~GGV~~~~~~~e~~ 70 (238)
T d2nu7b2 6 YQAKQLFARY-------GLPAPVGYACT-TPREAEE--AASKIGAGPWVVKCQVHAGGRGKAGGVKVVNSKEDIR 70 (238)
T ss_dssp HHHHHHHHHT-------TCCCCCEEEES-SHHHHHH--HHHHHCSSCEEEEECCSSSCTTTTTCEEEECSHHHHH
T ss_pred HHHHHHHHHc-------CCCCCCceEEC-CHHHHHH--HHHHhCCCcEEEEEeecccccccceEEEeccccHHHH
Confidence 3455677764 89999999985 3323333 234577 59999962 234555677899988886643
No 20
>d1eucb2 d.142.1.4 (B:0-245) Succinyl-CoA synthetase, beta-chain, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=92.88 E-value=0.11 Score=44.54 Aligned_cols=89 Identities=17% Similarity=0.180 Sum_probs=54.5
Q ss_pred HHHHHHHHHhccccCCCCCccCCcEEEEecCCCChhHHHHhcCCCC-cEEEeeCCCCCCC--------cceeeEEEeChh
Q 019600 116 RQSMLQCVADMNLSNSYGKVDVPRQLVIERDASSIPDVVLKAGLTL-PLVAKPLVADGSA--------KSHELSLAYDQY 186 (338)
Q Consensus 116 R~~~~~~L~~~~l~~~~~~i~~P~~~~~~~~~~~~~~~l~~~~l~f-P~VvKp~~a~Gs~--------~sh~m~iv~~~~ 186 (338)
=+..-++|++ .|||+|++.++. +.+++.+ ....++| |+|+|+....|.. ..-++.++.+.+
T Consensus 6 E~eaK~lL~~-------yGIpvp~~~~a~-s~~ea~~--~a~~ig~~~vVlK~qv~~g~r~~~~~~k~~~GgV~~~~~~e 75 (246)
T d1eucb2 6 EYQSKKLMSD-------NGVKVQRFFVAD-TANEALE--AAKRLNAKEIVLKAQILAGGRGKGVFSSGLKGGVHLTKDPE 75 (246)
T ss_dssp HHHHHHHHHT-------TTCCCCCEEEES-SHHHHHH--HHHHHTCSSEEEEECCSSSCCTTCEETTSCBCSEEEESCHH
T ss_pred HHHHHHHHHH-------cCCCCCCeeEEC-CHHHHHH--HHHHhCCCeEEEEEeeccccccccccccCCcceEEEecChh
Confidence 3455677775 499999999985 3323333 2235785 8999985443221 123566788887
Q ss_pred hHhcc------------C--------CCeEEEecccCCCcEEEEEEECC
Q 019600 187 SLKKL------------E--------PPLVLQEFVNHGGVLFKVYIVGE 215 (338)
Q Consensus 187 ~L~~l------------~--------~p~vvQeFI~h~g~~~KV~VIGd 215 (338)
++.+. . .-+++|+.+++ ++++=+.+..|
T Consensus 76 e~~~~a~~~~~~~~~~~~~~~~~~~v~~vlve~~~~~-~~E~~vg~~~D 123 (246)
T d1eucb2 76 VVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDI-SRETYLAILMD 123 (246)
T ss_dssp HHHHHHHTTTTSEEECTTSCTTCEECCCEEEEECCCC-SEEEEEEEEEE
T ss_pred HHHHHhhhhhcchhhhhhccccccccccceehhcccc-cceeeeeeeec
Confidence 76531 0 13688888874 55665555544
No 21
>d1gsaa1 c.30.1.3 (A:1-122) Prokaryotic glutathione synthetase, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=90.97 E-value=0.13 Score=39.74 Aligned_cols=64 Identities=11% Similarity=0.181 Sum_probs=41.8
Q ss_pred HHhhhhhcceEEEEeeCCCCCCcC------------------------------CCccEEEEccCch---h--HHHHHHH
Q 019600 49 LEGLARNKGILFVAIDQNRPLSDQ------------------------------GPFDIVLHKLTGK---E--WRQILEE 93 (338)
Q Consensus 49 l~~~~~~~gi~~~~id~~~~l~~q------------------------------g~~DvilhK~~~~---~--~~~~l~~ 93 (338)
|..+|.++|+++-..+++.-.-.+ ..||+|+.|--.. . ..-++-+
T Consensus 24 Lm~eAq~Rg~~v~~~~~~dL~~~~~~v~a~~~~v~~~~~~~~~~~~~~~~~~~L~~fd~i~mRkDPPfd~~Yl~~T~lL~ 103 (122)
T d1gsaa1 24 MLLEAQRRGYELHYMEMGDLYLINGEARAHTRTLNVKQNYEEWFSFVGEQDLPLADLDVILMRKDPPFDTEFIYATYILE 103 (122)
T ss_dssp HHHHHHHTTCEEEEECGGGEEEETTEEEEEEEEEEECSCSSCCEEEEEEEEEEGGGSSEEEECCCCCCCHHHHHHHHHHH
T ss_pred HHHHHHHCCCeEEEEecCceEEeCCcEEEEEeeccccccCccceeeeeeEEcccccccEEEEecCCCCcHHHHHHHHHHH
Confidence 678888899888777776511111 2689999886432 1 1123333
Q ss_pred HHHhCCCceeeChHHHHHHh
Q 019600 94 YRQTHPEVTVLDPPYAIQHL 113 (338)
Q Consensus 94 ~~~~~p~v~ViDp~~ai~~l 113 (338)
.++. -|+.|||+|.+++-|
T Consensus 104 ~~~~-~g~~ViN~P~~lRnc 122 (122)
T d1gsaa1 104 RAEE-KGTLIVNKPQSLRDC 122 (122)
T ss_dssp HHHH-TTCEEESCHHHHHHC
T ss_pred hhhh-cCCEEEcCcHHhcCC
Confidence 3432 489999999999876
No 22
>d2pbza2 d.142.1.9 (A:100-312) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Thermococcus kodakaraensis [TaxId: 311400]}
Probab=70.38 E-value=0.95 Score=37.85 Aligned_cols=59 Identities=14% Similarity=0.178 Sum_probs=28.3
Q ss_pred CccCCcEEEEecCCCChhHHHHhcCCCCcEEEeeCCCCCCCcceeeEEEeChhhHhcc---CCCeEEEecccCCCcEE
Q 019600 134 KVDVPRQLVIERDASSIPDVVLKAGLTLPLVAKPLVADGSAKSHELSLAYDQYSLKKL---EPPLVLQEFVNHGGVLF 208 (338)
Q Consensus 134 ~i~~P~~~~~~~~~~~~~~~l~~~~l~fP~VvKp~~a~Gs~~sh~m~iv~~~~~L~~l---~~p~vvQeFI~h~g~~~ 208 (338)
||+.|+.. + ++++ +..-|+|||- .|..++.+-.++.+.+....+ ...+.+||||- |.-|
T Consensus 11 Gip~Pk~~--~--Pedi-------~~d~~ViVK~---~gAkggrGyFia~~~e~~~~~~~~~e~~~IeEyv~--G~~~ 72 (213)
T d2pbza2 11 GIPRVEVV--E--PEDA-------KPDELYFVRI---EGPRGGSGHFIVEGSELEERLSTLEEPYRVERFIP--GVYL 72 (213)
T ss_dssp TCCBCCBC--C--SCCC-------CSSCCEEEEC---CC------------EECSCCCC----CCEEEECCC--SCEE
T ss_pred CCCCCccc--C--cccc-------CCCceEEEEe---ccccCcceEEEEcCHHHHHhhhhcccceEEEEEec--ccee
Confidence 79999732 2 3222 2344999995 344567788888887654443 55689999995 5433
No 23
>d1dxha1 c.78.1.1 (A:1-150) Ornithine transcarbamoylase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=69.00 E-value=3.6 Score=32.16 Aligned_cols=72 Identities=17% Similarity=0.148 Sum_probs=47.7
Q ss_pred CceEEEEEEecccc-cccccchHHHhhhhhcceEEEEeeCCCCCCcCCC------------ccEEEEccCchhHHHHHHH
Q 019600 27 SKLVVVGYALTSKK-TKSFLQPKLEGLARNKGILFVAIDQNRPLSDQGP------------FDIVLHKLTGKEWRQILEE 93 (338)
Q Consensus 27 ~~~~~VGy~l~~kK-~~~~~~~~l~~~~~~~gi~~~~id~~~~l~~qg~------------~DvilhK~~~~~~~~~l~~ 93 (338)
-...+|+..+.+.= +..+ +|..++.+.|...+.+|.+..-...|+ +|+|+.|-........+.+
T Consensus 43 L~~K~v~~lF~epStRTR~---SFe~A~~~LG~~~i~l~~~~s~~~kgEs~~Dt~~~ls~~~d~iviR~~~~~~~~~~~~ 119 (150)
T d1dxha1 43 LKRKNIALIFEKTSTRTRC---AFEVAAYDQGANVTYIDPNSSQIGHKESMKDTARVLGRMYDAIEYRGFKQEIVEELAK 119 (150)
T ss_dssp CTTCEEEEEESSCCHHHHH---HHHHHHHHTTCEEEEECTTTCCBTTTBCHHHHHHHHHHHCSEEEEECSCHHHHHHHHH
T ss_pred CCCCEEEEEEcCCCCceeE---EeeeehhhcccccccccccccccccCcchhhhhhhhhcccceEEEEecchhHHHHHHH
Confidence 34678888887732 2222 277899999999999998764433332 6888888776533333333
Q ss_pred HHHhCCCceeeC
Q 019600 94 YRQTHPEVTVLD 105 (338)
Q Consensus 94 ~~~~~p~v~ViD 105 (338)
+-.+||||
T Consensus 120 ----~~~iPVIN 127 (150)
T d1dxha1 120 ----FAGVPVFN 127 (150)
T ss_dssp ----HSSSCEEE
T ss_pred ----hcCCcEEe
Confidence 34678887
No 24
>d1duvg1 c.78.1.1 (G:1-150) Ornithine transcarbamoylase {Escherichia coli [TaxId: 562]}
Probab=68.67 E-value=4.8 Score=31.39 Aligned_cols=72 Identities=17% Similarity=0.188 Sum_probs=47.5
Q ss_pred ceEEEEEEecccccccccchHHHhhhhhcceEEEEeeCCCCCCcCC------------CccEEEEccCchhHHHHHHHHH
Q 019600 28 KLVVVGYALTSKKTKSFLQPKLEGLARNKGILFVAIDQNRPLSDQG------------PFDIVLHKLTGKEWRQILEEYR 95 (338)
Q Consensus 28 ~~~~VGy~l~~kK~~~~~~~~l~~~~~~~gi~~~~id~~~~l~~qg------------~~DvilhK~~~~~~~~~l~~~~ 95 (338)
...+|+..+.+.=.+- .-+|..+|.+.|..++.+|....-...| =+|+|+.|...+...+.+.++.
T Consensus 43 ~gk~v~~lF~epSTRT--R~SFe~A~~~LG~~~i~~~~~~ss~~kgEs~~Dt~~~ls~~~d~iv~R~~~~~~~~~~~~~~ 120 (150)
T d1duvg1 43 TGKNIALIFEKDSTRT--RCSFEVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYRGYGQEIVETLAEYA 120 (150)
T ss_dssp TTCEEEEEESSCCSHH--HHHHHHHHHHTTCEEEEECSSSSCBTTTBCHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHH
T ss_pred CCcEEEEEecCCCchh--hhhhhhhheecCcceeeccccccccccccchHHHHHHHHhcCceEEEecccccchhhccccc
Confidence 4567888777622111 1237889999999999998866433333 3799999988754444444443
Q ss_pred HhCCCceeeC
Q 019600 96 QTHPEVTVLD 105 (338)
Q Consensus 96 ~~~p~v~ViD 105 (338)
.++|||
T Consensus 121 ----~~pviN 126 (150)
T d1duvg1 121 ----SVPVWN 126 (150)
T ss_dssp ----SSCEEE
T ss_pred ----ceeEEc
Confidence 678888
No 25
>d2io8a3 d.142.1.8 (A:201-378,A:497-615) Glutathionylspermidine synthase, synthetase domain {Escherichia coli [TaxId: 562]}
Probab=66.44 E-value=7.6 Score=33.87 Aligned_cols=61 Identities=16% Similarity=0.125 Sum_probs=43.6
Q ss_pred cEEEeeCCCCCCCcceeeEEEeChhhHh-c-----cCCCeEEEecccCC---Cc--EEEEEEECCEEEEE-EEecC
Q 019600 162 PLVAKPLVADGSAKSHELSLAYDQYSLK-K-----LEPPLVLQEFVNHG---GV--LFKVYIVGEAIKVV-RRFSL 225 (338)
Q Consensus 162 P~VvKp~~a~Gs~~sh~m~iv~~~~~L~-~-----l~~p~vvQeFI~h~---g~--~~KV~VIGd~v~~~-~R~Sl 225 (338)
+.|.||+.+ - .+.+|.|+....... . -+.+.|+|+|++=+ |. .+=+|+|||+.... .|.+.
T Consensus 211 ~yV~KPi~g--R-EG~nV~i~~~~~~~~~~~~g~Y~~~~~IyQ~~~~Lp~~~g~y~~iGsw~Vg~~~aGigiRed~ 283 (297)
T d2io8a3 211 GYAVKPIAG--R-CGSNIDLVSHHEEVLDKTSGKFAEQKNIYQQLWCLPKVDGKYIQVCTFTVGGNYGGTCLRGDE 283 (297)
T ss_dssp CEEEEETTC--C-TTTTCEEECTTSCEEEECCCTTTTSCEEEEECCCCCEETTEEEEEEEEEETTEEEEEEEEEES
T ss_pred CcEeeeccc--c-cCCCEEEEeCCCceeeccCCCCCCCCeEEEeccCCCCcCCcEEEEEEEEECCEEEEEEEeeCC
Confidence 699999993 3 667898887665542 2 15679999999843 32 45679999988755 77753
No 26
>d1otha1 c.78.1.1 (A:34-184) Ornithine transcarbamoylase {Human (Homo sapiens) [TaxId: 9606]}
Probab=65.15 E-value=4.9 Score=31.41 Aligned_cols=72 Identities=10% Similarity=-0.002 Sum_probs=46.9
Q ss_pred CceEEEEEEecc-cccccccchHHHhhhhhcceEEEEeeCCCCCCcCCC------------ccEEEEccCchhHHHHHHH
Q 019600 27 SKLVVVGYALTS-KKTKSFLQPKLEGLARNKGILFVAIDQNRPLSDQGP------------FDIVLHKLTGKEWRQILEE 93 (338)
Q Consensus 27 ~~~~~VGy~l~~-kK~~~~~~~~l~~~~~~~gi~~~~id~~~~l~~qg~------------~DvilhK~~~~~~~~~l~~ 93 (338)
-+..+|+..+.+ +=+.+ -+|..++.+.|...+.++....-...|+ +|+|+.|.........+.+
T Consensus 44 L~gk~v~llF~epStRTR---~SFe~A~~~LGg~~i~l~~~~s~~~kgEs~~Dt~~~ls~~~D~ivir~~~~~~~~~~a~ 120 (151)
T d1otha1 44 LQGKSLGMIFEKRSTRTR---LSTETGFALLGGHPCFLTTQDIHLGVNESLTDTARVLSSMADAVLARVYKQSDLDTLAK 120 (151)
T ss_dssp TTTCEEEEEESSCCSHHH---HHHHHHHHHTTCEEEEEETTTSCBTTTBCHHHHHHHHHHHCSEEEEECSCHHHHHHHHH
T ss_pred cCCcEEEEEecCCchhhH---HHHHHHHHhhccceeecCCcccccccccchhHHHHHHHhcCCeEEEEeccccccccccc
Confidence 446688887776 22222 2388899999999999997764333332 6888888777543333333
Q ss_pred HHHhCCCceeeC
Q 019600 94 YRQTHPEVTVLD 105 (338)
Q Consensus 94 ~~~~~p~v~ViD 105 (338)
+-++||||
T Consensus 121 ----~~~~PvIN 128 (151)
T d1otha1 121 ----EASIPIIN 128 (151)
T ss_dssp ----HCSSCEEE
T ss_pred ----ccCccEEe
Confidence 34788888
No 27
>d1vlva1 c.78.1.1 (A:1-152) Ornithine transcarbamoylase {Thermotoga maritima [TaxId: 2336]}
Probab=62.58 E-value=8.3 Score=29.99 Aligned_cols=71 Identities=15% Similarity=0.154 Sum_probs=46.7
Q ss_pred ceEEEEEEecccc-cccccchHHHhhhhhcceEEEEeeCCCCCCcCC------------CccEEEEccCchhHHHHHHHH
Q 019600 28 KLVVVGYALTSKK-TKSFLQPKLEGLARNKGILFVAIDQNRPLSDQG------------PFDIVLHKLTGKEWRQILEEY 94 (338)
Q Consensus 28 ~~~~VGy~l~~kK-~~~~~~~~l~~~~~~~gi~~~~id~~~~l~~qg------------~~DvilhK~~~~~~~~~l~~~ 94 (338)
+..+|+..+.+.= +..+ +|..++.+.|...+.++.+..-...| =.|+|+.|-..+.....+.++
T Consensus 45 ~gk~v~llF~epSTRTR~---SFe~A~~~LG~~~i~l~~~~s~~~~gEs~~Dt~~~ls~~~d~iv~R~~~~~~~~~~a~~ 121 (152)
T d1vlva1 45 KGMTLAMIFEKRSTRTRL---AFETAFAEEGGHPIFLSPNDIHLGAKESLEDTARVLGRMVDAIMFRGYKQETVEKLAEY 121 (152)
T ss_dssp TTCEEEEEESSCCHHHHH---HHHHHHHHTTCEEEEECTTTCCTTTSSCHHHHHHHHHTTCSEEEEESSCHHHHHHHHHH
T ss_pred CCCeEEEEeecCcccchh---heehhhhhcccccccccccccccccchhHHHHHHHHhhccccEEEEecCccceeeeccc
Confidence 4567888887732 2222 27789999999999999876333332 378888887764333333333
Q ss_pred HHhCCCceeeC
Q 019600 95 RQTHPEVTVLD 105 (338)
Q Consensus 95 ~~~~p~v~ViD 105 (338)
..+||||
T Consensus 122 ----~~~PviN 128 (152)
T d1vlva1 122 ----SGVPVYN 128 (152)
T ss_dssp ----HCSCEEE
T ss_pred ----cceeEEe
Confidence 4688988
No 28
>d1pvva1 c.78.1.1 (A:1-150) Ornithine transcarbamoylase {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=58.68 E-value=6.3 Score=30.71 Aligned_cols=71 Identities=10% Similarity=0.119 Sum_probs=46.8
Q ss_pred ceEEEEEEecc-cccccccchHHHhhhhhcceEEEEeeCCCCCCcCC------------CccEEEEccCchhHHHHHHHH
Q 019600 28 KLVVVGYALTS-KKTKSFLQPKLEGLARNKGILFVAIDQNRPLSDQG------------PFDIVLHKLTGKEWRQILEEY 94 (338)
Q Consensus 28 ~~~~VGy~l~~-kK~~~~~~~~l~~~~~~~gi~~~~id~~~~l~~qg------------~~DvilhK~~~~~~~~~l~~~ 94 (338)
...+||..+-+ +=+.+. +|..+|.+.|.+++.+|....-...| =+|+|+.|...+.. ++++
T Consensus 44 ~~k~~~~lF~epSTRTR~---SFe~A~~~LG~~~i~~~~~~ss~~kgEs~~Dt~~~ls~~~D~iv~R~~~~~~---~~~~ 117 (150)
T d1pvva1 44 EGKTLAMIFQKPSTRTRV---SFEVAMAHLGGHALYLNAQDLQLRRGETIADTARVLSRYVDAIMARVYDHKD---VEDL 117 (150)
T ss_dssp TTCEEEEEESSCCSHHHH---HHHHHHHHTTSEEEEEEGGGSTTTTTCCHHHHHHHHTTTCSEEEEECSSHHH---HHHH
T ss_pred CCCeeEEEeecCCcchHH---HHHHHHHhcCCceEecCccccccccCCCHHHHHHHHHcCCCeeeeeccChhH---HHHH
Confidence 45577777665 323222 37789999999999998875322222 37999999877533 3444
Q ss_pred HHhCCCceeeC
Q 019600 95 RQTHPEVTVLD 105 (338)
Q Consensus 95 ~~~~p~v~ViD 105 (338)
. ++..++|||
T Consensus 118 a-~~~~~pvIN 127 (150)
T d1pvva1 118 A-KYATVPVIN 127 (150)
T ss_dssp H-HHCSSCEEE
T ss_pred H-HhcCCCEEe
Confidence 3 345788998
No 29
>d1ml4a1 c.78.1.1 (A:2-151) Aspartate carbamoyltransferase catalytic subunit {Archaeon Pyrococcus abyssi [TaxId: 29292]}
Probab=42.77 E-value=10 Score=29.36 Aligned_cols=74 Identities=12% Similarity=0.117 Sum_probs=45.9
Q ss_pred ceEEEEEEecccccccccchHHHhhhhhcceEEEE-eeCCCCCCcCC------------CccEEEEccCchhHHHHHHHH
Q 019600 28 KLVVVGYALTSKKTKSFLQPKLEGLARNKGILFVA-IDQNRPLSDQG------------PFDIVLHKLTGKEWRQILEEY 94 (338)
Q Consensus 28 ~~~~VGy~l~~kK~~~~~~~~l~~~~~~~gi~~~~-id~~~~l~~qg------------~~DvilhK~~~~~~~~~l~~~ 94 (338)
+..+||..+-+.-.+-- -+|..+|.+.|...+. ++....-...| =+|+|+.|...... ++++
T Consensus 42 ~gk~v~~lF~epStRTR--~SFe~A~~~LGg~~~~~~~~~~ss~~kgEsi~Dta~vls~~~d~iv~R~~~~~~---~~~~ 116 (150)
T d1ml4a1 42 KGKILATLFFEPSTRTR--LSFESAMHRLGGAVIGFAEASTSSVKKGESLRDTIKTVEQYCDVIVIRHPKEGA---ARLA 116 (150)
T ss_dssp TTCEEEEEESSCCSHHH--HHHHHHHHHTTCEEEEESCGGGSGGGGTCCHHHHHHHHTTTCSEEEEEESSTTH---HHHH
T ss_pred CCCeEEEeeccCCchHH--HHHHHHHHhcCCccccccccchhcccccchHHHHHHHHHHHHHHHhhhcccchh---hhhh
Confidence 45678888776332211 1388899999987664 45543222222 37999999776433 3333
Q ss_pred HHhCCCceeeChH
Q 019600 95 RQTHPEVTVLDPP 107 (338)
Q Consensus 95 ~~~~p~v~ViDp~ 107 (338)
+++.++||||-.
T Consensus 117 -~~~~~~PvINag 128 (150)
T d1ml4a1 117 -AEVAEVPVINAG 128 (150)
T ss_dssp -HHTCSSCEEEEE
T ss_pred -cccCCeeEEECC
Confidence 356789999943
No 30
>d1pg5a1 c.78.1.1 (A:1-146) Aspartate carbamoyltransferase catalytic subunit {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=36.78 E-value=18 Score=27.64 Aligned_cols=73 Identities=8% Similarity=0.070 Sum_probs=42.4
Q ss_pred CceEEEEEEeccc-ccccccchHHHhhhhhcceEEEEeeCCCC-CCcCC------------CccEEEEccCchhHHHHHH
Q 019600 27 SKLVVVGYALTSK-KTKSFLQPKLEGLARNKGILFVAIDQNRP-LSDQG------------PFDIVLHKLTGKEWRQILE 92 (338)
Q Consensus 27 ~~~~~VGy~l~~k-K~~~~~~~~l~~~~~~~gi~~~~id~~~~-l~~qg------------~~DvilhK~~~~~~~~~l~ 92 (338)
-+..+|+..+-+. =+.+. +|..+|.+.|...+.++-... ....| -+|+|+.|...+....
T Consensus 36 l~gk~l~llF~epStRTR~---SFe~A~~~LGg~~i~~~~~~~~~~~kgEs~~Dt~~~l~~~~d~iv~R~~~~~~~~--- 109 (146)
T d1pg5a1 36 LSGKTISIAFFEPSTRTYL---SFQKAIINLGGDVIGFSGEESTSVAKGENLADTIRMLNNYSDGIVMRHKYDGASR--- 109 (146)
T ss_dssp TTTCEEEEEESSCCHHHHH---HHHHHHHHTTCEEEEEECC-------CCCHHHHHHHHHHHCSEEEEEESSBTHHH---
T ss_pred CCCCEEEEEeeccchHHHH---HHHHHHHHccCcccccccchhhcccCcccHHHHHhHhhhcCCeEEEEecccccch---
Confidence 3456788777752 22222 378899999999887653331 22222 2689998866543322
Q ss_pred HHHHhCCCceeeCh
Q 019600 93 EYRQTHPEVTVLDP 106 (338)
Q Consensus 93 ~~~~~~p~v~ViDp 106 (338)
..+++..++|||-
T Consensus 110 -~~~~~~~vpvINa 122 (146)
T d1pg5a1 110 -FASEISDIPVINA 122 (146)
T ss_dssp -HHHHHCSSCEEEE
T ss_pred -hhhccCCccEEEC
Confidence 2334468899984
No 31
>d1js1x1 c.78.1.1 (X:1-163) Transcarbamylase-like protein {Bacteroides fragilis [TaxId: 817]}
Probab=29.32 E-value=91 Score=23.92 Aligned_cols=94 Identities=13% Similarity=0.072 Sum_probs=54.9
Q ss_pred HHHHHhhhhhccCCCcccCCCceEEEEEEeccc-ccccccchHHHhhhhhcceEEEEeeCCCCCC------------cCC
Q 019600 7 EIEEQTREEELLSFPQTQQQSKLVVVGYALTSK-KTKSFLQPKLEGLARNKGILFVAIDQNRPLS------------DQG 73 (338)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~VGy~l~~k-K~~~~~~~~l~~~~~~~gi~~~~id~~~~l~------------~qg 73 (338)
+|=.+|.+..- .+......-+..+||..+.+- =+.+. +|..++.++|..++.|+....-. ..|
T Consensus 15 ~ll~~A~~~k~-~~~~~~~~l~~K~v~~lF~epSTRTR~---SFe~A~~~LGg~~i~l~~~~ss~~~~~~~~~~~~~~kg 90 (163)
T d1js1x1 15 SALAESFEIKK-DRFKYVELGRNKTLLMIFFNSSLRTRL---STQKAALNLGMNVIVLDINQGAWKLETERGVIMDGDKP 90 (163)
T ss_dssp HHHHHHHHHHH-STTTTTTTTTTCEEEEEESSCCSHHHH---HHHHHHHHTTCEEEEEECCGGGCCEECCSSCCCCSSCC
T ss_pred HHHHHHHHHHh-CccccccccCCCEEEEEecCCchhHHH---HHHHHHHhcCCceEeeccccccccccccccceecCcCC
Confidence 34445555542 222222334567888887762 22222 37889999999999999865210 122
Q ss_pred ------------CccEEEEccCch-------hHHHHHHHHHHhCCCceeeC
Q 019600 74 ------------PFDIVLHKLTGK-------EWRQILEEYRQTHPEVTVLD 105 (338)
Q Consensus 74 ------------~~DvilhK~~~~-------~~~~~l~~~~~~~p~v~ViD 105 (338)
=+|+|+.|.... .....+.++. +|.++||||
T Consensus 91 Es~~Dt~~vls~~~D~iviR~~~~~~~~~~~~~~~~~~~~a-~~s~vPVIN 140 (163)
T d1js1x1 91 EHLLEAIPVMGCYCDIIGVRSFARFENREYDYNEVIINQFI-QHSGRPVFS 140 (163)
T ss_dssp EEHHHHHHHHHHTCSEEEEECCCCSSCHHHHHHTHHHHHHH-HHSSSCEEE
T ss_pred CCHHHHHHHHHHhCcEEEEecccccchhhhhhhhhHHHHHH-HhCCCCEEc
Confidence 279999997442 1112344444 456788988
No 32
>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}
Probab=28.22 E-value=23 Score=24.31 Aligned_cols=58 Identities=14% Similarity=0.166 Sum_probs=37.1
Q ss_pred HHHhhhhhcceEEEEeeCCCCCCc-CCCccEEEEccCchhH-HHHHHHHHHhCCCceeeChH
Q 019600 48 KLEGLARNKGILFVAIDQNRPLSD-QGPFDIVLHKLTGKEW-RQILEEYRQTHPEVTVLDPP 107 (338)
Q Consensus 48 ~l~~~~~~~gi~~~~id~~~~l~~-qg~~DvilhK~~~~~~-~~~l~~~~~~~p~v~ViDp~ 107 (338)
-|..+|.+.|+++..+|++..-.. +-.-|+|---... | ...+.+..++||.++-+|-+
T Consensus 15 Ml~~Aa~~LG~~v~vldp~~~~pa~~~a~dvIT~e~E~--~~~~~l~~~la~~~~Fvn~~~~ 74 (78)
T d3etja2 15 MLRQAGEPLGIAVWPVGLDAEPAAVPFQQSVITAEIER--WPETALTRQLARHPAFVNRDVF 74 (78)
T ss_dssp HHHHHHGGGTEEEEEECTTSCGGGSCGGGSEEEESSSC--CCCCHHHHHHHTCTTBTTTTTH
T ss_pred HHHHHHHHcCCEEEEEcCCCCCcccccccceEEEeecc--CChHHHHHHHHHCCCccChhhh
Confidence 367789999999999999763322 3344666543322 2 23455667788877655543
No 33
>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}
Probab=25.51 E-value=68 Score=22.87 Aligned_cols=35 Identities=14% Similarity=0.064 Sum_probs=26.4
Q ss_pred eEEEEEEecccccccccchHHHhhhhhcceEEEEeeCCCC
Q 019600 29 LVVVGYALTSKKTKSFLQPKLEGLARNKGILFVAIDQNRP 68 (338)
Q Consensus 29 ~~~VGy~l~~kK~~~~~~~~l~~~~~~~gi~~~~id~~~~ 68 (338)
..+||..-.- ...+-|..+|+++|+++..+|++..
T Consensus 11 ~~kigIlGgG-----QL~rMla~aA~~lG~~v~v~d~~~~ 45 (111)
T d1kjqa2 11 ATRVMLLGSG-----ELGKEVAIECQRLGVEVIAVDRYAD 45 (111)
T ss_dssp CCEEEEESCS-----HHHHHHHHHHHTTTCEEEEEESSTT
T ss_pred CCEEEEEeCC-----HHHHHHHHHHHHCCCEEEEEcCCCC
Confidence 3467777654 3445578899999999999999763
No 34
>d1jyea_ c.93.1.1 (A:) Lac-repressor (lacR) core (C-terminal domain) {Escherichia coli [TaxId: 562]}
Probab=21.22 E-value=73 Score=25.45 Aligned_cols=37 Identities=16% Similarity=0.120 Sum_probs=24.9
Q ss_pred EEEEEEecccccccc--cchHHHhhhhhcceEEEEeeCC
Q 019600 30 VVVGYALTSKKTKSF--LQPKLEGLARNKGILFVAIDQN 66 (338)
Q Consensus 30 ~~VGy~l~~kK~~~~--~~~~l~~~~~~~gi~~~~id~~ 66 (338)
+.||..++.---.-| ....+.++|+++|++++..+.+
T Consensus 1 ~~igv~~~~l~~~~~~~i~~~i~~~a~~~Gy~v~v~~~~ 39 (271)
T d1jyea_ 1 LLIGVATSSLALHAPSQIVAAILSRADQLGASVVVSMVE 39 (271)
T ss_dssp CEEEEEESCTTSHHHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEEECC
Confidence 468888886543333 3344777999999998776654
No 35
>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}
Probab=20.96 E-value=38 Score=24.36 Aligned_cols=15 Identities=20% Similarity=0.220 Sum_probs=8.7
Q ss_pred HHHhhhhhcceEEEE
Q 019600 48 KLEGLARNKGILFVA 62 (338)
Q Consensus 48 ~l~~~~~~~gi~~~~ 62 (338)
.+.+..++.|+++..
T Consensus 18 ~l~~~L~~~g~~v~~ 32 (123)
T d1krwa_ 18 VLERALAGAGLTCTT 32 (123)
T ss_dssp HHHHHHHHTTCEEEE
T ss_pred HHHHHHHHCCCEEEE
Confidence 345566666766543
No 36
>d1qo0d_ c.23.1.3 (D:) Positive regulator of the amidase operon AmiR {Pseudomonas aeruginosa [TaxId: 287]}
Probab=20.07 E-value=1.4e+02 Score=22.29 Aligned_cols=33 Identities=15% Similarity=0.036 Sum_probs=22.3
Q ss_pred chHHHhhhhhcceEEEEeeCCC-CCCcCCCccEEEE
Q 019600 46 QPKLEGLARNKGILFVAIDQNR-PLSDQGPFDIVLH 80 (338)
Q Consensus 46 ~~~l~~~~~~~gi~~~~id~~~-~l~~qg~~Dvilh 80 (338)
...+....++.|+++....... .+ ..+||+||.
T Consensus 24 ~~~l~~~L~~~G~~v~~~~~~~~al--~~~~Dlvl~ 57 (189)
T d1qo0d_ 24 SDALVLQLIRIGCSVRQCWPPPEAF--DVPVDVVFT 57 (189)
T ss_dssp HHHHHHHHHHHTCEEEEECSCCSSC--SSCCSEEEE
T ss_pred HHHHHHHHHHcCCcceecCCHHHhc--cCCCCEEEE
Confidence 3446667788899998875433 33 347888874
Done!