BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019601
(338 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3BPT|A Chain A, Crystal Structure Of Human Beta-Hydroxyisobutyryl-Coa
Hydrolase In Complex With Quercetin
Length = 363
Score = 200 bits (508), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 113/315 (35%), Positives = 185/315 (58%), Gaps = 18/315 (5%)
Query: 10 ESWEENPDIGFVLMKGAG-RAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTF 68
+ WE++P+ +++KGAG +AFC+GGD+ + + + K + FF Y G+
Sbjct: 43 KKWEQDPETFLIIIKGAGGKAFCAGGDIRVISEA-EKAKQKIAPVFFREEYXLNNAVGSC 101
Query: 69 VKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL 128
KP+VA++ GIT G G G+S+ G +RV T+K +F+ PET +G PD G ++L L G L
Sbjct: 102 QKPYVALIHGITXGGGVGLSVHGQFRVATEKCLFAXPETAIGLFPDVGGGYFLPRLQGKL 161
Query: 129 GEYLALTGEKLNGVEMIACGLATHYTLNGRLPLVEERVGKLITDDPSIIETSLAQYGDLV 188
G +LALTG +L G ++ G+ATH+ + +L +EE + L + I + L Y
Sbjct: 162 GYFLALTGFRLKGRDVYRAGIATHFVDSEKLAXLEEDLLALKSPSKENIASVLENYHTES 221
Query: 189 SLDRESVL---RKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLK---EASP 242
+DR+ + I+ CFS +T+EEII+ L+ + +S A+E+LK + SP
Sbjct: 222 KIDRDKSFILEEHXDKINSCFSANTVEEIIENLQQDGSSF-------ALEQLKVINKXSP 274
Query: 243 LSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDP 302
SLK+TL+ + EG ++L + L EYR++ + +DF EG+RA L+DKD +PKW P
Sbjct: 275 TSLKITLRQLXEGSSKTLQEVLTXEYRLSQ---ACXRGHDFHEGVRAVLIDKDQSPKWKP 331
Query: 303 PSLADVSKDMVDCYF 317
L +V+++ ++ +F
Sbjct: 332 ADLKEVTEEDLNNHF 346
>pdb|4HDT|A Chain A, Crystal Structure Of A Carnitinyl-Coa Dehydratase From
Mycobacterium Thermoresistibile
Length = 353
Score = 181 bits (459), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 120/329 (36%), Positives = 182/329 (55%), Gaps = 21/329 (6%)
Query: 1 MVGRLKRLYESWEENPDIGFVLMKGAG-RAFCSGGDVIALYQLLNEGKFEDFKNFFETLY 59
MV + +WE + + VL+ GAG R C+GGDV+A+Y E + +F+ Y
Sbjct: 37 MVTTMAERLAAWENDDSVRAVLLTGAGERGLCAGGDVVAIYHSAKADGAEARRFWFDE-Y 95
Query: 60 QFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASF 119
+ G + KP+V+I+DGI MG G G+ G RVVTD T + PE +GF PD G ++
Sbjct: 96 RLNAHIGRYPKPYVSIMDGIVMGGGVGVGAHGNVRVVTDTTKMAMPEVGIGFIPDVGGTY 155
Query: 120 YLSHLPGYLGEYLALTGEKLNGVEMIACGLATHYTLNGRLPLVEERVGKLITDDPSIIET 179
LS PG LG + ALTG +G + I G A HY + + ++E +I D ++
Sbjct: 156 LLSRAPGKLGLHAALTGAPFSGADAIVMGFADHYVPHDK---IDEFTRAVIADG---VDA 209
Query: 180 SLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKE 239
+LA + + + ID+C++ DT+ +II AL A + +A + +
Sbjct: 210 ALAAHAQ--EPPASPLAEQRSWIDECYTGDTVADIIAALRAHDAPA----AGEAADLIAT 263
Query: 240 ASPLSLKVTLQSIRE-GRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAP 298
SP++L VTL+S+R + QSL+ L +EYR++ + S+D EGIRA+LVDKD P
Sbjct: 264 RSPIALSVTLESVRRAAKLQSLEDTLRQEYRVSCASLK---SHDLVEGIRAQLVDKDRNP 320
Query: 299 KWDPPSLADVSKDMVDCYFSPFDELEPEL 327
KW P +LA+V++ V+ YF+P D PEL
Sbjct: 321 KWRPATLAEVTEADVEAYFAPVD---PEL 346
>pdb|3JU1|A Chain A, Crystal Structure Of Enoyl-Coa HydrataseISOMERASE FAMILY
PROTEIN
pdb|3JU1|B Chain B, Crystal Structure Of Enoyl-Coa HydrataseISOMERASE FAMILY
PROTEIN
Length = 407
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/330 (32%), Positives = 165/330 (50%), Gaps = 18/330 (5%)
Query: 12 WEENPDIGFVLMKGAG-RAFCSGGDVIALYQLLNEGK---FEDFKNFFETLYQFVYLQGT 67
W+++P I V++ G+G +AFC+GGDV ALY K E K FFE Y+ YL T
Sbjct: 81 WKKDPLIACVVLDGSGEKAFCAGGDVRALYHASVAAKGQVTEVAKVFFEEEYRLDYLLHT 140
Query: 68 FVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGY 127
+ KP + DGI G G G+ ++VVT+ + + PE +G +PD G S++L+ PG
Sbjct: 141 YGKPVLVWGDGIVXGGGLGLXAGASHKVVTETSRIAXPEVTIGLYPDVGGSYFLNRXPGK 200
Query: 128 LGEYLALTGEKLNGVEMIACGLATHYTLNGRLPLVEERVGKL-ITDDPSI----IETSLA 182
G +L LT N + GLA HY L + L +D P++ ++T +
Sbjct: 201 XGLFLGLTAYHXNAADACYVGLADHYLNRDDKELXFDAXATLDWSDSPALNHQRLDTXIN 260
Query: 183 QYGDLVSLDR-ESVLRKI-ETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKEA 240
+ + V + + +SVL + E ID+ + ++ +I+ S+ + W KA
Sbjct: 261 ELSNQVDIPKGDSVLAESQEXIDRLXA-GSLTDIV--TRXSTLSTDEAWLSKACATXLAG 317
Query: 241 SPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKW 300
SP+S + + G SL QC E +++N +K DFCEG+RA L+DKD PKW
Sbjct: 318 SPISWHLAYIQTQLGTKLSLAQCFKWELTVSVNVCAK---GDFCEGVRALLIDKDKQPKW 374
Query: 301 DPPSLADVSKDMV-DCYFSPFDELEPELQL 329
+ V ++ D SP+ E P QL
Sbjct: 375 QFADVQSVPNSVIEDILTSPWGEEHPLSQL 404
>pdb|4J2U|A Chain A, Crystal Structure Of An Enoyl-coa Hydratase From
Rhodobacter Sphaeroides 2.4.1
pdb|4J2U|B Chain B, Crystal Structure Of An Enoyl-coa Hydratase From
Rhodobacter Sphaeroides 2.4.1
Length = 365
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 145/316 (45%), Gaps = 30/316 (9%)
Query: 11 SWEENPDIGFVLMKGAG-RAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFV 69
W +P++ V++ G RAFC+GGD+ L+ G ++F+ Y+ F
Sbjct: 62 GWIGDPEVELVVIDAEGPRAFCAGGDIAELHGRGVAGDHAFGQDFWRVEYRXNDRIAAFP 121
Query: 70 KPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYLG 129
KP V++ G T G G G+ +R+V + + S PE +G PD G + L+ PG +G
Sbjct: 122 KPIVSLXQGFTXGGGVGLGCHARHRIVGETSQISXPECAIGLVPDVGGTHLLARAPGRIG 181
Query: 130 EYLALTGEKLNGVEMIACGLATHYTLNGRLPLVEERVGKLITDDPSIIETSLAQYGDLVS 189
+L LTG + + I G A + D P +I + + GDL
Sbjct: 182 VWLGLTGARXGPGDAIFAGFADRFVPE--------------ADWPDLI--AALEGGDLAL 225
Query: 190 LDRESVLRKI----ETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKEASPLSL 245
D + ++ + ID+ F+ T+ EI LE ++ +A++ L+ +SPL+L
Sbjct: 226 PDHAAPEGRLPVLQDEIDRLFA-GTLAEIPARLE----ATDTPLAAEALKALRRSSPLAL 280
Query: 246 KVTLQSI-REGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDPPS 304
TL+ + R G + + L EYR T + DF EGIRA ++DKD +P+W
Sbjct: 281 AATLEILQRLGPSAGIREALDLEYRFTYRAQGQA---DFLEGIRAAIIDKDRSPRWRHGD 337
Query: 305 LADVSKDMVDCYFSPF 320
V + V +P
Sbjct: 338 PEAVRPEEVASLLAPL 353
>pdb|3RSI|A Chain A, The Structure Of A Putative Enoyl-Coa HydrataseISOMERASE
FROM Mycobacterium Abscessus Atcc 19977 DSM 44196
pdb|3RSI|B Chain B, The Structure Of A Putative Enoyl-Coa HydrataseISOMERASE
FROM Mycobacterium Abscessus Atcc 19977 DSM 44196
pdb|3RSI|C Chain C, The Structure Of A Putative Enoyl-Coa HydrataseISOMERASE
FROM Mycobacterium Abscessus Atcc 19977 DSM 44196
Length = 265
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 69/158 (43%), Gaps = 4/158 (2%)
Query: 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQ 60
MV + ++ + + I ++ GAG A+C GGD+ + ++ +G T+ +
Sbjct: 37 MVSQFAAAWDEIDHDDGIRAAILTGAGSAYCVGGDLSDGW-MVRDGSAPPLDP--ATIGK 93
Query: 61 FVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFY 120
+ L T KP +A ++G +G G + Q RV + F PE Q G P AG+
Sbjct: 94 GLLLSHTLTKPLIAAVNGACLGGGCEMLQQTDIRVSDEHATFGLPEVQRGLVPGAGSMVR 153
Query: 121 LS-HLPGYLGEYLALTGEKLNGVEMIACGLATHYTLNG 157
L +P + LTGE L E GL H G
Sbjct: 154 LKRQIPYTKAMEMILTGEPLTAFEAYHFGLVGHVVPAG 191
>pdb|3HRX|A Chain A, Crystal Structure Of Phenylacetic Acid Degradation Protein
Paag
pdb|3HRX|B Chain B, Crystal Structure Of Phenylacetic Acid Degradation Protein
Paag
pdb|3HRX|C Chain C, Crystal Structure Of Phenylacetic Acid Degradation Protein
Paag
pdb|3HRX|D Chain D, Crystal Structure Of Phenylacetic Acid Degradation Protein
Paag
pdb|3HRX|E Chain E, Crystal Structure Of Phenylacetic Acid Degradation Protein
Paag
pdb|3HRX|F Chain F, Crystal Structure Of Phenylacetic Acid Degradation Protein
Paag
Length = 254
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 6/138 (4%)
Query: 13 EENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPH 72
EE+ ++ +L+ GAGRAF +G D+ + D++ + V KP
Sbjct: 40 EEDREVRALLLTGAGRAFSAGQDLTEFGD-----RKPDYEAHLRRYNRVVEALSGLEKPL 94
Query: 73 VAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEY 131
V ++G+ G G ++L G R+ F+ ++G PD+G SF L L G +
Sbjct: 95 VVAVNGVAAGAGMSLALWGDLRLAAVGASFTTAFVRIGLVPDSGLSFLLPRLVGLAKAQE 154
Query: 132 LALTGEKLNGVEMIACGL 149
L L +L+ E +A GL
Sbjct: 155 LLLLSPRLSAEEALALGL 172
>pdb|3QXZ|A Chain A, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3QXZ|B Chain B, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3QXZ|C Chain C, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
Length = 265
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 70/157 (44%), Gaps = 6/157 (3%)
Query: 4 RLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVY 63
+L Y+ +++P + +++ GA AFCSG + A + + DF F
Sbjct: 38 QLGAAYQRLDDDPAVRVIVLTGAPPAFCSGAQISAAAETFAAPRNPDFSASPVQPAAF-- 95
Query: 64 LQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSH 123
P +A ++G +G G ++L R++ ++ ++ P+ + G PDA A + L
Sbjct: 96 ---ELRTPVIAAVNGHAIGIGMTLALHADIRILAEEGRYAIPQVRFGVAPDALAHWTLPR 152
Query: 124 LPG-YLGEYLALTGEKLNGVEMIACGLATHYTLNGRL 159
L G + L LTG + + GLA G++
Sbjct: 153 LVGTAVAAELLLTGASFSAQRAVETGLANRCLPAGKV 189
>pdb|3Q0J|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
pdb|3Q0J|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
pdb|3Q0J|C Chain C, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
pdb|3Q0J|D Chain D, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
pdb|3Q0J|E Chain E, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
pdb|3Q0J|F Chain F, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
Length = 258
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 7/141 (4%)
Query: 13 EENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPH 72
+++PDIG +++ G+ +AF +G D+ + L F +FF T + ++ P
Sbjct: 45 DDDPDIGAIIITGSAKAFAAGADIKEMADLTFADAFT--ADFFATWGKLAAVR----TPT 98
Query: 73 VAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYLGEY- 131
+A + G +G G +++ + D F PE ++G P G S L+ G
Sbjct: 99 IAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMD 158
Query: 132 LALTGEKLNGVEMIACGLATH 152
L LTG ++ E GL +
Sbjct: 159 LILTGRTMDAAEAERSGLVSR 179
>pdb|3PZK|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Apo Form
pdb|3PZK|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Apo Form
pdb|3PZK|C Chain C, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Apo Form
pdb|3Q0G|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
pdb|3Q0G|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
pdb|3Q0G|C Chain C, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
pdb|3Q0G|D Chain D, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
pdb|3Q0G|E Chain E, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
pdb|3Q0G|F Chain F, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
Length = 257
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 7/141 (4%)
Query: 13 EENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPH 72
+++PDIG +++ G+ +AF +G D+ + L F +FF T + ++ P
Sbjct: 44 DDDPDIGAIIITGSAKAFAAGADIKEMADLTFADAFT--ADFFATWGKLAAVR----TPT 97
Query: 73 VAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYLGEY- 131
+A + G +G G +++ + D F PE ++G P G S L+ G
Sbjct: 98 IAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMD 157
Query: 132 LALTGEKLNGVEMIACGLATH 152
L LTG ++ E GL +
Sbjct: 158 LILTGRTMDAAEAERSGLVSR 178
>pdb|3H81|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
pdb|3H81|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
pdb|3H81|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
Length = 278
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 7/141 (4%)
Query: 13 EENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPH 72
+++PDIG +++ G+ +AF +G D+ + L F +FF T + ++ P
Sbjct: 65 DDDPDIGAIIITGSAKAFAAGADIKEMADLTFADAFT--ADFFATWGKLAAVR----TPT 118
Query: 73 VAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYLGEY- 131
+A + G +G G +++ + D F PE ++G P G S L+ G
Sbjct: 119 IAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMD 178
Query: 132 LALTGEKLNGVEMIACGLATH 152
L LTG ++ E GL +
Sbjct: 179 LILTGRTMDAAEAERSGLVSR 199
>pdb|3QMJ|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa8_6 From
Mycobacterium Marinum
Length = 256
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 65/137 (47%), Gaps = 4/137 (2%)
Query: 14 ENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHV 73
++P + VL+ G+GR F +G D+ + + + F + K F L + + F KP +
Sbjct: 47 DDPQVAVVLLTGSGRGFSAGTDLAEMQARITDPNFSEGKFGFRGLIKAL---AGFPKPLI 103
Query: 74 AILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYL 132
++G+ +G GA I ++ P T +G P+A +S+ L L G +L
Sbjct: 104 CAVNGLGVGIGATILGYADLAFMSSTARLKCPFTSLGVAPEAASSYLLPQLVGRQNAAWL 163
Query: 133 ALTGEKLNGVEMIACGL 149
++ E ++ E + GL
Sbjct: 164 LMSSEWIDAEEALRMGL 180
>pdb|3P5M|A Chain A, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
pdb|3P5M|B Chain B, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
pdb|3P5M|C Chain C, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
pdb|3P5M|D Chain D, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
pdb|3P5M|E Chain E, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
pdb|3P5M|F Chain F, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
Length = 255
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 62/143 (43%), Gaps = 11/143 (7%)
Query: 13 EENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPH 72
E + + VL+ GAGRAFCSGGD+ + + V + KP
Sbjct: 46 EADESVRAVLLTGAGRAFCSGGDLTGGDT----------AGAADAANRVVRAITSLPKPV 95
Query: 73 VAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEY 131
+A + G +G G ++L V + F T++G PD GAS L L G
Sbjct: 96 IAGVHGAAVGFGCSLALACDLVVAAPASYFQLAFTRVGLMPDGGASALLPLLIGRARTSR 155
Query: 132 LALTGEKLNGVEMIACGLATHYT 154
+A+T EK++ G+ +H T
Sbjct: 156 MAMTAEKISAATAFEWGMISHIT 178
>pdb|1EY3|A Chain A, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
pdb|1EY3|B Chain B, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
pdb|1EY3|C Chain C, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
pdb|1EY3|D Chain D, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
pdb|1EY3|E Chain E, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
pdb|1EY3|F Chain F, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
Length = 258
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 93/202 (46%), Gaps = 29/202 (14%)
Query: 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFED-FKNFFETLY 59
++ L + E++EE+P +G +++ G +AF +G D+ + + F+D + F + +
Sbjct: 33 LIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADI----KEMQNRTFQDCYSGKFLSHW 88
Query: 60 QFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASF 119
+ KP +A ++G +G G +++ +K F PE +G P AG +
Sbjct: 89 DHIT---RIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQ 145
Query: 120 YLSHLPG-YLGEYLALTGEKLNGVEMIACGLATHYTLNGRLP---LVEERV--GKLITDD 173
L+ G L + LTG++++ + GL + P LVEE + + I ++
Sbjct: 146 RLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKI-----FPVETLVEEAIQCAEKIANN 200
Query: 174 PSIIETSLAQYGDLVSLDRESV 195
II V++ +ESV
Sbjct: 201 SKII----------VAMAKESV 212
>pdb|1MJ3|A Chain A, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
pdb|1MJ3|B Chain B, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
pdb|1MJ3|C Chain C, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
pdb|1MJ3|D Chain D, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
pdb|1MJ3|E Chain E, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
pdb|1MJ3|F Chain F, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
Length = 260
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 93/202 (46%), Gaps = 29/202 (14%)
Query: 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFED-FKNFFETLY 59
++ L + E++EE+P +G +++ G +AF +G D+ + + F+D + F + +
Sbjct: 35 LIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADI----KEMQNRTFQDCYSGKFLSHW 90
Query: 60 QFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASF 119
+ KP +A ++G +G G +++ +K F PE +G P AG +
Sbjct: 91 DHIT---RIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQ 147
Query: 120 YLSHLPG-YLGEYLALTGEKLNGVEMIACGLATHYTLNGRLP---LVEERV--GKLITDD 173
L+ G L + LTG++++ + GL + P LVEE + + I ++
Sbjct: 148 RLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKI-----FPVETLVEEAIQCAEKIANN 202
Query: 174 PSIIETSLAQYGDLVSLDRESV 195
II V++ +ESV
Sbjct: 203 SKII----------VAMAKESV 214
>pdb|1DUB|A Chain A, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|1DUB|B Chain B, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|1DUB|C Chain C, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|1DUB|D Chain D, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|1DUB|E Chain E, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|1DUB|F Chain F, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|2DUB|A Chain A, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
pdb|2DUB|B Chain B, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
pdb|2DUB|C Chain C, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
pdb|2DUB|D Chain D, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
pdb|2DUB|E Chain E, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
pdb|2DUB|F Chain F, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
Length = 261
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 93/202 (46%), Gaps = 29/202 (14%)
Query: 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFED-FKNFFETLY 59
++ L + E++EE+P +G +++ G +AF +G D+ + + F+D + F + +
Sbjct: 36 LIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADI----KEMQNRTFQDCYSGKFLSHW 91
Query: 60 QFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASF 119
+ KP +A ++G +G G +++ +K F PE +G P AG +
Sbjct: 92 DHIT---RIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQ 148
Query: 120 YLSHLPG-YLGEYLALTGEKLNGVEMIACGLATHYTLNGRLP---LVEERV--GKLITDD 173
L+ G L + LTG++++ + GL + P LVEE + + I ++
Sbjct: 149 RLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKI-----FPVETLVEEAIQCAEKIANN 203
Query: 174 PSIIETSLAQYGDLVSLDRESV 195
II V++ +ESV
Sbjct: 204 SKII----------VAMAKESV 215
>pdb|3RRV|A Chain A, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3RRV|B Chain B, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3RRV|C Chain C, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3RRV|D Chain D, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3RRV|E Chain E, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3RRV|F Chain F, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
Length = 276
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 63/149 (42%), Gaps = 3/149 (2%)
Query: 5 LKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYL 64
L RL++ ++P ++ GAGRAF +GGD L +L + + V
Sbjct: 60 LARLWQRLTDDPTARAAVITGAGRAFSAGGDFGYLKELSADADLR--AKTIRDGREIVLG 117
Query: 65 QGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGF-HPDAGASFYLSH 123
P VA ++G +G G + + + ++P Q+G D G + H
Sbjct: 118 MARCRIPVVAAVNGPAVGLGCSLVALSDIVYIAENAYLADPHVQVGLVAADGGPLTWPLH 177
Query: 124 LPGYLGEYLALTGEKLNGVEMIACGLATH 152
+ L + ALTG +++ + GLA H
Sbjct: 178 ISLLLAKEYALTGTRISAQRAVELGLANH 206
>pdb|2PBP|A Chain A, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) From Geobacillus Kaustophilus Hta426
pdb|2QQ3|A Chain A, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|B Chain B, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|C Chain C, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|D Chain D, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|E Chain E, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|F Chain F, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|G Chain G, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|H Chain H, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|I Chain I, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|J Chain J, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|K Chain K, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|L Chain L, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
Length = 258
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 72/156 (46%), Gaps = 13/156 (8%)
Query: 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQ 60
MV + E+++ N + +++ G GRAF +G D+ + + D E L Q
Sbjct: 33 MVAEIVAAVEAFDRNEKVRVIVLTGRGRAFAAGADIQEMAK--------DDPIRLEWLNQ 84
Query: 61 FV-YLQGTFVK-PHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGAS 118
F + + + VK P +A ++G+ +G G ++L V + F PE +G P AG +
Sbjct: 85 FADWDRLSIVKTPMIAAVNGLALGGGFELALSCDLIVASSAAEFGFPEVNLGVMPGAGGT 144
Query: 119 FYLSHL--PGYLGEYLALTGEKLNGVEMIACGLATH 152
L+ L P E+L TG +++ E G+
Sbjct: 145 QRLTKLIGPKRALEWL-WTGARMSAKEAEQLGIVNR 179
>pdb|2HW5|A Chain A, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
pdb|2HW5|B Chain B, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
pdb|2HW5|C Chain C, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
pdb|2HW5|D Chain D, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
pdb|2HW5|E Chain E, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
pdb|2HW5|F Chain F, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
Length = 286
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 73/158 (46%), Gaps = 17/158 (10%)
Query: 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFED-----FKNFF 55
++ L + + +EE+P +G +++ G +AF +G D+ + L F+D F +
Sbjct: 61 LIDELNQALKIFEEDPAVGAIVLTGGDKAFAAGADIKEMQNL----SFQDCYSSKFLKHW 116
Query: 56 ETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDA 115
+ L Q KP +A ++G G G +++ +K F+ PE +G P A
Sbjct: 117 DHLTQ-------VKKPVIAAVNGYAFGGGCELAMMCDIIYAGEKAQFAQPEILIGTIPGA 169
Query: 116 GASFYLSHLPG-YLGEYLALTGEKLNGVEMIACGLATH 152
G + L+ G L + LTG++++ + GL +
Sbjct: 170 GGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSK 207
>pdb|1UIY|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Thermus
Thermophilus Hb8
Length = 253
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 5/148 (3%)
Query: 13 EENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFE--TLYQFVYLQGTFVK 70
E +P + V++ G G+AF +G D+ L ++ G E++++ L+ VY T+ K
Sbjct: 39 EADPGVRAVVLTGRGKAFSAGADLAFLERVTELGAEENYRHSLSLXRLFHRVY---TYPK 95
Query: 71 PHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYLGE 130
P VA ++G + GAG++L V ++ E ++GF + + + +
Sbjct: 96 PTVAAVNGPAVAGGAGLALACDLVVXDEEARLGYTEVKIGFVAALVSVILVRAVGEKAAK 155
Query: 131 YLALTGEKLNGVEMIACGLATHYTLNGR 158
L LTG + E A GL G+
Sbjct: 156 DLLLTGRLVEAREAKALGLVNRIAPPGK 183
>pdb|2EJ5|A Chain A, Crystal Structure Of Gk2038 Protein (Enoyl-Coa Hydratase
Subunit Ii) From Geobacillus Kaustophilus
pdb|2EJ5|B Chain B, Crystal Structure Of Gk2038 Protein (Enoyl-Coa Hydratase
Subunit Ii) From Geobacillus Kaustophilus
Length = 257
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 69/127 (54%), Gaps = 6/127 (4%)
Query: 15 NPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVA 74
+P++ V++ GAGRAFC+G D+ + + ++ G ++ + + + ++ KP VA
Sbjct: 45 DPNVRCVVITGAGRAFCAGEDLSGVTEEMDHGDV--LRSRYAPMMKALH---HLEKPVVA 99
Query: 75 ILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYLGEY-LA 133
++G G G ++L +R++++K F+ +G PDAG +YL L G LA
Sbjct: 100 AVNGAAAGAGMSLALACDFRLLSEKASFAPAFIHVGLVPDAGHLYYLPRLVGRAKALELA 159
Query: 134 LTGEKLN 140
+ GEK+
Sbjct: 160 VLGEKVT 166
>pdb|4F47|A Chain A, The Structure Of Enoyl-Coa Hydratase Echa19 From
Mycobacterium Marinum
Length = 278
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 9/160 (5%)
Query: 5 LKRLYESWEE---NPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQF 61
++ + E+W+ +PDI ++ GAG FC+G D+ A + F+D ++
Sbjct: 49 MQIMVEAWDRVDNDPDIRCCILTGAGGYFCAGMDLKAATKKPPGDSFKD--GSYDPSRID 106
Query: 62 VYLQG-TFVKPHVAILDGITMGCGAGISLQGM-YRVVTDKTVFSNPETQMGFHPDAGASF 119
L+G KP +A ++G + G I LQG RV + F E + +P G++
Sbjct: 107 ALLKGRRLKKPLIAAVEGPAIAGGTEI-LQGTDIRVAAESAKFGISEAKWSLYPMGGSAV 165
Query: 120 YL-SHLPGYLGEYLALTGEKLNGVEMIACGLATHYTLNGR 158
L +P + L LTG + E GL H +G+
Sbjct: 166 RLVRQIPYTVACDLLLTGRHITAAEAKEMGLVGHVVPDGQ 205
>pdb|3FDU|A Chain A, Crystal Structure Of A Putative Enoyl-Coa
HydrataseISOMERASE FROM Acinetobacter Baumannii
pdb|3FDU|B Chain B, Crystal Structure Of A Putative Enoyl-Coa
HydrataseISOMERASE FROM Acinetobacter Baumannii
pdb|3FDU|C Chain C, Crystal Structure Of A Putative Enoyl-Coa
HydrataseISOMERASE FROM Acinetobacter Baumannii
pdb|3FDU|D Chain D, Crystal Structure Of A Putative Enoyl-Coa
HydrataseISOMERASE FROM Acinetobacter Baumannii
pdb|3FDU|E Chain E, Crystal Structure Of A Putative Enoyl-Coa
HydrataseISOMERASE FROM Acinetobacter Baumannii
pdb|3FDU|F Chain F, Crystal Structure Of A Putative Enoyl-Coa
HydrataseISOMERASE FROM Acinetobacter Baumannii
Length = 266
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 63/156 (40%), Gaps = 23/156 (14%)
Query: 5 LKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFET------- 57
+ + + ++N D+ V+++GA F +G D+ +DF F +
Sbjct: 37 IAKALDEADQNKDVRVVVLRGAEHDFTAGNDM------------KDFMGFVQNPNAGPAG 84
Query: 58 -LYQFVYLQGT--FVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPD 114
+ FV L+ KP + + G+ +G G I LQ + +F P +G P+
Sbjct: 85 QVPPFVLLKSAARLSKPLIIAVKGVAIGIGVTILLQADLVFADNTALFQIPFVSLGLSPE 144
Query: 115 AGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGL 149
GAS L GY L T +K N + GL
Sbjct: 145 GGASQLLVKQAGYHKAAELLFTAKKFNAETALQAGL 180
>pdb|3TLF|A Chain A, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3TLF|B Chain B, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3TLF|C Chain C, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3TLF|D Chain D, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3TLF|E Chain E, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3TLF|F Chain F, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
Length = 274
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 72/169 (42%), Gaps = 15/169 (8%)
Query: 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQ 60
M+ L+ Y E + + +++ G GRAFCSG DV ++ +GK + + T Q
Sbjct: 39 MITELRAAYHEAENDDRVWLLVVTGTGRAFCSGADV---KEIPEDGKVIYERPYLSTYDQ 95
Query: 61 FVYLQ------GTFVKPHVAILDGITMGCGAGISLQGMYRVV--TDKTVFSNPETQMGFH 112
+ Q T KP + ++GI CGAG+ +V +++ F +P +G
Sbjct: 96 WEAPQEGTPPFRTMAKPVLTAVNGIC--CGAGMDWVTTTDIVIASEQATFFDPHVSIGLV 153
Query: 113 PDAGASFYLSHLPGYLGEYLALTG--EKLNGVEMIACGLATHYTLNGRL 159
LP + +AL G E+++ GL + + RL
Sbjct: 154 AGRELVRVSRVLPRSIALRMALMGKHERMSAQRAYELGLISEIVEHDRL 202
>pdb|2F6Q|A Chain A, The Crystal Structure Of Human Peroxisomal Delta3, Delta2
Enoyl Coa Isomerase (Peci)
pdb|2F6Q|B Chain B, The Crystal Structure Of Human Peroxisomal Delta3, Delta2
Enoyl Coa Isomerase (Peci)
pdb|2F6Q|C Chain C, The Crystal Structure Of Human Peroxisomal Delta3, Delta2
Enoyl Coa Isomerase (Peci)
Length = 280
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 7/135 (5%)
Query: 21 VLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGIT 80
++ G G + SG D+ + G E KN L +FV F KP +A+++G
Sbjct: 73 TVLTGNGDYYSSGNDLTNFTDIPPGGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPA 132
Query: 81 MGCGAGISLQGMYRVV--TDKTVFSNPETQMGFHPDAGASFYLSHL--PGYLGEYLALTG 136
+G ++L G++ V +D+ F P + +G P+ +S+ + P E L + G
Sbjct: 133 VGI--SVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIXSPAKATEXL-IFG 189
Query: 137 EKLNGVEMIACGLAT 151
+KL E A GL T
Sbjct: 190 KKLTAGEACAQGLVT 204
>pdb|3MOY|A Chain A, Crystal Structure Of Probable Enoyl-Coa Hydratase From
Mycob Smegmatis
Length = 263
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 9/143 (6%)
Query: 12 WEENPDIGFVLMKGAGRAFCSGGDVIALYQLL-NEGKFEDFKNFFETLYQFVYLQGTFVK 70
++ + +IG +++ G+ RAF +G D+ + L ++ + + + +++L Q K
Sbjct: 49 FDADLEIGAIVVTGSERAFAAGADIAEMVTLTPHQARERNLLSGWDSLTQ-------VRK 101
Query: 71 PHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYLGE 130
P VA + G +G G +++ + D F PE +G P G + L+ G
Sbjct: 102 PIVAAVAGYALGGGCELAMLCDLVIAADTARFGQPEITLGILPGLGGTQRLTRAVGKAKA 161
Query: 131 Y-LALTGEKLNGVEMIACGLATH 152
L LTG L E GL +
Sbjct: 162 MDLCLTGRSLTAEEAERVGLVSR 184
>pdb|3KQF|A Chain A, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis.
pdb|3KQF|B Chain B, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis.
pdb|3KQF|C Chain C, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis.
pdb|3KQF|D Chain D, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis.
pdb|3KQF|E Chain E, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis.
pdb|3KQF|F Chain F, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis
Length = 265
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 6/138 (4%)
Query: 14 ENPDIGFVLMKGAG-RAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPH 72
E + V++ GAG +AFC+G D + NE + + T + V +P
Sbjct: 50 EEANTRVVILTGAGEKAFCAGAD-LKERAGXNEEQVRHAVSXIRTTXEXVE---QLPQPV 105
Query: 73 VAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGY-LGEY 131
+A ++GI +G G +SL +R+ + ET + P AG + L L G +
Sbjct: 106 IAAINGIALGGGTELSLACDFRIAAESASLGLTETTLAIIPGAGGTQRLPRLIGVGRAKE 165
Query: 132 LALTGEKLNGVEMIACGL 149
L TG +++ E GL
Sbjct: 166 LIYTGRRISAQEAKEYGL 183
>pdb|3QK8|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa15 From
Mycobacterium Marinum In Complex With An Unknown Ligand
pdb|3QK8|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase Echa15 From
Mycobacterium Marinum In Complex With An Unknown Ligand
pdb|3QK8|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase Echa15 From
Mycobacterium Marinum In Complex With An Unknown Ligand
pdb|3QK8|D Chain D, Crystal Structure Of Enoyl-Coa Hydratase Echa15 From
Mycobacterium Marinum In Complex With An Unknown Ligand
pdb|3QK8|E Chain E, Crystal Structure Of Enoyl-Coa Hydratase Echa15 From
Mycobacterium Marinum In Complex With An Unknown Ligand
pdb|3QK8|F Chain F, Crystal Structure Of Enoyl-Coa Hydratase Echa15 From
Mycobacterium Marinum In Complex With An Unknown Ligand
Length = 272
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 10/152 (6%)
Query: 6 KRLYESW---EENPDIGFVLMKGAGRAFCSGGDVIALYQLLNE--GKFEDFKNFFETLYQ 60
+ L + W + +PD+ VL++G G+AF SGG ++L++E G +E
Sbjct: 43 RDLADVWPVIDRDPDVRVVLVRGEGKAFSSGGS----FELIDETIGDYEGRIRIMREARD 98
Query: 61 FVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFY 120
V KP V+ + G +G G ++L V + + T++G A+
Sbjct: 99 LVLNLVNLDKPVVSAIRGPAVGAGLVVALLADISVASATAKIIDGHTKLGVAAGDHAAIC 158
Query: 121 LSHLPGYL-GEYLALTGEKLNGVEMIACGLAT 151
L G +Y LT E L+G E GL +
Sbjct: 159 WPLLVGMAKAKYYLLTCETLSGEEAERIGLVS 190
>pdb|4FZW|A Chain A, Crystal Structure Of The Paaf-paag Hydratase-isomerase
Complex From E.coli
pdb|4FZW|B Chain B, Crystal Structure Of The Paaf-paag Hydratase-isomerase
Complex From E.coli
Length = 258
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 58/144 (40%), Gaps = 9/144 (6%)
Query: 10 ESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFK-NFFETLYQFVYLQGTF 68
E+ + I ++ G R F +G D LNE +D +T Q F
Sbjct: 42 EAAATDTSISVCVITGNARFFAAGAD-------LNEMAEKDLAATLNDTRPQLWARLQAF 94
Query: 69 VKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPG-Y 127
KP +A ++G +G G ++L V + F PE +G P AG + L G
Sbjct: 95 NKPLIAAVNGYALGAGCELALLCDVVVAGENARFGLPEITLGIMPGAGGTQRLIRSVGKS 154
Query: 128 LGEYLALTGEKLNGVEMIACGLAT 151
L + L+GE + + GL +
Sbjct: 155 LASKMVLSGESITAQQAQQAGLVS 178
>pdb|1NZY|B Chain B, 4-Chlorobenzoyl Coenzyme A Dehalogenase From Pseudomonas
Sp. Strain Cbs-3
Length = 269
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 52/118 (44%), Gaps = 7/118 (5%)
Query: 13 EENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFET----LYQFVYLQGTF 68
EE+ +G V++ GA AFC+G L ++ + ++ F +Q ++
Sbjct: 43 EEDDSVGAVMITGAEDAFCAG---FYLREIPLDKGVAGVRDHFRIAALWWHQMIHKIIRV 99
Query: 69 VKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPG 126
+P +A ++G+ G G GISL + D F +G D S+ L+ + G
Sbjct: 100 KRPVLAAINGVAAGGGLGISLASDMAICADSAKFVCAWHTIGIGNDTATSYSLARIVG 157
>pdb|1NZY|A Chain A, 4-Chlorobenzoyl Coenzyme A Dehalogenase From Pseudomonas
Sp. Strain Cbs-3
pdb|1NZY|C Chain C, 4-Chlorobenzoyl Coenzyme A Dehalogenase From Pseudomonas
Sp. Strain Cbs-3
Length = 269
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 52/118 (44%), Gaps = 7/118 (5%)
Query: 13 EENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFET----LYQFVYLQGTF 68
EE+ +G V++ GA AFC+G L ++ + ++ F +Q ++
Sbjct: 43 EEDDSVGAVMITGAEDAFCAG---FYLREIPLDKGVAGVRDHFRIAALWWHQMIHKIIRV 99
Query: 69 VKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPG 126
+P +A ++G+ G G GISL + D F +G D S+ L+ + G
Sbjct: 100 KRPVLAAINGVAAGGGLGISLASDMAICADSAKFVCAWHTIGIGNDTATSYSLARIVG 157
>pdb|3PEA|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
pdb|3PEA|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
pdb|3PEA|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
pdb|3PEA|D Chain D, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
pdb|3PEA|E Chain E, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
pdb|3PEA|F Chain F, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
Length = 261
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 59/146 (40%), Gaps = 10/146 (6%)
Query: 8 LYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGT 67
L + E++ +I V++ G GR F +G D+ + + + + ++ V
Sbjct: 40 LIDQVEKDDNIRVVVIHGEGRFFSAGADIKEFTSVTEAKQATELAQLGQVTFERVE---K 96
Query: 68 FVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGY 127
KP +A + G +G G + R T+ PE +G P + LP Y
Sbjct: 97 CSKPVIAAIHGAALGGGLEFAXSCHXRFATESAKLGLPELTLGLIPGFAGT---QRLPRY 153
Query: 128 LGEYLA----LTGEKLNGVEMIACGL 149
+G+ A LT + G E + GL
Sbjct: 154 VGKAKACEXXLTSTPITGAEALKWGL 179
>pdb|2A7K|A Chain A, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A7K|B Chain B, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A7K|C Chain C, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A7K|D Chain D, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A7K|E Chain E, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A7K|F Chain F, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A7K|G Chain G, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A7K|H Chain H, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A7K|I Chain I, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A81|A Chain A, Carboxymethylproline Synthase (Carb) From Pectobacterium
Carotovora, Complexed With Acetyl Coa And Bicine
pdb|2A81|B Chain B, Carboxymethylproline Synthase (Carb) From Pectobacterium
Carotovora, Complexed With Acetyl Coa And Bicine
pdb|2A81|C Chain C, Carboxymethylproline Synthase (Carb) From Pectobacterium
Carotovora, Complexed With Acetyl Coa And Bicine
Length = 250
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 3/98 (3%)
Query: 21 VLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGIT 80
V+ GA R+F +GGD + QL E++ + LYQ V KP +A +DG
Sbjct: 49 VVYGGAERSFSAGGDFNEVKQLSRSEDIEEWIDRVIDLYQAVL---NVNKPTIAAVDGYA 105
Query: 81 MGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGAS 118
+G G +L R++ F PE + G GA+
Sbjct: 106 IGMGFQFALMFDQRLMASTANFVMPELKHGIGCSVGAA 143
>pdb|1JXZ|A Chain A, Structure Of The H90q Mutant Of 4-Chlorobenzoyl-Coenzyme A
Dehalogenase Complexed With 4-Hydroxybenzoyl-Coenzyme A
(Product)
pdb|1JXZ|B Chain B, Structure Of The H90q Mutant Of 4-Chlorobenzoyl-Coenzyme A
Dehalogenase Complexed With 4-Hydroxybenzoyl-Coenzyme A
(Product)
pdb|1JXZ|C Chain C, Structure Of The H90q Mutant Of 4-Chlorobenzoyl-Coenzyme A
Dehalogenase Complexed With 4-Hydroxybenzoyl-Coenzyme A
(Product)
Length = 269
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 51/118 (43%), Gaps = 7/118 (5%)
Query: 13 EENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFET----LYQFVYLQGTF 68
EE+ +G V++ GA AFC+G L ++ + ++ F Q ++
Sbjct: 43 EEDDSVGAVMITGAEDAFCAG---FYLREIPLDKGVAGVRDHFRIAALWWQQMIHKIIRV 99
Query: 69 VKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPG 126
+P +A ++G+ G G GISL + D F +G D S+ L+ + G
Sbjct: 100 KRPVLAAINGVAAGGGLGISLASDMAICADSAKFVCAWHTIGIGNDTATSYSLARIVG 157
>pdb|3HE2|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
pdb|3HE2|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
pdb|3HE2|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
Length = 264
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 84/213 (39%), Gaps = 37/213 (17%)
Query: 21 VLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGIT 80
+++ G G AFC+G D L + D+ + L++ + P V ++G
Sbjct: 68 IVLTGQGTAFCAGAD------LSGDAFAADYPDRLIELHKAM---DASPMPVVGAINGPA 118
Query: 81 MGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGY-LGEYLALTGEKL 139
+G G +++Q RVV F P ++ G D + LS L G+ + L+ EKL
Sbjct: 119 IGAGLQLAMQCDLRVVAPDAFFQFPTSKYGLALDNWSIRRLSSLVGHGRARAMLLSAEKL 178
Query: 140 NGVEMIACGLATHY-TLN---------GRL-PLVEERVGKLITDDPSIIETSLAQYGDLV 188
+ G+A TL RL PL + +++ DD +I E A
Sbjct: 179 TAEIALHTGMANRIGTLADAQAWAAEIARLAPLAIQHAKRVLNDDGAIEEAWPAHK---- 234
Query: 189 SLDRESVLRKIETIDKCF-SHDTIEEIIDALEN 220
E DK + S D IE + +E
Sbjct: 235 -----------ELFDKAWGSQDVIEAQVARMEK 256
>pdb|1WDK|A Chain A, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form I (Native2)
pdb|1WDK|B Chain B, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form I (Native2)
pdb|1WDL|A Chain A, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form Ii (Native4)
pdb|1WDL|B Chain B, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form Ii (Native4)
pdb|1WDM|A Chain A, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form I (Native3)
pdb|1WDM|B Chain B, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form I (Native3)
pdb|2D3T|A Chain A, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form V
pdb|2D3T|B Chain B, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form V
Length = 715
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 11/78 (14%)
Query: 71 PHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYLGE 130
P VA ++GI +G G + L +RV+ D PE ++G +P G + L L G
Sbjct: 105 PTVAAINGIALGGGLEMCLAADFRVMADSAKIGLPEVKLGIYPGFGGTVRLPRLIGV--- 161
Query: 131 YLALTGEKLNGVEMIACG 148
N VE IA G
Sbjct: 162 --------DNAVEWIASG 171
>pdb|4DI1|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa17 From
Mycobacterium Marinum
pdb|4DI1|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase Echa17 From
Mycobacterium Marinum
pdb|4DI1|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase Echa17 From
Mycobacterium Marinum
Length = 277
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 52/134 (38%), Gaps = 5/134 (3%)
Query: 17 DIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAIL 76
DIG V++ G F +G D+ L L + + + KP VA +
Sbjct: 67 DIGAVVLFGGHEIFSAGDDMPELRTL----NAPEADTAARVRLEAIDAVAAIPKPTVAAV 122
Query: 77 DGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPG-YLGEYLALT 135
G +G G ++L +RV D F E G P G L+ + G + L +
Sbjct: 123 TGYALGAGLTLALAADWRVSGDNVKFGATEILAGLIPGGGGMGRLTRVVGSSRAKELVFS 182
Query: 136 GEKLNGVEMIACGL 149
G + E +A GL
Sbjct: 183 GRFFDAEEALALGL 196
>pdb|2VX2|A Chain A, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|B Chain B, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|C Chain C, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|D Chain D, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|E Chain E, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|F Chain F, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|G Chain G, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|H Chain H, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|I Chain I, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
Length = 287
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/154 (20%), Positives = 59/154 (38%), Gaps = 3/154 (1%)
Query: 17 DIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAIL 76
D+ +++ G F SG D L +L E + F+T + + P +A++
Sbjct: 77 DLKVIIISAEGPVFSSGHD---LKELTEEQGRDYHAEVFQTCSKVMMHIRNHPVPVIAMV 133
Query: 77 DGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYLGEYLALTG 136
+G+ G + V +DK+ F+ P +G +P + + TG
Sbjct: 134 NGLATAAGCQLVASCDIAVASDKSSFATPGVNVGLFCSTPGVALARAVPRKVALEMLFTG 193
Query: 137 EKLNGVEMIACGLATHYTLNGRLPLVEERVGKLI 170
E ++ E + GL + L R+ + I
Sbjct: 194 EPISAQEALLHGLLSKVVPEAELQEETMRIARKI 227
>pdb|3LKE|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Halodurans
pdb|3LKE|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Halodurans
pdb|3LKE|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Halodurans
Length = 263
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 68/155 (43%), Gaps = 8/155 (5%)
Query: 70 KPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYLG 129
K VA+++G G G + L R+ + F +MG PD GAS++L + GY
Sbjct: 102 KVTVALINGYAYGGGFNMMLACDRRIALRRAKFLENFHKMGISPDLGASYFLPRIIGYEQ 161
Query: 130 EY-LALTGEKLNGVEMIACGLATHYTLNGRLPLVEERVG---KLITDD--PSIIETSLAQ 183
L L G+ E + GL N + ++ERV K +++ P+I T
Sbjct: 162 TMNLLLEGKLFTSEEALRLGLIQEICENKQ--ELQERVKNYLKAVSEGYVPAIAATKKLL 219
Query: 184 YGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDAL 218
G ++ + ++ E + F I++ ++AL
Sbjct: 220 KGKAAEELKQQLEQETEELVALFKQTEIKKRLEAL 254
>pdb|4ELS|A Chain A, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Bicarbonate
pdb|4ELS|B Chain B, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Bicarbonate
pdb|4ELS|C Chain C, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Bicarbonate
pdb|4ELS|D Chain D, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Bicarbonate
pdb|4ELS|E Chain E, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Bicarbonate
pdb|4ELS|F Chain F, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Bicarbonate
pdb|4ELW|A Chain A, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Nitrate
pdb|4ELW|B Chain B, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Nitrate
pdb|4ELW|C Chain C, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Nitrate
pdb|4ELW|D Chain D, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Nitrate
pdb|4ELW|E Chain E, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Nitrate
pdb|4ELW|F Chain F, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Nitrate
pdb|4ELX|A Chain A, Structure Of Apo E.Coli. 1,4-Dihydroxy-2- Naphthoyl Coa
Synthases With Cl
pdb|4ELX|B Chain B, Structure Of Apo E.Coli. 1,4-Dihydroxy-2- Naphthoyl Coa
Synthases With Cl
pdb|4ELX|C Chain C, Structure Of Apo E.Coli. 1,4-Dihydroxy-2- Naphthoyl Coa
Synthases With Cl
pdb|4ELX|D Chain D, Structure Of Apo E.Coli. 1,4-Dihydroxy-2- Naphthoyl Coa
Synthases With Cl
pdb|4ELX|E Chain E, Structure Of Apo E.Coli. 1,4-Dihydroxy-2- Naphthoyl Coa
Synthases With Cl
pdb|4ELX|F Chain F, Structure Of Apo E.Coli. 1,4-Dihydroxy-2- Naphthoyl Coa
Synthases With Cl
Length = 285
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 9/114 (7%)
Query: 17 DIGFVLMKGAG-RAFCSGGD--VIALYQLLNEGKFEDFKNFFE-TLYQFVYLQGTFVKPH 72
+IG +++ GAG +AFCSGGD V Y G ++D + F T KP
Sbjct: 68 NIGVIILTGAGDKAFCSGGDQKVRGDY-----GGYKDDSGVHHLNVLDFQRQIRTCPKPV 122
Query: 73 VAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPG 126
VA++ G ++G G + + + D +F ++G + Y++ + G
Sbjct: 123 VAMVAGYSIGGGHVLHMMCDLTIAADNAIFGQTGPKVGSFDGGWGASYMARIVG 176
>pdb|3T88|A Chain A, Crystal Structure Of Escherichia Coli Menb In Complex With
Substrate Analogue, Osb-Ncoa
pdb|3T88|B Chain B, Crystal Structure Of Escherichia Coli Menb In Complex With
Substrate Analogue, Osb-Ncoa
pdb|3T88|C Chain C, Crystal Structure Of Escherichia Coli Menb In Complex With
Substrate Analogue, Osb-Ncoa
pdb|3T88|D Chain D, Crystal Structure Of Escherichia Coli Menb In Complex With
Substrate Analogue, Osb-Ncoa
pdb|3T88|E Chain E, Crystal Structure Of Escherichia Coli Menb In Complex With
Substrate Analogue, Osb-Ncoa
pdb|3T88|F Chain F, Crystal Structure Of Escherichia Coli Menb In Complex With
Substrate Analogue, Osb-Ncoa
pdb|3T89|A Chain A, Crystal Structure Of Escherichia Coli Menb, The
1,4-Dihydroxy-2- Naphthoyl-Coa Synthase In Vitamin K2
Biosynthesis
pdb|3T89|B Chain B, Crystal Structure Of Escherichia Coli Menb, The
1,4-Dihydroxy-2- Naphthoyl-Coa Synthase In Vitamin K2
Biosynthesis
pdb|3T89|C Chain C, Crystal Structure Of Escherichia Coli Menb, The
1,4-Dihydroxy-2- Naphthoyl-Coa Synthase In Vitamin K2
Biosynthesis
pdb|3T89|D Chain D, Crystal Structure Of Escherichia Coli Menb, The
1,4-Dihydroxy-2- Naphthoyl-Coa Synthase In Vitamin K2
Biosynthesis
pdb|3T89|E Chain E, Crystal Structure Of Escherichia Coli Menb, The
1,4-Dihydroxy-2- Naphthoyl-Coa Synthase In Vitamin K2
Biosynthesis
pdb|3T89|F Chain F, Crystal Structure Of Escherichia Coli Menb, The
1,4-Dihydroxy-2- Naphthoyl-Coa Synthase In Vitamin K2
Biosynthesis
Length = 289
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 9/114 (7%)
Query: 17 DIGFVLMKGAG-RAFCSGGD--VIALYQLLNEGKFEDFKNFFE-TLYQFVYLQGTFVKPH 72
+IG +++ GAG +AFCSGGD V Y G ++D + F T KP
Sbjct: 72 NIGVIILTGAGDKAFCSGGDQKVRGDY-----GGYKDDSGVHHLNVLDFQRQIRTCPKPV 126
Query: 73 VAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPG 126
VA++ G ++G G + + + D +F ++G + Y++ + G
Sbjct: 127 VAMVAGYSIGGGHVLHMMCDLTIAADNAIFGQTGPKVGSFDGGWGASYMARIVG 180
>pdb|3TRR|A Chain A, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3TRR|B Chain B, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3TRR|C Chain C, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3TRR|D Chain D, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3TRR|E Chain E, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3TRR|F Chain F, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
Length = 256
Score = 35.4 bits (80), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 66/175 (37%), Gaps = 18/175 (10%)
Query: 5 LKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQ---LLNEGKFEDFKNFFETLYQF 61
L + + + D+ ++ GAG FC+G D+ A +L+E + F N
Sbjct: 39 LAAAADQLDSSADLSVAIITGAGGNFCAGMDLKAFVSGEAVLSE-RGLGFTNVPPR---- 93
Query: 62 VYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYL 121
KP +A ++G + G + L V F PE + G AG L
Sbjct: 94 --------KPIIAAVEGFALAGGTELVLSCDLVVAGRSAKFGIPEVKRGLVAGAGGLLRL 145
Query: 122 -SHLPGYLGEYLALTGEKLNGVEMIACGLATHYTLNGR-LPLVEERVGKLITDDP 174
+ +P + LALTGE + G +G+ L E K+ + P
Sbjct: 146 PNRIPYQVAMELALTGESFTAEDAAKYGFINRLVDDGQALDTALELAAKITANGP 200
>pdb|3SLL|A Chain A, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3SLL|B Chain B, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3SLL|C Chain C, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3SLL|D Chain D, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3SLL|E Chain E, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3SLL|F Chain F, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
Length = 290
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 60/154 (38%), Gaps = 9/154 (5%)
Query: 6 KRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFK---NFFETLYQFV 62
K++ + D+ V++ GAG+ FCSG D + + + G E L + +
Sbjct: 57 KQMLVDISHDNDVRAVVITGAGKGFCSGADQKSAGPIPHIGGLTQPTIALRSMELLDEVI 116
Query: 63 YLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLS 122
+P +A ++G +G G ++L RV + F G YL
Sbjct: 117 LTLRRMHQPVIAAINGAAIGGGLCLALACDVRVASQDAYFRAAGINNGLTASELGLSYL- 175
Query: 123 HLPGYLGEYLA----LTGEKLNGVEMIACGLATH 152
LP +G A LTG ++ E GL +
Sbjct: 176 -LPRAIGTSRASDIMLTGRDVDADEAERIGLVSR 208
>pdb|3NJB|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Smegmatis, Iodide Soak
pdb|3NJB|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Smegmatis, Iodide Soak
pdb|3NJD|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
pdb|3NJD|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
Length = 333
Score = 34.7 bits (78), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 72/195 (36%), Gaps = 32/195 (16%)
Query: 5 LKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLN-------------EGKFEDF 51
L L E + +PD+ +L+ G G FC+G D+ A + + GK +
Sbjct: 67 LSALVERADLDPDVHVILVSGRGEGFCAGFDLSAYAEGSSSAGGGSPYEGTVLSGKTQAL 126
Query: 52 KNF----------FETLYQFVYLQGTFV---KPHVAILDGITMGCGAGISLQGMYRVVTD 98
+ ++ + +FV + + KP V + G + G I+L +
Sbjct: 127 NHLPDEPWDPMVDYQMMSRFVRGFASLMHCDKPTVVKIHGYCVAGGTDIALHADQVIAAA 186
Query: 99 KTVFSNPETQMGFHPDAGASFYLSHLPGYLGEYLALTGEKLNGVEMIACGLATHYT---- 154
P ++ P AG + L + L TG+ + G + GLA
Sbjct: 187 DAKIGYPPMRVWGVPAAG--LWAHRLGDQRAKRLLFTGDCITGAQAAEWGLAVEAPDPAD 244
Query: 155 LNGRLPLVEERVGKL 169
L+ R + ER+ +
Sbjct: 245 LDARTERLVERIAAM 259
>pdb|1HNO|A Chain A, Crystal Structure Of Peroxisomal Delta3-delta2-enoyl-coa
Isomerase From Saccharomyces Cerevisiae
pdb|1HNU|A Chain A, Crystal Structure Of Peroxisomal Delta3-Delta2-Enoyl-Coa
Isomerase From Saccharomyces Cerevisiae
pdb|1K39|A Chain A, The Structure Of Yeast Delta3-delta2-enoyl-coa Isomerase
Complexed With Octanoyl-coa
pdb|1K39|B Chain B, The Structure Of Yeast Delta3-delta2-enoyl-coa Isomerase
Complexed With Octanoyl-coa
pdb|1K39|C Chain C, The Structure Of Yeast Delta3-delta2-enoyl-coa Isomerase
Complexed With Octanoyl-coa
pdb|1PJH|A Chain A, Structural Studies On Delta3-Delta2-Enoyl-Coa Isomerase:
The Variable Mode Of Assembly Of The Trimeric Disks Of
The Crotonase Superfamily
pdb|1PJH|B Chain B, Structural Studies On Delta3-Delta2-Enoyl-Coa Isomerase:
The Variable Mode Of Assembly Of The Trimeric Disks Of
The Crotonase Superfamily
pdb|1PJH|C Chain C, Structural Studies On Delta3-Delta2-Enoyl-Coa Isomerase:
The Variable Mode Of Assembly Of The Trimeric Disks Of
The Crotonase Superfamily
Length = 280
Score = 34.7 bits (78), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 8/125 (6%)
Query: 5 LKRLYESWEENPDIGFVLMKGAGRAFCSGGDV--IALYQLLNEGKF--EDFKNFFETLYQ 60
L L E + N D+ F +++ +GR F SG D IA Q + K+ E K + +
Sbjct: 41 LGELLELADRNRDVYFTIIQSSGRFFSSGADFKGIAKAQGDDTNKYPSETSKWVSNFVAR 100
Query: 61 FVYLQGTFVKPH---VAILDGITMGCGAG-ISLQGMYRVVTDKTVFSNPETQMGFHPDAG 116
VY+ F+K + L+G +G A ++L + + DK P +G + G
Sbjct: 101 NVYVTDAFIKHSKVLICCLNGPAIGLSAALVALCDIVYSINDKVYLLYPFANLGLITEGG 160
Query: 117 ASFYL 121
+ L
Sbjct: 161 TTVSL 165
>pdb|3Q1T|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Avium
pdb|3Q1T|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Avium
pdb|3Q1T|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Avium
pdb|3Q1T|D Chain D, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Avium
pdb|3Q1T|E Chain E, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Avium
pdb|3Q1T|F Chain F, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Avium
Length = 278
Score = 34.7 bits (78), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 61/150 (40%), Gaps = 7/150 (4%)
Query: 5 LKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNE--GKFEDFKNFFETLYQFV 62
L ++ + +P + VL++G G+AF SGG + L++E G ++ V
Sbjct: 51 LADIWPVIDRDPAVRAVLVRGEGKAFSSGGS----FDLIDETIGDYQGRIRIMREARDLV 106
Query: 63 YLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLS 122
+ P V+ + G +G G ++L V + T++G A+
Sbjct: 107 HNMINCDTPVVSAIRGPAVGAGLVVALLADISVAGRTAKLIDGHTKLGVAAGDHAAICWP 166
Query: 123 HLPGYL-GEYLALTGEKLNGVEMIACGLAT 151
L G +Y LT E L G E GL +
Sbjct: 167 LLVGMAKAKYYLLTCETLLGEEAERIGLVS 196
>pdb|2IEX|A Chain A, Crystal Structure Of Dihydroxynapthoic Acid Synthetase
(Gk2873) From Geobacillus Kaustophilus Hta426
pdb|2IEX|B Chain B, Crystal Structure Of Dihydroxynapthoic Acid Synthetase
(Gk2873) From Geobacillus Kaustophilus Hta426
pdb|2IEX|C Chain C, Crystal Structure Of Dihydroxynapthoic Acid Synthetase
(Gk2873) From Geobacillus Kaustophilus Hta426
Length = 272
Score = 34.3 bits (77), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 53/117 (45%), Gaps = 8/117 (6%)
Query: 14 ENPDIGFVLMKGAG-RAFCSGGDVIALYQLLNEGKF--EDFKNFFETLYQFVYLQGTFVK 70
++ +IG +++ GAG +AFCSGGD ++ G + ED L L K
Sbjct: 53 DDSNIGVIILTGAGGKAFCSGGD----QKVRGHGGYVGEDEIPRLNVL-DLQRLIRVIPK 107
Query: 71 PHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGY 127
P +A++ G +G G + + + D +F ++G + YL+ + G+
Sbjct: 108 PVIAMVAGYAIGGGHVLHVVCDLTIAADNAIFGQTGPKVGSFDGGYGAGYLARIVGH 164
>pdb|4EML|A Chain A, Synechocystis Sp. Pcc 6803
1,4-Dihydroxy-2-Naphthoyl-Coenzyme A Synthase (Menb) In
Complex With Bicarbonate
pdb|4EML|B Chain B, Synechocystis Sp. Pcc 6803
1,4-Dihydroxy-2-Naphthoyl-Coenzyme A Synthase (Menb) In
Complex With Bicarbonate
pdb|4EML|C Chain C, Synechocystis Sp. Pcc 6803
1,4-Dihydroxy-2-Naphthoyl-Coenzyme A Synthase (Menb) In
Complex With Bicarbonate
pdb|4EML|D Chain D, Synechocystis Sp. Pcc 6803
1,4-Dihydroxy-2-Naphthoyl-Coenzyme A Synthase (Menb) In
Complex With Bicarbonate
pdb|4EML|E Chain E, Synechocystis Sp. Pcc 6803
1,4-Dihydroxy-2-Naphthoyl-Coenzyme A Synthase (Menb) In
Complex With Bicarbonate
pdb|4EML|F Chain F, Synechocystis Sp. Pcc 6803
1,4-Dihydroxy-2-Naphthoyl-Coenzyme A Synthase (Menb) In
Complex With Bicarbonate
Length = 275
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 55/129 (42%), Gaps = 14/129 (10%)
Query: 8 LYESW---EENPDIGFVLMKGAG------RAFCSGGDVIALYQLLNEGKFEDFKNFFE-T 57
LY+++ E+ IG VL+ GAG AFCSGGD + EG + D +
Sbjct: 42 LYDAFCNAREDNRIGVVLLTGAGPHSDGKYAFCSGGD----QSVRGEGGYIDDQGTPRLN 97
Query: 58 LYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGA 117
+ L + K +A++ G +G G + L + D +F ++G
Sbjct: 98 VLDLQRLIRSMPKVVIALVAGYAIGGGHVLHLVCDLTIAADNAIFGQTGPKVGSFDGGFG 157
Query: 118 SFYLSHLPG 126
S YL+ + G
Sbjct: 158 SSYLARIVG 166
>pdb|3G64|A Chain A, Crystal Structure Of Putative Enoyl-Coa Hydratase From
Streptomyces Coelicolor A3(2)
pdb|3G64|B Chain B, Crystal Structure Of Putative Enoyl-Coa Hydratase From
Streptomyces Coelicolor A3(2)
pdb|3G64|C Chain C, Crystal Structure Of Putative Enoyl-Coa Hydratase From
Streptomyces Coelicolor A3(2)
Length = 279
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 68/159 (42%), Gaps = 4/159 (2%)
Query: 21 VLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGIT 80
+++ G GR FCSGGDV + +F Q V P +A L G+
Sbjct: 65 LVLAGEGRGFCSGGDVDEIIGATLSXDTARLLDFNRXTGQVVRAVRECPFPVIAALHGVA 124
Query: 81 MGCGAGISLQGMYRVVTDKTVFSNPETQMGFH-PDAGASFYLSHLPGYLGEYLAL--TGE 137
G GA ++L +RV T F+ T++G D GA++ L + G LG L G+
Sbjct: 125 AGAGAVLALAADFRVADPSTRFAFLFTRVGLSGGDXGAAYLLPRVVG-LGHATRLLXLGD 183
Query: 138 KLNGVEMIACGLATHYTLNGRLPLVEERVGKLITDDPSI 176
+ E GL + T GR + + + D P++
Sbjct: 184 TVRAPEAERIGLISELTEEGRADEAARTLARRLADGPAL 222
>pdb|3MYB|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Mycobacterium
Smegm
pdb|3MYB|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase Mycobacterium
Smegm
pdb|3MYB|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase Mycobacterium
Smegm
Length = 286
Score = 32.0 bits (71), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/84 (22%), Positives = 36/84 (42%), Gaps = 3/84 (3%)
Query: 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQ 60
M+ L + + E+ + V++ +G+AFC+G D L ++ E E ++ F
Sbjct: 54 MLAALGEAFGTLAEDESVRAVVLAASGKAFCAGHD---LKEMRAEPSREYYEKLFARCTD 110
Query: 61 FVYLQGTFVKPHVAILDGITMGCG 84
+ P +A + GI G
Sbjct: 111 VMLAIQRLPAPVIARVHGIATAAG 134
>pdb|3OC7|A Chain A, Crystal Structure Of An Enoyl-Coa Hydratase From
Mycobacterium Avium
Length = 267
Score = 31.6 bits (70), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 70/179 (39%), Gaps = 18/179 (10%)
Query: 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGK-FEDFKNFFETLY 59
+V +L + +P + V++ G FC+G D L + + G + E
Sbjct: 39 LVSQLHQGLRDASSDPAVRVVVLAHTGGTFCAGAD---LSEAGSGGSPSSAYDMAVERAR 95
Query: 60 QFVYLQGTFVK---PHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAG 116
+ L V+ P +A +DG G G+ V ++ F+ E ++G P
Sbjct: 96 EMAALMRAIVESRLPVIAAIDGHVRAGGFGLVGACDIAVAGPRSSFALTEARIGVAP--- 152
Query: 117 ASFYLSHLPGYLGEYLA---LTGEKLNGVEMIACGLATHYTLNGRLPLVEERVGKLITD 172
A L+ LP A LTGEK + GL T + ++ + +L+TD
Sbjct: 153 AIISLTLLPKLSARAAARYYLTGEKFDARRAEEIGLITMAAED-----LDAAIDQLVTD 206
>pdb|2WTB|A Chain A, Arabidopsis Thaliana Multifuctional Protein, Mfp2
Length = 725
Score = 31.6 bits (70), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 1/122 (0%)
Query: 5 LKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYL 64
LK YE D+ +++ GA F SGG I+ + + +G ++ K + ++ L
Sbjct: 39 LKSNYEEALSRNDVKAIVITGAKGRF-SGGFDISGFGEMQKGNVKEPKAGYISIDIITDL 97
Query: 65 QGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHL 124
KP VA +DG+ +G G +++ R+ PE Q+G P G + L L
Sbjct: 98 LEAARKPSVAAIDGLALGGGLELAMACHARISAPAAQLGLPELQLGVIPGFGGTQRLPRL 157
Query: 125 PG 126
G
Sbjct: 158 VG 159
>pdb|3QRE|A Chain A, Crystal Structure Of An Enoyl-Coa Hydratase Echa12_1 From
Mycobacterium Marinum
Length = 298
Score = 31.6 bits (70), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 51/122 (41%), Gaps = 10/122 (8%)
Query: 13 EENPDIGFVLMKGAGRAFCSG-----GDVIALY-QLLNEGKFEDFKNFF-ETLYQFVYLQ 65
E +P I +++ G GR FC+G D A Y + + + K + + E FV +
Sbjct: 70 EADPGIRVIVLTGRGRGFCAGAYLGSADAAAGYDKTMAKAKDANLADLVGERPPHFVTM- 128
Query: 66 GTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLP 125
KP +A ++G +G G +L R F+ + G + G S+ L L
Sbjct: 129 --LRKPVIAAINGPCVGIGLTQALMCDVRFAAAGAKFAAVFARRGLIAEFGISWILPRLT 186
Query: 126 GY 127
+
Sbjct: 187 SW 188
>pdb|2QM6|A Chain A, Crystal Structure Of Helicobacter Pylori
Gamma-Glutamyltranspeptidase In Complex With Glutamate
pdb|2QM6|C Chain C, Crystal Structure Of Helicobacter Pylori
Gamma-Glutamyltranspeptidase In Complex With Glutamate
pdb|2QMC|A Chain A, Crystal Structure Of Helicobacter Pylori
Gamma-Glutamyltranspeptidase T380a Mutant
pdb|2QMC|C Chain C, Crystal Structure Of Helicobacter Pylori
Gamma-Glutamyltranspeptidase T380a Mutant
pdb|3FNM|A Chain A, Crystal Structure Of Acivicin-Inhibited
Gamma-Glutamyltranspeptidase Reveals Critical Roles For
Its C-Terminus In Autoprocessing And Catalysis
pdb|3FNM|C Chain C, Crystal Structure Of Acivicin-Inhibited
Gamma-Glutamyltranspeptidase Reveals Critical Roles For
Its C-Terminus In Autoprocessing And Catalysis
Length = 377
Score = 31.2 bits (69), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 6/103 (5%)
Query: 199 IETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKEASPLSLKVTLQS---IREG 255
+E + K + + ++ID A + Y + R+A E LKEA LK + ++G
Sbjct: 141 MEAMLKKYGTKKLSQLIDPAIKLAENGYAISQRQA-ETLKEARERFLKYSSSKKYFFKKG 199
Query: 256 R--FQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDF 296
+Q D + ++ TLN I + F +G A L++KD
Sbjct: 200 HLDYQEGDLFVQKDLAKTLNQIKTLGAKGFYQGQVAELIEKDM 242
>pdb|2NQO|A Chain A, Crystal Structure Of Helicobacter Pylori
Gamma-Glutamyltranspeptidase
pdb|2NQO|C Chain C, Crystal Structure Of Helicobacter Pylori
Gamma-Glutamyltranspeptidase
Length = 376
Score = 31.2 bits (69), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 6/103 (5%)
Query: 199 IETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKEASPLSLKVTLQS---IREG 255
+E + K + + ++ID A + Y + R+A E LKEA LK + ++G
Sbjct: 140 MEAMLKKYGTKKLSQLIDPAIKLAENGYAISQRQA-ETLKEARERFLKYSSSKKYFFKKG 198
Query: 256 R--FQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDF 296
+Q D + ++ TLN I + F +G A L++KD
Sbjct: 199 HLDYQEGDLFVQKDLAKTLNQIKTLGAKGFYQGQVAELIEKDM 241
>pdb|1RJM|A Chain A, Crystal Structure Of Menb (rv0548c) From Mycobacterium
Tuberculosis
pdb|1RJM|B Chain B, Crystal Structure Of Menb (rv0548c) From Mycobacterium
Tuberculosis
pdb|1RJM|C Chain C, Crystal Structure Of Menb (rv0548c) From Mycobacterium
Tuberculosis
pdb|1RJN|A Chain A, The Crystal Structure Of Menb (Rv0548c) From Mycobacterium
Tuberculosis In Complex With The Coa Portion Of
Naphthoyl Coa
pdb|1RJN|B Chain B, The Crystal Structure Of Menb (Rv0548c) From Mycobacterium
Tuberculosis In Complex With The Coa Portion Of
Naphthoyl Coa
pdb|1RJN|C Chain C, The Crystal Structure Of Menb (Rv0548c) From Mycobacterium
Tuberculosis In Complex With The Coa Portion Of
Naphthoyl Coa
Length = 339
Score = 31.2 bits (69), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 7/41 (17%)
Query: 2 VGRLKRLYESWEENPDIGFVLMKG-------AGRAFCSGGD 35
V L R+ + +PD+G VL+ G G AFCSGGD
Sbjct: 91 VDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGD 131
>pdb|4H0X|A Chain A, Crystal Structure Of Nad+-ia(e380a)-actin Complex
Length = 418
Score = 31.2 bits (69), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
Query: 113 PDAGASFYLSHLPGYLGEYLALTGE----KLNGVEMIACGLATHYTLNGRL 159
P YLS +PGY GEY L K+N V+ G T L+ L
Sbjct: 366 PKDSPGAYLSAIPGYAGEYAVLLNHGSKFKINKVDSYKDGTVTKLILDATL 416
>pdb|1Q51|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|D Chain D, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|E Chain E, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|F Chain F, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|G Chain G, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|H Chain H, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|I Chain I, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|J Chain J, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|K Chain K, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|L Chain L, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q52|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|D Chain D, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|E Chain E, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|F Chain F, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|G Chain G, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|H Chain H, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|I Chain I, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|J Chain J, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|K Chain K, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|L Chain L, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
Length = 314
Score = 31.2 bits (69), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 7/41 (17%)
Query: 2 VGRLKRLYESWEENPDIGFVLMKG-------AGRAFCSGGD 35
V L R+ + +PD+G VL+ G G AFCSGGD
Sbjct: 66 VDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGD 106
>pdb|3T8A|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Substrate Analogue, Osb-Ncoa
pdb|3T8A|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Substrate Analogue, Osb-Ncoa
pdb|3T8A|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Substrate Analogue, Osb-Ncoa
pdb|3T8B|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Menb With
Altered Hexameric Assembly
pdb|3T8B|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Menb With
Altered Hexameric Assembly
Length = 334
Score = 31.2 bits (69), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 7/41 (17%)
Query: 2 VGRLKRLYESWEENPDIGFVLMKG-------AGRAFCSGGD 35
V L R+ + +PD+G VL+ G G AFCSGGD
Sbjct: 86 VDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGD 126
>pdb|3QXI|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa1 From
Mycobacterium Marinum
pdb|3QXI|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase Echa1 From
Mycobacterium Marinum
pdb|3QXI|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase Echa1 From
Mycobacterium Marinum
Length = 265
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 53/129 (41%), Gaps = 10/129 (7%)
Query: 22 LMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITM 81
++ GAG +FC+G D+ A F +N + + KP +A ++G +
Sbjct: 64 ILTGAGGSFCAGMDLKA---------FARGENVVVEGRGLGFTERPPAKPLIAAVEGYAL 114
Query: 82 GCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYL-SHLPGYLGEYLALTGEKLN 140
G ++L V + F PE + G G L +P + LALTG+ L+
Sbjct: 115 AGGTELALATDLIVAARDSAFGIPEVKRGLVAGGGGLLRLPERIPYAIAMELALTGDNLS 174
Query: 141 GVEMIACGL 149
A G+
Sbjct: 175 AERAHALGM 183
>pdb|4H0Y|A Chain A, Crystal Structure Of Nad+-ia(e380s)-actin Complex
Length = 418
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
Query: 113 PDAGASFYLSHLPGYLGEYLALTGE----KLNGVEMIACGLATHYTLNGRL 159
P YLS +PGY GEY L K+N V+ G T L+ L
Sbjct: 366 PKDSPGAYLSAIPGYAGEYSVLLNHGSKFKINKVDSYKDGTVTKLILDATL 416
>pdb|1GIQ|A Chain A, Crystal Structure Of The Enzymatic Componet Of Iota-Toxin
From Clostridium Perfringens With Nadh
pdb|1GIQ|B Chain B, Crystal Structure Of The Enzymatic Componet Of Iota-Toxin
From Clostridium Perfringens With Nadh
pdb|1GIR|A Chain A, Crystal Structure Of The Enzymatic Componet Of Iota-Toxin
From Clostridium Perfringens With Nadph
pdb|3BUZ|A Chain A, Crystal Structure Of Ia-Btad-Actin Complex
Length = 413
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
Query: 113 PDAGASFYLSHLPGYLGEYLALTGE----KLNGVEMIACGLATHYTLNGRL 159
P YLS +PGY GEY L K+N V+ G T L+ L
Sbjct: 361 PKDSPGAYLSAIPGYAGEYEVLLNHGSKFKINKVDSYKDGTVTKLILDATL 411
>pdb|4HC8|A Chain A, Crystal Structure Of Probable Enoyl-Coa Hydratase Echa3
(Rv0632c, Nysgrc-019494) From Mycobacterium Tuberculosis
H37rv
pdb|4HC8|B Chain B, Crystal Structure Of Probable Enoyl-Coa Hydratase Echa3
(Rv0632c, Nysgrc-019494) From Mycobacterium Tuberculosis
H37rv
Length = 255
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Query: 17 DIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAIL 76
D+G +++ G GR F G D+ ++L G+ + + ++ Y ++ KP V
Sbjct: 47 DVGALVITGNGRVFSGGFDL----KILTSGEVQPAIDXLRGGFELAYRLLSYPKPVVXAC 102
Query: 77 DGITMGCGAGISLQGMYRVVTDKTVFSNPETQMG 110
G + GA + G +RV E +G
Sbjct: 103 TGHAIAXGAFLLSCGDHRVAAHAYNIQANEVAIG 136
>pdb|4GY2|A Chain A, Crystal Structure Of Apo-ia-actin Complex
pdb|4H03|A Chain A, Crystal Structure Of Nad+-ia-actin Complex
pdb|4H0T|A Chain A, Crystal Structure Of Ia-adpr-actin Complex
Length = 418
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
Query: 113 PDAGASFYLSHLPGYLGEYLALTGE----KLNGVEMIACGLATHYTLNGRL 159
P YLS +PGY GEY L K+N V+ G T L+ L
Sbjct: 366 PKDSPGAYLSAIPGYAGEYEVLLNHGSKFKINKVDSYKDGTVTKLILDATL 416
>pdb|4FZW|C Chain C, Crystal Structure Of The Paaf-paag Hydratase-isomerase
Complex From E.coli
pdb|4FZW|D Chain D, Crystal Structure Of The Paaf-paag Hydratase-isomerase
Complex From E.coli
Length = 274
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 73/177 (41%), Gaps = 3/177 (1%)
Query: 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQ 60
M +L + E + I +L+ GAGR FC+G D + + G D E Y
Sbjct: 43 MHAQLAECLKQVERDDTIRCLLLTGAGRGFCAGQD-LNDRNVDPTGPAPDLGMSVERFYN 101
Query: 61 -FVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASF 119
V KP + ++G+ G GA ++L G + F +++G PD G ++
Sbjct: 102 PLVRRLAKLPKPVICAVNGVAAGAGATLALGGDIVIAARSAKFVMAFSKLGLIPDCGGTW 161
Query: 120 YLSHLPGYLGEY-LALTGEKLNGVEMIACGLATHYTLNGRLPLVEERVGKLITDDPS 175
L + G LAL G +L+ + G+ + L +++ + + P+
Sbjct: 162 LLPRVAGRARAMGLALLGNQLSAEQAHEWGMIWQVVDDETLADTAQQLARHLATQPT 218
>pdb|3H02|A Chain A, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate
Synthase From Salmonella Typhimurium.
pdb|3H02|B Chain B, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate
Synthase From Salmonella Typhimurium.
pdb|3H02|C Chain C, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate
Synthase From Salmonella Typhimurium.
pdb|3H02|D Chain D, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate
Synthase From Salmonella Typhimurium.
pdb|3H02|E Chain E, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate
Synthase From Salmonella Typhimurium.
pdb|3H02|F Chain F, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate
Synthase From Salmonella Typhimurium
Length = 288
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 48/108 (44%), Gaps = 10/108 (9%)
Query: 17 DIGFVLMKGAG-RAFCSGGD--VIALYQLLNEGKFEDFKNFFE-TLYQFVYLQGTFVKPH 72
++G +++ G G +AFC+GGD V Y G ++D + F T KP
Sbjct: 71 NVGVIILTGEGDKAFCAGGDQKVRGDY-----GGYQDDSGVHHLNVLDFQRQIRTCPKPV 125
Query: 73 VAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMG-FHPDAGASF 119
VA + G ++G G + + + +F ++G F GAS+
Sbjct: 126 VAXVAGYSIGGGHVLHXXCDLTIAAENAIFGQTGPKVGSFDGGWGASY 173
>pdb|1BS2|A Chain A, Yeast Arginyl-Trna Synthetase
pdb|1F7U|A Chain A, Crystal Structure Of The Arginyl-trna Synthetase Complexed
With The Trna(arg) And L-arg
pdb|1F7V|A Chain A, Crystal Structure Of Yeast Arginyl-Trna Synthetase
Complexed With The Trnaarg
Length = 607
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 46/116 (39%), Gaps = 19/116 (16%)
Query: 126 GYLGEYLALTGEKLNGVEMIACGLATHYTLNGRLPLVEERVGKLITDDPSIIETSLAQYG 185
G G YL +L VE A G+ +N L++E KL+ L QY
Sbjct: 483 GDTGPYLQYAHSRLRSVERNASGITQEKWINADFSLLKEPAAKLLI-------RLLGQYP 535
Query: 186 DLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDV-WCRKAVEKLKEA 240
D++ R ++ K T+ + L ++ +S YDV W E+L A
Sbjct: 536 DVL---RNAI--------KTHEPTTVVTYLFKLTHQVSSCYDVLWVAGQTEELATA 580
>pdb|2WN6|A Chain A, Structural Basis For Substrate Recognition In The
Enzymatic Component Of Adp-Ribosyltransferase Toxin Cdta
From Clostridium Difficile
Length = 463
Score = 28.9 bits (63), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
Query: 113 PDAGASFYLSHLPGYLGEYLALTGE----KLNGVEMIACGLATHYTLNGRL 159
P YLS +PGY GEY L K+N ++ G T ++ L
Sbjct: 411 PKGSPGAYLSAIPGYAGEYEVLLNHGSKFKINKIDSYKDGTITKLIVDATL 461
>pdb|2WN4|A Chain A, Structural Basis For Substrate Recognition In The
Enzymatic Component Of Adp-Ribosyltransferase Toxin Cdta
From Clostridium Difficile
pdb|2WN5|A Chain A, Structural Basis For Substrate Recognition In The
Enzymatic Component Of Adp-Ribosyltransferase Toxin Cdta
From Clostridium Difficile
pdb|2WN7|A Chain A, Structural Basis For Substrate Recognition In The
Enzymatic Component Of Adp-Ribosyltransferase Toxin Cdta
From Clostridium Difficile
pdb|2WN8|A Chain A, Structural Basis For Substrate Recognition In The
Enzymatic Component Of Adp-Ribosyltransferase Toxin Cdta
From Clostridium Difficile
Length = 463
Score = 28.9 bits (63), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
Query: 113 PDAGASFYLSHLPGYLGEYLALTGE----KLNGVEMIACGLATHYTLNGRL 159
P YLS +PGY GEY L K+N ++ G T ++ L
Sbjct: 411 PKGSPGAYLSAIPGYAGEYEVLLNHGSKFKINKIDSYKDGTITKLIVDATL 461
>pdb|3QKA|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From
Mycobacterium Marinum
pdb|3QKA|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From
Mycobacterium Marinum
pdb|3QKA|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From
Mycobacterium Marinum
pdb|3QKA|D Chain D, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From
Mycobacterium Marinum
pdb|3QKA|E Chain E, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From
Mycobacterium Marinum
pdb|3QKA|F Chain F, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From
Mycobacterium Marinum
Length = 261
Score = 28.5 bits (62), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 55/160 (34%), Gaps = 25/160 (15%)
Query: 9 YESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQG-- 66
+ ++ + ++ G G FC+G D K F V+ G
Sbjct: 44 FAEFDRDESASVAVLCGNGGTFCAG---------------ADLKAFGTAEANAVHRTGPG 88
Query: 67 -------TFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASF 119
KP +A + G + G ++L RV VF + G G +
Sbjct: 89 PMGPSRMMLSKPVIAAVSGYAVAGGLELALWCDLRVAEQDAVFGVFCRRWGVPLIDGGTV 148
Query: 120 YLSHLPGYLGEY-LALTGEKLNGVEMIACGLATHYTLNGR 158
L L G+ + LTG + E +A GLA NG+
Sbjct: 149 RLPRLIGHSRAMDMILTGRAVQADEALAIGLANRVVPNGQ 188
>pdb|3MJF|A Chain A, Phosphoribosylamine-Glycine Ligase From Yersinia Pestis
Length = 431
Score = 28.1 bits (61), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 17/35 (48%)
Query: 3 GRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVI 37
G+L W+E P +G VL G A GDVI
Sbjct: 320 GKLNEKTSDWDERPSLGVVLAAGGYPADYRQGDVI 354
>pdb|3B96|A Chain A, Structural Basis For Substrate Fatty-Acyl Chain
Specificity: Crystal Structure Of Human Very-Long-Chain
Acyl-Coa Dehydrogenase
Length = 587
Score = 27.7 bits (60), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 44/107 (41%), Gaps = 21/107 (19%)
Query: 78 GITMGCGAGISLQGMYRVVTDKTV------FSNPETQMGF---HPDAG---ASFYLSHLP 125
GIT+G I +G+ T ++ ET F P +G AS S +P
Sbjct: 107 GITLGAHQSIGFKGILLFGTKAQKEKYLPKLASGETVAAFCLTEPSSGSDAASIRTSAVP 166
Query: 126 GYLGEYLALTGEKL---NGVEMIACGLATHYTLNGRLPLVEERVGKL 169
G+Y L G KL NG GLA +T+ + P+ + G +
Sbjct: 167 SPCGKYYTLNGSKLWISNG------GLADIFTVFAKTPVTDPATGAV 207
>pdb|2UXW|A Chain A, Crystal Structure Of Human Very Long Chain Acyl-coa
Dehydrogenase (acadvl)
Length = 607
Score = 27.7 bits (60), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 44/107 (41%), Gaps = 21/107 (19%)
Query: 78 GITMGCGAGISLQGMYRVVTDKTV------FSNPETQMGF---HPDAG---ASFYLSHLP 125
GIT+G I +G+ T ++ ET F P +G AS S +P
Sbjct: 127 GITLGAHQSIGFKGILLFGTKAQKEKYLPKLASGETVAAFCLTEPSSGSDAASIRTSAVP 186
Query: 126 GYLGEYLALTGEKL---NGVEMIACGLATHYTLNGRLPLVEERVGKL 169
G+Y L G KL NG GLA +T+ + P+ + G +
Sbjct: 187 SPCGKYYTLNGSKLWISNG------GLADIFTVFAKTPVTDPATGAV 227
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.139 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,522,802
Number of Sequences: 62578
Number of extensions: 446282
Number of successful extensions: 1186
Number of sequences better than 100.0: 86
Number of HSP's better than 100.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 1103
Number of HSP's gapped (non-prelim): 88
length of query: 338
length of database: 14,973,337
effective HSP length: 99
effective length of query: 239
effective length of database: 8,778,115
effective search space: 2097969485
effective search space used: 2097969485
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)