Query 019623
Match_columns 338
No_of_seqs 97 out of 99
Neff 3.1
Searched_HMMs 29240
Date Mon Mar 25 04:37:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019623.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019623hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3cvo_A Methyltransferase-like 97.0 0.0013 4.5E-08 58.5 7.2 162 93-290 16-185 (202)
2 3c6k_A Spermine synthase; sper 93.6 0.31 1E-05 47.6 9.7 148 109-289 204-376 (381)
3 2qfm_A Spermine synthase; sper 92.9 0.31 1.1E-05 47.2 8.6 84 109-220 187-277 (364)
4 3o4f_A Spermidine synthase; am 87.1 0.29 1E-05 45.9 2.6 49 104-153 78-128 (294)
5 1iy9_A Spermidine synthase; ro 83.9 5.8 0.0002 35.3 9.4 45 109-153 74-120 (275)
6 3gjy_A Spermidine synthase; AP 83.6 1.3 4.6E-05 41.6 5.4 44 111-154 90-135 (317)
7 2i7c_A Spermidine synthase; tr 83.0 4.1 0.00014 36.4 8.0 46 109-154 77-124 (283)
8 2b2c_A Spermidine synthase; be 81.3 4.1 0.00014 37.5 7.6 46 109-154 107-154 (314)
9 3u81_A Catechol O-methyltransf 79.0 5.5 0.00019 33.3 7.0 77 74-151 21-102 (221)
10 1mjf_A Spermidine synthase; sp 76.5 13 0.00044 33.0 9.1 44 109-152 74-118 (281)
11 1uir_A Polyamine aminopropyltr 75.2 8.1 0.00028 35.1 7.5 45 109-153 76-122 (314)
12 3adn_A Spermidine synthase; am 72.4 9.9 0.00034 34.5 7.4 45 109-153 82-128 (294)
13 2pt6_A Spermidine synthase; tr 71.5 10 0.00034 34.8 7.3 46 109-154 115-162 (321)
14 2o07_A Spermidine synthase; st 68.6 4.7 0.00016 36.7 4.3 45 109-153 94-140 (304)
15 2gpy_A O-methyltransferase; st 66.3 20 0.00067 29.9 7.5 76 75-151 19-97 (233)
16 3dr5_A Putative O-methyltransf 61.9 33 0.0011 29.3 8.2 76 75-151 18-100 (221)
17 3cbg_A O-methyltransferase; cy 61.3 32 0.0011 29.1 7.9 75 76-151 36-116 (232)
18 3c3p_A Methyltransferase; NP_9 61.2 21 0.0007 29.3 6.5 75 76-151 22-100 (210)
19 3c3y_A Pfomt, O-methyltransfer 61.2 27 0.00092 29.8 7.5 77 75-152 33-115 (237)
20 1sui_A Caffeoyl-COA O-methyltr 57.2 20 0.0007 31.0 6.1 76 76-152 43-124 (247)
21 1vl5_A Unknown conserved prote 53.6 15 0.00051 31.0 4.6 65 85-151 14-78 (260)
22 3duw_A OMT, O-methyltransferas 52.8 35 0.0012 28.0 6.6 74 77-151 23-102 (223)
23 2avd_A Catechol-O-methyltransf 52.7 63 0.0021 26.5 8.1 75 76-151 33-113 (229)
24 2hnk_A SAM-dependent O-methylt 52.5 46 0.0016 27.9 7.4 76 76-152 24-105 (239)
25 1u94_A RECA protein, recombina 52.2 25 0.00084 33.1 6.2 54 210-265 141-207 (356)
26 3ntv_A MW1564 protein; rossman 51.7 13 0.00044 31.5 3.8 73 78-151 39-114 (232)
27 2oyr_A UPF0341 protein YHIQ; a 48.4 23 0.00078 32.0 5.2 47 100-149 77-127 (258)
28 3hm2_A Precorrin-6Y C5,15-meth 47.5 40 0.0014 26.1 5.9 58 93-151 8-68 (178)
29 2cmg_A Spermidine synthase; tr 46.4 39 0.0013 30.0 6.4 46 109-154 71-116 (262)
30 3cgg_A SAM-dependent methyltra 46.4 54 0.0018 25.5 6.5 46 109-154 45-90 (195)
31 1l3i_A Precorrin-6Y methyltran 46.3 55 0.0019 25.3 6.5 58 93-151 16-74 (192)
32 3tr6_A O-methyltransferase; ce 45.2 48 0.0016 27.1 6.3 75 76-151 27-108 (225)
33 3pfg_A N-methyltransferase; N, 44.4 79 0.0027 26.5 7.6 61 95-155 34-95 (263)
34 3tfw_A Putative O-methyltransf 44.2 47 0.0016 28.5 6.3 74 77-151 28-107 (248)
35 3i9f_A Putative type 11 methyl 42.7 21 0.00072 27.8 3.6 53 100-153 8-60 (170)
36 3ou2_A SAM-dependent methyltra 40.7 80 0.0027 25.2 6.8 53 98-150 34-86 (218)
37 2p7i_A Hypothetical protein; p 39.5 1.2E+02 0.0041 24.5 7.8 57 97-153 29-85 (250)
38 3hnr_A Probable methyltransfer 38.9 83 0.0028 25.4 6.7 56 97-153 33-88 (220)
39 3sho_A Transcriptional regulat 38.6 1.5E+02 0.0052 23.8 12.1 83 93-178 24-112 (187)
40 3bxo_A N,N-dimethyltransferase 37.2 83 0.0028 25.6 6.5 59 96-154 25-84 (239)
41 3kjh_A CO dehydrogenase/acetyl 36.8 15 0.00053 30.1 2.0 17 208-224 129-145 (254)
42 3e8s_A Putative SAM dependent 36.5 1E+02 0.0036 24.5 6.9 52 99-151 42-93 (227)
43 3m33_A Uncharacterized protein 36.3 1.1E+02 0.0039 25.2 7.3 48 109-156 47-94 (226)
44 1g3q_A MIND ATPase, cell divis 36.2 15 0.0005 30.5 1.8 15 209-223 110-124 (237)
45 1byi_A Dethiobiotin synthase; 35.9 15 0.00051 30.3 1.8 14 210-223 108-121 (224)
46 3mb5_A SAM-dependent methyltra 35.5 64 0.0022 27.0 5.7 58 93-151 77-137 (255)
47 3e05_A Precorrin-6Y C5,15-meth 35.5 50 0.0017 26.8 4.8 58 93-151 23-83 (204)
48 3h2b_A SAM-dependent methyltra 34.3 91 0.0031 24.9 6.2 57 96-154 29-85 (203)
49 2ph1_A Nucleotide-binding prot 33.2 18 0.00061 31.2 1.9 15 209-223 127-141 (262)
50 1p91_A Ribosomal RNA large sub 32.6 1.1E+02 0.0036 25.8 6.6 55 100-154 73-131 (269)
51 3dtn_A Putative methyltransfer 31.0 67 0.0023 26.3 5.0 60 95-154 29-90 (234)
52 4dzz_A Plasmid partitioning pr 30.1 21 0.00072 28.7 1.7 13 210-222 75-87 (206)
53 2pwy_A TRNA (adenine-N(1)-)-me 29.9 90 0.0031 25.9 5.6 58 93-151 80-140 (258)
54 3ccf_A Cyclopropane-fatty-acyl 28.4 1.1E+02 0.0038 26.0 6.1 52 102-154 50-101 (279)
55 1inl_A Spermidine synthase; be 28.3 1.8E+02 0.0061 26.0 7.6 45 109-153 89-135 (296)
56 3r3h_A O-methyltransferase, SA 28.0 39 0.0013 29.2 3.1 75 76-151 24-104 (242)
57 2e7j_A SEP-tRNA:Cys-tRNA synth 27.3 1.8E+02 0.0061 25.0 7.2 14 73-86 20-33 (371)
58 1hyq_A MIND, cell division inh 27.1 26 0.00088 29.7 1.8 15 209-223 109-123 (263)
59 3bwc_A Spermidine synthase; SA 26.9 1.6E+02 0.0056 26.2 7.1 45 109-153 94-140 (304)
60 2yvl_A TRMI protein, hypotheti 26.9 1.1E+02 0.0038 25.1 5.6 58 93-151 75-132 (248)
61 2yxd_A Probable cobalt-precorr 26.7 2.1E+02 0.007 21.9 6.8 56 95-151 21-76 (183)
62 3ea0_A ATPase, para family; al 26.4 19 0.00066 29.9 0.9 15 210-224 118-132 (245)
63 1wzn_A SAM-dependent methyltra 26.0 1.5E+02 0.0052 24.5 6.3 58 94-151 23-82 (252)
64 2igt_A SAM dependent methyltra 26.0 1.4E+02 0.0049 27.3 6.7 54 99-152 142-195 (332)
65 1rjd_A PPM1P, carboxy methyl t 25.8 46 0.0016 31.0 3.4 42 103-145 91-133 (334)
66 3njr_A Precorrin-6Y methylase; 25.7 1.2E+02 0.0042 25.1 5.7 61 90-151 35-96 (204)
67 2oze_A ORF delta'; para, walke 25.7 24 0.00082 30.6 1.4 15 209-223 153-167 (298)
68 1wcv_1 SOJ, segregation protei 25.2 30 0.001 29.6 1.9 15 209-223 110-124 (257)
69 2woo_A ATPase GET3; tail-ancho 25.1 28 0.00095 31.7 1.8 34 110-143 17-58 (329)
70 1vbf_A 231AA long hypothetical 24.9 1.2E+02 0.0042 24.7 5.5 59 94-153 55-113 (231)
71 3q9l_A Septum site-determining 24.9 30 0.001 28.9 1.8 14 210-223 113-126 (260)
72 3jwg_A HEN1, methyltransferase 24.8 1.6E+02 0.0056 23.7 6.2 59 93-152 13-73 (219)
73 2p35_A Trans-aconitate 2-methy 24.7 93 0.0032 25.7 4.8 47 109-155 32-80 (259)
74 2xj4_A MIPZ; replication, cell 24.7 26 0.0009 30.7 1.5 15 209-223 102-116 (286)
75 2xhz_A KDSD, YRBH, arabinose 5 24.6 2.5E+02 0.0085 22.4 7.2 83 93-178 34-121 (183)
76 3cwq_A Para family chromosome 24.5 24 0.00081 29.7 1.1 15 209-223 66-81 (209)
77 3g5t_A Trans-aconitate 3-methy 24.5 2.2E+02 0.0076 24.5 7.3 57 93-151 21-80 (299)
78 3zrp_A Serine-pyruvate aminotr 24.5 2.7E+02 0.0093 23.8 7.8 106 70-178 9-125 (384)
79 2p8j_A S-adenosylmethionine-de 24.0 1.1E+02 0.0037 24.4 4.9 55 97-151 10-65 (209)
80 3ug7_A Arsenical pump-driving 24.0 30 0.001 31.8 1.8 35 109-143 23-65 (349)
81 3ez9_A Para; DNA binding, wing 23.9 25 0.00086 32.5 1.2 51 93-143 87-157 (403)
82 1o54_A SAM-dependent O-methylt 23.7 1.3E+02 0.0044 25.8 5.6 58 93-151 96-156 (277)
83 3io3_A DEHA2D07832P; chaperone 23.6 27 0.00092 32.7 1.4 34 110-143 16-59 (348)
84 3k9g_A PF-32 protein; ssgcid, 23.5 28 0.00096 29.7 1.4 15 209-223 143-157 (267)
85 2woj_A ATPase GET3; tail-ancho 23.5 24 0.00081 32.8 1.0 33 111-143 17-59 (354)
86 1y8c_A S-adenosylmethionine-de 23.5 2.1E+02 0.007 23.1 6.6 59 93-151 19-78 (246)
87 3e23_A Uncharacterized protein 23.4 1.3E+02 0.0044 24.2 5.3 54 98-151 31-84 (211)
88 2zr9_A Protein RECA, recombina 23.2 42 0.0014 31.2 2.6 62 211-274 140-224 (349)
89 1dus_A MJ0882; hypothetical pr 23.0 1.6E+02 0.0056 22.6 5.7 55 96-151 39-93 (194)
90 3ez2_A Plasmid partition prote 22.3 29 0.00098 32.0 1.3 51 93-143 84-154 (398)
91 1i9g_A Hypothetical protein RV 21.8 1.5E+02 0.0052 25.0 5.7 58 93-151 83-143 (280)
92 3jwh_A HEN1; methyltransferase 21.8 1.8E+02 0.0061 23.6 5.9 59 93-152 13-73 (217)
93 3lte_A Response regulator; str 21.3 63 0.0021 23.4 2.7 43 131-177 5-47 (132)
94 1xp8_A RECA protein, recombina 21.0 1.2E+02 0.0041 28.6 5.3 54 211-266 153-219 (366)
95 3bkw_A MLL3908 protein, S-aden 21.0 1.4E+02 0.0049 24.2 5.1 56 97-153 31-87 (243)
96 3hh2_A Growth/differentiation 20.3 21 0.00072 28.7 -0.1 38 181-224 3-40 (109)
No 1
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.03 E-value=0.0013 Score=58.54 Aligned_cols=162 Identities=23% Similarity=0.236 Sum_probs=92.7
Q ss_pred CCHHHHHHHHHHHhhcCCCccEEEecCCchhhhhhhccCCCcEEEecCChhHHHHhhhcCC--Cc-eeEEeEecccccch
Q 019623 93 MTSAELTAVADALSRCSPSCNFLVFGLTHETLLWKSLNFQGHTIFVDESEFLVQSFEKNHP--DF-EIYDVQYTTKVEEM 169 (338)
Q Consensus 93 qt~~Ei~~~~~vL~~~raPCNfLVFGLg~dsllW~aLN~gGrTVFLEEd~~~i~~~~~~~P--~l-eay~V~Y~T~v~ea 169 (338)
++.++.+.+...+++ |-|.|-+|-|. |-+|.|...+|+-+=+|-|++|++.+++..- ++ +...|.+.. .+|
T Consensus 16 v~~~~~~~L~~~l~~---a~~VLEiGtGy-STl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~--gda 89 (202)
T 3cvo_A 16 MPPAEAEALRMAYEE---AEVILEYGSGG-STVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVW--TDI 89 (202)
T ss_dssp SCHHHHHHHHHHHHH---CSEEEEESCSH-HHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEE--CCC
T ss_pred CCHHHHHHHHHHhhC---CCEEEEECchH-HHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEE--eCc
Confidence 889999999886654 78999999997 6666665558999999999999998875322 11 123343331 111
Q ss_pred HHHHHHHHhcCCCCCccccccccccccccccCCCcccc----cccccEEEEcCCCCCCCCCCCCchhHhhHHHHHhhccC
Q 019623 170 NPTLHAVRKQFKDDCRPMQNLLFSDCKLAINDMPNHVY----DMDWDVVLVDGPSGYFPRAPGRMAPIFTASVLARSKKA 245 (338)
Q Consensus 170 ~~LL~~~r~~~~~~C~p~~~l~~S~CkLAL~~LP~evY----e~~WDVImVDgP~Gy~peaPGRM~aIyTAavmARar~~ 245 (338)
.+.+ .-..|+....+ -.+..++..+. +-.+|+|+|||..+ ....+- .+-+-|.+
T Consensus 90 ~~~~--------~wg~p~~~~~~----~~l~~~~~~i~~~~~~~~fDlIfIDg~k~--------~~~~~~--~l~~l~~G 147 (202)
T 3cvo_A 90 GPTG--------DWGHPVSDAKW----RSYPDYPLAVWRTEGFRHPDVVLVDGRFR--------VGCALA--TAFSITRP 147 (202)
T ss_dssp SSBC--------GGGCBSSSTTG----GGTTHHHHGGGGCTTCCCCSEEEECSSSH--------HHHHHH--HHHHCSSC
T ss_pred hhhh--------cccccccchhh----hhHHHHhhhhhccccCCCCCEEEEeCCCc--------hhHHHH--HHHhcCCC
Confidence 1100 01222221110 01111111111 24599999999752 222222 33444444
Q ss_pred CCCcceEEEecC-ChhHHHHhhhhhccccccccccCceeeEEeCCC
Q 019623 246 GRKKTHVFVHDF-NREVERVCSEEFLCEENLVEVVDKLAHFVVEPM 290 (338)
Q Consensus 246 g~~~TdVfVHDv-dR~VE~~~s~EFLC~~nLve~~grL~HF~Ip~~ 290 (338)
| =++++|| .|.-+..- .+|| .+++..||+..|+|.+.
T Consensus 148 G----~Iv~DNv~~r~~y~~v-~~~~---~~~~~~~~~a~f~~~p~ 185 (202)
T 3cvo_A 148 V----TLLFDDYSQRRWQHQV-EEFL---GAPLMIGRLAAFQVEPQ 185 (202)
T ss_dssp E----EEEETTGGGCSSGGGG-HHHH---CCCEEETTEEEEEECCC
T ss_pred e----EEEEeCCcCCcchHHH-HHHH---hHHhhcCceEEEEeCCC
Confidence 3 4678885 55433222 3444 35678999999999554
No 2
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=93.63 E-value=0.31 Score=47.59 Aligned_cols=148 Identities=17% Similarity=0.162 Sum_probs=92.6
Q ss_pred CCCccEEEecCCchhhhhhhccCC-CcEEEecCChhHHHHhhhcCCCcee--EE----eEecccccchHHHHHHHHhcCC
Q 019623 109 SPSCNFLVFGLTHETLLWKSLNFQ-GHTIFVDESEFLVQSFEKNHPDFEI--YD----VQYTTKVEEMNPTLHAVRKQFK 181 (338)
Q Consensus 109 raPCNfLVFGLg~dsllW~aLN~g-GrTVFLEEd~~~i~~~~~~~P~lea--y~----V~Y~T~v~ea~~LL~~~r~~~~ 181 (338)
.+|-|.||.|+|--..+-..+.|. .+...+|=|+.-|+-.++-+|.+-. ++ =+.+.-+.+|.+-|+.+.++
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~-- 281 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKE-- 281 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHH--
T ss_pred CCCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhc--
Confidence 457899999999999888888764 4677899999999988887776421 11 12334457888888766542
Q ss_pred CCCccccccccccccccccCCCcccccccccEEEEcCCCCCCCCCCCCc-hhHhhHHHHHhh----ccCCCCcceEEE--
Q 019623 182 DDCRPMQNLLFSDCKLAINDMPNHVYDMDWDVVLVDGPSGYFPRAPGRM-APIFTASVLARS----KKAGRKKTHVFV-- 254 (338)
Q Consensus 182 ~~C~p~~~l~~S~CkLAL~~LP~evYe~~WDVImVDgP~Gy~peaPGRM-~aIyTAavmARa----r~~g~~~TdVfV-- 254 (338)
.-+||||++|.+.+.....|-.. ...||.-.+... +.+| |||
T Consensus 282 --------------------------~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~G-----Vlv~Q 330 (381)
T 3c6k_A 282 --------------------------GREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDG-----KYFTQ 330 (381)
T ss_dssp --------------------------TCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEE-----EEEEE
T ss_pred --------------------------cCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCC-----EEEEe
Confidence 12599999998875544455444 467887654433 2233 444
Q ss_pred ------ecCChhHHHHhhhhhcccc---cc--ccccCceeeEEeCC
Q 019623 255 ------HDFNREVERVCSEEFLCEE---NL--VEVVDKLAHFVVEP 289 (338)
Q Consensus 255 ------HDvdR~VE~~~s~EFLC~~---nL--ve~~grL~HF~Ip~ 289 (338)
++..+.+++.+.+.|---. +. |-+-+..|=|.+.+
T Consensus 331 ~~s~~~~~~~~~i~~tl~~vF~~v~~~~~~~~VPSy~~~W~F~~aS 376 (381)
T 3c6k_A 331 GNCVNLTEALSLYEEQLGRLYCPVEFSKEIVCVPSYLELWVFYTVW 376 (381)
T ss_dssp EEETTCHHHHHHHHHHHTTSSSCEEEEEEEECCGGGSSCEEEEEEE
T ss_pred cCCCcchhHHHHHHHHHHHhCCcceEeeEEEEecCCCCceeeeEEE
Confidence 5666677777777652111 11 22333467777743
No 3
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=92.94 E-value=0.31 Score=47.15 Aligned_cols=84 Identities=17% Similarity=0.244 Sum_probs=61.7
Q ss_pred CCCccEEEecCCchhhhhhhccCC-CcEEEecCChhHHHHhhhcCCCcee--EEe----EecccccchHHHHHHHHhcCC
Q 019623 109 SPSCNFLVFGLTHETLLWKSLNFQ-GHTIFVDESEFLVQSFEKNHPDFEI--YDV----QYTTKVEEMNPTLHAVRKQFK 181 (338)
Q Consensus 109 raPCNfLVFGLg~dsllW~aLN~g-GrTVFLEEd~~~i~~~~~~~P~lea--y~V----~Y~T~v~ea~~LL~~~r~~~~ 181 (338)
..|-+.||.|.|--...-..+.++ .+-+.+|=|+.-++.+++.+|.+.. ++- +.+-...+|.+.|+.+++.
T Consensus 187 p~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~-- 264 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKE-- 264 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHH--
T ss_pred CCCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhcc--
Confidence 358899999999988888888876 5678999999999999999886532 210 2344567888888755321
Q ss_pred CCCccccccccccccccccCCCcccccccccEEEEcCCC
Q 019623 182 DDCRPMQNLLFSDCKLAINDMPNHVYDMDWDVVLVDGPS 220 (338)
Q Consensus 182 ~~C~p~~~l~~S~CkLAL~~LP~evYe~~WDVImVDgP~ 220 (338)
+-.+|||++|.|.
T Consensus 265 --------------------------~~~fDvII~D~~d 277 (364)
T 2qfm_A 265 --------------------------GREFDYVINDLTA 277 (364)
T ss_dssp --------------------------TCCEEEEEEECCS
T ss_pred --------------------------CCCceEEEECCCC
Confidence 1258999999976
No 4
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=87.07 E-value=0.29 Score=45.92 Aligned_cols=49 Identities=14% Similarity=0.170 Sum_probs=40.0
Q ss_pred HHhhcCCCccEEEecCCchhhhhhhccCC--CcEEEecCChhHHHHhhhcCC
Q 019623 104 ALSRCSPSCNFLVFGLTHETLLWKSLNFQ--GHTIFVDESEFLVQSFEKNHP 153 (338)
Q Consensus 104 vL~~~raPCNfLVFGLg~dsllW~aLN~g--GrTVFLEEd~~~i~~~~~~~P 153 (338)
++.. ..|=|.||.|+|-...+-..+.|. -+.+.+|=|+.-|+-.++-+|
T Consensus 78 l~~~-p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp 128 (294)
T 3o4f_A 78 LLAH-GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLP 128 (294)
T ss_dssp HHHS-SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCH
T ss_pred HhhC-CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCc
Confidence 3444 779999999999999998888874 477889999999988776554
No 5
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=83.86 E-value=5.8 Score=35.33 Aligned_cols=45 Identities=18% Similarity=0.173 Sum_probs=37.3
Q ss_pred CCCccEEEecCCchhhhhhhccC--CCcEEEecCChhHHHHhhhcCC
Q 019623 109 SPSCNFLVFGLTHETLLWKSLNF--QGHTIFVDESEFLVQSFEKNHP 153 (338)
Q Consensus 109 raPCNfLVFGLg~dsllW~aLN~--gGrTVFLEEd~~~i~~~~~~~P 153 (338)
..|.++|+.|.|--.+.-..+.+ ..+-+.+|-|+.-++.+++..+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~ 120 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLP 120 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCH
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhH
Confidence 56899999999988877766666 3688999999999999887654
No 6
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=83.56 E-value=1.3 Score=41.60 Aligned_cols=44 Identities=11% Similarity=-0.085 Sum_probs=35.4
Q ss_pred CccEEEecCCchhhhhhhcc--CCCcEEEecCChhHHHHhhhcCCC
Q 019623 111 SCNFLVFGLTHETLLWKSLN--FQGHTIFVDESEFLVQSFEKNHPD 154 (338)
Q Consensus 111 PCNfLVFGLg~dsllW~aLN--~gGrTVFLEEd~~~i~~~~~~~P~ 154 (338)
|.+.|+.|.|--++.-..+. ++.+.+-+|=|+..++.+++.++.
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~ 135 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDI 135 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCC
T ss_pred CCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccc
Confidence 45999999998877655554 577888999999999999987764
No 7
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=82.99 E-value=4.1 Score=36.39 Aligned_cols=46 Identities=11% Similarity=0.112 Sum_probs=38.1
Q ss_pred CCCccEEEecCCchhhhhhhccC--CCcEEEecCChhHHHHhhhcCCC
Q 019623 109 SPSCNFLVFGLTHETLLWKSLNF--QGHTIFVDESEFLVQSFEKNHPD 154 (338)
Q Consensus 109 raPCNfLVFGLg~dsllW~aLN~--gGrTVFLEEd~~~i~~~~~~~P~ 154 (338)
..|-++|+.|.|.-.+.-..+.+ +++-+.+|=|+.-++.+++..+.
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~ 124 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKN 124 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTT
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHH
Confidence 57899999999988777766665 47899999999999998887664
No 8
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=81.27 E-value=4.1 Score=37.54 Aligned_cols=46 Identities=15% Similarity=0.220 Sum_probs=37.3
Q ss_pred CCCccEEEecCCchhhhhhhccC--CCcEEEecCChhHHHHhhhcCCC
Q 019623 109 SPSCNFLVFGLTHETLLWKSLNF--QGHTIFVDESEFLVQSFEKNHPD 154 (338)
Q Consensus 109 raPCNfLVFGLg~dsllW~aLN~--gGrTVFLEEd~~~i~~~~~~~P~ 154 (338)
..|-++|+.|.|.-...-..+.+ +++-+.+|=|+..++.+++..+.
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~ 154 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPG 154 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTT
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHH
Confidence 57899999999987665555544 57899999999999999987764
No 9
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=79.01 E-value=5.5 Score=33.26 Aligned_cols=77 Identities=8% Similarity=0.021 Sum_probs=56.0
Q ss_pred CcHHHHHHHHHhhccCCCC--CCHHHHHHHHHHHhhcCCCccEEEecCCc--hhhhhhh-ccCCCcEEEecCChhHHHHh
Q 019623 74 SSSIITAALLHYTLTSNST--MTSAELTAVADALSRCSPSCNFLVFGLTH--ETLLWKS-LNFQGHTIFVDESEFLVQSF 148 (338)
Q Consensus 74 lp~~v~~ALvHYAt~sn~t--qt~~Ei~~~~~vL~~~raPCNfLVFGLg~--dsllW~a-LN~gGrTVFLEEd~~~i~~~ 148 (338)
=|.+|++++-+|+...... .....-+.+..+++. ..|.++|=+|-|. -++.++. ++++++-+-+|-++..++.+
T Consensus 21 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a 99 (221)
T 3u81_A 21 DPQSVLEAIDTYCTQKEWAMNVGDAKGQIMDAVIRE-YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAIT 99 (221)
T ss_dssp CHHHHHHHHHHHHHHHTCGGGCCHHHHHHHHHHHHH-HCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHH
T ss_pred CHHHHHHHHHHHhhhcCcCcccCHHHHHHHHHHHHh-cCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHH
Confidence 4668999999999744433 555556666666665 6799999998755 4444443 45689999999999999887
Q ss_pred hhc
Q 019623 149 EKN 151 (338)
Q Consensus 149 ~~~ 151 (338)
+++
T Consensus 100 ~~~ 102 (221)
T 3u81_A 100 QQM 102 (221)
T ss_dssp HHH
T ss_pred HHH
Confidence 754
No 10
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=76.51 E-value=13 Score=33.04 Aligned_cols=44 Identities=16% Similarity=0.106 Sum_probs=35.8
Q ss_pred CCCccEEEecCCchhhhhhhccC-CCcEEEecCChhHHHHhhhcC
Q 019623 109 SPSCNFLVFGLTHETLLWKSLNF-QGHTIFVDESEFLVQSFEKNH 152 (338)
Q Consensus 109 raPCNfLVFGLg~dsllW~aLN~-gGrTVFLEEd~~~i~~~~~~~ 152 (338)
..|.++|+.|.|.-.+.-..+.+ .++-+.+|=|+..++.+++..
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~ 118 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI 118 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT
T ss_pred CCCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH
Confidence 57899999999988776665555 458899999999999888755
No 11
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=75.19 E-value=8.1 Score=35.06 Aligned_cols=45 Identities=20% Similarity=0.257 Sum_probs=36.5
Q ss_pred CCCccEEEecCCchhhhhhhccC--CCcEEEecCChhHHHHhhhcCC
Q 019623 109 SPSCNFLVFGLTHETLLWKSLNF--QGHTIFVDESEFLVQSFEKNHP 153 (338)
Q Consensus 109 raPCNfLVFGLg~dsllW~aLN~--gGrTVFLEEd~~~i~~~~~~~P 153 (338)
..|-++|+.|.|.-.+.-..+.+ +++-+.+|=|+..++.+++..+
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~ 122 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMP 122 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCH
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhH
Confidence 67899999999887776666655 5688999999999998887654
No 12
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=72.38 E-value=9.9 Score=34.54 Aligned_cols=45 Identities=13% Similarity=0.130 Sum_probs=35.5
Q ss_pred CCCccEEEecCCchhhhhhhccC--CCcEEEecCChhHHHHhhhcCC
Q 019623 109 SPSCNFLVFGLTHETLLWKSLNF--QGHTIFVDESEFLVQSFEKNHP 153 (338)
Q Consensus 109 raPCNfLVFGLg~dsllW~aLN~--gGrTVFLEEd~~~i~~~~~~~P 153 (338)
..|-++|+.|.|--.+.-..+.+ ..+-+.+|=|+.-++.+++..|
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~ 128 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLP 128 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCH
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhh
Confidence 67999999999988776666665 3567789999999988886543
No 13
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=71.50 E-value=10 Score=34.78 Aligned_cols=46 Identities=11% Similarity=0.112 Sum_probs=38.1
Q ss_pred CCCccEEEecCCchhhhhhhccC--CCcEEEecCChhHHHHhhhcCCC
Q 019623 109 SPSCNFLVFGLTHETLLWKSLNF--QGHTIFVDESEFLVQSFEKNHPD 154 (338)
Q Consensus 109 raPCNfLVFGLg~dsllW~aLN~--gGrTVFLEEd~~~i~~~~~~~P~ 154 (338)
..|.++|+.|.|.-.+.-..+.+ +++-+.+|=|+.-++.++++.+.
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~ 162 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKN 162 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTT
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHh
Confidence 67899999999988877666665 56888999999999998887664
No 14
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=68.60 E-value=4.7 Score=36.74 Aligned_cols=45 Identities=16% Similarity=0.162 Sum_probs=36.0
Q ss_pred CCCccEEEecCCchhhhhhhccC--CCcEEEecCChhHHHHhhhcCC
Q 019623 109 SPSCNFLVFGLTHETLLWKSLNF--QGHTIFVDESEFLVQSFEKNHP 153 (338)
Q Consensus 109 raPCNfLVFGLg~dsllW~aLN~--gGrTVFLEEd~~~i~~~~~~~P 153 (338)
..|-++|+.|.|.-.+.-..+.+ .++-+.+|-|+..++.+++..+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~ 140 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLP 140 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCH
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhH
Confidence 57889999999887666555554 4789999999999998887654
No 15
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=66.35 E-value=20 Score=29.92 Aligned_cols=76 Identities=8% Similarity=0.055 Sum_probs=53.4
Q ss_pred cHHHHHHHHHhhccCCCC-CCHHHHHHHHHHHhhcCCCccEEEecCCc--hhhhhhhccCCCcEEEecCChhHHHHhhhc
Q 019623 75 SSIITAALLHYTLTSNST-MTSAELTAVADALSRCSPSCNFLVFGLTH--ETLLWKSLNFQGHTIFVDESEFLVQSFEKN 151 (338)
Q Consensus 75 p~~v~~ALvHYAt~sn~t-qt~~Ei~~~~~vL~~~raPCNfLVFGLg~--dsllW~aLN~gGrTVFLEEd~~~i~~~~~~ 151 (338)
+.++++.+-+|+...... ........+...+.. +.+-++|.+|-|. -+..++...++++-+-+|-++..++.++++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~ 97 (233)
T 2gpy_A 19 RDQYIEQMEREAHEQQVPIMDLLGMESLLHLLKM-AAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKH 97 (233)
T ss_dssp CCHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHH-HCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCCCCcCHHHHHHHHHHHhc-cCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHH
Confidence 456788889998654555 444455556666654 6788999997754 445555555578889999999998887754
No 16
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=61.85 E-value=33 Score=29.25 Aligned_cols=76 Identities=5% Similarity=-0.112 Sum_probs=53.9
Q ss_pred cHHHHHHHHHhhccCCCC-CCHHHHHHHHHHHhhcCCCc---cEEEecCCch--hhhhhh-ccCCCcEEEecCChhHHHH
Q 019623 75 SSIITAALLHYTLTSNST-MTSAELTAVADALSRCSPSC---NFLVFGLTHE--TLLWKS-LNFQGHTIFVDESEFLVQS 147 (338)
Q Consensus 75 p~~v~~ALvHYAt~sn~t-qt~~Ei~~~~~vL~~~raPC---NfLVFGLg~d--sllW~a-LN~gGrTVFLEEd~~~i~~ 147 (338)
+.++++.+-.||...+.+ +....-..+..+++. ..|- ++|=.|-|.- ++.++. +.++|+-+-+|-|+.+++.
T Consensus 18 ~~~~l~~~~~~a~~~~~p~i~~~~~~~l~~l~~~-~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~ 96 (221)
T 3dr5_A 18 TDAAVARAREDAAEFGLPAPDEMTGQLLTTLAAT-TNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQ 96 (221)
T ss_dssp CCHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHH-SCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHH
T ss_pred CCHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHh-hCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHH
Confidence 467888999999866666 555555555555544 5666 8999988765 333333 4568999999999999988
Q ss_pred hhhc
Q 019623 148 FEKN 151 (338)
Q Consensus 148 ~~~~ 151 (338)
++++
T Consensus 97 a~~~ 100 (221)
T 3dr5_A 97 AKAL 100 (221)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8754
No 17
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=61.30 E-value=32 Score=29.13 Aligned_cols=75 Identities=16% Similarity=0.068 Sum_probs=52.1
Q ss_pred HHHHHHHHHhhccCCCC---CCHHHHHHHHHHHhhcCCCccEEEecCCch--hhhhhhcc-CCCcEEEecCChhHHHHhh
Q 019623 76 SIITAALLHYTLTSNST---MTSAELTAVADALSRCSPSCNFLVFGLTHE--TLLWKSLN-FQGHTIFVDESEFLVQSFE 149 (338)
Q Consensus 76 ~~v~~ALvHYAt~sn~t---qt~~Ei~~~~~vL~~~raPCNfLVFGLg~d--sllW~aLN-~gGrTVFLEEd~~~i~~~~ 149 (338)
.+++.++-+++...+.+ ....+.+.+..+++. ..|-++|-+|-|.- ++.++... .+|+-+.+|-++.+++.++
T Consensus 36 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~ 114 (232)
T 3cbg_A 36 SFYLAQLRRETAHLPGAPMQISPEQAQFLGLLISL-TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAK 114 (232)
T ss_dssp CHHHHHHHHHTTTSTTGGGSCCHHHHHHHHHHHHH-HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCCCccCcCHHHHHHHHHHHHh-cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence 46788888888644444 355556666665554 67889999987654 34444333 3789999999999998887
Q ss_pred hc
Q 019623 150 KN 151 (338)
Q Consensus 150 ~~ 151 (338)
+.
T Consensus 115 ~~ 116 (232)
T 3cbg_A 115 KY 116 (232)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 18
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=61.19 E-value=21 Score=29.30 Aligned_cols=75 Identities=9% Similarity=-0.024 Sum_probs=50.3
Q ss_pred HHHHHHHHHhhccCCCC-CCHHHHHHHHHHHhhcCCCccEEEecCCch--hhhhhhccC-CCcEEEecCChhHHHHhhhc
Q 019623 76 SIITAALLHYTLTSNST-MTSAELTAVADALSRCSPSCNFLVFGLTHE--TLLWKSLNF-QGHTIFVDESEFLVQSFEKN 151 (338)
Q Consensus 76 ~~v~~ALvHYAt~sn~t-qt~~Ei~~~~~vL~~~raPCNfLVFGLg~d--sllW~aLN~-gGrTVFLEEd~~~i~~~~~~ 151 (338)
.++++.+-.|+.....+ ........+..+++. ..|.++|-.|-|.- +..++...+ +++-+-+|-++..++.++++
T Consensus 22 ~~~~~~~~~~~~~~~~p~~~~~~~~~l~~l~~~-~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~ 100 (210)
T 3c3p_A 22 DPVVAAMEQIARERNIPIVDRQTGRLLYLLARI-KQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRM 100 (210)
T ss_dssp CHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHH-HCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCCCCcCHHHHHHHHHHHHh-hCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHH
Confidence 46788888888755555 444444444444443 67889999987654 344444434 78888999999998877754
No 19
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=61.18 E-value=27 Score=29.84 Aligned_cols=77 Identities=9% Similarity=-0.108 Sum_probs=52.3
Q ss_pred cHHHHHHHHHhhccCCCC---CCHHHHHHHHHHHhhcCCCccEEEecCCch--hhhhhhc-cCCCcEEEecCChhHHHHh
Q 019623 75 SSIITAALLHYTLTSNST---MTSAELTAVADALSRCSPSCNFLVFGLTHE--TLLWKSL-NFQGHTIFVDESEFLVQSF 148 (338)
Q Consensus 75 p~~v~~ALvHYAt~sn~t---qt~~Ei~~~~~vL~~~raPCNfLVFGLg~d--sllW~aL-N~gGrTVFLEEd~~~i~~~ 148 (338)
+.+++.++-.|+.....+ .+......+..+++. ..|-++|-.|-|.- ++.++.. ..+|+-+-+|-|+.+++.+
T Consensus 33 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a 111 (237)
T 3c3y_A 33 EAGFLKELREANESHPDSYMSTSPLAGQLMSFVLKL-VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIG 111 (237)
T ss_dssp SCHHHHHHHHHHTTSTTGGGSCCHHHHHHHHHHHHH-TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHH
T ss_pred CCHHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHh-hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHH
Confidence 346788888898643332 345555555555554 77899999987553 3444433 3389999999999999988
Q ss_pred hhcC
Q 019623 149 EKNH 152 (338)
Q Consensus 149 ~~~~ 152 (338)
+++.
T Consensus 112 ~~~~ 115 (237)
T 3c3y_A 112 LPFI 115 (237)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7653
No 20
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=57.21 E-value=20 Score=31.05 Aligned_cols=76 Identities=12% Similarity=-0.095 Sum_probs=50.6
Q ss_pred HHHHHHHHHhhccCCCC--C-CHHHHHHHHHHHhhcCCCccEEEecCCch--hhhhhhccC-CCcEEEecCChhHHHHhh
Q 019623 76 SIITAALLHYTLTSNST--M-TSAELTAVADALSRCSPSCNFLVFGLTHE--TLLWKSLNF-QGHTIFVDESEFLVQSFE 149 (338)
Q Consensus 76 ~~v~~ALvHYAt~sn~t--q-t~~Ei~~~~~vL~~~raPCNfLVFGLg~d--sllW~aLN~-gGrTVFLEEd~~~i~~~~ 149 (338)
.++++++.+||...... + ....-..+..+++. ..|-++|-.|-|.- ++.++...+ +|+-+-+|-|+.+++.++
T Consensus 43 ~~~l~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~-~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~ 121 (247)
T 1sui_A 43 HEAMKELREVTAKHPWNIMTTSADEGQFLSMLLKL-INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGL 121 (247)
T ss_dssp TTHHHHHHHHHHTSTTGGGSCCHHHHHHHHHHHHH-TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHH
T ss_pred CHHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHh-hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence 35788888998643322 3 34444444455554 77899999988654 333333323 899999999999999887
Q ss_pred hcC
Q 019623 150 KNH 152 (338)
Q Consensus 150 ~~~ 152 (338)
++.
T Consensus 122 ~~~ 124 (247)
T 1sui_A 122 PVI 124 (247)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
No 21
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=53.61 E-value=15 Score=31.01 Aligned_cols=65 Identities=11% Similarity=0.043 Sum_probs=45.5
Q ss_pred hhccCCCCCCHHHHHHHHHHHhhcCCCccEEEecCCchhhhhhhccCCCcEEEecCChhHHHHhhhc
Q 019623 85 YTLTSNSTMTSAELTAVADALSRCSPSCNFLVFGLTHETLLWKSLNFQGHTIFVDESEFLVQSFEKN 151 (338)
Q Consensus 85 YAt~sn~tqt~~Ei~~~~~vL~~~raPCNfLVFGLg~dsllW~aLN~gGrTVFLEEd~~~i~~~~~~ 151 (338)
|.+ |....+..++..+.+.+.. +.+-++|-+|-|...+.......+++-+-+|-++..++.++++
T Consensus 14 ~~~-s~~~~~~~~~~~l~~~l~~-~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~ 78 (260)
T 1vl5_A 14 YVT-SQIHAKGSDLAKLMQIAAL-KGNEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVARAF 78 (260)
T ss_dssp ----------CCCHHHHHHHHTC-CSCCEEEEETCTTCHHHHHHGGGSSEEEEEESCHHHHHHHHHH
T ss_pred eec-CccccCHHHHHHHHHHhCC-CCCCEEEEEeCCCCHHHHHHHHhCCEEEEEeCCHHHHHHHHHH
Confidence 554 3333566677788888865 7889999999988777766667778999999999998877654
No 22
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=52.82 E-value=35 Score=27.98 Aligned_cols=74 Identities=14% Similarity=0.052 Sum_probs=49.2
Q ss_pred HHHHHHHHhhccCCCC-C--CHHHHHHHHHHHhhcCCCccEEEecCCch--hhhhhhccC-CCcEEEecCChhHHHHhhh
Q 019623 77 IITAALLHYTLTSNST-M--TSAELTAVADALSRCSPSCNFLVFGLTHE--TLLWKSLNF-QGHTIFVDESEFLVQSFEK 150 (338)
Q Consensus 77 ~v~~ALvHYAt~sn~t-q--t~~Ei~~~~~vL~~~raPCNfLVFGLg~d--sllW~aLN~-gGrTVFLEEd~~~i~~~~~ 150 (338)
++++.+..++.....+ + +...-..+..+++. ..|.++|-.|-|.- +..++...+ +|+-+-+|-++..++.+++
T Consensus 23 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~ 101 (223)
T 3duw_A 23 STLEEVLQVNAAANLPAHDVSPTQGKFLQLLVQI-QGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARS 101 (223)
T ss_dssp HHHHHHHHHHHHTTCCSCSCCHHHHHHHHHHHHH-HTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCCCcccCHHHHHHHHHHHHh-hCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH
Confidence 5677777887644444 2 34444444444444 67899999987654 444444444 7888899999999988775
Q ss_pred c
Q 019623 151 N 151 (338)
Q Consensus 151 ~ 151 (338)
+
T Consensus 102 ~ 102 (223)
T 3duw_A 102 N 102 (223)
T ss_dssp H
T ss_pred H
Confidence 4
No 23
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=52.71 E-value=63 Score=26.48 Aligned_cols=75 Identities=13% Similarity=-0.008 Sum_probs=51.8
Q ss_pred HHHHHHHHHhhccCCC--C-CCHHHHHHHHHHHhhcCCCccEEEecCCch--hhhhhhccC-CCcEEEecCChhHHHHhh
Q 019623 76 SIITAALLHYTLTSNS--T-MTSAELTAVADALSRCSPSCNFLVFGLTHE--TLLWKSLNF-QGHTIFVDESEFLVQSFE 149 (338)
Q Consensus 76 ~~v~~ALvHYAt~sn~--t-qt~~Ei~~~~~vL~~~raPCNfLVFGLg~d--sllW~aLN~-gGrTVFLEEd~~~i~~~~ 149 (338)
.++++++-.++...+. . .+......+..+++. ..+.++|-+|-|.- ++.++...+ +++-+-+|-++..++.++
T Consensus 33 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~ 111 (229)
T 2avd_A 33 HPALRSLRLLTLEQPQGDSMMTCEQAQLLANLARL-IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGR 111 (229)
T ss_dssp CHHHHHHHHHHHTSTTGGGSCCHHHHHHHHHHHHH-TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHH
T ss_pred CHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHh-cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence 4678888888864212 2 566666666666654 78999999987654 444444333 788999999999998887
Q ss_pred hc
Q 019623 150 KN 151 (338)
Q Consensus 150 ~~ 151 (338)
++
T Consensus 112 ~~ 113 (229)
T 2avd_A 112 PL 113 (229)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 24
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=52.54 E-value=46 Score=27.94 Aligned_cols=76 Identities=17% Similarity=0.006 Sum_probs=52.2
Q ss_pred HHHHHHHHHhhccCCCC---CCHHHHHHHHHHHhhcCCCccEEEecCC--chhhhhhhccC-CCcEEEecCChhHHHHhh
Q 019623 76 SIITAALLHYTLTSNST---MTSAELTAVADALSRCSPSCNFLVFGLT--HETLLWKSLNF-QGHTIFVDESEFLVQSFE 149 (338)
Q Consensus 76 ~~v~~ALvHYAt~sn~t---qt~~Ei~~~~~vL~~~raPCNfLVFGLg--~dsllW~aLN~-gGrTVFLEEd~~~i~~~~ 149 (338)
..+++.+-.++.....+ ........+...+.. ..+.++|.+|-| ..+..++...+ +++-+-+|-++..++.++
T Consensus 24 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~ 102 (239)
T 2hnk_A 24 PDSFLKLRKETGTLAQANMQISPEEGQFLNILTKI-SGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVAR 102 (239)
T ss_dssp CHHHHHHHHHHHTC---CCSCCHHHHHHHHHHHHH-HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCCcccccCHHHHHHHHHHHHh-hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence 35677788888643333 455556666666654 678999999775 44555555544 789999999999998887
Q ss_pred hcC
Q 019623 150 KNH 152 (338)
Q Consensus 150 ~~~ 152 (338)
++.
T Consensus 103 ~~~ 105 (239)
T 2hnk_A 103 KYW 105 (239)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
No 25
>1u94_A RECA protein, recombinase A; homologous recombination, ATPase, DNA repair, DNA binding protein; 1.90A {Escherichia coli} SCOP: c.37.1.11 d.48.1.1 PDB: 1u98_A 1u99_A 1xms_A* 1xmv_A* 2rec_A 2reb_A 1n03_A* 1rea_A 1aa3_A
Probab=52.25 E-value=25 Score=33.09 Aligned_cols=54 Identities=15% Similarity=0.292 Sum_probs=24.8
Q ss_pred cccEEEEcCCCCCCC--CCCCCchhH-----------hhHHHHHhhccCCCCcceEEEecCChhHHHHh
Q 019623 210 DWDVVLVDGPSGYFP--RAPGRMAPI-----------FTASVLARSKKAGRKKTHVFVHDFNREVERVC 265 (338)
Q Consensus 210 ~WDVImVDgP~Gy~p--eaPGRM~aI-----------yTAavmARar~~g~~~TdVfVHDvdR~VE~~~ 265 (338)
.-|+|+||.+.-..+ +-.|+|+.. +.-.+..-.++. +.|=||+..+.+.++..|
T Consensus 141 ~~~lVVIDsl~~l~~~~e~~~~~g~~~~~~q~r~~~~~l~~L~~~a~~~--~~~VI~~nq~~~~~~~~f 207 (356)
T 1u94_A 141 AVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLKQS--NTLLIFINQIRMKIGVMF 207 (356)
T ss_dssp CCSEEEEECGGGCCCHHHHTTC------CHHHHHHHHHHHHHHHHHHHH--TCEEEEEEC---------
T ss_pred CCCEEEEcCHHHhcchhhhccccccchhHHHHHHHHHHHHHHHHHHHHh--CCEEEEEeccccccCccc
Confidence 468999999998875 223444321 111122112333 368899999999999876
No 26
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=51.73 E-value=13 Score=31.52 Aligned_cols=73 Identities=14% Similarity=0.199 Sum_probs=47.6
Q ss_pred HHHHHHHhhccCCCC-CCHHHHHHHHHHHhhcCCCccEEEecCCch--hhhhhhccCCCcEEEecCChhHHHHhhhc
Q 019623 78 ITAALLHYTLTSNST-MTSAELTAVADALSRCSPSCNFLVFGLTHE--TLLWKSLNFQGHTIFVDESEFLVQSFEKN 151 (338)
Q Consensus 78 v~~ALvHYAt~sn~t-qt~~Ei~~~~~vL~~~raPCNfLVFGLg~d--sllW~aLN~gGrTVFLEEd~~~i~~~~~~ 151 (338)
+++++..|+.....+ +.......+...++. ..+.++|=.|-|.- +..++...++++-+-+|=++..++.++++
T Consensus 39 ~l~~l~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~ 114 (232)
T 3ntv_A 39 SIEVLREFAEVNEVPIVDRLTLDLIKQLIRM-NNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQN 114 (232)
T ss_dssp GGGGHHHHHHHTTCCCCCHHHHHHHHHHHHH-HTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCcCHHHHHHHHHHHhh-cCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHH
Confidence 345666677544455 444444555555553 67899999977554 44444444688888999999988877643
No 27
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=48.45 E-value=23 Score=32.02 Aligned_cols=47 Identities=15% Similarity=0.231 Sum_probs=33.7
Q ss_pred HHHHHHhhcCCC--ccEEEe--cCCchhhhhhhccCCCcEEEecCChhHHHHhh
Q 019623 100 AVADALSRCSPS--CNFLVF--GLTHETLLWKSLNFQGHTIFVDESEFLVQSFE 149 (338)
Q Consensus 100 ~~~~vL~~~raP--CNfLVF--GLg~dsllW~aLN~gGrTVFLEEd~~~i~~~~ 149 (338)
.+.+.+.- +.. .++|=. |+|.+++..++. |++-+++|-++..++-++
T Consensus 77 ~l~~al~l-~~g~~~~VLDl~~G~G~dal~lA~~--g~~V~~vE~~~~~~~l~~ 127 (258)
T 2oyr_A 77 AVAKAVGI-KGDYLPDVVDATAGLGRDAFVLASV--GCRVRMLERNPVVAALLD 127 (258)
T ss_dssp HHHHHTTC-BTTBCCCEEETTCTTCHHHHHHHHH--TCCEEEEECCHHHHHHHH
T ss_pred HHHHHhcc-cCCCCCEEEEcCCcCCHHHHHHHHc--CCEEEEEECCHHHHHHHH
Confidence 34455542 444 566654 899999888876 889999999998765554
No 28
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=47.48 E-value=40 Score=26.14 Aligned_cols=58 Identities=17% Similarity=0.112 Sum_probs=38.9
Q ss_pred CCHHHHHHH-HHHHhhcCCCccEEEecCCchhhhh--hhccCCCcEEEecCChhHHHHhhhc
Q 019623 93 MTSAELTAV-ADALSRCSPSCNFLVFGLTHETLLW--KSLNFQGHTIFVDESEFLVQSFEKN 151 (338)
Q Consensus 93 qt~~Ei~~~-~~vL~~~raPCNfLVFGLg~dsllW--~aLN~gGrTVFLEEd~~~i~~~~~~ 151 (338)
+|..|++.. .+.+. .+++.++|.+|-|.-.+.. +...++++-+-+|=++..++.++++
T Consensus 8 ~t~~~~~~~~~~~~~-~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~ 68 (178)
T 3hm2_A 8 LTKQHVRALAISALA-PKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSN 68 (178)
T ss_dssp SHHHHHHHHHHHHHC-CCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHhc-ccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH
Confidence 667776643 33443 3566799999887665544 3444477888889888888877654
No 29
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=46.43 E-value=39 Score=30.00 Aligned_cols=46 Identities=20% Similarity=0.245 Sum_probs=37.8
Q ss_pred CCCccEEEecCCchhhhhhhccCCCcEEEecCChhHHHHhhhcCCC
Q 019623 109 SPSCNFLVFGLTHETLLWKSLNFQGHTIFVDESEFLVQSFEKNHPD 154 (338)
Q Consensus 109 raPCNfLVFGLg~dsllW~aLN~gGrTVFLEEd~~~i~~~~~~~P~ 154 (338)
..|-+.|+.|.|--.+.-..+.++++-+.+|=|+..++.+++..+.
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~~~~v~~veid~~~i~~ar~~~~~ 116 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKYDTHIDFVQADEKILDSFISFFPH 116 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTSSCEEEEECSCHHHHGGGTTTSTT
T ss_pred CCCCEEEEEeCCcCHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHh
Confidence 5688999999998887766666667888999999999998876654
No 30
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=46.36 E-value=54 Score=25.46 Aligned_cols=46 Identities=11% Similarity=0.067 Sum_probs=36.7
Q ss_pred CCCccEEEecCCchhhhhhhccCCCcEEEecCChhHHHHhhhcCCC
Q 019623 109 SPSCNFLVFGLTHETLLWKSLNFQGHTIFVDESEFLVQSFEKNHPD 154 (338)
Q Consensus 109 raPCNfLVFGLg~dsllW~aLN~gGrTVFLEEd~~~i~~~~~~~P~ 154 (338)
+++.++|-+|-|...........|.+.+-+|-++..++.++++.++
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~~ 90 (195)
T 3cgg_A 45 PRGAKILDAGCGQGRIGGYLSKQGHDVLGTDLDPILIDYAKQDFPE 90 (195)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTT
T ss_pred cCCCeEEEECCCCCHHHHHHHHCCCcEEEEcCCHHHHHHHHHhCCC
Confidence 4678999999887776666666678888999999999988877654
No 31
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=46.34 E-value=55 Score=25.32 Aligned_cols=58 Identities=10% Similarity=-0.020 Sum_probs=41.1
Q ss_pred CCHHHHHH-HHHHHhhcCCCccEEEecCCchhhhhhhccCCCcEEEecCChhHHHHhhhc
Q 019623 93 MTSAELTA-VADALSRCSPSCNFLVFGLTHETLLWKSLNFQGHTIFVDESEFLVQSFEKN 151 (338)
Q Consensus 93 qt~~Ei~~-~~~vL~~~raPCNfLVFGLg~dsllW~aLN~gGrTVFLEEd~~~i~~~~~~ 151 (338)
.+..++.. +.+.+. .+.+-++|.+|-|...+.......+++-+-+|-|+..++.++++
T Consensus 16 ~~~~~~~~~~~~~~~-~~~~~~vldiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~ 74 (192)
T 1l3i_A 16 PTAMEVRCLIMCLAE-PGKNDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMN 74 (192)
T ss_dssp CCCHHHHHHHHHHHC-CCTTCEEEEESCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHH
T ss_pred CChHHHHHHHHHhcC-CCCCCEEEEECCCCCHHHHHHHHhcCEEEEEECCHHHHHHHHHH
Confidence 44445443 344443 36778999999988777666666668888899999888877753
No 32
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=45.17 E-value=48 Score=27.12 Aligned_cols=75 Identities=12% Similarity=-0.010 Sum_probs=49.6
Q ss_pred HHHHHHHHHhhc-cCCCC---CCHHHHHHHHHHHhhcCCCccEEEecCCc--hhhhhhhccC-CCcEEEecCChhHHHHh
Q 019623 76 SIITAALLHYTL-TSNST---MTSAELTAVADALSRCSPSCNFLVFGLTH--ETLLWKSLNF-QGHTIFVDESEFLVQSF 148 (338)
Q Consensus 76 ~~v~~ALvHYAt-~sn~t---qt~~Ei~~~~~vL~~~raPCNfLVFGLg~--dsllW~aLN~-gGrTVFLEEd~~~i~~~ 148 (338)
..+++.+-.++. ..... .+...-..+..++.. ..|.++|-.|-|. -+..++...+ +++-+-+|-++..++.+
T Consensus 27 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a 105 (225)
T 3tr6_A 27 PPLLAELREETTRSFSTYAMQTAPEQAQLLALLVKL-MQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALA 105 (225)
T ss_dssp CHHHHHHHHHHHHHCTTGGGSCCHHHHHHHHHHHHH-HTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHH
T ss_pred CHHHHHHHHHHHhhCCCCccccCHHHHHHHHHHHHh-hCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHH
Confidence 356777777764 22222 445555555555554 6789999997754 4444444333 78899999999999888
Q ss_pred hhc
Q 019623 149 EKN 151 (338)
Q Consensus 149 ~~~ 151 (338)
+++
T Consensus 106 ~~~ 108 (225)
T 3tr6_A 106 KEY 108 (225)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
No 33
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=44.37 E-value=79 Score=26.54 Aligned_cols=61 Identities=15% Similarity=0.104 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHhhc-CCCccEEEecCCchhhhhhhccCCCcEEEecCChhHHHHhhhcCCCc
Q 019623 95 SAELTAVADALSRC-SPSCNFLVFGLTHETLLWKSLNFQGHTIFVDESEFLVQSFEKNHPDF 155 (338)
Q Consensus 95 ~~Ei~~~~~vL~~~-raPCNfLVFGLg~dsllW~aLN~gGrTVFLEEd~~~i~~~~~~~P~l 155 (338)
..+...+.+.|.+. ..+.++|=+|-|.-.+.......|.+.+-+|=++..++.++++.+++
T Consensus 34 ~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~ 95 (263)
T 3pfg_A 34 HREAADLAALVRRHSPKAASLLDVACGTGMHLRHLADSFGTVEGLELSADMLAIARRRNPDA 95 (263)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEEEETCTTSHHHHHHTTTSSEEEEEESCHHHHHHHHHHCTTS
T ss_pred HHHHHHHHHHHHhhCCCCCcEEEeCCcCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhCCCC
Confidence 34555566666542 34589999999888887777777888899999999999888776543
No 34
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=44.23 E-value=47 Score=28.46 Aligned_cols=74 Identities=11% Similarity=0.049 Sum_probs=48.6
Q ss_pred HHHHHHHHhhccCCCC-C--CHHHHHHHHHHHhhcCCCccEEEecCCch--hhhhhhccC-CCcEEEecCChhHHHHhhh
Q 019623 77 IITAALLHYTLTSNST-M--TSAELTAVADALSRCSPSCNFLVFGLTHE--TLLWKSLNF-QGHTIFVDESEFLVQSFEK 150 (338)
Q Consensus 77 ~v~~ALvHYAt~sn~t-q--t~~Ei~~~~~vL~~~raPCNfLVFGLg~d--sllW~aLN~-gGrTVFLEEd~~~i~~~~~ 150 (338)
.+++.+..++-....+ + +...-..+..++. ...|.++|-.|-|.- ++.++...+ +|+-+-+|-++..++.+++
T Consensus 28 ~~l~~~~~~~~~~~~p~~~~~~~~~~~l~~l~~-~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~ 106 (248)
T 3tfw_A 28 PVLDRVLENNHRAGLPAHDVAANQGQFLALLVR-LTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARE 106 (248)
T ss_dssp HHHHHHHHHHHHTTCBSCCCCHHHHHHHHHHHH-HHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCccccCHHHHHHHHHHHh-hcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH
Confidence 4567777777644444 2 3444444444444 367999999987654 444444434 7888999999999888775
Q ss_pred c
Q 019623 151 N 151 (338)
Q Consensus 151 ~ 151 (338)
+
T Consensus 107 ~ 107 (248)
T 3tfw_A 107 N 107 (248)
T ss_dssp H
T ss_pred H
Confidence 4
No 35
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=42.70 E-value=21 Score=27.84 Aligned_cols=53 Identities=8% Similarity=0.060 Sum_probs=38.1
Q ss_pred HHHHHHhhcCCCccEEEecCCchhhhhhhccCCCcEEEecCChhHHHHhhhcCC
Q 019623 100 AVADALSRCSPSCNFLVFGLTHETLLWKSLNFQGHTIFVDESEFLVQSFEKNHP 153 (338)
Q Consensus 100 ~~~~vL~~~raPCNfLVFGLg~dsllW~aLN~gGrTVFLEEd~~~i~~~~~~~P 153 (338)
.+.+.+.- +...++|-+|-|...........+++.+-+|-++..++.++++.+
T Consensus 8 ~~~~~~~~-~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~ 60 (170)
T 3i9f_A 8 EYLPNIFE-GKKGVIVDYGCGNGFYCKYLLEFATKLYCIDINVIALKEVKEKFD 60 (170)
T ss_dssp TTHHHHHS-SCCEEEEEETCTTCTTHHHHHTTEEEEEEECSCHHHHHHHHHHCT
T ss_pred HHHHhcCc-CCCCeEEEECCCCCHHHHHHHhhcCeEEEEeCCHHHHHHHHHhCC
Confidence 34444543 567799999988877776666666677888888888888877633
No 36
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=40.69 E-value=80 Score=25.19 Aligned_cols=53 Identities=9% Similarity=0.019 Sum_probs=41.4
Q ss_pred HHHHHHHHhhcCCCccEEEecCCchhhhhhhccCCCcEEEecCChhHHHHhhh
Q 019623 98 LTAVADALSRCSPSCNFLVFGLTHETLLWKSLNFQGHTIFVDESEFLVQSFEK 150 (338)
Q Consensus 98 i~~~~~vL~~~raPCNfLVFGLg~dsllW~aLN~gGrTVFLEEd~~~i~~~~~ 150 (338)
+..+.+.|.+.+...++|-+|-|...+.-.....|.+-+-+|-++..++.+++
T Consensus 34 ~~~~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~ 86 (218)
T 3ou2_A 34 APAALERLRAGNIRGDVLELASGTGYWTRHLSGLADRVTALDGSAEMIAEAGR 86 (218)
T ss_dssp HHHHHHHHTTTTSCSEEEEESCTTSHHHHHHHHHSSEEEEEESCHHHHHHHGG
T ss_pred HHHHHHHHhcCCCCCeEEEECCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHh
Confidence 55677777765666899999888877666666668888889999998888876
No 37
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=39.54 E-value=1.2e+02 Score=24.46 Aligned_cols=57 Identities=12% Similarity=0.035 Sum_probs=44.3
Q ss_pred HHHHHHHHHhhcCCCccEEEecCCchhhhhhhccCCCcEEEecCChhHHHHhhhcCC
Q 019623 97 ELTAVADALSRCSPSCNFLVFGLTHETLLWKSLNFQGHTIFVDESEFLVQSFEKNHP 153 (338)
Q Consensus 97 Ei~~~~~vL~~~raPCNfLVFGLg~dsllW~aLN~gGrTVFLEEd~~~i~~~~~~~P 153 (338)
....+.+.|.+...+.++|=+|-|.-.+.-.....|.+.+-+|-++..++.++++.+
T Consensus 29 ~~~~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~ 85 (250)
T 2p7i_A 29 MHPFMVRAFTPFFRPGNLLELGSFKGDFTSRLQEHFNDITCVEASEEAISHAQGRLK 85 (250)
T ss_dssp HHHHHHHHHGGGCCSSCEEEESCTTSHHHHHHTTTCSCEEEEESCHHHHHHHHHHSC
T ss_pred HHHHHHHHHHhhcCCCcEEEECCCCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhhh
Confidence 345566777765678899999988777666666667788999999999998887765
No 38
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=38.86 E-value=83 Score=25.40 Aligned_cols=56 Identities=16% Similarity=0.122 Sum_probs=41.7
Q ss_pred HHHHHHHHHhhcCCCccEEEecCCchhhhhhhccCCCcEEEecCChhHHHHhhhcCC
Q 019623 97 ELTAVADALSRCSPSCNFLVFGLTHETLLWKSLNFQGHTIFVDESEFLVQSFEKNHP 153 (338)
Q Consensus 97 Ei~~~~~vL~~~raPCNfLVFGLg~dsllW~aLN~gGrTVFLEEd~~~i~~~~~~~P 153 (338)
.+..+.+.+.. +.+.++|-+|-|...+.-.....|.+.+-+|-++..++.++++.+
T Consensus 33 ~~~~~l~~~~~-~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~ 88 (220)
T 3hnr_A 33 HYEDILEDVVN-KSFGNVLEFGVGTGNLTNKLLLAGRTVYGIEPSREMRMIAKEKLP 88 (220)
T ss_dssp THHHHHHHHHH-TCCSEEEEECCTTSHHHHHHHHTTCEEEEECSCHHHHHHHHHHSC
T ss_pred HHHHHHHHhhc-cCCCeEEEeCCCCCHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCC
Confidence 34445555554 578899999988877766666668888889999988888877654
No 39
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=38.59 E-value=1.5e+02 Score=23.76 Aligned_cols=83 Identities=14% Similarity=0.194 Sum_probs=56.9
Q ss_pred CCHHHHHHHHHHHhhcCCCccEEEecCCchhhhhh----hccCCCcEE-Eec-CChhHHHHhhhcCCCceeEEeEecccc
Q 019623 93 MTSAELTAVADALSRCSPSCNFLVFGLTHETLLWK----SLNFQGHTI-FVD-ESEFLVQSFEKNHPDFEIYDVQYTTKV 166 (338)
Q Consensus 93 qt~~Ei~~~~~vL~~~raPCNfLVFGLg~dsllW~----aLN~gGrTV-FLE-Ed~~~i~~~~~~~P~leay~V~Y~T~v 166 (338)
+..+++..+.+.|.+++ ++.|||.|.....=. .|+.-|..+ ++. +...+......-.++--.--+.|.-.-
T Consensus 24 l~~~~l~~~~~~i~~a~---~I~i~G~G~S~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~d~~i~iS~sG~t 100 (187)
T 3sho_A 24 TQPEAIEAAVEAICRAD---HVIVVGMGFSAAVAVFLGHGLNSLGIRTTVLTEGGSTLTITLANLRPTDLMIGVSVWRYL 100 (187)
T ss_dssp CCHHHHHHHHHHHHHCS---EEEEECCGGGHHHHHHHHHHHHHTTCCEEEECCCTHHHHHHHHTCCTTEEEEEECCSSCC
T ss_pred CCHHHHHHHHHHHHhCC---EEEEEecCchHHHHHHHHHHHHhcCCCEEEecCCchhHHHHHhcCCCCCEEEEEeCCCCC
Confidence 67889999999998743 999999998665322 233445554 555 345555555555666666667777666
Q ss_pred cchHHHHHHHHh
Q 019623 167 EEMNPTLHAVRK 178 (338)
Q Consensus 167 ~ea~~LL~~~r~ 178 (338)
.+.-++++.+|+
T Consensus 101 ~~~~~~~~~ak~ 112 (187)
T 3sho_A 101 RDTVAALAGAAE 112 (187)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 777778887886
No 40
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=37.18 E-value=83 Score=25.57 Aligned_cols=59 Identities=24% Similarity=0.182 Sum_probs=41.2
Q ss_pred HHHHHHHHHHhh-cCCCccEEEecCCchhhhhhhccCCCcEEEecCChhHHHHhhhcCCC
Q 019623 96 AELTAVADALSR-CSPSCNFLVFGLTHETLLWKSLNFQGHTIFVDESEFLVQSFEKNHPD 154 (338)
Q Consensus 96 ~Ei~~~~~vL~~-~raPCNfLVFGLg~dsllW~aLN~gGrTVFLEEd~~~i~~~~~~~P~ 154 (338)
.+...+.+.|.+ ...+.++|=+|-|...........+.+-+-+|-++..++.++++.++
T Consensus 25 ~~~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~ 84 (239)
T 3bxo_A 25 AEASDIADLVRSRTPEASSLLDVACGTGTHLEHFTKEFGDTAGLELSEDMLTHARKRLPD 84 (239)
T ss_dssp HHHHHHHHHHHHHCTTCCEEEEETCTTSHHHHHHHHHHSEEEEEESCHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHhcCCCCeEEEecccCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhCCC
Confidence 344555566654 24567899998877666555555566788899999999888877554
No 41
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=36.83 E-value=15 Score=30.11 Aligned_cols=17 Identities=18% Similarity=0.026 Sum_probs=14.1
Q ss_pred cccccEEEEcCCCCCCC
Q 019623 208 DMDWDVVLVDGPSGYFP 224 (338)
Q Consensus 208 e~~WDVImVDgP~Gy~p 224 (338)
.-+.|+|+||+|.|...
T Consensus 129 ~~~yD~viiD~pp~~~~ 145 (254)
T 3kjh_A 129 LDKKEAVVMDMGAGIEH 145 (254)
T ss_dssp HTCCSEEEEEECTTCTT
T ss_pred cCCCCEEEEeCCCcccH
Confidence 34789999999998865
No 42
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=36.53 E-value=1e+02 Score=24.51 Aligned_cols=52 Identities=19% Similarity=0.072 Sum_probs=41.6
Q ss_pred HHHHHHHhhcCCCccEEEecCCchhhhhhhccCCCcEEEecCChhHHHHhhhc
Q 019623 99 TAVADALSRCSPSCNFLVFGLTHETLLWKSLNFQGHTIFVDESEFLVQSFEKN 151 (338)
Q Consensus 99 ~~~~~vL~~~raPCNfLVFGLg~dsllW~aLN~gGrTVFLEEd~~~i~~~~~~ 151 (338)
..+.+.+.. +.|.++|=+|-|.-.........|.+-+-+|-++..++.++++
T Consensus 42 ~~~~~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~ 93 (227)
T 3e8s_A 42 QAILLAILG-RQPERVLDLGCGEGWLLRALADRGIEAVGVDGDRTLVDAARAA 93 (227)
T ss_dssp HHHHHHHHH-TCCSEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHT
T ss_pred HHHHHHhhc-CCCCEEEEeCCCCCHHHHHHHHCCCEEEEEcCCHHHHHHHHHh
Confidence 445566655 6789999999988877776667788888999999999888877
No 43
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=36.27 E-value=1.1e+02 Score=25.23 Aligned_cols=48 Identities=19% Similarity=0.055 Sum_probs=40.2
Q ss_pred CCCccEEEecCCchhhhhhhccCCCcEEEecCChhHHHHhhhcCCCce
Q 019623 109 SPSCNFLVFGLTHETLLWKSLNFQGHTIFVDESEFLVQSFEKNHPDFE 156 (338)
Q Consensus 109 raPCNfLVFGLg~dsllW~aLN~gGrTVFLEEd~~~i~~~~~~~P~le 156 (338)
+.+.++|-+|-|.-.........|.+.+-+|-++..++.++++.|+++
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~ 94 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQAARWAAYDFSPELLKLARANAPHAD 94 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHCTTSE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhCCCce
Confidence 467899999998888888777778899999999999999988765543
No 44
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=36.22 E-value=15 Score=30.48 Aligned_cols=15 Identities=33% Similarity=0.700 Sum_probs=12.6
Q ss_pred ccccEEEEcCCCCCC
Q 019623 209 MDWDVVLVDGPSGYF 223 (338)
Q Consensus 209 ~~WDVImVDgP~Gy~ 223 (338)
-++|+|+||+|.|..
T Consensus 110 ~~yD~viiD~~~~~~ 124 (237)
T 1g3q_A 110 DKFDFILIDCPAGLQ 124 (237)
T ss_dssp GGCSEEEEECCSSSS
T ss_pred hcCCEEEEECCCCcC
Confidence 468999999998764
No 45
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=35.94 E-value=15 Score=30.25 Aligned_cols=14 Identities=50% Similarity=0.902 Sum_probs=12.5
Q ss_pred cccEEEEcCCCCCC
Q 019623 210 DWDVVLVDGPSGYF 223 (338)
Q Consensus 210 ~WDVImVDgP~Gy~ 223 (338)
+.|+|+||+|.|..
T Consensus 108 ~yD~viID~p~~l~ 121 (224)
T 1byi_A 108 QADWVLVEGAGGWF 121 (224)
T ss_dssp TCSEEEEECSSSTT
T ss_pred hCCEEEEEcCCccc
Confidence 68999999999876
No 46
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=35.54 E-value=64 Score=26.97 Aligned_cols=58 Identities=12% Similarity=0.048 Sum_probs=44.5
Q ss_pred CCHHHHHHHHHHHhhcCCCccEEEecCCchhhhhhhc---cCCCcEEEecCChhHHHHhhhc
Q 019623 93 MTSAELTAVADALSRCSPSCNFLVFGLTHETLLWKSL---NFQGHTIFVDESEFLVQSFEKN 151 (338)
Q Consensus 93 qt~~Ei~~~~~vL~~~raPCNfLVFGLg~dsllW~aL---N~gGrTVFLEEd~~~i~~~~~~ 151 (338)
+..+++..+...+.- +.+.++|.+|-|.-.+.-... +++++-+-+|-++..++.++++
T Consensus 77 ~~~~~~~~i~~~~~~-~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~ 137 (255)
T 3mb5_A 77 VHPKDAALIVAYAGI-SPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWEN 137 (255)
T ss_dssp CCHHHHHHHHHHTTC-CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHH
T ss_pred ccHhHHHHHHHhhCC-CCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHH
Confidence 788888888888874 778899999887765543333 5588888889888888877643
No 47
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=35.48 E-value=50 Score=26.76 Aligned_cols=58 Identities=12% Similarity=0.122 Sum_probs=41.5
Q ss_pred CCHHHH-HHHHHHHhhcCCCccEEEecCCch--hhhhhhccCCCcEEEecCChhHHHHhhhc
Q 019623 93 MTSAEL-TAVADALSRCSPSCNFLVFGLTHE--TLLWKSLNFQGHTIFVDESEFLVQSFEKN 151 (338)
Q Consensus 93 qt~~Ei-~~~~~vL~~~raPCNfLVFGLg~d--sllW~aLN~gGrTVFLEEd~~~i~~~~~~ 151 (338)
++..|+ ..+...+. .+...++|-+|-|.- +..++...++++-+-+|-|+..++.++++
T Consensus 23 ~~~~~i~~~~l~~l~-~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~ 83 (204)
T 3e05_A 23 ITKQEVRAVTLSKLR-LQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDN 83 (204)
T ss_dssp SCCHHHHHHHHHHTT-CCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHH
T ss_pred CChHHHHHHHHHHcC-CCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH
Confidence 578888 44555554 367789999987654 44555555568888899999988887754
No 48
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=34.30 E-value=91 Score=24.88 Aligned_cols=57 Identities=11% Similarity=0.026 Sum_probs=43.5
Q ss_pred HHHHHHHHHHhhcCCCccEEEecCCchhhhhhhccCCCcEEEecCChhHHHHhhhcCCC
Q 019623 96 AELTAVADALSRCSPSCNFLVFGLTHETLLWKSLNFQGHTIFVDESEFLVQSFEKNHPD 154 (338)
Q Consensus 96 ~Ei~~~~~vL~~~raPCNfLVFGLg~dsllW~aLN~gGrTVFLEEd~~~i~~~~~~~P~ 154 (338)
.+...+...+.. .+-++|-+|-|...........|.+.+-+|-++..++.++++.++
T Consensus 29 ~~~~~l~~~~~~--~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~ 85 (203)
T 3h2b_A 29 PDRVLIEPWATG--VDGVILDVGSGTGRWTGHLASLGHQIEGLEPATRLVELARQTHPS 85 (203)
T ss_dssp TTHHHHHHHHHH--CCSCEEEETCTTCHHHHHHHHTTCCEEEECCCHHHHHHHHHHCTT
T ss_pred HHHHHHHHHhcc--CCCeEEEecCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhCCC
Confidence 455566777765 388999999888777666666677888899999999888877554
No 49
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=33.15 E-value=18 Score=31.17 Aligned_cols=15 Identities=33% Similarity=0.399 Sum_probs=12.7
Q ss_pred ccccEEEEcCCCCCC
Q 019623 209 MDWDVVLVDGPSGYF 223 (338)
Q Consensus 209 ~~WDVImVDgP~Gy~ 223 (338)
-++|+|+||+|.|..
T Consensus 127 ~~yD~ViID~pp~~~ 141 (262)
T 2ph1_A 127 GELDHLLIDLPPGTG 141 (262)
T ss_dssp CSCSEEEEECCSSSS
T ss_pred cCCCEEEEECcCCCc
Confidence 468999999999864
No 50
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=32.61 E-value=1.1e+02 Score=25.84 Aligned_cols=55 Identities=16% Similarity=0.114 Sum_probs=37.0
Q ss_pred HHHHHHhhc--CCCccEEEecCCchhhhhhhcc--CCCcEEEecCChhHHHHhhhcCCC
Q 019623 100 AVADALSRC--SPSCNFLVFGLTHETLLWKSLN--FQGHTIFVDESEFLVQSFEKNHPD 154 (338)
Q Consensus 100 ~~~~vL~~~--raPCNfLVFGLg~dsllW~aLN--~gGrTVFLEEd~~~i~~~~~~~P~ 154 (338)
.+.+.+.+. +.+-++|.+|-|...+.-.... +|++-+-+|-++..++.++++.++
T Consensus 73 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~ 131 (269)
T 1p91_A 73 AIVAQLRERLDDKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQ 131 (269)
T ss_dssp HHHHHHHHHSCTTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTT
T ss_pred HHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCCC
Confidence 344444432 4577999998877554433333 477888899999999888877654
No 51
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=31.05 E-value=67 Score=26.31 Aligned_cols=60 Identities=13% Similarity=0.002 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHhhcCCCccEEEecCCchhhhh--hhccCCCcEEEecCChhHHHHhhhcCCC
Q 019623 95 SAELTAVADALSRCSPSCNFLVFGLTHETLLW--KSLNFQGHTIFVDESEFLVQSFEKNHPD 154 (338)
Q Consensus 95 ~~Ei~~~~~vL~~~raPCNfLVFGLg~dsllW--~aLN~gGrTVFLEEd~~~i~~~~~~~P~ 154 (338)
...+..+.+.+...+.+.++|=+|-|.-.... +...++++.+-+|-++..++.++++.+.
T Consensus 29 ~~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~ 90 (234)
T 3dtn_A 29 DDFYGVSVSIASVDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRG 90 (234)
T ss_dssp HHHHHHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhcc
Confidence 34456666666644678899999877655544 4444478888899999888888776543
No 52
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=30.11 E-value=21 Score=28.69 Aligned_cols=13 Identities=38% Similarity=0.828 Sum_probs=11.2
Q ss_pred cccEEEEcCCCCC
Q 019623 210 DWDVVLVDGPSGY 222 (338)
Q Consensus 210 ~WDVImVDgP~Gy 222 (338)
+.|+|+||+|.|.
T Consensus 75 ~yD~viiD~~~~~ 87 (206)
T 4dzz_A 75 DYDFAIVDGAGSL 87 (206)
T ss_dssp TSSEEEEECCSSS
T ss_pred CCCEEEEECCCCC
Confidence 4799999999876
No 53
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=29.90 E-value=90 Score=25.86 Aligned_cols=58 Identities=16% Similarity=0.129 Sum_probs=43.1
Q ss_pred CCHHHHHHHHHHHhhcCCCccEEEecCCchhhh--hhhc-cCCCcEEEecCChhHHHHhhhc
Q 019623 93 MTSAELTAVADALSRCSPSCNFLVFGLTHETLL--WKSL-NFQGHTIFVDESEFLVQSFEKN 151 (338)
Q Consensus 93 qt~~Ei~~~~~vL~~~raPCNfLVFGLg~dsll--W~aL-N~gGrTVFLEEd~~~i~~~~~~ 151 (338)
+..+++..+...+.- +...++|.+|-|.-.+. ++.. +++++-+-+|-++..++.++++
T Consensus 80 ~~~~~~~~~~~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~ 140 (258)
T 2pwy_A 80 TYPKDASAMVTLLDL-APGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERN 140 (258)
T ss_dssp CCHHHHHHHHHHTTC-CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHH
T ss_pred ccchHHHHHHHHcCC-CCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHH
Confidence 778888888887763 77889999988765443 3333 5578888888899888877754
No 54
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=28.42 E-value=1.1e+02 Score=26.00 Aligned_cols=52 Identities=17% Similarity=0.175 Sum_probs=40.1
Q ss_pred HHHHhhcCCCccEEEecCCchhhhhhhccCCCcEEEecCChhHHHHhhhcCCC
Q 019623 102 ADALSRCSPSCNFLVFGLTHETLLWKSLNFQGHTIFVDESEFLVQSFEKNHPD 154 (338)
Q Consensus 102 ~~vL~~~raPCNfLVFGLg~dsllW~aLN~gGrTVFLEEd~~~i~~~~~~~P~ 154 (338)
.+.+.. +.+.++|-+|-|..........+|++.+-+|-++..++.++++.++
T Consensus 50 ~~~l~~-~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~ 101 (279)
T 3ccf_A 50 LQLLNP-QPGEFILDLGCGTGQLTEKIAQSGAEVLGTDNAATMIEKARQNYPH 101 (279)
T ss_dssp HHHHCC-CTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTT
T ss_pred HHHhCC-CCCCEEEEecCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHhhCCC
Confidence 344443 5678999999988777776666889999999999999888776543
No 55
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=28.33 E-value=1.8e+02 Score=25.96 Aligned_cols=45 Identities=13% Similarity=0.181 Sum_probs=36.9
Q ss_pred CCCccEEEecCCchhhhhhhccC--CCcEEEecCChhHHHHhhhcCC
Q 019623 109 SPSCNFLVFGLTHETLLWKSLNF--QGHTIFVDESEFLVQSFEKNHP 153 (338)
Q Consensus 109 raPCNfLVFGLg~dsllW~aLN~--gGrTVFLEEd~~~i~~~~~~~P 153 (338)
..|.++|+.|.|.-.+.-..+.+ +++-+.+|-|+..++.+++..+
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~ 135 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLK 135 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCH
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhH
Confidence 56899999999988877766665 4688999999999998887653
No 56
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=28.01 E-value=39 Score=29.17 Aligned_cols=75 Identities=16% Similarity=0.021 Sum_probs=49.4
Q ss_pred HHHHHHHHHhhccCCCC---CCHHHHHHHHHHHhhcCCCccEEEecCC--chhhhhhhcc-CCCcEEEecCChhHHHHhh
Q 019623 76 SIITAALLHYTLTSNST---MTSAELTAVADALSRCSPSCNFLVFGLT--HETLLWKSLN-FQGHTIFVDESEFLVQSFE 149 (338)
Q Consensus 76 ~~v~~ALvHYAt~sn~t---qt~~Ei~~~~~vL~~~raPCNfLVFGLg--~dsllW~aLN-~gGrTVFLEEd~~~i~~~~ 149 (338)
.++++.+..|+...... .+...-..+..+++. ..|-++|=.|-| ..++.++... .+|+-+-+|-++.+++.++
T Consensus 24 ~~~l~~~~~~~~~~~~~~~~i~~~~~~~l~~l~~~-~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~ 102 (242)
T 3r3h_A 24 HPALAALRKETSTMELANMQVAPEQAQFMQMLIRL-TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAH 102 (242)
T ss_dssp CHHHHHHHHTTSSSGGGGTSCCHHHHHHHHHHHHH-HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSH
T ss_pred CHHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHhh-cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence 35788888888533222 344555555555554 678999999764 4555555543 4889999999998877666
Q ss_pred hc
Q 019623 150 KN 151 (338)
Q Consensus 150 ~~ 151 (338)
++
T Consensus 103 ~~ 104 (242)
T 3r3h_A 103 PY 104 (242)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 57
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=27.26 E-value=1.8e+02 Score=25.01 Aligned_cols=14 Identities=21% Similarity=0.230 Sum_probs=7.9
Q ss_pred CCcHHHHHHHHHhh
Q 019623 73 SSSSIITAALLHYT 86 (338)
Q Consensus 73 ~lp~~v~~ALvHYA 86 (338)
+.|+.|.+|+..+.
T Consensus 20 ~~~~~v~~a~~~~~ 33 (371)
T 2e7j_A 20 KLTEEARQALLEWG 33 (371)
T ss_dssp CCCHHHHHHHHHC-
T ss_pred CCCHHHHHHHHHHH
Confidence 45666666666554
No 58
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10
Probab=27.08 E-value=26 Score=29.68 Aligned_cols=15 Identities=33% Similarity=0.601 Sum_probs=12.5
Q ss_pred ccccEEEEcCCCCCC
Q 019623 209 MDWDVVLVDGPSGYF 223 (338)
Q Consensus 209 ~~WDVImVDgP~Gy~ 223 (338)
-+.|+|+||+|.|..
T Consensus 109 ~~yD~viiD~~~~~~ 123 (263)
T 1hyq_A 109 ESTDILLLDAPAGLE 123 (263)
T ss_dssp HTCSEEEEECCSSSS
T ss_pred hhCCEEEEeCCCCCC
Confidence 368999999998765
No 59
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=26.94 E-value=1.6e+02 Score=26.25 Aligned_cols=45 Identities=18% Similarity=0.227 Sum_probs=36.6
Q ss_pred CCCccEEEecCCchhhhhhhccC--CCcEEEecCChhHHHHhhhcCC
Q 019623 109 SPSCNFLVFGLTHETLLWKSLNF--QGHTIFVDESEFLVQSFEKNHP 153 (338)
Q Consensus 109 raPCNfLVFGLg~dsllW~aLN~--gGrTVFLEEd~~~i~~~~~~~P 153 (338)
+.|.++|+.|.|.-.+.-..+.+ +++-+.+|=|+..++.+++..|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~ 140 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFP 140 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCH
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhH
Confidence 57889999999988777666655 5688899999999998887654
No 60
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=26.92 E-value=1.1e+02 Score=25.12 Aligned_cols=58 Identities=19% Similarity=0.150 Sum_probs=41.0
Q ss_pred CCHHHHHHHHHHHhhcCCCccEEEecCCchhhhhhhccCCCcEEEecCChhHHHHhhhc
Q 019623 93 MTSAELTAVADALSRCSPSCNFLVFGLTHETLLWKSLNFQGHTIFVDESEFLVQSFEKN 151 (338)
Q Consensus 93 qt~~Ei~~~~~vL~~~raPCNfLVFGLg~dsllW~aLN~gGrTVFLEEd~~~i~~~~~~ 151 (338)
+...++..+.+.+.- +..-++|.+|-|.-.+.-.....+++-+.+|-++..++.++++
T Consensus 75 ~~~~~~~~~~~~~~~-~~~~~vldiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~ 132 (248)
T 2yvl_A 75 IYPKDSFYIALKLNL-NKEKRVLEFGTGSGALLAVLSEVAGEVWTFEAVEEFYKTAQKN 132 (248)
T ss_dssp CCHHHHHHHHHHTTC-CTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHH
T ss_pred ccchhHHHHHHhcCC-CCCCEEEEeCCCccHHHHHHHHhCCEEEEEecCHHHHHHHHHH
Confidence 556777777776653 6678999998876554433333378888888899888877644
No 61
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=26.69 E-value=2.1e+02 Score=21.88 Aligned_cols=56 Identities=7% Similarity=-0.066 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHhhcCCCccEEEecCCchhhhhhhccCCCcEEEecCChhHHHHhhhc
Q 019623 95 SAELTAVADALSRCSPSCNFLVFGLTHETLLWKSLNFQGHTIFVDESEFLVQSFEKN 151 (338)
Q Consensus 95 ~~Ei~~~~~vL~~~raPCNfLVFGLg~dsllW~aLN~gGrTVFLEEd~~~i~~~~~~ 151 (338)
..-...+.+.+.. +.+.++|=+|-|.-.+......++++-+-+|-++..++.++++
T Consensus 21 ~~~~~~~~~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~ 76 (183)
T 2yxd_A 21 EEIRAVSIGKLNL-NKDDVVVDVGCGSGGMTVEIAKRCKFVYAIDYLDGAIEVTKQN 76 (183)
T ss_dssp HHHHHHHHHHHCC-CTTCEEEEESCCCSHHHHHHHTTSSEEEEEECSHHHHHHHHHH
T ss_pred HHHHHHHHHHcCC-CCCCEEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHH
Confidence 3334455555643 6677999998888776655555778888899999998887754
No 62
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=26.39 E-value=19 Score=29.85 Aligned_cols=15 Identities=20% Similarity=0.126 Sum_probs=12.8
Q ss_pred cccEEEEcCCCCCCC
Q 019623 210 DWDVVLVDGPSGYFP 224 (338)
Q Consensus 210 ~WDVImVDgP~Gy~p 224 (338)
+.|+|+||+|.|...
T Consensus 118 ~yD~viiD~p~~~~~ 132 (245)
T 3ea0_A 118 FYDYIIVDFGASIDH 132 (245)
T ss_dssp HCSEEEEEEESSCCT
T ss_pred hCCEEEEeCCCCCch
Confidence 689999999998754
No 63
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=26.02 E-value=1.5e+02 Score=24.46 Aligned_cols=58 Identities=10% Similarity=0.011 Sum_probs=43.2
Q ss_pred CHHHHHHHHHHHhhc--CCCccEEEecCCchhhhhhhccCCCcEEEecCChhHHHHhhhc
Q 019623 94 TSAELTAVADALSRC--SPSCNFLVFGLTHETLLWKSLNFQGHTIFVDESEFLVQSFEKN 151 (338)
Q Consensus 94 t~~Ei~~~~~vL~~~--raPCNfLVFGLg~dsllW~aLN~gGrTVFLEEd~~~i~~~~~~ 151 (338)
...++..+.++++.. +.+.++|=+|-|...........|.+-+-+|-++..++.++++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~ 82 (252)
T 1wzn_A 23 VKAEIDFVEEIFKEDAKREVRRVLDLACGTGIPTLELAERGYEVVGLDLHEEMLRVARRK 82 (252)
T ss_dssp HHHHHHHHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHH
Confidence 345677777777653 3467899998887766665566678888899999998877743
No 64
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=25.98 E-value=1.4e+02 Score=27.32 Aligned_cols=54 Identities=11% Similarity=-0.017 Sum_probs=36.5
Q ss_pred HHHHHHHhhcCCCccEEEecCCchhhhhhhccCCCcEEEecCChhHHHHhhhcC
Q 019623 99 TAVADALSRCSPSCNFLVFGLTHETLLWKSLNFQGHTIFVDESEFLVQSFEKNH 152 (338)
Q Consensus 99 ~~~~~vL~~~raPCNfLVFGLg~dsllW~aLN~gGrTVFLEEd~~~i~~~~~~~ 152 (338)
..+.+.++....+.++|=.|-|.-...-.+...|.+.+.+|-|+..++.++++.
T Consensus 142 ~~l~~~~~~~~~~~~VLDlgcGtG~~sl~la~~ga~V~~VD~s~~al~~a~~n~ 195 (332)
T 2igt_A 142 EWLKNAVETADRPLKVLNLFGYTGVASLVAAAAGAEVTHVDASKKAIGWAKENQ 195 (332)
T ss_dssp HHHHHHHHHSSSCCEEEEETCTTCHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCcEEEcccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHH
Confidence 345555542234678888877665554444445668889999999999888653
No 65
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=25.79 E-value=46 Score=31.04 Aligned_cols=42 Identities=17% Similarity=0.188 Sum_probs=33.0
Q ss_pred HHHhhcCCCccEEEecCCchhhhhhhccCCCcEEEecCC-hhHH
Q 019623 103 DALSRCSPSCNFLVFGLTHETLLWKSLNFQGHTIFVDES-EFLV 145 (338)
Q Consensus 103 ~vL~~~raPCNfLVFGLg~dsllW~aLN~gGrTVFLEEd-~~~i 145 (338)
+.|++ ...|.++++|=|.|+..|.-.|.++++.|.|=| |.-+
T Consensus 91 ~fl~~-~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~P~vi 133 (334)
T 1rjd_A 91 EFLVA-NEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDYNESV 133 (334)
T ss_dssp HHHHH-CSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEECHHHH
T ss_pred HHHHH-CCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCCHHHH
Confidence 34544 568999999999999999999986677888877 4443
No 66
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=25.70 E-value=1.2e+02 Score=25.07 Aligned_cols=61 Identities=15% Similarity=0.117 Sum_probs=41.2
Q ss_pred CCCCCHHHHHH-HHHHHhhcCCCccEEEecCCchhhhhhhccCCCcEEEecCChhHHHHhhhc
Q 019623 90 NSTMTSAELTA-VADALSRCSPSCNFLVFGLTHETLLWKSLNFQGHTIFVDESEFLVQSFEKN 151 (338)
Q Consensus 90 n~tqt~~Ei~~-~~~vL~~~raPCNfLVFGLg~dsllW~aLN~gGrTVFLEEd~~~i~~~~~~ 151 (338)
+..++..|++. +...+. .+..-.+|-+|-|.-.+.-.....+++-+-+|-++..++.++++
T Consensus 35 ~~~~~~~~~~~~~l~~l~-~~~~~~vLDlGcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~ 96 (204)
T 3njr_A 35 DGQITKSPMRALTLAALA-PRRGELLWDIGGGSGSVSVEWCLAGGRAITIEPRADRIENIQKN 96 (204)
T ss_dssp SSCCCCHHHHHHHHHHHC-CCTTCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred CCCCCcHHHHHHHHHhcC-CCCCCEEEEecCCCCHHHHHHHHcCCEEEEEeCCHHHHHHHHHH
Confidence 44577777764 444454 36667899998876554433333388888899999998887754
No 67
>2oze_A ORF delta'; para, walker type atpases, DNA segregation, PSM19035, plasmid, DNA binding protein; HET: AGS EPE; 1.83A {Streptococcus pyogenes}
Probab=25.69 E-value=24 Score=30.64 Aligned_cols=15 Identities=20% Similarity=0.403 Sum_probs=12.5
Q ss_pred ccccEEEEcCCCCCC
Q 019623 209 MDWDVVLVDGPSGYF 223 (338)
Q Consensus 209 ~~WDVImVDgP~Gy~ 223 (338)
-++|+|+||+|.|..
T Consensus 153 ~~yD~IiiD~pp~~~ 167 (298)
T 2oze_A 153 SDYDLIIIDTVPTPS 167 (298)
T ss_dssp GGCSEEEEEECSSCS
T ss_pred cCCCEEEEECCCCcc
Confidence 368999999998764
No 68
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=25.16 E-value=30 Score=29.57 Aligned_cols=15 Identities=33% Similarity=0.638 Sum_probs=12.6
Q ss_pred ccccEEEEcCCCCCC
Q 019623 209 MDWDVVLVDGPSGYF 223 (338)
Q Consensus 209 ~~WDVImVDgP~Gy~ 223 (338)
-+.|+|+||+|.|..
T Consensus 110 ~~yD~iiiD~pp~~~ 124 (257)
T 1wcv_1 110 EGYDLVLLDAPPSLS 124 (257)
T ss_dssp TTCSEEEEECCSSCC
T ss_pred cCCCEEEEeCCCCCC
Confidence 468999999998864
No 69
>2woo_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; 3.01A {Schizosaccharomyces pombe}
Probab=25.06 E-value=28 Score=31.73 Aligned_cols=34 Identities=9% Similarity=0.206 Sum_probs=21.1
Q ss_pred CCccEEEe----cCCchhh----hhhhccCCCcEEEecCChh
Q 019623 110 PSCNFLVF----GLTHETL----LWKSLNFQGHTIFVDESEF 143 (338)
Q Consensus 110 aPCNfLVF----GLg~dsl----lW~aLN~gGrTVFLEEd~~ 143 (338)
.+-.++|| |.|.-+. .++.-..|=||+.+|-|+.
T Consensus 17 ~~~~i~v~sgkGGvGKTTva~~LA~~lA~~G~rVllvD~D~~ 58 (329)
T 2woo_A 17 TSLKWIFVGGKGGVGKTTTSCSLAIQMSKVRSSVLLISTDPA 58 (329)
T ss_dssp TTCCEEEEECSSSSSHHHHHHHHHHHHHTSSSCEEEEECCTT
T ss_pred CCCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEECCCC
Confidence 34566777 5666542 3333345668999998875
No 70
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=24.95 E-value=1.2e+02 Score=24.74 Aligned_cols=59 Identities=12% Similarity=-0.059 Sum_probs=41.8
Q ss_pred CHHHHHHHHHHHhhcCCCccEEEecCCchhhhhhhccCCCcEEEecCChhHHHHhhhcCC
Q 019623 94 TSAELTAVADALSRCSPSCNFLVFGLTHETLLWKSLNFQGHTIFVDESEFLVQSFEKNHP 153 (338)
Q Consensus 94 t~~Ei~~~~~vL~~~raPCNfLVFGLg~dsllW~aLN~gGrTVFLEEd~~~i~~~~~~~P 153 (338)
...-+..+.+.+.. +++.++|-+|-|...+.......+++-+-+|-++..++.++++..
T Consensus 55 ~~~~~~~~~~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~ 113 (231)
T 1vbf_A 55 ALNLGIFMLDELDL-HKGQKVLEIGTGIGYYTALIAEIVDKVVSVEINEKMYNYASKLLS 113 (231)
T ss_dssp CHHHHHHHHHHTTC-CTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHT
T ss_pred CHHHHHHHHHhcCC-CCCCEEEEEcCCCCHHHHHHHHHcCEEEEEeCCHHHHHHHHHHHh
Confidence 34445556666653 667899999887766555555556888889999999888876644
No 71
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=24.93 E-value=30 Score=28.94 Aligned_cols=14 Identities=29% Similarity=0.757 Sum_probs=12.0
Q ss_pred cccEEEEcCCCCCC
Q 019623 210 DWDVVLVDGPSGYF 223 (338)
Q Consensus 210 ~WDVImVDgP~Gy~ 223 (338)
+.|+|+||+|.|..
T Consensus 113 ~yD~viiD~p~~~~ 126 (260)
T 3q9l_A 113 DFEFIVCDSPAGIE 126 (260)
T ss_dssp TCSEEEEECCSSSS
T ss_pred CCCEEEEcCCCCCC
Confidence 67999999998764
No 72
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=24.78 E-value=1.6e+02 Score=23.74 Aligned_cols=59 Identities=17% Similarity=0.114 Sum_probs=44.1
Q ss_pred CCHHHHHHHHHHHhhcCCCccEEEecCCchhhhhhhccCC--CcEEEecCChhHHHHhhhcC
Q 019623 93 MTSAELTAVADALSRCSPSCNFLVFGLTHETLLWKSLNFQ--GHTIFVDESEFLVQSFEKNH 152 (338)
Q Consensus 93 qt~~Ei~~~~~vL~~~raPCNfLVFGLg~dsllW~aLN~g--GrTVFLEEd~~~i~~~~~~~ 152 (338)
+...-+..+.+.|.. ..+.++|=+|-|.-.+.......+ .+.+-+|-|+..++.++++.
T Consensus 13 ~~~~~~~~l~~~l~~-~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~ 73 (219)
T 3jwg_A 13 LNQQRLGTVVAVLKS-VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRL 73 (219)
T ss_dssp HHHHHHHHHHHHHHH-TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHhh-cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHH
Confidence 455667778888876 778999999887766655555444 58888999999888887654
No 73
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=24.75 E-value=93 Score=25.70 Aligned_cols=47 Identities=9% Similarity=-0.077 Sum_probs=35.3
Q ss_pred CCCccEEEecCCchhhhhhhcc--CCCcEEEecCChhHHHHhhhcCCCc
Q 019623 109 SPSCNFLVFGLTHETLLWKSLN--FQGHTIFVDESEFLVQSFEKNHPDF 155 (338)
Q Consensus 109 raPCNfLVFGLg~dsllW~aLN--~gGrTVFLEEd~~~i~~~~~~~P~l 155 (338)
+.+.++|-+|-|...+...... ++++.+-+|-++..++.++++.+++
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~ 80 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRLPNT 80 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHSTTS
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCCCc
Confidence 5678999998876655444443 4889999999999999888765543
No 74
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=24.75 E-value=26 Score=30.70 Aligned_cols=15 Identities=33% Similarity=0.636 Sum_probs=12.4
Q ss_pred ccccEEEEcCCCCCC
Q 019623 209 MDWDVVLVDGPSGYF 223 (338)
Q Consensus 209 ~~WDVImVDgP~Gy~ 223 (338)
-+.|+|+||+|.|..
T Consensus 102 ~~yD~viiD~p~~~~ 116 (286)
T 2xj4_A 102 AECDFILIDTPGGDS 116 (286)
T ss_dssp HHCSEEEEECCSSCC
T ss_pred hcCCEEEEcCCCCcc
Confidence 358999999998863
No 75
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=24.56 E-value=2.5e+02 Score=22.38 Aligned_cols=83 Identities=11% Similarity=0.206 Sum_probs=51.2
Q ss_pred CCHHHHHHHHHHHhhcCCCccEEEecCCchhhhh----hhccCCCc-EEEecCChhHHHHhhhcCCCceeEEeEeccccc
Q 019623 93 MTSAELTAVADALSRCSPSCNFLVFGLTHETLLW----KSLNFQGH-TIFVDESEFLVQSFEKNHPDFEIYDVQYTTKVE 167 (338)
Q Consensus 93 qt~~Ei~~~~~vL~~~raPCNfLVFGLg~dsllW----~aLN~gGr-TVFLEEd~~~i~~~~~~~P~leay~V~Y~T~v~ 167 (338)
+.. +|..+.+.|.+ +.-++.|||.|.-...= ..|+.-|. ..++.+.......+..-.++--.--+.|.-.-.
T Consensus 34 ~~~-~i~~~~~~i~~--a~~~I~i~G~G~S~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~d~vI~iS~sG~t~ 110 (183)
T 2xhz_A 34 INQ-NFTLACEKMFW--CKGKVVVMGMGASGHIGRKMAATFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESS 110 (183)
T ss_dssp SSH-HHHHHHHHHHT--CSSCEEEEECHHHHHHHHHHHHHHHTTTCCEEECCTTHHHHHTSTTCCTTCEEEEECSSSCCH
T ss_pred HHH-HHHHHHHHHHh--CCCeEEEEeecHHHHHHHHHHHHHHhcCceEEEeCchHHhhhhhccCCCCCEEEEEeCCCCCH
Confidence 455 89999999976 34689999999866432 23444454 445554443333333334554556666766666
Q ss_pred chHHHHHHHHh
Q 019623 168 EMNPTLHAVRK 178 (338)
Q Consensus 168 ea~~LL~~~r~ 178 (338)
+.-++++.+|+
T Consensus 111 ~~~~~~~~ak~ 121 (183)
T 2xhz_A 111 EITALIPVLKR 121 (183)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHH
Confidence 67777777775
No 76
>3cwq_A Para family chromosome partitioning protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: ADP; 2.47A {Synechocystis SP}
Probab=24.53 E-value=24 Score=29.67 Aligned_cols=15 Identities=7% Similarity=0.118 Sum_probs=12.5
Q ss_pred ccccEEEEcCCCC-CC
Q 019623 209 MDWDVVLVDGPSG-YF 223 (338)
Q Consensus 209 ~~WDVImVDgP~G-y~ 223 (338)
-++|+|+||.|.| ..
T Consensus 66 ~~yD~viiD~p~~~~~ 81 (209)
T 3cwq_A 66 PKYQNIVIDTQARPED 81 (209)
T ss_dssp GGCSEEEEEEECCCSS
T ss_pred hcCCEEEEeCCCCcCc
Confidence 4689999999998 54
No 77
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=24.48 E-value=2.2e+02 Score=24.48 Aligned_cols=57 Identities=12% Similarity=-0.032 Sum_probs=41.3
Q ss_pred CCHHHHHHHHHHHhhcCCCccEEEecCCchhhhhhhc---cCCCcEEEecCChhHHHHhhhc
Q 019623 93 MTSAELTAVADALSRCSPSCNFLVFGLTHETLLWKSL---NFQGHTIFVDESEFLVQSFEKN 151 (338)
Q Consensus 93 qt~~Ei~~~~~vL~~~raPCNfLVFGLg~dsllW~aL---N~gGrTVFLEEd~~~i~~~~~~ 151 (338)
....=+..+...+. ..+-++|=+|-|......... +++.+-+-+|=++..++.++++
T Consensus 21 y~~~~~~~l~~~~~--~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~ 80 (299)
T 3g5t_A 21 YPSDFYKMIDEYHD--GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVI 80 (299)
T ss_dssp CCHHHHHHHHHHCC--SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhc--CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHH
Confidence 33333444444432 367889999998888777777 6888999999999998887754
No 78
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=24.47 E-value=2.7e+02 Score=23.81 Aligned_cols=106 Identities=11% Similarity=0.042 Sum_probs=52.9
Q ss_pred CCCCCcHHHHHHHHHhhccCCCC----CCHHHH-HHHHHHHhhcCCCccEEEecCCchhh---hhhhccCCCcEEEecCC
Q 019623 70 SSSSSSSIITAALLHYTLTSNST----MTSAEL-TAVADALSRCSPSCNFLVFGLTHETL---LWKSLNFQGHTIFVDES 141 (338)
Q Consensus 70 s~~~lp~~v~~ALvHYAt~sn~t----qt~~Ei-~~~~~vL~~~raPCNfLVFGLg~dsl---lW~aLN~gGrTVFLEEd 141 (338)
++.++|+.|.+|+..+.. .... .-..|+ +.+++.+.. ..+-.=++|+=|-... +...++ .|..|.+.+.
T Consensus 9 gp~~~~~~v~~a~~~~~~-~~~~~~~~~~~~~~~~~la~~~~~-~~~~~~v~~~~g~t~al~~~~~~~~-~gd~vi~~~~ 85 (384)
T 3zrp_A 9 GPTTIKEDVLVAGLENNV-GFTSKEFVEALAYSLKGLRYVMGA-SKNYQPLIIPGGGTSAMESVTSLLK-PNDKILVVSN 85 (384)
T ss_dssp SCSCCCHHHHHHTTCCSC-CTTSHHHHHHHHHHHHHHHHHHTC-CTTSEEEEEESCHHHHHHHGGGGCC-TTCEEEEECS
T ss_pred CCCCCCHHHHHHhhcccc-ccccHHHHHHHHHHHHHHHHHhCC-CCCCcEEEEcCCcHHHHHHHHhhcC-CCCEEEEecC
Confidence 346899999999988764 2222 112222 233444432 3221345565554333 333334 5677888777
Q ss_pred hhHHHHhh--hcCCCceeEEeEeccc-ccchHHHHHHHHh
Q 019623 142 EFLVQSFE--KNHPDFEIYDVQYTTK-VEEMNPTLHAVRK 178 (338)
Q Consensus 142 ~~~i~~~~--~~~P~leay~V~Y~T~-v~ea~~LL~~~r~ 178 (338)
.++-..+. .+.-+.+...|..+.. .-+.++|.+..++
T Consensus 86 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~ 125 (384)
T 3zrp_A 86 GVFGDRWEQIFKRYPVNVKVLRPSPGDYVKPGEVEEEVRK 125 (384)
T ss_dssp SHHHHHHHHHHTTSSCEEEEECCSTTCCCCHHHHHHHHHH
T ss_pred CcchHHHHHHHHHcCCcEEEecCCCCCCCCHHHHHHHHHh
Confidence 66432222 1234555555544321 1245666655554
No 79
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=24.03 E-value=1.1e+02 Score=24.44 Aligned_cols=55 Identities=13% Similarity=-0.019 Sum_probs=38.7
Q ss_pred HHHHHHHHHhhcCCCccEEEecCCchhh-hhhhccCCCcEEEecCChhHHHHhhhc
Q 019623 97 ELTAVADALSRCSPSCNFLVFGLTHETL-LWKSLNFQGHTIFVDESEFLVQSFEKN 151 (338)
Q Consensus 97 Ei~~~~~vL~~~raPCNfLVFGLg~dsl-lW~aLN~gGrTVFLEEd~~~i~~~~~~ 151 (338)
.+....+.+.....+.++|=+|-|.... +....++|.+.+-+|-++..++.++++
T Consensus 10 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~ 65 (209)
T 2p8j_A 10 QLYRFLKYCNESNLDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENF 65 (209)
T ss_dssp HHHHHHHHHHHSSSCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHH
T ss_pred hHHHHHHHHhccCCCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHH
Confidence 3444455566656788999999987664 333345677888899999888877643
No 80
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=23.96 E-value=30 Score=31.84 Aligned_cols=35 Identities=11% Similarity=0.113 Sum_probs=20.7
Q ss_pred CCCccEEEe----cCCchh----hhhhhccCCCcEEEecCChh
Q 019623 109 SPSCNFLVF----GLTHET----LLWKSLNFQGHTIFVDESEF 143 (338)
Q Consensus 109 raPCNfLVF----GLg~ds----llW~aLN~gGrTVFLEEd~~ 143 (338)
+.+--++|| |-|.-+ +.+..-..|-|++.+|-|+.
T Consensus 23 ~~~~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~~ 65 (349)
T 3ug7_A 23 KDGTKYIMFGGKGGVGKTTMSAATGVYLAEKGLKVVIVSTDPA 65 (349)
T ss_dssp SCSCEEEEEECSSSTTHHHHHHHHHHHHHHSSCCEEEEECCTT
T ss_pred cCCCEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 333344555 445544 33444455889999999874
No 81
>3ez9_A Para; DNA binding, winged-HTH, partition, biosynthetic protein; 2.80A {Salmonella enterica subsp} PDB: 3ezf_A
Probab=23.94 E-value=25 Score=32.51 Aligned_cols=51 Identities=10% Similarity=0.061 Sum_probs=28.2
Q ss_pred CCHHHHHHHHHHHhh-----cCCCccEEEe-----cCCchh----hhhhhc------cCCCcEEEecCChh
Q 019623 93 MTSAELTAVADALSR-----CSPSCNFLVF-----GLTHET----LLWKSL------NFQGHTIFVDESEF 143 (338)
Q Consensus 93 qt~~Ei~~~~~vL~~-----~raPCNfLVF-----GLg~ds----llW~aL------N~gGrTVFLEEd~~ 143 (338)
+|.+|+..+.+.... -..++..++| |.|.-+ |-|..- +.|-|++.+|=|+.
T Consensus 87 ~~~~~v~~~~~~~~~~~~r~~~~~~~vIav~s~KGGvGKTT~a~nLA~~LA~~g~~~~~g~rVlliD~D~~ 157 (403)
T 3ez9_A 87 LTIQNVIDIYAHRKIPKYRDIHKSPYVIFVVNLKGGVSKTVSTVTLAHALRVHQDLLRHDLRILVIDLDPQ 157 (403)
T ss_dssp BCHHHHHHHHHHTTCCCHHHHSCSCEEEEECCC--------CHHHHHHHHHSCGGGGGGCCCEEEEEESSS
T ss_pred cCHHHHHHHHHHhccCCcCCCCCCceEEEEEcCCCCchHHHHHHHHHHHHHhcchhhcCCCeEEEEeCCCC
Confidence 588888888766311 0235666655 445443 222221 56889999999873
No 82
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=23.68 E-value=1.3e+02 Score=25.83 Aligned_cols=58 Identities=12% Similarity=0.106 Sum_probs=43.4
Q ss_pred CCHHHHHHHHHHHhhcCCCccEEEecCCchhhh--hhhc-cCCCcEEEecCChhHHHHhhhc
Q 019623 93 MTSAELTAVADALSRCSPSCNFLVFGLTHETLL--WKSL-NFQGHTIFVDESEFLVQSFEKN 151 (338)
Q Consensus 93 qt~~Ei~~~~~vL~~~raPCNfLVFGLg~dsll--W~aL-N~gGrTVFLEEd~~~i~~~~~~ 151 (338)
+..+++..+...+.- +...++|.+|-|.-.+. ++.. +++++-+.+|-++..++.++++
T Consensus 96 ~~~~~~~~i~~~~~~-~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~ 156 (277)
T 1o54_A 96 VYPKDSSFIAMMLDV-KEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESN 156 (277)
T ss_dssp CCHHHHHHHHHHTTC-CTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHH
T ss_pred cCHHHHHHHHHHhCC-CCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHH
Confidence 677888888888764 77789999988765543 3333 5578888899999888877754
No 83
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=23.56 E-value=27 Score=32.72 Aligned_cols=34 Identities=9% Similarity=0.156 Sum_probs=21.9
Q ss_pred CCccEEEe----cCCchh----hhhhhc--cCCCcEEEecCChh
Q 019623 110 PSCNFLVF----GLTHET----LLWKSL--NFQGHTIFVDESEF 143 (338)
Q Consensus 110 aPCNfLVF----GLg~ds----llW~aL--N~gGrTVFLEEd~~ 143 (338)
.+..++|| |-|.-+ +.|..- ..|-|++.++-|+.
T Consensus 16 ~~~~i~~~~gkGGvGKTt~a~~lA~~la~~~~g~~vllid~D~~ 59 (348)
T 3io3_A 16 DSLKWIFVGGKGGVGKTTTSSSVAVQLALAQPNEQFLLISTDPA 59 (348)
T ss_dssp TTCSEEEEECSTTSSHHHHHHHHHHHHHHHCTTSCEEEEECCSS
T ss_pred CCcEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCCC
Confidence 45677777 444443 233333 67889999998864
No 84
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=23.53 E-value=28 Score=29.70 Aligned_cols=15 Identities=13% Similarity=0.335 Sum_probs=12.3
Q ss_pred ccccEEEEcCCCCCC
Q 019623 209 MDWDVVLVDGPSGYF 223 (338)
Q Consensus 209 ~~WDVImVDgP~Gy~ 223 (338)
-+.|+|+||+|.|..
T Consensus 143 ~~yD~viiD~pp~~~ 157 (267)
T 3k9g_A 143 YKYDYIVIDTNPSLD 157 (267)
T ss_dssp TTCSEEEEEECSSCS
T ss_pred cCCCEEEEECcCCcc
Confidence 358999999998763
No 85
>2woj_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; HET: ADP; 1.99A {Saccharomyces cerevisiae} PDB: 3h84_A 3zs8_A 3zs9_A* 3sja_A 3sjb_A 3sjc_A 3sjd_A* 3idq_A 3a36_A 3a37_A*
Probab=23.50 E-value=24 Score=32.84 Aligned_cols=33 Identities=6% Similarity=0.135 Sum_probs=20.8
Q ss_pred CccEEEe----cCCchhh----hhhhc--cCCCcEEEecCChh
Q 019623 111 SCNFLVF----GLTHETL----LWKSL--NFQGHTIFVDESEF 143 (338)
Q Consensus 111 PCNfLVF----GLg~dsl----lW~aL--N~gGrTVFLEEd~~ 143 (338)
+--++|| |.|.-+. -++.- ..|-|++.+|-|+.
T Consensus 17 ~~~i~v~sgKGGvGKTTvaanLA~~lA~~~~G~rVLLvD~D~~ 59 (354)
T 2woj_A 17 THKWIFVGGKGGVGKTTSSCSIAIQMALSQPNKQFLLISTDPA 59 (354)
T ss_dssp SCCEEEEEESTTSSHHHHHHHHHHHHHHHCTTSCEEEEECCSS
T ss_pred CcEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCCC
Confidence 4456677 5665542 33333 56778999999874
No 86
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=23.47 E-value=2.1e+02 Score=23.14 Aligned_cols=59 Identities=12% Similarity=-0.081 Sum_probs=43.3
Q ss_pred CCHHHHHHHHHHHhhc-CCCccEEEecCCchhhhhhhccCCCcEEEecCChhHHHHhhhc
Q 019623 93 MTSAELTAVADALSRC-SPSCNFLVFGLTHETLLWKSLNFQGHTIFVDESEFLVQSFEKN 151 (338)
Q Consensus 93 qt~~Ei~~~~~vL~~~-raPCNfLVFGLg~dsllW~aLN~gGrTVFLEEd~~~i~~~~~~ 151 (338)
.....+..+.+.|.+. ..+.++|-+|-|...+.......|.+.+-+|-++..++.++++
T Consensus 19 ~~~~~~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~s~~~~~~a~~~ 78 (246)
T 1y8c_A 19 DYKKWSDFIIEKCVENNLVFDDYLDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEAENK 78 (246)
T ss_dssp CHHHHHHHHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGGSSEEEEECSCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHCCCcEEEEECCHHHHHHHHHH
Confidence 4455566777788762 2678999999887776666666677888899999888877754
No 87
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=23.41 E-value=1.3e+02 Score=24.24 Aligned_cols=54 Identities=13% Similarity=-0.008 Sum_probs=42.0
Q ss_pred HHHHHHHHhhcCCCccEEEecCCchhhhhhhccCCCcEEEecCChhHHHHhhhc
Q 019623 98 LTAVADALSRCSPSCNFLVFGLTHETLLWKSLNFQGHTIFVDESEFLVQSFEKN 151 (338)
Q Consensus 98 i~~~~~vL~~~raPCNfLVFGLg~dsllW~aLN~gGrTVFLEEd~~~i~~~~~~ 151 (338)
...+..++...+++..+|-+|-|.........+.|.+.+-+|-++..++.++++
T Consensus 31 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~ 84 (211)
T 3e23_A 31 SATLTKFLGELPAGAKILELGCGAGYQAEAMLAAGFDVDATDGSPELAAEASRR 84 (211)
T ss_dssp CHHHHHHHTTSCTTCEEEESSCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred hHHHHHHHHhcCCCCcEEEECCCCCHHHHHHHHcCCeEEEECCCHHHHHHHHHh
Confidence 445666676666778999999888777766666788888899999988877765
No 88
>2zr9_A Protein RECA, recombinase A; recombination, RECA mutants, DNA-repair, ATP-binding, DNA DA recombination, DNA repair, DNA-binding; HET: DTP; 2.50A {Mycobacterium smegmatis str} PDB: 2zr0_A* 2zra_A* 2zrb_A 2zrm_A* 1ubc_A* 1ubf_A* 1ubg_A* 1ube_A* 2g88_A* 2odw_A* 2oe2_A 2oep_A* 2oes_A 2ofo_A 2zr7_A 2odn_A* 2zrn_A 2zro_A* 2zrp_A* 2zre_A* ...
Probab=23.22 E-value=42 Score=31.21 Aligned_cols=62 Identities=15% Similarity=0.408 Sum_probs=31.7
Q ss_pred ccEEEEcCCCCCCC--CCCCCchhH--------hh---HHHHHhhccCCCCcceEEEecCChhHHHHh----------hh
Q 019623 211 WDVVLVDGPSGYFP--RAPGRMAPI--------FT---ASVLARSKKAGRKKTHVFVHDFNREVERVC----------SE 267 (338)
Q Consensus 211 WDVImVDgP~Gy~p--eaPGRM~aI--------yT---AavmARar~~g~~~TdVfVHDvdR~VE~~~----------s~ 267 (338)
=|+|+||-+....+ +-.|+|+-. .. -.+....++.| .|=||+..+.+.++..| +.
T Consensus 140 ~~lIVIDsl~~l~~~~e~~~~~gd~~~~~q~r~~~~~l~~L~~~a~~~~--~tVI~inh~~~~~~~~~~~p~~~~gg~~l 217 (349)
T 2zr9_A 140 LDIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGALNNSG--TTAIFINELREKIGVMFGSPETTTGGKAL 217 (349)
T ss_dssp CSEEEEECGGGCCCHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHT--CEEEEEEECC-----------CCSSHHHH
T ss_pred CCEEEEcChHhhcchhhhccccccchhhHHHHHHHHHHHHHHHHHHHhC--CEEEEEeccccccCcccCCCcccCCchHh
Confidence 48999999998875 333444321 11 11211123333 68899999999888766 35
Q ss_pred hhccccc
Q 019623 268 EFLCEEN 274 (338)
Q Consensus 268 EFLC~~n 274 (338)
+|.|+--
T Consensus 218 ~~~ad~~ 224 (349)
T 2zr9_A 218 KFYASVR 224 (349)
T ss_dssp HHHCSEE
T ss_pred hhccceE
Confidence 7888753
No 89
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=22.98 E-value=1.6e+02 Score=22.60 Aligned_cols=55 Identities=9% Similarity=0.013 Sum_probs=39.8
Q ss_pred HHHHHHHHHHhhcCCCccEEEecCCchhhhhhhccCCCcEEEecCChhHHHHhhhc
Q 019623 96 AELTAVADALSRCSPSCNFLVFGLTHETLLWKSLNFQGHTIFVDESEFLVQSFEKN 151 (338)
Q Consensus 96 ~Ei~~~~~vL~~~raPCNfLVFGLg~dsllW~aLN~gGrTVFLEEd~~~i~~~~~~ 151 (338)
.....+.+.+.. +.+.++|-+|-|.-.+.-.....+++.+-+|-++..++.++++
T Consensus 39 ~~~~~l~~~~~~-~~~~~vLdiG~G~G~~~~~~~~~~~~v~~~D~~~~~~~~a~~~ 93 (194)
T 1dus_A 39 KGTKILVENVVV-DKDDDILDLGCGYGVIGIALADEVKSTTMADINRRAIKLAKEN 93 (194)
T ss_dssp HHHHHHHHHCCC-CTTCEEEEETCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHH
T ss_pred hHHHHHHHHccc-CCCCeEEEeCCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHHH
Confidence 455666677754 6677999998877666555555578888889899888877644
No 90
>3ez2_A Plasmid partition protein A; type IA, DNA binding, winged-HTH, DNA bindin; HET: ADP EPE; 2.05A {Escherichia coli} PDB: 3ez6_A* 3ez7_A
Probab=22.27 E-value=29 Score=31.97 Aligned_cols=51 Identities=8% Similarity=0.074 Sum_probs=32.8
Q ss_pred CCHHHHHHHHHHHh-----hcCCCccEEEe-----cCCchh----hhhhhc------cCCCcEEEecCChh
Q 019623 93 MTSAELTAVADALS-----RCSPSCNFLVF-----GLTHET----LLWKSL------NFQGHTIFVDESEF 143 (338)
Q Consensus 93 qt~~Ei~~~~~vL~-----~~raPCNfLVF-----GLg~ds----llW~aL------N~gGrTVFLEEd~~ 143 (338)
+|.++|..+.+.+. .-..++..++| |-|.-+ |-|..- +.|-|++.+|=|+.
T Consensus 84 ~~~~~i~~~~~~~~~~~~~~~~~~~~vIav~s~KGGvGKTT~a~nLA~~La~~~~~~~~g~rVlliD~D~q 154 (398)
T 3ez2_A 84 MSIQNIIDIYEHRGVPKYRDRYSEAYVIFISNLKGGVSKTVSTVSLAHAMRAHPHLLMEDLRILVIDLDPQ 154 (398)
T ss_dssp BCHHHHHHHHHHTTCCCGGGTCCSCEEEEECCSSSSSSHHHHHHHHHHHHHHCTTTGGGCCCEEEEEECTT
T ss_pred CCHHHHHHHHHHhcccccCcCCCCCeEEEEEeCCCCccHHHHHHHHHHHHHhcchhhcCCCeEEEEeCCCC
Confidence 48999998888862 11234666666 455544 223222 46889999999974
No 91
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=21.81 E-value=1.5e+02 Score=25.00 Aligned_cols=58 Identities=12% Similarity=0.114 Sum_probs=42.5
Q ss_pred CCHHHHHHHHHHHhhcCCCccEEEecCCchhhhh--hh-ccCCCcEEEecCChhHHHHhhhc
Q 019623 93 MTSAELTAVADALSRCSPSCNFLVFGLTHETLLW--KS-LNFQGHTIFVDESEFLVQSFEKN 151 (338)
Q Consensus 93 qt~~Ei~~~~~vL~~~raPCNfLVFGLg~dsllW--~a-LN~gGrTVFLEEd~~~i~~~~~~ 151 (338)
+..+++..+...+.- +...++|..|-|.-.+.- +. ++++++-+-+|-++..++.++++
T Consensus 83 ~~~~~~~~i~~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~ 143 (280)
T 1i9g_A 83 IYPKDAAQIVHEGDI-FPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRN 143 (280)
T ss_dssp CCHHHHHHHHHHTTC-CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHH
T ss_pred ecHHHHHHHHHHcCC-CCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHH
Confidence 567778777777763 777899999887655433 33 34578888899999888877754
No 92
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=21.78 E-value=1.8e+02 Score=23.56 Aligned_cols=59 Identities=19% Similarity=0.126 Sum_probs=44.0
Q ss_pred CCHHHHHHHHHHHhhcCCCccEEEecCCchhhhhhhccCC--CcEEEecCChhHHHHhhhcC
Q 019623 93 MTSAELTAVADALSRCSPSCNFLVFGLTHETLLWKSLNFQ--GHTIFVDESEFLVQSFEKNH 152 (338)
Q Consensus 93 qt~~Ei~~~~~vL~~~raPCNfLVFGLg~dsllW~aLN~g--GrTVFLEEd~~~i~~~~~~~ 152 (338)
.....+..+.+.+.. ..+.++|=+|-|.-.+.......+ .+.+-+|-|+..++.++++.
T Consensus 13 ~~~~~~~~l~~~l~~-~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~ 73 (217)
T 3jwh_A 13 LNQQRMNGVVAALKQ-SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERL 73 (217)
T ss_dssp HHHHHHHHHHHHHHH-TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh-cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHH
Confidence 556677788888876 678899999887766655544443 57788888888888887653
No 93
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=21.25 E-value=63 Score=23.43 Aligned_cols=43 Identities=9% Similarity=0.122 Sum_probs=21.8
Q ss_pred CCCcEEEecCChhHHHHhhhcCCCceeEEeEecccccchHHHHHHHH
Q 019623 131 FQGHTIFVDESEFLVQSFEKNHPDFEIYDVQYTTKVEEMNPTLHAVR 177 (338)
Q Consensus 131 ~gGrTVFLEEd~~~i~~~~~~~P~leay~V~Y~T~v~ea~~LL~~~r 177 (338)
.+-+-+.+|+|+.....++...-. .-|.|.. +....+.++..+
T Consensus 5 ~~~~ilivdd~~~~~~~l~~~L~~-~g~~v~~---~~~~~~a~~~l~ 47 (132)
T 3lte_A 5 QSKRILVVDDDQAMAAAIERVLKR-DHWQVEI---AHNGFDAGIKLS 47 (132)
T ss_dssp --CEEEEECSCHHHHHHHHHHHHH-TTCEEEE---ESSHHHHHHHHH
T ss_pred CCccEEEEECCHHHHHHHHHHHHH-CCcEEEE---eCCHHHHHHHHH
Confidence 345677888888876655432211 2245543 344455555444
No 94
>1xp8_A RECA protein, recombinase A; recombination, radioresistance, DNA-repair, ATPase, DNA-BIND protein, DNA binding protein; HET: AGS; 2.50A {Deinococcus radiodurans} SCOP: c.37.1.11 d.48.1.1
Probab=21.00 E-value=1.2e+02 Score=28.56 Aligned_cols=54 Identities=20% Similarity=0.303 Sum_probs=23.9
Q ss_pred ccEEEEcCCCCCCC--CCCCCchh-----------HhhHHHHHhhccCCCCcceEEEecCChhHHHHhh
Q 019623 211 WDVVLVDGPSGYFP--RAPGRMAP-----------IFTASVLARSKKAGRKKTHVFVHDFNREVERVCS 266 (338)
Q Consensus 211 WDVImVDgP~Gy~p--eaPGRM~a-----------IyTAavmARar~~g~~~TdVfVHDvdR~VE~~~s 266 (338)
-|+|+||....+.+ +-.|+|+. -+.-.+..-+++. +.+=|++..+.|.++..|.
T Consensus 153 ~~lVVIDsl~~l~~~~e~~g~~gd~~~~~~~r~~~~~lr~L~~~a~~~--~~~VI~~nq~~~~~~~~fg 219 (366)
T 1xp8_A 153 IDVVVVDSVAALTPRAEIEGDMGDSLPGLQARLMSQALRKLTAILSKT--GTAAIFINQVREKIGVMYG 219 (366)
T ss_dssp CSEEEEECTTTCCCSTTC--------CCHHHHHHHHHHHHHHHHHTTT--CCEEEEEEEC---------
T ss_pred CCEEEEeChHHhccccccccccccchhhHHHHHHHHHHHHHHHHHHHc--CCEEEEEEecccccCcccC
Confidence 48999999998875 33455532 1111111112333 3677999999999987663
No 95
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=20.96 E-value=1.4e+02 Score=24.22 Aligned_cols=56 Identities=14% Similarity=0.078 Sum_probs=40.1
Q ss_pred HHHHHHHHHhhcCCCccEEEecCCchhhhhhhccCCC-cEEEecCChhHHHHhhhcCC
Q 019623 97 ELTAVADALSRCSPSCNFLVFGLTHETLLWKSLNFQG-HTIFVDESEFLVQSFEKNHP 153 (338)
Q Consensus 97 Ei~~~~~vL~~~raPCNfLVFGLg~dsllW~aLN~gG-rTVFLEEd~~~i~~~~~~~P 153 (338)
+...+.+.+.. .++.++|-+|-|...........|. +.+-+|-++..++.++++.+
T Consensus 31 ~~~~l~~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~ 87 (243)
T 3bkw_A 31 EWPALRAMLPE-VGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGP 87 (243)
T ss_dssp THHHHHHHSCC-CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSC
T ss_pred hHHHHHHhccc-cCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhcc
Confidence 34456677764 5678999998877666555555555 78888999988888876654
No 96
>3hh2_A Growth/differentiation factor 8; protein-protein complex, TB domain, cystine knot motif, TGF- fold, disulfide linked dimer, CLE PAIR of basic residues, cytokine; HET: CIT; 2.15A {Mus musculus} SCOP: g.17.1.0 PDB: 3sek_B*
Probab=20.26 E-value=21 Score=28.74 Aligned_cols=38 Identities=21% Similarity=0.391 Sum_probs=27.0
Q ss_pred CCCCccccccccccccccccCCCcccccccccEEEEcCCCCCCC
Q 019623 181 KDDCRPMQNLLFSDCKLAINDMPNHVYDMDWDVVLVDGPSGYFP 224 (338)
Q Consensus 181 ~~~C~p~~~l~~S~CkLAL~~LP~evYe~~WDVImVDgP~Gy~p 224 (338)
+-+|.+.. ....|.+ +.|-=.|=|+-||.|+ +|+||.+
T Consensus 3 ~~~C~~~~--~~~~C~r--~~l~V~F~dlGWdWIi--aP~~y~a 40 (109)
T 3hh2_A 3 GLDCDEHS--TESRCCR--YPLTVDFEAFGWDWII--APKRYKA 40 (109)
T ss_dssp SCBCCTTC--CCCBSEE--ECCEEEHHHHTCTTEE--ECSEEEC
T ss_pred cccCCCCC--CCCCcEE--EEEEEeHHHcCCCeEe--CCCcccc
Confidence 34676542 2356776 5788888899999877 6999954
Done!