BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019626
(338 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q93YP7|4HPT_ARATH 4-hydroxybenzoate polyprenyltransferase, mitochondrial
OS=Arabidopsis thaliana GN=PPT1 PE=2 SV=1
Length = 407
Score = 343 bits (880), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 201/317 (63%), Positives = 230/317 (72%), Gaps = 28/317 (8%)
Query: 31 SNPILNPKLNPHIAKL----TNHDRWVP----NSEQNFRYVWVAS-ICTTPSQSSV---- 77
SNP+ NP N+ W + E+ F W IC S SSV
Sbjct: 37 SNPVTTHYTNPFTKCYPSWNDNYQVWSKGRELHQEKFFGVGWNYRLICGMSSSSSVLEGK 96
Query: 78 ------EKETSSSNEKSSWIDLYLPRQARAYAKLARLDKPIGTWLLAWPCMWSITMAAPR 131
EK +++SWIDLYLP + R YAKLARLDKPIGTWLLAWPCMWSI +AA
Sbjct: 97 PKKDDKEKSDGVVVKEASWIDLYLPEEVRGYAKLARLDKPIGTWLLAWPCMWSIALAADP 156
Query: 132 GHFPDFKMMALFGCGALLLRGAGCTVNDLLDRDIDNMVERTRLRPVASGLLTPFQGLSFL 191
G P FK MALFGCGALLLRGAGCT+NDLLD+DID V+RT+LRP+ASGLLTPFQG+ FL
Sbjct: 157 GSLPSFKYMALFGCGALLLRGAGCTINDLLDQDIDTKVDRTKLRPIASGLLTPFQGIGFL 216
Query: 192 GFQLLLGLGILLQLNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAA 251
G QLLLGLGILLQLNN+SR+LGASSLLLVFSYPLMKRFTFWPQA+LGLT NWGALLGW A
Sbjct: 217 GLQLLLGLGILLQLNNYSRVLGASSLLLVFSYPLMKRFTFWPQAFLGLTINWGALLGWTA 276
Query: 252 VKGSLDLAVVFPMYISGVFWTL---------DKEDDLKVGVKSTALRFGDSSKEWTTGFG 302
VKGS+ ++V P+Y+SGV WTL DKEDD+KVGVKSTALRFGD++K W TGFG
Sbjct: 277 VKGSIAPSIVLPLYLSGVCWTLVYDTIYAHQDKEDDVKVGVKSTALRFGDNTKLWLTGFG 336
Query: 303 IACISSLALSGYNADIG 319
A I LALSG++AD+G
Sbjct: 337 TASIGFLALSGFSADLG 353
>sp|Q8W404|PGT2_LITER 4-hydroxybenzoate geranyltransferase 2 OS=Lithospermum
erythrorhizon GN=PGT-2 PE=1 SV=1
Length = 306
Score = 272 bits (696), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 134/268 (50%), Positives = 184/268 (68%), Gaps = 12/268 (4%)
Query: 76 SVEKETSSSNEKSSWIDLYLPRQARAYAKLARLDKPIGTWLLAWPCMWSITMAAPRGHFP 135
S ++ ++ SWI++YLP++ R YA LARLDKPIG+WLLAWP WS+ + A G P
Sbjct: 2 SSKQTQLKKGKQPSWIEIYLPKEVRPYAHLARLDKPIGSWLLAWPAFWSVALIADLGSLP 61
Query: 136 DFKMMALFGCGALLLRGAGCTVNDLLDRDIDNMVERTRLRPVASGLLTPFQGLSFLGFQL 195
KM+A+FG A+ +RGAGCT+ND DRD D VERT+ RP+ASG ++P +GL +L FQL
Sbjct: 62 --KMLAIFGWWAVWIRGAGCTINDYFDRDFDKKVERTKSRPLASGAVSPAKGLWWLAFQL 119
Query: 196 LLGLGILLQLNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGS 255
+GLG+L Q N + L + VF+YPLMKR T+WPQA+LG+ +WGALLG +A+KGS
Sbjct: 120 FIGLGVLYQFNILTLALAIVHVPFVFAYPLMKRITYWPQAFLGVMISWGALLGSSALKGS 179
Query: 256 LDLAVVFPMYISGVFWTL---------DKEDDLKVGVKSTALRFGDSSKEWTTGFGIACI 306
+ ++ +P+YIS FWTL DK DD K G+KSTALRFGD++K W T FGI CI
Sbjct: 180 VVPSIAYPLYISSFFWTLVYDTIYAHQDKVDDAKAGIKSTALRFGDATKIWITWFGIGCI 239
Query: 307 SSLALSGYNADIGI-YLLLVVFCSSRLL 333
+L L G+ +IG+ Y + + + +L+
Sbjct: 240 GALLLGGFIVNIGLPYYVFLAIATGQLI 267
>sp|Q499N4|COQ2_RAT 4-hydroxybenzoate polyprenyltransferase, mitochondrial OS=Rattus
norvegicus GN=Coq2 PE=2 SV=1
Length = 374
Score = 271 bits (693), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 135/227 (59%), Positives = 168/227 (74%), Gaps = 9/227 (3%)
Query: 96 PRQARAYAKLARLDKPIGTWLLAWPCMWSITMAAPRGHFPDFKMMALFGCGALLLRGAGC 155
PR + Y +L RLDKPIGTWLL PC WSI +AA G FPD+ M++LFG GA+L+RGAGC
Sbjct: 68 PRPLQPYLRLMRLDKPIGTWLLYLPCTWSIGLAADPGCFPDWYMLSLFGTGAILMRGAGC 127
Query: 156 TVNDLLDRDIDNMVERTRLRPVASGLLTPFQGLSFLGFQLLLGLGILLQLNNFSRILGAS 215
T+ND+ DRD D VERT RP+A+G ++ FQ FLG QL L LG+LL LN +S +GA+
Sbjct: 128 TINDMWDRDFDKKVERTANRPIAAGDISAFQSFVFLGAQLTLALGVLLHLNYYSIAMGAA 187
Query: 216 SLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTL-- 273
SLLLV +YPLMKR TFWPQ LGLTFNWGALLGW+AVKGS D AV P+Y SGV WTL
Sbjct: 188 SLLLVVTYPLMKRVTFWPQLALGLTFNWGALLGWSAVKGSCDPAVCLPLYFSGVMWTLIY 247
Query: 274 -------DKEDDLKVGVKSTALRFGDSSKEWTTGFGIACISSLALSG 313
DK+DD +G+KSTAL F +++K+W +GFG+A + +L+L G
Sbjct: 248 DTIYAHQDKKDDALIGLKSTALLFRENTKQWLSGFGVAMVGALSLVG 294
>sp|Q8W405|PGT1_LITER 4-hydroxybenzoate geranyltransferase 1 OS=Lithospermum
erythrorhizon GN=PGT-1 PE=1 SV=1
Length = 307
Score = 270 bits (689), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 132/268 (49%), Positives = 184/268 (68%), Gaps = 12/268 (4%)
Query: 76 SVEKETSSSNEKSSWIDLYLPRQARAYAKLARLDKPIGTWLLAWPCMWSITMAAPRGHFP 135
S ++ ++ SWI++YLP++ R YA LARLDKPIG+WLLAWP WS+ +AA P
Sbjct: 3 SSKQTQLKKGKQPSWIEMYLPKEVRPYAHLARLDKPIGSWLLAWPAFWSVALAADLESLP 62
Query: 136 DFKMMALFGCGALLLRGAGCTVNDLLDRDIDNMVERTRLRPVASGLLTPFQGLSFLGFQL 195
KM+A+FG A+ +RGAGCT+ND DR+ D VERT+ RP+ASG ++P QGL +L FQL
Sbjct: 63 --KMLAIFGWWAVWIRGAGCTINDYFDRNFDKKVERTKSRPLASGAVSPAQGLWWLAFQL 120
Query: 196 LLGLGILLQLNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGS 255
+GLG+L Q N + L + VF+YPLMKR T+WPQA+LG+ +WGALLG +A+KGS
Sbjct: 121 FIGLGVLYQFNVLTLALAIVHVPFVFAYPLMKRITYWPQAFLGVMISWGALLGSSALKGS 180
Query: 256 LDLAVVFPMYISGVFWTL---------DKEDDLKVGVKSTALRFGDSSKEWTTGFGIACI 306
+ ++ +P+YIS FWTL DK DD K G+KSTALRFGD++K W + FG+ CI
Sbjct: 181 VVPSIAYPLYISSFFWTLVYDTIYAHQDKVDDAKAGIKSTALRFGDATKMWISWFGVGCI 240
Query: 307 SSLALSGYNADIGI-YLLLVVFCSSRLL 333
++L + G +IG+ Y + V + +L+
Sbjct: 241 AALVIGGLILNIGLPYYVFVAIATGQLV 268
>sp|Q9VHS7|COQ2_DROME 4-hydroxybenzoate polyprenyltransferase, mitochondrial
OS=Drosophila melanogaster GN=Coq2 PE=2 SV=1
Length = 392
Score = 268 bits (685), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 136/261 (52%), Positives = 182/261 (69%), Gaps = 19/261 (7%)
Query: 68 ICTTPSQSSVE--KETSSSNEKSSWIDLYLPRQARAYAKLARLDKPIGTWLLAWPCMWSI 125
+C+ S ++ E K+ + E L A+ YA+L R+D+PIGT+LL WPC WSI
Sbjct: 52 VCSRSSSTATEPVKQQTPLQE--------LVSAAKPYAQLMRIDRPIGTYLLFWPCAWSI 103
Query: 126 TMAAPRGHFPDFKMMALFGCGALLLRGAGCTVNDLLDRDIDNMVERTRLRPVASGLLTPF 185
++A G +PD M+ LFG GAL++RGAGCT+NDL D+DID VERTRLRP+ASG ++ F
Sbjct: 104 ALSADAGCWPDLTMLGLFGTGALIMRGAGCTINDLWDKDIDAKVERTRLRPLASGQISQF 163
Query: 186 QGLSFLGFQLLLGLGILLQLNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGA 245
+ FL QL LGL +L+QLN S +LGASSL LV +YPLMKR T+WPQ LG+ FNWGA
Sbjct: 164 DAIVFLSAQLSLGLLVLVQLNWQSILLGASSLGLVITYPLMKRVTYWPQLVLGMAFNWGA 223
Query: 246 LLGWAAVKGSLDLAVVFPMYISGVFWTL---------DKEDDLKVGVKSTALRFGDSSKE 296
LLGW A +GS++LA P+Y+SGV WT+ DK DDL++GVKSTALRFG+++K
Sbjct: 224 LLGWCATQGSVNLAACLPLYLSGVCWTIVYDTIYAHQDKLDDLQIGVKSTALRFGENTKV 283
Query: 297 WTTGFGIACISSLALSGYNAD 317
W +GF A ++ L+ +G+ D
Sbjct: 284 WLSGFTAAMLTGLSAAGWACD 304
>sp|Q66JT7|COQ2_MOUSE 4-hydroxybenzoate polyprenyltransferase, mitochondrial OS=Mus
musculus GN=Coq2 PE=2 SV=2
Length = 374
Score = 267 bits (683), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 133/229 (58%), Positives = 170/229 (74%), Gaps = 9/229 (3%)
Query: 96 PRQARAYAKLARLDKPIGTWLLAWPCMWSITMAAPRGHFPDFKMMALFGCGALLLRGAGC 155
PR + Y +L RLDKPIGTWLL PC WSI +AA G FPD+ M++LFG GA+L+RGAGC
Sbjct: 68 PRPLQPYLRLMRLDKPIGTWLLYLPCTWSIGLAADPGCFPDWYMLSLFGTGAILMRGAGC 127
Query: 156 TVNDLLDRDIDNMVERTRLRPVASGLLTPFQGLSFLGFQLLLGLGILLQLNNFSRILGAS 215
T+ND+ DRD D V RT RP+A+G ++ FQ FLG QL L LG+LL LN +S +GA+
Sbjct: 128 TINDMWDRDFDKKVTRTANRPIAAGDISTFQSFVFLGGQLTLALGVLLCLNYYSIAMGAA 187
Query: 216 SLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTL-- 273
SLLLV +YPL+KR TFWPQ LGLTFNWGALLGW+AVKGS D AV P+Y SGV WTL
Sbjct: 188 SLLLVVTYPLVKRITFWPQLALGLTFNWGALLGWSAVKGSCDPAVCLPLYFSGVMWTLIY 247
Query: 274 -------DKEDDLKVGVKSTALRFGDSSKEWTTGFGIACISSLALSGYN 315
DK+DD +G+KSTAL F +++++W +GFG+A +++L+L+G N
Sbjct: 248 DTIYAHQDKKDDALIGLKSTALLFQENTRQWLSGFGVAMVAALSLAGAN 296
>sp|Q96H96|COQ2_HUMAN 4-hydroxybenzoate polyprenyltransferase, mitochondrial OS=Homo
sapiens GN=COQ2 PE=1 SV=1
Length = 371
Score = 265 bits (677), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 132/230 (57%), Positives = 168/230 (73%), Gaps = 9/230 (3%)
Query: 96 PRQARAYAKLARLDKPIGTWLLAWPCMWSITMAAPRGHFPDFKMMALFGCGALLLRGAGC 155
PR + Y +L RLDKPIGTWLL PC WSI +AA G FPD+ M++LFG GA+L+RGAGC
Sbjct: 68 PRPLQPYLRLMRLDKPIGTWLLYLPCTWSIGLAAEPGCFPDWYMLSLFGTGAILMRGAGC 127
Query: 156 TVNDLLDRDIDNMVERTRLRPVASGLLTPFQGLSFLGFQLLLGLGILLQLNNFSRILGAS 215
T+ND+ D+D D V RT RP+A+G ++ FQ FLG QL L LG+LL LN +S LGA
Sbjct: 128 TINDMWDQDYDKKVTRTANRPIAAGDISTFQSFVFLGGQLTLALGVLLCLNYYSIALGAG 187
Query: 216 SLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTL-- 273
SLLLV +YPLMKR ++WPQ LGLTFNWGALLGW+A+KGS D +V P+Y SGV WTL
Sbjct: 188 SLLLVITYPLMKRISYWPQLALGLTFNWGALLGWSAIKGSCDPSVCLPLYFSGVMWTLIY 247
Query: 274 -------DKEDDLKVGVKSTALRFGDSSKEWTTGFGIACISSLALSGYNA 316
DK DD+ +G+KSTALRFG+++K W +GF +A + +L+L G N+
Sbjct: 248 DTIYAHQDKRDDVLIGLKSTALRFGENTKPWLSGFSVAMLGALSLVGVNS 297
>sp|Q298G6|COQ2_DROPS 4-hydroxybenzoate polyprenyltransferase, mitochondrial
OS=Drosophila pseudoobscura pseudoobscura GN=coq2 PE=3
SV=1
Length = 397
Score = 263 bits (672), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 128/227 (56%), Positives = 168/227 (74%), Gaps = 9/227 (3%)
Query: 100 RAYAKLARLDKPIGTWLLAWPCMWSITMAAPRGHFPDFKMMALFGCGALLLRGAGCTVND 159
+ YA+L R+D+PIGT+LL WPC WSI ++A G +PD M+ LFG GAL++RGAGCT+ND
Sbjct: 84 KPYAQLMRIDRPIGTYLLFWPCAWSIALSADAGCWPDLTMLGLFGTGALIMRGAGCTIND 143
Query: 160 LLDRDIDNMVERTRLRPVASGLLTPFQGLSFLGFQLLLGLGILLQLNNFSRILGASSLLL 219
L D+DID VERTR RP+ASG ++ F + FL QL LGL +L+QLN S +LGASSL L
Sbjct: 144 LWDKDIDAKVERTRTRPLASGQISQFDAIVFLSAQLSLGLLVLVQLNWQSILLGASSLGL 203
Query: 220 VFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTL------ 273
V +YPLMKR T+WPQ LG+ FNWGALLGW A +GS++LA P+Y+SGV WT+
Sbjct: 204 VITYPLMKRVTYWPQLVLGMAFNWGALLGWCATQGSVNLAACLPLYLSGVCWTIVYDTIY 263
Query: 274 ---DKEDDLKVGVKSTALRFGDSSKEWTTGFGIACISSLALSGYNAD 317
DK DDL++GVKSTALRFG+++K W +GF A ++ L+ +G+ D
Sbjct: 264 AHQDKLDDLQIGVKSTALRFGENTKVWLSGFTAAMLTGLSTAGWACD 310
>sp|Q2KIQ4|COQ2_BOVIN 4-hydroxybenzoate polyprenyltransferase, mitochondrial OS=Bos
taurus GN=COQ2 PE=2 SV=1
Length = 371
Score = 258 bits (660), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 130/230 (56%), Positives = 166/230 (72%), Gaps = 9/230 (3%)
Query: 96 PRQARAYAKLARLDKPIGTWLLAWPCMWSITMAAPRGHFPDFKMMALFGCGALLLRGAGC 155
PR + Y +L RLDKPIGTWLL PC WSI +AA G PD+ M++LFG GA+L+RGAGC
Sbjct: 68 PRPLQPYLRLMRLDKPIGTWLLYLPCTWSIGLAADPGCLPDWYMLSLFGTGAVLMRGAGC 127
Query: 156 TVNDLLDRDIDNMVERTRLRPVASGLLTPFQGLSFLGFQLLLGLGILLQLNNFSRILGAS 215
T+ND+ DRD D V RT RP+A+G ++ F+ FLG QL L LG+LL LN +S LGA+
Sbjct: 128 TINDMWDRDYDKKVTRTASRPIAAGDISTFRSFVFLGGQLTLALGVLLCLNYYSIALGAA 187
Query: 216 SLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTL-- 273
SLLLV +YPLMKR T+WPQ LGLTFNWGALLGW+AVKGS D +V P+Y SG+ WTL
Sbjct: 188 SLLLVTTYPLMKRITYWPQLALGLTFNWGALLGWSAVKGSCDPSVCLPLYFSGIMWTLIY 247
Query: 274 -------DKEDDLKVGVKSTALRFGDSSKEWTTGFGIACISSLALSGYNA 316
DK+DD +G+KSTAL F + +K+W +GF +A + +L+L G N+
Sbjct: 248 DTIYAHQDKKDDALIGLKSTALLFREDTKKWLSGFSVAMLGALSLVGVNS 297
>sp|Q16QL3|COQ2_AEDAE 4-hydroxybenzoate polyprenyltransferase, mitochondrial OS=Aedes
aegypti GN=coq2 PE=3 SV=1
Length = 441
Score = 247 bits (630), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 123/221 (55%), Positives = 156/221 (70%), Gaps = 9/221 (4%)
Query: 102 YAKLARLDKPIGTWLLAWPCMWSITMAAPRGHFPDFKMMALFGCGALLLRGAGCTVNDLL 161
YA+L R+D+PIG+WLL WPC WSI ++AP G +PD + LFG GA ++RGAGCT+ND+
Sbjct: 119 YARLMRIDRPIGSWLLFWPCGWSIALSAPAGCWPDLWTLTLFGAGAFIMRGAGCTINDMW 178
Query: 162 DRDIDNMVERTRLRPVASGLLTPFQGLSFLGFQLLLGLGILLQLNNFSRILGASSLLLVF 221
DRDID V RTR RP+ +G LT FLG QL +GL ILL+LN +S +LGASSL LV
Sbjct: 179 DRDIDGKVARTRNRPLVAGELTSADAWFFLGAQLGVGLLILLELNWYSIVLGASSLGLVI 238
Query: 222 SYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTL-------- 273
YPLMKR T WPQ LG+TFNWGALLGW+A +GS+ + P+Y++GV WT+
Sbjct: 239 IYPLMKRITHWPQLVLGMTFNWGALLGWSATQGSVMWSACLPLYVAGVCWTIVYDTIYAH 298
Query: 274 -DKEDDLKVGVKSTALRFGDSSKEWTTGFGIACISSLALSG 313
DK DD +G+KSTA+RFGD++K W +GF A I L SG
Sbjct: 299 QDKVDDALLGIKSTAIRFGDNTKLWLSGFSTAMIGGLVASG 339
>sp|Q54U71|COQ2_DICDI 4-hydroxybenzoate polyprenyltransferase, mitochondrial
OS=Dictyostelium discoideum GN=coq2 PE=3 SV=1
Length = 463
Score = 234 bits (597), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 122/257 (47%), Positives = 168/257 (65%), Gaps = 12/257 (4%)
Query: 88 SSWIDLYLPRQARAYAKLARLDKPIGTWLLAWPCMWSITMAAPRGHFPDFKMMALFGCGA 147
+ WI + P + Y +L+R+DKPIG WLL +PC WSI++AAP G FPD K M +FG GA
Sbjct: 158 NDWISKF-PNSVQPYLRLSRVDKPIGVWLLLYPCCWSISLAAPAGSFPDLKTMLVFGIGA 216
Query: 148 LLLRGAGCTVNDLLDRDIDNMVERTRLRPVASGLLTPFQGLSFLGFQLLLGLGILL-QLN 206
++R AGC +ND+ D D+ VERT+ RP+AS LT Q L FLG QLL G++L LN
Sbjct: 217 YVMRSAGCVINDMADYKFDSKVERTKTRPIASKQLTHKQSLIFLGGQLLASFGLILSSLN 276
Query: 207 NFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYI 266
++ L ASSL +V YP MKRFT++PQ LGL FNWGAL G++A+ GS + ++V P+Y+
Sbjct: 277 YYTIALCASSLPIVVLYPFMKRFTYYPQFVLGLAFNWGALAGYSAIAGSCNWSIVAPLYL 336
Query: 267 SGVFWTL---------DKEDDLKVGVKSTALRFGDSSKEWTTGFGIACISSLALSGYNAD 317
+G+ WT+ DK DD+ VGVKSTAL+F + S+ + F IS + L+G A+
Sbjct: 337 AGISWTMVYDTIYAHQDKRDDILVGVKSTALKFAEKSRIILSVFSGLVISGMFLTGIAAN 396
Query: 318 IGI-YLLLVVFCSSRLL 333
+ + Y L CSS L+
Sbjct: 397 MPLFYYLGTAACSSHLI 413
>sp|Q8I7J4|COQ2_CAEEL 4-hydroxybenzoate polyprenyltransferase, mitochondrial
OS=Caenorhabditis elegans GN=coq-2 PE=2 SV=2
Length = 356
Score = 232 bits (591), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 123/231 (53%), Positives = 151/231 (65%), Gaps = 9/231 (3%)
Query: 96 PRQARAYAKLARLDKPIGTWLLAWPCMWSITMAAPRGHFPDFKMMALFGCGALLLRGAGC 155
P + Y +L R+DKPIGTWLL WPC WSI MA P G P M++LFG GA L+R AGC
Sbjct: 59 PPNLKPYLQLMRVDKPIGTWLLYWPCTWSIAMATPAGQLPSIYMLSLFGAGAFLMRSAGC 118
Query: 156 TVNDLLDRDIDNMVERTRLRPVASGLLTPFQGLSFLGFQLLLGLGILLQLNNFSRILGAS 215
+NDL D+D D VERT+LRP+A G LT Q + L L L ILLQLN +S +GAS
Sbjct: 119 VINDLWDKDFDKKVERTKLRPLACGSLTEKQAIGLLAGLLSSSLAILLQLNWYSVAVGAS 178
Query: 216 SLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTL-- 273
S+ LV YPL KRFT+WPQ LGLTFNWGALLGW A+KG L + F MY + + WTL
Sbjct: 179 SMALVVGYPLAKRFTYWPQFVLGLTFNWGALLGWCALKGDLSSSAPFWMYAAALQWTLIY 238
Query: 274 -------DKEDDLKVGVKSTALRFGDSSKEWTTGFGIACISSLALSGYNAD 317
DK DD+ +GVKSTALR G +K+W + FG+ ++SL G +D
Sbjct: 239 DTIYAHQDKADDIMIGVKSTALRLGADTKKWLSAFGVGTVASLTACGIASD 289
>sp|Q10252|COQ2_SCHPO 4-hydroxybenzoate polyprenyltransferase, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=coq2 PE=1 SV=2
Length = 360
Score = 201 bits (511), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 119/269 (44%), Positives = 163/269 (60%), Gaps = 17/269 (6%)
Query: 84 SNEKSSWIDLYLPRQARAYAKLARLDKPIGTWLLAWPCMWSITMAA---PRGHFPDFKMM 140
S K SW DL+ R + YA+++R P GT+LL PC WSI MAA KM+
Sbjct: 51 SPSKKSWKDLFSKRW-QYYAEISRAGSPTGTYLLYSPCTWSILMAAYAYDSSLVNVTKML 109
Query: 141 ALFGCGALLLRGAGCTVNDLLDRDIDNMVERTRLRPVASGLLTPFQGLSFLGFQLLLGLG 200
ALFG G+ L+R AGC +NDL DR++D VER++ RP+ASG L+ Q +S L QL LG
Sbjct: 110 ALFGVGSFLMRSAGCVINDLWDRELDAKVERSKSRPLASGKLSVRQAISLLSVQLTASLG 169
Query: 201 ILLQLNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGS--LDL 258
ILLQLN ++ LG +SL+ V YP MKR T++PQ LGLTF +GA++GW A+ G ++
Sbjct: 170 ILLQLNPYTIKLGVASLVPVCIYPAMKRITYYPQVVLGLTFGYGAVMGWPALAGEACMNW 229
Query: 259 AVVFPMYISGVFWTL---------DKEDDLKVGVKSTALRFGDSSKEWTTGFGIACISSL 309
+VV P+Y+S + W + DK DD+K + STALRFGD++K G I++L
Sbjct: 230 SVVAPLYLSTISWIVLYDTIYAHQDKRDDVKANIYSTALRFGDNTKPVLCGLAALQIATL 289
Query: 310 ALSGYNADIG--IYLLLVVFCSSRLLSLV 336
A +G G Y L V + RL S++
Sbjct: 290 ATAGIMNGQGPVFYTLGVAGAAYRLSSMI 318
>sp|P32378|COQ2_YEAST 4-hydroxybenzoate polyprenyltransferase, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=COQ2 PE=1 SV=1
Length = 372
Score = 186 bits (471), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 105/236 (44%), Positives = 147/236 (62%), Gaps = 13/236 (5%)
Query: 95 LPRQARAYAKLARLDKPIGTWLLAWPCMWSITMAAPRGHF---PDFKMMALFGCGALLLR 151
LP++ YA+L RL+KP+GTWLL PC WSI M A M+ +FG GAL++R
Sbjct: 76 LPKKWIPYAELMRLEKPVGTWLLYLPCSWSILMGAMMQGATLSATAGMLGIFGVGALVMR 135
Query: 152 GAGCTVNDLLDRDIDNMVERTRLRPVASGLLTPFQGLSFLGFQLLLGLGILLQLNNFSRI 211
GAGCT+ND LDR +D V R+ RP+ASG ++P + L FLG Q L+G+G+L L
Sbjct: 136 GAGCTINDFLDRKLDQRVIRSVERPIASGRVSPRRALVFLGAQTLVGMGVLSLLPAQCWW 195
Query: 212 LGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFW 271
LG +SL +VF+YPL KRFT++PQA L FNWGALLG+ A+ G + + P+Y+S W
Sbjct: 196 LGLASLPIVFTYPLFKRFTYYPQAALSACFNWGALLGFPAM-GVMSWPTMIPLYLSSYLW 254
Query: 272 TL---------DKEDDLKVGVKSTALRFGDSSKEWTTGFGIACISSLALSGYNADI 318
+ DK+ D+K G+KSTAL +G +K + I+ LA++G N+ +
Sbjct: 255 CMTYDTIYAHQDKKFDIKAGIKSTALAWGPRTKSIMKAMSASQIALLAVAGLNSGL 310
>sp|Q21DY7|UBIA_SACD2 4-hydroxybenzoate octaprenyltransferase OS=Saccharophagus degradans
(strain 2-40 / ATCC 43961 / DSM 17024) GN=ubiA PE=3 SV=1
Length = 299
Score = 161 bits (408), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 90/228 (39%), Positives = 131/228 (57%), Gaps = 12/228 (5%)
Query: 101 AYAKLARLDKPIGTWLLAWPCMWSITMAAPRGHFPDFKMMALFGCGALLLRGAGCTVNDL 160
AYAKL RLD+PIG +L+ WP +WS+ +AA PD+ ++ +F G +L+R AGC +ND
Sbjct: 20 AYAKLMRLDRPIGIYLVLWPTLWSLWIAA--DGLPDWDVLVIFVLGVVLMRSAGCVINDF 77
Query: 161 LDRDIDNMVERTRLRPVASGLLTPFQGLSFLGFQLLLGLGILLQLNNFSRILGASSLLLV 220
DR ID V RT RP+ +GL+TP Q + F L++ ++L N + L LL
Sbjct: 78 ADRKIDGHVRRTANRPLVTGLITPKQAVLFFVALLVIAFILVLFTNPLTIKLSFGGALLA 137
Query: 221 FSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTL------- 273
F YP MKR+T PQ LG F W + +AA L A ++ +Y + V WT+
Sbjct: 138 FCYPFMKRYTQLPQIVLGAAFAWSIPMAFAAQTNQLPEA-IWVLYTAVVLWTVAYDTFYA 196
Query: 274 --DKEDDLKVGVKSTALRFGDSSKEWTTGFGIACISSLALSGYNADIG 319
D+EDDLK+GVKSTA+ FGD + T + + ++A++G +G
Sbjct: 197 MADREDDLKIGVKSTAILFGDQDRIITACLQLMALVAMAMAGERFGLG 244
>sp|Q31DM4|UBIA_THICR 4-hydroxybenzoate octaprenyltransferase OS=Thiomicrospira crunogena
(strain XCL-2) GN=ubiA PE=3 SV=1
Length = 285
Score = 158 bits (400), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 82/208 (39%), Positives = 124/208 (59%), Gaps = 10/208 (4%)
Query: 97 RQARAYAKLARLDKPIGTWLLAWPCMWSITMAAPRGHFPDFKMMALFGCGALLLRGAGCT 156
+Q +AY +L R+D+PIG +L+ WP +W++ +AA P ++ +F GA+++R AGC
Sbjct: 5 QQLQAYLQLTRIDRPIGIYLVLWPALWALWLAADG--MPPMSILIIFILGAVIMRSAGCV 62
Query: 157 VNDLLDRDIDNMVERTRLRPVASGLLTPFQGLSFLGFQLLLGLGILLQLNNFSRILGASS 216
+ND DR D V RT RP+A+G LT Q L F LL G++L LN F+ +L +
Sbjct: 63 INDYADRHFDGYVTRTCARPLATGQLTERQALKFFFVLCLLAFGLVLFLNPFTILLSLGA 122
Query: 217 LLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSL--------DLAVVFPMYISG 268
+ L YP MKR TFWPQA+LG F W + +AA++ + + +V+ +
Sbjct: 123 VGLAILYPFMKRHTFWPQAFLGAAFAWAIPMAFAAIQNQVPWQAWVIFGVTLVWALVYDT 182
Query: 269 VFWTLDKEDDLKVGVKSTALRFGDSSKE 296
+ DKEDD+K+G+KSTA+ FGD +E
Sbjct: 183 AYAVADKEDDVKLGIKSTAILFGDRVQE 210
>sp|B1KKU2|UBIA_SHEWM 4-hydroxybenzoate octaprenyltransferase OS=Shewanella woodyi
(strain ATCC 51908 / MS32) GN=ubiA PE=3 SV=1
Length = 286
Score = 155 bits (393), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 83/228 (36%), Positives = 136/228 (59%), Gaps = 12/228 (5%)
Query: 102 YAKLARLDKPIGTWLLAWPCMWSITMAAPRGHFPDFKMMALFGCGALLLRGAGCTVNDLL 161
Y +LAR+D+PIGT LL WPC+ ++ +AA G PD K++ +F G +++R GC +ND
Sbjct: 10 YLRLARMDRPIGTLLLMWPCLMALVLAA--GGMPDLKVLVIFIIGVVVMRACGCIINDYA 67
Query: 162 DRDIDNMVERTRLRPVASGLLTPFQGLSFLGFQLLLGLGILLQLNNFSRILGASSLLLVF 221
DR +D+ VERT+ RP+ASG ++ + L+ L+ G++L LN L ++L
Sbjct: 68 DRKLDSHVERTKSRPLASGEVSVKEALTLFVVMGLIAFGLVLMLNPLVVQLSFVGIILTI 127
Query: 222 SYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWT--------- 272
YP KRFT PQ +LG+ ++W + +AA G++ A + ++ + WT
Sbjct: 128 IYPFTKRFTNMPQMFLGVVWSWSIPMAYAAQTGTVP-AEAWWLFAANWCWTVAYDTMYAM 186
Query: 273 LDKEDDLKVGVKSTALRFGDSSKEWTTGFGIACISSLALSGYNADIGI 320
+D++DDLKVG+KSTA+ FG ++ F +A ++ ++G+ AD G+
Sbjct: 187 VDRDDDLKVGIKSTAILFGKYDRQVIALFQLAALACFIIAGWAADRGL 234
>sp|A7N0X0|UBIA_VIBHB 4-hydroxybenzoate octaprenyltransferase OS=Vibrio harveyi (strain
ATCC BAA-1116 / BB120) GN=ubiA PE=3 SV=1
Length = 284
Score = 155 bits (391), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/235 (36%), Positives = 136/235 (57%), Gaps = 18/235 (7%)
Query: 97 RQARAYAKLARLDKPIGTWLLAWPCMWSITMAAPRGHFPDFKMMALFGCGALLLRGAGCT 156
+A+AY +L R+D+PIG+ LL WP +W++ +AA P + ++ +F G L+R AGC
Sbjct: 4 EKAKAYWQLMRMDRPIGSLLLLWPTVWALVIAAQ--GMPSWNVLIVFVLGVFLMRSAGCV 61
Query: 157 VNDLLDRDIDNMVERTRLRPVASGLLTPFQGLSFLGFQLLLGLG---ILLQLNNFSRILG 213
+ND DR +D V+RT+ RP+ SG +T + + G L+LG+ ++L +N + L
Sbjct: 62 INDFADRKVDGHVKRTKQRPLPSGKVTSKEAI---GLFLVLGISSFLLVLTMNPLTIKLS 118
Query: 214 ASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTL 273
+ + L F YP MKR+T+ PQ +LGL F+W + WAA G L V F +++ WT+
Sbjct: 119 FAGIFLAFIYPFMKRYTYLPQLFLGLAFSWAIPMAWAAQTGELPWIVWF-VFVINALWTI 177
Query: 274 ---------DKEDDLKVGVKSTALRFGDSSKEWTTGFGIACISSLALSGYNADIG 319
D++DDLK+G+KSTA+ FG K + ++ L L G + ++G
Sbjct: 178 AYDTQYAMVDRDDDLKIGIKSTAILFGRHDKLVIGVLQLVTLAMLVLLGQHYELG 232
>sp|A8FQF8|UBIA_SHESH 4-hydroxybenzoate octaprenyltransferase OS=Shewanella sediminis
(strain HAW-EB3) GN=ubiA PE=3 SV=1
Length = 286
Score = 154 bits (390), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 85/228 (37%), Positives = 132/228 (57%), Gaps = 12/228 (5%)
Query: 102 YAKLARLDKPIGTWLLAWPCMWSITMAAPRGHFPDFKMMALFGCGALLLRGAGCTVNDLL 161
Y +LAR+D+PIGT LL WPC+ ++ +AA G PD K++ +F G +++R GC +ND
Sbjct: 10 YLRLARMDRPIGTLLLLWPCLMALLLAA--GGMPDLKVLTIFIFGVVVMRACGCIINDYA 67
Query: 162 DRDIDNMVERTRLRPVASGLLTPFQGLSFLGFQLLLGLGILLQLNNFSRILGASSLLLVF 221
DRD+D V+RT+ RP+ASG +T + L L G++L LN L ++L
Sbjct: 68 DRDLDAHVDRTKSRPLASGEVTGREALILFAVMGLFAFGLVLMLNPLVVKLSVVGIILTI 127
Query: 222 SYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWT--------- 272
YP KRFT PQ +LG+ ++W + +AA G + A + ++ + WT
Sbjct: 128 IYPFTKRFTNMPQMFLGVVWSWSIPMAYAAQTGEVP-AEAWWLFAANWCWTVAYDTMYAM 186
Query: 273 LDKEDDLKVGVKSTALRFGDSSKEWTTGFGIACISSLALSGYNADIGI 320
+D+EDDLKVG+KSTA+ FG ++ F +A ++ +G+ AD G+
Sbjct: 187 VDREDDLKVGIKSTAILFGKYDRQIIGLFQLAALACFITAGWAADRGL 234
>sp|A3QIF2|UBIA_SHELP 4-hydroxybenzoate octaprenyltransferase OS=Shewanella loihica
(strain ATCC BAA-1088 / PV-4) GN=ubiA PE=3 SV=1
Length = 286
Score = 154 bits (390), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 135/232 (58%), Gaps = 10/232 (4%)
Query: 101 AYAKLARLDKPIGTWLLAWPCMWSITMAAPRGHFPDFKMMALFGCGALLLRGAGCTVNDL 160
AY +LAR+D+PIGT+LL WPC+ ++ +AA G PD K++ +F G +++R GC +ND
Sbjct: 9 AYLRLARMDRPIGTFLLLWPCLMALVLAA--GGMPDLKVLIIFVIGVVVMRACGCIINDY 66
Query: 161 LDRDIDNMVERTRLRPVASGLLTPFQGLSFLGFQLLLGLGILLQLNNFSRILGASSLLLV 220
DR +D+ VERT+ RP+ASG +T + L LL G++L LN L ++L
Sbjct: 67 ADRKLDSHVERTKSRPLASGEVTVKEALILFVVMGLLAFGLVLMLNPLVVQLSFVGIILT 126
Query: 221 FSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAV--------VFPMYISGVFWT 272
YP KRFT PQ +LG+ ++W + +AA G++ + + + ++
Sbjct: 127 IIYPFTKRFTNMPQMFLGVVWSWSIPMAYAAQLGTVPVEAWWLFAANWCWTVAYDTMYAM 186
Query: 273 LDKEDDLKVGVKSTALRFGDSSKEWTTGFGIACISSLALSGYNADIGIYLLL 324
+D++DDLKVG+KSTA+ FG ++ F +A + ++G +AD G+ L
Sbjct: 187 VDRDDDLKVGIKSTAILFGRFDRQIIGLFQLAALGCFIMAGLSADRGLVFAL 238
>sp|A1U6P5|UBIA_MARAV 4-hydroxybenzoate octaprenyltransferase OS=Marinobacter aquaeolei
(strain ATCC 700491 / DSM 11845 / VT8) GN=ubiA PE=3 SV=1
Length = 294
Score = 154 bits (388), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/257 (35%), Positives = 137/257 (53%), Gaps = 17/257 (6%)
Query: 91 IDLYLPRQARA----YAKLARLDKPIGTWLLAWPCMWSITMAAPRGHFPDFKMMALFGCG 146
+ + LP A YA+L R+D+PIGT LL WP W++ +AA G P F + +F G
Sbjct: 2 LQITLPTHVHARLADYARLLRIDRPIGTLLLLWPTYWALWLAAEGG--PSFANLVIFTLG 59
Query: 147 ALLLRGAGCTVNDLLDRDIDNMVERTRLRPVASGLLTPFQGLS-FLGFQLLLGLGILLQL 205
+R AGC +ND DRD D V+RT+ RP+ +G + ++ ++ F G L+ L ++L
Sbjct: 60 VFFMRAAGCAINDFADRDWDRHVKRTKDRPLTAGRVRAWEAVALFAGLCLVSFLMVVLFT 119
Query: 206 NNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMY 265
N + L LL F YP MKR+T PQ +LG F+W + WAA L + + ++
Sbjct: 120 NTLTLYLSFGGALLAFIYPFMKRYTHLPQLFLGAAFSWAIPMAWAAEANQLS-QLTWLLF 178
Query: 266 ISGVFWT---------LDKEDDLKVGVKSTALRFGDSSKEWTTGFGIACISSLALSGYNA 316
+ V WT +D++DDLKVG+KSTA+ FGD+ + + L + G A
Sbjct: 179 TANVLWTVAYDTLYAMVDRDDDLKVGIKSTAILFGDADRAIIALLQTMVVVILVMVGQRA 238
Query: 317 DIGIYLLLVVFCSSRLL 333
++G + L V + L
Sbjct: 239 ELGSFYYLGVVAMATLF 255
>sp|B0TRE7|UBIA_SHEHH 4-hydroxybenzoate octaprenyltransferase OS=Shewanella halifaxensis
(strain HAW-EB4) GN=ubiA PE=3 SV=1
Length = 287
Score = 154 bits (388), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 128/226 (56%), Gaps = 10/226 (4%)
Query: 102 YAKLARLDKPIGTWLLAWPCMWSITMAAPRGHFPDFKMMALFGCGALLLRGAGCTVNDLL 161
Y +LAR+D+PIGT LL WPC+ ++T AA G PD K+ +F G +++R GC +ND
Sbjct: 10 YMRLARMDRPIGTLLLLWPCLMALTFAA--GGLPDLKVFIIFVIGVVVMRACGCIINDYA 67
Query: 162 DRDIDNMVERTRLRPVASGLLTPFQGLSFLGFQLLLGLGILLQLNNFSRILGASSLLLVF 221
DRD+D+ VERT+ RP+ASG ++ + L G L ++L LN L ++L
Sbjct: 68 DRDLDSHVERTKARPLASGEISSKEALLLFGVMGLFAFSLVLMLNPLVVQLSVVGIILTI 127
Query: 222 SYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAV--------VFPMYISGVFWTL 273
YP KR+T PQ +LG ++W + +AA G++ + + + ++ +
Sbjct: 128 IYPFTKRYTNMPQMFLGTVWSWSIPMAYAAQTGTVPIEAWWLFAANWCWTVAYDTMYAMV 187
Query: 274 DKEDDLKVGVKSTALRFGDSSKEWTTGFGIACISSLALSGYNADIG 319
D++DDLKVG+KSTA+ FG ++ F +A +S ++G A G
Sbjct: 188 DRDDDLKVGIKSTAILFGRYDRQIIAAFQLAALSCFIIAGMLAGRG 233
>sp|Q2SNV5|UBIA_HAHCH 4-hydroxybenzoate octaprenyltransferase OS=Hahella chejuensis
(strain KCTC 2396) GN=ubiA PE=3 SV=1
Length = 300
Score = 153 bits (386), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 131/231 (56%), Gaps = 16/231 (6%)
Query: 102 YAKLARLDKPIGTWLLAWPCMWSITMAAPRGHFPDFKMMALFGCGALLLRGAGCTVNDLL 161
Y L RL++PIGT+LL WP +W++ +A+ P K + +F G LL+R AGC +ND
Sbjct: 22 YIGLTRLNRPIGTYLLLWPTLWALWLASEGA--PSLKNLFIFVFGVLLMRSAGCVINDYA 79
Query: 162 DRDIDNMVERTRLRPVASGLLTPFQGLSFLGFQLLLGLGILLQL--NNFSRILGASSLLL 219
DR ID VERT+ RP A +T + L+ G +L+G+ +L L N + L A +L L
Sbjct: 80 DRRIDMHVERTKGRPFAQNQVTEKEALTLFG--ILVGVSFILVLFTNALTIYLSAGALAL 137
Query: 220 VFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTL------ 273
+YP MKR T+ PQ LG F WG + +AA ++ + +Y + V WT+
Sbjct: 138 ASTYPFMKRHTYLPQVVLGAAFAWGIPMAFAAELDAVP-QQAWLLYTATVVWTVAYDTMY 196
Query: 274 ---DKEDDLKVGVKSTALRFGDSSKEWTTGFGIACISSLALSGYNADIGIY 321
D+EDDLK+GVKSTA+ FG++ + G + + L + G ++G+Y
Sbjct: 197 AMADREDDLKIGVKSTAILFGEADRAAVAGLQVLTLGVLFMVGAQHELGVY 247
>sp|Q9PH76|UBIA_XYLFA 4-hydroxybenzoate octaprenyltransferase OS=Xylella fastidiosa
(strain 9a5c) GN=ubiA PE=3 SV=2
Length = 299
Score = 150 bits (380), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/226 (36%), Positives = 128/226 (56%), Gaps = 17/226 (7%)
Query: 76 SVEKETSSSNEKSSWIDLYLPRQARAYAKLARLDKPIGTWLLAWPCMWSITMAAPRGHFP 135
+ E+ TS+ W + P Y KLAR D+P+G LL WP W++ +AA G P
Sbjct: 2 AYERFTSAITLLMHWRNRLDP-----YWKLARGDRPVGFLLLLWPTWWALWLAA--GGVP 54
Query: 136 DFKMMALFGCGALLLRGAGCTVNDLLDRDIDNMVERTRLRPVASGLLTPFQGLSFLGFQL 195
+ + +F G L R AGC +ND DR +D VERTR+RP+ +G ++P L +
Sbjct: 55 PWWTLCVFTTGIWLTRSAGCVINDYTDRWLDPHVERTRIRPLVTGAVSPRNALLMFATLM 114
Query: 196 LLGLGILLQLNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGS 255
L+ G++L +N + +L L L +YP +KR+T+ PQ YLGL F WG + +AA++G
Sbjct: 115 LIAFGLVLTMNQLTVLLSVVGLFLAMTYPYLKRYTYLPQVYLGLAFGWGIPMAFAAIQGK 174
Query: 256 LDLAVVFPMYISGVFWT---------LDKEDDLKVGVKSTALRFGD 292
+ + +Y++ + WT +D++DD+K+G KSTA+ F D
Sbjct: 175 VP-TQAWLLYVANILWTTAYDTWCAMVDRDDDIKMGAKSTAILFAD 219
>sp|B6J612|UBIA_COXB1 4-hydroxybenzoate octaprenyltransferase OS=Coxiella burnetii
(strain CbuK_Q154) GN=ubiA PE=3 SV=1
Length = 287
Score = 150 bits (378), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/210 (37%), Positives = 123/210 (58%), Gaps = 12/210 (5%)
Query: 95 LPRQARAYAKLARLDKPIGTWLLAWPCMWSITMAAPRGHFPDFKMMALFGCGALLLRGAG 154
L +Q Y +L R DKP+G +LL WP +W++ +AA P FK+ +F G++++R AG
Sbjct: 4 LRQQIPHYLRLMRFDKPVGIFLLLWPTLWAVWIAAKGA--PSFKIAVIFIAGSVVMRAAG 61
Query: 155 CTVNDLLDRDIDNMVERTRLRPVASGLLTPFQGLSFLGFQLLLGLGILLQLNNFSRILGA 214
C VND DR +D V+RT++RP+ASG ++ + + L+ ++L LN + L
Sbjct: 62 CIVNDFADRHLDKHVQRTQMRPLASGSVSVTEAMLLFAVLSLIAFTLVLLLNRLTVELAV 121
Query: 215 SSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFW--- 271
+LL YP +KRFT PQ +LG+ F+W + +AA G + AV + ++ + V W
Sbjct: 122 IGILLALVYPFLKRFTHLPQLWLGIAFSWSIPMAFAATVGHVP-AVAWLLFFAAVLWPIV 180
Query: 272 ------TLDKEDDLKVGVKSTALRFGDSSK 295
+D+EDD+KVG+KSTA+ FG +
Sbjct: 181 YDTQYAMIDREDDVKVGIKSTAILFGRYDR 210
>sp|Q87KM9|UBIA_VIBPA 4-hydroxybenzoate octaprenyltransferase OS=Vibrio parahaemolyticus
serotype O3:K6 (strain RIMD 2210633) GN=ubiA PE=3 SV=1
Length = 284
Score = 150 bits (378), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/208 (37%), Positives = 122/208 (58%), Gaps = 12/208 (5%)
Query: 97 RQARAYAKLARLDKPIGTWLLAWPCMWSITMAAPRGHFPDFKMMALFGCGALLLRGAGCT 156
+A+AY +L R+D+PIG+ LL WP +W++ +AA P + ++ +F G L+R AGC
Sbjct: 4 EKAKAYWQLMRMDRPIGSLLLLWPTVWALVIAAQ--GIPSWDVLIVFVLGVFLMRSAGCV 61
Query: 157 VNDLLDRDIDNMVERTRLRPVASGLLTPFQGLSFLGFQLLLGLGILLQLNNFSRILGASS 216
+ND DR +D V+RT+ RP+ SG +T + + + ++L +N + L +
Sbjct: 62 INDFADRKVDGHVKRTKQRPLPSGKVTAKEAIGLFLVLAVSSFLLVLTMNPLTIQLSFAG 121
Query: 217 LLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTL--- 273
L+L F YP MKR+T PQ +LGL F+W + WAA G L + V F +++ WT+
Sbjct: 122 LVLAFIYPFMKRYTHIPQLFLGLAFSWAIPMAWAAQTGELPVMVWF-VFVINALWTIAYD 180
Query: 274 ------DKEDDLKVGVKSTALRFGDSSK 295
D++DDLK+G+KSTA+ FG K
Sbjct: 181 TQYAMVDRDDDLKIGIKSTAILFGRHDK 208
>sp|Q83F93|UBIA_COXBU 4-hydroxybenzoate octaprenyltransferase OS=Coxiella burnetii
(strain RSA 493 / Nine Mile phase I) GN=ubiA PE=3 SV=1
Length = 287
Score = 149 bits (377), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/210 (37%), Positives = 123/210 (58%), Gaps = 12/210 (5%)
Query: 95 LPRQARAYAKLARLDKPIGTWLLAWPCMWSITMAAPRGHFPDFKMMALFGCGALLLRGAG 154
L +Q Y +L R DKP+G +LL WP +W++ +AA P FK+ +F G++++R AG
Sbjct: 4 LRQQMPHYLRLMRFDKPVGIFLLLWPTLWAVWIAAKGA--PSFKIAVIFIAGSVVMRAAG 61
Query: 155 CTVNDLLDRDIDNMVERTRLRPVASGLLTPFQGLSFLGFQLLLGLGILLQLNNFSRILGA 214
C VND DR +D V+RT++RP+ASG ++ + + L+ ++L LN + L
Sbjct: 62 CIVNDFADRHLDKHVQRTQMRPLASGSVSVTEAMLLFAVLSLIAFTLVLLLNRLTVELAV 121
Query: 215 SSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFW--- 271
+LL YP +KRFT PQ +LG+ F+W + +AA G + AV + ++ + V W
Sbjct: 122 IGILLALVYPFLKRFTHLPQLWLGVAFSWSIPMAFAATVGHVP-AVAWLLFFAAVLWPIV 180
Query: 272 ------TLDKEDDLKVGVKSTALRFGDSSK 295
+D+EDD+KVG+KSTA+ FG +
Sbjct: 181 YDTQYAMIDREDDVKVGIKSTAILFGRYDR 210
>sp|A9KGW7|UBIA_COXBN 4-hydroxybenzoate octaprenyltransferase OS=Coxiella burnetii
(strain Dugway 5J108-111) GN=ubiA PE=3 SV=1
Length = 287
Score = 149 bits (377), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/210 (37%), Positives = 123/210 (58%), Gaps = 12/210 (5%)
Query: 95 LPRQARAYAKLARLDKPIGTWLLAWPCMWSITMAAPRGHFPDFKMMALFGCGALLLRGAG 154
L +Q Y +L R DKP+G +LL WP +W++ +AA P FK+ +F G++++R AG
Sbjct: 4 LRQQMPHYLRLMRFDKPVGIFLLLWPTLWAVWIAAKGA--PSFKIAVIFIAGSVVMRAAG 61
Query: 155 CTVNDLLDRDIDNMVERTRLRPVASGLLTPFQGLSFLGFQLLLGLGILLQLNNFSRILGA 214
C VND DR +D V+RT++RP+ASG ++ + + L+ ++L LN + L
Sbjct: 62 CIVNDFADRHLDKHVQRTQMRPLASGSVSVTEAMLLFAVLSLIAFTLVLLLNRLTVELAV 121
Query: 215 SSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFW--- 271
+LL YP +KRFT PQ +LG+ F+W + +AA G + AV + ++ + V W
Sbjct: 122 IGILLALVYPFLKRFTHLPQLWLGVAFSWSIPMAFAATVGHVP-AVAWLLFFAAVLWPIV 180
Query: 272 ------TLDKEDDLKVGVKSTALRFGDSSK 295
+D+EDD+KVG+KSTA+ FG +
Sbjct: 181 YDTQYAMIDREDDVKVGIKSTAILFGRYDR 210
>sp|B6J375|UBIA_COXB2 4-hydroxybenzoate octaprenyltransferase OS=Coxiella burnetii
(strain CbuG_Q212) GN=ubiA PE=3 SV=1
Length = 287
Score = 149 bits (377), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/210 (37%), Positives = 123/210 (58%), Gaps = 12/210 (5%)
Query: 95 LPRQARAYAKLARLDKPIGTWLLAWPCMWSITMAAPRGHFPDFKMMALFGCGALLLRGAG 154
L +Q Y +L R DKP+G +LL WP +W++ +AA P FK+ +F G++++R AG
Sbjct: 4 LRQQMPHYLRLMRFDKPVGIFLLLWPTLWAVWIAAKGA--PSFKIAVIFIAGSVVMRAAG 61
Query: 155 CTVNDLLDRDIDNMVERTRLRPVASGLLTPFQGLSFLGFQLLLGLGILLQLNNFSRILGA 214
C VND DR +D V+RT++RP+ASG ++ + + L+ ++L LN + L
Sbjct: 62 CIVNDFADRHLDKHVQRTQMRPLASGSVSVTEAMLLFAVLSLIAFTLVLLLNRLTVELAV 121
Query: 215 SSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFW--- 271
+LL YP +KRFT PQ +LG+ F+W + +AA G + AV + ++ + V W
Sbjct: 122 IGILLALVYPFLKRFTHLPQLWLGVAFSWSIPMAFAATVGHVP-AVAWLLFFAAVLWPIV 180
Query: 272 ------TLDKEDDLKVGVKSTALRFGDSSK 295
+D+EDD+KVG+KSTA+ FG +
Sbjct: 181 YDTQYAMIDREDDVKVGIKSTAILFGRYDR 210
>sp|A9N9X0|UBIA_COXBR 4-hydroxybenzoate octaprenyltransferase OS=Coxiella burnetii
(strain RSA 331 / Henzerling II) GN=ubiA PE=3 SV=1
Length = 287
Score = 149 bits (377), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/210 (37%), Positives = 123/210 (58%), Gaps = 12/210 (5%)
Query: 95 LPRQARAYAKLARLDKPIGTWLLAWPCMWSITMAAPRGHFPDFKMMALFGCGALLLRGAG 154
L +Q Y +L R DKP+G +LL WP +W++ +AA P FK+ +F G++++R AG
Sbjct: 4 LRQQMPHYLRLMRFDKPVGIFLLLWPTLWAVWIAAKGA--PSFKIAVIFIAGSVVMRAAG 61
Query: 155 CTVNDLLDRDIDNMVERTRLRPVASGLLTPFQGLSFLGFQLLLGLGILLQLNNFSRILGA 214
C VND DR +D V+RT++RP+ASG ++ + + L+ ++L LN + L
Sbjct: 62 CIVNDFADRHLDKHVQRTQMRPLASGSVSVTEAMLLFAVLSLIAFTLVLLLNRLTVELAV 121
Query: 215 SSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFW--- 271
+LL YP +KRFT PQ +LG+ F+W + +AA G + AV + ++ + V W
Sbjct: 122 IGILLALVYPFLKRFTHLPQLWLGVAFSWSIPMAFAATVGHVP-AVAWLLFFAAVLWPIV 180
Query: 272 ------TLDKEDDLKVGVKSTALRFGDSSK 295
+D+EDD+KVG+KSTA+ FG +
Sbjct: 181 YDTQYAMIDREDDVKVGIKSTAILFGRYDR 210
>sp|A1WVM9|UBIA_HALHL 4-hydroxybenzoate octaprenyltransferase OS=Halorhodospira halophila
(strain DSM 244 / SL1) GN=ubiA PE=3 SV=2
Length = 280
Score = 149 bits (375), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 79/205 (38%), Positives = 124/205 (60%), Gaps = 12/205 (5%)
Query: 100 RAYAKLARLDKPIGTWLLAWPCMWSITMAAPRGHFPDFKMMALFGCGALLLRGAGCTVND 159
R YA+LARLD+PIG +LL WP +W++ +AA PD ++ +F G +++R AGC +ND
Sbjct: 2 RTYAQLARLDRPIGNFLLLWPVLWALWIAA--AGVPDLDLLVIFTLGVVVMRAAGCVIND 59
Query: 160 LLDRDIDNMVERTRLRPVASGLLTPFQGLSFLGFQLLLGLGILLQLNNFSRILGASSLLL 219
DR ID V+RTR RP A+G ++ + L LL G++L N + ++ +++L
Sbjct: 60 FADRHIDGHVKRTRQRPFATGRVSEREALLLFVVLCLLAFGLVLLTNPLTILMSLVAVVL 119
Query: 220 VFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWT------- 272
+YP KR+T PQ +LGL F W + +AA G++ + V + + I+ V W
Sbjct: 120 AATYPFTKRYTHLPQVHLGLAFGWAVPMVFAAQTGTVPV-VAWLLLIATVLWATVYDTMY 178
Query: 273 --LDKEDDLKVGVKSTALRFGDSSK 295
+D++DD+K+GVKSTA+ FGD +
Sbjct: 179 AMVDRDDDIKIGVKSTAVLFGDLDR 203
>sp|Q3K4G3|UBIA_PSEPF 4-hydroxybenzoate octaprenyltransferase OS=Pseudomonas fluorescens
(strain Pf0-1) GN=ubiA PE=3 SV=1
Length = 296
Score = 149 bits (375), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 88/240 (36%), Positives = 136/240 (56%), Gaps = 17/240 (7%)
Query: 96 PRQARAYAKLARLDKPIGTWLLAWPCMWSITMAAPRGHFPDFKMMALFGCGALLLRGAGC 155
PR A + +L R+DKPIG +LL WP +W++ +A P + +F G +L R GC
Sbjct: 14 PR-AWDFIQLTRMDKPIGIYLLLWPTLWALWIAGKGS--PSLANIVIFVLGVVLTRAGGC 70
Query: 156 TVNDLLDRDIDNMVERTRLRPVASGLLTPFQGLSFLGFQLLLGLGILLQL--NNFSRILG 213
+ND DR +D V+RT RP+A+G ++ + L F F LL+G+ LL L N + L
Sbjct: 71 VINDWADRKVDGHVKRTAQRPIAAGKISSKEALVF--FALLMGVSFLLVLCTNAATIWLS 128
Query: 214 ASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTL 273
L L F+YP MKR+T++PQ LG F+WG + + A G L A + ++I+ + WT+
Sbjct: 129 LGGLALAFTYPFMKRYTYYPQVVLGAAFSWGMPMAFTAETGELP-ATAWLLWIANLLWTV 187
Query: 274 ---------DKEDDLKVGVKSTALRFGDSSKEWTTGFGIACISSLALSGYNADIGIYLLL 324
D++DDLK+GVKSTA+ FGD+ + + + L L+G ++G++ L
Sbjct: 188 GYDTYYAMTDRDDDLKIGVKSTAILFGDADRVIILTLQVLSLGCLVLAGSKFELGMWFHL 247
>sp|Q07XN2|UBIA_SHEFN 4-hydroxybenzoate octaprenyltransferase OS=Shewanella frigidimarina
(strain NCIMB 400) GN=ubiA PE=3 SV=1
Length = 286
Score = 149 bits (375), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 82/235 (34%), Positives = 133/235 (56%), Gaps = 12/235 (5%)
Query: 95 LPRQARAYAKLARLDKPIGTWLLAWPCMWSITMAAPRGHFPDFKMMALFGCGALLLRGAG 154
L + RAYA+L R+D+PIGT LL WPC+ ++ +AA PD K++ +F G +++R G
Sbjct: 3 LQDKLRAYARLMRIDRPIGTLLLLWPCLMALVLAAQ--GLPDIKVLLIFIVGVVIMRANG 60
Query: 155 CTVNDLLDRDIDNMVERTRLRPVASGLLTPFQGLSFLGFQLLLGLGILLQLNNFSRILGA 214
C +ND DR +D VERT +RP+ SG ++ + L+ L ++L LN L
Sbjct: 61 CIINDFADRKLDAHVERTSMRPLVSGEVSVKEALTLFTLLGLAAFCLVLWLNPLVVQLSV 120
Query: 215 SSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWT-- 272
++L YP MKR T PQ +LG+ ++W + +AA G + + + ++++ WT
Sbjct: 121 VGIILTVMYPFMKRVTNMPQMFLGIVWSWSIPMAYAAQLGEVPVE-AWWLFMANWCWTVA 179
Query: 273 -------LDKEDDLKVGVKSTALRFGDSSKEWTTGFGIACISSLALSGYNADIGI 320
+D++DDLKVG+KSTA+ FG ++ F +A + ++G AD G+
Sbjct: 180 YDTMYAIVDRDDDLKVGIKSTAILFGRFDRQIIGVFQLAALGCFVMAGLVADRGV 234
>sp|Q4ZLB4|UBIA_PSEU2 4-hydroxybenzoate octaprenyltransferase OS=Pseudomonas syringae pv.
syringae (strain B728a) GN=ubiA PE=3 SV=1
Length = 296
Score = 148 bits (374), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 87/236 (36%), Positives = 132/236 (55%), Gaps = 16/236 (6%)
Query: 95 LPRQARAYAKLARLDKPIGTWLLAWPCMWSITMAAPRGHFPDFKMMALFGCGALLLRGAG 154
L +A + +L R+DKPIG +LL WP +W++ +A P + + +F G L+R AG
Sbjct: 12 LSPRAWDFIQLTRIDKPIGVYLLLWPTLWAVWIAGKGA--PSLQTVCIFVLGVFLMRAAG 69
Query: 155 CTVNDLLDRDIDNMVERTRLRPVASGLLTPFQGLSFLGFQLLLGLGILLQL--NNFSRIL 212
C +ND DR +D V+RT RP+ SG ++P + L F +L+GL +L L N + L
Sbjct: 70 CVINDFADRKVDGHVKRTEQRPLVSGKVSPREALVL--FAVLVGLSFVLVLFTNAATIWL 127
Query: 213 GASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWT 272
L L SYP MKR+T++PQ LG F+WG + + A G L A + +YI+ + WT
Sbjct: 128 SFGGLALAASYPFMKRYTYYPQVVLGAAFSWGMPMAFTAETGELP-AAAWLLYIANLLWT 186
Query: 273 ---------LDKEDDLKVGVKSTALRFGDSSKEWTTGFGIACISSLALSGYNADIG 319
+D++DDLK+GVKSTA+ FGD+ + + L L+G ++G
Sbjct: 187 VGYDTYYAMVDRDDDLKIGVKSTAVLFGDADRVIILTLQGLALGCLMLAGARFELG 242
>sp|A6VEG6|UBIA_PSEA7 4-hydroxybenzoate octaprenyltransferase OS=Pseudomonas aeruginosa
(strain PA7) GN=ubiA PE=3 SV=1
Length = 296
Score = 148 bits (374), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 78/207 (37%), Positives = 124/207 (59%), Gaps = 12/207 (5%)
Query: 98 QARAYAKLARLDKPIGTWLLAWPCMWSITMAAPRGHFPDFKMMALFGCGALLLRGAGCTV 157
+A + +L RLD+PIG +LL WP +WS+ +AA G P+ K + +F G L+R AGC +
Sbjct: 15 RAWDFVQLVRLDRPIGIYLLLWPTLWSLWIAA--GGVPELKNLLIFVLGVTLMRAAGCVI 72
Query: 158 NDLLDRDIDNMVERTRLRPVASGLLTPFQGLSFLGFQLLLGLGILLQLNNFSRILGASSL 217
ND DRD D V RT+ RP+A+G ++ + + L G++L N + L ++
Sbjct: 73 NDFADRDFDGHVARTKARPLATGKISVREAWITFTILVALSFGLVLLTNAPTIWLSFGAV 132
Query: 218 LLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTL---- 273
+ YP MKR+T++PQ LG ++WG L+ + A +G L A + ++++ V WT+
Sbjct: 133 AVASLYPFMKRYTYYPQVVLGAAYSWGILMAFTAERGELP-ASAWLLFLANVLWTVAYDS 191
Query: 274 -----DKEDDLKVGVKSTALRFGDSSK 295
D+EDDLK+G+KSTA+ FGD+ +
Sbjct: 192 YYAMTDREDDLKIGIKSTAILFGDADR 218
>sp|A4Y0P0|UBIA_PSEMY 4-hydroxybenzoate octaprenyltransferase OS=Pseudomonas mendocina
(strain ymp) GN=ubiA PE=3 SV=1
Length = 296
Score = 148 bits (373), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 83/207 (40%), Positives = 119/207 (57%), Gaps = 12/207 (5%)
Query: 98 QARAYAKLARLDKPIGTWLLAWPCMWSITMAAPRGHFPDFKMMALFGCGALLLRGAGCTV 157
+A + +L RLDKPIG +LL WP +W++ +AA P K + +F G +L+R AGC +
Sbjct: 15 RAWDFIQLMRLDKPIGIYLLLWPTLWALWVAAE--GVPSAKNLFIFVFGVILMRAAGCVI 72
Query: 158 NDLLDRDIDNMVERTRLRPVASGLLTPFQGLSFLGFQLLLGLGILLQLNNFSRILGASSL 217
ND DR+ D V RTR RP+ASG + P + L + ++L N + L L
Sbjct: 73 NDYADRNFDGHVSRTRARPLASGKIQPREALVLFAVLVTASFVLVLFTNATTIWLSFGGL 132
Query: 218 LLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTL---- 273
L YP MKR+TF+PQ LG F+WG + + A GSL + +YI+ + WT+
Sbjct: 133 ALAACYPFMKRYTFYPQVVLGAAFSWGMPMAFTAETGSLP-PEAWLLYIANLLWTVAYDT 191
Query: 274 -----DKEDDLKVGVKSTALRFGDSSK 295
D+EDDLK+GVKSTA+ FGD+ +
Sbjct: 192 YYAMADREDDLKIGVKSTAILFGDADR 218
>sp|Q3JBS8|UBIA_NITOC 4-hydroxybenzoate octaprenyltransferase OS=Nitrosococcus oceani
(strain ATCC 19707 / NCIMB 11848) GN=ubiA PE=3 SV=1
Length = 285
Score = 147 bits (372), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 130/232 (56%), Gaps = 12/232 (5%)
Query: 102 YAKLARLDKPIGTWLLAWPCMWSITMAAPRGHFPDFKMMALFGCGALLLRGAGCTVNDLL 161
YA+L RLD+P+G +LL WP +W++ +A PD K++ +F G L+R AGC +ND
Sbjct: 8 YAQLMRLDRPVGIFLLLWPTLWALWIAGAGQ--PDPKVLLVFVAGVALMRSAGCVINDFA 65
Query: 162 DRDIDNMVERTRLRPVASGLLTPFQGLSFLGFQLLLGLGILLQLNNFSRILGASSLLLVF 221
DR D V+RT RP+A+G + + L L+ G++L LN + L + LL
Sbjct: 66 DRAFDPHVKRTINRPLATGKASSQEALLLFAGLCLVAFGLVLLLNPLTIGLSFAGALLAA 125
Query: 222 SYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWT--------- 272
+YP MKR+T WPQAYLG F W + +AA G++ +A + ++I+ V W
Sbjct: 126 TYPFMKRYTHWPQAYLGAAFGWAVPMAFAAQTGTVPIA-AWLLFIATVLWATVYDTFYGM 184
Query: 273 LDKEDDLKVGVKSTALRFGDSSKEWTTGFGIACISSLALSGYNADIGIYLLL 324
+D+EDDL +GVKSTA+ FG+ + T A + L GY +G Y L
Sbjct: 185 VDREDDLLIGVKSTAILFGEGDRLVTALLQGALLLLLFWIGYREGLGFYYYL 236
>sp|A8GZR0|UBIA_SHEPA 4-hydroxybenzoate octaprenyltransferase OS=Shewanella pealeana
(strain ATCC 700345 / ANG-SQ1) GN=ubiA PE=3 SV=1
Length = 288
Score = 147 bits (372), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 125/226 (55%), Gaps = 10/226 (4%)
Query: 102 YAKLARLDKPIGTWLLAWPCMWSITMAAPRGHFPDFKMMALFGCGALLLRGAGCTVNDLL 161
Y +LAR+D+PIGT LL WPC+ ++T AA G PD K+ +F G +R GC +ND
Sbjct: 10 YMRLARMDRPIGTLLLLWPCLMALTFAA--GGLPDLKVFIIFVIGVFSMRACGCIINDYA 67
Query: 162 DRDIDNMVERTRLRPVASGLLTPFQGLSFLGFQLLLGLGILLQLNNFSRILGASSLLLVF 221
DR +D VERT+ RP+ASG ++ + L L G++L LN L ++L
Sbjct: 68 DRKLDAHVERTKGRPLASGEVSSKEALLLFVVMALFSFGLVLMLNPLVVQLSVIGIILTI 127
Query: 222 SYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAV--------VFPMYISGVFWTL 273
YP KR+T PQ +LG ++W + +AA G++ + + + ++ +
Sbjct: 128 IYPFTKRYTNMPQMFLGTVWSWSIPMAYAAQTGTVPVEAWWLFAANWCWTVAYDTMYAMV 187
Query: 274 DKEDDLKVGVKSTALRFGDSSKEWTTGFGIACISSLALSGYNADIG 319
D++DDLKVG+KSTA+ FG ++ F +A +S ++G AD G
Sbjct: 188 DRDDDLKVGIKSTAILFGRYDRQIIGLFQLAALSCFIIAGMVADRG 233
>sp|A4VGN3|UBIA_PSEU5 4-hydroxybenzoate octaprenyltransferase OS=Pseudomonas stutzeri
(strain A1501) GN=ubiA PE=3 SV=1
Length = 297
Score = 147 bits (370), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/233 (36%), Positives = 133/233 (57%), Gaps = 13/233 (5%)
Query: 96 PRQARAYAKLARLDKPIGTWLLAWPCMWSITMAAPRGHFPDFKMMALFGCGALLLRGAGC 155
PR A + +L RLDKPIGT+LL WP +W++ +AA P K + +F G +L+R AGC
Sbjct: 14 PR-AWDFIQLMRLDKPIGTYLLLWPTLWALWIAAE--GVPSAKNLFIFITGVILMRAAGC 70
Query: 156 TVNDLLDRDIDNMVERTRLRPVASGLLTPFQGLSFLGFQLLLGLGILLQLNNFSRILGAS 215
VND DR+ D V+RT+ RP+A+G ++ + + + L G++L N + L
Sbjct: 71 VVNDFADRNFDGHVQRTQARPMAAGRVSSREAWTLFAVLVGLSFGLVLLTNATTVYLSFG 130
Query: 216 SLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTL-- 273
+L L YP MKR+TF+PQ LG F+WG + + A GSL + ++I+ + WT+
Sbjct: 131 ALALAACYPFMKRYTFYPQVVLGAAFSWGMPMAFTAETGSLP-PEAWLLFIANLLWTVAY 189
Query: 274 -------DKEDDLKVGVKSTALRFGDSSKEWTTGFGIACISSLALSGYNADIG 319
D++DDLK+G+KSTA+ FG++ + + L L+G ++G
Sbjct: 190 DTYYAMADRDDDLKIGIKSTAILFGEADRVIIVTLQGLALFCLLLAGVRFELG 242
>sp|Q02E04|UBIA_PSEAB 4-hydroxybenzoate octaprenyltransferase OS=Pseudomonas aeruginosa
(strain UCBPP-PA14) GN=ubiA PE=3 SV=1
Length = 296
Score = 146 bits (369), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 124/207 (59%), Gaps = 12/207 (5%)
Query: 98 QARAYAKLARLDKPIGTWLLAWPCMWSITMAAPRGHFPDFKMMALFGCGALLLRGAGCTV 157
+A + +L RLD+PIG +LL WP +WS+ +AA P+ K + +F G +L+R AGC +
Sbjct: 15 RAWDFVQLVRLDRPIGIYLLLWPTLWSLWIAAD--GVPELKNLLIFVLGVILMRAAGCVI 72
Query: 158 NDLLDRDIDNMVERTRLRPVASGLLTPFQGLSFLGFQLLLGLGILLQLNNFSRILGASSL 217
ND DR+ D V RT+ RP+A+G ++ + + L G++L N + L ++
Sbjct: 73 NDFADRNFDGHVARTKARPLATGKISVREAWITFAVLVALSFGLVLLTNATTVWLSFGAV 132
Query: 218 LLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTL---- 273
+ YP MKR+T++PQ LG ++WG L+ + A +G L A + ++++ V WT+
Sbjct: 133 AVASLYPFMKRYTYYPQVVLGAAYSWGILMAFTAERGELP-ASAWLLFLANVLWTVAYDS 191
Query: 274 -----DKEDDLKVGVKSTALRFGDSSK 295
D+EDDLK+G+KSTA+ FGD+ +
Sbjct: 192 YYAMTDREDDLKIGIKSTAILFGDADR 218
>sp|Q9HTK0|UBIA_PSEAE 4-hydroxybenzoate octaprenyltransferase OS=Pseudomonas aeruginosa
(strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
GN=ubiA PE=3 SV=1
Length = 296
Score = 146 bits (368), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 124/207 (59%), Gaps = 12/207 (5%)
Query: 98 QARAYAKLARLDKPIGTWLLAWPCMWSITMAAPRGHFPDFKMMALFGCGALLLRGAGCTV 157
+A + +L RLD+PIG +LL WP +WS+ +AA P+ K + +F G +L+R AGC +
Sbjct: 15 RAWDFVQLVRLDRPIGIYLLLWPTLWSLWIAAD--GVPELKNLLIFVLGVILMRAAGCVI 72
Query: 158 NDLLDRDIDNMVERTRLRPVASGLLTPFQGLSFLGFQLLLGLGILLQLNNFSRILGASSL 217
ND DR+ D V RT+ RP+A+G ++ + + L G++L N + L ++
Sbjct: 73 NDFADRNFDGHVARTKARPLATGKISVREAWITFAVLVALSFGLVLLTNATTVWLSFGAV 132
Query: 218 LLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTL---- 273
+ YP MKR+T++PQ LG ++WG L+ + A +G L A + ++++ V WT+
Sbjct: 133 AVASLYPFMKRYTYYPQVVLGAAYSWGILMAFTAERGELP-ASAWLLFLANVLWTVAYDS 191
Query: 274 -----DKEDDLKVGVKSTALRFGDSSK 295
D+EDDLK+G+KSTA+ FGD+ +
Sbjct: 192 YYAMTDREDDLKIGIKSTAILFGDADR 218
>sp|B7V5P9|UBIA_PSEA8 4-hydroxybenzoate octaprenyltransferase OS=Pseudomonas aeruginosa
(strain LESB58) GN=ubiA PE=3 SV=1
Length = 296
Score = 146 bits (368), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 124/207 (59%), Gaps = 12/207 (5%)
Query: 98 QARAYAKLARLDKPIGTWLLAWPCMWSITMAAPRGHFPDFKMMALFGCGALLLRGAGCTV 157
+A + +L RLD+PIG +LL WP +WS+ +AA P+ K + +F G +L+R AGC +
Sbjct: 15 RAWDFVQLVRLDRPIGIYLLLWPTLWSLWIAAD--GVPELKNLLIFVLGVILMRAAGCVI 72
Query: 158 NDLLDRDIDNMVERTRLRPVASGLLTPFQGLSFLGFQLLLGLGILLQLNNFSRILGASSL 217
ND DR+ D V RT+ RP+A+G ++ + + L G++L N + L ++
Sbjct: 73 NDFADRNFDGHVARTKARPLATGKISVREAWITFAVLVALSFGLVLLTNATTVWLSFGAV 132
Query: 218 LLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTL---- 273
+ YP MKR+T++PQ LG ++WG L+ + A +G L A + ++++ V WT+
Sbjct: 133 AVASLYPFMKRYTYYPQVVLGAAYSWGILMAFTAERGELP-ASAWLLFLANVLWTVAYDS 191
Query: 274 -----DKEDDLKVGVKSTALRFGDSSK 295
D+EDDLK+G+KSTA+ FGD+ +
Sbjct: 192 YYAMTDREDDLKIGIKSTAILFGDADR 218
>sp|Q5P5M0|UBIA_AROAE 4-hydroxybenzoate octaprenyltransferase OS=Aromatoleum aromaticum
(strain EbN1) GN=ubiA PE=3 SV=2
Length = 294
Score = 146 bits (368), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/199 (40%), Positives = 119/199 (59%), Gaps = 12/199 (6%)
Query: 102 YAKLARLDKPIGTWLLAWPCMWSITMAAPRGHFPDFKMMALFGCGALLLRGAGCTVNDLL 161
Y +L RLDKPIG LL WP +W++ +AA FP ++ +F G +L+R AGC +ND
Sbjct: 14 YLRLMRLDKPIGILLLMWPTLWALWLAA--DGFPPLHLIVIFALGTVLMRSAGCVINDYA 71
Query: 162 DRDIDNMVERTRLRPVASGLLTPFQGLSFLGFQLLLGLGILLQLNNFSRILGASSLLLVF 221
DRD D VERTR RP+ +G +T + L L+ ++L L+ R L +L L
Sbjct: 72 DRDFDGHVERTRTRPLTTGAVTVREALLLAAGLSLVSFVLILPLDPLVRWLSLPALFLAA 131
Query: 222 SYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWT--------- 272
SYP KRF PQAYLG+ F +G +G+AAV+G + A+ + + ++ +FW
Sbjct: 132 SYPYTKRFLAIPQAYLGIAFGFGIPMGFAAVQGEVP-AIAWLLLLANIFWAVAYDTEYAM 190
Query: 273 LDKEDDLKVGVKSTALRFG 291
+D+ DDLK+G+K++A+ FG
Sbjct: 191 VDRPDDLKIGIKTSAITFG 209
>sp|B0KQB7|UBIA_PSEPG 4-hydroxybenzoate octaprenyltransferase OS=Pseudomonas putida
(strain GB-1) GN=ubiA PE=3 SV=1
Length = 296
Score = 145 bits (366), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 81/210 (38%), Positives = 126/210 (60%), Gaps = 16/210 (7%)
Query: 98 QARAYAKLARLDKPIGTWLLAWPCMWSITMAAPRGHFPDFKMMALFGCGALLLRGAGCTV 157
+A + +L+R+D+PIG +LL WP + ++ +A P + +FG G +L+R AGC +
Sbjct: 15 RAWDFVQLSRMDRPIGIYLLLWPTLSAVWIAGNGS--PTLANVLIFGLGVVLMRAAGCCI 72
Query: 158 NDLLDRDIDNMVERTRLRPVASGLLTPFQGLSFLGFQLLLGLGILLQLNNFSRI--LGAS 215
ND DR +D V+RT RP+ASG + P + L+ F +L+G+ LL L SR L
Sbjct: 73 NDFADRKVDGHVKRTADRPLASGRVRPREALAL--FAMLVGVSFLLVLCTNSRTVWLSFG 130
Query: 216 SLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWT--- 272
++ L F YP MKR+T++PQ LG ++WG + + A G L A + +YI+ + WT
Sbjct: 131 AVALAFCYPFMKRYTYYPQVVLGAAYSWGIPMAFTAAGGELP-ASAWLLYIANLLWTVGY 189
Query: 273 ------LDKEDDLKVGVKSTALRFGDSSKE 296
+D++DDLK+GVKSTA+ FGD+ +
Sbjct: 190 DTYYAMVDRDDDLKIGVKSTAILFGDADRN 219
>sp|Q87U39|UBIA_PSESM 4-hydroxybenzoate octaprenyltransferase OS=Pseudomonas syringae pv.
tomato (strain DC3000) GN=ubiA PE=3 SV=1
Length = 296
Score = 145 bits (366), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/239 (34%), Positives = 129/239 (53%), Gaps = 12/239 (5%)
Query: 95 LPRQARAYAKLARLDKPIGTWLLAWPCMWSITMAAPRGHFPDFKMMALFGCGALLLRGAG 154
L +A + +L R+DKPIG +LL WP +W++ +A P + +F G L+R AG
Sbjct: 12 LSPRAWDFVQLTRIDKPIGIYLLLWPTLWAVWIAGKGS--PSLNTVFIFVAGVFLMRAAG 69
Query: 155 CTVNDLLDRDIDNMVERTRLRPVASGLLTPFQGLSFLGFQLLLGLGILLQLNNFSRILGA 214
C +ND DR +D V+RT RP+ SG ++ + L + L ++L N+ + L
Sbjct: 70 CVINDFADRKVDGHVKRTEQRPLVSGKVSSREALVLFAVLVSLSFVLVLFTNSTTIWLSF 129
Query: 215 SSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWT-- 272
L L YP MKR+T++PQ LG F+WG + + A G L A + +YI+ + WT
Sbjct: 130 GGLALAACYPFMKRYTYYPQVVLGAAFSWGMPMAFTAETGELP-AAAWLLYIANLLWTVG 188
Query: 273 -------LDKEDDLKVGVKSTALRFGDSSKEWTTGFGIACISSLALSGYNADIGIYLLL 324
+D++DDLK+GVKSTA+ FGD+ + + LAL+G ++G + +
Sbjct: 189 YDTYYAMVDRDDDLKIGVKSTAVLFGDADRVIILSLQGLALGCLALAGSRFELGAFFYM 247
>sp|Q88C65|UBIA_PSEPK 4-hydroxybenzoate octaprenyltransferase OS=Pseudomonas putida
(strain KT2440) GN=ubiA PE=3 SV=1
Length = 296
Score = 145 bits (365), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 81/210 (38%), Positives = 126/210 (60%), Gaps = 16/210 (7%)
Query: 98 QARAYAKLARLDKPIGTWLLAWPCMWSITMAAPRGHFPDFKMMALFGCGALLLRGAGCTV 157
+A + +L+R+D+PIG +LL WP + ++ +A P + +FG G +L+R AGC +
Sbjct: 15 RAWDFVQLSRMDRPIGIYLLLWPTLSAVWIAGNGS--PTLANVLIFGLGVVLMRAAGCCI 72
Query: 158 NDLLDRDIDNMVERTRLRPVASGLLTPFQGLSFLGFQLLLGLGILLQLNNFSRI--LGAS 215
ND DR +D V+RT RP+ASG + P + L+ F +L+G+ LL L SR L
Sbjct: 73 NDFADRKVDGHVKRTADRPLASGRVRPREALTL--FAILVGVSFLLVLCTNSRTVWLSFG 130
Query: 216 SLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWT--- 272
++ L F YP MKR+T++PQ LG ++WG + + A G L A + +YI+ + WT
Sbjct: 131 AVALAFCYPFMKRYTYYPQVVLGAAYSWGIPMAFTAAGGELP-AGAWLLYIANLLWTVGY 189
Query: 273 ------LDKEDDLKVGVKSTALRFGDSSKE 296
+D++DDLK+GVKSTA+ FGD+ +
Sbjct: 190 DTYYAMVDRDDDLKIGVKSTAILFGDADRS 219
>sp|A5WB34|UBIA_PSEP1 4-hydroxybenzoate octaprenyltransferase OS=Pseudomonas putida
(strain F1 / ATCC 700007) GN=ubiA PE=3 SV=1
Length = 296
Score = 145 bits (365), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 81/210 (38%), Positives = 126/210 (60%), Gaps = 16/210 (7%)
Query: 98 QARAYAKLARLDKPIGTWLLAWPCMWSITMAAPRGHFPDFKMMALFGCGALLLRGAGCTV 157
+A + +L+R+D+PIG +LL WP + ++ +A P + +FG G +L+R AGC +
Sbjct: 15 RAWDFVQLSRMDRPIGIYLLLWPTLSAVWIAGNGS--PTLANVLIFGLGVVLMRAAGCCI 72
Query: 158 NDLLDRDIDNMVERTRLRPVASGLLTPFQGLSFLGFQLLLGLGILLQLNNFSRI--LGAS 215
ND DR +D V+RT RP+ASG + P + L+ F +L+G+ LL L SR L
Sbjct: 73 NDFADRKVDGHVKRTADRPLASGRVRPREALTL--FAILVGVSFLLVLCTNSRTVWLSFG 130
Query: 216 SLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWT--- 272
++ L F YP MKR+T++PQ LG ++WG + + A G L A + +YI+ + WT
Sbjct: 131 AVALAFCYPFMKRYTYYPQVVLGAAYSWGIPMAFTAAGGELP-AGAWLLYIANLLWTVGY 189
Query: 273 ------LDKEDDLKVGVKSTALRFGDSSKE 296
+D++DDLK+GVKSTA+ FGD+ +
Sbjct: 190 DTYYAMVDRDDDLKIGVKSTAILFGDADRS 219
>sp|B1J454|UBIA_PSEPW 4-hydroxybenzoate octaprenyltransferase OS=Pseudomonas putida
(strain W619) GN=ubiA PE=3 SV=1
Length = 296
Score = 145 bits (365), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 133/231 (57%), Gaps = 12/231 (5%)
Query: 98 QARAYAKLARLDKPIGTWLLAWPCMWSITMAAPRGHFPDFKMMALFGCGALLLRGAGCTV 157
+A + +L+R+D+PIG +LL WP + ++ +A P + +FG G +L+R AGC +
Sbjct: 15 RAWDFIQLSRMDRPIGIYLLLWPTLTAVWIAGLGS--PTLANVLIFGLGVVLMRAAGCCI 72
Query: 158 NDLLDRDIDNMVERTRLRPVASGLLTPFQGLSFLGFQLLLGLGILLQLNNFSRILGASSL 217
ND DR +D V+RT RP+ASG + P + L+ G + + ++L N+ + L ++
Sbjct: 73 NDFADRKVDGHVKRTADRPLASGRVKPREALALFGILVAVSFLLVLCTNSKTVWLSFGAV 132
Query: 218 LLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWT----- 272
L F YP MKR+T++PQ LG ++WG + + A G L A + +YI+ + WT
Sbjct: 133 ALAFCYPFMKRYTYYPQVVLGAAYSWGIPMAFTAAGGELP-ASAWLLYIANLLWTVGYDT 191
Query: 273 ----LDKEDDLKVGVKSTALRFGDSSKEWTTGFGIACISSLALSGYNADIG 319
+D++DDLK+GVKSTA+ FG+S + + + L L+G ++G
Sbjct: 192 YYAMVDRDDDLKIGVKSTAILFGESDRMIILTLQMLSLGCLLLAGSRFELG 242
>sp|Q87F82|UBIA_XYLFT 4-hydroxybenzoate octaprenyltransferase OS=Xylella fastidiosa
(strain Temecula1 / ATCC 700964) GN=ubiA PE=3 SV=1
Length = 299
Score = 145 bits (365), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 118/200 (59%), Gaps = 12/200 (6%)
Query: 102 YAKLARLDKPIGTWLLAWPCMWSITMAAPRGHFPDFKMMALFGCGALLLRGAGCTVNDLL 161
Y KLAR D+P+G LL WP W++ +AA P + + +F G L R AGC +ND
Sbjct: 23 YWKLARGDRPVGFLLLLWPTWWALWLAA--DGVPPWWTLCVFTTGIWLTRSAGCVINDYT 80
Query: 162 DRDIDNMVERTRLRPVASGLLTPFQGLSFLGFQLLLGLGILLQLNNFSRILGASSLLLVF 221
DR +D VERT RP+ +G ++P L G +L+ G++L +N + +L + L L
Sbjct: 81 DRWLDPHVERTCTRPLVTGTVSPRNALLMFGTLMLIAFGLVLTMNRLTVLLSVAGLFLAM 140
Query: 222 SYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWT--------- 272
+YP +KR+T PQ YLG+ F WG + +AA++G + + + +Y++ + WT
Sbjct: 141 TYPYLKRYTHLPQVYLGIAFGWGIPMAFAAIQGKVP-TLAWLLYVANILWTTAYDTWYAM 199
Query: 273 LDKEDDLKVGVKSTALRFGD 292
+D++DD+K+G KSTA+ F D
Sbjct: 200 VDRDDDIKMGAKSTAILFAD 219
>sp|B2I675|UBIA_XYLF2 4-hydroxybenzoate octaprenyltransferase OS=Xylella fastidiosa
(strain M23) GN=ubiA PE=3 SV=1
Length = 299
Score = 145 bits (365), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 118/200 (59%), Gaps = 12/200 (6%)
Query: 102 YAKLARLDKPIGTWLLAWPCMWSITMAAPRGHFPDFKMMALFGCGALLLRGAGCTVNDLL 161
Y KLAR D+P+G LL WP W++ +AA P + + +F G L R AGC +ND
Sbjct: 23 YWKLARGDRPVGFLLLLWPTWWALWLAA--DGVPPWWTLCVFTTGIWLTRSAGCVINDYT 80
Query: 162 DRDIDNMVERTRLRPVASGLLTPFQGLSFLGFQLLLGLGILLQLNNFSRILGASSLLLVF 221
DR +D VERT RP+ +G ++P L G +L+ G++L +N + +L + L L
Sbjct: 81 DRWLDPHVERTCTRPLVTGTVSPRNALLMFGTLMLIAFGLVLTMNRLTVLLSVAGLFLAM 140
Query: 222 SYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWT--------- 272
+YP +KR+T PQ YLG+ F WG + +AA++G + + + +Y++ + WT
Sbjct: 141 TYPYLKRYTHLPQVYLGIAFGWGIPMAFAAIQGKVP-TLAWLLYVANILWTTAYDTWYAM 199
Query: 273 LDKEDDLKVGVKSTALRFGD 292
+D++DD+K+G KSTA+ F D
Sbjct: 200 VDRDDDIKMGAKSTAILFAD 219
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.138 0.442
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 124,697,909
Number of Sequences: 539616
Number of extensions: 5184249
Number of successful extensions: 16533
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 624
Number of HSP's successfully gapped in prelim test: 173
Number of HSP's that attempted gapping in prelim test: 15165
Number of HSP's gapped (non-prelim): 862
length of query: 338
length of database: 191,569,459
effective HSP length: 118
effective length of query: 220
effective length of database: 127,894,771
effective search space: 28136849620
effective search space used: 28136849620
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 61 (28.1 bits)