Your job contains 1 sequence.
>019613
MANAGGIPGPEQKPEALNPNLDEIEEEEEEDDDVVEEEDDDDLEEDDDAAQPQRKSRVDR
PKIENLFRRIRNGPVPLRVHDVIVKGNTKTKDCLIEAELDAIRNATTMQEIIQAANIINY
KLRELECFDSVEITLDSGPPELPGTSNVIIQVVETKTPLSGQIGTYTKGEAKSSTVEGSL
KYKNGFGYGDLWDASLAYGFDRSAEVSAGVYLPRFKGLVTPMTARVFLQSQDWLKFSSYK
EQSLGLSLGLFSIRHHDLVYNLAWRTLTDPSHMSSNTVRRQLGHDFLSSLKYTFKFDKRN
SPLRPTRGYAFVSTTQIGGLAPDSRCLRFLRQFFCLLL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 019613
(338 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2074618 - symbol:AT3G11070 "AT3G11070" species... 1005 2.3e-101 1
TAIR|locus:2169702 - symbol:AT5G05520 "AT5G05520" species... 1003 3.8e-101 1
ZFIN|ZDB-GENE-041114-30 - symbol:samm50l "sorting and ass... 186 4.0e-12 1
UNIPROTKB|Q9Y512 - symbol:SAMM50 "Sorting and assembly ma... 182 1.2e-11 1
MGI|MGI:1915903 - symbol:Samm50 "sorting and assembly mac... 182 1.2e-11 1
UNIPROTKB|F6UPR4 - symbol:SAMM50 "Uncharacterized protein... 177 4.7e-11 1
UNIPROTKB|E1C8A2 - symbol:SAMM50 "Uncharacterized protein... 177 5.0e-11 1
UNIPROTKB|E2QSZ0 - symbol:SAMM50 "Uncharacterized protein... 177 5.0e-11 1
RGD|1303219 - symbol:Samm50 "sorting and assembly machine... 174 1.1e-10 1
UNIPROTKB|G3MZZ3 - symbol:SAMM50 "Sorting and assembly ma... 172 1.9e-10 1
UNIPROTKB|Q2HJ55 - symbol:SAMM50 "Sorting and assembly ma... 172 1.9e-10 1
ZFIN|ZDB-GENE-040426-806 - symbol:samm50 "sorting and ass... 164 1.7e-09 1
ASPGD|ASPL0000065328 - symbol:AN10873 species:162425 "Eme... 152 4.8e-08 1
POMBASE|SPAC17C9.06 - symbol:sam50 "mitochondrial sorting... 148 1.2e-07 1
UNIPROTKB|G4N9M6 - symbol:MGG_09978 "Sorting assembly mac... 143 5.1e-07 1
FB|FBgn0033989 - symbol:CG7639 species:7227 "Drosophila m... 127 2.6e-05 1
UNIPROTKB|Q0C1B3 - symbol:bamA "Outer membrane protein as... 89 4.2e-05 2
UNIPROTKB|Q5HX37 - symbol:bamA "Outer membrane protein as... 125 9.0e-05 1
TIGR_CMR|CJE_0124 - symbol:CJE_0124 "outer membrane prote... 125 9.0e-05 1
WB|WBGene00001662 - symbol:gop-3 species:6239 "Caenorhabd... 119 0.00020 1
>TAIR|locus:2074618 [details] [associations]
symbol:AT3G11070 "AT3G11070" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0031307 "integral to mitochondrial outer membrane"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
InterPro:IPR000184 InterPro:IPR010827 Pfam:PF01103 Pfam:PF07244
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0031307 EMBL:AC009991
EMBL:AC073395 eggNOG:COG4775 ProtClustDB:CLSN2684056 EMBL:AY099576
EMBL:BT002158 IPI:IPI00540026 RefSeq:NP_187718.1 UniGene:At.39812
ProteinModelPortal:Q9SRL6 IntAct:Q9SRL6 PaxDb:Q9SRL6 PRIDE:Q9SRL6
EnsemblPlants:AT3G11070.1 GeneID:820278 KEGG:ath:AT3G11070
TAIR:At3g11070 HOGENOM:HOG000241488 InParanoid:Q9SRL6 OMA:CIADRFF
PhylomeDB:Q9SRL6 Genevestigator:Q9SRL6 Uniprot:Q9SRL6
Length = 520
Score = 1005 (358.8 bits), Expect = 2.3e-101, P = 2.3e-101
Identities = 184/269 (68%), Positives = 228/269 (84%)
Query: 56 SRVDRPKIENLFRRIRNGPVPLRVHDVIVKGNTKTKDCLIEAELDAIRNATTMQEIIQAA 115
S VDR K E+LFRR+R PVP+RVHDVI+ GN KTKD +IEAE+DA+R ATT+QE+++A+
Sbjct: 56 SSVDRIKAESLFRRMRAAPVPVRVHDVIIGGNEKTKDHIIEAEVDAVREATTLQELLEAS 115
Query: 116 NIINYKLRELECFDSVEITLDSGPPELPGTSNVIIQVVETKTPLSGQIGTYTKGEAKSST 175
+ N LR L+ FDSV ITLDSGPPELPGT+NV+I VVE+K+PL+GQIG YT+ EA+SS+
Sbjct: 116 RVANSNLRALDIFDSVNITLDSGPPELPGTTNVVIDVVESKSPLTGQIGAYTRAEARSSS 175
Query: 176 VEGSLKYKNGFGYGDLWDASLAYGFDRSAEVSAGVYLPRFKGLVTPMTARVFLQSQDWLK 235
VE SLKYKN FGYGD+WD S+ YG D SAEV G+YLPRF+GL TP T+R+FL +QDWLK
Sbjct: 176 VEASLKYKNIFGYGDIWDGSIVYGCDNSAEVGLGMYLPRFRGLSTPFTSRLFLSTQDWLK 235
Query: 236 FSSYKEQSLGLSLGLFSIRHHDLVYNLAWRTLTDPSHMSSNTVRRQLGHDFLSSLKYTFK 295
FSSYKE+SLGLSLGLFS ++H+L+Y +AWR L DPS ++ ++RRQLGH LS+LKYTF+
Sbjct: 236 FSSYKERSLGLSLGLFSSKYHELIYTIAWRNLIDPSQAAAVSIRRQLGHSLLSALKYTFR 295
Query: 296 FDKRNSPLRPTRGYAFVSTTQIGGLAPDS 324
FD+RNS LRPT GYAF+ST+QIGGLAPDS
Sbjct: 296 FDQRNSSLRPTNGYAFISTSQIGGLAPDS 324
>TAIR|locus:2169702 [details] [associations]
symbol:AT5G05520 "AT5G05520" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0009536
"plastid" evidence=IDA] [GO:0006486 "protein glycosylation"
evidence=RCA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
"sugar mediated signaling pathway" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0019915 "lipid storage" evidence=RCA] [GO:0043090 "amino acid
import" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] [GO:0051604 "protein maturation" evidence=RCA]
InterPro:IPR000184 InterPro:IPR010827 Pfam:PF01103 Pfam:PF07244
GO:GO:0005739 EMBL:CP002688 GO:GO:0009536 EMBL:AB005241
GO:GO:0019867 OMA:RNSAIFP EMBL:AY059801 EMBL:AY093246
IPI:IPI00524138 RefSeq:NP_568157.1 UniGene:At.24120
ProteinModelPortal:Q9FFG3 SMR:Q9FFG3 PRIDE:Q9FFG3
EnsemblPlants:AT5G05520.1 GeneID:830435 KEGG:ath:AT5G05520
TAIR:At5g05520 InParanoid:Q9FFG3 PhylomeDB:Q9FFG3
ProtClustDB:CLSN2684056 Genevestigator:Q9FFG3 Uniprot:Q9FFG3
Length = 524
Score = 1003 (358.1 bits), Expect = 3.8e-101, P = 3.8e-101
Identities = 182/266 (68%), Positives = 231/266 (86%)
Query: 59 DRPKIENLFRRIRNGPVPLRVHDVIVKGNTKTKDCLIEAELDAIRNATTMQEIIQAANII 118
DR K E+LFRR+R PV +RVHDVIVKGN KTKD +IEAE+D +R ATT+QE+++A+ +
Sbjct: 56 DRIKAESLFRRMRATPVAVRVHDVIVKGNEKTKDHVIEAEVDVVRQATTLQELLKASKVA 115
Query: 119 NYKLRELECFDSVEITLDSGPPELPGTSNVIIQVVETKTPLSGQIGTYTKGEAKSSTVEG 178
N+ L+ L+ FDSV+ITLDSGPPELPGT+NV+I VVE+K+P++GQIGT+TK EA+SS++EG
Sbjct: 116 NFNLQALDIFDSVKITLDSGPPELPGTTNVVIDVVESKSPITGQIGTFTKAEARSSSLEG 175
Query: 179 SLKYKNGFGYGDLWDASLAYGFDRSAEVSAGVYLPRFKGLVTPMTARVFLQSQDWLKFSS 238
SLKYKN FGYGD+WD SLAYG D SAEV G+YLPRF+G TP T+RV+L +QDWLKFSS
Sbjct: 176 SLKYKNIFGYGDIWDGSLAYGCDHSAEVGLGMYLPRFRGRPTPFTSRVYLSTQDWLKFSS 235
Query: 239 YKEQSLGLSLGLFSIRHHDLVYNLAWRTLTDPSHMSSNTVRRQLGHDFLSSLKYTFKFDK 298
YKE++LGLSLGL + ++H+L YN+AWR L DPS M+S ++RRQLGH+ +S+LKYTFKFD+
Sbjct: 236 YKERALGLSLGLIASKYHELAYNIAWRNLIDPSQMASRSIRRQLGHNLVSALKYTFKFDQ 295
Query: 299 RNSPLRPTRGYAFVSTTQIGGLAPDS 324
RNS LRPTRGY+F+ST+QIGGLAPDS
Sbjct: 296 RNSSLRPTRGYSFISTSQIGGLAPDS 321
>ZFIN|ZDB-GENE-041114-30 [details] [associations]
symbol:samm50l "sorting and assembly machinery
component 50 homolog, like" species:7955 "Danio rerio" [GO:0019867
"outer membrane" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0016020 "membrane" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005741 "mitochondrial outer membrane" evidence=IEA]
InterPro:IPR000184 Pfam:PF01103 ZFIN:ZDB-GENE-041114-30
GO:GO:0016021 GO:GO:0005741 eggNOG:COG4775 OrthoDB:EOG4H72BD
HOGENOM:HOG000015411 EMBL:BC085536 IPI:IPI00489535
RefSeq:NP_001007344.1 UniGene:Dr.124972 ProteinModelPortal:Q5U3I0
GeneID:492471 KEGG:dre:492471 CTD:492471 NextBio:20865031
Uniprot:Q5U3I0
Length = 469
Score = 186 (70.5 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 68/249 (27%), Positives = 112/249 (44%)
Query: 79 VHDVIVKGNTKTKDCLIEAELDAIRNATTMQEIIQAANIINYKLRELECFDSVEITLD-- 136
V V ++G +TK+ + E+ + A + E+++ ++ +L L F VE+ +D
Sbjct: 47 VQHVNIEGLGRTKEDYLGYEISDVFTARNLVEVMRKSHEARQRLLRLGIFRDVEVVIDIS 106
Query: 137 SGPPELPGTSNVIIQVVETKTPLSGQIGTYTKGEAKSSTVEGSLKYKNGFGYGDLWDASL 196
G LP +V +V E K L+G T G + S V G +K N G G+
Sbjct: 107 EGADALPNGLDVTFEVTELKR-LTGSYNTMV-GNNEGSMVLG-IKLPNMLGRGEKLTFQF 163
Query: 197 AYGFDRSAEVSAGV--YLPRFKGLVTPMTARVFLQSQDWLKFSSYKEQSLG----LSLGL 250
+YG + E S G+ + P+ T ++ + + +SS KE G LSL L
Sbjct: 164 SYG---TKETSYGLSFFKPQSGYFERNFTVNLYKVTGQF-PWSSLKETDRGVSTELSLPL 219
Query: 251 FSIRHHDLVYNLAWRTLTDPSHMSSNTVRRQLGHDFLSSLKYTFKFDKRNSPLRPTRGYA 310
+ + H L + WR L + +S VR + GH S+L +T D RNS + P +G
Sbjct: 220 W-MTDHTLKWEGVWRELGCLARSASFAVREESGHTLKSALSHTMVVDTRNSAILPRKGAL 278
Query: 311 FVSTTQIGG 319
++ G
Sbjct: 279 LRINQELAG 287
>UNIPROTKB|Q9Y512 [details] [associations]
symbol:SAMM50 "Sorting and assembly machinery component 50
homolog" species:9606 "Homo sapiens" [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006626 "protein targeting to mitochondrion"
evidence=TAS] [GO:0044267 "cellular protein metabolic process"
evidence=TAS] [GO:0016021 "integral to membrane" evidence=IDA]
[GO:0001401 "mitochondrial sorting and assembly machinery complex"
evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005741
"mitochondrial outer membrane" evidence=IDA] [GO:0045040 "protein
import into mitochondrial outer membrane" evidence=IDA]
Reactome:REACT_17015 InterPro:IPR000184 Pfam:PF01103 GO:GO:0016021
GO:GO:0005743 EMBL:CH471138 GO:GO:0044267 eggNOG:COG4775
GO:GO:0045040 GO:GO:0001401 EMBL:AL035398 CTD:25813 OMA:DTRNSSI
EMBL:AF151809 EMBL:AY189688 EMBL:AK001087 EMBL:CR456483
EMBL:AK222657 EMBL:BC007830 EMBL:BC011681 EMBL:BC015200
IPI:IPI00412713 RefSeq:NP_056195.3 UniGene:Hs.505824
ProteinModelPortal:Q9Y512 SMR:Q9Y512 IntAct:Q9Y512
MINT:MINT-1451034 STRING:Q9Y512 PhosphoSite:Q9Y512 DMDM:118572715
PaxDb:Q9Y512 PeptideAtlas:Q9Y512 PRIDE:Q9Y512 DNASU:25813
Ensembl:ENST00000350028 GeneID:25813 KEGG:hsa:25813 UCSC:uc003bej.3
GeneCards:GC22P044342 HGNC:HGNC:24276 HPA:HPA034537 MIM:612058
neXtProt:NX_Q9Y512 PharmGKB:PA142670954 HOVERGEN:HBG054614
OrthoDB:EOG4H72BD PhylomeDB:Q9Y512 ChiTaRS:SAMM50 GenomeRNAi:25813
NextBio:47039 ArrayExpress:Q9Y512 Bgee:Q9Y512 CleanEx:HS_SAMM50
Genevestigator:Q9Y512 GermOnline:ENSG00000100347 Uniprot:Q9Y512
Length = 469
Score = 182 (69.1 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 68/248 (27%), Positives = 109/248 (43%)
Query: 79 VHDVIVKGNTKTKDCLIEAELDAIRNATTMQEIIQAANIINYKLRELECFDSVEITLDS- 137
V V G +TKD +I E+ + A + E+++ ++ KL L F V++ +D+
Sbjct: 47 VQHVHFDGLGRTKDDIIICEIGDVFKAKNLIEVMRKSHEAREKLLRLGIFRQVDVLIDTC 106
Query: 138 -GPPELPGTSNVIIQVVETKTPLSGQIGTYTKGEAKSSTVEGSLKYKNGFGYGDLWDASL 196
G LP +V +V E + L+G T G + S V G LK N G +
Sbjct: 107 QGDDALPNGLDVTFEVTELRR-LTGSYNTMV-GNNEGSMVLG-LKLPNLLGRAEKVTFQF 163
Query: 197 AYGFDRSAEVSAGV--YLPRFKGLVTPMTARVFLQSQDWLKFSSYKEQSLGLSLGL-FSI 253
+YG + E S G+ + PR + ++ + + +SS +E G+S F I
Sbjct: 164 SYG---TKETSYGLSFFKPRPGNFERNFSVNLYKVTGQF-PWSSLRETDRGMSAEYSFPI 219
Query: 254 --RHHDLVYNLAWRTLTDPSHMSSNTVRRQLGHDFLSSLKYTFKFDKRNSPLRPTRGYAF 311
H + + WR L S +S VR++ GH SSL + D RNS + P RG
Sbjct: 220 WKTSHTVKWEGVWRELGCLSRTASFAVRKESGHSLKSSLSHAMVIDSRNSSILPRRGALL 279
Query: 312 VSTTQIGG 319
++ G
Sbjct: 280 KVNQELAG 287
>MGI|MGI:1915903 [details] [associations]
symbol:Samm50 "sorting and assembly machinery component 50
homolog (S. cerevisiae)" species:10090 "Mus musculus" [GO:0001401
"mitochondrial sorting and assembly machinery complex"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISO;IDA] [GO:0005741 "mitochondrial outer membrane"
evidence=ISO] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=ISO] [GO:0019867 "outer membrane"
evidence=IEA] [GO:0045040 "protein import into mitochondrial outer
membrane" evidence=ISO] InterPro:IPR000184 Pfam:PF01103
MGI:MGI:1915903 GO:GO:0016021 GO:GO:0005743 eggNOG:COG4775
GO:GO:0045040 GO:GO:0001401 CTD:25813 GeneTree:ENSGT00390000011355
OMA:DTRNSSI HOVERGEN:HBG054614 OrthoDB:EOG4H72BD EMBL:AK039949
EMBL:BC119180 EMBL:BC119178 EMBL:AK159740 EMBL:AK161378
EMBL:AK167806 EMBL:AK169351 EMBL:AK169066 EMBL:AK168510
EMBL:AK144975 EMBL:AK084395 EMBL:AK041783 IPI:IPI00221608
RefSeq:NP_848729.1 UniGene:Mm.290725 ProteinModelPortal:Q8BGH2
SMR:Q8BGH2 IntAct:Q8BGH2 STRING:Q8BGH2 PhosphoSite:Q8BGH2
REPRODUCTION-2DPAGE:Q8BGH2 PaxDb:Q8BGH2 PRIDE:Q8BGH2
Ensembl:ENSMUST00000023071 GeneID:68653 KEGG:mmu:68653
UCSC:uc007xbx.1 HOGENOM:HOG000015411 InParanoid:Q8BGH2
NextBio:327634 Bgee:Q8BGH2 Genevestigator:Q8BGH2 Uniprot:Q8BGH2
Length = 469
Score = 182 (69.1 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 67/248 (27%), Positives = 110/248 (44%)
Query: 79 VHDVIVKGNTKTKDCLIEAELDAIRNATTMQEIIQAANIINYKLRELECFDSVEITLDS- 137
V V G +TKD +I E+ + A + E+++ ++ KL L F V++ +D+
Sbjct: 47 VQHVHFDGLGRTKDDIIICEIGEVFKAKNLIEVMRRSHEAREKLLRLGIFRQVDVLIDTC 106
Query: 138 -GPPELPGTSNVIIQVVETKTPLSGQIGTYTKGEAKSSTVEGSLKYKNGFGYGDLWDASL 196
G LP +V +V E + L+G T G + S V G LK N G +
Sbjct: 107 HGEDALPNGLDVTFEVTELRR-LTGSYNTMV-GNNEGSMVLG-LKLPNLLGRAEKVTFQF 163
Query: 197 AYGFDRSAEVSAGV--YLPRFKGLVTPMTARVFLQSQDWLKFSSYKEQSLGLSLGL-FSI 253
+YG + E S G+ + P+ + ++ + + +SS +E G+S F +
Sbjct: 164 SYG---TKETSYGLSFFKPQPGNFERNFSVNLYKVTGQF-PWSSLRETDRGVSAEYSFPL 219
Query: 254 --RHHDLVYNLAWRTLTDPSHMSSNTVRRQLGHDFLSSLKYTFKFDKRNSPLRPTRGYAF 311
H + + WR L S +S VR++ GH SSL + D RNS + P RG F
Sbjct: 220 WKTSHTVKWEGVWRELGCLSRTASFAVRKESGHSLKSSLSHAMVIDSRNSSILPRRGALF 279
Query: 312 VSTTQIGG 319
++ G
Sbjct: 280 KVNQELAG 287
>UNIPROTKB|F6UPR4 [details] [associations]
symbol:SAMM50 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019867 "outer membrane" evidence=IEA]
InterPro:IPR000184 Pfam:PF01103 GO:GO:0019867
GeneTree:ENSGT00390000011355 EMBL:AAEX03007251 EMBL:AAEX03007252
Ensembl:ENSCAFT00000001384 Uniprot:F6UPR4
Length = 456
Score = 177 (67.4 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 67/248 (27%), Positives = 109/248 (43%)
Query: 79 VHDVIVKGNTKTKDCLIEAELDAIRNATTMQEIIQAANIINYKLRELECFDSVEITLDS- 137
V V G +TKD +I E+ + A + E+++ ++ KL L F V++ +D+
Sbjct: 47 VQHVHFDGLGRTKDDIIICEIGDVFKAKNLIEVMRKSHEAREKLLRLGIFRQVDVLIDTC 106
Query: 138 -GPPELPGTSNVIIQVVETKTPLSGQIGTYTKGEAKSSTVEGSLKYKNGFGYGDLWDASL 196
G LP +V +V E + L+G T G + S V G LK N G +
Sbjct: 107 QGDDALPNGLDVTFEVTELRR-LTGSYNTMV-GNNEGSMVLG-LKLPNLLGRAEKVTFQF 163
Query: 197 AYGFDRSAEVSAGV--YLPRFKGLVTPMTARVFLQSQDWLKFSSYKEQSLGLSLGL-FSI 253
+YG + E S G+ + P+ + ++ + + +SS +E G+S F I
Sbjct: 164 SYG---TKETSYGLSFFKPQPGNFERNFSVNLYKVTGQF-PWSSLRETDRGVSAEYSFPI 219
Query: 254 --RHHDLVYNLAWRTLTDPSHMSSNTVRRQLGHDFLSSLKYTFKFDKRNSPLRPTRGYAF 311
H + + WR L S +S VR++ GH SSL + D RNS + P RG
Sbjct: 220 WKTSHTVKWEGVWRELGCLSRTASFAVRKESGHSLKSSLSHAMVIDSRNSSILPRRGALL 279
Query: 312 VSTTQIGG 319
++ G
Sbjct: 280 KVNQELAG 287
>UNIPROTKB|E1C8A2 [details] [associations]
symbol:SAMM50 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0001401 "mitochondrial sorting and assembly
machinery complex" evidence=IEA] [GO:0005743 "mitochondrial inner
membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0045040 "protein import into mitochondrial outer
membrane" evidence=IEA] InterPro:IPR000184 Pfam:PF01103
GO:GO:0005743 GO:GO:0045040 GO:GO:0001401 CTD:25813
GeneTree:ENSGT00390000011355 OMA:DTRNSSI EMBL:AADN02006711
IPI:IPI00602465 RefSeq:XP_416458.2 UniGene:Gga.10268
ProteinModelPortal:E1C8A2 Ensembl:ENSGALT00000022959 GeneID:418234
KEGG:gga:418234 NextBio:20821433 Uniprot:E1C8A2
Length = 469
Score = 177 (67.4 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 65/248 (26%), Positives = 111/248 (44%)
Query: 79 VHDVIVKGNTKTKDCLIEAELDAIRNATTMQEIIQAANIINYKLRELECFDSVEITLDS- 137
V V G +T+D +I E+ + A + ++++ ++ KL L F VE+ +D+
Sbjct: 47 VQHVHFDGLGRTRDDIIMYEIADVFKAKNLIDVMRKSHEAREKLLRLGIFRQVEVLIDTC 106
Query: 138 -GPPELPGTSNVIIQVVETKTPLSGQIGTYTKGEAKSSTVEGSLKYKNGFGYGDLWDASL 196
G LP +V +V E + L+G T G + S V G LK+ N G +
Sbjct: 107 QGDDALPNGLDVTFEVTELRR-LTGSYNTMV-GNNEGSMVLG-LKFPNLLGRAEKVTFQF 163
Query: 197 AYGFDRSAEVSAGV--YLPRFKGLVTPMTARVFLQSQDWLKFSSYKEQSLGLSLGL-FSI 253
+YG + E S G+ + P+ + ++ + + +SS +E G+S F I
Sbjct: 164 SYG---TKETSYGLSFFKPQPGNFERNFSVNLYKVTGQF-PWSSLRETDRGISTEFNFPI 219
Query: 254 --RHHDLVYNLAWRTLTDPSHMSSNTVRRQLGHDFLSSLKYTFKFDKRNSPLRPTRGYAF 311
+H L + WR L + +S +VR + GH SS+ + D RNS + P RG
Sbjct: 220 WKTNHTLKWEGVWRELGCLARTASFSVREESGHSLKSSISHAMVIDSRNSSILPKRGALL 279
Query: 312 VSTTQIGG 319
++ G
Sbjct: 280 KINQELAG 287
>UNIPROTKB|E2QSZ0 [details] [associations]
symbol:SAMM50 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045040 "protein import into mitochondrial
outer membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0001401 "mitochondrial sorting and assembly
machinery complex" evidence=IEA] InterPro:IPR000184 Pfam:PF01103
GO:GO:0005743 GO:GO:0045040 GO:GO:0001401 CTD:25813
GeneTree:ENSGT00390000011355 EMBL:AAEX03007251 EMBL:AAEX03007252
RefSeq:XP_531702.3 Ensembl:ENSCAFT00000001384
Ensembl:ENSCAFT00000047071 GeneID:474473 KEGG:cfa:474473
NextBio:20850481 Uniprot:E2QSZ0
Length = 469
Score = 177 (67.4 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 67/248 (27%), Positives = 109/248 (43%)
Query: 79 VHDVIVKGNTKTKDCLIEAELDAIRNATTMQEIIQAANIINYKLRELECFDSVEITLDS- 137
V V G +TKD +I E+ + A + E+++ ++ KL L F V++ +D+
Sbjct: 47 VQHVHFDGLGRTKDDIIICEIGDVFKAKNLIEVMRKSHEAREKLLRLGIFRQVDVLIDTC 106
Query: 138 -GPPELPGTSNVIIQVVETKTPLSGQIGTYTKGEAKSSTVEGSLKYKNGFGYGDLWDASL 196
G LP +V +V E + L+G T G + S V G LK N G +
Sbjct: 107 QGDDALPNGLDVTFEVTELRR-LTGSYNTMV-GNNEGSMVLG-LKLPNLLGRAEKVTFQF 163
Query: 197 AYGFDRSAEVSAGV--YLPRFKGLVTPMTARVFLQSQDWLKFSSYKEQSLGLSLGL-FSI 253
+YG + E S G+ + P+ + ++ + + +SS +E G+S F I
Sbjct: 164 SYG---TKETSYGLSFFKPQPGNFERNFSVNLYKVTGQF-PWSSLRETDRGVSAEYSFPI 219
Query: 254 --RHHDLVYNLAWRTLTDPSHMSSNTVRRQLGHDFLSSLKYTFKFDKRNSPLRPTRGYAF 311
H + + WR L S +S VR++ GH SSL + D RNS + P RG
Sbjct: 220 WKTSHTVKWEGVWRELGCLSRTASFAVRKESGHSLKSSLSHAMVIDSRNSSILPRRGALL 279
Query: 312 VSTTQIGG 319
++ G
Sbjct: 280 KVNQELAG 287
>RGD|1303219 [details] [associations]
symbol:Samm50 "sorting and assembly machinery component 50
homolog (S. cerevisiae)" species:10116 "Rattus norvegicus"
[GO:0001401 "mitochondrial sorting and assembly machinery complex"
evidence=IEA;ISO] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0005741 "mitochondrial outer membrane" evidence=ISO]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA;ISO]
[GO:0016021 "integral to membrane" evidence=IEA;ISO] [GO:0045040
"protein import into mitochondrial outer membrane"
evidence=IEA;ISO] InterPro:IPR000184 Pfam:PF01103 RGD:1303219
GO:GO:0016021 GO:GO:0005743 eggNOG:COG4775 GO:GO:0045040
GO:GO:0001401 CTD:25813 GeneTree:ENSGT00390000011355
HOVERGEN:HBG054614 OrthoDB:EOG4H72BD HOGENOM:HOG000015411
EMBL:BC079302 IPI:IPI00372941 RefSeq:NP_001004241.1
UniGene:Rn.12611 ProteinModelPortal:Q6AXV4 STRING:Q6AXV4
PhosphoSite:Q6AXV4 PRIDE:Q6AXV4 DNASU:300111
Ensembl:ENSRNOT00000016520 GeneID:300111 KEGG:rno:300111
InParanoid:Q6AXV4 NextBio:646352 Genevestigator:Q6AXV4
Uniprot:Q6AXV4
Length = 469
Score = 174 (66.3 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 65/248 (26%), Positives = 109/248 (43%)
Query: 79 VHDVIVKGNTKTKDCLIEAELDAIRNATTMQEIIQAANIINYKLRELECFDSVEITLDS- 137
V V G +TKD +I E+ + A + E+++ ++ KL L F V++ +D+
Sbjct: 47 VQHVHFDGLERTKDDIIICEIGEVFKAKNLIEVMRRSHEAREKLLRLGIFRQVDVLIDTC 106
Query: 138 -GPPELPGTSNVIIQVVETKTPLSGQIGTYTKGEAKSSTVEGSLKYKNGFGYGDLWDASL 196
G LP +V +V E + L+G T G + S V G LK N G +
Sbjct: 107 HGEDALPNGLDVTFEVTELRR-LTGSYNTMV-GNNEGSMVLG-LKLPNLLGRAEKVTFQF 163
Query: 197 AYGFDRSAEVSAGV--YLPRFKGLVTPMTARVFLQSQDWLKFSSYKEQSLGLSLGL-FSI 253
+YG + E S G+ + P+ + ++ + + +SS +E G+S F +
Sbjct: 164 SYG---TKETSYGLSFFKPQPGNFEKNFSVNLYKVTGQF-PWSSLRETDRGVSAEYSFPL 219
Query: 254 --RHHDLVYNLAWRTLTDPSHMSSNTVRRQLGHDFLSSLKYTFKFDKRNSPLRPTRGYAF 311
H + + WR L + +S VR++ GH SSL + D RNS + P RG
Sbjct: 220 CKTSHTVKWEGVWRELGCLARTASFAVRKESGHSLKSSLSHAMVIDSRNSSILPRRGALL 279
Query: 312 VSTTQIGG 319
++ G
Sbjct: 280 KVNQELAG 287
>UNIPROTKB|G3MZZ3 [details] [associations]
symbol:SAMM50 "Sorting and assembly machinery component 50
homolog" species:9913 "Bos taurus" [GO:0045040 "protein import into
mitochondrial outer membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0005743 "mitochondrial inner
membrane" evidence=IEA] [GO:0001401 "mitochondrial sorting and
assembly machinery complex" evidence=IEA] InterPro:IPR000184
Pfam:PF01103 GO:GO:0005743 GO:GO:0045040 GO:GO:0001401
GeneTree:ENSGT00390000011355 OMA:DTRNSSI EMBL:DAAA02014865
EMBL:DAAA02014866 EMBL:DAAA02014867 Ensembl:ENSBTAT00000063243
Uniprot:G3MZZ3
Length = 469
Score = 172 (65.6 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 68/250 (27%), Positives = 109/250 (43%)
Query: 79 VHDVIVKGNTKTKDCLIEAELDAIRNATTMQEIIQAANIINYKLRELECFDSVEITLDS- 137
V V G +TKD +I E+ + A + E+++ ++ KL L F V++ +D+
Sbjct: 47 VQHVHFDGLGRTKDDIIMYEIRDVFKAKNLIEVMRKSHEAREKLLRLGIFRQVDVLIDTC 106
Query: 138 -GPPELPGTSNVIIQVVETKTPLSGQIGTYTKGEAKSSTVEGSLKYKNGFGYGDLWDASL 196
G LP +V +V E + L+G T G + S V G LK N G +
Sbjct: 107 QGDDALPNGLDVTFEVTELRR-LTGSYNTMV-GNNEGSMVLG-LKLPNLLGRAEKVTFQF 163
Query: 197 AYGFDRSAEVSAGV--YLPRFKGLVTPMTAR--VFLQSQDWLKFSSYKEQSLGLSLGL-F 251
+YG + E S G+ + P+ + ++ W SS QS+G+S F
Sbjct: 164 SYG---TKETSYGLSFFKPQPGNFDRNFSVNDHTIMEMFPW---SSLGGQSIGVSASTSF 217
Query: 252 SI--RHHDLVYNLAWRTLTDPSHMSSNTVRRQLGHDFLSSLKYTFKFDKRNSPLRPTRGY 309
H + + WR L S ++S VR++ GH SSL ++ D RNS + P RG
Sbjct: 218 PTWKTSHTVKWEGVWRELGCLSRVASFAVRKESGHSLKSSLSHSMVIDSRNSSILPKRGA 277
Query: 310 AFVSTTQIGG 319
++ G
Sbjct: 278 LLKVNQELAG 287
>UNIPROTKB|Q2HJ55 [details] [associations]
symbol:SAMM50 "Sorting and assembly machinery component 50
homolog" species:9913 "Bos taurus" [GO:0005741 "mitochondrial outer
membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR000184 Pfam:PF01103 GO:GO:0016021
GO:GO:0005741 EMBL:BT025460 EMBL:BC113305 IPI:IPI00705726
RefSeq:NP_001040088.1 UniGene:Bt.1696 ProteinModelPortal:Q2HJ55
DNASU:618777 GeneID:618777 KEGG:bta:618777 CTD:25813
NextBio:20901345 Uniprot:Q2HJ55
Length = 469
Score = 172 (65.6 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 66/248 (26%), Positives = 110/248 (44%)
Query: 79 VHDVIVKGNTKTKDCLIEAELDAIRNATTMQEIIQAANIINYKLRELECFDSVEITLDS- 137
V V G +TKD +I E+ + A + E+++ ++ KL L F V++ +D+
Sbjct: 47 VQHVHFDGLGRTKDDIIMYEIRDVFKAKNLIEVMRKSHEAREKLLRLGIFRQVDVLIDTC 106
Query: 138 -GPPELPGTSNVIIQVVETKTPLSGQIGTYTKGEAKSSTVEGSLKYKNGFGYGDLWDASL 196
G LP +V +V E + L+G T G + S V G LK N G +
Sbjct: 107 QGDDALPNGLDVTFEVTELRR-LTGSYNTMV-GNNEGSMVLG-LKLPNLLGRAEKVTFQF 163
Query: 197 AYGFDRSAEVSAGV--YLPRFKGLVTPMTARVFLQSQDWLKFSSYKEQSLGLSLGL-FSI 253
+YG + E S G+ + P+ + ++ + + +SS +E G+S F
Sbjct: 164 SYG---TKETSYGLSFFKPQPGNFDRNFSVNLYKVTGQF-PWSSLRETDRGVSAEYSFPT 219
Query: 254 --RHHDLVYNLAWRTLTDPSHMSSNTVRRQLGHDFLSSLKYTFKFDKRNSPLRPTRGYAF 311
H + + WR L S ++S VR++ GH SSL ++ D RNS + P RG
Sbjct: 220 WKTSHTVKWEGVWRELGCLSRVASFAVRKESGHSLKSSLSHSMVIDSRNSSILPKRGALL 279
Query: 312 VSTTQIGG 319
++ G
Sbjct: 280 KVNQELAG 287
>ZFIN|ZDB-GENE-040426-806 [details] [associations]
symbol:samm50 "sorting and assembly machinery
component 50 homolog (S. cerevisiae)" species:7955 "Danio rerio"
[GO:0019867 "outer membrane" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0005741 "mitochondrial outer
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR000184 Pfam:PF01103
ZFIN:ZDB-GENE-040426-806 GO:GO:0016021 GO:GO:0005741 eggNOG:COG4775
CTD:25813 OrthoDB:EOG4H72BD HOGENOM:HOG000015411 EMBL:BC044493
IPI:IPI00488752 RefSeq:NP_956436.1 UniGene:Dr.80333
ProteinModelPortal:Q803G5 STRING:Q803G5 PRIDE:Q803G5 GeneID:393111
KEGG:dre:393111 InParanoid:Q803G5 NextBio:20814184
ArrayExpress:Q803G5 Uniprot:Q803G5
Length = 469
Score = 164 (62.8 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 62/248 (25%), Positives = 111/248 (44%)
Query: 79 VHDVIVKGNTKTKDCLIEAELDAIRNATTMQEIIQAANIINYKLRELECFDSVEITLDS- 137
V V + G +TK+ ++ E+ + +A + ++++ ++ KL L F VE+ +D+
Sbjct: 47 VQHVHIDGLGRTKEDILTYEIADVFHAKNLIDVMKKSHEARQKLLRLGIFRHVEVVIDTA 106
Query: 138 -GPPELPGTSNVIIQVVETKTPLSGQIGTYTKGEAKSSTVEGSLKYKNGFGYGDLWDASL 196
G LP +V +V E + ++G T G + S V G +K N G +
Sbjct: 107 EGADALPNGLDVTFEVRELRR-MTGSYNTMV-GNNEGSMVLG-IKLPNVLGRAEKLTFQF 163
Query: 197 AYGFDRSAEVSAGV--YLPRFKGLVTPMTARVFLQSQDWLKFSSYKEQSLGLSLGL-FSI 253
+YG + E S G+ + P+ + ++ + + +SS +E G+S + F I
Sbjct: 164 SYG---TKETSYGLSFFKPQPGHFERNFSLNLYKVTGQF-PWSSLRETDRGVSAEISFPI 219
Query: 254 --RHHDLVYNLAWRTLTDPSHMSSNTVRRQLGHDFLSSLKYTFKFDKRNSPLRPTRGYAF 311
H L + WR L + +S VR + GH SSL + D RNS + P +G
Sbjct: 220 WRTSHTLKWEGVWRELGCLARTASFAVREESGHSLKSSLAHAMVIDTRNSTILPRKGALL 279
Query: 312 VSTTQIGG 319
++ G
Sbjct: 280 KINQELAG 287
>ASPGD|ASPL0000065328 [details] [associations]
symbol:AN10873 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0019867 "outer membrane"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR000184 Pfam:PF01103 EMBL:BN001304 GO:GO:0019867
EnsemblFungi:CADANIAT00000489 OMA:RNSAIFP Uniprot:C8VCB1
Length = 516
Score = 152 (58.6 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 68/269 (25%), Positives = 125/269 (46%)
Query: 71 RNGPVPLRVHDVIVKGNTKTKDCLIEAELDAI----RNAT-TMQEIIQAANIINYKLREL 125
+N +P + V V T+ +E L+ + R T T+ E ++ ++ KL
Sbjct: 53 QNSTLPCVISSVQVLNAKNTRRGFLEQILNPLLSQHRKQTYTLSEALREISVRADKLNRF 112
Query: 126 ECFDS-VEITLDSGPPE--LPGTSNVIIQV-VETKTPLSGQIGTYTKGEAKSSTVEGSLK 181
+ F V + LD P G +N+ + V+ K+ + + GT G A+ S G+L
Sbjct: 113 DIFQQPVSVYLDQTPASETQTGLTNISVYYSVKEKSRVLLKTGT-DLGNAEGSAY-GNLL 170
Query: 182 YKNGFGYGDLWDASLAYGF-DRSAEVSA---GVYL-PRFK---GLVTPMTARVFLQSQDW 233
++N FG + + + + G RSA +A ++ P F+ G + T + + ++
Sbjct: 171 WRNVFGGAENLNFNASLGTRTRSAYQAAFDTPIFSDPDFRLELGGIASSTQKTWASHEEV 230
Query: 234 LKFSSYKEQSLGLSLGLFSIRHHDLVYNLAWRTLTDPSHMSSNTVRRQLGHDFLSSLKYT 293
LK K + L S G + H++ Y+ WR +T + +S TVR G SS+ ++
Sbjct: 231 LKGGWSKLRWLSRS-G----QRHEIGYSGFWRQVTGLADNASPTVRANAGDSVKSSVFHS 285
Query: 294 FKFDKRNSPLRPTRGYAFVSTTQIGGLAP 322
+ D+R++P P+RGY + ++ G P
Sbjct: 286 WTTDRRDNPFLPSRGYYAKAFNELAGWGP 314
>POMBASE|SPAC17C9.06 [details] [associations]
symbol:sam50 "mitochondrial sorting and assembly
machinery complex subunit Sam50 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0001401 "mitochondrial sorting and
assembly machinery complex" evidence=ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0043623 "cellular protein complex assembly" evidence=ISO]
[GO:0045040 "protein import into mitochondrial outer membrane"
evidence=ISO] InterPro:IPR000184 Pfam:PF01103 PomBase:SPAC17C9.06
GO:GO:0016021 EMBL:CU329670 GO:GO:0043623 eggNOG:COG4775
GO:GO:0045040 GO:GO:0001401 OMA:DTRNSSI PIR:T11586
RefSeq:NP_594600.1 ProteinModelPortal:Q10478 STRING:Q10478
EnsemblFungi:SPAC17C9.06.1 GeneID:2542441 KEGG:spo:SPAC17C9.06
HOGENOM:HOG000170308 OrthoDB:EOG45XC52 NextBio:20803498
Uniprot:Q10478
Length = 475
Score = 148 (57.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 66/264 (25%), Positives = 112/264 (42%)
Query: 72 NGPVPLRVHDVIVKGNTKTKDCLIEAEL----DAIRNATTMQEIIQAANIINYKLRELEC 127
N +P+ + + V G T+ I L D + A + + +++ N I L
Sbjct: 39 NSTLPVGISSIRVTGAHHTRPSFIRKVLKTCLDTSKPAKS-RSLLETLNAIQETTGNLMA 97
Query: 128 FDSVE---ITLDSGPPELPGTSN--VIIQVVETKTPLSGQIGTYTKGEAKSSTVEGSLKY 182
F+ E I +D + G + V IQV E K L + GT G + + V ++
Sbjct: 98 FNVYETANIKIDRASSSVSGDDDLDVTIQVKE-KPRLYVETGTDV-GNVEGN-VHANVLA 154
Query: 183 KNGFGYGDLWDASLAYGFDRSAEVSAGVYLPRFKGLVTPMTARVFLQSQDWLKFSSYKEQ 242
+N FG +L +++YG + +S P T + +D SS+
Sbjct: 155 RNVFGGAELLSGNVSYGTRNRSTMSVNFETPVNADPKTRLRFNGHSNLRDNKSISSHDLL 214
Query: 243 SLGLSLGLFSIRHHDL-------VYNLAWRTLTDPSHMSSNTVRRQLGHDFLSSLKYTFK 295
+ G++L S++H DL NL WR +T + +S +VR + G SL YT+
Sbjct: 215 TKGITL---SLQHQDLWSGEHLLSQNLLWRQVTHLTEYASPSVRLEAGDSLKQSLSYTYT 271
Query: 296 FDKRNSPLRPTRGYAFVSTTQIGG 319
D R+ + PT+G T ++ G
Sbjct: 272 RDTRDHLMIPTKGDYVRQTLELAG 295
>UNIPROTKB|G4N9M6 [details] [associations]
symbol:MGG_09978 "Sorting assembly machinery 50 kDa
subunit" species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000184 Pfam:PF01103 GO:GO:0019867
EMBL:CM001234 RefSeq:XP_003717533.1 ProteinModelPortal:G4N9M6
EnsemblFungi:MGG_09978T0 GeneID:2680964 KEGG:mgr:MGG_09978
Uniprot:G4N9M6
Length = 518
Score = 143 (55.4 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 61/241 (25%), Positives = 106/241 (43%)
Query: 92 DCLIEAELDAIRNA-TTMQEIIQAANIINYKLRELECFDSV-EITLDSGPPELPGTS--- 146
D +++ +D NA TT+ +++ + KL + F EI L S P +
Sbjct: 74 DPIVKPLVDDENNAATTLGDVLGRLETVTTKLARFDLFKKEPEIWLSSAGESDPLAAVTD 133
Query: 147 -NVIIQVVETKTPLSGQIGTYTKGEAKSSTVEGSLKYKNGFGYGDLWDASLAYGFDRSAE 205
N+ I+V E + L + GT G+ + S G+L +N FG + + + G R+
Sbjct: 134 LNIDIKVTE-RGRLMLKTGT-DLGDTEGSAY-GNLLLRNVFGGAETLSLNASAG-TRTRS 189
Query: 206 VSAGVYLPRFKGLVTPMTARVFLQSQDWLKFSSYKE--QSLGLSLGLFSIRH--HDLVYN 261
+ V+ + L S ++S++E +S L L S H
Sbjct: 190 AYSAVFATPINSNPDYRFSLEALTSATEKPWASHEEVTKSATARLALVSASGDTHSFAAG 249
Query: 262 LAWRTLTDPSHMSSNTVRRQLGHDFLSSLKYTFKFDKRNSPLRPTRGYAFVSTTQIGGLA 321
AWR +T + +S +VR G +SL++ F D+R++PL P GY +T+++ G
Sbjct: 250 EAWRQVTGLAAKASPSVRTDAGDSVKTSLQHIFTRDRRDNPLMPQSGYLLRTTSELAGWG 309
Query: 322 P 322
P
Sbjct: 310 P 310
>FB|FBgn0033989 [details] [associations]
symbol:CG7639 species:7227 "Drosophila melanogaster"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0019867 "outer membrane"
evidence=IEA] InterPro:IPR000184 Pfam:PF01103 EMBL:AE013599
GO:GO:0016021 GO:GO:0005741 eggNOG:COG4775
GeneTree:ENSGT00390000011355 EMBL:AY071492 EMBL:AY094882
RefSeq:NP_995838.1 UniGene:Dm.19297 ProteinModelPortal:Q9V784
SMR:Q9V784 IntAct:Q9V784 STRING:Q9V784 PaxDb:Q9V784 PRIDE:Q9V784
EnsemblMetazoa:FBtr0087424 GeneID:36675 KEGG:dme:Dmel_CG7639
UCSC:CG7639-RB FlyBase:FBgn0033989 InParanoid:Q9V784 OMA:DTRNSSI
OrthoDB:EOG4Q2BXG PhylomeDB:Q9V784 GenomeRNAi:36675 NextBio:799806
Bgee:Q9V784 GermOnline:CG7639 Uniprot:Q9V784
Length = 443
Score = 127 (49.8 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 61/259 (23%), Positives = 110/259 (42%)
Query: 75 VPLRVHDVIVKGNTKTKDCLIEAELDAIRNATTMQEI-IQAANIINYKLRELECFDSVEI 133
+ RV V V G +T + + D + A+ Q++ ++A + +Y L EL F V +
Sbjct: 21 ISARVDRVNVSGLLRTHNDYVMRAADGLFKASNFQDLMLEAMSTKSY-LHELGIFKDVSV 79
Query: 134 TLD--SGPPELPGTSNVIIQVVETKTPLSGQIGTYTKGEAKSSTVEGSLKYKNGFGYGDL 191
+D G P V + E + G GT G+ + S + L N G G+
Sbjct: 80 HIDVSRGADASPQGYEVTFKGNEMSR-MMGSAGTEI-GQNEGS-LRTELTIPNILGRGEN 136
Query: 192 WDASLAYGFDRSAEVSAGVYLP----RFKGLVTPMTARVFLQSQDWLKFSSYKEQSLG-- 245
+Y R+ ++ + P RFK M+ +F Q+ D SS++ ++G
Sbjct: 137 ISLQGSYSSTRANDLQLKFWKPFFHTRFKENRPEMSFSIFRQT-DRFDISSFQTTNIGYL 195
Query: 246 LSLGLFSIRHHDLVYNLAWRT-LTDPSHMSSNT---VRRQLGHDFLSSLKYTFKFDKRNS 301
+ ++ DL ++L + + D ++ + +R G S L+Y+ +D R+
Sbjct: 196 VDFSAHTMVGVDLTHSLQYENAIRDVGLLNKSVPFAIRDHCGPKLASLLRYSVVYDNRDG 255
Query: 302 PLRPTRGYAFVSTTQIGGL 320
+ PTRG S + GL
Sbjct: 256 NVFPTRGIYLKSVNEYCGL 274
>UNIPROTKB|Q0C1B3 [details] [associations]
symbol:bamA "Outer membrane protein assembly factor BamA"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_01430 InterPro:IPR000184 InterPro:IPR010827
Pfam:PF01103 Pfam:PF07244 GO:GO:0016021 GO:GO:0005886 GO:GO:0009279
GO:GO:0051205 EMBL:CP000158 GenomeReviews:CP000158_GR
eggNOG:COG4775 KO:K07277 GO:GO:0043165 InterPro:IPR023707
PIRSF:PIRSF006076 TIGRFAMs:TIGR03303 RefSeq:YP_760480.1
ProteinModelPortal:Q0C1B3 STRING:Q0C1B3 GeneID:4288468
KEGG:hne:HNE_1776 PATRIC:32216379 HOGENOM:HOG000007232 OMA:IEPRITR
ProtClustDB:CLSK890668 BioCyc:HNEP228405:GI69-1804-MONOMER
Uniprot:Q0C1B3
Length = 854
Score = 89 (36.4 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 18/57 (31%), Positives = 30/57 (52%)
Query: 267 LTDPSHMSSNTVRRQLGHDFLSSLKYTFKFDKRNSPLRPTRGYAFVSTTQIGGLAPD 323
+ +P ++ NT+ R D S + Y F +D+ N P+ PTRG+ + + GL D
Sbjct: 596 ICNPGYVLRNTICRSERSDISSIVGYDFFWDQTNDPISPTRGFNLRFSQDLAGLGGD 652
Score = 86 (35.3 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 47/196 (23%), Positives = 82/196 (41%)
Query: 51 QPQRKSRVDRPKIENLFRRIRNGPVPLRVHDVIVKGNTKTKDCLIEAELDAIRNATTMQE 110
+PQ + +I+ F I GP + + + + GNT+T D +I EL +
Sbjct: 333 RPQISVNEETGRIDITFA-IDEGP-RVYIDRINIVGNTQTLDRVIRREL-RLSEGDAFNR 389
Query: 111 IIQAANIINYKLRELECFDSVEITLDSGPPELPGTSNVIIQVVETKT-PLSGQIGTYTKG 169
I+ + ++R L F+ VE+ P E P + V I+V E T LS G ++
Sbjct: 390 ILLDRS--RNRVRALGFFEDVEVV--ETPSEQPDRTIVDIKVKEQSTGELSFAAG-FSSV 444
Query: 170 EAKSSTVEGSLKYKNGFGYGDLWDASLAYGFDRSAEVSAGVYLPRFKGLVTPMTARVFLQ 229
+A + S + G G + SL+ R V PRF +F
Sbjct: 445 DAYLFDLSASQRNLRGRGQSVVARTSLS---SRQQIVDLRFTEPRFLDRNLSAGVDLFAT 501
Query: 230 SQDWLKFSSYKEQSLG 245
QD+ +++ + +++G
Sbjct: 502 RQDFEEYTGFTSETIG 517
>UNIPROTKB|Q5HX37 [details] [associations]
symbol:bamA "Outer membrane protein assembly factor BamA"
species:195099 "Campylobacter jejuni RM1221" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_01430 InterPro:IPR000184 InterPro:IPR010827
Pfam:PF01103 Pfam:PF07244 GO:GO:0016021 GO:GO:0005886 GO:GO:0009279
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0051205
eggNOG:COG4775 KO:K07277 GO:GO:0043165 InterPro:IPR023707
PIRSF:PIRSF006076 TIGRFAMs:TIGR03303 RefSeq:YP_178148.1
ProteinModelPortal:Q5HX37 STRING:Q5HX37 GeneID:3230887
KEGG:cjr:CJE0124 PATRIC:20041955 HOGENOM:HOG000104118 OMA:WKRSSIS
ProtClustDB:CLSK872407 BioCyc:CJEJ195099:GJC0-128-MONOMER
Uniprot:Q5HX37
Length = 739
Score = 125 (49.1 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 69/268 (25%), Positives = 122/268 (45%)
Query: 66 LFRRIRNGPVPLRVHDVIVKGNTKTKDCLIEAELDAIR-NATTMQEIIQAANIINYKLRE 124
+F+ I + V +R +VI+ GN++T D +I EL N ++ ++ N L+
Sbjct: 334 VFKVIPHDKVYIR--NVIISGNSRTVDRVIRRELYITEGNLYNRTDLSESKNA----LKR 387
Query: 125 LECFDSVEITLDSGPPELPGTS-NVIIQVVETKT-PLSGQIGTYTKGEAKSSTVEGSLKY 182
FD V I + ++ T ++I+ V E T +SG IG Y G + + SL
Sbjct: 388 TSYFDDVNIKEE----KVDNTHIDLIVDVKEASTGAISGGIG-Y--GSSDGILLNASLSD 440
Query: 183 KNGFGYGDLWDASLAYGFDRSAEVSAG-VYLPRFKGLVTPMTARVFLQSQDWLKFSSYKE 241
N FG G S+ D+S + +G + L + L + + L S D+ ++ +Y E
Sbjct: 441 TNIFGSGIKSSVSV----DKSDDTLSGRISLVNPRVLDSQYSLGGTLYSNDY-EWDNYSE 495
Query: 242 QSLG--LSLGLFSIRHHD--LVYNLAWRTLTDPSHMSSNTVRR--QLGHDFLSSLKYTFK 295
++ G +++G R+++ L YNL +D H+S +R +LG SS+
Sbjct: 496 KNYGFDITVGRQFARYYNVSLTYNLEQ---SDIYHLSPTLLRTGYELGKSIKSSITPAIT 552
Query: 296 FDKRNSPLRPTRGYAFVSTTQIGGLAPD 323
F+ + P G ++ + GL D
Sbjct: 553 FNNTDDYYLPRSGIIASTSLEYAGLGGD 580
>TIGR_CMR|CJE_0124 [details] [associations]
symbol:CJE_0124 "outer membrane protein, OMP85 family"
species:195099 "Campylobacter jejuni RM1221" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=ISS] HAMAP:MF_01430
InterPro:IPR000184 InterPro:IPR010827 Pfam:PF01103 Pfam:PF07244
GO:GO:0016021 GO:GO:0005886 GO:GO:0009279 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0051205 eggNOG:COG4775 KO:K07277
GO:GO:0043165 InterPro:IPR023707 PIRSF:PIRSF006076
TIGRFAMs:TIGR03303 RefSeq:YP_178148.1 ProteinModelPortal:Q5HX37
STRING:Q5HX37 GeneID:3230887 KEGG:cjr:CJE0124 PATRIC:20041955
HOGENOM:HOG000104118 OMA:WKRSSIS ProtClustDB:CLSK872407
BioCyc:CJEJ195099:GJC0-128-MONOMER Uniprot:Q5HX37
Length = 739
Score = 125 (49.1 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 69/268 (25%), Positives = 122/268 (45%)
Query: 66 LFRRIRNGPVPLRVHDVIVKGNTKTKDCLIEAELDAIR-NATTMQEIIQAANIINYKLRE 124
+F+ I + V +R +VI+ GN++T D +I EL N ++ ++ N L+
Sbjct: 334 VFKVIPHDKVYIR--NVIISGNSRTVDRVIRRELYITEGNLYNRTDLSESKNA----LKR 387
Query: 125 LECFDSVEITLDSGPPELPGTS-NVIIQVVETKT-PLSGQIGTYTKGEAKSSTVEGSLKY 182
FD V I + ++ T ++I+ V E T +SG IG Y G + + SL
Sbjct: 388 TSYFDDVNIKEE----KVDNTHIDLIVDVKEASTGAISGGIG-Y--GSSDGILLNASLSD 440
Query: 183 KNGFGYGDLWDASLAYGFDRSAEVSAG-VYLPRFKGLVTPMTARVFLQSQDWLKFSSYKE 241
N FG G S+ D+S + +G + L + L + + L S D+ ++ +Y E
Sbjct: 441 TNIFGSGIKSSVSV----DKSDDTLSGRISLVNPRVLDSQYSLGGTLYSNDY-EWDNYSE 495
Query: 242 QSLG--LSLGLFSIRHHD--LVYNLAWRTLTDPSHMSSNTVRR--QLGHDFLSSLKYTFK 295
++ G +++G R+++ L YNL +D H+S +R +LG SS+
Sbjct: 496 KNYGFDITVGRQFARYYNVSLTYNLEQ---SDIYHLSPTLLRTGYELGKSIKSSITPAIT 552
Query: 296 FDKRNSPLRPTRGYAFVSTTQIGGLAPD 323
F+ + P G ++ + GL D
Sbjct: 553 FNNTDDYYLPRSGIIASTSLEYAGLGGD 580
>WB|WBGene00001662 [details] [associations]
symbol:gop-3 species:6239 "Caenorhabditis elegans"
[GO:0019867 "outer membrane" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR000184 Pfam:PF01103 GO:GO:0016021 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0005741 GO:GO:0000003 EMBL:FO080774 eggNOG:COG4775
EMBL:AY052771 PIR:T15758 RefSeq:NP_498119.1 UniGene:Cel.19335
ProteinModelPortal:P46576 STRING:P46576 PaxDb:P46576
EnsemblMetazoa:C34E10.1.1 EnsemblMetazoa:C34E10.1.2
EnsemblMetazoa:C34E10.1.3 GeneID:175723 KEGG:cel:CELE_C34E10.1
UCSC:C34E10.1.2 CTD:175723 WormBase:C34E10.1
GeneTree:ENSGT00390000011355 HOGENOM:HOG000154249 InParanoid:P46576
OMA:DASFVKN NextBio:889368 Uniprot:P46576
Length = 434
Score = 119 (46.9 bits), Expect = 0.00020, P = 0.00020
Identities = 63/267 (23%), Positives = 114/267 (42%)
Query: 69 RIRNGPVPLRVHDVIVKGNTKTKDCLIEAELDAIRNATTMQEIIQAANIINYKLRELECF 128
R + VP V V G TK+ + E+ + + + E++ +++ L+E+
Sbjct: 13 RAKASGVPSIVEAVQFHGVRITKNDALVKEVSELYRSKNLDELVHNSHLAARHLQEVGLM 72
Query: 129 DSVEITLDSGPPELPG-TSNVIIQVVETKTPLSG-QIGTYTKGEAKSSTVEGSLKYKNGF 186
D+ +D+ P G N +++ E K+ +G + G T G+A S G K G
Sbjct: 73 DNAVALIDTSPSSNEGYVVNFLVR--EPKSFTAGVKAGVSTNGDADVSLNAG--KQSVG- 127
Query: 187 GYGDLWDASLAYGF--DRSAEVSAGVYLPRFKGL--VTPMTARVF--LQSQDWLKFSSYK 240
G G+ + Y D +SA + F G + ++A ++ L W + S
Sbjct: 128 GRGEAINTQYTYTVKGDHCFNISA---IKPFLGWQKYSNVSATLYRSLAHMPWNQ-SDVD 183
Query: 241 EQSLGLSLG--LFSIRH-HDLVYNLAWRTLTDPSHMSSNTVRRQLGHDFLSSLKYTFKFD 297
E + L+ L++ + H + N WRTL + ++ +VR Q GH SL+ D
Sbjct: 184 ENAAVLAYNGQLWNQKLLHQVKLNAIWRTLR-ATRDAAFSVREQAGHTLKFSLENAVAVD 242
Query: 298 KRNSPLRPTRGYAFVSTTQIGGLAPDS 324
R+ P+ +RG + G+ D+
Sbjct: 243 TRDRPILASRGILARFAQEYAGVFGDA 269
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.134 0.393 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 338 296 0.00093 115 3 11 22 0.42 34
33 0.44 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 20
No. of states in DFA: 611 (65 KB)
Total size of DFA: 204 KB (2114 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.14u 0.14s 24.28t Elapsed: 00:00:01
Total cpu time: 24.14u 0.14s 24.28t Elapsed: 00:00:01
Start: Mon May 20 18:38:14 2013 End: Mon May 20 18:38:15 2013