Query 019605
Match_columns 338
No_of_seqs 204 out of 1749
Neff 8.1
Searched_HMMs 13730
Date Mon Mar 25 04:21:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019605.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/019605hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1d5va_ a.4.5.14 (A:) Adipocyt 10.4 1.4E+02 0.01 19.9 4.0 51 282-333 25-78 (94)
2 d2c6ya1 a.4.5.14 (A:1-98) Inte 10.3 2.4E+02 0.017 18.8 5.3 50 283-333 25-77 (98)
3 d1kq8a_ a.4.5.14 (A:) HFH-1 (H 10.1 1.8E+02 0.013 18.4 4.3 50 283-333 18-71 (75)
4 d2ra2a1 b.38.1.6 (A:4-56) Unch 8.6 43 0.0031 20.3 0.5 17 4-20 9-25 (53)
5 d2jn0a1 b.38.1.6 (A:4-53) Hypo 8.0 40 0.0029 20.2 0.1 17 4-20 8-24 (50)
6 d2heka1 a.211.1.1 (A:1-369) Hy 7.9 64 0.0046 26.8 1.5 16 100-115 79-94 (369)
7 d1m6ia3 d.87.1.1 (A:478-608) A 7.7 62 0.0045 23.4 1.0 13 324-336 80-92 (131)
8 d2k57a1 b.38.1.6 (A:2-53) Unch 6.9 50 0.0037 19.9 0.2 17 4-20 10-26 (52)
9 d1e4ra_ g.9.1.1 (A:) Beta-defe 6.7 73 0.0053 16.6 0.7 9 327-335 8-16 (35)
10 d2o6ia1 a.211.1.1 (A:1-453) Hy 6.5 77 0.0056 27.7 1.3 12 103-114 108-119 (453)
No 1
>d1d5va_ a.4.5.14 (A:) Adipocyte-transcription factor FREAC-11 (s12, fkh-14) {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.36 E-value=1.4e+02 Score=19.91 Aligned_cols=51 Identities=18% Similarity=0.401 Sum_probs=28.2
Q ss_pred ccHHHHHHHHHHhhhcccccCCccHHHHHHHhh--cccEE-ecCCCCCCCccEEE
Q 019605 282 YHAMEATKAIKPILGEYYQFDGTPFYKAMWREA--KECLY-VEPDEGDQNKGVFW 333 (338)
Q Consensus 282 ~~Lp~~~~~l~~~~~~~~~~~~~~~~~al~~~~--~~~~~-~~~~~~~~~~~~~~ 333 (338)
--|.++++.+++.+ ++++.....+-.++.-.. ..|.. +..+.++.+||-+|
T Consensus 25 ltL~eIY~~i~~~f-pyfr~~~~gWkNSIRHnLSln~~F~kv~~~~~~~gkg~~W 78 (94)
T d1d5va_ 25 ITLNGIYQFIMDRF-PFYRENKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYW 78 (94)
T ss_dssp BCHHHHHHHHHHHC-THHHHCCTTHHHHHHHHHHHCSSEEECCCCTTSCSCCCCE
T ss_pred ccHHHHHHHHHHHC-CccCccccchHHHHHHHccccceEEEcCcCCCCCCCCceE
Confidence 34778888888777 445554444333443333 34433 34455666777654
No 2
>d2c6ya1 a.4.5.14 (A:1-98) Interleukin enhancer binding factor {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.30 E-value=2.4e+02 Score=18.81 Aligned_cols=50 Identities=16% Similarity=0.327 Sum_probs=27.2
Q ss_pred cHHHHHHHHHHhhhcccccCCccHHHHHHHhh--cccEE-ecCCCCCCCccEEE
Q 019605 283 HAMEATKAIKPILGEYYQFDGTPFYKAMWREA--KECLY-VEPDEGDQNKGVFW 333 (338)
Q Consensus 283 ~Lp~~~~~l~~~~~~~~~~~~~~~~~al~~~~--~~~~~-~~~~~~~~~~~~~~ 333 (338)
-|.++++.+++.+ +||+.....+-.++.-.. ..|.. +..+.++.+||-+|
T Consensus 25 tL~eIy~~i~~~f-pyfr~~~~gWkNSIRHnLS~n~~F~kv~r~~~~~gKg~~W 77 (98)
T d2c6ya1 25 TLNGIYTHITKNY-PYYRTADKGWQNSIRHNLSLNRYFIKVPRSQEEPGKGSFW 77 (98)
T ss_dssp EHHHHHHHHHHHC-TTSCTTCHHHHHHHHHHHHHSTTEEEECCCTTSCCSSCEE
T ss_pred cHHHHHHHHHHhC-cccccCCCCcchhhchhcccccceEeccCCCCCCCCCceE
Confidence 4778888888777 345554433222332222 35533 44445566788765
No 3
>d1kq8a_ a.4.5.14 (A:) HFH-1 (HNF-3 forkhead homolog-1) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=10.05 E-value=1.8e+02 Score=18.39 Aligned_cols=50 Identities=14% Similarity=0.276 Sum_probs=26.0
Q ss_pred cHHHHHHHHHHhhhcccccCCccHHHHHHHhh--ccc-EEecCCC-CCCCccEEE
Q 019605 283 HAMEATKAIKPILGEYYQFDGTPFYKAMWREA--KEC-LYVEPDE-GDQNKGVFW 333 (338)
Q Consensus 283 ~Lp~~~~~l~~~~~~~~~~~~~~~~~al~~~~--~~~-~~~~~~~-~~~~~~~~~ 333 (338)
-|.++++.+++.++ +|+......-.++.-.. ..| .-++.+. +..+||-+|
T Consensus 18 tL~eIy~~i~~~fp-y~r~~~~gWkNSIRHnLS~n~~F~kv~r~~~~~~gKg~~W 71 (75)
T d1kq8a_ 18 TLAEINEYLMGKFP-FFRGSYTGWRNSVRHNLSLNDCFVKVLRDPSRPWGKDNYW 71 (75)
T ss_dssp CHHHHHHHHHHHCT-TGGGTCSCCHHHHHHHHHHHTCCEECSSCSCCSSSCCCCE
T ss_pred cHHHHHHHHHHhCc-ccccCCccchhHhhecccccceeEecCCCCCCCCCCccEE
Confidence 47788888888774 45554443333333222 234 2223333 334788665
No 4
>d2ra2a1 b.38.1.6 (A:4-56) Uncharacterized protein YgdI {Salmonella typhimurium [TaxId: 90371]}
Probab=8.63 E-value=43 Score=20.26 Aligned_cols=17 Identities=29% Similarity=0.413 Sum_probs=14.3
Q ss_pred CCccccCCCCCCCCCCC
Q 019605 4 GGRMAVPSTPMKVDSDP 20 (338)
Q Consensus 4 ~~~~~~~~~~~~~~~~~ 20 (338)
-|||.|-..+|+++++.
T Consensus 9 DG~~IvT~gKP~~D~dT 25 (53)
T d2ra2a1 9 DGRSIVTDGKPQTDNDT 25 (53)
T ss_dssp TSCEEECSSCCEECTTT
T ss_pred CCcEEEeCCCccccCCC
Confidence 48999999999988875
No 5
>d2jn0a1 b.38.1.6 (A:4-53) Hypothetical lipoprotein YgdR {Escherichia coli [TaxId: 562]}
Probab=7.96 E-value=40 Score=20.16 Aligned_cols=17 Identities=29% Similarity=0.540 Sum_probs=14.0
Q ss_pred CCccccCCCCCCCCCCC
Q 019605 4 GGRMAVPSTPMKVDSDP 20 (338)
Q Consensus 4 ~~~~~~~~~~~~~~~~~ 20 (338)
-|||.+-..+|++++|.
T Consensus 8 dG~~I~T~gKP~~D~dT 24 (50)
T d2jn0a1 8 DGRMILTDGKPEIDDDT 24 (50)
T ss_dssp TSCEEEBCCCCEEETTT
T ss_pred CCCEEEeCCCccccCCC
Confidence 48888888999888774
No 6
>d2heka1 a.211.1.1 (A:1-369) Hypothetical protein aq_1910 {Aquifex aeolicus [TaxId: 63363]}
Probab=7.92 E-value=64 Score=26.80 Aligned_cols=16 Identities=31% Similarity=0.463 Sum_probs=12.2
Q ss_pred hhhhhcccccccccCC
Q 019605 100 VWVVAHECGHHAFSDY 115 (338)
Q Consensus 100 l~~l~Hd~~H~s~~~~ 115 (338)
+..++||.||+.|+..
T Consensus 79 ~A~LlHDiGh~PFsH~ 94 (369)
T d2heka1 79 LAGLLHDLGHPPFSHT 94 (369)
T ss_dssp HHHHTTTTTCCSSSSC
T ss_pred HHHHHhhcccchhhhh
Confidence 3346899999998763
No 7
>d1m6ia3 d.87.1.1 (A:478-608) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.73 E-value=62 Score=23.36 Aligned_cols=13 Identities=38% Similarity=0.654 Sum_probs=8.3
Q ss_pred CCCCCccEEEeec
Q 019605 324 EGDQNKGVFWYRN 336 (338)
Q Consensus 324 ~~~~~~~~~~~~~ 336 (338)
.++-+|||+||-+
T Consensus 80 ~e~ygKGVIFYLr 92 (131)
T d1m6ia3 80 GEDYGKGVIFYLR 92 (131)
T ss_dssp ---CCEEEEEEEE
T ss_pred cCCCCceEEEEec
Confidence 3456799999964
No 8
>d2k57a1 b.38.1.6 (A:2-53) Uncharacterized protein PSPPH2109 {Pseudomonas syringae [TaxId: 317]}
Probab=6.91 E-value=50 Score=19.86 Aligned_cols=17 Identities=24% Similarity=0.280 Sum_probs=13.7
Q ss_pred CCccccCCCCCCCCCCC
Q 019605 4 GGRMAVPSTPMKVDSDP 20 (338)
Q Consensus 4 ~~~~~~~~~~~~~~~~~ 20 (338)
-|||.+-.++|++++|.
T Consensus 10 dGr~i~T~gkP~~d~dt 26 (52)
T d2k57a1 10 DGREIQAVDTPKYDEES 26 (52)
T ss_dssp SSCEEEESSCCEECTTT
T ss_pred CCcEEEcCCCccccCCC
Confidence 48888888888888764
No 9
>d1e4ra_ g.9.1.1 (A:) Beta-defensin, BD {Mouse (Mus musculus), MBD6 [TaxId: 10090]}
Probab=6.66 E-value=73 Score=16.64 Aligned_cols=9 Identities=44% Similarity=0.848 Sum_probs=7.2
Q ss_pred CCccEEEee
Q 019605 327 QNKGVFWYR 335 (338)
Q Consensus 327 ~~~~~~~~~ 335 (338)
.|+||-+||
T Consensus 8 rnggicqyr 16 (35)
T d1e4ra_ 8 RNGGICQYR 16 (35)
T ss_dssp GGTCEEESC
T ss_pred ecCCEEEEE
Confidence 468899987
No 10
>d2o6ia1 a.211.1.1 (A:1-453) Hypothetical protein EF1143 {Enterococcus faecalis [TaxId: 1351]}
Probab=6.51 E-value=77 Score=27.73 Aligned_cols=12 Identities=33% Similarity=0.791 Sum_probs=10.2
Q ss_pred hhcccccccccC
Q 019605 103 VAHECGHHAFSD 114 (338)
Q Consensus 103 l~Hd~~H~s~~~ 114 (338)
+.||.||+.++.
T Consensus 108 LlHDiGHgPfSH 119 (453)
T d2o6ia1 108 LLHDVGHGPYSH 119 (453)
T ss_dssp HHTTTTCCTTHH
T ss_pred HHhccCcccccc
Confidence 569999999864
Done!