Your job contains 1 sequence.
>019627
MSFPNSSSPFLAQELQSYSAGSDAIGVWPQFSMSDEQQYDRLSQYDQQPPFKRPRNYEDN
ESNSATYPPMNPRMNPSMNLPINKGITNIFFKTRLCAKFKHGACRNGENCNFAHGMEDLR
QPPPNWQELVGGGRAEEDRSSGGNWDDDQKIIHKMKLCKKFYNGEECPYGDRCNFLHEDP
AKFRDDSGRYRESSAISIGTTGPPVVTGSCSNQAEGNRPVGSNCVKPVYWKTKLCIKWTQ
GQCPFGEKCHFAHGQSELQVIGGRTEGEAGNPSFISVKPQLVPANDSSPTAVLPTLNKEG
QGKQCLFKWKGPKKINRIYADWLDDMPLAHNLPSQVES
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 019627
(338 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2090669 - symbol:AT3G19360 species:3702 "Arabi... 445 3.7e-68 2
TAIR|locus:2028306 - symbol:AT1G32360 species:3702 "Arabi... 226 1.0e-23 2
TAIR|locus:2062476 - symbol:AT2G35430 species:3702 "Arabi... 249 3.0e-21 1
ZFIN|ZDB-GENE-030131-6366 - symbol:zgc:162730 "zgc:162730... 107 4.8e-11 3
TAIR|locus:2099292 - symbol:AT3G12130 species:3702 "Arabi... 118 5.9e-11 2
SGD|S000002558 - symbol:CTH1 "Member of the CCCH zinc fin... 108 5.0e-08 2
UNIPROTKB|Q6S9E0 - symbol:ZFP36 "Tristetraprolin" species... 100 8.0e-08 2
UNIPROTKB|P26651 - symbol:ZFP36 "Tristetraprolin" species... 98 1.1e-07 2
DICTYBASE|DDB_G0285973 - symbol:DDB_G0285973 "Butyrate re... 104 1.1e-07 2
MGI|MGI:99180 - symbol:Zfp36 "zinc finger protein 36" spe... 96 2.7e-07 2
UNIPROTKB|G3V2D5 - symbol:ZFP36L1 "Zinc finger protein 36... 95 3.2e-07 2
TAIR|locus:2170169 - symbol:AT5G06770 species:3702 "Arabi... 119 3.8e-07 2
UNIPROTKB|G3MWV8 - symbol:ZFP36 "Tristetraprolin" species... 93 5.0e-07 2
UNIPROTKB|P53781 - symbol:ZFP36 "Tristetraprolin" species... 93 5.0e-07 2
UNIPROTKB|Q0VCR3 - symbol:ZFP36 "Tristetraprolin" species... 93 5.0e-07 2
UNIPROTKB|D0VE66 - symbol:LOC100623625 "Tristetraprolin" ... 93 5.1e-07 2
RGD|620722 - symbol:Zfp36 "zinc finger protein 36" specie... 96 7.1e-07 2
UNIPROTKB|P47973 - symbol:Zfp36 "Tristetraprolin" species... 96 7.1e-07 2
WB|WBGene00003228 - symbol:mex-1 species:6239 "Caenorhabd... 97 7.6e-07 2
UNIPROTKB|G3V2P5 - symbol:ZFP36L1 "Zinc finger protein 36... 95 8.6e-07 2
UNIPROTKB|A4IIN5 - symbol:zfp36l2 "Zinc finger protein 36... 106 1.3e-06 2
UNIPROTKB|J9NTC7 - symbol:ZFP36 "Uncharacterized protein"... 93 1.9e-06 2
ZFIN|ZDB-GENE-020213-1 - symbol:mkrn1 "makorin, ring fing... 84 2.9e-06 3
ZFIN|ZDB-GENE-030131-2391 - symbol:zfp36l1b "zinc finger ... 96 3.0e-06 2
UNIPROTKB|C9IZP5 - symbol:MKRN1 "E3 ubiquitin-protein lig... 73 3.1e-06 2
ZFIN|ZDB-GENE-990806-20 - symbol:cth1 "cth1" species:7955... 133 3.5e-06 1
ZFIN|ZDB-GENE-030131-9860 - symbol:zfp36l1a "zinc finger ... 98 3.6e-06 2
UNIPROTKB|Q805B4 - symbol:zfp36l2-B "Zinc finger protein ... 97 4.3e-06 2
UNIPROTKB|P47974 - symbol:ZFP36L2 "Zinc finger protein 36... 100 4.7e-06 2
UNIPROTKB|E2RKS9 - symbol:ZFP36 "Uncharacterized protein"... 93 5.3e-06 2
UNIPROTKB|Q7ZXW9 - symbol:zfp36l2-A "Zinc finger protein ... 96 5.5e-06 2
UNIPROTKB|A7MB98 - symbol:ZFP36L1 "Uncharacterized protei... 95 5.8e-06 2
UNIPROTKB|E2R2W0 - symbol:ZFP36L1 "Uncharacterized protei... 95 5.8e-06 2
UNIPROTKB|Q07352 - symbol:ZFP36L1 "Zinc finger protein 36... 95 5.8e-06 2
UNIPROTKB|I3LB77 - symbol:ZFP36L1 "Uncharacterized protei... 95 5.8e-06 2
MGI|MGI:107946 - symbol:Zfp36l1 "zinc finger protein 36, ... 95 5.8e-06 2
RGD|62009 - symbol:Zfp36l1 "zinc finger protein 36, C3H t... 95 5.8e-06 2
UNIPROTKB|P17431 - symbol:Zfp36l1 "Zinc finger protein 36... 95 5.8e-06 2
TAIR|locus:2831040 - symbol:AT3G08505 species:3702 "Arabi... 87 6.2e-06 2
UNIPROTKB|F1S5I0 - symbol:ZFP36L2 "Uncharacterized protei... 95 6.6e-06 2
UNIPROTKB|E2RRA5 - symbol:MKRN1 "Uncharacterized protein"... 83 6.8e-06 3
UNIPROTKB|F1MV20 - symbol:F1MV20 "Uncharacterized protein... 93 8.0e-06 2
UNIPROTKB|J9NWC9 - symbol:ZFP36L2 "Uncharacterized protei... 93 1.1e-05 2
MGI|MGI:107945 - symbol:Zfp36l2 "zinc finger protein 36, ... 93 1.2e-05 2
TAIR|locus:2033384 - symbol:AT1G66810 species:3702 "Arabi... 94 1.5e-05 2
RGD|1308913 - symbol:Zfp36l2 "zinc finger protein 36, C3H... 93 1.5e-05 3
ZFIN|ZDB-GENE-030131-5873 - symbol:zfp36l2 "zinc finger p... 94 2.0e-05 2
TAIR|locus:2075676 - symbol:AT3G47120 species:3702 "Arabi... 126 2.7e-05 1
UNIPROTKB|F1LVT2 - symbol:F1LVT2 "Uncharacterized protein... 90 3.0e-05 2
TAIR|locus:2199352 - symbol:AT1G68200 species:3702 "Arabi... 89 3.3e-05 2
WB|WBGene00004078 - symbol:pos-1 species:6239 "Caenorhabd... 92 3.7e-05 2
WB|WBGene00009532 - symbol:ccch-1 species:6239 "Caenorhab... 88 5.3e-05 2
FB|FBgn0011837 - symbol:Tis11 "Tis11 homolog" species:722... 90 7.1e-05 2
RGD|1559581 - symbol:Zfp36l3 "zinc finger protein 36, C3H... 90 7.6e-05 2
ZFIN|ZDB-GENE-020213-2 - symbol:mkrn2 "makorin, ring fing... 76 8.7e-05 3
WB|WBGene00003231 - symbol:mex-6 species:6239 "Caenorhabd... 87 0.00011 2
SGD|S000004126 - symbol:TIS11 "mRNA-binding protein expre... 81 0.00013 2
ZFIN|ZDB-GENE-050913-48 - symbol:zgc:114130 "zgc:114130" ... 88 0.00023 2
CGD|CAL0004295 - symbol:orf19.5334 species:5476 "Candida ... 96 0.00026 2
WB|WBGene00003230 - symbol:mex-5 species:6239 "Caenorhabd... 84 0.00039 2
WB|WBGene00013319 - symbol:ccch-5 species:6239 "Caenorhab... 81 0.00060 2
WB|WBGene00007961 - symbol:C35D6.4 species:6239 "Caenorha... 82 0.00062 2
WB|WBGene00009539 - symbol:F38C2.7 species:6239 "Caenorha... 82 0.00062 2
UNIPROTKB|J9NRX8 - symbol:MKRN1 "Uncharacterized protein"... 67 0.00064 3
WB|WBGene00009537 - symbol:ccch-2 species:6239 "Caenorhab... 82 0.00066 2
UNIPROTKB|F1MF12 - symbol:MKRN1 "Uncharacterized protein"... 83 0.00068 2
WB|WBGene00003388 - symbol:moe-3 species:6239 "Caenorhabd... 82 0.00068 2
UNIPROTKB|F1MRH0 - symbol:MKRN1 "Uncharacterized protein"... 83 0.00069 2
MGI|MGI:1859353 - symbol:Mkrn1 "makorin, ring finger prot... 81 0.00071 2
UNIPROTKB|G3V789 - symbol:Mkrn1 "Protein Mkrn1" species:1... 80 0.00091 2
>TAIR|locus:2090669 [details] [associations]
symbol:AT3G19360 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0043687 "post-translational protein modification" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 EMBL:AB025624 HSSP:P47974
EMBL:AY037226 EMBL:AY081745 IPI:IPI00533341 RefSeq:NP_566631.1
UniGene:At.22994 ProteinModelPortal:Q9LT81 SMR:Q9LT81 IntAct:Q9LT81
PRIDE:Q9LT81 EnsemblPlants:AT3G19360.1 GeneID:821470
KEGG:ath:AT3G19360 TAIR:At3g19360 eggNOG:NOG138498
HOGENOM:HOG000090850 InParanoid:Q9LT81 OMA:RMCAKFR PhylomeDB:Q9LT81
ProtClustDB:CLSN2688560 Genevestigator:Q9LT81 Uniprot:Q9LT81
Length = 386
Score = 445 (161.7 bits), Expect = 3.7e-68, Sum P(2) = 3.7e-68
Identities = 97/204 (47%), Positives = 124/204 (60%)
Query: 117 EDLRQPPPNWQELVGGGRAEEDRSS-------GGNWDDDQKIIHKMKLCKKFYNGEECPY 169
+++ PPP Q+ E +R NW+DDQKII +MKLC+KF GEECPY
Sbjct: 141 QEIVGPPPAGQDRERERERERERERPSLAPVVNNNWEDDQKIILRMKLCRKFCFGEECPY 200
Query: 170 GDRCNFLHEDPAKFRDDSGRYRESSAISIGTTGPPVVTGSCSNQAEGNR----PV----- 220
GDRCNF+HED +KFR+DSG+ RESS IS+G T + + SN E NR PV
Sbjct: 201 GDRCNFIHEDLSKFREDSGKLRESSVISVGATAADQPSDTASNLIEVNRQGSIPVPAPMN 260
Query: 221 GSNCVKPVYWKTKLCIKWT-QGQCPFGEKCHFAHGQSELQVIGGRTEGEAGNPSFISVKP 279
VK VYWKT+LC+K+ GQCPFG+KCHFAHGQ+EL GR EGEA N + SV
Sbjct: 261 NGGVVKTVYWKTRLCMKFDITGQCPFGDKCHFAHGQAELHNSVGRVEGEAMN-AVASVNK 319
Query: 280 Q-LVPANDSSPTAVLPTLNKEGQG 302
Q +VPAN++ + + + G
Sbjct: 320 QAVVPANEAFAMKPITQVTADSSG 343
Score = 322 (118.4 bits), Expect = 3.3e-55, Sum P(2) = 3.3e-55
Identities = 85/211 (40%), Positives = 115/211 (54%)
Query: 146 DDDQKIIH-KM--KLC--KKFYNGEECPY--GDRCNFLHEDPAKFRDDSG-RYRESSAIS 197
DD + I+ K+ K C ++ G+ C + D F ED K R+ S ++A
Sbjct: 178 DDQKIILRMKLCRKFCFGEECPYGDRCNFIHEDLSKF-REDSGKLRESSVISVGATAADQ 236
Query: 198 IGTTGPPVVTGSCSNQAEGNRPVGSN-CVKPVYWKTKLCIKWT-QGQCPFGEKCHFAHGQ 255
T ++ + P+ + VK VYWKT+LC+K+ GQCPFG+KCHFAHGQ
Sbjct: 237 PSDTASNLIEVNRQGSIPVPAPMNNGGVVKTVYWKTRLCMKFDITGQCPFGDKCHFAHGQ 296
Query: 256 SELQVIGGRTEGEAGNPSFISVKPQ-LVPANDS---SP----TAVLPTLNKEGQGKQCLF 307
+EL GR EGEA N + SV Q +VPAN++ P TA LN+EG+ K+CL
Sbjct: 297 AELHNSVGRVEGEAMN-AVASVNKQAVVPANEAFAMKPITQVTADSSGLNEEGRRKKCLL 355
Query: 308 KWKGPKKINRIYADWLDDMPLAHNLPSQVES 338
KW KKINRIY DW+DD+P+ VES
Sbjct: 356 KWSDSKKINRIYGDWIDDLPVGQKSTKPVES 386
Score = 265 (98.3 bits), Expect = 3.7e-68, Sum P(2) = 3.7e-68
Identities = 56/113 (49%), Positives = 68/113 (60%)
Query: 32 SMSDEQQYDRLSQYDQQPPFKRPRNYEDNESNSATYXXXXXXXXXXXXXX-----INKGI 86
S+S+ Q + SQ QP KRPR +DN N A+ +NKG
Sbjct: 42 SLSESQSQSQPSQ-QLQPALKRPRLVDDNLFNPASSFPQPSSSNPWMVPSLNPPPVNKGT 100
Query: 87 TNIFFKTRLCAKFKHGACRNGENCNFAHGMEDLRQPPPNWQELVGGGRAEEDR 139
NIF+KTR+CAKF+ G CRNGE CNFAHG+EDLRQPP NWQE+VG A +DR
Sbjct: 101 ANIFYKTRMCAKFRAGTCRNGELCNFAHGIEDLRQPPSNWQEIVGPPPAGQDR 153
>TAIR|locus:2028306 [details] [associations]
symbol:AT1G32360 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 EMBL:AC007767 EMBL:AC084110
EMBL:AK118013 EMBL:AY056407 EMBL:AY081710 IPI:IPI00524758
PIR:D86448 RefSeq:NP_564396.1 UniGene:At.15521 UniGene:At.74086
HSSP:P47974 ProteinModelPortal:Q9LQM3 SMR:Q9LQM3 PaxDb:Q9LQM3
PRIDE:Q9LQM3 EnsemblPlants:AT1G32360.1 GeneID:840128
KEGG:ath:AT1G32360 TAIR:At1g32360 eggNOG:NOG288218
HOGENOM:HOG000242590 InParanoid:Q9LQM3 OMA:PREEFQI PhylomeDB:Q9LQM3
ProtClustDB:CLSN2688195 Genevestigator:Q9LQM3 Uniprot:Q9LQM3
Length = 384
Score = 226 (84.6 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
Identities = 55/141 (39%), Positives = 69/141 (48%)
Query: 154 KMKLCKKFYNGEECPYGDRCNFLHEDPAKFRDD------SGRYRE-----SSAISIGTTG 202
K + CKKFY E CPYG+ C FLH++ ++ R+ G Y S S+G G
Sbjct: 174 KGRHCKKFYTEEGCPYGESCTFLHDEASRNRESVAISLGPGGYGSGGGGGSGGGSVGGGG 233
Query: 203 PP---VVTGSCSNQAEGNRPVGSNCVKPVYWKTKLCIKWT-QGQCPFGEKCHFAHGQSEL 258
VV G G+ G +KP WKT++C KW G CPFG KCHFAHG +EL
Sbjct: 234 SSSNVVVLGGGGGSGSGS---GIQILKPSNWKTRICNKWEITGYCPFGAKCHFAHGAAEL 290
Query: 259 QVIGGRTEGEAGNPSFISVKP 279
GG E G +S P
Sbjct: 291 HRFGGGLVEEEGKDG-VSPNP 310
Score = 198 (74.8 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 66/197 (33%), Positives = 88/197 (44%)
Query: 40 DRLSQYDQQPPFKRPRNYEDNESNSATYXXXXXXXXXXXXXXINKGITNIFFKTRLCAKF 99
D S + PP K+ R S+SAT K I +FFKT+LC KF
Sbjct: 51 DNTSGDNNGPPNKKTRG--SPSSSSATTTSAASNRT--------KAIGKMFFKTKLCCKF 100
Query: 100 KHGACRNGENCNFAHGMEDLRQPPPNWQELVGGGRAEEDRSSG-GN---------WDDDQ 149
+ G C NCNFAH +E+LR+PPPNWQE+V EE+RS G G ++ Q
Sbjct: 101 RAGTCPYITNCNFAHTVEELRRPPPNWQEIVAAH--EEERSGGMGTPTVSVVEIPREEFQ 158
Query: 150 --KIIHKMKLCKKFYNGEECP--YGDR-CNFLHEDPAKFRDDSGRYRESSAISIGTTGPP 204
++ + + G C Y + C + E D++ R RES AIS+G G
Sbjct: 159 IPSLVSSTAESGRSFKGRHCKKFYTEEGCPY-GESCTFLHDEASRNRESVAISLGPGG-- 215
Query: 205 VVTGSCSNQAEGNRPVG 221
GS G VG
Sbjct: 216 --YGSGGGGGSGGGSVG 230
Score = 107 (42.7 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 30/117 (25%), Positives = 52/117 (44%)
Query: 200 TTGPPVVTGSCSNQAEGNRPVGSNCVKPVYWKTKLCIKWTQGQCPFGEKCHFAHGQSEL- 258
T G P + + + A NR + + +++KTKLC K+ G CP+ C+FAH EL
Sbjct: 65 TRGSPSSSSATTTSAASNR---TKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHTVEELR 121
Query: 259 -------QVIGGRTEGEAGNPSFISVKPQLVPANDSS-PTAVLPTLN--KEGQGKQC 305
+++ E +G +V +P + P+ V T + +G+ C
Sbjct: 122 RPPPNWQEIVAAHEEERSGGMGTPTVSVVEIPREEFQIPSLVSSTAESGRSFKGRHC 178
Score = 91 (37.1 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
Identities = 14/19 (73%), Positives = 17/19 (89%)
Query: 308 KWKGPKKINRIYADWLDDM 326
KWKGP KI+RIY DW+DD+
Sbjct: 365 KWKGPAKISRIYGDWIDDI 383
Score = 85 (35.0 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 22/61 (36%), Positives = 32/61 (52%)
Query: 91 FKTRLCAKFK-HGACRNGENCNFAHGMEDLRQPPPNWQELVGGGRAEEDRSSGGNWDDDQ 149
+KTR+C K++ G C G C+FAHG +L + GGG EE+ G + + D
Sbjct: 261 WKTRICNKWEITGYCPFGAKCHFAHGAAELHR--------FGGGLVEEEGKDGVSPNPDT 312
Query: 150 K 150
K
Sbjct: 313 K 313
>TAIR|locus:2062476 [details] [associations]
symbol:AT2G35430 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 EMBL:AC005314 HSSP:P47974
HOGENOM:HOG000242590 EMBL:BT020232 EMBL:BT020553 IPI:IPI00545818
PIR:E84768 RefSeq:NP_181086.2 UniGene:At.49567
ProteinModelPortal:Q5PP65 SMR:Q5PP65 PaxDb:Q5PP65 PRIDE:Q5PP65
EnsemblPlants:AT2G35430.1 GeneID:818109 KEGG:ath:AT2G35430
TAIR:At2g35430 eggNOG:NOG298782 InParanoid:Q5PP65 OMA:PDKISRV
PhylomeDB:Q5PP65 ProtClustDB:CLSN2915129 Genevestigator:Q5PP65
Uniprot:Q5PP65
Length = 252
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 78/227 (34%), Positives = 104/227 (45%)
Query: 126 WQELVGGGRAEEDRSSGGNWDDDQKIIHKMKLCKKFYNGEECPYG-DRCNFLH--ED--- 179
W G + ++ + + K K KLC KF G CPY C+F H E+
Sbjct: 45 WAINSDGAESPSKKTRSSSSSEIGKSFFKTKLCFKFRAGT-CPYSASSCHFAHSAEELRL 103
Query: 180 ----PAKFRD---DSGRYRESSAISIGTTGPPVVTGSCSNQAEGNRPVGSNCVKPVYWKT 232
P +++ ++ R RES A+S+G G N A+ +K WKT
Sbjct: 104 PPPPPPNWQETVTEASRNRESFAVSLGPRG---------NVAQ--------TLKSPNWKT 146
Query: 233 KLCIKW-TQGQCPFGEKCHFAHGQSELQVIGGR-TEGEA--GNPSFISVKPQ-------- 280
++C KW T G CPFG CHFAHG SEL GG EGE G + + K +
Sbjct: 147 RICNKWQTTGYCPFGSHCHFAHGPSELHTFGGGLVEGECKIGTSATLDTKQRGQVDTVTS 206
Query: 281 LV-PANDSSPTAVLPTLNKEGQGKQCLFKWKGPKKINRIYADWLDDM 326
LV P S T+ T G Q KWKGP KI+R+Y DW+DD+
Sbjct: 207 LVSPGVSSQRTSSAVTQKPNGVRTQR--KWKGPDKISRVYGDWIDDI 251
Score = 179 (68.1 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 47/122 (38%), Positives = 62/122 (50%)
Query: 90 FFKTRLCAKFKHGACR-NGENCNFAHGMEDLR---QPPPNWQELVG-GGRAEEDR--SSG 142
FFKT+LC KF+ G C + +C+FAH E+LR PPPNWQE V R E S G
Sbjct: 71 FFKTKLCFKFRAGTCPYSASSCHFAHSAEELRLPPPPPPNWQETVTEASRNRESFAVSLG 130
Query: 143 --GNWDDDQKIIH-KMKLCKKFYNGEECPYGDRCNFLHEDPAKFRDDSGRYRESSAISIG 199
GN K + K ++C K+ CP+G C+F H P++ G E IG
Sbjct: 131 PRGNVAQTLKSPNWKTRICNKWQTTGYCPFGSHCHFAH-GPSELHTFGGGLVEGEC-KIG 188
Query: 200 TT 201
T+
Sbjct: 189 TS 190
>ZFIN|ZDB-GENE-030131-6366 [details] [associations]
symbol:zgc:162730 "zgc:162730" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
ZFIN:ZDB-GENE-030131-6366 GO:GO:0008270 GO:GO:0003676
HOGENOM:HOG000233479 EMBL:BC139894 IPI:IPI00933596
UniGene:Dr.106159 STRING:A5D6V0 HOVERGEN:HBG105016
InParanoid:A5D6V0 OrthoDB:EOG4PK294 ArrayExpress:A5D6V0
Uniprot:A5D6V0
Length = 336
Score = 107 (42.7 bits), Expect = 4.8e-11, Sum P(3) = 4.8e-11
Identities = 25/81 (30%), Positives = 37/81 (45%)
Query: 153 HKMKLCKKFYNGEECPYGDRCNFLHEDPAKFRDDSGRYRESSAISIGTT---GPPVVTGS 209
+K + C+ FY CPYG RC+F+HE+ + + + R S G T PP S
Sbjct: 151 YKTQACRTFYQFGYCPYGSRCHFIHEEKSSLSEQNPRQLRQSVSFAGFTRSSSPPSSYES 210
Query: 210 CS-NQAEGNRPVGSNCVKPVY 229
S +A P + PV+
Sbjct: 211 LSFTRAPSVSPPPEEILSPVF 231
Score = 94 (38.1 bits), Expect = 4.8e-11, Sum P(3) = 4.8e-11
Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 91 FKTRLCAKFK-HGACRNGENCNFAHGMEDLR 120
+KT LC F+ HG+C+ G C FAHG +LR
Sbjct: 113 YKTELCRSFQEHGSCKYGAKCQFAHGENELR 143
Score = 56 (24.8 bits), Expect = 4.8e-11, Sum P(3) = 4.8e-11
Identities = 20/57 (35%), Positives = 25/57 (43%)
Query: 2 SFPN--SSSPFLAQELQSYSAGSDAIGVWPQF------SMSDEQQYDRLSQYDQQPP 50
SFPN SSS L + + SD PQF SMS + R+ +D PP
Sbjct: 43 SFPNLSSSSDRLIDDCWPVDSWSDRAPSKPQFPIKADRSMSLNDSFSRMKPHDVPPP 99
>TAIR|locus:2099292 [details] [associations]
symbol:AT3G12130 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR000571 InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 Pfam:PF00642 PROSITE:PS50084
PROSITE:PS50103 SMART:SM00322 SMART:SM00356 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0003677 EMBL:AC069473
GO:GO:0008270 GO:GO:0003700 GO:GO:0003723 EMBL:AP002063 HSSP:P47974
EMBL:BT025032 EMBL:AK227373 EMBL:AY085746 IPI:IPI00526274
RefSeq:NP_566412.1 UniGene:At.27694 ProteinModelPortal:Q9C7C3
SMR:Q9C7C3 PaxDb:Q9C7C3 PRIDE:Q9C7C3 EnsemblPlants:AT3G12130.1
GeneID:820388 KEGG:ath:AT3G12130 TAIR:At3g12130 eggNOG:NOG319230
HOGENOM:HOG000238868 InParanoid:Q9C7C3 OMA:LAIRDHE PhylomeDB:Q9C7C3
ProtClustDB:CLSN2686893 Genevestigator:Q9C7C3 Uniprot:Q9C7C3
Length = 248
Score = 118 (46.6 bits), Expect = 5.9e-11, Sum P(2) = 5.9e-11
Identities = 22/49 (44%), Positives = 34/49 (69%)
Query: 214 AEGNRPVGSNCVKPVYWKTKLCIKWTQGQCPFGEKCHFAHGQSELQVIG 262
+EG GSN +KTK+C ++++G C FG++CHFAHG++EL+ G
Sbjct: 204 SEGKPHPGSN------FKTKICERFSKGNCTFGDRCHFAHGEAELRKSG 246
Score = 96 (38.9 bits), Expect = 5.9e-11, Sum P(2) = 5.9e-11
Identities = 23/64 (35%), Positives = 32/64 (50%)
Query: 154 KMKLCKKFYNGEECPYGDRCNFLHEDPAKFRDDSGRYRESSAISIGTTGPPVVTGSCSNQ 213
K K C KF++ CP+G+ C+FLH P G Y S ++ GPP+ S + Q
Sbjct: 38 KSKPCTKFFSTSGCPFGENCHFLHYVP-------GGYNAVSQMT--NMGPPIPQVSRNMQ 88
Query: 214 AEGN 217
GN
Sbjct: 89 GSGN 92
Score = 60 (26.2 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 87 TNIFFKTRLCAKF-KHGACRNGENCNFAH 114
T + K++ C KF C GENC+F H
Sbjct: 33 TGLGSKSKPCTKFFSTSGCPFGENCHFLH 61
>SGD|S000002558 [details] [associations]
symbol:CTH1 "Member of the CCCH zinc finger family"
species:4932 "Saccharomyces cerevisiae" [GO:0006879 "cellular iron
ion homeostasis" evidence=IGI] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IC] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=IGI] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003729 "mRNA binding" evidence=ISS] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 SGD:S000002558
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 GO:GO:0003729
EMBL:BK006938 GO:GO:0006879 GO:GO:0000956 eggNOG:COG5063
EMBL:L42133 EMBL:Z50046 EMBL:AY557690 PIR:S57977 RefSeq:NP_010435.1
ProteinModelPortal:P47976 SMR:P47976 DIP:DIP-1784N IntAct:P47976
MINT:MINT-385004 STRING:P47976 EnsemblFungi:YDR151C GeneID:851729
KEGG:sce:YDR151C CYGD:YDR151c GeneTree:ENSGT00530000063262
HOGENOM:HOG000001038 OMA:EIEEYYI OrthoDB:EOG4W3WXK NextBio:969448
Genevestigator:P47976 GermOnline:YDR151C Uniprot:P47976
Length = 325
Score = 108 (43.1 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 18/63 (28%), Positives = 37/63 (58%)
Query: 230 WKTKLCIKWTQ-GQCPFGEKCHFAHGQS-ELQVIGGRTEGEAGNPSFISVKPQLVPANDS 287
++TK CI W++ G CP+G++C F HG ++++ +G + + + + L P+N+
Sbjct: 243 YRTKPCINWSKLGYCPYGKRCCFKHGDDKDVEIYQNANDGRSKDTALTPLPTSLAPSNND 302
Query: 288 SPT 290
+ T
Sbjct: 303 NIT 305
Score = 84 (34.6 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 86 ITNIFFKTRLCAKFK-HGACRNGENCNFAHGMEDLR 120
+ +KT LC F G C+ G C FAHG+ +L+
Sbjct: 200 VNKTLYKTELCESFTIKGYCKYGNKCQFAHGLNELK 235
>UNIPROTKB|Q6S9E0 [details] [associations]
symbol:ZFP36 "Tristetraprolin" species:9940 "Ovis aries"
[GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0006402 "mRNA catabolic process" evidence=ISS]
[GO:0006950 "response to stress" evidence=ISS] [GO:0010494
"cytoplasmic stress granule" evidence=ISS] [GO:0017091 "AU-rich
element binding" evidence=ISS] [GO:0032680 "regulation of tumor
necrosis factor production" evidence=ISS] [GO:0060213 "positive
regulation of nuclear-transcribed mRNA poly(A) tail shortening"
evidence=ISS] [GO:0070935 "3'-UTR-mediated mRNA stabilization"
evidence=ISS] [GO:0071889 "14-3-3 protein binding" evidence=ISS]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0005634 GO:GO:0006950 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0017091 GO:GO:0006402 GO:GO:0071889
GO:GO:0010494 GO:GO:0060213 GO:GO:0070935 GO:GO:0032680
HOVERGEN:HBG008483 CTD:7538 EMBL:AY462109 RefSeq:NP_001009765.1
UniGene:Oar.1075 ProteinModelPortal:Q6S9E0 SMR:Q6S9E0 GeneID:443283
Uniprot:Q6S9E0
Length = 325
Score = 100 (40.3 bits), Expect = 8.0e-08, Sum P(2) = 8.0e-08
Identities = 19/37 (51%), Positives = 23/37 (62%)
Query: 87 TNIFFKTRLCAKFKH-GACRNGENCNFAHGMEDLRQP 122
T+ +KT LC F G CR G C FAHG+ +LRQP
Sbjct: 98 TSSRYKTELCRTFSESGRCRYGAKCQFAHGLGELRQP 134
Score = 91 (37.1 bits), Expect = 8.0e-08, Sum P(2) = 8.0e-08
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 153 HKMKLCKKFYNGEECPYGDRCNFLHEDPAK 182
+K +LC KFY CPYG RC+F+H +P++
Sbjct: 140 YKTELCHKFYLQGRCPYGSRCHFIH-NPSE 168
>UNIPROTKB|P26651 [details] [associations]
symbol:ZFP36 "Tristetraprolin" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0000289 "nuclear-transcribed mRNA
poly(A) tail shortening" evidence=IEA] [GO:0007243 "intracellular
protein kinase cascade" evidence=IEA] [GO:0035925 "mRNA 3'-UTR
AU-rich region binding" evidence=IEA] [GO:0045638 "negative
regulation of myeloid cell differentiation" evidence=IEA]
[GO:0050728 "negative regulation of inflammatory response"
evidence=IEA] [GO:0050779 "RNA destabilization" evidence=IEA]
[GO:0017091 "AU-rich element binding" evidence=IMP;IDA] [GO:0006402
"mRNA catabolic process" evidence=IDA] [GO:0060213 "positive
regulation of nuclear-transcribed mRNA poly(A) tail shortening"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0019957 "C-C chemokine binding"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0019901 "protein kinase binding"
evidence=IPI] [GO:0006950 "response to stress" evidence=IDA]
[GO:0010494 "cytoplasmic stress granule" evidence=IDA] [GO:0071889
"14-3-3 protein binding" evidence=IDA] [GO:0032680 "regulation of
tumor necrosis factor production" evidence=IDA] [GO:0070935
"3'-UTR-mediated mRNA stabilization" evidence=IDA] [GO:1900153
"positive regulation of nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=ISS] [GO:0035278 "negative
regulation of translation involved in gene silencing by miRNA"
evidence=ISS] [GO:0003727 "single-stranded RNA binding"
evidence=TAS] [GO:0003729 "mRNA binding" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA;TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0005829
GO:GO:0005634 GO:GO:0010467 GO:GO:0006950 GO:GO:0046872
GO:GO:0003677 GO:GO:0050728 GO:GO:0008270 GO:GO:0003729
GO:GO:0003727 GO:GO:0007243 GO:GO:0017091 GO:GO:0000122
GO:GO:0006402 GO:GO:0071889 GO:GO:0010494 GO:GO:0060213
eggNOG:COG5063 GO:GO:0000289 GO:GO:0045638 GO:GO:0070935
GO:GO:0032680 GO:GO:0050779 HOGENOM:HOG000233479 HOVERGEN:HBG008483
CTD:7538 KO:K15308 EMBL:M92843 EMBL:M92844 EMBL:M63625
EMBL:AK314042 EMBL:AY771351 EMBL:BC009693 IPI:IPI00000893
PIR:S34427 RefSeq:NP_003398.2 UniGene:Hs.534052
ProteinModelPortal:P26651 SMR:P26651 DIP:DIP-29845N IntAct:P26651
MINT:MINT-1171915 STRING:P26651 PhosphoSite:P26651 DMDM:136471
PRIDE:P26651 DNASU:7538 Ensembl:ENST00000248673 GeneID:7538
KEGG:hsa:7538 UCSC:uc002olh.1 GeneCards:GC19P039897 HGNC:HGNC:12862
HPA:HPA006009 MIM:190700 neXtProt:NX_P26651 PharmGKB:PA37451
InParanoid:P26651 OMA:RRLPIFN OrthoDB:EOG4S4PH4 PhylomeDB:P26651
ChiTaRS:ZFP36 GenomeRNAi:7538 NextBio:29497 Bgee:P26651
CleanEx:HS_ZFP36 Genevestigator:P26651 GermOnline:ENSG00000128016
Uniprot:P26651
Length = 326
Score = 98 (39.6 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 18/32 (56%), Positives = 23/32 (71%)
Query: 227 PVYWKTKLCIK-WTQGQCPFGEKCHFAHGQSE 257
P Y KT+LC K + QG+CP+G +CHF H SE
Sbjct: 140 PKY-KTELCHKFYLQGRCPYGSRCHFIHNPSE 170
Score = 92 (37.4 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 17/32 (53%), Positives = 20/32 (62%)
Query: 91 FKTRLCAKFKH-GACRNGENCNFAHGMEDLRQ 121
+KT LC F G CR G C FAHG+ +LRQ
Sbjct: 104 YKTELCRTFSESGRCRYGAKCQFAHGLGELRQ 135
Score = 91 (37.1 bits), Expect = 6.7e-07, Sum P(2) = 6.7e-07
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 153 HKMKLCKKFYNGEECPYGDRCNFLHEDPAK 182
+K +LC KFY CPYG RC+F+H +P++
Sbjct: 142 YKTELCHKFYLQGRCPYGSRCHFIH-NPSE 170
Score = 65 (27.9 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 153 HKMKLCKKFYNGEECPYGDRCNFLH 177
+K +LC+ F C YG +C F H
Sbjct: 104 YKTELCRTFSESGRCRYGAKCQFAH 128
>DICTYBASE|DDB_G0285973 [details] [associations]
symbol:DDB_G0285973 "Butyrate response factor 2"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 dictyBase:DDB_G0285973 GO:GO:0008270 GO:GO:0003676
EMBL:AAFI02000082 eggNOG:COG5063 RefSeq:XP_637949.2
ProteinModelPortal:Q54MG5 SMR:Q54MG5 EnsemblProtists:DDB0218764
GeneID:8625376 KEGG:ddi:DDB_G0285973 InParanoid:Q54MG5 OMA:WSSDEAS
Uniprot:Q54MG5
Length = 437
Score = 104 (41.7 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 33/110 (30%), Positives = 45/110 (40%)
Query: 153 HKMKLCKKFYNGEECPYGDRCNFLH-EDPAKFRDDSGRYRESSAISIGTTGPPVVTGSCS 211
+K + CK FY+ CPYG RC F+H DP + + S G+ PP T + +
Sbjct: 234 YKTETCKTFYSIGSCPYGSRCRFIHTRDP----ELPIHLMSQLSTSSGSISPPNQTSNNN 289
Query: 212 NQA-EGNRPVGSNCVKPVYWKTKLCIKWTQGQCP-FGEKCHFAHGQSELQ 259
N GN S + + KT + Q P H Q ELQ
Sbjct: 290 NNTTNGNNTPASFATEVLLSKTIVPQMIRQHSSPQLQTPLHILQQQKELQ 339
Score = 89 (36.4 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 91 FKTRLCAKFKH-GACRNGENCNFAHGMEDLR 120
+KT LC F+ G CR G C FAHG ++LR
Sbjct: 196 YKTELCRSFQETGVCRYGLKCQFAHGRDELR 226
>MGI|MGI:99180 [details] [associations]
symbol:Zfp36 "zinc finger protein 36" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO;IMP] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=IDA] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003729 "mRNA binding" evidence=ISO;IDA]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO;IDA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IGI] [GO:0006402 "mRNA catabolic process"
evidence=ISO] [GO:0006950 "response to stress" evidence=ISO]
[GO:0007243 "intracellular protein kinase cascade" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0010494
"cytoplasmic stress granule" evidence=ISO] [GO:0017091 "AU-rich
element binding" evidence=ISO;IDA] [GO:0019901 "protein kinase
binding" evidence=ISO] [GO:0019957 "C-C chemokine binding"
evidence=ISO] [GO:0032680 "regulation of tumor necrosis factor
production" evidence=ISO] [GO:0035925 "mRNA 3'-UTR AU-rich region
binding" evidence=IDA] [GO:0043488 "regulation of mRNA stability"
evidence=IDA] [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0050728 "negative regulation of inflammatory
response" evidence=IMP] [GO:0050779 "RNA destabilization"
evidence=IMP] [GO:0060213 "positive regulation of
nuclear-transcribed mRNA poly(A) tail shortening" evidence=ISO]
[GO:0070935 "3'-UTR-mediated mRNA stabilization" evidence=ISO]
[GO:0071889 "14-3-3 protein binding" evidence=ISO]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
MGI:MGI:99180 GO:GO:0005829 GO:GO:0005634 GO:GO:0006950
GO:GO:0046872 GO:GO:0003677 GO:GO:0050728 GO:GO:0008270
GO:GO:0007243 GO:GO:0000122 GO:GO:0071889 GO:GO:0010494
GO:GO:0060213 eggNOG:COG5063 GO:GO:0000289 GO:GO:0045638
GO:GO:0070935 GO:GO:0032680 GO:GO:0035925 GO:GO:0050779
HOGENOM:HOG000233479 HOVERGEN:HBG008483 CTD:7538 KO:K15308
OMA:RRLPIFN OrthoDB:EOG4S4PH4 EMBL:M57422 EMBL:M58691 EMBL:X14678
EMBL:M58565 EMBL:L42317 EMBL:BC021391 IPI:IPI00132695 PIR:A36600
PIR:S04743 RefSeq:NP_035886.1 UniGene:Mm.389856 PDB:1M9O
PDBsum:1M9O ProteinModelPortal:P22893 SMR:P22893 IntAct:P22893
MINT:MINT-225240 STRING:P22893 PhosphoSite:P22893 PRIDE:P22893
Ensembl:ENSMUST00000051241 GeneID:22695 KEGG:mmu:22695
InParanoid:P22893 EvolutionaryTrace:P22893 NextBio:303151
Bgee:P22893 CleanEx:MM_ZFP36 Genevestigator:P22893
GermOnline:ENSMUSG00000044786 Uniprot:P22893
Length = 319
Score = 96 (38.9 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 227 PVYWKTKLCIK-WTQGQCPFGEKCHFAHGQSELQVIGGR 264
P Y KT+LC K + QG+CP+G +CHF H +E + G+
Sbjct: 132 PKY-KTELCHKFYLQGRCPYGSRCHFIHNPTEDLALPGQ 169
Score = 90 (36.7 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 87 TNIFFKTRLCAKFKH-GACRNGENCNFAHGMEDLRQ 121
T+ +KT LC + G CR G C FAHG+ +LRQ
Sbjct: 92 TSSRYKTELCRTYSESGRCRYGAKCQFAHGLGELRQ 127
Score = 90 (36.7 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 14/25 (56%), Positives = 18/25 (72%)
Query: 153 HKMKLCKKFYNGEECPYGDRCNFLH 177
+K +LC KFY CPYG RC+F+H
Sbjct: 134 YKTELCHKFYLQGRCPYGSRCHFIH 158
Score = 62 (26.9 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 153 HKMKLCKKFYNGEECPYGDRCNFLH 177
+K +LC+ + C YG +C F H
Sbjct: 96 YKTELCRTYSESGRCRYGAKCQFAH 120
>UNIPROTKB|G3V2D5 [details] [associations]
symbol:ZFP36L1 "Zinc finger protein 36, C3H1 type-like 1"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000288 "nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0033077 "T cell differentiation in
thymus" evidence=IEA] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 GO:GO:0005829 GO:GO:0005634
GO:GO:0006417 GO:GO:0008270 GO:GO:0003729 GO:GO:0017091
GO:GO:0033077 GO:GO:0001570 GO:GO:0000288 HGNC:HGNC:1107
ChiTaRS:ZFP36L1 InterPro:IPR007635 Pfam:PF04553 EMBL:AL132986
ProteinModelPortal:G3V2D5 SMR:G3V2D5 Ensembl:ENST00000557022
ArrayExpress:G3V2D5 Bgee:G3V2D5 Uniprot:G3V2D5
Length = 176
Score = 95 (38.5 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 91 FKTRLCAKFK-HGACRNGENCNFAHGMEDLR 120
+KT LC F+ +GAC+ G+ C FAHG+ +LR
Sbjct: 93 YKTELCRPFEENGACKYGDKCQFAHGIHELR 123
Score = 79 (32.9 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 153 HKMKLCKKFYNGEECPYGDRCNFLH 177
+K +LC+ F+ CPYG RC+F+H
Sbjct: 131 YKTELCRTFHTIGFCPYGPRCHFIH 155
>TAIR|locus:2170169 [details] [associations]
symbol:AT5G06770 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR000571 InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 Pfam:PF00642 Pfam:PF13014
PROSITE:PS50084 PROSITE:PS50103 SMART:SM00322 SMART:SM00356
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0003723 HSSP:P22893
HOGENOM:HOG000238868 ProtClustDB:CLSN2686893 EMBL:AP002032
EMBL:AK117974 EMBL:BT005260 EMBL:AY086759 IPI:IPI00547673
RefSeq:NP_196295.1 UniGene:At.43568 ProteinModelPortal:Q9FG30
SMR:Q9FG30 IntAct:Q9FG30 PaxDb:Q9FG30 PRIDE:Q9FG30
EnsemblPlants:AT5G06770.1 GeneID:830566 KEGG:ath:AT5G06770
TAIR:At5g06770 eggNOG:NOG124614 InParanoid:Q9FG30 OMA:HPGSNYK
PhylomeDB:Q9FG30 Genevestigator:Q9FG30 Uniprot:Q9FG30
Length = 240
Score = 119 (46.9 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 29/76 (38%), Positives = 42/76 (55%)
Query: 187 SGRYRESSAISIGTTGPPVVTGSCSNQAEGNRPVGSNCVKPVYWKTKLCIKWTQGQCPFG 246
SG RE +G+ P G EG GSN +KTK+C ++++G C +G
Sbjct: 174 SGMVRELIG-RLGSVKKPQGIGG----PEGKPHPGSN------YKTKICDRYSKGNCTYG 222
Query: 247 EKCHFAHGQSELQVIG 262
++CHFAHG+SEL+ G
Sbjct: 223 DRCHFAHGESELRRSG 238
Score = 57 (25.1 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 87 TNIFFKTRLCAKF-KHGACRNGENCNFAH 114
T + K++ C KF C G+NC+F H
Sbjct: 33 TGLGSKSKPCTKFFSTSGCPFGDNCHFLH 61
>UNIPROTKB|G3MWV8 [details] [associations]
symbol:ZFP36 "Tristetraprolin" species:9913 "Bos taurus"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 GO:GO:0008270 GO:GO:0003676
GeneTree:ENSGT00530000063262 EMBL:DAAA02047057 EMBL:DAAA02047055
EMBL:DAAA02047056 Ensembl:ENSBTAT00000011308 Uniprot:G3MWV8
Length = 324
Score = 93 (37.8 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 87 TNIFFKTRLCAKFKH-GACRNGENCNFAHGMEDLRQ 121
T+ +KT LC F G CR G C FAHG+ +LRQ
Sbjct: 98 TSSRYKTELCRTFSESGRCRYGAKCQFAHGLGELRQ 133
Score = 91 (37.1 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 153 HKMKLCKKFYNGEECPYGDRCNFLHEDPAK 182
+K +LC KFY CPYG RC+F+H +P++
Sbjct: 140 YKTELCHKFYLQGRCPYGSRCHFIH-NPSE 168
>UNIPROTKB|P53781 [details] [associations]
symbol:ZFP36 "Tristetraprolin" species:9913 "Bos taurus"
[GO:0070935 "3'-UTR-mediated mRNA stabilization" evidence=ISS]
[GO:0010494 "cytoplasmic stress granule" evidence=ISS] [GO:0071889
"14-3-3 protein binding" evidence=ISS] [GO:0032680 "regulation of
tumor necrosis factor production" evidence=ISS] [GO:0006950
"response to stress" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0060213
"positive regulation of nuclear-transcribed mRNA poly(A) tail
shortening" evidence=ISS] [GO:0006402 "mRNA catabolic process"
evidence=ISS] [GO:0017091 "AU-rich element binding" evidence=ISS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 GO:GO:0005634 GO:GO:0006950
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0017091
GO:GO:0006402 GO:GO:0071889 GO:GO:0010494 GO:GO:0060213
GO:GO:0070935 GO:GO:0032680 HOVERGEN:HBG008483 EMBL:L42319
IPI:IPI00698292 RefSeq:NP_776918.1 UniGene:Bt.3863
ProteinModelPortal:P53781 SMR:P53781 PRIDE:P53781 GeneID:282127
KEGG:bta:282127 CTD:7538 KO:K15308 NextBio:20805964 Uniprot:P53781
Length = 324
Score = 93 (37.8 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 87 TNIFFKTRLCAKFKH-GACRNGENCNFAHGMEDLRQ 121
T+ +KT LC F G CR G C FAHG+ +LRQ
Sbjct: 98 TSSRYKTELCRTFSESGRCRYGAKCQFAHGLGELRQ 133
Score = 91 (37.1 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 153 HKMKLCKKFYNGEECPYGDRCNFLHEDPAK 182
+K +LC KFY CPYG RC+F+H +P++
Sbjct: 140 YKTELCHKFYLQGRCPYGSRCHFIH-NPSE 168
>UNIPROTKB|Q0VCR3 [details] [associations]
symbol:ZFP36 "Tristetraprolin" species:9913 "Bos taurus"
[GO:0071889 "14-3-3 protein binding" evidence=IEA] [GO:0070935
"3'-UTR-mediated mRNA stabilization" evidence=IEA] [GO:0060213
"positive regulation of nuclear-transcribed mRNA poly(A) tail
shortening" evidence=IEA] [GO:0050779 "RNA destabilization"
evidence=IEA] [GO:0050728 "negative regulation of inflammatory
response" evidence=IEA] [GO:0045638 "negative regulation of myeloid
cell differentiation" evidence=IEA] [GO:0035925 "mRNA 3'-UTR
AU-rich region binding" evidence=IEA] [GO:0032680 "regulation of
tumor necrosis factor production" evidence=IEA] [GO:0019957 "C-C
chemokine binding" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
evidence=IEA] [GO:0007243 "intracellular protein kinase cascade"
evidence=IEA] [GO:0006950 "response to stress" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000289 "nuclear-transcribed mRNA poly(A) tail
shortening" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0005829
GO:GO:0005634 GO:GO:0006950 GO:GO:0050728 GO:GO:0008270
GO:GO:0003729 GO:GO:0007243 GO:GO:0017091 GO:GO:0000122
GO:GO:0010494 GO:GO:0060213 GO:GO:0000289 GO:GO:0045638
GO:GO:0070935 GeneTree:ENSGT00530000063262 GO:GO:0032680
GO:GO:0050779 HOVERGEN:HBG008483 IPI:IPI00698292 UniGene:Bt.3863
OMA:RRLPIFN EMBL:DAAA02047057 EMBL:DAAA02047055 EMBL:DAAA02047056
EMBL:BC120043 SMR:Q0VCR3 Ensembl:ENSBTAT00000066266 Uniprot:Q0VCR3
Length = 325
Score = 93 (37.8 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 87 TNIFFKTRLCAKFKH-GACRNGENCNFAHGMEDLRQ 121
T+ +KT LC F G CR G C FAHG+ +LRQ
Sbjct: 98 TSSRYKTELCRTFSESGRCRYGAKCQFAHGLGELRQ 133
Score = 91 (37.1 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 153 HKMKLCKKFYNGEECPYGDRCNFLHEDPAK 182
+K +LC KFY CPYG RC+F+H +P++
Sbjct: 140 YKTELCHKFYLQGRCPYGSRCHFIH-NPSE 168
>UNIPROTKB|D0VE66 [details] [associations]
symbol:LOC100623625 "Tristetraprolin" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0008270
GO:GO:0003676 eggNOG:COG5063 GeneTree:ENSGT00530000063262 CTD:7538
KO:K15308 OMA:RRLPIFN OrthoDB:EOG4S4PH4 EMBL:FP102918 EMBL:FP236263
EMBL:GU066778 EMBL:HM484335 EMBL:HM480487 RefSeq:NP_001161891.1
RefSeq:XP_003355955.1 UniGene:Ssc.28024 STRING:D0VE66
Ensembl:ENSSSCT00000011714 Ensembl:ENSSSCT00000026750
GeneID:100316849 GeneID:100623625 KEGG:ssc:100316849
KEGG:ssc:100623625 Uniprot:D0VE66
Length = 326
Score = 93 (37.8 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 87 TNIFFKTRLCAKFKH-GACRNGENCNFAHGMEDLRQ 121
T+ +KT LC F G CR G C FAHG+ +LRQ
Sbjct: 99 TSSRYKTELCRTFSESGRCRYGAKCQFAHGLGELRQ 134
Score = 91 (37.1 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 153 HKMKLCKKFYNGEECPYGDRCNFLHEDPAK 182
+K +LC KFY CPYG RC+F+H +P++
Sbjct: 141 YKTELCHKFYLQGRCPYGSRCHFIH-NPSE 169
>RGD|620722 [details] [associations]
symbol:Zfp36 "zinc finger protein 36" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA;ISO] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=ISO] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003729 "mRNA binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=IEA;ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS;IDA] [GO:0005829 "cytosol" evidence=IEA;ISO]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0006402 "mRNA catabolic process"
evidence=ISO;ISS] [GO:0006950 "response to stress"
evidence=IEA;ISO;ISS] [GO:0007243 "intracellular protein kinase
cascade" evidence=IEA;ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
evidence=IEA;ISO;ISS] [GO:0017091 "AU-rich element binding"
evidence=ISO;ISS] [GO:0019901 "protein kinase binding"
evidence=IEA;ISO] [GO:0019957 "C-C chemokine binding"
evidence=IEA;ISO] [GO:0032680 "regulation of tumor necrosis factor
production" evidence=IEA;ISO;ISS] [GO:0035925 "mRNA 3'-UTR AU-rich
region binding" evidence=IEA;ISO] [GO:0043488 "regulation of mRNA
stability" evidence=ISO] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=IEA;ISO] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0050728 "negative regulation of inflammatory response"
evidence=IEA;ISO] [GO:0050779 "RNA destabilization"
evidence=IEA;ISO] [GO:0060213 "positive regulation of
nuclear-transcribed mRNA poly(A) tail shortening"
evidence=IEA;ISO;ISS] [GO:0070935 "3'-UTR-mediated mRNA
stabilization" evidence=IEA;ISO;ISS] [GO:0071889 "14-3-3 protein
binding" evidence=IEA;ISO;ISS] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 RGD:620722 GO:GO:0005829
GO:GO:0005634 GO:GO:0045893 GO:GO:0006950 GO:GO:0046872
GO:GO:0003677 GO:GO:0050728 GO:GO:0008270 GO:GO:0003729
GO:GO:0007243 GO:GO:0017091 GO:GO:0000122 GO:GO:0006402
GO:GO:0071889 GO:GO:0010494 GO:GO:0060213 eggNOG:COG5063
GO:GO:0000289 GO:GO:0045638 GO:GO:0070935 GO:GO:0032680
GO:GO:0050779 HOGENOM:HOG000233479 HOVERGEN:HBG008483 CTD:7538
KO:K15308 OMA:RRLPIFN OrthoDB:EOG4S4PH4 EMBL:X63369 EMBL:AB025017
EMBL:BC060308 IPI:IPI00192126 PIR:JC1255 RefSeq:NP_579824.2
UniGene:Rn.82737 ProteinModelPortal:P47973 SMR:P47973 STRING:P47973
PhosphoSite:P47973 PRIDE:P47973 GeneID:79426 KEGG:rno:79426
UCSC:RGD:620722 InParanoid:P47973 NextBio:614778
Genevestigator:P47973 GermOnline:ENSRNOG00000019673 Uniprot:P47973
Length = 320
Score = 96 (38.9 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 227 PVYWKTKLCIK-WTQGQCPFGEKCHFAHGQSELQVIGGR 264
P Y KT+LC K + QG+CP+G +CHF H +E + G+
Sbjct: 133 PKY-KTELCHKFYLQGRCPYGSRCHFIHNPTEDLALPGQ 170
Score = 90 (36.7 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 14/25 (56%), Positives = 18/25 (72%)
Query: 153 HKMKLCKKFYNGEECPYGDRCNFLH 177
+K +LC KFY CPYG RC+F+H
Sbjct: 135 YKTELCHKFYLQGRCPYGSRCHFIH 159
Score = 86 (35.3 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 17/36 (47%), Positives = 21/36 (58%)
Query: 87 TNIFFKTRLCAKFKH-GACRNGENCNFAHGMEDLRQ 121
T+ +KT LC + G CR G C FAHG +LRQ
Sbjct: 93 TSSRYKTELCRTYSESGRCRYGAKCQFAHGPGELRQ 128
Score = 65 (27.9 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 153 HKMKLCKKFYNGEECPYGDRCNFLHEDPAKFR 184
+K +LC+ + C YG +C F H P + R
Sbjct: 97 YKTELCRTYSESGRCRYGAKCQFAH-GPGELR 127
>UNIPROTKB|P47973 [details] [associations]
symbol:Zfp36 "Tristetraprolin" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0007243 "intracellular
protein kinase cascade" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0019957 "C-C chemokine binding" evidence=IEA]
[GO:0035925 "mRNA 3'-UTR AU-rich region binding" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0050728 "negative regulation of inflammatory
response" evidence=IEA] [GO:0050779 "RNA destabilization"
evidence=IEA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 RGD:620722 GO:GO:0005829 GO:GO:0005634 GO:GO:0045893
GO:GO:0006950 GO:GO:0046872 GO:GO:0003677 GO:GO:0050728
GO:GO:0008270 GO:GO:0003729 GO:GO:0007243 GO:GO:0017091
GO:GO:0000122 GO:GO:0006402 GO:GO:0071889 GO:GO:0010494
GO:GO:0060213 eggNOG:COG5063 GO:GO:0000289 GO:GO:0045638
GO:GO:0070935 GO:GO:0032680 GO:GO:0050779 HOGENOM:HOG000233479
HOVERGEN:HBG008483 CTD:7538 KO:K15308 OMA:RRLPIFN OrthoDB:EOG4S4PH4
EMBL:X63369 EMBL:AB025017 EMBL:BC060308 IPI:IPI00192126 PIR:JC1255
RefSeq:NP_579824.2 UniGene:Rn.82737 ProteinModelPortal:P47973
SMR:P47973 STRING:P47973 PhosphoSite:P47973 PRIDE:P47973
GeneID:79426 KEGG:rno:79426 UCSC:RGD:620722 InParanoid:P47973
NextBio:614778 Genevestigator:P47973 GermOnline:ENSRNOG00000019673
Uniprot:P47973
Length = 320
Score = 96 (38.9 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 227 PVYWKTKLCIK-WTQGQCPFGEKCHFAHGQSELQVIGGR 264
P Y KT+LC K + QG+CP+G +CHF H +E + G+
Sbjct: 133 PKY-KTELCHKFYLQGRCPYGSRCHFIHNPTEDLALPGQ 170
Score = 90 (36.7 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 14/25 (56%), Positives = 18/25 (72%)
Query: 153 HKMKLCKKFYNGEECPYGDRCNFLH 177
+K +LC KFY CPYG RC+F+H
Sbjct: 135 YKTELCHKFYLQGRCPYGSRCHFIH 159
Score = 86 (35.3 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 17/36 (47%), Positives = 21/36 (58%)
Query: 87 TNIFFKTRLCAKFKH-GACRNGENCNFAHGMEDLRQ 121
T+ +KT LC + G CR G C FAHG +LRQ
Sbjct: 93 TSSRYKTELCRTYSESGRCRYGAKCQFAHGPGELRQ 128
Score = 65 (27.9 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 153 HKMKLCKKFYNGEECPYGDRCNFLHEDPAKFR 184
+K +LC+ + C YG +C F H P + R
Sbjct: 97 YKTELCRTYSESGRCRYGAKCQFAH-GPGELR 127
>WB|WBGene00003228 [details] [associations]
symbol:mex-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0001708 "cell fate specification" evidence=IMP]
[GO:0030010 "establishment of cell polarity" evidence=IMP]
[GO:0001704 "formation of primary germ layer" evidence=IMP]
[GO:0009880 "embryonic pattern specification" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] [GO:0003674 "molecular_function" evidence=NAS]
[GO:0003723 "RNA binding" evidence=ISS] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0001708
GO:GO:0009792 GO:GO:0002009 GO:GO:0008270 GO:GO:0000003
GO:GO:0003723 GO:GO:0009880 GO:GO:0030010 EMBL:AL023828 HSSP:P22893
GO:GO:0043186 GeneTree:ENSGT00530000063262 GO:GO:0001704 CTD:174836
EMBL:U81043 EMBL:Z66516 PIR:T26124 RefSeq:NP_001254325.1
UniGene:Cel.7263 ProteinModelPortal:G5ECB9 SMR:G5ECB9 IntAct:G5ECB9
EnsemblMetazoa:W03C9.7a.1 EnsemblMetazoa:W03C9.7a.2
EnsemblMetazoa:W03C9.7a.3 GeneID:174836 KEGG:cel:CELE_W03C9.7
WormBase:W03C9.7a OMA:HVERNQT NextBio:885712 Uniprot:G5ECB9
Length = 494
Score = 97 (39.2 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 19/33 (57%), Positives = 21/33 (63%)
Query: 91 FKTRLCAKFKH-GACRNGENCNFAHGMEDLRQP 122
FKT LC FK G+C GE C FAHG +LR P
Sbjct: 139 FKTALCDAFKRSGSCPYGEACRFAHGENELRMP 171
Score = 90 (36.7 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 14/26 (53%), Positives = 19/26 (73%)
Query: 153 HKMKLCKKFYNGEECPYGDRCNFLHE 178
+K +LC KF N +CPYG RC F+H+
Sbjct: 182 YKTQLCDKFSNFGQCPYGPRCQFIHK 207
Score = 81 (33.6 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 15/28 (53%), Positives = 20/28 (71%)
Query: 227 PVYWKTKLCIKWTQ-GQCPFGEKCHFAH 253
P Y KT+LC K++ GQCP+G +C F H
Sbjct: 180 PKY-KTQLCDKFSNFGQCPYGPRCQFIH 206
>UNIPROTKB|G3V2P5 [details] [associations]
symbol:ZFP36L1 "Zinc finger protein 36, C3H1 type-like 1"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 HGNC:HGNC:1107 ChiTaRS:ZFP36L1
InterPro:IPR007635 Pfam:PF04553 EMBL:AL132986
ProteinModelPortal:G3V2P5 SMR:G3V2P5 Ensembl:ENST00000557086
ArrayExpress:G3V2P5 Bgee:G3V2P5 Uniprot:G3V2P5
Length = 207
Score = 95 (38.5 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 91 FKTRLCAKFK-HGACRNGENCNFAHGMEDLR 120
+KT LC F+ +GAC+ G+ C FAHG+ +LR
Sbjct: 121 YKTELCRPFEENGACKYGDKCQFAHGIHELR 151
Score = 79 (32.9 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 153 HKMKLCKKFYNGEECPYGDRCNFLH 177
+K +LC+ F+ CPYG RC+F+H
Sbjct: 159 YKTELCRTFHTIGFCPYGPRCHFIH 183
>UNIPROTKB|A4IIN5 [details] [associations]
symbol:zfp36l2 "Zinc finger protein 36, C3H1 type-like 2"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0043488
"regulation of mRNA stability" evidence=ISS] [GO:0048793
"pronephros development" evidence=ISS] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0003723 GO:GO:0043488 GO:GO:0000288 eggNOG:COG5063
GO:GO:0048793 HOGENOM:HOG000233479 HOVERGEN:HBG008483
InterPro:IPR007635 Pfam:PF04553 CTD:678 EMBL:BC136091
RefSeq:NP_001096423.1 UniGene:Str.6563 STRING:A4IIN5
GeneID:100125029 KEGG:xtr:100125029 Xenbase:XB-GENE-971012
Uniprot:A4IIN5
Length = 333
Score = 106 (42.4 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 32/119 (26%), Positives = 48/119 (40%)
Query: 3 FPNSSSPFLAQELQSYSAGSDAIGVWPQFSMSDEQQYDRLSQYDQQPPFKRPRNYEDNES 62
FP A LQ+ S ++ P + E + +++ F R R++ +N
Sbjct: 19 FPGFLRRHSASNLQALSGNTNPAKFCPNNNQLKEPAAGSTALLNRENKF-RDRSFSENGE 77
Query: 63 NSATYXXXXXXXXXXXXXXINKGITNIFFKTRLCAKFKH-GACRNGENCNFAHGMEDLR 120
S +N T +KT LC F+ GAC+ GE C FAHG +LR
Sbjct: 78 RSQHLLHLQQQQQQKAGAQVNS--TR--YKTELCRPFEESGACKYGEKCQFAHGFHELR 132
Score = 73 (30.8 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 153 HKMKLCKKFYNGEECPYGDRCNFLH 177
+K +LC+ F+ CPYG RC+ +H
Sbjct: 140 YKTELCRTFHTIGFCPYGPRCHLIH 164
>UNIPROTKB|J9NTC7 [details] [associations]
symbol:ZFP36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0008270
GO:GO:0003676 GeneTree:ENSGT00530000063262 EMBL:AAEX03000957
Ensembl:ENSCAFT00000042970 Uniprot:J9NTC7
Length = 294
Score = 93 (37.8 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 87 TNIFFKTRLCAKFKH-GACRNGENCNFAHGMEDLRQ 121
T+ +KT LC F G CR G C FAHG+ +LRQ
Sbjct: 103 TSSRYKTELCRTFSESGRCRYGAKCQFAHGLGELRQ 138
Score = 84 (34.6 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 16/30 (53%), Positives = 20/30 (66%)
Query: 153 HKMKLCKKFYNGEECPYGDRCNFLHEDPAK 182
+K K+C KFY CPYG RC+F+ PAK
Sbjct: 145 YKTKVCHKFYLQGGCPYGSRCHFI-PFPAK 173
>ZFIN|ZDB-GENE-020213-1 [details] [associations]
symbol:mkrn1 "makorin, ring finger protein, 1"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000571
PROSITE:PS50089 PROSITE:PS50103 SMART:SM00184 SMART:SM00356
UniPathway:UPA00143 Prosite:PS00518 ZFIN:ZDB-GENE-020213-1
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0003676
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5084
InterPro:IPR017907 HSSP:P47974 InterPro:IPR026290 PANTHER:PTHR11224
HOGENOM:HOG000252976 KO:K15687 EMBL:CR792454 EMBL:CT826375
EMBL:BC095243 EMBL:AF277173 IPI:IPI00639757 RefSeq:NP_694510.1
UniGene:Dr.78561 ProteinModelPortal:Q4VBT5 STRING:Q4VBT5
Ensembl:ENSDART00000061070 GeneID:170782 KEGG:dre:170782 CTD:23608
GeneTree:ENSGT00390000014093 HOVERGEN:HBG066965 InParanoid:Q4VBT5
OMA:YQRGCCA OrthoDB:EOG45DWPM NextBio:20797100 Bgee:Q4VBT5
Uniprot:Q4VBT5
Length = 439
Score = 84 (34.6 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 23/72 (31%), Positives = 33/72 (45%)
Query: 157 LCKKFYNGEECPYGDRCNFLHEDPAKFRDDSGRYRES---SAISIGTTGPPVVTGSCSNQ 213
+CK F G C +GDRC + H P+K +D+ + S +A + T PV G
Sbjct: 52 ICKFFQKGC-CAFGDRCRYEHTKPSK-QDEVPSSKPSMPLTAAPLAGTPEPVSDGPGGTT 109
Query: 214 AEGNRPVGSNCV 225
+P GS V
Sbjct: 110 GAQEKPQGSGAV 121
Score = 80 (33.2 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 96 CAKFKHGACRNGENCNFAHGMEDLRQ 121
C F HG C+ GENC ++H + +Q
Sbjct: 24 CRYFMHGLCKEGENCRYSHDLSSCKQ 49
Score = 54 (24.1 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 232 TKLCIKWTQGQ--CPFGEKCHFAH 253
TK C + +G+ CPFG C + H
Sbjct: 322 TKPCRYFDEGRGTCPFGANCFYKH 345
Score = 52 (23.4 bits), Expect = 4.5e-06, Sum P(3) = 4.5e-06
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 231 KTKLCIKWTQGQCPFGEKCHFAHG 254
K +LC G+C +G C + HG
Sbjct: 165 KKQLCPYAAVGECRYGLNCAYLHG 188
>ZFIN|ZDB-GENE-030131-2391 [details] [associations]
symbol:zfp36l1b "zinc finger protein 36, C3H
type-like 1b" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
ZFIN:ZDB-GENE-030131-2391 GO:GO:0008270 GO:GO:0003676
GeneTree:ENSGT00530000063262 HOGENOM:HOG000233479
HOVERGEN:HBG008483 InterPro:IPR007635 Pfam:PF04553 EMBL:BX649319
EMBL:BC063991 IPI:IPI00481341 RefSeq:NP_955943.1 UniGene:Dr.78307
SMR:Q6P3H0 Ensembl:ENSDART00000014168 GeneID:323671 KEGG:dre:323671
CTD:323671 InParanoid:Q6P3H0 OMA:SSITCIS NextBio:20808378
Uniprot:Q6P3H0
Length = 348
Score = 96 (38.9 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 83 NKGITNIFFKTRLCAKFK-HGACRNGENCNFAHGMEDLR 120
N + + +KT LC F+ +G C+ G+ C FAHGM +LR
Sbjct: 130 NGQVNSSRYKTELCRPFEENGTCKYGDKCQFAHGMHELR 168
Score = 81 (33.6 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 12/25 (48%), Positives = 19/25 (76%)
Query: 153 HKMKLCKKFYNGEECPYGDRCNFLH 177
+K +LC+ F++ CPYG RC+F+H
Sbjct: 176 YKTELCRTFHSIGYCPYGPRCHFIH 200
>UNIPROTKB|C9IZP5 [details] [associations]
symbol:MKRN1 "E3 ubiquitin-protein ligase makorin-1"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 InterPro:IPR026290 PANTHER:PTHR11224
EMBL:AC069335 HGNC:HGNC:7112 IPI:IPI00947058
ProteinModelPortal:C9IZP5 SMR:C9IZP5 STRING:C9IZP5
Ensembl:ENST00000473444 HOGENOM:HOG000213911 ArrayExpress:C9IZP5
Bgee:C9IZP5 Uniprot:C9IZP5
Length = 102
Score = 73 (30.8 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 86 ITNIFFKTRL-CAKFKHGACRNGENCNFAHGMED 118
+ +F + +L F HG C+ G+NC ++H + D
Sbjct: 1 MAQVFTEGKLNLGYFMHGVCKEGDNCRYSHDLSD 34
Score = 70 (29.7 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 13/26 (50%), Positives = 15/26 (57%)
Query: 157 LCKKFYNGEECPYGDRCNFLHEDPAK 182
+CK F G C YGDRC + H P K
Sbjct: 40 VCKYFQRGY-CIYGDRCRYEHSKPLK 64
Score = 51 (23.0 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 234 LCIKWTQGQCPFGEKCHFAHGQSELQVIGGRTE 266
+C + +G C +G++C + H + Q TE
Sbjct: 40 VCKYFQRGYCIYGDRCRYEHSKPLKQEEATATE 72
>ZFIN|ZDB-GENE-990806-20 [details] [associations]
symbol:cth1 "cth1" species:7955 "Danio rerio"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 ZFIN:ZDB-GENE-990806-20 GO:GO:0008270
GO:GO:0003676 HSSP:P22893 GeneTree:ENSGT00530000063262
EMBL:AL954709 EMBL:BC107984 EMBL:AJ249490 IPI:IPI00509714
RefSeq:NP_571014.1 UniGene:Dr.621 SMR:Q9PU62 STRING:Q9PU62
Ensembl:ENSDART00000101601 GeneID:30114 KEGG:dre:30114 CTD:30114
HOGENOM:HOG000153347 HOVERGEN:HBG078993 InParanoid:Q9PU62 KO:K13056
OMA:FTFSSQH NextBio:20806593 Uniprot:Q9PU62
Length = 319
Score = 133 (51.9 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 61/226 (26%), Positives = 92/226 (40%)
Query: 91 FKTRLCAKFKH-GACRNGENCNFAHGMEDLRQPP--PNWQ-EL-----VGGGRAEEDRSS 141
+KT LC+++ G C+ E C FAHG+ DL P P ++ EL G R
Sbjct: 60 YKTELCSRYAETGTCKYAERCQFAHGLHDLHVPSRHPKYKTELCRTYHTAGYCVYGTRCL 119
Query: 142 GGNWDDDQKIIHKMKL---CKKFYNGEECPYGDRCNFLHEDPAKFRDDSGRYRESSAISI 198
+ +Q+ I + C+ F CP+G+RC+FLH + D G E
Sbjct: 120 FVHNLKEQRPIRPRRRNVPCRTFRAFGVCPFGNRCHFLHVEGGSESD--GAEEEQ----- 172
Query: 199 GTTGPPVVTGSCSNQAEGNRPVGSNCVKPVYWKTKLCIKWTQGQCPFGEKCHFAHGQSEL 258
T PP +Q++ +P G+ C +T G C +G +C F HG
Sbjct: 173 -TWQPP-------SQSQEWKPRGALC------RTFSAF----GFCLYGTRCRFQHGLPN- 213
Query: 259 QVIGGRTEGEAGNPSFISVKPQLVPAND---------SSPTAVLPT 295
I G P ++ + P +D SSPT+ LP+
Sbjct: 214 -TIKGHNANHTSWPQQMTNGGSISPISDTCTSPSPPSSSPTSALPS 258
>ZFIN|ZDB-GENE-030131-9860 [details] [associations]
symbol:zfp36l1a "zinc finger protein 36, C3H
type-like 1a" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
ZFIN:ZDB-GENE-030131-9860 GO:GO:0008270 GO:GO:0003676
eggNOG:COG5063 HOGENOM:HOG000233479 HOVERGEN:HBG008483
OrthoDB:EOG480HXD InterPro:IPR007635 Pfam:PF04553 EMBL:BC124505
IPI:IPI00482112 RefSeq:NP_001070621.1 UniGene:Dr.105582
UniGene:Dr.107563 UniGene:Dr.31482 UniGene:Dr.76498
ProteinModelPortal:Q08BY3 SMR:Q08BY3 GeneID:561280 KEGG:dre:561280
CTD:561280 InParanoid:Q08BY3 NextBio:20883849 Uniprot:Q08BY3
Length = 374
Score = 98 (39.6 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 17/39 (43%), Positives = 26/39 (66%)
Query: 83 NKGITNIFFKTRLCAKFK-HGACRNGENCNFAHGMEDLR 120
N + + +KT LC F+ +GAC+ G+ C FAHG+ +LR
Sbjct: 137 NSQVNSSRYKTELCRPFEENGACKYGDKCQFAHGIHELR 175
Score = 79 (32.9 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 153 HKMKLCKKFYNGEECPYGDRCNFLH 177
+K +LC+ F+ CPYG RC+F+H
Sbjct: 183 YKTELCRTFHTIGFCPYGPRCHFIH 207
>UNIPROTKB|Q805B4 [details] [associations]
symbol:zfp36l2-B "Zinc finger protein 36, C3H1 type-like
2-B" species:8355 "Xenopus laevis" [GO:0000288 "nuclear-transcribed
mRNA catabolic process, deadenylation-dependent decay"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0039020 "pronephric nephron tubule
development" evidence=IMP] [GO:0043488 "regulation of mRNA
stability" evidence=ISS] [GO:0048793 "pronephros development"
evidence=IMP] [GO:0072080 "nephron tubule development"
evidence=IMP] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003723 GO:GO:0043488
GO:GO:0000288 HSSP:P22893 GO:GO:0039020 HOVERGEN:HBG008483
InterPro:IPR007635 Pfam:PF04553 EMBL:AF061982 UniGene:Xl.476
EMBL:AB097482 EMBL:BC084221 RefSeq:NP_001081886.1
ProteinModelPortal:Q805B4 SMR:Q805B4 GeneID:398103 KEGG:xla:398103
CTD:398103 Xenbase:XB-GENE-971016 Uniprot:Q805B4
Length = 364
Score = 97 (39.2 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 91 FKTRLCAKFK-HGACRNGENCNFAHGMEDLR 120
+KT LC F+ +GAC+ GE C FAHG +LR
Sbjct: 134 YKTELCRPFEENGACKYGEKCQFAHGFHELR 164
Score = 79 (32.9 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 153 HKMKLCKKFYNGEECPYGDRCNFLH 177
+K +LC+ F+ CPYG RC+F+H
Sbjct: 172 YKTELCRTFHTIGFCPYGPRCHFIH 196
>UNIPROTKB|P47974 [details] [associations]
symbol:ZFP36L2 "Zinc finger protein 36, C3H1 type-like 2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0000288 "nuclear-transcribed mRNA
catabolic process, deadenylation-dependent decay" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0043488 "regulation of
mRNA stability" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] [GO:0008283 "cell proliferation"
evidence=TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 GO:GO:0005634 GO:GO:0005737
EMBL:CH471053 GO:GO:0046872 GO:GO:0003677 GO:GO:0008283
GO:GO:0008270 GO:GO:0003700 GO:GO:0003723 GO:GO:0043488
GO:GO:0000288 CleanEx:HS_BRF2 eggNOG:COG5063 HOGENOM:HOG000233479
HOVERGEN:HBG008483 OrthoDB:EOG480HXD InterPro:IPR007635
Pfam:PF04553 EMBL:U07802 EMBL:X78992 EMBL:AC010883 EMBL:BC005010
IPI:IPI00604786 PIR:S49147 RefSeq:NP_008818.3 UniGene:Hs.503093
UniGene:Hs.705738 PDB:1RGO PDBsum:1RGO ProteinModelPortal:P47974
SMR:P47974 IntAct:P47974 STRING:P47974 PhosphoSite:P47974
DMDM:146291085 PRIDE:P47974 DNASU:678 Ensembl:ENST00000282388
GeneID:678 KEGG:hsa:678 UCSC:uc002rsv.4 CTD:678
GeneCards:GC02M043449 HGNC:HGNC:1108 HPA:HPA047428 MIM:612053
neXtProt:NX_P47974 PharmGKB:PA35028 InParanoid:P47974 OMA:PLAIQTH
PhylomeDB:P47974 ChiTaRS:ZFP36L2 EvolutionaryTrace:P47974
GenomeRNAi:678 NextBio:2794 Bgee:P47974 CleanEx:HS_ZFP36L2
Genevestigator:P47974 GermOnline:ENSG00000152518 Uniprot:P47974
Length = 494
Score = 100 (40.3 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 33/119 (27%), Positives = 48/119 (40%)
Query: 4 PNSSSPFLAQELQSYSAGSDAIGVWPQF-SMSDEQQYDRLSQYDQQPPFKRPRNYEDNES 62
P S SP S GS A G + ++ + + +++ F R R++ +N
Sbjct: 71 PGSCSPKFPGAANGSSCGSAAAGGPTSYGTLKEPSGGGGTALLNKENKF-RDRSFSENGD 129
Query: 63 NSATYXXXXXXXXXXXXXXINKGITNIFFKTRLCAKFKH-GACRNGENCNFAHGMEDLR 120
S IN T +KT LC F+ G C+ GE C FAHG +LR
Sbjct: 130 RSQHLLHLQQQQKGGGGSQINS--TR--YKTELCRPFEESGTCKYGEKCQFAHGFHELR 184
Score = 79 (32.9 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 153 HKMKLCKKFYNGEECPYGDRCNFLH 177
+K +LC+ F+ CPYG RC+F+H
Sbjct: 192 YKTELCRTFHTIGFCPYGPRCHFIH 216
>UNIPROTKB|E2RKS9 [details] [associations]
symbol:ZFP36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071889 "14-3-3 protein binding"
evidence=IEA] [GO:0070935 "3'-UTR-mediated mRNA stabilization"
evidence=IEA] [GO:0060213 "positive regulation of
nuclear-transcribed mRNA poly(A) tail shortening" evidence=IEA]
[GO:0050779 "RNA destabilization" evidence=IEA] [GO:0050728
"negative regulation of inflammatory response" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035925 "mRNA 3'-UTR AU-rich region binding"
evidence=IEA] [GO:0032680 "regulation of tumor necrosis factor
production" evidence=IEA] [GO:0019957 "C-C chemokine binding"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0006950
"response to stress" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 GO:GO:0005829 GO:GO:0005634
GO:GO:0006950 GO:GO:0050728 GO:GO:0008270 GO:GO:0003729
GO:GO:0007243 GO:GO:0017091 GO:GO:0000122 GO:GO:0010494
GO:GO:0060213 GO:GO:0000289 GO:GO:0045638 GO:GO:0070935
GeneTree:ENSGT00530000063262 GO:GO:0032680 GO:GO:0050779
OMA:RRLPIFN EMBL:AAEX03000957 Ensembl:ENSCAFT00000008910
Uniprot:E2RKS9
Length = 324
Score = 93 (37.8 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 87 TNIFFKTRLCAKFKH-GACRNGENCNFAHGMEDLRQ 121
T+ +KT LC F G CR G C FAHG+ +LRQ
Sbjct: 98 TSSRYKTELCRTFSESGRCRYGAKCQFAHGLGELRQ 133
Score = 81 (33.6 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 13/24 (54%), Positives = 17/24 (70%)
Query: 153 HKMKLCKKFYNGEECPYGDRCNFL 176
+K K+C KFY CPYG RC+F+
Sbjct: 140 YKTKVCHKFYLQGGCPYGSRCHFI 163
>UNIPROTKB|Q7ZXW9 [details] [associations]
symbol:zfp36l2-A "Zinc finger protein 36, C3H1 type-like
2-A" species:8355 "Xenopus laevis" [GO:0000288 "nuclear-transcribed
mRNA catabolic process, deadenylation-dependent decay"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0043488 "regulation of mRNA
stability" evidence=ISS] [GO:0048793 "pronephros development"
evidence=ISS] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003723 GO:GO:0043488
GO:GO:0000288 HSSP:P22893 GO:GO:0048793 HOVERGEN:HBG008483
InterPro:IPR007635 Pfam:PF04553 EMBL:BC044086 EMBL:AF061982
RefSeq:NP_001080610.1 UniGene:Xl.23743 UniGene:Xl.476
ProteinModelPortal:Q7ZXW9 SMR:Q7ZXW9 GeneID:380302 KEGG:xla:380302
CTD:380302 Xenbase:XB-GENE-6256550 Uniprot:Q7ZXW9
Length = 363
Score = 96 (38.9 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 91 FKTRLCAKFKH-GACRNGENCNFAHGMEDLR 120
+KT LC F+ GAC+ GE C FAHG +LR
Sbjct: 132 YKTELCRPFEESGACKYGEKCQFAHGFHELR 162
Score = 79 (32.9 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 153 HKMKLCKKFYNGEECPYGDRCNFLH 177
+K +LC+ F+ CPYG RC+F+H
Sbjct: 170 YKTELCRTFHTIGFCPYGPRCHFIH 194
>UNIPROTKB|A7MB98 [details] [associations]
symbol:ZFP36L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043488 "regulation of mRNA stability" evidence=IEA]
[GO:0033077 "T cell differentiation in thymus" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0005634 GO:GO:0005737 GO:GO:0006417
GO:GO:0008270 GO:GO:0003676 GO:GO:0033077 GO:GO:0001570
GO:GO:0043488 GO:GO:0000288 eggNOG:COG5063
GeneTree:ENSGT00530000063262 CTD:677 HOGENOM:HOG000233479
HOVERGEN:HBG008483 OMA:HSYSFAG OrthoDB:EOG480HXD InterPro:IPR007635
Pfam:PF04553 EMBL:DAAA02029486 EMBL:BC151440 IPI:IPI00709262
RefSeq:NP_001094704.1 UniGene:Bt.61758 SMR:A7MB98 STRING:A7MB98
Ensembl:ENSBTAT00000035742 GeneID:614773 KEGG:bta:614773
InParanoid:A7MB98 NextBio:20899277 Uniprot:A7MB98
Length = 338
Score = 95 (38.5 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 91 FKTRLCAKFK-HGACRNGENCNFAHGMEDLR 120
+KT LC F+ +GAC+ G+ C FAHG+ +LR
Sbjct: 115 YKTELCRPFEENGACKYGDKCQFAHGIHELR 145
Score = 79 (32.9 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 153 HKMKLCKKFYNGEECPYGDRCNFLH 177
+K +LC+ F+ CPYG RC+F+H
Sbjct: 153 YKTELCRTFHTIGFCPYGPRCHFIH 177
>UNIPROTKB|E2R2W0 [details] [associations]
symbol:ZFP36L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0043488 "regulation of mRNA stability"
evidence=IEA] [GO:0033077 "T cell differentiation in thymus"
evidence=IEA] [GO:0006417 "regulation of translation" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0000288 "nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0005634 GO:GO:0005737 GO:GO:0006417
GO:GO:0008270 GO:GO:0003676 GO:GO:0033077 GO:GO:0001570
GO:GO:0043488 GO:GO:0000288 GeneTree:ENSGT00530000063262 CTD:677
OMA:HSYSFAG InterPro:IPR007635 Pfam:PF04553 EMBL:AAEX03005803
RefSeq:XP_853070.1 Ensembl:ENSCAFT00000026141 GeneID:490748
KEGG:cfa:490748 NextBio:20863709 Uniprot:E2R2W0
Length = 338
Score = 95 (38.5 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 91 FKTRLCAKFK-HGACRNGENCNFAHGMEDLR 120
+KT LC F+ +GAC+ G+ C FAHG+ +LR
Sbjct: 115 YKTELCRPFEENGACKYGDKCQFAHGIHELR 145
Score = 79 (32.9 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 153 HKMKLCKKFYNGEECPYGDRCNFLH 177
+K +LC+ F+ CPYG RC+F+H
Sbjct: 153 YKTELCRTFHTIGFCPYGPRCHFIH 177
>UNIPROTKB|Q07352 [details] [associations]
symbol:ZFP36L1 "Zinc finger protein 36, C3H1 type-like 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0033077 "T cell differentiation in
thymus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003729 "mRNA binding" evidence=IDA] [GO:0043488 "regulation of
mRNA stability" evidence=IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=NAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016070 "RNA metabolic process" evidence=TAS] [GO:0016071 "mRNA
metabolic process" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] Reactome:REACT_71 Reactome:REACT_21257
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0005829 GO:GO:0005634 GO:GO:0010467 GO:GO:0016071
GO:GO:0006417 PDB:1W0V PDB:1W0W PDBsum:1W0V PDBsum:1W0W
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003729
GO:GO:0003700 GO:GO:0017091 GO:GO:0033077 GO:GO:0001570
GO:GO:0043488 GO:GO:0000288 eggNOG:COG5063 CleanEx:HS_BRF1
EMBL:X79066 EMBL:X79067 EMBL:X99404 EMBL:BT019468 EMBL:BC018340
IPI:IPI00016635 PIR:S34854 RefSeq:NP_001231627.1
RefSeq:NP_001231630.1 RefSeq:NP_004917.2 UniGene:Hs.85155
ProteinModelPortal:Q07352 SMR:Q07352 IntAct:Q07352
MINT:MINT-1375566 STRING:Q07352 PhosphoSite:Q07352 DMDM:1351254
PaxDb:Q07352 PeptideAtlas:Q07352 PRIDE:Q07352 DNASU:677
Ensembl:ENST00000336440 Ensembl:ENST00000439696 GeneID:677
KEGG:hsa:677 UCSC:uc001xkh.2 CTD:677 GeneCards:GC14M069254
HGNC:HGNC:1107 HPA:HPA001301 MIM:601064 neXtProt:NX_Q07352
PharmGKB:PA35027 HOGENOM:HOG000233479 HOVERGEN:HBG008483
InParanoid:Q07352 OMA:HSYSFAG OrthoDB:EOG480HXD PhylomeDB:Q07352
ChiTaRS:ZFP36L1 EvolutionaryTrace:Q07352 GenomeRNAi:677
NextBio:2790 ArrayExpress:Q07352 Bgee:Q07352 CleanEx:HS_ZFP36L1
Genevestigator:Q07352 GermOnline:ENSG00000185650 InterPro:IPR007635
Pfam:PF04553 Uniprot:Q07352
Length = 338
Score = 95 (38.5 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 91 FKTRLCAKFK-HGACRNGENCNFAHGMEDLR 120
+KT LC F+ +GAC+ G+ C FAHG+ +LR
Sbjct: 115 YKTELCRPFEENGACKYGDKCQFAHGIHELR 145
Score = 79 (32.9 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 153 HKMKLCKKFYNGEECPYGDRCNFLH 177
+K +LC+ F+ CPYG RC+F+H
Sbjct: 153 YKTELCRTFHTIGFCPYGPRCHFIH 177
>UNIPROTKB|I3LB77 [details] [associations]
symbol:ZFP36L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043488 "regulation of mRNA stability" evidence=IEA]
[GO:0033077 "T cell differentiation in thymus" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0005634 GO:GO:0005737 GO:GO:0006417
GO:GO:0008270 GO:GO:0003676 GO:GO:0033077 GO:GO:0001570
GO:GO:0043488 GO:GO:0000288 GeneTree:ENSGT00530000063262 CTD:677
OMA:HSYSFAG InterPro:IPR007635 Pfam:PF04553 EMBL:CT956041
RefSeq:XP_003356787.1 Ensembl:ENSSSCT00000022695 GeneID:100624279
KEGG:ssc:100624279 Uniprot:I3LB77
Length = 338
Score = 95 (38.5 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 91 FKTRLCAKFK-HGACRNGENCNFAHGMEDLR 120
+KT LC F+ +GAC+ G+ C FAHG+ +LR
Sbjct: 115 YKTELCRPFEENGACKYGDKCQFAHGIHELR 145
Score = 79 (32.9 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 153 HKMKLCKKFYNGEECPYGDRCNFLH 177
+K +LC+ F+ CPYG RC+F+H
Sbjct: 153 YKTELCRTFHTIGFCPYGPRCHFIH 177
>MGI|MGI:107946 [details] [associations]
symbol:Zfp36l1 "zinc finger protein 36, C3H type-like 1"
species:10090 "Mus musculus" [GO:0000288 "nuclear-transcribed mRNA
catabolic process, deadenylation-dependent decay" evidence=IDA]
[GO:0001570 "vasculogenesis" evidence=IMP] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003729 "mRNA binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=ISO] [GO:0006402 "mRNA catabolic process"
evidence=ISO] [GO:0006417 "regulation of translation" evidence=IMP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0017091 "AU-rich
element binding" evidence=ISO] [GO:0033077 "T cell differentiation
in thymus" evidence=IGI] [GO:0043488 "regulation of mRNA stability"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
MGI:MGI:107946 GO:GO:0005829 GO:GO:0005634 GO:GO:0006417
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003729
GO:GO:0017091 GO:GO:0033077 GO:GO:0001570 GO:GO:0043488
GO:GO:0000288 eggNOG:COG5063 CTD:677 HOGENOM:HOG000233479
HOVERGEN:HBG008483 OMA:HSYSFAG OrthoDB:EOG480HXD ChiTaRS:ZFP36L1
InterPro:IPR007635 Pfam:PF04553 EMBL:M58566 IPI:IPI00138335
PIR:B39590 RefSeq:NP_031590.1 UniGene:Mm.235132
ProteinModelPortal:P23950 SMR:P23950 STRING:P23950
PhosphoSite:P23950 PRIDE:P23950 Ensembl:ENSMUST00000021552
Ensembl:ENSMUST00000165114 GeneID:12192 KEGG:mmu:12192
InParanoid:P23950 NextBio:280591 Bgee:P23950 CleanEx:MM_ZFP36L1
Genevestigator:P23950 GermOnline:ENSMUSG00000021127 Uniprot:P23950
Length = 338
Score = 95 (38.5 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 91 FKTRLCAKFK-HGACRNGENCNFAHGMEDLR 120
+KT LC F+ +GAC+ G+ C FAHG+ +LR
Sbjct: 115 YKTELCRPFEENGACKYGDKCQFAHGIHELR 145
Score = 79 (32.9 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 153 HKMKLCKKFYNGEECPYGDRCNFLH 177
+K +LC+ F+ CPYG RC+F+H
Sbjct: 153 YKTELCRTFHTIGFCPYGPRCHFIH 177
>RGD|62009 [details] [associations]
symbol:Zfp36l1 "zinc finger protein 36, C3H type-like 1"
species:10116 "Rattus norvegicus" [GO:0000288 "nuclear-transcribed
mRNA catabolic process, deadenylation-dependent decay"
evidence=IEA;ISO] [GO:0001570 "vasculogenesis" evidence=IEA;ISO]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003729 "mRNA binding" evidence=ISO;IDA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006402
"mRNA catabolic process" evidence=IDA] [GO:0006417 "regulation of
translation" evidence=IEA;ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0017091 "AU-rich element binding" evidence=IMP]
[GO:0033077 "T cell differentiation in thymus" evidence=IEA;ISO]
[GO:0043488 "regulation of mRNA stability" evidence=IEA;ISO]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
RGD:62009 GO:GO:0005829 GO:GO:0005634 GO:GO:0006417 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003729 GO:GO:0017091
GO:GO:0033077 GO:GO:0001570 GO:GO:0006402 GO:GO:0043488
GO:GO:0000288 eggNOG:COG5063 CTD:677 HOGENOM:HOG000233479
HOVERGEN:HBG008483 OrthoDB:EOG480HXD InterPro:IPR007635 Pfam:PF04553
EMBL:X52590 EMBL:X86571 IPI:IPI00188182 PIR:S10471
RefSeq:NP_058868.1 UniGene:Rn.6142 ProteinModelPortal:P17431
SMR:P17431 MINT:MINT-1210346 STRING:P17431 PhosphoSite:P17431
GeneID:29344 KEGG:rno:29344 UCSC:RGD:62009 InParanoid:P17431
NextBio:608836 ArrayExpress:P17431 Genevestigator:P17431
GermOnline:ENSRNOG00000030024 Uniprot:P17431
Length = 338
Score = 95 (38.5 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 91 FKTRLCAKFK-HGACRNGENCNFAHGMEDLR 120
+KT LC F+ +GAC+ G+ C FAHG+ +LR
Sbjct: 115 YKTELCRPFEENGACKYGDKCQFAHGIHELR 145
Score = 79 (32.9 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 153 HKMKLCKKFYNGEECPYGDRCNFLH 177
+K +LC+ F+ CPYG RC+F+H
Sbjct: 153 YKTELCRTFHTIGFCPYGPRCHFIH 177
>UNIPROTKB|P17431 [details] [associations]
symbol:Zfp36l1 "Zinc finger protein 36, C3H1 type-like 1"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 RGD:62009 GO:GO:0005829 GO:GO:0005634 GO:GO:0006417
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003729
GO:GO:0017091 GO:GO:0033077 GO:GO:0001570 GO:GO:0006402
GO:GO:0043488 GO:GO:0000288 eggNOG:COG5063 CTD:677
HOGENOM:HOG000233479 HOVERGEN:HBG008483 OrthoDB:EOG480HXD
InterPro:IPR007635 Pfam:PF04553 EMBL:X52590 EMBL:X86571
IPI:IPI00188182 PIR:S10471 RefSeq:NP_058868.1 UniGene:Rn.6142
ProteinModelPortal:P17431 SMR:P17431 MINT:MINT-1210346
STRING:P17431 PhosphoSite:P17431 GeneID:29344 KEGG:rno:29344
UCSC:RGD:62009 InParanoid:P17431 NextBio:608836 ArrayExpress:P17431
Genevestigator:P17431 GermOnline:ENSRNOG00000030024 Uniprot:P17431
Length = 338
Score = 95 (38.5 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 91 FKTRLCAKFK-HGACRNGENCNFAHGMEDLR 120
+KT LC F+ +GAC+ G+ C FAHG+ +LR
Sbjct: 115 YKTELCRPFEENGACKYGDKCQFAHGIHELR 145
Score = 79 (32.9 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 153 HKMKLCKKFYNGEECPYGDRCNFLH 177
+K +LC+ F+ CPYG RC+F+H
Sbjct: 153 YKTELCRTFHTIGFCPYGPRCHFIH 177
>TAIR|locus:2831040 [details] [associations]
symbol:AT3G08505 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50089 PROSITE:PS50103
SMART:SM00184 SMART:SM00356 UniPathway:UPA00143 Pfam:PF00097
Prosite:PS00518 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0046872 GO:GO:0003677 GO:GO:0016874 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR026290 PANTHER:PTHR11224
EMBL:AC074395 EMBL:AY070366 EMBL:BT000988 IPI:IPI00544837
RefSeq:NP_850540.1 RefSeq:NP_974255.1 UniGene:At.28383
ProteinModelPortal:Q6IDS6 SMR:Q6IDS6 PaxDb:Q6IDS6 PRIDE:Q6IDS6
EnsemblPlants:AT3G08505.1 EnsemblPlants:AT3G08505.2 GeneID:819998
KEGG:ath:AT3G08505 TAIR:At3g08505 eggNOG:NOG268458
HOGENOM:HOG000252976 InParanoid:Q6IDS6 KO:K15687 OMA:FEEGANS
PhylomeDB:Q6IDS6 ProtClustDB:CLSN2690786 Genevestigator:Q6IDS6
Uniprot:Q6IDS6
Length = 323
Score = 87 (35.7 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 16/31 (51%), Positives = 19/31 (61%)
Query: 95 LCAKFKHGACRNGENCNFAHGMEDLRQPPPN 125
LC F HG+C GENC F+H D + PP N
Sbjct: 6 LCKFFVHGSCLKGENCEFSH---DSKDPPNN 33
Score = 87 (35.7 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 28/94 (29%), Positives = 37/94 (39%)
Query: 161 FYNGEECPYGDRCNFLHEDPAKFRDDSGRYRESSAISIGTTGPPVVTGSCSNQAEGNRPV 220
FY C YG RC + H A S ES SI TT + N +G++
Sbjct: 37 FYQKRICLYGSRCRYDHVRAASNLPLSSD-SESLDRSISTTPSRHLQQQGDNN-DGDKSS 94
Query: 221 GSNCVKPVYWKTKLCIKWTQGQCPFGEKCHFAHG 254
C+ P + +C G CP G +C HG
Sbjct: 95 NVYCIHPREYP--ICSFAAAGDCPRGNQCPHMHG 126
>UNIPROTKB|F1S5I0 [details] [associations]
symbol:ZFP36L2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043488 "regulation of mRNA stability" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000288 "nuclear-transcribed mRNA catabolic
process, deadenylation-dependent decay" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0005634 GO:GO:0005737 GO:GO:0008270
GO:GO:0003676 GO:GO:0043488 GO:GO:0000288
GeneTree:ENSGT00530000063262 InterPro:IPR007635 Pfam:PF04553
OMA:PLAIQTH EMBL:CU694628 RefSeq:XP_003125238.1
Ensembl:ENSSSCT00000009263 GeneID:100513591 KEGG:ssc:100513591
ArrayExpress:F1S5I0 Uniprot:F1S5I0
Length = 493
Score = 95 (38.5 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 33/119 (27%), Positives = 47/119 (39%)
Query: 4 PNSSSPFLAQELQSYSAGSDAI-GVWPQFSMSDEQQYDRLSQYDQQPPFKRPRNYEDNES 62
P S SP S GS A G ++ + + +++ F R R++ +N
Sbjct: 71 PGSCSPKFPGAANGSSCGSAAASGPASYGTLKEPSGGGGTALLNKENKF-RDRSFSENGD 129
Query: 63 NSATYXXXXXXXXXXXXXXINKGITNIFFKTRLCAKFKH-GACRNGENCNFAHGMEDLR 120
S IN T +KT LC F+ G C+ GE C FAHG +LR
Sbjct: 130 RSQHLLHLQQQQKGGGGSQINS--TR--YKTELCRPFEESGTCKYGEKCQFAHGFHELR 184
Score = 83 (34.3 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 20/47 (42%), Positives = 26/47 (55%)
Query: 153 HKMKLCKKFYNGEECPYGDRCNFLHE-D---PAKFRDDSGRYRESSA 195
+K +LC+ F+ CPYG RC+F+H D PA SG R SA
Sbjct: 192 YKTELCRTFHTIGFCPYGPRCHFIHNADERRPAPSGGASGDLRTFSA 238
>UNIPROTKB|E2RRA5 [details] [associations]
symbol:MKRN1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000571 Pfam:PF00642 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50103 SMART:SM00184 SMART:SM00356 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR026290
PANTHER:PTHR11224 GeneTree:ENSGT00390000014093 OMA:YQRGCCA
EMBL:AAEX03010214 EMBL:AAEX03010213 Ensembl:ENSCAFT00000006351
Uniprot:E2RRA5
Length = 487
Score = 83 (34.3 bits), Expect = 6.8e-06, Sum P(3) = 6.8e-06
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 85 GITNIFFKTRLCAKFKHGACRNGENCNFAHGMED 118
G N++ + C F HG C+ G+NC ++H + D
Sbjct: 55 GDFNMWLFKKSCKYFMHGVCKEGDNCRYSHDLSD 88
Score = 70 (29.7 bits), Expect = 6.8e-06, Sum P(3) = 6.8e-06
Identities = 13/26 (50%), Positives = 15/26 (57%)
Query: 157 LCKKFYNGEECPYGDRCNFLHEDPAK 182
+CK F G C YGDRC + H P K
Sbjct: 94 VCKYFQRGY-CIYGDRCRYEHSKPLK 118
Score = 63 (27.2 bits), Expect = 6.8e-06, Sum P(3) = 6.8e-06
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 231 KTKLCIKWTQGQCPFGEKCHFAHGQS 256
K +LC G+C +GE C + HG S
Sbjct: 215 KKQLCPYAAVGECRYGENCVYLHGDS 240
Score = 51 (23.0 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 240 QGQCPFGEKCHFAH 253
+G CPFG C + H
Sbjct: 382 RGSCPFGGNCFYKH 395
>UNIPROTKB|F1MV20 [details] [associations]
symbol:F1MV20 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043488 "regulation of mRNA stability" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000288 "nuclear-transcribed mRNA catabolic
process, deadenylation-dependent decay" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0005634 GO:GO:0005737 GO:GO:0008270
GO:GO:0003676 GO:GO:0043488 GO:GO:0000288
GeneTree:ENSGT00530000063262 InterPro:IPR007635 Pfam:PF04553
OMA:PLAIQTH EMBL:DAAA02030674 IPI:IPI00695139
Ensembl:ENSBTAT00000004621 Uniprot:F1MV20
Length = 438
Score = 93 (37.8 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 86 ITNIFFKTRLCAKFKH-GACRNGENCNFAHGMEDLR 120
I + +KT LC F+ G C+ GE C FAHG +LR
Sbjct: 145 INSTRYKTELCRPFEESGTCKYGEKCQFAHGFHELR 180
Score = 83 (34.3 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 20/47 (42%), Positives = 26/47 (55%)
Query: 153 HKMKLCKKFYNGEECPYGDRCNFLHE-D---PAKFRDDSGRYRESSA 195
+K +LC+ F+ CPYG RC+F+H D PA SG R SA
Sbjct: 188 YKTELCRTFHTIGFCPYGPRCHFIHNADERRPAPSGGASGDLRTFSA 234
>UNIPROTKB|J9NWC9 [details] [associations]
symbol:ZFP36L2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 GeneTree:ENSGT00530000063262
InterPro:IPR007635 Pfam:PF04553 OMA:PLAIQTH EMBL:AAEX03007468
RefSeq:XP_003639394.1 Ensembl:ENSCAFT00000048010 GeneID:100856710
KEGG:cfa:100856710 Uniprot:J9NWC9
Length = 491
Score = 93 (37.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 86 ITNIFFKTRLCAKFKH-GACRNGENCNFAHGMEDLR 120
I + +KT LC F+ G C+ GE C FAHG +LR
Sbjct: 153 INSTRYKTELCRPFEESGTCKYGEKCQFAHGFHELR 188
Score = 83 (34.3 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 20/47 (42%), Positives = 26/47 (55%)
Query: 153 HKMKLCKKFYNGEECPYGDRCNFLHE-D---PAKFRDDSGRYRESSA 195
+K +LC+ F+ CPYG RC+F+H D PA SG R SA
Sbjct: 196 YKTELCRTFHTIGFCPYGPRCHFIHNADERRPAPSGGASGDLRAFSA 242
>MGI|MGI:107945 [details] [associations]
symbol:Zfp36l2 "zinc finger protein 36, C3H type-like 2"
species:10090 "Mus musculus" [GO:0000288 "nuclear-transcribed mRNA
catabolic process, deadenylation-dependent decay" evidence=IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0033077 "T cell differentiation in thymus" evidence=IGI]
[GO:0043488 "regulation of mRNA stability" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 MGI:MGI:107945
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003723 GO:GO:0033077 GO:GO:0043488
GO:GO:0000288 eggNOG:COG5063 HOVERGEN:HBG008483 OrthoDB:EOG480HXD
InterPro:IPR007635 Pfam:PF04553 ChiTaRS:ZFP36L2 EMBL:M58564
EMBL:M97165 IPI:IPI00138319 PIR:C39590 UniGene:Mm.259321
ProteinModelPortal:P23949 SMR:P23949 STRING:P23949
PhosphoSite:P23949 PaxDb:P23949 PRIDE:P23949 InParanoid:P23949
CleanEx:MM_ZFP36L2 Genevestigator:P23949
GermOnline:ENSMUSG00000045817 Uniprot:P23949
Length = 367
Score = 93 (37.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 86 ITNIFFKTRLCAKFKH-GACRNGENCNFAHGMEDLR 120
I + +KT LC F+ G C+ GE C FAHG +LR
Sbjct: 122 INSTRYKTELCRPFEESGTCKYGEKCQFAHGFHELR 157
Score = 79 (32.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 153 HKMKLCKKFYNGEECPYGDRCNFLH 177
+K +LC+ F+ CPYG RC+F+H
Sbjct: 165 YKTELCRTFHTIGFCPYGPRCHFIH 189
>TAIR|locus:2033384 [details] [associations]
symbol:AT1G66810 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 EMBL:AC013288 IPI:IPI00526106 RefSeq:NP_176853.1
UniGene:At.70746 HSSP:P22893 ProteinModelPortal:Q9C9N3 SMR:Q9C9N3
PaxDb:Q9C9N3 PRIDE:Q9C9N3 EnsemblPlants:AT1G66810.1 GeneID:842999
KEGG:ath:AT1G66810 TAIR:At1g66810 eggNOG:COG5063
HOGENOM:HOG000238120 InParanoid:Q9C9N3 OMA:ELNEHYE PhylomeDB:Q9C9N3
ProtClustDB:CLSN2681801 Genevestigator:Q9C9N3 Uniprot:Q9C9N3
Length = 310
Score = 94 (38.1 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 92 KTRLCAKFKH-GACRNGENCNFAHGMEDLR 120
KT LC K++ GAC G+NC FAHG+++LR
Sbjct: 234 KTELCNKWQETGACCYGDNCQFAHGIDELR 263
Score = 75 (31.5 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 153 HKMKLCKKFYNGEECPYGDRCNFLH 177
+K ++C+ G CPYG RC+F H
Sbjct: 271 YKTEVCRMMVTGAMCPYGHRCHFRH 295
>RGD|1308913 [details] [associations]
symbol:Zfp36l2 "zinc finger protein 36, C3H type-like 2"
species:10116 "Rattus norvegicus" [GO:0000288 "nuclear-transcribed
mRNA catabolic process, deadenylation-dependent decay"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0033077 "T cell differentiation in thymus" evidence=ISO]
[GO:0043488 "regulation of mRNA stability" evidence=ISO]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
RGD:1308913 GO:GO:0008270 GO:GO:0003676
GeneTree:ENSGT00530000063262 OrthoDB:EOG480HXD InterPro:IPR007635
Pfam:PF04553 CTD:678 OMA:PLAIQTH IPI:IPI00553840
RefSeq:NP_001031703.1 Ensembl:ENSRNOT00000006725 GeneID:298765
KEGG:rno:298765 UCSC:RGD:1308913 Uniprot:D3ZHK9
Length = 482
Score = 93 (37.8 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 86 ITNIFFKTRLCAKFKH-GACRNGENCNFAHGMEDLR 120
I + +KT LC F+ G C+ GE C FAHG +LR
Sbjct: 147 INSTRYKTELCRPFEESGTCKYGEKCQFAHGFHELR 182
Score = 79 (32.9 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 153 HKMKLCKKFYNGEECPYGDRCNFLH 177
+K +LC+ F+ CPYG RC+F+H
Sbjct: 190 YKTELCRTFHTIGFCPYGPRCHFIH 214
Score = 39 (18.8 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 14/46 (30%), Positives = 20/46 (43%)
Query: 190 YRESSAISIGTTGPPVVT---GSCSNQAEGNRPVGSNCVKPVYWKT 232
Y A + T G P T SC+N A P S+ + P+ +T
Sbjct: 333 YGPGGAEDLLTPGAPCATCSTTSCANNAFTFGPEVSSLITPLAIQT 378
>ZFIN|ZDB-GENE-030131-5873 [details] [associations]
symbol:zfp36l2 "zinc finger protein 36, C3H
type-like 2" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
ZFIN:ZDB-GENE-030131-5873 GO:GO:0008270 GO:GO:0003676
GeneTree:ENSGT00530000063262 InterPro:IPR007635 Pfam:PF04553
EMBL:CR932077 IPI:IPI00508201 Ensembl:ENSDART00000142674
ArrayExpress:F1QU82 Bgee:F1QU82 Uniprot:F1QU82
Length = 373
Score = 94 (38.1 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 86 ITNIFFKTRLCAKFK-HGACRNGENCNFAHGMEDLR 120
I + +KT LC F+ +G+C+ GE C FAHG +LR
Sbjct: 113 INSTRYKTELCRPFEENGSCKYGEKCQFAHGYHELR 148
Score = 76 (31.8 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 227 PVYWKTKLCIKW-TQGQCPFGEKCHFAHGQSELQVIGGRTE 266
P Y KT+ C + T G CP+G +CHF H E + T+
Sbjct: 154 PKY-KTEPCRTFHTIGFCPYGPRCHFIHNADERRAATNNTQ 193
Score = 75 (31.5 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 15/47 (31%), Positives = 26/47 (55%)
Query: 153 HKMKLCKKFYNGEECPYGDRCNFLHE-DPAKFRDDSGRYRESSAISI 198
+K + C+ F+ CPYG RC+F+H D + ++ + R S + I
Sbjct: 156 YKTEPCRTFHTIGFCPYGPRCHFIHNADERRAATNNTQARLSQELGI 202
>TAIR|locus:2075676 [details] [associations]
symbol:AT3G47120 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR000571
InterPro:IPR012677 Pfam:PF00076 Pfam:PF00642 PROSITE:PS50102
PROSITE:PS50103 SMART:SM00356 SMART:SM00360 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0000166 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003723 EMBL:AL133292
EMBL:BT002472 EMBL:BT010369 IPI:IPI00540994 PIR:T45648
RefSeq:NP_190296.1 UniGene:At.35841 HSSP:Q9V535
ProteinModelPortal:Q9SD61 SMR:Q9SD61 IntAct:Q9SD61 PaxDb:Q9SD61
PRIDE:Q9SD61 EnsemblPlants:AT3G47120.1 GeneID:823865
KEGG:ath:AT3G47120 TAIR:At3g47120 eggNOG:COG0724
HOGENOM:HOG000174091 InParanoid:Q9SD61 KO:K13107 OMA:GHEEDRS
PhylomeDB:Q9SD61 ProtClustDB:CLSN2915690 Genevestigator:Q9SD61
Uniprot:Q9SD61
Length = 352
Score = 126 (49.4 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 31/85 (36%), Positives = 42/85 (49%)
Query: 95 LCAKFKHGACRNGENCNFAHGMEDLRQPPPNWQELVGGGRAEEDRSSGGNWDDDQKIIHK 154
+C F+ G C G++C F+H ++ R W G EEDRSS WD D K
Sbjct: 135 VCRAFQRGECTRGDSCKFSH--DEKRAANTGW------GH-EEDRSS--KWDHD-KNREG 182
Query: 155 MKLCKKFYNGEECPYGDRCNFLHED 179
+C+ F GE C GD C F H++
Sbjct: 183 RGVCRAFQRGE-CTRGDSCKFSHDE 206
>UNIPROTKB|F1LVT2 [details] [associations]
symbol:F1LVT2 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000289 "nuclear-transcribed mRNA poly(A)
tail shortening" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0017091 "AU-rich element binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0005737 GO:GO:0008270 GO:GO:0017091 GO:GO:0000289
GeneTree:ENSGT00530000063262 IPI:IPI00362311
Ensembl:ENSRNOT00000050601 Uniprot:F1LVT2
Length = 490
Score = 90 (36.7 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 91 FKTRLCAKFK-HGACRNGENCNFAHGMEDLR 120
+KT LC F+ +G CR G C FAHG +LR
Sbjct: 142 YKTELCRPFEENGTCRYGNKCQFAHGYHELR 172
Score = 82 (33.9 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 153 HKMKLCKKFYNGEECPYGDRCNFLHEDP 180
+K + C+ F++ CPYG RC+F+H P
Sbjct: 180 YKTEPCRTFHSIGYCPYGSRCHFIHNQP 207
Score = 80 (33.2 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 18/44 (40%), Positives = 24/44 (54%)
Query: 227 PVYWKTKLCIKWTQ-GQCPFGEKCHFAHGQSE-LQVIGGRTEGE 268
P Y KT+ C + G CP+G +CHF H Q E L ++ G E
Sbjct: 178 PKY-KTEPCRTFHSIGYCPYGSRCHFIHNQPEQLPMLPGSVSEE 220
>TAIR|locus:2199352 [details] [associations]
symbol:AT1G68200 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 EMBL:AC016447 HSSP:P22893
eggNOG:COG5063 HOGENOM:HOG000238120 EMBL:DQ446410 EMBL:DQ056514
EMBL:BT026077 IPI:IPI00524596 IPI:IPI00846853 PIR:D96705
RefSeq:NP_001077792.1 RefSeq:NP_176987.1 UniGene:At.52430
ProteinModelPortal:Q9C9F5 SMR:Q9C9F5 PaxDb:Q9C9F5 PRIDE:Q9C9F5
EnsemblPlants:AT1G68200.1 GeneID:843149 KEGG:ath:AT1G68200
GeneFarm:2969 TAIR:At1g68200 InParanoid:Q9C9F5 OMA:SVMENED
PhylomeDB:Q9C9F5 ProtClustDB:CLSN2682260 Genevestigator:Q9C9F5
Uniprot:Q9C9F5
Length = 308
Score = 89 (36.4 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 83 NKGITNIFFKTRLCAKFKH-GACRNGENCNFAHGMEDLR 120
N+G+T KT LC K++ G C G++C FAHG+++LR
Sbjct: 219 NQGMT----KTELCNKWQETGTCPYGDHCQFAHGIKELR 253
Score = 77 (32.2 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 153 HKMKLCKKFYNGEECPYGDRCNFLH 177
+K ++C+ G+ CPYG RC+F H
Sbjct: 261 YKTEVCRMVLAGDNCPYGHRCHFRH 285
>WB|WBGene00004078 [details] [associations]
symbol:pos-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0008340 "determination
of adult lifespan" evidence=IMP] [GO:0001708 "cell fate
specification" evidence=IMP] [GO:0009880 "embryonic pattern
specification" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P
granule" evidence=IDA] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0008266 "poly(U) RNA binding" evidence=IDA]
[GO:0003727 "single-stranded RNA binding" evidence=IDA] [GO:0003730
"mRNA 3'-UTR binding" evidence=IDA;IPI] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0001708
GO:GO:0008340 GO:GO:0009792 GO:GO:0008266 GO:GO:0008270
GO:GO:0003730 GO:GO:0009880 GO:GO:0001106 HSSP:P22893 GO:GO:0043186
GeneTree:ENSGT00530000063262 EMBL:FO081326 EMBL:AB006208 PIR:T37246
RefSeq:NP_505172.1 UniGene:Cel.19584 ProteinModelPortal:G5EF15
SMR:G5EF15 IntAct:G5EF15 EnsemblMetazoa:F52E1.1 GeneID:179224
KEGG:cel:CELE_F52E1.1 CTD:179224 WormBase:F52E1.1 OMA:QFIHKLV
ChEMBL:CHEMBL1293304 NextBio:904448 Uniprot:G5EF15
Length = 264
Score = 92 (37.4 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 17/33 (51%), Positives = 21/33 (63%)
Query: 91 FKTRLCAKFKHG-ACRNGENCNFAHGMEDLRQP 122
FKT LC +K AC G+ C FAHG+ +LR P
Sbjct: 99 FKTALCDAYKRSQACSYGDQCRFAHGVHELRLP 131
Score = 71 (30.1 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 17/47 (36%), Positives = 24/47 (51%)
Query: 153 HKMKLCKKFYNGEECPYGDRCNFLHE--DPAKFRDDSGRYRESSAIS 197
+K LC KF C YG RC F+H+ D + SG + +S+ S
Sbjct: 142 YKTVLCDKFSMTGNCKYGTRCQFIHKIVDGNAAKLASGAHANTSSKS 188
Score = 68 (29.0 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 16/36 (44%), Positives = 20/36 (55%)
Query: 219 PVGSNCVKPVYWKTKLCIKWTQ-GQCPFGEKCHFAH 253
P G N P Y KT LC K++ G C +G +C F H
Sbjct: 134 PRGRN--HPKY-KTVLCDKFSMTGNCKYGTRCQFIH 166
>WB|WBGene00009532 [details] [associations]
symbol:ccch-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0016529 "sarcoplasmic reticulum"
evidence=IDA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0008270 GO:GO:0003676 GO:GO:0016529 HSSP:P22893
eggNOG:COG5063 GeneTree:ENSGT00530000063262 EMBL:Z74033 PIR:T21954
RefSeq:NP_505926.2 ProteinModelPortal:Q20155 SMR:Q20155
PaxDb:Q20155 EnsemblMetazoa:F38B7.1a GeneID:179584
KEGG:cel:CELE_F38B7.1 UCSC:F38B7.1a CTD:179584 WormBase:F38B7.1a
HOGENOM:HOG000022515 InParanoid:Q20155 OMA:PCSSNDS NextBio:906034
ArrayExpress:Q20155 Uniprot:Q20155
Length = 460
Score = 88 (36.0 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 153 HKMKLCKKFYNGEECPYGDRCNFLHEDP 180
+K + C+ F+ CPYG RC+F+H +P
Sbjct: 237 YKTEACQSFHQSGYCPYGPRCHFIHNEP 264
Score = 81 (33.6 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 91 FKTRLCAKFK-HGACRNGENCNFAHGMEDLRQPP 123
+KT LC + HG C GE C +AHG + R P
Sbjct: 199 YKTELCRSWMDHGRCNYGERCQYAHGELEKRPVP 232
Score = 78 (32.5 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 218 RPVGSNCVKPVYWKTKLCIKWTQ-GQCPFGEKCHFAHGQ 255
RPV + P Y KT+ C + Q G CP+G +CHF H +
Sbjct: 229 RPVPRH---PKY-KTEACQSFHQSGYCPYGPRCHFIHNE 263
>FB|FBgn0011837 [details] [associations]
symbol:Tis11 "Tis11 homolog" species:7227 "Drosophila
melanogaster" [GO:0003677 "DNA binding" evidence=NAS] [GO:0005634
"nucleus" evidence=NAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0010629 "negative regulation of gene expression" evidence=IDA]
[GO:0003730 "mRNA 3'-UTR binding" evidence=IDA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0005634
GO:GO:0016246 GO:GO:0046872 GO:GO:0003677 EMBL:AE014298
GO:GO:0008270 GO:GO:0003730 eggNOG:COG5063
GeneTree:ENSGT00530000063262 EMBL:U13397 EMBL:X81194
RefSeq:NP_511141.2 RefSeq:NP_727633.1 UniGene:Dm.4329
ProteinModelPortal:P47980 SMR:P47980 MINT:MINT-914241 STRING:P47980
PaxDb:P47980 EnsemblMetazoa:FBtr0073683 EnsemblMetazoa:FBtr0333756
GeneID:32222 KEGG:dme:Dmel_CG4070 CTD:32222 FlyBase:FBgn0011837
InParanoid:P47980 OMA:MNTSRYK OrthoDB:EOG47WM4T PhylomeDB:P47980
GenomeRNAi:32222 NextBio:777464 Bgee:P47980 Uniprot:P47980
Length = 436
Score = 90 (36.7 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 91 FKTRLCAKFKH-GACRNGENCNFAHGMEDLR 120
+KT LC F+ G C+ GE C FAHG +LR
Sbjct: 136 YKTELCRPFEEAGECKYGEKCQFAHGSHELR 166
Score = 77 (32.2 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 153 HKMKLCKKFYNGEECPYGDRCNFLHE-DPAK 182
+K + C+ F++ CPYG RC+F+H D A+
Sbjct: 174 YKTEYCRTFHSVGFCPYGPRCHFVHNADEAR 204
Score = 73 (30.8 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 227 PVYWKTKLCIKW-TQGQCPFGEKCHFAHGQSE 257
P Y KT+ C + + G CP+G +CHF H E
Sbjct: 172 PKY-KTEYCRTFHSVGFCPYGPRCHFVHNADE 202
>RGD|1559581 [details] [associations]
symbol:Zfp36l3 "zinc finger protein 36, C3H type-like 3"
species:10116 "Rattus norvegicus" [GO:0000288 "nuclear-transcribed
mRNA catabolic process, deadenylation-dependent decay"
evidence=ISO] [GO:0000289 "nuclear-transcribed mRNA poly(A) tail
shortening" evidence=ISO] [GO:0003723 "RNA binding" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0017091 "AU-rich element
binding" evidence=ISO] REFSEQ:XM_001053657 Ncbi:XP_001053657
Length = 722
Score = 90 (36.7 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 91 FKTRLCAKFK-HGACRNGENCNFAHGMEDLR 120
+KT LC F+ +G CR G C FAHG +LR
Sbjct: 122 YKTELCRPFEENGTCRYGNKCQFAHGYHELR 152
Score = 82 (33.9 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 153 HKMKLCKKFYNGEECPYGDRCNFLHEDP 180
+K + C+ F++ CPYG RC+F+H P
Sbjct: 160 YKTEPCRTFHSIGYCPYGSRCHFIHNQP 187
Score = 80 (33.2 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 18/44 (40%), Positives = 24/44 (54%)
Query: 227 PVYWKTKLCIKWTQ-GQCPFGEKCHFAHGQSE-LQVIGGRTEGE 268
P Y KT+ C + G CP+G +CHF H Q E L ++ G E
Sbjct: 158 PKY-KTEPCRTFHSIGYCPYGSRCHFIHNQPEQLPMLPGSVSEE 200
>ZFIN|ZDB-GENE-020213-2 [details] [associations]
symbol:mkrn2 "makorin, ring finger protein, 2"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=ISS] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50089 PROSITE:PS50103
SMART:SM00184 SMART:SM00356 UniPathway:UPA00143 Pfam:PF00097
Prosite:PS00518 ZFIN:ZDB-GENE-020213-2 GO:GO:0007399 GO:GO:0030154
GO:GO:0006355 GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
GO:GO:0006351 GO:GO:0003676 GO:GO:0016567 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5084
InterPro:IPR017907 InterPro:IPR026290 PANTHER:PTHR11224
HOGENOM:HOG000252976 KO:K15687 GeneTree:ENSGT00390000014093
HOVERGEN:HBG066965 EMBL:AF277172 EMBL:BC065352 IPI:IPI00493411
RefSeq:NP_694511.1 UniGene:Dr.77762 STRING:Q9DFG8
Ensembl:ENSDART00000019997 Ensembl:ENSDART00000130504 GeneID:170783
KEGG:dre:170783 CTD:23609 OrthoDB:EOG4229K2 NextBio:20797101
ArrayExpress:Q9DFG8 Bgee:Q9DFG8 InterPro:IPR026293
PANTHER:PTHR11224:SF17 Uniprot:Q9DFG8
Length = 414
Score = 76 (31.8 bits), Expect = 8.7e-05, Sum P(3) = 8.7e-05
Identities = 20/56 (35%), Positives = 26/56 (46%)
Query: 157 LCKKFYNGEECPYGDRCNFLH-EDPAKFR----DDSGRYRESSAISIGTTGPPVVT 207
+CK + G C YGDRC + H + P + D S R S+ S GPP T
Sbjct: 36 ICKYYQRGA-CAYGDRCRYDHIKPPGRGSGAPADHSNRSSSSAGASAPGPGPPANT 90
Score = 66 (28.3 bits), Expect = 8.7e-05, Sum P(3) = 8.7e-05
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 96 CAKFKHGACRNGENCNFAHGM 116
C F HG CR G C F+H +
Sbjct: 8 CRYFLHGVCREGSRCLFSHDL 28
Score = 61 (26.5 bits), Expect = 8.7e-05, Sum P(3) = 8.7e-05
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 233 KLCIKWTQGQCPFGEKCHFAHGQ 255
++C GQC +GE C + HG+
Sbjct: 168 QICPFLAAGQCQYGESCPYLHGE 190
Score = 60 (26.2 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 233 KLCIKWTQGQ--CPFGEKCHFAHGQSE 257
K C + QG+ CPFG KC + H ++
Sbjct: 324 KACKYFDQGRGTCPFGGKCFYMHAYAD 350
>WB|WBGene00003231 [details] [associations]
symbol:mex-6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0002009 "morphogenesis
of an epithelium" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0043186 "P granule" evidence=IDA] [GO:0003730
"mRNA 3'-UTR binding" evidence=IDA] [GO:0032880 "regulation of
protein localization" evidence=IGI] [GO:0019904 "protein domain
specific binding" evidence=IPI] [GO:0019901 "protein kinase
binding" evidence=IPI] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 GO:GO:0009792 GO:GO:0002009
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0010171
GO:GO:0040011 GO:GO:0032880 GO:GO:0003730 eggNOG:COG5063
GO:GO:0043186 GeneTree:ENSGT00530000063262 EMBL:Z48009
HOGENOM:HOG000113570 PIR:T18624 RefSeq:NP_496043.1
ProteinModelPortal:Q09436 SMR:Q09436 DIP:DIP-26165N IntAct:Q09436
MINT:MINT-1040479 STRING:Q09436 PaxDb:Q09436 EnsemblMetazoa:AH6.5.1
EnsemblMetazoa:AH6.5.2 GeneID:174504 KEGG:cel:CELE_AH6.5 UCSC:AH6.5
CTD:174504 WormBase:AH6.5 InParanoid:Q09436 NextBio:884312
Uniprot:Q09436
Length = 467
Score = 87 (35.7 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 16/35 (45%), Positives = 21/35 (60%)
Query: 153 HKMKLCKKFYNGEE--CPYGDRCNFLHEDPAKFRD 185
+K KLCK F G CPYG RC F+H +F++
Sbjct: 318 YKTKLCKNFARGGSGVCPYGLRCEFVHPSDTEFQN 352
Score = 79 (32.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 16/32 (50%), Positives = 19/32 (59%)
Query: 91 FKTRLCAKFKHGA--CRNGENCNFAHGMEDLR 120
FKTRLC G C G C FAHG+++LR
Sbjct: 274 FKTRLCMTHAAGINPCALGARCKFAHGLKELR 305
>SGD|S000004126 [details] [associations]
symbol:TIS11 "mRNA-binding protein expressed during iron
starvation" species:4932 "Saccharomyces cerevisiae" [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0000956 "nuclear-transcribed mRNA
catabolic process" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003729 "mRNA binding" evidence=IDA] [GO:0006879 "cellular iron
ion homeostasis" evidence=IMP] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 SGD:S000004126 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0003729
EMBL:BK006945 GO:GO:0006879 EMBL:X91258 EMBL:U53881 GO:GO:0000932
GO:GO:0000956 eggNOG:COG5063 GeneTree:ENSGT00530000063262
HOGENOM:HOG000001038 OrthoDB:EOG4W3WXK EMBL:S76619 EMBL:L42134
EMBL:Z73308 EMBL:AY558210 PIR:S59328 RefSeq:NP_013237.1
ProteinModelPortal:P47977 SMR:P47977 DIP:DIP-5614N IntAct:P47977
MINT:MINT-504800 STRING:P47977 EnsemblFungi:YLR136C GeneID:850827
KEGG:sce:YLR136C CYGD:YLR136c NextBio:967088 Genevestigator:P47977
GermOnline:YLR136C Uniprot:P47977
Length = 285
Score = 81 (33.6 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 230 WKTKLCIKWTQ-GQCPFGEKCHFAHG 254
++TK C+ W + G CP+G +C F HG
Sbjct: 208 FRTKPCVNWEKLGYCPYGRRCCFKHG 233
Score = 79 (32.9 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 91 FKTRLCAKFK-HGACRNGENCNFAHGMEDLR 120
+KT LC F G+C G C FAHG+ +L+
Sbjct: 170 YKTELCESFTLKGSCPYGSKCQFAHGLGELK 200
Score = 75 (31.5 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 150 KIIHKMKLCKKFYNGEECPYGDRCNFLH 177
K ++K +LC+ F CPYG +C F H
Sbjct: 167 KQLYKTELCESFTLKGSCPYGSKCQFAH 194
>ZFIN|ZDB-GENE-050913-48 [details] [associations]
symbol:zgc:114130 "zgc:114130" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
ZFIN:ZDB-GENE-050913-48 GO:GO:0008270 GO:GO:0003676
GeneTree:ENSGT00530000063262 EMBL:BX927244 IPI:IPI00610779
Ensembl:ENSDART00000124803 Ensembl:ENSDART00000139068
Uniprot:F1QH59
Length = 394
Score = 88 (36.0 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 17/35 (48%), Positives = 22/35 (62%)
Query: 87 TNIFFKTRLCAKF-KHGACRNGENCNFAHGMEDLR 120
T+ +KT LC F + G C+ G C FAHG E+LR
Sbjct: 137 TSSRYKTELCRTFAERGLCKYGGKCQFAHGPEELR 171
Score = 73 (30.8 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 18/59 (30%), Positives = 31/59 (52%)
Query: 153 HKMKLCKKFYNGEECPYGDRCNFLHEDPAKFRDDSGRYRESSAISIGTTGPPVVTGSCS 211
+K + C+ F++ CPYG RC+F+H DD + R ++ + PP++ S S
Sbjct: 179 YKTEPCRTFHSIGFCPYGIRCHFVHNA----EDDQAQSRPQTS-NPTVQRPPLLKQSFS 232
>CGD|CAL0004295 [details] [associations]
symbol:orf19.5334 species:5476 "Candida albicans" [GO:0003729
"mRNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006879 "cellular iron
ion homeostasis" evidence=IEA] [GO:0000956 "nuclear-transcribed
mRNA catabolic process" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 CGD:CAL0004295
GO:GO:0008270 GO:GO:0003676 EMBL:AACQ01000059 EMBL:AACQ01000058
eggNOG:COG5063 RefSeq:XP_717058.1 RefSeq:XP_717137.1
ProteinModelPortal:Q5A5R5 GeneID:3641257 GeneID:3641293
KEGG:cal:CaO19.12794 KEGG:cal:CaO19.5334 Uniprot:Q5A5R5
Length = 203
Score = 96 (38.9 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 19/45 (42%), Positives = 24/45 (53%)
Query: 86 ITNIFFKTRLCAKF-KHGACRNGENCNFAHGMEDLR--QPPPNWQ 127
I +KT LCA F K G C C FAHG +L+ + PP W+
Sbjct: 134 INTQLYKTELCASFMKTGVCPYANKCQFAHGENELKHVERPPKWR 178
Score = 53 (23.7 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 154 KMKLCKKFYNGEECPYGDRCNFLHED 179
+ K C + C YG+RC F H D
Sbjct: 178 RSKPCANWTKYGSCRYGNRCCFKHGD 203
>WB|WBGene00003230 [details] [associations]
symbol:mex-5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0005813 "centrosome" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0043186 "P granule" evidence=IDA]
[GO:0003730 "mRNA 3'-UTR binding" evidence=IDA] [GO:0008187
"poly-pyrimidine tract binding" evidence=IDA] [GO:0032880
"regulation of protein localization" evidence=IGI;IMP] [GO:0019904
"protein domain specific binding" evidence=IPI] [GO:0019901
"protein kinase binding" evidence=IPI] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0009792
GO:GO:0040007 GO:GO:0005813 GO:GO:0002119 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0032880 GO:GO:0003730
eggNOG:COG5063 GO:GO:0043186 GO:GO:0008187
GeneTree:ENSGT00530000063262 EMBL:Z82286 PIR:T26081
RefSeq:NP_502566.1 ProteinModelPortal:Q9XUB2 SMR:Q9XUB2
IntAct:Q9XUB2 STRING:Q9XUB2 PaxDb:Q9XUB2 EnsemblMetazoa:W02A2.7.1
EnsemblMetazoa:W02A2.7.2 GeneID:178296 KEGG:cel:CELE_W02A2.7
UCSC:W02A2.7 CTD:178296 WormBase:W02A2.7 HOGENOM:HOG000113570
InParanoid:Q9XUB2 OMA:RYHRVME BindingDB:Q9XUB2 ChEMBL:CHEMBL1293319
NextBio:900550 Uniprot:Q9XUB2
Length = 468
Score = 84 (34.6 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 16/35 (45%), Positives = 21/35 (60%)
Query: 153 HKMKLCKKFYNGEE--CPYGDRCNFLHEDPAKFRD 185
+K KLCK F G CPYG RC F+H +F++
Sbjct: 315 YKTKLCKNFARGGTGFCPYGLRCEFVHPTDKEFQN 349
Score = 77 (32.2 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 15/32 (46%), Positives = 19/32 (59%)
Query: 91 FKTRLCAKFKHGA--CRNGENCNFAHGMEDLR 120
+KTRLC G C G C FAHG+++LR
Sbjct: 271 YKTRLCMMHASGIKPCDMGARCKFAHGLKELR 302
>WB|WBGene00013319 [details] [associations]
symbol:ccch-5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0009792 EMBL:Z99281 GO:GO:0008270 GO:GO:0000003
GO:GO:0003676 eggNOG:COG5063 GeneTree:ENSGT00530000063262
PIR:T27239 RefSeq:NP_502805.1 ProteinModelPortal:O18251 SMR:O18251
STRING:O18251 EnsemblMetazoa:Y57G11C.25 GeneID:178412
KEGG:cel:CELE_Y57G11C.25 UCSC:Y57G11C.25 CTD:178412
WormBase:Y57G11C.25 HOGENOM:HOG000114059 InParanoid:O18251
NextBio:901036 Uniprot:O18251
Length = 199
Score = 81 (33.6 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 91 FKTRLCAKFK-HGACRNGENCNFAHGMEDLR 120
FKT LC F+ AC GE C FAH +E+L+
Sbjct: 69 FKTALCKTFQLTKACSYGEQCKFAHSVEELQ 99
Score = 67 (28.6 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 153 HKMKLCKKFYNGEECPYGDRCNFLHE--DPAKFR 184
+K LC F C YG +C F+H +PA +
Sbjct: 112 YKTVLCDNFSTTGHCKYGTKCQFIHRTVEPASLK 145
Score = 66 (28.3 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 14/28 (50%), Positives = 16/28 (57%)
Query: 227 PVYWKTKLCIKW-TQGQCPFGEKCHFAH 253
P Y KT LC + T G C +G KC F H
Sbjct: 110 PKY-KTVLCDNFSTTGHCKYGTKCQFIH 136
>WB|WBGene00007961 [details] [associations]
symbol:C35D6.4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 GO:GO:0008270 GO:GO:0003676
eggNOG:COG5063 GeneTree:ENSGT00530000063262 EMBL:Z82261 PIR:T19760
RefSeq:NP_502949.1 UniGene:Cel.13375 ProteinModelPortal:O45289
SMR:O45289 STRING:O45289 EnsemblMetazoa:C35D6.4 GeneID:183235
KEGG:cel:CELE_C35D6.4 UCSC:C35D6.4 CTD:183235 WormBase:C35D6.4
HOGENOM:HOG000114669 InParanoid:O45289 NextBio:920410
Uniprot:O45289
Length = 203
Score = 82 (33.9 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 91 FKTRLCAKFKHGA-CRNGENCNFAHGMEDLRQP 122
FKT LC + G C GE C FAH + +LR P
Sbjct: 89 FKTSLCGFHRRGQKCAYGEKCKFAHSVHELRFP 121
Score = 66 (28.3 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 13/46 (28%), Positives = 18/46 (39%)
Query: 153 HKMKLCKKFYNGEECPYGDRCNFLHEDPAKFRDDSGRYRESSAISI 198
+K LC F C YG RC F+H + E+ I +
Sbjct: 130 YKTVLCNNFSTTGHCKYGIRCQFIHRSMDSTSSNQSNETENITIDL 175
>WB|WBGene00009539 [details] [associations]
symbol:F38C2.7 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 GO:GO:0008270 GO:GO:0003676
eggNOG:COG5063 GeneTree:ENSGT00530000063262 EMBL:Z82267
HOGENOM:HOG000114669 PIR:T21963 RefSeq:NP_502930.1
UniGene:Cel.12984 ProteinModelPortal:O45493 SMR:O45493
IntAct:O45493 STRING:O45493 EnsemblMetazoa:F38C2.7 GeneID:185463
KEGG:cel:CELE_F38C2.7 UCSC:F38C2.7 CTD:185463 WormBase:F38C2.7
InParanoid:O45493 NextBio:928376 Uniprot:O45493
Length = 203
Score = 82 (33.9 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 91 FKTRLCAKFKHGA-CRNGENCNFAHGMEDLRQP 122
FKT LC + G C GE C FAH + +LR P
Sbjct: 89 FKTSLCGFHRRGQKCAYGEKCKFAHSVHELRFP 121
Score = 66 (28.3 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 13/46 (28%), Positives = 18/46 (39%)
Query: 153 HKMKLCKKFYNGEECPYGDRCNFLHEDPAKFRDDSGRYRESSAISI 198
+K LC F C YG RC F+H + E+ I +
Sbjct: 130 YKTVLCNNFSTTGHCKYGIRCQFIHRSMNSTSSNQSNKMENITIDL 175
>UNIPROTKB|J9NRX8 [details] [associations]
symbol:MKRN1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0008270
GO:GO:0003676 InterPro:IPR026290 PANTHER:PTHR11224
GeneTree:ENSGT00390000014093 EMBL:AAEX03010214 EMBL:AAEX03010213
Ensembl:ENSCAFT00000044374 Uniprot:J9NRX8
Length = 209
Score = 67 (28.6 bits), Expect = 0.00064, Sum P(3) = 0.00064
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 101 HGACRNGENCNFAHGMED 118
HG C+ G+NC ++H + D
Sbjct: 2 HGVCKEGDNCRYSHDLSD 19
Score = 63 (27.2 bits), Expect = 0.00064, Sum P(3) = 0.00064
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 231 KTKLCIKWTQGQCPFGEKCHFAHGQS 256
K +LC G+C +GE C + HG S
Sbjct: 118 KKQLCPYAAVGECRYGENCVYLHGDS 143
Score = 53 (23.7 bits), Expect = 0.00064, Sum P(3) = 0.00064
Identities = 10/18 (55%), Positives = 12/18 (66%)
Query: 157 LCKKFYNGEECPYGDRCN 174
+CK F G C YGDRC+
Sbjct: 25 VCKYFQRGY-CIYGDRCS 41
>WB|WBGene00009537 [details] [associations]
symbol:ccch-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0009792
GO:GO:0008270 GO:GO:0003676 eggNOG:COG5063
GeneTree:ENSGT00530000063262 EMBL:Z82267 HOGENOM:HOG000114059
PIR:T21961 RefSeq:NP_502931.1 ProteinModelPortal:O45491 SMR:O45491
IntAct:O45491 STRING:O45491 EnsemblMetazoa:F38C2.5 GeneID:178454
KEGG:cel:CELE_F38C2.5 UCSC:F38C2.5 CTD:178454 WormBase:F38C2.5
InParanoid:O45491 NextBio:901202 Uniprot:O45491
Length = 186
Score = 82 (33.9 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 17/36 (47%), Positives = 21/36 (58%)
Query: 91 FKTRLCAKFK-HGACRNGENCNFAHGMEDLRQPPPN 125
FKT LC F+ AC GE C FAH +E+L+ N
Sbjct: 73 FKTALCKTFQLTRACSYGEQCKFAHSVEELQLKQKN 108
Score = 64 (27.6 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 227 PVYWKTKLCIKWTQ-GQCPFGEKCHFAH 253
P Y KT LC +++ G C +G KC F H
Sbjct: 114 PKY-KTVLCDNFSRTGHCKYGTKCQFIH 140
Score = 63 (27.2 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 153 HKMKLCKKFYNGEECPYGDRCNFLH 177
+K LC F C YG +C F+H
Sbjct: 116 YKTVLCDNFSRTGHCKYGTKCQFIH 140
>UNIPROTKB|F1MF12 [details] [associations]
symbol:MKRN1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000571 Pfam:PF00642 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50103 SMART:SM00184 SMART:SM00356 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR026290
PANTHER:PTHR11224 GeneTree:ENSGT00390000014093 OMA:YQRGCCA
EMBL:DAAA02011734 EMBL:DAAA02011733 IPI:IPI00701209
Ensembl:ENSBTAT00000010932 ArrayExpress:F1MF12 Uniprot:F1MF12
Length = 480
Score = 83 (34.3 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 36/135 (26%), Positives = 58/135 (42%)
Query: 157 LCKKFYNGEECPYGDRCNFLHEDPAKFR-----DDSGRYRESSAISIGTTGPPVVT--GS 209
+CK F G C YGDRC + H P K D + + +++ S+ + GP V G
Sbjct: 89 VCKYFQRGY-CIYGDRCRYEHSKPLKQEEATATDLTAKSSLAASSSLSSVGPTVDMNMGE 147
Query: 210 CSNQAEGNRPVGSNCVKPVYWKTKLCIKWTQGQCPFGEKCHFAHGQSELQVIGGRTEGEA 269
++ VG+ W I++ GQ P+ + + ++ LQ G T+ +A
Sbjct: 148 AESRNSNFATVGAGSED---WVN--AIEFVPGQ-PYCGRTAPSSAEAPLQ--GSVTKEDA 199
Query: 270 GNP-SFISVKPQLVP 283
S + K QL P
Sbjct: 200 EKEQSAVETKKQLCP 214
Score = 76 (31.8 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 96 CAKFKHGACRNGENCNFAHGMED 118
C F HG C+ G+NC ++H + D
Sbjct: 61 CWYFMHGVCKEGDNCRYSHDLSD 83
>WB|WBGene00003388 [details] [associations]
symbol:moe-3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0048599 "oocyte development"
evidence=IMP] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0008270 GO:GO:0003676 GO:GO:0048599 HSSP:P22893
eggNOG:COG5063 GeneTree:ENSGT00530000063262 EMBL:Z81521
HOGENOM:HOG000016873 PIR:T21620 RefSeq:NP_496795.1
UniGene:Cel.15255 ProteinModelPortal:Q9XV46 SMR:Q9XV46
DIP:DIP-25142N IntAct:Q9XV46 MINT:MINT-1108588 STRING:Q9XV46
EnsemblMetazoa:F32A11.6 GeneID:174960 KEGG:cel:CELE_F32A11.6
UCSC:F32A11.6 CTD:174960 WormBase:F32A11.6 InParanoid:Q9XV46
OMA:HLAEDMA NextBio:886196 Uniprot:Q9XV46
Length = 367
Score = 82 (33.9 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 153 HKMKLCKKFYNGEECPYGDRCNFLHED 179
+K KLC K+ CPYG RC F+H D
Sbjct: 173 YKTKLCDKYTTTGLCPYGKRCLFIHPD 199
Score = 74 (31.1 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 15/31 (48%), Positives = 19/31 (61%)
Query: 91 FKTRLC-AKFKHGACRNGENCNFAHGMEDLR 120
+KT +C A + C ENC FAHG E+LR
Sbjct: 131 YKTVICQAWLESKTCTFAENCRFAHGEEELR 161
>UNIPROTKB|F1MRH0 [details] [associations]
symbol:MKRN1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50089
PROSITE:PS50103 SMART:SM00184 SMART:SM00356 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR026290 PANTHER:PTHR11224 GeneTree:ENSGT00390000014093
EMBL:DAAA02011734 EMBL:DAAA02011733 IPI:IPI00701209
Ensembl:ENSBTAT00000040303 ArrayExpress:F1MRH0 Uniprot:F1MRH0
Length = 340
Score = 83 (34.3 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 36/135 (26%), Positives = 58/135 (42%)
Query: 157 LCKKFYNGEECPYGDRCNFLHEDPAKFR-----DDSGRYRESSAISIGTTGPPVVT--GS 209
+CK F G C YGDRC + H P K D + + +++ S+ + GP V G
Sbjct: 101 VCKYFQRGY-CIYGDRCRYEHSKPLKQEEATATDLTAKSSLAASSSLSSVGPTVDMNMGE 159
Query: 210 CSNQAEGNRPVGSNCVKPVYWKTKLCIKWTQGQCPFGEKCHFAHGQSELQVIGGRTEGEA 269
++ VG+ W I++ GQ P+ + + ++ LQ G T+ +A
Sbjct: 160 AESRNSNFATVGAGSED---WVN--AIEFVPGQ-PYCGRTAPSSAEAPLQ--GSVTKEDA 211
Query: 270 GNP-SFISVKPQLVP 283
S + K QL P
Sbjct: 212 EKEQSAVETKKQLCP 226
Score = 72 (30.4 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 99 FKHGACRNGENCNFAHGMED 118
F HG C+ G+NC ++H + D
Sbjct: 76 FMHGVCKEGDNCRYSHDLSD 95
>MGI|MGI:1859353 [details] [associations]
symbol:Mkrn1 "makorin, ring finger protein, 1" species:10090
"Mus musculus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000571 Pfam:PF00642 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50103 SMART:SM00184 SMART:SM00356 UniPathway:UPA00143
MGI:MGI:1859353 Prosite:PS00518 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0003682 GO:GO:0003676 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5084
InterPro:IPR017907 InterPro:IPR026290 PANTHER:PTHR11224
GeneTree:ENSGT00390000014093 HOVERGEN:HBG066965 OrthoDB:EOG45DWPM
EMBL:AF192785 IPI:IPI00459256 IPI:IPI00850315 UniGene:Mm.270484
ProteinModelPortal:Q9QXP6 SMR:Q9QXP6 STRING:Q9QXP6
PhosphoSite:Q9QXP6 PaxDb:Q9QXP6 PRIDE:Q9QXP6
Ensembl:ENSMUST00000114822 InParanoid:Q9QXP6 ChiTaRS:MKRN1
Bgee:Q9QXP6 CleanEx:MM_MKRN1 Genevestigator:Q9QXP6
GermOnline:ENSMUSG00000029922 Uniprot:Q9QXP6
Length = 481
Score = 81 (33.6 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 38/136 (27%), Positives = 57/136 (41%)
Query: 157 LCKKFYNGEECPYGDRCNFLHEDPAKFRD----DSGRYRESSAISIGTTGPPVVTGSCSN 212
+CK F G C YGDRC + H P K + D +A S ++G + S
Sbjct: 89 VCKYFQRGY-CVYGDRCRYEHSKPLKQEEVTATDLSAKPSLAASSSLSSGVGSLAEMNSG 147
Query: 213 QAEGNRP----VGSNCVKPVYWKTKLCIKWTQGQCPFGEKCHFAHGQSELQVIGGRTEGE 268
+AE P VG+ W I++ GQ P+ + A +E+ G T+ E
Sbjct: 148 EAESRNPSFPTVGAGSED---WVN--AIEFVPGQ-PYCGRT--APSCTEVPPQGSVTKEE 199
Query: 269 AGN-PSFISVKPQLVP 283
+ P+ + K QL P
Sbjct: 200 SEKEPTTVETKKQLCP 215
Score = 78 (32.5 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 96 CAKFKHGACRNGENCNFAHGMED 118
C F HG C+ G+NC ++H + D
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSD 83
>UNIPROTKB|G3V789 [details] [associations]
symbol:Mkrn1 "Protein Mkrn1" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000571 Pfam:PF00642 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50103 SMART:SM00184 SMART:SM00356 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:CH473959 InterPro:IPR017907
InterPro:IPR026290 PANTHER:PTHR11224 GeneTree:ENSGT00390000014093
OMA:YQRGCCA ProteinModelPortal:G3V789 Ensembl:ENSRNOT00000013124
Uniprot:G3V789
Length = 481
Score = 80 (33.2 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 35/136 (25%), Positives = 57/136 (41%)
Query: 157 LCKKFYNGEECPYGDRCNFLHEDPAKFRDDSGRYRESSAISIGTTGPPVVTGSCSN---- 212
+CK F G C YGDRC + H P K + + + ++ P GS +
Sbjct: 89 VCKYFQRGY-CVYGDRCRYEHSKPLKQEEVTATDLSAKPSPAASSSLPSGVGSLAEMNPG 147
Query: 213 QAEGNRP----VGSNCVKPVYWKTKLCIKWTQGQCPFGEKCHFAHGQSELQVIGGRTEGE 268
+AE P VG+ W I++ GQ P+ + A +E+ + G T+ E
Sbjct: 148 EAESRNPNFPTVGAGSED---WVN--AIEFVPGQ-PYCGRT--APSCTEVPLQGSVTKEE 199
Query: 269 AGN-PSFISVKPQLVP 283
+ P+ + + QL P
Sbjct: 200 SEKEPTTVETEKQLCP 215
Score = 78 (32.5 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 96 CAKFKHGACRNGENCNFAHGMED 118
C F HG C+ G+NC ++H + D
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSD 83
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.134 0.429 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 338 324 0.00086 116 3 11 22 0.45 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 70
No. of states in DFA: 616 (65 KB)
Total size of DFA: 273 KB (2142 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 27.82u 0.20s 28.02t Elapsed: 00:00:01
Total cpu time: 27.82u 0.20s 28.02t Elapsed: 00:00:01
Start: Thu May 9 21:29:00 2013 End: Thu May 9 21:29:01 2013