Query 019601
Match_columns 338
No_of_seqs 165 out of 1774
Neff 7.7
Searched_HMMs 46136
Date Fri Mar 29 03:03:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019601.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019601hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02851 3-hydroxyisobutyryl-C 100.0 1E-63 2.2E-68 484.1 35.2 338 1-338 70-407 (407)
2 PLN02988 3-hydroxyisobutyryl-C 100.0 4.8E-62 1E-66 471.0 33.7 338 1-338 37-378 (381)
3 PLN02157 3-hydroxyisobutyryl-C 100.0 1.8E-61 4E-66 468.5 33.7 336 1-336 65-400 (401)
4 KOG1684 Enoyl-CoA hydratase [L 100.0 2.8E-60 6.1E-65 437.9 27.1 333 1-337 66-401 (401)
5 PLN02874 3-hydroxyisobutyryl-C 100.0 7E-59 1.5E-63 450.2 33.0 328 1-331 39-366 (379)
6 PRK05617 3-hydroxyisobutyryl-C 100.0 2.8E-57 6.1E-62 434.0 29.7 310 1-319 31-342 (342)
7 PLN02600 enoyl-CoA hydratase 100.0 1.1E-46 2.4E-51 347.1 24.6 227 1-303 23-251 (251)
8 PRK09076 enoyl-CoA hydratase; 100.0 1.4E-46 3.1E-51 347.7 25.0 226 1-302 30-257 (258)
9 PRK05980 enoyl-CoA hydratase; 100.0 1.1E-46 2.3E-51 348.9 24.0 228 1-300 31-260 (260)
10 PRK05862 enoyl-CoA hydratase; 100.0 1.4E-46 2.9E-51 347.7 23.5 225 1-303 32-257 (257)
11 PRK07658 enoyl-CoA hydratase; 100.0 1.4E-46 3.1E-51 347.5 23.6 227 1-302 29-256 (257)
12 PRK06142 enoyl-CoA hydratase; 100.0 2E-46 4.4E-51 349.2 23.8 230 1-302 34-272 (272)
13 PRK08258 enoyl-CoA hydratase; 100.0 2.3E-46 5E-51 349.7 24.0 230 1-302 45-276 (277)
14 PRK08150 enoyl-CoA hydratase; 100.0 2.9E-46 6.4E-51 344.9 24.3 224 1-302 30-254 (255)
15 PLN02664 enoyl-CoA hydratase/d 100.0 2.5E-46 5.5E-51 349.0 24.1 230 1-302 36-274 (275)
16 KOG1680 Enoyl-CoA hydratase [L 100.0 3E-47 6.6E-52 342.0 16.8 224 1-302 65-289 (290)
17 PRK09674 enoyl-CoA hydratase-i 100.0 3E-46 6.4E-51 345.0 23.3 224 1-302 30-254 (255)
18 PRK07657 enoyl-CoA hydratase; 100.0 4.4E-46 9.4E-51 344.8 24.2 227 1-303 32-260 (260)
19 PRK09245 enoyl-CoA hydratase; 100.0 3.7E-46 8.1E-51 346.4 23.5 230 1-302 32-265 (266)
20 TIGR02280 PaaB1 phenylacetate 100.0 4.5E-46 9.7E-51 344.0 23.8 228 1-302 27-255 (256)
21 PRK06127 enoyl-CoA hydratase; 100.0 4.5E-46 9.7E-51 346.3 24.0 229 1-303 39-269 (269)
22 PRK08139 enoyl-CoA hydratase; 100.0 5.6E-46 1.2E-50 345.1 24.6 226 1-302 39-265 (266)
23 PRK07799 enoyl-CoA hydratase; 100.0 5.1E-46 1.1E-50 344.9 24.2 228 1-303 33-263 (263)
24 PRK08140 enoyl-CoA hydratase; 100.0 4.7E-46 1E-50 345.0 23.8 229 1-302 32-261 (262)
25 PRK08138 enoyl-CoA hydratase; 100.0 5.9E-46 1.3E-50 344.1 23.9 224 1-302 36-260 (261)
26 PRK05809 3-hydroxybutyryl-CoA 100.0 7.5E-46 1.6E-50 343.3 24.2 226 1-302 32-259 (260)
27 PRK07511 enoyl-CoA hydratase; 100.0 1.4E-45 3E-50 341.5 24.3 228 1-301 31-259 (260)
28 PRK06563 enoyl-CoA hydratase; 100.0 7.9E-46 1.7E-50 342.2 22.6 226 1-302 27-254 (255)
29 PRK05995 enoyl-CoA hydratase; 100.0 1.3E-45 2.9E-50 342.0 23.3 229 1-303 32-262 (262)
30 PRK08252 enoyl-CoA hydratase; 100.0 2.1E-45 4.6E-50 339.1 23.5 222 1-302 31-253 (254)
31 PRK07659 enoyl-CoA hydratase; 100.0 2.1E-45 4.6E-50 340.2 22.7 226 1-303 34-260 (260)
32 PRK05981 enoyl-CoA hydratase; 100.0 2.5E-45 5.3E-50 340.9 23.1 230 1-302 32-265 (266)
33 PRK07468 enoyl-CoA hydratase; 100.0 3.5E-45 7.5E-50 339.1 23.6 228 1-302 33-261 (262)
34 PRK06494 enoyl-CoA hydratase; 100.0 4.6E-45 1E-49 337.8 23.5 223 1-302 32-258 (259)
35 PRK06688 enoyl-CoA hydratase; 100.0 3.1E-45 6.6E-50 339.0 22.3 225 1-302 33-258 (259)
36 PRK03580 carnitinyl-CoA dehydr 100.0 6.2E-45 1.3E-49 337.3 23.4 225 1-302 30-260 (261)
37 PRK05674 gamma-carboxygeranoyl 100.0 4.2E-45 9.1E-50 339.0 22.3 228 1-302 34-263 (265)
38 PRK06495 enoyl-CoA hydratase; 100.0 6.7E-45 1.5E-49 336.3 23.2 225 1-302 31-256 (257)
39 PRK07327 enoyl-CoA hydratase; 100.0 6.5E-45 1.4E-49 338.4 23.1 224 1-302 40-267 (268)
40 TIGR03189 dienoyl_CoA_hyt cycl 100.0 8.7E-45 1.9E-49 334.3 22.9 220 1-302 28-250 (251)
41 PRK09120 p-hydroxycinnamoyl Co 100.0 1.2E-44 2.5E-49 337.7 23.8 223 1-294 36-262 (275)
42 PRK06210 enoyl-CoA hydratase; 100.0 6.5E-45 1.4E-49 339.1 22.1 230 1-302 34-271 (272)
43 PRK06143 enoyl-CoA hydratase; 100.0 1.1E-44 2.4E-49 334.7 23.1 218 1-294 35-254 (256)
44 PRK07260 enoyl-CoA hydratase; 100.0 8.9E-45 1.9E-49 335.2 22.2 223 1-294 30-253 (255)
45 TIGR01929 menB naphthoate synt 100.0 1E-44 2.2E-49 335.5 22.4 226 1-302 31-258 (259)
46 PRK05864 enoyl-CoA hydratase; 100.0 1.1E-44 2.4E-49 338.2 22.9 231 1-303 38-275 (276)
47 PRK08260 enoyl-CoA hydratase; 100.0 2.4E-44 5.3E-49 339.0 23.1 230 1-303 32-278 (296)
48 PRK06144 enoyl-CoA hydratase; 100.0 2.3E-44 5E-49 333.6 22.5 223 1-302 36-261 (262)
49 PRK07938 enoyl-CoA hydratase; 100.0 3.1E-44 6.8E-49 330.3 22.9 220 1-298 29-249 (249)
50 TIGR03210 badI 2-ketocyclohexa 100.0 2.6E-44 5.7E-49 332.2 22.5 223 1-302 30-255 (256)
51 PRK06072 enoyl-CoA hydratase; 100.0 8E-44 1.7E-48 327.5 23.8 221 1-303 28-248 (248)
52 PRK07509 enoyl-CoA hydratase; 100.0 7.1E-44 1.5E-48 330.4 23.3 226 1-301 31-261 (262)
53 PRK07396 dihydroxynaphthoic ac 100.0 7.1E-44 1.5E-48 332.2 23.1 227 1-303 41-269 (273)
54 PRK07827 enoyl-CoA hydratase; 100.0 1E-43 2.2E-48 329.0 23.3 226 1-301 34-259 (260)
55 PLN02888 enoyl-CoA hydratase 100.0 1.3E-43 2.8E-48 329.0 23.3 225 1-302 38-263 (265)
56 PRK11423 methylmalonyl-CoA dec 100.0 1.1E-43 2.3E-48 328.9 22.1 224 1-302 32-260 (261)
57 COG1024 CaiD Enoyl-CoA hydrata 100.0 1.9E-43 4.1E-48 326.7 22.9 223 1-300 33-257 (257)
58 PF00378 ECH: Enoyl-CoA hydrat 100.0 5.9E-44 1.3E-48 327.7 19.2 219 1-294 26-245 (245)
59 PRK07854 enoyl-CoA hydratase; 100.0 1.3E-43 2.9E-48 325.0 21.3 214 1-302 28-242 (243)
60 PRK06023 enoyl-CoA hydratase; 100.0 1.5E-43 3.4E-48 326.2 21.1 217 1-294 34-251 (251)
61 PRK08259 enoyl-CoA hydratase; 100.0 1.8E-43 3.8E-48 326.2 20.8 221 1-299 31-252 (254)
62 PRK05870 enoyl-CoA hydratase; 100.0 3.1E-43 6.8E-48 323.7 20.8 215 1-291 31-247 (249)
63 PLN03214 probable enoyl-CoA hy 100.0 2.7E-43 5.9E-48 328.8 19.9 221 1-294 39-263 (278)
64 PLN02921 naphthoate synthase 100.0 7.5E-43 1.6E-47 331.8 23.0 226 1-302 95-322 (327)
65 PRK08321 naphthoate synthase; 100.0 1.9E-42 4.2E-47 326.7 22.4 230 1-303 53-298 (302)
66 PRK12478 enoyl-CoA hydratase; 100.0 6.5E-43 1.4E-47 329.2 18.3 230 1-306 33-284 (298)
67 PRK07112 polyketide biosynthes 100.0 3.7E-42 7.9E-47 317.7 22.2 222 1-302 32-254 (255)
68 PRK07110 polyketide biosynthes 100.0 9E-42 1.9E-46 314.0 21.7 214 1-291 33-247 (249)
69 TIGR03222 benzo_boxC benzoyl-C 100.0 4.1E-41 9E-46 337.1 22.4 228 1-304 299-545 (546)
70 PRK08184 benzoyl-CoA-dihydrodi 100.0 3.7E-41 8.1E-46 338.4 21.7 229 1-305 303-550 (550)
71 PRK06190 enoyl-CoA hydratase; 100.0 7.8E-41 1.7E-45 309.1 22.1 203 1-276 32-235 (258)
72 PRK05869 enoyl-CoA hydratase; 100.0 7E-40 1.5E-44 296.4 19.6 186 1-257 35-221 (222)
73 KOG1679 Enoyl-CoA hydratase [L 100.0 1.5E-40 3.2E-45 287.5 13.2 230 1-303 59-291 (291)
74 PRK08788 enoyl-CoA hydratase; 100.0 1.2E-38 2.5E-43 298.0 22.8 221 1-291 44-274 (287)
75 KOG1681 Enoyl-CoA isomerase [L 100.0 1E-39 2.3E-44 284.6 11.3 231 1-301 50-290 (292)
76 PRK11730 fadB multifunctional 100.0 1.5E-38 3.2E-43 330.7 21.9 259 1-294 35-296 (715)
77 TIGR03200 dearomat_oah 6-oxocy 100.0 1E-37 2.2E-42 295.1 23.8 268 1-294 56-328 (360)
78 PRK08290 enoyl-CoA hydratase; 100.0 2.4E-38 5.1E-43 297.0 18.9 206 1-275 32-257 (288)
79 PRK06213 enoyl-CoA hydratase; 100.0 2.7E-38 5.9E-43 287.5 17.5 197 1-271 30-228 (229)
80 PRK11154 fadJ multifunctional 100.0 3.6E-37 7.8E-42 320.2 22.3 254 1-294 35-294 (708)
81 PRK08272 enoyl-CoA hydratase; 100.0 3.4E-37 7.3E-42 291.2 19.0 188 1-258 38-247 (302)
82 TIGR02440 FadJ fatty oxidation 100.0 8.8E-37 1.9E-41 316.7 22.2 254 1-294 30-289 (699)
83 KOG1682 Enoyl-CoA isomerase [L 100.0 8.8E-36 1.9E-40 256.1 17.8 227 1-303 60-287 (287)
84 TIGR02437 FadB fatty oxidation 100.0 1.9E-35 4.2E-40 306.9 23.8 260 1-294 35-297 (714)
85 PLN02267 enoyl-CoA hydratase/i 100.0 3.8E-35 8.1E-40 268.4 18.1 158 1-160 27-189 (239)
86 KOG0016 Enoyl-CoA hydratase/is 100.0 7.7E-35 1.7E-39 259.6 16.9 224 1-294 36-263 (266)
87 TIGR02441 fa_ox_alpha_mit fatt 100.0 4.9E-34 1.1E-38 297.1 22.2 261 1-294 42-321 (737)
88 COG0447 MenB Dihydroxynaphthoi 100.0 3.7E-35 8E-40 254.4 8.9 226 2-302 48-277 (282)
89 cd06558 crotonase-like Crotona 100.0 1E-32 2.3E-37 244.0 15.7 162 1-164 27-189 (195)
90 TIGR03222 benzo_boxC benzoyl-C 100.0 1.3E-31 2.8E-36 268.7 17.0 162 1-163 49-219 (546)
91 PRK08184 benzoyl-CoA-dihydrodi 100.0 6.2E-31 1.3E-35 264.6 17.0 161 1-162 53-222 (550)
92 PF13766 ECH_C: 2-enoyl-CoA Hy 99.9 1E-21 2.3E-26 160.1 10.3 116 196-318 3-118 (118)
93 cd07014 S49_SppA Signal peptid 99.8 8.2E-20 1.8E-24 159.7 10.2 139 2-160 24-173 (177)
94 cd07020 Clp_protease_NfeD_1 No 99.7 1.3E-17 2.9E-22 147.1 11.8 133 3-159 16-169 (187)
95 cd07019 S49_SppA_1 Signal pept 99.6 3.4E-15 7.3E-20 134.2 8.7 138 2-159 23-206 (211)
96 cd00394 Clp_protease_like Case 99.5 1.7E-13 3.6E-18 117.8 11.7 130 1-153 12-161 (161)
97 cd07016 S14_ClpP_1 Caseinolyti 99.5 4E-13 8.7E-18 115.5 11.3 126 2-153 17-160 (160)
98 cd07022 S49_Sppa_36K_type Sign 99.4 1.4E-12 3.1E-17 117.4 11.3 136 1-159 26-209 (214)
99 cd07023 S49_Sppa_N_C Signal pe 99.4 2.7E-12 5.8E-17 115.1 12.1 138 1-158 18-202 (208)
100 TIGR00706 SppA_dom signal pept 99.3 2.5E-11 5.3E-16 108.8 12.0 136 2-160 15-199 (207)
101 TIGR00705 SppA_67K signal pept 99.3 1.8E-11 3.9E-16 125.3 11.8 133 3-155 332-510 (584)
102 cd07018 S49_SppA_67K_type Sign 99.2 1.2E-10 2.7E-15 105.4 10.6 138 1-159 30-216 (222)
103 cd07021 Clp_protease_NfeD_like 99.1 3.6E-10 7.8E-15 98.8 11.3 126 3-156 16-171 (178)
104 cd07013 S14_ClpP Caseinolytic 98.6 3.8E-07 8.2E-12 78.6 11.8 129 2-153 14-162 (162)
105 cd07015 Clp_protease_NfeD Nodu 98.6 5.7E-07 1.2E-11 78.1 11.2 130 3-156 16-165 (172)
106 PRK00277 clpP ATP-dependent Cl 98.5 6.6E-07 1.4E-11 79.8 10.0 96 61-156 81-196 (200)
107 PRK12553 ATP-dependent Clp pro 98.5 1.3E-06 2.8E-11 78.3 10.5 129 3-156 50-202 (207)
108 KOG1683 Hydroxyacyl-CoA dehydr 98.4 4E-07 8.7E-12 86.3 5.0 151 2-156 84-240 (380)
109 PRK10949 protease 4; Provision 98.4 4.4E-06 9.6E-11 86.1 12.6 138 3-160 350-533 (618)
110 cd07017 S14_ClpP_2 Caseinolyti 98.3 3.9E-06 8.6E-11 72.9 10.3 128 3-153 24-171 (171)
111 PRK14512 ATP-dependent Clp pro 98.2 1.5E-05 3.3E-10 70.8 10.8 97 60-156 72-188 (197)
112 CHL00198 accA acetyl-CoA carbo 98.2 0.00012 2.6E-09 69.3 16.5 92 56-156 179-270 (322)
113 PF00574 CLP_protease: Clp pro 98.1 5.5E-06 1.2E-10 72.6 7.0 97 60-156 65-181 (182)
114 PRK12319 acetyl-CoA carboxylas 98.1 2.8E-05 6.1E-10 71.7 11.9 91 56-157 123-215 (256)
115 TIGR00493 clpP ATP-dependent C 98.1 3.2E-05 7E-10 68.4 11.4 95 61-155 76-190 (191)
116 CHL00028 clpP ATP-dependent Cl 98.1 2.8E-05 6.1E-10 69.2 10.8 98 60-157 79-197 (200)
117 PRK05724 acetyl-CoA carboxylas 98.0 0.00024 5.3E-09 67.2 16.1 93 55-156 175-267 (319)
118 COG0616 SppA Periplasmic serin 98.0 5.3E-05 1.2E-09 72.3 11.6 133 3-159 83-265 (317)
119 PLN03230 acetyl-coenzyme A car 98.0 0.00011 2.3E-09 71.5 13.6 92 55-156 245-337 (431)
120 PLN03229 acetyl-coenzyme A car 98.0 9.1E-05 2E-09 76.2 12.7 92 56-156 267-358 (762)
121 TIGR00513 accA acetyl-CoA carb 97.9 0.00016 3.5E-09 68.4 12.9 91 56-157 176-268 (316)
122 PRK14514 ATP-dependent Clp pro 97.9 0.00018 3.8E-09 65.0 11.5 96 61-156 104-219 (221)
123 PRK12551 ATP-dependent Clp pro 97.9 0.00024 5.2E-09 63.1 12.1 99 60-158 74-192 (196)
124 PRK14513 ATP-dependent Clp pro 97.8 0.00021 4.5E-09 63.7 11.3 97 60-158 76-194 (201)
125 TIGR03133 malonate_beta malona 97.8 0.00028 6.1E-09 65.6 12.0 78 70-158 137-219 (274)
126 PRK11778 putative inner membra 97.7 0.00026 5.5E-09 67.6 10.0 97 62-159 147-289 (330)
127 PRK07189 malonate decarboxylas 97.6 0.00053 1.2E-08 64.5 10.2 78 70-158 146-228 (301)
128 PF01972 SDH_sah: Serine dehyd 97.5 0.0019 4E-08 59.6 12.2 58 60-117 109-166 (285)
129 TIGR00705 SppA_67K signal pept 97.4 0.0011 2.4E-08 68.4 11.3 84 2-105 78-161 (584)
130 COG0740 ClpP Protease subunit 97.2 0.0053 1.1E-07 54.3 11.0 99 60-159 76-195 (200)
131 TIGR00515 accD acetyl-CoA carb 97.1 0.0077 1.7E-07 56.5 12.4 130 3-163 142-272 (285)
132 PF01343 Peptidase_S49: Peptid 97.1 0.00056 1.2E-08 58.3 4.1 96 65-160 2-144 (154)
133 PRK05654 acetyl-CoA carboxylas 97.0 0.0073 1.6E-07 56.9 11.3 129 3-162 143-272 (292)
134 PF01039 Carboxyl_trans: Carbo 97.0 0.01 2.2E-07 60.1 12.5 119 3-158 79-207 (493)
135 TIGR03134 malonate_gamma malon 96.9 0.0044 9.5E-08 56.7 8.6 97 55-159 90-192 (238)
136 PRK12552 ATP-dependent Clp pro 96.9 0.016 3.5E-07 52.3 12.0 95 61-157 99-215 (222)
137 CHL00174 accD acetyl-CoA carbo 96.7 0.017 3.7E-07 54.3 10.6 81 67-163 205-286 (296)
138 TIGR01117 mmdA methylmalonyl-C 96.2 0.068 1.5E-06 54.4 12.8 136 4-161 338-486 (512)
139 COG0825 AccA Acetyl-CoA carbox 96.1 0.0079 1.7E-07 55.7 4.6 90 57-156 176-266 (317)
140 COG1030 NfeD Membrane-bound se 96.0 0.07 1.5E-06 52.5 11.2 102 55-156 71-188 (436)
141 PRK10949 protease 4; Provision 95.7 0.057 1.2E-06 56.1 9.5 85 2-106 97-181 (618)
142 COG4799 Acetyl-CoA carboxylase 95.6 0.022 4.7E-07 57.4 6.0 135 65-221 160-313 (526)
143 PLN02820 3-methylcrotonyl-CoA 95.4 0.085 1.8E-06 54.2 9.6 73 65-158 201-281 (569)
144 TIGR01117 mmdA methylmalonyl-C 95.0 0.15 3.2E-06 52.0 9.6 76 67-158 152-230 (512)
145 COG0777 AccD Acetyl-CoA carbox 94.6 0.43 9.3E-06 44.2 10.6 128 3-161 144-272 (294)
146 PLN02157 3-hydroxyisobutyryl-C 92.7 0.21 4.5E-06 49.3 5.5 64 232-301 228-294 (401)
147 PLN02820 3-methylcrotonyl-CoA 92.2 0.63 1.4E-05 48.0 8.6 102 52-160 422-544 (569)
148 PF01039 Carboxyl_trans: Carbo 88.4 0.68 1.5E-05 47.0 4.9 103 52-161 350-469 (493)
149 KOG0840 ATP-dependent Clp prot 83.9 5 0.00011 36.9 7.6 89 63-156 144-257 (275)
150 COG0074 SucD Succinyl-CoA synt 76.1 9.2 0.0002 35.8 6.7 54 4-81 187-240 (293)
151 PF02601 Exonuc_VII_L: Exonucl 71.3 7.6 0.00016 36.9 5.2 76 3-100 58-136 (319)
152 TIGR00237 xseA exodeoxyribonuc 70.6 7.3 0.00016 38.9 5.1 75 3-99 173-247 (432)
153 PTZ00187 succinyl-CoA syntheta 67.9 15 0.00032 35.1 6.3 54 4-81 211-264 (317)
154 PF13607 Succ_CoA_lig: Succiny 64.5 18 0.00038 30.2 5.5 50 5-80 42-92 (138)
155 smart00250 PLEC Plectin repeat 58.0 7.9 0.00017 24.5 1.8 18 135-152 18-35 (38)
156 PLN02522 ATP citrate (pro-S)-l 57.3 27 0.00059 36.4 6.4 52 5-81 210-262 (608)
157 KOG0540 3-Methylcrotonyl-CoA c 56.2 37 0.0008 33.9 6.7 120 15-160 382-511 (536)
158 COG1570 XseA Exonuclease VII, 55.3 24 0.00052 35.2 5.4 54 3-76 179-232 (440)
159 PRK00286 xseA exodeoxyribonucl 54.8 18 0.00039 36.0 4.6 74 3-99 179-252 (438)
160 PLN00125 Succinyl-CoA ligase [ 50.2 39 0.00085 32.1 5.8 53 5-81 193-245 (300)
161 PF00681 Plectin: Plectin repe 47.5 7.3 0.00016 25.7 0.3 19 134-152 17-35 (45)
162 PF00549 Ligase_CoA: CoA-ligas 44.7 35 0.00076 29.0 4.2 62 4-82 60-121 (153)
163 COG4799 Acetyl-CoA carboxylase 42.8 33 0.00071 35.1 4.3 55 49-103 377-435 (526)
164 KOG0595 Serine/threonine-prote 35.9 61 0.0013 32.0 4.8 38 30-67 90-127 (429)
165 TIGR02717 AcCoA-syn-alpha acet 33.8 98 0.0021 31.0 6.1 52 5-81 191-242 (447)
166 PRK06091 membrane protein FdrA 30.9 1.4E+02 0.003 30.9 6.6 22 61-82 271-292 (555)
167 PRK05678 succinyl-CoA syntheta 28.7 1.6E+02 0.0034 27.8 6.2 23 5-27 188-210 (291)
168 PF06833 MdcE: Malonate decarb 28.3 1E+02 0.0022 28.2 4.6 97 54-158 90-189 (234)
169 TIGR01019 sucCoAalpha succinyl 28.0 1.7E+02 0.0037 27.5 6.3 24 4-27 185-208 (286)
170 PRK14053 methyltransferase; Pr 27.7 94 0.002 27.3 4.1 37 5-41 52-89 (194)
171 PRK00964 tetrahydromethanopter 24.4 1.1E+02 0.0024 27.7 4.1 37 5-41 59-96 (225)
172 PF04208 MtrA: Tetrahydrometha 24.3 1E+02 0.0023 26.7 3.7 37 5-41 55-92 (176)
173 PF13877 RPAP3_C: Potential Mo 24.1 1.7E+02 0.0036 22.2 4.6 49 200-248 38-86 (94)
174 TIGR01111 mtrA N5-methyltetrah 24.1 1.2E+02 0.0025 27.6 4.1 37 5-41 59-96 (238)
175 PF14842 FliG_N: FliG N-termin 22.8 1.5E+02 0.0032 23.4 4.2 67 154-220 30-100 (108)
176 PRK13505 formate--tetrahydrofo 22.5 1.6E+02 0.0034 30.5 5.2 76 15-94 322-397 (557)
177 COG0412 Dienelactone hydrolase 21.0 1.8E+02 0.0039 26.3 4.9 40 55-94 93-134 (236)
178 KOG1255 Succinyl-CoA synthetas 20.0 2.3E+02 0.0051 26.1 5.2 56 4-80 218-273 (329)
No 1
>PLN02851 3-hydroxyisobutyryl-CoA hydrolase-like protein
Probab=100.00 E-value=1e-63 Score=484.07 Aligned_cols=338 Identities=81% Similarity=1.350 Sum_probs=301.7
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGIT 80 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a 80 (338)
|+.+|.++++.++.|+++++|||+|.|++||+|+|++.+......+..+....+++.++.+.+.|.+++||+||+|||+|
T Consensus 70 m~~eL~~al~~~~~D~~vrvVVL~G~GkaFcAGgDl~~l~~~~~~~~~~~~~~~f~~~~~l~~~i~~~pKPvIA~v~G~a 149 (407)
T PLN02851 70 MVARLKRLYESWEENPDIGFVLMKGSGRAFCSGADVVSLYHLINEGNVEECKLFFENLYKFVYLQGTYLKPNVAIMDGIT 149 (407)
T ss_pred HHHHHHHHHHHHHhCCCceEEEEECCCCCccCCcCHHHHHhhccccchHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCEE
Confidence 68899999999999999999999999999999999999865332222344566778888899999999999999999999
Q ss_pred ccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchHHHHHhhhCCCCCHHHHHHcCccceeccCCChh
Q 019601 81 MGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYLGEYLALTGEKLNGVEMIACGLATHYTLNGRLP 160 (338)
Q Consensus 81 ~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l~ 160 (338)
+|||++|+++||+||++++++|++||+++|++|++|++++|+|++|..+.++++||++++|+||+++||++++||++++.
T Consensus 150 mGGG~gLal~~D~rVate~a~famPE~~iGl~PdvG~s~~L~rl~g~~g~~L~LTG~~i~a~eA~~~GLa~~~v~~~~l~ 229 (407)
T PLN02851 150 MGCGAGISIPGMFRVVTDKTVFAHPEVQMGFHPDAGASYYLSRLPGYLGEYLALTGQKLNGVEMIACGLATHYCLNARLP 229 (407)
T ss_pred eeHHHHHHHhCCEEEEeCCceEecchhccCCCCCccHHHHHHHhcCHHHHHHHHhCCcCCHHHHHHCCCceeecCHhhHH
Confidence 99999999999999999999999999999999999999999999998899999999999999999999999999999998
Q ss_pred HHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHHHhc
Q 019601 161 LVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKEA 240 (338)
Q Consensus 161 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~ 240 (338)
.+.+.+.++...++..+.+.+++|.....++...+..+...|++||+.+++++|+++|+....+.+++||++.++.|.+.
T Consensus 230 ~l~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~I~~~F~~~sv~~I~~~L~~~~~~~~~~wa~~~~~~l~~~ 309 (407)
T PLN02851 230 LIEERLGKLLTDDPAVIEDSLAQYGDLVYPDKSSVLHKIETIDKCFGHDTVEEIIEALENEAASSYDEWCKKALKKIKEA 309 (407)
T ss_pred HHHHHHHhhccCCHHHHHHHHHHhccccCCCcccHHHHHHHHHHHhCCCCHHHHHHHHHhcccccchHHHHHHHHHHHhc
Confidence 77777777777778888999999976533344556677899999999999999999999754333578999999999999
Q ss_pred CchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCCCCCCCCCCCHHHHhcccCCC
Q 019601 241 SPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDPPSLADVSKDMVDCYFSPF 320 (338)
Q Consensus 241 sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~~~~~~~~~~~~~~~~~~~~~ 320 (338)
||.|+++|.+.++++...++.++++.|+++..+++....++||.|||++.|+||+++|+|+|++++||+++.|+.+|.|+
T Consensus 310 SP~Sl~vt~~~~~~~~~~sl~e~l~~E~~l~~~~~~~~~~~DF~EGVRA~LIDKd~~P~W~p~sl~~V~~~~v~~~f~~~ 389 (407)
T PLN02851 310 SPLSLKVTLQSIREGRFQTLDQCLAREYRISLCGVSKWVSGDFCEGVRARLVDKDFAPKWDPPSLGEVSKDMVDCYFTPL 389 (407)
T ss_pred CcHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCccchHHHHHHHHhcCCCCCCCCCCCChhhCCHHHHHHHhCCC
Confidence 99999999999999998999999999999998876212379999999999999999999999999999999999999998
Q ss_pred CCCCCCCCCCccccCCCC
Q 019601 321 DELEPELQLPTALREPYI 338 (338)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~ 338 (338)
.....+|++|+..++||.
T Consensus 390 ~~~~~~l~~~~~~~~~~~ 407 (407)
T PLN02851 390 DESESELELPTAQREPYM 407 (407)
T ss_pred CCCcccccCCcccccccC
Confidence 654447999999999884
No 2
>PLN02988 3-hydroxyisobutyryl-CoA hydrolase
Probab=100.00 E-value=4.8e-62 Score=470.98 Aligned_cols=338 Identities=46% Similarity=0.843 Sum_probs=292.9
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGIT 80 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a 80 (338)
|+.+|.++|+.++.|++|++|||+|.|++||+|+|++++......+.......+++..+.+...|..+||||||+|||+|
T Consensus 37 m~~~L~~al~~~~~d~~v~~VVl~G~G~~FcAGgDl~~l~~~~~~~~~~~~~~~f~~~~~l~~~i~~~pKPvIa~v~G~a 116 (381)
T PLN02988 37 MISRLLQLFLAFEEDPSVKLVILKGHGRAFCAGGDVAAVVRDIEQGNWRLGANFFSDEYMLNYVMATYSKAQVSILNGIV 116 (381)
T ss_pred HHHHHHHHHHHHHhCCCeeEEEEECCCCCcccCcCHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHCCCCEEEEecCeE
Confidence 68899999999999999999999999999999999999854221221122234455555667788999999999999999
Q ss_pred ccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchHHHHHhhhCCCCCHHHHHHcCccceeccCCChh
Q 019601 81 MGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYLGEYLALTGEKLNGVEMIACGLATHYTLNGRLP 160 (338)
Q Consensus 81 ~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l~ 160 (338)
+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+++++|||++++|+||+++||++++||++++.
T Consensus 117 ~GGG~~Lal~~D~rvate~a~f~mPE~~iGl~Pd~G~s~~L~rl~G~~~~~l~LTG~~i~a~eA~~~GLv~~vv~~~~l~ 196 (381)
T PLN02988 117 MGGGAGVSVHGRFRIATENTVFAMPETALGLFPDVGASYFLSRLPGFFGEYVGLTGARLDGAEMLACGLATHFVPSTRLT 196 (381)
T ss_pred eehhhHHhhcCCeEEEcCCcEEeChhhhcCcCCCccHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHcCCceEecCHhHHH
Confidence 99999999999999999999999999999999999999999999997799999999999999999999999999999999
Q ss_pred HHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHHHhc
Q 019601 161 LVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKEA 240 (338)
Q Consensus 161 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~ 240 (338)
....++.++...++..+...++.|.......+.....+...|++||+.+++++|+++|+...++.+++|+++.++.|.+.
T Consensus 197 ~~~~~la~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~f~~~~~~~i~~~L~~~~~~~~~~wa~~~~~~l~~~ 276 (381)
T PLN02988 197 ALEADLCRIGSNDPTFASTILDAYTQHPRLKPQSAYHRLDVIDRCFSRRTVEEIISALEREATQEADGWISATIQALKKA 276 (381)
T ss_pred HHHHHHHHhhccCHHHHHHHHHHhhcCCCCCCchHHHHHHHHHHHhCCCCHHHHHHHHHhhccccccHHHHHHHHHHHhc
Confidence 88888877767777778888888875432223345566899999999999999999999754333679999999999999
Q ss_pred CchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCCCCCCCCCCCHHHHhcccCCC
Q 019601 241 SPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDPPSLADVSKDMVDCYFSPF 320 (338)
Q Consensus 241 sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~~~~~~~~~~~~~~~~~~~~~ 320 (338)
||.|+++|.+.++++...++.++++.|+++..+++....++||.|||++.|++|+++|+|+|+++++|+++.|+.+|.|+
T Consensus 277 sP~sl~vt~~~~~~~~~~sl~e~~~~e~~~~~~~~~~~~~~DF~EGVRA~LiDKd~~P~W~p~~l~~v~~~~v~~~f~~~ 356 (381)
T PLN02988 277 SPASLKISLRSIREGRLQGVGQCLIREYRMVCHVMKGEISKDFVEGCRAILVDKDKNPKWEPRRLEDMKDSMVEQYFERV 356 (381)
T ss_pred CcHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCCCchHHHhHHHHhcCCCCCCCCCCCChhhCCHHHHHHHhCCC
Confidence 99999999999999998999999999999999887411258999999999999999999999999999999999999998
Q ss_pred CCCC--CCCCCCc--cccCCCC
Q 019601 321 DELE--PELQLPT--ALREPYI 338 (338)
Q Consensus 321 ~~~~--~~~~~~~--~~~~~~~ 338 (338)
..-+ .+|++|+ ..|+||+
T Consensus 357 ~~~~~~~~l~~~~~~~~~~~~~ 378 (381)
T PLN02988 357 EEEEEWDDLKLPPRNNLPALAI 378 (381)
T ss_pred CccccccccCCcccccccchhh
Confidence 5422 1699999 8888874
No 3
>PLN02157 3-hydroxyisobutyryl-CoA hydrolase-like protein
Probab=100.00 E-value=1.8e-61 Score=468.46 Aligned_cols=336 Identities=59% Similarity=1.099 Sum_probs=291.1
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGIT 80 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a 80 (338)
|+.+|.++++.++.|+++++|||+|.|++||+|+|++++..............++...+.+...|..++|||||+|||+|
T Consensus 65 m~~~L~~al~~~~~D~~vrvVVl~G~GkaFcAGgDl~~l~~~~~~~~~~~~~~~~~~~~~l~~~i~~~pkPvIA~v~G~a 144 (401)
T PLN02157 65 MGYRLQKLYKNWEEDPNIGFVMMKGSGRAFCAGGDIVSLYHLRKRGSPDAIREFFSSLYSFIYLLGTYLKPHVAILNGVT 144 (401)
T ss_pred HHHHHHHHHHHHhhCCCCeEEEEECCCCCccCCcCHHHHHhhccccchHHHHHHHHHHHHHHHHHHhCCCCEEEEEeCeE
Confidence 68899999999999999999999999999999999999864321121222345566666778889999999999999999
Q ss_pred ccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchHHHHHhhhCCCCCHHHHHHcCccceeccCCChh
Q 019601 81 MGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYLGEYLALTGEKLNGVEMIACGLATHYTLNGRLP 160 (338)
Q Consensus 81 ~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l~ 160 (338)
+|||++|+++||+||++++++|++||+++|++|++|++++|+|++|..+++|++||+.++|+||+++||++++||++++.
T Consensus 145 ~GGG~~Lal~cD~rvate~a~fa~PE~~iGl~Pd~G~s~~L~rl~G~~a~~L~LTG~~i~A~eA~~~GLv~~vVp~~~l~ 224 (401)
T PLN02157 145 MGGGTGVSIPGTFRVATDRTIFATPETIIGFHPDAGASFNLSHLPGRLGEYLGLTGLKLSGAEMLACGLATHYIRSEEIP 224 (401)
T ss_pred eehhHHHHHhCCEEEEeCCCEEEChhhhcCCCCCccHHHHHHHhhhHHHHHHHHcCCcCCHHHHHHcCCceEEeCHhHHH
Confidence 99999999999999999999999999999999999999999999996699999999999999999999999999999997
Q ss_pred HHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHHHhc
Q 019601 161 LVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKEA 240 (338)
Q Consensus 161 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~ 240 (338)
.....+.++...++..+...++.+..........+....+.|+.||+++++++|+++|+...+...+.|+++.++.|.+.
T Consensus 225 ~~~~~~~~i~~~~p~av~~~k~~~~~~~~~~~~~l~~~~~~i~~~f~~~d~~ei~~al~~~~~kr~~~wa~~~~~~l~~~ 304 (401)
T PLN02157 225 VMEEQLKKLLTDDPSVVESCLEKCAEVAHPEKTGVIRRIDLLEKCFSHDTVEEIIDSLEIEAGRRKDTWCITTLRRLKES 304 (401)
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHhcccCCcchhHHHHHHHHHHHhcCCCHHHHHHHHHhhhcccchHHHHHHHHHHHhc
Confidence 66666666667777777777777654432333455566899999999999999999998654444679999999999999
Q ss_pred CchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCCCCCCCCCCCHHHHhcccCCC
Q 019601 241 SPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDPPSLADVSKDMVDCYFSPF 320 (338)
Q Consensus 241 sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~~~~~~~~~~~~~~~~~~~~~ 320 (338)
||.|+++|.+.++++...++.++++.|+++..+++.+..++||.|||++.|++|+++|+|+|+++++|+++.|+.+|.|+
T Consensus 305 sP~Sl~vt~~~~~~~~~~~l~e~~~~e~~~~~~~~~~~~~~DF~EGVRA~LiDKd~~P~W~p~~l~~V~~~~v~~~f~~~ 384 (401)
T PLN02157 305 SPLSLKVALRSIREGRLQTLDQCLIREYRMSLQGLIGPMSGNFCEGVRARLIDKDEAPKWDPPSLEKVSEDMVDDYFCAL 384 (401)
T ss_pred CcHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHcCCCCCCCCCCCChhhCCHHHHHHHhCCC
Confidence 99999999999999998899999999999998876311258999999999999999999999999999999999999998
Q ss_pred CCCCCCCCCCccccCC
Q 019601 321 DELEPELQLPTALREP 336 (338)
Q Consensus 321 ~~~~~~~~~~~~~~~~ 336 (338)
.|-..+|++|+.|||.
T Consensus 385 ~~~~~~l~~~~~~~~~ 400 (401)
T PLN02157 385 TPTEPDLDLPVKLRES 400 (401)
T ss_pred CCCccccccchhhhhc
Confidence 5323479999999985
No 4
>KOG1684 consensus Enoyl-CoA hydratase [Lipid transport and metabolism]
Probab=100.00 E-value=2.8e-60 Score=437.91 Aligned_cols=333 Identities=48% Similarity=0.871 Sum_probs=310.5
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCC-CCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAG-RAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGI 79 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~ 79 (338)
|+..+.-.|..++.++.+++||+.|.| ++||+|+|+........+++......+|+..+.+...|.++.||.||.++|.
T Consensus 66 Mv~~~~~~L~~we~s~~~k~vIlkgs~~raFCAGgDI~~~ae~~~d~~~~~~~~fF~~eYsl~~~igtY~KP~ValmdGI 145 (401)
T KOG1684|consen 66 MVLSIYPKLVEWEKSPLVKLVILKGSGGRAFCAGGDIKAVAESIKDKETPEVKKFFTEEYSLNHLIGTYLKPYVALMDGI 145 (401)
T ss_pred HHHHHHHHHHhhccCCCceEEEEecCCCceeecCccHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHhcCceEEEeece
Confidence 667788899999999999999999995 9999999999887777677788899999999999999999999999999999
Q ss_pred cccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchHHHHHhhhCCCCCHHHHHHcCccceeccCCCh
Q 019601 80 TMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYLGEYLALTGEKLNGVEMIACGLATHYTLNGRL 159 (338)
Q Consensus 80 a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l 159 (338)
.+|||++|+...-||||||++.|.+||..||++|++|++++++|+.|.-+.|+.|||.++++.||+..||++++|+.++|
T Consensus 146 TMGgG~GLS~hg~fRVATerT~~AmPEt~IGlfPDVG~Sy~lsrlpg~lg~YLgLTG~rl~GaD~~~~GlATHyv~S~~l 225 (401)
T KOG1684|consen 146 TMGGGVGLSVHGRFRVATERTVFAMPETGIGLFPDVGASYFLSRLPGYLGLYLGLTGQRLSGADALRCGLATHYVPSEKL 225 (401)
T ss_pred eecCCcceeecceeEEeeccceecccccccccccCccceeehhhCccHHHHhhhhccceecchHHHHhcchhhccchhhh
Confidence 99999999999999999999999999999999999999999999999669999999999999999999999999999999
Q ss_pred hHHHHHHhhcccCCh-HHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhh-hcccccHHHHHHHHHH
Q 019601 160 PLVEERVGKLITDDP-SIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENE-AASSYDVWCRKAVEKL 237 (338)
Q Consensus 160 ~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~-~~~~~~~~a~~~a~~i 237 (338)
..+++++......+| +.+.+.+.+|+.....+.-.+-.+.+.|++||+.+++|||++.|.+. ++..+.+||++.++.|
T Consensus 226 ~~Lee~L~~~l~~dp~~~I~~~l~~y~~~~~~~~~~~~~~~~~i~~~Fs~~tVeeIie~lk~~q~~~~~~ewak~tlk~L 305 (401)
T KOG1684|consen 226 PSLEERLLKNLNDDPQSVINETLEKYASPAKDESFSLSLKLDVINKCFSANTVEEIIEALKNYQQSADGSEWAKETLKTL 305 (401)
T ss_pred hHHHHHHhhhcCCCcHHHHHHHHHHhcccCCCccccchhhHHHHHHhhccccHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Confidence 999999974445555 77899999999998777777778999999999999999999999664 4567889999999999
Q ss_pred HhcCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCCCCCCCCCCCHHHHhccc
Q 019601 238 KEASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDPPSLADVSKDMVDCYF 317 (338)
Q Consensus 238 ~~~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~~~~~~~~~~~~~~~~~~ 317 (338)
...||.|+++|.+.++.+...++.+++..|+++..+.+. +.||.||+++.|++|+++|+|+|.+++||++++|+.+|
T Consensus 306 ~k~SPtSLkvT~r~i~egs~~tl~~~l~~Eyr~s~~~~~---~~DF~EGvRA~LIDKd~~PKW~p~~l~~V~e~~Vdn~F 382 (401)
T KOG1684|consen 306 KKMSPTSLKVTLRQIREGSKQTLDQCLTMEYRLSLRMLM---RGDFCEGVRAVLIDKDQNPKWDPASLADVTEDEVDNYF 382 (401)
T ss_pred hhcCCchHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhh---ccchhhhhhheeecCCcCCCCCCcchhhcCHHHHHHhc
Confidence 999999999999999999999999999999999988765 89999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCccccCCC
Q 019601 318 SPFDELEPELQLPTALREPY 337 (338)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~ 337 (338)
.|.+. ..+|.+|+..|++|
T Consensus 383 ~~~p~-~~eLklp~~~r~~~ 401 (401)
T KOG1684|consen 383 KPLPS-KSELKLPVWNRKTY 401 (401)
T ss_pred cCCCC-cccccCchhcccCC
Confidence 99544 88999999999998
No 5
>PLN02874 3-hydroxyisobutyryl-CoA hydrolase-like protein
Probab=100.00 E-value=7e-59 Score=450.25 Aligned_cols=328 Identities=45% Similarity=0.796 Sum_probs=285.4
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGIT 80 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a 80 (338)
|+.+|.++++.++.|++|++|||+|.|++||+|+|++++...... ......++..++.+...|..++|||||+|||+|
T Consensus 39 m~~eL~~al~~~~~d~~vrvvVl~g~g~~FcaG~Dl~~~~~~~~~--~~~~~~~~~~~~~l~~~i~~~~kPvIAaV~G~a 116 (379)
T PLN02874 39 VVSLLAEFLEQWEKDDSVELIIIKGAGRAFSAGGDLKMFYDGRES--DDSCLEVVYRMYWLCYHIHTYKKTQVALVHGLV 116 (379)
T ss_pred HHHHHHHHHHHHhhCCCeEEEEEECCCCCccCccCHHHHHhhccc--chHHHHHHHHHHHHHHHHHhCCCCEEEEecCeE
Confidence 678999999999999999999999999999999999987532111 112233344455667889999999999999999
Q ss_pred ccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchHHHHHhhhCCCCCHHHHHHcCccceeccCCChh
Q 019601 81 MGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYLGEYLALTGEKLNGVEMIACGLATHYTLNGRLP 160 (338)
Q Consensus 81 ~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l~ 160 (338)
+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+++|++||+.++|+||+++|||+++||++++.
T Consensus 117 ~GgG~~LalacD~ria~~~a~f~~pe~~iGl~p~~g~~~~L~rl~g~~a~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~ 196 (379)
T PLN02874 117 MGGGAGLMVPMKFRVVTEKTVFATPEASVGFHTDCGFSYILSRLPGHLGEYLALTGARLNGKEMVACGLATHFVPSEKLP 196 (379)
T ss_pred EecHHHHHHhCCeEEEeCCeEEeccccccCcCCChhHHHHHHhhhHHHHHHHHHcCCcccHHHHHHcCCccEEeCHHHHH
Confidence 99999999999999999999999999999999999999999999986699999999999999999999999999999887
Q ss_pred HHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHHHhc
Q 019601 161 LVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKEA 240 (338)
Q Consensus 161 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~ 240 (338)
++...+.++...+...++.+++.|..........+.+..+.|.+||+.+++++|++++++..++..++||.+++++|+++
T Consensus 197 ~~~~~l~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~eii~al~~~~~~~~~~~A~~~a~~l~~~ 276 (379)
T PLN02874 197 ELEKRLLNLNSGDESAVQEAIEEFSKDVQADEDSILNKQSWINECFSKDTVEEIIKAFESEASKTGNEWIKETLKGLRRS 276 (379)
T ss_pred HHHHHHHhcCCCCHHHHHHHHHHhhcccCCCcchhHHHHHHHHHHhCCCCHHHHHHHHhhcccccccHHHHHHHHHHHhc
Confidence 76667767777777888999999886544555666677899999999999999999999876666789999999999999
Q ss_pred CchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCCCCCCCCCCCHHHHhcccCCC
Q 019601 241 SPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDPPSLADVSKDMVDCYFSPF 320 (338)
Q Consensus 241 sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~~~~~~~~~~~~~~~~~~~~~ 320 (338)
||.+++.+|++++.....++.++++.|+.+....+....++|++||+++|+++|+|+|+|+++++++|++++|+++|.|+
T Consensus 277 sP~al~~tk~~~~~~~~~~l~~~l~~e~~~~~~~~~~~~~~D~~EGv~AflidK~r~P~w~~~~~~~v~~~~v~~~f~~~ 356 (379)
T PLN02874 277 SPTGLKITLRSIREGRKQSLAECLKKEFRLTMNILRSTVSDDVYEGIRALVIDKDNAPKWNPSTLDEVTDEKVDLVFQPF 356 (379)
T ss_pred ChHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHhcCcCcchhhccceEEEcCCCCCCCCCCChhhCCHHHHHHHhCCC
Confidence 99999999999999888899999999988876664212379999999999878878999999999999999999999997
Q ss_pred CCCCCCCCCCc
Q 019601 321 DELEPELQLPT 331 (338)
Q Consensus 321 ~~~~~~~~~~~ 331 (338)
.+ +-||++|.
T Consensus 357 ~~-~~~~~~~~ 366 (379)
T PLN02874 357 KA-REELQLPE 366 (379)
T ss_pred CC-ccccCCCc
Confidence 53 22499985
No 6
>PRK05617 3-hydroxyisobutyryl-CoA hydrolase; Provisional
Probab=100.00 E-value=2.8e-57 Score=434.01 Aligned_cols=310 Identities=39% Similarity=0.730 Sum_probs=271.0
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCC-CCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAG-RAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGI 79 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~ 79 (338)
|+.+|.++++.++.|+++++|||||.| ++||+|+|++++..............++.....++..+..++|||||+|||+
T Consensus 31 m~~~L~~~l~~~~~d~~vrvvVltg~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIAaVnG~ 110 (342)
T PRK05617 31 MIRAIDAALDAWEDDDAVAAVVIEGAGERGFCAGGDIRALYEAARAGDPLAADRFFREEYRLNALIARYPKPYIALMDGI 110 (342)
T ss_pred HHHHHHHHHHHHhhCCCeEEEEEEcCCCCceeCCcCHHHHHhhhccCCchhHHHHHHHHHHHHHHHHhCCCCEEEEEcCE
Confidence 678999999999999999999999999 9999999999875432111111112344555678889999999999999999
Q ss_pred cccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchHHHHHhhhCCCCCHHHHHHcCccceeccCCCh
Q 019601 80 TMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYLGEYLALTGEKLNGVEMIACGLATHYTLNGRL 159 (338)
Q Consensus 80 a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l 159 (338)
|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..++++++||+.++|+||+++|||++|||++++
T Consensus 111 a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~P~~g~~~~L~r~~g~~a~~llltG~~i~A~eA~~~GLv~~vv~~~~l 190 (342)
T PRK05617 111 VMGGGVGISAHGSHRIVTERTKMAMPETGIGFFPDVGGTYFLSRAPGALGTYLALTGARISAADALYAGLADHFVPSADL 190 (342)
T ss_pred EEccHhHHhhhCCEEEEcCCCEeeCCccccCcCCCccceeEehhcccHHHHHHHHcCCCCCHHHHHHcCCcceecCHHHH
Confidence 99999999999999999999999999999999999999999999988449999999999999999999999999999888
Q ss_pred hHHHHHHhhcccCC-hHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHHH
Q 019601 160 PLVEERVGKLITDD-PSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLK 238 (338)
Q Consensus 160 ~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~ 238 (338)
......+.+....+ .+.+..++.+|...... .++......|++||+++++++|+++|+++ .++||.+++++|+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~~~~~l~~~----~~~~a~~~a~~i~ 264 (342)
T PRK05617 191 PALLDALISLRWDSGADVVDAALAAFATPAPA--SELAAQRAWIDECFAGDTVEDIIAALEAD----GGEFAAKTADTLR 264 (342)
T ss_pred HHHHHHHHhcCCccchhHHHHHHHHhccCCCc--chhHHHHHHHHHHhCCCCHHHHHHHHHhc----cHHHHHHHHHHHH
Confidence 76655665544433 34567788888776444 38889999999999999999999999987 3589999999999
Q ss_pred hcCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCCCCCCCCCCCHHHHhcccC
Q 019601 239 EASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDPPSLADVSKDMVDCYFS 318 (338)
Q Consensus 239 ~~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~~~~~~~~~~~~~~~~~~~ 318 (338)
++||.+++.+|+++++....+++++++.|...+...+. ++|++||+++|+++|+|+|+|+++++++|++++|+++|.
T Consensus 265 ~~sp~a~~~~k~~l~~~~~~~l~~~~~~e~~~~~~~~~---~~d~~egv~afl~ek~r~p~~~~~~~~~~~~~~~~~~~~ 341 (342)
T PRK05617 265 SRSPTSLKVTLEQLRRARGLTLEECLRRELRLALAMLR---SPDFVEGVRAVLIDKDRNPKWSPATLEDVTPEDVEAFFA 341 (342)
T ss_pred hCCcHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHh---CCchhhccceEEEcCCCCCCCCCCChHhCCHHHHHHhhC
Confidence 99999999999999998888999999999999988875 999999999997565489999999999999999999998
Q ss_pred C
Q 019601 319 P 319 (338)
Q Consensus 319 ~ 319 (338)
|
T Consensus 342 ~ 342 (342)
T PRK05617 342 P 342 (342)
T ss_pred C
Confidence 7
No 7
>PLN02600 enoyl-CoA hydratase
Probab=100.00 E-value=1.1e-46 Score=347.08 Aligned_cols=227 Identities=22% Similarity=0.363 Sum_probs=204.5
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeC-CCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGA-GRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGI 79 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~ 79 (338)
|+++|.++++.++.|+++|+|||||. |++||+|+|++++... .......+...+..++..+..++|||||+|||+
T Consensus 23 ~~~~l~~~~~~~~~d~~vr~vVl~g~~g~~F~aG~Dl~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~ 98 (251)
T PLN02600 23 MLRGLRSAFEKIQADASARVVMLRSSVPGVFCAGADLKERRKM----SPSEVQKFVNSLRSTFSSLEALSIPTIAVVEGA 98 (251)
T ss_pred HHHHHHHHHHHHhhCCCceEEEEecCCCCceeeCcCHHHHhcc----ChHHHHHHHHHHHHHHHHHHhCCCCEEEEecCe
Confidence 67899999999999999999999998 4899999999987431 122334455666778889999999999999999
Q ss_pred cccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccCCC
Q 019601 80 TMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLNGR 158 (338)
Q Consensus 80 a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~ 158 (338)
|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. ++++++||+.++|+||+++||||++||+++
T Consensus 99 a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~G~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~ 178 (251)
T PLN02600 99 ALGGGLELALSCDLRICGEEAVFGLPETGLAIIPGAGGTQRLPRLVGRSRAKELIFTGRRIGAREAASMGLVNYCVPAGE 178 (251)
T ss_pred ecchhHHHHHhCCEEEeeCCCEEeCcccccCcCCCchHHHHHHHHhCHHHHHHHHHhCCccCHHHHHHcCCCcEeeChhH
Confidence 9999999999999999999999999999999999999999999999999 999999999999999999999999999887
Q ss_pred hhHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHHH
Q 019601 159 LPLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLK 238 (338)
Q Consensus 159 l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~ 238 (338)
+.+.. .+++++|+
T Consensus 179 ~~~~a-------------------------------------------------------------------~~~a~~la 191 (251)
T PLN02600 179 AYEKA-------------------------------------------------------------------LELAQEIN 191 (251)
T ss_pred HHHHH-------------------------------------------------------------------HHHHHHHH
Confidence 75322 25699999
Q ss_pred hcCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCCCCC
Q 019601 239 EASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDPP 303 (338)
Q Consensus 239 ~~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~~~~ 303 (338)
+.+|.+++.+|++++.....++.+.++.|...+..++. ++|++||+++|+ +| |+|.|+++
T Consensus 192 ~~~p~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~d~~eg~~af~-ek-r~p~~~~~ 251 (251)
T PLN02600 192 QKGPLAIKMAKKAINEGSEVDMASGLEIEEECYEQVLK---TKDRLEGLAAFA-EK-RKPVYTGK 251 (251)
T ss_pred hCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHh-cC-CCCCCCCC
Confidence 99999999999999988888999999999999988875 999999999999 98 89999753
No 8
>PRK09076 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.4e-46 Score=347.71 Aligned_cols=226 Identities=21% Similarity=0.312 Sum_probs=202.8
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCC-CCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAG-RAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGI 79 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~ 79 (338)
|+.+|.++++.++.|+++++|||||.| ++||+|+|++++... +......+...+..++.++.++||||||+|||+
T Consensus 30 ~~~~l~~al~~~~~d~~vrvvVl~g~g~~~F~aG~Dl~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~ 105 (258)
T PRK09076 30 SLQALKQLVLELNADKDVYALVITGDGEKFFSAGADLNLFADG----DKAVAREMARRFGEAFEALSAFRGVSIAAINGY 105 (258)
T ss_pred HHHHHHHHHHHHHhCCCceEEEEECCCCCceEeCcCHHHHhhc----ChhhHHHHHHHHHHHHHHHHhCCCCEEEEECCE
Confidence 578999999999999999999999999 799999999987431 112223344556678889999999999999999
Q ss_pred cccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccCCC
Q 019601 80 TMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLNGR 158 (338)
Q Consensus 80 a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~ 158 (338)
|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. ++++++||+.++|+||+++|||++|||+++
T Consensus 106 a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~ 185 (258)
T PRK09076 106 AMGGGLECALACDIRIAEEQAQMALPEASVGLLPCAGGTQNLPWLVGEGWAKRMILCGERVDAATALRIGLVEEVVEKGE 185 (258)
T ss_pred EecHHHHHHHhCCEEEecCCCEeeCcccccCCCCCccHHHHHHHHhCHHHHHHHHHcCCcCCHHHHHHCCCCceecCchh
Confidence 9999999999999999999999999999999999999999999999999 999999999999999999999999999887
Q ss_pred hhHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHHH
Q 019601 159 LPLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLK 238 (338)
Q Consensus 159 l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~ 238 (338)
+.+.. .+++++|+
T Consensus 186 l~~~a-------------------------------------------------------------------~~~a~~l~ 198 (258)
T PRK09076 186 AREAA-------------------------------------------------------------------LALAQKVA 198 (258)
T ss_pred HHHHH-------------------------------------------------------------------HHHHHHHH
Confidence 75322 25799999
Q ss_pred hcCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCCCC
Q 019601 239 EASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDP 302 (338)
Q Consensus 239 ~~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~~~ 302 (338)
+.+|.+++.+|++++.....++.+.++.|...+..++. ++|++||+++|+ +| |+|+|++
T Consensus 199 ~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~eg~~af~-~k-r~p~~~~ 257 (258)
T PRK09076 199 NQSPSAVAACKTLIQAARNGPRAAALALERELFVDLFD---TEDQREGVNAFL-EK-RAPQWKN 257 (258)
T ss_pred hCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc---CchHHHHHHHHh-cC-CCCCCCC
Confidence 99999999999999988888999999999998888875 999999999999 88 8999974
No 9
>PRK05980 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.1e-46 Score=348.94 Aligned_cols=228 Identities=23% Similarity=0.390 Sum_probs=203.1
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCC-CCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAG-RAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGI 79 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~ 79 (338)
|+.+|.++++.++.|+++++|||||.| ++||+|+|++++..............++..+..++..+..+||||||+|||+
T Consensus 31 ~~~~l~~~l~~~~~d~~v~~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~ 110 (260)
T PRK05980 31 LIDRLLARLDAIEVDESVRAVILTGAGDRAFSAGADIHEFSASVAAGADVALRDFVRRGQAMTARLEAFPKPVIAAVNGL 110 (260)
T ss_pred HHHHHHHHHHHHhhCCCcEEEEEEeCCCCceEcCcCHHHHhhhccccchhhHHHHHHHHHHHHHHHHhCCCCEEEEEcCE
Confidence 578999999999999999999999999 7999999999875421111112234555666778889999999999999999
Q ss_pred cccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccCCC
Q 019601 80 TMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLNGR 158 (338)
Q Consensus 80 a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~ 158 (338)
|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +++++++|+.++|+||+++|||++|||+++
T Consensus 111 a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~ 190 (260)
T PRK05980 111 AFGGGCEITEAVHLAIASERALFAKPEIRLGMPPTFGGTQRLPRLAGRKRALELLLTGDAFSAERALEIGLVNAVVPHEE 190 (260)
T ss_pred EEhhhhHHhHhCCEEEecCCCEecCcccccCCCCCchHhhHHHhhcCHHHHHHHHHcCCccCHHHHHHcCCCCcccCHHH
Confidence 9999999999999999999999999999999999999999999999999 999999999999999999999999999887
Q ss_pred hhHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHHH
Q 019601 159 LPLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLK 238 (338)
Q Consensus 159 l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~ 238 (338)
+.+.. .+++++++
T Consensus 191 l~~~a-------------------------------------------------------------------~~~a~~la 203 (260)
T PRK05980 191 LLPAA-------------------------------------------------------------------RALARRII 203 (260)
T ss_pred HHHHH-------------------------------------------------------------------HHHHHHHH
Confidence 65322 25689999
Q ss_pred hcCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCC
Q 019601 239 EASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKW 300 (338)
Q Consensus 239 ~~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~ 300 (338)
+.+|.+++.+|++++.....++.++++.|...+...+. ++|+++|+++|+ +| |+|.|
T Consensus 204 ~~~p~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~e~~~af~-~k-r~p~~ 260 (260)
T PRK05980 204 RHSPVAVAAILTAVTRGLNLSIAEGLLIESEQFARMAG---SADLREGLAAWI-ER-RRPAY 260 (260)
T ss_pred hCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc---ChhHHHHHHHHh-cc-CCCCC
Confidence 99999999999999998888999999999999888875 999999999999 88 89987
No 10
>PRK05862 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.4e-46 Score=347.67 Aligned_cols=225 Identities=20% Similarity=0.301 Sum_probs=201.0
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGIT 80 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a 80 (338)
|+.+|.++++.++.|+++|+|||+|.|++||+|+|++++... . ....+...+..++.+|..+||||||+|||+|
T Consensus 32 ~~~~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~----~--~~~~~~~~~~~~~~~l~~~~kpvIaav~G~a 105 (257)
T PRK05862 32 LMDELGAALAAFDADEGIGAIVITGSEKAFAAGADIKEMADL----S--FMDVYKGDYITNWEKVARIRKPVIAAVAGYA 105 (257)
T ss_pred HHHHHHHHHHHHhhCCCeeEEEEECCCCceECCcChHhHhcc----c--hhHHHHHHHHHHHHHHHhCCCCEEEEEccEE
Confidence 578999999999999999999999999999999999987531 1 1112223344567789999999999999999
Q ss_pred ccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccCCCh
Q 019601 81 MGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLNGRL 159 (338)
Q Consensus 81 ~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l 159 (338)
+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. ++++++||+.++|+||+++|||+++||++++
T Consensus 106 ~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l 185 (257)
T PRK05862 106 LGGGCELAMMCDIIIAADTAKFGQPEIKLGVLPGMGGSQRLTRAVGKAKAMDLCLTGRMMDAAEAERAGLVSRVVPADKL 185 (257)
T ss_pred eHHHHHHHHHCCEEEEeCCCEEeCchhccCcCCCccHHHHHHHHhCHHHHHHHHHhCCccCHHHHHHcCCCCEeeCHhHH
Confidence 999999999999999999999999999999999999999999999999 9999999999999999999999999998877
Q ss_pred hHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHHHh
Q 019601 160 PLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKE 239 (338)
Q Consensus 160 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~ 239 (338)
.+.. .++++++++
T Consensus 186 ~~~a-------------------------------------------------------------------~~~a~~l~~ 198 (257)
T PRK05862 186 LDEA-------------------------------------------------------------------LAAATTIAS 198 (257)
T ss_pred HHHH-------------------------------------------------------------------HHHHHHHHh
Confidence 5322 256899999
Q ss_pred cCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCCCCC
Q 019601 240 ASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDPP 303 (338)
Q Consensus 240 ~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~~~~ 303 (338)
.+|.++..+|++++.....++.++++.|...+...+. ++|+++|+++|+ +| |+|.|+++
T Consensus 199 ~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---s~~~~e~i~af~-~k-r~p~~~~~ 257 (257)
T PRK05862 199 FSLPAVMMAKEAVNRAYETTLAEGLLFERRLFHSLFA---TEDQKEGMAAFV-EK-RKPVFKHR 257 (257)
T ss_pred CCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc---ChhHHHHHHHHh-cc-CCCCCCCC
Confidence 9999999999999998888999999999998888875 999999999999 98 89999853
No 11
>PRK07658 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.4e-46 Score=347.53 Aligned_cols=227 Identities=22% Similarity=0.329 Sum_probs=204.1
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGIT 80 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a 80 (338)
|+.+|.++++.++.|+++++|||+|.|++||+|+|++++.... .......+......++.++..+||||||+|||+|
T Consensus 29 ~~~~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~kpvIAav~G~a 105 (257)
T PRK07658 29 VLHELSELLDQVEKDDNVRVVVIHGEGRFFSAGADIKEFTSVT---EAEQATELAQLGQVTFERVEKFSKPVIAAIHGAA 105 (257)
T ss_pred HHHHHHHHHHHHHhCCCceEEEEECCCCceEeCcCHHHHhccC---chhhHHHHHHHHHHHHHHHHhCCCCEEEEEcCee
Confidence 5789999999999999999999999999999999999875321 1122333445567788899999999999999999
Q ss_pred ccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccCCCh
Q 019601 81 MGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLNGRL 159 (338)
Q Consensus 81 ~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l 159 (338)
+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. ++++++||+.++|+||+++|||+++||++++
T Consensus 106 ~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l 185 (257)
T PRK07658 106 LGGGLELAMSCHIRFATESAKLGLPELNLGLIPGFAGTQRLPRYVGKAKALEMMLTSEPITGAEALKWGLVNGVFPEETL 185 (257)
T ss_pred eeHHHHHHHhCCEEEecCCCcccCcccccCCCCCCcHHHHHHHHhCHHHHHHHHHcCCCcCHHHHHHcCCcCeecChhHH
Confidence 999999999999999999999999999999999999999999999999 9999999999999999999999999998877
Q ss_pred hHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHHHh
Q 019601 160 PLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKE 239 (338)
Q Consensus 160 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~ 239 (338)
.+.. .+++++|++
T Consensus 186 ~~~a-------------------------------------------------------------------~~~a~~l~~ 198 (257)
T PRK07658 186 LDDA-------------------------------------------------------------------KKLAKKIAG 198 (257)
T ss_pred HHHH-------------------------------------------------------------------HHHHHHHHh
Confidence 5322 256899999
Q ss_pred cCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCCCC
Q 019601 240 ASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDP 302 (338)
Q Consensus 240 ~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~~~ 302 (338)
.+|.+++.+|++++.....++.++++.|...+..++. ++|+++|+++|+ +| |+|+|++
T Consensus 199 ~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~egi~af~-~k-r~p~~~~ 256 (257)
T PRK07658 199 KSPATTRAVLELLQTTKSSSYYEGVKREAKIFGEVFT---SEDAKEGVQAFL-EK-RKPSFSG 256 (257)
T ss_pred CCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHH-cC-CCCCCCC
Confidence 9999999999999988888999999999999988875 999999999999 88 8999975
No 12
>PRK06142 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2e-46 Score=349.21 Aligned_cols=230 Identities=21% Similarity=0.289 Sum_probs=202.8
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhcc-------CChhhHHHHHHHHHHHHHHHhhCCCCEE
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNE-------GKFEDFKNFFETLYQFVYLQGTFVKPHV 73 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~i~~~~kP~I 73 (338)
|+.+|.++++.++.|+++++|||||.|++||+|+|++++...... ........+...+.+++..+..+|||||
T Consensus 34 ~~~~l~~~l~~~~~d~~vr~vVl~g~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kpvI 113 (272)
T PRK06142 34 FWSELPEIFRWLDADPEVRAVVLSGSGKHFSYGIDLPAMAGVFGQLGKDGLARPRTDLRREILRLQAAINAVADCRKPVI 113 (272)
T ss_pred HHHHHHHHHHHHhhCCCeEEEEEECCCCceecccCHHHHhhhcccccccccccchHHHHHHHHHHHHHHHHHHhCCCCEE
Confidence 578999999999999999999999999999999999987542100 0112233344556778889999999999
Q ss_pred EEEccccccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccce
Q 019601 74 AILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATH 152 (338)
Q Consensus 74 aav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~ 152 (338)
|+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. ++++++||+.++|+||+++||||+
T Consensus 114 Aav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~G~~~a~~l~l~g~~~~a~eA~~~GLv~~ 193 (272)
T PRK06142 114 AAVQGWCIGGGVDLISACDMRYASADAKFSVREVDLGMVADVGSLQRLPRIIGDGHLRELALTGRDIDAAEAEKIGLVNR 193 (272)
T ss_pred EEecCccccchHHHHHhCCEEEecCCCeecchhhhhCCCCCchHHHHHHHHhCHHHHHHHHHhCCCcCHHHHHHcCCccE
Confidence 9999999999999999999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred eccC-CChhHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHH
Q 019601 153 YTLN-GRLPLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCR 231 (338)
Q Consensus 153 vv~~-~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~ 231 (338)
|||+ +++.+.. .
T Consensus 194 vv~~~~~l~~~a-------------------------------------------------------------------~ 206 (272)
T PRK06142 194 VYDDADALLAAA-------------------------------------------------------------------H 206 (272)
T ss_pred ecCCHHHHHHHH-------------------------------------------------------------------H
Confidence 9996 6665322 2
Q ss_pred HHHHHHHhcCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCCCC
Q 019601 232 KAVEKLKEASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDP 302 (338)
Q Consensus 232 ~~a~~i~~~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~~~ 302 (338)
+++++|++.||.+++.+|++++.....++.++++.|...+...+. ++|++||+++|+ +| |+|+|++
T Consensus 207 ~~a~~ia~~~~~a~~~~K~~l~~~~~~~l~~~~~~~~~~~~~~~~---~~d~~egv~af~-~k-r~p~~~~ 272 (272)
T PRK06142 207 ATAREIAAKSPLAVRGTKEVLDYMRDHRVADGLRYVATWNAAMLP---SKDLTEAIAAHM-EK-RPPEFTG 272 (272)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhc---CccHHHHHHHHh-cC-CCCCCCC
Confidence 568999999999999999999988888999999999988888775 999999999999 88 8999963
No 13
>PRK08258 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.3e-46 Score=349.67 Aligned_cols=230 Identities=21% Similarity=0.277 Sum_probs=203.5
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGIT 80 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a 80 (338)
|+.+|.++++.++.|+++++|||||.|++||+|+|++++.......+......+...+..++..+..++|||||+|||+|
T Consensus 45 ~~~eL~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a 124 (277)
T PRK08258 45 SYAELRDLFRELVYADDVKAVVLTGAGGNFCSGGDVHEIIGPLTKMDMPELLAFTRMTGDLVKAMRACPQPIIAAVDGVC 124 (277)
T ss_pred HHHHHHHHHHHHhcCCCceEEEEeCCCCCcccccCHHHHhccccccChhHHHHHHHHHHHHHHHHHhCCCCEEEEECCee
Confidence 57899999999999999999999999999999999998743211111222334455566788899999999999999999
Q ss_pred ccchhhhhhcCCeEEEeCceeEecCCCCcCcCC-CcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccCCC
Q 019601 81 MGCGAGISLQGMYRVVTDKTVFSNPETQMGFHP-DAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLNGR 158 (338)
Q Consensus 81 ~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p-~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~ 158 (338)
+|||++|+++||+|||+++++|++||+++|++| ++|++++|++++|.. ++++++||+.++|+||+++|||++|||+++
T Consensus 125 ~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~ 204 (277)
T PRK08258 125 AGAGAILAMASDLRLGTPSAKTAFLFTRVGLAGADMGACALLPRIIGQGRASELLYTGRSMSAEEGERWGFFNRLVEPEE 204 (277)
T ss_pred ehHHHHHHHhCCEEEecCCCEEeccccccCcCCCCchHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCCcEecCHHH
Confidence 999999999999999999999999999999995 788999999999999 999999999999999999999999999877
Q ss_pred hhHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHHH
Q 019601 159 LPLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLK 238 (338)
Q Consensus 159 l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~ 238 (338)
+.+.. .+++++|+
T Consensus 205 l~~~a-------------------------------------------------------------------~~~a~~la 217 (277)
T PRK08258 205 LLAEA-------------------------------------------------------------------QALARRLA 217 (277)
T ss_pred HHHHH-------------------------------------------------------------------HHHHHHHH
Confidence 65322 25699999
Q ss_pred hcCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCCCC
Q 019601 239 EASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDP 302 (338)
Q Consensus 239 ~~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~~~ 302 (338)
+.||.+++.+|++++.....++++.++.|...+..++. ++|++||+++|+ +| |+|.|++
T Consensus 218 ~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---s~d~~eg~~af~-ek-r~p~~~~ 276 (277)
T PRK08258 218 AGPTFAHGMTKTMLHQEWDMGLEEAIEAEAQAQAICMQ---TEDFRRAYEAFV-AK-RKPVFEG 276 (277)
T ss_pred hCCHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHhc---CchHHHHHHHHh-cC-CCCCCCC
Confidence 99999999999999998888999999999999888875 999999999999 98 8999975
No 14
>PRK08150 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.9e-46 Score=344.92 Aligned_cols=224 Identities=23% Similarity=0.254 Sum_probs=199.9
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGIT 80 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a 80 (338)
|+.+|.++++.++ +++|+|||||.|++||+|+|++++... .......+...++.++.++.+++|||||+|||+|
T Consensus 30 ~~~~l~~al~~~~--~~vr~vvltg~g~~F~aG~Dl~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a 103 (255)
T PRK08150 30 LIAALRAAFARLP--EGVRAVVLHGEGDHFCAGLDLSELRER----DAGEGMHHSRRWHRVFDKIQYGRVPVIAALHGAV 103 (255)
T ss_pred HHHHHHHHHHHhh--cCCeEEEEECCCCceecCcCHHHHhhc----cchhHHHHHHHHHHHHHHHHhCCCCEEEEECCEE
Confidence 5789999999987 789999999999999999999987532 1112233445567788899999999999999999
Q ss_pred ccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccCCCh
Q 019601 81 MGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLNGRL 159 (338)
Q Consensus 81 ~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l 159 (338)
+|||++|+++||+||++++++|++||+++|++|++|+++++++++|.. ++++++||+.++|+||+++||||++||++++
T Consensus 104 ~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l 183 (255)
T PRK08150 104 VGGGLELASAAHIRVADESTYFALPEGQRGIFVGGGGSVRVPRLIGVARMTDMMLTGRVYDAQEGERLGLAQYLVPAGEA 183 (255)
T ss_pred EcHHHHHHHhCCEEEEeCCCEEeccccccCCCCCccHHHHHHHHhCHHHHHHHHHcCCcCCHHHHHHcCCccEeeCchHH
Confidence 999999999999999999999999999999999999999999999999 9999999999999999999999999999887
Q ss_pred hHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHHHh
Q 019601 160 PLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKE 239 (338)
Q Consensus 160 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~ 239 (338)
.+.. .+++++|++
T Consensus 184 ~~~a-------------------------------------------------------------------~~~a~~la~ 196 (255)
T PRK08150 184 LDKA-------------------------------------------------------------------MELARRIAQ 196 (255)
T ss_pred HHHH-------------------------------------------------------------------HHHHHHHHh
Confidence 5422 256999999
Q ss_pred cCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCCCC
Q 019601 240 ASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDP 302 (338)
Q Consensus 240 ~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~~~ 302 (338)
++|.+++.+|++++.....+++++++.|...+...+. ++|++||+++|+ +| |+|.|++
T Consensus 197 ~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---s~d~~eg~~af~-~k-r~p~~~~ 254 (255)
T PRK08150 197 NAPLTNFAVLNALPRIADMSADDGLFVESLMAAVAQS---APEAKERLRAFL-EK-KAAKVKP 254 (255)
T ss_pred CCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHh-cc-CCCCCCC
Confidence 9999999999999988888999999999887777664 899999999999 88 8999975
No 15
>PLN02664 enoyl-CoA hydratase/delta3,5-delta2,4-dienoyl-CoA isomerase
Probab=100.00 E-value=2.5e-46 Score=349.04 Aligned_cols=230 Identities=24% Similarity=0.336 Sum_probs=202.0
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccC---C----hhhHHHHHHHHHHHHHHHhhCCCCEE
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEG---K----FEDFKNFFETLYQFVYLQGTFVKPHV 73 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~---~----~~~~~~~~~~~~~~~~~i~~~~kP~I 73 (338)
|+.+|.++++.++.|+++++|||||.|++||+|+|++++....... + ......+...++.++..+.++|||||
T Consensus 36 ~~~~l~~al~~~~~d~~vrvvVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvI 115 (275)
T PLN02664 36 FFTEFPKALSSLDQNPNVSVIILSGAGDHFCSGIDLKTLNSISEQSSSGDRGRSGERLRRKIKFLQDAITAIEQCRKPVI 115 (275)
T ss_pred HHHHHHHHHHHHHhCCCcEEEEEECCCCceeeCcChHHhhhcccccccccchhhHHHHHHHHHHHHHHHHHHHhCCCCEE
Confidence 5789999999999999999999999999999999999875421100 0 11223344555678888999999999
Q ss_pred EEEccccccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccce
Q 019601 74 AILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATH 152 (338)
Q Consensus 74 aav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~ 152 (338)
|+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. ++++++||+.++|+||+++|||++
T Consensus 116 aav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~A~~l~ltg~~~~a~eA~~~GLv~~ 195 (275)
T PLN02664 116 AAIHGACIGGGVDIVTACDIRYCSEDAFFSVKEVDLAITADLGTLQRLPSIVGYGNAMELALTGRRFSGSEAKELGLVSR 195 (275)
T ss_pred EEECCccccchHHHHHhCCEEEecCCCEeccHHHhhCCCCCccHHHHHHHHhCHHHHHHHHHhCCCCCHHHHHHcCCCce
Confidence 9999999999999999999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred eccC-CChhHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHH
Q 019601 153 YTLN-GRLPLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCR 231 (338)
Q Consensus 153 vv~~-~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~ 231 (338)
+||+ +++.+.. .
T Consensus 196 vv~~~~~l~~~~-------------------------------------------------------------------~ 208 (275)
T PLN02664 196 VFGSKEDLDEGV-------------------------------------------------------------------R 208 (275)
T ss_pred eeCChhHHHHHH-------------------------------------------------------------------H
Confidence 9995 6665322 2
Q ss_pred HHHHHHHhcCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCCCC
Q 019601 232 KAVEKLKEASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDP 302 (338)
Q Consensus 232 ~~a~~i~~~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~~~ 302 (338)
+++++|+..+|.+++.+|++++.....++.++++.|...+...+. ++|++||+++|+ +| |+|.|++
T Consensus 209 ~~a~~ia~~~p~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~d~~eg~~af~-ek-r~p~~~~ 274 (275)
T PLN02664 209 LIAEGIAAKSPLAVTGTKAVLLRSRELSVEQGLDYVATWNSAMLV---SDDLNEAVSAQI-QK-RKPVFAK 274 (275)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcc---ChhHHHHHHHHh-cc-CCCCCCC
Confidence 569999999999999999999988888999999999988877764 999999999999 88 8999974
No 16
>KOG1680 consensus Enoyl-CoA hydratase [Lipid transport and metabolism]
Probab=100.00 E-value=3e-47 Score=341.98 Aligned_cols=224 Identities=24% Similarity=0.355 Sum_probs=199.8
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGIT 80 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a 80 (338)
|+.+|.+++..++.|+++.++||||.|++||+|+|++++..... .+-.. ..+.+....+...+||+||+|||+|
T Consensus 65 ~m~eL~~A~~~~e~D~s~~viVltG~gksFcsG~Dl~e~~~~~~---~~~~~---~~~~~~~~~~~~~~KPvIaainG~A 138 (290)
T KOG1680|consen 65 TMLELAEAFKDFESDDSVGVIVLTGSGKSFCSGADLKEMKKDEF---QDVSD---GIFLRVWDLVSRLKKPVIAAINGFA 138 (290)
T ss_pred HHHHHHHHHHHhhccCcccEEEEEcCCCccccccCHHHHhhccc---ccccc---ccccchhhhhhhcccceeEeeecee
Confidence 57899999999999999999999999999999999999865221 11111 1122334445589999999999999
Q ss_pred ccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccCCCh
Q 019601 81 MGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLNGRL 159 (338)
Q Consensus 81 ~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l 159 (338)
+|||++|+++||+|||+++|+|++++.++|++|.+|++.+|+|.+|.+ |+++++||++++|+||+++|||++|||.+++
T Consensus 139 lgGG~ELalmCDirva~~~Akfg~~~~~~Gi~p~~GGT~rl~r~vG~s~Ale~~ltg~~~~AqeA~~~GlVn~Vvp~~~~ 218 (290)
T KOG1680|consen 139 LGGGLELALMCDIRVAGEGAKFGFFEIRMGIIPSWGGTQRLPRIVGKSRALEMILTGRRLGAQEAKKIGLVNKVVPSGDA 218 (290)
T ss_pred eccchhhhhhcceEeccCCCeecccccccCCccCCCchhhHHHHhChHHHHHHHHhcCcccHHHHHhCCceeEeecchhH
Confidence 999999999999999999999999999999999999999999999999 9999999999999999999999999999986
Q ss_pred hHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHHHh
Q 019601 160 PLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKE 239 (338)
Q Consensus 160 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~ 239 (338)
.. +++ +++++|++
T Consensus 219 l~--eAv-----------------------------------------------------------------~l~~~Ia~ 231 (290)
T KOG1680|consen 219 LG--EAV-----------------------------------------------------------------KLAEQIAK 231 (290)
T ss_pred HH--HHH-----------------------------------------------------------------HHHHHHHh
Confidence 43 332 67999999
Q ss_pred cCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCCCC
Q 019601 240 ASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDP 302 (338)
Q Consensus 240 ~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~~~ 302 (338)
+||.++++.|+.++.+.+.++.+++..|..++...+. .+|.+||+.+|. +| |+|+|+.
T Consensus 232 ~~~~~v~~~K~svn~~~e~~l~e~l~~e~~~~~s~~~---~~d~~Eg~~~f~-~k-r~~~~~k 289 (290)
T KOG1680|consen 232 NSPLVVRADKESVNAAYETTLFEGLELERDLFGSTFA---TEDRLEGMTAFA-EK-RKPKFSK 289 (290)
T ss_pred CCHHHHHHHHHHHHHHhhccHHHHHHhhhhhhhhhhh---hHHHHHHHHHhc-cc-CCccccc
Confidence 9999999999999999999999999999999988876 999999999998 98 9999984
No 17
>PRK09674 enoyl-CoA hydratase-isomerase; Provisional
Probab=100.00 E-value=3e-46 Score=344.99 Aligned_cols=224 Identities=23% Similarity=0.320 Sum_probs=200.8
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGIT 80 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a 80 (338)
|+.+|.++++.++.|+++|+|||||.|++||+|+|++++... + ....+......++..+..+||||||+|||+|
T Consensus 30 ~~~~L~~~~~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~----~--~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a 103 (255)
T PRK09674 30 LLTQLVNELEAAATDTSIGVCVITGNARFFAAGADLNEMAEK----D--LAATLNDPRPQLWQRLQAFNKPLIAAVNGYA 103 (255)
T ss_pred HHHHHHHHHHHHhhCCCcEEEEEECCCCceecccChHhHhcc----c--hhhhHHHHHHHHHHHHHhCCCCEEEEECCEe
Confidence 578999999999999999999999999999999999987431 1 1112223345677889999999999999999
Q ss_pred ccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccCCCh
Q 019601 81 MGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLNGRL 159 (338)
Q Consensus 81 ~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l 159 (338)
+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +++++++|+.++|+||+++|||++|||++++
T Consensus 104 ~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~ig~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~~ 183 (255)
T PRK09674 104 LGAGCELALLCDIVIAGENARFGLPEITLGIMPGAGGTQRLIRSVGKSLASQMVLTGESITAQQAQQAGLVSEVFPPELT 183 (255)
T ss_pred ehHHHHHHHhCCEEEecCCCEEeCchhhcCCCCCccHHHHHHHHhCHHHHHHHHHcCCccCHHHHHHcCCCcEecChHHH
Confidence 999999999999999999999999999999999999999999999999 9999999999999999999999999998877
Q ss_pred hHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHHHh
Q 019601 160 PLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKE 239 (338)
Q Consensus 160 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~ 239 (338)
.+. +.+++++|++
T Consensus 184 ~~~-------------------------------------------------------------------a~~~a~~l~~ 196 (255)
T PRK09674 184 LER-------------------------------------------------------------------ALQLASKIAR 196 (255)
T ss_pred HHH-------------------------------------------------------------------HHHHHHHHHh
Confidence 532 2357999999
Q ss_pred cCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCCCC
Q 019601 240 ASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDP 302 (338)
Q Consensus 240 ~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~~~ 302 (338)
.+|.+++.+|++++.....++.++++.|...+...+. ++|+++|+++|+ +| |+|.|++
T Consensus 197 ~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~e~i~af~-~k-r~p~~~~ 254 (255)
T PRK09674 197 HSPLALRAAKQALRQSQEVDLQAGLAQERQLFTLLAA---TEDRHEGISAFL-EK-RTPDFKG 254 (255)
T ss_pred CCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHh-cc-CCCCCCC
Confidence 9999999999999988888999999999998888775 999999999999 88 8999975
No 18
>PRK07657 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4.4e-46 Score=344.84 Aligned_cols=227 Identities=22% Similarity=0.360 Sum_probs=204.6
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCC-CCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAG-RAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGI 79 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~ 79 (338)
|+.+|.++++.++.|+++++|||||.| ++||+|+|++++... .......+...++.++..+..+||||||+|||+
T Consensus 32 ~~~~l~~al~~~~~d~~v~~vVl~g~g~~~F~aG~Dl~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~ 107 (260)
T PRK07657 32 LLEELQNILTQINEEANVRVVILTGAGEKAFCAGADLKERAGM----NEEQVRHAVSLIRTTMEMVEQLPQPVIAAINGI 107 (260)
T ss_pred HHHHHHHHHHHHHhCCCeEEEEEecCCCCceEcCcChHhhhcC----ChhhHHHHHHHHHHHHHHHHhCCCCEEEEEcCE
Confidence 578999999999999999999999999 699999999987531 122334455666788889999999999999999
Q ss_pred cccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccCCC
Q 019601 80 TMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLNGR 158 (338)
Q Consensus 80 a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~ 158 (338)
|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. ++++++||+.++|+||+++|||+++||+++
T Consensus 108 a~GgG~~lal~cD~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~ 187 (260)
T PRK07657 108 ALGGGLELALACDFRIAAESASLGLTETTLAIIPGAGGTQRLPRLIGVGRAKELIYTGRRISAQEAKEIGLVEFVVPAHL 187 (260)
T ss_pred eechHHHHHHhCCEEEeeCCCEEcCchhccCcCCCccHHHHHHHHhCHHHHHHHHHhCCCCCHHHHHHcCCCCeecCHHH
Confidence 9999999999999999999999999999999999999999999999999 999999999999999999999999999887
Q ss_pred hhHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHHH
Q 019601 159 LPLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLK 238 (338)
Q Consensus 159 l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~ 238 (338)
+.+.. .+++++|+
T Consensus 188 l~~~a-------------------------------------------------------------------~~~a~~l~ 200 (260)
T PRK07657 188 LEEKA-------------------------------------------------------------------IEIAEKIA 200 (260)
T ss_pred HHHHH-------------------------------------------------------------------HHHHHHHH
Confidence 75422 25689999
Q ss_pred hcCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCCCCC
Q 019601 239 EASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDPP 303 (338)
Q Consensus 239 ~~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~~~~ 303 (338)
..+|.+++.+|++++.....++.++++.|...+...+. ++|++||+++|+ +| |+|.|+++
T Consensus 201 ~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~e~~~af~-~~-r~~~~~~~ 260 (260)
T PRK07657 201 SNGPIAVRQAKEAISNGIQVDLHTGLQIEKQAYEGTIP---TKDRLEGLQAFK-EK-RKPMYKGE 260 (260)
T ss_pred hCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhc---CHhHHHHHHHHh-cC-CCCCCCCC
Confidence 99999999999999998888999999999998888875 999999999999 88 89999753
No 19
>PRK09245 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=3.7e-46 Score=346.39 Aligned_cols=230 Identities=22% Similarity=0.364 Sum_probs=201.6
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhcc--CChhh-HHHHHHHHHHHHHHHhhCCCCEEEEEc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNE--GKFED-FKNFFETLYQFVYLQGTFVKPHVAILD 77 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~i~~~~kP~Iaav~ 77 (338)
|+.+|.+++++++.|+++++|||+|.|++||+|+|++++...... ..... ...+...+..++..+..+||||||+||
T Consensus 32 ~~~~l~~~l~~~~~d~~vr~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kpvIaav~ 111 (266)
T PRK09245 32 AVDALVAACAAINADRSVRAVILTGAGTAFSSGGNVKDMRARVGAFGGSPADIRQGYRHGIQRIPLALYNLEVPVIAAVN 111 (266)
T ss_pred HHHHHHHHHHHHhcCCCceEEEEECCCCCcccCcCHHHHhhccccccccchhHHHHHHHHHHHHHHHHHcCCCCEEEEEC
Confidence 578999999999999999999999999999999999987532110 01111 122333456778889999999999999
Q ss_pred cccccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccC
Q 019601 78 GITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLN 156 (338)
Q Consensus 78 G~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~ 156 (338)
|+|+|||++|+++||+|||+++++|++||+++|++|++|+++++++++|.. +++++++|+.++|+||+++|||++|||+
T Consensus 112 G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~ 191 (266)
T PRK09245 112 GPAIGAGCDLACMCDIRIASETARFAESFVKLGLIPGDGGAWLLPRIIGMARAAEMAFTGDAIDAATALEWGLVSRVVPA 191 (266)
T ss_pred CEeecHHHHHHHhCCEEEecCCCEEcccccccCcCCCcchhhhHHHHhhHHHHHHHHHcCCCcCHHHHHHcCCcceecCH
Confidence 999999999999999999999999999999999999999999999999999 9999999999999999999999999998
Q ss_pred CChhHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHH
Q 019601 157 GRLPLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEK 236 (338)
Q Consensus 157 ~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~ 236 (338)
+++.+.. .+++++
T Consensus 192 ~~l~~~a-------------------------------------------------------------------~~~a~~ 204 (266)
T PRK09245 192 DQLLPAA-------------------------------------------------------------------RALAER 204 (266)
T ss_pred HHHHHHH-------------------------------------------------------------------HHHHHH
Confidence 8775422 256999
Q ss_pred HHhcCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCCCC
Q 019601 237 LKEASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDP 302 (338)
Q Consensus 237 i~~~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~~~ 302 (338)
|++.||.+++.+|++++.....++.+.++.|...+...+. ++|++||+++|+ +| |+|.|+.
T Consensus 205 l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~d~~eg~~af~-~k-r~p~~~~ 265 (266)
T PRK09245 205 IAANPPHALRLTKRLLREGQHASLDTLLELSAAYQALAHH---TADHREAVDAFL-EK-RPPVFTG 265 (266)
T ss_pred HHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhc---CHhHHHHHHHHH-cC-CCCCCCC
Confidence 9999999999999999988888999999999888877764 999999999999 88 8999975
No 20
>TIGR02280 PaaB1 phenylacetate degradation probable enoyl-CoA hydratase paaB. This family of proteins are found within apparent operons for the degradation of phenylacetic acid. These proteins contain the enoyl-CoA hydratase domain as detected by pfam00378. This activity is consistent with current hypotheses for the degradation pathway which involve the ligation of phenylacetate with coenzyme A (paaF), hydroxylation (paaGHIJK), ring-opening (paaN) and degradation of the resulting fatty acid-like compound to a Krebs cycle intermediate (paaABCDE).
Probab=100.00 E-value=4.5e-46 Score=344.02 Aligned_cols=228 Identities=25% Similarity=0.315 Sum_probs=200.3
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGIT 80 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a 80 (338)
|+.+|.++++.++.|+ +++|||||.|++||+|+|++++.... ....+....+...+..++..+..+||||||+|||+|
T Consensus 27 ~~~~l~~~l~~~~~d~-v~~vVltg~g~~F~aG~Dl~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a 104 (256)
T TIGR02280 27 MHLELREALERVERDD-ARALMLTGAGRGFCAGQDLSERNPTP-GGAPDLGRTIETFYNPLVRRLRALPLPVVCAVNGVA 104 (256)
T ss_pred HHHHHHHHHHHHhcCC-cEEEEEECCCCCcccCcCHHHHhhcc-ccchhHHHHHHHHHHHHHHHHHhCCCCEEEEECCee
Confidence 5789999999999998 99999999999999999999875321 111111112222345677889999999999999999
Q ss_pred ccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccCCCh
Q 019601 81 MGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLNGRL 159 (338)
Q Consensus 81 ~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l 159 (338)
+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +++++++|+.++|+||+++|||+++||++++
T Consensus 105 ~GgG~~lala~D~ria~~~a~f~~pe~~lG~~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l 184 (256)
T TIGR02280 105 AGAGANLALACDIVLAAESARFIQAFAKIGLIPDSGGTWSLPRLVGRARAMGLAMLGEKLDARTAASWGLIWQVVDDAAL 184 (256)
T ss_pred ehHHHHHHHhCCEEEecCCCEEeChhhhcCCCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCcceeeChHHH
Confidence 999999999999999999999999999999999999999999999999 9999999999999999999999999998877
Q ss_pred hHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHHHh
Q 019601 160 PLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKE 239 (338)
Q Consensus 160 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~ 239 (338)
.+.. .+++++|++
T Consensus 185 ~~~a-------------------------------------------------------------------~~~a~~la~ 197 (256)
T TIGR02280 185 MDEA-------------------------------------------------------------------QALAVHLAA 197 (256)
T ss_pred HHHH-------------------------------------------------------------------HHHHHHHHh
Confidence 5322 256999999
Q ss_pred cCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCCCC
Q 019601 240 ASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDP 302 (338)
Q Consensus 240 ~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~~~ 302 (338)
.+|.+++.+|++++.....++.++++.|...+..++. ++|+++|+++|+ +| |+|.|++
T Consensus 198 ~~~~~~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~d~~eg~~af~-~k-r~p~~~~ 255 (256)
T TIGR02280 198 QPTRGLALTKRAIQAAATNSLDTQLDLERDLQRELGR---SADYAEGVTAFL-DK-RNPQFTG 255 (256)
T ss_pred CCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhc---ChhHHHHHHHHH-cC-CCCCCCC
Confidence 9999999999999988888999999999998888775 999999999999 88 8999975
No 21
>PRK06127 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4.5e-46 Score=346.32 Aligned_cols=229 Identities=21% Similarity=0.306 Sum_probs=204.2
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCC-CCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAG-RAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGI 79 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~ 79 (338)
|+.+|.++++.++.|+++++|||+|.| ++||+|+|++.+.... ...+....+......++..+..++|||||+|||+
T Consensus 39 ~~~~l~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~kPvIaav~G~ 116 (269)
T PRK06127 39 MWEALPQALAAAEDDDAIRVVVLTGAGEKAFVSGADISQFEESR--SDAEAVAAYEQAVEAAQAALADYAKPTIACIRGY 116 (269)
T ss_pred HHHHHHHHHHHHHhCCCcEEEEEEeCCCCceecCcCHHHHhhcc--cchHHHHHHHHHHHHHHHHHHhCCCCEEEEECCE
Confidence 578999999999999999999999998 8999999999875321 1122233445556678889999999999999999
Q ss_pred cccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccCCC
Q 019601 80 TMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLNGR 158 (338)
Q Consensus 80 a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~ 158 (338)
|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. ++++++||+.++|+||+++|||++|||+++
T Consensus 117 a~GgG~~LalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~ 196 (269)
T PRK06127 117 CIGGGMGIALACDIRIAAEDSRFGIPAARLGLGYGYDGVKNLVDLVGPSAAKDLFYTARRFDAAEALRIGLVHRVTAADD 196 (269)
T ss_pred EecHHHHHHHhCCEEEeeCCCEeeCchhhhCCCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCCCEeeCHHH
Confidence 9999999999999999999999999999999999999999999999999 999999999999999999999999999887
Q ss_pred hhHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHHH
Q 019601 159 LPLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLK 238 (338)
Q Consensus 159 l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~ 238 (338)
+.+.. .+++++++
T Consensus 197 l~~~a-------------------------------------------------------------------~~~a~~l~ 209 (269)
T PRK06127 197 LETAL-------------------------------------------------------------------ADYAATIA 209 (269)
T ss_pred HHHHH-------------------------------------------------------------------HHHHHHHH
Confidence 75422 25699999
Q ss_pred hcCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCCCCC
Q 019601 239 EASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDPP 303 (338)
Q Consensus 239 ~~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~~~~ 303 (338)
..+|.+++.+|++++.....++.+.++.|...+...+. ++|+++|+++|+ +| |+|.|+++
T Consensus 210 ~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~d~~e~~~af~-ek-r~p~~~~~ 269 (269)
T PRK06127 210 GNAPLTLRAAKRAIAELLKDEPERDMAACQALVAACFD---SEDYREGRAAFM-EK-RKPVFKGR 269 (269)
T ss_pred hCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhc---ChHHHHHHHHHh-cC-CCCCCCCC
Confidence 99999999999999998888999999999998888775 999999999999 98 89999753
No 22
>PRK08139 enoyl-CoA hydratase; Validated
Probab=100.00 E-value=5.6e-46 Score=345.09 Aligned_cols=226 Identities=19% Similarity=0.306 Sum_probs=201.5
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGIT 80 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a 80 (338)
|+.+|.++++.++.|++|++|||||.|++||+|+|++++... ...+....++..+.+++.++..+||||||+|||+|
T Consensus 39 ~~~~l~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a 115 (266)
T PRK08139 39 MLAALQAALDAIAADPSVRVVVLAAAGKAFCAGHDLKEMRAA---RGLAYFRALFARCSRVMQAIVALPQPVIARVHGIA 115 (266)
T ss_pred HHHHHHHHHHHHhcCCCeeEEEEecCCCcceeccCHHHHhcc---cchhHHHHHHHHHHHHHHHHHhCCCCEEEEECcee
Confidence 578999999999999999999999999999999999987431 11222344456667788899999999999999999
Q ss_pred ccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccCCCh
Q 019601 81 MGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLNGRL 159 (338)
Q Consensus 81 ~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l 159 (338)
+|||++|+++||+||++++++|++||+++|++|+++ +++|++++|.. ++++++||+.++|+||+++||||+|||++++
T Consensus 116 ~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~~-~~~l~r~vG~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l 194 (266)
T PRK08139 116 TAAGCQLVASCDLAVAADTARFAVPGVNIGLFCSTP-MVALSRNVPRKQAMEMLLTGEFIDAATAREWGLVNRVVPADAL 194 (266)
T ss_pred eHHHHHHHHhCCEEEEeCCCEEeCcccCcCCCCCcc-HHHHHHHhCHHHHHHHHHcCCccCHHHHHHcCCccEeeChhHH
Confidence 999999999999999999999999999999999875 46799999999 9999999999999999999999999998877
Q ss_pred hHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHHHh
Q 019601 160 PLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKE 239 (338)
Q Consensus 160 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~ 239 (338)
.+.. .+++++|++
T Consensus 195 ~~~a-------------------------------------------------------------------~~~a~~la~ 207 (266)
T PRK08139 195 DAAV-------------------------------------------------------------------ARLAAVIAA 207 (266)
T ss_pred HHHH-------------------------------------------------------------------HHHHHHHHh
Confidence 5422 256899999
Q ss_pred cCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCCCC
Q 019601 240 ASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDP 302 (338)
Q Consensus 240 ~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~~~ 302 (338)
.+|.+++.+|++++.....+++++++.|...+...+. ++|+++|+++|+ +| |+|+|++
T Consensus 208 ~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~d~~eg~~af~-~k-r~p~~~~ 265 (266)
T PRK08139 208 KSPAAVRIGKEAFYRQAEMPLADAYAYAGDVMAENMM---AEDAEEGIDAFL-EK-RPPEWRG 265 (266)
T ss_pred CCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhc---CchHHHHHHHHh-cC-CCCCCCC
Confidence 9999999999999998888999999999998887765 999999999999 88 8999975
No 23
>PRK07799 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=5.1e-46 Score=344.94 Aligned_cols=228 Identities=24% Similarity=0.332 Sum_probs=198.0
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHH-H-HHHHHHHHHHHhhCCCCEEEEEcc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKN-F-FETLYQFVYLQGTFVKPHVAILDG 78 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~i~~~~kP~Iaav~G 78 (338)
|+.+|.++++.++.|+++++|||||.|++||+|+|++++.... ... ..... + ...+.. +.++..+||||||+|||
T Consensus 33 ~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~-~~~-~~~~~~~~~~~~~~-~~~~~~~~kpvIaav~G 109 (263)
T PRK07799 33 MLRIMVDAWDRVDNDPDIRSCILTGAGGAFCAGMDLKAATKKP-PGD-SFKDGSYDPSRIDA-LLKGRRLTKPLIAAVEG 109 (263)
T ss_pred HHHHHHHHHHHHHhCCCceEEEEECCCCccccccCHHHHhhcc-ccc-hhhhhhhhhhHHHH-HHHHhcCCCCEEEEECC
Confidence 6789999999999999999999999999999999999875421 110 10101 1 112222 33578999999999999
Q ss_pred ccccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccCC
Q 019601 79 ITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLNG 157 (338)
Q Consensus 79 ~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~ 157 (338)
+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. ++++++||+.++|+||+++|||++|||++
T Consensus 110 ~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~ 189 (263)
T PRK07799 110 PAIAGGTEILQGTDIRVAGESAKFGISEAKWSLFPMGGSAVRLVRQIPYTVACDLLLTGRHITAAEAKEIGLIGHVVPDG 189 (263)
T ss_pred eEeccHHHHHHhCCEEEecCCCEecCcccccCcCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccEecCcc
Confidence 99999999999999999999999999999999999999999999999999 99999999999999999999999999998
Q ss_pred ChhHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHH
Q 019601 158 RLPLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKL 237 (338)
Q Consensus 158 ~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i 237 (338)
++.+ .+ .+++++|
T Consensus 190 ~l~~--~a-----------------------------------------------------------------~~~a~~~ 202 (263)
T PRK07799 190 QALD--KA-----------------------------------------------------------------LELAELI 202 (263)
T ss_pred hHHH--HH-----------------------------------------------------------------HHHHHHH
Confidence 8753 22 2568999
Q ss_pred HhcCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCCCCC
Q 019601 238 KEASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDPP 303 (338)
Q Consensus 238 ~~~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~~~~ 303 (338)
++.||.+++.+|++++.....++.++++.|...+..++. ++|+++|+++|+ +| |+|+|+.+
T Consensus 203 ~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---~~~~~egi~af~-~~-r~p~~~~~ 263 (263)
T PRK07799 203 NANGPLAVQAILRTIRETEGMHENEAFKIDTKIGIPVFL---SEDAKEGPRAFA-EK-RAPNFQGR 263 (263)
T ss_pred HhcChHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhc---CccHHHHHHHHH-cc-CCCCCCCC
Confidence 999999999999999988888999999999998888775 999999999999 88 89999753
No 24
>PRK08140 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4.7e-46 Score=344.99 Aligned_cols=229 Identities=24% Similarity=0.323 Sum_probs=199.8
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGIT 80 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a 80 (338)
|+.+|.+++++++ |+++++|||+|.|++||+|+|++++.........+....+...+..++..+..++|||||+|||+|
T Consensus 32 ~~~~l~~~~~~~~-d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a 110 (262)
T PRK08140 32 MHRELREALDQVE-DDGARALLLTGAGRGFCAGQDLADRDVTPGGAMPDLGESIETFYNPLVRRLRALPLPVIAAVNGVA 110 (262)
T ss_pred HHHHHHHHHHHhc-CCCceEEEEECCCCCcccCcChHHHhccccccchhhHHHHHHHHHHHHHHHHhCCCCEEEEECCee
Confidence 5789999999999 999999999999999999999998743110111111112222344577889999999999999999
Q ss_pred ccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccCCCh
Q 019601 81 MGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLNGRL 159 (338)
Q Consensus 81 ~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l 159 (338)
+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. ++++++||+.++|+||+++|||++|||++++
T Consensus 111 ~GgG~~lalacD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l 190 (262)
T PRK08140 111 AGAGANLALACDIVLAARSASFIQAFVKIGLVPDSGGTWFLPRLVGMARALGLALLGEKLSAEQAEQWGLIWRVVDDAAL 190 (262)
T ss_pred ehhHHHHHHhCCEEEecCCCEEeccccccCCCCCccHHHHHHHHhCHHHHHHHHHcCCCcCHHHHHHcCCccEeeChHHH
Confidence 999999999999999999999999999999999999999999999999 9999999999999999999999999998877
Q ss_pred hHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHHHh
Q 019601 160 PLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKE 239 (338)
Q Consensus 160 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~ 239 (338)
.+.. .+++++|++
T Consensus 191 ~~~a-------------------------------------------------------------------~~~a~~ia~ 203 (262)
T PRK08140 191 ADEA-------------------------------------------------------------------QQLAAHLAT 203 (262)
T ss_pred HHHH-------------------------------------------------------------------HHHHHHHHh
Confidence 5322 257999999
Q ss_pred cCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCCCC
Q 019601 240 ASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDP 302 (338)
Q Consensus 240 ~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~~~ 302 (338)
.+|.++..+|++++.....++.++++.|...+...+. ++|+++|+++|+ +| |+|.|++
T Consensus 204 ~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~e~~~af~-~k-r~p~~~~ 261 (262)
T PRK08140 204 QPTRGLALIKQAMNASATNTLDAQLDLERDLQREAGR---SADYAEGVSAFL-EK-RAPRFTG 261 (262)
T ss_pred CCHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHhc---ChhHHHHHHHHh-cC-CCCCCCC
Confidence 9999999999999988888999999999998888765 999999999999 88 8999975
No 25
>PRK08138 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=5.9e-46 Score=344.13 Aligned_cols=224 Identities=22% Similarity=0.343 Sum_probs=201.4
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGIT 80 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a 80 (338)
|+.+|.++++.++.|+++|+|||||.|++||+|+|++++... +....+...++.++..+..+||||||+|||+|
T Consensus 36 ~~~~l~~al~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~------~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a 109 (261)
T PRK08138 36 VRQQLAEHFTELSEDPDIRAIVLTGGEKVFAAGADIKEFATA------GAIEMYLRHTERYWEAIAQCPKPVIAAVNGYA 109 (261)
T ss_pred HHHHHHHHHHHHhhCCCeeEEEEECCCCCeeCCcCHHHHhcc------chhHHHHHHHHHHHHHHHhCCCCEEEEEccEE
Confidence 578999999999999999999999999999999999987531 11122344556788889999999999999999
Q ss_pred ccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccCCCh
Q 019601 81 MGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLNGRL 159 (338)
Q Consensus 81 ~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l 159 (338)
+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. ++++++||+.++|+||+++|||++|||++++
T Consensus 110 ~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l 189 (261)
T PRK08138 110 LGGGCELAMHADIIVAGESASFGQPEIKVGLMPGAGGTQRLVRAVGKFKAMRMALTGCMVPAPEALAIGLVSEVVEDEQT 189 (261)
T ss_pred EcHHHHHHHhCCEEEecCCCEeeCcccccccCCCCcHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHCCCCcEecCchHH
Confidence 999999999999999999999999999999999999999999999999 9999999999999999999999999998876
Q ss_pred hHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHHHh
Q 019601 160 PLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKE 239 (338)
Q Consensus 160 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~ 239 (338)
.+.. .++++++++
T Consensus 190 ~~~a-------------------------------------------------------------------~~~a~~l~~ 202 (261)
T PRK08138 190 LPRA-------------------------------------------------------------------LELAREIAR 202 (261)
T ss_pred HHHH-------------------------------------------------------------------HHHHHHHHh
Confidence 5322 256888999
Q ss_pred cCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCCCC
Q 019601 240 ASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDP 302 (338)
Q Consensus 240 ~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~~~ 302 (338)
.+|.+++.+|++++.....++.++++.|.+.+...+. ++|+++|+++|+ +| |+|.|++
T Consensus 203 ~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~~~i~af~-~k-r~~~~~~ 260 (261)
T PRK08138 203 MPPLALAQIKEVVLAGADAPLDAALALERKAFQLLFD---SEDQKEGMDAFL-EK-RKPAYKG 260 (261)
T ss_pred CCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHh-cC-CCCCCCC
Confidence 9999999999999988888999999999998888875 999999999999 88 8999975
No 26
>PRK05809 3-hydroxybutyryl-CoA dehydratase; Validated
Probab=100.00 E-value=7.5e-46 Score=343.25 Aligned_cols=226 Identities=23% Similarity=0.360 Sum_probs=203.4
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCC-CCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAG-RAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGI 79 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~ 79 (338)
|+.+|.++++.++.|+++++|||||.| ++||+|+|++++... .......+......++..+..+||||||+|||+
T Consensus 32 ~~~~l~~~~~~~~~d~~v~~vvl~g~g~~~F~aG~Dl~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~ 107 (260)
T PRK05809 32 TLKELDTVLDDIENDDNVYAVILTGAGEKAFVAGADISEMKDL----NEEEGRKFGLLGNKVFRKLENLDKPVIAAINGF 107 (260)
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEEcCCCCceeeCcChHhHhcc----ChHHHHHHHHHHHHHHHHHHcCCCCEEEEEcCe
Confidence 578999999999999999999999999 999999999987532 122223344455678889999999999999999
Q ss_pred cccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccCCC
Q 019601 80 TMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLNGR 158 (338)
Q Consensus 80 a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~ 158 (338)
|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. ++++++||+.++|+||+++|||++|||+++
T Consensus 108 a~GgG~~lal~cD~~va~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~ 187 (260)
T PRK05809 108 ALGGGCELSMACDIRIASEKAKFGQPEVGLGITPGFGGTQRLARIVGPGKAKELIYTGDMINAEEALRIGLVNKVVEPEK 187 (260)
T ss_pred eecHHHHHHHhCCEEEeeCCCEEeCcccccCCCCCccHHHHHHHHhCHHHHHHHHHhCCCCCHHHHHHcCCCCcccChHH
Confidence 9999999999999999999999999999999999999999999999999 999999999999999999999999999877
Q ss_pred hhHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHHH
Q 019601 159 LPLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLK 238 (338)
Q Consensus 159 l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~ 238 (338)
+.+. +.+++++++
T Consensus 188 l~~~-------------------------------------------------------------------a~~~a~~la 200 (260)
T PRK05809 188 LMEE-------------------------------------------------------------------AKALANKIA 200 (260)
T ss_pred HHHH-------------------------------------------------------------------HHHHHHHHH
Confidence 6532 236799999
Q ss_pred hcCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCCCC
Q 019601 239 EASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDP 302 (338)
Q Consensus 239 ~~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~~~ 302 (338)
..+|.+++.+|++++.....++.++++.|...+...+. ++|+++|+++|+ +| |+|.|++
T Consensus 201 ~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~egi~af~-~~-r~p~~~~ 259 (260)
T PRK05809 201 ANAPIAVKLCKDAINRGMQVDIDTAVAIEAEDFGECFS---TEDQTEGMTAFV-EK-REKNFKN 259 (260)
T ss_pred hCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHh-cC-CCCCCCC
Confidence 99999999999999998888999999999999988875 999999999999 88 8999975
No 27
>PRK07511 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.4e-45 Score=341.49 Aligned_cols=228 Identities=24% Similarity=0.326 Sum_probs=204.6
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGIT 80 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a 80 (338)
|+.+|.++++.++.|+++|+|||+|.|++||+|+|++++.... .........++..++.++..+..+||||||+|||+|
T Consensus 31 ~~~~l~~~l~~~~~d~~vr~vVl~g~g~~F~~G~Dl~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~kpvIAav~G~a 109 (260)
T PRK07511 31 MYAAGIEALNTAERDPSIRAVVLTGAGGFFCAGGNLNRLLENR-AKPPSVQAASIDGLHDWIRAIRAFPKPVIAAVEGAA 109 (260)
T ss_pred HHHHHHHHHHHhccCCCeEEEEEECCCCCcccCcCHHHHhhcc-cccchhHHHHHHHHHHHHHHHHcCCCCEEEEECCee
Confidence 5789999999999999999999999999999999999875421 111233345566778888999999999999999999
Q ss_pred ccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccCCCh
Q 019601 81 MGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLNGRL 159 (338)
Q Consensus 81 ~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l 159 (338)
+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. ++++++||+.++|+||+++|||++||+++++
T Consensus 110 ~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~~ 189 (260)
T PRK07511 110 AGAGFSLALACDLLVAARDAKFVMAYVKVGLTPDGGGSWFLARALPRQLATELLLEGKPISAERLHALGVVNRLAEPGQA 189 (260)
T ss_pred ehHHHHHHHhCCEEEeeCCCEEeccccccCcCCCchHHHHHHHHhCHHHHHHHHHhCCCCCHHHHHHcCCccEeeCchHH
Confidence 999999999999999999999999999999999999999999999999 9999999999999999999999999998776
Q ss_pred hHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHHHh
Q 019601 160 PLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKE 239 (338)
Q Consensus 160 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~ 239 (338)
.+ .+ .++++++++
T Consensus 190 ~~--~a-----------------------------------------------------------------~~~a~~l~~ 202 (260)
T PRK07511 190 LA--EA-----------------------------------------------------------------LALADQLAA 202 (260)
T ss_pred HH--HH-----------------------------------------------------------------HHHHHHHHh
Confidence 43 22 256889999
Q ss_pred cCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCCC
Q 019601 240 ASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWD 301 (338)
Q Consensus 240 ~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~~ 301 (338)
++|.++..+|+.++.....++.++++.|...+...+. ++|+++|+++|+ +| |+|.|+
T Consensus 203 ~~~~~~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~~~i~~f~-~~-r~~~~~ 259 (260)
T PRK07511 203 GSPNALARIKSLIADAPEATLAAQLEAERDHFVASLH---HADALEGIAAFL-EK-RAPDYK 259 (260)
T ss_pred CCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhc---CchHHHHHHHHh-cc-CCCCCC
Confidence 9999999999999998888999999999999988875 999999999999 88 899996
No 28
>PRK06563 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=7.9e-46 Score=342.18 Aligned_cols=226 Identities=21% Similarity=0.261 Sum_probs=197.2
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHH-HHHHHHHhhCCCCEEEEEccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETL-YQFVYLQGTFVKPHVAILDGI 79 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~kP~Iaav~G~ 79 (338)
|+.+|.++++.++.|+++++|||||.|++||+|+|++++...... ....+.... ..+...+..++|||||+|||+
T Consensus 27 ~~~~l~~~l~~~~~d~~vrvvvl~g~g~~F~aG~Dl~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~ 102 (255)
T PRK06563 27 MLDDLALALGEYEADDELRVAVLFAHGEHFTAGLDLADVAPKLAA----GGFPFPEGGIDPWGTVGRRLSKPLVVAVQGY 102 (255)
T ss_pred HHHHHHHHHHHHhhCCCcEEEEEECCCCCCcCCcCHHHHhhcccc----chhhhhhhhhHHHHHHHhcCCCCEEEEEcCe
Confidence 578999999999999999999999999999999999987542111 111111111 223335789999999999999
Q ss_pred cccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccCCC
Q 019601 80 TMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLNGR 158 (338)
Q Consensus 80 a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~ 158 (338)
|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. ++++++||+.++|+||+++||||+|||+++
T Consensus 103 a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~ 182 (255)
T PRK06563 103 CLTLGIELMLAADIVVAADNTRFAQLEVQRGILPFGGATLRFPQAAGWGNAMRYLLTGDEFDAQEALRLGLVQEVVPPGE 182 (255)
T ss_pred eecHHHHHHHhCCEEEecCCCEEeChhhhcCCCCCccHHHHHHHHhhHHHHHHHHHcCCCcCHHHHHHcCCCcEeeCHHH
Confidence 9999999999999999999999999999999999999999999999999 999999999999999999999999999887
Q ss_pred hhHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHHH
Q 019601 159 LPLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLK 238 (338)
Q Consensus 159 l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~ 238 (338)
+.+. + .+++++|+
T Consensus 183 l~~~--a-----------------------------------------------------------------~~~a~~la 195 (255)
T PRK06563 183 QLER--A-----------------------------------------------------------------IELAERIA 195 (255)
T ss_pred HHHH--H-----------------------------------------------------------------HHHHHHHH
Confidence 6532 2 25689999
Q ss_pred hcCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCCCC
Q 019601 239 EASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDP 302 (338)
Q Consensus 239 ~~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~~~ 302 (338)
+.+|.+++.+|++++.....++.++++.|...+...+. ++|++||+++|+ +| |+|.|++
T Consensus 196 ~~~~~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~~---~~d~~eg~~af~-~k-r~p~~~~ 254 (255)
T PRK06563 196 RAAPLGVQATLASARAAVREGEAAAAAQLPPELRPLFT---SEDAKEGVQAFL-ER-RPARFKG 254 (255)
T ss_pred hcCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhc---CchHHHHHHHHh-cC-CCCCCCC
Confidence 99999999999999988888999999999998888775 899999999999 88 8999975
No 29
>PRK05995 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.3e-45 Score=341.97 Aligned_cols=229 Identities=19% Similarity=0.290 Sum_probs=198.4
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGIT 80 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a 80 (338)
|+.+|.++++.++.|+++|+|||||.|++||+|+|++++....... ..........+..++..+..+||||||+|||+|
T Consensus 32 ~~~~l~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a 110 (262)
T PRK05995 32 VIAELTAAFRALDADDSVRAVVLAGAGKAFCAGADLNWMKKMAGYS-DDENRADARRLADMLRAIYRCPKPVIARVHGDA 110 (262)
T ss_pred HHHHHHHHHHHHhcCCCeEEEEEECCCCccccCcCHHHHhhhcccC-chhhhhHHHHHHHHHHHHHcCCCCEEEEECCEE
Confidence 5789999999999999999999999999999999999875321111 111122234567788899999999999999999
Q ss_pred ccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccCCCh
Q 019601 81 MGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLNGRL 159 (338)
Q Consensus 81 ~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l 159 (338)
+|||++|+++||+||++++++|++||+++|++|++|+++ +++++|.. ++++++||+.++|+||+++|||++|||++++
T Consensus 111 ~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~-l~~~vg~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l 189 (262)
T PRK05995 111 YAGGMGLVAACDIAVAADHAVFCLSEVRLGLIPATISPY-VIRAMGERAARRYFLTAERFDAAEALRLGLVHEVVPAEAL 189 (262)
T ss_pred EhhHHHHHHhCCEEEeeCCCEEeCcccccccCccchHHH-HHHHhCHHHHHHHHHcCCccCHHHHHHcCCCCeecCHHHH
Confidence 999999999999999999999999999999999887765 88999999 9999999999999999999999999998777
Q ss_pred hHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHHHh
Q 019601 160 PLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKE 239 (338)
Q Consensus 160 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~ 239 (338)
.+.. .+++++|++
T Consensus 190 ~~~a-------------------------------------------------------------------~~~a~~la~ 202 (262)
T PRK05995 190 DAKV-------------------------------------------------------------------DELLAALVA 202 (262)
T ss_pred HHHH-------------------------------------------------------------------HHHHHHHHh
Confidence 5422 256999999
Q ss_pred cCchHHHHHHHHHHhhccCCHHHH-HHHHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCCCCC
Q 019601 240 ASPLSLKVTLQSIREGRFQSLDQC-LVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDPP 303 (338)
Q Consensus 240 ~sp~al~~~k~~l~~~~~~~~~~~-l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~~~~ 303 (338)
.+|.+++.+|++++.....++.+. ++.|...+...+. ++|+++|+++|+ +| |+|.|+++
T Consensus 203 ~~~~a~~~~K~~l~~~~~~~~~~~~~~~e~~~~~~~~~---~~d~~e~~~af~-~k-r~p~~~~~ 262 (262)
T PRK05995 203 NSPQAVRAGKRLVRDVAGRPIDAALIADTASRIALIRA---TEEAREGVAAFL-EK-RKPAWRGR 262 (262)
T ss_pred CCHHHHHHHHHHHHhhhcCChhhHHHHHHHHHHHHHhc---CHHHHHHHHHHh-cC-CCCCCCCC
Confidence 999999999999998878888888 7888877777664 899999999999 88 89999864
No 30
>PRK08252 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.1e-45 Score=339.10 Aligned_cols=222 Identities=23% Similarity=0.310 Sum_probs=194.7
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGIT 80 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a 80 (338)
|+.+|.++++.++.|++|++|||||.|++||+|+|++++... . ... .....+..+. ...++|||||+|||+|
T Consensus 31 ~~~~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~--~-~~~---~~~~~~~~~~--~~~~~kPvIaav~G~a 102 (254)
T PRK08252 31 VAQGLAAALDELDADPDLSVGILTGAGGTFCAGMDLKAFARG--E-RPS---IPGRGFGGLT--ERPPRKPLIAAVEGYA 102 (254)
T ss_pred HHHHHHHHHHHHhhCCCceEEEEECCCCceEcCcCHHHHhcc--c-chh---hhHHHHHHHH--HhcCCCCEEEEECCEE
Confidence 678999999999999999999999999999999999987531 1 111 1111122222 2479999999999999
Q ss_pred ccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccCCCh
Q 019601 81 MGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLNGRL 159 (338)
Q Consensus 81 ~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l 159 (338)
+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. ++++++||+.++|+||+++|||++|||++++
T Consensus 103 ~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l 182 (254)
T PRK08252 103 LAGGFELALACDLIVAARDAKFGLPEVKRGLVAAGGGLLRLPRRIPYHIAMELALTGDMLTAERAHELGLVNRLTEPGQA 182 (254)
T ss_pred ehHHHHHHHhCCEEEEeCCCEEeCchhhcCCCCCchHHHHHHHHcCHHHHHHHHHcCCccCHHHHHHcCCcceecCcchH
Confidence 999999999999999999999999999999999999999999999999 9999999999999999999999999998877
Q ss_pred hHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHHHh
Q 019601 160 PLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKE 239 (338)
Q Consensus 160 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~ 239 (338)
.+. |.++++++++
T Consensus 183 ~~~-------------------------------------------------------------------a~~~a~~l~~ 195 (254)
T PRK08252 183 LDA-------------------------------------------------------------------ALELAERIAA 195 (254)
T ss_pred HHH-------------------------------------------------------------------HHHHHHHHHh
Confidence 532 2357999999
Q ss_pred cCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCCCC
Q 019601 240 ASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDP 302 (338)
Q Consensus 240 ~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~~~ 302 (338)
.+|.+++.+|++++.....++.++++.|...+...+. ++|+++|+++|+ +| |+|.|++
T Consensus 196 ~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---~~~~~eg~~af~-~k-r~p~~~~ 253 (254)
T PRK08252 196 NGPLAVAASKRIVVESGDWSEDEMFARQRELIAPVFT---SADAKEGATAFA-EK-RAPVWTG 253 (254)
T ss_pred CCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhc---CchHHHHHHHHh-cC-CCCCCCC
Confidence 9999999999999988888899999999988888775 999999999999 88 8999975
No 31
>PRK07659 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.1e-45 Score=340.23 Aligned_cols=226 Identities=23% Similarity=0.331 Sum_probs=202.2
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGIT 80 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a 80 (338)
|+.+|.++++++ .|+++++|||+|.|++||+|+|++++... ...+....++..+++++.++..+||||||+|||+|
T Consensus 34 ~~~~l~~~l~~~-~d~~vrvvvl~g~g~~F~aG~Dl~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~pvIaav~G~a 109 (260)
T PRK07659 34 MLKELLQALKEV-AESSAHIVVLRGNGRGFSAGGDIKMMLSS---NDESKFDGVMNTISEIVVTLYTMPKLTISAIHGPA 109 (260)
T ss_pred HHHHHHHHHHHh-cCCCeeEEEEECCCCCcccccCHHHHhhc---cCchhHHHHHHHHHHHHHHHHhCCCCEEEEecCce
Confidence 578999999999 58899999999999999999999987532 11223345566777888899999999999999999
Q ss_pred ccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccCCCh
Q 019601 81 MGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLNGRL 159 (338)
Q Consensus 81 ~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l 159 (338)
+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. ++++++||+.++|+||+++||||++| ++++
T Consensus 110 ~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~~~vg~~~a~~l~ltg~~~~a~eA~~~Glv~~vv-~~~~ 188 (260)
T PRK07659 110 AGLGLSIALTADYVIADISAKLAMNFIGIGLIPDGGGHFFLQKRVGENKAKQIIWEGKKLSATEALDLGLIDEVI-GGDF 188 (260)
T ss_pred ecHHHHHHHhCCEEEEcCCCEEcCchhhcCCCCCCchhhhHHHhcCHHHHHHHHHhCCccCHHHHHHcCChHHHh-hhHH
Confidence 999999999999999999999999999999999999999999999999 99999999999999999999999999 6666
Q ss_pred hHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHHHh
Q 019601 160 PLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKE 239 (338)
Q Consensus 160 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~ 239 (338)
.+.. .+++++|++
T Consensus 189 ~~~a-------------------------------------------------------------------~~~a~~l~~ 201 (260)
T PRK07659 189 QTAA-------------------------------------------------------------------KQKISEWLQ 201 (260)
T ss_pred HHHH-------------------------------------------------------------------HHHHHHHHh
Confidence 5322 256899999
Q ss_pred cCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCCCCC
Q 019601 240 ASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDPP 303 (338)
Q Consensus 240 ~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~~~~ 303 (338)
.+|.+++.+|++++.....++.+.++.|...+...+. ++|++||+++|+ +| |+|+|+++
T Consensus 202 ~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---~~~~~egi~af~-~k-r~p~~~~~ 260 (260)
T PRK07659 202 KPLKAMIETKQIYCELNRSQLEQVLQLEKRAQYAMRQ---TADHKEGIRAFL-EK-RLPVFKGE 260 (260)
T ss_pred CCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhc---CHhHHHHHHHHh-cC-CCCCCCCC
Confidence 9999999999999988888999999999998888875 999999999999 88 89999753
No 32
>PRK05981 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.5e-45 Score=340.89 Aligned_cols=230 Identities=21% Similarity=0.307 Sum_probs=201.7
Q ss_pred CHHHHHHHHHHHhcCC-CcEEEEEEeCCCCccccCChHHHHHHhccC--ChhhHHHHHHHHHHHHHHHhhCCCCEEEEEc
Q 019601 1 MVGRLKRLYESWEENP-DIGFVLMKGAGRAFCSGGDVIALYQLLNEG--KFEDFKNFFETLYQFVYLQGTFVKPHVAILD 77 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~-~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~ 77 (338)
|+.+|.++++.++.|+ ++++|||||.|++||+|+|++++....... ..+....+...++.++.++..+||||||+||
T Consensus 32 ~~~~l~~~l~~~~~d~~~v~vvvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kpvIaav~ 111 (266)
T PRK05981 32 MLGGLAEALDAIEDGKAEVRCLVLTGAGRGFCTGANLQGRGSGGRESDSGGDAGAALETAYHPFLRRLRNLPCPIVTAVN 111 (266)
T ss_pred HHHHHHHHHHHHhcCCCceEEEEEeCCCCCcccccCHHhhhcccccccccchhHHHHHHHHHHHHHHHHhCCCCEEEEEC
Confidence 6789999999999876 499999999999999999999875321100 0011223444567788899999999999999
Q ss_pred cccccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccC
Q 019601 78 GITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLN 156 (338)
Q Consensus 78 G~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~ 156 (338)
|+|+|||++|+++||+|||+++++|++||+++|++|++|+++++++++|.. ++++++||+.++|+||+++|||+++||+
T Consensus 112 G~a~GgG~~lalacD~~ia~~~a~f~~~e~~lG~~p~~g~~~~l~~~vg~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~ 191 (266)
T PRK05981 112 GPAAGVGMSFALMGDLILCARSAYFLQAFRRIGLVPDGGSTWLLPRLVGKARAMELSLLGEKLPAETALQWGLVNRVVDD 191 (266)
T ss_pred CEeehHHHHHHHhCCEEEecCCCEEechHhhcCCCCCccHHHHHHHHhHHHHHHHHHHhCCCcCHHHHHHcCCceEeeCH
Confidence 999999999999999999999999999999999999999999999999999 9999999999999999999999999998
Q ss_pred CChhHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHH
Q 019601 157 GRLPLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEK 236 (338)
Q Consensus 157 ~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~ 236 (338)
+++.+.. .+++++
T Consensus 192 ~~~~~~a-------------------------------------------------------------------~~~a~~ 204 (266)
T PRK05981 192 AELMAEA-------------------------------------------------------------------MKLAHE 204 (266)
T ss_pred hHHHHHH-------------------------------------------------------------------HHHHHH
Confidence 8775322 256899
Q ss_pred HHhcCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCCCC
Q 019601 237 LKEASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDP 302 (338)
Q Consensus 237 i~~~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~~~ 302 (338)
++..+|.++..+|++++...+.++.+.++.|...+...+. ++|++||+++|+ +| |+|.|+.
T Consensus 205 l~~~~~~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~~---s~d~~e~~~af~-~k-r~~~~~~ 265 (266)
T PRK05981 205 LANGPTVALGLIRKLYWDSPENDFEEQLNLEREAQRIAGK---TEDFKEGVGAFL-QK-RPAQFKG 265 (266)
T ss_pred HHcCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHhc---ChhHHHHHHHHh-cC-CCCCCCC
Confidence 9999999999999999988888999999999998887765 999999999999 88 8999974
No 33
>PRK07468 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=3.5e-45 Score=339.14 Aligned_cols=228 Identities=18% Similarity=0.263 Sum_probs=197.5
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGIT 80 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a 80 (338)
|+.+|.++++.++.|+++++|||||.|++||+|+|++++...... ...........+..++..+..++|||||+|||+|
T Consensus 33 ~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a 111 (262)
T PRK07468 33 MIAELTTAARRLAADAAVRVVVLTGAGKSFCAGGDLGWMRAQMTA-DRATRIEEARRLAMMLKALNDLPKPLIGRIQGQA 111 (262)
T ss_pred HHHHHHHHHHHHhcCCCeEEEEEECCCCcccCCcCHHHHHhhccc-chhhHHHHHHHHHHHHHHHHcCCCCEEEEECCEE
Confidence 578999999999999999999999999999999999987532111 1111122344566788899999999999999999
Q ss_pred ccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccCCCh
Q 019601 81 MGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLNGRL 159 (338)
Q Consensus 81 ~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l 159 (338)
+|||++|+++||+||++++++|++||+++|++|++|+++++ +++|.. +++|++||+.++|+||+++|||+++||.+++
T Consensus 112 ~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~~-~~vG~~~a~~lll~g~~~~a~eA~~~Glv~~v~~~~~l 190 (262)
T PRK07468 112 FGGGVGLISVCDVAIAVSGARFGLTETRLGLIPATISPYVV-ARMGEANARRVFMSARLFDAEEAVRLGLLSRVVPAERL 190 (262)
T ss_pred EhHHHHHHHhCCEEEEeCCCEEeCchhccCCCcccchhhHH-hhccHHHHHHHHHhCCccCHHHHHHcCCcceecCHHHH
Confidence 99999999999999999999999999999999999998855 559999 9999999999999999999999999998776
Q ss_pred hHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHHHh
Q 019601 160 PLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKE 239 (338)
Q Consensus 160 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~ 239 (338)
.+.. .++++++++
T Consensus 191 ~~~~-------------------------------------------------------------------~~~a~~l~~ 203 (262)
T PRK07468 191 DAAV-------------------------------------------------------------------EAEVTPYLS 203 (262)
T ss_pred HHHH-------------------------------------------------------------------HHHHHHHHh
Confidence 5322 256899999
Q ss_pred cCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCCCC
Q 019601 240 ASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDP 302 (338)
Q Consensus 240 ~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~~~ 302 (338)
.+|.+++.+|++++......+...++.|...+...+. ++|++||+++|+ +| |+|.|+.
T Consensus 204 ~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---s~d~~e~~~af~-~k-r~~~~~~ 261 (262)
T PRK07468 204 CAPGAVAAAKALVRALGAPIDEAVIDATIEALADTWE---TEEAREGIAAFF-DK-RAPAWRG 261 (262)
T ss_pred cCHHHHHHHHHHHHhhhccChHHHHHHHHHHHHHHhc---CHHHHHHHHHHH-cC-CCCCCCC
Confidence 9999999999999887666789999999988888775 999999999999 98 8999963
No 34
>PRK06494 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4.6e-45 Score=337.79 Aligned_cols=223 Identities=22% Similarity=0.340 Sum_probs=192.9
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCC-CCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAG-RAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGI 79 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~ 79 (338)
|+.+|.++++.++.|+++++|||||.| ++||+|+|++++..... .... ...+..+ ..+..++|||||+|||+
T Consensus 32 ~~~~l~~~l~~~~~d~~v~~vVl~g~g~~~F~aG~Dl~~~~~~~~---~~~~---~~~~~~~-~~~~~~~kPvIaav~G~ 104 (259)
T PRK06494 32 AHFELEEVFDDFAADPEQWVAIVTGAGDKAFSAGNDLKEQAAGGK---RGWP---ESGFGGL-TSRFDLDKPIIAAVNGV 104 (259)
T ss_pred HHHHHHHHHHHHhhCCCcEEEEEEcCCCCceeccccHHhHhhcCc---chhh---hHHHHHH-HHHhcCCCCEEEEECCE
Confidence 578999999999999999999999998 79999999998753211 1110 1112222 33468999999999999
Q ss_pred cccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccCCC
Q 019601 80 TMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLNGR 158 (338)
Q Consensus 80 a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~ 158 (338)
|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. ++++++||+.++|+||+++||||++||+++
T Consensus 105 a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~lll~g~~~~a~eA~~~GLv~~vv~~~~ 184 (259)
T PRK06494 105 AMGGGFELALACDLIVAAENATFALPEPRVGLAALAGGLHRLPRQIGLKRAMGMILTGRRVTAREGLELGFVNEVVPAGE 184 (259)
T ss_pred EecHHHHHHHhCCEEEEeCCCEEeCcccccCCCCCchHHHHHHHHcCHHHHHHHHHcCCcCCHHHHHHcCCCcEecCHhH
Confidence 9999999999999999999999999999999999999999999999999 999999999999999999999999999887
Q ss_pred hhHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHHH
Q 019601 159 LPLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLK 238 (338)
Q Consensus 159 l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~ 238 (338)
+.+.. .+++++|+
T Consensus 185 l~~~a-------------------------------------------------------------------~~~a~~la 197 (259)
T PRK06494 185 LLAAA-------------------------------------------------------------------ERWADDIL 197 (259)
T ss_pred HHHHH-------------------------------------------------------------------HHHHHHHH
Confidence 75422 25699999
Q ss_pred hcCchHHHHHHHHHHhhccCCHHHHHHHH--HHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCCCC
Q 019601 239 EASPLSLKVTLQSIREGRFQSLDQCLVRE--YRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDP 302 (338)
Q Consensus 239 ~~sp~al~~~k~~l~~~~~~~~~~~l~~e--~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~~~ 302 (338)
+.||.++..+|++++.....++.++++.| ...+..++. ++|++||+++|+ +| |+|.|++
T Consensus 198 ~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~---~~d~~eg~~af~-~k-r~p~~~~ 258 (259)
T PRK06494 198 ACSPLSIRASKQAVYRGLEVSLEEAITAQRDYPAVEARRA---SQDYIEGPKAFA-EK-RPPRWKG 258 (259)
T ss_pred hcCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhc---CccHHHHHHHHH-cc-CCCCCCC
Confidence 99999999999999988888999999998 445566654 999999999999 88 8999975
No 35
>PRK06688 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=3.1e-45 Score=338.97 Aligned_cols=225 Identities=26% Similarity=0.387 Sum_probs=203.6
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGIT 80 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a 80 (338)
|+.+|.++++.++.|+++++|||+|.|++||+|+|++++.... . .. ..+...+++++..+..+||||||+|||+|
T Consensus 33 ~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~--~--~~-~~~~~~~~~~~~~l~~~~kp~Iaav~G~a 107 (259)
T PRK06688 33 MYQALADALEAAATDPAVRVVVLTGAGRAFSAGGDIKDFPKAP--P--KP-PDELAPVNRFLRAIAALPKPVVAAVNGPA 107 (259)
T ss_pred HHHHHHHHHHHHhcCCCceEEEEECCCCCccCccCHHHHhccC--c--ch-HHHHHHHHHHHHHHHcCCCCEEEEECCee
Confidence 5789999999999999999999999999999999999875421 1 11 34556677888899999999999999999
Q ss_pred ccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccCCCh
Q 019601 81 MGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLNGRL 159 (338)
Q Consensus 81 ~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l 159 (338)
+|||++|+++||+|||+++++|++||+++|++|++|+++++++++|.. +++++++|+.++|+||+++|||++++|++++
T Consensus 108 ~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~~G~~~a~~l~l~g~~~~a~eA~~~Glv~~v~~~~~l 187 (259)
T PRK06688 108 VGVGVSLALACDLVYASESAKFSLPFAKLGLCPDAGGSALLPRLIGRARAAEMLLLGEPLSAEEALRIGLVNRVVPAAEL 187 (259)
T ss_pred ecHHHHHHHhCCEEEecCCCEecCchhhcCCCCCcchhhHHHHHhhHHHHHHHHHhCCccCHHHHHHcCCcceecCHHHH
Confidence 999999999999999999999999999999999999999999999999 9999999999999999999999999998776
Q ss_pred hHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHHHh
Q 019601 160 PLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKE 239 (338)
Q Consensus 160 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~ 239 (338)
.+.. .+++++|++
T Consensus 188 ~~~a-------------------------------------------------------------------~~~a~~i~~ 200 (259)
T PRK06688 188 DAEA-------------------------------------------------------------------DAQAAKLAA 200 (259)
T ss_pred HHHH-------------------------------------------------------------------HHHHHHHHh
Confidence 5322 256889999
Q ss_pred cCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCCCC
Q 019601 240 ASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDP 302 (338)
Q Consensus 240 ~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~~~ 302 (338)
.+|.++..+|++++.....+++++++.|...+..++. ++++++|+++|+ +| |+|.|++
T Consensus 201 ~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~~~~~af~-~~-~~p~~~~ 258 (259)
T PRK06688 201 GPASALRYTKRAINAATLTELEEALAREAAGFGRLLR---TPDFREGATAFI-EK-RKPDFTG 258 (259)
T ss_pred CCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHH-cC-CCCCCCC
Confidence 9999999999999998888999999999999888875 899999999999 88 8999974
No 36
>PRK03580 carnitinyl-CoA dehydratase; Provisional
Probab=100.00 E-value=6.2e-45 Score=337.30 Aligned_cols=225 Identities=20% Similarity=0.320 Sum_probs=196.1
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCC-CCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAG-RAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGI 79 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~ 79 (338)
|+.+|.++++.++.|++|++|||||.| ++||+|+|++++.... .. . ..+.......+.++..+||||||+|||+
T Consensus 30 ~~~~l~~~l~~~~~d~~vr~vvl~g~g~~~F~aG~Dl~~~~~~~--~~-~--~~~~~~~~~~~~~l~~~~kPvIaav~G~ 104 (261)
T PRK03580 30 TSFAMGEVFLNFRDDPELRVAIITGAGEKFFSAGWDLKAAAEGE--AP-D--ADFGPGGFAGLTEIFDLDKPVIAAVNGY 104 (261)
T ss_pred HHHHHHHHHHHHHhCCCcEEEEEEeCCCCceecccCHHHHhccC--cc-h--hhhhhhhhHHHHHHHhCCCCEEEEECCe
Confidence 578999999999999999999999999 7999999999875321 10 1 1122223345678899999999999999
Q ss_pred cccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccCCC
Q 019601 80 TMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLNGR 158 (338)
Q Consensus 80 a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~ 158 (338)
|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +++++++|+.++|+||+++|||+++||+++
T Consensus 105 a~GgG~~lalacD~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~vg~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~ 184 (261)
T PRK03580 105 AFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKRLPPAIANEMVMTGRRMDAEEALRWGIVNRVVPQAE 184 (261)
T ss_pred eehHHHHHHHHCCEEEecCCCEEeCcccccCcCCCccHHHHHHHHhCHHHHHHHHHhCCccCHHHHHHcCCCcEecCHhH
Confidence 9999999999999999999999999999999999999999999999999 999999999999999999999999999887
Q ss_pred hhHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHHH
Q 019601 159 LPLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLK 238 (338)
Q Consensus 159 l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~ 238 (338)
+.+.. .+++++|+
T Consensus 185 l~~~a-------------------------------------------------------------------~~~a~~la 197 (261)
T PRK03580 185 LMDRA-------------------------------------------------------------------RELAQQLV 197 (261)
T ss_pred HHHHH-------------------------------------------------------------------HHHHHHHH
Confidence 75422 25689999
Q ss_pred hcCchHHHHHHHHHHhhccCCHHHHHHHHHH----HHHHhcccCCCCcHHhhHhhhhcCCCCCCCCCC
Q 019601 239 EASPLSLKVTLQSIREGRFQSLDQCLVREYR----ITLNGISKKVSNDFCEGIRARLVDKDFAPKWDP 302 (338)
Q Consensus 239 ~~sp~al~~~k~~l~~~~~~~~~~~l~~e~~----~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~~~ 302 (338)
+.+|.+++.+|++++.....+++++++.|.. .+..++. ++|+++|+++|+ +| |+|.|+.
T Consensus 198 ~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~---~~d~~e~~~af~-ek-r~~~~~~ 260 (261)
T PRK03580 198 NSAPLAIAALKEIYRETSEMPVEEAYRYIRSGVLKHYPSVLH---SEDALEGPRAFA-EK-RDPVWKG 260 (261)
T ss_pred hCCHHHHHHHHHHHHHHhcCCHHHHHHHHHhhhHHHHHHHhc---CccHHHHHHHHh-cC-CCCCCCC
Confidence 9999999999999998888899999998864 4555554 999999999999 98 8999975
No 37
>PRK05674 gamma-carboxygeranoyl-CoA hydratase; Validated
Probab=100.00 E-value=4.2e-45 Score=339.05 Aligned_cols=228 Identities=22% Similarity=0.300 Sum_probs=194.1
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGIT 80 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a 80 (338)
|+.+|.++++.++.|+++++|||||.|++||+|+|++++.... .............+..++..+..+||||||+|||+|
T Consensus 34 ~~~el~~al~~~~~d~~vr~vVl~g~g~~F~aG~Dl~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaaV~G~a 112 (265)
T PRK05674 34 MIRELILALDQVQSDASLRFLLLRGRGRHFSAGADLAWMQQSA-DLDYNTNLDDARELAELMYNLYRLKIPTLAVVQGAA 112 (265)
T ss_pred HHHHHHHHHHHHhcCCCeeEEEEECCCCCcccCcCHHHHhhcc-cccchhhhHHHHHHHHHHHHHHcCCCCEEEEEcCEE
Confidence 6789999999999999999999999999999999999875321 101111112233456788889999999999999999
Q ss_pred ccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccCCCh
Q 019601 81 MGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLNGRL 159 (338)
Q Consensus 81 ~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l 159 (338)
+|||++|+++||+|||+++++|++||+++|++|++|+++ +++++|.. ++++++||+.++|+||+++|||++|||++++
T Consensus 113 ~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gi~p~~~~~~-l~~~vG~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l 191 (265)
T PRK05674 113 FGGALGLISCCDMAIGADDAQFCLSEVRIGLAPAVISPF-VVKAIGERAARRYALTAERFDGRRARELGLLAESYPAAEL 191 (265)
T ss_pred EechhhHhhhcCEEEEeCCCEEeCcccccCCCcchhHHH-HHHHhCHHHHHHHHHhCcccCHHHHHHCCCcceecCHHHH
Confidence 999999999999999999999999999999999887665 88999999 9999999999999999999999999998777
Q ss_pred hHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHHHh
Q 019601 160 PLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKE 239 (338)
Q Consensus 160 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~ 239 (338)
.+.. .+++++|++
T Consensus 192 ~~~a-------------------------------------------------------------------~~~a~~la~ 204 (265)
T PRK05674 192 EAQV-------------------------------------------------------------------EAWIANLLL 204 (265)
T ss_pred HHHH-------------------------------------------------------------------HHHHHHHHh
Confidence 5422 256999999
Q ss_pred cCchHHHHHHHHHHhhccCCHHHHHHHH-HHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCCCC
Q 019601 240 ASPLSLKVTLQSIREGRFQSLDQCLVRE-YRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDP 302 (338)
Q Consensus 240 ~sp~al~~~k~~l~~~~~~~~~~~l~~e-~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~~~ 302 (338)
++|.+++.+|++++.....++.++++.+ ...+...+. ++|++||+++|+ +| |+|.|+.
T Consensus 205 ~~p~a~~~~K~~l~~~~~~~~~~~~~~~~~~~~~~~~~---s~d~~e~~~af~-~k-r~p~~~~ 263 (265)
T PRK05674 205 NSPQALRASKDLLREVGDGELSPALRRYCENAIARIRV---SAEGQEGLRAFL-EK-RTPAWQT 263 (265)
T ss_pred cCHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHhc---CHHHHHHHHHHH-cc-CCCCCCC
Confidence 9999999999999998888888887653 345555543 899999999999 88 8999974
No 38
>PRK06495 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=6.7e-45 Score=336.32 Aligned_cols=225 Identities=22% Similarity=0.318 Sum_probs=198.9
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGIT 80 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a 80 (338)
|+.+|.++++.++.|+++++|||+|.|++||+|+|++++.... ........+...++.++.++..+||||||+|||+|
T Consensus 31 ~~~~l~~al~~~~~d~~vr~vVl~g~g~~FcaG~Dl~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a 108 (257)
T PRK06495 31 LRDELIAVFDEISERPDVRVVVLTGAGKVFCAGADLKGRPDVI--KGPGDLRAHNRRTRECFHAIRECAKPVIAAVNGPA 108 (257)
T ss_pred HHHHHHHHHHHHhhCCCceEEEEECCCCCcccCcCHHhHhhcc--CCchhHHHHHHHHHHHHHHHHhCCCCEEEEECCee
Confidence 5789999999999999999999999999999999999875321 11122233445567788899999999999999999
Q ss_pred ccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccCCCh
Q 019601 81 MGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLNGRL 159 (338)
Q Consensus 81 ~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l 159 (338)
+|||++|+++||+|||+++++|++||+++|+. |+++++++++|.. +++++++|+.++|+||+++|||+++||++++
T Consensus 109 ~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~---~~~~~l~~~~g~~~a~~lll~g~~~~a~eA~~~GLv~~vv~~~~~ 185 (257)
T PRK06495 109 LGAGLGLVASCDIIVASENAVFGLPEIDVGLA---GGGKHAMRLFGHSLTRRMMLTGYRVPAAELYRRGVIEACLPPEEL 185 (257)
T ss_pred ehhHHHHHHhCCEEEecCCCEeeChhhccCcc---ccHHHHHHHhCHHHHHHHHHcCCeeCHHHHHHcCCcceecCHHHH
Confidence 99999999999999999999999999999996 4567799999999 9999999999999999999999999998877
Q ss_pred hHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHHHh
Q 019601 160 PLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKE 239 (338)
Q Consensus 160 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~ 239 (338)
.+.. .+++++|++
T Consensus 186 ~~~a-------------------------------------------------------------------~~~a~~l~~ 198 (257)
T PRK06495 186 MPEA-------------------------------------------------------------------MEIAREIAS 198 (257)
T ss_pred HHHH-------------------------------------------------------------------HHHHHHHHh
Confidence 5422 256999999
Q ss_pred cCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCCCC
Q 019601 240 ASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDP 302 (338)
Q Consensus 240 ~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~~~ 302 (338)
.+|.+++.+|++++.....++.++++.|...+...+. ++|++||+++|+ +| |+|.|+.
T Consensus 199 ~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---s~d~~egi~af~-~k-r~p~~~~ 256 (257)
T PRK06495 199 KSPLATRLAKDALNTIENMSLRDGYRYEQDITAKLAK---TEDAKEAQRAFL-EK-RPPVFKG 256 (257)
T ss_pred CCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc---ChHHHHHHHHHh-cc-CCCCCCC
Confidence 9999999999999988888999999999998888765 999999999999 88 8999975
No 39
>PRK07327 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=6.5e-45 Score=338.36 Aligned_cols=224 Identities=23% Similarity=0.343 Sum_probs=191.7
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGIT 80 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a 80 (338)
|+.+|.+++++++.|+++++|||||.|++||+|+|++++.... ........++..+..++..+..+||||||+|||+|
T Consensus 40 ~~~~l~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a 117 (268)
T PRK07327 40 MHRELADIWRDVDRDPDVRVVLIRGEGKAFSAGGDLALVEEMA--DDFEVRARVWREARDLVYNVINCDKPIVSAIHGPA 117 (268)
T ss_pred HHHHHHHHHHHhhhCCCceEEEEECCCCCcccccCHHHHhhcc--CcHHHHHHHHHHHHHHHHHHHcCCCCEEEEEcCee
Confidence 5789999999999999999999999999999999999875421 11222334455567788899999999999999999
Q ss_pred ccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccCCCh
Q 019601 81 MGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLNGRL 159 (338)
Q Consensus 81 ~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l 159 (338)
+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. ++++++||+.++|+||+++|||+++||++++
T Consensus 118 ~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l 197 (268)
T PRK07327 118 VGAGLVAALLADISIAAKDARIIDGHTRLGVAAGDHAAIVWPLLCGMAKAKYYLLLCEPVSGEEAERIGLVSLAVDDDEL 197 (268)
T ss_pred eehhhHHHHhCCEEEecCCCEEeCcccccCCCCCcchhhHHHHHhCHHHHHHHHHcCCccCHHHHHHcCCcceecCHHHH
Confidence 999999999999999999999999999999999999999999999999 9999999999999999999999999998877
Q ss_pred hHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHHHh
Q 019601 160 PLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKE 239 (338)
Q Consensus 160 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~ 239 (338)
.+.. .+++++|++
T Consensus 198 ~~~a-------------------------------------------------------------------~~~a~~la~ 210 (268)
T PRK07327 198 LPKA-------------------------------------------------------------------LEVAERLAA 210 (268)
T ss_pred HHHH-------------------------------------------------------------------HHHHHHHHc
Confidence 5422 256999999
Q ss_pred cCchHHHHHHHHHHhhcc---CCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCCCC
Q 019601 240 ASPLSLKVTLQSIREGRF---QSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDP 302 (338)
Q Consensus 240 ~sp~al~~~k~~l~~~~~---~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~~~ 302 (338)
.+|.+++.+|++++.... ..++..+..+. ..+ .++|+++|+++|+ +| |+|.|++
T Consensus 211 ~~~~a~~~~K~~l~~~~~~~~~~~~~~~~~~~----~~~---~~~d~~eg~~af~-ek-r~p~~~~ 267 (268)
T PRK07327 211 GSQTAIRWTKYALNNWLRMAGPTFDTSLALEF----MGF---SGPDVREGLASLR-EK-RAPDFPG 267 (268)
T ss_pred CCHHHHHHHHHHHHHhhhhhhhhHHHHHHHHH----HHc---cChhHHHHHHHHH-hc-CCCCCCC
Confidence 999999999999986532 23455444432 233 3899999999999 88 8999975
No 40
>TIGR03189 dienoyl_CoA_hyt cyclohexa-1,5-dienecarbonyl-CoA hydratase. This enzyme, cyclohexa-1,5-dienecarbonyl-CoA hydratase, also called dienoyl-CoA hydratase, acts on the product of benzoyl-CoA reductase (EC 1.3.99.15). Benzoyl-CoA is a common intermediate in the degradation of many aromatic compounds, and this enzyme is part of an anaerobic pathway for dearomatization and degradation.
Probab=100.00 E-value=8.7e-45 Score=334.31 Aligned_cols=220 Identities=21% Similarity=0.283 Sum_probs=190.9
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGIT 80 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a 80 (338)
|+.+|.++++.++.|+++++|||||.|++||+|+|++++.. .....++..+..++.++..+||||||+|||+|
T Consensus 28 ~~~~l~~~l~~~~~~~~vr~vVl~g~g~~FcaG~Dl~~~~~-------~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a 100 (251)
T TIGR03189 28 MIAALSAALGEHLEDSALRAVLLDAEGPHFSFGASVAEHMP-------DQCAAMLASLHKLVIAMLDSPVPILVAVRGQC 100 (251)
T ss_pred HHHHHHHHHHHHHcCCCceEEEEECCCCceecCcChhhhCc-------hhHHHHHHHHHHHHHHHHhCCCCEEEEecCee
Confidence 57899999999999999999999999999999999997521 11123345566788899999999999999999
Q ss_pred ccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccCCCh
Q 019601 81 MGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLNGRL 159 (338)
Q Consensus 81 ~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l 159 (338)
+|||++|+++||+||++++++|++||+++|++|++ ++++|++++|.. ++++++||+.++|+||+++|||++|||+.+
T Consensus 101 ~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~-~~~~l~~~vg~~~a~~l~ltg~~~~a~eA~~~Glv~~v~~~~~- 178 (251)
T TIGR03189 101 LGGGLEVAAAGNLMFAAPDAKLGQPEIVLGVFAPA-ASCLLPERMGRVAAEDLLYSGRSIDGAEGARIGLANAVAEDPE- 178 (251)
T ss_pred eeHHHHHHHhCCEEEEcCCCEEeCchhhcCCCCCc-hHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHCCCcceecCcHH-
Confidence 99999999999999999999999999999999874 577899999999 999999999999999999999999997533
Q ss_pred hHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHH-HHHHHH
Q 019601 160 PLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRK-AVEKLK 238 (338)
Q Consensus 160 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~-~a~~i~ 238 (338)
. .++ + ++++|+
T Consensus 179 ~---~a~-----------------------------------------------------------------~~~a~~la 190 (251)
T TIGR03189 179 N---AAL-----------------------------------------------------------------AWFDEHPA 190 (251)
T ss_pred H---HHH-----------------------------------------------------------------HHHHHHHH
Confidence 1 111 2 368899
Q ss_pred hcCchHHHHHHHHHHhhccCCHHHHHH-HHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCCCC
Q 019601 239 EASPLSLKVTLQSIREGRFQSLDQCLV-REYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDP 302 (338)
Q Consensus 239 ~~sp~al~~~k~~l~~~~~~~~~~~l~-~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~~~ 302 (338)
+.||.+++.+|++++.....++++++. .|...+...+. ++|++||+++|+ +| |+|.|++
T Consensus 191 ~~~p~a~~~~K~~l~~~~~~~~~~~~~~~e~~~~~~~~~---s~d~~eg~~af~-ek-r~p~~~~ 250 (251)
T TIGR03189 191 KLSASSLRFAVRAARLGMNERVKAKIAEVEALYLEELMA---THDAVEGLNAFL-EK-RPALWED 250 (251)
T ss_pred hCCHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHhC---CHhHHHHHHHHH-hc-CCCCCCC
Confidence 999999999999999887778887764 67676666664 999999999999 98 8999975
No 41
>PRK09120 p-hydroxycinnamoyl CoA hydratase/lyase; Validated
Probab=100.00 E-value=1.2e-44 Score=337.70 Aligned_cols=223 Identities=21% Similarity=0.295 Sum_probs=192.2
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGIT 80 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a 80 (338)
|+.+|.++++.++.|+++++|||||.|++||+|+|++++................+.++.++..+..+||||||+|||+|
T Consensus 36 m~~el~~al~~~~~d~~vr~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a 115 (275)
T PRK09120 36 LNREMIDVLDALEFDDDAGVLVLTGAGDAWSAGMDLKEYFRETDAQPEILQERIRREAYGWWRRLRWYQKPTIAMVNGWC 115 (275)
T ss_pred HHHHHHHHHHHHHhCCCceEEEEEcCCCceecCcCHHHHhhccccchhHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCEE
Confidence 57899999999999999999999999999999999998743211111111223334456778889999999999999999
Q ss_pred ccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccCCCh
Q 019601 81 MGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLNGRL 159 (338)
Q Consensus 81 ~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l 159 (338)
+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. ++++++||+.++|+||+++|||++|||++++
T Consensus 116 ~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~~a~~llltg~~~~A~eA~~~Glv~~vv~~~~l 195 (275)
T PRK09120 116 FGGGFSPLVACDLAIAADEAQFGLSEINWGIPPGGGVSKAMADTVGHRDALYYIMTGETFTGRKAAEMGLVNESVPLAQL 195 (275)
T ss_pred echhHHHHHhCCEEEEeCCcEecCCccccCCCCCcchHHHHHHHcCHHHHHHHHhcCCccCHHHHHHcCCcceecCHHHH
Confidence 999999999999999999999999999999999999999999999999 9999999999999999999999999999887
Q ss_pred hHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHHHh
Q 019601 160 PLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKE 239 (338)
Q Consensus 160 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~ 239 (338)
.+.. .+++++|++
T Consensus 196 ~~~a-------------------------------------------------------------------~~~a~~la~ 208 (275)
T PRK09120 196 RART-------------------------------------------------------------------RELAAKLLE 208 (275)
T ss_pred HHHH-------------------------------------------------------------------HHHHHHHHh
Confidence 6422 256999999
Q ss_pred cCchHHHHHHHHHHhhccCCHHHHHHHHHHHH--HHhcccCCCC-cHHhhHhhhhcCC
Q 019601 240 ASPLSLKVTLQSIREGRFQSLDQCLVREYRIT--LNGISKKVSN-DFCEGIRARLVDK 294 (338)
Q Consensus 240 ~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~--~~~~~~~~~~-d~~egi~~fl~~k 294 (338)
.+|.+++.+|++++.....++.+.++.|.... ...+. ++ |++||+++|+ +|
T Consensus 209 ~~p~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~---~~~d~~eg~~afl-~k 262 (275)
T PRK09120 209 KNPVVLRAAKDGFKRVRELTWDQAEDYLYAKLEQANSLD---PEGGREEGLKQFL-DD 262 (275)
T ss_pred CCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhC---CHHHHHHHHHHHH-hc
Confidence 99999999999999988889999988876543 33343 77 8999999999 66
No 42
>PRK06210 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=6.5e-45 Score=339.09 Aligned_cols=230 Identities=24% Similarity=0.348 Sum_probs=198.8
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChh--hHHHH----HHHHHHHHHHHhhCCCCEEE
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFE--DFKNF----FETLYQFVYLQGTFVKPHVA 74 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~i~~~~kP~Ia 74 (338)
|+.+|.++++.++.|+++++|||+|.|++||+|+|++++.......... ....+ ...+++++..+..++|||||
T Consensus 34 ~~~~L~~~l~~~~~d~~vr~vVl~g~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIa 113 (272)
T PRK06210 34 MEAEVYAAMDRAEADPAVRVIVLTGAGRGFCAGADMGELQTIDPSDGRRDTDVRPFVGNRRPDYQTRYHFLTALRKPVIA 113 (272)
T ss_pred HHHHHHHHHHHhccCCCeeEEEEECCCCCcccccCHHHHhccCcccccccccchhhhhhhhhhHHHHHHHHHhCCCCEEE
Confidence 5789999999999999999999999999999999999875421100000 00111 11234567789999999999
Q ss_pred EEccccccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCcccee
Q 019601 75 ILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHY 153 (338)
Q Consensus 75 av~G~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~v 153 (338)
+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. ++++++||+.++|+||+++||||++
T Consensus 114 av~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~ig~~~a~~l~ltg~~~~a~eA~~~Glv~~v 193 (272)
T PRK06210 114 AINGACAGIGLTHALMCDVRFAADGAKFTTAFARRGLIAEHGISWILPRLVGHANALDLLLSARTFYAEEALRLGLVNRV 193 (272)
T ss_pred EECCeeehHHHHHHHhCCEEEEeCCCEEechHHhcCCCCCCchhhhhHhhhCHHHHHHHHHcCCccCHHHHHHcCCccee
Confidence 999999999999999999999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred ccCCChhHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHH
Q 019601 154 TLNGRLPLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKA 233 (338)
Q Consensus 154 v~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~ 233 (338)
||++++.+.. .++
T Consensus 194 v~~~~l~~~a-------------------------------------------------------------------~~~ 206 (272)
T PRK06210 194 VPPDELMERT-------------------------------------------------------------------LAY 206 (272)
T ss_pred cCHHHHHHHH-------------------------------------------------------------------HHH
Confidence 9987765322 256
Q ss_pred HHHHHhc-CchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCCCC
Q 019601 234 VEKLKEA-SPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDP 302 (338)
Q Consensus 234 a~~i~~~-sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~~~ 302 (338)
+++|++. +|.++..+|+.++.....++.+.++.|...+...+. ++|++||+++|+ +| |+|.|..
T Consensus 207 a~~i~~~~~p~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---~~~~~egi~af~-~k-r~p~~~~ 271 (272)
T PRK06210 207 AEDLARNVSPASMAVIKRQLYEDAFQTLAEATARANREMHESLQ---RPDFIEGVASFL-EK-RPPRFPG 271 (272)
T ss_pred HHHHHhcCCHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHhc---CccHHHHHHHHh-cc-CCCCCCC
Confidence 8899985 999999999999998888999999999998888765 999999999999 88 8999974
No 43
>PRK06143 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.1e-44 Score=334.65 Aligned_cols=218 Identities=21% Similarity=0.332 Sum_probs=195.8
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCC-CCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAG-RAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGI 79 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~ 79 (338)
|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++... .......+...++.++..+..+||||||+|||+
T Consensus 35 ~~~~l~~~l~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~ 110 (256)
T PRK06143 35 VILALTQALRWLAADPDVRVLVLRGAGEKAFIGGADIKEMATL----DQASAEAFISRLRDLCDAVRHFPVPVIARIPGW 110 (256)
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEEeCCCCcccCCcCHHHHhhc----ChhhHHHHHHHHHHHHHHHHhCCCCEEEEECCE
Confidence 578999999999999999999999999 799999999987532 122234455667788889999999999999999
Q ss_pred cccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccCCC
Q 019601 80 TMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLNGR 158 (338)
Q Consensus 80 a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~ 158 (338)
|+|||++|+++||+||++++++|++||+++|+ |++|++++|++++|.. +++++++|+.++|+||+++||||++||+++
T Consensus 111 a~GgG~~lalacD~~ia~~~a~f~~pe~~~G~-p~~~~~~~l~~~iG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~ 189 (256)
T PRK06143 111 CLGGGLELAAACDLRIAAHDAQFGMPEVRVGI-PSVIHAALLPRLIGWARTRWLLLTGETIDAAQALAWGLVDRVVPLAE 189 (256)
T ss_pred EeehhHHHHHhCCEEEecCCCEEeCCccccCC-CCccHHHHHHHhcCHHHHHHHHHcCCcCCHHHHHHCCCcCeecCHHH
Confidence 99999999999999999999999999999998 7788899999999999 999999999999999999999999999887
Q ss_pred hhHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHHH
Q 019601 159 LPLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLK 238 (338)
Q Consensus 159 l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~ 238 (338)
+.+.. .+++++++
T Consensus 190 l~~~a-------------------------------------------------------------------~~~a~~la 202 (256)
T PRK06143 190 LDAAV-------------------------------------------------------------------ERLAASLA 202 (256)
T ss_pred HHHHH-------------------------------------------------------------------HHHHHHHH
Confidence 75422 25699999
Q ss_pred hcCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCC
Q 019601 239 EASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDK 294 (338)
Q Consensus 239 ~~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k 294 (338)
..+|.+++.+|++++.....++.++++.|...+...+. ++|++||+++|+ +|
T Consensus 203 ~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---~~d~~e~~~af~-ek 254 (256)
T PRK06143 203 GCGPQALRQQKRLLREWEDMPLDVAIDDSVAEFGAAFL---TGEPQRHMAAFL-NR 254 (256)
T ss_pred cCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHhc---ChHHHHHHHHHH-hh
Confidence 99999999999999988888999999999998888765 899999999999 77
No 44
>PRK07260 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=8.9e-45 Score=335.17 Aligned_cols=223 Identities=23% Similarity=0.384 Sum_probs=198.2
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGIT 80 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a 80 (338)
|+.+|.++++.++.|+++++|||+|.|++||+|+|++++..............+.+.+++++.++.++||||||+|||+|
T Consensus 30 ~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a 109 (255)
T PRK07260 30 MCQEILEALRLAEEDPSVRFLLINANGKVFSVGGDLVEMKRAVDEDDVQSLVKIAELVNEISFAIKQLPKPVIMCVDGAV 109 (255)
T ss_pred HHHHHHHHHHHHhcCCCceEEEEECCCCCcccccCHHHHHhhccccchhhHHHHHHHHHHHHHHHHcCCCCEEEEecCee
Confidence 57899999999999999999999999999999999998854221111222223445567788899999999999999999
Q ss_pred ccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccCCCh
Q 019601 81 MGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLNGRL 159 (338)
Q Consensus 81 ~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l 159 (338)
+|||++|+++||+||++++++|++||+++|++|++|+++++++++|.. ++++++||++++|+||+++|||+++||++++
T Consensus 110 ~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~l~g~~~sa~eA~~~Glv~~vv~~~~l 189 (255)
T PRK07260 110 AGAAANMAVAADFCIASTKTKFIQAFVGVGLAPDAGGLFLLTRAIGLNRATHLAMTGEALTAEKALEYGFVYRVAESEKL 189 (255)
T ss_pred ehhhHHHHHhCCEEEEeCCCEEechHhhcCCCCCCchhhhhHHhhCHHHHHHHHHhCCccCHHHHHHcCCcceecCHhHH
Confidence 999999999999999999999999999999999999999999999999 9999999999999999999999999998877
Q ss_pred hHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHHHh
Q 019601 160 PLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKE 239 (338)
Q Consensus 160 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~ 239 (338)
.+.. .++++++++
T Consensus 190 ~~~a-------------------------------------------------------------------~~~a~~la~ 202 (255)
T PRK07260 190 EKTC-------------------------------------------------------------------EQLLKKLRR 202 (255)
T ss_pred HHHH-------------------------------------------------------------------HHHHHHHHc
Confidence 5422 256999999
Q ss_pred cCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCC
Q 019601 240 ASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDK 294 (338)
Q Consensus 240 ~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k 294 (338)
.+|.+++.+|+.++.....++++.+..|...+...+. ++|++||+++|+ +|
T Consensus 203 ~~~~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~e~~~af~-~k 253 (255)
T PRK07260 203 GSSNSYAAIKSLVWESFFKGWEDYAKLELALQESLAF---KEDFKEGVRAFS-ER 253 (255)
T ss_pred CCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHH-hc
Confidence 9999999999999998888999999999998888775 999999999999 76
No 45
>TIGR01929 menB naphthoate synthase (dihydroxynaphthoic acid synthetase). This model represents an enzyme, naphthoate synthase (dihydroxynaphthoic acid synthetase), which is involved in the fifth step of the menaquinone biosynthesis pathway. Together with o-succinylbenzoate-CoA ligase (menE: TIGR01923), this enzyme takes 2-succinylbenzoate and converts it into 1,4-di-hydroxy-2-naphthoate. Included above the trusted cutoff are two enzymes from Arabadopsis thaliana and one from Staphylococcus aureus which are identified as putative enoyl-CoA hydratase/isomerases. These enzymes group with the naphthoate synthases when building a tree and when doing BLAST searches.
Probab=100.00 E-value=1e-44 Score=335.50 Aligned_cols=226 Identities=19% Similarity=0.233 Sum_probs=191.2
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCC-CCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAG-RAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGI 79 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~ 79 (338)
|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++.... ....... ....+..++..+..++|||||+|||+
T Consensus 31 ~~~el~~~l~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~-~~~~~~~--~~~~~~~~~~~l~~~~kPvIAav~G~ 107 (259)
T TIGR01929 31 TVKEIIQALDDAREDPDIGVVILTGAGDKAFCSGGDQKVRGDYG-YIDDSGV--HRLNVLDVQRQIRTCPKPVIAMVNGY 107 (259)
T ss_pred HHHHHHHHHHHHhhCCCeEEEEEEeCCCCceEeCcChHhHhhcc-ccchhhH--HHHHHHHHHHHHHhCCCCEEEEEcCE
Confidence 578999999999999999999999999 8999999999864211 0001111 11123467778899999999999999
Q ss_pred cccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccCCC
Q 019601 80 TMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLNGR 158 (338)
Q Consensus 80 a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~ 158 (338)
|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. ++++++||+.++|+||+++|||++|||+++
T Consensus 108 a~GgG~~lalacD~~ia~~~a~f~~pe~~~G~~p~~~~~~~l~~~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~ 187 (259)
T TIGR01929 108 AIGGGHVLHVVCDLTIAAENARFGQTGPKVGSFDGGYGSSYLARIVGQKKAREIWFLCRQYDAEQALDMGLVNTVVPLAD 187 (259)
T ss_pred EehHHHHHHHhCCEEEecCCCEecCcccccccCCCccHHHHHHHHhHHHHHHHHHHhCCccCHHHHHHcCCcccccCHHH
Confidence 9999999999999999999999999999999999999999999999999 999999999999999999999999999877
Q ss_pred hhHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHHH
Q 019601 159 LPLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLK 238 (338)
Q Consensus 159 l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~ 238 (338)
+.... .+++++|+
T Consensus 188 l~~~a-------------------------------------------------------------------~~~a~~la 200 (259)
T TIGR01929 188 LEKET-------------------------------------------------------------------VRWCREIL 200 (259)
T ss_pred HHHHH-------------------------------------------------------------------HHHHHHHH
Confidence 65322 25699999
Q ss_pred hcCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCCCC
Q 019601 239 EASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDP 302 (338)
Q Consensus 239 ~~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~~~ 302 (338)
+.+|.+++.+|++++..... .......|...+...+. ++|+++|+++|+ +| |+|.|+.
T Consensus 201 ~~~~~a~~~~K~~l~~~~~~-~~~~~~~e~~~~~~~~~---~~d~~egi~af~-~k-r~p~~~~ 258 (259)
T TIGR01929 201 QKSPMAIRMLKAALNADCDG-QAGLQELAGNATMLFYM---TEEGQEGRNAFL-EK-RQPDFSK 258 (259)
T ss_pred hCCHHHHHHHHHHHHhhhcc-chHHHHHHHHHHHHHhc---CccHHHHHHHHh-cc-CCCCCCC
Confidence 99999999999999876543 34455556666666654 999999999999 88 8999973
No 46
>PRK05864 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.1e-44 Score=338.19 Aligned_cols=231 Identities=20% Similarity=0.256 Sum_probs=195.8
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccC---ChhhHHHHHHHHHHHHHHHhhCCCCEEEEEc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEG---KFEDFKNFFETLYQFVYLQGTFVKPHVAILD 77 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~ 77 (338)
|+.+|.++++.++.|+++|+|||+|.|++||+|+|++++....... ...........+..++..+..++|||||+||
T Consensus 38 ~~~~L~~~l~~~~~d~~vrvvVl~g~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~ 117 (276)
T PRK05864 38 VMVPLKEALAEVSYDNSVRVVVLTGAGRGFSSGADHKSAGVVPHVEGLTRPTYALRSMELLDDVILALRRLHQPVIAAVN 117 (276)
T ss_pred HHHHHHHHHHHHhcCCCceEEEEECCCCCeecCcchhhhhcccccccccchhHHHHHHHHHHHHHHHHHhCCCCEEEEEC
Confidence 5789999999999999999999999999999999999874211000 0111122344566778889999999999999
Q ss_pred cccccchhhhhhcCCeEEEeCceeEecCCCCcCcCC-CcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceecc
Q 019601 78 GITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHP-DAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTL 155 (338)
Q Consensus 78 G~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p-~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~ 155 (338)
|+|+|||++|+++||+|||+++++|++||+++|++| ++|++++|++++|.. ++++++||+.++|+||+++|||++|||
T Consensus 118 G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~~g~~~~l~~~vG~~~A~~l~l~g~~~~a~eA~~~Glv~~vv~ 197 (276)
T PRK05864 118 GPAIGGGLCLALAADIRVASSSAYFRAAGINNGLTASELGLSYLLPRAIGSSRAFEIMLTGRDVDAEEAERIGLVSRQVP 197 (276)
T ss_pred CEeehhHHHHHHhCCEEEeeCCCEecCcccccCCCCCCcchheehHhhhCHHHHHHHHHcCCccCHHHHHHcCCcceeeC
Confidence 999999999999999999999999999999999997 788899999999999 999999999999999999999999999
Q ss_pred CCChhHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHH
Q 019601 156 NGRLPLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVE 235 (338)
Q Consensus 156 ~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~ 235 (338)
++++.+.. .++++
T Consensus 198 ~~~l~~~a-------------------------------------------------------------------~~~a~ 210 (276)
T PRK05864 198 DEQLLDTC-------------------------------------------------------------------YAIAA 210 (276)
T ss_pred HHHHHHHH-------------------------------------------------------------------HHHHH
Confidence 88775322 25699
Q ss_pred HHHhcCchHHHHHHHHHHhhccC-CHHHHHHHHHHHHH-HhcccCCCCcHHhhHhhhhcCCCCCCCCCCC
Q 019601 236 KLKEASPLSLKVTLQSIREGRFQ-SLDQCLVREYRITL-NGISKKVSNDFCEGIRARLVDKDFAPKWDPP 303 (338)
Q Consensus 236 ~i~~~sp~al~~~k~~l~~~~~~-~~~~~l~~e~~~~~-~~~~~~~~~d~~egi~~fl~~k~r~p~~~~~ 303 (338)
+|++.+|.+++.+|++++..... ++.+.++.|..... ..+ .++|++||+++|+ +| |+|.|++.
T Consensus 211 ~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~~e~~~~~~~~~---~~~d~~e~~~af~-~k-r~p~~~~~ 275 (276)
T PRK05864 211 RMAGFSRPGIELTKRTLWSGLDAASLEAHMQAEGLGQLFVRL---LTANFEEAVAARA-EK-RPPVFTDD 275 (276)
T ss_pred HHHhCCHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHhc---cChhHHHHHHHHh-cc-CCCCCCCC
Confidence 99999999999999999987665 78888887765322 233 3899999999999 88 89999754
No 47
>PRK08260 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.4e-44 Score=338.96 Aligned_cols=230 Identities=21% Similarity=0.272 Sum_probs=193.3
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccC------------Chh-hHHHHHHHHHHHHHHHhh
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEG------------KFE-DFKNFFETLYQFVYLQGT 67 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~------------~~~-~~~~~~~~~~~~~~~i~~ 67 (338)
|+.+|.++++.++.|+++++|||||.|++||+|+|++++....... ... ....+...+..++..+..
T Consensus 32 ~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 111 (296)
T PRK08260 32 MARELIEAFDAADADDAVRAVIVTGAGRAFCAGADLSAGGNTFDLDAPRTPVEADEEDRADPSDDGVRDGGGRVTLRIFD 111 (296)
T ss_pred HHHHHHHHHHHHhcCCCeEEEEEECCCCCeecCcChHHhhhcccccccccccccccccccchhHHHHHHHHHHHHHHHHh
Confidence 5789999999999999999999999999999999999874211000 001 112233345567888999
Q ss_pred CCCCEEEEEccccccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHH
Q 019601 68 FVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIA 146 (338)
Q Consensus 68 ~~kP~Iaav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~ 146 (338)
+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. ++++++||+.++|+||++
T Consensus 112 ~pkPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~llltg~~~~a~eA~~ 191 (296)
T PRK08260 112 SLKPVIAAVNGPAVGVGATMTLAMDIRLASTAARFGFVFGRRGIVPEAASSWFLPRLVGLQTALEWVYSGRVFDAQEALD 191 (296)
T ss_pred CCCCEEEEECCeeehHhHHHHHhCCEEEeeCCCEEecchhhcCcCCCcchhhhHHHhhCHHHHHHHHHcCCccCHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999 999999999999999999
Q ss_pred cCccceeccCCChhHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccc
Q 019601 147 CGLATHYTLNGRLPLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSY 226 (338)
Q Consensus 147 ~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~ 226 (338)
+|||++|||++++... +
T Consensus 192 ~GLv~~vv~~~~l~~~--a------------------------------------------------------------- 208 (296)
T PRK08260 192 GGLVRSVHPPDELLPA--A------------------------------------------------------------- 208 (296)
T ss_pred CCCceeecCHHHHHHH--H-------------------------------------------------------------
Confidence 9999999998776532 1
Q ss_pred cHHHHHHHHHHHhc-CchHHHHHHHHHHhhccC--CHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCCCCC
Q 019601 227 DVWCRKAVEKLKEA-SPLSLKVTLQSIREGRFQ--SLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDPP 303 (338)
Q Consensus 227 ~~~a~~~a~~i~~~-sp~al~~~k~~l~~~~~~--~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~~~~ 303 (338)
.+++++|+.+ +|.+++.+|++++..... ... ....|...+...+. ++|++||+++|+ +| |+|.|+++
T Consensus 209 ----~~~a~~i~~~~~~~a~~~~K~~l~~~~~~~~~~~-~~~~e~~~~~~~~~---~~d~~egi~af~-~k-r~p~f~~~ 278 (296)
T PRK08260 209 ----RALAREIADNTSPVSVALTRQMMWRMAGADHPME-AHRVDSRAIYSRGR---SGDGKEGVSSFL-EK-RPAVFPGK 278 (296)
T ss_pred ----HHHHHHHHhcCChHHHHHHHHHHHhcccCCCcHH-HHHHHHHHHHHHcc---ChhHHHHHHHHh-cC-CCCCCCCC
Confidence 2568999985 899999999999976432 334 34557666666654 999999999999 88 89999875
No 48
>PRK06144 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.3e-44 Score=333.62 Aligned_cols=223 Identities=26% Similarity=0.351 Sum_probs=192.5
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCC-CCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAG-RAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGI 79 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~ 79 (338)
|+++|.+++++++.|+++++|||||.| ++||+|+|++++.... ..+....+...+..++..+..+||||||+|||+
T Consensus 36 ~~~~l~~~l~~~~~d~~v~~vVltg~g~~~F~aG~Dl~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~ 112 (262)
T PRK06144 36 MYEGLAEICEAIAADPSIRAVVLRGAGDKAFVAGTDIAQFRAFS---TAEDAVAYERRIDRVLGALEQLRVPTIAAIAGA 112 (262)
T ss_pred HHHHHHHHHHHHhcCCCceEEEEecCCCCceecCcCHHHHhhcc---chhHHHHHHHHHHHHHHHHHhCCCCEEEEECCe
Confidence 578999999999999999999999998 7999999999875321 112223344556778888999999999999999
Q ss_pred cccchhhhhhcCCeEEEeCceeEecCCCC-cCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccCC
Q 019601 80 TMGCGAGISLQGMYRVVTDKTVFSNPETQ-MGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLNG 157 (338)
Q Consensus 80 a~GgG~~lala~D~ria~~~a~f~~pe~~-~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~ 157 (338)
|+|||++|+++||+|||+++++|++||++ +|++|++|++++|++++|.. ++++++||+.++|+||+++|||++|||++
T Consensus 113 a~GgG~~lala~D~~ia~~~a~f~~pe~~~~G~~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~ 192 (262)
T PRK06144 113 CVGGGAAIAAACDLRIATPSARFGFPIARTLGNCLSMSNLARLVALLGAARVKDMLFTARLLEAEEALAAGLVNEVVEDA 192 (262)
T ss_pred eeehHHHHHHhCCEEEecCCCEeechhHHhccCCCCccHHHHHHHHhCHHHHHHHHHcCCCcCHHHHHHcCCcCeecCHH
Confidence 99999999999999999999999999997 99999999999999999999 99999999999999999999999999988
Q ss_pred ChhHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHH
Q 019601 158 RLPLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKL 237 (338)
Q Consensus 158 ~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i 237 (338)
++.+.. .+++++|
T Consensus 193 ~l~~~a-------------------------------------------------------------------~~~a~~i 205 (262)
T PRK06144 193 ALDARA-------------------------------------------------------------------DALAELL 205 (262)
T ss_pred HHHHHH-------------------------------------------------------------------HHHHHHH
Confidence 775422 2579999
Q ss_pred HhcCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCCCC
Q 019601 238 KEASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDP 302 (338)
Q Consensus 238 ~~~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~~~ 302 (338)
++.||.++..+|+.++......+.. +...+...+. ++|+++|+++|+ +| |+|.|++
T Consensus 206 ~~~~~~a~~~~K~~l~~~~~~~l~~----~~~~~~~~~~---~~~~~e~~~af~-~k-r~p~~~~ 261 (262)
T PRK06144 206 AAHAPLTLRATKEALRRLRREGLPD----GDDLIRMCYM---SEDFREGVEAFL-EK-RPPKWKG 261 (262)
T ss_pred HhCCHHHHHHHHHHHHHhhhcCHHH----HHHHHHHHhc---ChHHHHHHHHHh-cC-CCCCCCC
Confidence 9999999999999998776554433 4445555554 899999999999 88 8999975
No 49
>PRK07938 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=3.1e-44 Score=330.33 Aligned_cols=220 Identities=18% Similarity=0.168 Sum_probs=192.8
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGIT 80 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a 80 (338)
|+.+|.++++.++.|+++|+|||||.|++||+|+|++++... ........+...+..++..+.+++|||||+|||+|
T Consensus 29 ~~~~l~~~l~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~kPvIAav~G~a 105 (249)
T PRK07938 29 GWFALADAITAAGADPDTRVVVLRAEGRGFNAGVDIKELQAT---PGFTALIDANRGCFAAFRAVYECAVPVIAAVHGFC 105 (249)
T ss_pred HHHHHHHHHHHhhcCCCeEEEEEECCCCceecCcCHHHHhhc---cchhHHHHHHHHHHHHHHHHHhCCCCEEEEEcCEE
Confidence 578999999999999999999999999999999999987431 11122223334556778889999999999999999
Q ss_pred ccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccCCCh
Q 019601 81 MGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLNGRL 159 (338)
Q Consensus 81 ~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l 159 (338)
+|||++|+++||+||++++++|++||+++|++ |++++|++++|.. ++++++||+.++|+||+++|||+++||++++
T Consensus 106 ~GgG~~Lal~cD~ria~~~a~f~~pe~~~G~~---g~~~~l~~~vg~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l 182 (249)
T PRK07938 106 LGGGIGLVGNADVIVASDDATFGLPEVDRGAL---GAATHLQRLVPQHLMRALFFTAATITAAELHHFGSVEEVVPRDQL 182 (249)
T ss_pred eehHHHHHHhCCEEEEeCCCEeeCccceecCc---hhHHHHHHhcCHHHHHHHHHhCCcCCHHHHHHCCCccEEeCHHHH
Confidence 99999999999999999999999999999985 5567899999999 9999999999999999999999999998877
Q ss_pred hHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHHHh
Q 019601 160 PLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKE 239 (338)
Q Consensus 160 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~ 239 (338)
.+.. .+++++|+.
T Consensus 183 ~~~a-------------------------------------------------------------------~~~a~~la~ 195 (249)
T PRK07938 183 DEAA-------------------------------------------------------------------LEVARKIAA 195 (249)
T ss_pred HHHH-------------------------------------------------------------------HHHHHHHHh
Confidence 5322 256999999
Q ss_pred cCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCC
Q 019601 240 ASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAP 298 (338)
Q Consensus 240 ~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p 298 (338)
++|.+++.+|++++.....++++.++.|.......+. ++|++||+++|+ +| |+|
T Consensus 196 ~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---~~d~~eg~~af~-ek-r~p 249 (249)
T PRK07938 196 KDTRVIRAAKEALNGIDPQDVERSYRWEQGFTFELNL---AGVSDEHRDAFV-EK-RKA 249 (249)
T ss_pred CCHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHhc---CccHHHHHHHHH-hc-CCC
Confidence 9999999999999988788899999999888877765 999999999999 88 776
No 50
>TIGR03210 badI 2-ketocyclohexanecarboxyl-CoA hydrolase. Members of this protein family are 2-ketocyclohexanecarboxyl-CoA hydrolase, a ring-opening enzyme that acts in catabolism of molecules such as benzoyl-CoA and cyclohexane carboxylate. It converts -ketocyclohexanecarboxyl-CoA to pimelyl-CoA. It is not sensitive to oxygen.
Probab=100.00 E-value=2.6e-44 Score=332.16 Aligned_cols=223 Identities=17% Similarity=0.217 Sum_probs=187.5
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCC-CCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAG-RAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGI 79 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~ 79 (338)
|+.+|.++++.++.|+++++|||||.| ++||+|+|++++... .+....+...+..++..+..++|||||+|||+
T Consensus 30 ~~~~l~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~ 104 (256)
T TIGR03210 30 TCDELIHALKDAGYDRQIGVIVLAGAGDKAFCTGGDQSTHDGG-----YDGRGTIGLPMEELHSAIRDVPKPVIARVQGY 104 (256)
T ss_pred HHHHHHHHHHHHhcCCCceEEEEecCCCCceecCcChHHHhcc-----ccchhHHHHHHHHHHHHHHhCCCCEEEEECCE
Confidence 578999999999999999999999999 799999999987321 11111122345678889999999999999999
Q ss_pred cccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccCCC
Q 019601 80 TMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLNGR 158 (338)
Q Consensus 80 a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~ 158 (338)
|+|||++|+++||+||++++++|++||+++|++|+++++++|++++|.. ++++++||+.++|+||+++|||+++||+++
T Consensus 105 a~GgG~~lal~cD~~ia~~~a~f~~pe~~~G~~~~~~~~~~l~~~vG~~~A~~lll~g~~~~a~eA~~~Glv~~vv~~~~ 184 (256)
T TIGR03210 105 AIGGGNVLVTICDLTIASEKAQFGQVGPKVGSVDPGYGTALLARVVGEKKAREIWYLCRRYTAQEALAMGLVNAVVPHDQ 184 (256)
T ss_pred EehhhHHHHHhCCEEEEeCCCEEecccccccccCCccHHHHHHHHhCHHHHHHHHHhCCCcCHHHHHHcCCceeeeCHHH
Confidence 9999999999999999999999999999999998888889999999999 999999999999999999999999999887
Q ss_pred hhHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHHH
Q 019601 159 LPLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLK 238 (338)
Q Consensus 159 l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~ 238 (338)
+.+.. .+++++|+
T Consensus 185 l~~~a-------------------------------------------------------------------~~~a~~ia 197 (256)
T TIGR03210 185 LDAEV-------------------------------------------------------------------QKWCDEIV 197 (256)
T ss_pred HHHHH-------------------------------------------------------------------HHHHHHHH
Confidence 75422 25799999
Q ss_pred hcCchHHHHHHHHHHhhccCCH-HHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCCCC
Q 019601 239 EASPLSLKVTLQSIREGRFQSL-DQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDP 302 (338)
Q Consensus 239 ~~sp~al~~~k~~l~~~~~~~~-~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~~~ 302 (338)
+.+|.+++.+|++++....... .+.+ |...+...+. ++|++||+++|+ +| |+|.|++
T Consensus 198 ~~~~~a~~~~K~~l~~~~~~~~~~~~~--~~~~~~~~~~---~~d~~e~~~af~-~k-r~p~~~~ 255 (256)
T TIGR03210 198 EKSPTAIAIAKRSFNMDTAHQRGIAGM--GMYALKLYYD---TAESREGVKAFQ-EK-RKPEFRK 255 (256)
T ss_pred hCCHHHHHHHHHHHHHhhcccchHHHH--HHHHHHHHcc---ChhHHHHHHHHh-cc-CCCCCCC
Confidence 9999999999999987654321 1122 3344444543 899999999999 88 8999974
No 51
>PRK06072 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=8e-44 Score=327.47 Aligned_cols=221 Identities=21% Similarity=0.290 Sum_probs=195.1
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGIT 80 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a 80 (338)
|+++|.++++.++.|+++++|||||.|++||+|+|++++... ....+...++.++..+..++|||||+|||+|
T Consensus 28 ~~~~l~~a~~~~~~d~~vr~vVl~g~g~~F~aG~Dl~~~~~~-------~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a 100 (248)
T PRK06072 28 MRNEFISKLKQINADPKIRVVIVTGEGRAFCVGADLSEFAPD-------FAIDLRETFYPIIREIRFSDKIYISAINGVT 100 (248)
T ss_pred HHHHHHHHHHHHhcCCCeeEEEEECCCCCcccCcCHHHHhhh-------hHHHHHHHHHHHHHHHHhCCCCEEEEECCee
Confidence 578999999999999999999999999999999999987431 0122334556778889999999999999999
Q ss_pred ccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchHHHHHhhhCCCCCHHHHHHcCccceeccCCChh
Q 019601 81 MGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYLGEYLALTGEKLNGVEMIACGLATHYTLNGRLP 160 (338)
Q Consensus 81 ~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l~ 160 (338)
+|||++|+++||+||++++++|++||+++|++|++|+++++++++|..++++++||+.++|+||+++|||+.+ +++.
T Consensus 101 ~GgG~~lal~cD~~ia~~~a~f~~~~~~~Gl~p~~g~~~~l~~~~g~~a~~lll~g~~~~a~eA~~~Glv~~~---~~~~ 177 (248)
T PRK06072 101 AGACIGIALSTDFKFASRDVKFVTAFQRLGLASDTGVAYFLLKLTGQRFYEILVLGGEFTAEEAERWGLLKIS---EDPL 177 (248)
T ss_pred ehHHHHHHHhCCEEEEcCCCEEecchhhcCcCCCchHHHHHHHHhhHHHHHHHHhCCccCHHHHHHCCCcccc---chHH
Confidence 9999999999999999999999999999999999999999999999669999999999999999999999953 2332
Q ss_pred HHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHHHhc
Q 019601 161 LVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKEA 240 (338)
Q Consensus 161 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~ 240 (338)
+ . +.+++++|++.
T Consensus 178 ~--~-----------------------------------------------------------------a~~~a~~la~~ 190 (248)
T PRK06072 178 S--D-----------------------------------------------------------------AEEMANRISNG 190 (248)
T ss_pred H--H-----------------------------------------------------------------HHHHHHHHHhC
Confidence 1 2 22679999999
Q ss_pred CchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCCCCC
Q 019601 241 SPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDPP 303 (338)
Q Consensus 241 sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~~~~ 303 (338)
+|.+++.+|++++.....++++.++.|...+..++. ++|++||+++|+ +| |+|.|+++
T Consensus 191 ~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---~~d~~eg~~af~-~k-r~p~~~~~ 248 (248)
T PRK06072 191 PFQSYIAAKRMINLVLYNDLEEFLEYESAIQGYLGK---TEDFKEGISSFK-EK-REPKFKGI 248 (248)
T ss_pred CHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHhC---ChhHHHHHHHHh-cC-CCCCCCCC
Confidence 999999999999988888999999999998887765 999999999999 88 89999853
No 52
>PRK07509 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=7.1e-44 Score=330.40 Aligned_cols=226 Identities=21% Similarity=0.247 Sum_probs=196.1
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHH----HHHHHHHHHHHHHhhCCCCEEEEE
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFK----NFFETLYQFVYLQGTFVKPHVAIL 76 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~~~~kP~Iaav 76 (338)
|+++|.++++.++.|+++++|||||.|++||+|+|++++.... ........ .....+..++..+..+||||||+|
T Consensus 31 ~~~~l~~al~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kpvIaav 109 (262)
T PRK07509 31 MFEELIATIKRLKKDRGIRAVILSGEGGAFCAGLDVKSVASSP-GNAVKLLFKRLPGNANLAQRVSLGWRRLPVPVIAAL 109 (262)
T ss_pred HHHHHHHHHHHHhhCCCCeEEEEECCCCCcCCCcCHHHHhccc-chhhhhHhhhhHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 5789999999999999999999999999999999999875321 11111111 112234556777889999999999
Q ss_pred ccccccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceecc
Q 019601 77 DGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTL 155 (338)
Q Consensus 77 ~G~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~ 155 (338)
||+|+|||++|+++||+|||+++++|++||+++|++|++|+++++++++|.. ++++++||+.++|+||+++|||+++|+
T Consensus 110 ~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~g~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~ 189 (262)
T PRK07509 110 EGVCFGGGLQIALGADIRIAAPDTKLSIMEAKWGLVPDMAGTVSLRGLVRKDVARELTYTARVFSAEEALELGLVTHVSD 189 (262)
T ss_pred CCeeecchHHHHHhCCEEEecCCCEeecchhccCCCCCchHHHHHHHHhCHHHHHHHHHcCCCcCHHHHHHcCChhhhhc
Confidence 9999999999999999999999999999999999999999999999999999 999999999999999999999999995
Q ss_pred CCChhHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHH
Q 019601 156 NGRLPLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVE 235 (338)
Q Consensus 156 ~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~ 235 (338)
+ +.+ . +.++++
T Consensus 190 ~--~~~--~-----------------------------------------------------------------a~~~a~ 200 (262)
T PRK07509 190 D--PLA--A-----------------------------------------------------------------ALALAR 200 (262)
T ss_pred h--HHH--H-----------------------------------------------------------------HHHHHH
Confidence 3 321 1 126799
Q ss_pred HHHhcCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCCC
Q 019601 236 KLKEASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWD 301 (338)
Q Consensus 236 ~i~~~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~~ 301 (338)
+|++.+|.++..+|++++.....++.++++.|...+...+. ++|+++|+++|+ +| |+|.|+
T Consensus 201 ~l~~~~~~~~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~d~~e~~~af~-ek-r~p~~~ 261 (262)
T PRK07509 201 EIAQRSPDAIAAAKRLINRSWTASVRALLARESVEQIRLLL---GKNQKIAVKAQM-KK-RAPKFL 261 (262)
T ss_pred HHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc---ChhHHHHHHHHh-cC-CCCCCC
Confidence 99999999999999999998888999999999998888775 999999999999 88 899986
No 53
>PRK07396 dihydroxynaphthoic acid synthetase; Validated
Probab=100.00 E-value=7.1e-44 Score=332.17 Aligned_cols=227 Identities=18% Similarity=0.235 Sum_probs=192.0
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCC-CCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAG-RAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGI 79 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~ 79 (338)
|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++.... ....+.... . ....++..+..++|||||+|||+
T Consensus 41 ~~~~l~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~-~~~~~~~~~-~-~~~~~~~~l~~~~kPvIAav~G~ 117 (273)
T PRK07396 41 TVKEMIDAFADARDDDNIGVIILTGAGDKAFCSGGDQKVRGYGG-YVDDDGVPR-L-NVLDLQRLIRTCPKPVIAMVAGY 117 (273)
T ss_pred HHHHHHHHHHHHhhCCCceEEEEEeCCCCceEeCcChhhhhccc-ccchhhhhh-h-HHHHHHHHHHhCCCCEEEEECCE
Confidence 578999999999999999999999999 6999999999864211 001111111 1 23456778899999999999999
Q ss_pred cccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccCCC
Q 019601 80 TMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLNGR 158 (338)
Q Consensus 80 a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~ 158 (338)
|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. ++++++||+.++|+||+++||||+|||+++
T Consensus 118 a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~~~~~~l~~~vG~~~a~~l~ltg~~~~A~eA~~~GLv~~vv~~~~ 197 (273)
T PRK07396 118 AIGGGHVLHLVCDLTIAADNAIFGQTGPKVGSFDGGYGASYLARIVGQKKAREIWFLCRQYDAQEALDMGLVNTVVPLAD 197 (273)
T ss_pred EehHHHHHHHhCCEEEeeCCcEEecccccccccCCchHHHHHHHHhhHHHHHHHHHhCCCcCHHHHHHcCCcCeecCHHH
Confidence 9999999999999999999999999999999999999999999999999 999999999999999999999999999877
Q ss_pred hhHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHHH
Q 019601 159 LPLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLK 238 (338)
Q Consensus 159 l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~ 238 (338)
+.+.. .+++++|+
T Consensus 198 l~~~a-------------------------------------------------------------------~~~a~~la 210 (273)
T PRK07396 198 LEKET-------------------------------------------------------------------VRWCREML 210 (273)
T ss_pred HHHHH-------------------------------------------------------------------HHHHHHHH
Confidence 75422 25699999
Q ss_pred hcCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCCCCC
Q 019601 239 EASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDPP 303 (338)
Q Consensus 239 ~~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~~~~ 303 (338)
..+|.+++.+|++++.... ......+.|...+...+. ++|++||+.+|+ +| |+|.|+..
T Consensus 211 ~~~~~a~~~~K~~l~~~~~-~~~~~~~~e~~~~~~~~~---~~d~~egi~af~-~k-r~p~~~~~ 269 (273)
T PRK07396 211 QNSPMALRCLKAALNADCD-GQAGLQELAGNATMLFYM---TEEAQEGRNAFN-EK-RQPDFSKF 269 (273)
T ss_pred hCCHHHHHHHHHHHHhhhc-cHHHHHHHHHHHHHHHhc---ChhHHHHHHHHh-CC-CCCCCCCC
Confidence 9999999999999987654 455555567776666654 999999999999 88 89999853
No 54
>PRK07827 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1e-43 Score=328.98 Aligned_cols=226 Identities=20% Similarity=0.245 Sum_probs=197.5
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGIT 80 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a 80 (338)
|+.+|.++++.++.|+++++|||||.|++||+|+|++++.... ....+....++..+..+++.+..+||||||+|||+|
T Consensus 34 ~~~el~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a 112 (260)
T PRK07827 34 LVAQLHDGLRAAAADPAVRAVVLTHTGGTFCAGADLSEAGGGG-GDPYDAAVARAREMTALLRAIVELPKPVIAAIDGHV 112 (260)
T ss_pred HHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCcChHHHhhcc-cCchhHHHHHHHHHHHHHHHHHhCCCCEEEEEcCee
Confidence 5789999999999999999999999999999999999875321 011112234556677888999999999999999999
Q ss_pred ccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchHHHHHhhhCCCCCHHHHHHcCccceeccCCChh
Q 019601 81 MGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYLGEYLALTGEKLNGVEMIACGLATHYTLNGRLP 160 (338)
Q Consensus 81 ~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l~ 160 (338)
+|||++|+++||+|||+++++|++||+++|++|++|++++++++++..+++++++|+.++|+||+++|||+++++ ++.
T Consensus 113 ~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~l~~~~a~~l~l~g~~~~a~eA~~~Glv~~v~~--~l~ 190 (260)
T PRK07827 113 RAGGFGLVGACDIVVAGPESTFALTEARIGVAPAIISLTLLPRLSPRAAARYYLTGEKFGAAEAARIGLVTAAAD--DVD 190 (260)
T ss_pred ecchhhHHHhCCEEEEcCCCEEeCcccccCCCCCcccchhHHhhhHHHHHHHHHhCCccCHHHHHHcCCcccchH--HHH
Confidence 999999999999999999999999999999999999999999886544999999999999999999999999975 243
Q ss_pred HHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHHHhc
Q 019601 161 LVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKEA 240 (338)
Q Consensus 161 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~ 240 (338)
+. +.+++++|++.
T Consensus 191 ~~-------------------------------------------------------------------a~~~a~~la~~ 203 (260)
T PRK07827 191 AA-------------------------------------------------------------------VAALLADLRRG 203 (260)
T ss_pred HH-------------------------------------------------------------------HHHHHHHHHhC
Confidence 22 12568999999
Q ss_pred CchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCCC
Q 019601 241 SPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWD 301 (338)
Q Consensus 241 sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~~ 301 (338)
+|.+++.+|++++......+...++.|...+..++. ++|+++|+++|+ +| |+|.|+
T Consensus 204 ~~~a~~~~K~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~af~-~k-r~p~~~ 259 (260)
T PRK07827 204 SPQGLAESKALTTAAVLAGFDRDAEELTEESARLFV---SDEAREGMTAFL-QK-RPPRWA 259 (260)
T ss_pred CHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhc---ChhHHHHHHHHh-cC-CCCCCC
Confidence 999999999999998888999999999988888775 999999999999 88 889986
No 55
>PLN02888 enoyl-CoA hydratase
Probab=100.00 E-value=1.3e-43 Score=329.04 Aligned_cols=225 Identities=20% Similarity=0.275 Sum_probs=195.1
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGIT 80 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a 80 (338)
|+.+|.++++.++.|+++++|||||.|++||+|+|++++.... .. . .. .....++..+..++|||||+|||+|
T Consensus 38 ~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~-~~--~-~~---~~~~~~~~~i~~~~kPvIaav~G~a 110 (265)
T PLN02888 38 MMVELAAAFKRLDEDDSVKVIILTGSGRAFCSGVDLTAAEEVF-KG--D-VK---DVETDPVAQMERCRKPIIGAINGFA 110 (265)
T ss_pred HHHHHHHHHHHHhhCCCceEEEEECCCCcccCCCCHHHHHhhc-cc--h-hh---HHHHHHHHHHHhCCCCEEEEECCee
Confidence 5789999999999999999999999999999999999864321 11 1 11 1124566678999999999999999
Q ss_pred ccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccCCCh
Q 019601 81 MGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLNGRL 159 (338)
Q Consensus 81 ~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l 159 (338)
+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. ++++++||+.++|+||+++|||+++||++++
T Consensus 111 ~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l 190 (265)
T PLN02888 111 ITAGFEIALACDILVASRGAKFIDTHAKFGIFPSWGLSQKLSRIIGANRAREVSLTAMPLTAETAERWGLVNHVVEESEL 190 (265)
T ss_pred echHHHHHHhCCEEEecCCCEecCccccccCCCCccHhhHHHHHhCHHHHHHHHHhCCccCHHHHHHcCCccEeeChHHH
Confidence 999999999999999999999999999999999999999999999999 9999999999999999999999999998776
Q ss_pred hHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHHHh
Q 019601 160 PLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKE 239 (338)
Q Consensus 160 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~ 239 (338)
.+.. .+++++|++
T Consensus 191 ~~~a-------------------------------------------------------------------~~~a~~la~ 203 (265)
T PLN02888 191 LKKA-------------------------------------------------------------------REVAEAIIK 203 (265)
T ss_pred HHHH-------------------------------------------------------------------HHHHHHHHh
Confidence 5322 267999999
Q ss_pred cCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCCCC
Q 019601 240 ASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDP 302 (338)
Q Consensus 240 ~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~~~ 302 (338)
.+|.+++.+|++++.....++++++..|...+..++. ..++|++||+++|+ +| |+|+--+
T Consensus 204 ~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~-~~~~d~~e~~~af~-ek-r~~~~~~ 263 (265)
T PLN02888 204 NNQGMVLRYKSVINDGLKLDLGHALQLEKERAHDYYN-GMTKEQFQKMQEFI-AG-RSSKKPS 263 (265)
T ss_pred CCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhc-cCCHHHHHHHHHHH-hc-CCCCCCC
Confidence 9999999999999988888999999999887766541 23899999999999 88 7776443
No 56
>PRK11423 methylmalonyl-CoA decarboxylase; Provisional
Probab=100.00 E-value=1.1e-43 Score=328.94 Aligned_cols=224 Identities=17% Similarity=0.260 Sum_probs=195.0
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeC-C-CCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGA-G-RAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDG 78 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~-g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G 78 (338)
|+.+|.+++++++.|+ +++|||||. | ++||+|+|++++.... . ....+...+..++..+..+||||||+|||
T Consensus 32 ~~~~l~~al~~~~~d~-v~~vvltg~~~~~~FcaG~Dl~~~~~~~----~-~~~~~~~~~~~l~~~i~~~~kPvIaav~G 105 (261)
T PRK11423 32 LIDDLMQALSDLNRPE-IRVVILRAPSGSKVWSAGHDIHELPSGG----R-DPLSYDDPLRQILRMIQKFPKPVIAMVEG 105 (261)
T ss_pred HHHHHHHHHHHHhcCC-ceEEEEECCCCCCeeECCcCHHHHhhcc----c-cHHHHHHHHHHHHHHHHhCCCCEEEEEec
Confidence 5789999999999887 999999996 3 8999999999874311 1 11233455677888999999999999999
Q ss_pred ccccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccCC
Q 019601 79 ITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLNG 157 (338)
Q Consensus 79 ~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~ 157 (338)
+|+|||++|+++||+|||+++++|++||+++|++|++|+++++++++|.. +++++++|+.++|+||+++||||+|||++
T Consensus 106 ~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~~~~g~~~~l~~~vg~~~a~~l~l~g~~~~a~eA~~~GLv~~vv~~~ 185 (261)
T PRK11423 106 SVWGGAFELIMSCDLIIAASTSTFAMTPANLGVPYNLSGILNFTNDAGFHIVKEMFFTASPITAQRALAVGILNHVVEVE 185 (261)
T ss_pred EEechHHHHHHhCCEEEecCCCEecCchhhcCCCCCccHHHHHHHHhHHHHHHHHHHcCCCcCHHHHHHcCCcCcccCHH
Confidence 99999999999999999999999999999999999999999999999999 99999999999999999999999999987
Q ss_pred ChhHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHH
Q 019601 158 RLPLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKL 237 (338)
Q Consensus 158 ~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i 237 (338)
++.... .+++++|
T Consensus 186 ~l~~~a-------------------------------------------------------------------~~~a~~l 198 (261)
T PRK11423 186 ELEDFT-------------------------------------------------------------------LQMAHHI 198 (261)
T ss_pred HHHHHH-------------------------------------------------------------------HHHHHHH
Confidence 775422 3679999
Q ss_pred HhcCchHHHHHHHHHHhhcc-CCH-HHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCCCC
Q 019601 238 KEASPLSLKVTLQSIREGRF-QSL-DQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDP 302 (338)
Q Consensus 238 ~~~sp~al~~~k~~l~~~~~-~~~-~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~~~ 302 (338)
++.+|.+++.+|++++.... ..+ ...++.|...+..++. ++|+++|+.+|+ +| |+|.|+.
T Consensus 199 ~~~~~~a~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---s~d~~eg~~af~-~k-r~p~~~~ 260 (261)
T PRK11423 199 SEKAPLAIAVIKEQLRVLGEAHPMNPDEFERIQGLRRAVYD---SEDYQEGMNAFL-EK-RKPVFVG 260 (261)
T ss_pred HhcCHHHHHHHHHHHHhhcccCCcchHHHHHHHHHHHHHhC---ChhHHHHHHHHh-cc-CCCCCCC
Confidence 99999999999999986543 344 6788888888777765 999999999999 98 8999975
No 57
>COG1024 CaiD Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism]
Probab=100.00 E-value=1.9e-43 Score=326.70 Aligned_cols=223 Identities=27% Similarity=0.408 Sum_probs=197.0
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGIT 80 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a 80 (338)
|+.+|.++++.++.|+++|+|||||.|++||+|+|++.+.. .........++...+.++.++.+++|||||+|||+|
T Consensus 33 ~~~~l~~al~~~~~d~~vr~vvltg~g~~FsaG~Dl~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a 109 (257)
T COG1024 33 MLDELAEALDEAEADPDVRVVVLTGAGKAFSAGADLKELLS---PEDGNAAENLMQPGQDLLRALADLPKPVIAAVNGYA 109 (257)
T ss_pred HHHHHHHHHHHHhhCCCeEEEEEECCCCceecccCHHHHhc---ccchhHHHHHHhHHHHHHHHHHhCCCCEEEEEcceE
Confidence 57899999999999999999999999999999999999864 111222235667778899999999999999999999
Q ss_pred ccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccC-CC
Q 019601 81 MGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLN-GR 158 (338)
Q Consensus 81 ~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~-~~ 158 (338)
+|||++|+++||+|||+++++|++||+++|++|++|++++++|++|.. ++++++||+.++++||+++|||+++|+. ++
T Consensus 110 ~GgG~eLal~~D~ria~~~a~f~~pe~~iGl~Pg~g~~~~l~r~~G~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~~ 189 (257)
T COG1024 110 LGGGLELALACDIRIAAEDAKFGLPEVNLGLLPGDGGTQRLPRLLGRGRAKELLLTGEPISAAEALELGLVDEVVPDAEE 189 (257)
T ss_pred eechhhhhhcCCeEEecCCcEecCcccccccCCCCcHHHHHHHhcCHHHHHHHHHcCCcCCHHHHHHcCCcCeeeCCHHH
Confidence 999999999999999999999999999999999889999999999999 9999999999999999999999999986 46
Q ss_pred hhHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHHH
Q 019601 159 LPLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLK 238 (338)
Q Consensus 159 l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~ 238 (338)
+.+... +++++++
T Consensus 190 l~~~a~-------------------------------------------------------------------~~a~~~a 202 (257)
T COG1024 190 LLERAL-------------------------------------------------------------------ELARRLA 202 (257)
T ss_pred HHHHHH-------------------------------------------------------------------HHHHHHc
Confidence 653222 4566666
Q ss_pred hcCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCC
Q 019601 239 EASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKW 300 (338)
Q Consensus 239 ~~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~ 300 (338)
. +|.++..+|+.++.....++.+.+..+...+...+. ++|++||+++|+ + |+|.|
T Consensus 203 ~-~~~a~~~~k~~~~~~~~~~l~~~~~~~~~~~~~~~~---~~d~~eg~~a~~-~--r~p~~ 257 (257)
T COG1024 203 A-PPLALAATKRLVRAALEADLAEALEAEALAFARLFS---SEDFREGVRAFL-E--RKPVF 257 (257)
T ss_pred c-CHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHhc---ChhHHHHHHHHH-c--cCCCC
Confidence 6 999999999999998777799999999998887554 899999999999 5 78877
No 58
>PF00378 ECH: Enoyl-CoA hydratase/isomerase family; InterPro: IPR001753 The crotonase superfamily is comprised of mechanistically diverse proteins that share a conserved trimeric quaternary structure (sometimes a hexamer consisting of a dimer of trimers), the core of which consists of 4 turns of a (beta/beta/alpha)n superhelix. Some enzymes in the superfamily have been shown to display dehalogenase, hydratase, and isomerase activities, while others have been implicated in carbon-carbon bond formation and cleavage as well as the hydrolysis of thioesters []. However, these different enzymes share the need to stabilise an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two structurally conserved peptidic NH groups that provide hydrogen bonds to the carbonyl moieties of the acyl-CoA substrates and form an "oxyanion hole". The CoA thioester derivatives bind in a characteristic hooked shape and a conserved tunnel binds the pantetheine group of CoA, which links the 3'-phosphate ADP binding site to the site of reaction []. Enzymes in the crotonase superfamily include: Enoyl-CoA hydratase (crotonase; 4.2.1.17 from EC), which catalyses the hydratation of 2-trans-enoyl-CoA into 3-hydroxyacyl-CoA []. 3-2trans-enoyl-CoA isomerase (or dodecenoyl-CoA isomerise; 5.3.3.8 from EC), which shifts the 3-double bond of the intermediates of unsaturated fatty acid oxidation to the 2-trans position []. 3-hydroxbutyryl-CoA dehydratase (crotonase; 4.2.1.55 from EC), a bacterial enzyme involved in the butyrate/butanol-producing pathway. 4-Chlorobenzoyl-CoA dehalogenase (3.8.1.6 from EC), a Pseudomonas enzyme which catalyses the conversion of 4-chlorobenzoate-CoA to 4-hydroxybenzoate-CoA []. Dienoyl-CoA isomerise, which catalyses the isomerisation of 3-trans,5-cis-dienoyl-CoA to 2-trans,4-trans-dienoyl-CoA []. Naphthoate synthase (MenB, or DHNA synthetase; 4.1.3.36 from EC), a bacterial enzyme involved in the biosynthesis of menaquinone (vitamin K2) []. Carnitine racemase (gene caiD), which catalyses the reversible conversion of crotonobetaine to L-carnitine in Escherichia coli []. Methylmalonyl CoA decarboxylase (MMCD; 4.1.1.41 from EC), which has a hexameric structure (dimer of trimers) []. Carboxymethylproline synthase (CarB), which is involved in carbapenem biosynthesis []. 6-oxo camphor hydrolase, which catalyses the desymmetrisation of bicyclic beta-diketones to optically active keto acids []. The alpha subunit of fatty oxidation complex, a multi-enzyme complex that catalyses the last three reactions in the fatty acid beta-oxidation cycle []. AUH protein, a bifunctional RNA-binding homologue of enoyl-CoA hydratase []. This entry represents the core domain found in crotonase superfamily members.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2VRE_B 3RSI_A 1HZD_F 2ZQR_E 2ZQQ_D 3R9S_C 1O8U_E 1SZO_C 3MOY_A 2UZF_A ....
Probab=100.00 E-value=5.9e-44 Score=327.69 Aligned_cols=219 Identities=29% Similarity=0.496 Sum_probs=203.5
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGIT 80 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a 80 (338)
|+.+|.++|+.++.|+++++||++|.|++||+|+|++++... ..+....+...++.++.++..+||||||+|||+|
T Consensus 26 ~~~~l~~~l~~~~~d~~v~vvv~~~~~~~F~~G~Dl~~~~~~----~~~~~~~~~~~~~~l~~~l~~~~kp~Iaav~G~a 101 (245)
T PF00378_consen 26 MLDELEEALDEAEADPDVKVVVISGGGKAFCAGADLKEFLNS----DEEEAREFFRRFQELLSRLANFPKPTIAAVNGHA 101 (245)
T ss_dssp HHHHHHHHHHHHHHSTTESEEEEEESTSESBESB-HHHHHHH----HHHHHHHHHHHHHHHHHHHHHSSSEEEEEESSEE
T ss_pred HHHHHHHHHHHHHhcCCccEEEEeecccccccccchhhhhcc----ccccccccchhhccccccchhhhhheeecccccc
Confidence 578999999999999999999999999999999999998764 3456677788899999999999999999999999
Q ss_pred ccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccCCCh
Q 019601 81 MGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLNGRL 159 (338)
Q Consensus 81 ~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l 159 (338)
+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. ++++++||+.++|+||+++|||++|+|++++
T Consensus 102 ~GgG~~lala~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~~a~~l~l~g~~~~a~eA~~~Glv~~v~~~~~l 181 (245)
T PF00378_consen 102 VGGGFELALACDFRIAAEDAKFGFPEVRLGIFPGAGGTFRLPRLIGPSRARELLLTGEPISAEEALELGLVDEVVPDEEL 181 (245)
T ss_dssp ETHHHHHHHHSSEEEEETTTEEETGGGGGTSSSTSTHHHHHHHHHHHHHHHHHHHHTCEEEHHHHHHTTSSSEEESGGGH
T ss_pred cccccccccccceEEeecccceeeeecccCcccccccccccceeeecccccccccccccchhHHHHhhcceeEEcCchhh
Confidence 999999999999999999999999999999999999999999999999 9999999999999999999999999999887
Q ss_pred hHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHHHh
Q 019601 160 PLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKE 239 (338)
Q Consensus 160 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~ 239 (338)
.+.. .+++++++.
T Consensus 182 ~~~a-------------------------------------------------------------------~~~a~~l~~ 194 (245)
T PF00378_consen 182 DEEA-------------------------------------------------------------------LELAKRLAA 194 (245)
T ss_dssp HHHH-------------------------------------------------------------------HHHHHHHHT
T ss_pred hHHH-------------------------------------------------------------------HHHHHHHhc
Confidence 6432 256999999
Q ss_pred cCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCC
Q 019601 240 ASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDK 294 (338)
Q Consensus 240 ~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k 294 (338)
.+|.+++.+|+.+++.....+.+.++.+...+...+. ++|++||+++|+ ||
T Consensus 195 ~~~~a~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~e~~~~f~-eK 245 (245)
T PF00378_consen 195 KPPSALRATKKALNRALEQSLEEALEFEQDLFAECFK---SEDFQEGIAAFL-EK 245 (245)
T ss_dssp SCHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHT---SHHHHHHHHHHH-TT
T ss_pred CCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcC---CHHHHHHHHHHh-Cc
Confidence 9999999999999999888999999999999999886 999999999999 76
No 59
>PRK07854 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.3e-43 Score=325.01 Aligned_cols=214 Identities=21% Similarity=0.322 Sum_probs=189.9
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGIT 80 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a 80 (338)
|+.+|.+++++++.+ ++++|||||.|++||+|+|++.... ...+...+..++..+.++||||||+|||+|
T Consensus 28 ~~~~l~~al~~~~~~-~vr~vvl~g~g~~F~aG~Dl~~~~~---------~~~~~~~~~~~~~~l~~~~kP~Iaav~G~a 97 (243)
T PRK07854 28 LCEELREAVRKAVDE-SARAIVLTGQGTVFCAGADLSGDVY---------ADDFPDALIEMLHAIDAAPVPVIAAINGPA 97 (243)
T ss_pred HHHHHHHHHHHHhcC-CceEEEEECCCCceecccCCccchh---------HHHHHHHHHHHHHHHHhCCCCEEEEecCcc
Confidence 578999999999865 8999999999999999999985211 122344566788889999999999999999
Q ss_pred ccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccCCCh
Q 019601 81 MGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLNGRL 159 (338)
Q Consensus 81 ~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l 159 (338)
+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. ++++++||+.++|+||+++|||++|++ +
T Consensus 98 ~GgG~~lal~cD~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~~G~~~a~~l~ltg~~~~a~eA~~~Glv~~v~~---~ 174 (243)
T PRK07854 98 IGAGLQLAMACDLRVVAPEAYFQFPVAKYGIALDNWTIRRLSSLVGGGRARAMLLGAEKLTAEQALATGMANRIGT---L 174 (243)
T ss_pred cccHHHHHHhCCEEEEcCCCEEeccccccccCCCccHHHHHHHHhCHHHHHHHHHcCCCcCHHHHHHCCCcccccC---H
Confidence 999999999999999999999999999999999999999999999999 999999999999999999999999965 2
Q ss_pred hHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHHHh
Q 019601 160 PLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKE 239 (338)
Q Consensus 160 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~ 239 (338)
. .+ .+++++|++
T Consensus 175 ~---~a-----------------------------------------------------------------~~~a~~l~~ 186 (243)
T PRK07854 175 A---DA-----------------------------------------------------------------QAWAAEIAG 186 (243)
T ss_pred H---HH-----------------------------------------------------------------HHHHHHHHh
Confidence 2 11 256899999
Q ss_pred cCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCCCC
Q 019601 240 ASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDP 302 (338)
Q Consensus 240 ~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~~~ 302 (338)
.+|.++..+|++++.. ..++++++.|...+...+. ++|+++|+++|+ +| |+|.|++
T Consensus 187 ~~~~a~~~~K~~l~~~--~~~~~~~~~e~~~~~~~~~---~~d~~eg~~af~-~k-r~p~~~~ 242 (243)
T PRK07854 187 LAPLALQHAKRVLNDD--GAIEEAWPAHKELFDKAWA---SQDAIEAQVARI-EK-RPPKFQG 242 (243)
T ss_pred CCHHHHHHHHHHHHcc--CCHHHHHHHHHHHHHHHhc---CchHHHHHHHHh-CC-CCCCCCC
Confidence 9999999999999875 6789999999888887765 999999999999 88 8999975
No 60
>PRK06023 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.5e-43 Score=326.15 Aligned_cols=217 Identities=19% Similarity=0.276 Sum_probs=191.2
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGIT 80 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a 80 (338)
|+++|.++++.++.|+++++|||||.|++||+|+|++++..... . . ..+...+..++..+..++|||||+|||+|
T Consensus 34 ~~~~L~~~l~~~~~d~~vr~vVl~g~g~~FcaG~Dl~~~~~~~~-~-~---~~~~~~~~~~~~~l~~~~kPvIAav~G~a 108 (251)
T PRK06023 34 MYATMAKALKAADADDAIRAHVFLGTEGCFSAGNDMQDFLAAAM-G-G---TSFGSEILDFLIALAEAEKPIVSGVDGLA 108 (251)
T ss_pred HHHHHHHHHHHHhcCCCceEEEEECCCCCeecCcCHHHHhhccc-c-c---hhhHHHHHHHHHHHHhCCCCEEEEeCCce
Confidence 67899999999999999999999999999999999998753211 1 1 12234455778889999999999999999
Q ss_pred ccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccCCCh
Q 019601 81 MGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLNGRL 159 (338)
Q Consensus 81 ~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l 159 (338)
+|||++|+++||||||+++++|++||+++|++|++|+++++++++|.. ++++++||+.++|+||+++|||++|||.+++
T Consensus 109 ~GgG~~la~acD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~g~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l 188 (251)
T PRK06023 109 IGIGTTIHLHCDLTFASPRSLFRTPFVDLALVPEAGSSLLAPRLMGHQRAFALLALGEGFSAEAAQEAGLIWKIVDEEAV 188 (251)
T ss_pred ecHHHHHHHhCCEEEEeCCCEecCcccccCCCCCchHHHHHHHHHhHHHHHHHHHhCCCCCHHHHHHcCCcceeeCHHHH
Confidence 999999999999999999999999999999999999999999999999 9999999999999999999999999998877
Q ss_pred hHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHHHh
Q 019601 160 PLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKE 239 (338)
Q Consensus 160 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~ 239 (338)
.+.. .+++++|++
T Consensus 189 ~~~a-------------------------------------------------------------------~~~a~~l~~ 201 (251)
T PRK06023 189 EAET-------------------------------------------------------------------LKAAEELAA 201 (251)
T ss_pred HHHH-------------------------------------------------------------------HHHHHHHHh
Confidence 5322 257999999
Q ss_pred cCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCC
Q 019601 240 ASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDK 294 (338)
Q Consensus 240 ~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k 294 (338)
.+|.+++.+|++++... ..+.+.++.|...+...+. ++|+++|+++|+ +|
T Consensus 202 ~~~~a~~~~K~~l~~~~-~~l~~~~~~e~~~~~~~~~---~~~~~e~~~af~-e~ 251 (251)
T PRK06023 202 KPPQALQIARDLMRGPR-EDILARIDEEAKHFAARLK---SAEARAAFEAFM-RR 251 (251)
T ss_pred CCHHHHHHHHHHHHhch-hhHHHHHHHHHHHHHHHhC---CHHHHHHHHHHh-cC
Confidence 99999999999998764 4788888888888777765 999999999998 53
No 61
>PRK08259 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.8e-43 Score=326.24 Aligned_cols=221 Identities=20% Similarity=0.218 Sum_probs=189.3
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGIT 80 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a 80 (338)
|+.+|.++++.++.|+++++|||||.|++||+|+|++++.... . ...... ....+...+..+||||||+|||+|
T Consensus 31 ~~~~l~~~l~~~~~d~~vr~vvltg~g~~FcaG~Dl~~~~~~~--~--~~~~~~--~~~~~~~~~~~~~kPvIaav~G~a 104 (254)
T PRK08259 31 TAAALADAFRAFDADDAASVAVLWGAGGTFCAGADLKAVGTGR--G--NRLHPS--GDGPMGPSRMRLSKPVIAAVSGYA 104 (254)
T ss_pred HHHHHHHHHHHHhcCCCceEEEEECCCCCccCCcChHHHhccc--c--hhhhhh--hcchhhhHHhcCCCCEEEEECCEE
Confidence 5789999999999999999999999999999999999875321 1 111100 011112233479999999999999
Q ss_pred ccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccCCCh
Q 019601 81 MGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLNGRL 159 (338)
Q Consensus 81 ~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l 159 (338)
+|||++|+++||+||++++++|++||+++|++|.+|++++|++++|.. +++++++|+.++|+||+++||||+|||++++
T Consensus 105 ~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~~a~~lll~g~~~~a~eA~~~Glv~~vv~~~~l 184 (254)
T PRK08259 105 VAGGLELALWCDLRVAEEDAVFGVFCRRWGVPLIDGGTVRLPRLIGHSRAMDLILTGRPVDADEALAIGLANRVVPKGQA 184 (254)
T ss_pred EhHHHHHHHhCCEEEecCCCEecCcccccCCCCCccHHHHHHHHhCHHHHHHHHHcCCccCHHHHHHcCCCCEeeChhHH
Confidence 999999999999999999999999999999999999999999999999 9999999999999999999999999999887
Q ss_pred hHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHHHh
Q 019601 160 PLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKE 239 (338)
Q Consensus 160 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~ 239 (338)
.+.. .+++++|++
T Consensus 185 ~~~a-------------------------------------------------------------------~~~a~~la~ 197 (254)
T PRK08259 185 RAAA-------------------------------------------------------------------EELAAELAA 197 (254)
T ss_pred HHHH-------------------------------------------------------------------HHHHHHHHh
Confidence 5422 256999999
Q ss_pred cCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCCC
Q 019601 240 ASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPK 299 (338)
Q Consensus 240 ~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~ 299 (338)
.+|.+++.+|++++.....++.++++.|...+...+ .+|++||+++|+ +|+++|.
T Consensus 198 ~~~~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~----~~d~~egi~af~-~~~~~~~ 252 (254)
T PRK08259 198 FPQTCLRADRLSALEQWGLPEEAALANEFAHGLAVL----AAEALEGAARFA-AGAGRHG 252 (254)
T ss_pred CCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHH----hhHHHHHHHHHH-hhhcccC
Confidence 999999999999998878899999999988776665 499999999999 6647663
No 62
>PRK05870 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=3.1e-43 Score=323.74 Aligned_cols=215 Identities=21% Similarity=0.309 Sum_probs=191.2
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGIT 80 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a 80 (338)
|+.+|.++++.++.|+++++|||||.|++||+|+|++++.... . .........+..++..+..+||||||+|||+|
T Consensus 31 ~~~~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~-~---~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a 106 (249)
T PRK05870 31 MSAQLRAAVAAAEADPDVHALVVTGAGKAFCAGADLTALGAAP-G---RPAEDGLRRIYDGFLAVASCPLPTIAAVNGAA 106 (249)
T ss_pred HHHHHHHHHHHHhcCCCeeEEEEECCCCCeecCcChHHHhccc-c---cchHHHHHHHHHHHHHHHhCCCCEEEEECCEe
Confidence 5789999999999999999999999999999999999875421 1 11123345556677789999999999999999
Q ss_pred ccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccCCCh
Q 019601 81 MGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLNGRL 159 (338)
Q Consensus 81 ~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l 159 (338)
+|||++|+++||+||++++++|++||+++|++|++|+++++++++|.. ++++++||+.++|+||+++|||+++| +++
T Consensus 107 ~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~~G~~~a~~l~ltg~~~~a~eA~~~Glv~~vv--~~l 184 (249)
T PRK05870 107 VGAGLNLALAADVRIAGPKALFDARFQKLGLHPGGGATWMLQRAVGPQVARAALLFGMRFDAEAAVRHGLALMVA--DDP 184 (249)
T ss_pred EchhHHHHHhCCEEEEcCCCEEeCcccccCcCCCCcceeeHHhhhCHHHHHHHHHhCCccCHHHHHHcCCHHHHH--hhH
Confidence 999999999999999999999999999999999999999999999999 99999999999999999999999999 455
Q ss_pred hHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHHHh
Q 019601 160 PLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKE 239 (338)
Q Consensus 160 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~ 239 (338)
.+.. .+++++|++
T Consensus 185 ~~~a-------------------------------------------------------------------~~~a~~la~ 197 (249)
T PRK05870 185 VAAA-------------------------------------------------------------------LELAAGPAA 197 (249)
T ss_pred HHHH-------------------------------------------------------------------HHHHHHHHh
Confidence 4321 267999999
Q ss_pred cCchHHHHHHHHHHhhcc-CCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhh
Q 019601 240 ASPLSLKVTLQSIREGRF-QSLDQCLVREYRITLNGISKKVSNDFCEGIRARL 291 (338)
Q Consensus 240 ~sp~al~~~k~~l~~~~~-~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl 291 (338)
.+|.+++.+|++++.... .+++++++.|...+...+. ++|++||+++|+
T Consensus 198 ~~~~a~~~~K~~~~~~~~~~~l~~~~~~e~~~~~~~~~---~~d~~eg~~af~ 247 (249)
T PRK05870 198 APRELVLATKASMRATASLAQHAAAVEFELGPQAASVQ---SPEFAARLAAAQ 247 (249)
T ss_pred CCHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHhc---ChhHHHHHHHHh
Confidence 999999999999998887 7899999999998888775 999999999998
No 63
>PLN03214 probable enoyl-CoA hydratase/isomerase; Provisional
Probab=100.00 E-value=2.7e-43 Score=328.82 Aligned_cols=221 Identities=18% Similarity=0.208 Sum_probs=193.8
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCC--CCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAG--RAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDG 78 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g--~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G 78 (338)
|+.+|.+++++++.|+++++|||||.| ++||+|+|++++.... ...+....+......++.++..++|||||+|||
T Consensus 39 ~~~eL~~al~~~~~d~~vr~vVltg~g~~~~FcaG~Dl~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G 116 (278)
T PLN03214 39 MWRSLDDALTALENDPTVRGVVFASGLRRDVFTAGNDIAELYAPK--TSAARYAEFWLTQTTFLVRLLRSRLATVCAIRG 116 (278)
T ss_pred HHHHHHHHHHHHHcCCCceEEEEeCCCCCCcccCccCHHHHhccc--cchHHHHHHHHHHHHHHHHHHcCCCCEEEEEcC
Confidence 578999999999999999999999998 6999999999875311 111222333344456778899999999999999
Q ss_pred ccccchhhhhhcCCeEEEeCceeEecCCCCcCc-CCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccC
Q 019601 79 ITMGCGAGISLQGMYRVVTDKTVFSNPETQMGF-HPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLN 156 (338)
Q Consensus 79 ~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl-~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~ 156 (338)
+|+|||++|+++|||||++++++|++||+++|+ +|++|+++++++++|.. ++++++||+.++|+||+++|||++|||.
T Consensus 117 ~a~GgG~~lalacD~ria~~~a~f~~pe~~lGl~~p~~~~~~~l~~~~G~~~a~~llltg~~~~a~eA~~~Glv~~vv~~ 196 (278)
T PLN03214 117 ACPAGGCAVSLCCDYRLQTTEGTMGLNEVALGIPVPKFWARLFMGRVIDRKVAESLLLRGRLVRPAEAKQLGLIDEVVPA 196 (278)
T ss_pred cccchHHHHHHhCCEEEecCCCEecCcHHHhCCCCCChhHHHHHHHhcCHHHHHHHHHcCCccCHHHHHHcCCCcEecCh
Confidence 999999999999999999999999999999999 59999999999999999 9999999999999999999999999998
Q ss_pred CChhHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHH
Q 019601 157 GRLPLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEK 236 (338)
Q Consensus 157 ~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~ 236 (338)
+++.+. +.+++++
T Consensus 197 ~~l~~~-------------------------------------------------------------------a~~~a~~ 209 (278)
T PLN03214 197 AALMEA-------------------------------------------------------------------AASAMER 209 (278)
T ss_pred HHHHHH-------------------------------------------------------------------HHHHHHH
Confidence 776532 2357999
Q ss_pred HHhcCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCC
Q 019601 237 LKEASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDK 294 (338)
Q Consensus 237 i~~~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k 294 (338)
|++.+|.+++.+|++++.....+++++++.|...+...+. ++|++||+++|+ +|
T Consensus 210 l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---s~d~~egi~afl-ek 263 (278)
T PLN03214 210 ALKLPSAARAATKALLREEFSAAWEAYYEEEAKGGWKMLS---EPSIIKALGGVM-ER 263 (278)
T ss_pred HHcCCHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhC---CHHHHHHHHHHH-HH
Confidence 9999999999999999988888899999999888877765 999999999999 65
No 64
>PLN02921 naphthoate synthase
Probab=100.00 E-value=7.5e-43 Score=331.76 Aligned_cols=226 Identities=19% Similarity=0.236 Sum_probs=189.0
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCC-CCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAG-RAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGI 79 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~ 79 (338)
|+.+|.++++.++.|+++++|||+|.| ++||+|+|++.+.... ....+....+ ....++..|..++|||||+|||+
T Consensus 95 ~~~eL~~al~~~~~d~~vrvVVLtg~G~k~FcaG~Dl~~~~~~~-~~~~~~~~~~--~~~~l~~~l~~~~kPvIAaVnG~ 171 (327)
T PLN02921 95 TVKELQRAFNDARDDSSVGVIILTGKGTKAFCSGGDQAVRGKDG-YVGPDDAGRL--NVLDLQIQIRRLPKPVIAMVAGY 171 (327)
T ss_pred HHHHHHHHHHHHhhCCCceEEEEecCCCCceecCcChhhhhccc-ccchhHHHHH--HHHHHHHHHHhCCCCEEEEECCE
Confidence 578999999999999999999999999 8999999999864210 0111111111 12456778899999999999999
Q ss_pred cccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccCCC
Q 019601 80 TMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLNGR 158 (338)
Q Consensus 80 a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~ 158 (338)
|+|||++|+++||+|||+++++|++||+++|++|.+|++++|++++|.. +++++++|+.++|+||+++|||++|||.++
T Consensus 172 a~GGG~~LalacD~riA~~~A~f~~pe~~~Gl~p~~gg~~~L~rliG~~~A~ellltG~~~~A~eA~~~GLV~~vv~~~~ 251 (327)
T PLN02921 172 AVGGGHILHMVCDLTIAADNAVFGQTGPKVGSFDAGYGSSIMARLVGQKKAREMWFLARFYTASEALKMGLVNTVVPLDE 251 (327)
T ss_pred EecHHHHHHHhCCEEEEeCCCEEeCcccccCCCCCccHHHHHHHHhCHHHHHHHHHcCCcCCHHHHHHCCCceEEeCHHH
Confidence 9999999999999999999999999999999999999999999999999 999999999999999999999999999887
Q ss_pred hhHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHHH
Q 019601 159 LPLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLK 238 (338)
Q Consensus 159 l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~ 238 (338)
+.+.. .+++++|+
T Consensus 252 l~~~a-------------------------------------------------------------------~~~a~~la 264 (327)
T PLN02921 252 LEGET-------------------------------------------------------------------VKWCREIL 264 (327)
T ss_pred HHHHH-------------------------------------------------------------------HHHHHHHH
Confidence 75422 25699999
Q ss_pred hcCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCCCC
Q 019601 239 EASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDP 302 (338)
Q Consensus 239 ~~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~~~ 302 (338)
+++|.+++.+|++++..... .....+.+...+...+. ++|++||+++|+ +| |+|.|+.
T Consensus 265 ~~~p~al~~~K~~l~~~~~~-~~~~~~~~~~~~~~~~~---s~d~~egi~Af~-ek-r~p~f~~ 322 (327)
T PLN02921 265 RNSPTAIRVLKSALNAADDG-HAGLQELGGNATLLFYG---SEEGNEGRTAYL-EG-RAPDFSK 322 (327)
T ss_pred ccCHHHHHHHHHHHHHhhcc-hhHHHHHHHHHHHHHhc---CHHHHHHHHHHh-cc-CCCCCCC
Confidence 99999999999999877553 33333333355555553 999999999999 98 8999975
No 65
>PRK08321 naphthoate synthase; Validated
Probab=100.00 E-value=1.9e-42 Score=326.70 Aligned_cols=230 Identities=20% Similarity=0.237 Sum_probs=190.7
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCC-------CCccccCChHHHHHHh---ccCCh-h--hHHHH-HHHHHHHHHHHh
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAG-------RAFCSGGDVIALYQLL---NEGKF-E--DFKNF-FETLYQFVYLQG 66 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g-------~~F~aG~Dl~~~~~~~---~~~~~-~--~~~~~-~~~~~~~~~~i~ 66 (338)
|+.+|.++++.++.|+++++|||||.| ++||+|+|++++.... ..... . ..... ...+..+...+.
T Consensus 53 ~~~~l~~al~~~~~d~~vrvvVltg~g~~~~~~~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 132 (302)
T PRK08321 53 TVDELYRALDHARMSPDVGCVLLTGNGPSPKDGGWAFCSGGDQRIRGRDGYQYAEGDEADTVDPARAGRLHILEVQRLIR 132 (302)
T ss_pred HHHHHHHHHHHHhhCCCcEEEEEeCCCCCCCCCCCeeecCcChhhhccccccccccccccchhhhHHHHHHHHHHHHHHH
Confidence 578999999999999999999999998 5999999999763210 00000 0 00011 111234667788
Q ss_pred hCCCCEEEEEccccccchhhhhhcCCeEEEe-CceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHH
Q 019601 67 TFVKPHVAILDGITMGCGAGISLQGMYRVVT-DKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEM 144 (338)
Q Consensus 67 ~~~kP~Iaav~G~a~GgG~~lala~D~ria~-~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA 144 (338)
.+||||||+|||+|+|||++|+++||+|||+ ++++|++||+++|++|+++++++|++++|.. ++++++||+.++|+||
T Consensus 133 ~~pkP~IAaV~G~a~GgG~~lalacD~ria~~~~a~f~~pe~~~Gl~p~~~~~~~L~r~vG~~~A~~l~ltG~~~~A~eA 212 (302)
T PRK08321 133 FMPKVVIAVVPGWAAGGGHSLHVVCDLTLASREHARFKQTDADVGSFDGGYGSAYLARQVGQKFAREIFFLGRTYSAEEA 212 (302)
T ss_pred cCCCCEEEEEcCeeehHHHHHHHhCCEEEEecCCCEEECCccccccCCCchHHHHHHHHhCHHHHHHHHHcCCccCHHHH
Confidence 9999999999999999999999999999999 6999999999999999999999999999999 9999999999999999
Q ss_pred HHcCccceeccCCChhHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcc
Q 019601 145 IACGLATHYTLNGRLPLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAAS 224 (338)
Q Consensus 145 ~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~ 224 (338)
+++|||+++||++++.+..
T Consensus 213 ~~~GLv~~vv~~~~l~~~a------------------------------------------------------------- 231 (302)
T PRK08321 213 HDMGAVNAVVPHAELETEA------------------------------------------------------------- 231 (302)
T ss_pred HHCCCceEeeCHHHHHHHH-------------------------------------------------------------
Confidence 9999999999988775422
Q ss_pred cccHHHHHHHHHHHhcCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCCCCC
Q 019601 225 SYDVWCRKAVEKLKEASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDPP 303 (338)
Q Consensus 225 ~~~~~a~~~a~~i~~~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~~~~ 303 (338)
.+++++|++.+|.+++.+|++++.... ........|...+..++. ++|+++|+.+|+ +| |+|.|+..
T Consensus 232 ------~~~a~~la~~~~~a~~~~K~~l~~~~~-~~~~~~~~e~~~~~~~~~---~~d~~egi~af~-ek-r~p~~~~~ 298 (302)
T PRK08321 232 ------LEWAREINGKSPTAMRMLKYAFNLTDD-GLVGQQLFAGEATRLAYM---TDEAQEGRDAFL-EK-RDPDWSDF 298 (302)
T ss_pred ------HHHHHHHHhCCHHHHHHHHHHHHhhhc-ccHHHHHHHHHHHHHHhc---CHHHHHHHHHHh-cc-CCCCCCCC
Confidence 257999999999999999999987655 344445567777777664 999999999999 88 89999753
No 66
>PRK12478 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=6.5e-43 Score=329.19 Aligned_cols=230 Identities=20% Similarity=0.209 Sum_probs=189.2
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHH-HHH---Hh-ccCChhhHHHH---HH---HHHHHHHHHhhCC
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIA-LYQ---LL-NEGKFEDFKNF---FE---TLYQFVYLQGTFV 69 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~-~~~---~~-~~~~~~~~~~~---~~---~~~~~~~~i~~~~ 69 (338)
|+.+|.++++.++.|++||+|||||.|++||+|+|+++ +.. .. .....+....+ .. .....+..+..++
T Consensus 33 ~~~eL~~al~~~~~d~~vrvvVLtG~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 112 (298)
T PRK12478 33 MPDEIEAAIGLAERDQDIKVIVLRGAGRAFSGGYDFGGGFQHWGEAMMTDGRWDPGKDFAMVTARETGPTQKFMAIWRAS 112 (298)
T ss_pred HHHHHHHHHHHHhcCCCceEEEEECCCCCcccCcCccccccccchhcccccccCchhhhhhhhhhhcchHHHHHHHHhCC
Confidence 57899999999999999999999999999999999986 211 00 00000111111 01 1123566788999
Q ss_pred CCEEEEEccccccchhhhhhcCCeEEEeCceeEecCCCCc-CcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHc
Q 019601 70 KPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQM-GFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIAC 147 (338)
Q Consensus 70 kP~Iaav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~~-Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~ 147 (338)
|||||+|||+|+|||++|+++||+|||+++++|++||+++ |+++ ++.+ .+++|.. ++++++||+.++|+||+++
T Consensus 113 kPvIAaV~G~a~GgG~~LalacD~ria~~~A~f~~pe~~l~G~~~--~~~~--~~~vG~~~A~~llltg~~i~A~eA~~~ 188 (298)
T PRK12478 113 KPVIAQVHGWCVGGASDYALCADIVIASDDAVIGTPYSRMWGAYL--TGMW--LYRLSLAKVKWHSLTGRPLTGVQAAEA 188 (298)
T ss_pred CCEEEEEccEEehhHHHHHHHCCEEEEcCCcEEeccccccccCCc--hhHH--HHHhhHHHHHHHHHcCCccCHHHHHHc
Confidence 9999999999999999999999999999999999999997 8875 3333 3569999 9999999999999999999
Q ss_pred CccceeccCCChhHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhccccc
Q 019601 148 GLATHYTLNGRLPLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYD 227 (338)
Q Consensus 148 GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~ 227 (338)
||||+|||++++.+..
T Consensus 189 GLV~~vv~~~~l~~~a---------------------------------------------------------------- 204 (298)
T PRK12478 189 ELINEAVPFERLEARV---------------------------------------------------------------- 204 (298)
T ss_pred CCcceecCHHHHHHHH----------------------------------------------------------------
Confidence 9999999998876432
Q ss_pred HHHHHHHHHHHhcCchHHHHHHHHHHhhcc-CCHHHHHHHHHHHHHHhcccCCCCcHH--------hhHhhhhcCCCCCC
Q 019601 228 VWCRKAVEKLKEASPLSLKVTLQSIREGRF-QSLDQCLVREYRITLNGISKKVSNDFC--------EGIRARLVDKDFAP 298 (338)
Q Consensus 228 ~~a~~~a~~i~~~sp~al~~~k~~l~~~~~-~~~~~~l~~e~~~~~~~~~~~~~~d~~--------egi~~fl~~k~r~p 298 (338)
.+++++|+..||.+++.+|++++.... .++.++++.|...+..++. ++|++ ||+++|+ +| |+|
T Consensus 205 ---~~~a~~la~~~p~a~~~~K~~l~~~~~~~~l~~~~~~e~~~~~~~~~---s~d~~e~~~~~~~egv~Af~-ek-R~p 276 (298)
T PRK12478 205 ---AEVATELARIPLSQLQAQKLIVNQAYENMGLASTQTLGGILDGLMRN---TPDALEFIRTAETQGVRAAV-ER-RDG 276 (298)
T ss_pred ---HHHHHHHHhCCHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhc---ChhHHHHHHHHHHHHHHHHH-Hh-cCC
Confidence 256999999999999999999998766 4699999999999888775 89997 5999999 99 999
Q ss_pred CCCCCCCC
Q 019601 299 KWDPPSLA 306 (338)
Q Consensus 299 ~~~~~~~~ 306 (338)
.|+..+..
T Consensus 277 ~f~~~~~~ 284 (298)
T PRK12478 277 PFGDYSQA 284 (298)
T ss_pred cccccCcC
Confidence 99876554
No 67
>PRK07112 polyketide biosynthesis enoyl-CoA hydratase; Validated
Probab=100.00 E-value=3.7e-42 Score=317.68 Aligned_cols=222 Identities=15% Similarity=0.160 Sum_probs=189.6
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGIT 80 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a 80 (338)
|+.+|.++++.++ +++++|||||.|++||+|+|++++.... .. ..........+..++.++..++|||||+|||+|
T Consensus 32 ~~~~L~~~l~~~~--~~vr~vVl~g~g~~FsaG~Dl~~~~~~~-~~-~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a 107 (255)
T PRK07112 32 LIAECMDVLDRCE--HAATIVVLEGLPEVFCFGADFSAIAEKP-DA-GRADLIDAEPLYDLWHRLATGPYVTIAHVRGKV 107 (255)
T ss_pred HHHHHHHHHHHhh--cCceEEEEEcCCCCcccCcCHHHHhhcc-cc-chhhhhhHHHHHHHHHHHHcCCCCEEEEEecEE
Confidence 5789999999998 3699999999999999999999875321 11 111111234456788889999999999999999
Q ss_pred ccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccCCCh
Q 019601 81 MGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLNGRL 159 (338)
Q Consensus 81 ~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l 159 (338)
+|||++|+++||+||++++++|++||+++|++|+++ +.+|++++|.. +++++++|+.++|+||+++|||+++||+++.
T Consensus 108 ~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~~-~~~l~~~vg~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~~ 186 (255)
T PRK07112 108 NAGGIGFVAASDIVIADETAPFSLSELLFGLIPACV-LPFLIRRIGTQKAHYMTLMTQPVTAQQAFSWGLVDAYGANSDT 186 (255)
T ss_pred EcchhHHHHcCCEEEEcCCCEEeCchhhhccCcchh-hHHHHHHhCHHHHHHHHHhCCcccHHHHHHcCCCceecCcHHH
Confidence 999999999999999999999999999999999865 45799999999 9999999999999999999999999987542
Q ss_pred hHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHHHh
Q 019601 160 PLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKE 239 (338)
Q Consensus 160 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~ 239 (338)
. . .++++++++
T Consensus 187 ~--~-------------------------------------------------------------------~~~a~~l~~ 197 (255)
T PRK07112 187 L--L-------------------------------------------------------------------RKHLLRLRC 197 (255)
T ss_pred H--H-------------------------------------------------------------------HHHHHHHHh
Confidence 1 1 156899999
Q ss_pred cCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCCCC
Q 019601 240 ASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDP 302 (338)
Q Consensus 240 ~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~~~ 302 (338)
.+|.+++.+|++++.. ...+.+.++.|.......+. ++|+++|+++|+ +| |+|.|+.
T Consensus 198 ~~p~a~~~~K~~~~~~-~~~~~~~~~~e~~~~~~~~~---~~~~~eg~~af~-~k-r~p~~~~ 254 (255)
T PRK07112 198 LNKAAVARYKSYASTL-DDTVAAARPAALAANIEMFA---DPENLRKIARYV-ET-GKFPWEA 254 (255)
T ss_pred CCHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHc---ChHHHHHHHHHH-cC-CCCCCCC
Confidence 9999999999999865 55788999999888877765 999999999999 88 8999974
No 68
>PRK07110 polyketide biosynthesis enoyl-CoA hydratase; Validated
Probab=100.00 E-value=9e-42 Score=314.04 Aligned_cols=214 Identities=19% Similarity=0.287 Sum_probs=191.3
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGIT 80 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a 80 (338)
|+.+|.+++++++.|+++|+|||||.|++||+|+|++++.... .+ + ..+ .. ..++..+.++||||||+|||+|
T Consensus 33 ~~~~L~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~-~~--~--~~~-~~-~~~~~~l~~~~kPvIaav~G~a 105 (249)
T PRK07110 33 LCDQLHEAFDTIAQDPRYKVVILTGYPNYFATGGTQEGLLSLQ-TG--K--GTF-TE-ANLYSLALNCPIPVIAAMQGHA 105 (249)
T ss_pred HHHHHHHHHHHHHhCCCceEEEEECCCCCeeCCcChHHHhhcc-ch--h--hhH-hh-HHHHHHHHcCCCCEEEEecCce
Confidence 5789999999999999999999999999999999999875321 11 1 112 22 5678889999999999999999
Q ss_pred ccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccCCCh
Q 019601 81 MGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLNGRL 159 (338)
Q Consensus 81 ~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l 159 (338)
+|||++|+++||+||++++++|++||+++|++|++|+++++++++|.. ++++++||+.++++||+++|||++||+++++
T Consensus 106 ~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~g~~~a~~llltg~~~~a~eA~~~Glv~~vv~~~~l 185 (249)
T PRK07110 106 IGGGLVLGLYADIVVLSRESVYTANFMKYGFTPGMGATAILPEKLGLALGQEMLLTARYYRGAELKKRGVPFPVLPRAEV 185 (249)
T ss_pred echHHHHHHhCCEEEEeCCCEecCchhccCCCCCchHHHHHHHHhCHHHHHHHHHcCCccCHHHHHHcCCCeEEeChHHH
Confidence 999999999999999999999999999999999999999999999999 9999999999999999999999999998876
Q ss_pred hHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHHHh
Q 019601 160 PLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKE 239 (338)
Q Consensus 160 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~ 239 (338)
.+.. .++++++++
T Consensus 186 ~~~a-------------------------------------------------------------------~~~a~~la~ 198 (249)
T PRK07110 186 LEKA-------------------------------------------------------------------LELARSLAE 198 (249)
T ss_pred HHHH-------------------------------------------------------------------HHHHHHHHh
Confidence 5322 256899999
Q ss_pred cCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhh
Q 019601 240 ASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARL 291 (338)
Q Consensus 240 ~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl 291 (338)
.||.+++.+|+.++.....++.+.++.|...+...+. ++|++||+++.-
T Consensus 199 ~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---~~~~~egi~~~~ 247 (249)
T PRK07110 199 KPRHSLVLLKDHLVADRRRRLPEVIEQEVAMHEKTFH---QPEVKRRIESLY 247 (249)
T ss_pred CCHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHhC---CHhHHHHHHHhc
Confidence 9999999999999998888999999999999888875 999999998753
No 69
>TIGR03222 benzo_boxC benzoyl-CoA-dihydrodiol lyase. In the presence of O2, the benzoyl-CoA oxygenase/reductase BoxBA BoxAB converts benzoyl-CoA to 2,3-dihydro-2,3-dihydroxybenzoyl-CoA. Members of this family, BoxC, homologous to enoyl-CoA hydratases/isomerases, hydrolyze this compound to 3,4-dehydroadipyl-CoA semialdehyde + HCOOH.
Probab=100.00 E-value=4.1e-41 Score=337.06 Aligned_cols=228 Identities=13% Similarity=0.055 Sum_probs=199.5
Q ss_pred CHHHHHHHHHHHhc-CCCcEEEEEEeCCCC-ccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEE-c
Q 019601 1 MVGRLKRLYESWEE-NPDIGFVLMKGAGRA-FCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAIL-D 77 (338)
Q Consensus 1 m~~eL~~~l~~~~~-d~~v~~vVl~g~g~~-F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav-~ 77 (338)
|+.+|.+++.+++. |++||+|||||.|+. ||+|.|++... ..+.......+...+.++.+|..++|||||+| |
T Consensus 299 ~~~~L~~a~~~~~~~d~~vr~vVl~g~G~~~F~aG~Dl~~~~----~~~~~~~~~~~~~~~~~~~~l~~~~kpviAav~~ 374 (546)
T TIGR03222 299 LARELDDAILHLRTNELDIGLWVFRTQGDAELVLAADALLEA----HKDHWFVRETIGYLRRTLARLDVSSRSLFALIEP 374 (546)
T ss_pred HHHHHHHHHHHHhhCCCCeEEEEEEcCCCCceecCcCccccc----cccchhHHHHHHHHHHHHHHHHcCCCCEEEEECC
Confidence 57899999999984 599999999999987 99999998421 11111112233444567889999999999999 8
Q ss_pred cccccch-hhhhhcCCeEEE-------eCceeEecCCCCcCcCCCcchHHHHhhcc-chH-H--HHHhhhCCCCCHHHHH
Q 019601 78 GITMGCG-AGISLQGMYRVV-------TDKTVFSNPETQMGFHPDAGASFYLSHLP-GYL-G--EYLALTGEKLNGVEMI 145 (338)
Q Consensus 78 G~a~GgG-~~lala~D~ria-------~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~-g~~-a--~~l~ltG~~~~a~eA~ 145 (338)
|+|+||| ++|+++||+||+ +++++|++||+++|++|++|++++|++++ |.. + +++++||+.++|+||+
T Consensus 375 G~a~GgG~~eLalacD~~ia~~~~~~~~~~a~f~~~e~~lGl~p~~gg~~~L~~~v~G~~~a~~~~~~ltg~~i~A~eA~ 454 (546)
T TIGR03222 375 GSCFAGTLAELAFAADRSYMLAFPDNNDPEPAITLSELNFGLYPMVNGLSRLATRFYAEPAPVAAVRDKIGQALDAEEAE 454 (546)
T ss_pred CeEeHHHHHHHHHhCceeeecCCCCCCCCCCEEeCCccccccCCCcCcHHHHHHHhcCchhHHHHHHHHhCCCCCHHHHH
Confidence 9999999 999999999999 89999999999999999999999999998 988 8 6699999999999999
Q ss_pred HcCccceeccCCChhHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhccc
Q 019601 146 ACGLATHYTLNGRLPLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASS 225 (338)
Q Consensus 146 ~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~ 225 (338)
++|||+++||++++.+..
T Consensus 455 ~~Glv~~vv~~~~l~~~a-------------------------------------------------------------- 472 (546)
T TIGR03222 455 RLGLVTAAPDDIDWEDEI-------------------------------------------------------------- 472 (546)
T ss_pred HcCCcccccCchHHHHHH--------------------------------------------------------------
Confidence 999999999998876422
Q ss_pred ccHHHHHHHHHHHhcCchHHHHHHHHHHhhccCCHHHH-HHHHHHHHHHhcccCCCCcHHh---hHhhhhcCCCCCCCCC
Q 019601 226 YDVWCRKAVEKLKEASPLSLKVTLQSIREGRFQSLDQC-LVREYRITLNGISKKVSNDFCE---GIRARLVDKDFAPKWD 301 (338)
Q Consensus 226 ~~~~a~~~a~~i~~~sp~al~~~k~~l~~~~~~~~~~~-l~~e~~~~~~~~~~~~~~d~~e---gi~~fl~~k~r~p~~~ 301 (338)
.+++++|+.+||.+++.+|++++.....+++.+ +..|...+..++. ++|.+| |+++|+ +| |+|+|+
T Consensus 473 -----~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~~e~~~~~~~~~---~~d~~e~~~g~~af~-ek-r~p~f~ 542 (546)
T TIGR03222 473 -----RIALEERASFSPDALTGLEANLRFAGPETMETRIFGRLTAWQNWIFN---RPNAVGENGALKVYG-SG-KKAQFD 542 (546)
T ss_pred -----HHHHHHHHhcCHHHHHHHHHHHhhcCCcChhhhHHHHHHHHHHHHhc---CCcccchhhHHHHHc-cC-CCCCCC
Confidence 256999999999999999999999999999999 9999999988876 999999 999999 99 999998
Q ss_pred CCC
Q 019601 302 PPS 304 (338)
Q Consensus 302 ~~~ 304 (338)
-.+
T Consensus 543 ~~~ 545 (546)
T TIGR03222 543 MER 545 (546)
T ss_pred ccC
Confidence 654
No 70
>PRK08184 benzoyl-CoA-dihydrodiol lyase; Provisional
Probab=100.00 E-value=3.7e-41 Score=338.36 Aligned_cols=229 Identities=14% Similarity=0.047 Sum_probs=200.1
Q ss_pred CHHHHHHHHHHHhc-CCCcEEEEEEeCC-CCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEc-
Q 019601 1 MVGRLKRLYESWEE-NPDIGFVLMKGAG-RAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILD- 77 (338)
Q Consensus 1 m~~eL~~~l~~~~~-d~~v~~vVl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~- 77 (338)
|+.+|.+++++++. |+++|+|||||.| ++||+|+|++.... .+..........++.++.++..++|||||+||
T Consensus 303 ~~~eL~~al~~~~~~d~~vr~vVltg~G~~~F~aG~Dl~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~~ 378 (550)
T PRK08184 303 MARELDDAILHLRTNELDIGTWVLKTEGDAAAVLAADATLLAH----KDHWLVRETRGYLRRTLKRLDVTSRSLFALIEP 378 (550)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEEEcCCCCcEEeCCChhhhcc----cchHHHHHHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 57899999999986 7999999999999 59999999873211 11111122334456678899999999999997
Q ss_pred cccccch-hhhhhcCCeEEEe-------CceeEecCCCCcCcCCCcchHHHHhhc-cchH-HHHH--hhhCCCCCHHHHH
Q 019601 78 GITMGCG-AGISLQGMYRVVT-------DKTVFSNPETQMGFHPDAGASFYLSHL-PGYL-GEYL--ALTGEKLNGVEMI 145 (338)
Q Consensus 78 G~a~GgG-~~lala~D~ria~-------~~a~f~~pe~~~Gl~p~~g~~~~l~r~-~g~~-a~~l--~ltG~~~~a~eA~ 145 (338)
|+|+||| ++|+++||+|||+ ++++|++||+++|++|++|++++|+++ +|.. ++++ ++||+.++|+||+
T Consensus 379 G~a~GgG~~eLalacD~~ia~~~~~~~~~~a~f~~pe~~~Gl~p~~gg~~~L~r~~vG~~~A~~~~l~~tg~~i~A~eA~ 458 (550)
T PRK08184 379 GSCFAGTLAELALAADRSYMLALPDDNDPAPAITLSALNFGLYPMVNGLSRLARRFYGEPDPLAAVRAKIGQPLDADAAE 458 (550)
T ss_pred CceehhHHHHHHHHCChhhhcCCCCCCCCCCEEECccccccCCCCCCcHHHhHHHhcChHHHHHHHHHHhCCcCCHHHHH
Confidence 9999999 9999999999999 999999999999999999999999988 6999 9887 5899999999999
Q ss_pred HcCccceeccCCChhHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhccc
Q 019601 146 ACGLATHYTLNGRLPLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASS 225 (338)
Q Consensus 146 ~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~ 225 (338)
++||||++||++++.+...
T Consensus 459 ~~GLv~~vv~~~~l~~~a~------------------------------------------------------------- 477 (550)
T PRK08184 459 ELGLVTAAPDDIDWEDEVR------------------------------------------------------------- 477 (550)
T ss_pred HcCCcccccChHHHHHHHH-------------------------------------------------------------
Confidence 9999999999988764322
Q ss_pred ccHHHHHHHHHHHhcCchHHHHHHHHHHhhccCCHHHH-HHHHHHHHHHhcccCCCCcHHh---hHhhhhcCCCCCCCCC
Q 019601 226 YDVWCRKAVEKLKEASPLSLKVTLQSIREGRFQSLDQC-LVREYRITLNGISKKVSNDFCE---GIRARLVDKDFAPKWD 301 (338)
Q Consensus 226 ~~~~a~~~a~~i~~~sp~al~~~k~~l~~~~~~~~~~~-l~~e~~~~~~~~~~~~~~d~~e---gi~~fl~~k~r~p~~~ 301 (338)
+++++|+.+||.+++.+|++++.....+++++ +..|...+..++. ++|.+| |+++|+ +| |+|+|+
T Consensus 478 ------~~a~~ia~~~p~a~~~~K~~l~~~~~~~~~~~~~~~e~~~~~~~~~---~~d~~e~~~g~~af~-ek-r~~~f~ 546 (550)
T PRK08184 478 ------IALEERASLSPDALTGMEANLRFAGPETMETRIFGRLTAWQNWIFQ---RPNAVGEKGALKVYG-TG-QKAQFD 546 (550)
T ss_pred ------HHHHHHHhCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhc---CCcccccchHHHHhc-cC-CCCCCC
Confidence 56999999999999999999999999999999 9999999888875 999999 999999 99 999998
Q ss_pred CCCC
Q 019601 302 PPSL 305 (338)
Q Consensus 302 ~~~~ 305 (338)
+.++
T Consensus 547 ~~~~ 550 (550)
T PRK08184 547 WNRV 550 (550)
T ss_pred CCCC
Confidence 7653
No 71
>PRK06190 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=7.8e-41 Score=309.09 Aligned_cols=203 Identities=19% Similarity=0.248 Sum_probs=181.9
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGIT 80 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a 80 (338)
|+.+|.++++.++.|+++++|||||.|++||+|+|++++.... .+. .. ...++.++..+..+||||||+|||+|
T Consensus 32 ~~~~l~~~l~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~----~~~-~~-~~~~~~~~~~i~~~~kPvIAaV~G~a 105 (258)
T PRK06190 32 LRRALFAALAEADADDDVDVVVLTGADPAFCAGLDLKELGGDG----SAY-GA-QDALPNPSPAWPAMRKPVIGAINGAA 105 (258)
T ss_pred HHHHHHHHHHHHhhCCCceEEEEECCCCCccCCcCHHHHhccc----chh-hH-HHHHHHHHHHHHhCCCCEEEEECCEe
Confidence 5789999999999999999999999999999999999875311 111 11 23456778889999999999999999
Q ss_pred ccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccCCCh
Q 019601 81 MGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLNGRL 159 (338)
Q Consensus 81 ~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l 159 (338)
+|||++|+++||+|||+++++|++||+++|++|++|+++++++++|.. ++++++||+.++|+||+++|||+++||++++
T Consensus 106 ~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l 185 (258)
T PRK06190 106 VTGGLELALACDILIASERARFADTHARVGILPGWGLSVRLPQKVGIGRARRMSLTGDFLDAADALRAGLVTEVVPHDEL 185 (258)
T ss_pred ecHHHHHHHhCCEEEEeCCCEEECcccccCcCCCccHHHHHHHHhCHHHHHHHHHhCCccCHHHHHHcCCCeEecCHhHH
Confidence 999999999999999999999999999999999999999999999999 9999999999999999999999999998877
Q ss_pred hHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHHHh
Q 019601 160 PLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKE 239 (338)
Q Consensus 160 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~ 239 (338)
.+.. .+++++|++
T Consensus 186 ~~~a-------------------------------------------------------------------~~~a~~la~ 198 (258)
T PRK06190 186 LPRA-------------------------------------------------------------------RRLAASIAG 198 (258)
T ss_pred HHHH-------------------------------------------------------------------HHHHHHHHc
Confidence 5422 256999999
Q ss_pred cCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcc
Q 019601 240 ASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGIS 276 (338)
Q Consensus 240 ~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~ 276 (338)
++|.+++.+|++++.....++.+.++.|...+...+.
T Consensus 199 ~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~ 235 (258)
T PRK06190 199 NNPAAVRALKASYDDGAAAQTGDALALEAEAARAHNR 235 (258)
T ss_pred CCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHc
Confidence 9999999999999998888999999999999888875
No 72
>PRK05869 enoyl-CoA hydratase; Validated
Probab=100.00 E-value=7e-40 Score=296.40 Aligned_cols=186 Identities=19% Similarity=0.260 Sum_probs=165.6
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGIT 80 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a 80 (338)
|+.+|.+++++++.|+++++|||||.|++||+|+|++++.... ......+.+.+++++.++.++||||||+|||+|
T Consensus 35 ~~~~l~~~l~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~----~~~~~~~~~~~~~~~~~i~~~~kPvIAav~G~a 110 (222)
T PRK05869 35 VYREIVAAANELGRRDDVAAVILYGGHEIFSAGDDMPELRTLS----AQEADTAARVRQQAVDAVAAIPKPTVAAITGYA 110 (222)
T ss_pred HHHHHHHHHHHHhcCCCceEEEEECCCCCcCcCcCHHHHhccC----hhhHHHHHHHHHHHHHHHHhCCCCEEEEEcCEe
Confidence 5789999999999999999999999999999999999875321 122223345567788899999999999999999
Q ss_pred ccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccCCCh
Q 019601 81 MGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLNGRL 159 (338)
Q Consensus 81 ~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l 159 (338)
+|||++|+++||+||++++++|++||+++|++|++|+++++++++|.. ++++++||+.++|+||+++|||++++|++++
T Consensus 111 ~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~ig~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l 190 (222)
T PRK05869 111 LGAGLTLALAADWRVSGDNVKFGATEILAGLAPSGDGMARLTRAAGPSRAKELVFSGRFFDAEEALALGLIDEMVAPDDV 190 (222)
T ss_pred ecHHHHHHHhCCEEEecCCCEEcCchhccCCCCCccHHHHHHHHhCHHHHHHHHHcCCCcCHHHHHHCCCCCEeeCchHH
Confidence 999999999999999999999999999999999999999999999999 9999999999999999999999999998877
Q ss_pred hHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHHHh
Q 019601 160 PLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKE 239 (338)
Q Consensus 160 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~ 239 (338)
.+.. .+++++|+.
T Consensus 191 ~~~a-------------------------------------------------------------------~~~a~~ia~ 203 (222)
T PRK05869 191 YDAA-------------------------------------------------------------------AAWARRFLD 203 (222)
T ss_pred HHHH-------------------------------------------------------------------HHHHHHHHc
Confidence 5422 257999999
Q ss_pred cCchHHHHHHHHHHhhcc
Q 019601 240 ASPLSLKVTLQSIREGRF 257 (338)
Q Consensus 240 ~sp~al~~~k~~l~~~~~ 257 (338)
.+|.+++.+|+.++...+
T Consensus 204 ~~~~a~~~~K~~~~~~~~ 221 (222)
T PRK05869 204 GPPHALAAAKAGISDVYE 221 (222)
T ss_pred CCHHHHHHHHHHHHHHhh
Confidence 999999999999987643
No 73
>KOG1679 consensus Enoyl-CoA hydratase [Lipid transport and metabolism]
Probab=100.00 E-value=1.5e-40 Score=287.52 Aligned_cols=230 Identities=20% Similarity=0.291 Sum_probs=210.3
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCC-CCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAG-RAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGI 79 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~ 79 (338)
|+..|.++++.+..|+.+|+|+|.+.- ..||+|.||++-..+ ...++..|...+..++..|..+|.||||+|+|.
T Consensus 59 ~~~~l~~~l~~lk~D~~~RvvilrS~vpgvFCaGADLKER~~M----s~~Ev~~fV~~lR~~~~dIe~Lp~P~IAAidG~ 134 (291)
T KOG1679|consen 59 FVKQLREVLDELKYDNKVRVVILRSLVPGVFCAGADLKERKTM----SPSEVTRFVNGLRGLFNDIERLPQPVIAAIDGA 134 (291)
T ss_pred HHHHHHHHHHHHhhCCceeEEEEecCCCceeecCcchHhhhcC----CHHHHHHHHHHHHHHHHHHHhCCccceehhcch
Confidence 578999999999999999999999975 899999999998654 367888999999999999999999999999999
Q ss_pred cccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccCCC
Q 019601 80 TMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLNGR 158 (338)
Q Consensus 80 a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~ 158 (338)
++|||++|+++||+|+|+.+++|+++|.+++++|+.|++++|+|.+|.. ++++++||+.+++.||...||||++|...+
T Consensus 135 ALGGGLElALACDiRva~s~akmGLvET~laiiPGaGGtQRLpR~vg~alaKELIftarvl~g~eA~~lGlVnhvv~qne 214 (291)
T KOG1679|consen 135 ALGGGLELALACDIRVAASSAKMGLVETKLAIIPGAGGTQRLPRIVGVALAKELIFTARVLNGAEAAKLGLVNHVVEQNE 214 (291)
T ss_pred hcccchhhhhhccceehhhhccccccccceeeecCCCccchhHHHHhHHHHHhHhhhheeccchhHHhcchHHHHHhcCc
Confidence 9999999999999999999999999999999999999999999999999 999999999999999999999999997643
Q ss_pred h-hHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHH
Q 019601 159 L-PLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKL 237 (338)
Q Consensus 159 l-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i 237 (338)
- +... .-|.+++++|
T Consensus 215 egdaa~----------------------------------------------------------------~kal~lA~ei 230 (291)
T KOG1679|consen 215 EGDAAY----------------------------------------------------------------QKALELAREI 230 (291)
T ss_pred cccHHH----------------------------------------------------------------HHHHHHHHHh
Confidence 2 2111 1134789999
Q ss_pred HhcCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCCCCC
Q 019601 238 KEASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDPP 303 (338)
Q Consensus 238 ~~~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~~~~ 303 (338)
.-+.|.++++.|..++.+...++..++..|..-+.+.+. +.|..||+.+|- +| |+|.|++.
T Consensus 231 lp~gPiavr~aKlAIn~G~evdiasgl~iEe~CYaq~i~---t~drLeglaaf~-ek-r~p~y~G~ 291 (291)
T KOG1679|consen 231 LPQGPIAVRLAKLAINLGMEVDIASGLSIEEMCYAQIIP---TKDRLEGLAAFK-EK-RKPEYKGE 291 (291)
T ss_pred ccCCchhhhHHHHHhccCceecccccccHHHHHHHhcCc---HHHHHHHHHHHH-hh-cCCCcCCC
Confidence 999999999999999999999999999999998888875 899999999999 88 99998863
No 74
>PRK08788 enoyl-CoA hydratase; Validated
Probab=100.00 E-value=1.2e-38 Score=297.99 Aligned_cols=221 Identities=16% Similarity=0.185 Sum_probs=179.0
Q ss_pred CHHHHHHHHHHHhc-----CCCcEEEEEEeC-CCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHh---hCCCC
Q 019601 1 MVGRLKRLYESWEE-----NPDIGFVLMKGA-GRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQG---TFVKP 71 (338)
Q Consensus 1 m~~eL~~~l~~~~~-----d~~v~~vVl~g~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~---~~~kP 71 (338)
|+.+|.+++++++. |+++++|||||. |++||+|+|++++.......+.+....+.+.+...+..+. .+|||
T Consensus 44 ~~~eL~~al~~~~~~~~~~d~~vrvVVltg~~gk~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~pkP 123 (287)
T PRK08788 44 LLDDIMNLQRAIRQRLDDSGLPVDFWVLASDVPGVFNLGGDLALFAELIRAGDRDALLAYARACVDGVHAFHRGFGAGAI 123 (287)
T ss_pred HHHHHHHHHHHHHhhccCCCCCeEEEEEEcCCCCceEeCcCHHHHhhhccccchHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 57899999999998 899999999999 7999999999987532111111222222233333333333 79999
Q ss_pred EEEEEccccccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCcc
Q 019601 72 HVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLA 150 (338)
Q Consensus 72 ~Iaav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv 150 (338)
|||+|||+|+|||++|+++||+||++++++|++||+++|++|++|+++++++++|.. ++++++||+.++|+||+++|||
T Consensus 124 vIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pev~lGl~p~~g~~~~l~~~vG~~~A~ellltG~~l~A~eA~~~GLV 203 (287)
T PRK08788 124 SIALVQGDALGGGFEAALSHHTIIAERGAKMGFPEILFNLFPGMGAYSFLARRVGPKLAEELILSGKLYTAEELHDMGLV 203 (287)
T ss_pred EEEEECCeeehHHHHHHHhCCEEEecCCCEeeCchhhhCcCCCchHHHHHHHHhhHHHHHHHHHcCCCCCHHHHHHCCCC
Confidence 999999999999999999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred ceeccCCChhHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHH
Q 019601 151 THYTLNGRLPLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWC 230 (338)
Q Consensus 151 ~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a 230 (338)
+++||++++.+..
T Consensus 204 ~~vv~~~el~~~a------------------------------------------------------------------- 216 (287)
T PRK08788 204 DVLVEDGQGEAAV------------------------------------------------------------------- 216 (287)
T ss_pred cEecCchHHHHHH-------------------------------------------------------------------
Confidence 9999988775422
Q ss_pred HHHHHHHHhcCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhh
Q 019601 231 RKAVEKLKEASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARL 291 (338)
Q Consensus 231 ~~~a~~i~~~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl 291 (338)
.+++++|++. |.+...+|+..+.....++.+.++.|......+++ ..+.-++-+..|+
T Consensus 217 ~~~a~~ia~~-~~~~~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 274 (287)
T PRK08788 217 RTFIRKSKRK-LNGWRAMLRARRRVNPLSLEELMDITEIWVDAALQ--LEEKDLRTMERLV 274 (287)
T ss_pred HHHHHHHhcC-ccHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHhh--cccccHHHHHHHH
Confidence 2568888877 77777777777766667899999998887776554 1445567777777
No 75
>KOG1681 consensus Enoyl-CoA isomerase [Lipid transport and metabolism]
Probab=100.00 E-value=1e-39 Score=284.61 Aligned_cols=231 Identities=19% Similarity=0.296 Sum_probs=201.8
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhcc---CC-----hhhHHHHHHHHHHHHHHHhhCCCCE
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNE---GK-----FEDFKNFFETLYQFVYLQGTFVKPH 72 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~---~~-----~~~~~~~~~~~~~~~~~i~~~~kP~ 72 (338)
|+.|+.++++.+..||++|+|||+|+||.||+|+|+..+...... ++ -...++.+..+++.+..|..|||||
T Consensus 50 ~w~E~~~cf~~l~~dpdcr~iilsg~GKhFcaGIDl~~~~~~~~~~~~~dd~aR~g~~lrr~Ik~~Q~~~t~ie~CpKPV 129 (292)
T KOG1681|consen 50 FWREFKECFDSLDRDPDCRAIILSGAGKHFCAGIDLNDMASDRILQPEGDDVARKGRSLRRIIKRYQDTFTAIERCPKPV 129 (292)
T ss_pred HHHHHHHHHHhhccCCCceEEEEecCCcceecccCcchhhhhhccccccchHhhhhHHHHHHHHHHHHHHHHHHhCChhH
Confidence 688999999999999999999999999999999998776543211 11 1335667788899999999999999
Q ss_pred EEEEccccccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH--HHHHhhhCCCCCHHHHHHcCcc
Q 019601 73 VAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL--GEYLALTGEKLNGVEMIACGLA 150 (338)
Q Consensus 73 Iaav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~--a~~l~ltG~~~~a~eA~~~GLv 150 (338)
|++|||+|+|||+.|..+||+|+|+++|.|..-|+.+|+..+.|...+|+..+|.. ++++.+|++.|+|.||++.|||
T Consensus 130 IaavHg~CiGagvDLiTAcDIRycsqDAffsvkEVDvglaADvGTL~RlpkvVGn~s~~~elafTar~f~a~EAl~~GLv 209 (292)
T KOG1681|consen 130 IAAVHGACIGAGVDLITACDIRYCSQDAFFSVKEVDVGLAADVGTLNRLPKVVGNQSLARELAFTARKFSADEALDSGLV 209 (292)
T ss_pred HHHHHhhhccccccceeecceeeecccceeeeeeeeeehhhchhhHhhhhHHhcchHHHHHHHhhhhhcchhhhhhcCcc
Confidence 99999999999999999999999999999999999999999999999999999955 9999999999999999999999
Q ss_pred ceeccCCChhHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHH
Q 019601 151 THYTLNGRLPLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWC 230 (338)
Q Consensus 151 ~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a 230 (338)
++|+|+.+-. +...
T Consensus 210 Srvf~dk~~l-l~~~----------------------------------------------------------------- 223 (292)
T KOG1681|consen 210 SRVFPDKEEL-LNGA----------------------------------------------------------------- 223 (292)
T ss_pred hhhcCCHHHH-Hhhh-----------------------------------------------------------------
Confidence 9999984321 1222
Q ss_pred HHHHHHHHhcCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCCC
Q 019601 231 RKAVEKLKEASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWD 301 (338)
Q Consensus 231 ~~~a~~i~~~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~~ 301 (338)
..+|..|+.+||.+++.||+.+++..+.+.++.|..-..+...++. ++|+.+++.+-+ +|++++.|+
T Consensus 224 l~mA~~Ia~KSpvaVqgTK~~L~ysrehsv~~sLnyvatwNms~L~---s~Dl~~av~a~m-~k~k~~tfs 290 (292)
T KOG1681|consen 224 LPMAELIASKSPVAVQGTKENLLYSREHSVEESLNYVATWNMSMLL---SDDLVKAVMAQM-EKLKTVTFS 290 (292)
T ss_pred HHHHHHhccCCceeeechHHHHHHHhhhhhhhhHHHHHHHHHHHHH---HHHHHHHHHHHh-hcCCCCCcc
Confidence 2679999999999999999999999999999999998888877765 999999999999 663344465
No 76
>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=100.00 E-value=1.5e-38 Score=330.67 Aligned_cols=259 Identities=17% Similarity=0.219 Sum_probs=196.6
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGIT 80 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a 80 (338)
|+.+|.++++.++.|+++++|||||.|++||+|+|++++.... .........+.+.++.++.++..++|||||+|||+|
T Consensus 35 ~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~kPvIAav~G~a 113 (715)
T PRK11730 35 TLASLGEALDALEAQSDLKGLLLTSAKDAFIVGADITEFLSLF-AAPEEELSQWLHFANSIFNRLEDLPVPTVAAINGYA 113 (715)
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEECCCCccccCcCHHHHhhhc-cCCHHHHHHHHHHHHHHHHHHHcCCCCEEEEECCEe
Confidence 5789999999999999999999999999999999999875321 111223345566677888899999999999999999
Q ss_pred ccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccCCCh
Q 019601 81 MGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLNGRL 159 (338)
Q Consensus 81 ~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l 159 (338)
+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. ++++++||+.++|+||+++||||++||++++
T Consensus 114 ~GgG~~LAlacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~rlvG~~~A~~llltG~~~~A~eA~~~GLv~~vv~~~~l 193 (715)
T PRK11730 114 LGGGCECVLATDYRVASPDARIGLPETKLGIMPGFGGTVRLPRLIGADNALEWIAAGKDVRAEDALKVGAVDAVVAPEKL 193 (715)
T ss_pred ehHHHHHHHhCCEEEEcCCCEEeCchhhcCCCCCchHHHHHHHhcCHHHHHHHHHcCCcCCHHHHHHCCCCeEecCHHHH
Confidence 999999999999999999999999999999999999999999999999 9999999999999999999999999999887
Q ss_pred hHHHHHHhh-cccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHH-HHHH
Q 019601 160 PLVEERVGK-LITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKA-VEKL 237 (338)
Q Consensus 160 ~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~-a~~i 237 (338)
.+...++.+ +......... . .... ..+..+ +.+.+++ .+ ..+++. .++.
T Consensus 194 ~~~a~~~a~~la~~~~~~~~-~----~~~~-~~p~a~----~~~~~~~-------~~------------~~~k~~~~~~~ 244 (715)
T PRK11730 194 QEAALALLKQAIAGKLDWKA-R----RQPK-LEPLKL----SKIEAMM-------SF------------TTAKGMVAQKA 244 (715)
T ss_pred HHHHHHHHHHHhhcCCcccc-c----cCcc-cccccc----cchhHHH-------HH------------HHHHHHHHHhh
Confidence 654444421 1110000000 0 0000 000000 0000000 00 111121 2445
Q ss_pred HhcCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCC
Q 019601 238 KEASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDK 294 (338)
Q Consensus 238 ~~~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k 294 (338)
.++.|.++ .++++++.....+++++++.|.+.+..++. ++|+++|+++|+ ++
T Consensus 245 ~~~~pa~~-~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~---s~d~~egi~aF~-~~ 296 (715)
T PRK11730 245 GKHYPAPM-TAVKTIEAAAGLGRDEALELEAKGFVKLAK---TNVARALVGIFL-ND 296 (715)
T ss_pred ccCCccHH-HHHHHHHHHhcCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHH-HH
Confidence 55666666 678889988888999999999999999876 999999999999 54
No 77
>TIGR03200 dearomat_oah 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase. Members of this protein family are 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase, a ring-hydrolyzing enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=1e-37 Score=295.14 Aligned_cols=268 Identities=16% Similarity=0.249 Sum_probs=195.9
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCC-CCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAG-RAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGI 79 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~ 79 (338)
|+.+|.++++.++.|+++++|||||.| ++||+|+|++++..... ........+...++.++..+..++|||||+|||+
T Consensus 56 ml~eL~~al~~~~~D~dVrvVVLTG~G~kaFCAG~DLke~~~~~~-~~~~~~~~~~~~~~~l~~~i~~~pKPVIAAVnG~ 134 (360)
T TIGR03200 56 MVKAIILAFRRASSDRDVVAVVFTAVGDKAFCTGGNTKEYAEYYA-GNPQEYRQYMRLFNDMVSAILGCDKPVICRVNGM 134 (360)
T ss_pred HHHHHHHHHHHHhhCCCceEEEEEcCCCCcccCCcCHHHHhhhcc-cChhHHHHHHHHHHHHHHHHHhCCCCEEEEECCE
Confidence 678999999999999999999999999 79999999998754211 1122334555666778889999999999999999
Q ss_pred cccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccCCC
Q 019601 80 TMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLNGR 158 (338)
Q Consensus 80 a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~ 158 (338)
|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. ++++++||+.++|+||+++|||++|||+.+
T Consensus 135 AiGGGleLALaCDlrIAse~A~Fg~PE~rlGl~P~~Ggt~rLprlvG~~rA~~llltGe~~sA~EA~~~GLVd~VVp~~~ 214 (360)
T TIGR03200 135 RIGGGQEIGMAADFTIAQDLANFGQAGPKHGSAPIGGATDFLPLMIGCEQAMVSGTLCEPWSAHKAKRLGIIMDVVPALK 214 (360)
T ss_pred eeeHHHHHHHhCCEEEEcCCCEEeCchhccCCCCCccHHHHHHHhhCHHHHHHHHHhCCcCcHHHHHHcCChheecCchh
Confidence 9999999999999999999999999999999999999999999999999 999999999999999999999999999877
Q ss_pred hhHHHHHHhhcccCChHHHHHHHHHhccccCCChhH---HHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHH
Q 019601 159 LPLVEERVGKLITDDPSIIETSLAQYGDLVSLDRES---VLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVE 235 (338)
Q Consensus 159 l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~ 235 (338)
+.. .+ .+.+...-.+.+..|....+++... +...-+.+..+ ...+..+-+ -..+++.
T Consensus 215 ~~~---~~---~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~l~~------------~~~~l~~ 274 (360)
T TIGR03200 215 VDG---KF---VANPLVVTDRYLDEFGRIVHGEFKAGDELKAGKELIKQG--TIDLSLLDE------------AVEALCA 274 (360)
T ss_pred cCc---ch---hcCcccchHHHHHHHhHHhcCCCcchhHHHHHHHHHhcc--cchHhHHHH------------HHHHHHH
Confidence 631 11 0011001112222222211111111 11111111110 011111111 1225778
Q ss_pred HHHhcCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCC
Q 019601 236 KLKEASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDK 294 (338)
Q Consensus 236 ~i~~~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k 294 (338)
++....|..+.-+++-++......+.+.-...+..+.-.+ ..+..+|+++|- ++
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-~~ 328 (360)
T TIGR03200 275 KLLNTFPECLTKSIEELRKPKLFAWNQNKENSRAWLALNM----MNEARTGFRAFN-EG 328 (360)
T ss_pred HHHHhchHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHhhc----ccccchhhHHHh-cc
Confidence 8888899999999999988777677776666666655444 478899999998 63
No 78
>PRK08290 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.4e-38 Score=296.96 Aligned_cols=206 Identities=18% Similarity=0.271 Sum_probs=173.4
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhc-cC--------------Ch---hhHHHHHHHHHHHH
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLN-EG--------------KF---EDFKNFFETLYQFV 62 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~-~~--------------~~---~~~~~~~~~~~~~~ 62 (338)
|+.+|.+++++++.|+++++|||||.|++||+|+|++++..... .. .. .........+..++
T Consensus 32 ~~~eL~~~l~~~~~d~~vrvvVltg~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (288)
T PRK08290 32 MLYELDAAFRRAEADDAVRVIVLAGAGKHFSAGHDLGSGTPGRDRDPGPDQHPTLWWDGATKPGVEQRYAREWEVYLGMC 111 (288)
T ss_pred HHHHHHHHHHHHhcCCCeeEEEEECCCCccccCCCccccccccccccccccccccccccccccchhhHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999997632110 00 00 01111223445677
Q ss_pred HHHhhCCCCEEEEEccccccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCH
Q 019601 63 YLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNG 141 (338)
Q Consensus 63 ~~i~~~~kP~Iaav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a 141 (338)
..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|+ |+ ++.+++++++|.. ++++++||+.++|
T Consensus 112 ~~l~~~pkPvIAaVnG~a~GgG~~lalacD~ria~e~a~f~~pe~~lGl-~~-~~~~~l~~~iG~~~A~~llltG~~i~A 189 (288)
T PRK08290 112 RRWRDLPKPTIAQVQGACIAGGLMLAWVCDLIVASDDAFFSDPVVRMGI-PG-VEYFAHPWELGPRKAKELLFTGDRLTA 189 (288)
T ss_pred HHHHhCCCCEEEEECCEeeHHHHHHHHhCCEEEeeCCCEecCcccccCc-Cc-chHHHHHHHhhHHHHHHHHHcCCCCCH
Confidence 7899999999999999999999999999999999999999999999999 44 4567789999999 9999999999999
Q ss_pred HHHHHcCccceeccCCChhHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhh
Q 019601 142 VEMIACGLATHYTLNGRLPLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENE 221 (338)
Q Consensus 142 ~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~ 221 (338)
+||+++|||+++||++++.+..
T Consensus 190 ~eA~~~GLV~~vv~~~~l~~~a---------------------------------------------------------- 211 (288)
T PRK08290 190 DEAHRLGMVNRVVPRDELEAET---------------------------------------------------------- 211 (288)
T ss_pred HHHHHCCCccEeeCHHHHHHHH----------------------------------------------------------
Confidence 9999999999999987775422
Q ss_pred hcccccHHHHHHHHHHHhcCchHHHHHHHHHHhhccC-CHHHHHHHHHHHHHHhc
Q 019601 222 AASSYDVWCRKAVEKLKEASPLSLKVTLQSIREGRFQ-SLDQCLVREYRITLNGI 275 (338)
Q Consensus 222 ~~~~~~~~a~~~a~~i~~~sp~al~~~k~~l~~~~~~-~~~~~l~~e~~~~~~~~ 275 (338)
.+++++|++.+|.+++.+|++++...+. .++++++.|.......+
T Consensus 212 ---------~~~a~~la~~~~~a~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (288)
T PRK08290 212 ---------LELARRIAAMPPFGLRLTKRAVNQTLDAQGFRAALDAVFDLHQLGH 257 (288)
T ss_pred ---------HHHHHHHHhCCHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHcc
Confidence 2579999999999999999999988775 79999999888877665
No 79
>PRK06213 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.7e-38 Score=287.48 Aligned_cols=197 Identities=15% Similarity=0.108 Sum_probs=172.7
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGIT 80 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a 80 (338)
|+.+|.++++.++ +++++|||+|.|++||+|+|++++... .+....+...+.+++.++..+||||||+|||+|
T Consensus 30 ~~~~l~~~l~~~~--~~~~vvvl~g~g~~F~~G~Dl~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~kPvIAav~G~a 102 (229)
T PRK06213 30 MIDALNAALDQAE--DDRAVVVITGQPGIFSGGFDLKVMTSG-----AQAAIALLTAGSTLARRLLSHPKPVIVACTGHA 102 (229)
T ss_pred HHHHHHHHHHHhh--ccCcEEEEeCCCCceEcCcCHHHHhcc-----hHhHHHHHHHHHHHHHHHHcCCCCEEEEEcCee
Confidence 5789999999988 567999999999999999999987531 223344566677888899999999999999999
Q ss_pred ccchhhhhhcCCeEEEeCc-eeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccCCC
Q 019601 81 MGCGAGISLQGMYRVVTDK-TVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLNGR 158 (338)
Q Consensus 81 ~GgG~~lala~D~ria~~~-a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~ 158 (338)
+|||++|+++||+|||+++ ++|++||+++|++|+.++.+++++++|.. ++++++||+.++|+||+++||||+|||+++
T Consensus 103 ~GgG~~lal~~D~rva~~~~a~f~~pe~~~Gl~~~~~~~~~l~~~~g~~~a~~lll~g~~~~a~eA~~~Glv~~vv~~~~ 182 (229)
T PRK06213 103 IAKGAFLLLSADYRIGVHGPFKIGLNEVAIGMTMPHAAIELARDRLTPSAFQRAVINAEMFDPEEAVAAGFLDEVVPPEQ 182 (229)
T ss_pred eHHHHHHHHhCCeeeEecCCcEEECchhhhCCcCChHHHHHHHHHcCHHHHHHHHHcCcccCHHHHHHCCCceeccChHH
Confidence 9999999999999999999 99999999999998888888899999999 999999999999999999999999999877
Q ss_pred hhHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHHH
Q 019601 159 LPLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLK 238 (338)
Q Consensus 159 l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~ 238 (338)
+.+.. .+++++++
T Consensus 183 l~~~a-------------------------------------------------------------------~~~a~~la 195 (229)
T PRK06213 183 LLARA-------------------------------------------------------------------QAAARELA 195 (229)
T ss_pred HHHHH-------------------------------------------------------------------HHHHHHHh
Confidence 75322 25689999
Q ss_pred hcCchHHHHHHHHHHhhccCCHHHHHHHHHHHH
Q 019601 239 EASPLSLKVTLQSIREGRFQSLDQCLVREYRIT 271 (338)
Q Consensus 239 ~~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~ 271 (338)
+.+|.++..+|++++.....++.++++.|.+.+
T Consensus 196 ~~~~~a~~~~K~~l~~~~~~~l~~~~~~~~~~~ 228 (229)
T PRK06213 196 GLNMGAHAATKLKVRAAALEAIRAAIEGDAAEF 228 (229)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHhchhhhhhhc
Confidence 999999999999999887778888888776643
No 80
>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=100.00 E-value=3.6e-37 Score=320.24 Aligned_cols=254 Identities=19% Similarity=0.218 Sum_probs=195.3
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCC-CCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAG-RAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGI 79 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~ 79 (338)
|+.+|.+++++++.|+++++|||+|.+ ++||+|+|++++... ...+....+.+.++.++.+|.+++|||||+|||+
T Consensus 35 ~~~~L~~~l~~~~~d~~vr~vVl~~~~~~~F~aG~Dl~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~ 111 (708)
T PRK11154 35 FAEQVRAILKQLREDKELKGVVFISGKPDNFIAGADINMLAAC---KTAQEAEALARQGQQLFAEIEALPIPVVAAIHGA 111 (708)
T ss_pred HHHHHHHHHHHHHhCCCceEEEEecCCCCCcccCcChHHhhcc---CCHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCe
Confidence 578999999999999999999999975 899999999987431 1112233445556778889999999999999999
Q ss_pred cccchhhhhhcCCeEEEeCc--eeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccC
Q 019601 80 TMGCGAGISLQGMYRVVTDK--TVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLN 156 (338)
Q Consensus 80 a~GgG~~lala~D~ria~~~--a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~ 156 (338)
|+|||++|+++||+|||+++ ++|++||+++|++|++|++++|++++|.. |++|++||+.++|+||+++||||++|++
T Consensus 112 a~GgG~~LalacD~ria~~~a~a~fg~pe~~lGl~p~~gg~~~L~r~vG~~~A~~llltG~~i~a~eA~~~GLv~~vv~~ 191 (708)
T PRK11154 112 CLGGGLELALACHYRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMILTGKQLRAKQALKLGLVDDVVPH 191 (708)
T ss_pred eechHHHHHHhCCEEEEeCCCCceEeCccccCCCCCCccHHhHHHhhcCHHHHHHHHHhCCcCCHHHHHHCCCCcEecCh
Confidence 99999999999999999996 59999999999999999999999999999 9999999999999999999999999999
Q ss_pred CChhHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCH--HHHHHHHHhhhcccccHHHHHHH
Q 019601 157 GRLPLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTI--EEIIDALENEAASSYDVWCRKAV 234 (338)
Q Consensus 157 ~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~--~~i~~~l~~~~~~~~~~~a~~~a 234 (338)
+++.+...++..-.+...... .... ...+.+.. ..+++.. ...+
T Consensus 192 ~~l~~~a~~~A~~~~~~~~~~----------------~~~~------~~~~~~p~~~~~~~~~~------------~~~~ 237 (708)
T PRK11154 192 SILLEVAVELAKKGKPARRPL----------------PVRE------RLLEGNPLGRALLFKQA------------RKKT 237 (708)
T ss_pred HHHHHHHHHHHHhcCCccCcC----------------Cchh------hhcccCchhHHHHHHHH------------HHHH
Confidence 887654444421100000000 0000 00000000 1111111 1222
Q ss_pred HHHHhcCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCC
Q 019601 235 EKLKEASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDK 294 (338)
Q Consensus 235 ~~i~~~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k 294 (338)
++-.+..-.++..+|++++.....++.++++.|.+.+..++. ++|+++++++|+.++
T Consensus 238 ~~~~~g~~~A~~~~k~~i~~~~~~~~~~~l~~E~~~~~~~~~---s~~~~~~~~aF~~~~ 294 (708)
T PRK11154 238 LAKTQGNYPAPERILDVVRTGLEKGMSSGYEAEARAFGELAM---TPESAALRSIFFATT 294 (708)
T ss_pred HHhcccCChHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHH
Confidence 222333457999999999998888999999999999998876 999999999999654
No 81
>PRK08272 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=3.4e-37 Score=291.22 Aligned_cols=188 Identities=20% Similarity=0.259 Sum_probs=158.8
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccC--C-----------------hhhH--HHHHHHHH
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEG--K-----------------FEDF--KNFFETLY 59 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~--~-----------------~~~~--~~~~~~~~ 59 (338)
|+.+|.++++.++.|+++++|||+|.|++||+|+|++++....... . .... ..++..++
T Consensus 38 m~~eL~~al~~~~~d~~vrvvVl~G~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (302)
T PRK08272 38 TPLELRAAVERADLDPGVHVILVSGAGKGFCAGYDLSAYAEGSSSGGGGGAYPGKRQAVNHLPDDPWDPMIDYQMMSRFV 117 (302)
T ss_pred HHHHHHHHHHHHhhCCCceEEEEEcCCCCcccCcCHHHHhhcccccccccccccccccccccccccccchhhHHHHHHHH
Confidence 6789999999999999999999999999999999999985422100 0 0000 12345566
Q ss_pred HHHHHHhhCCCCEEEEEccccccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCC
Q 019601 60 QFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEK 138 (338)
Q Consensus 60 ~~~~~i~~~~kP~Iaav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~ 138 (338)
.++..+.+++|||||+|||+|+|||++|+++||+|||+++++|++||+++|.+|+. ..+++++|.. ++++++||+.
T Consensus 118 ~~~~~l~~~~kPvIAaV~G~a~GgG~~lalacD~~ias~~a~f~~pe~~~gg~~~~---~~~~~~vG~~~A~~llltG~~ 194 (302)
T PRK08272 118 RGFMSLWHAHKPTVAKVHGYCVAGGTDIALHCDQVIAADDAKIGYPPTRVWGVPAT---GMWAYRLGPQRAKRLLFTGDC 194 (302)
T ss_pred HHHHHHHhCCCCEEEEEccEeehhhHHHHHhCCEEEEeCCCEecCcchhcccCChH---HHHHHHhhHHHHHHHHHcCCc
Confidence 78888999999999999999999999999999999999999999999998665643 3467889999 9999999999
Q ss_pred CCHHHHHHcCccceeccCCChhHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHH
Q 019601 139 LNGVEMIACGLATHYTLNGRLPLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDAL 218 (338)
Q Consensus 139 ~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l 218 (338)
++|+||+++||||++||++++.+..
T Consensus 195 i~a~eA~~~GLv~~vv~~~~l~~~a------------------------------------------------------- 219 (302)
T PRK08272 195 ITGAQAAEWGLAVEAVPPEELDERT------------------------------------------------------- 219 (302)
T ss_pred cCHHHHHHcCCCceecCHHHHHHHH-------------------------------------------------------
Confidence 9999999999999999988775422
Q ss_pred HhhhcccccHHHHHHHHHHHhcCchHHHHHHHHHHhhccC
Q 019601 219 ENEAASSYDVWCRKAVEKLKEASPLSLKVTLQSIREGRFQ 258 (338)
Q Consensus 219 ~~~~~~~~~~~a~~~a~~i~~~sp~al~~~k~~l~~~~~~ 258 (338)
.+++++|++.+|.+++.+|++++..++.
T Consensus 220 ------------~~la~~ia~~~~~a~~~~K~~l~~~~~~ 247 (302)
T PRK08272 220 ------------ERLVERIAAVPVNQLAMVKLAVNSALLQ 247 (302)
T ss_pred ------------HHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 2569999999999999999999987654
No 82
>TIGR02440 FadJ fatty oxidation complex, alpha subunit FadJ. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Plays a minor role in aerobic beta-oxidation of fatty acids. FadJI complex is necessary for anaerobic growth on short-chain acids with nitrate as an electron acceptor. Activities include: enoyl-CoA hydratase (EC 4.2.1.17),3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadJ (aka YfcX). This model excludes the FadB of TIGR02437 equivalog.
Probab=100.00 E-value=8.8e-37 Score=316.74 Aligned_cols=254 Identities=18% Similarity=0.196 Sum_probs=195.9
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEE-EeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLM-KGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGI 79 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl-~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~ 79 (338)
|+.+|.++++.++.|+++++||| +|.|++||+|+|++++... ........+...++.++..+.+++|||||+|||+
T Consensus 30 ~~~eL~~~l~~~~~d~~vr~VVl~~g~g~~FcaG~Dl~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaVnG~ 106 (699)
T TIGR02440 30 FADQVSEILSQLKRDKSIRGLVLVSGKPDNFIAGADISMLAAC---QTAGEAKALAQQGQVLFAELEALPIPVVAAIHGA 106 (699)
T ss_pred HHHHHHHHHHHHhcCCCceEEEEEeCCCCceeeccCchhhhcc---CChhHHHHHHHHHHHHHHHHHhCCCCEEEEECCE
Confidence 57899999999999999999986 6788999999999987431 1122333445566778889999999999999999
Q ss_pred cccchhhhhhcCCeEEEeCc--eeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccC
Q 019601 80 TMGCGAGISLQGMYRVVTDK--TVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLN 156 (338)
Q Consensus 80 a~GgG~~lala~D~ria~~~--a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~ 156 (338)
|+|||++|+++||+|||+++ ++|++||+++|++|++|++++|++++|.. ++++++||+.++|++|+++||||++||+
T Consensus 107 a~GgG~~LaLacD~ria~~~~~a~fg~pev~lGl~p~~g~~~~L~r~vG~~~A~~llltG~~~~a~eA~~~GLV~~vv~~ 186 (699)
T TIGR02440 107 CLGGGLELALACHSRVCSDDDKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMILTGKQLRAKQALKLGLVDDVVPQ 186 (699)
T ss_pred eecHHHHHHHhCCEEEEcCCCCcEEechhhcccCCCCccHHHHHHHhcCHHHHHHHHHcCCcCCHHHHHhCCCCcEecCh
Confidence 99999999999999999986 79999999999999999999999999999 9999999999999999999999999999
Q ss_pred CChhHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcC--CHHHHHHHHHhhhcccccHHHHHHH
Q 019601 157 GRLPLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHD--TIEEIIDALENEAASSYDVWCRKAV 234 (338)
Q Consensus 157 ~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~--~~~~i~~~l~~~~~~~~~~~a~~~a 234 (338)
+++.+....+.+-.+... .+ .+.. .+..+.+ ....+++.. .+.+
T Consensus 187 ~~l~~~a~~~A~~~~~~~--------------~~--~~~~------~~~~~~~~~a~~~~~~~~------------~k~~ 232 (699)
T TIGR02440 187 SILLDTAVEMALKGKPIR--------------KP--LSLQ------ERLLEGTPLGRALLFDQA------------AKKT 232 (699)
T ss_pred hHHHHHHHHHHHhCCCCC--------------CC--ccch------hhhcccCchhHHHHHHHH------------HHHH
Confidence 888765554432100000 00 0000 0000000 011111111 1222
Q ss_pred HHHHhcCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCC
Q 019601 235 EKLKEASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDK 294 (338)
Q Consensus 235 ~~i~~~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k 294 (338)
++-....-.+...+|+.++.+...+++++++.|.+.+..++. ++|.++++++|+.++
T Consensus 233 ~~~~~~~~~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~---s~~~~~~~~~f~~~~ 289 (699)
T TIGR02440 233 AKKTQGNYPAAERILDVVRQGLAQGMQKGLDAEARAFGELVM---TPESAALRSIFFATT 289 (699)
T ss_pred HHhcccCChhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHH
Confidence 223344567888899999999999999999999999999986 999999999999654
No 83
>KOG1682 consensus Enoyl-CoA isomerase [Lipid transport and metabolism]
Probab=100.00 E-value=8.8e-36 Score=256.06 Aligned_cols=227 Identities=19% Similarity=0.241 Sum_probs=200.5
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGIT 80 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a 80 (338)
|+.+|.+.|-...++.++|+|||+..|+.||+|.||+++.. +...+.-...|+.+.+++.-|+++|.|||+-|||+|
T Consensus 60 M~~~Lq~~ll~d~d~~dlr~viita~GkifSaGH~LKELt~---e~g~d~haevFqtc~dvmn~Irn~pVPVia~VNG~A 136 (287)
T KOG1682|consen 60 MMCALQDALLKDKDNLDLRCVIITAQGKIFSAGHNLKELTN---EPGSDIHAEVFQTCTDVMNDIRNLPVPVIAKVNGYA 136 (287)
T ss_pred HHHHHHHHHhhcccccceeEEEEecCCccccccccHHHhhc---CccchHHHHHHHHHHHHHHHHhcCCCceEEEecchh
Confidence 67888888888888889999999999999999999999964 333455567789999999999999999999999999
Q ss_pred ccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccCCCh
Q 019601 81 MGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLNGRL 159 (338)
Q Consensus 81 ~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l 159 (338)
..+|+.|+..||++||+++++|..|..++|+++...+.. +.|.+.+. +.+|++||.+++++||+..||+++|||.+++
T Consensus 137 aAAGcQLVaSCD~vVa~k~SkF~tPG~~vGlFCSTPGvA-laRavpRkva~~ML~Tg~Pi~~eeAl~sGlvskvVp~~el 215 (287)
T KOG1682|consen 137 AAAGCQLVASCDMVVATKNSKFSTPGAGVGLFCSTPGVA-LARAVPRKVAAYMLMTGLPITGEEALISGLVSKVVPAEEL 215 (287)
T ss_pred hhccceEEEeeeEEEEecCccccCCCCceeeEecCcchh-HhhhcchhHHHHHHHhCCCCchHHHHHhhhhhhcCCHHHH
Confidence 999999999999999999999999999999988766655 78999999 9999999999999999999999999999998
Q ss_pred hHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHHHh
Q 019601 160 PLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKE 239 (338)
Q Consensus 160 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~ 239 (338)
+...+ +++..|-.
T Consensus 216 ~~e~~-------------------------------------------------------------------~i~~~i~~ 228 (287)
T KOG1682|consen 216 DKEIE-------------------------------------------------------------------EITNAIKA 228 (287)
T ss_pred HHHHH-------------------------------------------------------------------HHHHHHhh
Confidence 74322 56888889
Q ss_pred cCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCCCCC
Q 019601 240 ASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDPP 303 (338)
Q Consensus 240 ~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~~~~ 303 (338)
.|+..+.+.|+.+......+-.+++....+.....+. -.|++|||.+|+ +| |+|.|+|.
T Consensus 229 ~srav~slgk~f~y~q~~ms~~ea~~~~~~~m~~n~q---l~d~kegiasf~-~k-rp~~~~h~ 287 (287)
T KOG1682|consen 229 KSRAVISLGKEFYYKQLAMSQAEAFSAAQEKMCENFQ---LGDTKEGIASFF-EK-RPPNWKHQ 287 (287)
T ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhccc---ccchHHHHHHHh-cc-CCCCcCCC
Confidence 9999999999999988777777777776666655554 789999999999 99 99999973
No 84
>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399.
Probab=100.00 E-value=1.9e-35 Score=306.93 Aligned_cols=260 Identities=16% Similarity=0.195 Sum_probs=194.6
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGIT 80 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a 80 (338)
|+.+|.++++.++.|+++++|||||.|++||+|+|++++..... ........+++..+.++.+|..++|||||+|||+|
T Consensus 35 ~~~eL~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~pkPvIAai~G~a 113 (714)
T TIGR02437 35 TLASLDQALDAIKAQSSLKGVILTSGKDAFIVGADITEFLGLFA-LPDAELIQWLLFANSIFNKLEDLPVPTVAAINGIA 113 (714)
T ss_pred HHHHHHHHHHHHHhCCCceEEEEECCCCccccCcCHHHHhhccc-CCHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCee
Confidence 57899999999999999999999999999999999999853211 11223344556677888999999999999999999
Q ss_pred ccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccCCCh
Q 019601 81 MGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLNGRL 159 (338)
Q Consensus 81 ~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l 159 (338)
+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.. ++++++||+.++|++|+++||||+++|.+++
T Consensus 114 lGGGleLalacD~ria~~~a~fglPEv~lGl~Pg~Ggt~rL~rliG~~~A~~llltG~~~~A~eA~~~GLvd~vv~~~~l 193 (714)
T TIGR02437 114 LGGGCECVLATDFRIADDTAKIGLPETKLGIMPGFGGTVRLPRVIGADNALEWIASGKENRAEDALKVGAVDAVVTADKL 193 (714)
T ss_pred ecHHHHHHHhCCEEEEeCCCEEecchhhcCCCCCccHHHHHHHHhCHHHHHHHHHcCCcCCHHHHHHCCCCcEeeChhHH
Confidence 999999999999999999999999999999999999999999999999 9999999999999999999999999998888
Q ss_pred hHHHHHHhhc-ccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHH-HHHHH
Q 019601 160 PLVEERVGKL-ITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRK-AVEKL 237 (338)
Q Consensus 160 ~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~-~a~~i 237 (338)
.+...++... ....+.. .... ........ .+.+..++.. +++.+ ..++.
T Consensus 194 ~~~a~~~a~~~~~~~~~~-------~~~~-~~~~~~~~--~~~~~~~~~~-------------------~~~~~~~~~~~ 244 (714)
T TIGR02437 194 GAAALQLLKDAINGKLDW-------KAKR-QPKLEPLK--LSKIEAMMSF-------------------TTAKGMVAQVA 244 (714)
T ss_pred HHHHHHHHHHHhhcCCcc-------cccC-CCCccccc--ccchHHHHHH-------------------HHHHHHHHHhh
Confidence 7655444211 1000000 0000 00000000 0001111110 11122 23333
Q ss_pred HhcCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCC
Q 019601 238 KEASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDK 294 (338)
Q Consensus 238 ~~~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k 294 (338)
.++.|.... +.+.+..+.+.+++++++.|.+.|.+++. +++.++.+..|+.++
T Consensus 245 ~~~~pap~~-~~~~v~~~~~~~~~~gl~~E~~~f~~l~~---s~~a~~l~~~ff~~r 297 (714)
T TIGR02437 245 GPHYPAPMT-AVKTIEKAARFGRDKALEIEAKGFVKLAK---TSEAKALIGLFLNDQ 297 (714)
T ss_pred cCCCCCHHH-HHHHHHHHhcCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHhhhH
Confidence 344444433 45677878788999999999999999986 999999999999654
No 85
>PLN02267 enoyl-CoA hydratase/isomerase family protein
Probab=100.00 E-value=3.8e-35 Score=268.36 Aligned_cols=158 Identities=15% Similarity=0.172 Sum_probs=133.2
Q ss_pred CHHHHHHHHHHHhcCCCcE-EEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEccc
Q 019601 1 MVGRLKRLYESWEENPDIG-FVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGI 79 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~-~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~ 79 (338)
|+.+|.+++++++.|++++ +||++|.|++||+|+|++++... .........+.+.++.++.++..+||||||+|||+
T Consensus 27 ~~~eL~~al~~~~~d~~~~~vVV~~g~g~~FsaG~Dl~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~ 104 (239)
T PLN02267 27 LIDSIRSALRQVKSQATPGSVLITTAEGKFFSNGFDLAWAQAA--GSAPSRLHLMVAKLRPLVADLISLPMPTIAAVTGH 104 (239)
T ss_pred HHHHHHHHHHHHHhCCCCceEEEEcCCCCceeCCcCHHHHhcc--ccCHHHHHHHHHHHHHHHHHHhcCCCCEEEEECCc
Confidence 5789999999999998875 78889999999999999986421 11122223345566778889999999999999999
Q ss_pred cccchhhhhhcCCeEEEe-CceeEecCCCCcCcCCCcchHHHHhhccchH-H-HHHhhhCCCCCHHHHHHcCccceeccC
Q 019601 80 TMGCGAGISLQGMYRVVT-DKTVFSNPETQMGFHPDAGASFYLSHLPGYL-G-EYLALTGEKLNGVEMIACGLATHYTLN 156 (338)
Q Consensus 80 a~GgG~~lala~D~ria~-~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a-~~l~ltG~~~~a~eA~~~GLv~~vv~~ 156 (338)
|+|||++|+++||+|||+ ++++|++||+++|++++.+++.++++++|.. + +++++||+.++|+||+++|||+++||+
T Consensus 105 a~GgG~~lalacD~ria~~~~a~f~~pe~~~Gl~~p~~~~~~l~~~vG~~~a~~~llltG~~~~a~eA~~~Glv~~vv~~ 184 (239)
T PLN02267 105 ASAAGFILALSHDYVLMRKDRGVLYMSEVDIGLPLPDYFMALLRAKIGSPAARRDVLLRAAKLTAEEAVEMGIVDSAHDS 184 (239)
T ss_pred chHHHHHHHHHCCEEEecCCCCeEeccccccCCCCChHHHHHHHHHcChHHHHHHHHHcCCcCCHHHHHHCCCcceecCC
Confidence 999999999999999998 5689999999999974444577899999988 8 699999999999999999999999985
Q ss_pred -CChh
Q 019601 157 -GRLP 160 (338)
Q Consensus 157 -~~l~ 160 (338)
+++.
T Consensus 185 ~~~l~ 189 (239)
T PLN02267 185 AEETV 189 (239)
T ss_pred HHHHH
Confidence 4554
No 86
>KOG0016 consensus Enoyl-CoA hydratase/isomerase [Lipid transport and metabolism]
Probab=100.00 E-value=7.7e-35 Score=259.56 Aligned_cols=224 Identities=24% Similarity=0.310 Sum_probs=197.9
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCCh---hhHHHHHHHHHHHHHHHhhCCCCEEEEEc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKF---EDFKNFFETLYQFVYLQGTFVKPHVAILD 77 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~~kP~Iaav~ 77 (338)
|..++.++|+.+.+|+++..+|++|.|++||+|.|+..+.....+... +....+...+..+...+..++||+||.||
T Consensus 36 ~y~~i~~al~~a~~dds~~~tv~s~~G~~f~sG~Df~~~~~~~~~d~~~~~~~~~~~v~~~~~~v~~fi~f~Kplia~vN 115 (266)
T KOG0016|consen 36 DYVYIQRALEEANDDDSVSITVLSSNGSYFCSGLDFSPFAKALDDDANEESDKASKFVKNVSCFVNTFINFPKPLVALVN 115 (266)
T ss_pred HHHHHHHHHHHhhcccceEEEEEecCccEEeeccccchhhhcCCCcccccchhhHHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 456889999999999999999999999999999999998765433222 22233344445578889999999999999
Q ss_pred cccccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccC
Q 019601 78 GITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLN 156 (338)
Q Consensus 78 G~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~ 156 (338)
|+|+|.|+.+...||+++|+|+++|..|+.++|..|.+++++.+++++|.. |.+++|.|++++|+||.+.|||+++++.
T Consensus 116 GPAIGlgasil~lcD~V~A~Dka~F~TPfa~lGq~PEG~Ss~t~p~imG~~~A~E~ll~~~kltA~Ea~~~glVskif~~ 195 (266)
T KOG0016|consen 116 GPAIGLGASILPLCDYVWASDKAWFQTPFAKLGQSPEGCSSVTLPKIMGSASANEMLLFGEKLTAQEACEKGLVSKIFPA 195 (266)
T ss_pred CCccchhhHHhhhhheEEeccceEEeccchhcCCCCCcceeeeehHhhchhhHHHHHHhCCcccHHHHHhcCchhhhcCh
Confidence 999999999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred CChhHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHH
Q 019601 157 GRLPLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEK 236 (338)
Q Consensus 157 ~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~ 236 (338)
+.+.+ +.+ ..+++
T Consensus 196 ~tf~~--~v~-----------------------------------------------------------------~~ikq 208 (266)
T KOG0016|consen 196 ETFNE--EVL-----------------------------------------------------------------KKIKQ 208 (266)
T ss_pred HHHHH--HHH-----------------------------------------------------------------HHHHH
Confidence 87754 222 34788
Q ss_pred HHhcCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCC
Q 019601 237 LKEASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDK 294 (338)
Q Consensus 237 i~~~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k 294 (338)
+++.+|.++...|++++......+..+.+.|.......|. ++|+.+.+..|+..+
T Consensus 209 ~s~l~p~sl~~~K~L~rs~~k~~l~~an~~E~~~l~~~W~---s~e~~~~~~~~~~~~ 263 (266)
T KOG0016|consen 209 YSKLSPESLLGMKKLLRSNIKEELIKANEEECNVLLKQWV---SAECLARFKQYLSKK 263 (266)
T ss_pred HhcCCHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhcc---ChHHHHHHHHHhccc
Confidence 8999999999999999998888999999999999999986 999999999999433
No 87
>TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial. Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human, pig, and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16).
Probab=100.00 E-value=4.9e-34 Score=297.14 Aligned_cols=261 Identities=19% Similarity=0.206 Sum_probs=187.7
Q ss_pred CHHHHHHHHHHHhcCCCcEEE-EEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEccc
Q 019601 1 MVGRLKRLYESWEENPDIGFV-LMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGI 79 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~v-Vl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~ 79 (338)
|+.+|.+++++++.|+++++| |+||.|++||+|+|++++... ........+...++.++.++..++|||||+|||+
T Consensus 42 ~~~~L~~al~~~~~d~~vr~vVvltg~g~~F~aG~Dl~~~~~~---~~~~~~~~~~~~~~~l~~~i~~~~kPvIAav~G~ 118 (737)
T TIGR02441 42 LFAEFKEVMNELWTNEAIKSAVLISGKPGSFVAGADIQMIAAC---KTAQEVTQLSQEGQEMFERIEKSQKPIVAAISGS 118 (737)
T ss_pred HHHHHHHHHHHHhhCCCCEEEEEEECCCCcceeCcCHHHHhcc---CChHHHHHHHHHHHHHHHHHHhCCCCEEEEECCE
Confidence 578999999999999999965 679999999999999998531 1223344555667788999999999999999999
Q ss_pred cccchhhhhhcCCeEEEeCc--eeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccC
Q 019601 80 TMGCGAGISLQGMYRVVTDK--TVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLN 156 (338)
Q Consensus 80 a~GgG~~lala~D~ria~~~--a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~ 156 (338)
|+|||++|+++||+|||+++ ++|++||+++|++|++|++++|+|++|.. ++++++||+.++|+||+++||||+|||+
T Consensus 119 a~GgG~eLALacD~ria~~~a~a~fglpEv~lGl~Pg~Ggt~rLprliG~~~A~~l~ltG~~i~a~eA~~~GLVd~vv~~ 198 (737)
T TIGR02441 119 CLGGGLELALACHYRIATKDRKTLLGLPEVMLGLLPGAGGTQRLPKLTGVPAALDMMLTGKKIRADRAKKMGIVDQLVDP 198 (737)
T ss_pred eecHHHHHHHhCCEEEEcCCCCCeEecchhhhCCCCCccHhhhHHHhhCHHHHHHHHHcCCcCCHHHHHHCCCCeEecCC
Confidence 99999999999999999987 58999999999999999999999999999 9999999999999999999999999986
Q ss_pred --CC-----------hhHHHHHHh-hcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCc-CCHHHHHHHHHhh
Q 019601 157 --GR-----------LPLVEERVG-KLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSH-DTIEEIIDALENE 221 (338)
Q Consensus 157 --~~-----------l~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~-~~~~~i~~~l~~~ 221 (338)
++ +.+...++. .+.... ...+++.... +. ... ...+. .....+++...
T Consensus 199 ~~~~~~~l~~~~~~~l~~~A~~~a~~l~~~~-----~~~~~~~~~~-~~---~~~------~~~~~~~~~~~~~~~~~-- 261 (737)
T TIGR02441 199 LGPGLKPAEENTIEYLEEVAVKFAQGLANGK-----LSINRDKGLV-HK---ITQ------YVMTNPFVRQQVYKTAE-- 261 (737)
T ss_pred cccccccchhhhHHHHHHHHHHHHHHhhccc-----CCcccccccc-Cc---cch------hhcccchhHHHHHHHHH--
Confidence 22 221111111 000000 0000000000 00 000 00000 00112222221
Q ss_pred hcccccHHHHHHHHHHHhcCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCC
Q 019601 222 AASSYDVWCRKAVEKLKEASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDK 294 (338)
Q Consensus 222 ~~~~~~~~a~~~a~~i~~~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k 294 (338)
..+.++...+. .+...+.+.+..+...++++++..|.+.|.+++. +++.+.-+..|+.++
T Consensus 262 ---------~~~~~~~~g~~-~Ap~~~l~~v~~~~~~~~~~gl~~E~~~f~~l~~---s~~a~al~~~f~~~~ 321 (737)
T TIGR02441 262 ---------DKVMKQTKGLY-PAPLKILDVVRTGYDQGPDAGYEAESKAFGELSM---TFESKALIGLFHGQT 321 (737)
T ss_pred ---------HHHHHhccCCC-ccHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHH
Confidence 12333333323 3444466678888888999999999999999986 999999999998654
No 88
>COG0447 MenB Dihydroxynaphthoic acid synthase [Coenzyme metabolism]
Probab=100.00 E-value=3.7e-35 Score=254.42 Aligned_cols=226 Identities=19% Similarity=0.278 Sum_probs=179.7
Q ss_pred HHHHHHHHHHHhcCCCcEEEEEEeC--C-CCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcc
Q 019601 2 VGRLKRLYESWEENPDIGFVLMKGA--G-RAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDG 78 (338)
Q Consensus 2 ~~eL~~~l~~~~~d~~v~~vVl~g~--g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G 78 (338)
+.||.++|..+..|++|.+|||||+ | ++||+|+|-+.-.....-.+.+... --...++-+.|+.+||||||.|+|
T Consensus 48 V~Em~~Af~~Ar~d~~vGvi~lTG~~~G~~AFCsGGDQ~vRg~~~gY~~d~~~~--rLnvLdlQrlIR~~PKpViA~V~G 125 (282)
T COG0447 48 VDEMIDAFADARDDPNVGVILLTGNGDGDKAFCSGGDQKVRGDSGGYVDDDGIP--RLNVLDLQRLIRTMPKPVIAMVAG 125 (282)
T ss_pred HHHHHHHHHhhhcCCCccEEEEecCCCCCeeeecCCCceecccCCCccCCccCc--ccchhhHHHHHHhCCcceEEEEee
Confidence 5799999999999999999999985 5 8999999987543211000001110 011235667789999999999999
Q ss_pred ccccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccCC
Q 019601 79 ITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLNG 157 (338)
Q Consensus 79 ~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~ 157 (338)
+++|||-.|-+.||+.||+++|+|+....++|.+-++.++.+|+|++|.+ |+++.+.|+.++|+||+++|+||.|||.+
T Consensus 126 ~AiGGGhvlhvvCDLTiAa~nA~FgQTgp~VGSFD~G~Gs~ylar~VGqKkArEIwfLcR~Y~A~eal~MGlVN~Vvp~~ 205 (282)
T COG0447 126 YAIGGGHVLHVVCDLTIAADNAIFGQTGPKVGSFDGGYGSSYLARIVGQKKAREIWFLCRQYDAEEALDMGLVNTVVPHA 205 (282)
T ss_pred EeccCccEEEEEeeeeeehhcchhcCCCCCcccccCcccHHHHHHHhhhhhhHHhhhhhhhccHHHHHhcCceeeeccHH
Confidence 99999999999999999999999999999999987776777799999999 99999999999999999999999999999
Q ss_pred ChhHHHHHHhhcccCChHHHHHHHHHhccccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHH
Q 019601 158 RLPLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKL 237 (338)
Q Consensus 158 ~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i 237 (338)
+|++... +.+++|
T Consensus 206 ~LE~e~v-------------------------------------------------------------------~W~~E~ 218 (282)
T COG0447 206 DLEKETV-------------------------------------------------------------------QWAREM 218 (282)
T ss_pred HHHHHHH-------------------------------------------------------------------HHHHHH
Confidence 9975322 347888
Q ss_pred HhcCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhhhcCCCCCCCCCC
Q 019601 238 KEASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDP 302 (338)
Q Consensus 238 ~~~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~fl~~k~r~p~~~~ 302 (338)
.++||.+++..|-.++...+.. .++ .|..--..++. +.+++.+||-.+|+ +| |+|+|+.
T Consensus 219 l~kSP~AlR~LK~Afnad~DGl--aG~-q~~ag~at~L~-YmTdEa~EGr~AF~-eK-R~Pdf~~ 277 (282)
T COG0447 219 LAKSPTALRMLKAAFNADCDGL--AGL-QELAGNATLLY-YMTDEAQEGRDAFL-EK-RKPDFSK 277 (282)
T ss_pred HhcChHHHHHHHHHhcCCCchh--hHH-HHhcccceEEE-EechhhhhhHHHHh-hc-cCCChHh
Confidence 9999999999999998654421 111 12222122222 34899999999999 99 9999973
No 89
>cd06558 crotonase-like Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. Many of these play important roles in fatty acid metabolism. In addition to a conserved structural core and the formation of trimers (or dimers of trimers), a common feature in this superfamily is the stabilization of an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two conserved backbone NH groups in active sites that form an oxyanion hole.
Probab=100.00 E-value=1e-32 Score=244.03 Aligned_cols=162 Identities=27% Similarity=0.474 Sum_probs=147.9
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGIT 80 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a 80 (338)
|+++|.++++.++.|+++++|||||.|+.||+|+|++++...... .+....+.+.++.++.++..++|||||++||+|
T Consensus 27 ~~~~l~~~l~~~~~d~~~~~vvl~~~~~~Fs~G~dl~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~p~Ia~v~G~a 104 (195)
T cd06558 27 MLDELAAALDEAEADPDVRVVVLTGAGKAFCAGADLKELAALSDA--GEEARAFIRELQELLRALLRLPKPVIAAVNGAA 104 (195)
T ss_pred HHHHHHHHHHHHHhCCCceEEEEECCCCceEeCcCHHHHhccccc--chhHHHHHHHHHHHHHHHHcCCCCEEEEECCee
Confidence 578999999999999999999999999999999999998653211 113567788889999999999999999999999
Q ss_pred ccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceeccCCCh
Q 019601 81 MGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTLNGRL 159 (338)
Q Consensus 81 ~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l 159 (338)
.|+|+.++++||+||++++++|++||+++|++|+.|+++++++++|.. +.+++++|+.++++||+++||++++++.+++
T Consensus 105 ~g~G~~la~~~D~~i~~~~~~~~~pe~~~G~~p~~g~~~~l~~~~g~~~a~~~~l~g~~~~a~ea~~~Glv~~~~~~~~l 184 (195)
T cd06558 105 LGGGLELALACDIRIAAEDAKFGLPEVKLGLVPGGGGTQRLPRLVGPARARELLLTGRRISAEEALELGLVDEVVPDEEL 184 (195)
T ss_pred ecHHHHHHHhCCEEEecCCCEEechhhhcCCCCCCcHHHHHHHHhCHHHHHHHHHcCCccCHHHHHHcCCCCeecChhHH
Confidence 999999999999999999999999999999999999999999999999 9999999999999999999999999999777
Q ss_pred hHHHH
Q 019601 160 PLVEE 164 (338)
Q Consensus 160 ~~~~~ 164 (338)
.+...
T Consensus 185 ~~~a~ 189 (195)
T cd06558 185 LAAAL 189 (195)
T ss_pred HHHHH
Confidence 65443
No 90
>TIGR03222 benzo_boxC benzoyl-CoA-dihydrodiol lyase. In the presence of O2, the benzoyl-CoA oxygenase/reductase BoxBA BoxAB converts benzoyl-CoA to 2,3-dihydro-2,3-dihydroxybenzoyl-CoA. Members of this family, BoxC, homologous to enoyl-CoA hydratases/isomerases, hydrolyze this compound to 3,4-dehydroadipyl-CoA semialdehyde + HCOOH.
Probab=99.97 E-value=1.3e-31 Score=268.73 Aligned_cols=162 Identities=19% Similarity=0.208 Sum_probs=134.4
Q ss_pred CHHHHHHHHHHHh-cCCCcEEEEEEeC-CCCccccCChHHHHHHhccCChhhHHHHH-HHHHHHHHHHhhCCCCEEEEEc
Q 019601 1 MVGRLKRLYESWE-ENPDIGFVLMKGA-GRAFCSGGDVIALYQLLNEGKFEDFKNFF-ETLYQFVYLQGTFVKPHVAILD 77 (338)
Q Consensus 1 m~~eL~~~l~~~~-~d~~v~~vVl~g~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~kP~Iaav~ 77 (338)
|+.+|.++++.++ .|+++|+|||||. |++||+|+|++++.... .........+. .....+...+..+||||||+||
T Consensus 49 ~l~eL~~al~~~~~~d~~vRvVVLtg~~Gk~FcaG~DL~~~~~~~-~~~~~~~~~~~~~~~~~i~~~i~~~pkPvIAAVn 127 (546)
T TIGR03222 49 VDIELHDAVQRIRFEHPEVRTVVMTSGKDRVFCSGANIFMLGLST-HAWKVNFCKFTNETRNGIEDSSRHSGLKFLAAVN 127 (546)
T ss_pred HHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcCCcCHHHHhccc-cchhhhHHHHHHHHHHHHHHHHHhCCCCEEEEEC
Confidence 5789999999999 7899999999997 59999999999874311 00001111111 1123355567889999999999
Q ss_pred cccccchhhhhhcCCeEEEeCc--eeEecCCCC-cCcCCCcchHHHHh--hccchH-HHHHhhhCCCCCHHHHHHcCccc
Q 019601 78 GITMGCGAGISLQGMYRVVTDK--TVFSNPETQ-MGFHPDAGASFYLS--HLPGYL-GEYLALTGEKLNGVEMIACGLAT 151 (338)
Q Consensus 78 G~a~GgG~~lala~D~ria~~~--a~f~~pe~~-~Gl~p~~g~~~~l~--r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~ 151 (338)
|+|+|||++|+++||+||++++ ++|++||++ +|++|++|+..++. +++|.. +++|++||+.++|+||+++|||+
T Consensus 128 G~a~GGG~~LALacD~rvAs~~a~a~f~~pEv~~lGl~P~~gg~~~l~~~~~vg~~~A~~llltG~~i~A~eA~~~GLV~ 207 (546)
T TIGR03222 128 GTCAGGGYELALACDEIMLVDDRSSSVSLPEVPLLGVLPGTGGLTRVTDKRRVRRDHADIFCTIEEGVRGKRAKEWRLVD 207 (546)
T ss_pred CEeehHHHHHHHhCCEEEEecCCCcEEEccchhccCcCCccchhhhccccchhCHHHHHHHHHcCCCccHHHHHHcCCce
Confidence 9999999999999999999986 799999997 99999999988887 689999 99999999999999999999999
Q ss_pred eeccCCChhHHH
Q 019601 152 HYTLNGRLPLVE 163 (338)
Q Consensus 152 ~vv~~~~l~~~~ 163 (338)
++||++++.+..
T Consensus 208 ~vv~~~~l~~~a 219 (546)
T TIGR03222 208 EVVKPSQFDAAI 219 (546)
T ss_pred EEeChHHHHHHH
Confidence 999988876533
No 91
>PRK08184 benzoyl-CoA-dihydrodiol lyase; Provisional
Probab=99.97 E-value=6.2e-31 Score=264.56 Aligned_cols=161 Identities=18% Similarity=0.219 Sum_probs=134.0
Q ss_pred CHHHHHHHHHHHh-cCCCcEEEEEEeCC-CCccccCChHHHHHHhccCChhhHHHHHHH-HHHHHHHHhhCCCCEEEEEc
Q 019601 1 MVGRLKRLYESWE-ENPDIGFVLMKGAG-RAFCSGGDVIALYQLLNEGKFEDFKNFFET-LYQFVYLQGTFVKPHVAILD 77 (338)
Q Consensus 1 m~~eL~~~l~~~~-~d~~v~~vVl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~kP~Iaav~ 77 (338)
|+.+|.+++++++ .|+++++|||||.+ ++||+|+|++.+....... ......+... ...+...+..++|||||+||
T Consensus 53 m~~eL~~al~~~~~~d~~vrvVVLtg~ggk~FcaG~DL~~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~pkPvIAAVn 131 (550)
T PRK08184 53 VDIELHDALQRIRFEHPEVRTVVVTSAKDRVFCSGANIFMLGGSSHAW-KVNFCKFTNETRNGIEDSSRHSGLKFIAAVN 131 (550)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCccCHHhHhccccch-hhhHHHHHHHHHHHHHHHHHhCCCCEEEEEC
Confidence 5789999999999 78999999999985 9999999999874311000 0011111111 12345567889999999999
Q ss_pred cccccchhhhhhcCCeEEEeCc--eeEecCCCC-cCcCCCcchHHHHh--hccchH-HHHHhhhCCCCCHHHHHHcCccc
Q 019601 78 GITMGCGAGISLQGMYRVVTDK--TVFSNPETQ-MGFHPDAGASFYLS--HLPGYL-GEYLALTGEKLNGVEMIACGLAT 151 (338)
Q Consensus 78 G~a~GgG~~lala~D~ria~~~--a~f~~pe~~-~Gl~p~~g~~~~l~--r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~ 151 (338)
|+|+|||++|+++|||||++++ ++|++||++ +|++|++|+++++. +++|.. ++++++||+.++|+||+++|||+
T Consensus 132 G~a~GGG~~LALacD~rIas~~~~a~fg~pEv~~~Gl~P~~gg~~rl~~~~~vg~~~A~~llltG~~i~AeeA~~~GLVd 211 (550)
T PRK08184 132 GTCAGGGYELALACDEIVLVDDRSSAVSLPEVPLLGVLPGTGGLTRVTDKRKVRRDLADIFCTIEEGVRGKRAVDWRLVD 211 (550)
T ss_pred CEeehHHHHHHHhCCEEEEecCCCcEEEccchhccccCCCcchHHHhhhhhhcCHHHHHHHHHhCCcccHHHHHHcCCcc
Confidence 9999999999999999999987 899999997 99999999999888 779999 99999999999999999999999
Q ss_pred eeccCCChhHH
Q 019601 152 HYTLNGRLPLV 162 (338)
Q Consensus 152 ~vv~~~~l~~~ 162 (338)
++||++++.+.
T Consensus 212 ~vv~~d~l~~~ 222 (550)
T PRK08184 212 EVVKPSKFDAK 222 (550)
T ss_pred EeeCHHHHHHH
Confidence 99998877643
No 92
>PF13766 ECH_C: 2-enoyl-CoA Hydratase C-terminal region; PDB: 3JU1_A 3BPT_A.
Probab=99.86 E-value=1e-21 Score=160.12 Aligned_cols=116 Identities=51% Similarity=0.885 Sum_probs=99.3
Q ss_pred HHHHHHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHHHhcCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhc
Q 019601 196 LRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKEASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGI 275 (338)
Q Consensus 196 ~~~~~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~ 275 (338)
.++.+.|++||+.+++++|+++|++ .+++||.+.++.|.++||.|+++|.++++++...++.++++.|+++..+++
T Consensus 3 ~~~~~~I~~~F~~~s~~eI~~~L~~----~~~~~a~~~~~~l~~~SP~Sl~vt~~~l~~~~~~sl~e~l~~E~~~a~~~~ 78 (118)
T PF13766_consen 3 AEHLEAIDRCFSADSVEEIIEALEA----DGDEWAQKTLETLRSGSPLSLKVTFEQLRRGRNLSLAECLRMEYRLASRCM 78 (118)
T ss_dssp HHCHHHHHHHTTSSSHHHHHHHHHH----HS-HHHHHHHHHHCCS-HHHHHHHHHHHHCCTTS-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHHc----cCcHHHHHHHHHHHHCCHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHh
Confidence 3456889999999999999999998 467999999999999999999999999999999999999999999999998
Q ss_pred ccCCCCcHHhhHhhhhcCCCCCCCCCCCCCCCCCHHHHhcccC
Q 019601 276 SKKVSNDFCEGIRARLVDKDFAPKWDPPSLADVSKDMVDCYFS 318 (338)
Q Consensus 276 ~~~~~~d~~egi~~fl~~k~r~p~~~~~~~~~~~~~~~~~~~~ 318 (338)
. .+||.|||++.|++|++.|+|+|.++++|++++|+.+|+
T Consensus 79 ~---~~DF~EGVRA~LIDKd~~P~W~p~~l~~V~~~~V~~~f~ 118 (118)
T PF13766_consen 79 R---HPDFAEGVRALLIDKDKNPKWSPASLEDVSDEDVDSFFE 118 (118)
T ss_dssp C---CSCHHHHHHHHTTS-------SSSSCCCS-HHHHHHHCS
T ss_pred c---cchHHHHHHHHHhcCCCCCCCCCCChHHCCHHHHHHHhC
Confidence 6 899999999999999999999999999999999999985
No 93
>cd07014 S49_SppA Signal peptide peptidase A. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppA is an intramembrane enzyme found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown these bacterial, archaeal and thylakoid SppAs to be ClpP-like serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain, cleaving peptide bonds in the plane of the lipid bilayer. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad (both residues absolutely conserved within bacteria, chloroplast and mitochondrial signal peptidase family members) and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases. In addition to the carboxyl-terminal p
Probab=99.81 E-value=8.2e-20 Score=159.73 Aligned_cols=139 Identities=16% Similarity=0.010 Sum_probs=114.2
Q ss_pred HHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEccccc
Q 019601 2 VGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITM 81 (338)
Q Consensus 2 ~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a~ 81 (338)
+.+|.+++++++.|+++++|||++ +|.|+|+.... .+.+++..+.+++|||||+++|.|.
T Consensus 24 ~~~l~~~l~~a~~d~~v~~vvl~~----~~~gg~~~~~~----------------~~~~~i~~~~~~~kpVia~v~G~a~ 83 (177)
T cd07014 24 GDTTAAQIRDARLDPKVKAIVLRV----NSPGGSVTASE----------------VIRAELAAARAAGKPVVASGGGNAA 83 (177)
T ss_pred HHHHHHHHHHHhcCCCceEEEEEe----eCCCcCHHHHH----------------HHHHHHHHHHhCCCCEEEEECCchh
Confidence 578999999999999999999997 58898877531 2334566777899999999999999
Q ss_pred cchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHH--------HHhhccc--hH-HHHHhhhCCCCCHHHHHHcCcc
Q 019601 82 GCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASF--------YLSHLPG--YL-GEYLALTGEKLNGVEMIACGLA 150 (338)
Q Consensus 82 GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~--------~l~r~~g--~~-a~~l~ltG~~~~a~eA~~~GLv 150 (338)
|+|+.|+++||++++++++.|+.+.+..+..+...... .+++..| .. ..+++..|..++|++|++.|||
T Consensus 84 g~g~~la~a~D~i~a~~~a~~~~~G~~~~~~~~~~~l~~~~~~~~~~v~~~rg~~~~~~~~~l~~g~~~~a~~A~~~GLV 163 (177)
T cd07014 84 SGGYWISTPANYIVANPSTLVGSIGIFGVQLADQLSIENGYKRFITLVADNRHSTPEQQIDKIAQGGVWTGQDAKANGLV 163 (177)
T ss_pred HHHHHHHHhCCEEEECCCCeEEEechHhhHHHHHHHHHHHHHHHHHHHHHhCCCCHHHhHHHhcCcCeEeHHHHHHcCCc
Confidence 99999999999999999999999988776433222222 3444555 66 7889999999999999999999
Q ss_pred ceeccCCChh
Q 019601 151 THYTLNGRLP 160 (338)
Q Consensus 151 ~~vv~~~~l~ 160 (338)
|++.+.+++.
T Consensus 164 D~v~~~~e~~ 173 (177)
T cd07014 164 DSLGSFDDAV 173 (177)
T ss_pred ccCCCHHHHH
Confidence 9999876654
No 94
>cd07020 Clp_protease_NfeD_1 Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease. Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentially c
Probab=99.74 E-value=1.3e-17 Score=147.07 Aligned_cols=133 Identities=16% Similarity=0.057 Sum_probs=106.5
Q ss_pred HHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEc---cc
Q 019601 3 GRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILD---GI 79 (338)
Q Consensus 3 ~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~---G~ 79 (338)
..+.+.|+.++.++ ++.|+|.=+ |-|+++..-. .++..|..++||||++|+ |+
T Consensus 16 ~~l~~~l~~a~~~~-~~~vvl~In----SpGG~v~~~~-------------------~i~~~l~~~~kPvia~v~~~~G~ 71 (187)
T cd07020 16 DYLERAIDQAEEGG-ADALIIELD----TPGGLLDSTR-------------------EIVQAILASPVPVVVYVYPSGAR 71 (187)
T ss_pred HHHHHHHHHHHhCC-CCEEEEEEE----CCCCCHHHHH-------------------HHHHHHHhCCCCEEEEEecCCCC
Confidence 46788888888665 777777633 4456655421 334456789999999999 99
Q ss_pred cccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCc--------------chHHHHhhccch--H-HHHHhhhCCCCCHH
Q 019601 80 TMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDA--------------GASFYLSHLPGY--L-GEYLALTGEKLNGV 142 (338)
Q Consensus 80 a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~--------------g~~~~l~r~~g~--~-a~~l~ltG~~~~a~ 142 (338)
|.|||+.|+++||++|++++++|+.+++..|..+.. +....+++..|. . +.+++++|+.|+|+
T Consensus 72 AasgG~~iala~D~iva~p~a~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G~~~~~a~~~l~~g~~~~a~ 151 (187)
T cd07020 72 AASAGTYILLAAHIAAMAPGTNIGAAHPVAIGGGGGSDPVMEKKILNDAVAYIRSLAELRGRNAEWAEKAVRESLSLTAE 151 (187)
T ss_pred chhHHHHHHHhCCceeECCCCcEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCCeecHH
Confidence 999999999999999999999999999985544432 234567888887 5 89999999999999
Q ss_pred HHHHcCccceeccCC-Ch
Q 019601 143 EMIACGLATHYTLNG-RL 159 (338)
Q Consensus 143 eA~~~GLv~~vv~~~-~l 159 (338)
||+++||+|+++++. ++
T Consensus 152 eA~~~Glvd~v~~~~~~~ 169 (187)
T cd07020 152 EALKLGVIDLIAADLNEL 169 (187)
T ss_pred HHHHcCCcccccCCHHHH
Confidence 999999999999885 44
No 95
>cd07019 S49_SppA_1 Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppAs in this subfamily are found in all three domains of life and are involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Site-directed mutagenesis and sequence analysis have shown these bacterial, archaeal and thylakoid SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad (both residues absolutely conserved within bacteria, chloroplast and mitochondrial signal peptidase family members) and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases. In addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members, the E. coli SppA contains an amino-te
Probab=99.59 E-value=3.4e-15 Score=134.19 Aligned_cols=138 Identities=17% Similarity=0.108 Sum_probs=101.8
Q ss_pred HHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEccccc
Q 019601 2 VGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITM 81 (338)
Q Consensus 2 ~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a~ 81 (338)
+.+|.++|+.+..|+++++|||+ .||.|+|+..+. .+.+.+..+..++||||++++|.|.
T Consensus 23 ~~~l~~~l~~a~~d~~v~~ivL~----~~s~Gg~~~~~~----------------~~~~~l~~~~~~~kpVia~v~g~a~ 82 (211)
T cd07019 23 GDTTAAQIRDARLDPKVKAIVLR----VNSPGGSVTASE----------------VIRAELAAARAAGKPVVVSAGGAAA 82 (211)
T ss_pred HHHHHHHHHHHhhCCCceEEEEE----EcCCCcCHHHHH----------------HHHHHHHHHHhCCCCEEEEECCeeh
Confidence 57899999999999999999998 789999998752 1233456678899999999999999
Q ss_pred cchhhhhhcCCeEEEeCceeEecCC------------CCcCcCC---Cc-c-------------hHHHHhhc--------
Q 019601 82 GCGAGISLQGMYRVVTDKTVFSNPE------------TQMGFHP---DA-G-------------ASFYLSHL-------- 124 (338)
Q Consensus 82 GgG~~lala~D~ria~~~a~f~~pe------------~~~Gl~p---~~-g-------------~~~~l~r~-------- 124 (338)
|+|+.|+++||.+++++++.|+... .++|+-+ .. | .-..+...
T Consensus 83 s~gy~la~~aD~i~a~~~a~~gsiGv~~~~~~~~~~l~k~Gv~~~~~~~~g~~k~~~~~~~s~e~r~~~~~~ld~~~~~f 162 (211)
T cd07019 83 SGGYWISTPANYIVANPSTLTGSIGIFGVITTVENSLDSIGVHTDGVSTSPLADVSITRALPPEAQLGLQLSIENGYKRF 162 (211)
T ss_pred hHHHHHHHhCCEEEEcCCCEEEEeEEEEEcCCHHHHHHhcCCceEEEEecCcccCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998886333 1233311 11 1 00011111
Q ss_pred ---------cchHHHHHhhhCCCCCHHHHHHcCccceeccCCCh
Q 019601 125 ---------PGYLGEYLALTGEKLNGVEMIACGLATHYTLNGRL 159 (338)
Q Consensus 125 ---------~g~~a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l 159 (338)
+.....+-...|..+++++|++.||||++...++.
T Consensus 163 ~~~Va~~R~~~~~~l~~~~~~~~~~~~~A~~~GLvD~i~~~~~~ 206 (211)
T cd07019 163 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDA 206 (211)
T ss_pred HHHHHhhCCCCHHHHHHhcCCcEEeHHHHHHcCCcccCCCHHHH
Confidence 11223444667899999999999999998875543
No 96
>cd00394 Clp_protease_like Caseinolytic protease (ClpP) is an ATP-dependent protease. Clp protease (caseinolytic protease; ClpP; endopeptidase Clp; Peptidase S14; ATP-dependent protease, ClpAP)-like enzymes are highly conserved serine proteases and belong to the ClpP/Crotonase superfamily. Included in this family are Clp proteases that are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. The functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of protease activity in the presence of ATP. Active site consists of the triad Ser, His and Asp, preferring hydrophobic or non-polar residues at P1 or P1' positions. The protease exists as a tetradec
Probab=99.50 E-value=1.7e-13 Score=117.77 Aligned_cols=130 Identities=16% Similarity=0.090 Sum_probs=100.5
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGIT 80 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a 80 (338)
++.+|.+.|+.++.|+++++|+|... |.|+|+... ..+...+..++||||+.++|.|
T Consensus 12 ~~~~l~~~l~~a~~d~~~~~ivl~~~----s~Gg~~~~~-------------------~~i~~~l~~~~kpvva~~~g~~ 68 (161)
T cd00394 12 SADQLAAQIRFAEADNSVKAIVLEVN----TPGGRVDAG-------------------MNIVDALQASRKPVIAYVGGQA 68 (161)
T ss_pred hHHHHHHHHHHHHhCCCCceEEEEEE----CCCcCHHHH-------------------HHHHHHHHHhCCCEEEEECChh
Confidence 46789999999999999999999874 778776543 1234456678899999999999
Q ss_pred ccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchH------HHH----hh---------ccchH-HHHHhhhCCCCC
Q 019601 81 MGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGAS------FYL----SH---------LPGYL-GEYLALTGEKLN 140 (338)
Q Consensus 81 ~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~------~~l----~r---------~~g~~-a~~l~ltG~~~~ 140 (338)
.++|+.|+++||.|++++++.|++..+..+.....+-. ..+ .+ ..... ..+.+.+|..++
T Consensus 69 ~s~g~~la~~~d~~~~~~~a~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~r~~~~~~~~~~~~~~~~~~ 148 (161)
T cd00394 69 ASAGYYIATAANKIVMAPGTRVGSHGPIGGYGGNGNPTAQEADQRIILYFIARFISLVAENRGQTTEKLEEDIEKDLVLT 148 (161)
T ss_pred HHHHHHHHhCCCEEEECCCCEEEEeeeEEecCCCCChHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHhcCCcEEc
Confidence 99999999999999999999999998876653321000 011 11 12333 566777899999
Q ss_pred HHHHHHcCcccee
Q 019601 141 GVEMIACGLATHY 153 (338)
Q Consensus 141 a~eA~~~GLv~~v 153 (338)
|+||++.||||++
T Consensus 149 a~eA~~~GLvD~i 161 (161)
T cd00394 149 AQEALEYGLVDAL 161 (161)
T ss_pred HHHHHHcCCcCcC
Confidence 9999999999975
No 97
>cd07016 S14_ClpP_1 Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease. Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. This subfamily only contains bacterial sequences. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which a
Probab=99.47 E-value=4e-13 Score=115.46 Aligned_cols=126 Identities=15% Similarity=0.123 Sum_probs=94.3
Q ss_pred HHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEccccc
Q 019601 2 VGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITM 81 (338)
Q Consensus 2 ~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a~ 81 (338)
.+.+.+.|+.++.+.. -.+.|.+.|+ ++..- ..+...|..++||||+.++|.|.
T Consensus 17 ~~~~~~~l~~~~~~~~-i~l~inspGG------~~~~~-------------------~~i~~~i~~~~~pvi~~v~g~a~ 70 (160)
T cd07016 17 AKEFKDALDALGDDSD-ITVRINSPGG------DVFAG-------------------LAIYNALKRHKGKVTVKIDGLAA 70 (160)
T ss_pred HHHHHHHHHhccCCCC-EEEEEECCCC------CHHHH-------------------HHHHHHHHhcCCCEEEEEcchHH
Confidence 4567888888887633 3455555543 33221 23555677889999999999999
Q ss_pred cchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcch---------------HHHHhhccc--hH-HHHHhhhCCCCCHHH
Q 019601 82 GCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGA---------------SFYLSHLPG--YL-GEYLALTGEKLNGVE 143 (338)
Q Consensus 82 GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~---------------~~~l~r~~g--~~-a~~l~ltG~~~~a~e 143 (338)
|+|+.|+++||+|+++++++|+++....|..+.... ...+.+..| .. ..+++.++..++|+|
T Consensus 71 s~g~~ia~a~d~~~~~~~a~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~l~a~e 150 (160)
T cd07016 71 SAASVIAMAGDEVEMPPNAMLMIHNPSTGAAGNADDLRKAADLLDKIDESIANAYAEKTGLSEEEISALMDAETWLTAQE 150 (160)
T ss_pred hHHHHHHhcCCeEEECCCcEEEEECCccccCcCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhCCeECcHHH
Confidence 999999999999999999999998877666444321 223666677 45 677777777899999
Q ss_pred HHHcCcccee
Q 019601 144 MIACGLATHY 153 (338)
Q Consensus 144 A~~~GLv~~v 153 (338)
|+++||+|+|
T Consensus 151 A~~~GliD~v 160 (160)
T cd07016 151 AVELGFADEI 160 (160)
T ss_pred HHHcCCCCcC
Confidence 9999999975
No 98
>cd07022 S49_Sppa_36K_type Signal peptide peptidase A (SppA) 36K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 36K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily are all bacterial and include sohB peptidase and protein C. These are sometimes referred to as 36K type since they contain only one domain, unlike E. coli SppA that also contains an amino-terminal domain. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases.
Probab=99.41 E-value=1.4e-12 Score=117.44 Aligned_cols=136 Identities=19% Similarity=0.157 Sum_probs=94.4
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGIT 80 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a 80 (338)
++.+|.++|++++.|+++++|||+. +|.|+++... ..+...+..+.. +|||||+++|.|
T Consensus 26 ~~~~l~~~l~~a~~d~~i~~Vvl~~----~s~gg~~~~~----------------~~l~~~l~~~~~-~KpViA~v~g~a 84 (214)
T cd07022 26 SYEGIAAAIRAALADPDVRAIVLDI----DSPGGEVAGV----------------FELADAIRAARA-GKPIVAFVNGLA 84 (214)
T ss_pred cHHHHHHHHHHHhhCCCCcEEEEEE----eCCCCcHHHH----------------HHHHHHHHHHhc-CCCEEEEECCch
Confidence 4689999999999999999999976 4667765542 112233334444 699999999999
Q ss_pred ccchhhhhhcCCeEEEeCceeEecCCCC------------cCcCCCc---c-----------hH----HHHhhc------
Q 019601 81 MGCGAGISLQGMYRVVTDKTVFSNPETQ------------MGFHPDA---G-----------AS----FYLSHL------ 124 (338)
Q Consensus 81 ~GgG~~lala~D~ria~~~a~f~~pe~~------------~Gl~p~~---g-----------~~----~~l~r~------ 124 (338)
.|+|+.++++||.++|++++.|+...+. +|+-+.. | .+ ..+..+
T Consensus 85 ~s~gy~lA~~aD~i~a~~~a~~g~iG~~~~~~~~~~ll~k~Gi~~~~~~~g~~K~~~~~~~~~s~~~re~~~~~l~~~~~ 164 (214)
T cd07022 85 ASAAYWIASAADRIVVTPTAGVGSIGVVASHVDQSKALEKAGLKVTLIFAGAHKVDGNPDEPLSDEARARLQAEVDALYA 164 (214)
T ss_pred hhHHHHHHhcCCEEEEcCCCeEEeeeEEEecCCHHHHHHhCCCeEEEEEcCCCccCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999987644332 2221110 0 00 001111
Q ss_pred -----------cchH-HHHHhhhCCCCCHHHHHHcCccceeccCCCh
Q 019601 125 -----------PGYL-GEYLALTGEKLNGVEMIACGLATHYTLNGRL 159 (338)
Q Consensus 125 -----------~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l 159 (338)
+... ..+++ |+.+++++|++.||||++...+++
T Consensus 165 ~f~~~V~~~R~~~~~~~~~~~--~~~~~~~~Al~~gLvD~i~~~~~~ 209 (214)
T cd07022 165 MFVAAVARNRGLSAAAVRATE--GGVFRGQEAVAAGLADAVGTLDDA 209 (214)
T ss_pred HHHHHHHHhCCCCHHHHHHhh--cCeeeHHHHHHcCCCcccCCHHHH
Confidence 1222 23444 999999999999999999865544
No 99
>cd07023 S49_Sppa_N_C Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. This subfamily contains members with either a single domain (sometimes referred to as 36K type), such as sohB peptidase, protein C and archaeal signal peptide peptidase, or an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad
Probab=99.40 E-value=2.7e-12 Score=115.11 Aligned_cols=138 Identities=18% Similarity=0.141 Sum_probs=100.5
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGIT 80 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a 80 (338)
++.+|.++|+.++.|+++++|||++. |.|+|+.... .+.+.+..+..++|||||+++|.|
T Consensus 18 ~~~~l~~~l~~a~~d~~i~~ivl~~~----s~Gg~~~~~~----------------~i~~~i~~~~~~~kpvia~v~g~~ 77 (208)
T cd07023 18 GADSLIEQLRKAREDDSVKAVVLRIN----SPGGSVVASE----------------EIYREIRRLRKAKKPVVASMGDVA 77 (208)
T ss_pred CHHHHHHHHHHHHhCCCCcEEEEEEE----CCCCCHHHHH----------------HHHHHHHHHHhcCCcEEEEECCcc
Confidence 56889999999999999999999995 8899987531 123456677788999999999999
Q ss_pred ccchhhhhhcCCeEEEeCceeEecCCCC------------cCcCCCcch------------------HHHHhhcc-----
Q 019601 81 MGCGAGISLQGMYRVVTDKTVFSNPETQ------------MGFHPDAGA------------------SFYLSHLP----- 125 (338)
Q Consensus 81 ~GgG~~lala~D~ria~~~a~f~~pe~~------------~Gl~p~~g~------------------~~~l~r~~----- 125 (338)
.|+|+.|+++||.+++++.+.|+...+. +|+-+.... ...+..++
T Consensus 78 ~s~g~~lA~aaD~i~a~~~s~~g~iG~~~~~~~~~~~l~k~Gi~~~~~~~g~~K~~~~~~~~~s~~~~e~~~~~l~~~~~ 157 (208)
T cd07023 78 ASGGYYIAAAADKIVANPTTITGSIGVIGQGPNLEELLDKLGIERDTIKSGPGKDKGSPDRPLTEEERAILQALVDDIYD 157 (208)
T ss_pred hhHHHHHHhhCCEEEECCCCeEEeCcEEEecCCHHHHHHhcCCceEEEecCCCccCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988643221 233221110 00111111
Q ss_pred ----------c--hHHHHHhhhCCCCCHHHHHHcCccceeccCCC
Q 019601 126 ----------G--YLGEYLALTGEKLNGVEMIACGLATHYTLNGR 158 (338)
Q Consensus 126 ----------g--~~a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~ 158 (338)
| .....-++.|..+++++|++.||||.+...++
T Consensus 158 ~f~~~Va~~R~~~~~~~~~~~~~~~~~a~~A~~~gLiD~i~~~~~ 202 (208)
T cd07023 158 QFVDVVAEGRGMSGERLDKLADGRVWTGRQALELGLVDELGGLDD 202 (208)
T ss_pred HHHHHHHhcCCCCHHHHHHhcCCcEEEHHHHHHcCCCcccCCHHH
Confidence 1 12234467889999999999999999986444
No 100
>TIGR00706 SppA_dom signal peptide peptidase SppA, 36K type. The member of this family from Bacillus subtilis was shown to have properties consistent with a role in degrading signal peptides after cleavage from precursor proteins, although it was not demonstrated conclusively.
Probab=99.30 E-value=2.5e-11 Score=108.82 Aligned_cols=136 Identities=15% Similarity=0.122 Sum_probs=97.5
Q ss_pred HHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCC--CCEEEEEccc
Q 019601 2 VGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFV--KPHVAILDGI 79 (338)
Q Consensus 2 ~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--kP~Iaav~G~ 79 (338)
..+|.++|+.+..|+++++|||++. |.|+++.... .+...|..++ ||||+.++|.
T Consensus 15 ~~~l~~~l~~a~~d~~i~~vvl~~~----s~Gg~~~~~~-------------------~l~~~i~~~~~~kpvia~v~g~ 71 (207)
T TIGR00706 15 PEDFDKKIKRIKDDKSIKALLLRIN----SPGGTVVASE-------------------EIYEKLKKLKAKKPVVASMGGV 71 (207)
T ss_pred HHHHHHHHHHHhhCCCccEEEEEec----CCCCCHHHHH-------------------HHHHHHHHhcCCCCEEEEECCc
Confidence 4688999999999999999999986 7888876431 2333445555 9999999999
Q ss_pred cccchhhhhhcCCeEEEeCceeEecCCCC------------cCcCC--------------CcchH----HHH--------
Q 019601 80 TMGCGAGISLQGMYRVVTDKTVFSNPETQ------------MGFHP--------------DAGAS----FYL-------- 121 (338)
Q Consensus 80 a~GgG~~lala~D~ria~~~a~f~~pe~~------------~Gl~p--------------~~g~~----~~l-------- 121 (338)
|.|+|+.|+++||.++|++++.|+...+. +|+-+ ....+ ..+
T Consensus 72 a~s~g~~la~aaD~i~a~p~a~vg~iGv~~~~~~~~~~l~k~Gv~~~~~~~g~~K~~~~~~~~~s~~~~e~~~~~l~~~~ 151 (207)
T TIGR00706 72 AASGGYYIAMAADEIVANPGTITGSIGVILQGANVEKLYEKLGIEFEVIKSGEYKDIGSPTRELTPEERDILQNLVNESY 151 (207)
T ss_pred cchHHHHHHhcCCEEEECCCCeEEeeeEEEecCCHHHHHHhCCceEEEEEcCCCcCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999887653332 23311 00000 011
Q ss_pred -------h--hccchHHHHHhhhCCCCCHHHHHHcCccceeccCCChh
Q 019601 122 -------S--HLPGYLGEYLALTGEKLNGVEMIACGLATHYTLNGRLP 160 (338)
Q Consensus 122 -------~--r~~g~~a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l~ 160 (338)
. |-+.....+-++.|+.+++++|++.||||.+...+++.
T Consensus 152 ~~f~~~va~~R~~~~~~~~~~~~~~~~~~~~A~~~gLvD~i~~~~~~~ 199 (207)
T TIGR00706 152 EQFVQVVAKGRNLPVEDVKKFADGRVFTGRQALKLRLVDKLGTEDDAL 199 (207)
T ss_pred HHHHHHHHhcCCCCHHHHHHHhcCCcccHHHHHHcCCCcccCCHHHHH
Confidence 1 11222223345789999999999999999998766654
No 101
>TIGR00705 SppA_67K signal peptide peptidase SppA, 67K type. E. coli SohB, which is most closely homologous to the C-terminal duplication of SppA, is predicted to perform a similar function of small peptide degradation, but in the periplasm. Many prokaryotes have a single SppA/SohB homolog that may perform the function of either or both.
Probab=99.29 E-value=1.8e-11 Score=125.29 Aligned_cols=133 Identities=20% Similarity=0.205 Sum_probs=100.8
Q ss_pred HHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccccc
Q 019601 3 GRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMG 82 (338)
Q Consensus 3 ~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a~G 82 (338)
+.+.+.|+++..|++|++|||+-. |.|++.... ..+.+.+..+...+||||+.++|.|.+
T Consensus 332 ~~~~~~l~~a~~D~~VkaIVLrin----SpGGs~~as----------------e~i~~~i~~~~~~gKPVva~~~g~aaS 391 (584)
T TIGR00705 332 DTVAALLRVARSDPDIKAVVLRIN----SPGGSVFAS----------------EIIRRELARAQARGKPVIVSMGAMAAS 391 (584)
T ss_pred HHHHHHHHHHhhCCCceEEEEEec----CCCCCHHHH----------------HHHHHHHHHHHhCCCcEEEEECCcccc
Confidence 567889999999999999999976 344443321 111233444567789999999999999
Q ss_pred chhhhhhcCCeEEEeCceeE------ecCC------CCcCcCCCcchHHHHhh---------------------------
Q 019601 83 CGAGISLQGMYRVVTDKTVF------SNPE------TQMGFHPDAGASFYLSH--------------------------- 123 (338)
Q Consensus 83 gG~~lala~D~ria~~~a~f------~~pe------~~~Gl~p~~g~~~~l~r--------------------------- 123 (338)
||..++++||.++|++.+.+ +.+. .++|+.+....+..+..
T Consensus 392 ggY~iA~aaD~I~a~p~t~~GSIGv~~~~~~~~~~l~klGi~~~~~~t~~~~~~s~~~~~t~~~~~~~~~~l~~~y~~F~ 471 (584)
T TIGR00705 392 GGYWIASAADYIVASPNTITGSIGVFSVLPTFENSLDRIGVHVDGVSTHELANVSLLRPLTAEDQAIMQLSVEAGYRRFL 471 (584)
T ss_pred HHHHHHHhCCEEEECCCCeeecCEEEEEccCHHHHHHhcCCceEEEeccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998876 5553 57888876555443321
Q ss_pred -------ccchHHHHHhhhCCCCCHHHHHHcCccceecc
Q 019601 124 -------LPGYLGEYLALTGEKLNGVEMIACGLATHYTL 155 (338)
Q Consensus 124 -------~~g~~a~~l~ltG~~~~a~eA~~~GLv~~vv~ 155 (338)
-+.....+.+.+|+.+++++|+++||||++-.
T Consensus 472 ~~Va~~R~l~~e~v~~ia~Grv~tg~eA~~~GLVD~ig~ 510 (584)
T TIGR00705 472 SVVSAGRNLTPTQVDKVAQGRVWTGEDAVSNGLVDALGG 510 (584)
T ss_pred HHHHhhCCCCHHHHHHHHhCCCcCHHHHHHcCCcccCCC
Confidence 12222677889999999999999999999954
No 102
>cd07018 S49_SppA_67K_type Signal peptide peptidase A (SppA) 67K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 67K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily contain an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown that members in this subfamily, mostly bacterial, are serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys
Probab=99.19 E-value=1.2e-10 Score=105.39 Aligned_cols=138 Identities=14% Similarity=0.003 Sum_probs=100.1
Q ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccc
Q 019601 1 MVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGIT 80 (338)
Q Consensus 1 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a 80 (338)
++.+|.+.|+++..|++|++|||+..+..| ++.++.++. +.+..+...+|||||.++| |
T Consensus 30 ~~~~l~~~l~~a~~d~~ik~vvL~~~s~gg-~~~~~~el~-------------------~~i~~~~~~~kpVia~~~~-~ 88 (222)
T cd07018 30 SLRDLLEALEKAAEDDRIKGIVLDLDGLSG-GLAKLEELR-------------------QALERFRASGKPVIAYADG-Y 88 (222)
T ss_pred cHHHHHHHHHHHhcCCCeEEEEEECCCCCC-CHHHHHHHH-------------------HHHHHHHHhCCeEEEEeCC-C
Confidence 367899999999999999999999998666 666666552 3344455679999999998 8
Q ss_pred ccchhhhhhcCCeEEEeCceeEecCCCCc------------CcCCC---------cchHHH-----------Hhhc----
Q 019601 81 MGCGAGISLQGMYRVVTDKTVFSNPETQM------------GFHPD---------AGASFY-----------LSHL---- 124 (338)
Q Consensus 81 ~GgG~~lala~D~ria~~~a~f~~pe~~~------------Gl~p~---------~g~~~~-----------l~r~---- 124 (338)
.+||..|+++||.+++++.+.|+...+.. |+-+. .+.++. +...
T Consensus 89 ~sggy~lasaad~I~a~p~~~vg~iGv~~~~~~~~~ll~klGv~~~~~~~G~~K~~~~~~~~~~~s~~~r~~~~~~l~~~ 168 (222)
T cd07018 89 SQGQYYLASAADEIYLNPSGSVELTGLSAETLFFKGLLDKLGVEVQVFRVGEYKSAVEPFTRDDMSPEAREQTQALLDSL 168 (222)
T ss_pred CchhhhhhhhCCEEEECCCceEEeeccchhhhhHHHHHHHcCCcEEEEEEeccccccchhhcccCCHHHHHHHHHHHHHH
Confidence 89999999999999999999998854332 22111 111110 0000
Q ss_pred -------------cchHHHHHhhhCCCCCHHHHHHcCccceeccCCCh
Q 019601 125 -------------PGYLGEYLALTGEKLNGVEMIACGLATHYTLNGRL 159 (338)
Q Consensus 125 -------------~g~~a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l 159 (338)
+.....+-+..|+.+++++|++.||||++...+++
T Consensus 169 ~~~f~~~Va~~R~~~~~~~~~~~~~~~~~~~~A~~~GLvD~i~~~~e~ 216 (222)
T cd07018 169 WDQYLADVAASRGLSPDALEALIDLGGDSAEEALEAGLVDGLAYRDEL 216 (222)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHcCCcHHHHHHHCCCCCcCCcHHHH
Confidence 11222334456999999999999999999966554
No 103
>cd07021 Clp_protease_NfeD_like Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease. Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentiall
Probab=99.15 E-value=3.6e-10 Score=98.80 Aligned_cols=126 Identities=18% Similarity=0.161 Sum_probs=90.9
Q ss_pred HHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccccc
Q 019601 3 GRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMG 82 (338)
Q Consensus 3 ~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a~G 82 (338)
.-|.++|+.++.++ +..|+|.=. |.|+++.... .+...|..+++|||+.|+|.|.+
T Consensus 16 ~~l~~~l~~a~~~~-~~~ivl~in----spGG~v~~~~-------------------~I~~~l~~~~~pvva~V~g~AaS 71 (178)
T cd07021 16 AFVERALKEAKEEG-ADAVVLDID----TPGGRVDSAL-------------------EIVDLILNSPIPTIAYVNDRAAS 71 (178)
T ss_pred HHHHHHHHHHHhCC-CCeEEEEEE----CcCCCHHHHH-------------------HHHHHHHhCCCCEEEEECCchHH
Confidence 45678898888876 666666555 5566665432 34556778999999999999999
Q ss_pred chhhhhhcCCeEEEeCceeEecCCCCcCcCCCcch--------HHH------HhhccchH---HHHHhhhC---------
Q 019601 83 CGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGA--------SFY------LSHLPGYL---GEYLALTG--------- 136 (338)
Q Consensus 83 gG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~--------~~~------l~r~~g~~---a~~l~ltG--------- 136 (338)
+|+.++++||++++++++.|+.+++-. ..|+ ... ++..-|+. +..|+-..
T Consensus 72 aG~~ia~a~d~i~m~p~a~iG~~~~v~----~~~~~~~~~K~~~~~~~~~~~~A~~~gr~~~~a~~mv~~~~~v~~~~~~ 147 (178)
T cd07021 72 AGALIALAADEIYMAPGATIGAAEPIP----GDGNGAADEKVQSYWRAKMRAAAEKKGRDPDIAEAMVDKDIEVPGVGIK 147 (178)
T ss_pred HHHHHHHhCCeEEECCCCeEecCeeEc----CCCccchhHHHHHHHHHHHHHHHHHhCCCHHHHHHHhhhhccccccccc
Confidence 999999999999999999999885542 2222 111 22223433 34444433
Q ss_pred ----CCCCHHHHHHcCccceeccC
Q 019601 137 ----EKLNGVEMIACGLATHYTLN 156 (338)
Q Consensus 137 ----~~~~a~eA~~~GLv~~vv~~ 156 (338)
-.++++||++.|+++.+.++
T Consensus 148 ~~~~l~lta~eA~~~g~~d~ia~~ 171 (178)
T cd07021 148 GGELLTLTADEALKVGYAEGIAGS 171 (178)
T ss_pred ccceeeeCHHHHHHhCCeEEEECC
Confidence 27999999999999999875
No 104
>cd07013 S14_ClpP Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease. Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. Additionally, they are implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of proteas
Probab=98.65 E-value=3.8e-07 Score=78.62 Aligned_cols=129 Identities=17% Similarity=0.096 Sum_probs=87.3
Q ss_pred HHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEccccc
Q 019601 2 VGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITM 81 (338)
Q Consensus 2 ~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a~ 81 (338)
.+.+.+.|..++.++.++.|+|.=+ |.|+++..- ..++..|..+++||++.+.|.|.
T Consensus 14 ~~~~~~~L~~l~~~~~~~~i~l~In----SpGG~v~~~-------------------~~i~~~i~~~~~~v~~~~~g~aa 70 (162)
T cd07013 14 ANQFAAQLLFLGAVNPEKDIYLYIN----SPGGDVFAG-------------------MAIYDTIKFIKADVVTIIDGLAA 70 (162)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEEE----CCCCcHHHH-------------------HHHHHHHHhcCCCceEEEEeehh
Confidence 4567888888888877776666555 555655432 13445566788999999999999
Q ss_pred cchhhhhhcCC--eEEEeCceeEecCCCCcCcCCCcchHH---------------HHhhccc--hH-HHHHhhhCCCCCH
Q 019601 82 GCGAGISLQGM--YRVVTDKTVFSNPETQMGFHPDAGASF---------------YLSHLPG--YL-GEYLALTGEKLNG 141 (338)
Q Consensus 82 GgG~~lala~D--~ria~~~a~f~~pe~~~Gl~p~~g~~~---------------~l~r~~g--~~-a~~l~ltG~~~~a 141 (338)
++|..|++++| .|++.++++|.+....-|......-.. .+.+.-| .. ...++-.+..++|
T Consensus 71 S~~~~i~~a~~~g~r~~~p~a~~~ih~~~~~~~g~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~~~i~~~~~~~~~~sa 150 (162)
T cd07013 71 SMGSVIAMAGAKGKRFILPNAMMMIHQPWGGTLGDATDMRIYADLLLKVEGNLVSAYAHKTGQSEEELHADLERDTWLSA 150 (162)
T ss_pred hHHHHHHHcCCCCcEEEecCEEEEEccCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHcCCccccH
Confidence 99999999999 688888888887654322211100000 1111123 22 4556666677799
Q ss_pred HHHHHcCcccee
Q 019601 142 VEMIACGLATHY 153 (338)
Q Consensus 142 ~eA~~~GLv~~v 153 (338)
+||+++||||++
T Consensus 151 ~eA~~~GliD~i 162 (162)
T cd07013 151 REAVEYGFADTI 162 (162)
T ss_pred HHHHHcCCCCcC
Confidence 999999999975
No 105
>cd07015 Clp_protease_NfeD Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease. Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentially cle
Probab=98.59 E-value=5.7e-07 Score=78.11 Aligned_cols=130 Identities=13% Similarity=0.170 Sum_probs=94.4
Q ss_pred HHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEc---cc
Q 019601 3 GRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILD---GI 79 (338)
Q Consensus 3 ~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~---G~ 79 (338)
.-|.+.++.++.+ .++.|+|.=+ |-|+++.... .+...|...++||++.|+ |.
T Consensus 16 ~~l~~~l~~A~~~-~~~~i~l~in----SPGG~v~~~~-------------------~I~~~i~~~~~pvv~~v~p~g~~ 71 (172)
T cd07015 16 DQFDRYITIAEQD-NAEAIIIELD----TPGGRADAAG-------------------NIVQRIQQSKIPVIIYVYPPGAS 71 (172)
T ss_pred HHHHHHHHHHhcC-CCCeEEEEEE----CCCCCHHHHH-------------------HHHHHHHhcCcCEEEEEecCCCe
Confidence 3567788888765 4677777665 5666666431 234455678999999999 99
Q ss_pred cccchhhhhhcCCeEEEeCceeEecCCCCcCcCCC----c-c---hHHHHh------hccc--hH-HHHHhhhCCCCCHH
Q 019601 80 TMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPD----A-G---ASFYLS------HLPG--YL-GEYLALTGEKLNGV 142 (338)
Q Consensus 80 a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~----~-g---~~~~l~------r~~g--~~-a~~l~ltG~~~~a~ 142 (338)
|..+|..++++||.+++.+++.++...+-.|..+. . . ....+. +.-| .. +..++.....++++
T Consensus 72 AaSag~~I~~a~~~i~m~p~s~iG~~~pi~~~g~~~~~~~~~~ki~~~~~~~~r~~A~~~Gr~~~~a~~~v~~~~~lta~ 151 (172)
T cd07015 72 AASAGTYIALGSHLIAMAPGTSIGACRPILGYSQNGSIIEAPPKITNYFIAYIKSLAQESGRNATIAEEFITKDLSLTPE 151 (172)
T ss_pred ehhHHHHHHHhcCceEECCCCEEEEccccccCCCCCccccchHHHHHHHHHHHHHHHHHHCcCHHHHHHHHHhhcCcCHH
Confidence 99999999999999999999999998875443220 0 0 011111 1223 23 67777888999999
Q ss_pred HHHHcCccceeccC
Q 019601 143 EMIACGLATHYTLN 156 (338)
Q Consensus 143 eA~~~GLv~~vv~~ 156 (338)
||++.|+++.++.+
T Consensus 152 EA~~~G~iD~ia~~ 165 (172)
T cd07015 152 EALKYGVIEVVARD 165 (172)
T ss_pred HHHHcCCceeeeCC
Confidence 99999999999976
No 106
>PRK00277 clpP ATP-dependent Clp protease proteolytic subunit; Reviewed
Probab=98.51 E-value=6.6e-07 Score=79.77 Aligned_cols=96 Identities=16% Similarity=0.026 Sum_probs=65.7
Q ss_pred HHHHHhhCCCCEEEEEccccccchhhhhhcCC--eEEEeCceeEecCCCCcCcCCCcch---------------HHHHhh
Q 019601 61 FVYLQGTFVKPHVAILDGITMGCGAGISLQGM--YRVVTDKTVFSNPETQMGFHPDAGA---------------SFYLSH 123 (338)
Q Consensus 61 ~~~~i~~~~kP~Iaav~G~a~GgG~~lala~D--~ria~~~a~f~~pe~~~Gl~p~~g~---------------~~~l~r 123 (338)
++..+...+.||++.+.|.|.++|..|+++++ .|++.++++|.+....-|......- ...+..
T Consensus 81 I~d~i~~~~~~v~t~~~G~aaS~a~~I~~ag~~~~r~~~p~s~imih~p~~~~~G~a~di~~~a~~l~~~~~~~~~~~a~ 160 (200)
T PRK00277 81 IYDTMQFIKPDVSTICIGQAASMGAFLLAAGAKGKRFALPNSRIMIHQPLGGFQGQATDIEIHAREILKLKKRLNEILAE 160 (200)
T ss_pred HHHHHHhcCCCEEEEEEeEeccHHHHHHhcCCCCCEEEcCCceEEeccCcccccCChhHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456677889999999999999999998754 5777777777766554222110000 011222
Q ss_pred ccch--H-HHHHhhhCCCCCHHHHHHcCccceeccC
Q 019601 124 LPGY--L-GEYLALTGEKLNGVEMIACGLATHYTLN 156 (338)
Q Consensus 124 ~~g~--~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~ 156 (338)
.-|. . ...++-.+..++|+||++.||+|+|+..
T Consensus 161 ~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~Ii~~ 196 (200)
T PRK00277 161 HTGQPLEKIEKDTDRDNFMSAEEAKEYGLIDEVLTK 196 (200)
T ss_pred HHCcCHHHHHHHhhCCccccHHHHHHcCCccEEeec
Confidence 2343 2 4556667789999999999999999975
No 107
>PRK12553 ATP-dependent Clp protease proteolytic subunit; Reviewed
Probab=98.46 E-value=1.3e-06 Score=78.29 Aligned_cols=129 Identities=14% Similarity=0.005 Sum_probs=88.1
Q ss_pred HHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccccc
Q 019601 3 GRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMG 82 (338)
Q Consensus 3 ~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a~G 82 (338)
+.+...|..++..+..+.|+|.=+ |.|+++..- ..++..|..++.||++.+.|.|.+
T Consensus 50 ~~i~~~L~~l~~~~~~~~I~l~IN----SpGG~v~~g-------------------~~I~d~i~~~~~~v~t~~~G~aaS 106 (207)
T PRK12553 50 NDVMAQLLVLESIDPDRDITLYIN----SPGGSVTAG-------------------DAIYDTIQFIRPDVQTVCTGQAAS 106 (207)
T ss_pred HHHHHHHHHHHhCCCCCCEEEEEe----CCCCcHHHH-------------------HHHHHHHHhcCCCcEEEEEeehhh
Confidence 456667777765543333333333 344554432 134555667788999999999999
Q ss_pred chhhhhhcCC--eEEEeCceeEecCCCCc-CcCCCcchH------------------HHHhhccch--H-HHHHhhhCCC
Q 019601 83 CGAGISLQGM--YRVVTDKTVFSNPETQM-GFHPDAGAS------------------FYLSHLPGY--L-GEYLALTGEK 138 (338)
Q Consensus 83 gG~~lala~D--~ria~~~a~f~~pe~~~-Gl~p~~g~~------------------~~l~r~~g~--~-a~~l~ltG~~ 138 (338)
.|.-|+++|| .|++.+++.|.+.+... |. ..|-+ ..+...-|. . ..+++-.+..
T Consensus 107 aa~lI~~ag~~~~R~~~p~s~imiH~p~~~~~--~~G~a~d~~~~~~~l~~~~~~~~~~ya~~tg~~~e~i~~~~~~~~~ 184 (207)
T PRK12553 107 AGAVLLAAGTPGKRFALPNARILIHQPSLGGG--IRGQASDLEIQAREILRMRERLERILAEHTGQSVEKIRKDTDRDKW 184 (207)
T ss_pred HHHHHHHcCCcCcEEECCCchhhhcCccccCC--CccCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhcCcc
Confidence 9999999999 59999999999988754 21 11111 122333333 3 5666678899
Q ss_pred CCHHHHHHcCccceeccC
Q 019601 139 LNGVEMIACGLATHYTLN 156 (338)
Q Consensus 139 ~~a~eA~~~GLv~~vv~~ 156 (338)
++|+||+++||||+|+++
T Consensus 185 lta~EA~e~GliD~I~~~ 202 (207)
T PRK12553 185 LTAEEAKDYGLVDQIITS 202 (207)
T ss_pred ccHHHHHHcCCccEEcCc
Confidence 999999999999999975
No 108
>KOG1683 consensus Hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase [Lipid transport and metabolism]
Probab=98.37 E-value=4e-07 Score=86.31 Aligned_cols=151 Identities=15% Similarity=0.025 Sum_probs=123.0
Q ss_pred HHHHHHHHHHHhcCCCcEEEEEEeCC-CCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccc
Q 019601 2 VGRLKRLYESWEENPDIGFVLMKGAG-RAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGIT 80 (338)
Q Consensus 2 ~~eL~~~l~~~~~d~~v~~vVl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a 80 (338)
..+|..-++.+..+..+++..+|+.. +.|++|.|..+... +.......+.-.+.+++...+.++.|+.+++||++
T Consensus 84 k~~l~~~le~v~~~~~i~gsntSs~~~~~isa~ld~~e~vv----g~h~fspa~~m~LlEii~~~~tS~~~iA~Ain~~~ 159 (380)
T KOG1683|consen 84 KHELFKSLEKVEPPKCIRGSNTSSLDINVISAGLDRPEMVV----GMHFFSPAHWMQLLEIILALYTSKLTIATAINGGS 159 (380)
T ss_pred HHHHHHHHHhhcCCcceeeeccccCChHHHhhccCchhhhc----cccccCHHHHHHHHHHHHhcCCCchHHHHHHhccc
Confidence 45777888888888889999999988 99999999998764 33344455667788999999999999999999999
Q ss_pred ccch--hhhhhcCCeEEEe--CceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhhCCCCCHHHHHHcCccceecc
Q 019601 81 MGCG--AGISLQGMYRVVT--DKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYTL 155 (338)
Q Consensus 81 ~GgG--~~lala~D~ria~--~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~ 155 (338)
--|+ +-++.+|+|++.. ..-..+..+...++..+..-.-.+....|.+ +-+-+--|.-|+..||.+-|+++.+.|
T Consensus 160 ~~gk~~vvVg~c~gf~v~r~l~~y~~~~~~~l~e~g~~p~~iD~~~t~fGf~~g~~~L~d~~gfdv~eal~~gl~~~~~~ 239 (380)
T KOG1683|consen 160 PAGKLPVVVGNCCGFRVNRLLPPYTIGLNELLLEIGADPWLIDSLITKFGFRVGERALADGVGFDVAEALAVGLGDEIGP 239 (380)
T ss_pred ccCCccEEeccCCceEEEecccHHHHHHHHHHHHcCCCHHHHHHHHHhcCccccHHHHhhccCccHHHHHhhccchhccc
Confidence 9998 9999999999998 4455577788877533322333355667888 788888899999999999999999999
Q ss_pred C
Q 019601 156 N 156 (338)
Q Consensus 156 ~ 156 (338)
.
T Consensus 240 r 240 (380)
T KOG1683|consen 240 R 240 (380)
T ss_pred h
Confidence 5
No 109
>PRK10949 protease 4; Provisional
Probab=98.35 E-value=4.4e-06 Score=86.09 Aligned_cols=138 Identities=17% Similarity=0.143 Sum_probs=92.9
Q ss_pred HHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccccc
Q 019601 3 GRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMG 82 (338)
Q Consensus 3 ~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a~G 82 (338)
+.+.+.|+++..|++|++|||+=. |-|+..... +.+.+.+..+....||||+.+.|.|.-
T Consensus 350 ~~~~~~l~~a~~D~~vkaVvLrIn----SpGGs~~as----------------e~i~~~i~~~r~~gKPVvas~~~~aAS 409 (618)
T PRK10949 350 DTTAAQIRDARLDPKVKAIVLRVN----SPGGSVTAS----------------EVIRAELAAARAAGKPVVVSMGGMAAS 409 (618)
T ss_pred HHHHHHHHHHHhCCCCcEEEEEec----CCCCcHHHH----------------HHHHHHHHHHHhcCCcEEEEECCCCcc
Confidence 457889999999999999999987 555544321 223334444556789999999999999
Q ss_pred chhhhhhcCCeEEEeCceeEecCCC------------CcCcCCCcchH-----------------HHHhh----------
Q 019601 83 CGAGISLQGMYRVVTDKTVFSNPET------------QMGFHPDAGAS-----------------FYLSH---------- 123 (338)
Q Consensus 83 gG~~lala~D~ria~~~a~f~~pe~------------~~Gl~p~~g~~-----------------~~l~r---------- 123 (338)
||.-++++||.++|.+.+..+.-.+ ++|+-.....+ ..+..
T Consensus 410 ggY~iA~aad~I~a~p~t~tGSIGV~~~~~~~~~ll~klGV~~~~~~~~~~~~~~~~~~~s~e~~~~~q~~ld~~y~~F~ 489 (618)
T PRK10949 410 GGYWISTPANYIVASPSTLTGSIGIFGVINTVENSLDSIGVHTDGVSTSPLADVSITKALPPEFQQMMQLSIENGYKRFI 489 (618)
T ss_pred HHHHHHHhcCEEEECCCCceeeCcEEEEccCHHHHHHhcCCceeEEeccccCCccccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999655443221 23332211000 00101
Q ss_pred -------ccchHHHHHhhhCCCCCHHHHHHcCccceeccCCChh
Q 019601 124 -------LPGYLGEYLALTGEKLNGVEMIACGLATHYTLNGRLP 160 (338)
Q Consensus 124 -------~~g~~a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l~ 160 (338)
.+...-.+-+..|+.+++++|++.||||++-.-++..
T Consensus 490 ~~Va~~R~~~~~~v~~ia~Grv~tg~~A~~~GLVD~lG~~~~ai 533 (618)
T PRK10949 490 TLVADSRHKTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAV 533 (618)
T ss_pred HHHHhhCCCCHHHHHHHhcCCcccHHHHHHcCCCccCCCHHHHH
Confidence 1122223345689999999999999999997755543
No 110
>cd07017 S14_ClpP_2 Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease. Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of protease activ
Probab=98.34 E-value=3.9e-06 Score=72.90 Aligned_cols=128 Identities=16% Similarity=0.043 Sum_probs=87.1
Q ss_pred HHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccccc
Q 019601 3 GRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMG 82 (338)
Q Consensus 3 ~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a~G 82 (338)
..+...|..+..++..+.|+|.=+ |.|+|+..- ..++..+..++.||++.+.|.|.+
T Consensus 24 ~~i~~~l~~~~~~~~~~~i~l~in----SpGG~v~~~-------------------~~i~~~l~~~~~~v~t~~~g~aaS 80 (171)
T cd07017 24 NLIIAQLLYLESEDPKKPIYLYIN----SPGGSVTAG-------------------LAIYDTMQYIKPPVSTICLGLAAS 80 (171)
T ss_pred HHHHHHHHHHHccCCCCceEEEEE----CCCCCHHHH-------------------HHHHHHHHhcCCCEEEEEEeEehh
Confidence 456777777777655444444433 444554432 123344556789999999999999
Q ss_pred chhhhhhcCC--eEEEeCceeEecCCCCcCcCCCcch---------------HHHHhhccc--hH-HHHHhhhCCCCCHH
Q 019601 83 CGAGISLQGM--YRVVTDKTVFSNPETQMGFHPDAGA---------------SFYLSHLPG--YL-GEYLALTGEKLNGV 142 (338)
Q Consensus 83 gG~~lala~D--~ria~~~a~f~~pe~~~Gl~p~~g~---------------~~~l~r~~g--~~-a~~l~ltG~~~~a~ 142 (338)
+|..+++++| .|++.+++.|.+.+...+..-...- ...+....| .. ...++-.+..++|+
T Consensus 81 ~~~~i~~~g~~~~r~~~~~a~~~~h~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~tg~~~~~i~~~~~~~~~lta~ 160 (171)
T cd07017 81 MGALLLAAGTKGKRYALPNSRIMIHQPLGGAGGQASDIEIQAKEILRLRRRLNEILAKHTGQPLEKIEKDTDRDRYMSAE 160 (171)
T ss_pred HHHHHHHcCCCCCEEEccchHHHHcCCCccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhhCCccccHH
Confidence 9999999999 7999999999999877654322100 001111122 22 45666688999999
Q ss_pred HHHHcCcccee
Q 019601 143 EMIACGLATHY 153 (338)
Q Consensus 143 eA~~~GLv~~v 153 (338)
||+++||+|+|
T Consensus 161 EA~e~GiiD~V 171 (171)
T cd07017 161 EAKEYGLIDKI 171 (171)
T ss_pred HHHHcCCCccC
Confidence 99999999985
No 111
>PRK14512 ATP-dependent Clp protease proteolytic subunit; Provisional
Probab=98.19 E-value=1.5e-05 Score=70.84 Aligned_cols=97 Identities=14% Similarity=0.007 Sum_probs=69.2
Q ss_pred HHHHHHhhCCCCEEEEEccccccchhhhhhcCCe--EEEeCceeEecCCCCcCcCCCcchH---------------HHHh
Q 019601 60 QFVYLQGTFVKPHVAILDGITMGCGAGISLQGMY--RVVTDKTVFSNPETQMGFHPDAGAS---------------FYLS 122 (338)
Q Consensus 60 ~~~~~i~~~~kP~Iaav~G~a~GgG~~lala~D~--ria~~~a~f~~pe~~~Gl~p~~g~~---------------~~l~ 122 (338)
.++..|..++.||++.+.|.|.+.|.-|+++||- |++.++++|.+....-|+.....-. ..+.
T Consensus 72 aI~d~i~~~~~~V~t~v~G~AaSaaslIl~ag~~~~R~~~p~s~imiHqP~~~~~G~a~di~~~a~~l~~~~~~i~~~~a 151 (197)
T PRK14512 72 AIFNMIRFVKPKVFTIGVGLVASAAALIFLAAKKESRFSLPNARYLLHQPLSGFKGVATDIEIYANELNKVKSELNDIIA 151 (197)
T ss_pred HHHHHHHhCCCCEEEEEEeeeHhHHHHHHhcCCcCceeECCCCcEEEEcCccccccCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455566788999999999999999999999985 9999999988776654331111100 0111
Q ss_pred hccch--H-HHHHhhhCCCCCHHHHHHcCccceeccC
Q 019601 123 HLPGY--L-GEYLALTGEKLNGVEMIACGLATHYTLN 156 (338)
Q Consensus 123 r~~g~--~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~ 156 (338)
..-|. . ...++-....++|+||+++||+++|++.
T Consensus 152 ~~tg~~~~~i~~~~~~d~~lta~EA~~yGliD~I~~~ 188 (197)
T PRK14512 152 KETGQELDKVEKDTDRDFWLDSSSAVKYGLVFEVVET 188 (197)
T ss_pred HHhCcCHHHHHHhhhcCcccCHHHHHHcCCccEeecC
Confidence 12232 2 4555556688999999999999999976
No 112
>CHL00198 accA acetyl-CoA carboxylase carboxyltransferase alpha subunit; Provisional
Probab=98.16 E-value=0.00012 Score=69.34 Aligned_cols=92 Identities=15% Similarity=0.047 Sum_probs=66.6
Q ss_pred HHHHHHHHHHhhCCCCEEEEEccccccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchHHHHHhhh
Q 019601 56 ETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYLGEYLALT 135 (338)
Q Consensus 56 ~~~~~~~~~i~~~~kP~Iaav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~a~~l~lt 135 (338)
..+.+.+..+.....|+|+.|-|.|.|||......||++++.+++.++.- .|.+ .+..|.+-.... . -+-.
T Consensus 179 ~aiar~l~~~a~~~VP~IsVViGeggsGGAlal~~aD~V~m~e~a~~sVi------sPEg-~a~Il~~d~~~a-~-~aA~ 249 (322)
T CHL00198 179 EAIAVNLREMFSFEVPIICTIIGEGGSGGALGIGIGDSIMMLEYAVYTVA------TPEA-CAAILWKDSKKS-L-DAAE 249 (322)
T ss_pred HHHHHHHHHHHcCCCCEEEEEeCcccHHHHHhhhcCCeEEEeCCeEEEec------CHHH-HHHHHhcchhhH-H-HHHH
Confidence 44556666778899999999999998888766667999999999987642 2444 444444432222 1 1223
Q ss_pred CCCCCHHHHHHcCccceeccC
Q 019601 136 GEKLNGVEMIACGLATHYTLN 156 (338)
Q Consensus 136 G~~~~a~eA~~~GLv~~vv~~ 156 (338)
.-.++|+++++.|+||.|+|.
T Consensus 250 ~~~ita~dL~~~giiD~ii~E 270 (322)
T CHL00198 250 ALKITSEDLKVLGIIDEIIPE 270 (322)
T ss_pred HcCCCHHHHHhCCCCeEeccC
Confidence 358999999999999999985
No 113
>PF00574 CLP_protease: Clp protease; InterPro: IPR001907 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to the MEROPS peptidase family S14 (ClpP endopeptidase family, clan SK). ClpP is an ATP-dependent protease that cleaves a number of proteins, such as casein and albumin []. It exists as a heterodimer of ATP-binding regulatory A and catalytic P subunits, both of which are required for effective levels of protease activity in the presence of ATP [], although the P subunit alone does possess some catalytic activity. This family of sequences represent the P subunit. Proteases highly similar to ClpP have been found to be encoded in the genome of bacteria, metazoa, some viruses and in the chloroplast of plants. A number of the proteins in this family are classified as non-peptidase homologues as they have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for catalytic activity. ; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2ZL3_L 2ZL0_F 2ZL2_M 2ZL4_C 1TG6_D 2F6I_D 3V5I_b 3V5E_M 3QWD_D 2DEO_A ....
Probab=98.15 E-value=5.5e-06 Score=72.56 Aligned_cols=97 Identities=15% Similarity=0.096 Sum_probs=69.1
Q ss_pred HHHHHHhhCCCCEEEEEccccccchhhhhhcCCe--EEEeCceeEecCCCCcCcCCCcchH---------------HHHh
Q 019601 60 QFVYLQGTFVKPHVAILDGITMGCGAGISLQGMY--RVVTDKTVFSNPETQMGFHPDAGAS---------------FYLS 122 (338)
Q Consensus 60 ~~~~~i~~~~kP~Iaav~G~a~GgG~~lala~D~--ria~~~a~f~~pe~~~Gl~p~~g~~---------------~~l~ 122 (338)
.+...|..++.|+++.+.|.|.+.|..++++|+. |++.+++.|.+.+...+..-...-. ..+.
T Consensus 65 ~i~~~i~~~~~~v~t~~~G~aaSaa~~i~~ag~~~~R~~~~~s~~m~H~p~~~~~g~~~~l~~~~~~l~~~~~~~~~~~~ 144 (182)
T PF00574_consen 65 AIYDAIRSSKAPVTTVVLGLAASAATLIFLAGDKGKRYASPNSRFMIHQPSTGSGGNASELREQAKELEKLNERIANIYA 144 (182)
T ss_dssp HHHHHHHHSSSEEEEEEEEEEETHHHHHHHTSSTTTEEE-TT-EEEES-CEEEEEEEHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCeEEEEeCccccceehhhhcCCcCceeeeecCEEEeecceeecccccchhHHHHHHHHHHHHHHHHHHH
Confidence 3455677889999999999999999999999999 8999999999999876653211110 0011
Q ss_pred hccch--H-HHHHhhhCCCCCHHHHHHcCccceeccC
Q 019601 123 HLPGY--L-GEYLALTGEKLNGVEMIACGLATHYTLN 156 (338)
Q Consensus 123 r~~g~--~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~ 156 (338)
...|. . ..+++-....++|+||+++||||+|+.+
T Consensus 145 ~~tg~~~~~i~~~~~~~~~l~a~EA~~~GiiD~I~~~ 181 (182)
T PF00574_consen 145 ERTGLSKEEIEELMDRDTWLSAEEALEYGIIDEIIES 181 (182)
T ss_dssp HHHTS-HHHHHHHCSSTEEEEHHHHHHHTSSSEEESS
T ss_pred HHhCCcHHHHHHHHhCCccccHHHHHHcCCCCEeccC
Confidence 11122 2 3555556677899999999999999864
No 114
>PRK12319 acetyl-CoA carboxylase subunit alpha; Provisional
Probab=98.14 E-value=2.8e-05 Score=71.69 Aligned_cols=91 Identities=15% Similarity=0.091 Sum_probs=68.7
Q ss_pred HHHHHHHHHHhhCCCCEEEEEccccccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccch-H-HHHHh
Q 019601 56 ETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGY-L-GEYLA 133 (338)
Q Consensus 56 ~~~~~~~~~i~~~~kP~Iaav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~-~-a~~l~ 133 (338)
+.+.+.+..+.....|+|+.|-|.|.|||......||++++.+++.++. .++-|.+..+.+-... . +.+.+
T Consensus 123 ~~ia~~~~~~s~~~VP~IsVI~G~~~gGgA~a~~~~D~v~m~~~a~~~v-------~~pe~~a~il~~~~~~a~~aa~~~ 195 (256)
T PRK12319 123 EAIARNLMEMSDLKVPIIAIIIGEGGSGGALALAVADQVWMLENTMYAV-------LSPEGFASILWKDGSRATEAAELM 195 (256)
T ss_pred HHHHHHHHHHhCCCCCEEEEEeCCcCcHHHHHhhcCCEEEEecCceEEE-------cCHHHHHHHHhcCcccHHHHHHHc
Confidence 4556667777889999999999999999888888999999999987763 2333344444433222 2 44443
Q ss_pred hhCCCCCHHHHHHcCccceeccCC
Q 019601 134 LTGEKLNGVEMIACGLATHYTLNG 157 (338)
Q Consensus 134 ltG~~~~a~eA~~~GLv~~vv~~~ 157 (338)
.+++.++.+.|+||.|+++.
T Consensus 196 ----~~~a~~l~~~g~iD~ii~e~ 215 (256)
T PRK12319 196 ----KITAGELLEMGVVDKVIPEH 215 (256)
T ss_pred ----CCCHHHHHHCCCCcEecCCC
Confidence 77999999999999999864
No 115
>TIGR00493 clpP ATP-dependent Clp protease, proteolytic subunit ClpP. This model for the proteolytic subunit ClpP has been rebuilt to a higher stringency. In every bacterial genome with the ClpXP machine, a ClpP protein will be found that scores with this model. In general, this ClpP member will be encoded adjacent to the clpX gene, as were all examples used in the seed alignment. A large fraction of genomes have one or more additional ClpP paralogs, sometimes encoded nearby and sometimes elsewhere. The stringency of the trusted cutoff used here excludes the more divergent ClpP paralogs from being called authentic ClpP by this model.
Probab=98.12 E-value=3.2e-05 Score=68.43 Aligned_cols=95 Identities=15% Similarity=-0.035 Sum_probs=67.4
Q ss_pred HHHHHhhCCCCEEEEEccccccchhhhhhcCC--eEEEeCceeEecCCCCcCcCCCcchH---------------HHHhh
Q 019601 61 FVYLQGTFVKPHVAILDGITMGCGAGISLQGM--YRVVTDKTVFSNPETQMGFHPDAGAS---------------FYLSH 123 (338)
Q Consensus 61 ~~~~i~~~~kP~Iaav~G~a~GgG~~lala~D--~ria~~~a~f~~pe~~~Gl~p~~g~~---------------~~l~r 123 (338)
++..+..++.||...+.|.|.+.|.-|++++| .|++.++++|.+.+...|......-. ..+.+
T Consensus 76 I~d~l~~~~~~v~t~~~G~AaSaaslI~~aG~~~~r~~~p~s~imiH~p~~~~~G~a~d~~~~a~~l~~~~~~~~~~ya~ 155 (191)
T TIGR00493 76 IYDTMQFIKPDVSTICIGQAASMGAFLLSAGAKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQANEILRLKGLLNDILAN 155 (191)
T ss_pred HHHHHHhcCCCEEEEEEEeeccHHHHHHhcCCCCcEEecCCceEEEecCcccccCCcchhHHHHHHHHHHHHHHHHHHHH
Confidence 34455666777888888999999998888766 69999999999988764432111111 11222
Q ss_pred ccch--H-HHHHhhhCCCCCHHHHHHcCccceecc
Q 019601 124 LPGY--L-GEYLALTGEKLNGVEMIACGLATHYTL 155 (338)
Q Consensus 124 ~~g~--~-a~~l~ltG~~~~a~eA~~~GLv~~vv~ 155 (338)
.-|. . ..+++-.+..++|+||+++||+|+|+.
T Consensus 156 ~tg~~~~~i~~~~~~~~~lta~EA~~~GliD~ii~ 190 (191)
T TIGR00493 156 HTGQSLEQIEKDTERDFFMSAEEAKEYGLIDSVLT 190 (191)
T ss_pred HHCcCHHHHHHHhhCCccCcHHHHHHcCCccEEec
Confidence 2333 3 466667788999999999999999975
No 116
>CHL00028 clpP ATP-dependent Clp protease proteolytic subunit
Probab=98.11 E-value=2.8e-05 Score=69.20 Aligned_cols=98 Identities=11% Similarity=-0.015 Sum_probs=72.5
Q ss_pred HHHHHHhhCCCCEEEEEccccccchhhhhhcCC--eEEEeCceeEecCCCCcCcCCCcch----------------HHHH
Q 019601 60 QFVYLQGTFVKPHVAILDGITMGCGAGISLQGM--YRVVTDKTVFSNPETQMGFHPDAGA----------------SFYL 121 (338)
Q Consensus 60 ~~~~~i~~~~kP~Iaav~G~a~GgG~~lala~D--~ria~~~a~f~~pe~~~Gl~p~~g~----------------~~~l 121 (338)
.++..+...+.||.+.+.|.|.+.|.-|++++| -|++.++++|.+.....|..-+-.. ...+
T Consensus 79 aIyd~m~~~~~~V~Tv~~G~AaS~aslIl~aG~kg~R~~~p~s~imiHqp~~~~~~G~a~di~~~a~~l~~~~~~~~~~y 158 (200)
T CHL00028 79 AIYDTMQFVKPDVHTICLGLAASMASFILAGGEITKRLAFPHARVMIHQPASSFYEGQASEFVLEAEELLKLRETITRVY 158 (200)
T ss_pred HHHHHHHhcCCCEEEEEEEehHHHHHHHHhCCCCCCEEecCCCeEEEecCccCcCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 345567788999999999999999999999999 6999999999999877663111100 0111
Q ss_pred hhccchH---HHHHhhhCCCCCHHHHHHcCccceeccCC
Q 019601 122 SHLPGYL---GEYLALTGEKLNGVEMIACGLATHYTLNG 157 (338)
Q Consensus 122 ~r~~g~~---a~~l~ltG~~~~a~eA~~~GLv~~vv~~~ 157 (338)
...-|.. ..+++-....++|+||+++||||+|+.+.
T Consensus 159 a~~Tg~~~e~i~~~~~r~~~lta~EA~eyGliD~I~~~~ 197 (200)
T CHL00028 159 AQRTGKPLWVISEDMERDVFMSATEAKAYGIVDLVAVNN 197 (200)
T ss_pred HHHHCcCHHHHHHHhhcCccCCHHHHHHcCCCcEEeecC
Confidence 1122322 45666677889999999999999999764
No 117
>PRK05724 acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated
Probab=98.04 E-value=0.00024 Score=67.25 Aligned_cols=93 Identities=13% Similarity=0.049 Sum_probs=68.0
Q ss_pred HHHHHHHHHHHhhCCCCEEEEEccccccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchHHHHHhh
Q 019601 55 FETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYLGEYLAL 134 (338)
Q Consensus 55 ~~~~~~~~~~i~~~~kP~Iaav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~a~~l~l 134 (338)
.+.+.+++..+.....|+|+.|-|.|.|||......||+++|.+++.++ +.++-|++..+.+-... +.+..-
T Consensus 175 ~~aia~~l~~~a~~~VP~IsVIiGeg~sGGAla~~~aD~v~m~~~A~~s-------visPEg~a~Il~~~~~~-a~~aae 246 (319)
T PRK05724 175 SEAIARNLREMARLKVPIICTVIGEGGSGGALAIGVGDRVLMLEYSTYS-------VISPEGCASILWKDASK-APEAAE 246 (319)
T ss_pred HHHHHHHHHHHhCCCCCEEEEEeCCccHHHHHHHhccCeeeeecCceEe-------ecCHHHHHHHHhcCchh-HHHHHH
Confidence 3455667778889999999999999988887666679999999988765 33444445545543222 222222
Q ss_pred hCCCCCHHHHHHcCccceeccC
Q 019601 135 TGEKLNGVEMIACGLATHYTLN 156 (338)
Q Consensus 135 tG~~~~a~eA~~~GLv~~vv~~ 156 (338)
.-.++++++.+.|+||.|++.
T Consensus 247 -~~~ita~~l~~~g~iD~II~E 267 (319)
T PRK05724 247 -AMKITAQDLKELGIIDEIIPE 267 (319)
T ss_pred -HcCCCHHHHHHCCCceEeccC
Confidence 456899999999999999985
No 118
>COG0616 SppA Periplasmic serine proteases (ClpP class) [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=98.02 E-value=5.3e-05 Score=72.26 Aligned_cols=133 Identities=18% Similarity=0.189 Sum_probs=92.7
Q ss_pred HHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccccc
Q 019601 3 GRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMG 82 (338)
Q Consensus 3 ~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a~G 82 (338)
+.+.+.|+.+..|+++++|||.=+ |-|+....- ..+++.+.++..-. ||++.|++.|.-
T Consensus 83 ~~~~~~l~~~~~~~~vk~vvL~in----SPGG~v~as----------------~~i~~~l~~l~~~~-PV~v~v~~~AAS 141 (317)
T COG0616 83 DDIEEILRAARADPSVKAVVLRIN----SPGGSVVAS----------------ELIARALKRLRAKK-PVVVSVGGYAAS 141 (317)
T ss_pred HHHHHHHHHHhcCCCCceEEEEEE----CcCCchhHH----------------HHHHHHHHHHhhcC-CEEEEECCeecc
Confidence 456778888888888888888766 556655532 22334444555545 999999999999
Q ss_pred chhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhc--------------------------------------
Q 019601 83 CGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHL-------------------------------------- 124 (338)
Q Consensus 83 gG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~-------------------------------------- 124 (338)
||..++++||.+||++++..|--.+..+. |.. ...+.+.
T Consensus 142 GGY~IA~aAd~I~a~p~si~GSIGVi~~~-~~~--~~l~~k~Gv~~~~~~ag~~k~~~~~~~~~t~e~~~~~q~~~~e~y 218 (317)
T COG0616 142 GGYYIALAADKIVADPSSITGSIGVISGA-PNF--EELLEKLGVEKEVITAGEYKDILSPFRPLTEEEREILQKEIDETY 218 (317)
T ss_pred hhhhhhccCCEEEecCCceeeeceeEEec-CCH--HHHHHhcCCceeeeeccccccccCcccCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999887754444331 111 1112221
Q ss_pred ----------cc-hH-HHHHhhhCCCCCHHHHHHcCccceeccCCCh
Q 019601 125 ----------PG-YL-GEYLALTGEKLNGVEMIACGLATHYTLNGRL 159 (338)
Q Consensus 125 ----------~g-~~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l 159 (338)
-+ .. ...-+.+|+.+++++|.+.||||++-..++.
T Consensus 219 ~~F~~~V~~~R~~~~~~~~~~a~g~v~~g~~A~~~gLVDelg~~~~a 265 (317)
T COG0616 219 DEFVDKVAEGRGLSDEAVDKLATGRVWTGQQALELGLVDELGGLDDA 265 (317)
T ss_pred HHHHHHHHhcCCCChhHHHHHhccceecHHHhhhcCCchhcCCHHHH
Confidence 01 11 3446778999999999999999999875443
No 119
>PLN03230 acetyl-coenzyme A carboxylase carboxyl transferase; Provisional
Probab=98.02 E-value=0.00011 Score=71.48 Aligned_cols=92 Identities=14% Similarity=0.074 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHhhCCCCEEEEEccccccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHh
Q 019601 55 FETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLA 133 (338)
Q Consensus 55 ~~~~~~~~~~i~~~~kP~Iaav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~ 133 (338)
...+...+..+.....|+|+.|-|.+.|||......||+++|.+++.++.- .|.++++.++....-.. +.+.
T Consensus 245 a~aIAr~l~ams~l~VPiISVViGeGgSGGAlalg~aD~VlMle~A~ysVi------sPEgaAsILwkd~~~A~eAAea- 317 (431)
T PLN03230 245 GEAIAFNLREMFGLRVPIIATVIGEGGSGGALAIGCGNRMLMMENAVYYVA------SPEACAAILWKSAAAAPKAAEA- 317 (431)
T ss_pred HHHHHHHHHHHhcCCCCEEEEEeCCCCcHHHHHhhcCCEEEEecCCEEEec------CHHHHHHHHhccccchHHHHHH-
Confidence 455667777888999999999999996666555557899999999876532 24444433333222222 4443
Q ss_pred hhCCCCCHHHHHHcCccceeccC
Q 019601 134 LTGEKLNGVEMIACGLATHYTLN 156 (338)
Q Consensus 134 ltG~~~~a~eA~~~GLv~~vv~~ 156 (338)
-.++|+++.+.|+||.|++.
T Consensus 318 ---lkitA~dL~~~GiID~II~E 337 (431)
T PLN03230 318 ---LRITAAELVKLGVVDEIVPE 337 (431)
T ss_pred ---cCCCHHHHHhCCCCeEeccC
Confidence 38999999999999999985
No 120
>PLN03229 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional
Probab=97.97 E-value=9.1e-05 Score=76.22 Aligned_cols=92 Identities=14% Similarity=-0.007 Sum_probs=67.9
Q ss_pred HHHHHHHHHHhhCCCCEEEEEccccccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchHHHHHhhh
Q 019601 56 ETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYLGEYLALT 135 (338)
Q Consensus 56 ~~~~~~~~~i~~~~kP~Iaav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~a~~l~lt 135 (338)
..+...+..+.....|+|+.|-|.|.|||+.....||+++|.+++.++. .++-|++..+.+-.... .-+-.
T Consensus 267 ~aIArnl~amasl~VP~ISVViGeggSGGAlA~g~aD~VlMle~A~~sV-------isPEgaAsILwkd~~~A--~eAAe 337 (762)
T PLN03229 267 EAIAHNLRTMFGLKVPIVSIVIGEGGSGGALAIGCANKLLMLENAVFYV-------ASPEACAAILWKSAKAA--PKAAE 337 (762)
T ss_pred HHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhcCCEEEEecCCeEEe-------cCHHHHHHHHhcCcccH--HHHHH
Confidence 4456677778899999999999999888888888899999999887553 33334444444433222 11223
Q ss_pred CCCCCHHHHHHcCccceeccC
Q 019601 136 GEKLNGVEMIACGLATHYTLN 156 (338)
Q Consensus 136 G~~~~a~eA~~~GLv~~vv~~ 156 (338)
.-.++|++.+++|+||.|+|.
T Consensus 338 ~lkiTa~dL~~lGiiD~IIpE 358 (762)
T PLN03229 338 KLRITAQELCRLQIADGIIPE 358 (762)
T ss_pred HcCCCHHHHHhCCCCeeeccC
Confidence 358999999999999999985
No 121
>TIGR00513 accA acetyl-CoA carboxylase, carboxyl transferase, alpha subunit. The enzyme acetyl-CoA carboxylase contains a biotin carboxyl carrier protein or domain, a biotin carboxylase, and a carboxyl transferase. This model represents the alpha chain of the carboxyl transferase for cases in which the architecture of the protein is as in E. coli, in which the carboxyltransferase portion consists of two non-identical subnits, alpha and beta.
Probab=97.93 E-value=0.00016 Score=68.39 Aligned_cols=91 Identities=13% Similarity=0.030 Sum_probs=66.2
Q ss_pred HHHHHHHHHHhhCCCCEEEEEccccccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccch-H-HHHHh
Q 019601 56 ETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGY-L-GEYLA 133 (338)
Q Consensus 56 ~~~~~~~~~i~~~~kP~Iaav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~-~-a~~l~ 133 (338)
+.+...+..+.....|+|+.|-|.|.|||......||++++.+++.++ +.++-|++..+.+-... . +.+.
T Consensus 176 ~aia~~l~a~s~~~VP~IsVViGeggsGGAla~~~aD~v~m~~~a~~s-------VisPEg~a~Il~kd~~~a~~aae~- 247 (316)
T TIGR00513 176 EAIARNLREMARLGVPVICTVIGEGGSGGALAIGVGDKVNMLEYSTYS-------VISPEGCAAILWKDASKAPKAAEA- 247 (316)
T ss_pred HHHHHHHHHHHcCCCCEEEEEecccccHHHhhhccCCEEEEecCceEE-------ecCHHHHHHHhccchhhHHHHHHH-
Confidence 445667777789999999999999987777666679999999998765 33333444445443221 1 3332
Q ss_pred hhCCCCCHHHHHHcCccceeccCC
Q 019601 134 LTGEKLNGVEMIACGLATHYTLNG 157 (338)
Q Consensus 134 ltG~~~~a~eA~~~GLv~~vv~~~ 157 (338)
..++++++.+.|+||.|+|..
T Consensus 248 ---~~~ta~~l~~~G~iD~II~ep 268 (316)
T TIGR00513 248 ---MKITAPDLKELGLIDSIIPEP 268 (316)
T ss_pred ---ccCCHHHHHHCCCCeEeccCC
Confidence 567899999999999999853
No 122
>PRK14514 ATP-dependent Clp protease proteolytic subunit; Provisional
Probab=97.87 E-value=0.00018 Score=64.96 Aligned_cols=96 Identities=9% Similarity=-0.016 Sum_probs=71.2
Q ss_pred HHHHHhhCCCCEEEEEccccccchhhhhhcCCe--EEEeCceeEecCCCCcCcCCCcchHH---------------HHhh
Q 019601 61 FVYLQGTFVKPHVAILDGITMGCGAGISLQGMY--RVVTDKTVFSNPETQMGFHPDAGASF---------------YLSH 123 (338)
Q Consensus 61 ~~~~i~~~~kP~Iaav~G~a~GgG~~lala~D~--ria~~~a~f~~pe~~~Gl~p~~g~~~---------------~l~r 123 (338)
++..+...+-||.+.+.|.|.+.|..|++++|. |++.++++|.+....-|......-.. .+++
T Consensus 104 Iyd~m~~~~~~V~tv~~G~AAS~AslIl~aG~~gkR~~~pna~iMiHqP~~~~~G~a~di~i~a~el~~~~~~i~~iya~ 183 (221)
T PRK14514 104 IYDTMQFISSDVATICTGMAASMASVLLVAGTKGKRSALPHSRVMIHQPLGGAQGQASDIEITAREIQKLKKELYTIIAD 183 (221)
T ss_pred HHHHHHhcCCCEEEEEEEEehhHHHHHHhcCCCCceeeCCCCEEEeccCCcccCCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 445667788899999999999999999999996 99999999998887655422211010 0111
Q ss_pred ccchH---HHHHhhhCCCCCHHHHHHcCccceeccC
Q 019601 124 LPGYL---GEYLALTGEKLNGVEMIACGLATHYTLN 156 (338)
Q Consensus 124 ~~g~~---a~~l~ltG~~~~a~eA~~~GLv~~vv~~ 156 (338)
.-|.. ..+.+-....++|+||+++||||+|+..
T Consensus 184 ~TG~~~e~I~~~~~rd~wmtA~EA~eyGliD~Vi~~ 219 (221)
T PRK14514 184 HSGTPFDKVWADSDRDYWMTAQEAKEYGMIDEVLIK 219 (221)
T ss_pred HHCcCHHHHHHHhhcCccCCHHHHHHcCCccEEeec
Confidence 22432 4555667788999999999999999864
No 123
>PRK12551 ATP-dependent Clp protease proteolytic subunit; Reviewed
Probab=97.87 E-value=0.00024 Score=63.06 Aligned_cols=99 Identities=13% Similarity=-0.031 Sum_probs=70.7
Q ss_pred HHHHHHhhCCCCEEEEEccccccchhhhhhcCCe--EEEeCceeEecCCCCcCcCCCcchHH---------------HHh
Q 019601 60 QFVYLQGTFVKPHVAILDGITMGCGAGISLQGMY--RVVTDKTVFSNPETQMGFHPDAGASF---------------YLS 122 (338)
Q Consensus 60 ~~~~~i~~~~kP~Iaav~G~a~GgG~~lala~D~--ria~~~a~f~~pe~~~Gl~p~~g~~~---------------~l~ 122 (338)
.++..+..++.||.+.+.|.|.+.|..|++++|- |++.++++|.+....-|..-...-.. .+.
T Consensus 74 aIyd~m~~~~~~V~t~~~G~AaS~AslIl~aG~~~~R~~~p~a~iMIHqP~~~~~G~a~di~~~a~~l~~~~~~~~~~ya 153 (196)
T PRK12551 74 GIFDTMQHVKPDVHTVCVGLAASMGAFLLCAGAKGKRSSLQHSRIMIHQPLGGARGQASDIRIQADEILFLKERLNTELS 153 (196)
T ss_pred HHHHHHHhcCCCEEEEEEEEehhHHHHHHhCCCCCceecCCCCEEEEecCCcccCCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 3455566788899999999999999999999985 89999999998887644321111010 111
Q ss_pred hccchH---HHHHhhhCCCCCHHHHHHcCccceeccCCC
Q 019601 123 HLPGYL---GEYLALTGEKLNGVEMIACGLATHYTLNGR 158 (338)
Q Consensus 123 r~~g~~---a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~ 158 (338)
..-|.. ..+.+-....++|+||++.||+|+|++...
T Consensus 154 ~~tG~~~~~i~~~~~rd~~msa~EA~eyGliD~I~~~~~ 192 (196)
T PRK12551 154 ERTGQPLERIQEDTDRDFFMSPSEAVEYGLIDLVIDKRP 192 (196)
T ss_pred HHHCcCHHHHHHHhhcCcCCCHHHHHHcCCCcEEeccCC
Confidence 122322 355555667899999999999999998643
No 124
>PRK14513 ATP-dependent Clp protease proteolytic subunit; Provisional
Probab=97.85 E-value=0.00021 Score=63.67 Aligned_cols=97 Identities=15% Similarity=0.058 Sum_probs=72.9
Q ss_pred HHHHHHhhCCCCEEEEEccccccchhhhhhcCCe--EEEeCceeEecCCCCcCcCCCcchHHH-----------------
Q 019601 60 QFVYLQGTFVKPHVAILDGITMGCGAGISLQGMY--RVVTDKTVFSNPETQMGFHPDAGASFY----------------- 120 (338)
Q Consensus 60 ~~~~~i~~~~kP~Iaav~G~a~GgG~~lala~D~--ria~~~a~f~~pe~~~Gl~p~~g~~~~----------------- 120 (338)
.++..+..++-||.+.+.|.|.+.|..|++++|- |++.+++++.+.....|+. +....+
T Consensus 76 aIyd~m~~~~~~V~Ti~~G~AaS~As~il~aG~kgkR~~~pna~iMIHqp~~~~~--G~a~di~~~a~el~~~~~~l~~i 153 (201)
T PRK14513 76 AIYDTMRYIKAPVSTICVGIAMSMGSVLLMAGDKGKRMALPNSRIMIHQGSAGFR--GNTPDLEVQAKEVLFLRDTLVDI 153 (201)
T ss_pred HHHHHHHhcCCCEEEEEEeeehhhHHHHHhcCCCCcEEecCCeEEEEecCCCCCC--CCHHHHHHHHHHHHHHHHHHHHH
Confidence 3455667888899999999999999999999995 9999999999988876642 111111
Q ss_pred HhhccchH---HHHHhhhCCCCCHHHHHHcCccceeccCCC
Q 019601 121 LSHLPGYL---GEYLALTGEKLNGVEMIACGLATHYTLNGR 158 (338)
Q Consensus 121 l~r~~g~~---a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~ 158 (338)
+.+.-|.. -..++-....++|+||+++||||+|+++..
T Consensus 154 ya~~Tg~~~~~I~~~~~rd~~msa~EA~eyGliD~I~~~~~ 194 (201)
T PRK14513 154 YHRHTDLPHEKLLRDMERDYFMSPEEAKAYGLIDSVIEPTR 194 (201)
T ss_pred HHHHHCcCHHHHHHHhccCcccCHHHHHHcCCCcEEeccCC
Confidence 11222322 355556668899999999999999998754
No 125
>TIGR03133 malonate_beta malonate decarboxylase, beta subunit. Members of this protein family are the beta subunit of malonate decarboxylase. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase.
Probab=97.81 E-value=0.00028 Score=65.62 Aligned_cols=78 Identities=14% Similarity=0.118 Sum_probs=61.1
Q ss_pred CCEEEEEccc--cccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccch--H-HHHHhhhCCCCCHHHH
Q 019601 70 KPHVAILDGI--TMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGY--L-GEYLALTGEKLNGVEM 144 (338)
Q Consensus 70 kP~Iaav~G~--a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~--~-a~~l~ltG~~~~a~eA 144 (338)
.|+|+.+.|+ |+||+..++..||++||++++++++. +...+....|. . ..+-.|..+.+.+...
T Consensus 137 vP~Isvv~Gp~gc~GG~a~~a~l~D~vim~~~a~i~~a-----------GP~VIe~~~G~e~~~~~d~~l~~~~lGG~~~ 205 (274)
T TIGR03133 137 VPVIGVIGGRVGCFGGMGIAAGLCSYLIMTEEGRLGLS-----------GPEVIEQEAGVEEFDSRDRALVWRTTGGKHR 205 (274)
T ss_pred CCEEEEEeCCCCcchHHHHHHhcCCEEEEeCCcEEecc-----------CHHHHHHhcCCCccCHHHhcccccccchHhH
Confidence 9999999999 89999999999999999998877652 23334444452 2 5556666677777888
Q ss_pred HHcCccceeccCCC
Q 019601 145 IACGLATHYTLNGR 158 (338)
Q Consensus 145 ~~~GLv~~vv~~~~ 158 (338)
+..|++|.+++++.
T Consensus 206 ~~sG~~D~~v~dd~ 219 (274)
T TIGR03133 206 FLSGDADVLVEDDV 219 (274)
T ss_pred hhcccceEEeCCHH
Confidence 89999999998754
No 126
>PRK11778 putative inner membrane peptidase; Provisional
Probab=97.69 E-value=0.00026 Score=67.58 Aligned_cols=97 Identities=11% Similarity=0.011 Sum_probs=67.5
Q ss_pred HHHHhhCCCCEEEEEccccccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchH-----------------------
Q 019601 62 VYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGAS----------------------- 118 (338)
Q Consensus 62 ~~~i~~~~kP~Iaav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~----------------------- 118 (338)
+.++....||+|+.+++.|.-||..++++||-++|.+.+.++...+-.. .|.....
T Consensus 147 l~~lr~~~kpVva~v~~~AASggY~iAsaAD~I~A~P~a~vGSIGVi~~-~~~~~~lLeKlGI~~evi~aG~yK~a~~pf 225 (330)
T PRK11778 147 LQRLRDAGIPLTVAVDKVAASGGYMMACVADKIIAAPFAIVGSIGVVAQ-IPNFHRLLKKHDIDVELHTAGEYKRTLTLF 225 (330)
T ss_pred HHHHHhcCCCEEEEECCchhhHHHHHHHhCCEEEECCCCeEEeeeeeee-ccCHHHHHHHCCCceEEEEecCccCCCCCC
Confidence 3445677899999999999999999999999999999887765443221 1111100
Q ss_pred --------HHHhhcc-------------ch--HHHHHhhhCCCCCHHHHHHcCccceeccCCCh
Q 019601 119 --------FYLSHLP-------------GY--LGEYLALTGEKLNGVEMIACGLATHYTLNGRL 159 (338)
Q Consensus 119 --------~~l~r~~-------------g~--~a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l 159 (338)
..+...+ ++ .-.+-+.+|+.+++++|++.||||++...+++
T Consensus 226 ~~~see~Re~~q~~Ld~~y~~F~~~Va~~R~~l~~~~va~G~v~~g~~Al~~GLVD~Ig~~dd~ 289 (330)
T PRK11778 226 GENTEEGREKFREELEETHQLFKDFVQRYRPQLDIDKVATGEHWYGQQALELGLVDEIQTSDDY 289 (330)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHhCCCcCHHHHHHCCCCCcCCCHHHH
Confidence 0011111 11 12344568999999999999999999876665
No 127
>PRK07189 malonate decarboxylase subunit beta; Reviewed
Probab=97.57 E-value=0.00053 Score=64.53 Aligned_cols=78 Identities=15% Similarity=0.161 Sum_probs=55.6
Q ss_pred CCEEEEEccc--cccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccch--H-HHHHhhhCCCCCHHHH
Q 019601 70 KPHVAILDGI--TMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGY--L-GEYLALTGEKLNGVEM 144 (338)
Q Consensus 70 kP~Iaav~G~--a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~--~-a~~l~ltG~~~~a~eA 144 (338)
.|+|+.+.|+ |+||+..++.+||++||++++.+++. +...+....|. - ..+..+..+.+.+...
T Consensus 146 VP~I~vv~G~~gc~GG~a~~a~l~D~iIm~~~a~igla-----------GP~VIe~~~G~e~~d~~d~~~vw~~lGG~h~ 214 (301)
T PRK07189 146 VPVIGLIGGRVGCFGGMGIAAALCSYLIVSEEGRLGLS-----------GPEVIEQEAGVEEFDSRDRALVWRTTGGKHR 214 (301)
T ss_pred CCEEEEEcCCCCCcHHHHHHHhcCCEEEEECCcEEecc-----------CHHHHHHhcCCcccCHHHhcccccccCccee
Confidence 9999999999 99999999999999999998877652 23333333341 2 4444443333444455
Q ss_pred HHcCccceeccCCC
Q 019601 145 IACGLATHYTLNGR 158 (338)
Q Consensus 145 ~~~GLv~~vv~~~~ 158 (338)
+..|.+|.+++++.
T Consensus 215 ~~sG~~D~~v~dd~ 228 (301)
T PRK07189 215 YLSGLADALVDDDV 228 (301)
T ss_pred eecccceEEeCCHH
Confidence 67899999998764
No 128
>PF01972 SDH_sah: Serine dehydrogenase proteinase; InterPro: IPR002825 This family of archaebacterial proteins, formerly known as DUF114, has been found to be a serine dehydrogenase proteinase distantly related to ClpP proteinases that belong to the serine proteinase superfamily. The family belong to MEROPS peptidase family S49; they are mostly unassigned peptidases but include the archaean signal peptide peptidase 1 []. The family has a catalytic triad of Ser, Asp, His residues, which shows an altered residue ordering compared with the ClpP proteinases but similar to that of the carboxypeptidase clan []. ; GO: 0016021 integral to membrane
Probab=97.48 E-value=0.0019 Score=59.62 Aligned_cols=58 Identities=21% Similarity=0.176 Sum_probs=51.9
Q ss_pred HHHHHHhhCCCCEEEEEccccccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcch
Q 019601 60 QFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGA 117 (338)
Q Consensus 60 ~~~~~i~~~~kP~Iaav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~ 117 (338)
++...+..++.++++.|++.|+-||.-+|++||-+++++.+.+|--+.++|-.|..+.
T Consensus 109 ~I~~~l~~~~~~v~v~VP~~A~SAGTlIALaADeIvM~p~a~LGpiDPqi~~~pA~si 166 (285)
T PF01972_consen 109 QIARALREHPAKVTVIVPHYAMSAGTLIALAADEIVMGPGAVLGPIDPQIGQYPAASI 166 (285)
T ss_pred HHHHHHHhCCCCEEEEECcccccHHHHHHHhCCeEEECCCCccCCCCccccCCChHHH
Confidence 3455677899999999999999999999999999999999999999999998886443
No 129
>TIGR00705 SppA_67K signal peptide peptidase SppA, 67K type. E. coli SohB, which is most closely homologous to the C-terminal duplication of SppA, is predicted to perform a similar function of small peptide degradation, but in the periplasm. Many prokaryotes have a single SppA/SohB homolog that may perform the function of either or both.
Probab=97.43 E-value=0.0011 Score=68.40 Aligned_cols=84 Identities=10% Similarity=-0.105 Sum_probs=64.3
Q ss_pred HHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEccccc
Q 019601 2 VGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITM 81 (338)
Q Consensus 2 ~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a~ 81 (338)
+.++.++++++..|+.|++|||.-.+ +.|+++..+ +.+.+.+..+....|||||..++.+
T Consensus 78 l~~i~~~i~~A~~D~~IkgIvL~i~~---~~g~~~~~~----------------~ei~~ai~~fk~sgKpVvA~~~~~~- 137 (584)
T TIGR00705 78 LFDIVNAIRQAADDRRIEGLVFDLSN---FSGWDSPHL----------------VEIGSALSEFKDSGKPVYAYGTNYS- 137 (584)
T ss_pred HHHHHHHHHHHhcCCCceEEEEEccC---CCCCCHHHH----------------HHHHHHHHHHHhcCCeEEEEEcccc-
Confidence 56899999999999999999999873 235554433 1233444455677999999988775
Q ss_pred cchhhhhhcCCeEEEeCceeEecC
Q 019601 82 GCGAGISLQGMYRVVTDKTVFSNP 105 (338)
Q Consensus 82 GgG~~lala~D~ria~~~a~f~~p 105 (338)
-+|..|+.+||-+++.+.+.+++.
T Consensus 138 s~~YylAs~AD~I~~~p~G~v~~~ 161 (584)
T TIGR00705 138 QGQYYLASFADEIILNPMGSVDLH 161 (584)
T ss_pred chhhhhhhhCCEEEECCCceEEee
Confidence 678999999999999998777553
No 130
>COG0740 ClpP Protease subunit of ATP-dependent Clp proteases [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=97.16 E-value=0.0053 Score=54.33 Aligned_cols=99 Identities=11% Similarity=-0.010 Sum_probs=69.7
Q ss_pred HHHHHHhhCCCCEEEEEccccccchhhhhhcCCeE--EEeCceeEecCCCCcCcCCCcch-HHH---------------H
Q 019601 60 QFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYR--VVTDKTVFSNPETQMGFHPDAGA-SFY---------------L 121 (338)
Q Consensus 60 ~~~~~i~~~~kP~Iaav~G~a~GgG~~lala~D~r--ia~~~a~f~~pe~~~Gl~p~~g~-~~~---------------l 121 (338)
.++..+...+.||...+-|.|...|..|+++++.. ++.+++++.+....-|+. +... ... +
T Consensus 76 AIydtm~~ik~~V~ti~~G~AaSmgs~l~~aG~~g~r~~lPnsrimIHqP~gg~~-G~a~Di~i~A~ei~~~~~~l~~i~ 154 (200)
T COG0740 76 AIYDTMQFIKPPVSTICMGQAASMGSVLLMAGDKGKRFALPNARIMIHQPSGGAQ-GQASDIEIHAREILKIKERLNRIY 154 (200)
T ss_pred HHHHHHHhcCCCeEEEEecHHHhHHHHHHhcCCCCCceeCCCceEEEecCCccCc-cCHHHHHHHHHHHHHHHHHHHHHH
Confidence 45556778999999999999999999999999986 999999888887773332 1111 000 0
Q ss_pred hhccchH---HHHHhhhCCCCCHHHHHHcCccceeccCCCh
Q 019601 122 SHLPGYL---GEYLALTGEKLNGVEMIACGLATHYTLNGRL 159 (338)
Q Consensus 122 ~r~~g~~---a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l 159 (338)
+..-|.. -....-....++|+||+++||+|+|....+.
T Consensus 155 a~~TGq~~e~i~~d~drd~~msa~eA~~yGLiD~V~~~~~~ 195 (200)
T COG0740 155 AEHTGQTLEKIEKDTDRDTWMSAEEAKEYGLIDKVIESREA 195 (200)
T ss_pred HHHcCCCHHHHHHhhcccccCCHHHHHHcCCcceecccccc
Confidence 1111322 1233334578999999999999999987543
No 131
>TIGR00515 accD acetyl-CoA carboxylase, carboxyl transferase, beta subunit. The enzyme acetyl-CoA carboxylase contains a biotin carboxyl carrier protein or domain, a biotin carboxylase, and a carboxyl transferase. This model represents the beta chain of the carboxyl transferase for cases in which the architecture of the protein is as in E. coli, in which the carboxyltransferase portion consists of two non-identical subnits, alpha and beta.
Probab=97.13 E-value=0.0077 Score=56.50 Aligned_cols=130 Identities=11% Similarity=0.088 Sum_probs=77.6
Q ss_pred HHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccccc
Q 019601 3 GRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMG 82 (338)
Q Consensus 3 ~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a~G 82 (338)
+.+.++++.+... .+-+|.|+..|++ -+. ++. ..... +......+.++.....|.|+.+.|+|.|
T Consensus 142 eKi~r~~e~A~~~-~lPlV~l~dSgGa-----Rmq-------Eg~-~sL~~-~ak~~~~~~~~~~~~vP~IsVv~gpt~G 206 (285)
T TIGR00515 142 EKFVRAIEKALED-NCPLIIFSASGGA-----RMQ-------EAL-LSLMQ-MAKTSAALAKMSERGLPYISVLTDPTTG 206 (285)
T ss_pred HHHHHHHHHHHHc-CCCEEEEEcCCCc-----ccc-------cch-hHHHh-HHHHHHHHHHHHcCCCCEEEEEeCCcch
Confidence 3456666666543 4667777665543 221 111 01111 1222223344556789999999999999
Q ss_pred chhh-hhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchHHHHHhhhCCCCCHHHHHHcCccceeccCCChhH
Q 019601 83 CGAG-ISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYLGEYLALTGEKLNGVEMIACGLATHYTLNGRLPL 161 (338)
Q Consensus 83 gG~~-lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l~~ 161 (338)
|+.. .++.+|++||.++|.+++...+ .+...+|.. +.-+.-+|+-+.+.|+||.||++.++..
T Consensus 207 G~aas~a~~~D~iia~p~A~ig~aGpr-----------Vie~ti~e~-----lpe~~q~ae~~~~~G~vD~iv~~~~~r~ 270 (285)
T TIGR00515 207 GVSASFAMLGDLNIAEPKALIGFAGPR-----------VIEQTVREK-----LPEGFQTSEFLLEHGAIDMIVHRPEMKK 270 (285)
T ss_pred HHHHHHHhCCCEEEEECCeEEEcCCHH-----------HHHHHhcCc-----cchhcCCHHHHHhCCCCcEEECcHHHHH
Confidence 9655 5579999999999888763332 122222211 1111225566778999999999988765
Q ss_pred HH
Q 019601 162 VE 163 (338)
Q Consensus 162 ~~ 163 (338)
..
T Consensus 271 ~l 272 (285)
T TIGR00515 271 TL 272 (285)
T ss_pred HH
Confidence 33
No 132
>PF01343 Peptidase_S49: Peptidase family S49 peptidase classification.; InterPro: IPR002142 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S49 (protease IV family, clan S-). The predicted active site serine for members of this family occurs in a transmembrane domain. The domain defines sequences in viruses, archaea, bacteria and plants. These sequences are variously annotated in the different taxonomic groups, examples are: Viruses: capsid protein Archaea: proteinase IV homolog Bacteria: proteinase IV, sohB, SppA, pfaP, putative protease Plants: SppA, protease IV This group also contains proteins classified as non-peptidase homologues that either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity of peptidases. Related proteins, non-peptidase homologs and unclassified S49 members are also to be found in IPR002810 from INTERPRO.; GO: 0008233 peptidase activity, 0006508 proteolysis; PDB: 3RST_B 3BEZ_D 3BF0_A.
Probab=97.10 E-value=0.00056 Score=58.35 Aligned_cols=96 Identities=16% Similarity=0.055 Sum_probs=60.9
Q ss_pred HhhCCCCEEEEEccccccchhhhhhcCCeEEEeCceeEecCCCC------------cCc---------CCCcc-----hH
Q 019601 65 QGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQ------------MGF---------HPDAG-----AS 118 (338)
Q Consensus 65 i~~~~kP~Iaav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~------------~Gl---------~p~~g-----~~ 118 (338)
..+..|||||.++|.|..+|.-|+.+||-+++++.+.++...+. +|+ .-..+ .+
T Consensus 2 ~~~~~KpV~a~~~~~~~S~~Y~lAs~ad~I~~~p~s~vgsiGv~~~~~~~~~~l~k~GV~~~~~~~g~~K~~~~~~~~~s 81 (154)
T PF01343_consen 2 FKASGKPVVAYAEGYAASGAYYLASAADEIYANPSSSVGSIGVSAERLFFKGLLEKLGVKVEVVRSGEYKSAGFPRDPMS 81 (154)
T ss_dssp HHHTT--EEEEEEEEEETHHHHHHTTSSEEEE-TT-EEE---EEEEEEE-HHHHHHTT-EEEEEESSTTCCCCCTTSS--
T ss_pred ccccCCeEEEEECCcchhHHHHHHHcCCEEEecCCCEEEEeChhhccccHHHHHHHCCCeEEEEecCccccccCcCCCCC
Confidence 35789999999999999999999999999999998877765443 222 01110 00
Q ss_pred ----HHHhhc---------------cc--hHHHHHhhhCCCCCHHHHHHcCccceeccCCChh
Q 019601 119 ----FYLSHL---------------PG--YLGEYLALTGEKLNGVEMIACGLATHYTLNGRLP 160 (338)
Q Consensus 119 ----~~l~r~---------------~g--~~a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l~ 160 (338)
..+.+. .| ....+-+..|..+++++|++.||||.+-..+++.
T Consensus 82 ~~~r~~~~~~l~~~~~~f~~~Va~~R~~~~~~v~~~~~~~~~~~~~A~~~GLiD~i~~~~~~~ 144 (154)
T PF01343_consen 82 EEERENLQELLDELYDQFVNDVAEGRGLSPDDVEEIADGGVFTAQQALELGLIDEIGTFDEAI 144 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTS-HHHHHCHHCCHEEEHHHHHHTTSSSEETSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHhhccccHHHHHHcCchhhcCCHHHHH
Confidence 001111 11 1123346789999999999999999998766554
No 133
>PRK05654 acetyl-CoA carboxylase subunit beta; Validated
Probab=97.04 E-value=0.0073 Score=56.89 Aligned_cols=129 Identities=12% Similarity=0.113 Sum_probs=76.6
Q ss_pred HHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccccc
Q 019601 3 GRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMG 82 (338)
Q Consensus 3 ~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a~G 82 (338)
+.+.++++.+... .+-+|.|.-.| |+.+.+ +.. .... +......+.++.....|.|+.+.|+|.|
T Consensus 143 eKi~r~~e~A~~~-~lPlV~l~dsg-----GarmqE-------gi~-sL~~-~ak~~~a~~~~~~a~vP~IsVv~gpt~G 207 (292)
T PRK05654 143 EKIVRAVERAIEE-KCPLVIFSASG-----GARMQE-------GLL-SLMQ-MAKTSAALKRLSEAGLPYISVLTDPTTG 207 (292)
T ss_pred HHHHHHHHHHHHc-CCCEEEEEcCC-----Ccchhh-------hhh-HHHh-HHHHHHHHHHHHcCCCCEEEEEeCCCch
Confidence 3456666666554 46777777554 332221 100 0011 1222233344556789999999999999
Q ss_pred chhh-hhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchHHHHHhhhCCCCCHHHHHHcCccceeccCCChhH
Q 019601 83 CGAG-ISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYLGEYLALTGEKLNGVEMIACGLATHYTLNGRLPL 161 (338)
Q Consensus 83 gG~~-lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l~~ 161 (338)
|+.. .++.+|++||.+++.+++...+ .+...++. ++ .-+.-+++-+.+.|+||.||++.++..
T Consensus 208 G~aas~a~~~D~iia~p~A~ig~aGpr-----------vie~~~~e---~l--pe~~~~ae~~~~~G~vD~Vv~~~e~r~ 271 (292)
T PRK05654 208 GVSASFAMLGDIIIAEPKALIGFAGPR-----------VIEQTVRE---KL--PEGFQRAEFLLEHGAIDMIVHRRELRD 271 (292)
T ss_pred HHHHHHHHcCCEEEEecCcEEEecCHH-----------HHHhhhhh---hh--hhhhcCHHHHHhCCCCcEEECHHHHHH
Confidence 9755 4667999999988877763321 11111111 11 111225666778999999999988764
Q ss_pred H
Q 019601 162 V 162 (338)
Q Consensus 162 ~ 162 (338)
.
T Consensus 272 ~ 272 (292)
T PRK05654 272 T 272 (292)
T ss_pred H
Confidence 3
No 134
>PF01039 Carboxyl_trans: Carboxyl transferase domain; InterPro: IPR000022 Members in this domain include biotin dependent carboxylases [, ]. The carboxyl transferase domain carries out the following reaction; transcarboxylation from biotin to an acceptor molecule. There are two recognised types of carboxyl transferase. One of them uses acyl-CoA and the other uses 2-oxo acid as the acceptor molecule of carbon dioxide. All of the members in this family utilise acyl-CoA as the acceptor molecule.; GO: 0016874 ligase activity; PDB: 2F9Y_B 1XO6_B 1XNV_B 3MFM_C 3IBB_A 1XNW_F 3IAV_B 1XNY_A 3IB9_A 3U9S_F ....
Probab=96.96 E-value=0.01 Score=60.10 Aligned_cols=119 Identities=13% Similarity=0.210 Sum_probs=75.0
Q ss_pred HHHHHHHHHHhcCCCcEEEEEEeCCCCccccC--ChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccc
Q 019601 3 GRLKRLYESWEENPDIGFVLMKGAGRAFCSGG--DVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGIT 80 (338)
Q Consensus 3 ~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~--Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a 80 (338)
..+.++++.+..+ .+.+|.|.- |+|. ++.+-.. .... +..+..-...+.. ..|+|+++.|+|
T Consensus 79 ~Ki~ra~~~A~~~-~~P~v~l~d-----sgGa~~r~~eg~~--------~l~~-~g~i~~~~~~~~~-~iP~I~vv~G~~ 142 (493)
T PF01039_consen 79 EKIARAIELALEN-GLPLVYLVD-----SGGAFLRMQEGVE--------SLMG-MGRIFRAIARLSG-GIPQISVVTGPC 142 (493)
T ss_dssp HHHHHHHHHHHHH-TEEEEEEEE-----ESSBCGGGGGHHH--------HHHH-HHHHHHHHHHHHT-TS-EEEEEESEE
T ss_pred eeeehHHHHHHHc-CCCcEEecc-----ccccccccchhhh--------hhhh-hHHHHHHHHHHhc-CCCeEEEEcccc
Confidence 3456666666655 355555544 3344 4443321 1111 1223333344555 999999999999
Q ss_pred ccchhhhhhcCCeEEEeCc-eeEecCCCCcCcCCCcchHHHHhhccchHHHHHhhhCCCCCHHHH-------HHcCccce
Q 019601 81 MGCGAGISLQGMYRVVTDK-TVFSNPETQMGFHPDAGASFYLSHLPGYLGEYLALTGEKLNGVEM-------IACGLATH 152 (338)
Q Consensus 81 ~GgG~~lala~D~ria~~~-a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~a~~l~ltG~~~~a~eA-------~~~GLv~~ 152 (338)
.|||..++..||++|++++ +.+++. +...+. ..+|+.++.++. ...|.++.
T Consensus 143 ~Gg~A~~~~~~d~~i~~~~~a~i~l~-----------GP~vv~----------~~~Ge~~~~~~lgG~~~h~~~sG~~d~ 201 (493)
T PF01039_consen 143 TGGGAYLAALSDFVIMVKGTARIFLA-----------GPRVVE----------SATGEEVDSEELGGADVHAAKSGVVDY 201 (493)
T ss_dssp EGGGGHHHHHSSEEEEETTTCEEESS-----------THHHHH----------HHHSSCTSHHHHHBHHHHHHTSSSSSE
T ss_pred ccchhhcccccCccccCccceEEEec-----------cccccc----------cccCccccchhhhhhhhhcccCCCceE
Confidence 9999999999999999997 776542 222222 245677777653 47899999
Q ss_pred eccCCC
Q 019601 153 YTLNGR 158 (338)
Q Consensus 153 vv~~~~ 158 (338)
++++++
T Consensus 202 v~~de~ 207 (493)
T PF01039_consen 202 VVDDEE 207 (493)
T ss_dssp EESSHH
T ss_pred EEechH
Confidence 998754
No 135
>TIGR03134 malonate_gamma malonate decarboxylase, gamma subunit. Members of this protein family are the gamma subunit of malonate decarboxylase. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase, while the gamma subunit appears either to mediate subunit interaction or to act as a co-decarboxylase with the beta subunit. The beta and gamma subunits exhibit some local sequence similarity.
Probab=96.93 E-value=0.0044 Score=56.67 Aligned_cols=97 Identities=9% Similarity=-0.082 Sum_probs=62.0
Q ss_pred HHHHHHHHHHHh---hCCCCEEEEEccccccchh-hhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchHHH
Q 019601 55 FETLYQFVYLQG---TFVKPHVAILDGITMGCGA-GISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYLGE 130 (338)
Q Consensus 55 ~~~~~~~~~~i~---~~~kP~Iaav~G~a~GgG~-~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~a~ 130 (338)
.+.+..++..+. ..+.|+|+.|-|.+.|||+ .+.+.+|.++|.+++.+ +..+.-+++..+.+-... ..
T Consensus 90 ~~a~A~l~~a~a~a~~~~vP~IsvI~g~a~ggg~lamg~~ad~v~Alp~A~i-------~vm~~e~aa~I~~~~~~~-~~ 161 (238)
T TIGR03134 90 NQALAHLAKALALARLAGHPVIGLIYGKAISGAFLAHGLQADRIIALPGAMV-------HVMDLESMARVTKRSVEE-LE 161 (238)
T ss_pred HHHHHHHHHHHHHhhcCCCCEEEEEeCCccHHHHHHHccCcCeEEEcCCcEE-------EecCHHHHHHHHccCHhH-HH
Confidence 344444455555 4559999999999998774 44445888877766654 444445555545443322 33
Q ss_pred HHhhh--CCCCCHHHHHHcCccceeccCCCh
Q 019601 131 YLALT--GEKLNGVEMIACGLATHYTLNGRL 159 (338)
Q Consensus 131 ~l~lt--G~~~~a~eA~~~GLv~~vv~~~~l 159 (338)
++.-+ --..+.+.+.++|+|+.|+++.+-
T Consensus 162 e~a~~~~~~a~~~~~~~~~G~vd~vi~~~~~ 192 (238)
T TIGR03134 162 ALAKSSPVFAPGIENFVKLGGVHALLDVADA 192 (238)
T ss_pred HHHHhhhhhccCHHHHHhCCCccEEeCCCCc
Confidence 33222 134677889999999999997553
No 136
>PRK12552 ATP-dependent Clp protease-like protein; Reviewed
Probab=96.92 E-value=0.016 Score=52.34 Aligned_cols=95 Identities=19% Similarity=0.030 Sum_probs=68.5
Q ss_pred HHHHHhhCCCCEEEEEccccccchhhhhhcCCe--EEEeCceeEecCCCCcCcCCCcchHHH-----------------H
Q 019601 61 FVYLQGTFVKPHVAILDGITMGCGAGISLQGMY--RVVTDKTVFSNPETQMGFHPDAGASFY-----------------L 121 (338)
Q Consensus 61 ~~~~i~~~~kP~Iaav~G~a~GgG~~lala~D~--ria~~~a~f~~pe~~~Gl~p~~g~~~~-----------------l 121 (338)
++..+...+-+|...+-|.|.+.|..|++++|- |++.++++|.+.....|.. +-++-+ +
T Consensus 99 IyD~m~~ik~~V~Tv~~G~AaS~AslIl~aG~kg~R~alpns~iMIHqP~~~~~--G~A~di~~~a~el~~~r~~l~~iy 176 (222)
T PRK12552 99 ICDTMRYIKPPVHTICIGQAMGTAAMILSAGTKGQRASLPHATIVLHQPRSGAR--GQATDIQIRAKEVLHNKRTMLEIL 176 (222)
T ss_pred HHHHHHhcCCCeEEEEEeehhhHHHHHHhCCCCCceecCCCcEEEeccCCcccc--cCHHHHHHHHHHHHHHHHHHHHHH
Confidence 445566778889999999999999999999995 9999999999988775542 111111 1
Q ss_pred hhccchH---HHHHhhhCCCCCHHHHHHcCccceeccCC
Q 019601 122 SHLPGYL---GEYLALTGEKLNGVEMIACGLATHYTLNG 157 (338)
Q Consensus 122 ~r~~g~~---a~~l~ltG~~~~a~eA~~~GLv~~vv~~~ 157 (338)
...-|.. -...+-....++|+||+++||||+|+.+.
T Consensus 177 a~~TG~~~e~I~~d~~rd~wmsA~EA~eyGliD~Ii~~~ 215 (222)
T PRK12552 177 SRNTGQTVEKLSKDTDRMFYLTPQEAKEYGLIDRVLESR 215 (222)
T ss_pred HHHHCCCHHHHHHHhcCCCcCCHHHHHHcCCCcEEeccC
Confidence 1111222 23444445789999999999999999753
No 137
>CHL00174 accD acetyl-CoA carboxylase beta subunit; Reviewed
Probab=96.68 E-value=0.017 Score=54.27 Aligned_cols=81 Identities=11% Similarity=-0.006 Sum_probs=54.9
Q ss_pred hCCCCEEEEEccccccchhhh-hhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchHHHHHhhhCCCCCHHHHH
Q 019601 67 TFVKPHVAILDGITMGCGAGI-SLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYLGEYLALTGEKLNGVEMI 145 (338)
Q Consensus 67 ~~~kP~Iaav~G~a~GgG~~l-ala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~a~~l~ltG~~~~a~eA~ 145 (338)
.-..|.|+.+.|+|.||+... ++.||++|+.+++.+++.-.+ ......|.. +.-+-=+|+-..
T Consensus 205 ~~~vP~Isvl~gPt~GG~aas~a~l~Diiiae~~A~IgfAGPr-----------VIe~t~ge~-----lpe~fq~ae~l~ 268 (296)
T CHL00174 205 NKKLFYISILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAGKR-----------VIEQTLNKT-----VPEGSQAAEYLF 268 (296)
T ss_pred cCCCCEEEEEcCCCchHHHHHHHHcccEEEEeCCeEEEeeCHH-----------HHHHhcCCc-----CCcccccHHHHH
Confidence 457999999999999998777 556999999778876654322 122212211 111122466677
Q ss_pred HcCccceeccCCChhHHH
Q 019601 146 ACGLATHYTLNGRLPLVE 163 (338)
Q Consensus 146 ~~GLv~~vv~~~~l~~~~ 163 (338)
+.|+||.+|+..++....
T Consensus 269 ~~G~vD~iV~r~~lr~~l 286 (296)
T CHL00174 269 DKGLFDLIVPRNLLKGVL 286 (296)
T ss_pred hCcCceEEEcHHHHHHHH
Confidence 999999999988876533
No 138
>TIGR01117 mmdA methylmalonyl-CoA decarboxylase alpha subunit. This model describes methymalonyl-CoA decarboxylase aplha subunit in archaea and bacteria. Metylmalonyl-CoA decarboxylase Na+ pump is a representative of a class of Na+ transport decarboxylases that couples the energy derived by decarboxylation of carboxylic acid substrates to drive the extrusion of Na+ ion across the membrane.
Probab=96.24 E-value=0.068 Score=54.38 Aligned_cols=136 Identities=13% Similarity=0.018 Sum_probs=81.2
Q ss_pred HHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEccccccc
Q 019601 4 RLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGC 83 (338)
Q Consensus 4 eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a~Gg 83 (338)
...++++.+.. ..+-+|.|.-.++ |..|.+-. ....++...+++.++.....|.|+.|-|.+.||
T Consensus 338 K~~r~i~~a~~-~~lPlV~lvDs~G-~~~g~~~E-------------~~g~~~~~a~~~~a~~~~~vP~isvi~g~~~Gg 402 (512)
T TIGR01117 338 KIARFIRFCDA-FNIPIVTFVDVPG-FLPGVNQE-------------YGGIIRHGAKVLYAYSEATVPKVTIITRKAYGG 402 (512)
T ss_pred HHHHHHHHHHH-cCCCEEEEEeCcC-ccccHHHH-------------HHHHHHHHHHHHHHHHhCCCCEEEEEcCCCchH
Confidence 34555555544 3456565555443 44443211 122344556777788889999999999999888
Q ss_pred hhhhhh----cCCeEEEeCceeEecCCCCcCcCCCcchHHHHhh-ccc----hH-HHHHh---hhCCCCCHHHHHHcCcc
Q 019601 84 GAGISL----QGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSH-LPG----YL-GEYLA---LTGEKLNGVEMIACGLA 150 (338)
Q Consensus 84 G~~lal----a~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r-~~g----~~-a~~l~---ltG~~~~a~eA~~~GLv 150 (338)
|..-++ .+|+++|.+++.++. .++-+++..+.+ .+. .. +.+-. ..-+..++..+.+.|+|
T Consensus 403 a~~am~~~~~~~d~~~a~p~a~~~v-------~~pe~a~~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~g~v 475 (512)
T TIGR01117 403 AYLAMCSKHLGADQVYAWPTAEIAV-------MGPAGAANIIFRKDIKEAKDPAATRKQKIAEYREEFANPYKAAARGYV 475 (512)
T ss_pred HHHHhccccCCCCEEEEcCCCeEee-------cCHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHhhcCHHHHHhcCCC
Confidence 644433 389988888876654 333333333322 211 11 11111 12235578899999999
Q ss_pred ceeccCCChhH
Q 019601 151 THYTLNGRLPL 161 (338)
Q Consensus 151 ~~vv~~~~l~~ 161 (338)
|.|+++.+...
T Consensus 476 D~VI~P~~tR~ 486 (512)
T TIGR01117 476 DDVIEPKQTRP 486 (512)
T ss_pred CeeEChHHHHH
Confidence 99999988754
No 139
>COG0825 AccA Acetyl-CoA carboxylase alpha subunit [Lipid metabolism]
Probab=96.07 E-value=0.0079 Score=55.74 Aligned_cols=90 Identities=12% Similarity=0.079 Sum_probs=66.3
Q ss_pred HHHHHHHHHhhCCCCEEEEEccccccchhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchH-HHHHhhh
Q 019601 57 TLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALT 135 (338)
Q Consensus 57 ~~~~~~~~i~~~~kP~Iaav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~-a~~l~lt 135 (338)
.+..-...+.+++.||||.|=|---+||+--...+|.+.|-+++.++. +.|.+.++.++..---.. |.+.
T Consensus 176 AIA~nL~em~~LkvPiI~iVIGEGgSGGALAi~vad~V~mle~s~ySV------isPEG~AsILWkD~~ka~eAAe~--- 246 (317)
T COG0825 176 AIARNLREMARLKVPIISIVIGEGGSGGALAIGVADRVLMLENSTYSV------ISPEGCASILWKDASKAKEAAEA--- 246 (317)
T ss_pred HHHHHHHHHhCCCCCEEEEEecCCCchhhHHhhHHHHHHHHHhceeee------cChhhhhhhhhcChhhhHHHHHH---
Confidence 344555677899999999999998777777777889999999998873 456555544333222222 3333
Q ss_pred CCCCCHHHHHHcCccceeccC
Q 019601 136 GEKLNGVEMIACGLATHYTLN 156 (338)
Q Consensus 136 G~~~~a~eA~~~GLv~~vv~~ 156 (338)
-.++|++.+++|+||.|+|.
T Consensus 247 -mkita~dLk~lgiID~II~E 266 (317)
T COG0825 247 -MKITAHDLKELGIIDGIIPE 266 (317)
T ss_pred -cCCCHHHHHhCCCcceeccC
Confidence 57999999999999999986
No 140
>COG1030 NfeD Membrane-bound serine protease (ClpP class) [Posttranslational modification, protein turnover, chaperones]
Probab=96.05 E-value=0.07 Score=52.48 Aligned_cols=102 Identities=13% Similarity=0.088 Sum_probs=76.5
Q ss_pred HHHHHHHHHHHhhCCCCEEEEEcc---ccccchhhhhhcCCeEEEeCceeEecCCCCcCc--CC-Ccc-hHHHHh-----
Q 019601 55 FETLYQFVYLQGTFVKPHVAILDG---ITMGCGAGISLQGMYRVVTDKTVFSNPETQMGF--HP-DAG-ASFYLS----- 122 (338)
Q Consensus 55 ~~~~~~~~~~i~~~~kP~Iaav~G---~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl--~p-~~g-~~~~l~----- 122 (338)
.+.+.+++++|.+.+.||+..|.= +|.-+|..++++||+..|++.+.++-...-.+- .+ ... ......
T Consensus 71 ~~sm~~iv~~i~~s~vPV~~yv~p~ga~AaSAGtyI~m~~hiaaMAPgT~iGaa~Pi~~~g~~~~~~~~~n~~~ay~~~~ 150 (436)
T COG1030 71 LDSMRQIVRAILNSPVPVIGYVVPDGARAASAGTYILMATHIAAMAPGTNIGAATPIAGGGTSAKEANTTNAAVAYIRSL 150 (436)
T ss_pred HHHHHHHHHHHHcCCCCEEEEEcCCCcchhchhhHHHHhcChhhhCCCCcccccceecCCCCCccchhhHHHHHHHHHHH
Confidence 456778889999999998888753 599999999999999999999988876654332 11 111 112222
Q ss_pred -hccch--H-HHHHhhhCCCCCHHHHHHcCccceeccC
Q 019601 123 -HLPGY--L-GEYLALTGEKLNGVEMIACGLATHYTLN 156 (338)
Q Consensus 123 -r~~g~--~-a~~l~ltG~~~~a~eA~~~GLv~~vv~~ 156 (338)
+.-|+ . |.+++.....++++||.+.|++|-+..+
T Consensus 151 A~~~gRN~~~ae~~v~~~~~l~a~eA~~~~vid~iA~~ 188 (436)
T COG1030 151 AEERGRNPTWAERFVTENLSLTAEEALRQGVIDLIARD 188 (436)
T ss_pred HHHcCCChHHHHHHhhhccCCChhHHHhcCccccccCC
Confidence 22233 3 7899999999999999999999988765
No 141
>PRK10949 protease 4; Provisional
Probab=95.68 E-value=0.057 Score=56.10 Aligned_cols=85 Identities=9% Similarity=-0.029 Sum_probs=61.0
Q ss_pred HHHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEccccc
Q 019601 2 VGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITM 81 (338)
Q Consensus 2 ~~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a~ 81 (338)
+.++.++++++..|+.|++|||.-.+- .|.....+ +.+.+.+..+....|||||..+.. .
T Consensus 97 l~div~~i~~Aa~D~rIkgivL~i~s~---gG~~~a~~----------------~eI~~ai~~fk~sGKpVvA~~~~~-~ 156 (618)
T PRK10949 97 LFDIVNTIRQAKDDRNITGIVLDLKNF---AGADQPSM----------------QYIGKALREFRDSGKPVYAVGDSY-S 156 (618)
T ss_pred HHHHHHHHHHHhcCCCceEEEEEeCCC---CCccHHHH----------------HHHHHHHHHHHHhCCeEEEEecCc-c
Confidence 457899999999999999999998741 13333222 123344445567789999864444 4
Q ss_pred cchhhhhhcCCeEEEeCceeEecCC
Q 019601 82 GCGAGISLQGMYRVVTDKTVFSNPE 106 (338)
Q Consensus 82 GgG~~lala~D~ria~~~a~f~~pe 106 (338)
-++.-|+.+||-+++.+.+.+++..
T Consensus 157 s~~YyLASaAD~I~l~P~G~v~~~G 181 (618)
T PRK10949 157 QGQYYLASFANKIYLSPQGVVDLHG 181 (618)
T ss_pred chhhhhhhhCCEEEECCCceEEEee
Confidence 6789999999999999987765443
No 142
>COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]
Probab=95.65 E-value=0.022 Score=57.40 Aligned_cols=135 Identities=13% Similarity=0.160 Sum_probs=76.9
Q ss_pred HhhCCCCEEEEEccccccchhhhhhcCCeEEEeCce-eEecCCCCcCcCCCcchHHHHhhccchHHHHHhhhCCCCCHHH
Q 019601 65 QGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKT-VFSNPETQMGFHPDAGASFYLSHLPGYLGEYLALTGEKLNGVE 143 (338)
Q Consensus 65 i~~~~kP~Iaav~G~a~GgG~~lala~D~ria~~~a-~f~~pe~~~Gl~p~~g~~~~l~r~~g~~a~~l~ltG~~~~a~e 143 (338)
++.. .|.|+.|-|.|.|||+.+...||++|+.++. ++. + ++...+... ||+.++++|
T Consensus 160 ~Sg~-IPqIsvv~G~c~gGgaY~pal~D~~imv~~~~~mf-------l----tGP~~ik~v----------tGe~V~~e~ 217 (526)
T COG4799 160 ASGV-IPQISVVMGPCAGGGAYSPALTDFVIMVRDQSYMF-------L----TGPPVIKAV----------TGEEVSAEE 217 (526)
T ss_pred hccC-CCEEEEEEecCcccccccccccceEEEEcCCccEE-------e----eCHHHHHhh----------cCcEeehhh
Confidence 3444 9999999999999999999999999999984 322 1 122223332 344444443
Q ss_pred -----HH-Hc-CccceeccCCC-hhHHHHHHhh-cccCCh---HH------HHHHHHHhccccCCChhHHHHHHHHHhHH
Q 019601 144 -----MI-AC-GLATHYTLNGR-LPLVEERVGK-LITDDP---SI------IETSLAQYGDLVSLDRESVLRKIETIDKC 205 (338)
Q Consensus 144 -----A~-~~-GLv~~vv~~~~-l~~~~~~l~~-~~~~~~---~~------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 205 (338)
-+ +. |.++.+.++|+ ..+..+.+.. +.+... .. ...-.+.+......+.+..-+-.++|.+.
T Consensus 218 LGGa~vh~~~sGva~~~a~dd~~Ai~~vr~~lsylp~~~~~~~p~~~~~~~~~~~~~~l~~ivP~d~~~pYDvrevI~rl 297 (526)
T COG4799 218 LGGAQVHARKSGVADLLAEDDEDAIELVRRLLSYLPSNNREPPPVVPTPDEPDRDDEELDSIVPDDPRKPYDVREVIARL 297 (526)
T ss_pred ccchhhhcccccceeeeecCHHHHHHHHHHHHHhcCccCCCCCCcCCCCCCcccChhhhcccCCCCCCccccHHHHHHHh
Confidence 23 44 88988887643 2223333322 221110 00 00011111112223333333456888888
Q ss_pred cCcCCHHHHHHHHHhh
Q 019601 206 FSHDTIEEIIDALENE 221 (338)
Q Consensus 206 f~~~~~~~i~~~l~~~ 221 (338)
|-..+|.|+.....++
T Consensus 298 ~D~~~F~E~~~~~a~~ 313 (526)
T COG4799 298 VDDGEFLEFKAGYAKN 313 (526)
T ss_pred cCCccHHHHHhhhCcc
Confidence 8877999888876654
No 143
>PLN02820 3-methylcrotonyl-CoA carboxylase, beta chain
Probab=95.43 E-value=0.085 Score=54.23 Aligned_cols=73 Identities=15% Similarity=0.213 Sum_probs=51.1
Q ss_pred HhhCCCCEEEEEccccccchhhhhhcCCeEEEeCc-eeEecCCCCcCcCCCcchHHHHhhccchHHHHHhhhCCCCCHHH
Q 019601 65 QGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDK-TVFSNPETQMGFHPDAGASFYLSHLPGYLGEYLALTGEKLNGVE 143 (338)
Q Consensus 65 i~~~~kP~Iaav~G~a~GgG~~lala~D~ria~~~-a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~a~~l~ltG~~~~a~e 143 (338)
+.....|.|+++-|+|.|||..+..+||++|+++. +.+.+ ++...+.. .||+.+++++
T Consensus 201 ls~~~VP~Isvv~G~~~gGgAy~~a~~D~vim~~~~a~i~~-----------aGP~vV~~----------~~Ge~v~~ee 259 (569)
T PLN02820 201 MSSAGIPQIALVLGSCTAGGAYVPAMADESVIVKGNGTIFL-----------AGPPLVKA----------ATGEEVSAED 259 (569)
T ss_pred HhCCCCCEEEEEeCCCChHHHHHHHhCCceEEecCCcEEEe-----------cCHHHHHh----------hcCcccCHHH
Confidence 45567999999999999999999999999999884 54443 12222222 3445555544
Q ss_pred H-----H--HcCccceeccCCC
Q 019601 144 M-----I--ACGLATHYTLNGR 158 (338)
Q Consensus 144 A-----~--~~GLv~~vv~~~~ 158 (338)
. + .-|.++.+++++.
T Consensus 260 LGGa~~h~~~sGv~d~~~~de~ 281 (569)
T PLN02820 260 LGGADVHCKVSGVSDHFAQDEL 281 (569)
T ss_pred hCCHHHhcccccccccccCchH
Confidence 4 3 3788888887653
No 144
>TIGR01117 mmdA methylmalonyl-CoA decarboxylase alpha subunit. This model describes methymalonyl-CoA decarboxylase aplha subunit in archaea and bacteria. Metylmalonyl-CoA decarboxylase Na+ pump is a representative of a class of Na+ transport decarboxylases that couples the energy derived by decarboxylation of carboxylic acid substrates to drive the extrusion of Na+ ion across the membrane.
Probab=94.95 E-value=0.15 Score=52.00 Aligned_cols=76 Identities=17% Similarity=0.173 Sum_probs=50.0
Q ss_pred hCCCCEEEEEccccccchhhhhhcCCeEEEeCce-eEecCCCCcCcCCCcchHHHHhhccchHHHHHhhhCCCCCHHHHH
Q 019601 67 TFVKPHVAILDGITMGCGAGISLQGMYRVVTDKT-VFSNPETQMGFHPDAGASFYLSHLPGYLGEYLALTGEKLNGVEMI 145 (338)
Q Consensus 67 ~~~kP~Iaav~G~a~GgG~~lala~D~ria~~~a-~f~~pe~~~Gl~p~~g~~~~l~r~~g~~a~~l~ltG~~~~a~eA~ 145 (338)
+-..|+|+++.|+|.||+......||++|+++++ .+++ ++...+....|.. ++.+.+.+.+.+
T Consensus 152 s~~iP~Isvv~G~~~GG~a~~~al~D~vim~~~~a~i~~-----------aGP~vv~~~~Ge~-----v~~e~lGGa~~h 215 (512)
T TIGR01117 152 SGVVPQISAIMGPCAGGAVYSPALTDFIYMVDNTSQMFI-----------TGPQVIKTVTGEE-----VTAEQLGGAMAH 215 (512)
T ss_pred cCCCcEEEEEecCCCcHHHHHHHhcCceEEeccceEEEe-----------cChHHHHhhcCcc-----cchhhcchHHHh
Confidence 3458999999999999999888899999999964 4443 1222222222211 122334444444
Q ss_pred --HcCccceeccCCC
Q 019601 146 --ACGLATHYTLNGR 158 (338)
Q Consensus 146 --~~GLv~~vv~~~~ 158 (338)
.-|.++.+++++.
T Consensus 216 ~~~sGv~d~~~~de~ 230 (512)
T TIGR01117 216 NSVSGVAHFIAEDDD 230 (512)
T ss_pred ccccceeEEecCChH
Confidence 5899999988743
No 145
>COG0777 AccD Acetyl-CoA carboxylase beta subunit [Lipid metabolism]
Probab=94.60 E-value=0.43 Score=44.16 Aligned_cols=128 Identities=11% Similarity=0.051 Sum_probs=82.8
Q ss_pred HHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccccc
Q 019601 3 GRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMG 82 (338)
Q Consensus 3 ~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a~G 82 (338)
+.+.++++++-.+ .+.+|+++..|+ .-+.+-. ...-.+......+.++..-..|.|+.+..+..|
T Consensus 144 eki~ra~E~A~e~-k~P~v~f~aSGG-----ARMQEg~---------lSLMQMaktsaAl~~l~ea~lpyIsVLt~PTtG 208 (294)
T COG0777 144 EKITRAIERAIED-KLPLVLFSASGG-----ARMQEGI---------LSLMQMAKTSAALKRLSEAGLPYISVLTDPTTG 208 (294)
T ss_pred HHHHHHHHHHHHh-CCCEEEEecCcc-----hhHhHHH---------HHHHHHHHHHHHHHHHHhcCCceEEEecCCCcc
Confidence 3567777777664 478888887763 3332210 001112333445566778899999999999999
Q ss_pred c-hhhhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchHHHHHhhhCCCCCHHHHHHcCccceeccCCChhH
Q 019601 83 C-GAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYLGEYLALTGEKLNGVEMIACGLATHYTLNGRLPL 161 (338)
Q Consensus 83 g-G~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l~~ 161 (338)
| .+.+++..|+.||-+.|.++|...++ .-+.+...++. .--+++-.++.|+||.||+..++..
T Consensus 209 GVsASfA~lGDi~iAEP~AlIGFAGpRV-------IEQTire~LPe---------gfQ~aEfLlehG~iD~iv~R~elr~ 272 (294)
T COG0777 209 GVSASFAMLGDIIIAEPGALIGFAGPRV-------IEQTIREKLPE---------GFQTAEFLLEHGMIDMIVHRDELRT 272 (294)
T ss_pred chhHhHHhccCeeecCcccccccCcchh-------hhhhhcccCCc---------chhhHHHHHHcCCceeeecHHHHHH
Confidence 8 58899999999998888877765542 01111111111 1224566679999999999977754
No 146
>PLN02157 3-hydroxyisobutyryl-CoA hydrolase-like protein
Probab=92.65 E-value=0.21 Score=49.30 Aligned_cols=64 Identities=16% Similarity=0.176 Sum_probs=51.2
Q ss_pred HHHHHHHhcCchHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccCCCCcHHhhHhhh---hcCCCCCCCCC
Q 019601 232 KAVEKLKEASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRAR---LVDKDFAPKWD 301 (338)
Q Consensus 232 ~~a~~i~~~sp~al~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~~f---l~~k~r~p~~~ 301 (338)
+++++++..+|.++..+|+.++.. ..+....+..+...+..++. ++++.|++++| + +| |.|.|-
T Consensus 228 ~~~~~i~~~~p~av~~~k~~~~~~-~~~~~~~l~~~~~~i~~~f~---~~d~~ei~~al~~~~-~k-r~~~wa 294 (401)
T PLN02157 228 EQLKKLLTDDPSVVESCLEKCAEV-AHPEKTGVIRRIDLLEKCFS---HDTVEEIIDSLEIEA-GR-RKDTWC 294 (401)
T ss_pred HHHHHHHcCCHHHHHHHHHHHhcc-cCCcchhHHHHHHHHHHHhc---CCCHHHHHHHHHhhh-cc-cchHHH
Confidence 567888888999999999999765 23556677777777777775 89999999999 6 67 788884
No 147
>PLN02820 3-methylcrotonyl-CoA carboxylase, beta chain
Probab=92.21 E-value=0.63 Score=47.96 Aligned_cols=102 Identities=12% Similarity=-0.024 Sum_probs=67.2
Q ss_pred HHHHHHHHHHHHHHhhCCCCEEEEEccccccchhhhhh----cCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhc-c-
Q 019601 52 KNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISL----QGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHL-P- 125 (338)
Q Consensus 52 ~~~~~~~~~~~~~i~~~~kP~Iaav~G~a~GgG~~lal----a~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~-~- 125 (338)
....+...+++.++.....|.|+.|-|.|+|+|..-++ ..|++++.+++ .+|..+.-++...+.+. +
T Consensus 422 ~G~~~~~a~l~~A~a~~~VP~isvi~g~a~G~g~~aM~g~~~~~d~~~awp~A-------~i~vmg~e~aa~il~~~e~~ 494 (569)
T PLN02820 422 SGIAKAGAKMVMAVACAKVPKITIIVGGSFGAGNYGMCGRAYSPNFLFMWPNA-------RIGVMGGAQAAGVLAQIERE 494 (569)
T ss_pred hhHHHHHHHHHHHHHhCCCCEEEEEECCcchHHHHHhcCcCCCCCEEEECCCC-------eEEecCHHHHHHHHHHHHhh
Confidence 33567778889999999999999999999998754443 55666666555 45555555555555431 1
Q ss_pred -----------chH-HH-HH--hhhCCCCCHHHHHHcCccceeccCCChh
Q 019601 126 -----------GYL-GE-YL--ALTGEKLNGVEMIACGLATHYTLNGRLP 160 (338)
Q Consensus 126 -----------g~~-a~-~l--~ltG~~~~a~eA~~~GLv~~vv~~~~l~ 160 (338)
... +. +. -..-+..++..|-+.|++|.|+++.+..
T Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~aa~~~~vD~VIdP~dTR 544 (569)
T PLN02820 495 NKKRQGIQWSKEEEEAFKAKTVEAYEREANPYYSTARLWDDGVIDPADTR 544 (569)
T ss_pred hhhhccccCCccHHHHHHHHHHHHHHHhCCHHHHHHcCCcCcccCHHHHH
Confidence 111 11 10 1122356778889999999999987654
No 148
>PF01039 Carboxyl_trans: Carboxyl transferase domain; InterPro: IPR000022 Members in this domain include biotin dependent carboxylases [, ]. The carboxyl transferase domain carries out the following reaction; transcarboxylation from biotin to an acceptor molecule. There are two recognised types of carboxyl transferase. One of them uses acyl-CoA and the other uses 2-oxo acid as the acceptor molecule of carbon dioxide. All of the members in this family utilise acyl-CoA as the acceptor molecule.; GO: 0016874 ligase activity; PDB: 2F9Y_B 1XO6_B 1XNV_B 3MFM_C 3IBB_A 1XNW_F 3IAV_B 1XNY_A 3IB9_A 3U9S_F ....
Probab=88.36 E-value=0.68 Score=46.99 Aligned_cols=103 Identities=10% Similarity=-0.018 Sum_probs=65.4
Q ss_pred HHHHHHHHHHHHHHhhCCCCEEEEEccccccchhhhhhcC----CeEEEeCceeEecCCCCcCcCCCcchHHHHhhccch
Q 019601 52 KNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQG----MYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGY 127 (338)
Q Consensus 52 ~~~~~~~~~~~~~i~~~~kP~Iaav~G~a~GgG~~lala~----D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~ 127 (338)
....+...+++.++..++.|+|..|-|.+.|||....... |+++|.+++.++ +.++-++...+.+.--.
T Consensus 350 ~g~~~~ga~~~~a~~~~~vP~itvi~~~~~Gga~~am~~~~~~~~~~~Awp~a~~~-------vm~~e~a~~i~~~~~~~ 422 (493)
T PF01039_consen 350 AGIIRAGARLLYALAEATVPKITVIVRKAYGGAYYAMCGRGYGPDFVFAWPTAEIG-------VMGPEGAASILYRDELE 422 (493)
T ss_dssp TTHHHHHHHHHHHHHHH-S-EEEEEEEEEEHHHHHHTTGGGGTTSEEEEETT-EEE-------SS-HHHHHHHHTHHHHH
T ss_pred cchHHHHHHHHHHHHcCCCCEEEEEeCCccCcchhhhcccccchhhhhhhhcceee-------ecChhhhheeeehhhhh
Confidence 3445667789999999999999999999999887555544 788777777665 33333343333322100
Q ss_pred ---------HH---HHHhh-hCCCCCHHHHHHcCccceeccCCChhH
Q 019601 128 ---------LG---EYLAL-TGEKLNGVEMIACGLATHYTLNGRLPL 161 (338)
Q Consensus 128 ---------~a---~~l~l-tG~~~~a~eA~~~GLv~~vv~~~~l~~ 161 (338)
.+ ..+-- .-+..++..+...|++|.++++.+...
T Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~D~ii~p~~tR~ 469 (493)
T PF01039_consen 423 AAEAEGADPEAQRAEKIAEYEDELSSPYRAASRGYVDDIIDPAETRK 469 (493)
T ss_dssp HSCHCCHSHHHHHHHHHHHHHHHHSSHHHHHHTTSSSEESSGGGHHH
T ss_pred hhhcccchhHHHHHHHHHHHHHhcCCHHHHHhcCCCCCccCHHHHHH
Confidence 01 11111 112368899999999999999988754
No 149
>KOG0840 consensus ATP-dependent Clp protease, proteolytic subunit [Posttranslational modification, protein turnover, chaperones]
Probab=83.92 E-value=5 Score=36.87 Aligned_cols=89 Identities=16% Similarity=0.108 Sum_probs=48.4
Q ss_pred HHHhhCCCCEEEEEccccccchhhhhhcCCeEEEeCceeEecCCCCcCcC-CCcch----HHHHh---------------
Q 019601 63 YLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFH-PDAGA----SFYLS--------------- 122 (338)
Q Consensus 63 ~~i~~~~kP~Iaav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~-p~~g~----~~~l~--------------- 122 (338)
..+..++-||-..+=|.|.+-|..|..+. ++.-++.+|..++=+. |.+|. .-+.-
T Consensus 144 DtMq~ik~~V~Tic~G~Aas~aalLLaaG-----~KG~R~alPnsriMIhQP~gga~Gqa~Di~i~akE~~~~k~~l~~i 218 (275)
T KOG0840|consen 144 DTMQYIKPDVSTICVGLAASMAALLLAAG-----AKGKRYALPNSRIMIHQPSGGAGGQATDIVIQAKELMRIKEYLNEI 218 (275)
T ss_pred HHHHhhCCCceeeehhhHHhHHHHHHhcC-----CCcceeecCCceeEEeccCCCcCccchHHHHHHHHHHHHHHHHHHH
Confidence 34445666666666677776665554443 4555666666665442 22211 11100
Q ss_pred --hccchH---HHHHhhhCCCCCHHHHHHcCccceeccC
Q 019601 123 --HLPGYL---GEYLALTGEKLNGVEMIACGLATHYTLN 156 (338)
Q Consensus 123 --r~~g~~---a~~l~ltG~~~~a~eA~~~GLv~~vv~~ 156 (338)
+.-|.. ...-+-.-+.++|+||.+.||+|+|++.
T Consensus 219 ~a~~Tgq~~e~i~~d~dRd~fmsa~EA~eyGliD~v~~~ 257 (275)
T KOG0840|consen 219 YAKHTGQPLEVIEKDMDRDRFMSAEEAKEYGLIDKVIDH 257 (275)
T ss_pred HHHhcCCcHHHHHhhhcccccCCHHHHHHhcchhhhhcC
Confidence 001111 1112223356899999999999999974
No 150
>COG0074 SucD Succinyl-CoA synthetase, alpha subunit [Energy production and conversion]
Probab=76.11 E-value=9.2 Score=35.81 Aligned_cols=54 Identities=24% Similarity=0.375 Sum_probs=37.4
Q ss_pred HHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEccccc
Q 019601 4 RLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITM 81 (338)
Q Consensus 4 eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a~ 81 (338)
.+.++|+.+++||+.++||+-|.- |.+-.+ ...+ ++.+ ...+||||+.+-|.+.
T Consensus 187 ~fid~L~~fe~Dp~T~~ivmiGEi-----GG~aEe-----------~AA~-------~i~~-~~~~KPVVa~iaG~ta 240 (293)
T COG0074 187 SFIDALEMFEADPETEAIVMIGEI-----GGPAEE-----------EAAE-------YIKA-NATRKPVVAYIAGRTA 240 (293)
T ss_pred cHHHHHHHHhcCccccEEEEEecC-----CCcHHH-----------HHHH-------HHHH-hccCCCEEEEEeccCC
Confidence 467899999999999999999982 222221 1122 2222 3455999999999976
No 151
>PF02601 Exonuc_VII_L: Exonuclease VII, large subunit; InterPro: IPR020579 Exonuclease VII 3.1.11.6 from EC is composed of two nonidentical subunits; one large subunit and 4 small ones []. Exonuclease VII catalyses exonucleolytic cleavage in either 5'-3' or 3'-5' direction to yield 5'-phosphomononucleotides. The large subunit also contains the OB-fold domains (IPR004365 from INTERPRO) that bind to nucleic acids at the N terminus. This entry represents Exonuclease VII, large subunit, C-terminal. ; GO: 0008855 exodeoxyribonuclease VII activity
Probab=71.26 E-value=7.6 Score=36.86 Aligned_cols=76 Identities=12% Similarity=0.102 Sum_probs=45.6
Q ss_pred HHHHHHHHHHhcCC---CcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEccc
Q 019601 3 GRLKRLYESWEENP---DIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGI 79 (338)
Q Consensus 3 ~eL~~~l~~~~~d~---~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~ 79 (338)
.++.++|+.+.... .+-+|||.=.|+++ -||..|. -..+.++|+.++.|||++| ||
T Consensus 58 ~~I~~al~~~~~~~~~~~~Dviii~RGGGs~---eDL~~FN-----------------~e~varai~~~~~PvisaI-GH 116 (319)
T PF02601_consen 58 ASIVSALRKANEMGQADDFDVIIIIRGGGSI---EDLWAFN-----------------DEEVARAIAASPIPVISAI-GH 116 (319)
T ss_pred HHHHHHHHHHHhccccccccEEEEecCCCCh---HHhcccC-----------------hHHHHHHHHhCCCCEEEec-CC
Confidence 57888899888664 56666655443221 2444332 1367889999999999987 33
Q ss_pred cccchhhhhhcCCeEEEeCce
Q 019601 80 TMGCGAGISLQGMYRVVTDKT 100 (338)
Q Consensus 80 a~GgG~~lala~D~ria~~~a 100 (338)
-.=- .-.=+.+|+|..|+++
T Consensus 117 e~D~-ti~D~vAd~ra~TPta 136 (319)
T PF02601_consen 117 ETDF-TIADFVADLRAPTPTA 136 (319)
T ss_pred CCCc-hHHHHHHHhhCCCHHH
Confidence 2111 2233556666666643
No 152
>TIGR00237 xseA exodeoxyribonuclease VII, large subunit. This family consist of exodeoxyribonuclease VII, large subunit XseA which catalyses exonucleolytic cleavage in either the 5'-3' or 3'-5' direction to yield 5'-phosphomononucleotides. Exonuclease VII consists of one large subunit and four small subunits.
Probab=70.64 E-value=7.3 Score=38.88 Aligned_cols=75 Identities=9% Similarity=0.006 Sum_probs=45.4
Q ss_pred HHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccccc
Q 019601 3 GRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMG 82 (338)
Q Consensus 3 ~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a~G 82 (338)
.++.++++.++..+++.+|||.=.|+++ -||..|. -..+.++|+.|+.|||++| ||-.-
T Consensus 173 ~~i~~al~~~~~~~~~dviii~RGGGs~---eDL~~Fn-----------------~e~~~rai~~~~~Pvis~i-GHe~D 231 (432)
T TIGR00237 173 QSIVESIELANTKNECDVLIVGRGGGSL---EDLWSFN-----------------DEKVARAIFLSKIPIISAV-GHETD 231 (432)
T ss_pred HHHHHHHHHhhcCCCCCEEEEecCCCCH---HHhhhcC-----------------cHHHHHHHHcCCCCEEEec-CcCCC
Confidence 4678888888876656666555443322 2444432 1357889999999999977 22111
Q ss_pred chhhhhhcCCeEEEeCc
Q 019601 83 CGAGISLQGMYRVVTDK 99 (338)
Q Consensus 83 gG~~lala~D~ria~~~ 99 (338)
=.-.=+.+|.|..|++
T Consensus 232 -~ti~D~vAd~ra~TPt 247 (432)
T TIGR00237 232 -FTISDFVADLRAPTPS 247 (432)
T ss_pred -ccHHHHhhhccCCCcH
Confidence 0223356777777664
No 153
>PTZ00187 succinyl-CoA synthetase alpha subunit; Provisional
Probab=67.91 E-value=15 Score=35.14 Aligned_cols=54 Identities=17% Similarity=0.308 Sum_probs=36.3
Q ss_pred HHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEccccc
Q 019601 4 RLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITM 81 (338)
Q Consensus 4 eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a~ 81 (338)
.+.++|+.+++||++++|++.+.+. |.+-. +..+|++. ....||||+.+-|...
T Consensus 211 ~~~D~L~~~~~Dp~T~~Ivl~~E~g----G~~e~------------~aa~fi~~--------~~~~KPVVa~~aGrsa 264 (317)
T PTZ00187 211 NFIDCLKLFLNDPETEGIILIGEIG----GTAEE------------EAAEWIKN--------NPIKKPVVSFIAGITA 264 (317)
T ss_pred CHHHHHHHHhhCCCccEEEEEEecC----CchhH------------HHHHHHHh--------hcCCCcEEEEEecCCC
Confidence 3568899999999999999999831 11111 11223322 2468999999999864
No 154
>PF13607 Succ_CoA_lig: Succinyl-CoA ligase like flavodoxin domain; PDB: 2CSU_A.
Probab=64.47 E-value=18 Score=30.17 Aligned_cols=50 Identities=24% Similarity=0.302 Sum_probs=26.2
Q ss_pred HHHHHHHHhcCCCcEEEEEEeCC-CCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccc
Q 019601 5 LKRLYESWEENPDIGFVLMKGAG-RAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGIT 80 (338)
Q Consensus 5 L~~~l~~~~~d~~v~~vVl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a 80 (338)
+.+.++.+..||++++|++.-.+ + |- +.+.+..++.... ||||+..-|..
T Consensus 42 ~~d~l~~~~~D~~t~~I~ly~E~~~------d~-------------------~~f~~~~~~a~~~-KPVv~lk~Grt 92 (138)
T PF13607_consen 42 FADLLEYLAEDPDTRVIVLYLEGIG------DG-------------------RRFLEAARRAARR-KPVVVLKAGRT 92 (138)
T ss_dssp HHHHHHHHCT-SS--EEEEEES--S-------H-------------------HHHHHHHHHHCCC-S-EEEEE----
T ss_pred HHHHHHHHhcCCCCCEEEEEccCCC------CH-------------------HHHHHHHHHHhcC-CCEEEEeCCCc
Confidence 45677777777777777777764 1 11 2233445555555 99999999983
No 155
>smart00250 PLEC Plectin repeat.
Probab=57.97 E-value=7.9 Score=24.55 Aligned_cols=18 Identities=39% Similarity=0.470 Sum_probs=16.9
Q ss_pred hCCCCCHHHHHHcCccce
Q 019601 135 TGEKLNGVEMIACGLATH 152 (338)
Q Consensus 135 tG~~~~a~eA~~~GLv~~ 152 (338)
||+++|-.||.+.||++.
T Consensus 18 t~~~lsv~eA~~~glid~ 35 (38)
T smart00250 18 TGQKLSVEEALRRGLIDP 35 (38)
T ss_pred CCCCcCHHHHHHcCCCCc
Confidence 899999999999999985
No 156
>PLN02522 ATP citrate (pro-S)-lyase
Probab=57.34 E-value=27 Score=36.44 Aligned_cols=52 Identities=23% Similarity=0.326 Sum_probs=36.5
Q ss_pred HHHHHHHHhcCCCcEEEEEEeC-CCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEccccc
Q 019601 5 LKRLYESWEENPDIGFVLMKGA-GRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITM 81 (338)
Q Consensus 5 L~~~l~~~~~d~~v~~vVl~g~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a~ 81 (338)
+.+.|+.++.||++++|++.+. |. -|-..+ . +..++.. ..||||+.+-|.+.
T Consensus 210 ~~D~L~~~~~Dp~Tk~IvlygEiGg-----~~e~~f---------------~----ea~~~a~-~~KPVVa~kaGrsa 262 (608)
T PLN02522 210 LSDHVLRFNNIPQIKMIVVLGELGG-----RDEYSL---------------V----EALKQGK-VSKPVVAWVSGTCA 262 (608)
T ss_pred HHHHHHHHhcCCCCCEEEEEEecCc-----hhHHHH---------------H----HHHHHhc-CCCCEEEEeccCCC
Confidence 6788999999999999999998 52 121221 1 1222222 68999999999987
No 157
>KOG0540 consensus 3-Methylcrotonyl-CoA carboxylase, non-biotin containing subunit/Acetyl-CoA carboxylase carboxyl transferase, subunit beta [Amino acid transport and metabolism; Lipid transport and metabolism]
Probab=56.19 E-value=37 Score=33.93 Aligned_cols=120 Identities=13% Similarity=0.040 Sum_probs=77.5
Q ss_pred CCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEccccccchhh---hhhcC
Q 019601 15 NPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAG---ISLQG 91 (338)
Q Consensus 15 d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a~GgG~~---lala~ 91 (338)
...+..|.|...++ |--|.+.+... ..+....++.+...-..|-|..+.|.+.||-.. -.+.-
T Consensus 382 q~~IPLi~l~ni~G-fm~g~~~e~~g-------------IaK~gAklv~a~a~akvpkITiit~~syGG~y~m~sr~~~g 447 (536)
T KOG0540|consen 382 QRNIPLIFLQNITG-FMVGRAAEAGG-------------IAKHGAKLVYAVACAKVPKITIITGGSYGGNYAMCSRGYSG 447 (536)
T ss_pred hcCCcEEEEEccCC-ccccchhhhhc-------------hhhhhhhhhhhhhhccCceEEEEecCccCCcccccccccCC
Confidence 34577777777765 88887776532 234455678888888999999999999997544 55677
Q ss_pred CeEEEeCceeEecCCCCcCcCCCcchHHHHhhc-----c--chHHHHHhhhCCCCCHHHHHHcCccceeccCCChh
Q 019601 92 MYRVVTDKTVFSNPETQMGFHPDAGASFYLSHL-----P--GYLGEYLALTGEKLNGVEMIACGLATHYTLNGRLP 160 (338)
Q Consensus 92 D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~-----~--g~~a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l~ 160 (338)
|+.++.++|++++-..+ ++.-.+.+. . +....+.+ |.++. |...||+|.++++.+..
T Consensus 448 d~~yawP~A~IavmG~~-------~a~~Vi~q~~~e~a~~~~~~~~E~f--~npy~---a~~Rg~~D~II~p~~tR 511 (536)
T KOG0540|consen 448 DINYAWPNARIAVMGGK-------QAANVIFQITLEKAVALKAPYIEKF--GNPYY---AAARGWDDGIIDPSDTR 511 (536)
T ss_pred ceeEEcccceeeecccc-------chhhhhhhhhhhhhhhhcchHHHHh--cCccH---HHHhhccccccChhHhh
Confidence 88888888877654331 112222222 1 11223333 55444 46789999999887664
No 158
>COG1570 XseA Exonuclease VII, large subunit [DNA replication, recombination, and repair]
Probab=55.31 E-value=24 Score=35.20 Aligned_cols=54 Identities=13% Similarity=0.215 Sum_probs=36.1
Q ss_pred HHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEE
Q 019601 3 GRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAIL 76 (338)
Q Consensus 3 ~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav 76 (338)
.++.++++.++..+++.++|+.=. |+.+.++-. | .-..+.++|+.++.|||++|
T Consensus 179 ~eIv~aI~~an~~~~~DvlIVaRG------GGSiEDLW~------------F--NdE~vaRAi~~s~iPvISAV 232 (440)
T COG1570 179 EEIVEAIERANQRGDVDVLIVARG------GGSIEDLWA------------F--NDEIVARAIAASRIPVISAV 232 (440)
T ss_pred HHHHHHHHHhhccCCCCEEEEecC------cchHHHHhc------------c--ChHHHHHHHHhCCCCeEeec
Confidence 467788888888777776665433 333443321 1 12357889999999999987
No 159
>PRK00286 xseA exodeoxyribonuclease VII large subunit; Reviewed
Probab=54.83 E-value=18 Score=36.02 Aligned_cols=74 Identities=11% Similarity=0.036 Sum_probs=43.1
Q ss_pred HHHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccccc
Q 019601 3 GRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMG 82 (338)
Q Consensus 3 ~eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a~G 82 (338)
.++.++++.++... +.+|||.=.|+++ -||..|. -..+.++|+.|+.|||++| ||-.=
T Consensus 179 ~~i~~al~~~~~~~-~Dviii~RGGGS~---eDL~~Fn-----------------~e~v~~ai~~~~~Pvis~I-GHE~D 236 (438)
T PRK00286 179 ASIVAAIERANARG-EDVLIVARGGGSL---EDLWAFN-----------------DEAVARAIAASRIPVISAV-GHETD 236 (438)
T ss_pred HHHHHHHHHhcCCC-CCEEEEecCCCCH---HHhhccC-----------------cHHHHHHHHcCCCCEEEec-cCCCC
Confidence 46788888877643 4444443332221 2444432 1367889999999999977 22110
Q ss_pred chhhhhhcCCeEEEeCc
Q 019601 83 CGAGISLQGMYRVVTDK 99 (338)
Q Consensus 83 gG~~lala~D~ria~~~ 99 (338)
=.-.=+.+|.|..|++
T Consensus 237 -~tl~D~vAd~ra~TPt 252 (438)
T PRK00286 237 -FTIADFVADLRAPTPT 252 (438)
T ss_pred -ccHHHHhhhccCCChH
Confidence 1233456777777764
No 160
>PLN00125 Succinyl-CoA ligase [GDP-forming] subunit alpha
Probab=50.22 E-value=39 Score=32.05 Aligned_cols=53 Identities=23% Similarity=0.348 Sum_probs=30.2
Q ss_pred HHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEccccc
Q 019601 5 LKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITM 81 (338)
Q Consensus 5 L~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a~ 81 (338)
+.+.|+.+..||++++|++...+ .|.+++.- .+|++ ... ..||||+..-|..-
T Consensus 193 ~~d~L~yl~~Dp~T~~I~ly~E~----~G~~~~d~------------~~f~~-------aa~-~~KPVV~lk~Grs~ 245 (300)
T PLN00125 193 FVDCLEKFVKDPQTEGIILIGEI----GGTAEEDA------------AAFIK-------ESG-TEKPVVAFIAGLTA 245 (300)
T ss_pred HHHHHHHHhhCCCCcEEEEEecc----CCchHHHH------------HHHHH-------Hhc-CCCCEEEEEecCCC
Confidence 45666666666666766666662 12232221 12222 211 38999999999864
No 161
>PF00681 Plectin: Plectin repeat; InterPro: IPR001101 Plectin may have a role in cross-linking intermediate filaments, in inter-linking intermediate filaments with microtubules and microfilaments and in anchoring intermediate filaments to the plasma and nuclear membranes. Plectin is recruited into hemidesmosomes, multiprotein complexes that facilitate adhesion of epithelia to the basement membrane, thereby providing linkage between the intracellular keratin filaments to the laminins of the extracellular matrix. Plectin binds to hemidesmosomes through association of its actin-binding domain with the first pair of fibronectin type III repeats and a small part of the connecting segment of the integrin-beta4 subunit, the latter (integrin-alpha6,beta4) acting as a receptor for the extracellular matrix component laminin-5. The plectin repeat is also seen in the cell adhesion junction plaque proteins, desmoplakin, envoplakin, and bullous pemphigoid antigen. The domains in plakins show considerable sequence homology. The N terminus consists of a plakin domain containing a number of subdomains with high alpha-helical content, while the central coiled-coil domain is composed of heptad repeats involved in the dimerisation of plakin, and the C terminus contains one or more homologous repeat sequences referred to plectin repeats []. This entry represents the plectin repeats found in the C terminus of plakin proteins.; GO: 0005856 cytoskeleton; PDB: 1LM7_A 1LM5_A.
Probab=47.47 E-value=7.3 Score=25.75 Aligned_cols=19 Identities=42% Similarity=0.464 Sum_probs=16.4
Q ss_pred hhCCCCCHHHHHHcCccce
Q 019601 134 LTGEKLNGVEMIACGLATH 152 (338)
Q Consensus 134 ltG~~~~a~eA~~~GLv~~ 152 (338)
-||++++-++|.+.||++.
T Consensus 17 ~tg~~lsv~~A~~~glId~ 35 (45)
T PF00681_consen 17 ETGERLSVEEAIQRGLIDS 35 (45)
T ss_dssp TTTEEEEHHHHHHTTSS-H
T ss_pred CCCeEEcHHHHHHCCCcCH
Confidence 4789999999999999986
No 162
>PF00549 Ligase_CoA: CoA-ligase; InterPro: IPR005811 This entry represents a domain found in both the alpha and beta chains of succinyl-CoA synthase (6.2.1.4 from EC (GDP-forming) and 6.2.1.5 from EC (ADP-forming)) [, ]. This domain can also be found in ATP citrate synthase (2.3.3.8 from EC) and malate-CoA ligase (6.2.1.9 from EC). Some members of the domain utilise ATP others use GTP.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 3DMY_B 3MWE_B 3PFF_A 3MWD_B 2YV1_A 1EUC_A 2FP4_A 1EUD_A 2FPI_A 2FPG_A ....
Probab=44.69 E-value=35 Score=29.00 Aligned_cols=62 Identities=15% Similarity=0.088 Sum_probs=37.5
Q ss_pred HHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccccc
Q 019601 4 RLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMG 82 (338)
Q Consensus 4 eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a~G 82 (338)
...++|..+.+||++++|++-+.+.+=++ .+.. ..+...+..... ...++|+|+.+.|-..-
T Consensus 60 ~~~~~l~~~~~Dp~v~vIlvd~~~G~g~~----~~~A-----------~~l~~a~~~~~~--~~~~~pvVa~v~GT~~d 121 (153)
T PF00549_consen 60 TRNEALEIEAADPEVKVILVDIVGGIGSC----EDPA-----------AGLIPAIKEAKA--EGRKKPVVARVCGTNAD 121 (153)
T ss_dssp HHHHHHHHHHTSTTESEEEEEEESSSSSH----HHHH-----------HHHHHHHSHCTH--TTT-SEEEEEEESTTCH
T ss_pred HHHHHHHHHhcCCCccEEEEEeccccCch----HHHH-----------HHHHHHHHhccc--cCCCCcEEEEeeeecCC
Confidence 46788999999999999999997642111 1111 111111110000 34789999999998765
No 163
>COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]
Probab=42.84 E-value=33 Score=35.08 Aligned_cols=55 Identities=7% Similarity=0.166 Sum_probs=40.1
Q ss_pred hhHHHHHHHHHHHHHHHhhCCCCEEEEEccccccchhhhh----hcCCeEEEeCceeEe
Q 019601 49 EDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGIS----LQGMYRVVTDKTVFS 103 (338)
Q Consensus 49 ~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a~GgG~~la----la~D~ria~~~a~f~ 103 (338)
.+.....+...+++.++....+|.|..|-|.+.|||...+ +..|+.+|.+++.++
T Consensus 377 ~E~~giik~Gakl~~A~aeatVPkitvI~rkayGga~~~M~~~~~~~~~~~AwP~a~ia 435 (526)
T COG4799 377 QEYGGIIKHGAKLLYAVAEATVPKITVITRKAYGGAYYVMGGKALGPDFNYAWPTAEIA 435 (526)
T ss_pred HHhChHHHhhhHHHhhHhhccCCeEEEEecccccceeeeecCccCCCceeEecCcceee
Confidence 3334556778899999999999999999999999995443 345555555554443
No 164
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=35.90 E-value=61 Score=32.03 Aligned_cols=38 Identities=16% Similarity=0.300 Sum_probs=27.1
Q ss_pred ccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhh
Q 019601 30 FCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGT 67 (338)
Q Consensus 30 F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 67 (338)
||.|+||..+......-..+..+.|++.+...+..++.
T Consensus 90 yC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~ 127 (429)
T KOG0595|consen 90 YCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHE 127 (429)
T ss_pred eCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 79999999987765444455667777777766666554
No 165
>TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain. Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff.
Probab=33.85 E-value=98 Score=30.97 Aligned_cols=52 Identities=21% Similarity=0.273 Sum_probs=33.7
Q ss_pred HHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEccccc
Q 019601 5 LKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITM 81 (338)
Q Consensus 5 L~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a~ 81 (338)
+.+.++.+..|+++++|++...+ + .| .. .+....++... .||||+..-|..-
T Consensus 191 ~~d~l~~l~~D~~t~~I~ly~E~--~---~~---------------~~----~f~~aa~~a~~-~KPVv~~k~Grs~ 242 (447)
T TIGR02717 191 ESDLLEYLADDPDTKVILLYLEG--I---KD---------------GR----KFLKTAREISK-KKPIVVLKSGTSE 242 (447)
T ss_pred HHHHHHHHhhCCCCCEEEEEecC--C---CC---------------HH----HHHHHHHHHcC-CCCEEEEecCCCh
Confidence 45777777778888888887764 0 01 11 22233444444 8999999999974
No 166
>PRK06091 membrane protein FdrA; Validated
Probab=30.95 E-value=1.4e+02 Score=30.88 Aligned_cols=22 Identities=27% Similarity=0.250 Sum_probs=15.3
Q ss_pred HHHHHhhCCCCEEEEEcccccc
Q 019601 61 FVYLQGTFVKPHVAILDGITMG 82 (338)
Q Consensus 61 ~~~~i~~~~kP~Iaav~G~a~G 82 (338)
++.....+.||||+..-|..--
T Consensus 271 fl~aar~~~KPVVvlk~Grs~~ 292 (555)
T PRK06091 271 IINAMKATGKPVVALFLGYTPA 292 (555)
T ss_pred HHHHHhhCCCCEEEEEecCCch
Confidence 3334445599999999997543
No 167
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=28.70 E-value=1.6e+02 Score=27.79 Aligned_cols=23 Identities=26% Similarity=0.507 Sum_probs=16.7
Q ss_pred HHHHHHHHhcCCCcEEEEEEeCC
Q 019601 5 LKRLYESWEENPDIGFVLMKGAG 27 (338)
Q Consensus 5 L~~~l~~~~~d~~v~~vVl~g~g 27 (338)
+.+.|+.+..||++++|++...+
T Consensus 188 ~~D~l~~l~~Dp~T~~I~lylE~ 210 (291)
T PRK05678 188 FIDVLEAFEEDPETEAIVMIGEI 210 (291)
T ss_pred HHHHHHHHhhCCCCcEEEEEEec
Confidence 56677777777777777777763
No 168
>PF06833 MdcE: Malonate decarboxylase gamma subunit (MdcE); InterPro: IPR009648 This family consists of several bacterial malonate decarboxylase gamma subunit proteins. Malonate decarboxylase of Klebsiella pneumoniae consists of four different subunits and catalyses the conversion of malonate plus H+ to acetate and CO2. The catalysis proceeds via acetyl and malonyl thioester residues with the phosphribosyl-dephospho-CoA prosthetic group of the acyl carrier protein (ACP) subunit. MdcD and E together probably function as malonyl-S-ACP decarboxylase []. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase, while the gamma subunit appears either to mediate subunit interaction or to act as a co-decarboxylase with the beta subunit. The beta and gamma subunits exhibit some local sequence similarity.
Probab=28.31 E-value=1e+02 Score=28.17 Aligned_cols=97 Identities=12% Similarity=-0.037 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHhhCCCCEEEEEccccccchh-hhhhcCCeEEEeCceeEecCCCCcCcCCCcchHHHHhhccchHHHHH
Q 019601 54 FFETLYQFVYLQGTFVKPHVAILDGITMGCGA-GISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYLGEYL 132 (338)
Q Consensus 54 ~~~~~~~~~~~i~~~~kP~Iaav~G~a~GgG~-~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~g~~a~~l 132 (338)
++....+.+...+.-.-|||+.|-|.+++||| .-.+.+|-+||-++ +.+-.- +--+..+..++.=..-.++
T Consensus 90 alAhla~a~a~AR~~GHpvI~Lv~G~A~SGaFLA~GlqA~rl~AL~g-------a~i~vM-~~~s~ARVTk~~ve~Le~l 161 (234)
T PF06833_consen 90 ALAHLAKAYALARLAGHPVIGLVYGKAMSGAFLAHGLQANRLIALPG-------AMIHVM-GKPSAARVTKRPVEELEEL 161 (234)
T ss_pred HHHHHHHHHHHHHHcCCCeEEEEecccccHHHHHHHHHhcchhcCCC-------CeeecC-ChHHhHHHhhcCHHHHHHH
Confidence 34445556666678899999999999988884 56778888777553 332221 1122222332211112333
Q ss_pred hhhCCC--CCHHHHHHcCccceeccCCC
Q 019601 133 ALTGEK--LNGVEMIACGLATHYTLNGR 158 (338)
Q Consensus 133 ~ltG~~--~~a~eA~~~GLv~~vv~~~~ 158 (338)
.-+--. .+.+--.++|.++++.+.+.
T Consensus 162 a~s~PvfA~gi~ny~~lG~l~~l~~~~~ 189 (234)
T PF06833_consen 162 AKSVPVFAPGIENYAKLGALDELWDGDL 189 (234)
T ss_pred hhcCCCcCCCHHHHHHhccHHHHhcccc
Confidence 322222 34556668888888887543
No 169
>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit. ATP citrate lyases appear to form an outgroup.
Probab=28.00 E-value=1.7e+02 Score=27.50 Aligned_cols=24 Identities=21% Similarity=0.450 Sum_probs=18.6
Q ss_pred HHHHHHHHHhcCCCcEEEEEEeCC
Q 019601 4 RLKRLYESWEENPDIGFVLMKGAG 27 (338)
Q Consensus 4 eL~~~l~~~~~d~~v~~vVl~g~g 27 (338)
.+.+.|+.+..||++++|++...+
T Consensus 185 ~~~D~l~~l~~Dp~T~~I~lylE~ 208 (286)
T TIGR01019 185 SFIDVLEAFEKDPETEAIVMIGEI 208 (286)
T ss_pred CHHHHHHHHhhCCCCcEEEEEEec
Confidence 356778888888888888888773
No 170
>PRK14053 methyltransferase; Provisional
Probab=27.69 E-value=94 Score=27.27 Aligned_cols=37 Identities=22% Similarity=0.431 Sum_probs=30.3
Q ss_pred HHHHHHHHhcCCCcEEEEEEeCC-CCccccCChHHHHH
Q 019601 5 LKRLYESWEENPDIGFVLMKGAG-RAFCSGGDVIALYQ 41 (338)
Q Consensus 5 L~~~l~~~~~d~~v~~vVl~g~g-~~F~aG~Dl~~~~~ 41 (338)
+.+.+..+-.||++|.+||+|.. +..-+|--|..+..
T Consensus 52 IEKvI~NvisNpNIRflilcG~Ev~GHltGqsL~aL~~ 89 (194)
T PRK14053 52 VEKIIVNVISNSNIRYVLLCGGESRGHLAGHSLLAIHA 89 (194)
T ss_pred HHHHHHHhhcCCCceEEEEecCccCCccccHHHHHHHH
Confidence 45667778889999999999987 78888888877764
No 171
>PRK00964 tetrahydromethanopterin S-methyltransferase subunit A; Provisional
Probab=24.42 E-value=1.1e+02 Score=27.66 Aligned_cols=37 Identities=22% Similarity=0.476 Sum_probs=30.0
Q ss_pred HHHHHHHHhcCCCcEEEEEEeCC-CCccccCChHHHHH
Q 019601 5 LKRLYESWEENPDIGFVLMKGAG-RAFCSGGDVIALYQ 41 (338)
Q Consensus 5 L~~~l~~~~~d~~v~~vVl~g~g-~~F~aG~Dl~~~~~ 41 (338)
+.+.+..+-.||++|.+|++|.. +..-+|--|..+..
T Consensus 59 IEKvI~NvisNpNIRflilcG~Ev~GH~tGqsl~aL~~ 96 (225)
T PRK00964 59 IEKVIANVISNPNIRFLILCGSEVQGHITGQSLKALHE 96 (225)
T ss_pred HHHHHHHHhcCCCceEEEEecCccCCccccHHHHHHHH
Confidence 45677778889999999999997 77778877777654
No 172
>PF04208 MtrA: Tetrahydromethanopterin S-methyltransferase, subunit A ; InterPro: IPR013340 This domain is mostly found in N5-methyltetrahydromethanopterin: coenzyme M methyltransferase subunit A (MtrA) in methanogenic archaea. This methyltranferase is a membrane-associated enzyme complex that uses methyl-transfer reaction to drive sodium-ion pump. 5-methyl-5,6,7,8-tetrahydromethanopterin + 2-mercaptoethanesulphonate = 5,6,7,8-tetrahydromethanopterin + 2-(methylthio)ethanesulphonate. Archaea have evolved energy-yielding pathways marked by one-carbon biochemistry featuring novel cofactors and enzymes. This transferase (encoded by subunit A) is involved in the transfer of 'methyl' group from N5-methyltetrahydromethanopterin to coenzyme M. In an accompanying reaction, methane is produced by two-electron reduction of methyl-coenzyme M by another enzyme, methyl-coenzyme M reductase. In some organisms this domain is found at the N-terminal region of what appears to be a fusion of the MtrA and MtrF proteins [, ]. The function of these proteins is unknown, though it is likely that they are involved in C1 metabolism. ; GO: 0008168 methyltransferase activity, 0030269 tetrahydromethanopterin S-methyltransferase activity
Probab=24.27 E-value=1e+02 Score=26.69 Aligned_cols=37 Identities=22% Similarity=0.527 Sum_probs=29.3
Q ss_pred HHHHHHHHhcCCCcEEEEEEeCC-CCccccCChHHHHH
Q 019601 5 LKRLYESWEENPDIGFVLMKGAG-RAFCSGGDVIALYQ 41 (338)
Q Consensus 5 L~~~l~~~~~d~~v~~vVl~g~g-~~F~aG~Dl~~~~~ 41 (338)
+...+..+-.||++|.+|++|.. +..-+|--|..+..
T Consensus 55 IEKvI~NvisNpnIRflilcG~Ev~GH~~Gqsl~aLh~ 92 (176)
T PF04208_consen 55 IEKVIANVISNPNIRFLILCGSEVKGHLTGQSLLALHE 92 (176)
T ss_pred HHHHHHHHhcCCCceEEEEecCccCCCcchHHHHHHHH
Confidence 45677888899999999999987 76777777766643
No 173
>PF13877 RPAP3_C: Potential Monad-binding region of RPAP3
Probab=24.11 E-value=1.7e+02 Score=22.15 Aligned_cols=49 Identities=16% Similarity=0.271 Sum_probs=36.4
Q ss_pred HHHhHHcCcCCHHHHHHHHHhhhcccccHHHHHHHHHHHhcCchHHHHH
Q 019601 200 ETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKEASPLSLKVT 248 (338)
Q Consensus 200 ~~i~~~f~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~sp~al~~~ 248 (338)
.++...++.+-+.+|+..|.......+..++.++++.+++.+++.+.+.
T Consensus 38 ~if~~~l~~~~L~~il~~l~~~~~~~~~~~i~~~L~~L~~~~RF~l~~~ 86 (94)
T PF13877_consen 38 KIFKNSLEPEFLSEILEALNEHFIPEDPEFIFEILEALSKVKRFDLAVM 86 (94)
T ss_pred HHHHccCCHHHHHHHHHHHHHHHccCCHHHHHHHHHHhcCCCCHHHHHH
Confidence 3444444666788899998876665666788899999999888887753
No 174
>TIGR01111 mtrA N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit A. coenzyme M methyltransferase subunit A in methanogenic archaea. This methyltranferase is a membrane-associated enzyme complex that uses methyl-transfer reaction to drive sodium-ion pump. Archaea have evolved energy-yielding pathways marked by one-carbon biochemistry featuring novel cofactors and enzymes. This transferase (encoded by subunit A) is involved in the transfer of 'methyl' group from N5-methyltetrahydromethanopterin to coenzyme M. In an accompanying reaction, methane is produced by two-electron reduction of methyl-coenzyme M by another enzyme, methyl-coenzyme M reductase.
Probab=24.10 E-value=1.2e+02 Score=27.59 Aligned_cols=37 Identities=22% Similarity=0.464 Sum_probs=30.2
Q ss_pred HHHHHHHHhcCCCcEEEEEEeCC-CCccccCChHHHHH
Q 019601 5 LKRLYESWEENPDIGFVLMKGAG-RAFCSGGDVIALYQ 41 (338)
Q Consensus 5 L~~~l~~~~~d~~v~~vVl~g~g-~~F~aG~Dl~~~~~ 41 (338)
+.+.+..+-.||++|.+|++|.. +..-+|--|..+..
T Consensus 59 IEKvIaNvisNpNIRflilcG~Ev~GHltGqsL~aLh~ 96 (238)
T TIGR01111 59 IEKVVANIISNPNIRFLILCGSEVQGHITGQSFKALHE 96 (238)
T ss_pred HHHHHHHHhcCCCceEEEEecCcccCccccHHHHHHHH
Confidence 45677778889999999999987 78888888877754
No 175
>PF14842 FliG_N: FliG N-terminal domain; PDB: 3HJL_A 3AJC_A 3USY_B.
Probab=22.78 E-value=1.5e+02 Score=23.37 Aligned_cols=67 Identities=18% Similarity=0.228 Sum_probs=31.4
Q ss_pred ccCCChhHHHHHHhhcccCChHHHHHHHHHhcc----ccCCChhHHHHHHHHHhHHcCcCCHHHHHHHHHh
Q 019601 154 TLNGRLPLVEERVGKLITDDPSIIETSLAQYGD----LVSLDRESVLRKIETIDKCFSHDTIEEIIDALEN 220 (338)
Q Consensus 154 v~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~~f~~~~~~~i~~~l~~ 220 (338)
.+++++..+..++.++..-++..+...+.+|.. ......-....-.+++.+.|..+..++|++.+..
T Consensus 30 l~~~ei~~i~~~ma~l~~v~~~~~~~Vl~EF~~~~~~~~~~~~gg~~~~~~lL~~alg~~~a~~il~~~~~ 100 (108)
T PF14842_consen 30 LDEEEIERISREMAKLGSVSPEEVEEVLEEFYDEIRAQGGIVSGGRDFARRLLEKALGEEKAKEILDRLEQ 100 (108)
T ss_dssp S-HHHHHHHHHHHHT-----HHHHHHHHHHHHHHHHHTT---S-HHHHHHH-HHHHS---HHHHH------
T ss_pred CCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHccccccChHHHHHHHHHHHCCHHHHHHHHHHHhc
Confidence 456677777777777777788888888888776 2223333333444666667777666666666653
No 176
>PRK13505 formate--tetrahydrofolate ligase; Provisional
Probab=22.45 E-value=1.6e+02 Score=30.49 Aligned_cols=76 Identities=18% Similarity=0.146 Sum_probs=51.4
Q ss_pred CCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEccccccchhhhhhcCCeE
Q 019601 15 NPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYR 94 (338)
Q Consensus 15 d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a~GgG~~lala~D~r 94 (338)
.|+.-++|-|-..=-+-.|.+...+. ..+.+....-+..+.+.+..+..+..|+|.+||-+..---.++..--+++
T Consensus 322 ~P~~~VlVaTvraLK~hgg~~~~~l~----~en~Eal~sGl~NL~RHIenvr~FGvPvVVAINKFd~DTe~Ei~~I~~~c 397 (557)
T PRK13505 322 KPDAVVIVATVRALKMHGGVAKDDLK----EENVEALKKGFANLERHIENIRKFGVPVVVAINKFVTDTDAEIAALKELC 397 (557)
T ss_pred CCCEEEEEeehHHHHHcCCCChhhcc----ccCHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCCCHHHHHHHHHHH
Confidence 46555555554442356677776653 33456666667778888888999999999999998776665555444443
No 177
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=20.99 E-value=1.8e+02 Score=26.30 Aligned_cols=40 Identities=13% Similarity=0.072 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHhhCC--CCEEEEEccccccchhhhhhcCCeE
Q 019601 55 FETLYQFVYLQGTFV--KPHVAILDGITMGCGAGISLQGMYR 94 (338)
Q Consensus 55 ~~~~~~~~~~i~~~~--kP~Iaav~G~a~GgG~~lala~D~r 94 (338)
...+...+..+...+ .+.=..+-|.|+||++.+.+++...
T Consensus 93 ~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~ 134 (236)
T COG0412 93 LADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP 134 (236)
T ss_pred HHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC
Confidence 344444555555555 3444567799999999999999874
No 178
>KOG1255 consensus Succinyl-CoA synthetase, alpha subunit [Energy production and conversion]
Probab=20.02 E-value=2.3e+02 Score=26.14 Aligned_cols=56 Identities=23% Similarity=0.412 Sum_probs=36.4
Q ss_pred HHHHHHHHHhcCCCcEEEEEEeCCCCccccCChHHHHHHhccCChhhHHHHHHHHHHHHHHHhhCCCCEEEEEcccc
Q 019601 4 RLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGIT 80 (338)
Q Consensus 4 eL~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a 80 (338)
.+.++|+.+-.|++.+.||+-|.-. +.- .++..+|.... .-..-+||||+.+.|..
T Consensus 218 ~FID~L~vFl~D~~t~GIiliGEIG-----G~A-----------Ee~AA~flk~~-----nSg~~~kPVvsFIAG~t 273 (329)
T KOG1255|consen 218 NFIDCLEVFLEDPETEGIILIGEIG-----GSA-----------EEEAAEFLKEY-----NSGSTAKPVVSFIAGVT 273 (329)
T ss_pred cHHHHHHHHhcCcccceEEEEeccC-----Chh-----------hHHHHHHHHHh-----ccCCCCCceeEEeeccc
Confidence 4678999999999999999999721 111 12222232211 12457899999998864
Done!