STRING 9.05 
  AT5G05520 protein (Arabidopsis thaliana) - STRING network view
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
AT5G05520
outer membrane OMP85 family protein; outer membrane OMP85 family protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- mitochondrion, plastid; EXPRESSED IN- 24 plant structures; EXPRESSED DURING- 14 growth stages; CONTAINS InterPro DOMAIN/s- Bacterial surface antigen (D15) (InterPro-IPR000184), Surface antigen variable number (InterPro-IPR010827); BEST Arabidopsis thaliana protein match is- outer membrane OMP85 family protein (TAIR-AT3G11070.1); Has 1168 Blast hits to 1166 proteins in 370 species- Archae - 0; Bacteria - 488; Metazoa - 1 [...] (524 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
AT2G19080
metaxin-related; metaxin-related; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- protei [...] (315 aa)
      0.933
AT3G11070
outer membrane OMP85 family protein; outer membrane OMP85 family protein; FUNCTIONS IN- molecul [...] (520 aa)
    0.904
DL4605C
unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unkn [...] (4218 aa)
       0.867
MIRO2
MIRO2 (MIRO-RELATED GTP-ASE 2); GTPase/ calcium ion binding; Encodes a calcium binding GTPases [...] (643 aa)
       0.786
MIRO1
MIRO1 (Miro-related GTP-ase 1); GTP binding; Encodes a protein with similarity to GTPases that [...] (648 aa)
      0.703
HKL1
HKL1 (HEXOKINASE-LIKE 1); ATP binding / fructokinase/ glucokinase/ hexokinase; HEXOKINASE-LIKE [...] (498 aa)
       0.659
BIGYIN
BIGYIN; binding; Encodes a protein with similarity to yeast FIS proteins. These membrane anchor [...] (170 aa)
       0.599
AT3G52730
ubiquinol-cytochrome C reductase UQCRX/QCR9-like family protein; ubiquinol-cytochrome C reducta [...] (72 aa)
       0.563
AT1G24267
unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (344 aa)
       0.563
AT5G55610
unknown protein; unknown protein; LOCATED IN- mitochondrion, chloroplast, plastid, membrane; EX [...] (329 aa)
      0.554
 
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Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
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