Query 019602
Match_columns 338
No_of_seqs 162 out of 1637
Neff 7.4
Searched_HMMs 46136
Date Fri Mar 29 03:04:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019602.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019602hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02851 3-hydroxyisobutyryl-C 100.0 2.1E-55 4.6E-60 429.2 28.0 294 20-331 94-391 (407)
2 PLN02988 3-hydroxyisobutyryl-C 100.0 2.7E-55 5.9E-60 426.9 25.9 293 21-331 62-358 (381)
3 KOG1684 Enoyl-CoA hydratase [L 100.0 4.6E-55 1E-59 407.3 23.4 303 19-338 90-393 (401)
4 PLN02157 3-hydroxyisobutyryl-C 100.0 6.4E-54 1.4E-58 418.8 26.5 300 20-337 89-392 (401)
5 PRK05617 3-hydroxyisobutyryl-C 100.0 2.6E-53 5.6E-58 409.3 25.6 288 19-328 55-342 (342)
6 PLN02874 3-hydroxyisobutyryl-C 100.0 1.9E-51 4E-56 401.0 25.0 293 20-332 63-359 (379)
7 PLN02600 enoyl-CoA hydratase 100.0 3E-42 6.6E-47 319.4 21.7 206 18-312 46-251 (251)
8 PRK09076 enoyl-CoA hydratase; 100.0 6.6E-42 1.4E-46 318.3 22.3 204 19-311 54-257 (258)
9 PRK05980 enoyl-CoA hydratase; 100.0 6.4E-42 1.4E-46 318.7 21.3 206 19-309 55-260 (260)
10 PRK08150 enoyl-CoA hydratase; 100.0 1.2E-41 2.6E-46 316.1 21.3 203 20-311 52-254 (255)
11 PRK05862 enoyl-CoA hydratase; 100.0 5.7E-42 1.2E-46 318.6 18.7 202 20-312 56-257 (257)
12 PRK07657 enoyl-CoA hydratase; 100.0 1.5E-41 3.2E-46 316.3 21.4 205 19-312 56-260 (260)
13 PRK06142 enoyl-CoA hydratase; 100.0 1E-41 2.2E-46 319.3 18.7 206 21-311 59-272 (272)
14 PRK05809 3-hydroxybutyryl-CoA 100.0 3.1E-41 6.7E-46 314.1 21.3 203 21-312 57-260 (260)
15 PRK07658 enoyl-CoA hydratase; 100.0 3.9E-41 8.4E-46 312.9 20.9 204 20-311 53-256 (257)
16 PRK08258 enoyl-CoA hydratase; 100.0 3.7E-41 8E-46 316.4 20.9 207 20-311 69-276 (277)
17 TIGR02280 PaaB1 phenylacetate 100.0 3.9E-41 8.4E-46 312.8 20.8 206 20-311 50-255 (256)
18 PRK06127 enoyl-CoA hydratase; 100.0 4.6E-41 9.9E-46 314.5 21.1 207 19-312 63-269 (269)
19 PRK09245 enoyl-CoA hydratase; 100.0 2.3E-41 5E-46 316.0 18.2 208 20-312 56-266 (266)
20 PRK07799 enoyl-CoA hydratase; 100.0 2.8E-41 6E-46 315.0 18.6 206 20-312 57-263 (263)
21 PLN02664 enoyl-CoA hydratase/d 100.0 6.8E-41 1.5E-45 314.3 21.3 208 19-311 59-274 (275)
22 PRK09674 enoyl-CoA hydratase-i 100.0 2.5E-41 5.4E-46 314.0 18.1 201 20-311 54-254 (255)
23 PRK08140 enoyl-CoA hydratase; 100.0 6.9E-41 1.5E-45 312.1 21.1 207 20-311 55-261 (262)
24 PRK08139 enoyl-CoA hydratase; 100.0 4.7E-41 1E-45 313.9 19.5 205 19-312 62-266 (266)
25 PRK08138 enoyl-CoA hydratase; 100.0 4.5E-41 9.7E-46 313.3 18.6 201 20-311 60-260 (261)
26 PRK06563 enoyl-CoA hydratase; 100.0 2.9E-41 6.3E-46 313.5 16.5 203 20-311 51-254 (255)
27 PRK07659 enoyl-CoA hydratase; 100.0 4.7E-41 1E-45 313.0 17.5 205 19-312 56-260 (260)
28 KOG1680 Enoyl-CoA hydratase [L 100.0 6.5E-42 1.4E-46 310.6 11.2 219 2-311 66-289 (290)
29 PRK06494 enoyl-CoA hydratase; 100.0 2E-40 4.2E-45 308.6 20.6 203 18-312 55-259 (259)
30 PRK05981 enoyl-CoA hydratase; 100.0 1.7E-40 3.6E-45 310.2 19.8 206 21-311 58-265 (266)
31 PRK03580 carnitinyl-CoA dehydr 100.0 2.3E-40 5E-45 308.5 20.6 203 19-311 54-260 (261)
32 PRK07468 enoyl-CoA hydratase; 100.0 1E-40 2.2E-45 311.1 18.1 205 20-311 57-261 (262)
33 PRK05995 enoyl-CoA hydratase; 100.0 8.8E-41 1.9E-45 311.4 17.6 206 20-312 56-262 (262)
34 PRK08252 enoyl-CoA hydratase; 100.0 1.3E-40 2.8E-45 309.0 18.5 200 20-312 55-254 (254)
35 PRK07511 enoyl-CoA hydratase; 100.0 2E-40 4.3E-45 308.7 18.9 204 21-310 56-259 (260)
36 PRK06143 enoyl-CoA hydratase; 100.0 8E-40 1.7E-44 304.0 19.8 196 19-303 59-254 (256)
37 PRK05864 enoyl-CoA hydratase; 100.0 4.4E-40 9.5E-45 309.0 18.1 208 20-312 62-275 (276)
38 PRK06688 enoyl-CoA hydratase; 100.0 6E-40 1.3E-44 305.2 18.8 201 21-311 58-258 (259)
39 PRK05674 gamma-carboxygeranoyl 100.0 6.2E-40 1.4E-44 306.2 18.8 206 19-311 57-263 (265)
40 TIGR01929 menB naphthoate synt 100.0 8.1E-40 1.8E-44 304.5 19.3 205 18-311 54-258 (259)
41 PRK07327 enoyl-CoA hydratase; 100.0 5.6E-40 1.2E-44 307.0 18.0 204 20-311 64-267 (268)
42 PRK09120 p-hydroxycinnamoyl Co 100.0 5.9E-40 1.3E-44 307.9 18.2 200 20-303 60-262 (275)
43 TIGR03210 badI 2-ketocyclohexa 100.0 1.5E-39 3.3E-44 302.2 19.6 202 18-311 53-255 (256)
44 PRK06210 enoyl-CoA hydratase; 100.0 1.3E-39 2.8E-44 305.1 19.0 206 20-311 58-271 (272)
45 PRK06495 enoyl-CoA hydratase; 100.0 1.8E-39 4E-44 301.8 19.7 202 20-311 55-256 (257)
46 PRK11423 methylmalonyl-CoA dec 100.0 1.6E-39 3.5E-44 302.8 19.2 203 21-312 58-261 (261)
47 PRK07260 enoyl-CoA hydratase; 100.0 2.4E-39 5.2E-44 300.6 19.3 200 20-303 54-253 (255)
48 PRK06144 enoyl-CoA hydratase; 100.0 2.8E-39 6E-44 301.4 19.5 202 18-311 59-261 (262)
49 PRK08260 enoyl-CoA hydratase; 100.0 1.9E-39 4.2E-44 307.5 17.9 209 20-312 56-278 (296)
50 PRK07396 dihydroxynaphthoic ac 100.0 5.4E-39 1.2E-43 301.1 19.9 204 19-311 65-268 (273)
51 PRK07509 enoyl-CoA hydratase; 100.0 3.5E-39 7.7E-44 300.6 18.3 203 20-310 55-261 (262)
52 TIGR03189 dienoyl_CoA_hyt cycl 100.0 1.1E-38 2.3E-43 295.7 20.0 197 20-311 52-250 (251)
53 PRK07938 enoyl-CoA hydratase; 100.0 1.4E-38 3.1E-43 294.5 19.8 197 20-307 53-249 (249)
54 PRK06072 enoyl-CoA hydratase; 100.0 1.2E-38 2.6E-43 294.8 18.9 197 20-312 52-248 (248)
55 COG1024 CaiD Enoyl-CoA hydrata 100.0 2.5E-38 5.4E-43 294.1 20.2 200 20-309 57-257 (257)
56 PF00378 ECH: Enoyl-CoA hydrat 100.0 3.1E-39 6.8E-44 297.9 14.1 198 18-303 48-245 (245)
57 PLN02888 enoyl-CoA hydratase 100.0 1.1E-38 2.3E-43 297.9 17.3 199 20-310 62-262 (265)
58 PRK05870 enoyl-CoA hydratase; 100.0 6.2E-39 1.3E-43 296.9 15.1 192 20-300 55-247 (249)
59 PLN02921 naphthoate synthase 100.0 3.7E-38 8.1E-43 301.7 20.4 204 19-311 119-322 (327)
60 PRK07827 enoyl-CoA hydratase; 100.0 4.1E-38 8.8E-43 293.2 19.8 201 21-310 59-259 (260)
61 PRK07854 enoyl-CoA hydratase; 100.0 4.5E-38 9.8E-43 290.2 19.8 192 20-311 51-242 (243)
62 PRK06023 enoyl-CoA hydratase; 100.0 1.2E-38 2.6E-43 295.3 15.7 192 20-300 58-249 (251)
63 PLN03214 probable enoyl-CoA hy 100.0 2.6E-38 5.6E-43 297.1 17.4 195 23-303 68-263 (278)
64 PRK07112 polyketide biosynthes 100.0 8.9E-38 1.9E-42 290.2 19.1 202 19-311 53-254 (255)
65 PRK08259 enoyl-CoA hydratase; 100.0 5E-38 1.1E-42 291.7 17.2 198 19-307 54-251 (254)
66 PRK08321 naphthoate synthase; 100.0 2.7E-37 5.8E-42 293.5 20.2 204 23-312 87-298 (302)
67 PRK12478 enoyl-CoA hydratase; 100.0 9.9E-38 2.1E-42 295.9 15.8 208 19-315 56-284 (298)
68 PRK08184 benzoyl-CoA-dihydrodi 100.0 1.1E-36 2.3E-41 308.3 19.2 205 21-314 329-550 (550)
69 KOG1679 Enoyl-CoA hydratase [L 100.0 1.4E-37 3E-42 272.0 10.4 211 17-312 81-291 (291)
70 PRK07110 polyketide biosynthes 100.0 3.3E-36 7.2E-41 278.7 18.2 191 20-300 57-247 (249)
71 TIGR03222 benzo_boxC benzoyl-C 100.0 3.4E-36 7.3E-41 303.9 19.7 204 21-313 325-545 (546)
72 PRK06190 enoyl-CoA hydratase; 100.0 8.1E-36 1.8E-40 277.4 16.8 191 21-300 57-250 (258)
73 PRK08788 enoyl-CoA hydratase; 100.0 6.6E-34 1.4E-38 267.8 20.1 199 18-300 72-274 (287)
74 PRK05869 enoyl-CoA hydratase; 100.0 9.6E-35 2.1E-39 264.5 14.0 162 20-259 59-220 (222)
75 PRK11730 fadB multifunctional 100.0 1.8E-34 3.8E-39 302.0 17.0 236 21-302 60-296 (715)
76 PRK06213 enoyl-CoA hydratase; 100.0 8.5E-34 1.8E-38 259.5 16.0 176 19-282 51-227 (229)
77 PRK11154 fadJ multifunctional 100.0 1.8E-33 3.9E-38 294.3 19.8 234 18-303 58-294 (708)
78 KOG1681 Enoyl-CoA isomerase [L 100.0 1.9E-34 4.2E-39 254.4 8.5 213 14-310 64-290 (292)
79 TIGR03200 dearomat_oah 6-oxocy 100.0 4.8E-33 1E-37 265.6 18.1 263 2-303 57-328 (360)
80 TIGR02440 FadJ fatty oxidation 100.0 9.1E-33 2E-37 288.5 21.8 233 18-303 53-289 (699)
81 PRK08290 enoyl-CoA hydratase; 100.0 3E-33 6.5E-38 264.1 14.5 187 20-291 56-262 (288)
82 COG0447 MenB Dihydroxynaphthoi 100.0 2E-33 4.4E-38 246.3 5.7 221 3-311 49-277 (282)
83 TIGR02437 FadB fatty oxidation 100.0 2.3E-31 5E-36 278.2 18.9 237 21-303 60-297 (714)
84 PRK08272 enoyl-CoA hydratase; 100.0 7E-32 1.5E-36 256.5 13.7 164 19-259 61-245 (302)
85 KOG0016 Enoyl-CoA hydratase/is 100.0 7.3E-31 1.6E-35 236.4 14.6 200 19-301 59-261 (266)
86 PLN02267 enoyl-CoA hydratase/i 100.0 1.6E-30 3.4E-35 239.3 16.5 138 19-161 51-192 (239)
87 TIGR02441 fa_ox_alpha_mit fatt 100.0 8.5E-30 1.8E-34 267.1 21.0 240 18-303 65-321 (737)
88 KOG1682 Enoyl-CoA isomerase [L 100.0 1.4E-29 3.1E-34 220.2 15.3 206 17-311 81-286 (287)
89 cd06558 crotonase-like Crotona 100.0 6.7E-28 1.4E-32 214.2 13.1 142 21-166 52-193 (195)
90 TIGR03222 benzo_boxC benzoyl-C 99.9 2.7E-27 5.9E-32 239.3 14.2 146 18-166 73-224 (546)
91 PRK08184 benzoyl-CoA-dihydrodi 99.9 9.3E-27 2E-31 236.0 13.8 146 18-166 77-228 (550)
92 PF13766 ECH_C: 2-enoyl-CoA Hy 99.9 6.7E-23 1.4E-27 168.6 10.4 117 194-327 2-118 (118)
93 cd07020 Clp_protease_NfeD_1 No 99.7 8.1E-17 1.7E-21 143.0 9.4 103 55-159 49-171 (187)
94 cd07014 S49_SppA Signal peptid 99.6 8.5E-16 1.8E-20 135.2 6.6 103 55-159 62-174 (177)
95 cd07016 S14_ClpP_1 Caseinolyti 99.4 1.7E-12 3.8E-17 112.2 9.1 95 55-151 49-160 (160)
96 cd07019 S49_SppA_1 Signal pept 99.2 3.7E-11 8.1E-16 108.7 6.4 61 23-99 45-105 (211)
97 cd00394 Clp_protease_like Case 99.1 3.6E-10 7.9E-15 97.5 9.2 94 56-151 49-161 (161)
98 TIGR00705 SppA_67K signal pept 99.0 3.8E-10 8.2E-15 116.3 7.1 103 52-156 366-513 (584)
99 cd07021 Clp_protease_NfeD_like 98.9 7.7E-09 1.7E-13 91.1 9.4 100 53-154 47-171 (178)
100 cd07022 S49_Sppa_36K_type Sign 98.9 2.7E-09 5.9E-14 96.7 5.4 43 58-100 65-109 (214)
101 cd07023 S49_Sppa_N_C Signal pe 98.8 1.2E-08 2.6E-13 92.0 6.3 70 14-99 32-101 (208)
102 TIGR00706 SppA_dom signal pept 98.8 3.7E-08 8E-13 88.9 9.2 103 56-161 51-202 (207)
103 PRK12319 acetyl-CoA carboxylas 98.3 2.2E-05 4.7E-10 73.0 13.8 92 51-154 123-214 (256)
104 cd07015 Clp_protease_NfeD Nodu 98.2 8.5E-06 1.8E-10 71.4 9.2 99 55-154 49-165 (172)
105 CHL00198 accA acetyl-CoA carbo 98.2 3E-05 6.5E-10 74.0 13.3 92 51-154 179-270 (322)
106 cd07013 S14_ClpP Caseinolytic 98.2 8.7E-06 1.9E-10 70.7 8.5 96 55-151 49-162 (162)
107 cd07018 S49_SppA_67K_type Sign 98.1 7.1E-06 1.5E-10 74.8 7.9 48 53-101 67-114 (222)
108 PLN03230 acetyl-coenzyme A car 98.1 4.9E-05 1.1E-09 74.4 13.9 92 51-154 246-337 (431)
109 PRK00277 clpP ATP-dependent Cl 98.1 9E-06 2E-10 73.0 7.8 100 54-154 79-196 (200)
110 TIGR00513 accA acetyl-CoA carb 98.1 4.7E-05 1E-09 72.6 12.8 92 51-154 176-267 (316)
111 KOG1683 Hydroxyacyl-CoA dehydr 98.1 5.3E-06 1.1E-10 79.5 5.4 136 13-154 101-240 (380)
112 PRK05724 acetyl-CoA carboxylas 98.0 7.3E-05 1.6E-09 71.4 12.7 92 51-154 176-267 (319)
113 PLN03229 acetyl-coenzyme A car 98.0 9.2E-05 2E-09 76.8 13.6 92 51-154 267-358 (762)
114 PRK12553 ATP-dependent Clp pro 98.0 5.2E-05 1.1E-09 68.5 9.8 98 54-154 83-202 (207)
115 PF00574 CLP_protease: Clp pro 98.0 1.4E-05 3E-10 70.4 5.8 99 55-154 65-181 (182)
116 PRK14512 ATP-dependent Clp pro 97.9 9.7E-05 2.1E-09 66.2 10.0 100 54-154 71-188 (197)
117 cd07017 S14_ClpP_2 Caseinolyti 97.7 0.00011 2.5E-09 64.2 7.4 96 55-151 58-171 (171)
118 CHL00028 clpP ATP-dependent Cl 97.7 0.00018 3.9E-09 64.6 8.8 101 54-155 78-197 (200)
119 TIGR03133 malonate_beta malona 97.6 0.00047 1E-08 64.7 10.7 84 59-155 132-218 (274)
120 TIGR00493 clpP ATP-dependent C 97.6 0.00043 9.4E-09 61.7 9.6 98 55-153 75-190 (191)
121 PRK14513 ATP-dependent Clp pro 97.6 0.00054 1.2E-08 61.5 9.8 102 54-156 75-194 (201)
122 PRK12551 ATP-dependent Clp pro 97.5 0.00059 1.3E-08 61.1 8.7 101 54-155 73-191 (196)
123 PRK14514 ATP-dependent Clp pro 97.3 0.0012 2.6E-08 60.1 8.7 100 54-154 102-219 (221)
124 PRK07189 malonate decarboxylas 97.2 0.00086 1.9E-08 63.6 6.6 85 59-156 141-228 (301)
125 TIGR03134 malonate_gamma malon 97.1 0.0033 7.2E-08 57.9 9.6 97 50-157 90-192 (238)
126 PRK11778 putative inner membra 97.0 0.002 4.4E-08 62.0 7.4 101 57-159 147-291 (330)
127 PRK10949 protease 4; Provision 97.0 0.003 6.5E-08 65.9 9.1 109 53-164 385-539 (618)
128 TIGR00515 accD acetyl-CoA carb 97.0 0.0036 7.8E-08 59.2 8.7 90 56-164 185-275 (285)
129 PRK05654 acetyl-CoA carboxylas 96.9 0.0054 1.2E-07 58.2 9.1 90 56-164 186-276 (292)
130 PF01343 Peptidase_S49: Peptid 96.8 0.0011 2.3E-08 57.0 3.7 102 60-162 2-148 (154)
131 COG0825 AccA Acetyl-CoA carbox 96.8 0.0078 1.7E-07 56.3 9.0 90 53-154 177-266 (317)
132 CHL00174 accD acetyl-CoA carbo 96.7 0.0089 1.9E-07 56.6 9.3 85 62-165 205-290 (296)
133 PRK12552 ATP-dependent Clp pro 96.5 0.015 3.2E-07 53.0 8.5 98 54-154 97-214 (222)
134 COG0740 ClpP Protease subunit 96.3 0.018 4E-07 51.4 8.1 100 54-156 75-194 (200)
135 COG0616 SppA Periplasmic serin 96.1 0.025 5.5E-07 54.3 8.6 100 53-158 118-266 (317)
136 TIGR01117 mmdA methylmalonyl-C 96.0 0.041 8.9E-07 56.3 9.8 105 49-162 373-489 (512)
137 PF01972 SDH_sah: Serine dehyd 95.8 0.03 6.4E-07 52.3 7.2 60 52-111 106-165 (285)
138 PF01039 Carboxyl_trans: Carbo 95.6 0.04 8.7E-07 56.2 8.0 77 55-156 123-207 (493)
139 TIGR01117 mmdA methylmalonyl-C 94.7 0.038 8.2E-07 56.6 4.7 75 63-156 153-230 (512)
140 PLN02820 3-methylcrotonyl-CoA 94.4 0.081 1.7E-06 54.8 6.3 79 59-156 200-281 (569)
141 COG1030 NfeD Membrane-bound se 94.1 0.16 3.4E-06 50.5 7.2 102 51-153 72-187 (436)
142 PLN02157 3-hydroxyisobutyryl-C 92.5 0.19 4.2E-06 49.9 5.2 65 236-312 229-296 (401)
143 PLN02820 3-methylcrotonyl-CoA 92.4 0.43 9.3E-06 49.5 7.7 108 48-159 423-545 (569)
144 COG0777 AccD Acetyl-CoA carbox 91.9 0.8 1.7E-05 42.8 8.0 91 54-163 185-276 (294)
145 TIGR00705 SppA_67K signal pept 90.8 0.79 1.7E-05 47.8 7.7 48 51-99 113-160 (584)
146 COG4799 Acetyl-CoA carboxylase 90.4 0.29 6.4E-06 49.8 3.9 36 59-95 159-194 (526)
147 PF01039 Carboxyl_trans: Carbo 84.3 1.5 3.2E-05 44.8 5.0 106 48-161 351-471 (493)
148 PRK10949 protease 4; Provision 82.7 4.4 9.4E-05 42.7 7.7 48 51-99 132-179 (618)
149 COG4799 Acetyl-CoA carboxylase 76.3 2.4 5.2E-05 43.4 3.3 111 46-159 379-499 (526)
150 KOG0540 3-Methylcrotonyl-CoA c 67.7 12 0.00026 37.6 5.7 98 49-159 407-512 (536)
151 KOG0840 ATP-dependent Clp prot 65.9 22 0.00048 33.1 6.8 19 134-153 238-256 (275)
152 PF02601 Exonuc_VII_L: Exonucl 50.4 11 0.00024 36.0 2.2 39 55-95 98-136 (319)
153 smart00250 PLEC Plectin repeat 46.0 16 0.00036 23.3 1.8 18 132-150 18-35 (38)
154 PF09905 DUF2132: Uncharacteri 39.9 46 0.00099 24.2 3.4 37 193-238 23-60 (64)
155 PF00681 Plectin: Plectin repe 34.9 15 0.00033 24.4 0.4 19 131-150 17-35 (45)
156 PRK00286 xseA exodeoxyribonucl 33.0 29 0.00063 34.7 2.2 39 55-95 215-253 (438)
157 KOG0595 Serine/threonine-prote 31.7 79 0.0017 31.6 4.8 38 25-62 90-127 (429)
158 PF14222 MOR2-PAG1_N: Cell mor 25.8 1.6E+02 0.0035 30.7 6.2 62 197-258 455-516 (552)
159 PF11372 DUF3173: Domain of un 24.3 71 0.0015 22.9 2.3 29 297-326 27-55 (59)
160 COG3592 Uncharacterized conser 22.4 76 0.0016 23.5 2.1 44 286-333 25-68 (74)
161 TIGR02814 pfaD_fam PfaD family 20.6 9E+02 0.019 24.5 11.2 200 63-322 223-434 (444)
162 COG0412 Dienelactone hydrolase 20.6 1.3E+02 0.0028 27.5 3.9 39 51-89 94-134 (236)
163 KOG0333 U5 snRNP-like RNA heli 20.1 71 0.0015 33.1 2.2 30 65-94 351-381 (673)
No 1
>PLN02851 3-hydroxyisobutyryl-CoA hydrolase-like protein
Probab=100.00 E-value=2.1e-55 Score=429.18 Aligned_cols=294 Identities=33% Similarity=0.567 Sum_probs=255.1
Q ss_pred CCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeC
Q 019602 20 FPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAM 99 (338)
Q Consensus 20 ~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~ 99 (338)
..|++||+|+|++.+.......+.+....+++..+++...|.++|||+||+|||+|+|||++|+++||+|||+++++|++
T Consensus 94 G~GkaFcAGgDl~~l~~~~~~~~~~~~~~~f~~~~~l~~~i~~~pKPvIA~v~G~amGGG~gLal~~D~rVate~a~fam 173 (407)
T PLN02851 94 GSGRAFCSGADVVSLYHLINEGNVEECKLFFENLYKFVYLQGTYLKPNVAIMDGITMGCGAGISIPGMFRVVTDKTVFAH 173 (407)
T ss_pred CCCCCccCCcCHHHHHhhccccchHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCEEeeHHHHHHHhCCEEEEeCCceEec
Confidence 35689999999999864322222234556778888899999999999999999999999999999999999999999999
Q ss_pred CCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHHHH
Q 019602 100 PENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVA 179 (338)
Q Consensus 100 pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~ 179 (338)
||+++|++|++|++++|+|++|. .+++|++||++++ |+||+++||++++||++++......+.+.. ..+...+..
T Consensus 174 PE~~iGl~PdvG~s~~L~rl~g~--~g~~L~LTG~~i~-a~eA~~~GLa~~~v~~~~l~~l~~~l~~~~--~~~~~~~~~ 248 (407)
T PLN02851 174 PEVQMGFHPDAGASYYLSRLPGY--LGEYLALTGQKLN-GVEMIACGLATHYCLNARLPLIEERLGKLL--TDDPAVIED 248 (407)
T ss_pred chhccCCCCCccHHHHHHHhcCH--HHHHHHHhCCcCC-HHHHHHCCCceeecCHhhHHHHHHHHHhhc--cCCHHHHHH
Confidence 99999999999999999999993 7999999999999 999999999999999999966665555432 235566899
Q ss_pred HHHhhcCCC-CCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHHH
Q 019602 180 LLAKYSSDP-EGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKV 258 (338)
Q Consensus 180 ~l~~~~~~~-~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~~ 258 (338)
++++|.... ...+.+...++.|++||+.+ +++||++.|+.+... ++ .+||+++++.|.++||+|+++|+++++++
T Consensus 249 ~l~~~~~~~~~~~~~~~~~~~~I~~~F~~~-sv~~I~~~L~~~~~~-~~--~~wa~~~~~~l~~~SP~Sl~vt~~~~~~~ 324 (407)
T PLN02851 249 SLAQYGDLVYPDKSSVLHKIETIDKCFGHD-TVEEIIEALENEAAS-SY--DEWCKKALKKIKEASPLSLKVTLQSIREG 324 (407)
T ss_pred HHHHhccccCCCcccHHHHHHHHHHHhCCC-CHHHHHHHHHhcccc-cc--hHHHHHHHHHHHhcCcHHHHHHHHHHHHH
Confidence 999997542 23355666789999999976 999999999974211 11 48999999999999999999999999998
Q ss_pred hhhcCCCccccCCHHHHHHHHHHHHhhhC---CCCCHHHHHHhhhcCCCCCCCCCCCCcCCCCHHHHHhhhcCCCC
Q 019602 259 ASAHGKTDNELSKLSGVMKYEYRVALRSS---LRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGT 331 (338)
Q Consensus 259 ~~~~~~~~~~~~~l~~~l~~e~~~~~~~~---~~~d~~eg~~afl~eK~r~p~w~~~~~~~v~~~~v~~~~~~~~~ 331 (338)
. ..++++++++|+++..+++ .++||.|||||.|+||++.|+|++++++||+++.|+.+|+|++.
T Consensus 325 ~---------~~sl~e~l~~E~~l~~~~~~~~~~~DF~EGVRA~LIDKd~~P~W~p~sl~~V~~~~v~~~f~~~~~ 391 (407)
T PLN02851 325 R---------FQTLDQCLAREYRISLCGVSKWVSGDFCEGVRARLVDKDFAPKWDPPSLGEVSKDMVDCYFTPLDE 391 (407)
T ss_pred h---------cCCHHHHHHHHHHHHHHHHhcCccchHHHHHHHHhcCCCCCCCCCCCChhhCCHHHHHHHhCCCCC
Confidence 8 7799999999999999987 48999999999999999999999999999999999999999853
No 2
>PLN02988 3-hydroxyisobutyryl-CoA hydrolase
Probab=100.00 E-value=2.7e-55 Score=426.94 Aligned_cols=293 Identities=34% Similarity=0.599 Sum_probs=252.8
Q ss_pred CCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeCC
Q 019602 21 PNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMP 100 (338)
Q Consensus 21 ~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~p 100 (338)
.|++||+|+|++++..............+++..+.+..+|.++||||||+|||+|+|||++|+++||+|||+++++|++|
T Consensus 62 ~G~~FcAGgDl~~l~~~~~~~~~~~~~~~f~~~~~l~~~i~~~pKPvIa~v~G~a~GGG~~Lal~~D~rvate~a~f~mP 141 (381)
T PLN02988 62 HGRAFCAGGDVAAVVRDIEQGNWRLGANFFSDEYMLNYVMATYSKAQVSILNGIVMGGGAGVSVHGRFRIATENTVFAMP 141 (381)
T ss_pred CCCCcccCcCHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHCCCCEEEEecCeEeehhhHHhhcCCeEEEcCCcEEeCh
Confidence 55899999999987532222211222345565666777899999999999999999999999999999999999999999
Q ss_pred CCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHHHHH
Q 019602 101 ENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVAL 180 (338)
Q Consensus 101 e~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~ 180 (338)
|+++|++|++|++++|+|++|. .+++|++||++++ |.||+++|||+++||++++.+.+.++++.. ..+...+..+
T Consensus 142 E~~iGl~Pd~G~s~~L~rl~G~--~~~~l~LTG~~i~-a~eA~~~GLv~~vv~~~~l~~~~~~la~~~--~~~p~~~~~~ 216 (381)
T PLN02988 142 ETALGLFPDVGASYFLSRLPGF--FGEYVGLTGARLD-GAEMLACGLATHFVPSTRLTALEADLCRIG--SNDPTFASTI 216 (381)
T ss_pred hhhcCcCCCccHHHHHHHHHHH--HHHHHHHcCCCCC-HHHHHHcCCceEecCHhHHHHHHHHHHHhh--ccCHHHHHHH
Confidence 9999999999999999999993 7999999999999 999999999999999999999999888543 3445568888
Q ss_pred HHhhcCCCC-CCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHHHh
Q 019602 181 LAKYSSDPE-GEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVA 259 (338)
Q Consensus 181 l~~~~~~~~-~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~~~ 259 (338)
++.|..... .++.+...++.|++||+.+ |++||++.|+.+.+. ++ .+|++++++.|.++||+|+++|+++++++.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~I~~~f~~~-~~~~i~~~L~~~~~~-~~--~~wa~~~~~~l~~~sP~sl~vt~~~~~~~~ 292 (381)
T PLN02988 217 LDAYTQHPRLKPQSAYHRLDVIDRCFSRR-TVEEIISALEREATQ-EA--DGWISATIQALKKASPASLKISLRSIREGR 292 (381)
T ss_pred HHHhhcCCCCCCchHHHHHHHHHHHhCCC-CHHHHHHHHHhhccc-cc--cHHHHHHHHHHHhcCcHHHHHHHHHHHHHh
Confidence 998876542 1234445699999999976 999999999974211 11 489999999999999999999999999988
Q ss_pred hhcCCCccccCCHHHHHHHHHHHHhhhCC---CCCHHHHHHhhhcCCCCCCCCCCCCcCCCCHHHHHhhhcCCCC
Q 019602 260 SAHGKTDNELSKLSGVMKYEYRVALRSSL---RSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGT 331 (338)
Q Consensus 260 ~~~~~~~~~~~~l~~~l~~e~~~~~~~~~---~~d~~eg~~afl~eK~r~p~w~~~~~~~v~~~~v~~~~~~~~~ 331 (338)
..++.+++++|+++..+++. ++||.|||||.|+||++.|+|++++++||+++.|+.+|+|++.
T Consensus 293 ---------~~sl~e~~~~e~~~~~~~~~~~~~~DF~EGVRA~LiDKd~~P~W~p~~l~~v~~~~v~~~f~~~~~ 358 (381)
T PLN02988 293 ---------LQGVGQCLIREYRMVCHVMKGEISKDFVEGCRAILVDKDKNPKWEPRRLEDMKDSMVEQYFERVEE 358 (381)
T ss_pred ---------cCCHHHHHHHHHHHHHHHHhcCCCchHHHhHHHHhcCCCCCCCCCCCChhhCCHHHHHHHhCCCCc
Confidence 77999999999999999998 6999999999999999999999999999999999999999854
No 3
>KOG1684 consensus Enoyl-CoA hydratase [Lipid transport and metabolism]
Probab=100.00 E-value=4.6e-55 Score=407.27 Aligned_cols=303 Identities=47% Similarity=0.761 Sum_probs=280.8
Q ss_pred cCCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEe
Q 019602 19 SFPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLA 98 (338)
Q Consensus 19 s~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~ 98 (338)
+.++++||+|+|++.......++..+....+|+..|.+...|.++.||.||.+||..||||++|+++.-|||||+++.|+
T Consensus 90 gs~~raFCAGgDI~~~ae~~~d~~~~~~~~fF~~eYsl~~~igtY~KP~ValmdGITMGgG~GLS~hg~fRVATerT~~A 169 (401)
T KOG1684|consen 90 GSGGRAFCAGGDIKAVAESIKDKETPEVKKFFTEEYSLNHLIGTYLKPYVALMDGITMGGGVGLSVHGRFRVATERTVFA 169 (401)
T ss_pred cCCCceeecCccHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHhcCceEEEeeceeecCCcceeecceeEEeeccceec
Confidence 44699999999999776555566666788999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHHH
Q 019602 99 MPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIV 178 (338)
Q Consensus 99 ~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~ 178 (338)
|||+.||++|++|++++|+|++| +.+.|+.+||++++ +.||+..||++++|+++++....++|. .++..+|.+.++
T Consensus 170 mPEt~IGlfPDVG~Sy~lsrlpg--~lg~YLgLTG~rl~-GaD~~~~GlATHyv~S~~l~~Lee~L~-~~l~~dp~~~I~ 245 (401)
T KOG1684|consen 170 MPETGIGLFPDVGASYFLSRLPG--YLGLYLGLTGQRLS-GADALRCGLATHYVPSEKLPSLEERLL-KNLNDDPQSVIN 245 (401)
T ss_pred ccccccccccCccceeehhhCcc--HHHHhhhhccceec-chHHHHhcchhhccchhhhhHHHHHHh-hhcCCCcHHHHH
Confidence 99999999999999999999999 59999999999999 899999999999999999999888887 357788889999
Q ss_pred HHHHhhcCCCCC-CccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHH
Q 019602 179 ALLAKYSSDPEG-EAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSK 257 (338)
Q Consensus 179 ~~l~~~~~~~~~-~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~ 257 (338)
+.|++|.....+ +.-+.....+|+.||+.+ |.|||++.|++.+++.++ .+||.+++++|.+.||+|+++|.++++.
T Consensus 246 ~~l~~y~~~~~~~~~~~~~~~~~i~~~Fs~~-tVeeIie~lk~~q~~~~~--~ewak~tlk~L~k~SPtSLkvT~r~i~e 322 (401)
T KOG1684|consen 246 ETLEKYASPAKDESFSLSLKLDVINKCFSAN-TVEEIIEALKNYQQSADG--SEWAKETLKTLKKMSPTSLKVTLRQIRE 322 (401)
T ss_pred HHHHHhcccCCCccccchhhHHHHHHhhccc-cHHHHHHHHHHHhhhhhH--HHHHHHHHHHHhhcCCchHHHHHHHHHh
Confidence 999999999654 445567889999999998 999999999998887777 7999999999999999999999999998
Q ss_pred HhhhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCCCCCCCCCCCCcCCCCHHHHHhhhcCCCCCCCCcC
Q 019602 258 VASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGTGVEELK 337 (338)
Q Consensus 258 ~~~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK~r~p~w~~~~~~~v~~~~v~~~~~~~~~~~~~~~ 337 (338)
+. ..++++++.+||++..+++.+.||.||+||.|++|++.|+|++.++++|+.++|+.+|.|+++ .+|||
T Consensus 323 gs---------~~tl~~~l~~Eyr~s~~~~~~~DF~EGvRA~LIDKd~~PKW~p~~l~~V~e~~Vdn~F~~~p~-~~eLk 392 (401)
T KOG1684|consen 323 GS---------KQTLDQCLTMEYRLSLRMLMRGDFCEGVRAVLIDKDQNPKWDPASLADVTEDEVDNYFKPLPS-KSELK 392 (401)
T ss_pred hh---------HHHHHHHHHHHHHHHHHHhhccchhhhhhheeecCCcCCCCCCcchhhcCHHHHHHhccCCCC-ccccc
Confidence 88 789999999999999999999999999999999999999999999999999999999999776 78887
Q ss_pred C
Q 019602 338 V 338 (338)
Q Consensus 338 ~ 338 (338)
+
T Consensus 393 l 393 (401)
T KOG1684|consen 393 L 393 (401)
T ss_pred C
Confidence 5
No 4
>PLN02157 3-hydroxyisobutyryl-CoA hydrolase-like protein
Probab=100.00 E-value=6.4e-54 Score=418.83 Aligned_cols=300 Identities=30% Similarity=0.537 Sum_probs=250.2
Q ss_pred CCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeC
Q 019602 20 FPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAM 99 (338)
Q Consensus 20 ~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~ 99 (338)
..|++||+|+|+.++..............++...+.+..+|.++|||+||+|||+|+|||++|+++||+|||+++++|++
T Consensus 89 G~GkaFcAGgDl~~l~~~~~~~~~~~~~~~~~~~~~l~~~i~~~pkPvIA~v~G~a~GGG~~Lal~cD~rvate~a~fa~ 168 (401)
T PLN02157 89 GSGRAFCAGGDIVSLYHLRKRGSPDAIREFFSSLYSFIYLLGTYLKPHVAILNGVTMGGGTGVSIPGTFRVATDRTIFAT 168 (401)
T ss_pred CCCCCccCCcCHHHHHhhccccchHHHHHHHHHHHHHHHHHHhCCCCEEEEEeCeEeehhHHHHHhCCEEEEeCCCEEEC
Confidence 35689999999998864222222222345566666778889999999999999999999999999999999999999999
Q ss_pred CCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHHHH
Q 019602 100 PENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVA 179 (338)
Q Consensus 100 pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~ 179 (338)
||+++|++|++|++++|+|++| . .+++|++||++++ |+||+++|||+++||++++.+.. +++.. +...+...+..
T Consensus 169 PE~~iGl~Pd~G~s~~L~rl~G-~-~a~~L~LTG~~i~-A~eA~~~GLv~~vVp~~~l~~~~-~~~~~-i~~~~p~av~~ 243 (401)
T PLN02157 169 PETIIGFHPDAGASFNLSHLPG-R-LGEYLGLTGLKLS-GAEMLACGLATHYIRSEEIPVME-EQLKK-LLTDDPSVVES 243 (401)
T ss_pred hhhhcCCCCCccHHHHHHHhhh-H-HHHHHHHcCCcCC-HHHHHHcCCceEEeCHhHHHHHH-HHHHH-HHcCCHHHHHH
Confidence 9999999999999999999999 4 8999999999999 99999999999999999985444 44433 22345567888
Q ss_pred HHHhhcCCCC-CCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHHH
Q 019602 180 LLAKYSSDPE-GEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKV 258 (338)
Q Consensus 180 ~l~~~~~~~~-~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~~ 258 (338)
+++.+..... ....+....+.|+.||+.+ +++||++.|+.+.+..+ .+|++++++.|.++||+|+++|+++++++
T Consensus 244 ~k~~~~~~~~~~~~~l~~~~~~i~~~f~~~-d~~ei~~al~~~~~kr~---~~wa~~~~~~l~~~sP~Sl~vt~~~~~~~ 319 (401)
T PLN02157 244 CLEKCAEVAHPEKTGVIRRIDLLEKCFSHD-TVEEIIDSLEIEAGRRK---DTWCITTLRRLKESSPLSLKVALRSIREG 319 (401)
T ss_pred HHHHHhcccCCcchhHHHHHHHHHHHhcCC-CHHHHHHHHHhhhcccc---hHHHHHHHHHHHhcCcHHHHHHHHHHHHh
Confidence 8887765421 2234444578899999876 99999999976422111 47999999999999999999999999998
Q ss_pred hhhcCCCccccCCHHHHHHHHHHHHhhhCC---CCCHHHHHHhhhcCCCCCCCCCCCCcCCCCHHHHHhhhcCCCCCCCC
Q 019602 259 ASAHGKTDNELSKLSGVMKYEYRVALRSSL---RSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGTGVEE 335 (338)
Q Consensus 259 ~~~~~~~~~~~~~l~~~l~~e~~~~~~~~~---~~d~~eg~~afl~eK~r~p~w~~~~~~~v~~~~v~~~~~~~~~~~~~ 335 (338)
. ..++++++++|+++..+++. ++||.|||||.|+||++.|+|++++++||+++.|+.+|+|++.+-++
T Consensus 320 ~---------~~~l~e~~~~e~~~~~~~~~~~~~~DF~EGVRA~LiDKd~~P~W~p~~l~~V~~~~v~~~f~~~~~~~~~ 390 (401)
T PLN02157 320 R---------LQTLDQCLIREYRMSLQGLIGPMSGNFCEGVRARLIDKDEAPKWDPPSLEKVSEDMVDDYFCALTPTEPD 390 (401)
T ss_pred h---------cCCHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHcCCCCCCCCCCCChhhCCHHHHHHHhCCCCCCccc
Confidence 8 67999999999999999886 69999999999999999999999999999999999999998633344
Q ss_pred cC
Q 019602 336 LK 337 (338)
Q Consensus 336 ~~ 337 (338)
|+
T Consensus 391 l~ 392 (401)
T PLN02157 391 LD 392 (401)
T ss_pred cc
Confidence 54
No 5
>PRK05617 3-hydroxyisobutyryl-CoA hydrolase; Provisional
Probab=100.00 E-value=2.6e-53 Score=409.26 Aligned_cols=288 Identities=39% Similarity=0.666 Sum_probs=251.8
Q ss_pred cCCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEe
Q 019602 19 SFPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLA 98 (338)
Q Consensus 19 s~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~ 98 (338)
+.++++||+|+|+.++.......+......++...++++.++..+||||||+|||+|+|||++|+++||+|||+++++|+
T Consensus 55 g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIAaVnG~a~GgG~~LalacD~ria~~~a~f~ 134 (342)
T PRK05617 55 GAGERGFCAGGDIRALYEAARAGDPLAADRFFREEYRLNALIARYPKPYIALMDGIVMGGGVGISAHGSHRIVTERTKMA 134 (342)
T ss_pred cCCCCceeCCcCHHHHHhhhccCCchhHHHHHHHHHHHHHHHHhCCCCEEEEEcCEEEccHhHHhhhCCEEEEcCCCEee
Confidence 43448999999999875322211111111344445567889999999999999999999999999999999999999999
Q ss_pred CCCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHHH
Q 019602 99 MPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIV 178 (338)
Q Consensus 99 ~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~ 178 (338)
+||+++|++|++|++++|++++| . .+++|++||++++ |+||+++|||++++|++++.+..+++++..+ .+..+++.
T Consensus 135 ~pe~~lGl~P~~g~~~~L~r~~g-~-~a~~llltG~~i~-A~eA~~~GLv~~vv~~~~l~~~~~~~~~~~~-~~~~~~~~ 210 (342)
T PRK05617 135 MPETGIGFFPDVGGTYFLSRAPG-A-LGTYLALTGARIS-AADALYAGLADHFVPSADLPALLDALISLRW-DSGADVVD 210 (342)
T ss_pred CCccccCcCCCccceeEehhccc-H-HHHHHHHcCCCCC-HHHHHHcCCcceecCHHHHHHHHHHHHhcCC-ccchhHHH
Confidence 99999999999999999999877 5 8999999999999 9999999999999999999888777776644 55566888
Q ss_pred HHHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHHH
Q 019602 179 ALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKV 258 (338)
Q Consensus 179 ~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~~ 258 (338)
.++++|..+..+ ..+..+..+|++||++. ++++|++.|++.. .+||.+++++|+++||.+++.+|+++++.
T Consensus 211 ~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~-~~~~~~~~l~~~~-------~~~a~~~a~~i~~~sp~a~~~~k~~l~~~ 281 (342)
T PRK05617 211 AALAAFATPAPA-SELAAQRAWIDECFAGD-TVEDIIAALEADG-------GEFAAKTADTLRSRSPTSLKVTLEQLRRA 281 (342)
T ss_pred HHHHHhccCCCc-chhHHHHHHHHHHhCCC-CHHHHHHHHHhcc-------HHHHHHHHHHHHhCCcHHHHHHHHHHHHh
Confidence 999999888554 48889999999999885 9999999999874 47999999999999999999999999988
Q ss_pred hhhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCCCCCCCCCCCCcCCCCHHHHHhhhcC
Q 019602 259 ASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEP 328 (338)
Q Consensus 259 ~~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK~r~p~w~~~~~~~v~~~~v~~~~~~ 328 (338)
. ..+++++++.|.+.+..++.++|+.||+++|+++|.|+|+|++++++||++++|+.+|+|
T Consensus 282 ~---------~~~l~~~~~~e~~~~~~~~~~~d~~egv~afl~ek~r~p~~~~~~~~~~~~~~~~~~~~~ 342 (342)
T PRK05617 282 R---------GLTLEECLRRELRLALAMLRSPDFVEGVRAVLIDKDRNPKWSPATLEDVTPEDVEAFFAP 342 (342)
T ss_pred c---------CCCHHHHHHHHHHHHHHHHhCCchhhccceEEEcCCCCCCCCCCChHhCCHHHHHHhhCC
Confidence 7 678999999999999999999999999999975554889999999999999999999998
No 6
>PLN02874 3-hydroxyisobutyryl-CoA hydrolase-like protein
Probab=100.00 E-value=1.9e-51 Score=401.03 Aligned_cols=293 Identities=31% Similarity=0.574 Sum_probs=247.6
Q ss_pred CCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeC
Q 019602 20 FPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAM 99 (338)
Q Consensus 20 ~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~ 99 (338)
..|++||+|+||+++....... .....++...+.++.+|..+||||||+|||+|+|||++|+++||+|||+++++|++
T Consensus 63 g~g~~FcaG~Dl~~~~~~~~~~--~~~~~~~~~~~~l~~~i~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~ 140 (379)
T PLN02874 63 GAGRAFSAGGDLKMFYDGRESD--DSCLEVVYRMYWLCYHIHTYKKTQVALVHGLVMGGGAGLMVPMKFRVVTEKTVFAT 140 (379)
T ss_pred CCCCCccCccCHHHHHhhcccc--hHHHHHHHHHHHHHHHHHhCCCCEEEEecCeEEecHHHHHHhCCeEEEeCCeEEec
Confidence 3568999999999875321111 11223334445567789999999999999999999999999999999999999999
Q ss_pred CCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHHHH
Q 019602 100 PENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVA 179 (338)
Q Consensus 100 pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~ 179 (338)
||+++|++|++|++++|+|++| . .+++|++||++++ |+||+++|||+++||++++.+...++.++. ..+...+..
T Consensus 141 pe~~iGl~p~~g~~~~L~rl~g-~-~a~~l~ltG~~i~-a~eA~~~GLv~~vv~~~~l~~~~~~l~~l~--~~~~~~~~~ 215 (379)
T PLN02874 141 PEASVGFHTDCGFSYILSRLPG-H-LGEYLALTGARLN-GKEMVACGLATHFVPSEKLPELEKRLLNLN--SGDESAVQE 215 (379)
T ss_pred cccccCcCCChhHHHHHHhhhH-H-HHHHHHHcCCccc-HHHHHHcCCccEEeCHHHHHHHHHHHHhcC--CCCHHHHHH
Confidence 9999999999999999999988 4 8999999999999 999999999999999999887555555442 234567888
Q ss_pred HHHhhcCCCC-CCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHHH
Q 019602 180 LLAKYSSDPE-GEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKV 258 (338)
Q Consensus 180 ~l~~~~~~~~-~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~~ 258 (338)
++..|..+.. ....+....++|.+||+.. ++.||++.|++..+..+ .+||.+++++|+++||.+++.+|+++++.
T Consensus 216 ~l~~~~~~~~~~~~~~~~~~~~i~~~f~~~-~~~eii~al~~~~~~~~---~~~A~~~a~~l~~~sP~al~~tk~~~~~~ 291 (379)
T PLN02874 216 AIEEFSKDVQADEDSILNKQSWINECFSKD-TVEEIIKAFESEASKTG---NEWIKETLKGLRRSSPTGLKITLRSIREG 291 (379)
T ss_pred HHHHhhcccCCCcchhHHHHHHHHHHhCCC-CHHHHHHHHhhcccccc---cHHHHHHHHHHHhcChHHHHHHHHHHHHh
Confidence 8988886542 3345556689999999876 99999999997543222 48999999999999999999999999988
Q ss_pred hhhcCCCccccCCHHHHHHHHHHHHhhhCC---CCCHHHHHHhhhcCCCCCCCCCCCCcCCCCHHHHHhhhcCCCCC
Q 019602 259 ASAHGKTDNELSKLSGVMKYEYRVALRSSL---RSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGTG 332 (338)
Q Consensus 259 ~~~~~~~~~~~~~l~~~l~~e~~~~~~~~~---~~d~~eg~~afl~eK~r~p~w~~~~~~~v~~~~v~~~~~~~~~~ 332 (338)
. ..+++++++.|++....++. ++||+||+++|+++|+|.|+|+++++++|++++|+.+|.|+..+
T Consensus 292 ~---------~~~l~~~l~~e~~~~~~~~~~~~~~D~~EGv~AflidK~r~P~w~~~~~~~v~~~~v~~~f~~~~~~ 359 (379)
T PLN02874 292 R---------KQSLAECLKKEFRLTMNILRSTVSDDVYEGIRALVIDKDNAPKWNPSTLDEVTDEKVDLVFQPFKAR 359 (379)
T ss_pred c---------cCCHHHHHHHHHHHHHHHHhcCcCcchhhccceEEEcCCCCCCCCCCChhhCCHHHHHHHhCCCCCc
Confidence 7 67899999999998888777 99999999999877878999999999999999999999998654
No 7
>PLN02600 enoyl-CoA hydratase
Probab=100.00 E-value=3e-42 Score=319.40 Aligned_cols=206 Identities=19% Similarity=0.280 Sum_probs=182.3
Q ss_pred ccCCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEE
Q 019602 18 SSFPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLL 97 (338)
Q Consensus 18 ~s~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f 97 (338)
++.++++||+|+|+.++... +......+......++.++..+||||||+|||+|+|||++|+++||+|||+++++|
T Consensus 46 ~g~~g~~F~aG~Dl~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lala~D~~ia~~~a~f 121 (251)
T PLN02600 46 RSSVPGVFCAGADLKERRKM----SPSEVQKFVNSLRSTFSSLEALSIPTIAVVEGAALGGGLELALSCDLRICGEEAVF 121 (251)
T ss_pred ecCCCCceeeCcCHHHHhcc----ChHHHHHHHHHHHHHHHHHHhCCCCEEEEecCeecchhHHHHHhCCEEEeeCCCEE
Confidence 35457899999999987521 11223344455566788899999999999999999999999999999999999999
Q ss_pred eCCCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHH
Q 019602 98 AMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDI 177 (338)
Q Consensus 98 ~~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~ 177 (338)
++||+++|++|++|++++|++++|++ ++++|++||++++ |+||+++||||++||++++.+.+
T Consensus 122 ~~pe~~~Gl~p~~g~~~~l~~~~G~~-~a~~l~ltg~~~~-a~eA~~~Glv~~vv~~~~~~~~a---------------- 183 (251)
T PLN02600 122 GLPETGLAIIPGAGGTQRLPRLVGRS-RAKELIFTGRRIG-AREAASMGLVNYCVPAGEAYEKA---------------- 183 (251)
T ss_pred eCcccccCcCCCchHHHHHHHHhCHH-HHHHHHHhCCccC-HHHHHHcCCCcEeeChhHHHHHH----------------
Confidence 99999999999999999999999998 9999999999999 99999999999999988876654
Q ss_pred HHHHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHH
Q 019602 178 VALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSK 257 (338)
Q Consensus 178 ~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~ 257 (338)
.++|+ +|++.||.+++.+|++++.
T Consensus 184 ----------------------------------------------------~~~a~----~la~~~p~a~~~~K~~l~~ 207 (251)
T PLN02600 184 ----------------------------------------------------LELAQ----EINQKGPLAIKMAKKAINE 207 (251)
T ss_pred ----------------------------------------------------HHHHH----HHHhCCHHHHHHHHHHHHH
Confidence 35666 9999999999999999998
Q ss_pred HhhhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCCCCCCCCCCC
Q 019602 258 VASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPA 312 (338)
Q Consensus 258 ~~~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK~r~p~w~~~ 312 (338)
.. ..++.+.+..|.+.+..++.++|++||+++|+ +| |+|.|+++
T Consensus 208 ~~---------~~~~~~~~~~e~~~~~~~~~~~d~~eg~~af~-ek-r~p~~~~~ 251 (251)
T PLN02600 208 GS---------EVDMASGLEIEEECYEQVLKTKDRLEGLAAFA-EK-RKPVYTGK 251 (251)
T ss_pred Hc---------cCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHh-cC-CCCCCCCC
Confidence 76 67899999999999999999999999999999 78 89999763
No 8
>PRK09076 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=6.6e-42 Score=318.35 Aligned_cols=204 Identities=20% Similarity=0.241 Sum_probs=179.4
Q ss_pred cCCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEe
Q 019602 19 SFPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLA 98 (338)
Q Consensus 19 s~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~ 98 (338)
+.++++||+|+||.++.. .+......+......++.+|.++||||||+|||+|+|||++|+++||+|||+++++|+
T Consensus 54 g~g~~~F~aG~Dl~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~ 129 (258)
T PRK09076 54 GDGEKFFSAGADLNLFAD----GDKAVAREMARRFGEAFEALSAFRGVSIAAINGYAMGGGLECALACDIRIAEEQAQMA 129 (258)
T ss_pred CCCCCceEeCcCHHHHhh----cChhhHHHHHHHHHHHHHHHHhCCCCEEEEECCEEecHHHHHHHhCCEEEecCCCEee
Confidence 434479999999998752 1111122333445567888999999999999999999999999999999999999999
Q ss_pred CCCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHHH
Q 019602 99 MPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIV 178 (338)
Q Consensus 99 ~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~ 178 (338)
+||+++|++|++|++++|++++|.+ ++++|+++|++++ |+||+++||||+|||++++.+.+
T Consensus 130 ~pe~~~Gl~p~~g~~~~l~~~iG~~-~a~~l~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a----------------- 190 (258)
T PRK09076 130 LPEASVGLLPCAGGTQNLPWLVGEG-WAKRMILCGERVD-AATALRIGLVEEVVEKGEAREAA----------------- 190 (258)
T ss_pred CcccccCCCCCccHHHHHHHHhCHH-HHHHHHHcCCcCC-HHHHHHCCCCceecCchhHHHHH-----------------
Confidence 9999999999999999999999998 9999999999999 99999999999999988776654
Q ss_pred HHHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHHH
Q 019602 179 ALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKV 258 (338)
Q Consensus 179 ~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~~ 258 (338)
.++|+ +|...||.+++.+|++++..
T Consensus 191 ---------------------------------------------------~~~a~----~l~~~~~~a~~~~K~~l~~~ 215 (258)
T PRK09076 191 ---------------------------------------------------LALAQ----KVANQSPSAVAACKTLIQAA 215 (258)
T ss_pred ---------------------------------------------------HHHHH----HHHhCCHHHHHHHHHHHHHH
Confidence 24666 99999999999999999987
Q ss_pred hhhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCCCCCCCCCC
Q 019602 259 ASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNP 311 (338)
Q Consensus 259 ~~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK~r~p~w~~ 311 (338)
. ..++.+.+..|...+..++.++|++||+++|+ +| |+|+|++
T Consensus 216 ~---------~~~~~~~~~~e~~~~~~~~~~~~~~eg~~af~-~k-r~p~~~~ 257 (258)
T PRK09076 216 R---------NGPRAAALALERELFVDLFDTEDQREGVNAFL-EK-RAPQWKN 257 (258)
T ss_pred h---------cCCHHHHHHHHHHHHHHHhcCchHHHHHHHHh-cC-CCCCCCC
Confidence 6 66899999999999999999999999999999 78 8999975
No 9
>PRK05980 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=6.4e-42 Score=318.72 Aligned_cols=206 Identities=19% Similarity=0.254 Sum_probs=180.0
Q ss_pred cCCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEe
Q 019602 19 SFPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLA 98 (338)
Q Consensus 19 s~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~ 98 (338)
+.++++||+|+|+.++..............++.....++.++..+||||||+|||+|+|||++|+++||+||++++++|+
T Consensus 55 g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~ria~~~a~f~ 134 (260)
T PRK05980 55 GAGDRAFSAGADIHEFSASVAAGADVALRDFVRRGQAMTARLEAFPKPVIAAVNGLAFGGGCEITEAVHLAIASERALFA 134 (260)
T ss_pred eCCCCceEcCcCHHHHhhhccccchhhHHHHHHHHHHHHHHHHhCCCCEEEEEcCEEEhhhhHHhHhCCEEEecCCCEec
Confidence 43447999999999875322111111233455555668888999999999999999999999999999999999999999
Q ss_pred CCCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHHH
Q 019602 99 MPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIV 178 (338)
Q Consensus 99 ~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~ 178 (338)
+||+++|++|++|++++|++++|.+ ++++|+++|++++ |+||+++||||++||++++.+.+.
T Consensus 135 ~pe~~~Gl~p~~g~~~~l~~~vG~~-~a~~l~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a~---------------- 196 (260)
T PRK05980 135 KPEIRLGMPPTFGGTQRLPRLAGRK-RALELLLTGDAFS-AERALEIGLVNAVVPHEELLPAAR---------------- 196 (260)
T ss_pred CcccccCCCCCchHhhHHHhhcCHH-HHHHHHHcCCccC-HHHHHHcCCCCcccCHHHHHHHHH----------------
Confidence 9999999999999999999999998 9999999999999 999999999999999887776552
Q ss_pred HHHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHHH
Q 019602 179 ALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKV 258 (338)
Q Consensus 179 ~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~~ 258 (338)
++|+ ++++.||.+++.+|++++..
T Consensus 197 ----------------------------------------------------~~a~----~la~~~p~a~~~~K~~~~~~ 220 (260)
T PRK05980 197 ----------------------------------------------------ALAR----RIIRHSPVAVAAILTAVTRG 220 (260)
T ss_pred ----------------------------------------------------HHHH----HHHhCCHHHHHHHHHHHHHH
Confidence 5666 89999999999999999987
Q ss_pred hhhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCCCCCCCC
Q 019602 259 ASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKW 309 (338)
Q Consensus 259 ~~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK~r~p~w 309 (338)
. ..++.+.+..|...+...+.++|++||+++|+ +| |+|+|
T Consensus 221 ~---------~~~~~~~~~~e~~~~~~~~~~~~~~e~~~af~-~k-r~p~~ 260 (260)
T PRK05980 221 L---------NLSIAEGLLIESEQFARMAGSADLREGLAAWI-ER-RRPAY 260 (260)
T ss_pred h---------cCCHHHHHHHHHHHHHHHhcChhHHHHHHHHh-cc-CCCCC
Confidence 7 67899999999999999999999999999999 78 88988
No 10
>PRK08150 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.2e-41 Score=316.11 Aligned_cols=203 Identities=20% Similarity=0.209 Sum_probs=179.3
Q ss_pred CCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeC
Q 019602 20 FPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAM 99 (338)
Q Consensus 20 ~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~ 99 (338)
..|++||+|+|++++... +......+......++.+|.++||||||+|||+|+|||++|+++||+|||+++++|++
T Consensus 52 g~g~~F~aG~Dl~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~ 127 (255)
T PRK08150 52 GEGDHFCAGLDLSELRER----DAGEGMHHSRRWHRVFDKIQYGRVPVIAALHGAVVGGGLELASAAHIRVADESTYFAL 127 (255)
T ss_pred CCCCceecCcCHHHHhhc----cchhHHHHHHHHHHHHHHHHhCCCCEEEEECCEEEcHHHHHHHhCCEEEEeCCCEEec
Confidence 357899999999987531 1111223334455678889999999999999999999999999999999999999999
Q ss_pred CCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHHHH
Q 019602 100 PENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVA 179 (338)
Q Consensus 100 pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~ 179 (338)
||+++|++|++|++++|++++|++ ++++|++||++++ |+||+++||||++||++++.+.+.
T Consensus 128 pe~~~Gl~p~~g~~~~l~~~iG~~-~a~~l~ltg~~~~-a~eA~~~Glv~~vv~~~~l~~~a~----------------- 188 (255)
T PRK08150 128 PEGQRGIFVGGGGSVRVPRLIGVA-RMTDMMLTGRVYD-AQEGERLGLAQYLVPAGEALDKAM----------------- 188 (255)
T ss_pred cccccCCCCCccHHHHHHHHhCHH-HHHHHHHcCCcCC-HHHHHHcCCccEeeCchHHHHHHH-----------------
Confidence 999999999999999999999998 9999999999999 999999999999999988777552
Q ss_pred HHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHHHh
Q 019602 180 LLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVA 259 (338)
Q Consensus 180 ~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~~~ 259 (338)
+||+ +|+.+||.+++.+|+.++...
T Consensus 189 ---------------------------------------------------~~a~----~la~~~~~a~~~~K~~l~~~~ 213 (255)
T PRK08150 189 ---------------------------------------------------ELAR----RIAQNAPLTNFAVLNALPRIA 213 (255)
T ss_pred ---------------------------------------------------HHHH----HHHhCCHHHHHHHHHHHHHhc
Confidence 5666 999999999999999999876
Q ss_pred hhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCCCCCCCCCC
Q 019602 260 SAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNP 311 (338)
Q Consensus 260 ~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK~r~p~w~~ 311 (338)
..++++.+..|...+..++.++|++||+++|+ +| |+|+|++
T Consensus 214 ---------~~~~~~~~~~e~~~~~~~~~s~d~~eg~~af~-~k-r~p~~~~ 254 (255)
T PRK08150 214 ---------DMSADDGLFVESLMAAVAQSAPEAKERLRAFL-EK-KAAKVKP 254 (255)
T ss_pred ---------cCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHh-cc-CCCCCCC
Confidence 67899999999998889999999999999999 78 8999975
No 11
>PRK05862 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=5.7e-42 Score=318.61 Aligned_cols=202 Identities=19% Similarity=0.211 Sum_probs=178.2
Q ss_pred CCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeC
Q 019602 20 FPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAM 99 (338)
Q Consensus 20 ~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~ 99 (338)
..|++||+|+|++++... +. ...+......++.+|..+||||||+|||+|+|||++|+++||+||++++++|++
T Consensus 56 g~g~~F~aG~Dl~~~~~~----~~--~~~~~~~~~~~~~~l~~~~kpvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~ 129 (257)
T PRK05862 56 GSEKAFAAGADIKEMADL----SF--MDVYKGDYITNWEKVARIRKPVIAAVAGYALGGGCELAMMCDIIIAADTAKFGQ 129 (257)
T ss_pred CCCCceECCcChHhHhcc----ch--hHHHHHHHHHHHHHHHhCCCCEEEEEccEEeHHHHHHHHHCCEEEEeCCCEEeC
Confidence 357899999999987521 11 111222334467789999999999999999999999999999999999999999
Q ss_pred CCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHHHH
Q 019602 100 PENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVA 179 (338)
Q Consensus 100 pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~ 179 (338)
||+++|++|++|++++|++++|+. ++++|+++|+.++ |+||+++||||+++|++++.+.+.
T Consensus 130 pe~~~Gl~p~~g~~~~l~~~vG~~-~a~~l~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a~----------------- 190 (257)
T PRK05862 130 PEIKLGVLPGMGGSQRLTRAVGKA-KAMDLCLTGRMMD-AAEAERAGLVSRVVPADKLLDEAL----------------- 190 (257)
T ss_pred chhccCcCCCccHHHHHHHHhCHH-HHHHHHHhCCccC-HHHHHHcCCCCEeeCHhHHHHHHH-----------------
Confidence 999999999999999999999998 9999999999999 999999999999999888777553
Q ss_pred HHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHHHh
Q 019602 180 LLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVA 259 (338)
Q Consensus 180 ~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~~~ 259 (338)
+|++ +|+..||.+++.+|++++...
T Consensus 191 ---------------------------------------------------~~a~----~l~~~~~~a~~~~K~~l~~~~ 215 (257)
T PRK05862 191 ---------------------------------------------------AAAT----TIASFSLPAVMMAKEAVNRAY 215 (257)
T ss_pred ---------------------------------------------------HHHH----HHHhCCHHHHHHHHHHHHHHh
Confidence 4666 899999999999999999877
Q ss_pred hhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCCCCCCCCCCC
Q 019602 260 SAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPA 312 (338)
Q Consensus 260 ~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK~r~p~w~~~ 312 (338)
..++.+++..|.+.+..++.++|++||+++|+ +| |+|.|+++
T Consensus 216 ---------~~~l~~~~~~e~~~~~~~~~s~~~~e~i~af~-~k-r~p~~~~~ 257 (257)
T PRK05862 216 ---------ETTLAEGLLFERRLFHSLFATEDQKEGMAAFV-EK-RKPVFKHR 257 (257)
T ss_pred ---------cCCHHHHHHHHHHHHHHHhcChhHHHHHHHHh-cc-CCCCCCCC
Confidence 67899999999999999999999999999999 78 89999763
No 12
>PRK07657 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.5e-41 Score=316.29 Aligned_cols=205 Identities=19% Similarity=0.244 Sum_probs=181.3
Q ss_pred cCCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEe
Q 019602 19 SFPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLA 98 (338)
Q Consensus 19 s~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~ 98 (338)
+.++++||+|+|+.++.. .+......+......++..|..+||||||+|||+|+|||++|+++||+||++++++|+
T Consensus 56 g~g~~~F~aG~Dl~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~ 131 (260)
T PRK07657 56 GAGEKAFCAGADLKERAG----MNEEQVRHAVSLIRTTMEMVEQLPQPVIAAINGIALGGGLELALACDFRIAAESASLG 131 (260)
T ss_pred cCCCCceEcCcChHhhhc----CChhhHHHHHHHHHHHHHHHHhCCCCEEEEEcCEeechHHHHHHhCCEEEeeCCCEEc
Confidence 434469999999998752 1112233444555678889999999999999999999999999999999999999999
Q ss_pred CCCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHHH
Q 019602 99 MPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIV 178 (338)
Q Consensus 99 ~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~ 178 (338)
+||+++|++|++|++++|++++|.+ ++++|+++|++++ |+||+++||||+++|++++.+.+
T Consensus 132 ~pe~~~G~~p~~g~~~~l~~~vG~~-~a~~l~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a----------------- 192 (260)
T PRK07657 132 LTETTLAIIPGAGGTQRLPRLIGVG-RAKELIYTGRRIS-AQEAKEIGLVEFVVPAHLLEEKA----------------- 192 (260)
T ss_pred CchhccCcCCCccHHHHHHHHhCHH-HHHHHHHhCCCCC-HHHHHHcCCCCeecCHHHHHHHH-----------------
Confidence 9999999999999999999999998 9999999999999 99999999999999988877655
Q ss_pred HHHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHHH
Q 019602 179 ALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKV 258 (338)
Q Consensus 179 ~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~~ 258 (338)
.+||+ +|...||.+++.+|++++..
T Consensus 193 ---------------------------------------------------~~~a~----~l~~~~~~a~~~~K~~l~~~ 217 (260)
T PRK07657 193 ---------------------------------------------------IEIAE----KIASNGPIAVRQAKEAISNG 217 (260)
T ss_pred ---------------------------------------------------HHHHH----HHHhCCHHHHHHHHHHHHHh
Confidence 35666 89999999999999999987
Q ss_pred hhhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCCCCCCCCCCC
Q 019602 259 ASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPA 312 (338)
Q Consensus 259 ~~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK~r~p~w~~~ 312 (338)
. ..++.+.+..|...+..++.++|++||+++|+ +| |+|.|+++
T Consensus 218 ~---------~~~~~~~~~~e~~~~~~~~~~~~~~e~~~af~-~~-r~~~~~~~ 260 (260)
T PRK07657 218 I---------QVDLHTGLQIEKQAYEGTIPTKDRLEGLQAFK-EK-RKPMYKGE 260 (260)
T ss_pred c---------cCCHHHHHHHHHHHHHHHhcCHhHHHHHHHHh-cC-CCCCCCCC
Confidence 7 67899999999999999999999999999999 78 89999753
No 13
>PRK06142 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1e-41 Score=319.33 Aligned_cols=206 Identities=16% Similarity=0.203 Sum_probs=178.7
Q ss_pred CCCeEEcCCChhHHhhhhc-------cCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeC
Q 019602 21 PNNAVICGQSPLNHLQSTT-------QNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTE 93 (338)
Q Consensus 21 ~~~~F~aG~Dl~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~ 93 (338)
.|++||+|+|+.++..... .........+.....+++.+|..+||||||+|||+|+|||++|+++||+|||++
T Consensus 59 ~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kpvIAav~G~a~GgG~~lalacD~~ia~~ 138 (272)
T PRK06142 59 SGKHFSYGIDLPAMAGVFGQLGKDGLARPRTDLRREILRLQAAINAVADCRKPVIAAVQGWCIGGGVDLISACDMRYASA 138 (272)
T ss_pred CCCceecccCHHHHhhhcccccccccccchHHHHHHHHHHHHHHHHHHhCCCCEEEEecCccccchHHHHHhCCEEEecC
Confidence 5789999999998753111 011112223334445678889999999999999999999999999999999999
Q ss_pred CeEEeCCCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCC-CChHHHHHHHHhcccCCC
Q 019602 94 KTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPS-GNLGSLKEALLAVTFSED 172 (338)
Q Consensus 94 ~a~f~~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~-~~l~~~~~~l~~~~~~~~ 172 (338)
+++|++||+++|++|++|++++|++++|++ ++++|+++|++++ |+||+++||||+++|+ +++.+.+
T Consensus 139 ~a~f~~pe~~~Gl~p~~g~~~~l~~~~G~~-~a~~l~l~g~~~~-a~eA~~~GLv~~vv~~~~~l~~~a----------- 205 (272)
T PRK06142 139 DAKFSVREVDLGMVADVGSLQRLPRIIGDG-HLRELALTGRDID-AAEAEKIGLVNRVYDDADALLAAA----------- 205 (272)
T ss_pred CCeecchhhhhCCCCCchHHHHHHHHhCHH-HHHHHHHhCCCcC-HHHHHHcCCccEecCCHHHHHHHH-----------
Confidence 999999999999999999999999999998 9999999999999 9999999999999996 6666644
Q ss_pred chhHHHHHHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHH
Q 019602 173 PHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQ 252 (338)
Q Consensus 173 ~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k 252 (338)
.+||+ +|...||.+++.+|
T Consensus 206 ---------------------------------------------------------~~~a~----~ia~~~~~a~~~~K 224 (272)
T PRK06142 206 ---------------------------------------------------------HATAR----EIAAKSPLAVRGTK 224 (272)
T ss_pred ---------------------------------------------------------HHHHH----HHHhCCHHHHHHHH
Confidence 35777 89999999999999
Q ss_pred HHHHHHhhhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCCCCCCCCCC
Q 019602 253 KYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNP 311 (338)
Q Consensus 253 ~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK~r~p~w~~ 311 (338)
++++... ..++.+.+..|...+..++.++|++||+++|+ +| |+|+|++
T Consensus 225 ~~l~~~~---------~~~l~~~~~~~~~~~~~~~~~~d~~egv~af~-~k-r~p~~~~ 272 (272)
T PRK06142 225 EVLDYMR---------DHRVADGLRYVATWNAAMLPSKDLTEAIAAHM-EK-RPPEFTG 272 (272)
T ss_pred HHHHHhh---------cCCHHHHHHHHHHHHHHHhcCccHHHHHHHHh-cC-CCCCCCC
Confidence 9999877 67899999999999999999999999999999 78 8999964
No 14
>PRK05809 3-hydroxybutyryl-CoA dehydratase; Validated
Probab=100.00 E-value=3.1e-41 Score=314.12 Aligned_cols=203 Identities=22% Similarity=0.252 Sum_probs=179.2
Q ss_pred CC-CeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeC
Q 019602 21 PN-NAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAM 99 (338)
Q Consensus 21 ~~-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~ 99 (338)
.| ++||+|+|+.++... +......+......++.+|..+||||||+|||+|+|||++|+++||+||++++++|++
T Consensus 57 ~g~~~F~aG~Dl~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~va~~~a~f~~ 132 (260)
T PRK05809 57 AGEKAFVAGADISEMKDL----NEEEGRKFGLLGNKVFRKLENLDKPVIAAINGFALGGGCELSMACDIRIASEKAKFGQ 132 (260)
T ss_pred CCCCceeeCcChHhHhcc----ChHHHHHHHHHHHHHHHHHHcCCCCEEEEEcCeeecHHHHHHHhCCEEEeeCCCEEeC
Confidence 34 899999999987531 1112223333445678889999999999999999999999999999999999999999
Q ss_pred CCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHHHH
Q 019602 100 PENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVA 179 (338)
Q Consensus 100 pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~ 179 (338)
||+++|++|++|++++|++++|++ ++++|+++|+.++ |+||+++||||+++|++++.+.+
T Consensus 133 pe~~~Gl~p~~g~~~~l~~~vG~~-~a~~l~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a------------------ 192 (260)
T PRK05809 133 PEVGLGITPGFGGTQRLARIVGPG-KAKELIYTGDMIN-AEEALRIGLVNKVVEPEKLMEEA------------------ 192 (260)
T ss_pred cccccCCCCCccHHHHHHHHhCHH-HHHHHHHhCCCCC-HHHHHHcCCCCcccChHHHHHHH------------------
Confidence 999999999999999999999998 9999999999999 99999999999999987776654
Q ss_pred HHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHHHh
Q 019602 180 LLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVA 259 (338)
Q Consensus 180 ~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~~~ 259 (338)
.++++ +|+..||.+++.+|++++...
T Consensus 193 --------------------------------------------------~~~a~----~la~~~~~a~~~~K~~l~~~~ 218 (260)
T PRK05809 193 --------------------------------------------------KALAN----KIAANAPIAVKLCKDAINRGM 218 (260)
T ss_pred --------------------------------------------------HHHHH----HHHhCCHHHHHHHHHHHHHHh
Confidence 35666 899999999999999999887
Q ss_pred hhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCCCCCCCCCCC
Q 019602 260 SAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPA 312 (338)
Q Consensus 260 ~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK~r~p~w~~~ 312 (338)
..++++.++.|.+.+..++.++|++||+++|+ +| |.|+|.++
T Consensus 219 ---------~~~~~~~~~~e~~~~~~~~~~~~~~egi~af~-~~-r~p~~~~~ 260 (260)
T PRK05809 219 ---------QVDIDTAVAIEAEDFGECFSTEDQTEGMTAFV-EK-REKNFKNK 260 (260)
T ss_pred ---------cCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHh-cC-CCCCCCCC
Confidence 67899999999999999999999999999999 78 89999753
No 15
>PRK07658 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=3.9e-41 Score=312.91 Aligned_cols=204 Identities=20% Similarity=0.237 Sum_probs=180.1
Q ss_pred CCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeC
Q 019602 20 FPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAM 99 (338)
Q Consensus 20 ~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~ 99 (338)
..|++||+|+|+.++... .. ......+......++.+|..+||||||+|||+|+|||++|+++||+||++++++|++
T Consensus 53 g~g~~F~aG~Dl~~~~~~-~~--~~~~~~~~~~~~~~~~~l~~~~kpvIAav~G~a~GgG~~lalacD~ria~~~a~f~~ 129 (257)
T PRK07658 53 GEGRFFSAGADIKEFTSV-TE--AEQATELAQLGQVTFERVEKFSKPVIAAIHGAALGGGLELAMSCHIRFATESAKLGL 129 (257)
T ss_pred CCCCceEeCcCHHHHhcc-Cc--hhhHHHHHHHHHHHHHHHHhCCCCEEEEEcCeeeeHHHHHHHhCCEEEecCCCcccC
Confidence 357899999999987531 11 112223444455688899999999999999999999999999999999999999999
Q ss_pred CCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHHHH
Q 019602 100 PENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVA 179 (338)
Q Consensus 100 pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~ 179 (338)
||+++|++|++|++++|++++|.. ++++|+++|++++ |+||+++||||+++|++++.+.+.
T Consensus 130 pe~~~Gl~p~~g~~~~l~~~vG~~-~a~~l~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a~----------------- 190 (257)
T PRK07658 130 PELNLGLIPGFAGTQRLPRYVGKA-KALEMMLTSEPIT-GAEALKWGLVNGVFPEETLLDDAK----------------- 190 (257)
T ss_pred cccccCCCCCCcHHHHHHHHhCHH-HHHHHHHcCCCcC-HHHHHHcCCcCeecChhHHHHHHH-----------------
Confidence 999999999999999999999998 9999999999999 999999999999999888776542
Q ss_pred HHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHHHh
Q 019602 180 LLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVA 259 (338)
Q Consensus 180 ~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~~~ 259 (338)
++|+ +|.+.||.+++.+|++++...
T Consensus 191 ---------------------------------------------------~~a~----~l~~~~~~a~~~~K~~l~~~~ 215 (257)
T PRK07658 191 ---------------------------------------------------KLAK----KIAGKSPATTRAVLELLQTTK 215 (257)
T ss_pred ---------------------------------------------------HHHH----HHHhCCHHHHHHHHHHHHHHh
Confidence 4666 899999999999999999876
Q ss_pred hhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCCCCCCCCCC
Q 019602 260 SAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNP 311 (338)
Q Consensus 260 ~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK~r~p~w~~ 311 (338)
..++++.++.|...+..++.++|++||+++|+ +| |+|+|++
T Consensus 216 ---------~~~~~~~~~~e~~~~~~~~~~~~~~egi~af~-~k-r~p~~~~ 256 (257)
T PRK07658 216 ---------SSSYYEGVKREAKIFGEVFTSEDAKEGVQAFL-EK-RKPSFSG 256 (257)
T ss_pred ---------cCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHH-cC-CCCCCCC
Confidence 66899999999999999999999999999999 68 8999975
No 16
>PRK08258 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=3.7e-41 Score=316.41 Aligned_cols=207 Identities=18% Similarity=0.205 Sum_probs=180.3
Q ss_pred CCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeC
Q 019602 20 FPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAM 99 (338)
Q Consensus 20 ~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~ 99 (338)
..|++||+|+|+.++.......+......+......++.+|.++||||||+|||+|+|||++|+++||+|||+++++|++
T Consensus 69 g~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~ 148 (277)
T PRK08258 69 GAGGNFCSGGDVHEIIGPLTKMDMPELLAFTRMTGDLVKAMRACPQPIIAAVDGVCAGAGAILAMASDLRLGTPSAKTAF 148 (277)
T ss_pred CCCCCcccccCHHHHhccccccChhHHHHHHHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEecCCCEEec
Confidence 35789999999998743211112222333444445688899999999999999999999999999999999999999999
Q ss_pred CCCCcCcCC-CchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHHH
Q 019602 100 PENGIGLFP-DVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIV 178 (338)
Q Consensus 100 pe~~lGl~P-~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~ 178 (338)
||+++|++| ++|++++|++++|.. ++++|+++|++++ |+||+++||||+++|++++.+.+
T Consensus 149 pe~~~Gl~p~~~g~~~~l~~~vG~~-~a~~l~ltg~~~~-a~eA~~~Glv~~vv~~~~l~~~a----------------- 209 (277)
T PRK08258 149 LFTRVGLAGADMGACALLPRIIGQG-RASELLYTGRSMS-AEEGERWGFFNRLVEPEELLAEA----------------- 209 (277)
T ss_pred cccccCcCCCCchHHHHHHHHhCHH-HHHHHHHcCCCCC-HHHHHHcCCCcEecCHHHHHHHH-----------------
Confidence 999999995 789999999999998 9999999999999 99999999999999987776654
Q ss_pred HHHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHHH
Q 019602 179 ALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKV 258 (338)
Q Consensus 179 ~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~~ 258 (338)
.++|+ +|+..||.+++.+|++++..
T Consensus 210 ---------------------------------------------------~~~a~----~la~~~~~a~~~~K~~l~~~ 234 (277)
T PRK08258 210 ---------------------------------------------------QALAR----RLAAGPTFAHGMTKTMLHQE 234 (277)
T ss_pred ---------------------------------------------------HHHHH----HHHhCCHHHHHHHHHHHHhh
Confidence 35677 99999999999999999987
Q ss_pred hhhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCCCCCCCCCC
Q 019602 259 ASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNP 311 (338)
Q Consensus 259 ~~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK~r~p~w~~ 311 (338)
. ..++++.+..|...+..++.++|++||+++|+ +| |+|+|++
T Consensus 235 ~---------~~~l~~~~~~e~~~~~~~~~s~d~~eg~~af~-ek-r~p~~~~ 276 (277)
T PRK08258 235 W---------DMGLEEAIEAEAQAQAICMQTEDFRRAYEAFV-AK-RKPVFEG 276 (277)
T ss_pred c---------cCCHHHHHHHHHHHHHHHhcCchHHHHHHHHh-cC-CCCCCCC
Confidence 6 67899999999999999999999999999999 78 8999975
No 17
>TIGR02280 PaaB1 phenylacetate degradation probable enoyl-CoA hydratase paaB. This family of proteins are found within apparent operons for the degradation of phenylacetic acid. These proteins contain the enoyl-CoA hydratase domain as detected by pfam00378. This activity is consistent with current hypotheses for the degradation pathway which involve the ligation of phenylacetate with coenzyme A (paaF), hydroxylation (paaGHIJK), ring-opening (paaN) and degradation of the resulting fatty acid-like compound to a Krebs cycle intermediate (paaABCDE).
Probab=100.00 E-value=3.9e-41 Score=312.82 Aligned_cols=206 Identities=21% Similarity=0.229 Sum_probs=178.2
Q ss_pred CCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeC
Q 019602 20 FPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAM 99 (338)
Q Consensus 20 ~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~ 99 (338)
..|++||+|+|++++.... ....+....+......++.++..+||||||+|||+|+|||++|+++||+|||+++++|++
T Consensus 50 g~g~~F~aG~Dl~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~ria~~~a~f~~ 128 (256)
T TIGR02280 50 GAGRGFCAGQDLSERNPTP-GGAPDLGRTIETFYNPLVRRLRALPLPVVCAVNGVAAGAGANLALACDIVLAAESARFIQ 128 (256)
T ss_pred CCCCCcccCcCHHHHhhcc-ccchhHHHHHHHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEecCCCEEeC
Confidence 3568999999999875311 111111111212223467789999999999999999999999999999999999999999
Q ss_pred CCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHHHH
Q 019602 100 PENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVA 179 (338)
Q Consensus 100 pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~ 179 (338)
||+++|++|++|++++|++++|+. ++++|+++|++++ |+||+++|||++++|++++.+.+
T Consensus 129 pe~~lG~~p~~g~~~~l~~~vG~~-~a~~l~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a------------------ 188 (256)
T TIGR02280 129 AFAKIGLIPDSGGTWSLPRLVGRA-RAMGLAMLGEKLD-ARTAASWGLIWQVVDDAALMDEA------------------ 188 (256)
T ss_pred hhhhcCCCCCccHHHHHHHHhCHH-HHHHHHHcCCCCC-HHHHHHcCCcceeeChHHHHHHH------------------
Confidence 999999999999999999999998 9999999999999 99999999999999988877655
Q ss_pred HHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHHHh
Q 019602 180 LLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVA 259 (338)
Q Consensus 180 ~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~~~ 259 (338)
.+||+ +|+..||.+++.+|++++...
T Consensus 189 --------------------------------------------------~~~a~----~la~~~~~~~~~~K~~l~~~~ 214 (256)
T TIGR02280 189 --------------------------------------------------QALAV----HLAAQPTRGLALTKRAIQAAA 214 (256)
T ss_pred --------------------------------------------------HHHHH----HHHhCCHHHHHHHHHHHHhhh
Confidence 35677 999999999999999999877
Q ss_pred hhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCCCCCCCCCC
Q 019602 260 SAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNP 311 (338)
Q Consensus 260 ~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK~r~p~w~~ 311 (338)
..++.+.++.|...+..++.++|++||+++|+ +| |+|+|++
T Consensus 215 ---------~~~~~~~~~~e~~~~~~~~~~~d~~eg~~af~-~k-r~p~~~~ 255 (256)
T TIGR02280 215 ---------TNSLDTQLDLERDLQRELGRSADYAEGVTAFL-DK-RNPQFTG 255 (256)
T ss_pred ---------cCCHHHHHHHHHHHHHHHhcChhHHHHHHHHH-cC-CCCCCCC
Confidence 67799999999999999999999999999999 78 8999975
No 18
>PRK06127 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4.6e-41 Score=314.51 Aligned_cols=207 Identities=19% Similarity=0.234 Sum_probs=181.3
Q ss_pred cCCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEe
Q 019602 19 SFPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLA 98 (338)
Q Consensus 19 s~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~ 98 (338)
+.++++||+|+|+..+.... .+.+....+......++.+|..+||||||+|||+|+|||++|+++||+|||+++++|+
T Consensus 63 g~g~~~FcaG~Dl~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~kPvIaav~G~a~GgG~~LalacD~~ia~~~a~f~ 140 (269)
T PRK06127 63 GAGEKAFVSGADISQFEESR--SDAEAVAAYEQAVEAAQAALADYAKPTIACIRGYCIGGGMGIALACDIRIAAEDSRFG 140 (269)
T ss_pred eCCCCceecCcCHHHHhhcc--cchHHHHHHHHHHHHHHHHHHhCCCCEEEEECCEEecHHHHHHHhCCEEEeeCCCEee
Confidence 43447999999999875321 1112223344445567888999999999999999999999999999999999999999
Q ss_pred CCCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHHH
Q 019602 99 MPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIV 178 (338)
Q Consensus 99 ~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~ 178 (338)
+||+++|++|++|++++|++++|++ ++++|++||+.++ |+||+++||||+|||++++.+.+
T Consensus 141 ~pe~~~Gl~p~~g~~~~l~~~vG~~-~a~~l~ltg~~~~-a~eA~~~Glv~~vv~~~~l~~~a----------------- 201 (269)
T PRK06127 141 IPAARLGLGYGYDGVKNLVDLVGPS-AAKDLFYTARRFD-AAEALRIGLVHRVTAADDLETAL----------------- 201 (269)
T ss_pred CchhhhCCCCCccHHHHHHHHhCHH-HHHHHHHcCCCCC-HHHHHHcCCCCEeeCHHHHHHHH-----------------
Confidence 9999999999999999999999998 9999999999999 99999999999999988877655
Q ss_pred HHHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHHH
Q 019602 179 ALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKV 258 (338)
Q Consensus 179 ~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~~ 258 (338)
.+||+ +++..||.+++.+|++++..
T Consensus 202 ---------------------------------------------------~~~a~----~l~~~~~~a~~~~K~~l~~~ 226 (269)
T PRK06127 202 ---------------------------------------------------ADYAA----TIAGNAPLTLRAAKRAIAEL 226 (269)
T ss_pred ---------------------------------------------------HHHHH----HHHhCCHHHHHHHHHHHHHh
Confidence 35777 89999999999999999987
Q ss_pred hhhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCCCCCCCCCCC
Q 019602 259 ASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPA 312 (338)
Q Consensus 259 ~~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK~r~p~w~~~ 312 (338)
. ..++++.++.|...+..++.++|++||+++|+ +| |+|.|+++
T Consensus 227 ~---------~~~~~~~~~~e~~~~~~~~~~~d~~e~~~af~-ek-r~p~~~~~ 269 (269)
T PRK06127 227 L---------KDEPERDMAACQALVAACFDSEDYREGRAAFM-EK-RKPVFKGR 269 (269)
T ss_pred c---------cCCHHHHHHHHHHHHHHHhcChHHHHHHHHHh-cC-CCCCCCCC
Confidence 7 67899999999999999999999999999999 78 89999763
No 19
>PRK09245 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.3e-41 Score=316.01 Aligned_cols=208 Identities=19% Similarity=0.240 Sum_probs=179.4
Q ss_pred CCCCeEEcCCChhHHhhhhcc--CChHHH-HHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeE
Q 019602 20 FPNNAVICGQSPLNHLQSTTQ--NQLSEM-IEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTL 96 (338)
Q Consensus 20 ~~~~~F~aG~Dl~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~ 96 (338)
..|++||+|+||.++...... .+.... ..+......++.++..+||||||+|||+|+|||++|+++||+|||+++++
T Consensus 56 g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kpvIaav~G~a~GgG~~lalacD~ria~~~a~ 135 (266)
T PRK09245 56 GAGTAFSSGGNVKDMRARVGAFGGSPADIRQGYRHGIQRIPLALYNLEVPVIAAVNGPAIGAGCDLACMCDIRIASETAR 135 (266)
T ss_pred CCCCCcccCcCHHHHhhccccccccchhHHHHHHHHHHHHHHHHHcCCCCEEEEECCEeecHHHHHHHhCCEEEecCCCE
Confidence 367899999999987532110 111111 12223345677889999999999999999999999999999999999999
Q ss_pred EeCCCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhH
Q 019602 97 LAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQD 176 (338)
Q Consensus 97 f~~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~ 176 (338)
|++||+++|++|++|+++++++++|.+ ++++|+++|++++ |+||+++||||+++|++++.+.+
T Consensus 136 f~~pe~~~G~~p~~g~~~~l~~~vG~~-~a~~l~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a--------------- 198 (266)
T PRK09245 136 FAESFVKLGLIPGDGGAWLLPRIIGMA-RAAEMAFTGDAID-AATALEWGLVSRVVPADQLLPAA--------------- 198 (266)
T ss_pred EcccccccCcCCCcchhhhHHHHhhHH-HHHHHHHcCCCcC-HHHHHHcCCcceecCHHHHHHHH---------------
Confidence 999999999999999999999999998 9999999999999 99999999999999988877655
Q ss_pred HHHHHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHH
Q 019602 177 IVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFS 256 (338)
Q Consensus 177 ~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~ 256 (338)
.+|++ +|+..||.+++.+|++++
T Consensus 199 -----------------------------------------------------~~~a~----~l~~~~~~a~~~~K~~l~ 221 (266)
T PRK09245 199 -----------------------------------------------------RALAE----RIAANPPHALRLTKRLLR 221 (266)
T ss_pred -----------------------------------------------------HHHHH----HHHhCCHHHHHHHHHHHH
Confidence 35666 999999999999999999
Q ss_pred HHhhhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCCCCCCCCCCC
Q 019602 257 KVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPA 312 (338)
Q Consensus 257 ~~~~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK~r~p~w~~~ 312 (338)
... ..++++.+..|...+..++.++|++||+++|+ +| |+|.|.++
T Consensus 222 ~~~---------~~~~~~~~~~e~~~~~~~~~~~d~~eg~~af~-~k-r~p~~~~~ 266 (266)
T PRK09245 222 EGQ---------HASLDTLLELSAAYQALAHHTADHREAVDAFL-EK-RPPVFTGR 266 (266)
T ss_pred Hhh---------cCCHHHHHHHHHHHHHHHhcCHhHHHHHHHHH-cC-CCCCCCCC
Confidence 876 66799999999999999999999999999999 78 89999753
No 20
>PRK07799 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.8e-41 Score=315.00 Aligned_cols=206 Identities=18% Similarity=0.189 Sum_probs=175.2
Q ss_pred CCCCeEEcCCChhHHhhhhccCChHHHHHH-HHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEe
Q 019602 20 FPNNAVICGQSPLNHLQSTTQNQLSEMIEV-FTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLA 98 (338)
Q Consensus 20 ~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~ 98 (338)
..|++||+|+|+.++.... ..+......+ ...... +.++..+||||||+|||+|+|||++|+++||+|||+++++|+
T Consensus 57 g~g~~F~aG~Dl~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~kpvIaav~G~a~GgG~~lalacD~ria~~~a~f~ 134 (263)
T PRK07799 57 GAGGAFCAGMDLKAATKKP-PGDSFKDGSYDPSRIDA-LLKGRRLTKPLIAAVEGPAIAGGTEILQGTDIRVAGESAKFG 134 (263)
T ss_pred CCCCccccccCHHHHhhcc-ccchhhhhhhhhhHHHH-HHHHhcCCCCEEEEECCeEeccHHHHHHhCCEEEecCCCEec
Confidence 3568999999999876321 1110000001 111122 335789999999999999999999999999999999999999
Q ss_pred CCCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHHH
Q 019602 99 MPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIV 178 (338)
Q Consensus 99 ~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~ 178 (338)
+||+++|++|++|++++|++++|++ ++++|++||++++ |+||+++||||++||++++.+.+
T Consensus 135 ~pe~~~Gl~p~~g~~~~l~r~vG~~-~a~~l~ltg~~~~-a~eA~~~Glv~~vv~~~~l~~~a----------------- 195 (263)
T PRK07799 135 ISEAKWSLFPMGGSAVRLVRQIPYT-VACDLLLTGRHIT-AAEAKEIGLIGHVVPDGQALDKA----------------- 195 (263)
T ss_pred CcccccCcCCCccHHHHHHHHhCHH-HHHHHHHcCCCCC-HHHHHHcCCccEecCcchHHHHH-----------------
Confidence 9999999999999999999999998 9999999999999 99999999999999998876654
Q ss_pred HHHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHHH
Q 019602 179 ALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKV 258 (338)
Q Consensus 179 ~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~~ 258 (338)
.++++ ++.+.||.+++.+|++++..
T Consensus 196 ---------------------------------------------------~~~a~----~~~~~~~~a~~~~K~~l~~~ 220 (263)
T PRK07799 196 ---------------------------------------------------LELAE----LINANGPLAVQAILRTIRET 220 (263)
T ss_pred ---------------------------------------------------HHHHH----HHHhcChHHHHHHHHHHHHh
Confidence 24666 89999999999999999987
Q ss_pred hhhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCCCCCCCCCCC
Q 019602 259 ASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPA 312 (338)
Q Consensus 259 ~~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK~r~p~w~~~ 312 (338)
. ..++.+.++.|.+.+..++.++|+++|+++|+ +| |+|+|.++
T Consensus 221 ~---------~~~l~~~~~~e~~~~~~~~~~~~~~egi~af~-~~-r~p~~~~~ 263 (263)
T PRK07799 221 E---------GMHENEAFKIDTKIGIPVFLSEDAKEGPRAFA-EK-RAPNFQGR 263 (263)
T ss_pred h---------cCCHHHHHHHHHHHHHHHhcCccHHHHHHHHH-cc-CCCCCCCC
Confidence 7 67899999999999999999999999999999 68 89999864
No 21
>PLN02664 enoyl-CoA hydratase/delta3,5-delta2,4-dienoyl-CoA isomerase
Probab=100.00 E-value=6.8e-41 Score=314.30 Aligned_cols=208 Identities=20% Similarity=0.220 Sum_probs=178.4
Q ss_pred cCCCCeEEcCCChhHHhhhhcc---CC----hHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEE
Q 019602 19 SFPNNAVICGQSPLNHLQSTTQ---NQ----LSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIV 91 (338)
Q Consensus 19 s~~~~~F~aG~Dl~~~~~~~~~---~~----~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~ria 91 (338)
+..|++||+|+|+.++...... .+ ......+......++..|..+||||||+|||+|+|||++|+++||+|||
T Consensus 59 tg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia 138 (275)
T PLN02664 59 SGAGDHFCSGIDLKTLNSISEQSSSGDRGRSGERLRRKIKFLQDAITAIEQCRKPVIAAIHGACIGGGVDIVTACDIRYC 138 (275)
T ss_pred ECCCCceeeCcChHHhhhcccccccccchhhHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCccccchHHHHHhCCEEEe
Confidence 3467899999999987532110 01 0112223333456778899999999999999999999999999999999
Q ss_pred eCCeEEeCCCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCC-CChHHHHHHHHhcccC
Q 019602 92 TEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPS-GNLGSLKEALLAVTFS 170 (338)
Q Consensus 92 s~~a~f~~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~-~~l~~~~~~l~~~~~~ 170 (338)
+++++|++||+++|++|++|++++|++++|.+ ++++|++||++++ |+||+++||||++||+ +++.+.+
T Consensus 139 ~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~-~A~~l~ltg~~~~-a~eA~~~GLv~~vv~~~~~l~~~~--------- 207 (275)
T PLN02664 139 SEDAFFSVKEVDLAITADLGTLQRLPSIVGYG-NAMELALTGRRFS-GSEAKELGLVSRVFGSKEDLDEGV--------- 207 (275)
T ss_pred cCCCEeccHHHhhCCCCCccHHHHHHHHhCHH-HHHHHHHhCCCCC-HHHHHHcCCCceeeCChhHHHHHH---------
Confidence 99999999999999999999999999999998 9999999999999 9999999999999995 6666544
Q ss_pred CCchhHHHHHHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHH
Q 019602 171 EDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCL 250 (338)
Q Consensus 171 ~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~ 250 (338)
.++|+ +|+..||.+++.
T Consensus 208 -----------------------------------------------------------~~~a~----~ia~~~p~a~~~ 224 (275)
T PLN02664 208 -----------------------------------------------------------RLIAE----GIAAKSPLAVTG 224 (275)
T ss_pred -----------------------------------------------------------HHHHH----HHHhCCHHHHHH
Confidence 24666 999999999999
Q ss_pred HHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCCCCCCCCCC
Q 019602 251 TQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNP 311 (338)
Q Consensus 251 ~k~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK~r~p~w~~ 311 (338)
+|++++... ..++.+.++.|...+..++.++|++||+++|+ +| |+|.|.+
T Consensus 225 ~K~~l~~~~---------~~~~~~~~~~e~~~~~~~~~~~d~~eg~~af~-ek-r~p~~~~ 274 (275)
T PLN02664 225 TKAVLLRSR---------ELSVEQGLDYVATWNSAMLVSDDLNEAVSAQI-QK-RKPVFAK 274 (275)
T ss_pred HHHHHHHHh---------cCCHHHHHHHHHHHHHHhccChhHHHHHHHHh-cc-CCCCCCC
Confidence 999999876 67899999999999999999999999999999 78 8999975
No 22
>PRK09674 enoyl-CoA hydratase-isomerase; Provisional
Probab=100.00 E-value=2.5e-41 Score=313.96 Aligned_cols=201 Identities=19% Similarity=0.276 Sum_probs=177.5
Q ss_pred CCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeC
Q 019602 20 FPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAM 99 (338)
Q Consensus 20 ~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~ 99 (338)
..|++||+|+|++++... +.. ..+......++.++..+||||||+|||+|+|||++|+++||+|||+++++|++
T Consensus 54 g~g~~F~aG~Dl~~~~~~----~~~--~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~ 127 (255)
T PRK09674 54 GNARFFAAGADLNEMAEK----DLA--ATLNDPRPQLWQRLQAFNKPLIAAVNGYALGAGCELALLCDIVIAGENARFGL 127 (255)
T ss_pred CCCCceecccChHhHhcc----chh--hhHHHHHHHHHHHHHhCCCCEEEEECCEeehHHHHHHHhCCEEEecCCCEEeC
Confidence 357899999999987521 111 11222334577889999999999999999999999999999999999999999
Q ss_pred CCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHHHH
Q 019602 100 PENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVA 179 (338)
Q Consensus 100 pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~ 179 (338)
||+++|++|++|++++|++++|++ ++++++++|+.++ |+||+++||||++||++++.+.+
T Consensus 128 pe~~~Gl~p~~g~~~~l~~~ig~~-~a~~l~l~g~~~~-a~eA~~~Glv~~vv~~~~~~~~a------------------ 187 (255)
T PRK09674 128 PEITLGIMPGAGGTQRLIRSVGKS-LASQMVLTGESIT-AQQAQQAGLVSEVFPPELTLERA------------------ 187 (255)
T ss_pred chhhcCCCCCccHHHHHHHHhCHH-HHHHHHHcCCccC-HHHHHHcCCCcEecChHHHHHHH------------------
Confidence 999999999999999999999998 9999999999999 99999999999999988776654
Q ss_pred HHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHHHh
Q 019602 180 LLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVA 259 (338)
Q Consensus 180 ~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~~~ 259 (338)
.+||+ +|+..||.+++.+|++++...
T Consensus 188 --------------------------------------------------~~~a~----~l~~~~~~a~~~~K~~l~~~~ 213 (255)
T PRK09674 188 --------------------------------------------------LQLAS----KIARHSPLALRAAKQALRQSQ 213 (255)
T ss_pred --------------------------------------------------HHHHH----HHHhCCHHHHHHHHHHHHHhh
Confidence 35666 999999999999999999877
Q ss_pred hhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCCCCCCCCCC
Q 019602 260 SAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNP 311 (338)
Q Consensus 260 ~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK~r~p~w~~ 311 (338)
..++.+.++.|.+.+..++.++|++||+++|+ +| |+|.|.+
T Consensus 214 ---------~~~~~~~~~~e~~~~~~~~~~~~~~e~i~af~-~k-r~p~~~~ 254 (255)
T PRK09674 214 ---------EVDLQAGLAQERQLFTLLAATEDRHEGISAFL-EK-RTPDFKG 254 (255)
T ss_pred ---------cCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHh-cc-CCCCCCC
Confidence 67899999999999999999999999999999 68 8999975
No 23
>PRK08140 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=6.9e-41 Score=312.12 Aligned_cols=207 Identities=20% Similarity=0.224 Sum_probs=177.8
Q ss_pred CCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeC
Q 019602 20 FPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAM 99 (338)
Q Consensus 20 ~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~ 99 (338)
..|++||+|+|+.++..............+......++.++..+||||||+|||+|+|||++|+++||+|||+++++|++
T Consensus 55 g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~ 134 (262)
T PRK08140 55 GAGRGFCAGQDLADRDVTPGGAMPDLGESIETFYNPLVRRLRALPLPVIAAVNGVAAGAGANLALACDIVLAARSASFIQ 134 (262)
T ss_pred CCCCCcccCcChHHHhccccccchhhHHHHHHHHHHHHHHHHhCCCCEEEEECCeeehhHHHHHHhCCEEEecCCCEEec
Confidence 35789999999998742110111111111212233477889999999999999999999999999999999999999999
Q ss_pred CCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHHHH
Q 019602 100 PENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVA 179 (338)
Q Consensus 100 pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~ 179 (338)
||+++|++|++|++++|++++|.+ ++++|+++|++++ |+||+++||||+|+|++++.+.+
T Consensus 135 pe~~~G~~p~~g~~~~l~~~vG~~-~a~~l~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a------------------ 194 (262)
T PRK08140 135 AFVKIGLVPDSGGTWFLPRLVGMA-RALGLALLGEKLS-AEQAEQWGLIWRVVDDAALADEA------------------ 194 (262)
T ss_pred cccccCCCCCccHHHHHHHHhCHH-HHHHHHHcCCCcC-HHHHHHcCCccEeeChHHHHHHH------------------
Confidence 999999999999999999999998 9999999999999 99999999999999988877654
Q ss_pred HHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHHHh
Q 019602 180 LLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVA 259 (338)
Q Consensus 180 ~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~~~ 259 (338)
.++|+ +|+..||.+++.+|++++...
T Consensus 195 --------------------------------------------------~~~a~----~ia~~~~~a~~~~K~~l~~~~ 220 (262)
T PRK08140 195 --------------------------------------------------QQLAA----HLATQPTRGLALIKQAMNASA 220 (262)
T ss_pred --------------------------------------------------HHHHH----HHHhCCHHHHHHHHHHHHHhh
Confidence 35677 999999999999999999877
Q ss_pred hhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCCCCCCCCCC
Q 019602 260 SAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNP 311 (338)
Q Consensus 260 ~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK~r~p~w~~ 311 (338)
..++.+++..|...+..++.++|++||+++|+ +| |+|.|.+
T Consensus 221 ---------~~~~~~~~~~e~~~~~~~~~~~~~~e~~~af~-~k-r~p~~~~ 261 (262)
T PRK08140 221 ---------TNTLDAQLDLERDLQREAGRSADYAEGVSAFL-EK-RAPRFTG 261 (262)
T ss_pred ---------hCCHHHHHHHHHHHHHHHhcChhHHHHHHHHh-cC-CCCCCCC
Confidence 67899999999999999999999999999999 78 8999975
No 24
>PRK08139 enoyl-CoA hydratase; Validated
Probab=100.00 E-value=4.7e-41 Score=313.95 Aligned_cols=205 Identities=20% Similarity=0.272 Sum_probs=179.3
Q ss_pred cCCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEe
Q 019602 19 SFPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLA 98 (338)
Q Consensus 19 s~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~ 98 (338)
+..|++||+|+|+.++... .+.+....++....+++.+|..+||||||+|||+|+|||++|+++||+|||+++++|+
T Consensus 62 tg~g~~F~aG~Dl~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~ 138 (266)
T PRK08139 62 AAAGKAFCAGHDLKEMRAA---RGLAYFRALFARCSRVMQAIVALPQPVIARVHGIATAAGCQLVASCDLAVAADTARFA 138 (266)
T ss_pred ecCCCcceeccCHHHHhcc---cchhHHHHHHHHHHHHHHHHHhCCCCEEEEECceeeHHHHHHHHhCCEEEEeCCCEEe
Confidence 3457899999999987521 1112223444555678889999999999999999999999999999999999999999
Q ss_pred CCCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHHH
Q 019602 99 MPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIV 178 (338)
Q Consensus 99 ~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~ 178 (338)
+||+++|++|+++ +++|++++|.. ++++|++||++++ |+||+++||||+|+|++++.+.+
T Consensus 139 ~pe~~~Gl~p~~~-~~~l~r~vG~~-~A~~l~ltg~~~~-a~eA~~~GLv~~vv~~~~l~~~a----------------- 198 (266)
T PRK08139 139 VPGVNIGLFCSTP-MVALSRNVPRK-QAMEMLLTGEFID-AATAREWGLVNRVVPADALDAAV----------------- 198 (266)
T ss_pred CcccCcCCCCCcc-HHHHHHHhCHH-HHHHHHHcCCccC-HHHHHHcCCccEeeChhHHHHHH-----------------
Confidence 9999999999876 46899999998 9999999999999 99999999999999988877755
Q ss_pred HHHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHHH
Q 019602 179 ALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKV 258 (338)
Q Consensus 179 ~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~~ 258 (338)
.+||+ +|+..||.+++.+|++++..
T Consensus 199 ---------------------------------------------------~~~a~----~la~~~~~a~~~~K~~l~~~ 223 (266)
T PRK08139 199 ---------------------------------------------------ARLAA----VIAAKSPAAVRIGKEAFYRQ 223 (266)
T ss_pred ---------------------------------------------------HHHHH----HHHhCCHHHHHHHHHHHHHh
Confidence 35666 99999999999999999988
Q ss_pred hhhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCCCCCCCCCCC
Q 019602 259 ASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPA 312 (338)
Q Consensus 259 ~~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK~r~p~w~~~ 312 (338)
. ..++++.+..|...+..++.++|++||+++|+ +| |+|+|.++
T Consensus 224 ~---------~~~~~~~~~~e~~~~~~~~~~~d~~eg~~af~-~k-r~p~~~~~ 266 (266)
T PRK08139 224 A---------EMPLADAYAYAGDVMAENMMAEDAEEGIDAFL-EK-RPPEWRGR 266 (266)
T ss_pred c---------cCCHHHHHHHHHHHHHHHhcCchHHHHHHHHh-cC-CCCCCCCC
Confidence 7 67899999999999999999999999999999 78 89999753
No 25
>PRK08138 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4.5e-41 Score=313.26 Aligned_cols=201 Identities=18% Similarity=0.222 Sum_probs=178.2
Q ss_pred CCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeC
Q 019602 20 FPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAM 99 (338)
Q Consensus 20 ~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~ 99 (338)
..|++||+|+|+.++... .. ...+......++..+..+||||||+|||+|+|||++|+++||+|||+++++|++
T Consensus 60 g~g~~F~aG~Dl~~~~~~---~~---~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~ 133 (261)
T PRK08138 60 GGEKVFAAGADIKEFATA---GA---IEMYLRHTERYWEAIAQCPKPVIAAVNGYALGGGCELAMHADIIVAGESASFGQ 133 (261)
T ss_pred CCCCCeeCCcCHHHHhcc---ch---hHHHHHHHHHHHHHHHhCCCCEEEEEccEEEcHHHHHHHhCCEEEecCCCEeeC
Confidence 357899999999987521 11 112333445678889999999999999999999999999999999999999999
Q ss_pred CCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHHHH
Q 019602 100 PENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVA 179 (338)
Q Consensus 100 pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~ 179 (338)
||+++|++|++|++++|++++|+. ++++|+++|++++ |+||+++||||+++|++++.+.+.
T Consensus 134 pe~~~Gl~p~~g~~~~l~~~vG~~-~a~~l~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a~----------------- 194 (261)
T PRK08138 134 PEIKVGLMPGAGGTQRLVRAVGKF-KAMRMALTGCMVP-APEALAIGLVSEVVEDEQTLPRAL----------------- 194 (261)
T ss_pred cccccccCCCCcHHHHHHHHhCHH-HHHHHHHcCCCCC-HHHHHHCCCCcEecCchHHHHHHH-----------------
Confidence 999999999999999999999998 9999999999999 999999999999999888776542
Q ss_pred HHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHHHh
Q 019602 180 LLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVA 259 (338)
Q Consensus 180 ~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~~~ 259 (338)
+||+ ++.+.||.+++.+|++++...
T Consensus 195 ---------------------------------------------------~~a~----~l~~~~~~a~~~~K~~l~~~~ 219 (261)
T PRK08138 195 ---------------------------------------------------ELAR----EIARMPPLALAQIKEVVLAGA 219 (261)
T ss_pred ---------------------------------------------------HHHH----HHHhCCHHHHHHHHHHHHHHh
Confidence 4666 888999999999999999877
Q ss_pred hhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCCCCCCCCCC
Q 019602 260 SAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNP 311 (338)
Q Consensus 260 ~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK~r~p~w~~ 311 (338)
..++++.+..|.+.+..++.++|+++|+++|+ +| |+|+|.+
T Consensus 220 ---------~~~~~~~~~~e~~~~~~~~~~~~~~~~i~af~-~k-r~~~~~~ 260 (261)
T PRK08138 220 ---------DAPLDAALALERKAFQLLFDSEDQKEGMDAFL-EK-RKPAYKG 260 (261)
T ss_pred ---------cCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHh-cC-CCCCCCC
Confidence 67899999999999999999999999999999 78 8999975
No 26
>PRK06563 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.9e-41 Score=313.52 Aligned_cols=203 Identities=16% Similarity=0.154 Sum_probs=175.0
Q ss_pred CCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHH-HHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEe
Q 019602 20 FPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYS-LICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLA 98 (338)
Q Consensus 20 ~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~ 98 (338)
..|++||+|+|++++....... ...+...... +...+..+||||||+|||+|+|||++|+++||+|||+++++|+
T Consensus 51 g~g~~F~aG~Dl~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lal~cD~ria~~~a~f~ 126 (255)
T PRK06563 51 AHGEHFTAGLDLADVAPKLAAG----GFPFPEGGIDPWGTVGRRLSKPLVVAVQGYCLTLGIELMLAADIVVAADNTRFA 126 (255)
T ss_pred CCCCCCcCCcCHHHHhhccccc----hhhhhhhhhHHHHHHHhcCCCCEEEEEcCeeecHHHHHHHhCCEEEecCCCEEe
Confidence 3678999999999875321111 1112111122 2335889999999999999999999999999999999999999
Q ss_pred CCCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHHH
Q 019602 99 MPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIV 178 (338)
Q Consensus 99 ~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~ 178 (338)
+||+++|++|++|++++|++++|++ ++++|++||++++ |+||+++||||+++|++++.+.+
T Consensus 127 ~pe~~~Gl~p~~g~~~~l~~~vG~~-~a~~l~ltg~~~~-a~eA~~~Glv~~vv~~~~l~~~a----------------- 187 (255)
T PRK06563 127 QLEVQRGILPFGGATLRFPQAAGWG-NAMRYLLTGDEFD-AQEALRLGLVQEVVPPGEQLERA----------------- 187 (255)
T ss_pred ChhhhcCCCCCccHHHHHHHHhhHH-HHHHHHHcCCCcC-HHHHHHcCCCcEeeCHHHHHHHH-----------------
Confidence 9999999999999999999999998 9999999999999 99999999999999988776654
Q ss_pred HHHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHHH
Q 019602 179 ALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKV 258 (338)
Q Consensus 179 ~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~~ 258 (338)
.+||+ +|++.||.+++.+|++++..
T Consensus 188 ---------------------------------------------------~~~a~----~la~~~~~a~~~~K~~~~~~ 212 (255)
T PRK06563 188 ---------------------------------------------------IELAE----RIARAAPLGVQATLASARAA 212 (255)
T ss_pred ---------------------------------------------------HHHHH----HHHhcCHHHHHHHHHHHHHh
Confidence 35676 89999999999999999987
Q ss_pred hhhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCCCCCCCCCC
Q 019602 259 ASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNP 311 (338)
Q Consensus 259 ~~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK~r~p~w~~ 311 (338)
. ..++.++++.|...+..++.++|++||+++|+ +| |+|.|++
T Consensus 213 ~---------~~~~~~~~~~e~~~~~~~~~~~d~~eg~~af~-~k-r~p~~~~ 254 (255)
T PRK06563 213 V---------REGEAAAAAQLPPELRPLFTSEDAKEGVQAFL-ER-RPARFKG 254 (255)
T ss_pred h---------cCCHHHHHHHHHHHHHHHhcCchHHHHHHHHh-cC-CCCCCCC
Confidence 6 67899999999999999999999999999999 78 8999975
No 27
>PRK07659 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4.7e-41 Score=312.96 Aligned_cols=205 Identities=24% Similarity=0.304 Sum_probs=180.3
Q ss_pred cCCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEe
Q 019602 19 SFPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLA 98 (338)
Q Consensus 19 s~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~ 98 (338)
+..|++||+|+|+.++... .+......++....+++.++..+||||||+|||+|+|||++|+++||+|||+++++|+
T Consensus 56 ~g~g~~F~aG~Dl~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~pvIaav~G~a~GgG~~lalacD~ria~~~a~f~ 132 (260)
T PRK07659 56 RGNGRGFSAGGDIKMMLSS---NDESKFDGVMNTISEIVVTLYTMPKLTISAIHGPAAGLGLSIALTADYVIADISAKLA 132 (260)
T ss_pred ECCCCCcccccCHHHHhhc---cCchhHHHHHHHHHHHHHHHHhCCCCEEEEecCceecHHHHHHHhCCEEEEcCCCEEc
Confidence 3467899999999987531 1112233445556678889999999999999999999999999999999999999999
Q ss_pred CCCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHHH
Q 019602 99 MPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIV 178 (338)
Q Consensus 99 ~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~ 178 (338)
+||+++|++|++|++++|++++|+. ++++|+++|+.++ |+||+++||||++| ++++.+.+
T Consensus 133 ~pe~~~Gl~p~~g~~~~L~~~vg~~-~a~~l~ltg~~~~-a~eA~~~Glv~~vv-~~~~~~~a----------------- 192 (260)
T PRK07659 133 MNFIGIGLIPDGGGHFFLQKRVGEN-KAKQIIWEGKKLS-ATEALDLGLIDEVI-GGDFQTAA----------------- 192 (260)
T ss_pred CchhhcCCCCCCchhhhHHHhcCHH-HHHHHHHhCCccC-HHHHHHcCChHHHh-hhHHHHHH-----------------
Confidence 9999999999999999999999998 9999999999999 99999999999999 67776654
Q ss_pred HHHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHHH
Q 019602 179 ALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKV 258 (338)
Q Consensus 179 ~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~~ 258 (338)
.++++ +|++.||.+++.+|++++..
T Consensus 193 ---------------------------------------------------~~~a~----~l~~~~~~a~~~~K~~l~~~ 217 (260)
T PRK07659 193 ---------------------------------------------------KQKIS----EWLQKPLKAMIETKQIYCEL 217 (260)
T ss_pred ---------------------------------------------------HHHHH----HHHhCCHHHHHHHHHHHHhh
Confidence 24666 89999999999999999987
Q ss_pred hhhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCCCCCCCCCCC
Q 019602 259 ASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPA 312 (338)
Q Consensus 259 ~~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK~r~p~w~~~ 312 (338)
. ..++++.++.|...+...+.++|++||+.+|+ +| |+|+|.++
T Consensus 218 ~---------~~~l~~~~~~e~~~~~~~~~~~~~~egi~af~-~k-r~p~~~~~ 260 (260)
T PRK07659 218 N---------RSQLEQVLQLEKRAQYAMRQTADHKEGIRAFL-EK-RLPVFKGE 260 (260)
T ss_pred h---------cCCHHHHHHHHHHHHHHHhcCHhHHHHHHHHh-cC-CCCCCCCC
Confidence 6 67899999999999999999999999999999 78 89999753
No 28
>KOG1680 consensus Enoyl-CoA hydratase [Lipid transport and metabolism]
Probab=100.00 E-value=6.5e-42 Score=310.64 Aligned_cols=219 Identities=19% Similarity=0.236 Sum_probs=188.2
Q ss_pred ccceeeeecccc-ccccc----cCCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccc
Q 019602 2 VKFKITIFHICF-DSNIS----SFPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTM 76 (338)
Q Consensus 2 ~~~~~~~~~~~~-d~~~~----s~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~ 76 (338)
++.+.++|..+. |+... .+.|++||+|.||.++.......- ....+ .+.+..+.+.+||+||+|||+|+
T Consensus 66 m~eL~~A~~~~e~D~s~~viVltG~gksFcsG~Dl~e~~~~~~~~~---~~~~~---~~~~~~~~~~~KPvIaainG~Al 139 (290)
T KOG1680|consen 66 MLELAEAFKDFESDDSVGVIVLTGSGKSFCSGADLKEMKKDEFQDV---SDGIF---LRVWDLVSRLKKPVIAAINGFAL 139 (290)
T ss_pred HHHHHHHHHHhhccCcccEEEEEcCCCccccccCHHHHhhcccccc---ccccc---cchhhhhhhcccceeEeeeceee
Confidence 455677777776 55442 446799999999999874221110 01111 12344455899999999999999
Q ss_pred hhhhHhhhcCCeEEEeCCeEEeCCCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCC
Q 019602 77 GFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGN 156 (338)
Q Consensus 77 GgG~~Lal~cD~rias~~a~f~~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~ 156 (338)
|||++|++.||+|||+++|+|++|+.++|++|.||++.+|+|.+|.+ +|+++++||++++ |+||.++||||+|+|.++
T Consensus 140 gGG~ELalmCDirva~~~Akfg~~~~~~Gi~p~~GGT~rl~r~vG~s-~Ale~~ltg~~~~-AqeA~~~GlVn~Vvp~~~ 217 (290)
T KOG1680|consen 140 GGGLELALMCDIRVAGEGAKFGFFEIRMGIIPSWGGTQRLPRIVGKS-RALEMILTGRRLG-AQEAKKIGLVNKVVPSGD 217 (290)
T ss_pred ccchhhhhhcceEeccCCCeecccccccCCccCCCchhhHHHHhChH-HHHHHHHhcCccc-HHHHHhCCceeEeecchh
Confidence 99999999999999999999999999999999999999999999998 9999999999999 999999999999999999
Q ss_pred hHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHH
Q 019602 157 LGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEA 236 (338)
Q Consensus 157 l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~ 236 (338)
+...+ .+|++
T Consensus 218 ~l~eA--------------------------------------------------------------------v~l~~-- 227 (290)
T KOG1680|consen 218 ALGEA--------------------------------------------------------------------VKLAE-- 227 (290)
T ss_pred HHHHH--------------------------------------------------------------------HHHHH--
Confidence 66544 36888
Q ss_pred HHHHhccCchHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCCCCCCCCCC
Q 019602 237 LQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNP 311 (338)
Q Consensus 237 ~~~l~~~sp~al~~~k~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK~r~p~w~~ 311 (338)
+|+++||..+++.|+.++.+. ..++.+++..|...+...+..+|..||+.+|. +| |.|+|+.
T Consensus 228 --~Ia~~~~~~v~~~K~svn~~~---------e~~l~e~l~~e~~~~~s~~~~~d~~Eg~~~f~-~k-r~~~~~k 289 (290)
T KOG1680|consen 228 --QIAKNSPLVVRADKESVNAAY---------ETTLFEGLELERDLFGSTFATEDRLEGMTAFA-EK-RKPKFSK 289 (290)
T ss_pred --HHHhCCHHHHHHHHHHHHHHh---------hccHHHHHHhhhhhhhhhhhhHHHHHHHHHhc-cc-CCccccc
Confidence 999999999999999999977 78999999999999999999999999999998 78 8999985
No 29
>PRK06494 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2e-40 Score=308.63 Aligned_cols=203 Identities=21% Similarity=0.302 Sum_probs=172.6
Q ss_pred ccCCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEE
Q 019602 18 SSFPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLL 97 (338)
Q Consensus 18 ~s~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f 97 (338)
++.++++||+|+|+.++..... . .... .....+ ..+..+||||||+|||+|+|||++|+++||+|||+++++|
T Consensus 55 ~g~g~~~F~aG~Dl~~~~~~~~-~--~~~~---~~~~~~-~~~~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f 127 (259)
T PRK06494 55 TGAGDKAFSAGNDLKEQAAGGK-R--GWPE---SGFGGL-TSRFDLDKPIIAAVNGVAMGGGFELALACDLIVAAENATF 127 (259)
T ss_pred EcCCCCceeccccHHhHhhcCc-c--hhhh---HHHHHH-HHHhcCCCCEEEEECCEEecHHHHHHHhCCEEEEeCCCEE
Confidence 3434479999999998753111 1 0011 111222 3456899999999999999999999999999999999999
Q ss_pred eCCCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHH
Q 019602 98 AMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDI 177 (338)
Q Consensus 98 ~~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~ 177 (338)
++||+++|++|++|++++|++++|++ ++++|++||+.++ |+||+++||||+++|++++.+.+
T Consensus 128 ~~pe~~~Gl~p~~g~~~~l~~~vg~~-~a~~lll~g~~~~-a~eA~~~GLv~~vv~~~~l~~~a---------------- 189 (259)
T PRK06494 128 ALPEPRVGLAALAGGLHRLPRQIGLK-RAMGMILTGRRVT-AREGLELGFVNEVVPAGELLAAA---------------- 189 (259)
T ss_pred eCcccccCCCCCchHHHHHHHHcCHH-HHHHHHHcCCcCC-HHHHHHcCCCcEecCHhHHHHHH----------------
Confidence 99999999999999999999999998 9999999999999 99999999999999988877755
Q ss_pred HHHHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHH
Q 019602 178 VALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSK 257 (338)
Q Consensus 178 ~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~ 257 (338)
.+||+ +|+..||.+++.+|++++.
T Consensus 190 ----------------------------------------------------~~~a~----~la~~~~~a~~~~K~~l~~ 213 (259)
T PRK06494 190 ----------------------------------------------------ERWAD----DILACSPLSIRASKQAVYR 213 (259)
T ss_pred ----------------------------------------------------HHHHH----HHHhcCHHHHHHHHHHHHH
Confidence 35777 8999999999999999998
Q ss_pred HhhhcCCCccccCCHHHHHHHH--HHHHhhhCCCCCHHHHHHhhhcCCCCCCCCCCC
Q 019602 258 VASAHGKTDNELSKLSGVMKYE--YRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPA 312 (338)
Q Consensus 258 ~~~~~~~~~~~~~~l~~~l~~e--~~~~~~~~~~~d~~eg~~afl~eK~r~p~w~~~ 312 (338)
.. ..++++.++.| ...+..++.++|++||+++|+ +| |+|+|+++
T Consensus 214 ~~---------~~~~~~~~~~e~~~~~~~~~~~~~d~~eg~~af~-~k-r~p~~~~~ 259 (259)
T PRK06494 214 GL---------EVSLEEAITAQRDYPAVEARRASQDYIEGPKAFA-EK-RPPRWKGR 259 (259)
T ss_pred hc---------cCCHHHHHHHHHHHHHHHHHhcCccHHHHHHHHH-cc-CCCCCCCC
Confidence 76 67899999999 567788999999999999999 78 89999753
No 30
>PRK05981 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.7e-40 Score=310.19 Aligned_cols=206 Identities=18% Similarity=0.259 Sum_probs=179.4
Q ss_pred CCCeEEcCCChhHHhhhhccC--ChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEe
Q 019602 21 PNNAVICGQSPLNHLQSTTQN--QLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLA 98 (338)
Q Consensus 21 ~~~~F~aG~Dl~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~ 98 (338)
.|++||+|+|++++....... .......+......++.+|..+||||||+|||+|+|||++|+++||+|||+++++|+
T Consensus 58 ~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kpvIaav~G~a~GgG~~lalacD~~ia~~~a~f~ 137 (266)
T PRK05981 58 AGRGFCTGANLQGRGSGGRESDSGGDAGAALETAYHPFLRRLRNLPCPIVTAVNGPAAGVGMSFALMGDLILCARSAYFL 137 (266)
T ss_pred CCCCcccccCHHhhhcccccccccchhHHHHHHHHHHHHHHHHhCCCCEEEEECCEeehHHHHHHHhCCEEEecCCCEEe
Confidence 568999999999875321111 001122233445568889999999999999999999999999999999999999999
Q ss_pred CCCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHHH
Q 019602 99 MPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIV 178 (338)
Q Consensus 99 ~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~ 178 (338)
+||+++|++|++|++++|++++|+. .+++|+++|++++ |+||+++|||++++|++++.+.+
T Consensus 138 ~~e~~lG~~p~~g~~~~l~~~vg~~-~a~~l~l~g~~~~-a~eA~~~Glv~~vv~~~~~~~~a----------------- 198 (266)
T PRK05981 138 QAFRRIGLVPDGGSTWLLPRLVGKA-RAMELSLLGEKLP-AETALQWGLVNRVVDDAELMAEA----------------- 198 (266)
T ss_pred chHhhcCCCCCccHHHHHHHHhHHH-HHHHHHHhCCCcC-HHHHHHcCCceEeeCHhHHHHHH-----------------
Confidence 9999999999999999999999998 9999999999999 99999999999999988877654
Q ss_pred HHHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHHH
Q 019602 179 ALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKV 258 (338)
Q Consensus 179 ~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~~ 258 (338)
.+||+ +++..||.+++.+|++++..
T Consensus 199 ---------------------------------------------------~~~a~----~l~~~~~~a~~~~K~~~~~~ 223 (266)
T PRK05981 199 ---------------------------------------------------MKLAH----ELANGPTVALGLIRKLYWDS 223 (266)
T ss_pred ---------------------------------------------------HHHHH----HHHcCCHHHHHHHHHHHHHh
Confidence 35677 89999999999999999887
Q ss_pred hhhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCCCCCCCCCC
Q 019602 259 ASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNP 311 (338)
Q Consensus 259 ~~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK~r~p~w~~ 311 (338)
. ..++.+.++.|...+..++.++|++||+++|+ +| |+|.|++
T Consensus 224 ~---------~~~~~~~~~~e~~~~~~~~~s~d~~e~~~af~-~k-r~~~~~~ 265 (266)
T PRK05981 224 P---------ENDFEEQLNLEREAQRIAGKTEDFKEGVGAFL-QK-RPAQFKG 265 (266)
T ss_pred h---------hcCHHHHHHHHHHHHHHHhcChhHHHHHHHHh-cC-CCCCCCC
Confidence 6 67899999999999999999999999999999 78 8999975
No 31
>PRK03580 carnitinyl-CoA dehydratase; Provisional
Probab=100.00 E-value=2.3e-40 Score=308.50 Aligned_cols=203 Identities=19% Similarity=0.298 Sum_probs=175.1
Q ss_pred cCCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEe
Q 019602 19 SFPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLA 98 (338)
Q Consensus 19 s~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~ 98 (338)
+.++++||+|+|+.++.... ..+ ..+.......+.++..+||||||+|||+|+|||++|+++||+|||+++++|+
T Consensus 54 g~g~~~F~aG~Dl~~~~~~~-~~~----~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~ 128 (261)
T PRK03580 54 GAGEKFFSAGWDLKAAAEGE-APD----ADFGPGGFAGLTEIFDLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFA 128 (261)
T ss_pred eCCCCceecccCHHHHhccC-cch----hhhhhhhhHHHHHHHhCCCCEEEEECCeeehHHHHHHHHCCEEEecCCCEEe
Confidence 44448999999999875311 111 1121222345678999999999999999999999999999999999999999
Q ss_pred CCCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHHH
Q 019602 99 MPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIV 178 (338)
Q Consensus 99 ~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~ 178 (338)
+||+++|++|++|++++|++++|++ ++++++++|++++ |+||+++|||++++|++++.+.+
T Consensus 129 ~pe~~~G~~p~~g~~~~l~~~vg~~-~a~~l~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a----------------- 189 (261)
T PRK03580 129 LPEAKLGIVPDSGGVLRLPKRLPPA-IANEMVMTGRRMD-AEEALRWGIVNRVVPQAELMDRA----------------- 189 (261)
T ss_pred CcccccCcCCCccHHHHHHHHhCHH-HHHHHHHhCCccC-HHHHHHcCCCcEecCHhHHHHHH-----------------
Confidence 9999999999999999999999998 9999999999999 99999999999999988877755
Q ss_pred HHHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHHH
Q 019602 179 ALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKV 258 (338)
Q Consensus 179 ~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~~ 258 (338)
.+||+ +|+..||.+++.+|++++..
T Consensus 190 ---------------------------------------------------~~~a~----~la~~~~~a~~~~K~~l~~~ 214 (261)
T PRK03580 190 ---------------------------------------------------RELAQ----QLVNSAPLAIAALKEIYRET 214 (261)
T ss_pred ---------------------------------------------------HHHHH----HHHhCCHHHHHHHHHHHHHH
Confidence 35677 89999999999999999987
Q ss_pred hhhcCCCccccCCHHHHHHHHHH----HHhhhCCCCCHHHHHHhhhcCCCCCCCCCC
Q 019602 259 ASAHGKTDNELSKLSGVMKYEYR----VALRSSLRSDFAEGVRAVLVDKDQNPKWNP 311 (338)
Q Consensus 259 ~~~~~~~~~~~~~l~~~l~~e~~----~~~~~~~~~d~~eg~~afl~eK~r~p~w~~ 311 (338)
. ..++++.++.|.. .+..++.++|++||+++|+ +| |+|.|.+
T Consensus 215 ~---------~~~~~~~~~~e~~~~~~~~~~~~~~~d~~e~~~af~-ek-r~~~~~~ 260 (261)
T PRK03580 215 S---------EMPVEEAYRYIRSGVLKHYPSVLHSEDALEGPRAFA-EK-RDPVWKG 260 (261)
T ss_pred h---------cCCHHHHHHHHHhhhHHHHHHHhcCccHHHHHHHHh-cC-CCCCCCC
Confidence 6 6789999998864 6777899999999999999 78 8999975
No 32
>PRK07468 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1e-40 Score=311.09 Aligned_cols=205 Identities=18% Similarity=0.221 Sum_probs=174.4
Q ss_pred CCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeC
Q 019602 20 FPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAM 99 (338)
Q Consensus 20 ~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~ 99 (338)
..|++||+|+|++++....... .............++..|..+||||||+|||+|+|||++|+++||+|||+++++|++
T Consensus 57 g~g~~F~aG~Dl~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~ria~~~a~f~~ 135 (262)
T PRK07468 57 GAGKSFCAGGDLGWMRAQMTAD-RATRIEEARRLAMMLKALNDLPKPLIGRIQGQAFGGGVGLISVCDVAIAVSGARFGL 135 (262)
T ss_pred CCCCcccCCcCHHHHHhhcccc-hhhHHHHHHHHHHHHHHHHcCCCCEEEEECCEEEhHHHHHHHhCCEEEEeCCCEEeC
Confidence 3578999999999875322111 111112233445678889999999999999999999999999999999999999999
Q ss_pred CCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHHHH
Q 019602 100 PENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVA 179 (338)
Q Consensus 100 pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~ 179 (338)
||+++|++|++|+++++++ +|.+ ++++|++||++++ |+||+++||||+++|.+++.+.+
T Consensus 136 pe~~~Gl~p~~g~~~~~~~-vG~~-~a~~lll~g~~~~-a~eA~~~Glv~~v~~~~~l~~~~------------------ 194 (262)
T PRK07468 136 TETRLGLIPATISPYVVAR-MGEA-NARRVFMSARLFD-AEEAVRLGLLSRVVPAERLDAAV------------------ 194 (262)
T ss_pred chhccCCCcccchhhHHhh-ccHH-HHHHHHHhCCccC-HHHHHHcCCcceecCHHHHHHHH------------------
Confidence 9999999999999986654 8998 9999999999999 99999999999999987776654
Q ss_pred HHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHHHh
Q 019602 180 LLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVA 259 (338)
Q Consensus 180 ~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~~~ 259 (338)
.++|+ ++++.||.+++.+|++++...
T Consensus 195 --------------------------------------------------~~~a~----~l~~~~~~a~~~~K~~l~~~~ 220 (262)
T PRK07468 195 --------------------------------------------------EAEVT----PYLSCAPGAVAAAKALVRALG 220 (262)
T ss_pred --------------------------------------------------HHHHH----HHHhcCHHHHHHHHHHHHhhh
Confidence 24666 899999999999999998765
Q ss_pred hhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCCCCCCCCCC
Q 019602 260 SAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNP 311 (338)
Q Consensus 260 ~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK~r~p~w~~ 311 (338)
...+++.++.|...+..++.++|++||+++|+ +| |+|+|.+
T Consensus 221 ---------~~~~~~~~~~e~~~~~~~~~s~d~~e~~~af~-~k-r~~~~~~ 261 (262)
T PRK07468 221 ---------APIDEAVIDATIEALADTWETEEAREGIAAFF-DK-RAPAWRG 261 (262)
T ss_pred ---------ccChHHHHHHHHHHHHHHhcCHHHHHHHHHHH-cC-CCCCCCC
Confidence 55688999999999999999999999999999 78 8999964
No 33
>PRK05995 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=8.8e-41 Score=311.40 Aligned_cols=206 Identities=17% Similarity=0.215 Sum_probs=175.5
Q ss_pred CCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeC
Q 019602 20 FPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAM 99 (338)
Q Consensus 20 ~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~ 99 (338)
..|++||+|+|+.++........ ............++.+|.++||||||+|||+|+|||++|+++||+|||+++++|++
T Consensus 56 g~g~~F~aG~Dl~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~ 134 (262)
T PRK05995 56 GAGKAFCAGADLNWMKKMAGYSD-DENRADARRLADMLRAIYRCPKPVIARVHGDAYAGGMGLVAACDIAVAADHAVFCL 134 (262)
T ss_pred CCCCccccCcCHHHHhhhcccCc-hhhhhHHHHHHHHHHHHHcCCCCEEEEECCEEEhhHHHHHHhCCEEEeeCCCEEeC
Confidence 35689999999998753211111 11112223445678889999999999999999999999999999999999999999
Q ss_pred CCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHHHH
Q 019602 100 PENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVA 179 (338)
Q Consensus 100 pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~ 179 (338)
||+++|++|++|++ ++++++|++ ++++|+++|++++ |+||+++||||+|+|++++.+.+.
T Consensus 135 pe~~~Gl~p~~g~~-~l~~~vg~~-~a~~l~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a~----------------- 194 (262)
T PRK05995 135 SEVRLGLIPATISP-YVIRAMGER-AARRYFLTAERFD-AAEALRLGLVHEVVPAEALDAKVD----------------- 194 (262)
T ss_pred cccccccCccchHH-HHHHHhCHH-HHHHHHHcCCccC-HHHHHHcCCCCeecCHHHHHHHHH-----------------
Confidence 99999999998876 588999998 9999999999999 999999999999999888777553
Q ss_pred HHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHHHh
Q 019602 180 LLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVA 259 (338)
Q Consensus 180 ~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~~~ 259 (338)
++|+ +|+..||.+++.+|++++...
T Consensus 195 ---------------------------------------------------~~a~----~la~~~~~a~~~~K~~l~~~~ 219 (262)
T PRK05995 195 ---------------------------------------------------ELLA----ALVANSPQAVRAGKRLVRDVA 219 (262)
T ss_pred ---------------------------------------------------HHHH----HHHhCCHHHHHHHHHHHHhhh
Confidence 5666 899999999999999999876
Q ss_pred hhcCCCccccCCHHHH-HHHHHHHHhhhCCCCCHHHHHHhhhcCCCCCCCCCCC
Q 019602 260 SAHGKTDNELSKLSGV-MKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPA 312 (338)
Q Consensus 260 ~~~~~~~~~~~~l~~~-l~~e~~~~~~~~~~~d~~eg~~afl~eK~r~p~w~~~ 312 (338)
..++.+. ++.|...+..++.++|++||+++|+ +| |+|.|.++
T Consensus 220 ---------~~~~~~~~~~~e~~~~~~~~~~~d~~e~~~af~-~k-r~p~~~~~ 262 (262)
T PRK05995 220 ---------GRPIDAALIADTASRIALIRATEEAREGVAAFL-EK-RKPAWRGR 262 (262)
T ss_pred ---------cCChhhHHHHHHHHHHHHHhcCHHHHHHHHHHh-cC-CCCCCCCC
Confidence 5678888 8888888888999999999999999 78 89999864
No 34
>PRK08252 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.3e-40 Score=308.97 Aligned_cols=200 Identities=15% Similarity=0.150 Sum_probs=172.2
Q ss_pred CCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeC
Q 019602 20 FPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAM 99 (338)
Q Consensus 20 ~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~ 99 (338)
..|++||+|+|++++... ..... .......+. ...+||||||+|||+|+|||++|+++||+|||+++++|++
T Consensus 55 g~g~~F~aG~Dl~~~~~~---~~~~~---~~~~~~~~~--~~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~ 126 (254)
T PRK08252 55 GAGGTFCAGMDLKAFARG---ERPSI---PGRGFGGLT--ERPPRKPLIAAVEGYALAGGFELALACDLIVAARDAKFGL 126 (254)
T ss_pred CCCCceEcCcCHHHHhcc---cchhh---hHHHHHHHH--HhcCCCCEEEEECCEEehHHHHHHHhCCEEEEeCCCEEeC
Confidence 357899999999987631 11111 111111222 2479999999999999999999999999999999999999
Q ss_pred CCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHHHH
Q 019602 100 PENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVA 179 (338)
Q Consensus 100 pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~ 179 (338)
||+++|++|++|++++|++++|.+ ++++|+++|++++ |+||+++||||+|||++++.+.+
T Consensus 127 pe~~~Gl~p~~g~~~~l~~~vg~~-~a~~l~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a------------------ 186 (254)
T PRK08252 127 PEVKRGLVAAGGGLLRLPRRIPYH-IAMELALTGDMLT-AERAHELGLVNRLTEPGQALDAA------------------ 186 (254)
T ss_pred chhhcCCCCCchHHHHHHHHcCHH-HHHHHHHcCCccC-HHHHHHcCCcceecCcchHHHHH------------------
Confidence 999999999999999999999998 9999999999999 99999999999999988876654
Q ss_pred HHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHHHh
Q 019602 180 LLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVA 259 (338)
Q Consensus 180 ~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~~~ 259 (338)
.++++ +|+..||.+++.+|++++...
T Consensus 187 --------------------------------------------------~~~a~----~l~~~~~~a~~~~K~~l~~~~ 212 (254)
T PRK08252 187 --------------------------------------------------LELAE----RIAANGPLAVAASKRIVVESG 212 (254)
T ss_pred --------------------------------------------------HHHHH----HHHhCCHHHHHHHHHHHHHhh
Confidence 24666 899999999999999999876
Q ss_pred hhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCCCCCCCCCCC
Q 019602 260 SAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPA 312 (338)
Q Consensus 260 ~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK~r~p~w~~~ 312 (338)
..++.+.++.|...+..++.++|++||+++|+ +| |+|.|.++
T Consensus 213 ---------~~~l~~~~~~e~~~~~~~~~~~~~~eg~~af~-~k-r~p~~~~~ 254 (254)
T PRK08252 213 ---------DWSEDEMFARQRELIAPVFTSADAKEGATAFA-EK-RAPVWTGK 254 (254)
T ss_pred ---------cCCHHHHHHHHHHHHHHHhcCchHHHHHHHHh-cC-CCCCCCCC
Confidence 66899999999999999999999999999999 78 89999753
No 35
>PRK07511 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2e-40 Score=308.74 Aligned_cols=204 Identities=20% Similarity=0.255 Sum_probs=179.9
Q ss_pred CCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeCC
Q 019602 21 PNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMP 100 (338)
Q Consensus 21 ~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~p 100 (338)
.|++||+|+|+.++..... ........++...+.++..+.++||||||+|||+|+|||++|+++||+||++++++|++|
T Consensus 56 ~g~~F~~G~Dl~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~kpvIAav~G~a~GgG~~lala~D~~ia~~~a~f~~p 134 (260)
T PRK07511 56 AGGFFCAGGNLNRLLENRA-KPPSVQAASIDGLHDWIRAIRAFPKPVIAAVEGAAAGAGFSLALACDLLVAARDAKFVMA 134 (260)
T ss_pred CCCCcccCcCHHHHhhccc-ccchhHHHHHHHHHHHHHHHHcCCCCEEEEECCeeehHHHHHHHhCCEEEeeCCCEEecc
Confidence 5789999999998753211 111223344555667888999999999999999999999999999999999999999999
Q ss_pred CCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHHHHH
Q 019602 101 ENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVAL 180 (338)
Q Consensus 101 e~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~ 180 (338)
|+++|++|++|++++|++++|++ ++++|++||++++ |+||+++||||++||++++.+.+
T Consensus 135 e~~~Gl~p~~g~~~~l~~~vg~~-~a~~l~ltg~~~~-a~eA~~~Glv~~vv~~~~~~~~a------------------- 193 (260)
T PRK07511 135 YVKVGLTPDGGGSWFLARALPRQ-LATELLLEGKPIS-AERLHALGVVNRLAEPGQALAEA------------------- 193 (260)
T ss_pred ccccCcCCCchHHHHHHHHhCHH-HHHHHHHhCCCCC-HHHHHHcCCccEeeCchHHHHHH-------------------
Confidence 99999999999999999999998 9999999999999 99999999999999988776654
Q ss_pred HHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHHHhh
Q 019602 181 LAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVAS 260 (338)
Q Consensus 181 l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~~~~ 260 (338)
.+||+ ++.+.||.+++.+|+.++...
T Consensus 194 -------------------------------------------------~~~a~----~l~~~~~~~~~~~K~~l~~~~- 219 (260)
T PRK07511 194 -------------------------------------------------LALAD----QLAAGSPNALARIKSLIADAP- 219 (260)
T ss_pred -------------------------------------------------HHHHH----HHHhCCHHHHHHHHHHHHhhh-
Confidence 24666 899999999999999999877
Q ss_pred hcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCCCCCCCCC
Q 019602 261 AHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWN 310 (338)
Q Consensus 261 ~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK~r~p~w~ 310 (338)
..++.+.+..|...+..++.++|+++|+++|+ +| |+|.|.
T Consensus 220 --------~~~~~~~~~~e~~~~~~~~~~~~~~~~i~~f~-~~-r~~~~~ 259 (260)
T PRK07511 220 --------EATLAAQLEAERDHFVASLHHADALEGIAAFL-EK-RAPDYK 259 (260)
T ss_pred --------cCCHHHHHHHHHHHHHHHhcCchHHHHHHHHh-cc-CCCCCC
Confidence 67899999999999999999999999999999 68 889995
No 36
>PRK06143 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=8e-40 Score=304.03 Aligned_cols=196 Identities=18% Similarity=0.214 Sum_probs=172.6
Q ss_pred cCCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEe
Q 019602 19 SFPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLA 98 (338)
Q Consensus 19 s~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~ 98 (338)
+.++++||+|+|+.++... +......+......++.+|.++||||||+|||+|+|||++|+++||+|||+++++|+
T Consensus 59 g~g~~~F~aG~Dl~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~ 134 (256)
T PRK06143 59 GAGEKAFIGGADIKEMATL----DQASAEAFISRLRDLCDAVRHFPVPVIARIPGWCLGGGLELAAACDLRIAAHDAQFG 134 (256)
T ss_pred eCCCCcccCCcCHHHHhhc----ChhhHHHHHHHHHHHHHHHHhCCCCEEEEECCEEeehhHHHHHhCCEEEecCCCEEe
Confidence 4344799999999987521 112233444555678889999999999999999999999999999999999999999
Q ss_pred CCCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHHH
Q 019602 99 MPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIV 178 (338)
Q Consensus 99 ~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~ 178 (338)
+||+++|+ |++|++++|++++|+. ++++++++|+.++ |+||+++||||++||++++.+.+
T Consensus 135 ~pe~~~G~-p~~~~~~~l~~~iG~~-~a~~l~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a----------------- 194 (256)
T PRK06143 135 MPEVRVGI-PSVIHAALLPRLIGWA-RTRWLLLTGETID-AAQALAWGLVDRVVPLAELDAAV----------------- 194 (256)
T ss_pred CCccccCC-CCccHHHHHHHhcCHH-HHHHHHHcCCcCC-HHHHHHCCCcCeecCHHHHHHHH-----------------
Confidence 99999998 8888899999999998 9999999999999 99999999999999988877655
Q ss_pred HHHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHHH
Q 019602 179 ALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKV 258 (338)
Q Consensus 179 ~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~~ 258 (338)
.++|+ +++..||.+++.+|++++..
T Consensus 195 ---------------------------------------------------~~~a~----~la~~~~~a~~~~K~~l~~~ 219 (256)
T PRK06143 195 ---------------------------------------------------ERLAA----SLAGCGPQALRQQKRLLREW 219 (256)
T ss_pred ---------------------------------------------------HHHHH----HHHcCCHHHHHHHHHHHHHH
Confidence 35677 99999999999999999987
Q ss_pred hhhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCC
Q 019602 259 ASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDK 303 (338)
Q Consensus 259 ~~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK 303 (338)
. ..++++.+..|...+..++.++|++||+++|+ +|
T Consensus 220 ~---------~~~l~~~~~~e~~~~~~~~~~~d~~e~~~af~-ek 254 (256)
T PRK06143 220 E---------DMPLDVAIDDSVAEFGAAFLTGEPQRHMAAFL-NR 254 (256)
T ss_pred c---------cCCHHHHHHHHHHHHHHHhcChHHHHHHHHHH-hh
Confidence 6 67899999999999999999999999999999 67
No 37
>PRK05864 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4.4e-40 Score=308.96 Aligned_cols=208 Identities=17% Similarity=0.195 Sum_probs=173.0
Q ss_pred CCCCeEEcCCChhHHhhhhccC---ChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeE
Q 019602 20 FPNNAVICGQSPLNHLQSTTQN---QLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTL 96 (338)
Q Consensus 20 ~~~~~F~aG~Dl~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~ 96 (338)
..|++||+|+|++++....... +.......+.....++.++..+||||||+|||+|+|||++|+++||+|||+++++
T Consensus 62 g~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~LalacD~ria~~~a~ 141 (276)
T PRK05864 62 GAGRGFSSGADHKSAGVVPHVEGLTRPTYALRSMELLDDVILALRRLHQPVIAAVNGPAIGGGLCLALAADIRVASSSAY 141 (276)
T ss_pred CCCCCeecCcchhhhhcccccccccchhHHHHHHHHHHHHHHHHHhCCCCEEEEECCEeehhHHHHHHhCCEEEeeCCCE
Confidence 3678999999999874211000 1111112334445677889999999999999999999999999999999999999
Q ss_pred EeCCCCCcCcCC-CchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchh
Q 019602 97 LAMPENGIGLFP-DVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQ 175 (338)
Q Consensus 97 f~~pe~~lGl~P-~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~ 175 (338)
|++||+++|++| ++|++++|++++|++ ++++|+++|++++ |+||+++|||++++|++++.+.+
T Consensus 142 f~~pe~~~Gl~p~~~g~~~~l~~~vG~~-~A~~l~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a-------------- 205 (276)
T PRK05864 142 FRAAGINNGLTASELGLSYLLPRAIGSS-RAFEIMLTGRDVD-AEEAERIGLVSRQVPDEQLLDTC-------------- 205 (276)
T ss_pred ecCcccccCCCCCCcchheehHhhhCHH-HHHHHHHcCCccC-HHHHHHcCCcceeeCHHHHHHHH--------------
Confidence 999999999997 789999999999998 9999999999999 99999999999999988877654
Q ss_pred HHHHHHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHH
Q 019602 176 DIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYF 255 (338)
Q Consensus 176 ~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l 255 (338)
.+||+ +|...||.+++.+|+++
T Consensus 206 ------------------------------------------------------~~~a~----~la~~~p~a~~~~K~~l 227 (276)
T PRK05864 206 ------------------------------------------------------YAIAA----RMAGFSRPGIELTKRTL 227 (276)
T ss_pred ------------------------------------------------------HHHHH----HHHhCCHHHHHHHHHHH
Confidence 35777 99999999999999999
Q ss_pred HHHhhhcCCCccccC-CHHHHHHHHHHHH-hhhCCCCCHHHHHHhhhcCCCCCCCCCCC
Q 019602 256 SKVASAHGKTDNELS-KLSGVMKYEYRVA-LRSSLRSDFAEGVRAVLVDKDQNPKWNPA 312 (338)
Q Consensus 256 ~~~~~~~~~~~~~~~-~l~~~l~~e~~~~-~~~~~~~d~~eg~~afl~eK~r~p~w~~~ 312 (338)
+... .. ++.+.+..|.... ...+.++|++||+++|+ +| |+|+|.+.
T Consensus 228 ~~~~---------~~~~~~~~~~~e~~~~~~~~~~~~d~~e~~~af~-~k-r~p~~~~~ 275 (276)
T PRK05864 228 WSGL---------DAASLEAHMQAEGLGQLFVRLLTANFEEAVAARA-EK-RPPVFTDD 275 (276)
T ss_pred Hhhc---------ccCCHHHHHHHHHHHHHHHhccChhHHHHHHHHh-cc-CCCCCCCC
Confidence 8765 43 6888888886532 23578999999999999 78 89999764
No 38
>PRK06688 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=6e-40 Score=305.18 Aligned_cols=201 Identities=21% Similarity=0.308 Sum_probs=179.0
Q ss_pred CCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeCC
Q 019602 21 PNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMP 100 (338)
Q Consensus 21 ~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~p 100 (338)
.|++||+|+|+.++.... .. . ..+......++.++..+||||||+|||+|+|||++|+++||||||+++++|++|
T Consensus 58 ~g~~F~aG~Dl~~~~~~~--~~-~--~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~ria~~~a~f~~p 132 (259)
T PRK06688 58 AGRAFSAGGDIKDFPKAP--PK-P--PDELAPVNRFLRAIAALPKPVVAAVNGPAVGVGVSLALACDLVYASESAKFSLP 132 (259)
T ss_pred CCCCccCccCHHHHhccC--cc-h--HHHHHHHHHHHHHHHcCCCCEEEEECCeeecHHHHHHHhCCEEEecCCCEecCc
Confidence 568999999999876321 11 1 234455567888999999999999999999999999999999999999999999
Q ss_pred CCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHHHHH
Q 019602 101 ENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVAL 180 (338)
Q Consensus 101 e~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~ 180 (338)
|+++|++|++|+++++++++|+. ++++|+++|++++ |+||+++||||+++|++++.+.+
T Consensus 133 e~~~G~~p~~g~~~~l~~~~G~~-~a~~l~l~g~~~~-a~eA~~~Glv~~v~~~~~l~~~a------------------- 191 (259)
T PRK06688 133 FAKLGLCPDAGGSALLPRLIGRA-RAAEMLLLGEPLS-AEEALRIGLVNRVVPAAELDAEA------------------- 191 (259)
T ss_pred hhhcCCCCCcchhhHHHHHhhHH-HHHHHHHhCCccC-HHHHHHcCCcceecCHHHHHHHH-------------------
Confidence 99999999999999999999998 9999999999999 99999999999999987776654
Q ss_pred HHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHHHhh
Q 019602 181 LAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVAS 260 (338)
Q Consensus 181 l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~~~~ 260 (338)
.++|+ +|...||.+++.+|+.++...
T Consensus 192 -------------------------------------------------~~~a~----~i~~~~~~a~~~~K~~l~~~~- 217 (259)
T PRK06688 192 -------------------------------------------------DAQAA----KLAAGPASALRYTKRAINAAT- 217 (259)
T ss_pred -------------------------------------------------HHHHH----HHHhCCHHHHHHHHHHHHhhh-
Confidence 24666 889999999999999999877
Q ss_pred hcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCCCCCCCCCC
Q 019602 261 AHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNP 311 (338)
Q Consensus 261 ~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK~r~p~w~~ 311 (338)
..++++.+..|.+.+..++.++|+++++++|+ +| ++|+|++
T Consensus 218 --------~~~~~~~~~~e~~~~~~~~~~~~~~~~~~af~-~~-~~p~~~~ 258 (259)
T PRK06688 218 --------LTELEEALAREAAGFGRLLRTPDFREGATAFI-EK-RKPDFTG 258 (259)
T ss_pred --------hCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHH-cC-CCCCCCC
Confidence 67899999999999999999999999999999 68 8999975
No 39
>PRK05674 gamma-carboxygeranoyl-CoA hydratase; Validated
Probab=100.00 E-value=6.2e-40 Score=306.22 Aligned_cols=206 Identities=19% Similarity=0.269 Sum_probs=172.5
Q ss_pred cCCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEe
Q 019602 19 SFPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLA 98 (338)
Q Consensus 19 s~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~ 98 (338)
+..|++||+|+|+.++..... .+.............++..+.++||||||+|||+|+|||++|+++||||||+++++|+
T Consensus 57 ~g~g~~F~aG~Dl~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~kPvIaaV~G~a~GgG~~lal~~D~~ia~~~a~f~ 135 (265)
T PRK05674 57 RGRGRHFSAGADLAWMQQSAD-LDYNTNLDDARELAELMYNLYRLKIPTLAVVQGAAFGGALGLISCCDMAIGADDAQFC 135 (265)
T ss_pred ECCCCCcccCcCHHHHhhccc-ccchhhhHHHHHHHHHHHHHHcCCCCEEEEEcCEEEechhhHhhhcCEEEEeCCCEEe
Confidence 345789999999998753111 1110111122334567888999999999999999999999999999999999999999
Q ss_pred CCCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHHH
Q 019602 99 MPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIV 178 (338)
Q Consensus 99 ~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~ 178 (338)
+||+++|++|++|++ ++++++|.+ ++++|++||+.++ |+||+++|||++|+|++++.+.+
T Consensus 136 ~pe~~~Gi~p~~~~~-~l~~~vG~~-~a~~l~ltg~~~~-a~eA~~~Glv~~vv~~~~l~~~a----------------- 195 (265)
T PRK05674 136 LSEVRIGLAPAVISP-FVVKAIGER-AARRYALTAERFD-GRRARELGLLAESYPAAELEAQV----------------- 195 (265)
T ss_pred CcccccCCCcchhHH-HHHHHhCHH-HHHHHHHhCcccC-HHHHHHCCCcceecCHHHHHHHH-----------------
Confidence 999999999998766 588899998 9999999999999 99999999999999987777655
Q ss_pred HHHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHHH
Q 019602 179 ALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKV 258 (338)
Q Consensus 179 ~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~~ 258 (338)
.+||+ +|+++||.+++.+|+.++..
T Consensus 196 ---------------------------------------------------~~~a~----~la~~~p~a~~~~K~~l~~~ 220 (265)
T PRK05674 196 ---------------------------------------------------EAWIA----NLLLNSPQALRASKDLLREV 220 (265)
T ss_pred ---------------------------------------------------HHHHH----HHHhcCHHHHHHHHHHHHHh
Confidence 35777 89999999999999999988
Q ss_pred hhhcCCCccccCCHHHHHHH-HHHHHhhhCCCCCHHHHHHhhhcCCCCCCCCCC
Q 019602 259 ASAHGKTDNELSKLSGVMKY-EYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNP 311 (338)
Q Consensus 259 ~~~~~~~~~~~~~l~~~l~~-e~~~~~~~~~~~d~~eg~~afl~eK~r~p~w~~ 311 (338)
. ..++.+.+.. +...+..++.++|++||+++|+ +| |+|.|..
T Consensus 221 ~---------~~~~~~~~~~~~~~~~~~~~~s~d~~e~~~af~-~k-r~p~~~~ 263 (265)
T PRK05674 221 G---------DGELSPALRRYCENAIARIRVSAEGQEGLRAFL-EK-RTPAWQT 263 (265)
T ss_pred h---------ccChhHHHHHHHHHHHHHHhcCHHHHHHHHHHH-cc-CCCCCCC
Confidence 7 6678787765 4567777889999999999999 78 8999974
No 40
>TIGR01929 menB naphthoate synthase (dihydroxynaphthoic acid synthetase). This model represents an enzyme, naphthoate synthase (dihydroxynaphthoic acid synthetase), which is involved in the fifth step of the menaquinone biosynthesis pathway. Together with o-succinylbenzoate-CoA ligase (menE: TIGR01923), this enzyme takes 2-succinylbenzoate and converts it into 1,4-di-hydroxy-2-naphthoate. Included above the trusted cutoff are two enzymes from Arabadopsis thaliana and one from Staphylococcus aureus which are identified as putative enoyl-CoA hydratase/isomerases. These enzymes group with the naphthoate synthases when building a tree and when doing BLAST searches.
Probab=100.00 E-value=8.1e-40 Score=304.49 Aligned_cols=205 Identities=16% Similarity=0.167 Sum_probs=170.7
Q ss_pred ccCCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEE
Q 019602 18 SSFPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLL 97 (338)
Q Consensus 18 ~s~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f 97 (338)
++.++++||+|+|++++..... ...... . ......++..+..+||||||+|||+|+|||++|+++||+|||+++++|
T Consensus 54 tg~g~~~F~aG~Dl~~~~~~~~-~~~~~~-~-~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f 130 (259)
T TIGR01929 54 TGAGDKAFCSGGDQKVRGDYGY-IDDSGV-H-RLNVLDVQRQIRTCPKPVIAMVNGYAIGGGHVLHVVCDLTIAAENARF 130 (259)
T ss_pred EeCCCCceEeCcChHhHhhccc-cchhhH-H-HHHHHHHHHHHHhCCCCEEEEEcCEEehHHHHHHHhCCEEEecCCCEe
Confidence 3434379999999987642111 111111 1 112335677899999999999999999999999999999999999999
Q ss_pred eCCCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHH
Q 019602 98 AMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDI 177 (338)
Q Consensus 98 ~~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~ 177 (338)
++||+++|++|++|++++|++++|++ ++++|+++|++++ |+||+++||||+|||++++.+.+
T Consensus 131 ~~pe~~~G~~p~~~~~~~l~~~vG~~-~a~~l~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a---------------- 192 (259)
T TIGR01929 131 GQTGPKVGSFDGGYGSSYLARIVGQK-KAREIWFLCRQYD-AEQALDMGLVNTVVPLADLEKET---------------- 192 (259)
T ss_pred cCcccccccCCCccHHHHHHHHhHHH-HHHHHHHhCCccC-HHHHHHcCCcccccCHHHHHHHH----------------
Confidence 99999999999999999999999998 9999999999999 99999999999999987776654
Q ss_pred HHHHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHH
Q 019602 178 VALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSK 257 (338)
Q Consensus 178 ~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~ 257 (338)
.++|+ +|+..||.+++.+|++++.
T Consensus 193 ----------------------------------------------------~~~a~----~la~~~~~a~~~~K~~l~~ 216 (259)
T TIGR01929 193 ----------------------------------------------------VRWCR----EILQKSPMAIRMLKAALNA 216 (259)
T ss_pred ----------------------------------------------------HHHHH----HHHhCCHHHHHHHHHHHHh
Confidence 35667 9999999999999999987
Q ss_pred HhhhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCCCCCCCCCC
Q 019602 258 VASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNP 311 (338)
Q Consensus 258 ~~~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK~r~p~w~~ 311 (338)
.. . ........|.+.+..++.++|++||+++|+ +| |+|+|++
T Consensus 217 ~~---------~-~~~~~~~~e~~~~~~~~~~~d~~egi~af~-~k-r~p~~~~ 258 (259)
T TIGR01929 217 DC---------D-GQAGLQELAGNATMLFYMTEEGQEGRNAFL-EK-RQPDFSK 258 (259)
T ss_pred hh---------c-cchHHHHHHHHHHHHHhcCccHHHHHHHHh-cc-CCCCCCC
Confidence 65 2 234556667778888999999999999999 78 8999974
No 41
>PRK07327 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=5.6e-40 Score=307.04 Aligned_cols=204 Identities=14% Similarity=0.139 Sum_probs=170.4
Q ss_pred CCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeC
Q 019602 20 FPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAM 99 (338)
Q Consensus 20 ~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~ 99 (338)
..|++||+|+||.++.... .+.+....++.....++..|..+||||||+|||+|+|||++|+++||+|||+++++|++
T Consensus 64 g~g~~F~aG~Dl~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~ 141 (268)
T PRK07327 64 GEGKAFSAGGDLALVEEMA--DDFEVRARVWREARDLVYNVINCDKPIVSAIHGPAVGAGLVAALLADISIAAKDARIID 141 (268)
T ss_pred CCCCCcccccCHHHHhhcc--CcHHHHHHHHHHHHHHHHHHHcCCCCEEEEEcCeeeehhhHHHHhCCEEEecCCCEEeC
Confidence 3568999999999875321 11122333445556788899999999999999999999999999999999999999999
Q ss_pred CCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHHHH
Q 019602 100 PENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVA 179 (338)
Q Consensus 100 pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~ 179 (338)
||+++|++|++|++++|++++|.+ ++++|++||++++ |+||+++|||++++|++++.+.+.
T Consensus 142 pe~~~Gl~p~~g~~~~l~~~vG~~-~a~~l~ltg~~~~-a~eA~~~Glv~~vv~~~~l~~~a~----------------- 202 (268)
T PRK07327 142 GHTRLGVAAGDHAAIVWPLLCGMA-KAKYYLLLCEPVS-GEEAERIGLVSLAVDDDELLPKAL----------------- 202 (268)
T ss_pred cccccCCCCCcchhhHHHHHhCHH-HHHHHHHcCCccC-HHHHHHcCCcceecCHHHHHHHHH-----------------
Confidence 999999999999999999999998 9999999999999 999999999999999888777553
Q ss_pred HHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHHHh
Q 019602 180 LLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVA 259 (338)
Q Consensus 180 ~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~~~ 259 (338)
++|+ +|++.||.+++.+|++++...
T Consensus 203 ---------------------------------------------------~~a~----~la~~~~~a~~~~K~~l~~~~ 227 (268)
T PRK07327 203 ---------------------------------------------------EVAE----RLAAGSQTAIRWTKYALNNWL 227 (268)
T ss_pred ---------------------------------------------------HHHH----HHHcCCHHHHHHHHHHHHHhh
Confidence 5666 999999999999999998753
Q ss_pred hhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCCCCCCCCCC
Q 019602 260 SAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNP 311 (338)
Q Consensus 260 ~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK~r~p~w~~ 311 (338)
. .....++..+..|. ..+.++|++||+++|+ +| |+|.|.+
T Consensus 228 ~------~~~~~~~~~~~~~~----~~~~~~d~~eg~~af~-ek-r~p~~~~ 267 (268)
T PRK07327 228 R------MAGPTFDTSLALEF----MGFSGPDVREGLASLR-EK-RAPDFPG 267 (268)
T ss_pred h------hhhhhHHHHHHHHH----HHccChhHHHHHHHHH-hc-CCCCCCC
Confidence 0 00224555555543 4678999999999999 78 8999975
No 42
>PRK09120 p-hydroxycinnamoyl CoA hydratase/lyase; Validated
Probab=100.00 E-value=5.9e-40 Score=307.89 Aligned_cols=200 Identities=21% Similarity=0.219 Sum_probs=169.7
Q ss_pred CCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeC
Q 019602 20 FPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAM 99 (338)
Q Consensus 20 ~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~ 99 (338)
..|++||+|+|+.++...................+.++.+|..+||||||+|||+|+|||++|+++||+|||+++++|++
T Consensus 60 g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lal~cD~~ia~~~a~f~~ 139 (275)
T PRK09120 60 GAGDAWSAGMDLKEYFRETDAQPEILQERIRREAYGWWRRLRWYQKPTIAMVNGWCFGGGFSPLVACDLAIAADEAQFGL 139 (275)
T ss_pred cCCCceecCcCHHHHhhccccchhHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCEEechhHHHHHhCCEEEEeCCcEecC
Confidence 35789999999998753221111111222333445678889999999999999999999999999999999999999999
Q ss_pred CCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHHHH
Q 019602 100 PENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVA 179 (338)
Q Consensus 100 pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~ 179 (338)
||+++|++|++|++++|++++|++ ++++|++||++++ |+||+++|||++|||++++.+.+
T Consensus 140 pe~~~Gl~p~~g~~~~l~~~iG~~-~a~~llltg~~~~-A~eA~~~Glv~~vv~~~~l~~~a------------------ 199 (275)
T PRK09120 140 SEINWGIPPGGGVSKAMADTVGHR-DALYYIMTGETFT-GRKAAEMGLVNESVPLAQLRART------------------ 199 (275)
T ss_pred CccccCCCCCcchHHHHHHHcCHH-HHHHHHhcCCccC-HHHHHHcCCcceecCHHHHHHHH------------------
Confidence 999999999999999999999998 9999999999999 99999999999999988887765
Q ss_pred HHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHHHh
Q 019602 180 LLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVA 259 (338)
Q Consensus 180 ~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~~~ 259 (338)
.++|+ +|+..||.+++.+|++++...
T Consensus 200 --------------------------------------------------~~~a~----~la~~~p~a~~~~K~~l~~~~ 225 (275)
T PRK09120 200 --------------------------------------------------RELAA----KLLEKNPVVLRAAKDGFKRVR 225 (275)
T ss_pred --------------------------------------------------HHHHH----HHHhCCHHHHHHHHHHHHHHH
Confidence 35666 999999999999999999887
Q ss_pred hhcCCCccccCCHHHHHHHHHHH--HhhhCCCC-CHHHHHHhhhcCC
Q 019602 260 SAHGKTDNELSKLSGVMKYEYRV--ALRSSLRS-DFAEGVRAVLVDK 303 (338)
Q Consensus 260 ~~~~~~~~~~~~l~~~l~~e~~~--~~~~~~~~-d~~eg~~afl~eK 303 (338)
..++.+.+..|... ...++.++ |++||+++|+ +|
T Consensus 226 ---------~~~~~~~~~~e~~~~~~~~~~~~~~d~~eg~~afl-~k 262 (275)
T PRK09120 226 ---------ELTWDQAEDYLYAKLEQANSLDPEGGREEGLKQFL-DD 262 (275)
T ss_pred ---------hCCHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHH-hc
Confidence 67899998887653 44567888 8999999999 56
No 43
>TIGR03210 badI 2-ketocyclohexanecarboxyl-CoA hydrolase. Members of this protein family are 2-ketocyclohexanecarboxyl-CoA hydrolase, a ring-opening enzyme that acts in catabolism of molecules such as benzoyl-CoA and cyclohexane carboxylate. It converts -ketocyclohexanecarboxyl-CoA to pimelyl-CoA. It is not sensitive to oxygen.
Probab=100.00 E-value=1.5e-39 Score=302.16 Aligned_cols=202 Identities=17% Similarity=0.179 Sum_probs=166.6
Q ss_pred ccCCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEE
Q 019602 18 SSFPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLL 97 (338)
Q Consensus 18 ~s~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f 97 (338)
++.++++||+|+|++++... .... ..+......++.+|..+||||||+|||+|+|||++|+++||+||++++++|
T Consensus 53 ~g~g~~~F~aG~Dl~~~~~~--~~~~---~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f 127 (256)
T TIGR03210 53 AGAGDKAFCTGGDQSTHDGG--YDGR---GTIGLPMEELHSAIRDVPKPVIARVQGYAIGGGNVLVTICDLTIASEKAQF 127 (256)
T ss_pred ecCCCCceecCcChHHHhcc--ccch---hHHHHHHHHHHHHHHhCCCCEEEEECCEEehhhHHHHHhCCEEEEeCCCEE
Confidence 34344799999999987421 1111 112223345788899999999999999999999999999999999999999
Q ss_pred eCCCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHH
Q 019602 98 AMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDI 177 (338)
Q Consensus 98 ~~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~ 177 (338)
++||+++|++|+++++++|++++|++ ++++|++||++++ |+||+++||||+++|++++.+.+
T Consensus 128 ~~pe~~~G~~~~~~~~~~l~~~vG~~-~A~~lll~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a---------------- 189 (256)
T TIGR03210 128 GQVGPKVGSVDPGYGTALLARVVGEK-KAREIWYLCRRYT-AQEALAMGLVNAVVPHDQLDAEV---------------- 189 (256)
T ss_pred ecccccccccCCccHHHHHHHHhCHH-HHHHHHHhCCCcC-HHHHHHcCCceeeeCHHHHHHHH----------------
Confidence 99999999998888889999999998 9999999999999 99999999999999988777655
Q ss_pred HHHHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHH
Q 019602 178 VALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSK 257 (338)
Q Consensus 178 ~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~ 257 (338)
.++|+ +|+..||.+++.+|++++.
T Consensus 190 ----------------------------------------------------~~~a~----~ia~~~~~a~~~~K~~l~~ 213 (256)
T TIGR03210 190 ----------------------------------------------------QKWCD----EIVEKSPTAIAIAKRSFNM 213 (256)
T ss_pred ----------------------------------------------------HHHHH----HHHhCCHHHHHHHHHHHHH
Confidence 35666 9999999999999999987
Q ss_pred HhhhcCCCccccCCH-HHHHHHHHHHHhhhCCCCCHHHHHHhhhcCCCCCCCCCC
Q 019602 258 VASAHGKTDNELSKL-SGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNP 311 (338)
Q Consensus 258 ~~~~~~~~~~~~~~l-~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK~r~p~w~~ 311 (338)
.. .... .+. .|...+..++.++|++||+++|+ +| |+|.|++
T Consensus 214 ~~---------~~~~~~~~--~~~~~~~~~~~~~d~~e~~~af~-~k-r~p~~~~ 255 (256)
T TIGR03210 214 DT---------AHQRGIAG--MGMYALKLYYDTAESREGVKAFQ-EK-RKPEFRK 255 (256)
T ss_pred hh---------cccchHHH--HHHHHHHHHccChhHHHHHHHHh-cc-CCCCCCC
Confidence 65 2111 111 24456777889999999999999 78 8999974
No 44
>PRK06210 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.3e-39 Score=305.13 Aligned_cols=206 Identities=18% Similarity=0.255 Sum_probs=175.5
Q ss_pred CCCCeEEcCCChhHHhhhhccCChH---HHHHHH----HHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEe
Q 019602 20 FPNNAVICGQSPLNHLQSTTQNQLS---EMIEVF----TAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVT 92 (338)
Q Consensus 20 ~~~~~F~aG~Dl~~~~~~~~~~~~~---~~~~~~----~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias 92 (338)
..|++||+|+|+.++... ...+.. ....+. ....+++.+|..+||||||+|||+|+|||++|+++||+|||+
T Consensus 58 g~g~~FcaG~Dl~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~~ia~ 136 (272)
T PRK06210 58 GAGRGFCAGADMGELQTI-DPSDGRRDTDVRPFVGNRRPDYQTRYHFLTALRKPVIAAINGACAGIGLTHALMCDVRFAA 136 (272)
T ss_pred CCCCCcccccCHHHHhcc-CcccccccccchhhhhhhhhhHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEe
Confidence 357899999999987531 111000 000111 112345678999999999999999999999999999999999
Q ss_pred CCeEEeCCCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCC
Q 019602 93 EKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSED 172 (338)
Q Consensus 93 ~~a~f~~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~ 172 (338)
++++|++||+++|++|++|++++|++++|++ ++++|++||++++ |++|+++||||+++|++++.+.+
T Consensus 137 ~~a~f~~pe~~~Gl~p~~g~~~~l~~~ig~~-~a~~l~ltg~~~~-a~eA~~~Glv~~vv~~~~l~~~a----------- 203 (272)
T PRK06210 137 DGAKFTTAFARRGLIAEHGISWILPRLVGHA-NALDLLLSARTFY-AEEALRLGLVNRVVPPDELMERT----------- 203 (272)
T ss_pred CCCEEechHHhcCCCCCCchhhhhHhhhCHH-HHHHHHHcCCccC-HHHHHHcCCcceecCHHHHHHHH-----------
Confidence 9999999999999999999999999999998 9999999999999 99999999999999987766644
Q ss_pred chhHHHHHHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhcc-CchHHHHH
Q 019602 173 PHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKG-APFSLCLT 251 (338)
Q Consensus 173 ~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~-sp~al~~~ 251 (338)
.+||+ +|+.. ||.+++.+
T Consensus 204 ---------------------------------------------------------~~~a~----~i~~~~~p~a~~~~ 222 (272)
T PRK06210 204 ---------------------------------------------------------LAYAE----DLARNVSPASMAVI 222 (272)
T ss_pred ---------------------------------------------------------HHHHH----HHHhcCCHHHHHHH
Confidence 35777 88875 99999999
Q ss_pred HHHHHHHhhhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCCCCCCCCCC
Q 019602 252 QKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNP 311 (338)
Q Consensus 252 k~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK~r~p~w~~ 311 (338)
|++++... ..++++.++.|...+..++.++|++||+++|+ +| |+|.|.+
T Consensus 223 K~~l~~~~---------~~~l~~~~~~e~~~~~~~~~~~~~~egi~af~-~k-r~p~~~~ 271 (272)
T PRK06210 223 KRQLYEDA---------FQTLAEATARANREMHESLQRPDFIEGVASFL-EK-RPPRFPG 271 (272)
T ss_pred HHHHHhcc---------cCCHHHHHHHHHHHHHHHhcCccHHHHHHHHh-cc-CCCCCCC
Confidence 99999876 67899999999999999999999999999999 78 8999974
No 45
>PRK06495 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.8e-39 Score=301.77 Aligned_cols=202 Identities=18% Similarity=0.266 Sum_probs=175.5
Q ss_pred CCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeC
Q 019602 20 FPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAM 99 (338)
Q Consensus 20 ~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~ 99 (338)
..|++||+|+|++++..... .......+......++.++..+||||||+|||+|+|||++|+++||+|||+++++|++
T Consensus 55 g~g~~FcaG~Dl~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~ 132 (257)
T PRK06495 55 GAGKVFCAGADLKGRPDVIK--GPGDLRAHNRRTRECFHAIRECAKPVIAAVNGPALGAGLGLVASCDIIVASENAVFGL 132 (257)
T ss_pred CCCCCcccCcCHHhHhhccC--CchhHHHHHHHHHHHHHHHHhCCCCEEEEECCeeehhHHHHHHhCCEEEecCCCEeeC
Confidence 35789999999998753111 1112223344456678889999999999999999999999999999999999999999
Q ss_pred CCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHHHH
Q 019602 100 PENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVA 179 (338)
Q Consensus 100 pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~ 179 (338)
||+++|++ |+++++++++|++ ++++|+++|+.++ |+||+++||||++||++++.+.+
T Consensus 133 pe~~~Gl~---~~~~~l~~~~g~~-~a~~lll~g~~~~-a~eA~~~GLv~~vv~~~~~~~~a------------------ 189 (257)
T PRK06495 133 PEIDVGLA---GGGKHAMRLFGHS-LTRRMMLTGYRVP-AAELYRRGVIEACLPPEELMPEA------------------ 189 (257)
T ss_pred hhhccCcc---ccHHHHHHHhCHH-HHHHHHHcCCeeC-HHHHHHcCCcceecCHHHHHHHH------------------
Confidence 99999997 4567899999998 9999999999999 99999999999999988877655
Q ss_pred HHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHHHh
Q 019602 180 LLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVA 259 (338)
Q Consensus 180 ~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~~~ 259 (338)
.+|++ +|+..||.+++.+|++++...
T Consensus 190 --------------------------------------------------~~~a~----~l~~~~~~a~~~~K~~l~~~~ 215 (257)
T PRK06495 190 --------------------------------------------------MEIAR----EIASKSPLATRLAKDALNTIE 215 (257)
T ss_pred --------------------------------------------------HHHHH----HHHhCCHHHHHHHHHHHHHHh
Confidence 35677 999999999999999999876
Q ss_pred hhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCCCCCCCCCC
Q 019602 260 SAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNP 311 (338)
Q Consensus 260 ~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK~r~p~w~~ 311 (338)
..++.++++.|...+..++.++|++||+++|+ +| |+|.|++
T Consensus 216 ---------~~~l~~~~~~e~~~~~~~~~s~d~~egi~af~-~k-r~p~~~~ 256 (257)
T PRK06495 216 ---------NMSLRDGYRYEQDITAKLAKTEDAKEAQRAFL-EK-RPPVFKG 256 (257)
T ss_pred ---------cCCHHHHHHHHHHHHHHHhcChHHHHHHHHHh-cc-CCCCCCC
Confidence 67899999999999999999999999999999 78 8999975
No 46
>PRK11423 methylmalonyl-CoA decarboxylase; Provisional
Probab=100.00 E-value=1.6e-39 Score=302.77 Aligned_cols=203 Identities=15% Similarity=0.185 Sum_probs=174.5
Q ss_pred CCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeCC
Q 019602 21 PNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMP 100 (338)
Q Consensus 21 ~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~p 100 (338)
++++||+|+|+.++... ..+ ...+.....+++..+..+||||||+|||+|+|||++|+++||+|||+++++|++|
T Consensus 58 ~~~~FcaG~Dl~~~~~~--~~~---~~~~~~~~~~l~~~i~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~p 132 (261)
T PRK11423 58 GSKVWSAGHDIHELPSG--GRD---PLSYDDPLRQILRMIQKFPKPVIAMVEGSVWGGAFELIMSCDLIIAASTSTFAMT 132 (261)
T ss_pred CCCeeECCcCHHHHhhc--ccc---HHHHHHHHHHHHHHHHhCCCCEEEEEecEEechHHHHHHhCCEEEecCCCEecCc
Confidence 35899999999987421 111 1123344556888899999999999999999999999999999999999999999
Q ss_pred CCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHHHHH
Q 019602 101 ENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVAL 180 (338)
Q Consensus 101 e~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~ 180 (338)
|+++|++|++|+++++++++|++ ++++|+++|++++ |+||+++||||+|||++++.+.+
T Consensus 133 e~~~Gl~~~~g~~~~l~~~vg~~-~a~~l~l~g~~~~-a~eA~~~GLv~~vv~~~~l~~~a------------------- 191 (261)
T PRK11423 133 PANLGVPYNLSGILNFTNDAGFH-IVKEMFFTASPIT-AQRALAVGILNHVVEVEELEDFT------------------- 191 (261)
T ss_pred hhhcCCCCCccHHHHHHHHhHHH-HHHHHHHcCCCcC-HHHHHHcCCcCcccCHHHHHHHH-------------------
Confidence 99999999999999999999998 9999999999999 99999999999999988777654
Q ss_pred HHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHHHhh
Q 019602 181 LAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVAS 260 (338)
Q Consensus 181 l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~~~~ 260 (338)
.++++ +|...||.+++.+|++++...
T Consensus 192 -------------------------------------------------~~~a~----~l~~~~~~a~~~~K~~~~~~~- 217 (261)
T PRK11423 192 -------------------------------------------------LQMAH----HISEKAPLAIAVIKEQLRVLG- 217 (261)
T ss_pred -------------------------------------------------HHHHH----HHHhcCHHHHHHHHHHHHhhc-
Confidence 24666 899999999999999998654
Q ss_pred hcCCCccccCCH-HHHHHHHHHHHhhhCCCCCHHHHHHhhhcCCCCCCCCCCC
Q 019602 261 AHGKTDNELSKL-SGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPA 312 (338)
Q Consensus 261 ~~~~~~~~~~~l-~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK~r~p~w~~~ 312 (338)
....+ ++.++.|.+.+..++.++|++||+.+|+ +| |+|.|+++
T Consensus 218 -------~~~~~~~~~~~~~~~~~~~~~~s~d~~eg~~af~-~k-r~p~~~~~ 261 (261)
T PRK11423 218 -------EAHPMNPDEFERIQGLRRAVYDSEDYQEGMNAFL-EK-RKPVFVGH 261 (261)
T ss_pred -------ccCCcchHHHHHHHHHHHHHhCChhHHHHHHHHh-cc-CCCCCCCC
Confidence 01334 6888888888899999999999999999 78 89999753
No 47
>PRK07260 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.4e-39 Score=300.65 Aligned_cols=200 Identities=20% Similarity=0.283 Sum_probs=174.5
Q ss_pred CCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeC
Q 019602 20 FPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAM 99 (338)
Q Consensus 20 ~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~ 99 (338)
..|++||+|+|+.++.......+......+.....+++.++.++||||||+|||+|+|||++|+++||+|||+++++|++
T Consensus 54 g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~ria~~~a~f~~ 133 (255)
T PRK07260 54 ANGKVFSVGGDLVEMKRAVDEDDVQSLVKIAELVNEISFAIKQLPKPVIMCVDGAVAGAAANMAVAADFCIASTKTKFIQ 133 (255)
T ss_pred CCCCCcccccCHHHHHhhccccchhhHHHHHHHHHHHHHHHHcCCCCEEEEecCeeehhhHHHHHhCCEEEEeCCCEEec
Confidence 35789999999998763222122122223334455678899999999999999999999999999999999999999999
Q ss_pred CCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHHHH
Q 019602 100 PENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVA 179 (338)
Q Consensus 100 pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~ 179 (338)
||+++|++|++|++++|++++|++ ++++|+++|++++ |+||+++|||++++|++++.+.+.
T Consensus 134 pe~~~Gl~p~~g~~~~l~~~vg~~-~a~~l~l~g~~~s-a~eA~~~Glv~~vv~~~~l~~~a~----------------- 194 (255)
T PRK07260 134 AFVGVGLAPDAGGLFLLTRAIGLN-RATHLAMTGEALT-AEKALEYGFVYRVAESEKLEKTCE----------------- 194 (255)
T ss_pred hHhhcCCCCCCchhhhhHHhhCHH-HHHHHHHhCCccC-HHHHHHcCCcceecCHhHHHHHHH-----------------
Confidence 999999999999999999999998 9999999999999 999999999999999887776542
Q ss_pred HHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHHHh
Q 019602 180 LLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVA 259 (338)
Q Consensus 180 ~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~~~ 259 (338)
++++ ++++.||.+++.+|+.++...
T Consensus 195 ---------------------------------------------------~~a~----~la~~~~~a~~~~K~~~~~~~ 219 (255)
T PRK07260 195 ---------------------------------------------------QLLK----KLRRGSSNSYAAIKSLVWESF 219 (255)
T ss_pred ---------------------------------------------------HHHH----HHHcCCHHHHHHHHHHHHHHh
Confidence 4666 999999999999999999887
Q ss_pred hhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCC
Q 019602 260 SAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDK 303 (338)
Q Consensus 260 ~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK 303 (338)
..++++.+..|...+..++.++|++||+++|+ +|
T Consensus 220 ---------~~~~~~~~~~e~~~~~~~~~~~~~~e~~~af~-~k 253 (255)
T PRK07260 220 ---------FKGWEDYAKLELALQESLAFKEDFKEGVRAFS-ER 253 (255)
T ss_pred ---------hcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHH-hc
Confidence 67899999999999999999999999999999 66
No 48
>PRK06144 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.8e-39 Score=301.41 Aligned_cols=202 Identities=19% Similarity=0.248 Sum_probs=170.8
Q ss_pred ccCCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEE
Q 019602 18 SSFPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLL 97 (338)
Q Consensus 18 ~s~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f 97 (338)
++.++++||+|+|+.++... . ..+....+......++.++.++||||||+|||+|+|||++|+++||+|||+++++|
T Consensus 59 tg~g~~~F~aG~Dl~~~~~~-~--~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~~ia~~~a~f 135 (262)
T PRK06144 59 RGAGDKAFVAGTDIAQFRAF-S--TAEDAVAYERRIDRVLGALEQLRVPTIAAIAGACVGGGAAIAAACDLRIATPSARF 135 (262)
T ss_pred ecCCCCceecCcCHHHHhhc-c--chhHHHHHHHHHHHHHHHHHhCCCCEEEEECCeeeehHHHHHHhCCEEEecCCCEe
Confidence 34344799999999987531 1 11122234444556788899999999999999999999999999999999999999
Q ss_pred eCCCCC-cCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhH
Q 019602 98 AMPENG-IGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQD 176 (338)
Q Consensus 98 ~~pe~~-lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~ 176 (338)
++||++ +|++|++|++++|++++|.+ ++++++++|++++ |+||+++||||+|+|++++.+.+
T Consensus 136 ~~pe~~~~G~~p~~g~~~~l~~~vG~~-~a~~l~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a--------------- 198 (262)
T PRK06144 136 GFPIARTLGNCLSMSNLARLVALLGAA-RVKDMLFTARLLE-AEEALAAGLVNEVVEDAALDARA--------------- 198 (262)
T ss_pred echhHHhccCCCCccHHHHHHHHhCHH-HHHHHHHcCCCcC-HHHHHHcCCcCeecCHHHHHHHH---------------
Confidence 999997 99999999999999999998 9999999999999 99999999999999988777655
Q ss_pred HHHHHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHH
Q 019602 177 IVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFS 256 (338)
Q Consensus 177 ~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~ 256 (338)
.+||+ +|+..||.+++.+|+.++
T Consensus 199 -----------------------------------------------------~~~a~----~i~~~~~~a~~~~K~~l~ 221 (262)
T PRK06144 199 -----------------------------------------------------DALAE----LLAAHAPLTLRATKEALR 221 (262)
T ss_pred -----------------------------------------------------HHHHH----HHHhCCHHHHHHHHHHHH
Confidence 25667 999999999999999998
Q ss_pred HHhhhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCCCCCCCCCC
Q 019602 257 KVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNP 311 (338)
Q Consensus 257 ~~~~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK~r~p~w~~ 311 (338)
... ...+ +.+.+.+..++.++|++||+++|+ +| |+|.|.+
T Consensus 222 ~~~---------~~~l----~~~~~~~~~~~~~~~~~e~~~af~-~k-r~p~~~~ 261 (262)
T PRK06144 222 RLR---------REGL----PDGDDLIRMCYMSEDFREGVEAFL-EK-RPPKWKG 261 (262)
T ss_pred Hhh---------hcCH----HHHHHHHHHHhcChHHHHHHHHHh-cC-CCCCCCC
Confidence 765 3344 334556777889999999999999 78 8999975
No 49
>PRK08260 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.9e-39 Score=307.48 Aligned_cols=209 Identities=17% Similarity=0.185 Sum_probs=171.5
Q ss_pred CCCCeEEcCCChhHHhhhhccC------------C-hHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcC
Q 019602 20 FPNNAVICGQSPLNHLQSTTQN------------Q-LSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHG 86 (338)
Q Consensus 20 ~~~~~F~aG~Dl~~~~~~~~~~------------~-~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~c 86 (338)
..|++||+|+|+.++....... . ......+......++.+|..+||||||+|||+|+|||++|+++|
T Consensus 56 g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pkPvIAav~G~a~GgG~~Lalac 135 (296)
T PRK08260 56 GAGRAFCAGADLSAGGNTFDLDAPRTPVEADEEDRADPSDDGVRDGGGRVTLRIFDSLKPVIAAVNGPAVGVGATMTLAM 135 (296)
T ss_pred CCCCCeecCcChHHhhhcccccccccccccccccccchhHHHHHHHHHHHHHHHHhCCCCEEEEECCeeehHhHHHHHhC
Confidence 3578999999999874211000 0 01111222333457788999999999999999999999999999
Q ss_pred CeEEEeCCeEEeCCCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHh
Q 019602 87 RYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLA 166 (338)
Q Consensus 87 D~rias~~a~f~~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~ 166 (338)
|+|||+++++|++||+++|++|++|++++|++++|.+ ++++|+++|++++ |+||+++||||+|||++++.+.+
T Consensus 136 D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~-~A~~llltg~~~~-a~eA~~~GLv~~vv~~~~l~~~a----- 208 (296)
T PRK08260 136 DIRLASTAARFGFVFGRRGIVPEAASSWFLPRLVGLQ-TALEWVYSGRVFD-AQEALDGGLVRSVHPPDELLPAA----- 208 (296)
T ss_pred CEEEeeCCCEEecchhhcCcCCCcchhhhHHHhhCHH-HHHHHHHcCCccC-HHHHHHCCCceeecCHHHHHHHH-----
Confidence 9999999999999999999999999999999999998 9999999999999 99999999999999987776654
Q ss_pred cccCCCchhHHHHHHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhcc-Cc
Q 019602 167 VTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKG-AP 245 (338)
Q Consensus 167 ~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~-sp 245 (338)
.++|+ +|..+ ||
T Consensus 209 ---------------------------------------------------------------~~~a~----~i~~~~~~ 221 (296)
T PRK08260 209 ---------------------------------------------------------------RALAR----EIADNTSP 221 (296)
T ss_pred ---------------------------------------------------------------HHHHH----HHHhcCCh
Confidence 24666 88885 99
Q ss_pred hHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCCCCCCCCCCC
Q 019602 246 FSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPA 312 (338)
Q Consensus 246 ~al~~~k~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK~r~p~w~~~ 312 (338)
.+++.+|++++.... ....+.. ...|...+..++.++|++||+++|+ +| |+|.|+++
T Consensus 222 ~a~~~~K~~l~~~~~-------~~~~~~~-~~~e~~~~~~~~~~~d~~egi~af~-~k-r~p~f~~~ 278 (296)
T PRK08260 222 VSVALTRQMMWRMAG-------ADHPMEA-HRVDSRAIYSRGRSGDGKEGVSSFL-EK-RPAVFPGK 278 (296)
T ss_pred HHHHHHHHHHHhccc-------CCCcHHH-HHHHHHHHHHHccChhHHHHHHHHh-cC-CCCCCCCC
Confidence 999999999987640 0123343 3567778888899999999999999 78 89999886
No 50
>PRK07396 dihydroxynaphthoic acid synthetase; Validated
Probab=100.00 E-value=5.4e-39 Score=301.14 Aligned_cols=204 Identities=16% Similarity=0.162 Sum_probs=170.9
Q ss_pred cCCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEe
Q 019602 19 SFPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLA 98 (338)
Q Consensus 19 s~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~ 98 (338)
+.++++||+|+||.++..... .+.... ..+ ....++..+..+||||||+|||+|+|||++|+++||+||++++++|+
T Consensus 65 g~g~~~F~aG~Dl~~~~~~~~-~~~~~~-~~~-~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~ 141 (273)
T PRK07396 65 GAGDKAFCSGGDQKVRGYGGY-VDDDGV-PRL-NVLDLQRLIRTCPKPVIAMVAGYAIGGGHVLHLVCDLTIAADNAIFG 141 (273)
T ss_pred eCCCCceEeCcChhhhhcccc-cchhhh-hhh-HHHHHHHHHHhCCCCEEEEECCEEehHHHHHHHhCCEEEeeCCcEEe
Confidence 333369999999998642110 111111 111 12346778999999999999999999999999999999999999999
Q ss_pred CCCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHHH
Q 019602 99 MPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIV 178 (338)
Q Consensus 99 ~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~ 178 (338)
+||+++|++|++|++.+|++++|.+ ++++|++||+.++ |+||+++||||+|||++++.+.+
T Consensus 142 ~pe~~~Gl~p~~~~~~~l~~~vG~~-~a~~l~ltg~~~~-A~eA~~~GLv~~vv~~~~l~~~a----------------- 202 (273)
T PRK07396 142 QTGPKVGSFDGGYGASYLARIVGQK-KAREIWFLCRQYD-AQEALDMGLVNTVVPLADLEKET----------------- 202 (273)
T ss_pred cccccccccCCchHHHHHHHHhhHH-HHHHHHHhCCCcC-HHHHHHcCCcCeecCHHHHHHHH-----------------
Confidence 9999999999999999999999998 9999999999999 99999999999999988777755
Q ss_pred HHHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHHH
Q 019602 179 ALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKV 258 (338)
Q Consensus 179 ~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~~ 258 (338)
.+||+ +|+..||.+++.+|++++..
T Consensus 203 ---------------------------------------------------~~~a~----~la~~~~~a~~~~K~~l~~~ 227 (273)
T PRK07396 203 ---------------------------------------------------VRWCR----EMLQNSPMALRCLKAALNAD 227 (273)
T ss_pred ---------------------------------------------------HHHHH----HHHhCCHHHHHHHHHHHHhh
Confidence 35677 99999999999999999876
Q ss_pred hhhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCCCCCCCCCC
Q 019602 259 ASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNP 311 (338)
Q Consensus 259 ~~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK~r~p~w~~ 311 (338)
. . .++...+.|...+..++.++|++||+++|+ +| |+|+|.+
T Consensus 228 ~---------~-~~~~~~~~e~~~~~~~~~~~d~~egi~af~-~k-r~p~~~~ 268 (273)
T PRK07396 228 C---------D-GQAGLQELAGNATMLFYMTEEAQEGRNAFN-EK-RQPDFSK 268 (273)
T ss_pred h---------c-cHHHHHHHHHHHHHHHhcChhHHHHHHHHh-CC-CCCCCCC
Confidence 5 2 355666677788888999999999999999 78 8999986
No 51
>PRK07509 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=3.5e-39 Score=300.56 Aligned_cols=203 Identities=19% Similarity=0.186 Sum_probs=172.6
Q ss_pred CCCCeEEcCCChhHHhhhhccCChHHHHHH----HHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCe
Q 019602 20 FPNNAVICGQSPLNHLQSTTQNQLSEMIEV----FTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKT 95 (338)
Q Consensus 20 ~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a 95 (338)
..|++||+|+|+.++... ........... .....+++.++..+||||||+|||+|+|||++|+++||+|||++++
T Consensus 55 g~g~~F~aG~Dl~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kpvIaav~G~a~GgG~~lalacD~~ia~~~a 133 (262)
T PRK07509 55 GEGGAFCAGLDVKSVASS-PGNAVKLLFKRLPGNANLAQRVSLGWRRLPVPVIAALEGVCFGGGLQIALGADIRIAAPDT 133 (262)
T ss_pred CCCCCcCCCcCHHHHhcc-cchhhhhHhhhhHHHHHHHHHHHHHHHhCCCCEEEEECCeeecchHHHHHhCCEEEecCCC
Confidence 457899999999987532 11111111111 1223346677889999999999999999999999999999999999
Q ss_pred EEeCCCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchh
Q 019602 96 LLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQ 175 (338)
Q Consensus 96 ~f~~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~ 175 (338)
+|++||+++|++|++|+++++++++|++ ++++|++||++++ |+||+++||||+++++ +.+.+
T Consensus 134 ~f~~pe~~~Gl~p~~g~~~~l~~~~g~~-~a~~l~ltg~~~~-a~eA~~~Glv~~vv~~--~~~~a-------------- 195 (262)
T PRK07509 134 KLSIMEAKWGLVPDMAGTVSLRGLVRKD-VARELTYTARVFS-AEEALELGLVTHVSDD--PLAAA-------------- 195 (262)
T ss_pred EeecchhccCCCCCchHHHHHHHHhCHH-HHHHHHHcCCCcC-HHHHHHcCChhhhhch--HHHHH--------------
Confidence 9999999999999999999999999998 9999999999999 9999999999999853 33322
Q ss_pred HHHHHHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHH
Q 019602 176 DIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYF 255 (338)
Q Consensus 176 ~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l 255 (338)
.+||+ +|+..||.+++.+|+++
T Consensus 196 ------------------------------------------------------~~~a~----~l~~~~~~~~~~~K~~l 217 (262)
T PRK07509 196 ------------------------------------------------------LALAR----EIAQRSPDAIAAAKRLI 217 (262)
T ss_pred ------------------------------------------------------HHHHH----HHHhCCHHHHHHHHHHH
Confidence 35677 89999999999999999
Q ss_pred HHHhhhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCCCCCCCCC
Q 019602 256 SKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWN 310 (338)
Q Consensus 256 ~~~~~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK~r~p~w~ 310 (338)
+... ..++.+.+..|.+.+..++.++|++||+++|+ +| |+|.|.
T Consensus 218 ~~~~---------~~~~~~~~~~e~~~~~~~~~~~d~~e~~~af~-ek-r~p~~~ 261 (262)
T PRK07509 218 NRSW---------TASVRALLARESVEQIRLLLGKNQKIAVKAQM-KK-RAPKFL 261 (262)
T ss_pred HHHh---------cCCHHHHHHHHHHHHHHHhcChhHHHHHHHHh-cC-CCCCCC
Confidence 9887 67899999999999999999999999999999 78 899996
No 52
>TIGR03189 dienoyl_CoA_hyt cyclohexa-1,5-dienecarbonyl-CoA hydratase. This enzyme, cyclohexa-1,5-dienecarbonyl-CoA hydratase, also called dienoyl-CoA hydratase, acts on the product of benzoyl-CoA reductase (EC 1.3.99.15). Benzoyl-CoA is a common intermediate in the degradation of many aromatic compounds, and this enzyme is part of an anaerobic pathway for dearomatization and degradation.
Probab=100.00 E-value=1.1e-38 Score=295.71 Aligned_cols=197 Identities=17% Similarity=0.234 Sum_probs=166.9
Q ss_pred CCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeC
Q 019602 20 FPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAM 99 (338)
Q Consensus 20 ~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~ 99 (338)
..|++||+|+|+.++.. . ....++....+++.++..+||||||+|||+|+|||++|+++||+||++++++|++
T Consensus 52 g~g~~FcaG~Dl~~~~~----~---~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~ 124 (251)
T TIGR03189 52 AEGPHFSFGASVAEHMP----D---QCAAMLASLHKLVIAMLDSPVPILVAVRGQCLGGGLEVAAAGNLMFAAPDAKLGQ 124 (251)
T ss_pred CCCCceecCcChhhhCc----h---hHHHHHHHHHHHHHHHHhCCCCEEEEecCeeeeHHHHHHHhCCEEEEcCCCEEeC
Confidence 45789999999987531 1 1122334445678889999999999999999999999999999999999999999
Q ss_pred CCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHHHH
Q 019602 100 PENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVA 179 (338)
Q Consensus 100 pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~ 179 (338)
||+++|++|++ ++++|++++|++ ++++|++||++++ |+||+++|||++++++.+ +.+
T Consensus 125 pe~~~Gl~p~~-~~~~l~~~vg~~-~a~~l~ltg~~~~-a~eA~~~Glv~~v~~~~~--~~a------------------ 181 (251)
T TIGR03189 125 PEIVLGVFAPA-ASCLLPERMGRV-AAEDLLYSGRSID-GAEGARIGLANAVAEDPE--NAA------------------ 181 (251)
T ss_pred chhhcCCCCCc-hHHHHHHHhCHH-HHHHHHHcCCCCC-HHHHHHCCCcceecCcHH--HHH------------------
Confidence 99999999874 577999999998 9999999999999 999999999999997432 221
Q ss_pred HHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHH-HHHHHHHHhccCchHHHHHHHHHHHH
Q 019602 180 LLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQW-ADEALQGMGKGAPFSLCLTQKYFSKV 258 (338)
Q Consensus 180 ~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~-A~~~~~~l~~~sp~al~~~k~~l~~~ 258 (338)
.++ ++ +++..||.+++.+|++++..
T Consensus 182 --------------------------------------------------~~~~a~----~la~~~p~a~~~~K~~l~~~ 207 (251)
T TIGR03189 182 --------------------------------------------------LAWFDE----HPAKLSASSLRFAVRAARLG 207 (251)
T ss_pred --------------------------------------------------HHHHHH----HHHhCCHHHHHHHHHHHHhh
Confidence 123 45 89999999999999999987
Q ss_pred hhhcCCCccccCCHHHHH-HHHHHHHhhhCCCCCHHHHHHhhhcCCCCCCCCCC
Q 019602 259 ASAHGKTDNELSKLSGVM-KYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNP 311 (338)
Q Consensus 259 ~~~~~~~~~~~~~l~~~l-~~e~~~~~~~~~~~d~~eg~~afl~eK~r~p~w~~ 311 (338)
. ..++++.+ ..|...+..++.++|++||+++|+ +| |+|.|.+
T Consensus 208 ~---------~~~~~~~~~~~e~~~~~~~~~s~d~~eg~~af~-ek-r~p~~~~ 250 (251)
T TIGR03189 208 M---------NERVKAKIAEVEALYLEELMATHDAVEGLNAFL-EK-RPALWED 250 (251)
T ss_pred h---------cccHHHHHHHHHHHHHHHHhCCHhHHHHHHHHH-hc-CCCCCCC
Confidence 6 56787766 477778888999999999999999 78 8999975
No 53
>PRK07938 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.4e-38 Score=294.49 Aligned_cols=197 Identities=14% Similarity=0.190 Sum_probs=169.6
Q ss_pred CCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeC
Q 019602 20 FPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAM 99 (338)
Q Consensus 20 ~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~ 99 (338)
..|++||+|+|+.++... .+.............++..|.++||||||+|||+|+|||++|+++||+||++++++|++
T Consensus 53 g~G~~F~aG~Dl~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~kPvIAav~G~a~GgG~~Lal~cD~ria~~~a~f~~ 129 (249)
T PRK07938 53 AEGRGFNAGVDIKELQAT---PGFTALIDANRGCFAAFRAVYECAVPVIAAVHGFCLGGGIGLVGNADVIVASDDATFGL 129 (249)
T ss_pred CCCCceecCcCHHHHhhc---cchhHHHHHHHHHHHHHHHHHhCCCCEEEEEcCEEeehHHHHHHhCCEEEEeCCCEeeC
Confidence 367899999999987521 11111222233445677889999999999999999999999999999999999999999
Q ss_pred CCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHHHH
Q 019602 100 PENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVA 179 (338)
Q Consensus 100 pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~ 179 (338)
||+++|++ |++++|++++|++ ++++|+++|++++ |+||+++|||+++||++++.+.+
T Consensus 130 pe~~~G~~---g~~~~l~~~vg~~-~a~~l~ltg~~~~-a~eA~~~Glv~~vv~~~~l~~~a------------------ 186 (249)
T PRK07938 130 PEVDRGAL---GAATHLQRLVPQH-LMRALFFTAATIT-AAELHHFGSVEEVVPRDQLDEAA------------------ 186 (249)
T ss_pred ccceecCc---hhHHHHHHhcCHH-HHHHHHHhCCcCC-HHHHHHCCCccEEeCHHHHHHHH------------------
Confidence 99999986 4567899999998 9999999999999 99999999999999988877755
Q ss_pred HHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHHHh
Q 019602 180 LLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVA 259 (338)
Q Consensus 180 ~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~~~ 259 (338)
.+||+ +|+..||.+++.+|++++...
T Consensus 187 --------------------------------------------------~~~a~----~la~~~~~a~~~~K~~l~~~~ 212 (249)
T PRK07938 187 --------------------------------------------------LEVAR----KIAAKDTRVIRAAKEALNGID 212 (249)
T ss_pred --------------------------------------------------HHHHH----HHHhCCHHHHHHHHHHHHhhc
Confidence 35677 899999999999999999876
Q ss_pred hhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCCCCCC
Q 019602 260 SAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNP 307 (338)
Q Consensus 260 ~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK~r~p 307 (338)
..++++.++.|...+..++.++|++||+++|+ +| |+|
T Consensus 213 ---------~~~l~~~~~~e~~~~~~~~~~~d~~eg~~af~-ek-r~p 249 (249)
T PRK07938 213 ---------PQDVERSYRWEQGFTFELNLAGVSDEHRDAFV-EK-RKA 249 (249)
T ss_pred ---------cCCHHHHHHHHHHHHHHHhcCccHHHHHHHHH-hc-CCC
Confidence 67789999999999999999999999999999 78 666
No 54
>PRK06072 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.2e-38 Score=294.84 Aligned_cols=197 Identities=22% Similarity=0.252 Sum_probs=170.4
Q ss_pred CCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeC
Q 019602 20 FPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAM 99 (338)
Q Consensus 20 ~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~ 99 (338)
..|++||+|+|++++... . ...+....+.++..+..+||||||+|||+|+|||++|+++||+|||+++++|++
T Consensus 52 g~g~~F~aG~Dl~~~~~~----~---~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~ 124 (248)
T PRK06072 52 GEGRAFCVGADLSEFAPD----F---AIDLRETFYPIIREIRFSDKIYISAINGVTAGACIGIALSTDFKFASRDVKFVT 124 (248)
T ss_pred CCCCCcccCcCHHHHhhh----h---HHHHHHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEec
Confidence 357899999999987521 1 112333445678889999999999999999999999999999999999999999
Q ss_pred CCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHHHH
Q 019602 100 PENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVA 179 (338)
Q Consensus 100 pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~ 179 (338)
||+++|++|++|+++++++++| . +++++++||++++ |+||+++||||++ +++.+.+
T Consensus 125 ~~~~~Gl~p~~g~~~~l~~~~g-~-~a~~lll~g~~~~-a~eA~~~Glv~~~---~~~~~~a------------------ 180 (248)
T PRK06072 125 AFQRLGLASDTGVAYFLLKLTG-Q-RFYEILVLGGEFT-AEEAERWGLLKIS---EDPLSDA------------------ 180 (248)
T ss_pred chhhcCcCCCchHHHHHHHHhh-H-HHHHHHHhCCccC-HHHHHHCCCcccc---chHHHHH------------------
Confidence 9999999999999999999999 4 8999999999999 9999999999953 2333322
Q ss_pred HHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHHHh
Q 019602 180 LLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVA 259 (338)
Q Consensus 180 ~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~~~ 259 (338)
.++|+ +|+..||.+++.+|++++...
T Consensus 181 --------------------------------------------------~~~a~----~la~~~~~a~~~~K~~l~~~~ 206 (248)
T PRK06072 181 --------------------------------------------------EEMAN----RISNGPFQSYIAAKRMINLVL 206 (248)
T ss_pred --------------------------------------------------HHHHH----HHHhCCHHHHHHHHHHHHHHh
Confidence 35666 999999999999999999876
Q ss_pred hhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCCCCCCCCCCC
Q 019602 260 SAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPA 312 (338)
Q Consensus 260 ~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK~r~p~w~~~ 312 (338)
..++++.++.|.+.+..++.++|++||+++|+ +| |+|.|.++
T Consensus 207 ---------~~~l~~~~~~e~~~~~~~~~~~d~~eg~~af~-~k-r~p~~~~~ 248 (248)
T PRK06072 207 ---------YNDLEEFLEYESAIQGYLGKTEDFKEGISSFK-EK-REPKFKGI 248 (248)
T ss_pred ---------hcCHHHHHHHHHHHHHHHhCChhHHHHHHHHh-cC-CCCCCCCC
Confidence 67899999999999999999999999999999 78 89999764
No 55
>COG1024 CaiD Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism]
Probab=100.00 E-value=2.5e-38 Score=294.12 Aligned_cols=200 Identities=25% Similarity=0.339 Sum_probs=174.1
Q ss_pred CCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeC
Q 019602 20 FPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAM 99 (338)
Q Consensus 20 ~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~ 99 (338)
+.|++||+|+||..+.. ..+......++...+.++.++.++||||||+|||+|+|||++|+++||+|||+++++|++
T Consensus 57 g~g~~FsaG~Dl~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~eLal~~D~ria~~~a~f~~ 133 (257)
T COG1024 57 GAGKAFSAGADLKELLS---PEDGNAAENLMQPGQDLLRALADLPKPVIAAVNGYALGGGLELALACDIRIAAEDAKFGL 133 (257)
T ss_pred CCCCceecccCHHHHhc---ccchhHHHHHHhHHHHHHHHHHhCCCCEEEEEcceEeechhhhhhcCCeEEecCCcEecC
Confidence 34599999999999874 111112225566677799999999999999999999999999999999999999999999
Q ss_pred CCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCC-CChHHHHHHHHhcccCCCchhHHH
Q 019602 100 PENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPS-GNLGSLKEALLAVTFSEDPHQDIV 178 (338)
Q Consensus 100 pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~-~~l~~~~~~l~~~~~~~~~~~~~~ 178 (338)
||+++|++|++|++++++|++|+. .+++|++||+.++ ++||+++|||+++++. +++.+.+.
T Consensus 134 pe~~iGl~Pg~g~~~~l~r~~G~~-~a~~l~ltg~~~~-a~eA~~~Glv~~vv~~~~~l~~~a~---------------- 195 (257)
T COG1024 134 PEVNLGLLPGDGGTQRLPRLLGRG-RAKELLLTGEPIS-AAEALELGLVDEVVPDAEELLERAL---------------- 195 (257)
T ss_pred cccccccCCCCcHHHHHHHhcCHH-HHHHHHHcCCcCC-HHHHHHcCCcCeeeCCHHHHHHHHH----------------
Confidence 999999999889999999999998 9999999999999 9999999999999985 56666553
Q ss_pred HHHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHHH
Q 019602 179 ALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKV 258 (338)
Q Consensus 179 ~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~~ 258 (338)
++++ +++. ||.+++.+|+.++..
T Consensus 196 ----------------------------------------------------~~a~----~~a~-~~~a~~~~k~~~~~~ 218 (257)
T COG1024 196 ----------------------------------------------------ELAR----RLAA-PPLALAATKRLVRAA 218 (257)
T ss_pred ----------------------------------------------------HHHH----HHcc-CHHHHHHHHHHHHHh
Confidence 4555 5555 999999999999988
Q ss_pred hhhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCCCCCCCC
Q 019602 259 ASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKW 309 (338)
Q Consensus 259 ~~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK~r~p~w 309 (338)
. ..++++.+..|...+...+.++|++||+++|+ + |+|.|
T Consensus 219 ~---------~~~l~~~~~~~~~~~~~~~~~~d~~eg~~a~~-~--r~p~~ 257 (257)
T COG1024 219 L---------EADLAEALEAEALAFARLFSSEDFREGVRAFL-E--RKPVF 257 (257)
T ss_pred h---------hccHHHHHHHHHHHHHHHhcChhHHHHHHHHH-c--cCCCC
Confidence 7 44599999999999888888999999999999 4 68887
No 56
>PF00378 ECH: Enoyl-CoA hydratase/isomerase family; InterPro: IPR001753 The crotonase superfamily is comprised of mechanistically diverse proteins that share a conserved trimeric quaternary structure (sometimes a hexamer consisting of a dimer of trimers), the core of which consists of 4 turns of a (beta/beta/alpha)n superhelix. Some enzymes in the superfamily have been shown to display dehalogenase, hydratase, and isomerase activities, while others have been implicated in carbon-carbon bond formation and cleavage as well as the hydrolysis of thioesters []. However, these different enzymes share the need to stabilise an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two structurally conserved peptidic NH groups that provide hydrogen bonds to the carbonyl moieties of the acyl-CoA substrates and form an "oxyanion hole". The CoA thioester derivatives bind in a characteristic hooked shape and a conserved tunnel binds the pantetheine group of CoA, which links the 3'-phosphate ADP binding site to the site of reaction []. Enzymes in the crotonase superfamily include: Enoyl-CoA hydratase (crotonase; 4.2.1.17 from EC), which catalyses the hydratation of 2-trans-enoyl-CoA into 3-hydroxyacyl-CoA []. 3-2trans-enoyl-CoA isomerase (or dodecenoyl-CoA isomerise; 5.3.3.8 from EC), which shifts the 3-double bond of the intermediates of unsaturated fatty acid oxidation to the 2-trans position []. 3-hydroxbutyryl-CoA dehydratase (crotonase; 4.2.1.55 from EC), a bacterial enzyme involved in the butyrate/butanol-producing pathway. 4-Chlorobenzoyl-CoA dehalogenase (3.8.1.6 from EC), a Pseudomonas enzyme which catalyses the conversion of 4-chlorobenzoate-CoA to 4-hydroxybenzoate-CoA []. Dienoyl-CoA isomerise, which catalyses the isomerisation of 3-trans,5-cis-dienoyl-CoA to 2-trans,4-trans-dienoyl-CoA []. Naphthoate synthase (MenB, or DHNA synthetase; 4.1.3.36 from EC), a bacterial enzyme involved in the biosynthesis of menaquinone (vitamin K2) []. Carnitine racemase (gene caiD), which catalyses the reversible conversion of crotonobetaine to L-carnitine in Escherichia coli []. Methylmalonyl CoA decarboxylase (MMCD; 4.1.1.41 from EC), which has a hexameric structure (dimer of trimers) []. Carboxymethylproline synthase (CarB), which is involved in carbapenem biosynthesis []. 6-oxo camphor hydrolase, which catalyses the desymmetrisation of bicyclic beta-diketones to optically active keto acids []. The alpha subunit of fatty oxidation complex, a multi-enzyme complex that catalyses the last three reactions in the fatty acid beta-oxidation cycle []. AUH protein, a bifunctional RNA-binding homologue of enoyl-CoA hydratase []. This entry represents the core domain found in crotonase superfamily members.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2VRE_B 3RSI_A 1HZD_F 2ZQR_E 2ZQQ_D 3R9S_C 1O8U_E 1SZO_C 3MOY_A 2UZF_A ....
Probab=100.00 E-value=3.1e-39 Score=297.87 Aligned_cols=198 Identities=26% Similarity=0.370 Sum_probs=180.7
Q ss_pred ccCCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEE
Q 019602 18 SSFPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLL 97 (338)
Q Consensus 18 ~s~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f 97 (338)
.+..+++||+|+|+.++... +.+....+....+.++.++..+||||||+|||+|+|||++|+++||+|||+++++|
T Consensus 48 ~~~~~~~F~~G~Dl~~~~~~----~~~~~~~~~~~~~~l~~~l~~~~kp~Iaav~G~a~GgG~~lala~D~~ia~~~a~f 123 (245)
T PF00378_consen 48 ISGGGKAFCAGADLKEFLNS----DEEEAREFFRRFQELLSRLANFPKPTIAAVNGHAVGGGFELALACDFRIAAEDAKF 123 (245)
T ss_dssp EEESTSESBESB-HHHHHHH----HHHHHHHHHHHHHHHHHHHHHSSSEEEEEESSEEETHHHHHHHHSSEEEEETTTEE
T ss_pred Eeecccccccccchhhhhcc----ccccccccchhhccccccchhhhhheeecccccccccccccccccceEEeecccce
Confidence 35578899999999998754 33455677788888999999999999999999999999999999999999999999
Q ss_pred eCCCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHH
Q 019602 98 AMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDI 177 (338)
Q Consensus 98 ~~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~ 177 (338)
++||+++|++|++|++++|++++|++ .+++++++|+.++ |+||+++||||+++|++++.+.+.
T Consensus 124 ~~pe~~~G~~p~~g~~~~l~r~~g~~-~a~~l~l~g~~~~-a~eA~~~Glv~~v~~~~~l~~~a~--------------- 186 (245)
T PF00378_consen 124 GFPEVRLGIFPGAGGTFRLPRLIGPS-RARELLLTGEPIS-AEEALELGLVDEVVPDEELDEEAL--------------- 186 (245)
T ss_dssp ETGGGGGTSSSTSTHHHHHHHHHHHH-HHHHHHHHTCEEE-HHHHHHTTSSSEEESGGGHHHHHH---------------
T ss_pred eeeecccCcccccccccccceeeecc-cccccccccccch-hHHHHhhcceeEEcCchhhhHHHH---------------
Confidence 99999999999999999999999998 9999999999999 999999999999999988777653
Q ss_pred HHHHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHH
Q 019602 178 VALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSK 257 (338)
Q Consensus 178 ~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~ 257 (338)
++++ +++..||.+++.+|+.+++
T Consensus 187 -----------------------------------------------------~~a~----~l~~~~~~a~~~~K~~~~~ 209 (245)
T PF00378_consen 187 -----------------------------------------------------ELAK----RLAAKPPSALRATKKALNR 209 (245)
T ss_dssp -----------------------------------------------------HHHH----HHHTSCHHHHHHHHHHHHH
T ss_pred -----------------------------------------------------HHHH----HHhcCCHHHHHHHHHHHHH
Confidence 4666 9999999999999999999
Q ss_pred HhhhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCC
Q 019602 258 VASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDK 303 (338)
Q Consensus 258 ~~~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK 303 (338)
.. ...+.+.+..|.+.+..++.++|++||+++|+ ||
T Consensus 210 ~~---------~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~f~-eK 245 (245)
T PF00378_consen 210 AL---------EQSLEEALEFEQDLFAECFKSEDFQEGIAAFL-EK 245 (245)
T ss_dssp HH---------HSHHHHHHHHHHHHHHHHHTSHHHHHHHHHHH-TT
T ss_pred HH---------HhhHHHHHHHHHHHHHHHcCCHHHHHHHHHHh-Cc
Confidence 87 67899999999999999999999999999999 66
No 57
>PLN02888 enoyl-CoA hydratase
Probab=100.00 E-value=1.1e-38 Score=297.92 Aligned_cols=199 Identities=14% Similarity=0.124 Sum_probs=170.5
Q ss_pred CCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeC
Q 019602 20 FPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAM 99 (338)
Q Consensus 20 ~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~ 99 (338)
..|++||+|+|+.++.... ..+ .. .....++..|..+||||||+|||+|+|||++|+++||+|||+++++|++
T Consensus 62 g~g~~F~aG~Dl~~~~~~~-~~~---~~---~~~~~~~~~i~~~~kPvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~ 134 (265)
T PLN02888 62 GSGRAFCSGVDLTAAEEVF-KGD---VK---DVETDPVAQMERCRKPIIGAINGFAITAGFEIALACDILVASRGAKFID 134 (265)
T ss_pred CCCCcccCCCCHHHHHhhc-cch---hh---HHHHHHHHHHHhCCCCEEEEECCeeechHHHHHHhCCEEEecCCCEecC
Confidence 3568999999999864211 111 11 1123456678999999999999999999999999999999999999999
Q ss_pred CCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHHHH
Q 019602 100 PENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVA 179 (338)
Q Consensus 100 pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~ 179 (338)
||+++|++|++|++++|++++|++ ++++|++||++++ |+||+++||||++||++++.+.+
T Consensus 135 pe~~~Gl~p~~g~~~~l~~~vG~~-~a~~l~ltg~~~~-a~eA~~~Glv~~vv~~~~l~~~a------------------ 194 (265)
T PLN02888 135 THAKFGIFPSWGLSQKLSRIIGAN-RAREVSLTAMPLT-AETAERWGLVNHVVEESELLKKA------------------ 194 (265)
T ss_pred ccccccCCCCccHhhHHHHHhCHH-HHHHHHHhCCccC-HHHHHHcCCccEeeChHHHHHHH------------------
Confidence 999999999999999999999998 9999999999999 99999999999999988776654
Q ss_pred HHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHHHh
Q 019602 180 LLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVA 259 (338)
Q Consensus 180 ~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~~~ 259 (338)
.++|+ +|+..+|.+++.+|++++...
T Consensus 195 --------------------------------------------------~~~a~----~la~~~~~a~~~~K~~l~~~~ 220 (265)
T PLN02888 195 --------------------------------------------------REVAE----AIIKNNQGMVLRYKSVINDGL 220 (265)
T ss_pred --------------------------------------------------HHHHH----HHHhCCHHHHHHHHHHHHHhh
Confidence 35666 999999999999999999877
Q ss_pred hhcCCCccccCCHHHHHHHHHHHHhhhC--CCCCHHHHHHhhhcCCCCCCCCC
Q 019602 260 SAHGKTDNELSKLSGVMKYEYRVALRSS--LRSDFAEGVRAVLVDKDQNPKWN 310 (338)
Q Consensus 260 ~~~~~~~~~~~~l~~~l~~e~~~~~~~~--~~~d~~eg~~afl~eK~r~p~w~ 310 (338)
..++++.+..|...+..++ .++|++||+++|+ +| |+|+-.
T Consensus 221 ---------~~~~~~~~~~e~~~~~~~~~~~~~d~~e~~~af~-ek-r~~~~~ 262 (265)
T PLN02888 221 ---------KLDLGHALQLEKERAHDYYNGMTKEQFQKMQEFI-AG-RSSKKP 262 (265)
T ss_pred ---------cCCHHHHHHHHHHHHHHHhccCCHHHHHHHHHHH-hc-CCCCCC
Confidence 6789999999988777765 5999999999999 68 666533
No 58
>PRK05870 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=6.2e-39 Score=296.93 Aligned_cols=192 Identities=17% Similarity=0.187 Sum_probs=168.3
Q ss_pred CCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeC
Q 019602 20 FPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAM 99 (338)
Q Consensus 20 ~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~ 99 (338)
..|++||+|+|++++..... .+ ..+.+...+.++..+.++||||||+|||+|+|||++|+++||+|||+++++|++
T Consensus 55 g~g~~F~aG~Dl~~~~~~~~-~~---~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~ 130 (249)
T PRK05870 55 GAGKAFCAGADLTALGAAPG-RP---AEDGLRRIYDGFLAVASCPLPTIAAVNGAAVGAGLNLALAADVRIAGPKALFDA 130 (249)
T ss_pred CCCCCeecCcChHHHhcccc-cc---hHHHHHHHHHHHHHHHhCCCCEEEEECCEeEchhHHHHHhCCEEEEcCCCEEeC
Confidence 35789999999998763211 11 122334445667789999999999999999999999999999999999999999
Q ss_pred CCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHHHH
Q 019602 100 PENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVA 179 (338)
Q Consensus 100 pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~ 179 (338)
||+++|++|++|++++|++++|++ ++++|++||++++ |+||+++||||+++ +++.+.+
T Consensus 131 pe~~~G~~p~~g~~~~l~~~~G~~-~a~~l~ltg~~~~-a~eA~~~Glv~~vv--~~l~~~a------------------ 188 (249)
T PRK05870 131 RFQKLGLHPGGGATWMLQRAVGPQ-VARAALLFGMRFD-AEAAVRHGLALMVA--DDPVAAA------------------ 188 (249)
T ss_pred cccccCcCCCCcceeeHHhhhCHH-HHHHHHHhCCccC-HHHHHHcCCHHHHH--hhHHHHH------------------
Confidence 999999999999999999999998 9999999999999 99999999999999 4555544
Q ss_pred HHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHHHh
Q 019602 180 LLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVA 259 (338)
Q Consensus 180 ~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~~~ 259 (338)
.+||+ +|+..||.+++.+|++++...
T Consensus 189 --------------------------------------------------~~~a~----~la~~~~~a~~~~K~~~~~~~ 214 (249)
T PRK05870 189 --------------------------------------------------LELAA----GPAAAPRELVLATKASMRATA 214 (249)
T ss_pred --------------------------------------------------HHHHH----HHHhCCHHHHHHHHHHHHhcc
Confidence 35677 999999999999999999876
Q ss_pred hhcCCCcccc-CCHHHHHHHHHHHHhhhCCCCCHHHHHHhhh
Q 019602 260 SAHGKTDNEL-SKLSGVMKYEYRVALRSSLRSDFAEGVRAVL 300 (338)
Q Consensus 260 ~~~~~~~~~~-~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl 300 (338)
. .++++.+..|.+.+..++.++|++||+++|+
T Consensus 215 ---------~~~~l~~~~~~e~~~~~~~~~~~d~~eg~~af~ 247 (249)
T PRK05870 215 ---------SLAQHAAAVEFELGPQAASVQSPEFAARLAAAQ 247 (249)
T ss_pred ---------ccCCHHHHHHHHHHHHHHHhcChhHHHHHHHHh
Confidence 5 6799999999999999999999999999999
No 59
>PLN02921 naphthoate synthase
Probab=100.00 E-value=3.7e-38 Score=301.67 Aligned_cols=204 Identities=17% Similarity=0.167 Sum_probs=168.8
Q ss_pred cCCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEe
Q 019602 19 SFPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLA 98 (338)
Q Consensus 19 s~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~ 98 (338)
+.+.++||+|+|+..+.... .........+ ....++.+|..+||||||+|||+|+|||++|+++||+|||+++++|+
T Consensus 119 g~G~k~FcaG~Dl~~~~~~~-~~~~~~~~~~--~~~~l~~~l~~~~kPvIAaVnG~a~GGG~~LalacD~riA~~~A~f~ 195 (327)
T PLN02921 119 GKGTKAFCSGGDQAVRGKDG-YVGPDDAGRL--NVLDLQIQIRRLPKPVIAMVAGYAVGGGHILHMVCDLTIAADNAVFG 195 (327)
T ss_pred cCCCCceecCcChhhhhccc-ccchhHHHHH--HHHHHHHHHHhCCCCEEEEECCEEecHHHHHHHhCCEEEEeCCCEEe
Confidence 33337999999998764211 0111111111 12346778999999999999999999999999999999999999999
Q ss_pred CCCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHHH
Q 019602 99 MPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIV 178 (338)
Q Consensus 99 ~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~ 178 (338)
+||+++|++|++|++++|++++|.+ ++++|+++|+.++ |+||+++|||++|+|.+++.+.+
T Consensus 196 ~pe~~~Gl~p~~gg~~~L~rliG~~-~A~ellltG~~~~-A~eA~~~GLV~~vv~~~~l~~~a----------------- 256 (327)
T PLN02921 196 QTGPKVGSFDAGYGSSIMARLVGQK-KAREMWFLARFYT-ASEALKMGLVNTVVPLDELEGET----------------- 256 (327)
T ss_pred CcccccCCCCCccHHHHHHHHhCHH-HHHHHHHcCCcCC-HHHHHHCCCceEEeCHHHHHHHH-----------------
Confidence 9999999999999999999999998 9999999999999 99999999999999988877755
Q ss_pred HHHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHHH
Q 019602 179 ALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKV 258 (338)
Q Consensus 179 ~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~~ 258 (338)
.+||+ +|+.+||.+++.+|++++..
T Consensus 257 ---------------------------------------------------~~~a~----~la~~~p~al~~~K~~l~~~ 281 (327)
T PLN02921 257 ---------------------------------------------------VKWCR----EILRNSPTAIRVLKSALNAA 281 (327)
T ss_pred ---------------------------------------------------HHHHH----HHHccCHHHHHHHHHHHHHh
Confidence 35777 99999999999999999876
Q ss_pred hhhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCCCCCCCCCC
Q 019602 259 ASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNP 311 (338)
Q Consensus 259 ~~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK~r~p~w~~ 311 (338)
. .. .......+...+..++.++|++||+++|+ +| |+|.|.+
T Consensus 282 ~---------~~-~~~~~~~~~~~~~~~~~s~d~~egi~Af~-ek-r~p~f~~ 322 (327)
T PLN02921 282 D---------DG-HAGLQELGGNATLLFYGSEEGNEGRTAYL-EG-RAPDFSK 322 (327)
T ss_pred h---------cc-hhHHHHHHHHHHHHHhcCHHHHHHHHHHh-cc-CCCCCCC
Confidence 5 22 33444444567778889999999999999 78 8999986
No 60
>PRK07827 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4.1e-38 Score=293.20 Aligned_cols=201 Identities=18% Similarity=0.248 Sum_probs=172.4
Q ss_pred CCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeCC
Q 019602 21 PNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMP 100 (338)
Q Consensus 21 ~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~p 100 (338)
.|++||+|+|++++..... ........++.....++.++..+||||||+|||+|+|||++|+++||+|||+++++|++|
T Consensus 59 ~g~~F~aG~Dl~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~p 137 (260)
T PRK07827 59 TGGTFCAGADLSEAGGGGG-DPYDAAVARAREMTALLRAIVELPKPVIAAIDGHVRAGGFGLVGACDIVVAGPESTFALT 137 (260)
T ss_pred CCCCccCCcChHHHhhccc-CchhHHHHHHHHHHHHHHHHHhCCCCEEEEEcCeeecchhhHHHhCCEEEEcCCCEEeCc
Confidence 5789999999998753111 111112234455567888999999999999999999999999999999999999999999
Q ss_pred CCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHHHHH
Q 019602 101 ENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVAL 180 (338)
Q Consensus 101 e~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~ 180 (338)
|+++|++|++|+++++++++| . ++++++++|++++ |++|+++|||+++++ ++.+.+
T Consensus 138 e~~~Gl~p~~g~~~~l~~l~~-~-~a~~l~l~g~~~~-a~eA~~~Glv~~v~~--~l~~~a------------------- 193 (260)
T PRK07827 138 EARIGVAPAIISLTLLPRLSP-R-AAARYYLTGEKFG-AAEAARIGLVTAAAD--DVDAAV------------------- 193 (260)
T ss_pred ccccCCCCCcccchhHHhhhH-H-HHHHHHHhCCccC-HHHHHHcCCcccchH--HHHHHH-------------------
Confidence 999999999999999998764 5 8999999999999 999999999999874 344433
Q ss_pred HHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHHHhh
Q 019602 181 LAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVAS 260 (338)
Q Consensus 181 l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~~~~ 260 (338)
.++|+ +|++.||.+++.+|+++++..
T Consensus 194 -------------------------------------------------~~~a~----~la~~~~~a~~~~K~~l~~~~- 219 (260)
T PRK07827 194 -------------------------------------------------AALLA----DLRRGSPQGLAESKALTTAAV- 219 (260)
T ss_pred -------------------------------------------------HHHHH----HHHhCCHHHHHHHHHHHHhhh-
Confidence 34666 999999999999999999877
Q ss_pred hcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCCCCCCCCC
Q 019602 261 AHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWN 310 (338)
Q Consensus 261 ~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK~r~p~w~ 310 (338)
..++.+.++.|...+..++.++|+++|+++|+ +| |+|+|.
T Consensus 220 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~af~-~k-r~p~~~ 259 (260)
T PRK07827 220 --------LAGFDRDAEELTEESARLFVSDEAREGMTAFL-QK-RPPRWA 259 (260)
T ss_pred --------cCCHHHHHHHHHHHHHHHhcChhHHHHHHHHh-cC-CCCCCC
Confidence 67899999999999999999999999999999 78 889995
No 61
>PRK07854 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4.5e-38 Score=290.18 Aligned_cols=192 Identities=16% Similarity=0.213 Sum_probs=168.0
Q ss_pred CCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeC
Q 019602 20 FPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAM 99 (338)
Q Consensus 20 ~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~ 99 (338)
..|++||+|+|+.+... ...+.....+++.++.++||||||+|||+|+|||++|+++||+|||+++++|++
T Consensus 51 g~g~~F~aG~Dl~~~~~---------~~~~~~~~~~~~~~l~~~~kP~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~ 121 (243)
T PRK07854 51 GQGTVFCAGADLSGDVY---------ADDFPDALIEMLHAIDAAPVPVIAAINGPAIGAGLQLAMACDLRVVAPEAYFQF 121 (243)
T ss_pred CCCCceecccCCccchh---------HHHHHHHHHHHHHHHHhCCCCEEEEecCcccccHHHHHHhCCEEEEcCCCEEec
Confidence 35789999999985210 112334445678889999999999999999999999999999999999999999
Q ss_pred CCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHHHH
Q 019602 100 PENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVA 179 (338)
Q Consensus 100 pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~ 179 (338)
||+++|++|++|++++|++++|++ ++++|++||++++ |+||+++|||++|++ +. .+
T Consensus 122 pe~~~G~~p~~g~~~~l~~~~G~~-~a~~l~ltg~~~~-a~eA~~~Glv~~v~~---~~-~a------------------ 177 (243)
T PRK07854 122 PVAKYGIALDNWTIRRLSSLVGGG-RARAMLLGAEKLT-AEQALATGMANRIGT---LA-DA------------------ 177 (243)
T ss_pred cccccccCCCccHHHHHHHHhCHH-HHHHHHHcCCCcC-HHHHHHCCCcccccC---HH-HH------------------
Confidence 999999999999999999999998 9999999999999 999999999999965 22 22
Q ss_pred HHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHHHh
Q 019602 180 LLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVA 259 (338)
Q Consensus 180 ~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~~~ 259 (338)
.+||+ +|...||.+++.+|++++..
T Consensus 178 --------------------------------------------------~~~a~----~l~~~~~~a~~~~K~~l~~~- 202 (243)
T PRK07854 178 --------------------------------------------------QAWAA----EIAGLAPLALQHAKRVLNDD- 202 (243)
T ss_pred --------------------------------------------------HHHHH----HHHhCCHHHHHHHHHHHHcc-
Confidence 35777 99999999999999999753
Q ss_pred hhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCCCCCCCCCC
Q 019602 260 SAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNP 311 (338)
Q Consensus 260 ~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK~r~p~w~~ 311 (338)
.++++.+..|...+..++.++|++||+++|+ +| |+|.|.+
T Consensus 203 ----------~~~~~~~~~e~~~~~~~~~~~d~~eg~~af~-~k-r~p~~~~ 242 (243)
T PRK07854 203 ----------GAIEEAWPAHKELFDKAWASQDAIEAQVARI-EK-RPPKFQG 242 (243)
T ss_pred ----------CCHHHHHHHHHHHHHHHhcCchHHHHHHHHh-CC-CCCCCCC
Confidence 3588999999999999999999999999999 78 8999975
No 62
>PRK06023 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.2e-38 Score=295.33 Aligned_cols=192 Identities=17% Similarity=0.202 Sum_probs=167.6
Q ss_pred CCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeC
Q 019602 20 FPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAM 99 (338)
Q Consensus 20 ~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~ 99 (338)
..|++||+|+|++++..... .. ..+.....+++.+|..+||||||+|||+|+|||++|+++||||||+++++|++
T Consensus 58 g~g~~FcaG~Dl~~~~~~~~-~~----~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~la~acD~ria~~~a~f~~ 132 (251)
T PRK06023 58 GTEGCFSAGNDMQDFLAAAM-GG----TSFGSEILDFLIALAEAEKPIVSGVDGLAIGIGTTIHLHCDLTFASPRSLFRT 132 (251)
T ss_pred CCCCCeecCcCHHHHhhccc-cc----hhhHHHHHHHHHHHHhCCCCEEEEeCCceecHHHHHHHhCCEEEEeCCCEecC
Confidence 35789999999998753211 11 11223344678889999999999999999999999999999999999999999
Q ss_pred CCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHHHH
Q 019602 100 PENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVA 179 (338)
Q Consensus 100 pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~ 179 (338)
||+++|++|++|+++++++++|++ ++++++++|+.++ |+||+++|||+++||.+++.+.+
T Consensus 133 pe~~~Gl~p~~g~~~~l~~~~g~~-~a~~l~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a------------------ 192 (251)
T PRK06023 133 PFVDLALVPEAGSSLLAPRLMGHQ-RAFALLALGEGFS-AEAAQEAGLIWKIVDEEAVEAET------------------ 192 (251)
T ss_pred cccccCCCCCchHHHHHHHHHhHH-HHHHHHHhCCCCC-HHHHHHcCCcceeeCHHHHHHHH------------------
Confidence 999999999999999999999998 9999999999999 99999999999999988877655
Q ss_pred HHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHHHh
Q 019602 180 LLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVA 259 (338)
Q Consensus 180 ~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~~~ 259 (338)
.++|+ +|...||.+++.+|++++...
T Consensus 193 --------------------------------------------------~~~a~----~l~~~~~~a~~~~K~~l~~~~ 218 (251)
T PRK06023 193 --------------------------------------------------LKAAE----ELAAKPPQALQIARDLMRGPR 218 (251)
T ss_pred --------------------------------------------------HHHHH----HHHhCCHHHHHHHHHHHHhch
Confidence 35666 999999999999999998644
Q ss_pred hhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhh
Q 019602 260 SAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVL 300 (338)
Q Consensus 260 ~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl 300 (338)
..+.+.+..|.+.+..++.++|++||+++|+
T Consensus 219 ----------~~l~~~~~~e~~~~~~~~~~~~~~e~~~af~ 249 (251)
T PRK06023 219 ----------EDILARIDEEAKHFAARLKSAEARAAFEAFM 249 (251)
T ss_pred ----------hhHHHHHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 3588899999888999999999999999999
No 63
>PLN03214 probable enoyl-CoA hydratase/isomerase; Provisional
Probab=100.00 E-value=2.6e-38 Score=297.14 Aligned_cols=195 Identities=13% Similarity=0.177 Sum_probs=169.6
Q ss_pred CeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeCCCC
Q 019602 23 NAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPEN 102 (338)
Q Consensus 23 ~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~pe~ 102 (338)
++||+|+||.++... ..+.+....+......++.+|..+||||||+|||+|+|||++|+++|||||++++++|++||+
T Consensus 68 ~~FcaG~Dl~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~lalacD~ria~~~a~f~~pe~ 145 (278)
T PLN03214 68 DVFTAGNDIAELYAP--KTSAARYAEFWLTQTTFLVRLLRSRLATVCAIRGACPAGGCAVSLCCDYRLQTTEGTMGLNEV 145 (278)
T ss_pred CcccCccCHHHHhcc--ccchHHHHHHHHHHHHHHHHHHcCCCCEEEEEcCcccchHHHHHHhCCEEEecCCCEecCcHH
Confidence 799999999987521 111111223333334577889999999999999999999999999999999999999999999
Q ss_pred CcCc-CCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHHHHHH
Q 019602 103 GIGL-FPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALL 181 (338)
Q Consensus 103 ~lGl-~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l 181 (338)
++|+ +|++|++++|++++|++ ++++|++||+.++ |+||+++||||++||.+++.+.+
T Consensus 146 ~lGl~~p~~~~~~~l~~~~G~~-~a~~llltg~~~~-a~eA~~~Glv~~vv~~~~l~~~a-------------------- 203 (278)
T PLN03214 146 ALGIPVPKFWARLFMGRVIDRK-VAESLLLRGRLVR-PAEAKQLGLIDEVVPAAALMEAA-------------------- 203 (278)
T ss_pred HhCCCCCChhHHHHHHHhcCHH-HHHHHHHcCCccC-HHHHHHcCCCcEecChHHHHHHH--------------------
Confidence 9999 59999999999999998 9999999999999 99999999999999987776654
Q ss_pred HhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHHHhhh
Q 019602 182 AKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASA 261 (338)
Q Consensus 182 ~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~~~~~ 261 (338)
.+|++ +|...||.+++.+|++++...
T Consensus 204 ------------------------------------------------~~~a~----~l~~~~~~a~~~~K~~l~~~~-- 229 (278)
T PLN03214 204 ------------------------------------------------ASAME----RALKLPSAARAATKALLREEF-- 229 (278)
T ss_pred ------------------------------------------------HHHHH----HHHcCCHHHHHHHHHHHHhhH--
Confidence 24666 899999999999999999877
Q ss_pred cCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCC
Q 019602 262 HGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDK 303 (338)
Q Consensus 262 ~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK 303 (338)
..++++.++.|.+.+..++.++|++||+++|+ +|
T Consensus 230 -------~~~l~~~~~~e~~~~~~~~~s~d~~egi~afl-ek 263 (278)
T PLN03214 230 -------SAAWEAYYEEEAKGGWKMLSEPSIIKALGGVM-ER 263 (278)
T ss_pred -------HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH-HH
Confidence 56799999999999999999999999999999 55
No 64
>PRK07112 polyketide biosynthesis enoyl-CoA hydratase; Validated
Probab=100.00 E-value=8.9e-38 Score=290.17 Aligned_cols=202 Identities=12% Similarity=0.100 Sum_probs=169.4
Q ss_pred cCCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEe
Q 019602 19 SFPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLA 98 (338)
Q Consensus 19 s~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~ 98 (338)
+..|++||+|+||.++....... ............++.++.++||||||+|||+|+|||++|+++||+|||+++++|+
T Consensus 53 ~g~g~~FsaG~Dl~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~~ia~~~a~f~ 130 (255)
T PRK07112 53 EGLPEVFCFGADFSAIAEKPDAG--RADLIDAEPLYDLWHRLATGPYVTIAHVRGKVNAGGIGFVAASDIVIADETAPFS 130 (255)
T ss_pred EcCCCCcccCcCHHHHhhccccc--hhhhhhHHHHHHHHHHHHcCCCCEEEEEecEEEcchhHHHHcCCEEEEcCCCEEe
Confidence 34578999999999875321111 1111112334567888999999999999999999999999999999999999999
Q ss_pred CCCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHHH
Q 019602 99 MPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIV 178 (338)
Q Consensus 99 ~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~ 178 (338)
+||+++|++|+++ +.+|++++|++ ++++|+++|++++ |+||+++||||+++|+++. .+
T Consensus 131 ~pe~~~Gl~p~~~-~~~l~~~vg~~-~a~~l~l~g~~~~-a~eA~~~Glv~~vv~~~~~--~~----------------- 188 (255)
T PRK07112 131 LSELLFGLIPACV-LPFLIRRIGTQ-KAHYMTLMTQPVT-AQQAFSWGLVDAYGANSDT--LL----------------- 188 (255)
T ss_pred CchhhhccCcchh-hHHHHHHhCHH-HHHHHHHhCCccc-HHHHHHcCCCceecCcHHH--HH-----------------
Confidence 9999999999876 45799999998 9999999999999 9999999999999986442 11
Q ss_pred HHHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHHH
Q 019602 179 ALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKV 258 (338)
Q Consensus 179 ~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~~ 258 (338)
.++++ ++...||.+++.+|++++..
T Consensus 189 ---------------------------------------------------~~~a~----~l~~~~p~a~~~~K~~~~~~ 213 (255)
T PRK07112 189 ---------------------------------------------------RKHLL----RLRCLNKAAVARYKSYASTL 213 (255)
T ss_pred ---------------------------------------------------HHHHH----HHHhCCHHHHHHHHHHHHHh
Confidence 24666 99999999999999999864
Q ss_pred hhhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCCCCCCCCCC
Q 019602 259 ASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNP 311 (338)
Q Consensus 259 ~~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK~r~p~w~~ 311 (338)
. ..+.+.++.|.+....++.++|++||+++|+ +| |+|.|..
T Consensus 214 ~----------~~~~~~~~~e~~~~~~~~~~~~~~eg~~af~-~k-r~p~~~~ 254 (255)
T PRK07112 214 D----------DTVAAARPAALAANIEMFADPENLRKIARYV-ET-GKFPWEA 254 (255)
T ss_pred h----------hhHHHHHHHHHHHHHHHHcChHHHHHHHHHH-cC-CCCCCCC
Confidence 3 4588999999999999999999999999999 78 8999974
No 65
>PRK08259 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=5e-38 Score=291.69 Aligned_cols=198 Identities=14% Similarity=0.076 Sum_probs=165.8
Q ss_pred cCCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEe
Q 019602 19 SFPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLA 98 (338)
Q Consensus 19 s~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~ 98 (338)
+..|++||+|+|++++... . .+ ..... ....+...+..+||||||+|||+|+|||++|+++||+|||+++++|+
T Consensus 54 tg~g~~FcaG~Dl~~~~~~-~-~~--~~~~~--~~~~~~~~~~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~ 127 (254)
T PRK08259 54 WGAGGTFCAGADLKAVGTG-R-GN--RLHPS--GDGPMGPSRMRLSKPVIAAVSGYAVAGGLELALWCDLRVAEEDAVFG 127 (254)
T ss_pred ECCCCCccCCcChHHHhcc-c-ch--hhhhh--hcchhhhHHhcCCCCEEEEECCEEEhHHHHHHHhCCEEEecCCCEec
Confidence 3467899999999987531 1 11 11110 01112223357999999999999999999999999999999999999
Q ss_pred CCCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHHH
Q 019602 99 MPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIV 178 (338)
Q Consensus 99 ~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~ 178 (338)
+||+++|++|.+|++++|++++|+. ++++|+++|++++ |+||+++||||+|||++++.+.+
T Consensus 128 ~pe~~~Gl~p~~g~~~~l~~~iG~~-~a~~lll~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a----------------- 188 (254)
T PRK08259 128 VFCRRWGVPLIDGGTVRLPRLIGHS-RAMDLILTGRPVD-ADEALAIGLANRVVPKGQARAAA----------------- 188 (254)
T ss_pred CcccccCCCCCccHHHHHHHHhCHH-HHHHHHHcCCccC-HHHHHHcCCCCEeeChhHHHHHH-----------------
Confidence 9999999999999999999999998 9999999999999 99999999999999998887755
Q ss_pred HHHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHHH
Q 019602 179 ALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKV 258 (338)
Q Consensus 179 ~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~~ 258 (338)
.+||+ +|++.||.+++.+|++++..
T Consensus 189 ---------------------------------------------------~~~a~----~la~~~~~a~~~~K~~~~~~ 213 (254)
T PRK08259 189 ---------------------------------------------------EELAA----ELAAFPQTCLRADRLSALEQ 213 (254)
T ss_pred ---------------------------------------------------HHHHH----HHHhCCHHHHHHHHHHHHHh
Confidence 35677 99999999999999999987
Q ss_pred hhhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCCCCCC
Q 019602 259 ASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNP 307 (338)
Q Consensus 259 ~~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK~r~p 307 (338)
. ..++++.+..|...+...+. +|++||+++|+ +|.++|
T Consensus 214 ~---------~~~~~~~~~~e~~~~~~~~~-~d~~egi~af~-~~~~~~ 251 (254)
T PRK08259 214 W---------GLPEEAALANEFAHGLAVLA-AEALEGAARFA-AGAGRH 251 (254)
T ss_pred h---------cCCHHHHHHHHHHHHHHHHh-hHHHHHHHHHH-hhhccc
Confidence 6 67899999999887777776 99999999999 453554
No 66
>PRK08321 naphthoate synthase; Validated
Probab=100.00 E-value=2.7e-37 Score=293.49 Aligned_cols=204 Identities=17% Similarity=0.172 Sum_probs=167.6
Q ss_pred CeEEcCCChhHHhhhh---ccCCh-H--HHHHHHH-HHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEe-CC
Q 019602 23 NAVICGQSPLNHLQST---TQNQL-S--EMIEVFT-AEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVT-EK 94 (338)
Q Consensus 23 ~~F~aG~Dl~~~~~~~---~~~~~-~--~~~~~~~-~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias-~~ 94 (338)
++||+|+|+.++.... ...+. . ....... ....+...+..+||||||+|||+|+|||++|+++||+|||+ ++
T Consensus 87 ~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pkP~IAaV~G~a~GgG~~lalacD~ria~~~~ 166 (302)
T PRK08321 87 WAFCSGGDQRIRGRDGYQYAEGDEADTVDPARAGRLHILEVQRLIRFMPKVVIAVVPGWAAGGGHSLHVVCDLTLASREH 166 (302)
T ss_pred CeeecCcChhhhccccccccccccccchhhhHHHHHHHHHHHHHHHcCCCCEEEEEcCeeehHHHHHHHhCCEEEEecCC
Confidence 7999999998763210 00000 0 0011111 12245667899999999999999999999999999999999 68
Q ss_pred eEEeCCCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCch
Q 019602 95 TLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPH 174 (338)
Q Consensus 95 a~f~~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~ 174 (338)
++|++||+++|++|+++++++|++++|.+ ++++|++||+.++ |+||+++|||+++||++++.+.+.
T Consensus 167 a~f~~pe~~~Gl~p~~~~~~~L~r~vG~~-~A~~l~ltG~~~~-A~eA~~~GLv~~vv~~~~l~~~a~------------ 232 (302)
T PRK08321 167 ARFKQTDADVGSFDGGYGSAYLARQVGQK-FAREIFFLGRTYS-AEEAHDMGAVNAVVPHAELETEAL------------ 232 (302)
T ss_pred CEEECCccccccCCCchHHHHHHHHhCHH-HHHHHHHcCCccC-HHHHHHCCCceEeeCHHHHHHHHH------------
Confidence 99999999999999999999999999998 9999999999999 999999999999999888777553
Q ss_pred hHHHHHHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHH
Q 019602 175 QDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKY 254 (338)
Q Consensus 175 ~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~ 254 (338)
++|+ +|+..||.+++.+|++
T Consensus 233 --------------------------------------------------------~~a~----~la~~~~~a~~~~K~~ 252 (302)
T PRK08321 233 --------------------------------------------------------EWAR----EINGKSPTAMRMLKYA 252 (302)
T ss_pred --------------------------------------------------------HHHH----HHHhCCHHHHHHHHHH
Confidence 5666 9999999999999999
Q ss_pred HHHHhhhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCCCCCCCCCCC
Q 019602 255 FSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPA 312 (338)
Q Consensus 255 l~~~~~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK~r~p~w~~~ 312 (338)
++... . .+.+....|.+.+..++.++|++||+++|+ +| |+|.|+..
T Consensus 253 l~~~~---------~-~~~~~~~~e~~~~~~~~~~~d~~egi~af~-ek-r~p~~~~~ 298 (302)
T PRK08321 253 FNLTD---------D-GLVGQQLFAGEATRLAYMTDEAQEGRDAFL-EK-RDPDWSDF 298 (302)
T ss_pred HHhhh---------c-ccHHHHHHHHHHHHHHhcCHHHHHHHHHHh-cc-CCCCCCCC
Confidence 98765 3 234445567788888999999999999999 78 89999763
No 67
>PRK12478 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=9.9e-38 Score=295.87 Aligned_cols=208 Identities=15% Similarity=0.083 Sum_probs=167.9
Q ss_pred cCCCCeEEcCCChhHHhhh----h-ccCChHHHHHH---HHH---HHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCC
Q 019602 19 SFPNNAVICGQSPLNHLQS----T-TQNQLSEMIEV---FTA---EYSLICKISEYKKPYISLMDGVTMGFGIGISGHGR 87 (338)
Q Consensus 19 s~~~~~F~aG~Dl~~~~~~----~-~~~~~~~~~~~---~~~---~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD 87 (338)
+..|++||+|+||++.... . ..........+ ... ....+.++..+||||||+|||+|+|||++|+++||
T Consensus 56 tG~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~LalacD 135 (298)
T PRK12478 56 RGAGRAFSGGYDFGGGFQHWGEAMMTDGRWDPGKDFAMVTARETGPTQKFMAIWRASKPVIAQVHGWCVGGASDYALCAD 135 (298)
T ss_pred ECCCCCcccCcCccccccccchhcccccccCchhhhhhhhhhhcchHHHHHHHHhCCCCEEEEEccEEehhHHHHHHHCC
Confidence 3467899999999862110 0 00000001111 011 12355678999999999999999999999999999
Q ss_pred eEEEeCCeEEeCCCCCc-CcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHh
Q 019602 88 YRIVTEKTLLAMPENGI-GLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLA 166 (338)
Q Consensus 88 ~rias~~a~f~~pe~~l-Gl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~ 166 (338)
+|||+++++|++||+++ |++| ++++ + +.+|.+ ++++|++||++++ |+||+++||||+|||++++.+.+
T Consensus 136 ~ria~~~A~f~~pe~~l~G~~~--~~~~-~-~~vG~~-~A~~llltg~~i~-A~eA~~~GLV~~vv~~~~l~~~a----- 204 (298)
T PRK12478 136 IVIASDDAVIGTPYSRMWGAYL--TGMW-L-YRLSLA-KVKWHSLTGRPLT-GVQAAEAELINEAVPFERLEARV----- 204 (298)
T ss_pred EEEEcCCcEEeccccccccCCc--hhHH-H-HHhhHH-HHHHHHHcCCccC-HHHHHHcCCcceecCHHHHHHHH-----
Confidence 99999999999999997 8885 3333 2 458998 9999999999999 99999999999999998888765
Q ss_pred cccCCCchhHHHHHHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCch
Q 019602 167 VTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPF 246 (338)
Q Consensus 167 ~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~ 246 (338)
.+||+ +|+..||.
T Consensus 205 ---------------------------------------------------------------~~~a~----~la~~~p~ 217 (298)
T PRK12478 205 ---------------------------------------------------------------AEVAT----ELARIPLS 217 (298)
T ss_pred ---------------------------------------------------------------HHHHH----HHHhCCHH
Confidence 35777 89999999
Q ss_pred HHHHHHHHHHHHhhhcCCCcccc-CCHHHHHHHHHHHHhhhCCCCCHH--------HHHHhhhcCCCCCCCCCCCCcC
Q 019602 247 SLCLTQKYFSKVASAHGKTDNEL-SKLSGVMKYEYRVALRSSLRSDFA--------EGVRAVLVDKDQNPKWNPASLE 315 (338)
Q Consensus 247 al~~~k~~l~~~~~~~~~~~~~~-~~l~~~l~~e~~~~~~~~~~~d~~--------eg~~afl~eK~r~p~w~~~~~~ 315 (338)
+++.+|++++... . .++++.+..|...+..++.++|++ ||+++|+ +| |+|+|+..+..
T Consensus 218 a~~~~K~~l~~~~---------~~~~l~~~~~~e~~~~~~~~~s~d~~e~~~~~~~egv~Af~-ek-R~p~f~~~~~~ 284 (298)
T PRK12478 218 QLQAQKLIVNQAY---------ENMGLASTQTLGGILDGLMRNTPDALEFIRTAETQGVRAAV-ER-RDGPFGDYSQA 284 (298)
T ss_pred HHHHHHHHHHHHH---------HhcchhHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHH-Hh-cCCcccccCcC
Confidence 9999999999876 3 469999999999999999999997 5999999 79 89999986544
No 68
>PRK08184 benzoyl-CoA-dihydrodiol lyase; Provisional
Probab=100.00 E-value=1.1e-36 Score=308.34 Aligned_cols=205 Identities=9% Similarity=-0.020 Sum_probs=177.2
Q ss_pred CC-CeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEec-Cccchhh-hHhhhcCCeEEEe-----
Q 019602 21 PN-NAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMD-GVTMGFG-IGISGHGRYRIVT----- 92 (338)
Q Consensus 21 ~~-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavn-G~a~GgG-~~Lal~cD~rias----- 92 (338)
.| ++||+|+|+..+. . . +.............++.+|..+||||||+|| |+|+||| ++|+++||+|||+
T Consensus 329 ~G~~~F~aG~Dl~~~~-~--~-~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~~G~a~GgG~~eLalacD~~ia~~~~~~ 404 (550)
T PRK08184 329 EGDAAAVLAADATLLA-H--K-DHWLVRETRGYLRRTLKRLDVTSRSLFALIEPGSCFAGTLAELALAADRSYMLALPDD 404 (550)
T ss_pred CCCCcEEeCCChhhhc-c--c-chHHHHHHHHHHHHHHHHHHhCCCCEEEEECCCceehhHHHHHHHHCChhhhcCCCCC
Confidence 55 5999999987321 1 1 1111122233344577899999999999997 9999999 9999999999999
Q ss_pred --CCeEEeCCCCCcCcCCCchHHHHHhcC-CCChHHHHHH--hhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhc
Q 019602 93 --EKTLLAMPENGIGLFPDVGFSYIAAKG-PGGGSVGAYL--GMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAV 167 (338)
Q Consensus 93 --~~a~f~~pe~~lGl~P~~g~~~~l~rl-~G~~~~a~~l--lltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~ 167 (338)
++++|++||+++|++|++|++++|+++ +|.+ +++++ ++||++++ |+||+++||||++||++++.+.+
T Consensus 405 ~~~~a~f~~pe~~~Gl~p~~gg~~~L~r~~vG~~-~A~~~~l~~tg~~i~-A~eA~~~GLv~~vv~~~~l~~~a------ 476 (550)
T PRK08184 405 NDPAPAITLSALNFGLYPMVNGLSRLARRFYGEP-DPLAAVRAKIGQPLD-ADAAEELGLVTAAPDDIDWEDEV------ 476 (550)
T ss_pred CCCCCEEECccccccCCCCCCcHHHhHHHhcChH-HHHHHHHHHhCCcCC-HHHHHHcCCcccccChHHHHHHH------
Confidence 999999999999999999999999988 7998 99997 58999999 99999999999999998887765
Q ss_pred ccCCCchhHHHHHHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchH
Q 019602 168 TFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFS 247 (338)
Q Consensus 168 ~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~a 247 (338)
.++|+ +++..||.+
T Consensus 477 --------------------------------------------------------------~~~a~----~ia~~~p~a 490 (550)
T PRK08184 477 --------------------------------------------------------------RIALE----ERASLSPDA 490 (550)
T ss_pred --------------------------------------------------------------HHHHH----HHHhCCHHH
Confidence 35677 999999999
Q ss_pred HHHHHHHHHHHhhhcCCCccccCCHHHH-HHHHHHHHhhhCCCCCHHH---HHHhhhcCCCCCCCCCCCCc
Q 019602 248 LCLTQKYFSKVASAHGKTDNELSKLSGV-MKYEYRVALRSSLRSDFAE---GVRAVLVDKDQNPKWNPASL 314 (338)
Q Consensus 248 l~~~k~~l~~~~~~~~~~~~~~~~l~~~-l~~e~~~~~~~~~~~d~~e---g~~afl~eK~r~p~w~~~~~ 314 (338)
++.+|++++... ..++++. +.+|.+.+..+++++|.+| |+++|+ +| |+|+|++.++
T Consensus 491 ~~~~K~~l~~~~---------~~~~~~~~~~~e~~~~~~~~~~~d~~e~~~g~~af~-ek-r~~~f~~~~~ 550 (550)
T PRK08184 491 LTGMEANLRFAG---------PETMETRIFGRLTAWQNWIFQRPNAVGEKGALKVYG-TG-QKAQFDWNRV 550 (550)
T ss_pred HHHHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHhcCCcccccchHHHHhc-cC-CCCCCCCCCC
Confidence 999999999887 7889999 9999999999999999999 999999 79 9999998653
No 69
>KOG1679 consensus Enoyl-CoA hydratase [Lipid transport and metabolism]
Probab=100.00 E-value=1.4e-37 Score=272.02 Aligned_cols=211 Identities=16% Similarity=0.190 Sum_probs=190.4
Q ss_pred cccCCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeE
Q 019602 17 ISSFPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTL 96 (338)
Q Consensus 17 ~~s~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~ 96 (338)
++|.-.++||+|.||++-. ..+.++...|.+..+.++..|..+|.||||+|+|.++|||++|+++||+|||+++++
T Consensus 81 lrS~vpgvFCaGADLKER~----~Ms~~Ev~~fV~~lR~~~~dIe~Lp~P~IAAidG~ALGGGLElALACDiRva~s~ak 156 (291)
T KOG1679|consen 81 LRSLVPGVFCAGADLKERK----TMSPSEVTRFVNGLRGLFNDIERLPQPVIAAIDGAALGGGLELALACDIRVAASSAK 156 (291)
T ss_pred EecCCCceeecCcchHhhh----cCCHHHHHHHHHHHHHHHHHHHhCCccceehhcchhcccchhhhhhccceehhhhcc
Confidence 4576778999999999865 456677888889899999999999999999999999999999999999999999999
Q ss_pred EeCCCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhH
Q 019602 97 LAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQD 176 (338)
Q Consensus 97 f~~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~ 176 (338)
|+++|++++++|+.|++.+|+|++|.. .+++|++||+.++ +.||...||||++|...+-.+.+.+-+
T Consensus 157 mGLvET~laiiPGaGGtQRLpR~vg~a-laKELIftarvl~-g~eA~~lGlVnhvv~qneegdaa~~ka----------- 223 (291)
T KOG1679|consen 157 MGLVETKLAIIPGAGGTQRLPRIVGVA-LAKELIFTARVLN-GAEAAKLGLVNHVVEQNEEGDAAYQKA----------- 223 (291)
T ss_pred ccccccceeeecCCCccchhHHHHhHH-HHHhHhhhheecc-chhHHhcchHHHHHhcCccccHHHHHH-----------
Confidence 999999999999999999999999998 9999999999999 999999999999998766444443211
Q ss_pred HHHHHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHH
Q 019602 177 IVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFS 256 (338)
Q Consensus 177 ~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~ 256 (338)
.++|+ +|.-+.|.+++++|..++
T Consensus 224 -----------------------------------------------------l~lA~----eilp~gPiavr~aKlAIn 246 (291)
T KOG1679|consen 224 -----------------------------------------------------LELAR----EILPQGPIAVRLAKLAIN 246 (291)
T ss_pred -----------------------------------------------------HHHHH----HhccCCchhhhHHHHHhc
Confidence 35677 999999999999999999
Q ss_pred HHhhhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCCCCCCCCCCC
Q 019602 257 KVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPA 312 (338)
Q Consensus 257 ~~~~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK~r~p~w~~~ 312 (338)
.+. .-++...+..|..-..+.+-+.|-.||+.+|. +| |.|.|+++
T Consensus 247 ~G~---------evdiasgl~iEe~CYaq~i~t~drLeglaaf~-ek-r~p~y~G~ 291 (291)
T KOG1679|consen 247 LGM---------EVDIASGLSIEEMCYAQIIPTKDRLEGLAAFK-EK-RKPEYKGE 291 (291)
T ss_pred cCc---------eecccccccHHHHHHHhcCcHHHHHHHHHHHH-hh-cCCCcCCC
Confidence 988 77899999999999999999999999999999 78 89998863
No 70
>PRK07110 polyketide biosynthesis enoyl-CoA hydratase; Validated
Probab=100.00 E-value=3.3e-36 Score=278.69 Aligned_cols=191 Identities=14% Similarity=0.148 Sum_probs=168.7
Q ss_pred CCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeC
Q 019602 20 FPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAM 99 (338)
Q Consensus 20 ~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~ 99 (338)
..|++||+|+|+.++... ...+ ..+ .. ..++..+.++||||||+|||+|+|||++|+++||+||++++++|++
T Consensus 57 g~g~~F~aG~Dl~~~~~~-~~~~----~~~-~~-~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~ 129 (249)
T PRK07110 57 GYPNYFATGGTQEGLLSL-QTGK----GTF-TE-ANLYSLALNCPIPVIAAMQGHAIGGGLVLGLYADIVVLSRESVYTA 129 (249)
T ss_pred CCCCCeeCCcChHHHhhc-cchh----hhH-hh-HHHHHHHHcCCCCEEEEecCceechHHHHHHhCCEEEEeCCCEecC
Confidence 357899999999987531 1111 112 22 4678889999999999999999999999999999999999999999
Q ss_pred CCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHHHH
Q 019602 100 PENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVA 179 (338)
Q Consensus 100 pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~ 179 (338)
||+++|++|++|+++++++++|+. +++++++||++++ ++||+++|||++|+|++++.+.+
T Consensus 130 pe~~~Gl~p~~g~~~~l~~~~g~~-~a~~llltg~~~~-a~eA~~~Glv~~vv~~~~l~~~a------------------ 189 (249)
T PRK07110 130 NFMKYGFTPGMGATAILPEKLGLA-LGQEMLLTARYYR-GAELKKRGVPFPVLPRAEVLEKA------------------ 189 (249)
T ss_pred chhccCCCCCchHHHHHHHHhCHH-HHHHHHHcCCccC-HHHHHHcCCCeEEeChHHHHHHH------------------
Confidence 999999999999999999999998 9999999999999 99999999999999988776654
Q ss_pred HHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHHHh
Q 019602 180 LLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVA 259 (338)
Q Consensus 180 ~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~~~ 259 (338)
.++|+ ++++.||.+++.+|+.++...
T Consensus 190 --------------------------------------------------~~~a~----~la~~~~~a~~~~K~~l~~~~ 215 (249)
T PRK07110 190 --------------------------------------------------LELAR----SLAEKPRHSLVLLKDHLVADR 215 (249)
T ss_pred --------------------------------------------------HHHHH----HHHhCCHHHHHHHHHHHHHhh
Confidence 24666 999999999999999999887
Q ss_pred hhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhh
Q 019602 260 SAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVL 300 (338)
Q Consensus 260 ~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl 300 (338)
..++.+.++.|...+...+.++|++||+++..
T Consensus 216 ---------~~~l~~~~~~e~~~~~~~~~~~~~~egi~~~~ 247 (249)
T PRK07110 216 ---------RRRLPEVIEQEVAMHEKTFHQPEVKRRIESLY 247 (249)
T ss_pred ---------hccHHHHHHHHHHHHHHHhCCHhHHHHHHHhc
Confidence 67899999999999999999999999998864
No 71
>TIGR03222 benzo_boxC benzoyl-CoA-dihydrodiol lyase. In the presence of O2, the benzoyl-CoA oxygenase/reductase BoxBA BoxAB converts benzoyl-CoA to 2,3-dihydro-2,3-dihydroxybenzoyl-CoA. Members of this family, BoxC, homologous to enoyl-CoA hydratases/isomerases, hydrolyze this compound to 3,4-dehydroadipyl-CoA semialdehyde + HCOOH.
Probab=100.00 E-value=3.4e-36 Score=303.88 Aligned_cols=204 Identities=10% Similarity=0.017 Sum_probs=176.2
Q ss_pred CCCe-EEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEe-cCccchhh-hHhhhcCCeEEE------
Q 019602 21 PNNA-VICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLM-DGVTMGFG-IGISGHGRYRIV------ 91 (338)
Q Consensus 21 ~~~~-F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaav-nG~a~GgG-~~Lal~cD~ria------ 91 (338)
.|++ ||+|+|+..+. .... ...........+++.+|..+||||||+| ||+|+||| ++|+++||+|||
T Consensus 325 ~G~~~F~aG~Dl~~~~---~~~~-~~~~~~~~~~~~~~~~l~~~~kpviAav~~G~a~GgG~~eLalacD~~ia~~~~~~ 400 (546)
T TIGR03222 325 QGDAELVLAADALLEA---HKDH-WFVRETIGYLRRTLARLDVSSRSLFALIEPGSCFAGTLAELAFAADRSYMLAFPDN 400 (546)
T ss_pred CCCCceecCcCccccc---cccc-hhHHHHHHHHHHHHHHHHcCCCCEEEEECCCeEeHHHHHHHHHhCceeeecCCCCC
Confidence 5666 99999997321 1111 1112222333457889999999999999 89999999 999999999999
Q ss_pred -eCCeEEeCCCCCcCcCCCchHHHHHhcCC-CChHHH--HHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhc
Q 019602 92 -TEKTLLAMPENGIGLFPDVGFSYIAAKGP-GGGSVG--AYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAV 167 (338)
Q Consensus 92 -s~~a~f~~pe~~lGl~P~~g~~~~l~rl~-G~~~~a--~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~ 167 (338)
+++++|++||+++|++|++|++++|++++ |.+ ++ +++++||+.++ |+||+++|||++++|++++.+.+
T Consensus 401 ~~~~a~f~~~e~~lGl~p~~gg~~~L~~~v~G~~-~a~~~~~~ltg~~i~-A~eA~~~Glv~~vv~~~~l~~~a------ 472 (546)
T TIGR03222 401 NDPEPAITLSELNFGLYPMVNGLSRLATRFYAEP-APVAAVRDKIGQALD-AEEAERLGLVTAAPDDIDWEDEI------ 472 (546)
T ss_pred CCCCCEEeCCccccccCCCcCcHHHHHHHhcCch-hHHHHHHHHhCCCCC-HHHHHHcCCcccccCchHHHHHH------
Confidence 89999999999999999999999999998 987 88 55999999999 99999999999999998887755
Q ss_pred ccCCCchhHHHHHHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchH
Q 019602 168 TFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFS 247 (338)
Q Consensus 168 ~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~a 247 (338)
.+||+ +|+.+||.+
T Consensus 473 --------------------------------------------------------------~~~a~----~la~~~p~a 486 (546)
T TIGR03222 473 --------------------------------------------------------------RIALE----ERASFSPDA 486 (546)
T ss_pred --------------------------------------------------------------HHHHH----HHHhcCHHH
Confidence 35777 999999999
Q ss_pred HHHHHHHHHHHhhhcCCCccccCCHHHH-HHHHHHHHhhhCCCCCHHH---HHHhhhcCCCCCCCCCCCC
Q 019602 248 LCLTQKYFSKVASAHGKTDNELSKLSGV-MKYEYRVALRSSLRSDFAE---GVRAVLVDKDQNPKWNPAS 313 (338)
Q Consensus 248 l~~~k~~l~~~~~~~~~~~~~~~~l~~~-l~~e~~~~~~~~~~~d~~e---g~~afl~eK~r~p~w~~~~ 313 (338)
++.+|++++... ..++++. +..|...+..++.++|.+| |+++|+ +| |+|+|+-.+
T Consensus 487 ~~~~K~~l~~~~---------~~~~~~~~~~~e~~~~~~~~~~~d~~e~~~g~~af~-ek-r~p~f~~~~ 545 (546)
T TIGR03222 487 LTGLEANLRFAG---------PETMETRIFGRLTAWQNWIFNRPNAVGENGALKVYG-SG-KKAQFDMER 545 (546)
T ss_pred HHHHHHHHhhcC---------CcChhhhHHHHHHHHHHHHhcCCcccchhhHHHHHc-cC-CCCCCCccC
Confidence 999999999887 7889999 9999999999999999999 999999 79 899998654
No 72
>PRK06190 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=8.1e-36 Score=277.39 Aligned_cols=191 Identities=19% Similarity=0.209 Sum_probs=163.9
Q ss_pred CCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeCC
Q 019602 21 PNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMP 100 (338)
Q Consensus 21 ~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~p 100 (338)
.|++||+|+|++++... .. +.. . ......++.+|..+||||||+|||+|+|||++|+++||+|||+++++|++|
T Consensus 57 ~g~~FcaG~Dl~~~~~~---~~-~~~-~-~~~~~~~~~~i~~~~kPvIAaV~G~a~GgG~~lalacD~~ia~~~a~f~~p 130 (258)
T PRK06190 57 ADPAFCAGLDLKELGGD---GS-AYG-A-QDALPNPSPAWPAMRKPVIGAINGAAVTGGLELALACDILIASERARFADT 130 (258)
T ss_pred CCCCccCCcCHHHHhcc---cc-hhh-H-HHHHHHHHHHHHhCCCCEEEEECCEeecHHHHHHHhCCEEEEeCCCEEECc
Confidence 57899999999987531 11 111 1 123456788899999999999999999999999999999999999999999
Q ss_pred CCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHHHHH
Q 019602 101 ENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVAL 180 (338)
Q Consensus 101 e~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~ 180 (338)
|+++|++|++|++++|++++|++ ++++|++||++++ |+||+++||||+++|++++.+.+
T Consensus 131 e~~~Gl~p~~g~~~~l~r~vG~~-~a~~l~ltg~~~~-a~eA~~~GLv~~vv~~~~l~~~a------------------- 189 (258)
T PRK06190 131 HARVGILPGWGLSVRLPQKVGIG-RARRMSLTGDFLD-AADALRAGLVTEVVPHDELLPRA------------------- 189 (258)
T ss_pred ccccCcCCCccHHHHHHHHhCHH-HHHHHHHhCCccC-HHHHHHcCCCeEecCHhHHHHHH-------------------
Confidence 99999999999999999999998 9999999999999 99999999999999988877655
Q ss_pred HHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHHHhh
Q 019602 181 LAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVAS 260 (338)
Q Consensus 181 l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~~~~ 260 (338)
.+||+ +|+.+||.+++.+|++++...
T Consensus 190 -------------------------------------------------~~~a~----~la~~~~~a~~~~K~~l~~~~- 215 (258)
T PRK06190 190 -------------------------------------------------RRLAA----SIAGNNPAAVRALKASYDDGA- 215 (258)
T ss_pred -------------------------------------------------HHHHH----HHHcCCHHHHHHHHHHHHHhh-
Confidence 35777 899999999999999999877
Q ss_pred hcCCCccccCCHHHHHHHHHHHHhhhCCC---CCHHHHHHhhh
Q 019602 261 AHGKTDNELSKLSGVMKYEYRVALRSSLR---SDFAEGVRAVL 300 (338)
Q Consensus 261 ~~~~~~~~~~~l~~~l~~e~~~~~~~~~~---~d~~eg~~afl 300 (338)
..++.+.++.|...+..++.+ ....+-..+|+
T Consensus 216 --------~~~l~~~~~~e~~~~~~~~~s~~~~~~~~~~~~~~ 250 (258)
T PRK06190 216 --------AAQTGDALALEAEAARAHNRSVSPDGIAARREAVM 250 (258)
T ss_pred --------cCCHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 678999999999999888887 34444445555
No 73
>PRK08788 enoyl-CoA hydratase; Validated
Probab=100.00 E-value=6.6e-34 Score=267.80 Aligned_cols=199 Identities=14% Similarity=0.050 Sum_probs=158.2
Q ss_pred ccCCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHh---hCCCcEEEEecCccchhhhHhhhcCCeEEEeCC
Q 019602 18 SSFPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKIS---EYKKPYISLMDGVTMGFGIGISGHGRYRIVTEK 94 (338)
Q Consensus 18 ~s~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~---~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~ 94 (338)
++.+|++||+|+|+.++.......+.+....+.+.....+.++. .+||||||+|||+|+|||++|+++||+||++++
T Consensus 72 tg~~gk~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~pkPvIAaV~G~a~GgG~~LalacD~ria~~~ 151 (287)
T PRK08788 72 ASDVPGVFNLGGDLALFAELIRAGDRDALLAYARACVDGVHAFHRGFGAGAISIALVQGDALGGGFEAALSHHTIIAERG 151 (287)
T ss_pred EcCCCCceEeCcCHHHHhhhccccchHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEECCeeehHHHHHHHhCCEEEecCC
Confidence 34447899999999987532111221222222233333344443 799999999999999999999999999999999
Q ss_pred eEEeCCCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCch
Q 019602 95 TLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPH 174 (338)
Q Consensus 95 a~f~~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~ 174 (338)
++|++||+++|++|++|+++++++++|++ ++++|++||+.++ |+||+++||||+++|++++.+.+
T Consensus 152 a~f~~pev~lGl~p~~g~~~~l~~~vG~~-~A~ellltG~~l~-A~eA~~~GLV~~vv~~~el~~~a------------- 216 (287)
T PRK08788 152 AKMGFPEILFNLFPGMGAYSFLARRVGPK-LAEELILSGKLYT-AEELHDMGLVDVLVEDGQGEAAV------------- 216 (287)
T ss_pred CEeeCchhhhCcCCCchHHHHHHHHhhHH-HHHHHHHcCCCCC-HHHHHHCCCCcEecCchHHHHHH-------------
Confidence 99999999999999999999999999998 9999999999999 99999999999999988877654
Q ss_pred hHHHHHHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHH
Q 019602 175 QDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKY 254 (338)
Q Consensus 175 ~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~ 254 (338)
.+|++ +|+.. |.+...+|+.
T Consensus 217 -------------------------------------------------------~~~a~----~ia~~-~~~~~a~k~~ 236 (287)
T PRK08788 217 -------------------------------------------------------RTFIR----KSKRK-LNGWRAMLRA 236 (287)
T ss_pred -------------------------------------------------------HHHHH----HHhcC-ccHHHHHHHH
Confidence 35666 88877 8888888888
Q ss_pred HHHHhhhcCCCccccCCHHHHHHHHHHHHhhhCCC-CCHHHHHHhhh
Q 019602 255 FSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLR-SDFAEGVRAVL 300 (338)
Q Consensus 255 l~~~~~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~-~d~~eg~~afl 300 (338)
++... ..++++.++.|...+..+++. +.-.+.+..|.
T Consensus 237 ~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (287)
T PRK08788 237 RRRVN---------PLSLEELMDITEIWVDAALQLEEKDLRTMERLV 274 (287)
T ss_pred HHhhc---------cCCHHHHHHHHHHHHHHHhhcccccHHHHHHHH
Confidence 87766 567999999998777765554 44466777776
No 74
>PRK05869 enoyl-CoA hydratase; Validated
Probab=100.00 E-value=9.6e-35 Score=264.54 Aligned_cols=162 Identities=17% Similarity=0.217 Sum_probs=141.0
Q ss_pred CCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeC
Q 019602 20 FPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAM 99 (338)
Q Consensus 20 ~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~ 99 (338)
..|++||+|+|++++... .. .......+...+++.++.++||||||+|||+|+|||++|+++||+|||+++++|++
T Consensus 59 g~g~~FcaG~Dl~~~~~~-~~---~~~~~~~~~~~~~~~~i~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~ 134 (222)
T PRK05869 59 GGHEIFSAGDDMPELRTL-SA---QEADTAARVRQQAVDAVAAIPKPTVAAITGYALGAGLTLALAADWRVSGDNVKFGA 134 (222)
T ss_pred CCCCCcCcCcCHHHHhcc-Ch---hhHHHHHHHHHHHHHHHHhCCCCEEEEEcCEeecHHHHHHHhCCEEEecCCCEEcC
Confidence 357899999999987532 11 11222333445688899999999999999999999999999999999999999999
Q ss_pred CCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHHHH
Q 019602 100 PENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVA 179 (338)
Q Consensus 100 pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~ 179 (338)
||+++|++|++|++.++++++|.. ++++++++|++++ |+||+++||||+++|++++.+.+
T Consensus 135 pe~~~Gl~p~~g~~~~l~~~ig~~-~a~~l~ltg~~~~-a~eA~~~Glv~~vv~~~~l~~~a------------------ 194 (222)
T PRK05869 135 TEILAGLAPSGDGMARLTRAAGPS-RAKELVFSGRFFD-AEEALALGLIDEMVAPDDVYDAA------------------ 194 (222)
T ss_pred chhccCCCCCccHHHHHHHHhCHH-HHHHHHHcCCCcC-HHHHHHCCCCCEeeCchHHHHHH------------------
Confidence 999999999999999999999998 9999999999999 99999999999999988877654
Q ss_pred HHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHHHh
Q 019602 180 LLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVA 259 (338)
Q Consensus 180 ~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~~~ 259 (338)
.+||+ +|+..||.+++.+|+.++...
T Consensus 195 --------------------------------------------------~~~a~----~ia~~~~~a~~~~K~~~~~~~ 220 (222)
T PRK05869 195 --------------------------------------------------AAWAR----RFLDGPPHALAAAKAGISDVY 220 (222)
T ss_pred --------------------------------------------------HHHHH----HHHcCCHHHHHHHHHHHHHHh
Confidence 35677 999999999999999998765
No 75
>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=100.00 E-value=1.8e-34 Score=302.01 Aligned_cols=236 Identities=19% Similarity=0.204 Sum_probs=176.8
Q ss_pred CCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeCC
Q 019602 21 PNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMP 100 (338)
Q Consensus 21 ~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~p 100 (338)
.|++||+|+|++++..... .+......+.+...+++.+|..+||||||+|||+|+|||++|+++||+|||+++++|++|
T Consensus 60 ~g~~FcaG~Dl~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~kPvIAav~G~a~GgG~~LAlacD~ria~~~a~f~~p 138 (715)
T PRK11730 60 AKDAFIVGADITEFLSLFA-APEEELSQWLHFANSIFNRLEDLPVPTVAAINGYALGGGCECVLATDYRVASPDARIGLP 138 (715)
T ss_pred CCCccccCcCHHHHhhhcc-CCHHHHHHHHHHHHHHHHHHHcCCCCEEEEECCEeehHHHHHHHhCCEEEEcCCCEEeCc
Confidence 5689999999998753211 122223345555667888999999999999999999999999999999999999999999
Q ss_pred CCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHHHHH
Q 019602 101 ENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVAL 180 (338)
Q Consensus 101 e~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~ 180 (338)
|+++|++|++|++++|++++|.. ++++|++||++++ |+||+++||||++||++++.+.+.++++.. ...|.
T Consensus 139 e~~lGl~p~~g~~~~L~rlvG~~-~A~~llltG~~~~-A~eA~~~GLv~~vv~~~~l~~~a~~~a~~l-a~~~~------ 209 (715)
T PRK11730 139 ETKLGIMPGFGGTVRLPRLIGAD-NALEWIAAGKDVR-AEDALKVGAVDAVVAPEKLQEAALALLKQA-IAGKL------ 209 (715)
T ss_pred hhhcCCCCCchHHHHHHHhcCHH-HHHHHHHcCCcCC-HHHHHHCCCCeEecCHHHHHHHHHHHHHHH-hhcCC------
Confidence 99999999999999999999998 9999999999999 999999999999999999988887776531 00000
Q ss_pred HHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHH-HHHhccCchHHHHHHHHHHHHh
Q 019602 181 LAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEAL-QGMGKGAPFSLCLTQKYFSKVA 259 (338)
Q Consensus 181 l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~-~~l~~~sp~al~~~k~~l~~~~ 259 (338)
..........+.+.. ..+.+++. ...+++.+ ++.....|..+ .++++++...
T Consensus 210 -~~~~~~~~~~~p~a~--~~~~~~~~-----------------------~~~~k~~~~~~~~~~~pa~~-~~~~~i~~~~ 262 (715)
T PRK11730 210 -DWKARRQPKLEPLKL--SKIEAMMS-----------------------FTTAKGMVAQKAGKHYPAPM-TAVKTIEAAA 262 (715)
T ss_pred -ccccccCcccccccc--cchhHHHH-----------------------HHHHHHHHHHhhccCCccHH-HHHHHHHHHh
Confidence 000000000000000 00111110 12222222 24556667776 7777888877
Q ss_pred hhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcC
Q 019602 260 SAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVD 302 (338)
Q Consensus 260 ~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~e 302 (338)
..+++++++.|.+.+..++.++|++||+++|+.+
T Consensus 263 ---------~~~~~~~l~~E~~~~~~~~~s~d~~egi~aF~~~ 296 (715)
T PRK11730 263 ---------GLGRDEALELEAKGFVKLAKTNVARALVGIFLND 296 (715)
T ss_pred ---------cCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 6789999999999999999999999999999954
No 76
>PRK06213 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=8.5e-34 Score=259.47 Aligned_cols=176 Identities=16% Similarity=0.079 Sum_probs=152.2
Q ss_pred cCCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCC-eEE
Q 019602 19 SFPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEK-TLL 97 (338)
Q Consensus 19 s~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~-a~f 97 (338)
+..|++||+|+|++++... ......++....+++.++.++||||||+|||+|+|||++|+++||+|||+++ ++|
T Consensus 51 ~g~g~~F~~G~Dl~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~kPvIAav~G~a~GgG~~lal~~D~rva~~~~a~f 125 (229)
T PRK06213 51 TGQPGIFSGGFDLKVMTSG-----AQAAIALLTAGSTLARRLLSHPKPVIVACTGHAIAKGAFLLLSADYRIGVHGPFKI 125 (229)
T ss_pred eCCCCceEcCcCHHHHhcc-----hHhHHHHHHHHHHHHHHHHcCCCCEEEEEcCeeeHHHHHHHHhCCeeeEecCCcEE
Confidence 4467899999999987521 1223345556667888999999999999999999999999999999999999 999
Q ss_pred eCCCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHH
Q 019602 98 AMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDI 177 (338)
Q Consensus 98 ~~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~ 177 (338)
++||+++|++|+++++.++++.+|+. .+++++++|++++ |+||+++||||+++|++++.+.+
T Consensus 126 ~~pe~~~Gl~~~~~~~~~l~~~~g~~-~a~~lll~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a---------------- 187 (229)
T PRK06213 126 GLNEVAIGMTMPHAAIELARDRLTPS-AFQRAVINAEMFD-PEEAVAAGFLDEVVPPEQLLARA---------------- 187 (229)
T ss_pred ECchhhhCCcCChHHHHHHHHHcCHH-HHHHHHHcCcccC-HHHHHHCCCceeccChHHHHHHH----------------
Confidence 99999999998888888899999998 9999999999999 99999999999999988777654
Q ss_pred HHHHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHH
Q 019602 178 VALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSK 257 (338)
Q Consensus 178 ~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~ 257 (338)
.+||+ ++.+.||.+++.+|++++.
T Consensus 188 ----------------------------------------------------~~~a~----~la~~~~~a~~~~K~~l~~ 211 (229)
T PRK06213 188 ----------------------------------------------------QAAAR----ELAGLNMGAHAATKLKVRA 211 (229)
T ss_pred ----------------------------------------------------HHHHH----HHhcCCHHHHHHHHHHHHH
Confidence 35677 8999999999999999998
Q ss_pred HhhhcCCCccccCCHHHHHHHHHHH
Q 019602 258 VASAHGKTDNELSKLSGVMKYEYRV 282 (338)
Q Consensus 258 ~~~~~~~~~~~~~~l~~~l~~e~~~ 282 (338)
.. ..++.+.++.|.+.
T Consensus 212 ~~---------~~~l~~~~~~~~~~ 227 (229)
T PRK06213 212 AA---------LEAIRAAIEGDAAE 227 (229)
T ss_pred HH---------HHHHHhchhhhhhh
Confidence 76 56688888877654
No 77
>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=100.00 E-value=1.8e-33 Score=294.31 Aligned_cols=234 Identities=18% Similarity=0.145 Sum_probs=176.2
Q ss_pred ccCCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCC--e
Q 019602 18 SSFPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEK--T 95 (338)
Q Consensus 18 ~s~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~--a 95 (338)
++.++++||+|+|+.++... . +.+....+......++.+|.++||||||+|||+|+|||++|+++||+|||+++ +
T Consensus 58 ~~~~~~~F~aG~Dl~~~~~~-~--~~~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~a 134 (708)
T PRK11154 58 ISGKPDNFIAGADINMLAAC-K--TAQEAEALARQGQQLFAEIEALPIPVVAAIHGACLGGGLELALACHYRVCTDDPKT 134 (708)
T ss_pred ecCCCCCcccCcChHHhhcc-C--CHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCeeechHHHHHHhCCEEEEeCCCCc
Confidence 45456899999999987521 1 11122233444556888999999999999999999999999999999999996 5
Q ss_pred EEeCCCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchh
Q 019602 96 LLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQ 175 (338)
Q Consensus 96 ~f~~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~ 175 (338)
+|++||+++|++|++|++++|++++|.. ++++|++||++++ |+||+++||||+++|++++.+.+.++++..+..++.
T Consensus 135 ~fg~pe~~lGl~p~~gg~~~L~r~vG~~-~A~~llltG~~i~-a~eA~~~GLv~~vv~~~~l~~~a~~~A~~~~~~~~~- 211 (708)
T PRK11154 135 VLGLPEVQLGLLPGSGGTQRLPRLIGVS-TALDMILTGKQLR-AKQALKLGLVDDVVPHSILLEVAVELAKKGKPARRP- 211 (708)
T ss_pred eEeCccccCCCCCCccHHhHHHhhcCHH-HHHHHHHhCCcCC-HHHHHHCCCCcEecChHHHHHHHHHHHHhcCCccCc-
Confidence 9999999999999999999999999998 9999999999999 999999999999999999998888877641100000
Q ss_pred HHHHHHHhhcCCCCCCccccccchhhhhhcCCC-CCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHH
Q 019602 176 DIVALLAKYSSDPEGEAPLKLLLPQITSCFSSE-KSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKY 254 (338)
Q Consensus 176 ~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~-~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~ 254 (338)
++ . + ....... .....+ .+.+.+...+-.+..-.+++.+|++
T Consensus 212 ------------------~~-~-~--~~~~~~~p~~~~~~---------------~~~~~~~~~~~~~g~~~A~~~~k~~ 254 (708)
T PRK11154 212 ------------------LP-V-R--ERLLEGNPLGRALL---------------FKQARKKTLAKTQGNYPAPERILDV 254 (708)
T ss_pred ------------------CC-c-h--hhhcccCchhHHHH---------------HHHHHHHHHHhcccCChHHHHHHHH
Confidence 00 0 0 0000000 000111 1122222222223234689999999
Q ss_pred HHHHhhhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCC
Q 019602 255 FSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDK 303 (338)
Q Consensus 255 l~~~~~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK 303 (338)
++... ..++++++..|.+.+..++.++|+++++++|+.++
T Consensus 255 i~~~~---------~~~~~~~l~~E~~~~~~~~~s~~~~~~~~aF~~~~ 294 (708)
T PRK11154 255 VRTGL---------EKGMSSGYEAEARAFGELAMTPESAALRSIFFATT 294 (708)
T ss_pred HHHHh---------cCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 99887 67899999999999999999999999999998654
No 78
>KOG1681 consensus Enoyl-CoA isomerase [Lipid transport and metabolism]
Probab=100.00 E-value=1.9e-34 Score=254.41 Aligned_cols=213 Identities=18% Similarity=0.229 Sum_probs=180.3
Q ss_pred ccccc----cCCCCeEEcCCChhHHhhhhc---cCC-----hHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhH
Q 019602 14 DSNIS----SFPNNAVICGQSPLNHLQSTT---QNQ-----LSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIG 81 (338)
Q Consensus 14 d~~~~----s~~~~~F~aG~Dl~~~~~~~~---~~~-----~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~ 81 (338)
|+.|+ |+.|++||+|.|+..+..... .++ ......+...++..+..|.+||||||++|||+|+|||+.
T Consensus 64 dpdcr~iilsg~GKhFcaGIDl~~~~~~~~~~~~~dd~aR~g~~lrr~Ik~~Q~~~t~ie~CpKPVIaavHg~CiGagvD 143 (292)
T KOG1681|consen 64 DPDCRAIILSGAGKHFCAGIDLNDMASDRILQPEGDDVARKGRSLRRIIKRYQDTFTAIERCPKPVIAAVHGACIGAGVD 143 (292)
T ss_pred CCCceEEEEecCCcceecccCcchhhhhhccccccchHhhhhHHHHHHHHHHHHHHHHHHhCChhHHHHHHhhhcccccc
Confidence 65554 679999999999877654311 111 122334445566688899999999999999999999999
Q ss_pred hhhcCCeEEEeCCeEEeCCCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCC-hHHH
Q 019602 82 ISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGN-LGSL 160 (338)
Q Consensus 82 Lal~cD~rias~~a~f~~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~-l~~~ 160 (338)
|..+||+|+|++++.|..-|+.+|+..+.|...+||+.+|.++.++++.+|++.|. |.||++.|||++|+|+.+ +...
T Consensus 144 LiTAcDIRycsqDAffsvkEVDvglaADvGTL~RlpkvVGn~s~~~elafTar~f~-a~EAl~~GLvSrvf~dk~~ll~~ 222 (292)
T KOG1681|consen 144 LITACDIRYCSQDAFFSVKEVDVGLAADVGTLNRLPKVVGNQSLARELAFTARKFS-ADEALDSGLVSRVFPDKEELLNG 222 (292)
T ss_pred ceeecceeeecccceeeeeeeeeehhhchhhHhhhhHHhcchHHHHHHHhhhhhcc-hhhhhhcCcchhhcCCHHHHHhh
Confidence 99999999999999999999999999999999999999996669999999999999 999999999999999644 2221
Q ss_pred HHHHHhcccCCCchhHHHHHHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHH
Q 019602 161 KEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGM 240 (338)
Q Consensus 161 ~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l 240 (338)
+...|. .|
T Consensus 223 --------------------------------------------------------------------~l~mA~----~I 230 (292)
T KOG1681|consen 223 --------------------------------------------------------------------ALPMAE----LI 230 (292)
T ss_pred --------------------------------------------------------------------hHHHHH----Hh
Confidence 135677 99
Q ss_pred hccCchHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCCCCCCC-CC
Q 019602 241 GKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPK-WN 310 (338)
Q Consensus 241 ~~~sp~al~~~k~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK~r~p~-w~ 310 (338)
+.+||.+++.||+.|+..+ ..+.++.++.-.......+.++|+.+++.+-+ +| ++|. |.
T Consensus 231 a~KSpvaVqgTK~~L~ysr---------ehsv~~sLnyvatwNms~L~s~Dl~~av~a~m-~k-~k~~tfs 290 (292)
T KOG1681|consen 231 ASKSPVAVQGTKENLLYSR---------EHSVEESLNYVATWNMSMLLSDDLVKAVMAQM-EK-LKTVTFS 290 (292)
T ss_pred ccCCceeeechHHHHHHHh---------hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHh-hc-CCCCCcc
Confidence 9999999999999999999 78999999999988888999999999999999 56 4443 54
No 79
>TIGR03200 dearomat_oah 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase. Members of this protein family are 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase, a ring-hydrolyzing enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=4.8e-33 Score=265.58 Aligned_cols=263 Identities=17% Similarity=0.141 Sum_probs=176.3
Q ss_pred ccceeeeecccc-cccc-----ccCCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCcc
Q 019602 2 VKFKITIFHICF-DSNI-----SSFPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVT 75 (338)
Q Consensus 2 ~~~~~~~~~~~~-d~~~-----~s~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a 75 (338)
++..+++|.-+. |..+ ++.++++||+|+|++++.... .........+.....+++.++..+||||||+|||+|
T Consensus 57 l~eL~~al~~~~~D~dVrvVVLTG~G~kaFCAG~DLke~~~~~-~~~~~~~~~~~~~~~~l~~~i~~~pKPVIAAVnG~A 135 (360)
T TIGR03200 57 VKAIILAFRRASSDRDVVAVVFTAVGDKAFCTGGNTKEYAEYY-AGNPQEYRQYMRLFNDMVSAILGCDKPVICRVNGMR 135 (360)
T ss_pred HHHHHHHHHHHhhCCCceEEEEEcCCCCcccCCcCHHHHhhhc-ccChhHHHHHHHHHHHHHHHHHhCCCCEEEEECCEe
Confidence 344455555443 5444 343337999999999875321 112222334445555688899999999999999999
Q ss_pred chhhhHhhhcCCeEEEeCCeEEeCCCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCC
Q 019602 76 MGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSG 155 (338)
Q Consensus 76 ~GgG~~Lal~cD~rias~~a~f~~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~ 155 (338)
+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. ++++++++|++++ |++|+++|||++++|+.
T Consensus 136 iGGGleLALaCDlrIAse~A~Fg~PE~rlGl~P~~Ggt~rLprlvG~~-rA~~llltGe~~s-A~EA~~~GLVd~VVp~~ 213 (360)
T TIGR03200 136 IGGGQEIGMAADFTIAQDLANFGQAGPKHGSAPIGGATDFLPLMIGCE-QAMVSGTLCEPWS-AHKAKRLGIIMDVVPAL 213 (360)
T ss_pred eeHHHHHHHhCCEEEEcCCCEEeCchhccCCCCCccHHHHHHHhhCHH-HHHHHHHhCCcCc-HHHHHHcCChheecCch
Confidence 999999999999999999999999999999999999999999999998 9999999999999 99999999999999998
Q ss_pred ChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHh---cccccchhHHHH
Q 019602 156 NLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKK---HQSSAETSVAQW 232 (338)
Q Consensus 156 ~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~---~~~~~~~~~~~~ 232 (338)
+++.. |..+|.--..+.++.|..-. ...+....++....+.|++ +....|..|.++
T Consensus 214 ~~~~~--------~~~~~~~~~d~~~~~~~~~~-------------~~~~~~~~~~~~~k~~~~~~~~~~~~l~~~~~~l 272 (360)
T TIGR03200 214 KVDGK--------FVANPLVVTDRYLDEFGRIV-------------HGEFKAGDELKAGKELIKQGTIDLSLLDEAVEAL 272 (360)
T ss_pred hcCcc--------hhcCcccchHHHHHHHhHHh-------------cCCCcchhHHHHHHHHHhcccchHhHHHHHHHHH
Confidence 87431 22233222222333322211 1111111122222222221 011111112345
Q ss_pred HHHHHHHHhccCchHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCC
Q 019602 233 ADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDK 303 (338)
Q Consensus 233 A~~~~~~l~~~sp~al~~~k~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK 303 (338)
+. ++....|..+.-+++-++.-. .. ...+.+...+.....-...+.++|+++|- +|
T Consensus 273 ~~----~~~~~~~~~~~~~~~~~~~~~---------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 328 (360)
T TIGR03200 273 CA----KLLNTFPECLTKSIEELRKPK---------LF-AWNQNKENSRAWLALNMMNEARTGFRAFN-EG 328 (360)
T ss_pred HH----HHHHhchHHHHHHHHHhhhHH---------HH-HHHhhhhhhHHHHHhhcccccchhhHHHh-cc
Confidence 55 788889999988888887543 22 33444444444333333488899999999 54
No 80
>TIGR02440 FadJ fatty oxidation complex, alpha subunit FadJ. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Plays a minor role in aerobic beta-oxidation of fatty acids. FadJI complex is necessary for anaerobic growth on short-chain acids with nitrate as an electron acceptor. Activities include: enoyl-CoA hydratase (EC 4.2.1.17),3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadJ (aka YfcX). This model excludes the FadB of TIGR02437 equivalog.
Probab=100.00 E-value=9.1e-33 Score=288.51 Aligned_cols=233 Identities=16% Similarity=0.136 Sum_probs=177.7
Q ss_pred ccCCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCC--e
Q 019602 18 SSFPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEK--T 95 (338)
Q Consensus 18 ~s~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~--a 95 (338)
.+..|++||+|+|++++... .+......+......++.+|.++||||||+|||+|+|||++|+++||+|||+++ +
T Consensus 53 ~~g~g~~FcaG~Dl~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaVnG~a~GgG~~LaLacD~ria~~~~~a 129 (699)
T TIGR02440 53 VSGKPDNFIAGADISMLAAC---QTAGEAKALAQQGQVLFAELEALPIPVVAAIHGACLGGGLELALACHSRVCSDDDKT 129 (699)
T ss_pred EeCCCCceeeccCchhhhcc---CChhHHHHHHHHHHHHHHHHHhCCCCEEEEECCEeecHHHHHHHhCCEEEEcCCCCc
Confidence 35577899999999987531 111223334445566888999999999999999999999999999999999986 7
Q ss_pred EEeCCCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCC-Cch
Q 019602 96 LLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSE-DPH 174 (338)
Q Consensus 96 ~f~~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~-~~~ 174 (338)
+|++||+++|++|++|++++|++++|.. ++++|++||+.++ |++|+++||||+++|++++.+.+.++++..... +|.
T Consensus 130 ~fg~pev~lGl~p~~g~~~~L~r~vG~~-~A~~llltG~~~~-a~eA~~~GLV~~vv~~~~l~~~a~~~A~~~~~~~~~~ 207 (699)
T TIGR02440 130 VLGLPEVQLGLLPGSGGTQRLPRLIGVS-TALDMILTGKQLR-AKQALKLGLVDDVVPQSILLDTAVEMALKGKPIRKPL 207 (699)
T ss_pred EEechhhcccCCCCccHHHHHHHhcCHH-HHHHHHHcCCcCC-HHHHHhCCCCcEecChhHHHHHHHHHHHhCCCCCCCc
Confidence 9999999999999999999999999998 9999999999999 999999999999999999999888877521000 000
Q ss_pred hHHHHHHHhhcCCCCCCccccccchhhhhhcCCC-CCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHH
Q 019602 175 QDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSE-KSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQK 253 (338)
Q Consensus 175 ~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~-~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~ 253 (338)
.+.. +..... .....++ +++.+..++-...--.|.+.+|+
T Consensus 208 ------------------~~~~------~~~~~~~~a~~~~~---------------~~~~k~~~~~~~~~~~a~~~~~~ 248 (699)
T TIGR02440 208 ------------------SLQE------RLLEGTPLGRALLF---------------DQAAKKTAKKTQGNYPAAERILD 248 (699)
T ss_pred ------------------cchh------hhcccCchhHHHHH---------------HHHHHHHHHhcccCChhHHHHHH
Confidence 0000 000000 0011111 11222222233444567888999
Q ss_pred HHHHHhhhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCC
Q 019602 254 YFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDK 303 (338)
Q Consensus 254 ~l~~~~~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK 303 (338)
.++.+. ..+++++++.|.+.+..++.++|+++++++|+.++
T Consensus 249 ~i~~~~---------~~~~~~~l~~E~~~~~~~~~s~~~~~~~~~f~~~~ 289 (699)
T TIGR02440 249 VVRQGL---------AQGMQKGLDAEARAFGELVMTPESAALRSIFFATT 289 (699)
T ss_pred HHHHHh---------cCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 999887 67899999999999999999999999999998654
No 81
>PRK08290 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=3e-33 Score=264.10 Aligned_cols=187 Identities=14% Similarity=0.194 Sum_probs=151.7
Q ss_pred CCCCeEEcCCChhHHhhhhc-c----------------CChH-HHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhH
Q 019602 20 FPNNAVICGQSPLNHLQSTT-Q----------------NQLS-EMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIG 81 (338)
Q Consensus 20 ~~~~~F~aG~Dl~~~~~~~~-~----------------~~~~-~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~ 81 (338)
..|++||+|+|++++..... . .... ...........++.+|.++||||||+|||+|+|||++
T Consensus 56 g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pkPvIAaVnG~a~GgG~~ 135 (288)
T PRK08290 56 GAGKHFSAGHDLGSGTPGRDRDPGPDQHPTLWWDGATKPGVEQRYAREWEVYLGMCRRWRDLPKPTIAQVQGACIAGGLM 135 (288)
T ss_pred CCCCccccCCCccccccccccccccccccccccccccccchhhHHHHHHHHHHHHHHHHHhCCCCEEEEECCEeeHHHHH
Confidence 35789999999998632111 0 0000 0111122334567789999999999999999999999
Q ss_pred hhhcCCeEEEeCCeEEeCCCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHH
Q 019602 82 ISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLK 161 (338)
Q Consensus 82 Lal~cD~rias~~a~f~~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~ 161 (338)
|+++||+|||+++++|++||+++|+ |++ +++++++++|++ ++++|++||+.++ |+||+++|||+++||++++.+.+
T Consensus 136 lalacD~ria~e~a~f~~pe~~lGl-~~~-~~~~l~~~iG~~-~A~~llltG~~i~-A~eA~~~GLV~~vv~~~~l~~~a 211 (288)
T PRK08290 136 LAWVCDLIVASDDAFFSDPVVRMGI-PGV-EYFAHPWELGPR-KAKELLFTGDRLT-ADEAHRLGMVNRVVPRDELEAET 211 (288)
T ss_pred HHHhCCEEEeeCCCEecCcccccCc-Ccc-hHHHHHHHhhHH-HHHHHHHcCCCCC-HHHHHHCCCccEeeCHHHHHHHH
Confidence 9999999999999999999999998 443 467789999998 9999999999999 99999999999999988777654
Q ss_pred HHHHhcccCCCchhHHHHHHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHh
Q 019602 162 EALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMG 241 (338)
Q Consensus 162 ~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~ 241 (338)
.+|++ +|+
T Consensus 212 --------------------------------------------------------------------~~~a~----~la 219 (288)
T PRK08290 212 --------------------------------------------------------------------LELAR----RIA 219 (288)
T ss_pred --------------------------------------------------------------------HHHHH----HHH
Confidence 35777 999
Q ss_pred ccCchHHHHHHHHHHHHhhhcCCCcccc-CCHHHHHHHHHHHHhhhC-CCCC
Q 019602 242 KGAPFSLCLTQKYFSKVASAHGKTDNEL-SKLSGVMKYEYRVALRSS-LRSD 291 (338)
Q Consensus 242 ~~sp~al~~~k~~l~~~~~~~~~~~~~~-~~l~~~l~~e~~~~~~~~-~~~d 291 (338)
..||.+++.+|++++... . .++++++..|.......+ .+++
T Consensus 220 ~~~~~a~~~~K~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (288)
T PRK08290 220 AMPPFGLRLTKRAVNQTL---------DAQGFRAALDAVFDLHQLGHAHNAE 262 (288)
T ss_pred hCCHHHHHHHHHHHHHHH---------hhccHHHHHHHHHHHHHHccccchh
Confidence 999999999999999876 3 369999999998888766 4454
No 82
>COG0447 MenB Dihydroxynaphthoic acid synthase [Coenzyme metabolism]
Probab=99.98 E-value=2e-33 Score=246.26 Aligned_cols=221 Identities=20% Similarity=0.208 Sum_probs=173.5
Q ss_pred cceeeeecccc-ccccc-------cCCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCc
Q 019602 3 KFKITIFHICF-DSNIS-------SFPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGV 74 (338)
Q Consensus 3 ~~~~~~~~~~~-d~~~~-------s~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~ 74 (338)
+-.|++|..+. |.+++ +.++++||+|+|-+--.....-.+.+.... .....+.+.|+.+||||||.|+|+
T Consensus 49 ~Em~~Af~~Ar~d~~vGvi~lTG~~~G~~AFCsGGDQ~vRg~~~gY~~d~~~~r--LnvLdlQrlIR~~PKpViA~V~G~ 126 (282)
T COG0447 49 DEMIDAFADARDDPNVGVILLTGNGDGDKAFCSGGDQKVRGDSGGYVDDDGIPR--LNVLDLQRLIRTMPKPVIAMVAGY 126 (282)
T ss_pred HHHHHHHHhhhcCCCccEEEEecCCCCCeeeecCCCceecccCCCccCCccCcc--cchhhHHHHHHhCCcceEEEEeeE
Confidence 44577788777 66663 357899999999654322111111111111 122346678999999999999999
Q ss_pred cchhhhHhhhcCCeEEEeCCeEEeCCCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCC
Q 019602 75 TMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPS 154 (338)
Q Consensus 75 a~GgG~~Lal~cD~rias~~a~f~~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~ 154 (338)
++|||-.|-+.||+.||++++.|+....++|-+-++.++-+|.|.+|.. +|+++++.++.|+ |+||+++|+||.|||-
T Consensus 127 AiGGGhvlhvvCDLTiAa~nA~FgQTgp~VGSFD~G~Gs~ylar~VGqK-kArEIwfLcR~Y~-A~eal~MGlVN~Vvp~ 204 (282)
T COG0447 127 AIGGGHVLHVVCDLTIAADNAIFGQTGPKVGSFDGGYGSSYLARIVGQK-KAREIWFLCRQYD-AEEALDMGLVNTVVPH 204 (282)
T ss_pred eccCccEEEEEeeeeeehhcchhcCCCCCcccccCcccHHHHHHHhhhh-hhHHhhhhhhhcc-HHHHHhcCceeeeccH
Confidence 9999999999999999999999999999999996655677999999998 9999999999999 9999999999999999
Q ss_pred CChHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHH
Q 019602 155 GNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWAD 234 (338)
Q Consensus 155 ~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~ 234 (338)
++|++.. .+||+
T Consensus 205 ~~LE~e~--------------------------------------------------------------------v~W~~ 216 (282)
T COG0447 205 ADLEKET--------------------------------------------------------------------VQWAR 216 (282)
T ss_pred HHHHHHH--------------------------------------------------------------------HHHHH
Confidence 9988755 47999
Q ss_pred HHHHHHhccCchHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCCCCCCCCCC
Q 019602 235 EALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNP 311 (338)
Q Consensus 235 ~~~~~l~~~sp~al~~~k~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK~r~p~w~~ 311 (338)
.|.++||.+++..|..++..- ..+...-+.......-...+++.+||..+|+ || |.|.|+.
T Consensus 217 ----E~l~kSP~AlR~LK~Afnad~----------DGlaG~q~~ag~at~L~YmTdEa~EGr~AF~-eK-R~Pdf~~ 277 (282)
T COG0447 217 ----EMLAKSPTALRMLKAAFNADC----------DGLAGLQELAGNATLLYYMTDEAQEGRDAFL-EK-RKPDFSK 277 (282)
T ss_pred ----HHHhcChHHHHHHHHHhcCCC----------chhhHHHHhcccceEEEEechhhhhhHHHHh-hc-cCCChHh
Confidence 999999999999999887543 2333333333334444566999999999999 79 9999864
No 83
>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399.
Probab=99.97 E-value=2.3e-31 Score=278.20 Aligned_cols=237 Identities=20% Similarity=0.209 Sum_probs=172.4
Q ss_pred CCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeCC
Q 019602 21 PNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMP 100 (338)
Q Consensus 21 ~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~p 100 (338)
.+++||+|+|+.++..... .+......+++....++.+|..+||||||+|||+|+|||++|+++||+|||+++++|++|
T Consensus 60 ~g~~F~aG~Dl~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~pkPvIAai~G~alGGGleLalacD~ria~~~a~fglP 138 (714)
T TIGR02437 60 GKDAFIVGADITEFLGLFA-LPDAELIQWLLFANSIFNKLEDLPVPTVAAINGIALGGGCECVLATDFRIADDTAKIGLP 138 (714)
T ss_pred CCCccccCcCHHHHhhccc-CCHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCeeecHHHHHHHhCCEEEEeCCCEEecc
Confidence 5689999999999853211 112223344455567888999999999999999999999999999999999999999999
Q ss_pred CCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHHHHH
Q 019602 101 ENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVAL 180 (338)
Q Consensus 101 e~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~ 180 (338)
|+++|++|++|++++|+|++|.. ++++|++||++++ |++|+++||||+++|++++.+.+.++++......+
T Consensus 139 Ev~lGl~Pg~Ggt~rL~rliG~~-~A~~llltG~~~~-A~eA~~~GLvd~vv~~~~l~~~a~~~a~~~~~~~~------- 209 (714)
T TIGR02437 139 ETKLGIMPGFGGTVRLPRVIGAD-NALEWIASGKENR-AEDALKVGAVDAVVTADKLGAAALQLLKDAINGKL------- 209 (714)
T ss_pred hhhcCCCCCccHHHHHHHHhCHH-HHHHHHHcCCcCC-HHHHHHCCCCcEeeChhHHHHHHHHHHHHHhhcCC-------
Confidence 99999999999999999999998 9999999999999 99999999999999999999888877653111000
Q ss_pred HHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHH-HHHHHhccCchHHHHHHHHHHHHh
Q 019602 181 LAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADE-ALQGMGKGAPFSLCLTQKYFSKVA 259 (338)
Q Consensus 181 l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~-~~~~l~~~sp~al~~~k~~l~~~~ 259 (338)
............+ ....+.++|. .+.+.+ ..++-...-|.- ..+.+.+..+.
T Consensus 210 -~~~~~~~~~~~~~--~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~pap-~~~~~~v~~~~ 262 (714)
T TIGR02437 210 -DWKAKRQPKLEPL--KLSKIEAMMS-----------------------FTTAKGMVAQVAGPHYPAP-MTAVKTIEKAA 262 (714)
T ss_pred -cccccCCCCcccc--cccchHHHHH-----------------------HHHHHHHHHHhhcCCCCCH-HHHHHHHHHHh
Confidence 0000000000000 0011112111 122232 222333332222 23345777666
Q ss_pred hhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCC
Q 019602 260 SAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDK 303 (338)
Q Consensus 260 ~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK 303 (338)
..+++++++.|.+.+..++.+++.+..++.|+.++
T Consensus 263 ---------~~~~~~gl~~E~~~f~~l~~s~~a~~l~~~ff~~r 297 (714)
T TIGR02437 263 ---------RFGRDKALEIEAKGFVKLAKTSEAKALIGLFLNDQ 297 (714)
T ss_pred ---------cCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHhhhH
Confidence 66799999999999999999999999999998754
No 84
>PRK08272 enoyl-CoA hydratase; Provisional
Probab=99.97 E-value=7e-32 Score=256.48 Aligned_cols=164 Identities=16% Similarity=0.157 Sum_probs=134.3
Q ss_pred cCCCCeEEcCCChhHHhhhhccC--C-----------------hHHH--HHHHHHHHHHHHHHhhCCCcEEEEecCccch
Q 019602 19 SFPNNAVICGQSPLNHLQSTTQN--Q-----------------LSEM--IEVFTAEYSLICKISEYKKPYISLMDGVTMG 77 (338)
Q Consensus 19 s~~~~~F~aG~Dl~~~~~~~~~~--~-----------------~~~~--~~~~~~~~~~~~~i~~~pkPvIaavnG~a~G 77 (338)
+..|++||+|+||.++....... + .... ..++.....++.+|.++||||||+|||+|+|
T Consensus 61 ~G~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~G 140 (302)
T PRK08272 61 SGAGKGFCAGYDLSAYAEGSSSGGGGGAYPGKRQAVNHLPDDPWDPMIDYQMMSRFVRGFMSLWHAHKPTVAKVHGYCVA 140 (302)
T ss_pred EcCCCCcccCcCHHHHhhcccccccccccccccccccccccccccchhhHHHHHHHHHHHHHHHhCCCCEEEEEccEeeh
Confidence 34678999999999885321100 0 0000 1223445567888999999999999999999
Q ss_pred hhhHhhhcCCeEEEeCCeEEeCCCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCCh
Q 019602 78 FGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNL 157 (338)
Q Consensus 78 gG~~Lal~cD~rias~~a~f~~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l 157 (338)
||++|+++||+|||+++++|++||+++|.+|+.+ .+++++|++ ++++|++||++++ |+||+++||||++||++++
T Consensus 141 gG~~lalacD~~ias~~a~f~~pe~~~gg~~~~~---~~~~~vG~~-~A~~llltG~~i~-a~eA~~~GLv~~vv~~~~l 215 (302)
T PRK08272 141 GGTDIALHCDQVIAADDAKIGYPPTRVWGVPATG---MWAYRLGPQ-RAKRLLFTGDCIT-GAQAAEWGLAVEAVPPEEL 215 (302)
T ss_pred hhHHHHHhCCEEEEeCCCEecCcchhcccCChHH---HHHHHhhHH-HHHHHHHcCCccC-HHHHHHcCCCceecCHHHH
Confidence 9999999999999999999999999986666532 567789998 9999999999999 9999999999999998877
Q ss_pred HHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHH
Q 019602 158 GSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEAL 237 (338)
Q Consensus 158 ~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~ 237 (338)
.+.+ .++|+
T Consensus 216 ~~~a--------------------------------------------------------------------~~la~--- 224 (302)
T PRK08272 216 DERT--------------------------------------------------------------------ERLVE--- 224 (302)
T ss_pred HHHH--------------------------------------------------------------------HHHHH---
Confidence 7654 35677
Q ss_pred HHHhccCchHHHHHHHHHHHHh
Q 019602 238 QGMGKGAPFSLCLTQKYFSKVA 259 (338)
Q Consensus 238 ~~l~~~sp~al~~~k~~l~~~~ 259 (338)
+|+..||.+++.+|++++..+
T Consensus 225 -~ia~~~~~a~~~~K~~l~~~~ 245 (302)
T PRK08272 225 -RIAAVPVNQLAMVKLAVNSAL 245 (302)
T ss_pred -HHHcCCHHHHHHHHHHHHHHH
Confidence 999999999999999999876
No 85
>KOG0016 consensus Enoyl-CoA hydratase/isomerase [Lipid transport and metabolism]
Probab=99.97 E-value=7.3e-31 Score=236.43 Aligned_cols=200 Identities=17% Similarity=0.186 Sum_probs=173.2
Q ss_pred cCCCCeEEcCCChhHHhhhhccCChHHHHHHH---HHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCe
Q 019602 19 SFPNNAVICGQSPLNHLQSTTQNQLSEMIEVF---TAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKT 95 (338)
Q Consensus 19 s~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a 95 (338)
+..|++||+|.|+..+......+..+...... ....-+...+..+|||+||+|||+|+|-|+.+.-.||+++|++++
T Consensus 59 s~~G~~f~sG~Df~~~~~~~~~d~~~~~~~~~~~v~~~~~~v~~fi~f~Kplia~vNGPAIGlgasil~lcD~V~A~Dka 138 (266)
T KOG0016|consen 59 SSNGSYFCSGLDFSPFAKALDDDANEESDKASKFVKNVSCFVNTFINFPKPLVALVNGPAIGLGASILPLCDYVWASDKA 138 (266)
T ss_pred ecCccEEeeccccchhhhcCCCcccccchhhHHHHHHHHHHHHHHhcCCCCEEEEecCCccchhhHHhhhhheEEeccce
Confidence 45789999999999987543333222222222 222236778899999999999999999999999999999999999
Q ss_pred EEeCCCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchh
Q 019602 96 LLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQ 175 (338)
Q Consensus 96 ~f~~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~ 175 (338)
+|..|++.+|++|++++++++|+++|.. .|.+|++.|++++ |.||...|||+++++++.+.+.+.
T Consensus 139 ~F~TPfa~lGq~PEG~Ss~t~p~imG~~-~A~E~ll~~~klt-A~Ea~~~glVskif~~~tf~~~v~------------- 203 (266)
T KOG0016|consen 139 WFQTPFAKLGQSPEGCSSVTLPKIMGSA-SANEMLLFGEKLT-AQEACEKGLVSKIFPAETFNEEVL------------- 203 (266)
T ss_pred EEeccchhcCCCCCcceeeeehHhhchh-hHHHHHHhCCccc-HHHHHhcCchhhhcChHHHHHHHH-------------
Confidence 9999999999999999999999999998 9999999999999 999999999999999877766542
Q ss_pred HHHHHHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHH
Q 019602 176 DIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYF 255 (338)
Q Consensus 176 ~~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l 255 (338)
+.++++.+.+|.+++..|+++
T Consensus 204 -----------------------------------------------------------~~ikq~s~l~p~sl~~~K~L~ 224 (266)
T KOG0016|consen 204 -----------------------------------------------------------KKIKQYSKLSPESLLGMKKLL 224 (266)
T ss_pred -----------------------------------------------------------HHHHHHhcCCHHHHHHHHHHH
Confidence 223378889999999999999
Q ss_pred HHHhhhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhc
Q 019602 256 SKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLV 301 (338)
Q Consensus 256 ~~~~~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~ 301 (338)
+... ...+.++.+.|...+...|.++|+.+.+.+|+.
T Consensus 225 rs~~---------k~~l~~an~~E~~~l~~~W~s~e~~~~~~~~~~ 261 (266)
T KOG0016|consen 225 RSNI---------KEELIKANEEECNVLLKQWVSAECLARFKQYLS 261 (266)
T ss_pred HHHH---------HHHHHHhhHHHHHHHHhhccChHHHHHHHHHhc
Confidence 9988 778999999999999999999999999999995
No 86
>PLN02267 enoyl-CoA hydratase/isomerase family protein
Probab=99.97 E-value=1.6e-30 Score=239.34 Aligned_cols=138 Identities=15% Similarity=0.156 Sum_probs=113.0
Q ss_pred cCCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEe-CCeEE
Q 019602 19 SFPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVT-EKTLL 97 (338)
Q Consensus 19 s~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias-~~a~f 97 (338)
+..|++||+|+|++++... .........+......++.++.++||||||+|||+|+|||++|+++||+|||+ ++++|
T Consensus 51 ~g~g~~FsaG~Dl~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~lalacD~ria~~~~a~f 128 (239)
T PLN02267 51 TAEGKFFSNGFDLAWAQAA--GSAPSRLHLMVAKLRPLVADLISLPMPTIAAVTGHASAAGFILALSHDYVLMRKDRGVL 128 (239)
T ss_pred cCCCCceeCCcCHHHHhcc--ccCHHHHHHHHHHHHHHHHHHhcCCCCEEEEECCcchHHHHHHHHHCCEEEecCCCCeE
Confidence 5567899999999886421 11111222333445667889999999999999999999999999999999998 56899
Q ss_pred eCCCCCcCcC-CCchHHHHHhcCCCChHHH-HHHhhcCCCCCcHHHHHHcCccceecCC-CChHHHH
Q 019602 98 AMPENGIGLF-PDVGFSYIAAKGPGGGSVG-AYLGMTGKRISTPSDALFAGLGTDYVPS-GNLGSLK 161 (338)
Q Consensus 98 ~~pe~~lGl~-P~~g~~~~l~rl~G~~~~a-~~llltg~~~~~a~eA~~~GLv~~vv~~-~~l~~~~ 161 (338)
++||+++|++ |++ ++.++++++|.. ++ ++|+++|++++ |+||+++||||+++|+ +++.+.+
T Consensus 129 ~~pe~~~Gl~~p~~-~~~~l~~~vG~~-~a~~~llltG~~~~-a~eA~~~Glv~~vv~~~~~l~~~a 192 (239)
T PLN02267 129 YMSEVDIGLPLPDY-FMALLRAKIGSP-AARRDVLLRAAKLT-AEEAVEMGIVDSAHDSAEETVEAA 192 (239)
T ss_pred eccccccCCCCChH-HHHHHHHHcChH-HHHHHHHHcCCcCC-HHHHHHCCCcceecCCHHHHHHHH
Confidence 9999999997 555 477999999987 88 69999999999 9999999999999985 4566544
No 87
>TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial. Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human, pig, and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16).
Probab=99.97 E-value=8.5e-30 Score=267.08 Aligned_cols=240 Identities=18% Similarity=0.160 Sum_probs=165.7
Q ss_pred ccCCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCC--e
Q 019602 18 SSFPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEK--T 95 (338)
Q Consensus 18 ~s~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~--a 95 (338)
.+..|++||+|+|++++... .+......+......++.+|..+||||||+|||+|+|||++|+++||||||+++ +
T Consensus 65 ltg~g~~F~aG~Dl~~~~~~---~~~~~~~~~~~~~~~l~~~i~~~~kPvIAav~G~a~GgG~eLALacD~ria~~~a~a 141 (737)
T TIGR02441 65 ISGKPGSFVAGADIQMIAAC---KTAQEVTQLSQEGQEMFERIEKSQKPIVAAISGSCLGGGLELALACHYRIATKDRKT 141 (737)
T ss_pred EECCCCcceeCcCHHHHhcc---CChHHHHHHHHHHHHHHHHHHhCCCCEEEEECCEeecHHHHHHHhCCEEEEcCCCCC
Confidence 35678899999999998631 122233345555667888999999999999999999999999999999999987 5
Q ss_pred EEeCCCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCC-------------CChHHHHH
Q 019602 96 LLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPS-------------GNLGSLKE 162 (338)
Q Consensus 96 ~f~~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~-------------~~l~~~~~ 162 (338)
+|++||+++|++|++|++++|+|++|.. ++++|++||++++ |++|+++||||+|+|+ +.+.+.+.
T Consensus 142 ~fglpEv~lGl~Pg~Ggt~rLprliG~~-~A~~l~ltG~~i~-a~eA~~~GLVd~vv~~~~~~~~~l~~~~~~~l~~~A~ 219 (737)
T TIGR02441 142 LLGLPEVMLGLLPGAGGTQRLPKLTGVP-AALDMMLTGKKIR-ADRAKKMGIVDQLVDPLGPGLKPAEENTIEYLEEVAV 219 (737)
T ss_pred eEecchhhhCCCCCccHhhhHHHhhCHH-HHHHHHHcCCcCC-HHHHHHCCCCeEecCCcccccccchhhhHHHHHHHHH
Confidence 8999999999999999999999999998 9999999999999 9999999999999986 12333333
Q ss_pred HHHhcccCCCchhHHHHHHH-hhcCCCCCCccccccchhhh-hhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHH
Q 019602 163 ALLAVTFSEDPHQDIVALLA-KYSSDPEGEAPLKLLLPQIT-SCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGM 240 (338)
Q Consensus 163 ~l~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~l~~~~~~i~-~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l 240 (338)
++++. +.. ....+.. . ... +-+. .....+.....+++ .+.+...+-
T Consensus 220 ~~a~~------------l~~~~~~~~~~-~-~~~---~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~ 267 (737)
T TIGR02441 220 KFAQG------------LANGKLSINRD-K-GLV---HKITQYVMTNPFVRQQVYK---------------TAEDKVMKQ 267 (737)
T ss_pred HHHHH------------hhcccCCcccc-c-ccc---CccchhhcccchhHHHHHH---------------HHHHHHHHh
Confidence 33221 000 0000000 0 000 0000 00000000111111 122111111
Q ss_pred hccCchHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCC
Q 019602 241 GKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDK 303 (338)
Q Consensus 241 ~~~sp~al~~~k~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK 303 (338)
.+.-..+-..+.+.+..+. ..+++++++.|.+.+..++.+++.+.-++.|+.++
T Consensus 268 ~~g~~~Ap~~~l~~v~~~~---------~~~~~~gl~~E~~~f~~l~~s~~a~al~~~f~~~~ 321 (737)
T TIGR02441 268 TKGLYPAPLKILDVVRTGY---------DQGPDAGYEAESKAFGELSMTFESKALIGLFHGQT 321 (737)
T ss_pred ccCCCccHHHHHHHHHHHh---------cCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 2221223334456776665 66899999999999999999999999999998765
No 88
>KOG1682 consensus Enoyl-CoA isomerase [Lipid transport and metabolism]
Probab=99.97 E-value=1.4e-29 Score=220.17 Aligned_cols=206 Identities=19% Similarity=0.281 Sum_probs=177.6
Q ss_pred cccCCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeE
Q 019602 17 ISSFPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTL 96 (338)
Q Consensus 17 ~~s~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~ 96 (338)
|.+..|+.||+|.||+++-.. .+ .+...+.|+.+.+++.-|+++|+|||+.|||.+.+.|+.|...||++||+++++
T Consensus 81 iita~GkifSaGH~LKELt~e--~g-~d~haevFqtc~dvmn~Irn~pVPVia~VNG~AaAAGcQLVaSCD~vVa~k~Sk 157 (287)
T KOG1682|consen 81 IITAQGKIFSAGHNLKELTNE--PG-SDIHAEVFQTCTDVMNDIRNLPVPVIAKVNGYAAAAGCQLVASCDMVVATKNSK 157 (287)
T ss_pred EEecCCccccccccHHHhhcC--cc-chHHHHHHHHHHHHHHHHhcCCCceEEEecchhhhccceEEEeeeEEEEecCcc
Confidence 456689999999999998632 11 123457788899999999999999999999999999999999999999999999
Q ss_pred EeCCCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhH
Q 019602 97 LAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQD 176 (338)
Q Consensus 97 f~~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~ 176 (338)
|..|...+|++...-+. -|.|.+.+. .+.+|++||.+++ ++||+..|||+++||+++++-.+++
T Consensus 158 F~tPG~~vGlFCSTPGv-AlaRavpRk-va~~ML~Tg~Pi~-~eeAl~sGlvskvVp~~el~~e~~~------------- 221 (287)
T KOG1682|consen 158 FSTPGAGVGLFCSTPGV-ALARAVPRK-VAAYMLMTGLPIT-GEEALISGLVSKVVPAEELDKEIEE------------- 221 (287)
T ss_pred ccCCCCceeeEecCcch-hHhhhcchh-HHHHHHHhCCCCc-hHHHHHhhhhhhcCCHHHHHHHHHH-------------
Confidence 99999999998654433 567777777 9999999999999 9999999999999999998876543
Q ss_pred HHHHHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHH
Q 019602 177 IVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFS 256 (338)
Q Consensus 177 ~~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~ 256 (338)
.+. +|...|...+.+.|+.+.
T Consensus 222 -------------------------------------------------------i~~----~i~~~srav~slgk~f~y 242 (287)
T KOG1682|consen 222 -------------------------------------------------------ITN----AIKAKSRAVISLGKEFYY 242 (287)
T ss_pred -------------------------------------------------------HHH----HHhhhHHHHHHHHHHHHH
Confidence 333 677778888889999888
Q ss_pred HHhhhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCCCCCCCCCC
Q 019602 257 KVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNP 311 (338)
Q Consensus 257 ~~~~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK~r~p~w~~ 311 (338)
... .++-.+++....+.+..-++-.|.+||+.+|+ +| |+|.|.+
T Consensus 243 ~q~---------~ms~~ea~~~~~~~m~~n~ql~d~kegiasf~-~k-rp~~~~h 286 (287)
T KOG1682|consen 243 KQL---------AMSQAEAFSAAQEKMCENFQLGDTKEGIASFF-EK-RPPNWKH 286 (287)
T ss_pred HHH---------HHhHHHHHHHHHHHHhhcccccchHHHHHHHh-cc-CCCCcCC
Confidence 776 67788899999999999999999999999999 79 8999986
No 89
>cd06558 crotonase-like Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. Many of these play important roles in fatty acid metabolism. In addition to a conserved structural core and the formation of trimers (or dimers of trimers), a common feature in this superfamily is the stabilization of an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two conserved backbone NH groups in active sites that form an oxyanion hole.
Probab=99.95 E-value=6.7e-28 Score=214.21 Aligned_cols=142 Identities=24% Similarity=0.295 Sum_probs=127.1
Q ss_pred CCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeCC
Q 019602 21 PNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMP 100 (338)
Q Consensus 21 ~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~p 100 (338)
.++.||+|+|+.++....... +...++.+..+.++.++..+||||||+|||+|+|+|+.++++||+||++++++|++|
T Consensus 52 ~~~~Fs~G~dl~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~p~Ia~v~G~a~g~G~~la~~~D~~i~~~~~~~~~p 129 (195)
T cd06558 52 AGKAFCAGADLKELAALSDAG--EEARAFIRELQELLRALLRLPKPVIAAVNGAALGGGLELALACDIRIAAEDAKFGLP 129 (195)
T ss_pred CCCceEeCcCHHHHhcccccc--hhHHHHHHHHHHHHHHHHcCCCCEEEEECCeeecHHHHHHHhCCEEEecCCCEEech
Confidence 388999999999987422111 124567777888999999999999999999999999999999999999999999999
Q ss_pred CCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHh
Q 019602 101 ENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLA 166 (338)
Q Consensus 101 e~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~ 166 (338)
|+++|++|++|++++|++++|.+ .+++++++|+.++ ++||+++||++++++.+++.+.+.++++
T Consensus 130 e~~~G~~p~~g~~~~l~~~~g~~-~a~~~~l~g~~~~-a~ea~~~Glv~~~~~~~~l~~~a~~~a~ 193 (195)
T cd06558 130 EVKLGLVPGGGGTQRLPRLVGPA-RARELLLTGRRIS-AEEALELGLVDEVVPDEELLAAALELAR 193 (195)
T ss_pred hhhcCCCCCCcHHHHHHHHhCHH-HHHHHHHcCCccC-HHHHHHcCCCCeecChhHHHHHHHHHHh
Confidence 99999999999999999999987 9999999999999 9999999999999999888888877654
No 90
>TIGR03222 benzo_boxC benzoyl-CoA-dihydrodiol lyase. In the presence of O2, the benzoyl-CoA oxygenase/reductase BoxBA BoxAB converts benzoyl-CoA to 2,3-dihydro-2,3-dihydroxybenzoyl-CoA. Members of this family, BoxC, homologous to enoyl-CoA hydratases/isomerases, hydrolyze this compound to 3,4-dehydroadipyl-CoA semialdehyde + HCOOH.
Probab=99.95 E-value=2.7e-27 Score=239.28 Aligned_cols=146 Identities=11% Similarity=0.065 Sum_probs=118.7
Q ss_pred ccCCCCeEEcCCChhHHhhhhccCChHHHHHHHHH-HHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCC--
Q 019602 18 SSFPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTA-EYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEK-- 94 (338)
Q Consensus 18 ~s~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~-- 94 (338)
++.+|++||+|+|+.++....... ......+... ...+...+..+||||||+|||+|+|||++|+++||+||++++
T Consensus 73 tg~~Gk~FcaG~DL~~~~~~~~~~-~~~~~~~~~~~~~~i~~~i~~~pkPvIAAVnG~a~GGG~~LALacD~rvAs~~a~ 151 (546)
T TIGR03222 73 TSGKDRVFCSGANIFMLGLSTHAW-KVNFCKFTNETRNGIEDSSRHSGLKFLAAVNGTCAGGGYELALACDEIMLVDDRS 151 (546)
T ss_pred ecCCCCCCcCCcCHHHHhccccch-hhhHHHHHHHHHHHHHHHHHhCCCCEEEEECCEeehHHHHHHHhCCEEEEecCCC
Confidence 455578999999999875211111 1111111111 123555778999999999999999999999999999999986
Q ss_pred eEEeCCCCC-cCcCCCchHHHHHh--cCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHh
Q 019602 95 TLLAMPENG-IGLFPDVGFSYIAA--KGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLA 166 (338)
Q Consensus 95 a~f~~pe~~-lGl~P~~g~~~~l~--rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~ 166 (338)
++|++||++ +|++|++|++.+++ +.+|.. ++++|++||++++ |+||+++||||++||++++.+.+.++++
T Consensus 152 a~f~~pEv~~lGl~P~~gg~~~l~~~~~vg~~-~A~~llltG~~i~-A~eA~~~GLV~~vv~~~~l~~~a~~lA~ 224 (546)
T TIGR03222 152 SSVSLPEVPLLGVLPGTGGLTRVTDKRRVRRD-HADIFCTIEEGVR-GKRAKEWRLVDEVVKPSQFDAAIAERAA 224 (546)
T ss_pred cEEEccchhccCcCCccchhhhccccchhCHH-HHHHHHHcCCCcc-HHHHHHcCCceEEeChHHHHHHHHHHHH
Confidence 799999997 99999999998887 689997 9999999999999 9999999999999999999888876655
No 91
>PRK08184 benzoyl-CoA-dihydrodiol lyase; Provisional
Probab=99.94 E-value=9.3e-27 Score=236.02 Aligned_cols=146 Identities=11% Similarity=0.090 Sum_probs=118.0
Q ss_pred ccCCCCeEEcCCChhHHhhhhccCChHHHHHHHHHH-HHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCC--
Q 019602 18 SSFPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAE-YSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEK-- 94 (338)
Q Consensus 18 ~s~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~-- 94 (338)
++.++++||+|+|+..+....... ......+.+.. ..+...+..+||||||+|||+|+|||++|+++|||||++++
T Consensus 77 tg~ggk~FcaG~DL~~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~pkPvIAAVnG~a~GGG~~LALacD~rIas~~~~ 155 (550)
T PRK08184 77 TSAKDRVFCSGANIFMLGGSSHAW-KVNFCKFTNETRNGIEDSSRHSGLKFIAAVNGTCAGGGYELALACDEIVLVDDRS 155 (550)
T ss_pred ecCCCCCCCCccCHHhHhccccch-hhhHHHHHHHHHHHHHHHHHhCCCCEEEEECCEeehHHHHHHHhCCEEEEecCCC
Confidence 344568999999999875311110 01111111111 12445778999999999999999999999999999999987
Q ss_pred eEEeCCCCC-cCcCCCchHHHHHh--cCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHh
Q 019602 95 TLLAMPENG-IGLFPDVGFSYIAA--KGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLA 166 (338)
Q Consensus 95 a~f~~pe~~-lGl~P~~g~~~~l~--rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~ 166 (338)
++|++||++ +|++|++|++.+++ +++|.. ++++|++||+.++ |+||+++|||+++||++++.+.+.++++
T Consensus 156 a~fg~pEv~~~Gl~P~~gg~~rl~~~~~vg~~-~A~~llltG~~i~-AeeA~~~GLVd~vv~~d~l~~~a~~~A~ 228 (550)
T PRK08184 156 SAVSLPEVPLLGVLPGTGGLTRVTDKRKVRRD-LADIFCTIEEGVR-GKRAVDWRLVDEVVKPSKFDAKVAERAA 228 (550)
T ss_pred cEEEccchhccccCCCcchHHHhhhhhhcCHH-HHHHHHHhCCccc-HHHHHHcCCccEeeCHHHHHHHHHHHHH
Confidence 899999997 99999999999888 779998 9999999999999 9999999999999999988888766554
No 92
>PF13766 ECH_C: 2-enoyl-CoA Hydratase C-terminal region; PDB: 3JU1_A 3BPT_A.
Probab=99.89 E-value=6.7e-23 Score=168.60 Aligned_cols=117 Identities=44% Similarity=0.760 Sum_probs=100.1
Q ss_pred ccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHHHhhhcCCCccccCCHH
Q 019602 194 LKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLS 273 (338)
Q Consensus 194 l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~~~~~~~~~~~~~~~l~ 273 (338)
|...++.|++||+.+ |++||++.|++.. .+||.++++.|.++||+|+++|+++++++. ..+++
T Consensus 2 L~~~~~~I~~~F~~~-s~~eI~~~L~~~~-------~~~a~~~~~~l~~~SP~Sl~vt~~~l~~~~---------~~sl~ 64 (118)
T PF13766_consen 2 LAEHLEAIDRCFSAD-SVEEIIEALEADG-------DEWAQKTLETLRSGSPLSLKVTFEQLRRGR---------NLSLA 64 (118)
T ss_dssp CHHCHHHHHHHTTSS-SHHHHHHHHHHHS--------HHHHHHHHHHCCS-HHHHHHHHHHHHCCT---------TS-HH
T ss_pred hHHHHHHHHHHhCCC-CHHHHHHHHHccC-------cHHHHHHHHHHHHCCHHHHHHHHHHHHHhh---------hCCHH
Confidence 446788999999976 9999999999944 689999999999999999999999999988 78999
Q ss_pred HHHHHHHHHHhhhCCCCCHHHHHHhhhcCCCCCCCCCCCCcCCCCHHHHHhhhc
Q 019602 274 GVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFE 327 (338)
Q Consensus 274 ~~l~~e~~~~~~~~~~~d~~eg~~afl~eK~r~p~w~~~~~~~v~~~~v~~~~~ 327 (338)
+++++|+++..+++.++||.|||||.|++|++.|+|+++++++|+++.|+.+|+
T Consensus 65 e~l~~E~~~a~~~~~~~DF~EGVRA~LIDKd~~P~W~p~~l~~V~~~~V~~~f~ 118 (118)
T PF13766_consen 65 ECLRMEYRLASRCMRHPDFAEGVRALLIDKDKNPKWSPASLEDVSDEDVDSFFE 118 (118)
T ss_dssp HHHHHHHHHHHHHHCCSCHHHHHHHHTTS-------SSSSCCCS-HHHHHHHCS
T ss_pred HHHHHHHHHHHHHhccchHHHHHHHHHhcCCCCCCCCCCChHHCCHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999999999985
No 93
>cd07020 Clp_protease_NfeD_1 Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease. Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentially c
Probab=99.69 E-value=8.1e-17 Score=142.99 Aligned_cols=103 Identities=11% Similarity=-0.070 Sum_probs=88.9
Q ss_pred HHHHHHhhCCCcEEEEec---CccchhhhHhhhcCCeEEEeCCeEEeCCCCCcCcCCCc--------------hHHHHHh
Q 019602 55 SLICKISEYKKPYISLMD---GVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDV--------------GFSYIAA 117 (338)
Q Consensus 55 ~~~~~i~~~pkPvIaavn---G~a~GgG~~Lal~cD~rias~~a~f~~pe~~lGl~P~~--------------g~~~~l~ 117 (338)
.++.+|..+|||||++|+ |+|+|||+.|+++||++|++++++|+.+++..|..+.. +....++
T Consensus 49 ~i~~~l~~~~kPvia~v~~~~G~AasgG~~iala~D~iva~p~a~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (187)
T cd07020 49 EIVQAILASPVPVVVYVYPSGARAASAGTYILLAAHIAAMAPGTNIGAAHPVAIGGGGGSDPVMEKKILNDAVAYIRSLA 128 (187)
T ss_pred HHHHHHHhCCCCEEEEEecCCCCchhHHHHHHHhCCceeECCCCcEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 456677889999999999 99999999999999999999999999999985554432 3455788
Q ss_pred cCCCC--hHHHHHHhhcCCCCCcHHHHHHcCccceecCCC-ChHH
Q 019602 118 KGPGG--GSVGAYLGMTGKRISTPSDALFAGLGTDYVPSG-NLGS 159 (338)
Q Consensus 118 rl~G~--~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~-~l~~ 159 (338)
+..|. . .+++++++|+.|+ |+||+++||||+++++. ++..
T Consensus 129 ~~~G~~~~-~a~~~l~~g~~~~-a~eA~~~Glvd~v~~~~~~~~~ 171 (187)
T cd07020 129 ELRGRNAE-WAEKAVRESLSLT-AEEALKLGVIDLIAADLNELLK 171 (187)
T ss_pred HHcCCCHH-HHHHHHHcCCeec-HHHHHHcCCcccccCCHHHHHH
Confidence 88887 5 8899999999999 99999999999999876 4554
No 94
>cd07014 S49_SppA Signal peptide peptidase A. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppA is an intramembrane enzyme found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown these bacterial, archaeal and thylakoid SppAs to be ClpP-like serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain, cleaving peptide bonds in the plane of the lipid bilayer. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad (both residues absolutely conserved within bacteria, chloroplast and mitochondrial signal peptidase family members) and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases. In addition to the carboxyl-terminal p
Probab=99.61 E-value=8.5e-16 Score=135.18 Aligned_cols=103 Identities=16% Similarity=-0.017 Sum_probs=85.2
Q ss_pred HHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeCCCCCcCcCCCchHHH--------HHhcCCC--ChH
Q 019602 55 SLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSY--------IAAKGPG--GGS 124 (338)
Q Consensus 55 ~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~pe~~lGl~P~~g~~~--------~l~rl~G--~~~ 124 (338)
+++..+..++|||||++||.|.|||+.|+++||++++++.++|+++.+..+..+...... .+++..| ..
T Consensus 62 ~~i~~~~~~~kpVia~v~G~a~g~g~~la~a~D~i~a~~~a~~~~~G~~~~~~~~~~~l~~~~~~~~~~v~~~rg~~~~- 140 (177)
T cd07014 62 AELAAARAAGKPVVASGGGNAASGGYWISTPANYIVANPSTLVGSIGIFGVQLADQLSIENGYKRFITLVADNRHSTPE- 140 (177)
T ss_pred HHHHHHHhCCCCEEEEECCchhHHHHHHHHhCCEEEECCCCeEEEechHhhHHHHHHHHHHHHHHHHHHHHHhCCCCHH-
Confidence 466678889999999999999999999999999999999999999988777543322222 4444545 65
Q ss_pred HHHHHhhcCCCCCcHHHHHHcCccceecCCCChHH
Q 019602 125 VGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGS 159 (338)
Q Consensus 125 ~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~ 159 (338)
..++++..|..++ |++|++.||||++.+.+++..
T Consensus 141 ~~~~~l~~g~~~~-a~~A~~~GLVD~v~~~~e~~~ 174 (177)
T cd07014 141 QQIDKIAQGGVWT-GQDAKANGLVDSLGSFDDAVA 174 (177)
T ss_pred HhHHHhcCcCeEe-HHHHHHcCCcccCCCHHHHHH
Confidence 7889999999999 999999999999998766554
No 95
>cd07016 S14_ClpP_1 Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease. Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. This subfamily only contains bacterial sequences. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which a
Probab=99.38 E-value=1.7e-12 Score=112.19 Aligned_cols=95 Identities=13% Similarity=0.117 Sum_probs=78.7
Q ss_pred HHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeCCCCCcCcCCCch---------------HHHHHhcC
Q 019602 55 SLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVG---------------FSYIAAKG 119 (338)
Q Consensus 55 ~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~pe~~lGl~P~~g---------------~~~~l~rl 119 (338)
.+...|..++||||+.++|.|.|+|+.|+++||+|+++++++|++.....|..+... ....+.+.
T Consensus 49 ~i~~~i~~~~~pvi~~v~g~a~s~g~~ia~a~d~~~~~~~a~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~ 128 (160)
T cd07016 49 AIYNALKRHKGKVTVKIDGLAASAASVIAMAGDEVEMPPNAMLMIHNPSTGAAGNADDLRKAADLLDKIDESIANAYAEK 128 (160)
T ss_pred HHHHHHHhcCCCEEEEEcchHHhHHHHHHhcCCeEEECCCcEEEEECCccccCcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567778889999999999999999999999999999999999999877766554432 12336677
Q ss_pred CC--ChHHHHHHhhcCCCCCcHHHHHHcCcccee
Q 019602 120 PG--GGSVGAYLGMTGKRISTPSDALFAGLGTDY 151 (338)
Q Consensus 120 ~G--~~~~a~~llltg~~~~~a~eA~~~GLv~~v 151 (338)
.| .. ...+++.++..++ ++||+++||||+|
T Consensus 129 ~g~~~~-~i~~~~~~~~~l~-a~eA~~~GliD~v 160 (160)
T cd07016 129 TGLSEE-EISALMDAETWLT-AQEAVELGFADEI 160 (160)
T ss_pred hCCCHH-HHHHHHhCCeECc-HHHHHHcCCCCcC
Confidence 77 44 7777777778899 9999999999975
No 96
>cd07019 S49_SppA_1 Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppAs in this subfamily are found in all three domains of life and are involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Site-directed mutagenesis and sequence analysis have shown these bacterial, archaeal and thylakoid SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad (both residues absolutely conserved within bacteria, chloroplast and mitochondrial signal peptidase family members) and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases. In addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members, the E. coli SppA contains an amino-te
Probab=99.17 E-value=3.7e-11 Score=108.65 Aligned_cols=61 Identities=18% Similarity=0.099 Sum_probs=51.0
Q ss_pred CeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeC
Q 019602 23 NAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAM 99 (338)
Q Consensus 23 ~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~ 99 (338)
..||+|+|+..+. ..++.+..++.++|||||+++|+|.|+|+.|+++||++++++.++|+.
T Consensus 45 ~~~s~Gg~~~~~~----------------~~~~~l~~~~~~~kpVia~v~g~a~s~gy~la~~aD~i~a~~~a~~gs 105 (211)
T cd07019 45 RVNSPGGSVTASE----------------VIRAELAAARAAGKPVVVSAGGAAASGGYWISTPANYIVANPSTLTGS 105 (211)
T ss_pred EEcCCCcCHHHHH----------------HHHHHHHHHHhCCCCEEEEECCeehhHHHHHHHhCCEEEEcCCCEEEE
Confidence 4899999986642 112345678889999999999999999999999999999999988863
No 97
>cd00394 Clp_protease_like Caseinolytic protease (ClpP) is an ATP-dependent protease. Clp protease (caseinolytic protease; ClpP; endopeptidase Clp; Peptidase S14; ATP-dependent protease, ClpAP)-like enzymes are highly conserved serine proteases and belong to the ClpP/Crotonase superfamily. Included in this family are Clp proteases that are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. The functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of protease activity in the presence of ATP. Active site consists of the triad Ser, His and Asp, preferring hydrophobic or non-polar residues at P1 or P1' positions. The protease exists as a tetradec
Probab=99.10 E-value=3.6e-10 Score=97.54 Aligned_cols=94 Identities=14% Similarity=0.026 Sum_probs=71.5
Q ss_pred HHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeCCCCCcCcCCCc--h--------HH---HHHh-----
Q 019602 56 LICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDV--G--------FS---YIAA----- 117 (338)
Q Consensus 56 ~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~pe~~lGl~P~~--g--------~~---~~l~----- 117 (338)
+...|..++||||+.++|.|.++|+.|+++||.|++.+++.|++..+..+..... . .. ..+.
T Consensus 49 i~~~l~~~~kpvva~~~g~~~s~g~~la~~~d~~~~~~~a~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~ 128 (161)
T cd00394 49 IVDALQASRKPVIAYVGGQAASAGYYIATAANKIVMAPGTRVGSHGPIGGYGGNGNPTAQEADQRIILYFIARFISLVAE 128 (161)
T ss_pred HHHHHHHhCCCEEEEECChhHHHHHHHHhCCCEEEECCCCEEEEeeeEEecCCCCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556777889999999999999999999999999999999999988876654321 0 00 0111
Q ss_pred -cCCCChHHHHHHhhcCCCCCcHHHHHHcCcccee
Q 019602 118 -KGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDY 151 (338)
Q Consensus 118 -rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~v 151 (338)
|-.... ...+++..|..++ ++||+++||||++
T Consensus 129 ~r~~~~~-~~~~~~~~~~~~~-a~eA~~~GLvD~i 161 (161)
T cd00394 129 NRGQTTE-KLEEDIEKDLVLT-AQEALEYGLVDAL 161 (161)
T ss_pred hcCCCHH-HHHHHhcCCcEEc-HHHHHHcCCcCcC
Confidence 112222 3567777899999 9999999999975
No 98
>TIGR00705 SppA_67K signal peptide peptidase SppA, 67K type. E. coli SohB, which is most closely homologous to the C-terminal duplication of SppA, is predicted to perform a similar function of small peptide degradation, but in the periplasm. Many prokaryotes have a single SppA/SohB homolog that may perform the function of either or both.
Probab=99.03 E-value=3.8e-10 Score=116.34 Aligned_cols=103 Identities=17% Similarity=0.119 Sum_probs=82.1
Q ss_pred HHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEE------eCCC------CCcCcCCCchHHHHHhc-
Q 019602 52 AEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLL------AMPE------NGIGLFPDVGFSYIAAK- 118 (338)
Q Consensus 52 ~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f------~~pe------~~lGl~P~~g~~~~l~r- 118 (338)
.+++.+.++...+||||+.++|.|.+||..++++||.++|++.+.+ +.+. .++|+.|+...+..+..
T Consensus 366 ~i~~~i~~~~~~gKPVva~~~g~aaSggY~iA~aaD~I~a~p~t~~GSIGv~~~~~~~~~~l~klGi~~~~~~t~~~~~~ 445 (584)
T TIGR00705 366 IIRRELARAQARGKPVIVSMGAMAASGGYWIASAADYIVASPNTITGSIGVFSVLPTFENSLDRIGVHVDGVSTHELANV 445 (584)
T ss_pred HHHHHHHHHHhCCCcEEEEECCccccHHHHHHHhCCEEEECCCCeeecCEEEEEccCHHHHHHhcCCceEEEeccCcCCC
Confidence 3445566677888999999999999999999999999999999987 5553 58999988766654443
Q ss_pred ---------------------------CCCChHH-----HHHHhhcCCCCCcHHHHHHcCccceecCCCC
Q 019602 119 ---------------------------GPGGGSV-----GAYLGMTGKRISTPSDALFAGLGTDYVPSGN 156 (338)
Q Consensus 119 ---------------------------l~G~~~~-----a~~llltg~~~~~a~eA~~~GLv~~vv~~~~ 156 (338)
.++.+ + ..+.+++|+.++ |++|+++||||++-.-++
T Consensus 446 s~~~~~t~~~~~~~~~~l~~~y~~F~~~Va~~-R~l~~e~v~~ia~Grv~t-g~eA~~~GLVD~ig~~~~ 513 (584)
T TIGR00705 446 SLLRPLTAEDQAIMQLSVEAGYRRFLSVVSAG-RNLTPTQVDKVAQGRVWT-GEDAVSNGLVDALGGLDE 513 (584)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhh-CCCCHHHHHHHHhCCCcC-HHHHHHcCCcccCCCHHH
Confidence 33333 3 678889999999 999999999999954333
No 99
>cd07021 Clp_protease_NfeD_like Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease. Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentiall
Probab=98.89 E-value=7.7e-09 Score=91.15 Aligned_cols=100 Identities=16% Similarity=0.119 Sum_probs=71.2
Q ss_pred HHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeCCCCCcCcCCCch-----HHH------HHhcCCC
Q 019602 53 EYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVG-----FSY------IAAKGPG 121 (338)
Q Consensus 53 ~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~pe~~lGl~P~~g-----~~~------~l~rl~G 121 (338)
...+...|..+|+|||+.|+|.|.++|+.|+++||++++++++.|+.+++-.+- +... ... -+.+.-|
T Consensus 47 ~~~I~~~l~~~~~pvva~V~g~AaSaG~~ia~a~d~i~m~p~a~iG~~~~v~~~-~~~~~~~K~~~~~~~~~~~~A~~~g 125 (178)
T cd07021 47 ALEIVDLILNSPIPTIAYVNDRAASAGALIALAADEIYMAPGATIGAAEPIPGD-GNGAADEKVQSYWRAKMRAAAEKKG 125 (178)
T ss_pred HHHHHHHHHhCCCCEEEEECCchHHHHHHHHHhCCeEEECCCCeEecCeeEcCC-CccchhHHHHHHHHHHHHHHHHHhC
Confidence 345677889999999999999999999999999999999999999998554321 1100 001 1222334
Q ss_pred ChH-HHHHHhhcC-------------CCCCcHHHHHHcCccceecCC
Q 019602 122 GGS-VGAYLGMTG-------------KRISTPSDALFAGLGTDYVPS 154 (338)
Q Consensus 122 ~~~-~a~~llltg-------------~~~~~a~eA~~~GLv~~vv~~ 154 (338)
++. .+..|+--. -.++ ++||++.|+++.++++
T Consensus 126 r~~~~a~~mv~~~~~v~~~~~~~~~~l~lt-a~eA~~~g~~d~ia~~ 171 (178)
T cd07021 126 RDPDIAEAMVDKDIEVPGVGIKGGELLTLT-ADEALKVGYAEGIAGS 171 (178)
T ss_pred CCHHHHHHHhhhhcccccccccccceeeeC-HHHHHHhCCeEEEECC
Confidence 331 333443333 2699 9999999999999774
No 100
>cd07022 S49_Sppa_36K_type Signal peptide peptidase A (SppA) 36K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 36K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily are all bacterial and include sohB peptidase and protein C. These are sometimes referred to as 36K type since they contain only one domain, unlike E. coli SppA that also contains an amino-terminal domain. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases.
Probab=98.86 E-value=2.7e-09 Score=96.70 Aligned_cols=43 Identities=16% Similarity=0.180 Sum_probs=37.1
Q ss_pred HHHhhC--CCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeCC
Q 019602 58 CKISEY--KKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMP 100 (338)
Q Consensus 58 ~~i~~~--pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~p 100 (338)
..+..+ +|||||+++|.|.|||+.|+++||+++|++.+.|+..
T Consensus 65 ~~l~~~~~~KpViA~v~g~a~s~gy~lA~~aD~i~a~~~a~~g~i 109 (214)
T cd07022 65 DAIRAARAGKPIVAFVNGLAASAAYWIASAADRIVVTPTAGVGSI 109 (214)
T ss_pred HHHHHHhcCCCEEEEECCchhhHHHHHHhcCCEEEEcCCCeEEee
Confidence 344444 5999999999999999999999999999999998653
No 101
>cd07023 S49_Sppa_N_C Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. This subfamily contains members with either a single domain (sometimes referred to as 36K type), such as sohB peptidase, protein C and archaeal signal peptide peptidase, or an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad
Probab=98.76 E-value=1.2e-08 Score=91.96 Aligned_cols=70 Identities=19% Similarity=0.181 Sum_probs=52.6
Q ss_pred ccccccCCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeC
Q 019602 14 DSNISSFPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTE 93 (338)
Q Consensus 14 d~~~~s~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~ 93 (338)
|..+...--..+|.|+|+.... ..++.+..+..++|||||+++|.|.|+|+.|+++||.+++++
T Consensus 32 d~~i~~ivl~~~s~Gg~~~~~~----------------~i~~~i~~~~~~~kpvia~v~g~~~s~g~~lA~aaD~i~a~~ 95 (208)
T cd07023 32 DDSVKAVVLRINSPGGSVVASE----------------EIYREIRRLRKAKKPVVASMGDVAASGGYYIAAAADKIVANP 95 (208)
T ss_pred CCCCcEEEEEEECCCCCHHHHH----------------HHHHHHHHHHhcCCcEEEEECCcchhHHHHHHhhCCEEEECC
Confidence 4444332233468888875421 123456677888999999999999999999999999999999
Q ss_pred CeEEeC
Q 019602 94 KTLLAM 99 (338)
Q Consensus 94 ~a~f~~ 99 (338)
.+.|+.
T Consensus 96 ~s~~g~ 101 (208)
T cd07023 96 TTITGS 101 (208)
T ss_pred CCeEEe
Confidence 998864
No 102
>TIGR00706 SppA_dom signal peptide peptidase SppA, 36K type. The member of this family from Bacillus subtilis was shown to have properties consistent with a role in degrading signal peptides after cleavage from precursor proteins, although it was not demonstrated conclusively.
Probab=98.76 E-value=3.7e-08 Score=88.86 Aligned_cols=103 Identities=17% Similarity=0.018 Sum_probs=69.1
Q ss_pred HHHHHhhCC--CcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeCCCCC------------cCcCC-------------
Q 019602 56 LICKISEYK--KPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENG------------IGLFP------------- 108 (338)
Q Consensus 56 ~~~~i~~~p--kPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~pe~~------------lGl~P------------- 108 (338)
+...|..++ |||||+++|.|.|+|+.|+++||.+++++++.++..-+. +|+-+
T Consensus 51 l~~~i~~~~~~kpvia~v~g~a~s~g~~la~aaD~i~a~p~a~vg~iGv~~~~~~~~~~l~k~Gv~~~~~~~g~~K~~~~ 130 (207)
T TIGR00706 51 IYEKLKKLKAKKPVVASMGGVAASGGYYIAMAADEIVANPGTITGSIGVILQGANVEKLYEKLGIEFEVIKSGEYKDIGS 130 (207)
T ss_pred HHHHHHHhcCCCCEEEEECCccchHHHHHHhcCCEEEECCCCeEEeeeEEEecCCHHHHHHhCCceEEEEEcCCCcCCCC
Confidence 444556666 999999999999999999999999999999887653222 23321
Q ss_pred -----CchHHHHH---------------h--cCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHH
Q 019602 109 -----DVGFSYIA---------------A--KGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLK 161 (338)
Q Consensus 109 -----~~g~~~~l---------------~--rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~ 161 (338)
....-..+ . |-+... .. +-++.|+.++ +++|++.||||++...+++.+..
T Consensus 131 ~~~~~s~~~~e~~~~~l~~~~~~f~~~va~~R~~~~~-~~-~~~~~~~~~~-~~~A~~~gLvD~i~~~~~~~~~~ 202 (207)
T TIGR00706 131 PTRELTPEERDILQNLVNESYEQFVQVVAKGRNLPVE-DV-KKFADGRVFT-GRQALKLRLVDKLGTEDDALKWL 202 (207)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHH-HH-HHHhcCCccc-HHHHHHcCCCcccCCHHHHHHHH
Confidence 00000001 1 122221 22 2346788999 99999999999998766655443
No 103
>PRK12319 acetyl-CoA carboxylase subunit alpha; Provisional
Probab=98.26 E-value=2.2e-05 Score=73.00 Aligned_cols=92 Identities=23% Similarity=0.224 Sum_probs=67.1
Q ss_pred HHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeCCCCCcCcCCCchHHHHHhcCCCChHHHHHHh
Q 019602 51 TAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLG 130 (338)
Q Consensus 51 ~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~ll 130 (338)
..+.+++..+....+|+|+.|-|.|.|||......||++++.+++.|++ +.|+. ...++.+--.....+.+.+
T Consensus 123 ~~ia~~~~~~s~~~VP~IsVI~G~~~gGgA~a~~~~D~v~m~~~a~~~v------~~pe~-~a~il~~~~~~a~~aa~~~ 195 (256)
T PRK12319 123 EAIARNLMEMSDLKVPIIAIIIGEGGSGGALALAVADQVWMLENTMYAV------LSPEG-FASILWKDGSRATEAAELM 195 (256)
T ss_pred HHHHHHHHHHhCCCCCEEEEEeCCcCcHHHHHhhcCCEEEEecCceEEE------cCHHH-HHHHHhcCcccHHHHHHHc
Confidence 4445567777889999999999999999888888999999999887764 23444 4444443222111223332
Q ss_pred hcCCCCCcHHHHHHcCccceecCC
Q 019602 131 MTGKRISTPSDALFAGLGTDYVPS 154 (338)
Q Consensus 131 ltg~~~~~a~eA~~~GLv~~vv~~ 154 (338)
+++ +.++.+.|+||+|+++
T Consensus 196 ----~~~-a~~l~~~g~iD~ii~e 214 (256)
T PRK12319 196 ----KIT-AGELLEMGVVDKVIPE 214 (256)
T ss_pred ----CCC-HHHHHHCCCCcEecCC
Confidence 779 9999999999999985
No 104
>cd07015 Clp_protease_NfeD Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease. Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentially cle
Probab=98.20 E-value=8.5e-06 Score=71.39 Aligned_cols=99 Identities=15% Similarity=0.157 Sum_probs=73.7
Q ss_pred HHHHHHhhCCCcEEEEec---CccchhhhHhhhcCCeEEEeCCeEEeCCCCCcCcCC-------CchH-HHH------Hh
Q 019602 55 SLICKISEYKKPYISLMD---GVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFP-------DVGF-SYI------AA 117 (338)
Q Consensus 55 ~~~~~i~~~pkPvIaavn---G~a~GgG~~Lal~cD~rias~~a~f~~pe~~lGl~P-------~~g~-~~~------l~ 117 (338)
.+...|...++||++.|+ |.|..+|..++++||.+++.+.++++.-.+..|..+ +... ... +.
T Consensus 49 ~I~~~i~~~~~pvv~~v~p~g~~AaSag~~I~~a~~~i~m~p~s~iG~~~pi~~~g~~~~~~~~~~ki~~~~~~~~r~~A 128 (172)
T cd07015 49 NIVQRIQQSKIPVIIYVYPPGASAASAGTYIALGSHLIAMAPGTSIGACRPILGYSQNGSIIEAPPKITNYFIAYIKSLA 128 (172)
T ss_pred HHHHHHHhcCcCEEEEEecCCCeehhHHHHHHHhcCceEECCCCEEEEccccccCCCCCccccchHHHHHHHHHHHHHHH
Confidence 456667788999999999 999999999999999999999999999887544322 1000 111 11
Q ss_pred cCCCCh-HHHHHHhhcCCCCCcHHHHHHcCccceecCC
Q 019602 118 KGPGGG-SVGAYLGMTGKRISTPSDALFAGLGTDYVPS 154 (338)
Q Consensus 118 rl~G~~-~~a~~llltg~~~~~a~eA~~~GLv~~vv~~ 154 (338)
+.-|.+ ..+..++--...++ ++||+++|++|.++++
T Consensus 129 ~~~Gr~~~~a~~~v~~~~~lt-a~EA~~~G~iD~ia~~ 165 (172)
T cd07015 129 QESGRNATIAEEFITKDLSLT-PEEALKYGVIEVVARD 165 (172)
T ss_pred HHHCcCHHHHHHHHHhhcCcC-HHHHHHcCCceeeeCC
Confidence 222321 25666667778899 9999999999999875
No 105
>CHL00198 accA acetyl-CoA carboxylase carboxyltransferase alpha subunit; Provisional
Probab=98.18 E-value=3e-05 Score=73.95 Aligned_cols=92 Identities=16% Similarity=0.144 Sum_probs=68.2
Q ss_pred HHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeCCCCCcCcCCCchHHHHHhcCCCChHHHHHHh
Q 019602 51 TAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLG 130 (338)
Q Consensus 51 ~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~ll 130 (338)
..+.+.+..+....+|+|++|-|.|.|||.-....||++++.++++|+. +.|.+. ..+|.+--. ++.+ +
T Consensus 179 ~aiar~l~~~a~~~VP~IsVViGeggsGGAlal~~aD~V~m~e~a~~sV------isPEg~-a~Il~~d~~---~a~~-a 247 (322)
T CHL00198 179 EAIAVNLREMFSFEVPIICTIIGEGGSGGALGIGIGDSIMMLEYAVYTV------ATPEAC-AAILWKDSK---KSLD-A 247 (322)
T ss_pred HHHHHHHHHHHcCCCCEEEEEeCcccHHHHHhhhcCCeEEEeCCeEEEe------cCHHHH-HHHHhcchh---hHHH-H
Confidence 3444566677889999999999999888876666699999999988765 335544 445544322 3333 3
Q ss_pred hcCCCCCcHHHHHHcCccceecCC
Q 019602 131 MTGKRISTPSDALFAGLGTDYVPS 154 (338)
Q Consensus 131 ltg~~~~~a~eA~~~GLv~~vv~~ 154 (338)
....+++ |.++++.|+||+|+|.
T Consensus 248 A~~~~it-a~dL~~~giiD~ii~E 270 (322)
T CHL00198 248 AEALKIT-SEDLKVLGIIDEIIPE 270 (322)
T ss_pred HHHcCCC-HHHHHhCCCCeEeccC
Confidence 4556899 9999999999999984
No 106
>cd07013 S14_ClpP Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease. Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. Additionally, they are implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of proteas
Probab=98.16 E-value=8.7e-06 Score=70.66 Aligned_cols=96 Identities=16% Similarity=0.136 Sum_probs=65.0
Q ss_pred HHHHHHhhCCCcEEEEecCccchhhhHhhhcCC--eEEEeCCeEEeCCCCCcCcCCCchHHH---------------HHh
Q 019602 55 SLICKISEYKKPYISLMDGVTMGFGIGISGHGR--YRIVTEKTLLAMPENGIGLFPDVGFSY---------------IAA 117 (338)
Q Consensus 55 ~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD--~rias~~a~f~~pe~~lGl~P~~g~~~---------------~l~ 117 (338)
.+...|..+++||++.+.|.|.++|..|+++|| .|++.++++|.+....-|......-.. .+.
T Consensus 49 ~i~~~i~~~~~~v~~~~~g~aaS~~~~i~~a~~~g~r~~~p~a~~~ih~~~~~~~g~~~d~~~~~~~l~~~~~~~~~~~a 128 (162)
T cd07013 49 AIYDTIKFIKADVVTIIDGLAASMGSVIAMAGAKGKRFILPNAMMMIHQPWGGTLGDATDMRIYADLLLKVEGNLVSAYA 128 (162)
T ss_pred HHHHHHHhcCCCceEEEEeehhhHHHHHHHcCCCCcEEEecCEEEEEccCcccccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 466677888999999999999999999999999 699989998877544322211100000 111
Q ss_pred cCCCCh-HHHHHHhhcCCCCCcHHHHHHcCcccee
Q 019602 118 KGPGGG-SVGAYLGMTGKRISTPSDALFAGLGTDY 151 (338)
Q Consensus 118 rl~G~~-~~a~~llltg~~~~~a~eA~~~GLv~~v 151 (338)
+..|.. .....++-.+..++ |+||+++||||++
T Consensus 129 ~~tg~~~~~i~~~~~~~~~~s-a~eA~~~GliD~i 162 (162)
T cd07013 129 HKTGQSEEELHADLERDTWLS-AREAVEYGFADTI 162 (162)
T ss_pred HHhCcCHHHHHHHHcCCcccc-HHHHHHcCCCCcC
Confidence 122311 13444544555668 9999999999975
No 107
>cd07018 S49_SppA_67K_type Signal peptide peptidase A (SppA) 67K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 67K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily contain an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown that members in this subfamily, mostly bacterial, are serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys
Probab=98.14 E-value=7.1e-06 Score=74.80 Aligned_cols=48 Identities=10% Similarity=0.040 Sum_probs=41.6
Q ss_pred HHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeCCC
Q 019602 53 EYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPE 101 (338)
Q Consensus 53 ~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~pe 101 (338)
+++.+..+...+|||||.++| |.+||..|+++||.+++++.+.|+..-
T Consensus 67 l~~~i~~~~~~~kpVia~~~~-~~sggy~lasaad~I~a~p~~~vg~iG 114 (222)
T cd07018 67 LRQALERFRASGKPVIAYADG-YSQGQYYLASAADEIYLNPSGSVELTG 114 (222)
T ss_pred HHHHHHHHHHhCCeEEEEeCC-CCchhhhhhhhCCEEEECCCceEEeec
Confidence 345666677789999999998 889999999999999999999998853
No 108
>PLN03230 acetyl-coenzyme A carboxylase carboxyl transferase; Provisional
Probab=98.14 E-value=4.9e-05 Score=74.39 Aligned_cols=92 Identities=17% Similarity=0.166 Sum_probs=65.4
Q ss_pred HHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeCCCCCcCcCCCchHHHHHhcCCCChHHHHHHh
Q 019602 51 TAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLG 130 (338)
Q Consensus 51 ~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~ll 130 (338)
..+.+++..+....+|+|+.|-|.+.+||.....+||+++|.++++|++ +.|.+. ..+|.+--. .+.+.
T Consensus 246 ~aIAr~l~ams~l~VPiISVViGeGgSGGAlalg~aD~VlMle~A~ysV------isPEga-AsILwkd~~---~A~eA- 314 (431)
T PLN03230 246 EAIAFNLREMFGLRVPIIATVIGEGGSGGALAIGCGNRMLMMENAVYYV------ASPEAC-AAILWKSAA---AAPKA- 314 (431)
T ss_pred HHHHHHHHHHhcCCCCEEEEEeCCCCcHHHHHhhcCCEEEEecCCEEEe------cCHHHH-HHHHhcccc---chHHH-
Confidence 4455677788899999999999999777765556789999999886554 234444 444443222 22222
Q ss_pred hcCCCCCcHHHHHHcCccceecCC
Q 019602 131 MTGKRISTPSDALFAGLGTDYVPS 154 (338)
Q Consensus 131 ltg~~~~~a~eA~~~GLv~~vv~~ 154 (338)
...-+++ +.++++.|+||+|+|.
T Consensus 315 Aealkit-A~dL~~~GiID~II~E 337 (431)
T PLN03230 315 AEALRIT-AAELVKLGVVDEIVPE 337 (431)
T ss_pred HHHcCCC-HHHHHhCCCCeEeccC
Confidence 2344899 9999999999999984
No 109
>PRK00277 clpP ATP-dependent Clp protease proteolytic subunit; Reviewed
Probab=98.11 E-value=9e-06 Score=73.00 Aligned_cols=100 Identities=13% Similarity=0.030 Sum_probs=65.1
Q ss_pred HHHHHHHhhCCCcEEEEecCccchhhhHhhhcCC--eEEEeCCeEEeCCCCCcCcCCCchH---------------HHHH
Q 019602 54 YSLICKISEYKKPYISLMDGVTMGFGIGISGHGR--YRIVTEKTLLAMPENGIGLFPDVGF---------------SYIA 116 (338)
Q Consensus 54 ~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD--~rias~~a~f~~pe~~lGl~P~~g~---------------~~~l 116 (338)
..++..|...+.||++.+.|.|.+.|..|+++++ .|++.++++|++-...-|......- ...+
T Consensus 79 ~~I~d~i~~~~~~v~t~~~G~aaS~a~~I~~ag~~~~r~~~p~s~imih~p~~~~~G~a~di~~~a~~l~~~~~~~~~~~ 158 (200)
T PRK00277 79 LAIYDTMQFIKPDVSTICIGQAASMGAFLLAAGAKGKRFALPNSRIMIHQPLGGFQGQATDIEIHAREILKLKKRLNEIL 158 (200)
T ss_pred HHHHHHHHhcCCCEEEEEEeEeccHHHHHHhcCCCCCEEEcCCceEEeccCcccccCChhHHHHHHHHHHHHHHHHHHHH
Confidence 3466677888899999999999999999998753 5777777766665443222110000 0112
Q ss_pred hcCCCCh-HHHHHHhhcCCCCCcHHHHHHcCccceecCC
Q 019602 117 AKGPGGG-SVGAYLGMTGKRISTPSDALFAGLGTDYVPS 154 (338)
Q Consensus 117 ~rl~G~~-~~a~~llltg~~~~~a~eA~~~GLv~~vv~~ 154 (338)
.+..|.. .....++-.+..++ |+||+++||||+|+..
T Consensus 159 a~~tg~~~~~i~~~~~~~~~ls-a~EA~e~GliD~Ii~~ 196 (200)
T PRK00277 159 AEHTGQPLEKIEKDTDRDNFMS-AEEAKEYGLIDEVLTK 196 (200)
T ss_pred HHHHCcCHHHHHHHhhCCcccc-HHHHHHcCCccEEeec
Confidence 2222321 14444444566788 9999999999999875
No 110
>TIGR00513 accA acetyl-CoA carboxylase, carboxyl transferase, alpha subunit. The enzyme acetyl-CoA carboxylase contains a biotin carboxyl carrier protein or domain, a biotin carboxylase, and a carboxyl transferase. This model represents the alpha chain of the carboxyl transferase for cases in which the architecture of the protein is as in E. coli, in which the carboxyltransferase portion consists of two non-identical subnits, alpha and beta.
Probab=98.10 E-value=4.7e-05 Score=72.57 Aligned_cols=92 Identities=17% Similarity=0.115 Sum_probs=65.5
Q ss_pred HHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeCCCCCcCcCCCchHHHHHhcCCCChHHHHHHh
Q 019602 51 TAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLG 130 (338)
Q Consensus 51 ~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~ll 130 (338)
+.+.+++..+....+|+|++|-|.|.|||.-....||++++.++++|+. .++-|+..++.+-.. ++....
T Consensus 176 ~aia~~l~a~s~~~VP~IsVViGeggsGGAla~~~aD~v~m~~~a~~sV-------isPEg~a~Il~kd~~---~a~~aa 245 (316)
T TIGR00513 176 EAIARNLREMARLGVPVICTVIGEGGSGGALAIGVGDKVNMLEYSTYSV-------ISPEGCAAILWKDAS---KAPKAA 245 (316)
T ss_pred HHHHHHHHHHHcCCCCEEEEEecccccHHHhhhccCCEEEEecCceEEe-------cCHHHHHHHhccchh---hHHHHH
Confidence 4455667778899999999999999888775555699999998887654 444344445544221 222222
Q ss_pred hcCCCCCcHHHHHHcCccceecCC
Q 019602 131 MTGKRISTPSDALFAGLGTDYVPS 154 (338)
Q Consensus 131 ltg~~~~~a~eA~~~GLv~~vv~~ 154 (338)
...+++ +.++++.|+||.|+|.
T Consensus 246 -e~~~~t-a~~l~~~G~iD~II~e 267 (316)
T TIGR00513 246 -EAMKIT-APDLKELGLIDSIIPE 267 (316)
T ss_pred -HHccCC-HHHHHHCCCCeEeccC
Confidence 236778 9999999999999984
No 111
>KOG1683 consensus Hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase [Lipid transport and metabolism]
Probab=98.06 E-value=5.3e-06 Score=79.55 Aligned_cols=136 Identities=16% Similarity=0.088 Sum_probs=109.1
Q ss_pred cccccccCCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhh--hHhhhcCCeEE
Q 019602 13 FDSNISSFPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFG--IGISGHGRYRI 90 (338)
Q Consensus 13 ~d~~~~s~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG--~~Lal~cD~ri 90 (338)
+.+|.||.+-+.|++|.|..+..- +...-....+-....++....+++.|+.+++||++-.|| +.++.+|+|||
T Consensus 101 ~gsntSs~~~~~isa~ld~~e~vv----g~h~fspa~~m~LlEii~~~~tS~~~iA~Ain~~~~~gk~~vvVg~c~gf~v 176 (380)
T KOG1683|consen 101 RGSNTSSLDINVISAGLDRPEMVV----GMHFFSPAHWMQLLEIILALYTSKLTIATAINGGSPAGKLPVVVGNCCGFRV 176 (380)
T ss_pred eeeccccCChHHHhhccCchhhhc----cccccCHHHHHHHHHHHHhcCCCchHHHHHHhcccccCCccEEeccCCceEE
Confidence 467778888899999999988762 222222334455667899999999999999999999999 88999999999
Q ss_pred Ee--CCeEEeCCCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCC
Q 019602 91 VT--EKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPS 154 (338)
Q Consensus 91 as--~~a~f~~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~ 154 (338)
.- +.-..+..+...++.-+..-...+...+|.+ .+-.-+--+.-++ -.||++-|+++++.|.
T Consensus 177 ~r~l~~y~~~~~~~l~e~g~~p~~iD~~~t~fGf~-~g~~~L~d~~gfd-v~eal~~gl~~~~~~r 240 (380)
T KOG1683|consen 177 NRLLPPYTIGLNELLLEIGADPWLIDSLITKFGFR-VGERALADGVGFD-VAEALAVGLGDEIGPR 240 (380)
T ss_pred EecccHHHHHHHHHHHHcCCCHHHHHHHHHhcCcc-ccHHHHhhccCcc-HHHHHhhccchhccch
Confidence 98 4555588999999654444455666667887 8888888899999 9999999999999985
No 112
>PRK05724 acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated
Probab=98.04 E-value=7.3e-05 Score=71.38 Aligned_cols=92 Identities=17% Similarity=0.149 Sum_probs=67.9
Q ss_pred HHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeCCCCCcCcCCCchHHHHHhcCCCChHHHHHHh
Q 019602 51 TAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLG 130 (338)
Q Consensus 51 ~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~ll 130 (338)
..+.+++..+....+|+|+.|-|.|.|||.-....||++++.+++.|+ ++++-|+..++.+-.. .+.+..
T Consensus 176 ~aia~~l~~~a~~~VP~IsVIiGeg~sGGAla~~~aD~v~m~~~A~~s-------visPEg~a~Il~~~~~---~a~~aa 245 (319)
T PRK05724 176 EAIARNLREMARLKVPIICTVIGEGGSGGALAIGVGDRVLMLEYSTYS-------VISPEGCASILWKDAS---KAPEAA 245 (319)
T ss_pred HHHHHHHHHHhCCCCCEEEEEeCCccHHHHHHHhccCeeeeecCceEe-------ecCHHHHHHHHhcCch---hHHHHH
Confidence 445567778889999999999999988877655569999998887765 4544444555554322 333333
Q ss_pred hcCCCCCcHHHHHHcCccceecCC
Q 019602 131 MTGKRISTPSDALFAGLGTDYVPS 154 (338)
Q Consensus 131 ltg~~~~~a~eA~~~GLv~~vv~~ 154 (338)
- ..+++ +.++.+.|+||+|+|.
T Consensus 246 e-~~~it-a~~l~~~g~iD~II~E 267 (319)
T PRK05724 246 E-AMKIT-AQDLKELGIIDEIIPE 267 (319)
T ss_pred H-HcCCC-HHHHHHCCCceEeccC
Confidence 3 66789 9999999999999984
No 113
>PLN03229 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional
Probab=98.00 E-value=9.2e-05 Score=76.81 Aligned_cols=92 Identities=14% Similarity=0.096 Sum_probs=69.5
Q ss_pred HHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeCCCCCcCcCCCchHHHHHhcCCCChHHHHHHh
Q 019602 51 TAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLG 130 (338)
Q Consensus 51 ~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~ll 130 (338)
..+.+.+..+....+|+|++|-|.|.|||.-....||+++|.++++|+ +.++-|+..++.+-.. ++.+ +
T Consensus 267 ~aIArnl~amasl~VP~ISVViGeggSGGAlA~g~aD~VlMle~A~~s-------VisPEgaAsILwkd~~---~A~e-A 335 (762)
T PLN03229 267 EAIAHNLRTMFGLKVPIVSIVIGEGGSGGALAIGCANKLLMLENAVFY-------VASPEACAAILWKSAK---AAPK-A 335 (762)
T ss_pred HHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhcCCEEEEecCCeEE-------ecCHHHHHHHHhcCcc---cHHH-H
Confidence 445566777889999999999999998888877789999999887654 4544444555544332 3333 3
Q ss_pred hcCCCCCcHHHHHHcCccceecCC
Q 019602 131 MTGKRISTPSDALFAGLGTDYVPS 154 (338)
Q Consensus 131 ltg~~~~~a~eA~~~GLv~~vv~~ 154 (338)
....+++ |.+.+++|+||.|+|.
T Consensus 336 Ae~lkiT-a~dL~~lGiiD~IIpE 358 (762)
T PLN03229 336 AEKLRIT-AQELCRLQIADGIIPE 358 (762)
T ss_pred HHHcCCC-HHHHHhCCCCeeeccC
Confidence 5566899 9999999999999984
No 114
>PRK12553 ATP-dependent Clp protease proteolytic subunit; Reviewed
Probab=97.96 E-value=5.2e-05 Score=68.48 Aligned_cols=98 Identities=15% Similarity=0.110 Sum_probs=72.8
Q ss_pred HHHHHHHhhCCCcEEEEecCccchhhhHhhhcCC--eEEEeCCeEEeCCCCCc-CcCCCchH------------------
Q 019602 54 YSLICKISEYKKPYISLMDGVTMGFGIGISGHGR--YRIVTEKTLLAMPENGI-GLFPDVGF------------------ 112 (338)
Q Consensus 54 ~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD--~rias~~a~f~~pe~~l-Gl~P~~g~------------------ 112 (338)
..++..|..++.||++.+.|.|.+.|..|+++|| .|++.++++|.+-.... |.. .|-
T Consensus 83 ~~I~d~i~~~~~~v~t~~~G~aaSaa~lI~~ag~~~~R~~~p~s~imiH~p~~~~~~--~G~a~d~~~~~~~l~~~~~~~ 160 (207)
T PRK12553 83 DAIYDTIQFIRPDVQTVCTGQAASAGAVLLAAGTPGKRFALPNARILIHQPSLGGGI--RGQASDLEIQAREILRMRERL 160 (207)
T ss_pred HHHHHHHHhcCCCcEEEEEeehhhHHHHHHHcCCcCcEEECCCchhhhcCccccCCC--ccCHHHHHHHHHHHHHHHHHH
Confidence 3567788888999999999999999999999999 59999999999877653 211 111
Q ss_pred HHHHhcCCCCh-HHHHHHhhcCCCCCcHHHHHHcCccceecCC
Q 019602 113 SYIAAKGPGGG-SVGAYLGMTGKRISTPSDALFAGLGTDYVPS 154 (338)
Q Consensus 113 ~~~l~rl~G~~-~~a~~llltg~~~~~a~eA~~~GLv~~vv~~ 154 (338)
...+.+.-|.. ....+++-.+..++ |+||+++||||+|+++
T Consensus 161 ~~~ya~~tg~~~e~i~~~~~~~~~lt-a~EA~e~GliD~I~~~ 202 (207)
T PRK12553 161 ERILAEHTGQSVEKIRKDTDRDKWLT-AEEAKDYGLVDQIITS 202 (207)
T ss_pred HHHHHHHhCCCHHHHHHHHhcCcccc-HHHHHHcCCccEEcCc
Confidence 11233333332 14455555678899 9999999999999874
No 115
>PF00574 CLP_protease: Clp protease; InterPro: IPR001907 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to the MEROPS peptidase family S14 (ClpP endopeptidase family, clan SK). ClpP is an ATP-dependent protease that cleaves a number of proteins, such as casein and albumin []. It exists as a heterodimer of ATP-binding regulatory A and catalytic P subunits, both of which are required for effective levels of protease activity in the presence of ATP [], although the P subunit alone does possess some catalytic activity. This family of sequences represent the P subunit. Proteases highly similar to ClpP have been found to be encoded in the genome of bacteria, metazoa, some viruses and in the chloroplast of plants. A number of the proteins in this family are classified as non-peptidase homologues as they have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for catalytic activity. ; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2ZL3_L 2ZL0_F 2ZL2_M 2ZL4_C 1TG6_D 2F6I_D 3V5I_b 3V5E_M 3QWD_D 2DEO_A ....
Probab=97.95 E-value=1.4e-05 Score=70.43 Aligned_cols=99 Identities=16% Similarity=0.077 Sum_probs=68.7
Q ss_pred HHHHHHhhCCCcEEEEecCccchhhhHhhhcCCe--EEEeCCeEEeCCCCCcCcCCCchHHHH---------------Hh
Q 019602 55 SLICKISEYKKPYISLMDGVTMGFGIGISGHGRY--RIVTEKTLLAMPENGIGLFPDVGFSYI---------------AA 117 (338)
Q Consensus 55 ~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~--rias~~a~f~~pe~~lGl~P~~g~~~~---------------l~ 117 (338)
.+...|..++.||++.+.|.|...|..++++|+. |++.+.+.|.+-++..+.......... +.
T Consensus 65 ~i~~~i~~~~~~v~t~~~G~aaSaa~~i~~ag~~~~R~~~~~s~~m~H~p~~~~~g~~~~l~~~~~~l~~~~~~~~~~~~ 144 (182)
T PF00574_consen 65 AIYDAIRSSKAPVTTVVLGLAASAATLIFLAGDKGKRYASPNSRFMIHQPSTGSGGNASELREQAKELEKLNERIANIYA 144 (182)
T ss_dssp HHHHHHHHSSSEEEEEEEEEEETHHHHHHHTSSTTTEEE-TT-EEEES-CEEEEEEEHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCeEEEEeCccccceehhhhcCCcCceeeeecCEEEeecceeecccccchhHHHHHHHHHHHHHHHHHHH
Confidence 5677889999999999999999999999999999 999999999998887665431111111 11
Q ss_pred cCCCCh-HHHHHHhhcCCCCCcHHHHHHcCccceecCC
Q 019602 118 KGPGGG-SVGAYLGMTGKRISTPSDALFAGLGTDYVPS 154 (338)
Q Consensus 118 rl~G~~-~~a~~llltg~~~~~a~eA~~~GLv~~vv~~ 154 (338)
...|.. ....+++-...-++ |+||+++||||+|+..
T Consensus 145 ~~tg~~~~~i~~~~~~~~~l~-a~EA~~~GiiD~I~~~ 181 (182)
T PF00574_consen 145 ERTGLSKEEIEELMDRDTWLS-AEEALEYGIIDEIIES 181 (182)
T ss_dssp HHHTS-HHHHHHHCSSTEEEE-HHHHHHHTSSSEEESS
T ss_pred HHhCCcHHHHHHHHhCCcccc-HHHHHHcCCCCEeccC
Confidence 111211 13334433445577 9999999999999763
No 116
>PRK14512 ATP-dependent Clp protease proteolytic subunit; Provisional
Probab=97.88 E-value=9.7e-05 Score=66.18 Aligned_cols=100 Identities=15% Similarity=0.005 Sum_probs=69.1
Q ss_pred HHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCe--EEEeCCeEEeCCCCCcCcCCCchHH---------------HHH
Q 019602 54 YSLICKISEYKKPYISLMDGVTMGFGIGISGHGRY--RIVTEKTLLAMPENGIGLFPDVGFS---------------YIA 116 (338)
Q Consensus 54 ~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~--rias~~a~f~~pe~~lGl~P~~g~~---------------~~l 116 (338)
..+...|...+.||++.+.|.|...|..|+++||- |++.++++|.+-...-|+.....-. ..+
T Consensus 71 ~aI~d~i~~~~~~V~t~v~G~AaSaaslIl~ag~~~~R~~~p~s~imiHqP~~~~~G~a~di~~~a~~l~~~~~~i~~~~ 150 (197)
T PRK14512 71 FAIFNMIRFVKPKVFTIGVGLVASAAALIFLAAKKESRFSLPNARYLLHQPLSGFKGVATDIEIYANELNKVKSELNDII 150 (197)
T ss_pred HHHHHHHHhCCCCEEEEEEeeeHhHHHHHHhcCCcCceeECCCCcEEEEcCccccccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 35677788899999999999999999999999985 9999999987755543332111100 011
Q ss_pred hcCCCCh-HHHHHHhhcCCCCCcHHHHHHcCccceecCC
Q 019602 117 AKGPGGG-SVGAYLGMTGKRISTPSDALFAGLGTDYVPS 154 (338)
Q Consensus 117 ~rl~G~~-~~a~~llltg~~~~~a~eA~~~GLv~~vv~~ 154 (338)
.+.-|.. .....++-....++ |+||+++||+|+|++.
T Consensus 151 a~~tg~~~~~i~~~~~~d~~lt-a~EA~~yGliD~I~~~ 188 (197)
T PRK14512 151 AKETGQELDKVEKDTDRDFWLD-SSSAVKYGLVFEVVET 188 (197)
T ss_pred HHHhCcCHHHHHHhhhcCcccC-HHHHHHcCCccEeecC
Confidence 1122321 13344444456688 9999999999999975
No 117
>cd07017 S14_ClpP_2 Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease. Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of protease activ
Probab=97.71 E-value=0.00011 Score=64.16 Aligned_cols=96 Identities=16% Similarity=0.064 Sum_probs=69.8
Q ss_pred HHHHHHhhCCCcEEEEecCccchhhhHhhhcCC--eEEEeCCeEEeCCCCCcCcCCCchH---------------HHHHh
Q 019602 55 SLICKISEYKKPYISLMDGVTMGFGIGISGHGR--YRIVTEKTLLAMPENGIGLFPDVGF---------------SYIAA 117 (338)
Q Consensus 55 ~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD--~rias~~a~f~~pe~~lGl~P~~g~---------------~~~l~ 117 (338)
.+...|...+.||++.+.|.|.++|..+++++| .|++.++++|.+-+...+..-...- ...+.
T Consensus 58 ~i~~~l~~~~~~v~t~~~g~aaS~~~~i~~~g~~~~r~~~~~a~~~~h~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~ 137 (171)
T cd07017 58 AIYDTMQYIKPPVSTICLGLAASMGALLLAAGTKGKRYALPNSRIMIHQPLGGAGGQASDIEIQAKEILRLRRRLNEILA 137 (171)
T ss_pred HHHHHHHhcCCCEEEEEEeEehhHHHHHHHcCCCCCEEEccchHHHHcCCCccCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456667778999999999999999999999999 7999999999998876654432110 11111
Q ss_pred cCCCCh-HHHHHHhhcCCCCCcHHHHHHcCcccee
Q 019602 118 KGPGGG-SVGAYLGMTGKRISTPSDALFAGLGTDY 151 (338)
Q Consensus 118 rl~G~~-~~a~~llltg~~~~~a~eA~~~GLv~~v 151 (338)
+..|.. .....++-.+.-++ |+||+++||||+|
T Consensus 138 ~~tg~~~~~i~~~~~~~~~lt-a~EA~e~GiiD~V 171 (171)
T cd07017 138 KHTGQPLEKIEKDTDRDRYMS-AEEAKEYGLIDKI 171 (171)
T ss_pred HHhCCCHHHHHHHhhCCcccc-HHHHHHcCCCccC
Confidence 222322 14444555677788 9999999999975
No 118
>CHL00028 clpP ATP-dependent Clp protease proteolytic subunit
Probab=97.71 E-value=0.00018 Score=64.62 Aligned_cols=101 Identities=11% Similarity=0.022 Sum_probs=71.2
Q ss_pred HHHHHHHhhCCCcEEEEecCccchhhhHhhhcCC--eEEEeCCeEEeCCCCCcCcCCCchHH----------------HH
Q 019602 54 YSLICKISEYKKPYISLMDGVTMGFGIGISGHGR--YRIVTEKTLLAMPENGIGLFPDVGFS----------------YI 115 (338)
Q Consensus 54 ~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD--~rias~~a~f~~pe~~lGl~P~~g~~----------------~~ 115 (338)
..++..|...+.||...+.|.|.+.|..|++++| -|++.++++|.+-....|..-+...- ..
T Consensus 78 ~aIyd~m~~~~~~V~Tv~~G~AaS~aslIl~aG~kg~R~~~p~s~imiHqp~~~~~~G~a~di~~~a~~l~~~~~~~~~~ 157 (200)
T CHL00028 78 LAIYDTMQFVKPDVHTICLGLAASMASFILAGGEITKRLAFPHARVMIHQPASSFYEGQASEFVLEAEELLKLRETITRV 157 (200)
T ss_pred HHHHHHHHhcCCCEEEEEEEehHHHHHHHHhCCCCCCEEecCCCeEEEecCccCcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3467778899999999999999999999999999 69999999999887765532111111 11
Q ss_pred HhcCCCCh-HHHHHHhhcCCCCCcHHHHHHcCccceecCCC
Q 019602 116 AAKGPGGG-SVGAYLGMTGKRISTPSDALFAGLGTDYVPSG 155 (338)
Q Consensus 116 l~rl~G~~-~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~ 155 (338)
+.+..|.. ....+++-...-++ |+||+++||||+|+.+.
T Consensus 158 ya~~Tg~~~e~i~~~~~r~~~lt-a~EA~eyGliD~I~~~~ 197 (200)
T CHL00028 158 YAQRTGKPLWVISEDMERDVFMS-ATEAKAYGIVDLVAVNN 197 (200)
T ss_pred HHHHHCcCHHHHHHHhhcCccCC-HHHHHHcCCCcEEeecC
Confidence 11122211 13334444455678 99999999999998753
No 119
>TIGR03133 malonate_beta malonate decarboxylase, beta subunit. Members of this protein family are the beta subunit of malonate decarboxylase. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase.
Probab=97.63 E-value=0.00047 Score=64.65 Aligned_cols=84 Identities=15% Similarity=0.128 Sum_probs=59.9
Q ss_pred HHhhCCCcEEEEecCc--cchhhhHhhhcCCeEEEeCCeEEeCCCCCcCcCCCchHHHHHhcCCCCh-HHHHHHhhcCCC
Q 019602 59 KISEYKKPYISLMDGV--TMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGG-SVGAYLGMTGKR 135 (338)
Q Consensus 59 ~i~~~pkPvIaavnG~--a~GgG~~Lal~cD~rias~~a~f~~pe~~lGl~P~~g~~~~l~rl~G~~-~~a~~llltg~~ 135 (338)
+++.. +|+|+.+-|+ |+||+..++..||++|+++++++++.- ........|.. --..+-.+..+.
T Consensus 132 ~ls~~-vP~Isvv~Gp~gc~GG~a~~a~l~D~vim~~~a~i~~aG-----------P~VIe~~~G~e~~~~~d~~l~~~~ 199 (274)
T TIGR03133 132 DARAA-VPVIGVIGGRVGCFGGMGIAAGLCSYLIMTEEGRLGLSG-----------PEVIEQEAGVEEFDSRDRALVWRT 199 (274)
T ss_pred HHhCC-CCEEEEEeCCCCcchHHHHHHhcCCEEEEeCCcEEeccC-----------HHHHHHhcCCCccCHHHhcccccc
Confidence 34444 9999999999 899999999999999999988777622 11222222310 023444455566
Q ss_pred CCcHHHHHHcCccceecCCC
Q 019602 136 ISTPSDALFAGLGTDYVPSG 155 (338)
Q Consensus 136 ~~~a~eA~~~GLv~~vv~~~ 155 (338)
+. +...+..|++|.+++++
T Consensus 200 lG-G~~~~~sG~~D~~v~dd 218 (274)
T TIGR03133 200 TG-GKHRFLSGDADVLVEDD 218 (274)
T ss_pred cc-hHhHhhcccceEEeCCH
Confidence 77 77888899999999973
No 120
>TIGR00493 clpP ATP-dependent Clp protease, proteolytic subunit ClpP. This model for the proteolytic subunit ClpP has been rebuilt to a higher stringency. In every bacterial genome with the ClpXP machine, a ClpP protein will be found that scores with this model. In general, this ClpP member will be encoded adjacent to the clpX gene, as were all examples used in the seed alignment. A large fraction of genomes have one or more additional ClpP paralogs, sometimes encoded nearby and sometimes elsewhere. The stringency of the trusted cutoff used here excludes the more divergent ClpP paralogs from being called authentic ClpP by this model.
Probab=97.60 E-value=0.00043 Score=61.69 Aligned_cols=98 Identities=14% Similarity=0.054 Sum_probs=67.3
Q ss_pred HHHHHHhhCCCcEEEEecCccchhhhHhhhcCC--eEEEeCCeEEeCCCCCcCcC---CCchH-H-----------HHHh
Q 019602 55 SLICKISEYKKPYISLMDGVTMGFGIGISGHGR--YRIVTEKTLLAMPENGIGLF---PDVGF-S-----------YIAA 117 (338)
Q Consensus 55 ~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD--~rias~~a~f~~pe~~lGl~---P~~g~-~-----------~~l~ 117 (338)
.++..|..++.||...+.|.|...|..|++++| .|++.++++|.+-...-|.. -+..- . ..+.
T Consensus 75 ~I~d~l~~~~~~v~t~~~G~AaSaaslI~~aG~~~~r~~~p~s~imiH~p~~~~~G~a~d~~~~a~~l~~~~~~~~~~ya 154 (191)
T TIGR00493 75 AIYDTMQFIKPDVSTICIGQAASMGAFLLSAGAKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQANEILRLKGLLNDILA 154 (191)
T ss_pred HHHHHHHhcCCCEEEEEEEeeccHHHHHHhcCCCCcEEecCCceEEEecCcccccCCcchhHHHHHHHHHHHHHHHHHHH
Confidence 456667777888888889999999999998766 69999999999876654332 22110 0 1122
Q ss_pred cCCCCh-HHHHHHhhcCCCCCcHHHHHHcCccceecC
Q 019602 118 KGPGGG-SVGAYLGMTGKRISTPSDALFAGLGTDYVP 153 (338)
Q Consensus 118 rl~G~~-~~a~~llltg~~~~~a~eA~~~GLv~~vv~ 153 (338)
+..|.. ....+++-.+..++ |+||+++||+|+|+.
T Consensus 155 ~~tg~~~~~i~~~~~~~~~lt-a~EA~~~GliD~ii~ 190 (191)
T TIGR00493 155 NHTGQSLEQIEKDTERDFFMS-AEEAKEYGLIDSVLT 190 (191)
T ss_pred HHHCcCHHHHHHHhhCCccCc-HHHHHHcCCccEEec
Confidence 222321 14445555566788 999999999999975
No 121
>PRK14513 ATP-dependent Clp protease proteolytic subunit; Provisional
Probab=97.57 E-value=0.00054 Score=61.53 Aligned_cols=102 Identities=16% Similarity=0.148 Sum_probs=71.1
Q ss_pred HHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCe--EEEeCCeEEeCCCCCcCcC---CCch------------HHHHH
Q 019602 54 YSLICKISEYKKPYISLMDGVTMGFGIGISGHGRY--RIVTEKTLLAMPENGIGLF---PDVG------------FSYIA 116 (338)
Q Consensus 54 ~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~--rias~~a~f~~pe~~lGl~---P~~g------------~~~~l 116 (338)
..++..|...+-||...+.|.|.+.|..|++++|- |++.+++++.+-....|.. .+.- ....+
T Consensus 75 laIyd~m~~~~~~V~Ti~~G~AaS~As~il~aG~kgkR~~~pna~iMIHqp~~~~~G~a~di~~~a~el~~~~~~l~~iy 154 (201)
T PRK14513 75 LAIYDTMRYIKAPVSTICVGIAMSMGSVLLMAGDKGKRMALPNSRIMIHQGSAGFRGNTPDLEVQAKEVLFLRDTLVDIY 154 (201)
T ss_pred HHHHHHHHhcCCCEEEEEEeeehhhHHHHHhcCCCCcEEecCCeEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 35677888899999999999999999999999996 9999999999877765532 1110 00011
Q ss_pred hcCCCCh-HHHHHHhhcCCCCCcHHHHHHcCccceecCCCC
Q 019602 117 AKGPGGG-SVGAYLGMTGKRISTPSDALFAGLGTDYVPSGN 156 (338)
Q Consensus 117 ~rl~G~~-~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~ 156 (338)
.+..|.. ..-.+++--...++ |+||+++||||+|+++..
T Consensus 155 a~~Tg~~~~~I~~~~~rd~~ms-a~EA~eyGliD~I~~~~~ 194 (201)
T PRK14513 155 HRHTDLPHEKLLRDMERDYFMS-PEEAKAYGLIDSVIEPTR 194 (201)
T ss_pred HHHHCcCHHHHHHHhccCcccC-HHHHHHcCCCcEEeccCC
Confidence 1222321 12233333345577 999999999999997644
No 122
>PRK12551 ATP-dependent Clp protease proteolytic subunit; Reviewed
Probab=97.48 E-value=0.00059 Score=61.09 Aligned_cols=101 Identities=13% Similarity=0.005 Sum_probs=69.4
Q ss_pred HHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCe--EEEeCCeEEeCCCCCcCcCCCchHH---------------HHH
Q 019602 54 YSLICKISEYKKPYISLMDGVTMGFGIGISGHGRY--RIVTEKTLLAMPENGIGLFPDVGFS---------------YIA 116 (338)
Q Consensus 54 ~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~--rias~~a~f~~pe~~lGl~P~~g~~---------------~~l 116 (338)
..++..|..++.||...+.|.|.+.|..|++++|- |++.+++++.+-...-|..-...-. ..+
T Consensus 73 ~aIyd~m~~~~~~V~t~~~G~AaS~AslIl~aG~~~~R~~~p~a~iMIHqP~~~~~G~a~di~~~a~~l~~~~~~~~~~y 152 (196)
T PRK12551 73 LGIFDTMQHVKPDVHTVCVGLAASMGAFLLCAGAKGKRSSLQHSRIMIHQPLGGARGQASDIRIQADEILFLKERLNTEL 152 (196)
T ss_pred HHHHHHHHhcCCCEEEEEEEEehhHHHHHHhCCCCCceecCCCCEEEEecCCcccCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 35677788889999999999999999999999985 8999999998877653322111000 011
Q ss_pred hcCCCCh-HHHHHHhhcCCCCCcHHHHHHcCccceecCCC
Q 019602 117 AKGPGGG-SVGAYLGMTGKRISTPSDALFAGLGTDYVPSG 155 (338)
Q Consensus 117 ~rl~G~~-~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~ 155 (338)
.+..|.. ....+++--...++ |+||+++||||+|++..
T Consensus 153 a~~tG~~~~~i~~~~~rd~~ms-a~EA~eyGliD~I~~~~ 191 (196)
T PRK12551 153 SERTGQPLERIQEDTDRDFFMS-PSEAVEYGLIDLVIDKR 191 (196)
T ss_pred HHHHCcCHHHHHHHhhcCcCCC-HHHHHHcCCCcEEeccC
Confidence 1222321 12333333345577 99999999999999754
No 123
>PRK14514 ATP-dependent Clp protease proteolytic subunit; Provisional
Probab=97.31 E-value=0.0012 Score=60.12 Aligned_cols=100 Identities=9% Similarity=-0.032 Sum_probs=70.2
Q ss_pred HHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCe--EEEeCCeEEeCCCCCcCcCCCchHHH---------------HH
Q 019602 54 YSLICKISEYKKPYISLMDGVTMGFGIGISGHGRY--RIVTEKTLLAMPENGIGLFPDVGFSY---------------IA 116 (338)
Q Consensus 54 ~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~--rias~~a~f~~pe~~lGl~P~~g~~~---------------~l 116 (338)
..++..|...+.||...+-|.|...|..|++++|. |++.++++|.+-...-|......-.. .+
T Consensus 102 laIyd~m~~~~~~V~tv~~G~AAS~AslIl~aG~~gkR~~~pna~iMiHqP~~~~~G~a~di~i~a~el~~~~~~i~~iy 181 (221)
T PRK14514 102 LGIYDTMQFISSDVATICTGMAASMASVLLVAGTKGKRSALPHSRVMIHQPLGGAQGQASDIEITAREIQKLKKELYTII 181 (221)
T ss_pred HHHHHHHHhcCCCEEEEEEEEehhHHHHHHhcCCCCceeeCCCCEEEeccCCcccCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 34677788899999999999999999999999996 99999999988776544322211000 11
Q ss_pred hcCCCCh-HHHHHHhhcCCCCCcHHHHHHcCccceecCC
Q 019602 117 AKGPGGG-SVGAYLGMTGKRISTPSDALFAGLGTDYVPS 154 (338)
Q Consensus 117 ~rl~G~~-~~a~~llltg~~~~~a~eA~~~GLv~~vv~~ 154 (338)
.+..|.. ....+++--...++ |+||+++||||+|+..
T Consensus 182 a~~TG~~~e~I~~~~~rd~wmt-A~EA~eyGliD~Vi~~ 219 (221)
T PRK14514 182 ADHSGTPFDKVWADSDRDYWMT-AQEAKEYGMIDEVLIK 219 (221)
T ss_pred HHHHCcCHHHHHHHhhcCccCC-HHHHHHcCCccEEeec
Confidence 1222321 12333333455678 9999999999999864
No 124
>PRK07189 malonate decarboxylase subunit beta; Reviewed
Probab=97.17 E-value=0.00086 Score=63.65 Aligned_cols=85 Identities=16% Similarity=0.153 Sum_probs=55.9
Q ss_pred HHhhCCCcEEEEecCc--cchhhhHhhhcCCeEEEeCCeEEeCCCCCcCcCCCchHHHHHhcCCCC-hHHHHHHhhcCCC
Q 019602 59 KISEYKKPYISLMDGV--TMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGG-GSVGAYLGMTGKR 135 (338)
Q Consensus 59 ~i~~~pkPvIaavnG~--a~GgG~~Lal~cD~rias~~a~f~~pe~~lGl~P~~g~~~~l~rl~G~-~~~a~~llltg~~ 135 (338)
.++.. +|+|+++-|+ |+||+..++..||++|+++++++++.- ........|. ..-..+-.+..+.
T Consensus 141 ~ls~~-VP~I~vv~G~~gc~GG~a~~a~l~D~iIm~~~a~iglaG-----------P~VIe~~~G~e~~d~~d~~~vw~~ 208 (301)
T PRK07189 141 DLRAA-VPVIGLIGGRVGCFGGMGIAAALCSYLIVSEEGRLGLSG-----------PEVIEQEAGVEEFDSRDRALVWRT 208 (301)
T ss_pred HHhCC-CCEEEEEcCCCCCcHHHHHHHhcCCEEEEECCcEEeccC-----------HHHHHHhcCCcccCHHHhcccccc
Confidence 34444 9999999999 999999999999999999988777622 1112221221 0012233333334
Q ss_pred CCcHHHHHHcCccceecCCCC
Q 019602 136 ISTPSDALFAGLGTDYVPSGN 156 (338)
Q Consensus 136 ~~~a~eA~~~GLv~~vv~~~~ 156 (338)
+. +...+..|.+|.+++++.
T Consensus 209 lG-G~h~~~sG~~D~~v~dd~ 228 (301)
T PRK07189 209 TG-GKHRYLSGLADALVDDDV 228 (301)
T ss_pred cC-cceeeecccceEEeCCHH
Confidence 44 455666899999998654
No 125
>TIGR03134 malonate_gamma malonate decarboxylase, gamma subunit. Members of this protein family are the gamma subunit of malonate decarboxylase. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase, while the gamma subunit appears either to mediate subunit interaction or to act as a co-decarboxylase with the beta subunit. The beta and gamma subunits exhibit some local sequence similarity.
Probab=97.11 E-value=0.0033 Score=57.92 Aligned_cols=97 Identities=10% Similarity=-0.010 Sum_probs=62.1
Q ss_pred HHHHHHHHHHHh---hCCCcEEEEecCccchhhhHhh-hcCCeEEEeCCeEEeCCCCCcCcCCCchHHHHHhcCCCChHH
Q 019602 50 FTAEYSLICKIS---EYKKPYISLMDGVTMGFGIGIS-GHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSV 125 (338)
Q Consensus 50 ~~~~~~~~~~i~---~~pkPvIaavnG~a~GgG~~La-l~cD~rias~~a~f~~pe~~lGl~P~~g~~~~l~rl~G~~~~ 125 (338)
.+....++.++. ..+.|+|+.|-|.++|||+.-. +.+|.++|- |...++..++-++..++.+-.. .
T Consensus 90 ~~a~A~l~~a~a~a~~~~vP~IsvI~g~a~ggg~lamg~~ad~v~Al-------p~A~i~vm~~e~aa~I~~~~~~---~ 159 (238)
T TIGR03134 90 NQALAHLAKALALARLAGHPVIGLIYGKAISGAFLAHGLQADRIIAL-------PGAMVHVMDLESMARVTKRSVE---E 159 (238)
T ss_pred HHHHHHHHHHHHHhhcCCCCEEEEEeCCccHHHHHHHccCcCeEEEc-------CCcEEEecCHHHHHHHHccCHh---H
Confidence 344444555555 4559999999999998876433 236666665 5555666666666656555442 3
Q ss_pred HHHHhhcCC--CCCcHHHHHHcCccceecCCCCh
Q 019602 126 GAYLGMTGK--RISTPSDALFAGLGTDYVPSGNL 157 (338)
Q Consensus 126 a~~llltg~--~~~~a~eA~~~GLv~~vv~~~~l 157 (338)
..++.-+-. ..+ ...+.++|+||.|+++.+-
T Consensus 160 ~~e~a~~~~~~a~~-~~~~~~~G~vd~vi~~~~~ 192 (238)
T TIGR03134 160 LEALAKSSPVFAPG-IENFVKLGGVHALLDVADA 192 (238)
T ss_pred HHHHHHhhhhhccC-HHHHHhCCCccEEeCCCCc
Confidence 444433322 345 7789999999999986553
No 126
>PRK11778 putative inner membrane peptidase; Provisional
Probab=97.00 E-value=0.002 Score=62.01 Aligned_cols=101 Identities=13% Similarity=-0.017 Sum_probs=68.6
Q ss_pred HHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeCCCCCcCcCCCchHH-----------------------
Q 019602 57 ICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFS----------------------- 113 (338)
Q Consensus 57 ~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~pe~~lGl~P~~g~~----------------------- 113 (338)
+.+++...||||+.+++.|.=||.-|+++||-++|.+.+.++...+... .|.....
T Consensus 147 l~~lr~~~kpVva~v~~~AASggY~iAsaAD~I~A~P~a~vGSIGVi~~-~~~~~~lLeKlGI~~evi~aG~yK~a~~pf 225 (330)
T PRK11778 147 LQRLRDAGIPLTVAVDKVAASGGYMMACVADKIIAAPFAIVGSIGVVAQ-IPNFHRLLKKHDIDVELHTAGEYKRTLTLF 225 (330)
T ss_pred HHHHHhcCCCEEEEECCchhhHHHHHHHhCCEEEECCCCeEEeeeeeee-ccCHHHHHHHCCCceEEEEecCccCCCCCC
Confidence 4567788899999999999999999999999999999887765433211 1111100
Q ss_pred --------HHHhc-----------CC--CChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHH
Q 019602 114 --------YIAAK-----------GP--GGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGS 159 (338)
Q Consensus 114 --------~~l~r-----------l~--G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~ 159 (338)
..+.. .+ ++.....+-+.+|+.+. |++|++.||||++...+++..
T Consensus 226 ~~~see~Re~~q~~Ld~~y~~F~~~Va~~R~~l~~~~va~G~v~~-g~~Al~~GLVD~Ig~~dd~i~ 291 (330)
T PRK11778 226 GENTEEGREKFREELEETHQLFKDFVQRYRPQLDIDKVATGEHWY-GQQALELGLVDEIQTSDDYLL 291 (330)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHhCCCcC-HHHHHHCCCCCcCCCHHHHHH
Confidence 00000 00 11002234456899999 999999999999987666543
No 127
>PRK10949 protease 4; Provisional
Probab=96.99 E-value=0.003 Score=65.87 Aligned_cols=109 Identities=17% Similarity=0.080 Sum_probs=70.8
Q ss_pred HHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeCCCC------------CcCcCCCchHHH------
Q 019602 53 EYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPEN------------GIGLFPDVGFSY------ 114 (338)
Q Consensus 53 ~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~pe~------------~lGl~P~~g~~~------ 114 (338)
+++.+.+++...||||+.+.|.|.-||.-++++||.++|.+.+..+---+ ++|+-++...+-
T Consensus 385 i~~~i~~~r~~gKPVvas~~~~aASggY~iA~aad~I~a~p~t~tGSIGV~~~~~~~~~ll~klGV~~~~~~~~~~~~~~ 464 (618)
T PRK10949 385 IRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVASPSTLTGSIGIFGVINTVENSLDSIGVHTDGVSTSPLADVS 464 (618)
T ss_pred HHHHHHHHHhcCCcEEEEECCCCccHHHHHHHhcCEEEECCCCceeeCcEEEEccCHHHHHHhcCCceeEEeccccCCcc
Confidence 44455566777899999999999999999999999999999766544221 233322211000
Q ss_pred -----------------------HH-----hcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHH
Q 019602 115 -----------------------IA-----AKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEAL 164 (338)
Q Consensus 115 -----------------------~l-----~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l 164 (338)
++ .|-+... . .+-+..|+.++ +.+|++.||||++-.-++..+.+.++
T Consensus 465 ~~~~~s~e~~~~~q~~ld~~y~~F~~~Va~~R~~~~~-~-v~~ia~Grv~t-g~~A~~~GLVD~lG~~~~ai~~a~~~ 539 (618)
T PRK10949 465 ITKALPPEFQQMMQLSIENGYKRFITLVADSRHKTPE-Q-IDKIAQGHVWT-GQDAKANGLVDSLGDFDDAVAKAAEL 539 (618)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCHH-H-HHHHhcCCccc-HHHHHHcCCCccCCCHHHHHHHHHHH
Confidence 00 1111211 2 23356899999 99999999999996655544444443
No 128
>TIGR00515 accD acetyl-CoA carboxylase, carboxyl transferase, beta subunit. The enzyme acetyl-CoA carboxylase contains a biotin carboxyl carrier protein or domain, a biotin carboxylase, and a carboxyl transferase. This model represents the beta chain of the carboxyl transferase for cases in which the architecture of the protein is as in E. coli, in which the carboxyltransferase portion consists of two non-identical subnits, alpha and beta.
Probab=96.98 E-value=0.0036 Score=59.16 Aligned_cols=90 Identities=20% Similarity=0.187 Sum_probs=63.9
Q ss_pred HHHHHhhCCCcEEEEecCccchhhhH-hhhcCCeEEEeCCeEEeCCCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCC
Q 019602 56 LICKISEYKKPYISLMDGVTMGFGIG-ISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGK 134 (338)
Q Consensus 56 ~~~~i~~~pkPvIaavnG~a~GgG~~-Lal~cD~rias~~a~f~~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~ 134 (338)
.+.++.....|.|+++-|+|+||+.. .++.+|++||.+++.+++.-.+ .+...+|.. +. +
T Consensus 185 ~~~~~~~~~vP~IsVv~gpt~GG~aas~a~~~D~iia~p~A~ig~aGpr-----------Vie~ti~e~-------lp-e 245 (285)
T TIGR00515 185 ALAKMSERGLPYISVLTDPTTGGVSASFAMLGDLNIAEPKALIGFAGPR-----------VIEQTVREK-------LP-E 245 (285)
T ss_pred HHHHHHcCCCCEEEEEeCCcchHHHHHHHhCCCEEEEECCeEEEcCCHH-----------HHHHHhcCc-------cc-h
Confidence 34456667899999999999999654 5679999999999988874333 122223322 11 2
Q ss_pred CCCcHHHHHHcCccceecCCCChHHHHHHH
Q 019602 135 RISTPSDALFAGLGTDYVPSGNLGSLKEAL 164 (338)
Q Consensus 135 ~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l 164 (338)
.+.+++-+++.|+||.||++.++.....++
T Consensus 246 ~~q~ae~~~~~G~vD~iv~~~~~r~~l~~~ 275 (285)
T TIGR00515 246 GFQTSEFLLEHGAIDMIVHRPEMKKTLASL 275 (285)
T ss_pred hcCCHHHHHhCCCCcEEECcHHHHHHHHHH
Confidence 343377788999999999998887765543
No 129
>PRK05654 acetyl-CoA carboxylase subunit beta; Validated
Probab=96.89 E-value=0.0054 Score=58.23 Aligned_cols=90 Identities=20% Similarity=0.163 Sum_probs=62.1
Q ss_pred HHHHHhhCCCcEEEEecCccchhhhH-hhhcCCeEEEeCCeEEeCCCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCC
Q 019602 56 LICKISEYKKPYISLMDGVTMGFGIG-ISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGK 134 (338)
Q Consensus 56 ~~~~i~~~pkPvIaavnG~a~GgG~~-Lal~cD~rias~~a~f~~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~ 134 (338)
.+.++....+|.|+++-|+|+||+.. .++.+|++||.+.+.+++.-.+ .+...+|.. + . +
T Consensus 186 a~~~~~~a~vP~IsVv~gpt~GG~aas~a~~~D~iia~p~A~ig~aGpr-----------vie~~~~e~-----l--p-e 246 (292)
T PRK05654 186 ALKRLSEAGLPYISVLTDPTTGGVSASFAMLGDIIIAEPKALIGFAGPR-----------VIEQTVREK-----L--P-E 246 (292)
T ss_pred HHHHHHcCCCCEEEEEeCCCchHHHHHHHHcCCEEEEecCcEEEecCHH-----------HHHhhhhhh-----h--h-h
Confidence 34455667899999999999999654 5777999999998877773331 112222211 1 1 2
Q ss_pred CCCcHHHHHHcCccceecCCCChHHHHHHH
Q 019602 135 RISTPSDALFAGLGTDYVPSGNLGSLKEAL 164 (338)
Q Consensus 135 ~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l 164 (338)
.+.+++-+.+.|+||.|+++.++.....++
T Consensus 247 ~~~~ae~~~~~G~vD~Vv~~~e~r~~l~~~ 276 (292)
T PRK05654 247 GFQRAEFLLEHGAIDMIVHRRELRDTLASL 276 (292)
T ss_pred hhcCHHHHHhCCCCcEEECHHHHHHHHHHH
Confidence 243378888999999999998887765443
No 130
>PF01343 Peptidase_S49: Peptidase family S49 peptidase classification.; InterPro: IPR002142 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S49 (protease IV family, clan S-). The predicted active site serine for members of this family occurs in a transmembrane domain. The domain defines sequences in viruses, archaea, bacteria and plants. These sequences are variously annotated in the different taxonomic groups, examples are: Viruses: capsid protein Archaea: proteinase IV homolog Bacteria: proteinase IV, sohB, SppA, pfaP, putative protease Plants: SppA, protease IV This group also contains proteins classified as non-peptidase homologues that either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity of peptidases. Related proteins, non-peptidase homologs and unclassified S49 members are also to be found in IPR002810 from INTERPRO.; GO: 0008233 peptidase activity, 0006508 proteolysis; PDB: 3RST_B 3BEZ_D 3BF0_A.
Probab=96.84 E-value=0.0011 Score=56.97 Aligned_cols=102 Identities=12% Similarity=0.023 Sum_probs=62.0
Q ss_pred HhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeCCCCC------------cC---------cCCCch-----HH
Q 019602 60 ISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENG------------IG---------LFPDVG-----FS 113 (338)
Q Consensus 60 i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~pe~~------------lG---------l~P~~g-----~~ 113 (338)
+....|||||.++|.|.-+|.-|+.+||-+++++.+.++..-+. +| =....+ .+
T Consensus 2 ~~~~~KpV~a~~~~~~~S~~Y~lAs~ad~I~~~p~s~vgsiGv~~~~~~~~~~l~k~GV~~~~~~~g~~K~~~~~~~~~s 81 (154)
T PF01343_consen 2 FKASGKPVVAYAEGYAASGAYYLASAADEIYANPSSSVGSIGVSAERLFFKGLLEKLGVKVEVVRSGEYKSAGFPRDPMS 81 (154)
T ss_dssp HHHTT--EEEEEEEEEETHHHHHHTTSSEEEE-TT-EEE---EEEEEEE-HHHHHHTT-EEEEEESSTTCCCCCTTSS--
T ss_pred ccccCCeEEEEECCcchhHHHHHHHcCCEEEecCCCEEEEeChhhccccHHHHHHHCCCeEEEEecCccccccCcCCCCC
Confidence 45678999999999999899999999999999998887763322 11 111111 00
Q ss_pred ----HHHhcC-----------C----CChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHH
Q 019602 114 ----YIAAKG-----------P----GGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKE 162 (338)
Q Consensus 114 ----~~l~rl-----------~----G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~ 162 (338)
..+.++ + |......+-++.|..++ +++|++.||||++-..+++.....
T Consensus 82 ~~~r~~~~~~l~~~~~~f~~~Va~~R~~~~~~v~~~~~~~~~~-~~~A~~~GLiD~i~~~~~~~~~l~ 148 (154)
T PF01343_consen 82 EEERENLQELLDELYDQFVNDVAEGRGLSPDDVEEIADGGVFT-AQQALELGLIDEIGTFDEAIARLA 148 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTS-HHHHHCHHCCHEEE-HHHHHHTTSSSEETSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHhhcccc-HHHHHHcCchhhcCCHHHHHHHHH
Confidence 011110 0 11101223356889999 999999999999976666555443
No 131
>COG0825 AccA Acetyl-CoA carboxylase alpha subunit [Lipid metabolism]
Probab=96.78 E-value=0.0078 Score=56.32 Aligned_cols=90 Identities=19% Similarity=0.153 Sum_probs=68.2
Q ss_pred HHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeCCCCCcCcCCCchHHHHHhcCCCChHHHHHHhhc
Q 019602 53 EYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMT 132 (338)
Q Consensus 53 ~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~lllt 132 (338)
+.+....+..+++|+||.|=|-.-+||.-=...+|.+.+-++++|+. +.|.+.++ +|-+=. +++.+. ..
T Consensus 177 IA~nL~em~~LkvPiI~iVIGEGgSGGALAi~vad~V~mle~s~ySV------isPEG~As-ILWkD~---~ka~eA-Ae 245 (317)
T COG0825 177 IARNLREMARLKVPIISIVIGEGGSGGALAIGVADRVLMLENSTYSV------ISPEGCAS-ILWKDA---SKAKEA-AE 245 (317)
T ss_pred HHHHHHHHhCCCCCEEEEEecCCCchhhHHhhHHHHHHHHHhceeee------cChhhhhh-hhhcCh---hhhHHH-HH
Confidence 34456678899999999999988777776666789999999999885 45665555 444422 144443 45
Q ss_pred CCCCCcHHHHHHcCccceecCC
Q 019602 133 GKRISTPSDALFAGLGTDYVPS 154 (338)
Q Consensus 133 g~~~~~a~eA~~~GLv~~vv~~ 154 (338)
...++ |.+..++|+||.|+|.
T Consensus 246 ~mkit-a~dLk~lgiID~II~E 266 (317)
T COG0825 246 AMKIT-AHDLKELGIIDGIIPE 266 (317)
T ss_pred HcCCC-HHHHHhCCCcceeccC
Confidence 56899 9999999999999985
No 132
>CHL00174 accD acetyl-CoA carboxylase beta subunit; Reviewed
Probab=96.74 E-value=0.0089 Score=56.59 Aligned_cols=85 Identities=18% Similarity=0.131 Sum_probs=59.6
Q ss_pred hCCCcEEEEecCccchhhhHh-hhcCCeEEEeCCeEEeCCCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHH
Q 019602 62 EYKKPYISLMDGVTMGFGIGI-SGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPS 140 (338)
Q Consensus 62 ~~pkPvIaavnG~a~GgG~~L-al~cD~rias~~a~f~~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~ 140 (338)
.-..|.|+++.|+|.||+... ++.||++|+.+.+.+++.-.+ .....+|.. +. +-+.+++
T Consensus 205 ~~~vP~Isvl~gPt~GG~aas~a~l~Diiiae~~A~IgfAGPr-----------VIe~t~ge~-------lp-e~fq~ae 265 (296)
T CHL00174 205 NKKLFYISILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAGKR-----------VIEQTLNKT-------VP-EGSQAAE 265 (296)
T ss_pred cCCCCEEEEEcCCCchHHHHHHHHcccEEEEeCCeEEEeeCHH-----------HHHHhcCCc-------CC-cccccHH
Confidence 467999999999999998776 667999999888776653221 122222221 11 2244378
Q ss_pred HHHHcCccceecCCCChHHHHHHHH
Q 019602 141 DALFAGLGTDYVPSGNLGSLKEALL 165 (338)
Q Consensus 141 eA~~~GLv~~vv~~~~l~~~~~~l~ 165 (338)
-.++.|+||.+|+..++.+...++.
T Consensus 266 ~l~~~G~vD~iV~r~~lr~~l~~ll 290 (296)
T CHL00174 266 YLFDKGLFDLIVPRNLLKGVLSELF 290 (296)
T ss_pred HHHhCcCceEEEcHHHHHHHHHHHH
Confidence 8899999999999988887665443
No 133
>PRK12552 ATP-dependent Clp protease-like protein; Reviewed
Probab=96.46 E-value=0.015 Score=53.01 Aligned_cols=98 Identities=16% Similarity=0.114 Sum_probs=67.0
Q ss_pred HHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCe--EEEeCCeEEeCCCCCcCcCCCchHHHH----------------
Q 019602 54 YSLICKISEYKKPYISLMDGVTMGFGIGISGHGRY--RIVTEKTLLAMPENGIGLFPDVGFSYI---------------- 115 (338)
Q Consensus 54 ~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~--rias~~a~f~~pe~~lGl~P~~g~~~~---------------- 115 (338)
...+..|...+-||...+-|.|.+.|..|++++|- |++.++++|.+-...-|.. + -.+-+
T Consensus 97 laIyD~m~~ik~~V~Tv~~G~AaS~AslIl~aG~kg~R~alpns~iMIHqP~~~~~-G-~A~di~~~a~el~~~r~~l~~ 174 (222)
T PRK12552 97 FAICDTMRYIKPPVHTICIGQAMGTAAMILSAGTKGQRASLPHATIVLHQPRSGAR-G-QATDIQIRAKEVLHNKRTMLE 174 (222)
T ss_pred HHHHHHHHhcCCCeEEEEEeehhhHHHHHHhCCCCCceecCCCcEEEeccCCcccc-c-CHHHHHHHHHHHHHHHHHHHH
Confidence 34666778888999999999999999999999995 9999999999877765432 1 11111
Q ss_pred -HhcCCCCh-HHHHHHhhcCCCCCcHHHHHHcCccceecCC
Q 019602 116 -AAKGPGGG-SVGAYLGMTGKRISTPSDALFAGLGTDYVPS 154 (338)
Q Consensus 116 -l~rl~G~~-~~a~~llltg~~~~~a~eA~~~GLv~~vv~~ 154 (338)
+.+..|.. ..-.+++--...++ |+||+++||||+|+.+
T Consensus 175 iya~~TG~~~e~I~~d~~rd~wms-A~EA~eyGliD~Ii~~ 214 (222)
T PRK12552 175 ILSRNTGQTVEKLSKDTDRMFYLT-PQEAKEYGLIDRVLES 214 (222)
T ss_pred HHHHHHCCCHHHHHHHhcCCCcCC-HHHHHHcCCCcEEecc
Confidence 11111211 01111111224477 9999999999999865
No 134
>COG0740 ClpP Protease subunit of ATP-dependent Clp proteases [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=96.33 E-value=0.018 Score=51.41 Aligned_cols=100 Identities=14% Similarity=0.087 Sum_probs=67.8
Q ss_pred HHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeE--EEeCCeEEeCCCCCcCcCCCchHHH----------------H
Q 019602 54 YSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYR--IVTEKTLLAMPENGIGLFPDVGFSY----------------I 115 (338)
Q Consensus 54 ~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~r--ias~~a~f~~pe~~lGl~P~~g~~~----------------~ 115 (338)
...+..+...+.||...+-|.|.-.|..|++++|.. ++.+++++.+--.. |.+-+...=. .
T Consensus 75 ~AIydtm~~ik~~V~ti~~G~AaSmgs~l~~aG~~g~r~~lPnsrimIHqP~-gg~~G~a~Di~i~A~ei~~~~~~l~~i 153 (200)
T COG0740 75 LAIYDTMQFIKPPVSTICMGQAASMGSVLLMAGDKGKRFALPNARIMIHQPS-GGAQGQASDIEIHAREILKIKERLNRI 153 (200)
T ss_pred HHHHHHHHhcCCCeEEEEecHHHhHHHHHHhcCCCCCceeCCCceEEEecCC-ccCccCHHHHHHHHHHHHHHHHHHHHH
Confidence 346777888999999999999999999999999984 89888888776655 3332221110 1
Q ss_pred HhcCCCChHHHHHHhh--cCCCCCcHHHHHHcCccceecCCCC
Q 019602 116 AAKGPGGGSVGAYLGM--TGKRISTPSDALFAGLGTDYVPSGN 156 (338)
Q Consensus 116 l~rl~G~~~~a~~lll--tg~~~~~a~eA~~~GLv~~vv~~~~ 156 (338)
+...-|.. .-.-... -...++ |+||+++||+|+|+...+
T Consensus 154 ~a~~TGq~-~e~i~~d~drd~~ms-a~eA~~yGLiD~V~~~~~ 194 (200)
T COG0740 154 YAEHTGQT-LEKIEKDTDRDTWMS-AEEAKEYGLIDKVIESRE 194 (200)
T ss_pred HHHHcCCC-HHHHHHhhcccccCC-HHHHHHcCCcceeccccc
Confidence 11112322 2111111 234578 999999999999987654
No 135
>COG0616 SppA Periplasmic serine proteases (ClpP class) [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=96.13 E-value=0.025 Score=54.34 Aligned_cols=100 Identities=14% Similarity=0.033 Sum_probs=67.8
Q ss_pred HHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeCCCCCcCcCCCchHHHHHhc--------------
Q 019602 53 EYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAK-------------- 118 (338)
Q Consensus 53 ~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~pe~~lGl~P~~g~~~~l~r-------------- 118 (338)
+++.+.++..-. ||++.|++.|.=||.-++++||.+||++.+..|=--+..+ .|.. ...+.+
T Consensus 118 i~~~l~~l~~~~-PV~v~v~~~AASGGY~IA~aAd~I~a~p~si~GSIGVi~~-~~~~--~~l~~k~Gv~~~~~~ag~~k 193 (317)
T COG0616 118 IARALKRLRAKK-PVVVSVGGYAASGGYYIALAADKIVADPSSITGSIGVISG-APNF--EELLEKLGVEKEVITAGEYK 193 (317)
T ss_pred HHHHHHHHhhcC-CEEEEECCeecchhhhhhccCCEEEecCCceeeeceeEEe-cCCH--HHHHHhcCCceeeeeccccc
Confidence 334444544444 9999999999999999999999999998887765443333 1221 111111
Q ss_pred -----------------------------------CCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChH
Q 019602 119 -----------------------------------GPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLG 158 (338)
Q Consensus 119 -----------------------------------l~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~ 158 (338)
...+. ....-+.+|+.++ +.+|...||||++-..++..
T Consensus 194 ~~~~~~~~~t~e~~~~~q~~~~e~y~~F~~~V~~~R~~~~-~~~~~~a~g~v~~-g~~A~~~gLVDelg~~~~av 266 (317)
T COG0616 194 DILSPFRPLTEEEREILQKEIDETYDEFVDKVAEGRGLSD-EAVDKLATGRVWT-GQQALELGLVDELGGLDDAV 266 (317)
T ss_pred cccCcccCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCh-hHHHHHhccceec-HHHhhhcCCchhcCCHHHHH
Confidence 11121 2334567899999 99999999999997654433
No 136
>TIGR01117 mmdA methylmalonyl-CoA decarboxylase alpha subunit. This model describes methymalonyl-CoA decarboxylase aplha subunit in archaea and bacteria. Metylmalonyl-CoA decarboxylase Na+ pump is a representative of a class of Na+ transport decarboxylases that couples the energy derived by decarboxylation of carboxylic acid substrates to drive the extrusion of Na+ ion across the membrane.
Probab=95.97 E-value=0.041 Score=56.32 Aligned_cols=105 Identities=11% Similarity=0.056 Sum_probs=66.4
Q ss_pred HHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhc-----CCeEEEeCCeEEeCCCCCcCcCCCchHHHHHh-cCCC-
Q 019602 49 VFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGH-----GRYRIVTEKTLLAMPENGIGLFPDVGFSYIAA-KGPG- 121 (338)
Q Consensus 49 ~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~-----cD~rias~~a~f~~pe~~lGl~P~~g~~~~l~-rl~G- 121 (338)
..+...+++.++....+|+|+.|-|.+.|||. ++++ +|+++|.++++++ +.++-++...+. +.+.
T Consensus 373 ~~~~~a~~~~a~~~~~vP~isvi~g~~~Gga~-~am~~~~~~~d~~~a~p~a~~~-------v~~pe~a~~i~~~~~l~~ 444 (512)
T TIGR01117 373 IIRHGAKVLYAYSEATVPKVTIITRKAYGGAY-LAMCSKHLGADQVYAWPTAEIA-------VMGPAGAANIIFRKDIKE 444 (512)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEcCCCchHHH-HHhccccCCCCEEEEcCCCeEe-------ecCHHHHHHHHhhhhccc
Confidence 34455567888889999999999999988765 4554 8888887776554 443333333332 2111
Q ss_pred -C-hHHHHHHhh---cCCCCCcHHHHHHcCccceecCCCChHHHHH
Q 019602 122 -G-GSVGAYLGM---TGKRISTPSDALFAGLGTDYVPSGNLGSLKE 162 (338)
Q Consensus 122 -~-~~~a~~lll---tg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~ 162 (338)
. ...+++-.+ .-+..+ +..+.+.|+||.|+++.+......
T Consensus 445 ~~~~~~~~~~~~~~~~~~~~~-~~~~a~~g~vD~VI~P~~tR~~l~ 489 (512)
T TIGR01117 445 AKDPAATRKQKIAEYREEFAN-PYKAAARGYVDDVIEPKQTRPKIV 489 (512)
T ss_pred ccCHHHHHHHHHHHHHHhhcC-HHHHHhcCCCCeeEChHHHHHHHH
Confidence 0 001111111 122346 889999999999999988766543
No 137
>PF01972 SDH_sah: Serine dehydrogenase proteinase; InterPro: IPR002825 This family of archaebacterial proteins, formerly known as DUF114, has been found to be a serine dehydrogenase proteinase distantly related to ClpP proteinases that belong to the serine proteinase superfamily. The family belong to MEROPS peptidase family S49; they are mostly unassigned peptidases but include the archaean signal peptide peptidase 1 []. The family has a catalytic triad of Ser, Asp, His residues, which shows an altered residue ordering compared with the ClpP proteinases but similar to that of the carboxypeptidase clan []. ; GO: 0016021 integral to membrane
Probab=95.81 E-value=0.03 Score=52.30 Aligned_cols=60 Identities=15% Similarity=0.149 Sum_probs=54.3
Q ss_pred HHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeCCCCCcCcCCCch
Q 019602 52 AEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVG 111 (338)
Q Consensus 52 ~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~pe~~lGl~P~~g 111 (338)
...++...+.+.+.|+++.|+..|+-+|.-++++||-.++.+.+.+|--..++|-.|..+
T Consensus 106 AA~~I~~~l~~~~~~v~v~VP~~A~SAGTlIALaADeIvM~p~a~LGpiDPqi~~~pA~s 165 (285)
T PF01972_consen 106 AAEQIARALREHPAKVTVIVPHYAMSAGTLIALAADEIVMGPGAVLGPIDPQIGQYPAAS 165 (285)
T ss_pred HHHHHHHHHHhCCCCEEEEECcccccHHHHHHHhCCeEEECCCCccCCCCccccCCChHH
Confidence 334677788999999999999999999999999999999999999999999999888644
No 138
>PF01039 Carboxyl_trans: Carboxyl transferase domain; InterPro: IPR000022 Members in this domain include biotin dependent carboxylases [, ]. The carboxyl transferase domain carries out the following reaction; transcarboxylation from biotin to an acceptor molecule. There are two recognised types of carboxyl transferase. One of them uses acyl-CoA and the other uses 2-oxo acid as the acceptor molecule of carbon dioxide. All of the members in this family utilise acyl-CoA as the acceptor molecule.; GO: 0016874 ligase activity; PDB: 2F9Y_B 1XO6_B 1XNV_B 3MFM_C 3IBB_A 1XNW_F 3IAV_B 1XNY_A 3IB9_A 3U9S_F ....
Probab=95.61 E-value=0.04 Score=56.19 Aligned_cols=77 Identities=18% Similarity=0.252 Sum_probs=55.3
Q ss_pred HHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCC-eEEeCCCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcC
Q 019602 55 SLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEK-TLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTG 133 (338)
Q Consensus 55 ~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~-a~f~~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg 133 (338)
....++.. ..|+|+++.|+|+|||..++..||++|++++ +.+++. |++ ..+ ..+|
T Consensus 123 ~~~~~~~~-~iP~I~vv~G~~~Gg~A~~~~~~d~~i~~~~~a~i~l~--------------------GP~--vv~-~~~G 178 (493)
T PF01039_consen 123 RAIARLSG-GIPQISVVTGPCTGGGAYLAALSDFVIMVKGTARIFLA--------------------GPR--VVE-SATG 178 (493)
T ss_dssp HHHHHHHT-TS-EEEEEESEEEGGGGHHHHHSSEEEEETTTCEEESS--------------------THH--HHH-HHHS
T ss_pred HHHHHHhc-CCCeEEEEccccccchhhcccccCccccCccceEEEec--------------------ccc--ccc-cccC
Confidence 33445566 9999999999999999999999999999997 776553 111 111 2345
Q ss_pred CCCCcHHHH-------HHcCccceecCCCC
Q 019602 134 KRISTPSDA-------LFAGLGTDYVPSGN 156 (338)
Q Consensus 134 ~~~~~a~eA-------~~~GLv~~vv~~~~ 156 (338)
+.++ .++. ...|.+|.++++++
T Consensus 179 e~~~-~~~lgG~~~h~~~sG~~d~v~~de~ 207 (493)
T PF01039_consen 179 EEVD-SEELGGADVHAAKSGVVDYVVDDEE 207 (493)
T ss_dssp SCTS-HHHHHBHHHHHHTSSSSSEEESSHH
T ss_pred cccc-chhhhhhhhhcccCCCceEEEechH
Confidence 7777 5543 46799999998654
No 139
>TIGR01117 mmdA methylmalonyl-CoA decarboxylase alpha subunit. This model describes methymalonyl-CoA decarboxylase aplha subunit in archaea and bacteria. Metylmalonyl-CoA decarboxylase Na+ pump is a representative of a class of Na+ transport decarboxylases that couples the energy derived by decarboxylation of carboxylic acid substrates to drive the extrusion of Na+ ion across the membrane.
Probab=94.74 E-value=0.038 Score=56.60 Aligned_cols=75 Identities=13% Similarity=0.114 Sum_probs=51.2
Q ss_pred CCCcEEEEecCccchhhhHhhhcCCeEEEeCCe-EEeCCCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHH
Q 019602 63 YKKPYISLMDGVTMGFGIGISGHGRYRIVTEKT-LLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSD 141 (338)
Q Consensus 63 ~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a-~f~~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~e 141 (338)
-.+|+|+++.|+|.||+......||++|+++++ .+++ ++...+....|.. ++.+.+. +.+
T Consensus 153 ~~iP~Isvv~G~~~GG~a~~~al~D~vim~~~~a~i~~-----------aGP~vv~~~~Ge~-------v~~e~lG-Ga~ 213 (512)
T TIGR01117 153 GVVPQISAIMGPCAGGAVYSPALTDFIYMVDNTSQMFI-----------TGPQVIKTVTGEE-------VTAEQLG-GAM 213 (512)
T ss_pred CCCcEEEEEecCCCcHHHHHHHhcCceEEeccceEEEe-----------cChHHHHhhcCcc-------cchhhcc-hHH
Confidence 458999999999999998888899999999964 4444 1222223333322 2444555 555
Q ss_pred HH--HcCccceecCCCC
Q 019602 142 AL--FAGLGTDYVPSGN 156 (338)
Q Consensus 142 A~--~~GLv~~vv~~~~ 156 (338)
.+ .-|.+|.+++++.
T Consensus 214 ~h~~~sGv~d~~~~de~ 230 (512)
T TIGR01117 214 AHNSVSGVAHFIAEDDD 230 (512)
T ss_pred HhccccceeEEecCChH
Confidence 54 4799999987644
No 140
>PLN02820 3-methylcrotonyl-CoA carboxylase, beta chain
Probab=94.44 E-value=0.081 Score=54.79 Aligned_cols=79 Identities=11% Similarity=0.193 Sum_probs=52.4
Q ss_pred HHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCC-eEEeCCCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCC
Q 019602 59 KISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEK-TLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRIS 137 (338)
Q Consensus 59 ~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~-a~f~~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~ 137 (338)
++....+|+|++|-|+|.|||..+...||++|+++. +.+.+ ++...+....|.. .+.+.+.
T Consensus 200 ~ls~~~VP~Isvv~G~~~gGgAy~~a~~D~vim~~~~a~i~~-----------aGP~vV~~~~Ge~-------v~~eeLG 261 (569)
T PLN02820 200 RMSSAGIPQIALVLGSCTAGGAYVPAMADESVIVKGNGTIFL-----------AGPPLVKAATGEE-------VSAEDLG 261 (569)
T ss_pred HHhCCCCCEEEEEeCCCChHHHHHHHhCCceEEecCCcEEEe-----------cCHHHHHhhcCcc-------cCHHHhC
Confidence 455567999999999999999999999999999874 54544 1222222223321 2344444
Q ss_pred cHHHHHH--cCccceecCCCC
Q 019602 138 TPSDALF--AGLGTDYVPSGN 156 (338)
Q Consensus 138 ~a~eA~~--~GLv~~vv~~~~ 156 (338)
+.+.+. -|.++.+++++.
T Consensus 262 -Ga~~h~~~sGv~d~~~~de~ 281 (569)
T PLN02820 262 -GADVHCKVSGVSDHFAQDEL 281 (569)
T ss_pred -CHHHhcccccccccccCchH
Confidence 344443 688988887644
No 141
>COG1030 NfeD Membrane-bound serine protease (ClpP class) [Posttranslational modification, protein turnover, chaperones]
Probab=94.08 E-value=0.16 Score=50.46 Aligned_cols=102 Identities=12% Similarity=0.022 Sum_probs=74.2
Q ss_pred HHHHHHHHHHhhCCCcEEEEec---CccchhhhHhhhcCCeEEEeCCeEEeCCCCCcCc--CC-Cch-HHH------HHh
Q 019602 51 TAEYSLICKISEYKKPYISLMD---GVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGL--FP-DVG-FSY------IAA 117 (338)
Q Consensus 51 ~~~~~~~~~i~~~pkPvIaavn---G~a~GgG~~Lal~cD~rias~~a~f~~pe~~lGl--~P-~~g-~~~------~l~ 117 (338)
....++.+.|.+.|.|||..|. ++|.=.|.-++++||+..+++.+.++--..-.+- .+ ... ... -+.
T Consensus 72 ~sm~~iv~~i~~s~vPV~~yv~p~ga~AaSAGtyI~m~~hiaaMAPgT~iGaa~Pi~~~g~~~~~~~~~n~~~ay~~~~A 151 (436)
T COG1030 72 DSMRQIVRAILNSPVPVIGYVVPDGARAASAGTYILMATHIAAMAPGTNIGAATPIAGGGTSAKEANTTNAAVAYIRSLA 151 (436)
T ss_pred HHHHHHHHHHHcCCCCEEEEEcCCCcchhchhhHHHHhcChhhhCCCCcccccceecCCCCCccchhhHHHHHHHHHHHH
Confidence 4455788999999999888764 3588899999999999999999999876555433 11 111 111 122
Q ss_pred cCCCCh-HHHHHHhhcCCCCCcHHHHHHcCccceecC
Q 019602 118 KGPGGG-SVGAYLGMTGKRISTPSDALFAGLGTDYVP 153 (338)
Q Consensus 118 rl~G~~-~~a~~llltg~~~~~a~eA~~~GLv~~vv~ 153 (338)
+.-|++ ..+.+++-....++ ++||++.|++|-+..
T Consensus 152 ~~~gRN~~~ae~~v~~~~~l~-a~eA~~~~vid~iA~ 187 (436)
T COG1030 152 EERGRNPTWAERFVTENLSLT-AEEALRQGVIDLIAR 187 (436)
T ss_pred HHcCCChHHHHHHhhhccCCC-hhHHHhcCccccccC
Confidence 222321 16788888899999 999999999997754
No 142
>PLN02157 3-hydroxyisobutyryl-CoA hydrolase-like protein
Probab=92.51 E-value=0.19 Score=49.86 Aligned_cols=65 Identities=9% Similarity=0.063 Sum_probs=50.9
Q ss_pred HHHHHhccCchHHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhh---hcCCCCCCCCCCC
Q 019602 236 ALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAV---LVDKDQNPKWNPA 312 (338)
Q Consensus 236 ~~~~l~~~sp~al~~~k~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~af---l~eK~r~p~w~~~ 312 (338)
.++++...+|.+++.+|+.++... .+....+..+...+..++.++|+.|++.+| + +| +.|.|-.+
T Consensus 229 ~~~~i~~~~p~av~~~k~~~~~~~----------~~~~~~l~~~~~~i~~~f~~~d~~ei~~al~~~~-~k-r~~~wa~~ 296 (401)
T PLN02157 229 QLKKLLTDDPSVVESCLEKCAEVA----------HPEKTGVIRRIDLLEKCFSHDTVEEIIDSLEIEA-GR-RKDTWCIT 296 (401)
T ss_pred HHHHHHcCCHHHHHHHHHHHhccc----------CCcchhHHHHHHHHHHHhcCCCHHHHHHHHHhhh-cc-cchHHHHH
Confidence 333888899999999999987532 234566777778888899999999999999 6 56 67888754
No 143
>PLN02820 3-methylcrotonyl-CoA carboxylase, beta chain
Probab=92.42 E-value=0.43 Score=49.51 Aligned_cols=108 Identities=14% Similarity=0.119 Sum_probs=67.0
Q ss_pred HHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeCCCCCcCcCCCchHHHHHhcC-C------
Q 019602 48 EVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKG-P------ 120 (338)
Q Consensus 48 ~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~pe~~lGl~P~~g~~~~l~rl-~------ 120 (338)
...+...+++.++....+|.|++|=|.|+|+|..-...-.+ .++..|..|...+|..++-++...+.+. +
T Consensus 423 G~~~~~a~l~~A~a~~~VP~isvi~g~a~G~g~~aM~g~~~---~~d~~~awp~A~i~vmg~e~aa~il~~~e~~~~~~~ 499 (569)
T PLN02820 423 GIAKAGAKMVMAVACAKVPKITIIVGGSFGAGNYGMCGRAY---SPNFLFMWPNARIGVMGGAQAAGVLAQIERENKKRQ 499 (569)
T ss_pred hHHHHHHHHHHHHHhCCCCEEEEEECCcchHHHHHhcCcCC---CCCEEEECCCCeEEecCHHHHHHHHHHHHhhhhhhc
Confidence 34566778899999999999999999999987654331211 2234444566666777666666555431 1
Q ss_pred C----ChHH-H-HHH--hhcCCCCCcHHHHHHcCccceecCCCChHH
Q 019602 121 G----GGSV-G-AYL--GMTGKRISTPSDALFAGLGTDYVPSGNLGS 159 (338)
Q Consensus 121 G----~~~~-a-~~l--lltg~~~~~a~eA~~~GLv~~vv~~~~l~~ 159 (338)
| .... + ++. -..-+..+ +..|-..|++|.|+++.+.-.
T Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~~~~-p~~aa~~~~vD~VIdP~dTR~ 545 (569)
T PLN02820 500 GIQWSKEEEEAFKAKTVEAYEREAN-PYYSTARLWDDGVIDPADTRR 545 (569)
T ss_pred cccCCccHHHHHHHHHHHHHHHhCC-HHHHHHcCCcCcccCHHHHHH
Confidence 0 0001 0 111 11122345 778999999999998877554
No 144
>COG0777 AccD Acetyl-CoA carboxylase beta subunit [Lipid metabolism]
Probab=91.89 E-value=0.8 Score=42.83 Aligned_cols=91 Identities=19% Similarity=0.145 Sum_probs=65.4
Q ss_pred HHHHHHHhhCCCcEEEEecCccchh-hhHhhhcCCeEEEeCCeEEeCCCCCcCcCCCchHHHHHhcCCCChHHHHHHhhc
Q 019602 54 YSLICKISEYKKPYISLMDGVTMGF-GIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMT 132 (338)
Q Consensus 54 ~~~~~~i~~~pkPvIaavnG~a~Gg-G~~Lal~cD~rias~~a~f~~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~lllt 132 (338)
...+.++.....|.|+.+..+.+|| -.+.++..|+.||-+.|.++|.-.++ .-. ..++-+-.
T Consensus 185 saAl~~l~ea~lpyIsVLt~PTtGGVsASfA~lGDi~iAEP~AlIGFAGpRV-----------IEQ------Tire~LPe 247 (294)
T COG0777 185 SAALKRLSEAGLPYISVLTDPTTGGVSASFAMLGDIIIAEPGALIGFAGPRV-----------IEQ------TIREKLPE 247 (294)
T ss_pred HHHHHHHHhcCCceEEEecCCCccchhHhHHhccCeeecCcccccccCcchh-----------hhh------hhcccCCc
Confidence 3466678888999999999999998 56788889999998888777654432 111 11121222
Q ss_pred CCCCCcHHHHHHcCccceecCCCChHHHHHH
Q 019602 133 GKRISTPSDALFAGLGTDYVPSGNLGSLKEA 163 (338)
Q Consensus 133 g~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~ 163 (338)
| |.+++-.++.|+||.||+..++......
T Consensus 248 g--fQ~aEfLlehG~iD~iv~R~elr~tla~ 276 (294)
T COG0777 248 G--FQTAEFLLEHGMIDMIVHRDELRTTLAS 276 (294)
T ss_pred c--hhhHHHHHHcCCceeeecHHHHHHHHHH
Confidence 2 3338889999999999999887765544
No 145
>TIGR00705 SppA_67K signal peptide peptidase SppA, 67K type. E. coli SohB, which is most closely homologous to the C-terminal duplication of SppA, is predicted to perform a similar function of small peptide degradation, but in the periplasm. Many prokaryotes have a single SppA/SohB homolog that may perform the function of either or both.
Probab=90.76 E-value=0.79 Score=47.81 Aligned_cols=48 Identities=8% Similarity=-0.001 Sum_probs=38.9
Q ss_pred HHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeC
Q 019602 51 TAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAM 99 (338)
Q Consensus 51 ~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~ 99 (338)
...++.+..+....|||||..++.+ -+|.-|+.+||-+++.+.+.+++
T Consensus 113 ~ei~~ai~~fk~sgKpVvA~~~~~~-s~~YylAs~AD~I~~~p~G~v~~ 160 (584)
T TIGR00705 113 VEIGSALSEFKDSGKPVYAYGTNYS-QGQYYLASFADEIILNPMGSVDL 160 (584)
T ss_pred HHHHHHHHHHHhcCCeEEEEEcccc-chhhhhhhhCCEEEECCCceEEe
Confidence 3455566677778899999998876 56889999999999999877755
No 146
>COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]
Probab=90.35 E-value=0.29 Score=49.84 Aligned_cols=36 Identities=22% Similarity=0.231 Sum_probs=32.6
Q ss_pred HHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCe
Q 019602 59 KISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKT 95 (338)
Q Consensus 59 ~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a 95 (338)
+++.. +|.|++|-|.|.|||+-+-..||++|+.++.
T Consensus 159 ~~Sg~-IPqIsvv~G~c~gGgaY~pal~D~~imv~~~ 194 (526)
T COG4799 159 RASGV-IPQISVVMGPCAGGGAYSPALTDFVIMVRDQ 194 (526)
T ss_pred HhccC-CCEEEEEEecCcccccccccccceEEEEcCC
Confidence 44555 9999999999999999999999999999985
No 147
>PF01039 Carboxyl_trans: Carboxyl transferase domain; InterPro: IPR000022 Members in this domain include biotin dependent carboxylases [, ]. The carboxyl transferase domain carries out the following reaction; transcarboxylation from biotin to an acceptor molecule. There are two recognised types of carboxyl transferase. One of them uses acyl-CoA and the other uses 2-oxo acid as the acceptor molecule of carbon dioxide. All of the members in this family utilise acyl-CoA as the acceptor molecule.; GO: 0016874 ligase activity; PDB: 2F9Y_B 1XO6_B 1XNV_B 3MFM_C 3IBB_A 1XNW_F 3IAV_B 1XNY_A 3IB9_A 3U9S_F ....
Probab=84.33 E-value=1.5 Score=44.81 Aligned_cols=106 Identities=15% Similarity=0.098 Sum_probs=63.7
Q ss_pred HHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcC----CeEEEeCCeEEeCCCCCcCcCCCchHHHHHhcC-C--
Q 019602 48 EVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHG----RYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKG-P-- 120 (338)
Q Consensus 48 ~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~c----D~rias~~a~f~~pe~~lGl~P~~g~~~~l~rl-~-- 120 (338)
...+...+++.++..+++|+|+.|-|.+.|||....... |+++|.+++++ |+.++-++...+.+. .
T Consensus 351 g~~~~ga~~~~a~~~~~vP~itvi~~~~~Gga~~am~~~~~~~~~~~Awp~a~~-------~vm~~e~a~~i~~~~~~~~ 423 (493)
T PF01039_consen 351 GIIRAGARLLYALAEATVPKITVIVRKAYGGAYYAMCGRGYGPDFVFAWPTAEI-------GVMGPEGAASILYRDELEA 423 (493)
T ss_dssp THHHHHHHHHHHHHHH-S-EEEEEEEEEEHHHHHHTTGGGGTTSEEEEETT-EE-------ESS-HHHHHHHHTHHHHHH
T ss_pred chHHHHHHHHHHHHcCCCCEEEEEeCCccCcchhhhcccccchhhhhhhhccee-------eecChhhhheeeehhhhhh
Confidence 345667789999999999999999999999877544444 66666555554 555444444443321 0
Q ss_pred ----CChHHH--HHHhh-cCC-CCCcHHHHHHcCccceecCCCChHHHH
Q 019602 121 ----GGGSVG--AYLGM-TGK-RISTPSDALFAGLGTDYVPSGNLGSLK 161 (338)
Q Consensus 121 ----G~~~~a--~~lll-tg~-~~~~a~eA~~~GLv~~vv~~~~l~~~~ 161 (338)
|....+ .+.+- .-+ ..+ +..+...|++|.++++.+.....
T Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~a~~~~~D~ii~p~~tR~~l 471 (493)
T PF01039_consen 424 AEAEGADPEAQRAEKIAEYEDELSS-PYRAASRGYVDDIIDPAETRKVL 471 (493)
T ss_dssp SCHCCHSHHHHHHHHHHHHHHHHSS-HHHHHHTTSSSEESSGGGHHHHH
T ss_pred hhcccchhHHHHHHHHHHHHHhcCC-HHHHHhcCCCCCccCHHHHHHHH
Confidence 000001 11111 111 245 88899999999999988866543
No 148
>PRK10949 protease 4; Provisional
Probab=82.68 E-value=4.4 Score=42.65 Aligned_cols=48 Identities=6% Similarity=0.026 Sum_probs=37.2
Q ss_pred HHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeC
Q 019602 51 TAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAM 99 (338)
Q Consensus 51 ~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~ 99 (338)
...++.+..++...|||||.-+..+ =+|.-|+.+||-+++.+.+.+++
T Consensus 132 ~eI~~ai~~fk~sGKpVvA~~~~~~-s~~YyLASaAD~I~l~P~G~v~~ 179 (618)
T PRK10949 132 QYIGKALREFRDSGKPVYAVGDSYS-QGQYYLASFANKIYLSPQGVVDL 179 (618)
T ss_pred HHHHHHHHHHHHhCCeEEEEecCcc-chhhhhhhhCCEEEECCCceEEE
Confidence 3455667777788899999755554 46889999999999999877654
No 149
>COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]
Probab=76.34 E-value=2.4 Score=43.37 Aligned_cols=111 Identities=15% Similarity=0.099 Sum_probs=67.4
Q ss_pred HHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeCCCCCcCcCCCchHHHHHh-cCC-CCh
Q 019602 46 MIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAA-KGP-GGG 123 (338)
Q Consensus 46 ~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~pe~~lGl~P~~g~~~~l~-rl~-G~~ 123 (338)
.....+....+++++.+..+|.|..+-|.+.|||..-...-.+- ++-.|..|..++|..-+-|+..++. +.+ ...
T Consensus 379 ~~giik~Gakl~~A~aeatVPkitvI~rkayGga~~~M~~~~~~---~~~~~AwP~a~iaVMG~egAv~i~~~k~l~~~~ 455 (526)
T COG4799 379 YGGIIKHGAKLLYAVAEATVPKITVITRKAYGGAYYVMGGKALG---PDFNYAWPTAEIAVMGPEGAVSILYRKELAAAE 455 (526)
T ss_pred hChHHHhhhHHHhhHhhccCCeEEEEecccccceeeeecCccCC---CceeEecCcceeeecCHHHHHHHHHHHHhhccc
Confidence 34456777789999999999999999999999987543332222 5566667777777763333333332 222 111
Q ss_pred HHHHH-------Hhhc-CCCCCcHHHHHHcCccceecCCCChHH
Q 019602 124 SVGAY-------LGMT-GKRISTPSDALFAGLGTDYVPSGNLGS 159 (338)
Q Consensus 124 ~~a~~-------lllt-g~~~~~a~eA~~~GLv~~vv~~~~l~~ 159 (338)
....+ +... -+.+.++.-|.+.|++|.|+++.+...
T Consensus 456 ~~~~~~~~~~~~~~~eY~~~~~~p~~aa~r~~iD~vI~p~~tR~ 499 (526)
T COG4799 456 RPEEREALLRKQLIAEYEEQFSNPYYAAERGYIDAVIDPADTRA 499 (526)
T ss_pred CchhHHHHHHHHHHHHHHHhccchHHHHHhCCCCcccCHHHHHH
Confidence 00110 1110 122222667889999999998766443
No 150
>KOG0540 consensus 3-Methylcrotonyl-CoA carboxylase, non-biotin containing subunit/Acetyl-CoA carboxylase carboxyl transferase, subunit beta [Amino acid transport and metabolism; Lipid transport and metabolism]
Probab=67.66 E-value=12 Score=37.59 Aligned_cols=98 Identities=12% Similarity=0.041 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHHhhCCCcEEEEecCccchhhhH---hhhcCCeEEEeCCeEEeCCCCCcCcCCCchHHHHHh-----cCC
Q 019602 49 VFTAEYSLICKISEYKKPYISLMDGVTMGFGIG---ISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAA-----KGP 120 (338)
Q Consensus 49 ~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~---Lal~cD~rias~~a~f~~pe~~lGl~P~~g~~~~l~-----rl~ 120 (338)
..+....++.+.....+|-|..+.|.+.||... -.+.-|+.+|-+.|++++.-.+- +.-.+. +..
T Consensus 407 IaK~gAklv~a~a~akvpkITiit~~syGG~y~m~sr~~~gd~~yawP~A~IavmG~~~-------a~~Vi~q~~~e~a~ 479 (536)
T KOG0540|consen 407 IAKHGAKLVYAVACAKVPKITIITGGSYGGNYAMCSRGYSGDINYAWPNARIAVMGGKQ-------AANVIFQITLEKAV 479 (536)
T ss_pred hhhhhhhhhhhhhhccCceEEEEecCccCCcccccccccCCceeEEcccceeeeccccc-------hhhhhhhhhhhhhh
Confidence 445556688899999999999999999997555 34455888887777776654421 111222 212
Q ss_pred CChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHH
Q 019602 121 GGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGS 159 (338)
Q Consensus 121 G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~ 159 (338)
..+....+.. |.+|. |...||+|.++++.+...
T Consensus 480 ~~~~~~~E~f--~npy~----a~~Rg~~D~II~p~~tR~ 512 (536)
T KOG0540|consen 480 ALKAPYIEKF--GNPYY----AAARGWDDGIIDPSDTRK 512 (536)
T ss_pred hhcchHHHHh--cCccH----HHHhhccccccChhHhhH
Confidence 1111233333 66666 788999999999877544
No 151
>KOG0840 consensus ATP-dependent Clp protease, proteolytic subunit [Posttranslational modification, protein turnover, chaperones]
Probab=65.91 E-value=22 Score=33.09 Aligned_cols=19 Identities=21% Similarity=0.169 Sum_probs=16.7
Q ss_pred CCCCcHHHHHHcCccceecC
Q 019602 134 KRISTPSDALFAGLGTDYVP 153 (338)
Q Consensus 134 ~~~~~a~eA~~~GLv~~vv~ 153 (338)
+.++ |.||.++||+|.|+.
T Consensus 238 ~fms-a~EA~eyGliD~v~~ 256 (275)
T KOG0840|consen 238 RFMS-AEEAKEYGLIDKVID 256 (275)
T ss_pred ccCC-HHHHHHhcchhhhhc
Confidence 4477 999999999999986
No 152
>PF02601 Exonuc_VII_L: Exonuclease VII, large subunit; InterPro: IPR020579 Exonuclease VII 3.1.11.6 from EC is composed of two nonidentical subunits; one large subunit and 4 small ones []. Exonuclease VII catalyses exonucleolytic cleavage in either 5'-3' or 3'-5' direction to yield 5'-phosphomononucleotides. The large subunit also contains the OB-fold domains (IPR004365 from INTERPRO) that bind to nucleic acids at the N terminus. This entry represents Exonuclease VII, large subunit, C-terminal. ; GO: 0008855 exodeoxyribonuclease VII activity
Probab=50.36 E-value=11 Score=35.99 Aligned_cols=39 Identities=21% Similarity=0.143 Sum_probs=29.9
Q ss_pred HHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCe
Q 019602 55 SLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKT 95 (338)
Q Consensus 55 ~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a 95 (338)
.+..+|..+|.|||++| ||-.=- .-.=+.||+|..||.+
T Consensus 98 ~varai~~~~~PvisaI-GHe~D~-ti~D~vAd~ra~TPta 136 (319)
T PF02601_consen 98 EVARAIAASPIPVISAI-GHETDF-TIADFVADLRAPTPTA 136 (319)
T ss_pred HHHHHHHhCCCCEEEec-CCCCCc-hHHHHHHHhhCCCHHH
Confidence 58889999999999998 777643 2334668888888754
No 153
>smart00250 PLEC Plectin repeat.
Probab=45.98 E-value=16 Score=23.31 Aligned_cols=18 Identities=39% Similarity=0.508 Sum_probs=16.8
Q ss_pred cCCCCCcHHHHHHcCccce
Q 019602 132 TGKRISTPSDALFAGLGTD 150 (338)
Q Consensus 132 tg~~~~~a~eA~~~GLv~~ 150 (338)
||++++ -.||++.||++.
T Consensus 18 t~~~ls-v~eA~~~glid~ 35 (38)
T smart00250 18 TGQKLS-VEEALRRGLIDP 35 (38)
T ss_pred CCCCcC-HHHHHHcCCCCc
Confidence 899999 999999999985
No 154
>PF09905 DUF2132: Uncharacterized conserved protein (DUF2132); InterPro: IPR018668 This entry contains proteins that have no known function. ; PDB: 2JVW_A.
Probab=39.94 E-value=46 Score=24.18 Aligned_cols=37 Identities=27% Similarity=0.556 Sum_probs=25.5
Q ss_pred cccccchhhh-hhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHH
Q 019602 193 PLKLLLPQIT-SCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQ 238 (338)
Q Consensus 193 ~l~~~~~~i~-~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~ 238 (338)
.|..+-..|. +||..++|++.=++-|++ .+||++-.+
T Consensus 23 GW~~L~~~i~i~CF~~~PsikSSLkFLRk---------TpWAR~KVE 60 (64)
T PF09905_consen 23 GWEELGERININCFKNNPSIKSSLKFLRK---------TPWAREKVE 60 (64)
T ss_dssp -HHHHHHHTTSSSTTSS--HHHHHHHHHH---------SHHHHHHHH
T ss_pred CHHHHHhhcccccCCCCCchHHHHHHHhc---------CHhHHHHHH
Confidence 3444445555 899999999999999998 569995443
No 155
>PF00681 Plectin: Plectin repeat; InterPro: IPR001101 Plectin may have a role in cross-linking intermediate filaments, in inter-linking intermediate filaments with microtubules and microfilaments and in anchoring intermediate filaments to the plasma and nuclear membranes. Plectin is recruited into hemidesmosomes, multiprotein complexes that facilitate adhesion of epithelia to the basement membrane, thereby providing linkage between the intracellular keratin filaments to the laminins of the extracellular matrix. Plectin binds to hemidesmosomes through association of its actin-binding domain with the first pair of fibronectin type III repeats and a small part of the connecting segment of the integrin-beta4 subunit, the latter (integrin-alpha6,beta4) acting as a receptor for the extracellular matrix component laminin-5. The plectin repeat is also seen in the cell adhesion junction plaque proteins, desmoplakin, envoplakin, and bullous pemphigoid antigen. The domains in plakins show considerable sequence homology. The N terminus consists of a plakin domain containing a number of subdomains with high alpha-helical content, while the central coiled-coil domain is composed of heptad repeats involved in the dimerisation of plakin, and the C terminus contains one or more homologous repeat sequences referred to plectin repeats []. This entry represents the plectin repeats found in the C terminus of plakin proteins.; GO: 0005856 cytoskeleton; PDB: 1LM7_A 1LM5_A.
Probab=34.95 E-value=15 Score=24.45 Aligned_cols=19 Identities=37% Similarity=0.487 Sum_probs=16.1
Q ss_pred hcCCCCCcHHHHHHcCccce
Q 019602 131 MTGKRISTPSDALFAGLGTD 150 (338)
Q Consensus 131 ltg~~~~~a~eA~~~GLv~~ 150 (338)
-||++++ -++|++.||++.
T Consensus 17 ~tg~~ls-v~~A~~~glId~ 35 (45)
T PF00681_consen 17 ETGERLS-VEEAIQRGLIDS 35 (45)
T ss_dssp TTTEEEE-HHHHHHTTSS-H
T ss_pred CCCeEEc-HHHHHHCCCcCH
Confidence 3789999 999999999984
No 156
>PRK00286 xseA exodeoxyribonuclease VII large subunit; Reviewed
Probab=33.03 E-value=29 Score=34.71 Aligned_cols=39 Identities=21% Similarity=0.171 Sum_probs=29.0
Q ss_pred HHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCe
Q 019602 55 SLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKT 95 (338)
Q Consensus 55 ~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a 95 (338)
.+..+++.+|.|||++| ||-.=- .-.=+.||.|.+||.+
T Consensus 215 ~v~~ai~~~~~Pvis~I-GHE~D~-tl~D~vAd~ra~TPta 253 (438)
T PRK00286 215 AVARAIAASRIPVISAV-GHETDF-TIADFVADLRAPTPTA 253 (438)
T ss_pred HHHHHHHcCCCCEEEec-cCCCCc-cHHHHhhhccCCChHH
Confidence 58889999999999998 676532 2234668888888753
No 157
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=31.68 E-value=79 Score=31.57 Aligned_cols=38 Identities=8% Similarity=-0.040 Sum_probs=26.7
Q ss_pred EEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhh
Q 019602 25 VICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISE 62 (338)
Q Consensus 25 F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 62 (338)
||.||||..+.......+++....+++.....+..++.
T Consensus 90 yC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~ 127 (429)
T KOG0595|consen 90 YCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHE 127 (429)
T ss_pred eCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 89999999988655555666666677766665555554
No 158
>PF14222 MOR2-PAG1_N: Cell morphogenesis N-terminal
Probab=25.81 E-value=1.6e+02 Score=30.66 Aligned_cols=62 Identities=16% Similarity=0.298 Sum_probs=51.9
Q ss_pred cchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHHH
Q 019602 197 LLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKV 258 (338)
Q Consensus 197 ~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~~ 258 (338)
....|.+|+..+-+.+++++-|-+..-+.|+++.+-|.+++++++...|.+..++.-..+-.
T Consensus 455 ~i~aiPrcL~~~i~~~~lielL~R~tvHvd~~I~~~A~~aLk~la~~~p~~~~vi~~Fa~Fi 516 (552)
T PF14222_consen 455 CIQAIPRCLPSSIPFKSLIELLCRGTVHVDPNIRESAAQALKRLARDKPNRQQVITGFARFI 516 (552)
T ss_pred HHHHccccCCCCCcHHHHHHHHhcccccCCHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 44567889988889999999999999999999999999999999999886665555544443
No 159
>PF11372 DUF3173: Domain of unknown function (DUF3173); InterPro: IPR021512 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=24.26 E-value=71 Score=22.90 Aligned_cols=29 Identities=34% Similarity=0.434 Sum_probs=24.5
Q ss_pred HhhhcCCCCCCCCCCCCcCCCCHHHHHhhh
Q 019602 297 RAVLVDKDQNPKWNPASLEEVNQSEVEALF 326 (338)
Q Consensus 297 ~afl~eK~r~p~w~~~~~~~v~~~~v~~~~ 326 (338)
++.++++ ..+-|+.+++.-|+.+.|++++
T Consensus 27 K~~lV~~-G~~~Y~nkRlg~VP~~~VEeiL 55 (59)
T PF11372_consen 27 KALLVQK-GFSFYNNKRLGRVPASAVEEIL 55 (59)
T ss_pred HHHHHHc-CCCcccCCccCcccHHHHHHHH
Confidence 4566666 6788999999999999999986
No 160
>COG3592 Uncharacterized conserved protein [Function unknown]
Probab=22.38 E-value=76 Score=23.47 Aligned_cols=44 Identities=16% Similarity=0.391 Sum_probs=32.5
Q ss_pred hCCCCCHHHHHHhhhcCCCCCCCCCCCCcCCCCHHHHHhhhcCCCCCC
Q 019602 286 SSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGTGV 333 (338)
Q Consensus 286 ~~~~~d~~eg~~afl~eK~r~p~w~~~~~~~v~~~~v~~~~~~~~~~~ 333 (338)
+..+.++..|-...+ ++.|.| |=.+ +.++.|++++...-|+++-
T Consensus 25 C~Hs~nCV~Gn~~vF-~~~rkP-WI~P--d~~~ve~i~~vi~sCPSGA 68 (74)
T COG3592 25 CAHSGNCVRGNPKVF-NLGRKP-WIMP--DAVDVEEIVKVIDTCPSGA 68 (74)
T ss_pred eecccceecCCHhhc-ccCCCC-ccCC--CCCCHHHHHHHHHhCCchh
Confidence 445667777776666 344677 7666 8999999999988887763
No 161
>TIGR02814 pfaD_fam PfaD family protein. The protein PfaD is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. Several other members of the seed alignment for this model are found in loci presumed to act in polyketide biosyntheses per se.
Probab=20.59 E-value=9e+02 Score=24.53 Aligned_cols=200 Identities=11% Similarity=0.116 Sum_probs=105.2
Q ss_pred CCCcEEEE---ecCccchhhhHhhhcCCeEEEeCCeEEeCCCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCC----
Q 019602 63 YKKPYISL---MDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKR---- 135 (338)
Q Consensus 63 ~pkPvIaa---vnG~a~GgG~~Lal~cD~rias~~a~f~~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~---- 135 (338)
.|+||||+ .+|..+. ..|++.+|++.+- +...+.+|. |.+...++++.....
T Consensus 223 ~~VpViAAGGI~t~~~va--AAlaLGAdgV~~G-T~flat~Es------------------gas~~~K~~L~~a~~~DT~ 281 (444)
T TIGR02814 223 KPIRVGAAGGIGTPEAAA--AAFMLGADFIVTG-SVNQCTVEA------------------GTSDNVKKLLAKADVQDTA 281 (444)
T ss_pred CCceEEEeCCCCCHHHHH--HHHHcCCcEEEec-cHHHhCccc------------------cCCHHHHHHHHhCCCcCeE
Confidence 37889987 3444443 4567889988761 111122222 211245555543322
Q ss_pred CCcHHHHHHcCccceecCCCC-hHHHHHHHHhcccCCCchhHHHHHHHhhcCCCCCCcccc-ccchhhh-hhcCCCCCHH
Q 019602 136 ISTPSDALFAGLGTDYVPSGN-LGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLK-LLLPQIT-SCFSSEKSVR 212 (338)
Q Consensus 136 ~~~a~eA~~~GLv~~vv~~~~-l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~-~~~~~i~-~~f~~~~~~~ 212 (338)
+.-+.|..++|.=-+|+..+- +..++.+|-+ +-..|..-. .++ ..+..|+ ++|.. +++
T Consensus 282 ~ap~~dmfe~G~~~qvlkrg~~f~~ra~kl~~-------------ly~~~~s~~----~i~~~~~~~~e~~~f~~--~~~ 342 (444)
T TIGR02814 282 YAPAGDMFELGVKLQVLKRGTLFPARANKLYE-------------LYRRYDSLE----ALPAATRAQLEKKYFKR--SLD 342 (444)
T ss_pred EecCccccccCceeeeeccccCcHHHHHHHHH-------------HHHhCCChh----hCCHHHHHHHHHHHhcC--CHH
Confidence 221567888898888887766 4455544332 222221111 111 1233344 56655 799
Q ss_pred HHHHHHHhccccc-chhHHHHHHHHHHHHhccCchHHHHHHHH-HHHHhhhcCCCccccCCHHHHHHHHHHHHhhhCCCC
Q 019602 213 QIIEELKKHQSSA-ETSVAQWADEALQGMGKGAPFSLCLTQKY-FSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRS 290 (338)
Q Consensus 213 ei~~~L~~~~~~~-~~~~~~~A~~~~~~l~~~sp~al~~~k~~-l~~~~~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~ 290 (338)
|+++.+++.-+.. ++ +.+++-.+.|-.=|.+.++- |.... .+.-.-+.+.++-.+.+.+|
T Consensus 343 ~vw~~~~~~~~~~~~p-------~~~~~a~~~pk~~malvfrwy~~~~~-----------~~a~~g~~~~~~dyqi~cgp 404 (444)
T TIGR02814 343 DVWEETRAYYIGRHDP-------AEIERAERDPKHKMALVFRWYFGHSS-----------RWANTGEEERRVDYQIWCGP 404 (444)
T ss_pred HHHHHHHHHHhccCCH-------HHHHhhccCchhHHHHHHHHHHHHhh-----------HHHhcCCccccccceeecCc
Confidence 9998877633222 22 22336667788888888873 33322 23222233444445566666
Q ss_pred CHHHHHHhhhcCCCCCCCCCCCCcCCCCHHHH
Q 019602 291 DFAEGVRAVLVDKDQNPKWNPASLEEVNQSEV 322 (338)
Q Consensus 291 d~~eg~~afl~eK~r~p~w~~~~~~~v~~~~v 322 (338)
. .-+...++ .+..--.|..+.+++|..-.+
T Consensus 405 a-~gafn~wv-~gt~l~~~~~r~v~~ia~~lm 434 (444)
T TIGR02814 405 A-IGAFNQWV-KGTYLEDWRNRHVDQIAKHLM 434 (444)
T ss_pred c-hhhhhHhh-cCCcccccccCcHHHHHHHHH
Confidence 4 34555555 232334688888877764433
No 162
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=20.56 E-value=1.3e+02 Score=27.46 Aligned_cols=39 Identities=15% Similarity=0.113 Sum_probs=26.1
Q ss_pred HHHHHHHHHHhhCC--CcEEEEecCccchhhhHhhhcCCeE
Q 019602 51 TAEYSLICKISEYK--KPYISLMDGVTMGFGIGISGHGRYR 89 (338)
Q Consensus 51 ~~~~~~~~~i~~~p--kPvIaavnG~a~GgG~~Lal~cD~r 89 (338)
.........+...+ .+-=..+-|.|+||++.+.+++...
T Consensus 94 ~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~ 134 (236)
T COG0412 94 ADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP 134 (236)
T ss_pred HHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC
Confidence 34444555555555 3322345699999999999999873
No 163
>KOG0333 consensus U5 snRNP-like RNA helicase subunit [RNA processing and modification]
Probab=20.08 E-value=71 Score=33.08 Aligned_cols=30 Identities=20% Similarity=0.213 Sum_probs=26.8
Q ss_pred CcEEEEecCccchh-hhHhhhcCCeEEEeCC
Q 019602 65 KPYISLMDGVTMGF-GIGISGHGRYRIVTEK 94 (338)
Q Consensus 65 kPvIaavnG~a~Gg-G~~Lal~cD~rias~~ 94 (338)
.-||+.|+|+.+-- ||.|.+.|+++|||+.
T Consensus 351 ~r~vsvigg~s~EEq~fqls~gceiviatPg 381 (673)
T KOG0333|consen 351 IRTVSVIGGLSFEEQGFQLSMGCEIVIATPG 381 (673)
T ss_pred ceEEEEecccchhhhhhhhhccceeeecCch
Confidence 66899999999976 8999999999999953
Done!