BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019623
(338 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FH92|IX15L_ARATH Protein IRX15-LIKE OS=Arabidopsis thaliana GN=IRX15-L PE=2 SV=1
Length = 317
Score = 332 bits (852), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 166/326 (50%), Positives = 223/326 (68%), Gaps = 23/326 (7%)
Query: 3 NNINTKLILLRPSTIHKPTTTTTTITTHRFYLLFFLTFFTLAFTLTFFTT------AINP 56
N NTKLIL+ P I K T+T +R +LL F++FFT+AF LT T + N
Sbjct: 5 GNTNTKLILVHP-YIQKQTST------NRLWLLAFVSFFTIAFLLTLLYTTDSIISSKNN 57
Query: 57 ASSVASTAKSLPSSSSSSSSIITA--ALLHYTLTSNST--MTSAELTAVADALSRCSPSC 112
+++V+S S ++++ S TA A+LHY SN + M+ E+ +++D L RCSP C
Sbjct: 58 SATVSSAVNSAVTTATISQLPTTAINAMLHYASRSNDSYHMSYGEMKSISDVLRRCSPPC 117
Query: 113 NFLVFGLTHETLLWKSLNFQGHTIFVDESEFLVQSFEKNHPDFEIYDVQYTTKVEEMNPT 172
N LVFGLTHETLLWKSLN G T+F++E+ + FE+ HP+ E++DVQYTTK E
Sbjct: 118 NLLVFGLTHETLLWKSLNHNGRTVFIEENRYYAAYFEEIHPEIEVFDVQYTTKAREAREL 177
Query: 173 LHAVRKQFKDDCRPMQNLLFSDCKLAINDMPNHVYDMDWDVVLVDGPSGYFPRAPGRMAP 232
+ AV++ +++CRP+QNLLFSDCKL +ND+PNHVYD+DWDV+LVDGP G PGRM+
Sbjct: 178 VSAVKEAARNECRPVQNLLFSDCKLGLNDLPNHVYDVDWDVILVDGPRGDGGDVPGRMSS 237
Query: 233 IFTASVLARSKKAGRKKTHVFVHDFNREVERVCSEEFLCEENLVEVVDKLAHFVVEPMAP 292
IFTA+VLARSKK G KTHVFVHD+ R+VER+C +EFLC ENLVE D LAH+V+E M
Sbjct: 238 IFTAAVLARSKKGGNPKTHVFVHDYYRDVERLCGDEFLCRENLVESNDLLAHYVLEKM-- 295
Query: 293 IEGNEEQSFKFCKSSSPSSSLSSPSS 318
++ S +FC+ S+SSPS+
Sbjct: 296 ----DKNSTQFCRGRKKKRSVSSPSA 317
>sp|Q9SNE5|IRX15_ARATH Protein IRREGULAR XYLEM 15 OS=Arabidopsis thaliana GN=IRX15 PE=2
SV=1
Length = 322
Score = 316 bits (809), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 166/330 (50%), Positives = 217/330 (65%), Gaps = 32/330 (9%)
Query: 1 MKN---NINTKLILLRPSTIHKPTTTTTTITTHRFYLLFFLTFFTLAFTLTFF------- 50
MKN N NTKLILL P I K T+TT R +LL F++FFT+ F LT
Sbjct: 1 MKNGSGNTNTKLILLHP-YIQKQTSTT------RLWLLAFVSFFTIVFLLTLLYTRDTIP 53
Query: 51 --TTAINPASSVASTAKSLPSSSS--SSSSIITAA---LLHYTLTSNST--MTSAELTAV 101
T++ A + T S PS+SS S+S++ T+A LLHY SN + M+ E+ ++
Sbjct: 54 SKNTSVAAAVAAVVTGGSTPSASSPISNSNLPTSAINALLHYASRSNDSFHMSYGEMKSI 113
Query: 102 ADALSRCSPSCNFLVFGLTHETLLWKSLNFQGHTIFVDESEFLVQSFEKNHPDFEIYDVQ 161
+D L RC+P CN LVFGLTHETLLWKSLN G T+F++E+ + FE+ HP+ +++DVQ
Sbjct: 114 SDVLRRCAPPCNLLVFGLTHETLLWKSLNHNGRTVFIEENRYYAAYFEEIHPEIDVFDVQ 173
Query: 162 YTTKVEEMNPTLHAVRKQFKDDCRPMQNLLFSDCKLAINDMPNHVYDMDWDVVLVDGPSG 221
YTTK E + A ++ ++CRP+QNLLFSDCKL +ND+PNHVYD+DWDV+ VDGP G
Sbjct: 174 YTTKAHEAGELVTAAKEAAGNECRPVQNLLFSDCKLGLNDLPNHVYDVDWDVIFVDGPRG 233
Query: 222 YFPRAPGRMAPIFTASVLARSKKAGRKKTHVFVHDFNREVERVCSEEFLCEENLVEVVDK 281
PGRM+ IFTA+VLARSKK G KTHVFVHD+ R+VER+C +EFLC ENLVE D
Sbjct: 234 DAHEGPGRMSSIFTAAVLARSKKGGTPKTHVFVHDYYRDVERLCGDEFLCRENLVESNDL 293
Query: 282 LAHFVVEPMAPIEGNEEQSFKFCKSSSPSS 311
LAH+V++ M ++ S KFC S
Sbjct: 294 LAHYVLDKM------DKNSTKFCNGRKKRS 317
>sp|Q6NMK1|GXM1_ARATH Glucuronoxylan 4-O-methyltransferase 1 OS=Arabidopsis thaliana
GN=GXM1 PE=1 SV=1
Length = 282
Score = 172 bits (436), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 93/275 (33%), Positives = 154/275 (56%), Gaps = 20/275 (7%)
Query: 34 LLFFLTFFTLAFTLTFFTTAINPASSVASTAKSLPSSSSSSSSIITAALLHYT---LTSN 90
+L F+ TL + T ++ + LP S + AL+HY+ +T
Sbjct: 23 ILIFIVRSTLTSSQEHQTPQETRSTRCSGACNKLPRS-------LAQALIHYSTSVITPQ 75
Query: 91 STMTSAELTAVADALSRCSPSCNFLVFGLTHETLLWKSLNFQGHTIFVDESEFLVQSFEK 150
T+ E+ + L + SP CNFLVFGL H++L+W SLN+ G T+F++E E ++ ++
Sbjct: 76 QTLK--EIAVSSRVLGKKSP-CNFLVFGLGHDSLMWSSLNYGGRTVFLEEDEAWIKQIKR 132
Query: 151 NHPDFEIYDVQYTTKVEEMNPTLHAVRKQFKDDCRPMQNLLFSDCKLAINDMPNHVYDMD 210
P E Y V Y +KV + + + + +C + + +S C+LA+ +P +Y+
Sbjct: 133 RFPMLESYHVTYDSKVNQADNLIEVGK---GPECTAIGDPRYSMCQLALKGLPAEIYETG 189
Query: 211 WDVVLVDGPSGYFPRAPGRMAPIFTASVLARSKKAGRKKTHVFVHDFNREVERVCSEEFL 270
WD+++VD P+GY+ APGRM I+TA ++AR++K G +T VFVHD NRE+E S+ FL
Sbjct: 190 WDLIMVDAPTGYYDEAPGRMTAIYTAGMMARNRKQG-GETDVFVHDVNREIEDKFSKAFL 248
Query: 271 CEENLVEVVDKLAHFVVEPMAPIEGNEEQSFK-FC 304
CE + + +L HF++ +G+E +S + FC
Sbjct: 249 CEGYMKKQEGRLRHFIIPSYR--DGSESESNRPFC 281
>sp|Q9T0F7|GXM2_ARATH Glucuronoxylan 4-O-methyltransferase 2 OS=Arabidopsis thaliana
GN=GXM2 PE=1 SV=1
Length = 290
Score = 165 bits (418), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 97/256 (37%), Positives = 141/256 (55%), Gaps = 8/256 (3%)
Query: 34 LLFFLTFFTLAFTLTFFTTAINPASSVASTAKSLPSSSSSSSSIITAALLHYTLTSNST- 92
L+ F+ F A + T I S S P + + ++ AL+HY +TS T
Sbjct: 21 LVLFILFLKRASFSSNSTATIRDEYHQKSKCPSTPQQCTKLPTSLSDALVHY-VTSEITP 79
Query: 93 -MTSAELTAVADALSRCSPSCNFLVFGLTHETLLWKSLNFQGHTIFVDESEFLVQSFEKN 151
T E++ L + SP CNFLVFGL H++L+W SLN G T+F++E E +++ K
Sbjct: 80 QQTFDEVSVSKRVLDKKSP-CNFLVFGLGHDSLMWASLNHGGRTLFLEEDEAWIETVTKK 138
Query: 152 HPDFEIYDVQYTTKVEEMNPTLHAVRKQFKDDCRPMQNLLFSDCKLAINDMPNHVYDMDW 211
P+ E Y V Y TKV++ N + R + DC+ + + S C L++ P VY+ W
Sbjct: 139 FPNLESYHVVYDTKVKDSNKLMELKRTE---DCKAVSDPRDSKCALSLKGFPADVYETQW 195
Query: 212 DVVLVDGPSGYFPRAPGRMAPIFTASVLARSKKAGRKKTHVFVHDFNREVERVCSEEFLC 271
DV++VD P+GY APGRM+ I+TA +LAR++ G +T VFVHD NR VE S FLC
Sbjct: 196 DVIMVDAPTGYHDEAPGRMSAIYTAGLLARNRYDG-GETDVFVHDINRPVEDEFSVAFLC 254
Query: 272 EENLVEVVDKLAHFVV 287
+ E +L HF +
Sbjct: 255 GGYMKEQQGRLRHFNI 270
>sp|Q9LQ32|GXM3_ARATH Glucuronoxylan 4-O-methyltransferase 3 OS=Arabidopsis thaliana
GN=GXM3 PE=1 SV=1
Length = 297
Score = 162 bits (411), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/227 (39%), Positives = 132/227 (58%), Gaps = 17/227 (7%)
Query: 78 ITAALLHYTLTSNST--MTSAELTAVADALSRCSPSCNFLVFGLTHETLLWKSLNFQGHT 135
++ AL+HY +TSN T T E++ L + SP CNFLVFGL H++L+W SLN G T
Sbjct: 73 LSDALVHY-VTSNVTPQQTFDEVSVSKRVLDKKSP-CNFLVFGLGHDSLMWASLNHGGRT 130
Query: 136 IFVDESEFLVQSFEKNHPDFEIYDVQYTTKVEEMNPTLHAVRKQFKDDCRPMQNLLFSDC 195
+F++E + + K P+ E Y V Y TKV++ + + R + +CR + + S C
Sbjct: 131 LFIEEDQAWIAIVTKKFPNLESYHVVYDTKVKDSDKLMELGRSE---ECRSVSDPRNSKC 187
Query: 196 KLAINDMPNHVYDMDWDVVLVDGPSGYFPRAPGRMAPIFTASVLARSKKAGRKKTHVFVH 255
LA+ D P Y+ WD+++VD P+GY APGRM+ I+TA +LAR+++ G +T VFVH
Sbjct: 188 DLALKDFPADFYETKWDLIMVDAPTGYHEEAPGRMSAIYTAGLLARNREDG--ETDVFVH 245
Query: 256 DFNREVERVCSEEFLCEENLVEVVDKLAHFVV--------EPMAPIE 294
D NR VE S FLC+ + E +L HF + P P+E
Sbjct: 246 DVNRPVEDEFSATFLCKGYMREQNGRLRHFTIPSHRARAGRPFCPVE 292
>sp|Q557G1|IRLB_DICDI Probable serine/threonine-protein kinase irlB OS=Dictyostelium
discoideum GN=irlB-1 PE=3 SV=1
Length = 1448
Score = 36.2 bits (82), Expect = 0.41, Method: Composition-based stats.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 13/138 (9%)
Query: 36 FFLTFFTLAFTLTFFTTAINPASSVASTAKSLPSSSSSSSSIITAALLHYTLTSNSTMTS 95
F + FF L +I+P+S K +S++S+ SI LL +T T+ S +
Sbjct: 255 FLIEFFKLDKVNNKLNFSIHPSSDANENYKRTKTSTNSNLSIDLVRLLEFTTTNFSINVA 314
Query: 96 AELTAVADALSRCSPSCNFLVFGL----------THETLLWKSLNFQGHTIFVDESEFLV 145
L + PS N L +G+ H +L S +F H I +D+ + +
Sbjct: 315 KLLISKFPTFITSIPSRNSL-WGIESRSSLNPIENHFRILNCSFDFNNHQIPIDKQKDYI 373
Query: 146 QSFEKN--HPDFEIYDVQ 161
F KN H + EI +++
Sbjct: 374 NLFTKNLIHFNTEINEIE 391
>sp|Q556K3|AOFB_DICDI Probable flavin-containing monoamine oxidase B OS=Dictyostelium
discoideum GN=maoB-1 PE=3 SV=1
Length = 471
Score = 35.4 bits (80), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 38/65 (58%), Gaps = 11/65 (16%)
Query: 131 FQGHTIFVDESEFLVQSFEKNHPDFEIYDVQYTTKVEEMNPTLHAVRKQFKDDCRPMQNL 190
+QG T+F + L++SF+++ P+F++ ++ + +NP + A+++ M+N+
Sbjct: 87 YQGKTVFDIYDDGLIKSFDESSPNFDLCEIG----LGNINPIIRAIKE-------VMKNI 135
Query: 191 LFSDC 195
FS C
Sbjct: 136 DFSKC 140
>sp|P35597|EXP7_STRPN Probable cation-transporting ATPase exp7 OS=Streptococcus
pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
GN=exp7 PE=3 SV=2
Length = 778
Score = 33.5 bits (75), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 74/184 (40%), Gaps = 29/184 (15%)
Query: 162 YTTKVEEMNPTLHAVRKQFKDDCR-PM-QNLLFSDCKLAINDMPNHVYDMDWDVVLVDGP 219
Y E+ NPT A+R++F D PM NL FS D W + ++G
Sbjct: 332 YMAHSEDKNPTAQAIRQRFVGDVAYPMISNLPFSS-------------DRKWGAMELEGL 378
Query: 220 SGYFPRAPGRMAPIFTASVLARSKKAGRKKTHVFVHDFNREV------ERVCSEEFLCEE 273
F AP + S + +++A + + V V ++E ++ + L
Sbjct: 379 GTVFLGAP----EMLLDSEVPEAREALERGSRVLVLALSQEKLDHHKPQKPSDIQALA-- 432
Query: 274 NLVEVVDKLAHFVVEPMAPIEGNEEQSFKFCKSSSPSSSLSSPSSSDDDDYHSLIEDGHH 333
L+E++D + E + + ++E K +P + S + DYHS ++
Sbjct: 433 -LLEILDPIREGAAETLDYLR-SQEVGLKIISGDNPVTVSSIAQKAGFADYHSYVDCSKI 490
Query: 334 GDDD 337
D++
Sbjct: 491 TDEE 494
>sp|Q5RBS5|BOREA_PONAB Borealin OS=Pongo abelii GN=CDCA8 PE=2 SV=1
Length = 280
Score = 33.1 bits (74), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 230 MAPIFTASVLARSKKAGRKKTHVFVHDFNREVERVCSEEFLCEENLVEVVDKLAHFVV 287
MAP +S +A++ R+K F+ DF+REVE + +NL++ VD L + +
Sbjct: 1 MAPRKGSSRVAKTNSLRRRKLASFLKDFDREVEIRIKQIESDRQNLLKEVDNLYNIEI 58
>sp|Q53HL2|BOREA_HUMAN Borealin OS=Homo sapiens GN=CDCA8 PE=1 SV=2
Length = 280
Score = 33.1 bits (74), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 230 MAPIFTASVLARSKKAGRKKTHVFVHDFNREVERVCSEEFLCEENLVEVVDKLAHFVV 287
MAP +S +A++ R+K F+ DF+REVE + +NL++ VD L + +
Sbjct: 1 MAPRKGSSRVAKTNSLRRRKLASFLKDFDREVEIRIKQIESDRQNLLKEVDNLYNIEI 58
>sp|O74778|BTB2_SCHPO BTB/POZ domain-containing protein 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=btb2 PE=1 SV=1
Length = 284
Score = 32.3 bits (72), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 111 SCNFLVFGLTHETLLWKSLNFQGHTIFVDESEFLVQSFEKNHPDFEIYDVQYTTKVEEMN 170
+ FL + TL+ K + H +F+ S L+Q +N+P DV YT +VE +
Sbjct: 28 NAGFLQGTFSDTTLIIKGETYHLHALFLGRSPVLLQKLIENNPK---GDVHYTIEVETED 84
Query: 171 P 171
P
Sbjct: 85 P 85
>sp|Q6H7U3|FH10_ORYSJ Formin-like protein 10 OS=Oryza sativa subsp. japonica GN=FH10 PE=2
SV=1
Length = 881
Score = 32.0 bits (71), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 282 LAHFVVEPMAPIEGNEEQSFKFCKSSSPSSSLSSPSSSDDDDYHSLIEDGHH 333
L HFVV+ + EG E SP PS+SDD+ SL EDG++
Sbjct: 661 LLHFVVQEIIRSEGVREARLAMENGRSPPF----PSTSDDNSNESLQEDGNY 708
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.131 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 123,559,528
Number of Sequences: 539616
Number of extensions: 4939096
Number of successful extensions: 26374
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 70
Number of HSP's that attempted gapping in prelim test: 25122
Number of HSP's gapped (non-prelim): 976
length of query: 338
length of database: 191,569,459
effective HSP length: 118
effective length of query: 220
effective length of database: 127,894,771
effective search space: 28136849620
effective search space used: 28136849620
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)