BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019602
(338 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9T0K7|HIBC6_ARATH 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial
OS=Arabidopsis thaliana GN=At4g13360 PE=1 SV=2
Length = 421
Score = 454 bits (1169), Expect = e-127, Method: Compositional matrix adjust.
Identities = 215/291 (73%), Positives = 251/291 (86%)
Query: 48 EVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLF 107
+VFTAEY+LIC I+ YKKPYISLMDG+TMGFG+G+SGHGRYR++TE+T+LAMPENGIGLF
Sbjct: 131 KVFTAEYTLICAIAAYKKPYISLMDGITMGFGLGLSGHGRYRVITERTVLAMPENGIGLF 190
Query: 108 PDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAV 167
PDVGFSYIAA PGGGSVGAYLG+TGKRIS PSDALF GLGT YVPS L SLKEA+L+
Sbjct: 191 PDVGFSYIAAHSPGGGSVGAYLGLTGKRISAPSDALFVGLGTHYVPSEKLASLKEAILSA 250
Query: 168 TFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAET 227
SEDP+QDI A L+KYSS+PE EA LK LLP I S FSS KS+++ IEELKK+Q S E+
Sbjct: 251 NLSEDPNQDIQATLSKYSSNPESEAHLKSLLPHIESAFSSNKSIKETIEELKKYQQSTES 310
Query: 228 SVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSS 287
SV +WA+EAL+G+ KGAPFSL LTQKYFS VA A K +NEL+ L+GVMK EYR+ALRS+
Sbjct: 311 SVVEWANEALKGLEKGAPFSLYLTQKYFSNVACAKSKPENELATLNGVMKTEYRIALRSA 370
Query: 288 LRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGTGVEELKV 338
LR DFAEGVRAVL+DKDQNPKWNP S+EEV+++EVEALF+PL VEELKV
Sbjct: 371 LRGDFAEGVRAVLIDKDQNPKWNPTSIEEVDENEVEALFKPLSPEVEELKV 421
>sp|Q9LK08|HIBC7_ARATH 3-hydroxyisobutyryl-CoA hydrolase-like protein 4, mitochondrial
OS=Arabidopsis thaliana GN=At3g24360 PE=2 SV=1
Length = 418
Score = 444 bits (1143), Expect = e-124, Method: Compositional matrix adjust.
Identities = 211/291 (72%), Positives = 248/291 (85%)
Query: 48 EVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLF 107
+VFTAEYSLICKI+ Y+KPYISLMDG+TMGFG+G+SGHGRYR++TE+T+LAMPENGIGLF
Sbjct: 128 KVFTAEYSLICKIAGYRKPYISLMDGITMGFGLGLSGHGRYRVITERTVLAMPENGIGLF 187
Query: 108 PDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAV 167
PDVGFSYIAA PG GSVGAYLGMTG+RISTPSDALF GLGT YVPSG LGSL+EA+L+
Sbjct: 188 PDVGFSYIAAHSPGEGSVGAYLGMTGRRISTPSDALFVGLGTHYVPSGKLGSLREAILSA 247
Query: 168 TFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAET 227
S+DP Q I A L+ YSSDPE E+ L++LLPQI S FS KSV++ IEELKK Q S+E
Sbjct: 248 DLSKDPQQHIQATLSNYSSDPETESHLQMLLPQIESAFSVSKSVKETIEELKKFQQSSEA 307
Query: 228 SVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSS 287
SVA+WA+EA+QG+ KGAPFSL LT KYFSKVA A GKT+N ++ L+GVM EYR+ALRS+
Sbjct: 308 SVAEWANEAVQGIEKGAPFSLYLTHKYFSKVACAKGKTNNAMATLNGVMITEYRIALRSA 367
Query: 288 LRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGTGVEELKV 338
LRSDF EGVRAVL DKDQNPKW PASL+EV+++EV+ALF PL EEL V
Sbjct: 368 LRSDFTEGVRAVLTDKDQNPKWKPASLDEVDETEVDALFMPLSPEFEELNV 418
>sp|Q5ZJ60|HIBCH_CHICK 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Gallus gallus
GN=HIBCH PE=2 SV=1
Length = 385
Score = 179 bits (453), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 113/288 (39%), Positives = 161/288 (55%), Gaps = 26/288 (9%)
Query: 48 EVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLF 107
+ F EY L I KKPY++L+DG+TMG G+G+S HG +R+ TEKT+ AMPE IGLF
Sbjct: 115 DYFREEYRLDNAIGTCKKPYVALIDGITMGGGVGLSVHGHFRVATEKTVFAMPETAIGLF 174
Query: 108 PDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAV 167
PDVG Y + G +G L +TG R+ D L AG+ T +V SG L L++ L+A+
Sbjct: 175 PDVGGGYFLPR--LSGKIGHLLALTGFRLKG-RDVLKAGIATHFVESGKLPELEKDLIAL 231
Query: 168 TFSEDPHQDIVALLAKYSS----DPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQS 223
++I LL Y D E E L + +I S FS+ S+ +I+++LK+ S
Sbjct: 232 --KSPSKENIADLLNSYHMQTKIDQEKEFVLDEHMERINSIFSAN-SMEEIVQKLKQDGS 288
Query: 224 SAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVA 283
+A + L+ + K +P SL LT + + A+ L V EYR++
Sbjct: 289 P-------FATKQLEAINKMSPTSLKLTLRQLREGATM---------SLQDVFTMEYRLS 332
Query: 284 LRSSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGT 331
DF EGVRAVL+DKDQ+P+W PA+LEEV+ V+ F+PLG
Sbjct: 333 QACMRGHDFYEGVRAVLIDKDQSPRWKPAALEEVSDEFVDNCFKPLGN 380
>sp|Q8QZS1|HIBCH_MOUSE 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Mus musculus
GN=Hibch PE=1 SV=1
Length = 385
Score = 174 bits (440), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/288 (36%), Positives = 164/288 (56%), Gaps = 26/288 (9%)
Query: 48 EVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLF 107
++F EY L I+ +KPY++L+DG+TMG G+G+S HG++R+ TE++L AMPE GIGLF
Sbjct: 115 DLFREEYILNNAIASCQKPYVALIDGITMGGGVGLSVHGQFRVATERSLFAMPETGIGLF 174
Query: 108 PDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAV 167
PDVG Y + G +G +L +TG R+ D AG+ T +V S L L+E LLA+
Sbjct: 175 PDVGGGYFLPRLQ--GKLGYFLALTGYRLKG-RDVHRAGIATHFVDSEKLRVLEEELLAL 231
Query: 168 TFSEDPHQDIVALLAKYSSDPEGEAPLKLL----LPQITSCFSSEKSVRQIIEELKKHQS 223
+D+ +L Y + + + ++ + +I SCFS+ +V QIIE L++ S
Sbjct: 232 --KSPSAEDVAGVLESYHAKSKMDQDKSIIFEEHMDKINSCFSA-NTVEQIIENLRQDGS 288
Query: 224 SAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVA 283
+A E ++ + K +P SL +T + + +S L V+ EYR+
Sbjct: 289 P-------FAIEQMKVINKMSPTSLKITLRQLMEGSS---------KTLQEVLIMEYRIT 332
Query: 284 LRSSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGT 331
DF EGVRAVL+DKDQ PKW PA+L++V ++ + F+ LG+
Sbjct: 333 QACMEGHDFHEGVRAVLIDKDQTPKWKPANLKDVTDEDLNSYFKSLGS 380
>sp|Q6NVY1|HIBCH_HUMAN 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Homo sapiens
GN=HIBCH PE=1 SV=2
Length = 386
Score = 171 bits (433), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 108/286 (37%), Positives = 161/286 (56%), Gaps = 26/286 (9%)
Query: 50 FTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPD 109
F EY L + +KPY++L+ G+TMG G+G+S HG++R+ TEK L AMPE IGLFPD
Sbjct: 118 FREEYMLNNAVGSCQKPYVALIHGITMGGGVGLSVHGQFRVATEKCLFAMPETAIGLFPD 177
Query: 110 VGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTF 169
VG Y + G +G +L +TG R+ D AG+ T +V S L L+E LLA+
Sbjct: 178 VGGGYFLPRLQ--GKLGYFLALTGFRLKG-RDVYRAGIATHFVDSEKLAMLEEDLLAL-- 232
Query: 170 SEDPHQDIVALLAKYSS----DPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSA 225
++I ++L Y + D + L+ + +I SCFS+ +V +IIE L++ SS
Sbjct: 233 KSPSKENIASVLENYHTESKIDRDKSFILEEHMDKINSCFSA-NTVEEIIENLQQDGSS- 290
Query: 226 ETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALR 285
+A E L+ + K +P SL +T + + +S L V+ EYR++
Sbjct: 291 ------FALEQLKVINKMSPTSLKITLRQLMEGSS---------KTLQEVLTMEYRLSQA 335
Query: 286 SSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGT 331
DF EGVRAVL+DKDQ+PKW PA L+EV + ++ F+ LG+
Sbjct: 336 CMRGHDFHEGVRAVLIDKDQSPKWKPADLKEVTEEDLNNHFKSLGS 381
>sp|Q5XIE6|HIBCH_RAT 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Rattus
norvegicus GN=Hibch PE=1 SV=2
Length = 385
Score = 169 bits (429), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/288 (36%), Positives = 162/288 (56%), Gaps = 26/288 (9%)
Query: 48 EVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLF 107
++F EY L I+ +KPY++L+DG+TMG G+G+S HG++R+ TE++L AMPE GIGLF
Sbjct: 115 DLFREEYILNNAIASCQKPYVALIDGITMGGGVGLSVHGQFRVATERSLFAMPETGIGLF 174
Query: 108 PDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAV 167
PDVG Y + G +G +L +TG R+ D AG+ T +V S L L+E LLA+
Sbjct: 175 PDVGGGYFLPRLQ--GKLGYFLALTGFRLKG-RDVHRAGIATHFVDSEKLHVLEEELLAL 231
Query: 168 TFSEDPHQDIVALLAKYSSDPEGEAPLKLL----LPQITSCFSSEKSVRQIIEELKKHQS 223
+D+ +L Y + + ++ + +I SCFS+ +V QI+E L++ S
Sbjct: 232 --KSPSAEDVAGVLESYHAKSKMGQDKSIIFEEHMDKINSCFSA-NTVEQILENLRQDGS 288
Query: 224 SAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVA 283
+A E ++ + K +P SL +T ++ KT L V+ EYR+
Sbjct: 289 P-------FAMEQIKVINKMSPTSLKIT---LRQLMEGSTKT------LQEVLTMEYRLT 332
Query: 284 LRSSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGT 331
DF EGVRAVL+DKDQ PKW PA L++V ++ + F+ LG+
Sbjct: 333 QACMEGHDFHEGVRAVLIDKDQTPKWKPADLKDVTDEDLNSYFKSLGS 380
>sp|Q28FR6|HIBCH_XENTR 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Xenopus
tropicalis GN=hibch PE=2 SV=1
Length = 385
Score = 167 bits (422), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 115/289 (39%), Positives = 160/289 (55%), Gaps = 28/289 (9%)
Query: 48 EVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLF 107
+ F EY L I YKKPY++L+DG+TMG G+G+S HG +R+ +E TL AMPE IGLF
Sbjct: 115 DFFREEYILNNAIGTYKKPYVALIDGITMGGGVGLSVHGHFRVASENTLFAMPETAIGLF 174
Query: 108 PDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAV 167
PDVG Y + P G +G YL +TG R+ SD AG+ T +V S + SL++ L+A+
Sbjct: 175 PDVGGGYFLPRLP--GKLGLYLALTGFRLKG-SDVQKAGIATHFVESEKIPSLEQDLVAM 231
Query: 168 TFSEDPHQDIVA-LLAKY--SSDPEGEAPLKLL--LPQITSCFSSEKSVRQIIEELKKHQ 222
+ P ++ VA +L Y S + P L L +I S FS+ SV IIE L+
Sbjct: 232 ---KCPSKENVADVLDSYHNKSYAAQDKPFVLAEHLDKINSLFSAS-SVEAIIENLRCDG 287
Query: 223 SSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRV 282
SS +A + LQ + +P SL +T + + +S L V+ EYR+
Sbjct: 288 SS-------FALKQLQTLSTMSPTSLKITFRQLKEGSSM---------SLQEVLTMEYRL 331
Query: 283 ALRSSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGT 331
+ DF EGVRAVL+DK+QN KWNP LEEV +++ F LG
Sbjct: 332 SQACMKGYDFYEGVRAVLIDKNQNAKWNPELLEEVTDDYIDSYFTSLGN 380
>sp|Q9LKJ1|HIBC1_ARATH 3-hydroxyisobutyryl-CoA hydrolase 1 OS=Arabidopsis thaliana GN=CHY1
PE=1 SV=1
Length = 378
Score = 166 bits (421), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/282 (36%), Positives = 151/282 (53%), Gaps = 22/282 (7%)
Query: 50 FTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPD 109
F++EY L ++ Y K +S+++G+ MG G G+S HGR+RI TE T+ AMPE +GLFPD
Sbjct: 91 FSSEYMLNYVMATYSKAQVSILNGIVMGGGAGVSVHGRFRIATENTVFAMPETALGLFPD 150
Query: 110 VGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTF 169
VG SY ++ P G G Y+G+TG R+ ++ L GL T +VPS L +L EA L
Sbjct: 151 VGASYFLSRLP--GFFGEYVGLTGARLDG-AEMLACGLATHFVPSTRLTAL-EADLCRIN 206
Query: 170 SEDPHQDIVALLAKYSSDPE-GEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETS 228
S DP +L Y+ P + L I CF S ++V +II L++ A
Sbjct: 207 SNDP-TFASTILDAYTQHPRLKQQSAYRRLDVIDRCF-SRRTVEEIISALERE---ATQE 261
Query: 229 VAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRV---ALR 285
W +Q + KG+P SL ++ + + L + + EYR+ ++
Sbjct: 262 ADGWISATIQALKKGSPASLKISLRSIR---------EGRLQGVGQCLIREYRMVCHVMK 312
Query: 286 SSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFE 327
+ DF EG RA+LVDKD+NPKW P LE++ S VE FE
Sbjct: 313 GEISKDFVEGCRAILVDKDKNPKWEPRRLEDMKDSMVEQYFE 354
>sp|A2VDC2|HIBCH_XENLA 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Xenopus laevis
GN=hibch PE=2 SV=1
Length = 385
Score = 164 bits (415), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 160/289 (55%), Gaps = 28/289 (9%)
Query: 48 EVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLF 107
+ F EY L I KKPY++++DG+TMG G+G+S HG +R+ +EKTL AMPE IGLF
Sbjct: 115 DFFREEYILNNAIGTCKKPYVAVIDGITMGGGVGLSVHGHFRVASEKTLFAMPETAIGLF 174
Query: 108 PDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAV 167
PDVG Y + G +G YL +TG R+ SD AG+ T +V S L SL++ L+A+
Sbjct: 175 PDVGGGYFLPRLT--GKLGLYLALTGFRLK-GSDVQKAGIATHFVESEKLSSLEQDLVAM 231
Query: 168 TFSEDPHQDIVA-LLAKYS--SDPEGEAPLKLL--LPQITSCFSSEKSVRQIIEELKKHQ 222
+ P ++ VA +L Y S + P L + +I S FS +V +I+E LK
Sbjct: 232 ---KSPSKENVADVLDSYQKKSYAAQDKPFVLAENMDKINSLFSGN-TVEEIMENLKCDG 287
Query: 223 SSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRV 282
SS +A + LQ + +P SL +T + + AS L V+ EYR+
Sbjct: 288 SS-------FAMKQLQTLSTMSPTSLKITFRQLKEGASM---------SLQEVLTMEYRL 331
Query: 283 ALRSSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGT 331
+ DF EGVRAVL+DKDQ KW P SLEEV + +++ F LG+
Sbjct: 332 SQACMNGHDFYEGVRAVLIDKDQKAKWKPESLEEVTEDYIDSCFTSLGS 380
>sp|Q6NMB0|HIBC3_ARATH Probable 3-hydroxyisobutyryl-CoA hydrolase 3 OS=Arabidopsis
thaliana GN=At2g30660 PE=2 SV=1
Length = 378
Score = 162 bits (409), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 98/296 (33%), Positives = 158/296 (53%), Gaps = 22/296 (7%)
Query: 35 LQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEK 94
+Q+ Q + + F +Y+L ++ Y KP +S+++G+ MG G G+S HGR+RI TE
Sbjct: 72 VQNMVQGKWRLGADFFRDQYTLNYVMATYSKPQVSILNGIVMGAGAGVSIHGRFRIATEN 131
Query: 95 TLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPS 154
T+ AMPE +GLFPDVG SY ++ P G G Y+G+TG R+ ++ L GL T +VPS
Sbjct: 132 TVFAMPETSLGLFPDVGASYFLSRLP--GFFGEYVGLTGARLDG-AELLACGLATHFVPS 188
Query: 155 GNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPE-GEAPLKLLLPQITSCFSSEKSVRQ 213
L +L+ L V S DP + +L Y+ P + L I CF S++++ +
Sbjct: 189 TRLTALETDLCKVG-SSDP-SFVSTILDAYTQHPHLKQKSAYHRLDVIDRCF-SKRTMEE 245
Query: 214 IIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLS 273
II L++ + + W+ ++ + K +P SL ++ + + L +
Sbjct: 246 IISALERETTQ---ELDDWSLTTIRALKKSSPSSLKISLRSIR---------EGRLQGVG 293
Query: 274 GVMKYEYRV---ALRSSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALF 326
+ EYR+ ++ L D EG RA+L+DKD+NPKW P LE++ S V+ F
Sbjct: 294 HCLTREYRMVCHVMKGDLSKDLVEGCRAILIDKDRNPKWEPRRLEDMKDSMVDQFF 349
>sp|Q58EB4|HIBCH_DANRE 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Danio rerio
GN=hibch PE=2 SV=1
Length = 382
Score = 159 bits (401), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 108/292 (36%), Positives = 154/292 (52%), Gaps = 26/292 (8%)
Query: 41 NQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMP 100
N LS++ F EY L I Y+KPY++L++G+TMG G+G+S HG++R+ TEKTL AMP
Sbjct: 107 NLLSQVF--FREEYILNNTIGTYQKPYVALINGITMGGGVGLSVHGQFRVATEKTLFAMP 164
Query: 101 ENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSL 160
E GIGLFPDVG Y + G +G +L +TG R+ D G+ T +V S + SL
Sbjct: 165 ETGIGLFPDVGGGYFLPRLQ--GKLGLFLALTGFRLKG-RDVQRVGVATHFVQSEKIESL 221
Query: 161 KEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFS---SEKSVRQIIEE 217
++ L V D+ LL Y +A +L + T S SV +I+E
Sbjct: 222 EKDL--VDLKSPSISDVAQLLDSYQEQSHLDAEKPFVLQEQTEAIDRLFSAGSVEEIVEN 279
Query: 218 LKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMK 277
LKK S+ +A + + + K +P SL LT + + A L V
Sbjct: 280 LKKDGSA-------FALKQAETLAKMSPTSLKLTFRQIEEGARM---------SLQEVFM 323
Query: 278 YEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPL 329
EYR++ DF EGVRAVL+DKDQ+PKW P++L V++ V+ F L
Sbjct: 324 MEYRLSQACMNGHDFYEGVRAVLIDKDQSPKWKPSTLAGVSEQFVDKCFSSL 375
>sp|Q1PEY5|HIBC2_ARATH Probable 3-hydroxyisobutyryl-CoA hydrolase 2 OS=Arabidopsis
thaliana GN=At2g30650 PE=2 SV=1
Length = 378
Score = 159 bits (401), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 104/309 (33%), Positives = 160/309 (51%), Gaps = 24/309 (7%)
Query: 35 LQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEK 94
++ Q +L F Y+L +S Y+KP +S+++G+ MG G G+S +GR+RI TE
Sbjct: 72 VRDILQGKLIRGAHYFKVGYTLNYVLSTYRKPQVSILNGIVMGGGAGLSTNGRFRIATEN 131
Query: 95 TLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPS 154
T+ AMPE +GLFPDVG SY ++ P G G Y+G+TG R+ ++ L GL T +VPS
Sbjct: 132 TVFAMPETALGLFPDVGASYFLSRLP--GFFGEYVGLTGARLDG-AEMLACGLATHFVPS 188
Query: 155 GNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPE-GEAPLKLLLPQITSCFSSEKSVRQ 213
+L +L+ L V S I +L Y+ P + L I CF S+++V +
Sbjct: 189 ISLTALEAELYKVGSSNQTF--ISTILDAYAEYPHLNQHSSYHRLDVIDRCF-SKRTVEE 245
Query: 214 IIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLS 273
I L++ + W +Q + K +P L ++ + + L +
Sbjct: 246 IFSALEREVTQKPND---WLLATIQALEKASPSCLKISLRSIR---------EGRLQGVG 293
Query: 274 GVMKYEYRV---ALRSSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLG 330
+ EYR+ ++ + DF EG RAVL+DKD+NPKW P LE+V S V+ FE +
Sbjct: 294 QCLIREYRMVCHVMKGDISKDFVEGCRAVLIDKDRNPKWQPRRLEDVTDSMVDQYFERVE 353
Query: 331 T--GVEELK 337
G E+LK
Sbjct: 354 DEEGWEDLK 362
>sp|Q2HJ73|HIBCH_BOVIN 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Bos taurus
GN=HIBCH PE=2 SV=1
Length = 386
Score = 149 bits (377), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/306 (36%), Positives = 171/306 (55%), Gaps = 31/306 (10%)
Query: 32 LNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIV 91
L+ ++T Q L ++ F EY L I +KPYI+L+ G+TMG G+G+S HG++R+
Sbjct: 103 LSEARNTNQKMLQDL---FREEYILNNAIDSCQKPYIALIHGITMGGGVGVSVHGQFRVA 159
Query: 92 TEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDY 151
TEK++ AMPE IGLFPDVG Y + G +G +L +TG R+ D AG+ T +
Sbjct: 160 TEKSVFAMPETAIGLFPDVGGGYFLPRLQ--GKLGYFLALTGFRLKG-RDVYTAGIATHF 216
Query: 152 VPSGNLGSLKEALLAVTFSEDPHQDIVALL-----AKYSSDPEGEAPLKLLLPQITSCFS 206
V LG L+E LLA+ + P ++ +A + AK +D + L+ + +I S FS
Sbjct: 217 VDFEKLGMLEEDLLAL---KSPSKENIADVLETYHAKSKTDQDKPFILEEHMDKINSWFS 273
Query: 207 SEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTD 266
+ +V QI++ L++ SS +A E L+ + K +P SL +T ++ KT
Sbjct: 274 AN-TVEQIVDNLQQDGSS-------FALEQLKVIKKMSPTSLKIT---LRQLMEGSSKT- 321
Query: 267 NELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALF 326
L V+ EYR++ DF EGVRAVL+DKDQ+PKW PA L+EV ++ F
Sbjct: 322 -----LPEVLIMEYRLSQACMKGHDFHEGVRAVLIDKDQSPKWKPADLKEVTDEDLNDYF 376
Query: 327 EPLGTG 332
+ LG+
Sbjct: 377 KSLGSN 382
>sp|Q55GS6|HIBCH_DICDI 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Dictyostelium
discoideum GN=hibch PE=3 SV=1
Length = 381
Score = 146 bits (369), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/305 (32%), Positives = 162/305 (53%), Gaps = 25/305 (8%)
Query: 32 LNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIV 91
LN Q + N + ++ F EY L I +S+ +G MG GIG+S HG++R+
Sbjct: 97 LNEEQKSKTNDIGDLF--FREEYILNNLIGTNPIAQVSIYNGFAMGGGIGLSVHGKFRVA 154
Query: 92 TEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDY 151
TE T+ AMPE GIG F DVG SY + P + G YL +TG ++ ++ AG+ T +
Sbjct: 155 TENTVFAMPETGIGFFCDVGGSYFLPRLP--NNYGMYLALTGSKLKG-NNVYLAGVATHF 211
Query: 152 VPSGNLGSLKEALLAVTFSEDP-HQDIVALLAKYSSDPEGEA-PLKLLLPQITSCFSSEK 209
V + ++ +L++ + E+P Q I ++L KY + + L I F +
Sbjct: 212 VSNEHIQALEK---EIEECENPTSQTINSILTKYHDKSKSTSNEYNDNLGDIERIF-GKN 267
Query: 210 SVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNEL 269
SV++I E+L+ ++S +WA + L+ + +P SL V K +L
Sbjct: 268 SVKEIFEQLELLENS------EWAKQTLKTLKSVSPSSLM--------VVFEQMKQGAKL 313
Query: 270 SKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPL 329
L+ ++ E+R++ + DF EGVRA+LVDKD+NPKW P S+++++Q+ V + F+PL
Sbjct: 314 PSLAKCLEMEFRISQHFLEKPDFFEGVRALLVDKDKNPKWLPPSIDQIDQTLVNSYFKPL 373
Query: 330 GTGVE 334
E
Sbjct: 374 SNNKE 378
>sp|Q9SHJ8|HIBC8_ARATH 3-hydroxyisobutyryl-CoA hydrolase-like protein 5 OS=Arabidopsis
thaliana GN=At1g06550 PE=2 SV=2
Length = 387
Score = 140 bits (354), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 152/297 (51%), Gaps = 46/297 (15%)
Query: 47 IEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGL 106
+EV Y L I YKK +SL++G++MG G + ++ +VTEKT+ A PE G
Sbjct: 88 LEVVYRMYWLCYHIHTYKKTQVSLVNGISMGGGAALMVPMKFSVVTEKTVFATPEASFGF 147
Query: 107 FPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLA 166
D GFSYI ++ P G +G +L +TG R++ + + G+ T +VPSG L L+ L++
Sbjct: 148 HTDCGFSYIHSRLP--GHLGEFLALTGARLNG-KELVAIGMATHFVPSGKLMDLEARLVS 204
Query: 167 VT-------------FSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQ 213
+ FSE + D ++L K S I CFS E SV+Q
Sbjct: 205 LDSGDADVVQSTIEEFSEKVNLDKDSILNKQSV--------------INECFSKE-SVKQ 249
Query: 214 IIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLS 273
II+ ++ A +W ++G+ + +P L + + +T LS
Sbjct: 250 IIQAF---EAEASKDGNEWITPVIKGLKRSSPTGLKIV---LQSIREGRKQT------LS 297
Query: 274 GVMKYEYRVA---LRSSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFE 327
+K E+R+ LR ++ D EG+RA+ +DKD +PKWNPA+L+EV+ ++ ++F+
Sbjct: 298 DCLKKEFRLTLNILRKTISPDMYEGIRALTIDKDNSPKWNPATLDEVDDEKINSVFK 354
>sp|Q8RXN4|HIBC5_ARATH 3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial
OS=Arabidopsis thaliana GN=At4g31810 PE=2 SV=1
Length = 409
Score = 134 bits (338), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 150/304 (49%), Gaps = 20/304 (6%)
Query: 28 GQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGR 87
G L+ S + E F Y + Y KP I++MDGVTMG G GIS G
Sbjct: 101 GADVLSLYHSINEGNTEESKLFFENLYKFVYLQGTYLKPNIAIMDGVTMGCGGGISLPGM 160
Query: 88 YRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGL 147
+R+ T+KT+LA PE IG PD G SY ++ P G +G YL +TG++++ + + GL
Sbjct: 161 FRVATDKTVLAHPEVQIGFHPDAGASYYLSRLP--GYLGEYLALTGQKLNG-VEMIACGL 217
Query: 148 GTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSS 207
T Y + L L E + ++DP I LA+Y ++ L ++ +
Sbjct: 218 ATHYCLNARL-PLIEERIGKLLTDDPAV-IEDSLAQYGDLVYPDSSSVLHKIELIDKYFG 275
Query: 208 EKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDN 267
+V +IIE + ++ A S +W + L+ + + +P SL +T + +
Sbjct: 276 LDTVEEIIEAM---ENEAANSCNEWCKKTLKQIKEASPLSLKITLQSIR---------EG 323
Query: 268 ELSKLSGVMKYEYRVAL---RSSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEA 324
L + +EYR+++ + DF EG+RA LVDKD PKW+P LE+V++ V+
Sbjct: 324 RFQTLDQCLTHEYRISICGVSKVVSGDFCEGIRARLVDKDFAPKWDPPRLEDVSKDMVDC 383
Query: 325 LFEP 328
F P
Sbjct: 384 YFTP 387
>sp|O74802|HIBCH_SCHPO 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=ehd3 PE=3 SV=1
Length = 429
Score = 127 bits (318), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 145/288 (50%), Gaps = 20/288 (6%)
Query: 42 QLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPE 101
+L E+ F EY L ++ Y+KP ++LM+G+TMG G G++ H +RI E T+ AMPE
Sbjct: 130 KLPEVRHAFAQEYRLSHTLATYQKPVVALMNGITMGGGSGLAMHVPFRIACEDTMFAMPE 189
Query: 102 NGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLK 161
GIG F DV S+ ++ P G G YLG+T + I D L G+ T +VP L+
Sbjct: 190 TGIGYFTDVAASFFFSRLP--GYFGTYLGLTSQ-IVKGYDCLRTGIATHFVPKHMFPHLE 246
Query: 162 EALLAVTFSE--DPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELK 219
+ L + S+ + I+ SS P P ++ I CF +V II LK
Sbjct: 247 DRLAELNTSDISKINNTILEFAEFASSSPPTFTP--DVMDVINKCFCKNDTV-DIIRALK 303
Query: 220 KHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYE 279
++ S+ +++A++A ++ + +P S+ +T + A +S Y+
Sbjct: 304 EYASNT-SALAEFAKSTVKTLYSKSPTSIAVTNRLIKSAAKW---------SISEAFYYD 353
Query: 280 YRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFE 327
+ V+ + DF EGV A L+ K +NPKW+ + E + ++E F+
Sbjct: 354 HIVSYYMLKQPDFVEGVNAQLITKTKNPKWSKS--HEYHFKDLENYFK 399
>sp|Q5XF59|HIBC4_ARATH 3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial
OS=Arabidopsis thaliana GN=At3g60510 PE=2 SV=1
Length = 401
Score = 119 bits (298), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 164/300 (54%), Gaps = 26/300 (8%)
Query: 32 LNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIV 91
L HL++ + + E F++ YS I + Y KP++++++GVTMG G G+S G +R+
Sbjct: 103 LYHLRT--RGSPDAIREFFSSLYSFIYLLGTYLKPHVAILNGVTMGGGTGVSIPGTFRVA 160
Query: 92 TEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDY 151
T++T+ A PE IG PD G S+ + P G +G YLG+TG ++S ++ L GL T Y
Sbjct: 161 TDRTIFATPETIIGFHPDAGASFNLSHLP--GRLGEYLGLTGLKLSG-AEMLACGLATHY 217
Query: 152 VPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYS--SDPEGEAPLKLLLPQITSCFSSEK 209
+ S + ++E L + ++DP + + L K + + PE ++ + + CFS +
Sbjct: 218 IRSEEVPVMEEQLKKL-LTDDPSV-VESCLEKCAEVAHPEKTGVIR-RIDLLEKCFSHD- 273
Query: 210 SVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNEL 269
+V +II+ L+ S + + W L+ + + +P SL KVA + L
Sbjct: 274 TVEEIIDSLEIEASRRKDT---WCITTLRRLKESSPLSL--------KVA-LRSIREGRL 321
Query: 270 SKLSGVMKYEYRVALR---SSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALF 326
L + EYR++L+ + +F EGVRA L+DKD+ PKW+P SLE+V++ V+ F
Sbjct: 322 QTLDQCLIREYRMSLQGLIGPMSGNFCEGVRARLIDKDEAPKWDPPSLEKVSEDMVDDYF 381
>sp|P28817|HIBCH_YEAST 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=EHD3 PE=1
SV=2
Length = 500
Score = 115 bits (287), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 139/287 (48%), Gaps = 34/287 (11%)
Query: 42 QLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPE 101
+ ++ I+ FT EYSL +I+ Y KP ++ MDG+TMG G+G+S H +RI TE T AMPE
Sbjct: 113 EFAKSIKFFTDEYSLNFQIATYLKPIVTFMDGITMGGGVGLSIHTPFRIATENTKWAMPE 172
Query: 102 NGIGLFPDVGFSY----IAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNL 157
IG FPDVG ++ I + YL +TG+ + T +DA GL + YV S NL
Sbjct: 173 MDIGFFPDVGSTFALPRIVTLANSNSQMALYLCLTGE-VVTGADAYMLGLASHYVSSENL 231
Query: 158 GSLKEAL--LAVTFSEDPHQDIVALLAKYSSDPEGEAPL---------KLLLPQITSCFS 206
+L++ L ++ F+ DP + S D E +PL L I +CF+
Sbjct: 232 DALQKRLGEISPPFNNDPQSAYFFGMVNESID-EFVSPLPKDYVFKYSNEKLNVIEACFN 290
Query: 207 SEK--SVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGK 264
K ++ I+ L++++ SAE +A E + +P SL + + + + H
Sbjct: 291 LSKNGTIEDIMNNLRQYEGSAEGKA--FAQEIKTKLLTKSPSSLQIALRLVQENSRDH-- 346
Query: 265 TDNELSKLSGVMKYEYRVALRSSLRSD----FAEGVRAVLVDKDQNP 307
+ +K + A + D F+E + L+DK + P
Sbjct: 347 -------IESAIKRDLYTAANMCMNQDSLVEFSEATKHKLIDKQRVP 386
>sp|A4YI89|HPCD_METS5 3-hydroxypropionyl-coenzyme A dehydratase OS=Metallosphaera sedula
(strain ATCC 51363 / DSM 5348) GN=Msed_2001 PE=1 SV=1
Length = 259
Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
Query: 56 LICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYI 115
++ KI KP I++++G +G G+ ++ RI E+ L +PE +G++P G +
Sbjct: 88 IMDKIEALSKPTIAMINGYALGGGLELALACDIRIAAEEAQLGLPEINLGIYPGYGGTQR 147
Query: 116 AAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNL 157
+ G G + MTG RI DA GL VP NL
Sbjct: 148 LTRVIGKGRALEMM-MTGDRIPG-KDAEKYGLVNRVVPLANL 187
>sp|A4TM82|FADJ_YERPP Fatty acid oxidation complex subunit alpha OS=Yersinia pestis
(strain Pestoides F) GN=fadJ PE=3 SV=1
Length = 774
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 8/103 (7%)
Query: 55 SLICKISEYKKPYISLMDGVTMGFGI--GISGHGRYRIVTEKTLLAMPENGIGLFPDVGF 112
S++ +I+ + P ++ + G +G G+ ++ H R + +KT+L +PE +GL P G
Sbjct: 126 SILAQIAAFPVPVVAAIHGACLGGGLELALACHSRICSLDDKTVLGLPEVQLGLLPGSGG 185
Query: 113 SYIAAKGPGGGSVGAYLGM--TGKRISTPSDALFAGLGTDYVP 153
+ + P V L M TGK+I P AL GL D VP
Sbjct: 186 TQ---RLPRLVGVSKALDMILTGKQIR-PRQALKMGLVDDVVP 224
>sp|Q668V1|FADJ_YERPS Fatty acid oxidation complex subunit alpha OS=Yersinia
pseudotuberculosis serotype I (strain IP32953) GN=fadJ
PE=3 SV=2
Length = 753
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 8/103 (7%)
Query: 55 SLICKISEYKKPYISLMDGVTMGFGI--GISGHGRYRIVTEKTLLAMPENGIGLFPDVGF 112
S++ +I+ + P ++ + G +G G+ ++ H R + +KT+L +PE +GL P G
Sbjct: 99 SILAQIAAFPVPVVAAIHGACLGGGLELALACHSRICSLDDKTVLGLPEVQLGLLPGSGG 158
Query: 113 SYIAAKGPGGGSVGAYLGM--TGKRISTPSDALFAGLGTDYVP 153
+ + P V L M TGK+I P AL GL D VP
Sbjct: 159 TQ---RLPRLVGVSKALDMILTGKQIR-PRQALKMGLVDDVVP 197
>sp|Q1CHK2|FADJ_YERPN Fatty acid oxidation complex subunit alpha OS=Yersinia pestis bv.
Antiqua (strain Nepal516) GN=fadJ PE=3 SV=2
Length = 747
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 8/103 (7%)
Query: 55 SLICKISEYKKPYISLMDGVTMGFGI--GISGHGRYRIVTEKTLLAMPENGIGLFPDVGF 112
S++ +I+ + P ++ + G +G G+ ++ H R + +KT+L +PE +GL P G
Sbjct: 99 SILAQIAAFPVPVVAAIHGACLGGGLELALACHSRICSLDDKTVLGLPEVQLGLLPGSGG 158
Query: 113 SYIAAKGPGGGSVGAYLGM--TGKRISTPSDALFAGLGTDYVP 153
+ + P V L M TGK+I P AL GL D VP
Sbjct: 159 TQ---RLPRLVGVSKALDMILTGKQIR-PRQALKMGLVDDVVP 197
>sp|Q8ZD45|FADJ_YERPE Fatty acid oxidation complex subunit alpha OS=Yersinia pestis
GN=fadJ PE=3 SV=2
Length = 747
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 8/103 (7%)
Query: 55 SLICKISEYKKPYISLMDGVTMGFGI--GISGHGRYRIVTEKTLLAMPENGIGLFPDVGF 112
S++ +I+ + P ++ + G +G G+ ++ H R + +KT+L +PE +GL P G
Sbjct: 99 SILAQIAAFPVPVVAAIHGACLGGGLELALACHSRICSLDDKTVLGLPEVQLGLLPGSGG 158
Query: 113 SYIAAKGPGGGSVGAYLGM--TGKRISTPSDALFAGLGTDYVP 153
+ + P V L M TGK+I P AL GL D VP
Sbjct: 159 TQ---RLPRLVGVSKALDMILTGKQIR-PRQALKMGLVDDVVP 197
>sp|Q1C660|FADJ_YERPA Fatty acid oxidation complex subunit alpha OS=Yersinia pestis bv.
Antiqua (strain Antiqua) GN=fadJ PE=3 SV=2
Length = 747
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 8/103 (7%)
Query: 55 SLICKISEYKKPYISLMDGVTMGFGI--GISGHGRYRIVTEKTLLAMPENGIGLFPDVGF 112
S++ +I+ + P ++ + G +G G+ ++ H R + +KT+L +PE +GL P G
Sbjct: 99 SILAQIAAFPVPVVAAIHGACLGGGLELALACHSRICSLDDKTVLGLPEVQLGLLPGSGG 158
Query: 113 SYIAAKGPGGGSVGAYLGM--TGKRISTPSDALFAGLGTDYVP 153
+ + P V L M TGK+I P AL GL D VP
Sbjct: 159 TQ---RLPRLVGVSKALDMILTGKQIR-PRQALKMGLVDDVVP 197
>sp|A7FGK1|FADJ_YERP3 Fatty acid oxidation complex subunit alpha OS=Yersinia
pseudotuberculosis serotype O:1b (strain IP 31758)
GN=fadJ PE=3 SV=1
Length = 747
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 8/103 (7%)
Query: 55 SLICKISEYKKPYISLMDGVTMGFGI--GISGHGRYRIVTEKTLLAMPENGIGLFPDVGF 112
S++ +I+ + P ++ + G +G G+ ++ H R + +KT+L +PE +GL P G
Sbjct: 99 SILAQIAAFPVPVVAAIHGACLGGGLELALACHSRICSLDDKTVLGLPEVQLGLLPGSGG 158
Query: 113 SYIAAKGPGGGSVGAYLGM--TGKRISTPSDALFAGLGTDYVP 153
+ + P V L M TGK+I P AL GL D VP
Sbjct: 159 TQ---RLPRLVGVSKALDMILTGKQIR-PRQALKMGLVDDVVP 197
>sp|A8GH86|FADJ_SERP5 Fatty acid oxidation complex subunit alpha OS=Serratia
proteamaculans (strain 568) GN=fadJ PE=3 SV=2
Length = 715
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 4/105 (3%)
Query: 55 SLICKISEYKKPYISLMDGVTMGFGI--GISGHGRYRIVTEKTLLAMPENGIGLFPDVGF 112
S + +I+ ++ P ++ + G +G G+ ++ HGR + +KT L +PE +GL P G
Sbjct: 96 STLAQIAAFQVPVVAAIHGACLGGGLELALACHGRVCSLDDKTALGLPEVQLGLLPGSGG 155
Query: 113 SYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNL 157
+ + G S + +TGK I AL GL D VP L
Sbjct: 156 TQRLPRLI-GASKALDMILTGKHIRA-RQALRLGLVDDAVPQSIL 198
>sp|B4TQC2|FADJ_SALSV Fatty acid oxidation complex subunit alpha OS=Salmonella
schwarzengrund (strain CVM19633) GN=fadJ PE=3 SV=1
Length = 715
Score = 40.4 bits (93), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 7/150 (4%)
Query: 56 LICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTE--KTLLAMPENGIGLFPDVGFS 113
L+ +I P I+ + G +G G+ ++ RI T+ KT+L +PE +GL P G +
Sbjct: 93 LMAEIQALPVPVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGT 152
Query: 114 YIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDP 173
+ G S + +TGK++ AL AGL D VP L EA + + E
Sbjct: 153 QRLPR-LVGVSTALDMILTGKQLRA-RQALRAGLVDDVVPQ---TILLEAAVELAKKERL 207
Query: 174 HQDIVALLAKYSSDPEGEAPLKLLLPQITS 203
Q + + + + P G A L L+ + T+
Sbjct: 208 AQRTLPVRERILAGPLGRALLFRLVRKKTA 237
>sp|Q1Q8J9|FADB_PSYCK Fatty acid oxidation complex subunit alpha OS=Psychrobacter
cryohalolentis (strain K5) GN=fadB PE=3 SV=1
Length = 719
Score = 40.4 bits (93), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 70/156 (44%), Gaps = 30/156 (19%)
Query: 66 PYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSV 125
P ++ ++G +G G ++ YR++++K ++ +PE +G+FP GF GG+V
Sbjct: 105 PKVAAINGAALGGGCEMTLVCEYRVMSDKAIIGLPETQLGIFP--GF---------GGTV 153
Query: 126 GAYLGMTGKRISTPSDAL-FAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQD-IVALLAK 183
R+ +AL GT P L +LK L+ T + D QD + L+ K
Sbjct: 154 ------RSTRVIGIDNALELIATGT---PKKALDALKLGLVDATVAADDLQDAAIDLVKK 204
Query: 184 YSSD--------PEGEAPLKLLLPQITSCFSSEKSV 211
SD E P+KL + F+S K +
Sbjct: 205 CISDELDWQAKREEKLVPVKLNQLEQAMAFNSAKGM 240
>sp|Q8ZNA7|FADJ_SALTY Fatty acid oxidation complex subunit alpha OS=Salmonella
typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
GN=fadJ PE=3 SV=1
Length = 715
Score = 40.4 bits (93), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 7/150 (4%)
Query: 56 LICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTE--KTLLAMPENGIGLFPDVGFS 113
L+ +I P I+ + G +G G+ ++ RI T+ KT+L +PE +GL P G +
Sbjct: 93 LMAEIQALPVPVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGT 152
Query: 114 YIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDP 173
+ G S + +TGK++ AL AGL D VP L EA + + E
Sbjct: 153 QRLPR-LVGVSTALDMILTGKQLRA-RQALKAGLVDDVVPQ---TILLEAAVELAKKERL 207
Query: 174 HQDIVALLAKYSSDPEGEAPLKLLLPQITS 203
Q + + + + P G A L L+ + T+
Sbjct: 208 AQRTLPVRERILAGPLGRALLFRLVRKKTA 237
>sp|B5FPN1|FADJ_SALDC Fatty acid oxidation complex subunit alpha OS=Salmonella dublin
(strain CT_02021853) GN=fadJ PE=3 SV=1
Length = 715
Score = 40.4 bits (93), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 7/150 (4%)
Query: 56 LICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTE--KTLLAMPENGIGLFPDVGFS 113
L+ +I P I+ + G +G G+ ++ RI T+ KT+L +PE +GL P G +
Sbjct: 93 LMAEIQALPVPVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGT 152
Query: 114 YIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDP 173
+ G S + +TGK++ AL AGL D VP L EA + + E
Sbjct: 153 QRLPRLV-GVSTALDMILTGKQLRA-RQALKAGLVDDVVPQ---TILLEAAVELAKKERL 207
Query: 174 HQDIVALLAKYSSDPEGEAPLKLLLPQITS 203
Q + + + + P G A L L+ + T+
Sbjct: 208 AQRTLPVRERILAGPLGRALLFRLVRKKTA 237
>sp|B4SZR0|FADJ_SALNS Fatty acid oxidation complex subunit alpha OS=Salmonella newport
(strain SL254) GN=fadJ PE=3 SV=1
Length = 715
Score = 40.4 bits (93), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 7/150 (4%)
Query: 56 LICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTE--KTLLAMPENGIGLFPDVGFS 113
L+ +I P I+ + G +G G+ ++ RI T+ KT+L +PE +GL P G +
Sbjct: 93 LMAEIQALPVPVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGT 152
Query: 114 YIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDP 173
+ G S + +TGK++ AL AGL D VP L EA + + E
Sbjct: 153 QRLPR-LVGVSTALDMILTGKQLRA-RQALKAGLVDDVVPQ---TILLEAAVELAKKERL 207
Query: 174 HQDIVALLAKYSSDPEGEAPLKLLLPQITS 203
Q + + + + P G A L L+ + T+
Sbjct: 208 AQRTLPVRERILAGPLGRALLFRLVRKKTA 237
>sp|Q8Z4Z0|FADJ_SALTI Fatty acid oxidation complex subunit alpha OS=Salmonella typhi
GN=fadJ PE=3 SV=1
Length = 715
Score = 40.4 bits (93), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 7/150 (4%)
Query: 56 LICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTE--KTLLAMPENGIGLFPDVGFS 113
L+ +I P I+ + G +G G+ ++ RI T+ KT+L +PE +GL P G +
Sbjct: 93 LMAEIQALPVPVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGT 152
Query: 114 YIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDP 173
+ G S + +TGK++ AL AGL D VP L EA + + E
Sbjct: 153 QRLPR-LVGVSTALDMILTGKQLRA-RQALKAGLVDDVVPQ---TILLEAAVELAKKERL 207
Query: 174 HQDIVALLAKYSSDPEGEAPLKLLLPQITS 203
Q + + + + P G A L L+ + T+
Sbjct: 208 AQRTLPVRERILAGPLGRALLFRLVRKKTA 237
>sp|Q57LW6|FADJ_SALCH Fatty acid oxidation complex subunit alpha OS=Salmonella
choleraesuis (strain SC-B67) GN=fadJ PE=3 SV=1
Length = 715
Score = 40.4 bits (93), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 7/150 (4%)
Query: 56 LICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTE--KTLLAMPENGIGLFPDVGFS 113
L+ +I P I+ + G +G G+ ++ RI T+ KT+L +PE +GL P G +
Sbjct: 93 LMAEIQALPVPVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGT 152
Query: 114 YIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDP 173
+ G S + +TGK++ AL AGL D VP L EA + + E
Sbjct: 153 QRLPR-LVGVSTALDMILTGKQLRA-RQALKAGLVDDVVPQ---TILLEAAVELAKKERL 207
Query: 174 HQDIVALLAKYSSDPEGEAPLKLLLPQITS 203
Q + + + + P G A L L+ + T+
Sbjct: 208 AQRTLPVRERILAGPLGRALLFRLVRKKTA 237
>sp|A9N453|FADJ_SALPB Fatty acid oxidation complex subunit alpha OS=Salmonella paratyphi
B (strain ATCC BAA-1250 / SPB7) GN=fadJ PE=3 SV=1
Length = 715
Score = 40.0 bits (92), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 7/150 (4%)
Query: 56 LICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTE--KTLLAMPENGIGLFPDVGFS 113
L+ +I P I+ + G +G G+ ++ RI T+ KT+L +PE +GL P G +
Sbjct: 93 LMAEIQALPVPVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGT 152
Query: 114 YIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDP 173
+ G S + +TGK++ AL AGL D VP L EA + + E
Sbjct: 153 QRLPR-LVGVSTALDMILTGKQLRA-RQALKAGLVDDVVPQ---TILLEAAVELAKKERL 207
Query: 174 HQDIVALLAKYSSDPEGEAPLKLLLPQITS 203
Q + + + + P G A L L+ + T+
Sbjct: 208 AQRTLPVRERILAGPLGRALLFRLVRKKTA 237
>sp|B5RCL3|FADJ_SALG2 Fatty acid oxidation complex subunit alpha OS=Salmonella gallinarum
(strain 287/91 / NCTC 13346) GN=fadJ PE=3 SV=1
Length = 715
Score = 40.0 bits (92), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 7/150 (4%)
Query: 56 LICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTE--KTLLAMPENGIGLFPDVGFS 113
L+ +I P I+ + G +G G+ ++ RI T+ KT+L +PE +GL P G +
Sbjct: 93 LMAEIQALPVPVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGT 152
Query: 114 YIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDP 173
+ G S + +TGK++ AL AGL D VP L EA + + E
Sbjct: 153 QRLPRLV-GVSTALDMILTGKQLRA-RQALKAGLVDDVVPQ---TILLEAAVELAKKERL 207
Query: 174 HQDIVALLAKYSSDPEGEAPLKLLLPQITS 203
Q + + + + P G A L L+ + T+
Sbjct: 208 AQRTLPVRERILAGPLGRALLFRLVRKKTA 237
>sp|B5R3R9|FADJ_SALEP Fatty acid oxidation complex subunit alpha OS=Salmonella
enteritidis PT4 (strain P125109) GN=fadJ PE=3 SV=1
Length = 715
Score = 40.0 bits (92), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 7/150 (4%)
Query: 56 LICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTE--KTLLAMPENGIGLFPDVGFS 113
L+ +I P I+ + G +G G+ ++ RI T+ KT+L +PE +GL P G +
Sbjct: 93 LMAEIQALPVPVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGT 152
Query: 114 YIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDP 173
+ G S + +TGK++ AL AGL D VP L EA + + E
Sbjct: 153 QRLPR-LVGVSTALDMILTGKQLRA-RQALKAGLVDDVVPQ---TILLEAAVELAKKERL 207
Query: 174 HQDIVALLAKYSSDPEGEAPLKLLLPQITS 203
Q + + + + P G A L L+ + T+
Sbjct: 208 AQRTLPVRERILAGPLGRALLFRLVRKKTA 237
>sp|B4TCA8|FADJ_SALHS Fatty acid oxidation complex subunit alpha OS=Salmonella heidelberg
(strain SL476) GN=fadJ PE=3 SV=1
Length = 715
Score = 40.0 bits (92), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 7/150 (4%)
Query: 56 LICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTE--KTLLAMPENGIGLFPDVGFS 113
L+ +I P I+ + G +G G+ ++ RI T+ KT+L +PE +GL P G +
Sbjct: 93 LMAEIQALPVPVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGT 152
Query: 114 YIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDP 173
+ G S + +TGK++ AL AGL D VP L EA + + E
Sbjct: 153 QRLPR-LVGVSTALDMILTGKQLRA-RQALKAGLVDDVVPQ---TILLEAAVELAKKERL 207
Query: 174 HQDIVALLAKYSSDPEGEAPLKLLLPQITS 203
Q + + + + P G A L L+ + T+
Sbjct: 208 AQRTLPVRERILAGPLGRALLFRLVRKKTA 237
>sp|B5EZR9|FADJ_SALA4 Fatty acid oxidation complex subunit alpha OS=Salmonella agona
(strain SL483) GN=fadJ PE=3 SV=1
Length = 715
Score = 40.0 bits (92), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 7/150 (4%)
Query: 56 LICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTE--KTLLAMPENGIGLFPDVGFS 113
L+ +I P I+ + G +G G+ ++ RI T+ KT+L +PE +GL P G +
Sbjct: 93 LMAEIQALPVPVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGT 152
Query: 114 YIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDP 173
+ G S + +TGK++ AL AGL D VP L EA + + E
Sbjct: 153 QRLPR-LVGVSTALDMILTGKQLRA-RQALKAGLVDDVVPQ---TILLEAAVELAKKERL 207
Query: 174 HQDIVALLAKYSSDPEGEAPLKLLLPQITS 203
Q + + + + P G A L L+ + T+
Sbjct: 208 AQRTLPVRERILAGPLGRALLFRLVRKKTA 237
>sp|A6TC19|FADJ_KLEP7 Fatty acid oxidation complex subunit alpha OS=Klebsiella pneumoniae
subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
GN=fadJ PE=3 SV=1
Length = 714
Score = 39.7 bits (91), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 56 LICKISEYKKPYISLMDGVTMGFGI--GISGHGRYRIVTEKTLLAMPENGIGLFPDVGFS 113
++ +I P I+ + G +G G+ ++ HGR EKT L +PE +GL P G +
Sbjct: 93 IMAEIHGLSIPVIAAIHGACLGGGLELALACHGRICSDDEKTRLGLPEVQLGLLPGSGGT 152
Query: 114 YIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNL 157
+ G S + +TGK++ P AL AGL + VP L
Sbjct: 153 QRLPRLI-GVSTALDMMLTGKQLR-PRQALKAGLVDEVVPQAIL 194
>sp|B7LLD0|FADJ_ESCF3 Fatty acid oxidation complex subunit alpha OS=Escherichia
fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73)
GN=fadJ PE=3 SV=1
Length = 714
Score = 39.3 bits (90), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 56 LICKISEYKKPYISLMDGVTMGFGI--GISGHGRYRIVTEKTLLAMPENGIGLFPDVGFS 113
L+ +I P I+ + G +G G+ ++ HGR KT+L +PE +GL P G +
Sbjct: 93 LMAEIHALPVPVIAAIHGACLGGGLELALACHGRICTDDPKTILGLPEVQLGLLPGSGGT 152
Query: 114 YIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNL 157
+ G S + +TGK++ P AL +GL + VP L
Sbjct: 153 QRLPRLV-GLSTALDMILTGKQLR-PGQALKSGLVDEIVPQSIL 194
>sp|B7NP24|FADJ_ECO7I Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O7:K1 (strain IAI39 / ExPEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 39.3 bits (90), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 81/180 (45%), Gaps = 11/180 (6%)
Query: 17 ISSFPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTM 76
IS+ P+N I G + +N + + Q +E++ L+ +I P I+ + G +
Sbjct: 58 ISAKPDN-FIAG-ADINMIGNCKTAQEAEVLA--RQGQQLMAEIHALPVPVIAAIHGACL 113
Query: 77 GFGI--GISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGK 134
G G+ ++ HGR KT+L +PE +GL P G + + G S + +TGK
Sbjct: 114 GGGLELALACHGRVCTDDAKTVLGLPEVQLGLLPGSGGTQRLPRLI-GVSTALEMILTGK 172
Query: 135 RISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPL 194
++ AL GL D VP L EA + + + P + + + + P G A L
Sbjct: 173 QLRA-KQALKLGLVDDVVPQ---SILLEAAVELAKQDRPSSRPLPVRERILAGPLGRALL 228
>sp|P40939|ECHA_HUMAN Trifunctional enzyme subunit alpha, mitochondrial OS=Homo sapiens
GN=HADHA PE=1 SV=2
Length = 763
Score = 39.3 bits (90), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 104/238 (43%), Gaps = 29/238 (12%)
Query: 43 LSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTE--KTLLAMP 100
L E+ ++ ++ K+ + KP ++ ++G +G G+ ++ +YRI T+ KT+L P
Sbjct: 113 LQEVTQLSQEAQRIVEKLEKSTKPIVAAINGSCLGGGLEVAISCQYRIATKDRKTVLGTP 172
Query: 101 ENGIGLFPDVGFSYIAAKGPGGGSVGAYLGM--TGKRISTPS-------DALFAGLGTDY 151
E +G P G + K G V A L M TG+ I D L LG
Sbjct: 173 EVLLGALPGAGGTQRLPKMVG---VPAALDMMLTGRSIRADRAKKMGLVDQLVEPLGPGL 229
Query: 152 VP--SGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPL--KLLLPQITSCFSS 207
P + L+E +A+TF++ LA P+ + L KL +T F
Sbjct: 230 KPPEERTIEYLEE--VAITFAKG--------LADKKISPKRDKGLVEKLTAYAMTIPFVR 279
Query: 208 EKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFS-LCLTQKYFSKVASAHGK 264
++ +++ E+++K + + D G+ +G+ LC +QK+ V + K
Sbjct: 280 QQVYKKVEEKVRKQTKGLYPAPLKIIDVVKTGIEQGSDAGYLCESQKFGELVMTKESK 337
>sp|Q4FQC6|FADB_PSYA2 Fatty acid oxidation complex subunit alpha OS=Psychrobacter
arcticus (strain DSM 17307 / 273-4) GN=fadB PE=3 SV=1
Length = 719
Score = 38.9 bits (89), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 19/118 (16%)
Query: 66 PYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSV 125
P ++ ++G +G G ++ YR++++K ++ +PE +G+FP GF GG+V
Sbjct: 105 PKVAAINGAALGGGCEMTLVCEYRVMSDKAIIGLPETQLGIFP--GF---------GGTV 153
Query: 126 GAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAK 183
R+ +AL L P L +LK L+ T + D QD L K
Sbjct: 154 ------RSTRVIGIDNAL--ELIATGAPKKALDALKLGLVDATVAADDLQDAAIDLVK 203
>sp|Q29554|ECHA_PIG Trifunctional enzyme subunit alpha, mitochondrial OS=Sus scrofa
GN=HADHA PE=1 SV=1
Length = 763
Score = 38.9 bits (89), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Query: 17 ISSFPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTM 76
ISS P I G + +N L + T +Q E+ ++ K+ + KP ++ ++G +
Sbjct: 91 ISSKPG-CFIAG-ADINMLSACTTSQ--EVTQISQEAQRTFEKLEKSTKPIVAAINGTCL 146
Query: 77 GFGIGISGHGRYRIVT--EKTLLAMPENGIGLFPDVG 111
G G+ ++ +YRI T +KT+L PE +G+ P G
Sbjct: 147 GGGLELAISCQYRIATKDKKTVLGAPEVLLGILPGAG 183
>sp|B1LME7|FADJ_ECOSM Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain SMS-3-5 / SECEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 38.5 bits (88), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 56 LICKISEYKKPYISLMDGVTMGFGI--GISGHGRYRIVTEKTLLAMPENGIGLFPDVGFS 113
L+ +I P I+ + G +G G+ ++ HGR KT+L +PE +GL P G +
Sbjct: 93 LMAEIHALPVPVIAAIHGACLGGGLELALACHGRVCTDDAKTVLGLPEVQLGLLPGSGGT 152
Query: 114 YIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDP 173
+ G S + +TGK++ AL GL D VP L EA + + + P
Sbjct: 153 QRLPRLI-GVSTALEMILTGKQLRA-KQALKLGLVDDVVPQ---SILLEAAVELAKQDRP 207
Query: 174 HQDIVALLAKYSSDPEGEAPL 194
+ + + + P G A L
Sbjct: 208 SSRPLPVRERILAGPLGRALL 228
>sp|Q8FFG4|FADJ_ECOL6 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=fadJ PE=3
SV=1
Length = 714
Score = 38.5 bits (88), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 11/180 (6%)
Query: 17 ISSFPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTM 76
IS+ P+N I G + +N + + Q +E + L+ +I P I+ + G +
Sbjct: 58 ISAKPDN-FIAG-ADINMIANCKTAQEAEALA--RQGQQLMAEIHALPVPVIAAIHGACL 113
Query: 77 GFGI--GISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGK 134
G G+ ++ HGR KT+L +PE +GL P G + + G S + +TGK
Sbjct: 114 GGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLI-GVSTALEMILTGK 172
Query: 135 RISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPL 194
++ AL GL D VP L EA + + + P + + + + P G A L
Sbjct: 173 QLRA-KQALKLGLVDDVVPH---SILLEAAVELAKQDRPSSRPLPVRERILAGPLGRALL 228
>sp|B7N5V2|FADJ_ECOLU Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O17:K52:H18 (strain UMN026 / ExPEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 38.5 bits (88), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 56 LICKISEYKKPYISLMDGVTMGFGI--GISGHGRYRIVTEKTLLAMPENGIGLFPDVGFS 113
L+ +I P I+ + G +G G+ ++ HGR KT+L +PE +GL P G +
Sbjct: 93 LMAEIHALPVPVIAAIHGACLGGGLELALACHGRMCTDDPKTVLGLPEVQLGLLPGSGGT 152
Query: 114 YIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDP 173
+ G S + +TGK++ AL GL D VP L EA + + + P
Sbjct: 153 QRLPRLI-GVSTALEMILTGKQLRA-KQALKLGLVDDVVPQ---SILLEAAVELAKQDRP 207
Query: 174 HQDIVALLAKYSSDPEGEAPL 194
+ + + + P G A L
Sbjct: 208 SSRPLPVRERILAGPLGRALL 228
>sp|Q8XCP2|FADJ_ECO57 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O157:H7 GN=fadJ PE=3 SV=1
Length = 714
Score = 38.1 bits (87), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 56 LICKISEYKKPYISLMDGVTMGFGI--GISGHGRYRIVTEKTLLAMPENGIGLFPDVGFS 113
L+ +I P I+ + G +G G+ ++ HGR KT+L +PE +GL P G +
Sbjct: 93 LMAEIHALPIPVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGT 152
Query: 114 YIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDP 173
+ G S + +TGK++ AL GL D VP L EA + + + P
Sbjct: 153 QRLPRLI-GVSTALEMILTGKQLRA-KQALKLGLVDDVVPH---SILLEAAVELAKKDRP 207
Query: 174 HQDIVALLAKYSSDPEGEAPL 194
+ + + + P G A L
Sbjct: 208 SSRPLPVRERILAGPLGRAQL 228
>sp|Q0T2E6|FADJ_SHIF8 Fatty acid oxidation complex subunit alpha OS=Shigella flexneri
serotype 5b (strain 8401) GN=fadJ PE=3 SV=1
Length = 714
Score = 38.1 bits (87), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 64/141 (45%), Gaps = 7/141 (4%)
Query: 56 LICKISEYKKPYISLMDGVTMGFGI--GISGHGRYRIVTEKTLLAMPENGIGLFPDVGFS 113
L+ +I+ P I+ + G +G G+ ++ HGR KT+L +PE +GL P G +
Sbjct: 93 LMAEINALPIPVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGT 152
Query: 114 YIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDP 173
+ G S + +TGK++ AL GL D VP L EA + + + P
Sbjct: 153 QRLPRLI-GVSTALEMILTGKQLRA-KQALKLGLVDDVVPH---SILLEAAVELAKKDRP 207
Query: 174 HQDIVALLAKYSSDPEGEAPL 194
+ + + + P G A L
Sbjct: 208 SSRPLPVRERILAGPLGRALL 228
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.133 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 125,543,518
Number of Sequences: 539616
Number of extensions: 5329493
Number of successful extensions: 14350
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 143
Number of HSP's that attempted gapping in prelim test: 14245
Number of HSP's gapped (non-prelim): 218
length of query: 338
length of database: 191,569,459
effective HSP length: 118
effective length of query: 220
effective length of database: 127,894,771
effective search space: 28136849620
effective search space used: 28136849620
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 61 (28.1 bits)