BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019628
(338 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 508 bits (1309), Expect = e-144, Method: Compositional matrix adjust.
Identities = 239/315 (75%), Positives = 276/315 (87%), Gaps = 2/315 (0%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIV 61
+RYE+VKDIGSGNFGVA+L+RDK + EL+AVK+IERG+KIDE+V+REI+NHRSL+HPNIV
Sbjct: 18 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIV 77
Query: 62 RFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICH 121
RFKEV+LTPTHLAIVMEYA+GGELFERICNAGRFSEDEARFFFQQLISGVSYCH+MQ+CH
Sbjct: 78 RFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCH 137
Query: 122 RDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKIA 181
RDLKLENTLLDGS APR+KICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL KKEYDGK+A
Sbjct: 138 RDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVA 197
Query: 182 DVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIF 241
DVWSCGVTLYVMLVGAYPFEDPE+PKNFRKTI RIL+V Y+ PDYV +S EC+HL+SRIF
Sbjct: 198 DVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIF 257
Query: 242 VANSEKRITIPEIKNHPWFLRNLPIELTEGGSW--QSHDVNNPSQSLEEVLSLIHEATKP 299
VA+ KRI+IPEI+NH WFL+NLP +L + Q + P QS+EE++ +I EAT P
Sbjct: 258 VADPAKRISIPEIRNHEWFLKNLPADLMNDNTMTTQFAASDQPGQSIEEIMQIIAEATVP 317
Query: 300 LEAPRVGGHLLGSSM 314
+ H L S+
Sbjct: 318 PAGTQNLNHYLTGSL 332
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 507 bits (1305), Expect = e-144, Method: Compositional matrix adjust.
Identities = 238/315 (75%), Positives = 276/315 (87%), Gaps = 2/315 (0%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIV 61
+RYE+VKDIGSGNFGVA+L+RDK + EL+AVK+IERG+KIDE+V+REI+NHRSL+HPNIV
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIV 78
Query: 62 RFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICH 121
RFKEV+LTPTHLAIVMEYA+GGELFERICNAGRFSEDEARFFFQQLISGVSYCH+MQ+CH
Sbjct: 79 RFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCH 138
Query: 122 RDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKIA 181
RDLKLENTLLDGS APR+KIC FGYSKSSVLHSQPKSTVGTPAYIAPEVL KKEYDGK+A
Sbjct: 139 RDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVA 198
Query: 182 DVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIF 241
DVWSCGVTLYVMLVGAYPFEDPE+PKNFRKTI RIL+V Y+ PDYV +S EC+HL+SRIF
Sbjct: 199 DVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIF 258
Query: 242 VANSEKRITIPEIKNHPWFLRNLPIELTEGGSW--QSHDVNNPSQSLEEVLSLIHEATKP 299
VA+ KRI+IPEI+NH WFL+NLP +L + Q + + P QS+EE++ +I EAT P
Sbjct: 259 VADPAKRISIPEIRNHEWFLKNLPADLMNDNTMTTQFDESDQPGQSIEEIMQIIAEATVP 318
Query: 300 LEAPRVGGHLLGSSM 314
+ H L S+
Sbjct: 319 PAGTQNLNHYLTGSL 333
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 505 bits (1301), Expect = e-143, Method: Compositional matrix adjust.
Identities = 237/315 (75%), Positives = 275/315 (87%), Gaps = 2/315 (0%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIV 61
+RYE+VKDIGSGNFGVA+L+RDK + EL+AVK+IERG+KIDE+V+REI+NHRSL+HPNIV
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIV 78
Query: 62 RFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICH 121
RFKEV+LTPTHLAIVMEYA+GGELFERICNAGRFSEDEARFFFQQLISGVSYCH+MQ+CH
Sbjct: 79 RFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCH 138
Query: 122 RDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKIA 181
RDLKLENTLLDGS APR+KIC FGYSKSSVLHSQPK TVGTPAYIAPEVL KKEYDGK+A
Sbjct: 139 RDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLKKEYDGKVA 198
Query: 182 DVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIF 241
DVWSCGVTLYVMLVGAYPFEDPE+PKNFRKTI RIL+V Y+ PDYV +S EC+HL+SRIF
Sbjct: 199 DVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIF 258
Query: 242 VANSEKRITIPEIKNHPWFLRNLPIELTEGGSW--QSHDVNNPSQSLEEVLSLIHEATKP 299
VA+ KRI+IPEI+NH WFL+NLP +L + Q + + P QS+EE++ +I EAT P
Sbjct: 259 VADPAKRISIPEIRNHEWFLKNLPADLMNDNTMTTQFDESDQPGQSIEEIMQIIAEATVP 318
Query: 300 LEAPRVGGHLLGSSM 314
+ H L S+
Sbjct: 319 PAGTQNLNHYLTGSL 333
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 504 bits (1299), Expect = e-143, Method: Compositional matrix adjust.
Identities = 237/315 (75%), Positives = 275/315 (87%), Gaps = 2/315 (0%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIV 61
+RYE+VKDIGSGNFGVA+L+RDK + EL+AVK+IERG+KI +V+REI+NHRSL+HPNIV
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLRHPNIV 78
Query: 62 RFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICH 121
RFKEV+LTPTHLAIVMEYA+GGELFERICNAGRFSEDEARFFFQQLISGVSYCH+MQ+CH
Sbjct: 79 RFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCH 138
Query: 122 RDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKIA 181
RDLKLENTLLDGS APR+KICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL KKEYDGK+A
Sbjct: 139 RDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVA 198
Query: 182 DVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIF 241
DVWSCGVTLYVMLVGAYPFEDPE+PKNFRKTI RIL+V Y+ PDYV +S EC+HL+SRIF
Sbjct: 199 DVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIF 258
Query: 242 VANSEKRITIPEIKNHPWFLRNLPIELTEGGSW--QSHDVNNPSQSLEEVLSLIHEATKP 299
VA+ KRI+IPEI+NH WFL+NLP +L + Q + + P QS+EE++ +I EAT P
Sbjct: 259 VADPAKRISIPEIRNHEWFLKNLPADLMNDNTMTTQFDESDQPGQSIEEIMQIIAEATVP 318
Query: 300 LEAPRVGGHLLGSSM 314
+ H L S+
Sbjct: 319 PAGTQNLNHYLTGSL 333
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 493 bits (1269), Expect = e-140, Method: Compositional matrix adjust.
Identities = 229/298 (76%), Positives = 266/298 (89%), Gaps = 2/298 (0%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIV 61
+RYE+VKDIG+GNFGVA+L+RDK EL+AVK+IERG+KIDE+V+REI+NHRSL+HPNIV
Sbjct: 19 DRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNIV 78
Query: 62 RFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICH 121
RFKEV+LTPTHLAIVMEYA+GGELFERICNAGRFSEDEARFFFQQLISGVSY H+MQ+ H
Sbjct: 79 RFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQVAH 138
Query: 122 RDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKIA 181
RDLKLENTLLDGS APR+KI DFGYSK+SVLHSQPKS VGTPAYIAPEVL KKEYDGK+A
Sbjct: 139 RDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLKKEYDGKVA 198
Query: 182 DVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIF 241
DVWSCGVTLYVMLVGAYPFEDPE+PKNFRKTI RIL+V Y+ PDYV +S EC+HL+SRIF
Sbjct: 199 DVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIF 258
Query: 242 VANSEKRITIPEIKNHPWFLRNLPIELTEGGSW--QSHDVNNPSQSLEEVLSLIHEAT 297
VA+ KRI+IPEI+NH WFL+NLP +L + Q + + P QS+EE++ +I EAT
Sbjct: 259 VADPAKRISIPEIRNHEWFLKNLPADLMNDNTMTTQFDESDQPGQSIEEIMQIIAEAT 316
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 491 bits (1265), Expect = e-139, Method: Compositional matrix adjust.
Identities = 232/301 (77%), Positives = 267/301 (88%), Gaps = 4/301 (1%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIV 61
+RY+ VKDIGSGNFGVA+L+RDK T+EL+AVK+IERG IDE+VQREI+NHRSL+HPNIV
Sbjct: 20 DRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIV 79
Query: 62 RFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICH 121
RFKEV+LTPTHLAI+MEYA+GGEL+ERICNAGRFSEDEARFFFQQL+SGVSYCHSMQICH
Sbjct: 80 RFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICH 139
Query: 122 RDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKIA 181
RDLKLENTLLDGS APR+KICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL ++EYDGKIA
Sbjct: 140 RDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIA 199
Query: 182 DVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIF 241
DVWSCGVTLYVMLVGAYPFEDPE+P+++RKTI RILSV YS PD +R+S EC HL+SRIF
Sbjct: 200 DVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHLISRIF 259
Query: 242 VANSEKRITIPEIKNHPWFLRNLPIEL---TEGGSWQSHDVNNPSQSLEEVLSLIHEATK 298
VA+ RI+IPEIK H WFL+NLP +L + GS Q + P QSL+ ++ +I EAT
Sbjct: 260 VADPATRISIPEIKTHSWFLKNLPADLMNESNTGS-QFQEPEQPMQSLDTIMQIISEATI 318
Query: 299 P 299
P
Sbjct: 319 P 319
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 211 bits (537), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 121/266 (45%), Positives = 163/266 (61%), Gaps = 13/266 (4%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERG--QKIDEH--VQREIMNHRSLKHPN 59
Y I + +G G+FG KL T++ +A+KFI R +K D H V+REI + L+HP+
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPH 70
Query: 60 IVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQI 119
I++ +V+ TPT + +V+EYA GGELF+ I R +EDE R FFQQ+I + YCH +I
Sbjct: 71 IIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKI 129
Query: 120 CHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGK 179
HRDLK EN LLD + VKI DFG S + K++ G+P Y APEV+ K Y G
Sbjct: 130 VHRDLKPENLLLDDNL--NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGP 187
Query: 180 IADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSR 239
DVWSCG+ LYVMLVG PF+D P F+K + S Y PD+ +S + L+ R
Sbjct: 188 EVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKK----VNSCVYVMPDF--LSPGAQSLIRR 241
Query: 240 IFVANSEKRITIPEIKNHPWFLRNLP 265
+ VA+ +RITI EI+ PWF NLP
Sbjct: 242 MIVADPMQRITIQEIRRDPWFNVNLP 267
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 194 bits (493), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 107/267 (40%), Positives = 150/267 (56%), Gaps = 14/267 (5%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDE-----HVQREIMNHRSLKHP 58
Y + +G G FG K+ + T +AVK + R QKI ++REI N + +HP
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNR-QKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQ 118
+I++ +V+ TPT +VMEY +GGELF+ IC GR E EAR FQQ++S V YCH
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHM 131
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDG 178
+ HRDLK EN LLD KI DFG S +++ G+P Y APEV++ + Y G
Sbjct: 132 VVHRDLKPENVLLDAHM--NAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAG 189
Query: 179 KIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHLLS 238
D+WSCGV LY +L G PF+D P F+K G + + P+Y+ S+ LL
Sbjct: 190 PEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYI----PEYLNRSVAT--LLM 243
Query: 239 RIFVANSEKRITIPEIKNHPWFLRNLP 265
+ + KR TI +I+ H WF ++LP
Sbjct: 244 HMLQVDPLKRATIKDIREHEWFKQDLP 270
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 194 bits (493), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 106/260 (40%), Positives = 148/260 (56%), Gaps = 11/260 (4%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQ---REIMNHRSLKHPNI 60
Y ++K IG GNF KL R T + +AVK I++ Q +Q RE+ + L HPNI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQIC 120
V+ EV+ T L +VMEYA+GGE+F+ + GR E EAR F+Q++S V YCH I
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIV 135
Query: 121 HRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKI 180
HRDLK EN LLD +KI DFG+S ++ + G+P Y APE+ K+YDG
Sbjct: 136 HRDLKAENLLLDADM--NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPE 193
Query: 181 ADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRI 240
DVWS GV LY ++ G+ PF D +N ++ R+L Y P Y +S +C++LL +
Sbjct: 194 VDVWSLGVILYTLVSGSLPF----DGQNLKELRERVLRGKYRIPFY--MSTDCENLLKKF 247
Query: 241 FVANSEKRITIPEIKNHPWF 260
+ N KR T+ +I W
Sbjct: 248 LILNPSKRGTLEQIMKDRWM 267
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 194 bits (493), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 106/260 (40%), Positives = 148/260 (56%), Gaps = 11/260 (4%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQ---REIMNHRSLKHPNI 60
Y ++K IG GNF KL R T + +AVK I++ Q +Q RE+ + L HPNI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQIC 120
V+ EV+ T L +VMEYA+GGE+F+ + GR E EAR F+Q++S V YCH I
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIV 135
Query: 121 HRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKI 180
HRDLK EN LLD +KI DFG+S ++ + G+P Y APE+ K+YDG
Sbjct: 136 HRDLKAENLLLDADM--NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPE 193
Query: 181 ADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRI 240
DVWS GV LY ++ G+ PF D +N ++ R+L Y P Y +S +C++LL +
Sbjct: 194 VDVWSLGVILYTLVSGSLPF----DGQNLKELRERVLRGKYRIPFY--MSTDCENLLKKF 247
Query: 241 FVANSEKRITIPEIKNHPWF 260
+ N KR T+ +I W
Sbjct: 248 LILNPSKRGTLEQIMKDRWM 267
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 194 bits (492), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 106/259 (40%), Positives = 148/259 (57%), Gaps = 11/259 (4%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQ---REIMNHRSLKHPNI 60
Y ++K IG GNF KL R T +A+K I++ Q +Q RE+ + L HPNI
Sbjct: 14 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 73
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQIC 120
V+ EV+ T L ++MEYA+GGE+F+ + GR E EAR F+Q++S V YCH +I
Sbjct: 74 VKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIV 133
Query: 121 HRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKI 180
HRDLK EN LLD +KI DFG+S + + + G+P Y APE+ K+YDG
Sbjct: 134 HRDLKAENLLLDADM--NIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYDGPE 191
Query: 181 ADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRI 240
DVWS GV LY ++ G+ PF D +N ++ R+L Y P Y +S +C++LL R
Sbjct: 192 VDVWSLGVILYTLVSGSLPF----DGQNLKELRERVLRGKYRIPFY--MSTDCENLLKRF 245
Query: 241 FVANSEKRITIPEIKNHPW 259
V N KR T+ +I W
Sbjct: 246 LVLNPIKRGTLEQIMKDRW 264
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 194 bits (492), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 107/267 (40%), Positives = 149/267 (55%), Gaps = 14/267 (5%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDE-----HVQREIMNHRSLKHP 58
Y + +G G FG K+ + T +AVK + R QKI ++REI N + +HP
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNR-QKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQ 118
+I++ +V+ TPT +VMEY +GGELF+ IC GR E EAR FQQ++S V YCH
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHM 131
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDG 178
+ HRDLK EN LLD KI DFG S + + G+P Y APEV++ + Y G
Sbjct: 132 VVHRDLKPENVLLDAHM--NAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYAG 189
Query: 179 KIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHLLS 238
D+WSCGV LY +L G PF+D P F+K G + + P+Y+ S+ LL
Sbjct: 190 PEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYI----PEYLNRSVAT--LLM 243
Query: 239 RIFVANSEKRITIPEIKNHPWFLRNLP 265
+ + KR TI +I+ H WF ++LP
Sbjct: 244 HMLQVDPLKRATIKDIREHEWFKQDLP 270
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 194 bits (492), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 106/260 (40%), Positives = 147/260 (56%), Gaps = 11/260 (4%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQ---REIMNHRSLKHPNI 60
Y ++K IG GNF KL R T + +AVK I++ Q +Q RE+ + L HPNI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQIC 120
V+ EV+ T L +VMEYA+GGE+F+ + GR E EAR F+Q++S V YCH I
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIV 135
Query: 121 HRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKI 180
HRDLK EN LLD +KI DFG+S ++ + G P Y APE+ K+YDG
Sbjct: 136 HRDLKAENLLLDADM--NIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPE 193
Query: 181 ADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRI 240
DVWS GV LY ++ G+ PF D +N ++ R+L Y P Y +S +C++LL +
Sbjct: 194 VDVWSLGVILYTLVSGSLPF----DGQNLKELRERVLRGKYRIPFY--MSTDCENLLKKF 247
Query: 241 FVANSEKRITIPEIKNHPWF 260
+ N KR T+ +I W
Sbjct: 248 LILNPSKRGTLEQIMKDRWM 267
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 105/260 (40%), Positives = 148/260 (56%), Gaps = 11/260 (4%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQ---REIMNHRSLKHPNI 60
Y ++K IG GNF KL R T + +AV+ I++ Q +Q RE+ + L HPNI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQIC 120
V+ EV+ T L +VMEYA+GGE+F+ + GR E EAR F+Q++S V YCH I
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIV 135
Query: 121 HRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKI 180
HRDLK EN LLD +KI DFG+S ++ + G+P Y APE+ K+YDG
Sbjct: 136 HRDLKAENLLLDADM--NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPE 193
Query: 181 ADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRI 240
DVWS GV LY ++ G+ PF D +N ++ R+L Y P Y +S +C++LL +
Sbjct: 194 VDVWSLGVILYTLVSGSLPF----DGQNLKELRERVLRGKYRIPFY--MSTDCENLLKKF 247
Query: 241 FVANSEKRITIPEIKNHPWF 260
+ N KR T+ +I W
Sbjct: 248 LILNPSKRGTLEQIMKDRWM 267
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 193 bits (490), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 106/259 (40%), Positives = 147/259 (56%), Gaps = 11/259 (4%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQ---REIMNHRSLKHPNI 60
Y ++K IG GNF KL R T +A+K I++ Q +Q RE+ + L HPNI
Sbjct: 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 76
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQIC 120
V+ EV+ T L ++MEYA+GGE+F+ + GR E EAR F+Q++S V YCH +I
Sbjct: 77 VKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIV 136
Query: 121 HRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKI 180
HRDLK EN LLD +KI DFG+S + + + G P Y APE+ K+YDG
Sbjct: 137 HRDLKAENLLLDADM--NIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPE 194
Query: 181 ADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRI 240
DVWS GV LY ++ G+ PF D +N ++ R+L Y P Y +S +C++LL R
Sbjct: 195 VDVWSLGVILYTLVSGSLPF----DGQNLKELRERVLRGKYRIPFY--MSTDCENLLKRF 248
Query: 241 FVANSEKRITIPEIKNHPW 259
V N KR T+ +I W
Sbjct: 249 LVLNPIKRGTLEQIMKDRW 267
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 192 bits (489), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/260 (40%), Positives = 147/260 (56%), Gaps = 11/260 (4%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQ---REIMNHRSLKHPNI 60
Y ++K IG GNF KL R T + +AV+ I++ Q +Q RE+ + L HPNI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQIC 120
V+ EV+ T L +VMEYA+GGE+F+ + GR E EAR F+Q++S V YCH I
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIV 135
Query: 121 HRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKI 180
HRDLK EN LLD +KI DFG+S ++ G+P Y APE+ K+YDG
Sbjct: 136 HRDLKAENLLLDADM--NIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYDGPE 193
Query: 181 ADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRI 240
DVWS GV LY ++ G+ PF D +N ++ R+L Y P Y +S +C++LL +
Sbjct: 194 VDVWSLGVILYTLVSGSLPF----DGQNLKELRERVLRGKYRIPFY--MSTDCENLLKKF 247
Query: 241 FVANSEKRITIPEIKNHPWF 260
+ N KR T+ +I W
Sbjct: 248 LILNPSKRGTLEQIMKDRWM 267
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 190 bits (483), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 105/260 (40%), Positives = 147/260 (56%), Gaps = 11/260 (4%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQ---REIMNHRSLKHPNI 60
Y ++K IG GNF KL R T + +AVK I++ Q +Q RE+ + L HPNI
Sbjct: 9 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 68
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQIC 120
V+ EV+ T L +VMEYA+GGE+F+ + G E EAR F+Q++S V YCH I
Sbjct: 69 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKFIV 128
Query: 121 HRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKI 180
HRDLK EN LLD +KI DFG+S ++ + G+P Y APE+ K+YDG
Sbjct: 129 HRDLKAENLLLDADM--NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPE 186
Query: 181 ADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRI 240
DVWS GV LY ++ G+ PF D +N ++ R+L Y P Y +S +C++LL +
Sbjct: 187 VDVWSLGVILYTLVSGSLPF----DGQNLKELRERVLRGKYRIPFY--MSTDCENLLKKF 240
Query: 241 FVANSEKRITIPEIKNHPWF 260
+ N KR T+ +I W
Sbjct: 241 LILNPSKRGTLEQIMKDRWM 260
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 189 bits (481), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 105/259 (40%), Positives = 145/259 (55%), Gaps = 11/259 (4%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQ---REIMNHRSLKHPNI 60
Y ++K IG GNF KL R T + +AVK I++ Q +Q RE+ + L HPNI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNI 75
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQIC 120
V+ EV+ T L +V EYA+GGE+F+ + GR E EAR F+Q++S V YCH I
Sbjct: 76 VKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKFIV 135
Query: 121 HRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKI 180
HRDLK EN LLD +KI DFG+S ++ + G P Y APE+ K+YDG
Sbjct: 136 HRDLKAENLLLDADX--NIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPE 193
Query: 181 ADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRI 240
DVWS GV LY ++ G+ PF D +N ++ R+L Y P Y S +C++LL +
Sbjct: 194 VDVWSLGVILYTLVSGSLPF----DGQNLKELRERVLRGKYRIPFY--XSTDCENLLKKF 247
Query: 241 FVANSEKRITIPEIKNHPW 259
+ N KR T+ +I W
Sbjct: 248 LILNPSKRGTLEQIXKDRW 266
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 189 bits (479), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 111/286 (38%), Positives = 161/286 (56%), Gaps = 17/286 (5%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDE-----HVQREIMNHRSLKHPNIVRFK 64
+G G FG K+ + + T +AVK + R QKI ++REI N + +HP+I++
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNR-QKIRSLDVVGKIRREIQNLKLFRHPHIIKLY 82
Query: 65 EVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICHRDL 124
+V+ TP+ + +VMEY +GGELF+ IC GR E E+R FQQ++SGV YCH + HRDL
Sbjct: 83 QVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDL 142
Query: 125 KLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKIADVW 184
K EN LLD KI DFG S + + G+P Y APEV++ + Y G D+W
Sbjct: 143 KPENVLLDAHM--NAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYAGPEVDIW 200
Query: 185 SCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVAN 244
S GV LY +L G PF+D P F+K I + P Y+ S+ LL + +
Sbjct: 201 SSGVILYALLCGTLPFDDDHVPTLFKKICDGI----FYTPQYLNPSVIS--LLKHMLQVD 254
Query: 245 SEKRITIPEIKNHPWFLRNLPIEL-TEGGSWQSHDVNNPSQSLEEV 289
KR TI +I+ H WF ++LP L E S+ S +++ ++L+EV
Sbjct: 255 PMKRATIKDIREHEWFKQDLPKYLFPEDPSYSSTMIDD--EALKEV 298
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 184 bits (468), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 110/271 (40%), Positives = 151/271 (55%), Gaps = 13/271 (4%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERG----QKIDEHVQREIMNHRSLKHPN 59
Y+IVK +G G+FG KL T + +A+K I + + ++REI R L+HP+
Sbjct: 16 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 75
Query: 60 IVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQI 119
I++ +V+ + + +V+EYA G ELF+ I + SE EAR FFQQ+IS V YCH +I
Sbjct: 76 IIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 134
Query: 120 CHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGK 179
HRDLK EN LLD VKI DFG S + K++ G+P Y APEV++ K Y G
Sbjct: 135 VHRDLKPENLLLDEHL--NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGP 192
Query: 180 IADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSR 239
DVWSCGV LYVML PF+D P F+ + Y+ P + +S L+ R
Sbjct: 193 EVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGV----YTLPKF--LSPGAAGLIKR 246
Query: 240 IFVANSEKRITIPEIKNHPWFLRNLPIELTE 270
+ + N RI+I EI WF +LP L E
Sbjct: 247 MLIVNPLNRISIHEIMQDDWFKVDLPEYLLE 277
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 184 bits (466), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 108/266 (40%), Positives = 149/266 (56%), Gaps = 13/266 (4%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERG----QKIDEHVQREIMNHRSLKHPN 59
Y+IVK +G G+FG KL T + +A+K I + + ++REI R L+HP+
Sbjct: 15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 74
Query: 60 IVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQI 119
I++ +V+ + + +V+EYA G ELF+ I + SE EAR FFQQ+IS V YCH +I
Sbjct: 75 IIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 133
Query: 120 CHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGK 179
HRDLK EN LLD VKI DFG S + K++ G+P Y APEV++ K Y G
Sbjct: 134 VHRDLKPENLLLDEHL--NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGP 191
Query: 180 IADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSR 239
DVWSCGV LYVML PF+D P F+ + Y+ P + +S L+ R
Sbjct: 192 EVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGV----YTLPKF--LSPGAAGLIKR 245
Query: 240 IFVANSEKRITIPEIKNHPWFLRNLP 265
+ + N RI+I EI WF +LP
Sbjct: 246 MLIVNPLNRISIHEIMQDDWFKVDLP 271
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 183 bits (465), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 108/266 (40%), Positives = 149/266 (56%), Gaps = 13/266 (4%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERG----QKIDEHVQREIMNHRSLKHPN 59
Y+IVK +G G+FG KL T + +A+K I + + ++REI R L+HP+
Sbjct: 10 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 69
Query: 60 IVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQI 119
I++ +V+ + + +V+EYA G ELF+ I + SE EAR FFQQ+IS V YCH +I
Sbjct: 70 IIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 128
Query: 120 CHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGK 179
HRDLK EN LLD VKI DFG S + K++ G+P Y APEV++ K Y G
Sbjct: 129 VHRDLKPENLLLDEHL--NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGP 186
Query: 180 IADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSR 239
DVWSCGV LYVML PF+D P F+ + Y+ P + +S L+ R
Sbjct: 187 EVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGV----YTLPKF--LSPGAAGLIKR 240
Query: 240 IFVANSEKRITIPEIKNHPWFLRNLP 265
+ + N RI+I EI WF +LP
Sbjct: 241 MLIVNPLNRISIHEIMQDDWFKVDLP 266
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 183 bits (464), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 108/266 (40%), Positives = 149/266 (56%), Gaps = 13/266 (4%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERG----QKIDEHVQREIMNHRSLKHPN 59
Y+IVK +G G+FG KL T + +A+K I + + ++REI R L+HP+
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 65
Query: 60 IVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQI 119
I++ +V+ + + +V+EYA G ELF+ I + SE EAR FFQQ+IS V YCH +I
Sbjct: 66 IIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 124
Query: 120 CHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGK 179
HRDLK EN LLD VKI DFG S + K++ G+P Y APEV++ K Y G
Sbjct: 125 VHRDLKPENLLLDEHL--NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGP 182
Query: 180 IADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSR 239
DVWSCGV LYVML PF+D P F+ + Y+ P + +S L+ R
Sbjct: 183 EVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGV----YTLPKF--LSPGAAGLIKR 236
Query: 240 IFVANSEKRITIPEIKNHPWFLRNLP 265
+ + N RI+I EI WF +LP
Sbjct: 237 MLIVNPLNRISIHEIMQDDWFKVDLP 262
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 180 bits (457), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 107/260 (41%), Positives = 149/260 (57%), Gaps = 11/260 (4%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQ---REIMNHRSLKHPNI 60
Y + K IG GNF KL R T +AVK I++ Q +Q RE+ + L HPNI
Sbjct: 17 YRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 76
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQIC 120
V+ EV+ T L +VMEYA+GGE+F+ + GR E EAR F+Q++S V YCH I
Sbjct: 77 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKYIV 136
Query: 121 HRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKI 180
HRDLK EN LLDG +KI DFG+S + ++ + G+P Y APE+ K+YDG
Sbjct: 137 HRDLKAENLLLDGDM--NIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPE 194
Query: 181 ADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRI 240
DVWS GV LY ++ G+ PF D +N ++ R+L Y P Y +S +C++LL ++
Sbjct: 195 VDVWSLGVILYTLVSGSLPF----DGQNLKELRERVLRGKYRIPFY--MSTDCENLLKKL 248
Query: 241 FVANSEKRITIPEIKNHPWF 260
V N KR ++ +I W
Sbjct: 249 LVLNPIKRGSLEQIMKDRWM 268
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 168 bits (426), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 103/268 (38%), Positives = 145/268 (54%), Gaps = 13/268 (4%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNH----RSLKH 57
+RY+ VK +GSG +G L +DK T A+K I++ +++ + L H
Sbjct: 4 DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDH 63
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSM 117
PNI++ E + +VME GGELF+ I +FSE +A +Q++SG +Y H
Sbjct: 64 PNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKH 123
Query: 118 QICHRDLKLENTLLDG-STAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
I HRDLK EN LL+ S +KI DFG S + + K +GT YIAPEVL KK Y
Sbjct: 124 NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKK-Y 182
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSF--PDYVRVSLECK 234
D K DVWSCGV LY++L G PF D ++ + R+ +SF PD+ +VS E K
Sbjct: 183 DEK-CDVWSCGVILYILLCGYPPFGGQTD----QEILKRVEKGKFSFDPPDWTQVSDEAK 237
Query: 235 HLLSRIFVANSEKRITIPEIKNHPWFLR 262
L+ + KRI+ E NHPW ++
Sbjct: 238 QLVKLMLTYEPSKRISAEEALNHPWIVK 265
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 167 bits (424), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 103/268 (38%), Positives = 145/268 (54%), Gaps = 13/268 (4%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNH----RSLKH 57
+RY+ VK +GSG +G L +DK T A+K I++ +++ + L H
Sbjct: 21 DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDH 80
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSM 117
PNI++ E + +VME GGELF+ I +FSE +A +Q++SG +Y H
Sbjct: 81 PNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKH 140
Query: 118 QICHRDLKLENTLLDG-STAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
I HRDLK EN LL+ S +KI DFG S + + K +GT YIAPEVL KK Y
Sbjct: 141 NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKK-Y 199
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSF--PDYVRVSLECK 234
D K DVWSCGV LY++L G PF D ++ + R+ +SF PD+ +VS E K
Sbjct: 200 DEK-CDVWSCGVILYILLCGYPPFGGQTD----QEILKRVEKGKFSFDPPDWTQVSDEAK 254
Query: 235 HLLSRIFVANSEKRITIPEIKNHPWFLR 262
L+ + KRI+ E NHPW ++
Sbjct: 255 QLVKLMLTYEPSKRISAEEALNHPWIVK 282
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 167 bits (423), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 97/267 (36%), Positives = 153/267 (57%), Gaps = 16/267 (5%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID-------EHVQREIMNHRSLK 56
Y+ +++GSG F V K R+K T A KFI++ + E ++RE+ + ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HPN++ EV T + +++E AGGELF+ + +E+EA F +Q+++GV Y HS
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 117 MQICHRDLKLEN-TLLDGST-APRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKK 174
+QI H DLK EN LLD + PR+KI DFG + ++ K+ GTPA++APE++ +
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPEIVNYE 192
Query: 175 EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPD--YVRVSLE 232
G AD+WS GV Y++L GA PF D K ++T+ + +V+Y F D + S
Sbjct: 193 PL-GLEADMWSIGVITYILLSGASPFLG--DTK--QETLANVSAVNYEFEDEYFSNTSAL 247
Query: 233 CKHLLSRIFVANSEKRITIPEIKNHPW 259
K + R+ V + +KR+TI + HPW
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 166 bits (419), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/267 (35%), Positives = 152/267 (56%), Gaps = 16/267 (5%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID-------EHVQREIMNHRSLK 56
Y+ +++GSG F V K R+K T A KFI++ + E ++RE+ + ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HPN++ EV T + +++E AGGELF+ + +E+EA F +Q+++GV Y HS
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 117 MQICHRDLKLEN-TLLDGST-APRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKK 174
+QI H DLK EN LLD + PR+KI DFG + ++ K+ GTP ++APE++ +
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 175 EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPD--YVRVSLE 232
G AD+WS GV Y++L GA PF D K ++T+ + +V+Y F D + S
Sbjct: 193 PL-GLEADMWSIGVITYILLSGASPFLG--DTK--QETLANVSAVNYEFEDEYFSNTSAL 247
Query: 233 CKHLLSRIFVANSEKRITIPEIKNHPW 259
K + R+ V + +KR+TI + HPW
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 166 bits (419), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/267 (35%), Positives = 152/267 (56%), Gaps = 16/267 (5%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID-------EHVQREIMNHRSLK 56
Y+ +++GSG F V K R+K T A KFI++ + E ++RE+ + ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HPN++ EV T + +++E AGGELF+ + +E+EA F +Q+++GV Y HS
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 117 MQICHRDLKLEN-TLLDGST-APRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKK 174
+QI H DLK EN LLD + PR+KI DFG + ++ K+ GTP ++APE++ +
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 175 EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPD--YVRVSLE 232
G AD+WS GV Y++L GA PF D K ++T+ + +V+Y F D + S
Sbjct: 193 PL-GLEADMWSIGVITYILLSGASPFLG--DTK--QETLANVSAVNYEFEDEYFSNTSAL 247
Query: 233 CKHLLSRIFVANSEKRITIPEIKNHPW 259
K + R+ V + +KR+TI + HPW
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/267 (35%), Positives = 152/267 (56%), Gaps = 16/267 (5%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID-------EHVQREIMNHRSLK 56
Y+ +++GSG F V K R+K T A KFI++ + E ++RE+ + ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HPN++ EV T + +++E AGGELF+ + +E+EA F +Q+++GV Y HS
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 117 MQICHRDLKLEN-TLLDGST-APRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKK 174
+QI H DLK EN LLD + PR+KI DFG + ++ K+ GTP ++APE++ +
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 175 EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPD--YVRVSLE 232
G AD+WS GV Y++L GA PF D K ++T+ + +V+Y F D + S
Sbjct: 193 PL-GLEADMWSIGVITYILLSGASPFLG--DTK--QETLANVSAVNYEFEDEYFSNTSAL 247
Query: 233 CKHLLSRIFVANSEKRITIPEIKNHPW 259
K + R+ V + +KR+TI + HPW
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/267 (35%), Positives = 152/267 (56%), Gaps = 16/267 (5%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID-------EHVQREIMNHRSLK 56
Y+ +++GSG F V K R+K T A KFI++ + E ++RE+ + ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HPN++ EV T + +++E AGGELF+ + +E+EA F +Q+++GV Y HS
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 117 MQICHRDLKLEN-TLLDGST-APRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKK 174
+QI H DLK EN LLD + PR+KI DFG + ++ K+ GTP ++APE++ +
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 175 EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPD--YVRVSLE 232
G AD+WS GV Y++L GA PF D K ++T+ + +V+Y F D + S
Sbjct: 193 PL-GLEADMWSIGVITYILLSGASPFLG--DTK--QETLANVSAVNYEFEDEYFSNTSAL 247
Query: 233 CKHLLSRIFVANSEKRITIPEIKNHPW 259
K + R+ V + +KR+TI + HPW
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/267 (35%), Positives = 152/267 (56%), Gaps = 16/267 (5%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID-------EHVQREIMNHRSLK 56
Y+ +++GSG F V K R+K T A KFI++ + E ++RE+ + ++
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HPN++ EV T + +++E AGGELF+ + +E+EA F +Q+++GV Y HS
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 131
Query: 117 MQICHRDLKLEN-TLLDGST-APRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKK 174
+QI H DLK EN LLD + PR+KI DFG + ++ K+ GTP ++APE++ +
Sbjct: 132 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 191
Query: 175 EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPD--YVRVSLE 232
G AD+WS GV Y++L GA PF D K ++T+ + +V+Y F D + S
Sbjct: 192 PL-GLEADMWSIGVITYILLSGASPFLG--DTK--QETLANVSAVNYEFEDEYFSNTSAL 246
Query: 233 CKHLLSRIFVANSEKRITIPEIKNHPW 259
K + R+ V + +KR+TI + HPW
Sbjct: 247 AKDFIRRLLVKDPKKRMTIQDSLQHPW 273
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/267 (35%), Positives = 152/267 (56%), Gaps = 16/267 (5%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID-------EHVQREIMNHRSLK 56
Y+ +++GSG F V K R+K T A KFI++ + E ++RE+ + ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HPN++ EV T + +++E AGGELF+ + +E+EA F +Q+++GV Y HS
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 117 MQICHRDLKLEN-TLLDGST-APRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKK 174
+QI H DLK EN LLD + PR+KI DFG + ++ K+ GTP ++APE++ +
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 175 EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPD--YVRVSLE 232
G AD+WS GV Y++L GA PF D K ++T+ + +V+Y F D + S
Sbjct: 193 PL-GLEADMWSIGVITYILLSGASPFLG--DTK--QETLANVSAVNYEFEDEYFSNTSAL 247
Query: 233 CKHLLSRIFVANSEKRITIPEIKNHPW 259
K + R+ V + +KR+TI + HPW
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/267 (35%), Positives = 152/267 (56%), Gaps = 16/267 (5%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID-------EHVQREIMNHRSLK 56
Y+ +++GSG F V K R+K T A KFI++ + E ++RE+ + ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HPN++ EV T + +++E AGGELF+ + +E+EA F +Q+++GV Y HS
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 117 MQICHRDLKLEN-TLLDGST-APRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKK 174
+QI H DLK EN LLD + PR+KI DFG + ++ K+ GTP ++APE++ +
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 175 EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPD--YVRVSLE 232
G AD+WS GV Y++L GA PF D K ++T+ + +V+Y F D + S
Sbjct: 193 PL-GLEADMWSIGVITYILLSGASPFLG--DTK--QETLANVSAVNYEFEDEYFSNTSAL 247
Query: 233 CKHLLSRIFVANSEKRITIPEIKNHPW 259
K + R+ V + +KR+TI + HPW
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/267 (35%), Positives = 152/267 (56%), Gaps = 16/267 (5%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID-------EHVQREIMNHRSLK 56
Y+ +++GSG F V K R+K T A KFI++ + E ++RE+ + ++
Sbjct: 13 YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HPN++ EV T + +++E AGGELF+ + +E+EA F +Q+++GV Y HS
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 117 MQICHRDLKLEN-TLLDGST-APRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKK 174
+QI H DLK EN LLD + PR+KI DFG + ++ K+ GTP ++APE++ +
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 175 EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPD--YVRVSLE 232
G AD+WS GV Y++L GA PF D K ++T+ + +V+Y F D + S
Sbjct: 193 PL-GLEADMWSIGVITYILLSGASPFLG--DTK--QETLANVSAVNYEFEDEYFSNTSAL 247
Query: 233 CKHLLSRIFVANSEKRITIPEIKNHPW 259
K + R+ V + +KR+TI + HPW
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/267 (35%), Positives = 152/267 (56%), Gaps = 16/267 (5%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID-------EHVQREIMNHRSLK 56
Y+ +++GSG F V K R+K T A KFI++ + E ++RE+ + ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HPN++ EV T + +++E AGGELF+ + +E+EA F +Q+++GV Y HS
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 117 MQICHRDLKLEN-TLLDGST-APRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKK 174
+QI H DLK EN LLD + PR+KI DFG + ++ K+ GTP ++APE++ +
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 175 EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPD--YVRVSLE 232
G AD+WS GV Y++L GA PF D K ++T+ + +V+Y F D + S
Sbjct: 193 PL-GLEADMWSIGVITYILLSGASPFLG--DTK--QETLANVSAVNYEFEDEYFSNTSAL 247
Query: 233 CKHLLSRIFVANSEKRITIPEIKNHPW 259
K + R+ V + +KR+TI + HPW
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/267 (35%), Positives = 152/267 (56%), Gaps = 16/267 (5%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID-------EHVQREIMNHRSLK 56
Y+ +++GSG F V K R+K T A KFI++ + E ++RE+ + ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HPN++ EV T + +++E AGGELF+ + +E+EA F +Q+++GV Y HS
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 117 MQICHRDLKLEN-TLLDGST-APRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKK 174
+QI H DLK EN LLD + PR+KI DFG + ++ K+ GTP ++APE++ +
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 175 EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPD--YVRVSLE 232
G AD+WS GV Y++L GA PF D K ++T+ + +V+Y F D + S
Sbjct: 193 PL-GLEADMWSIGVITYILLSGASPFLG--DTK--QETLANVSAVNYEFEDEYFSNTSAL 247
Query: 233 CKHLLSRIFVANSEKRITIPEIKNHPW 259
K + R+ V + +KR+TI + HPW
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/267 (35%), Positives = 152/267 (56%), Gaps = 16/267 (5%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID-------EHVQREIMNHRSLK 56
Y+ +++GSG F V K R+K T A KFI++ + E ++RE+ + ++
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HPN++ EV T + +++E AGGELF+ + +E+EA F +Q+++GV Y HS
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 131
Query: 117 MQICHRDLKLEN-TLLDGST-APRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKK 174
+QI H DLK EN LLD + PR+KI DFG + ++ K+ GTP ++APE++ +
Sbjct: 132 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 191
Query: 175 EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPD--YVRVSLE 232
G AD+WS GV Y++L GA PF D K ++T+ + +V+Y F D + S
Sbjct: 192 PL-GLEADMWSIGVITYILLSGASPFLG--DTK--QETLANVSAVNYEFEDEYFSNTSAL 246
Query: 233 CKHLLSRIFVANSEKRITIPEIKNHPW 259
K + R+ V + +KR+TI + HPW
Sbjct: 247 AKDFIRRLLVKDPKKRMTIQDSLQHPW 273
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 164 bits (415), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 96/267 (35%), Positives = 152/267 (56%), Gaps = 16/267 (5%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID-------EHVQREIMNHRSLK 56
Y+ +++GSG F V K R+K T A KFI++ + E ++RE+ + ++
Sbjct: 13 YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HPN++ EV T + +++E AGGELF+ + +E+EA F +Q+++GV Y HS
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 117 MQICHRDLKLEN-TLLDGST-APRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKK 174
+QI H DLK EN LLD + PR+KI DFG + ++ K+ GTP ++APE++ +
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 175 EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPD--YVRVSLE 232
G AD+WS GV Y++L GA PF D K ++T+ + +V+Y F D + S
Sbjct: 193 PL-GLEADMWSIGVITYILLSGASPFLG--DTK--QETLANVSAVNYEFEDEYFSNTSAL 247
Query: 233 CKHLLSRIFVANSEKRITIPEIKNHPW 259
K + R+ V + +KR+TI + HPW
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/267 (35%), Positives = 151/267 (56%), Gaps = 16/267 (5%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID-------EHVQREIMNHRSLK 56
Y+ +++GSG F V K R+K T A KFI++ + E ++RE+ + ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HPN++ EV T + ++ E AGGELF+ + +E+EA F +Q+++GV Y HS
Sbjct: 73 HPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 117 MQICHRDLKLEN-TLLDGST-APRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKK 174
+QI H DLK EN LLD + PR+KI DFG + ++ K+ GTP ++APE++ +
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 175 EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPD--YVRVSLE 232
G AD+WS GV Y++L GA PF D K ++T+ + +V+Y F D + S
Sbjct: 193 PL-GLEADMWSIGVITYILLSGASPFLG--DTK--QETLANVSAVNYEFEDEYFSNTSAL 247
Query: 233 CKHLLSRIFVANSEKRITIPEIKNHPW 259
K + R+ V + +KR+TI + HPW
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 141/264 (53%), Gaps = 12/264 (4%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERG---QKIDEHVQREIMNHRSLKHP 58
ERY IV +G G+FG +D+ T++ AVK I + K + RE+ + L HP
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQ 118
NI++ E+L + IV E GGELF+ I RFSE +A +Q+ SG++Y H
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN 141
Query: 119 ICHRDLKLENTLLDGSTAP-RVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYD 177
I HRDLK EN LL+ +KI DFG S +++ K +GT YIAPEVL + YD
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVL-RGTYD 200
Query: 178 GKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSF--PDYVRVSLECKH 235
K DVWS GV LY++L G PF KN + R+ + Y+F P + +S + K
Sbjct: 201 EK-CDVWSAGVILYILLSGTPPFY----GKNEYDILKRVETGKYAFDLPQWRTISDDAKD 255
Query: 236 LLSRIFVANSEKRITIPEIKNHPW 259
L+ ++ + RIT + HPW
Sbjct: 256 LIRKMLTFHPSLRITATQCLEHPW 279
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 159 bits (402), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/261 (36%), Positives = 134/261 (51%), Gaps = 10/261 (3%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERG--QKIDEHVQREIMNHRSLKHPNIV 61
+E + +G+G F L +K T +L AVK I + + + ++ EI R +KH NIV
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 62 RFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICH 121
+++ +P HL +VM+ +GGELF+RI G ++E +A +Q++ V Y H M I H
Sbjct: 84 ALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVH 143
Query: 122 RDLKLENTL-LDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKI 180
RDLK EN L ++ I DFG SK + GTP Y+APEVL +K Y K
Sbjct: 144 RDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPY-SKA 202
Query: 181 ADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSF--PDYVRVSLECKHLLS 238
D WS GV Y++L G PF D D K F +IL Y F P + +S K +
Sbjct: 203 VDCWSIGVIAYILLCGYPPFYDENDSKLFE----QILKAEYEFDSPYWDDISDSAKDFIR 258
Query: 239 RIFVANSEKRITIPEIKNHPW 259
+ + KR T + HPW
Sbjct: 259 NLMEKDPNKRYTCEQAARHPW 279
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 159 bits (402), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/300 (34%), Positives = 160/300 (53%), Gaps = 35/300 (11%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDE--HVQREIMNHRSLKHP 58
++ YE+ + IG+G F KL T E++A+K +++ + ++ EI ++L+H
Sbjct: 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQ 68
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQ 118
+I + VL T + +V+EY GGELF+ I + R SE+E R F+Q++S V+Y HS
Sbjct: 69 HICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQG 128
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPK--------STVGTPAYIAPEV 170
HRDLK EN L D ++K+ DFG L ++PK + G+ AY APE+
Sbjct: 129 YAHRDLKPENLLFD--EYHKLKLIDFG------LCAKPKGNKDYHLQTCCGSLAYAAPEL 180
Query: 171 LTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVS 230
+ K Y G ADVWS G+ LYV++ G PF+D N +I+ Y P ++ S
Sbjct: 181 IQGKSYLGSEADVWSMGILLYVLMCGFLPFDD----DNVMALYKKIMRGKYDVPKWLSPS 236
Query: 231 LECKHLLSRIFVANSEKRITIPEIKNHPWFLR--NLPIELTEGGSWQSHDVNNPSQSLEE 288
LL ++ + +KRI++ + NHPW ++ N P+E WQS NP L++
Sbjct: 237 --SILLLQQMLQVDPKKRISMKNLLNHPWIMQDYNYPVE------WQS---KNPFIHLDD 285
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 158 bits (400), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 141/264 (53%), Gaps = 12/264 (4%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERG---QKIDEHVQREIMNHRSLKHP 58
ERY IV +G G+FG +D+ T++ AVK I + K + RE+ + L HP
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQ 118
NI++ E+L + IV E GGELF+ I RFSE +A +Q+ SG++Y H
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN 141
Query: 119 ICHRDLKLENTLLDGSTAP-RVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYD 177
I HRDLK EN LL+ +KI DFG S +++ K +GT YIAPEVL + YD
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVL-RGTYD 200
Query: 178 GKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSF--PDYVRVSLECKH 235
K DVWS GV LY++L G PF KN + R+ + Y+F P + +S + K
Sbjct: 201 EK-CDVWSAGVILYILLSGTPPFY----GKNEYDILKRVETGKYAFDLPQWRTISDDAKD 255
Query: 236 LLSRIFVANSEKRITIPEIKNHPW 259
L+ ++ + RIT + HPW
Sbjct: 256 LIRKMLTFHPSLRITATQCLEHPW 279
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 158 bits (400), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 141/264 (53%), Gaps = 12/264 (4%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERG---QKIDEHVQREIMNHRSLKHP 58
ERY IV +G G+FG +D+ T++ AVK I + K + RE+ + L HP
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQ 118
NI++ E+L + IV E GGELF+ I RFSE +A +Q+ SG++Y H
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN 141
Query: 119 ICHRDLKLENTLLDGSTAP-RVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYD 177
I HRDLK EN LL+ +KI DFG S +++ K +GT YIAPEVL + YD
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVL-RGTYD 200
Query: 178 GKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSF--PDYVRVSLECKH 235
K DVWS GV LY++L G PF KN + R+ + Y+F P + +S + K
Sbjct: 201 EK-CDVWSAGVILYILLSGTPPFY----GKNEYDILKRVETGKYAFDLPQWRTISDDAKD 255
Query: 236 LLSRIFVANSEKRITIPEIKNHPW 259
L+ ++ + RIT + HPW
Sbjct: 256 LIRKMLTFHPSLRITATQCLEHPW 279
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 157 bits (397), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 148/267 (55%), Gaps = 14/267 (5%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQ----KIDEHVQREIMNHRSLK 56
+E +EI + +G G FG L R+K ++ +LA+K + + Q ++ ++RE+ L+
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 71
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HPNI+R T + +++EYA GE+++ + +F E + +L + +SYCHS
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHS 131
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
++ HRD+K EN LL +A +KI DFG+S + S+ + GT Y+ PE++ + +
Sbjct: 132 KRVIHRDIKPENLLL--GSAGELKIADFGWSVHAP-SSRRTTLCGTLDYLPPEMIEGRMH 188
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
D K+ D+WS GV Y LVG PFE +++T RI V ++FPD+V + L
Sbjct: 189 DEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFVTEG--ARDL 241
Query: 237 LSRIFVANSEKRITIPEIKNHPWFLRN 263
+SR+ N +R + E+ HPW N
Sbjct: 242 ISRLLKHNPSQRPMLREVLEHPWITAN 268
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 157 bits (397), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 99/262 (37%), Positives = 145/262 (55%), Gaps = 14/262 (5%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR-EIMNHRSLKHPNIVR 62
+E+ ++G G + + K T++ A+K +++ +D+ + R EI L HPNI++
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKK--TVDKKIVRTEIGVLLRLSHPNIIK 112
Query: 63 FKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICHR 122
KE+ TPT +++V+E GGELF+RI G +SE +A +Q++ V+Y H I HR
Sbjct: 113 LKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHR 172
Query: 123 DLKLENTLLDGSTAPR--VKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKI 180
DLK EN LL + AP +KI DFG SK K+ GTP Y APE+L Y G
Sbjct: 173 DLKPEN-LLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAY-GPE 230
Query: 181 ADVWSCGVTLYVMLVGAYPFEDPE-DPKNFRKTIGRILSVHYSF--PDYVRVSLECKHLL 237
D+WS G+ Y++L G PF D D FR RIL+ Y F P + VSL K L+
Sbjct: 231 VDMWSVGIITYILLCGFEPFYDERGDQFMFR----RILNCEYYFISPWWDEVSLNAKDLV 286
Query: 238 SRIFVANSEKRITIPEIKNHPW 259
++ V + +KR+T + HPW
Sbjct: 287 RKLIVLDPKKRLTTFQALQHPW 308
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 157 bits (397), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 107/299 (35%), Positives = 149/299 (49%), Gaps = 49/299 (16%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID------------------ 42
+ +Y + +IG G++GV KL ++ A+K + + + I
Sbjct: 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPG 71
Query: 43 ---------EHVQREIMNHRSLKHPNIVRFKEVLLTPT--HLAIVMEYAAGGELFERICN 91
E V +EI + L HPN+V+ EVL P HL +V E G + E +
Sbjct: 72 GCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME-VPT 130
Query: 92 AGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLL--DGSTAPRVKICDFGYSK- 148
SED+ARF+FQ LI G+ Y H +I HRD+K N L+ DG +KI DFG S
Sbjct: 131 LKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDG----HIKIADFGVSNE 186
Query: 149 ---SSVLHSQPKSTVGTPAYIAPEVL--TKKEYDGKIADVWSCGVTLYVMLVGAYPFEDP 203
S L S +TVGTPA++APE L T+K + GK DVW+ GVTLY + G PF D
Sbjct: 187 FKGSDALLS---NTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMD- 242
Query: 204 EDPKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLR 262
+ +I S FPD ++ + K L++R+ N E RI +PEIK HPW R
Sbjct: 243 ---ERIMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVTR 298
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 147/267 (55%), Gaps = 14/267 (5%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQ----KIDEHVQREIMNHRSLK 56
+E +EI + +G G FG L R+K ++ +LA+K + + Q ++ ++RE+ L+
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 71
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HPNI+R T + +++EYA GE+++ + +F E + +L + +SYCHS
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHS 131
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
++ HRD+K EN LL +A +KI DFG+S + S+ GT Y+ PE++ + +
Sbjct: 132 KRVIHRDIKPENLLL--GSAGELKIADFGWSVHAP-SSRRXXLXGTLDYLPPEMIEGRMH 188
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
D K+ D+WS GV Y LVG PFE +++T RI V ++FPD+V + L
Sbjct: 189 DEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFVTEG--ARDL 241
Query: 237 LSRIFVANSEKRITIPEIKNHPWFLRN 263
+SR+ N +R + E+ HPW N
Sbjct: 242 ISRLLKHNPSQRPMLREVLEHPWITAN 268
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 156 bits (395), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/271 (35%), Positives = 140/271 (51%), Gaps = 14/271 (5%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFI--ERGQKIDEHVQREIMNHRSLKHPNIV 61
Y+ +G+G F L DK T++L+A+K I E + + ++ EI +KHPNIV
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 62 RFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICH 121
++ + HL ++M+ +GGELF+RI G ++E +A Q++ V Y H + I H
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVH 139
Query: 122 RDLKLENTL---LDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDG 178
RDLK EN L LD + ++ I DFG SK S + GTP Y+APEVL +K Y
Sbjct: 140 RDLKPENLLYYSLDEDS--KIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPY-S 196
Query: 179 KIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSF--PDYVRVSLECKHL 236
K D WS GV Y++L G PF D D K F +IL Y F P + +S K
Sbjct: 197 KAVDCWSIGVIAYILLCGYPPFYDENDAKLFE----QILKAEYEFDSPYWDDISDSAKDF 252
Query: 237 LSRIFVANSEKRITIPEIKNHPWFLRNLPIE 267
+ + + EKR T + HPW + ++
Sbjct: 253 IRHLMEKDPEKRFTCEQALQHPWIAGDTALD 283
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/271 (35%), Positives = 140/271 (51%), Gaps = 14/271 (5%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERG--QKIDEHVQREIMNHRSLKHPNIV 61
Y+ +G+G F L DK T++L+A+K I + + + ++ EI +KHPNIV
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 62 RFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICH 121
++ + HL ++M+ +GGELF+RI G ++E +A Q++ V Y H + I H
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVH 139
Query: 122 RDLKLENTL---LDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDG 178
RDLK EN L LD + ++ I DFG SK S + GTP Y+APEVL +K Y
Sbjct: 140 RDLKPENLLYYSLDEDS--KIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPY-S 196
Query: 179 KIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSF--PDYVRVSLECKHL 236
K D WS GV Y++L G PF D D K F +IL Y F P + +S K
Sbjct: 197 KAVDCWSIGVIAYILLCGYPPFYDENDAKLFE----QILKAEYEFDSPYWDDISDSAKDF 252
Query: 237 LSRIFVANSEKRITIPEIKNHPWFLRNLPIE 267
+ + + EKR T + HPW + ++
Sbjct: 253 IRHLMEKDPEKRFTCEQALQHPWIAGDTALD 283
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/271 (35%), Positives = 140/271 (51%), Gaps = 14/271 (5%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFI--ERGQKIDEHVQREIMNHRSLKHPNIV 61
Y+ +G+G F L DK T++L+A+K I E + + ++ EI +KHPNIV
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 62 RFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICH 121
++ + HL ++M+ +GGELF+RI G ++E +A Q++ V Y H + I H
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVH 139
Query: 122 RDLKLENTL---LDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDG 178
RDLK EN L LD + ++ I DFG SK S + GTP Y+APEVL +K Y
Sbjct: 140 RDLKPENLLYYSLDEDS--KIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPY-S 196
Query: 179 KIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSF--PDYVRVSLECKHL 236
K D WS GV Y++L G PF D D K F +IL Y F P + +S K
Sbjct: 197 KAVDCWSIGVIAYILLCGYPPFYDENDAKLFE----QILKAEYEFDSPYWDDISDSAKDF 252
Query: 237 LSRIFVANSEKRITIPEIKNHPWFLRNLPIE 267
+ + + EKR T + HPW + ++
Sbjct: 253 IRHLMEKDPEKRFTCEQALQHPWIAGDTALD 283
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/271 (35%), Positives = 140/271 (51%), Gaps = 14/271 (5%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFI--ERGQKIDEHVQREIMNHRSLKHPNIV 61
Y+ +G+G F L DK T++L+A+K I E + + ++ EI +KHPNIV
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 62 RFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICH 121
++ + HL ++M+ +GGELF+RI G ++E +A Q++ V Y H + I H
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVH 139
Query: 122 RDLKLENTL---LDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDG 178
RDLK EN L LD + ++ I DFG SK S + GTP Y+APEVL +K Y
Sbjct: 140 RDLKPENLLYYSLDEDS--KIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPY-S 196
Query: 179 KIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSF--PDYVRVSLECKHL 236
K D WS GV Y++L G PF D D K F +IL Y F P + +S K
Sbjct: 197 KAVDCWSIGVIAYILLCGYPPFYDENDAKLFE----QILKAEYEFDSPYWDDISDSAKDF 252
Query: 237 LSRIFVANSEKRITIPEIKNHPWFLRNLPIE 267
+ + + EKR T + HPW + ++
Sbjct: 253 IRHLMEKDPEKRFTCEQALQHPWIAGDTALD 283
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/267 (35%), Positives = 148/267 (55%), Gaps = 16/267 (5%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQK-------IDEHVQREIMNHRSLK 56
Y+I +++GSG F + K R+K T A KFI++ Q E ++RE+ R +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL 73
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HPNI+ +V T + +++E +GGELF+ + SE+EA F +Q++ GV+Y H+
Sbjct: 74 HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 117 MQICHRDLKLEN-TLLDGST-APRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKK 174
+I H DLK EN LLD + P +K+ DFG + + K+ GTP ++APE++
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVN-Y 192
Query: 175 EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPD--YVRVSLE 232
E G AD+WS GV Y++L GA PF D K ++T+ I +V Y F + + + S
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPFLG--DTK--QETLANITAVSYDFDEEFFSQTSEL 248
Query: 233 CKHLLSRIFVANSEKRITIPEIKNHPW 259
K + ++ V + KR+TI E HPW
Sbjct: 249 AKDFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 150/269 (55%), Gaps = 16/269 (5%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID-------EHVQREIMNHRS 54
+ YE+ +++GSG F + + R K T + A KFI++ + E ++RE+ R
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 64
Query: 55 LKHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYC 114
++HPNI+ ++ T + +++E +GGELF+ + +EDEA F +Q++ GV Y
Sbjct: 65 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYL 124
Query: 115 HSMQICHRDLKLEN-TLLDGST-APRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLT 172
HS +I H DLK EN LLD + PR+K+ DFG + ++ K+ GTP ++APE++
Sbjct: 125 HSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVN 184
Query: 173 KKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPD--YVRVS 230
+ G AD+WS GV Y++L GA PF + ++T+ I +V+Y F + + S
Sbjct: 185 YEPL-GLEADMWSIGVITYILLSGASPFLG----ETKQETLTNISAVNYDFDEEYFSNTS 239
Query: 231 LECKHLLSRIFVANSEKRITIPEIKNHPW 259
K + R+ V + ++R+TI + H W
Sbjct: 240 ELAKDFIRRLLVKDPKRRMTIAQSLEHSW 268
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 150/267 (56%), Gaps = 14/267 (5%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQ----KIDEHVQREIMNHRSLK 56
+E ++I + +G G FG L R++ ++ +LA+K + + Q ++ ++RE+ L+
Sbjct: 11 LEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HPNI+R T + +++EYA G ++ + RF E + +L + +SYCHS
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHS 130
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
++ HRD+K EN LL GS +KI DFG+S + S+ + GT Y+ PE++ + +
Sbjct: 131 KRVIHRDIKPENLLL-GSNG-ELKIADFGWSVHAP-SSRRDTLCGTLDYLPPEMIEGRMH 187
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
D K+ D+WS GV Y LVG PFE +++T RI V ++FPD+ V+ + L
Sbjct: 188 DEKV-DLWSLGVLCYEFLVGMPPFE----AHTYQETYRRISRVEFTFPDF--VTEGARDL 240
Query: 237 LSRIFVANSEKRITIPEIKNHPWFLRN 263
+SR+ N+ +R+T+ E+ HPW N
Sbjct: 241 ISRLLKHNASQRLTLAEVLEHPWIKAN 267
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 150/267 (56%), Gaps = 14/267 (5%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQ----KIDEHVQREIMNHRSLK 56
+E ++I + +G G FG L R++ ++ +LA+K + + Q ++ ++RE+ L+
Sbjct: 11 LEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HPNI+R T + +++EYA G ++ + RF E + +L + +SYCHS
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHS 130
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
++ HRD+K EN LL GS +KI DFG+S + S+ + GT Y+ PE++ + +
Sbjct: 131 KRVIHRDIKPENLLL-GSNG-ELKIADFGWSVHAP-SSRRTTLCGTLDYLPPEMIEGRMH 187
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
D K+ D+WS GV Y LVG PFE +++T RI V ++FPD+ V+ + L
Sbjct: 188 DEKV-DLWSLGVLCYEFLVGMPPFE----AHTYQETYRRISRVEFTFPDF--VTEGARDL 240
Query: 237 LSRIFVANSEKRITIPEIKNHPWFLRN 263
+SR+ N+ +R+T+ E+ HPW N
Sbjct: 241 ISRLLKHNASQRLTLAEVLEHPWIKAN 267
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 154 bits (390), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 146/267 (54%), Gaps = 14/267 (5%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQ----KIDEHVQREIMNHRSLK 56
+E +EI + +G G FG L R+K ++ +LA+K + + Q ++ ++RE+ L+
Sbjct: 33 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 92
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HPNI+R T + +++EYA G ++ + +F E + +L + +SYCHS
Sbjct: 93 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 152
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
++ HRD+K EN LL +A +KI DFG+S + S+ + GT Y+ PE++ + +
Sbjct: 153 KRVIHRDIKPENLLL--GSAGELKIADFGWSVHAP-SSRRTTLCGTLDYLPPEMIEGRMH 209
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
D K+ D+WS GV Y LVG PFE +++T RI V ++FPD+V + L
Sbjct: 210 DEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFVTEG--ARDL 262
Query: 237 LSRIFVANSEKRITIPEIKNHPWFLRN 263
+SR+ N +R + E+ HPW N
Sbjct: 263 ISRLLKHNPSQRPMLREVLEHPWITAN 289
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 154 bits (390), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 147/267 (55%), Gaps = 14/267 (5%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQ----KIDEHVQREIMNHRSLK 56
+E +EI + +G G FG L R+K ++ +LA+K + + Q ++ ++RE+ L+
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HPNI+R T + +++EYA G ++ + +F E + +L + +SYCHS
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
++ HRD+K EN LL +A +KI DFG+S + S+ + GT Y+ PE++ + +
Sbjct: 127 KRVIHRDIKPENLLL--GSAGELKIADFGWSVHAP-SSRRTTLCGTLDYLPPEMIEGRMH 183
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
D K+ D+WS GV Y LVG PFE +++T RI V ++FPD+ V+ + L
Sbjct: 184 DEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDF--VTEGARDL 236
Query: 237 LSRIFVANSEKRITIPEIKNHPWFLRN 263
+SR+ N +R + E+ HPW N
Sbjct: 237 ISRLLKHNPSQRPMLREVLEHPWITAN 263
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 154 bits (390), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 147/267 (55%), Gaps = 14/267 (5%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQ----KIDEHVQREIMNHRSLK 56
+E +EI + +G G FG L R+K ++ +LA+K + + Q ++ ++RE+ L+
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HPNI+R T + +++EYA G ++ + +F E + +L + +SYCHS
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
++ HRD+K EN LL +A +KI DFG+S + S+ + GT Y+ PE++ + +
Sbjct: 130 KRVIHRDIKPENLLL--GSAGELKIADFGWSVHAP-SSRRAALCGTLDYLPPEMIEGRMH 186
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
D K+ D+WS GV Y LVG PFE +++T RI V ++FPD+ V+ + L
Sbjct: 187 DEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDF--VTEGARDL 239
Query: 237 LSRIFVANSEKRITIPEIKNHPWFLRN 263
+SR+ N +R + E+ HPW N
Sbjct: 240 ISRLLKHNPSQRPMLREVLEHPWITAN 266
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 154 bits (390), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 147/267 (55%), Gaps = 14/267 (5%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQ----KIDEHVQREIMNHRSLK 56
+E +EI + +G G FG L R+K ++ +LA+K + + Q ++ ++RE+ L+
Sbjct: 11 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 70
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HPNI+R T + +++EYA G ++ + +F E + +L + +SYCHS
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 130
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
++ HRD+K EN LL +A +KI DFG+S + S+ + GT Y+ PE++ + +
Sbjct: 131 KRVIHRDIKPENLLL--GSAGELKIADFGWSVHAP-SSRRTTLCGTLDYLPPEMIEGRMH 187
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
D K+ D+WS GV Y LVG PFE +++T RI V ++FPD+ V+ + L
Sbjct: 188 DEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDF--VTEGARDL 240
Query: 237 LSRIFVANSEKRITIPEIKNHPWFLRN 263
+SR+ N +R + E+ HPW N
Sbjct: 241 ISRLLKHNPSQRPMLREVLEHPWITAN 267
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 154 bits (390), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 88/269 (32%), Positives = 149/269 (55%), Gaps = 16/269 (5%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID-------EHVQREIMNHRS 54
+ YE+ +++GSG F + + R K T + A KFI++ + E ++RE+ R
Sbjct: 26 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILRE 85
Query: 55 LKHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYC 114
++HPNI+ ++ T + +++E +GGELF+ + +EDEA F +Q++ GV Y
Sbjct: 86 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYL 145
Query: 115 HSMQICHRDLKLEN-TLLDGST-APRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLT 172
HS +I H DLK EN LLD + PR+K+ DFG + ++ K+ GTP ++APE++
Sbjct: 146 HSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVN 205
Query: 173 KKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPD--YVRVS 230
+ G AD+WS GV Y++L GA PF + ++T+ I +V+Y F + + S
Sbjct: 206 YEPL-GLEADMWSIGVITYILLSGASPFL----GETKQETLTNISAVNYDFDEEYFSNTS 260
Query: 231 LECKHLLSRIFVANSEKRITIPEIKNHPW 259
K + R+ V + ++R+ I + H W
Sbjct: 261 ELAKDFIRRLLVKDPKRRMXIAQSLEHSW 289
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 154 bits (389), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 147/267 (55%), Gaps = 14/267 (5%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQ----KIDEHVQREIMNHRSLK 56
+E +EI + +G G FG L R+K ++ +LA+K + + Q ++ ++RE+ L+
Sbjct: 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 67
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HPNI+R T + +++EYA G ++ + +F E + +L + +SYCHS
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 127
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
++ HRD+K EN LL +A +KI DFG+S + S+ + GT Y+ PE++ + +
Sbjct: 128 KRVIHRDIKPENLLL--GSAGELKIADFGWSVHAP-SSRRDTLCGTLDYLPPEMIEGRMH 184
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
D K+ D+WS GV Y LVG PFE +++T RI V ++FPD+ V+ + L
Sbjct: 185 DEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDF--VTEGARDL 237
Query: 237 LSRIFVANSEKRITIPEIKNHPWFLRN 263
+SR+ N +R + E+ HPW N
Sbjct: 238 ISRLLKHNPSQRPMLREVLEHPWITAN 264
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 154 bits (389), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 147/267 (55%), Gaps = 14/267 (5%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQ----KIDEHVQREIMNHRSLK 56
+E +EI + +G G FG L R+K ++ +LA+K + + Q ++ ++RE+ L+
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 71
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HPNI+R T + +++EYA G ++ + +F E + +L + +SYCHS
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 131
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
++ HRD+K EN LL +A +KI DFG+S + S+ + GT Y+ PE++ + +
Sbjct: 132 KRVIHRDIKPENLLL--GSAGELKIADFGWSVHAP-SSRRTTLCGTLDYLPPEMIEGRMH 188
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
D K+ D+WS GV Y LVG PFE +++T RI V ++FPD+ V+ + L
Sbjct: 189 DEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDF--VTEGARDL 241
Query: 237 LSRIFVANSEKRITIPEIKNHPWFLRN 263
+SR+ N +R + E+ HPW N
Sbjct: 242 ISRLLKHNPSQRPMLREVLEHPWITAN 268
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 154 bits (389), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 147/267 (55%), Gaps = 14/267 (5%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQ----KIDEHVQREIMNHRSLK 56
+E +EI + +G G FG L R+K ++ +LA+K + + Q ++ ++RE+ L+
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HPNI+R T + +++EYA G ++ + +F E + +L + +SYCHS
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
++ HRD+K EN LL +A +KI DFG+S + S+ + GT Y+ PE++ + +
Sbjct: 130 KRVIHRDIKPENLLL--GSAGELKIADFGWSVHAP-SSRRTTLCGTLDYLPPEMIEGRMH 186
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
D K+ D+WS GV Y LVG PFE +++T RI V ++FPD+ V+ + L
Sbjct: 187 DEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDF--VTEGARDL 239
Query: 237 LSRIFVANSEKRITIPEIKNHPWFLRN 263
+SR+ N +R + E+ HPW N
Sbjct: 240 ISRLLKHNPSQRPMLREVLEHPWITAN 266
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 154 bits (389), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 146/267 (54%), Gaps = 14/267 (5%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQ----KIDEHVQREIMNHRSLK 56
+E +EI + +G G FG L R+K ++ +LA+K + + Q ++ ++RE+ L+
Sbjct: 24 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 83
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HPNI+R T + +++EYA G ++ + +F E + +L + +SYCHS
Sbjct: 84 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 143
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
++ HRD+K EN LL +A +KI DFG+S + S+ + GT Y+ PE++ + +
Sbjct: 144 KRVIHRDIKPENLLL--GSAGELKIADFGWSVHAP-SSRRTTLCGTLDYLPPEMIEGRMH 200
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
D K+ D+WS GV Y LVG PFE +++T RI V ++FPD+V + L
Sbjct: 201 DEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFVTEG--ARDL 253
Query: 237 LSRIFVANSEKRITIPEIKNHPWFLRN 263
+SR+ N +R + E+ HPW N
Sbjct: 254 ISRLLKHNPSQRPMLREVLEHPWITAN 280
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 154 bits (389), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 145/267 (54%), Gaps = 14/267 (5%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQ----KIDEHVQREIMNHRSLK 56
+E +EI + +G G FG L R+K ++ +LA+K + + Q ++ ++RE+ L+
Sbjct: 33 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 92
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HPNI+R T + +++EYA G ++ + +F E + +L + +SYCHS
Sbjct: 93 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 152
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
++ HRD+K EN LL +A +KI DFG+S + S+ GT Y+ PE++ + +
Sbjct: 153 KRVIHRDIKPENLLL--GSAGELKIADFGWSVHAP-SSRRDDLCGTLDYLPPEMIEGRMH 209
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
D K+ D+WS GV Y LVG PFE +++T RI V ++FPD+V + L
Sbjct: 210 DEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFVTEG--ARDL 262
Query: 237 LSRIFVANSEKRITIPEIKNHPWFLRN 263
+SR+ N +R + E+ HPW N
Sbjct: 263 ISRLLKHNPSQRPMLREVLEHPWITAN 289
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 154 bits (389), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 147/267 (55%), Gaps = 14/267 (5%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQ----KIDEHVQREIMNHRSLK 56
+E +EI + +G G FG L R+K ++ +LA+K + + Q ++ ++RE+ L+
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HPNI+R T + +++EYA G ++ + +F E + +L + +SYCHS
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
++ HRD+K EN LL +A +KI DFG+S + S+ + GT Y+ PE++ + +
Sbjct: 127 KRVIHRDIKPENLLL--GSAGELKIADFGWSVHAP-SSRRAALCGTLDYLPPEMIEGRMH 183
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
D K+ D+WS GV Y LVG PFE +++T RI V ++FPD+ V+ + L
Sbjct: 184 DEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDF--VTEGARDL 236
Query: 237 LSRIFVANSEKRITIPEIKNHPWFLRN 263
+SR+ N +R + E+ HPW N
Sbjct: 237 ISRLLKHNPSQRPMLREVLEHPWITAN 263
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 154 bits (389), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 147/267 (55%), Gaps = 14/267 (5%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQ----KIDEHVQREIMNHRSLK 56
+E +EI + +G G FG L R+K ++ +LA+K + + Q ++ ++RE+ L+
Sbjct: 6 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 65
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HPNI+R T + +++EYA G ++ + +F E + +L + +SYCHS
Sbjct: 66 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 125
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
++ HRD+K EN LL +A +KI DFG+S + S+ + GT Y+ PE++ + +
Sbjct: 126 KRVIHRDIKPENLLL--GSAGELKIADFGWSVHAP-SSRRTTLCGTLDYLPPEMIEGRMH 182
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
D K+ D+WS GV Y LVG PFE +++T RI V ++FPD+ V+ + L
Sbjct: 183 DEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDF--VTEGARDL 235
Query: 237 LSRIFVANSEKRITIPEIKNHPWFLRN 263
+SR+ N +R + E+ HPW N
Sbjct: 236 ISRLLKHNPSQRPMLREVLEHPWITAN 262
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 154 bits (389), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 147/267 (55%), Gaps = 14/267 (5%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQ----KIDEHVQREIMNHRSLK 56
+E +EI + +G G FG L R+K ++ +LA+K + + Q ++ ++RE+ L+
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HPNI+R T + +++EYA G ++ + +F E + +L + +SYCHS
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
++ HRD+K EN LL +A +KI DFG+S + S+ + GT Y+ PE++ + +
Sbjct: 130 KRVIHRDIKPENLLL--GSAGELKIADFGWSVHAP-SSRRTTLCGTLDYLPPEMIEGRMH 186
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
D K+ D+WS GV Y LVG PFE +++T RI V ++FPD+ V+ + L
Sbjct: 187 DEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDF--VTEGARDL 239
Query: 237 LSRIFVANSEKRITIPEIKNHPWFLRN 263
+SR+ N +R + E+ HPW N
Sbjct: 240 ISRLLKHNPSQRPMLREVLEHPWITAN 266
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 154 bits (388), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 145/267 (54%), Gaps = 14/267 (5%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQ----KIDEHVQREIMNHRSLK 56
+E +EI + +G G FG L R+K ++ +LA+K + + Q ++ ++RE+ L+
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HPNI+R T + +++EYA G ++ + +F E + +L + +SYCHS
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
++ HRD+K EN LL +A +KI DFG+S + S+ GT Y+ PE++ + +
Sbjct: 130 KRVIHRDIKPENLLL--GSAGELKIADFGWSVHAP-SSRRDDLCGTLDYLPPEMIEGRMH 186
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
D K+ D+WS GV Y LVG PFE +++T RI V ++FPD+V + L
Sbjct: 187 DEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFVTEG--ARDL 239
Query: 237 LSRIFVANSEKRITIPEIKNHPWFLRN 263
+SR+ N +R + E+ HPW N
Sbjct: 240 ISRLLKHNPSQRPMLREVLEHPWITAN 266
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 154 bits (388), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 145/267 (54%), Gaps = 14/267 (5%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQ----KIDEHVQREIMNHRSLK 56
+E +EI + +G G FG L R+K ++ +LA+K + + Q ++ ++RE+ L+
Sbjct: 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 67
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HPNI+R T + +++EYA G ++ + +F E + +L + +SYCHS
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 127
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
++ HRD+K EN LL +A +KI DFG+S S+ + GT Y+ PE++ + +
Sbjct: 128 KRVIHRDIKPENLLL--GSAGELKIADFGWS-CHAPSSRRTTLSGTLDYLPPEMIEGRMH 184
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
D K+ D+WS GV Y LVG PFE +++T RI V ++FPD+V + L
Sbjct: 185 DEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFVTEG--ARDL 237
Query: 237 LSRIFVANSEKRITIPEIKNHPWFLRN 263
+SR+ N +R + E+ HPW N
Sbjct: 238 ISRLLKHNPSQRPMLREVLEHPWITAN 264
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 154 bits (388), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 145/267 (54%), Gaps = 14/267 (5%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQ----KIDEHVQREIMNHRSLK 56
+E +EI + +G G FG L R+K ++ +LA+K + + Q ++ ++RE+ L+
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 71
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HPNI+R T + +++EYA G ++ + +F E + +L + +SYCHS
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 131
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
++ HRD+K EN LL +A +KI DFG+S + S+ + GT Y+ PE + + +
Sbjct: 132 KRVIHRDIKPENLLL--GSAGELKIADFGWSVHAP-SSRRTTLCGTLDYLPPEXIEGRXH 188
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
D K+ D+WS GV Y LVG PFE +++T RI V ++FPD+V + L
Sbjct: 189 DEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFVTEG--ARDL 241
Query: 237 LSRIFVANSEKRITIPEIKNHPWFLRN 263
+SR+ N +R + E+ HPW N
Sbjct: 242 ISRLLKHNPSQRPXLREVLEHPWITAN 268
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 154 bits (388), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 145/267 (54%), Gaps = 14/267 (5%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQ----KIDEHVQREIMNHRSLK 56
+E +EI + +G G FG L R+K ++ +LA+K + + Q ++ ++RE+ L+
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HPNI+R T + +++EYA G ++ + +F E + +L + +SYCHS
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
++ HRD+K EN LL +A +KI DFG+S + S+ GT Y+ PE++ + +
Sbjct: 127 KRVIHRDIKPENLLL--GSAGELKIADFGWSVHAP-SSRRTELCGTLDYLPPEMIEGRMH 183
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
D K+ D+WS GV Y LVG PFE +++T RI V ++FPD+V + L
Sbjct: 184 DEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFVTEG--ARDL 236
Query: 237 LSRIFVANSEKRITIPEIKNHPWFLRN 263
+SR+ N +R + E+ HPW N
Sbjct: 237 ISRLLKHNPSQRPMLREVLEHPWITAN 263
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 154 bits (388), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 145/267 (54%), Gaps = 14/267 (5%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQ----KIDEHVQREIMNHRSLK 56
+E +EI + +G G FG L R+K ++ +LA+K + + Q ++ ++RE+ L+
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HPNI+R T + +++EYA G ++ + +F E + +L + +SYCHS
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
++ HRD+K EN LL +A +KI DFG+S + S+ GT Y+ PE++ + +
Sbjct: 127 KRVIHRDIKPENLLL--GSAGELKIADFGWSVHAP-SSRRTDLCGTLDYLPPEMIEGRMH 183
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
D K+ D+WS GV Y LVG PFE +++T RI V ++FPD+V + L
Sbjct: 184 DEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFVTEG--ARDL 236
Query: 237 LSRIFVANSEKRITIPEIKNHPWFLRN 263
+SR+ N +R + E+ HPW N
Sbjct: 237 ISRLLKHNPSQRPMLREVLEHPWITAN 263
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 154 bits (388), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 146/267 (54%), Gaps = 14/267 (5%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQ----KIDEHVQREIMNHRSLK 56
+E +EI + +G G FG L R+K ++ +LA+K + + Q ++ ++RE+ L+
Sbjct: 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 67
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HPNI+R T + +++EYA G ++ + +F E + +L + +SYCHS
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 127
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
++ HRD+K EN LL +A +KI DFG+S + S+ GT Y+ PE++ + +
Sbjct: 128 KRVIHRDIKPENLLL--GSAGELKIADFGWSVHAP-SSRRTDLCGTLDYLPPEMIEGRMH 184
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
D K+ D+WS GV Y LVG PFE +++T RI V ++FPD+ V+ + L
Sbjct: 185 DEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDF--VTEGARDL 237
Query: 237 LSRIFVANSEKRITIPEIKNHPWFLRN 263
+SR+ N +R + E+ HPW N
Sbjct: 238 ISRLLKHNPSQRPMLREVLEHPWITAN 264
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/269 (32%), Positives = 149/269 (55%), Gaps = 16/269 (5%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID-------EHVQREIMNHRS 54
+ YE+ +++GSG F + + R K T + A KFI++ + E ++RE+ R
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 71
Query: 55 LKHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYC 114
++HPNI+ ++ T + +++E +GGELF+ + +EDEA F +Q++ GV Y
Sbjct: 72 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYL 131
Query: 115 HSMQICHRDLKLEN-TLLDGST-APRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLT 172
HS +I H DLK EN LLD + PR+K+ DFG + ++ K+ GTP ++APE++
Sbjct: 132 HSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVN 191
Query: 173 KKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPD--YVRVS 230
+ G AD+WS GV Y++L GA PF + ++T+ I +V+Y F + + S
Sbjct: 192 YEPL-GLEADMWSIGVITYILLSGASPFLG----ETKQETLTNISAVNYDFDEEYFSNTS 246
Query: 231 LECKHLLSRIFVANSEKRITIPEIKNHPW 259
K + R+ V + ++R+ I + H W
Sbjct: 247 ELAKDFIRRLLVKDPKRRMXIAQSLEHSW 275
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 146/267 (54%), Gaps = 14/267 (5%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQ----KIDEHVQREIMNHRSLK 56
+E +EI + +G G FG L R+K ++ +LA+K + + Q ++ ++RE+ L+
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HPNI+R T + +++EYA G ++ + +F E + +L + +SYCHS
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
++ HRD+K EN LL +A +KI DFG+S + S+ GT Y+ PE++ + +
Sbjct: 127 KRVIHRDIKPENLLL--GSAGELKIADFGWSVHAP-SSRRTDLCGTLDYLPPEMIEGRMH 183
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
D K+ D+WS GV Y LVG PFE +++T RI V ++FPD+ V+ + L
Sbjct: 184 DEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDF--VTEGARDL 236
Query: 237 LSRIFVANSEKRITIPEIKNHPWFLRN 263
+SR+ N +R + E+ HPW N
Sbjct: 237 ISRLLKHNPSQRPMLREVLEHPWITAN 263
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 146/267 (54%), Gaps = 14/267 (5%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQ----KIDEHVQREIMNHRSLK 56
+E +EI + +G G FG L R+K ++ +LA+K + + Q ++ ++RE+ L+
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HPNI+R T + +++EYA G ++ + +F E + +L + +SYCHS
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
++ HRD+K EN LL +A +KI DFG+S + S+ GT Y+ PE++ + +
Sbjct: 127 KRVIHRDIKPENLLL--GSAGELKIADFGWSVHAP-SSRRTXLCGTLDYLPPEMIEGRMH 183
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
D K+ D+WS GV Y LVG PFE +++T RI V ++FPD+ V+ + L
Sbjct: 184 DEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDF--VTEGARDL 236
Query: 237 LSRIFVANSEKRITIPEIKNHPWFLRN 263
+SR+ N +R + E+ HPW N
Sbjct: 237 ISRLLKHNPSQRPMLREVLEHPWITAN 263
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 146/267 (54%), Gaps = 14/267 (5%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQ----KIDEHVQREIMNHRSLK 56
+E +EI + +G G FG L R+K ++ +LA+K + + Q ++ ++RE+ L+
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 71
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HPNI+R T + +++EYA G ++ + +F E + +L + +SYCHS
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 131
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
++ HRD+K EN LL +A +KI DFG+S + S+ GT Y+ PE++ + +
Sbjct: 132 KRVIHRDIKPENLLL--GSAGELKIADFGWSVHAP-SSRRTDLCGTLDYLPPEMIEGRMH 188
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
D K+ D+WS GV Y LVG PFE +++T RI V ++FPD+ V+ + L
Sbjct: 189 DEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDF--VTEGARDL 241
Query: 237 LSRIFVANSEKRITIPEIKNHPWFLRN 263
+SR+ N +R + E+ HPW N
Sbjct: 242 ISRLLKHNPSQRPMLREVLEHPWITAN 268
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 141/264 (53%), Gaps = 12/264 (4%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIER---GQKIDEHVQREIMNHRSLKHP 58
E Y+ VK +GSG +G L RDK T A+K I + + + E+ + L HP
Sbjct: 37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHP 96
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQ 118
NI++ + + +VME GGELF+ I + +F+E +A +Q++SGV+Y H
Sbjct: 97 NIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHN 156
Query: 119 ICHRDLKLENTLLDGSTAPR-VKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYD 177
I HRDLK EN LL+ +KI DFG S + K +GT YIAPEVL KK YD
Sbjct: 157 IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRKK-YD 215
Query: 178 GKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSF--PDYVRVSLECKH 235
K DVWS GV L+++L G PF D + RK + Y+F P++ VS K
Sbjct: 216 EK-CDVWSIGVILFILLAGYPPFGGQTDQEILRK----VEKGKYTFDSPEWKNVSEGAKD 270
Query: 236 LLSRIFVANSEKRITIPEIKNHPW 259
L+ ++ +S++RI+ + HPW
Sbjct: 271 LIKQMLQFDSQRRISAQQALEHPW 294
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 146/267 (54%), Gaps = 14/267 (5%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQ----KIDEHVQREIMNHRSLK 56
+E +EI + +G G FG L R+K ++ +LA+K + + Q ++ ++RE+ L+
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HPNI+R T + +++EYA G ++ + +F E + +L + +SYCHS
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
++ HRD+K EN LL +A +KI DFG+S + S+ GT Y+ PE++ + +
Sbjct: 127 KRVIHRDIKPENLLL--GSAGELKIADFGWSVHAP-SSRRXXLCGTLDYLPPEMIEGRMH 183
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
D K+ D+WS GV Y LVG PFE +++T RI V ++FPD+ V+ + L
Sbjct: 184 DEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDF--VTEGARDL 236
Query: 237 LSRIFVANSEKRITIPEIKNHPWFLRN 263
+SR+ N +R + E+ HPW N
Sbjct: 237 ISRLLKHNPSQRPMLREVLEHPWITAN 263
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 146/267 (54%), Gaps = 14/267 (5%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQ----KIDEHVQREIMNHRSLK 56
+E +EI + +G G FG L R+K ++ +LA+K + + Q ++ ++RE+ L+
Sbjct: 9 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 68
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HPNI+R T + +++EYA G ++ + +F E + +L + +SYCHS
Sbjct: 69 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 128
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
++ HRD+K EN LL +A +KI DFG+S + S+ GT Y+ PE++ + +
Sbjct: 129 KRVIHRDIKPENLLL--GSAGELKIADFGWSVHAP-SSRRXXLCGTLDYLPPEMIEGRMH 185
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
D K+ D+WS GV Y LVG PFE +++T RI V ++FPD+ V+ + L
Sbjct: 186 DEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDF--VTEGARDL 238
Query: 237 LSRIFVANSEKRITIPEIKNHPWFLRN 263
+SR+ N +R + E+ HPW N
Sbjct: 239 ISRLLKHNPSQRPMLREVLEHPWITAN 265
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 146/267 (54%), Gaps = 14/267 (5%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQ----KIDEHVQREIMNHRSLK 56
+E +EI + +G G FG L R+K ++ +LA+K + + Q ++ ++RE+ L+
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HPNI+R T + +++EYA G ++ + +F E + +L + +SYCHS
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
++ HRD+K EN LL +A +KI DFG+S + S+ GT Y+ PE++ + +
Sbjct: 130 KRVIHRDIKPENLLL--GSAGELKIADFGWSVHAP-SSRRXXLCGTLDYLPPEMIEGRMH 186
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
D K+ D+WS GV Y LVG PFE +++T RI V ++FPD+ V+ + L
Sbjct: 187 DEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDF--VTEGARDL 239
Query: 237 LSRIFVANSEKRITIPEIKNHPWFLRN 263
+SR+ N +R + E+ HPW N
Sbjct: 240 ISRLLKHNPSQRPMLREVLEHPWITAN 266
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/273 (35%), Positives = 139/273 (50%), Gaps = 19/273 (6%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQ--------------KIDEHVQR 47
E Y V+ +GSG +G L ++K A+K I++ Q K E +
Sbjct: 36 ESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYN 95
Query: 48 EIMNHRSLKHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQL 107
EI +SL HPNI++ +V + +V E+ GGELFE+I N +F E +A +Q+
Sbjct: 96 EISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQI 155
Query: 108 ISGVSYCHSMQICHRDLKLENTLLDGSTA-PRVKICDFGYSKSSVLHSQPKSTVGTPAYI 166
+SG+ Y H I HRD+K EN LL+ + +KI DFG S + + +GT YI
Sbjct: 156 LSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYI 215
Query: 167 APEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDY 226
APEVL KK+Y+ K DVWSCGV +Y++L G PF D +K ++ F D+
Sbjct: 216 APEVL-KKKYNEK-CDVWSCGVIMYILLCGYPPFGGQNDQDIIKKV--EKGKYYFDFNDW 271
Query: 227 VRVSLECKHLLSRIFVANSEKRITIPEIKNHPW 259
+S E K L+ + + KR T E N W
Sbjct: 272 KNISDEAKELIKLMLTYDYNKRCTAEEALNSRW 304
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 146/267 (54%), Gaps = 14/267 (5%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQ----KIDEHVQREIMNHRSLK 56
+E +EI + +G G FG L R+K + +LA+K + + Q ++ ++RE+ L+
Sbjct: 4 LEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 63
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HPNI+R T + +++EYA G ++ + +F E + +L + +SYCHS
Sbjct: 64 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 123
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
++ HRD+K EN LL +A +KI DFG+S + S+ + GT Y+ PE++ + +
Sbjct: 124 KRVIHRDIKPENLLL--GSAGELKIADFGWSVHAP-SSRRTTLCGTLDYLPPEMIEGRMH 180
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
D K+ D+WS GV Y LVG PFE +++T RI V ++FPD+ V+ + L
Sbjct: 181 DEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDF--VTEGARDL 233
Query: 237 LSRIFVANSEKRITIPEIKNHPWFLRN 263
+SR+ N +R + E+ HPW N
Sbjct: 234 ISRLLKHNPSQRPMLREVLEHPWITAN 260
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 153 bits (386), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 146/267 (54%), Gaps = 14/267 (5%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQ----KIDEHVQREIMNHRSLK 56
+E +EI + +G G FG L R+K ++ +LA+K + + Q ++ ++RE+ L+
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HPNI+R T + +++EYA G ++ + +F E + +L + +SYCHS
Sbjct: 67 HPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
++ HRD+K EN LL +A +KI DFG+S + S+ + GT Y+ PE++ + +
Sbjct: 127 KKVIHRDIKPENLLL--GSAGELKIADFGWSVHAP-SSRRAALCGTLDYLPPEMIEGRMH 183
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
D K+ D+WS GV Y LVG PFE ++ T RI V ++FPD+ V+ + L
Sbjct: 184 DEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQDTYKRISRVEFTFPDF--VTEGARDL 236
Query: 237 LSRIFVANSEKRITIPEIKNHPWFLRN 263
+SR+ N +R + E+ HPW N
Sbjct: 237 ISRLLKHNPSQRPMLREVLEHPWITAN 263
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 152 bits (384), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 147/267 (55%), Gaps = 14/267 (5%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQ----KIDEHVQREIMNHRSLK 56
+E +EI + +G G FG L R+K ++ +LA+K + + Q ++ ++RE+ L+
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HPNI+R T + +++EYA G ++ + +F E + +L + +SYCHS
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
++ HRD+K EN LL +A +KI +FG+S + S+ + GT Y+ PE++ + +
Sbjct: 130 KRVIHRDIKPENLLL--GSAGELKIANFGWSVHAP-SSRRTTLCGTLDYLPPEMIEGRMH 186
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
D K+ D+WS GV Y LVG PFE +++T RI V ++FPD+ V+ + L
Sbjct: 187 DEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDF--VTEGARDL 239
Query: 237 LSRIFVANSEKRITIPEIKNHPWFLRN 263
+SR+ N +R + E+ HPW N
Sbjct: 240 ISRLLKHNPSQRPMLREVLEHPWITAN 266
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 152 bits (384), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 146/267 (54%), Gaps = 14/267 (5%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQ----KIDEHVQREIMNHRSLK 56
+E +EI + +G G FG L R+K ++ +LA+K + + Q ++ ++RE+ L+
Sbjct: 9 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 68
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HPNI+R T + +++EYA G ++ + +F E + +L + +SYCHS
Sbjct: 69 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 128
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
++ HRD+K EN LL +A +KI +FG+S + S+ + GT Y+ PE++ + +
Sbjct: 129 KRVIHRDIKPENLLL--GSAGELKIANFGWSVHAP-SSRRTTLCGTLDYLPPEMIEGRMH 185
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
D K+ D+WS GV Y LVG PFE +++T RI V ++FPD+V + L
Sbjct: 186 DEKV-DLWSLGVLCYEFLVGKPPFE----ANTYQETYKRISRVEFTFPDFVTEG--ARDL 238
Query: 237 LSRIFVANSEKRITIPEIKNHPWFLRN 263
+SR+ N +R + E+ HPW N
Sbjct: 239 ISRLLKHNPSQRPMLREVLEHPWITAN 265
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 93/267 (34%), Positives = 146/267 (54%), Gaps = 16/267 (5%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQK-------IDEHVQREIMNHRSLK 56
Y+I +++GSG F + K R+K T A KFI++ Q E ++RE+ R +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
H N++ +V T + +++E +GGELF+ + SE+EA F +Q++ GV+Y H+
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 117 MQICHRDLKLEN-TLLDGST-APRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKK 174
+I H DLK EN LLD + P +K+ DFG + + K+ GTP ++APE++ +
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE 193
Query: 175 EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPD--YVRVSLE 232
G AD+WS GV Y++L GA PF D K ++T+ I SV Y F + + S
Sbjct: 194 PL-GLEADMWSIGVITYILLSGASPFLG--DTK--QETLANITSVSYDFDEEFFSHTSEL 248
Query: 233 CKHLLSRIFVANSEKRITIPEIKNHPW 259
K + ++ V + KR+TI E HPW
Sbjct: 249 AKDFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 152 bits (383), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 93/267 (34%), Positives = 146/267 (54%), Gaps = 16/267 (5%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQK-------IDEHVQREIMNHRSLK 56
Y+I +++GSG F + K R+K T A KFI++ Q E ++RE+ R +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
H N++ +V T + +++E +GGELF+ + SE+EA F +Q++ GV+Y H+
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 117 MQICHRDLKLEN-TLLDGST-APRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKK 174
+I H DLK EN LLD + P +K+ DFG + + K+ GTP ++APE++ +
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE 193
Query: 175 EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPD--YVRVSLE 232
G AD+WS GV Y++L GA PF D K ++T+ I SV Y F + + S
Sbjct: 194 PL-GLEADMWSIGVITYILLSGASPFLG--DTK--QETLANITSVSYDFDEEFFSHTSEL 248
Query: 233 CKHLLSRIFVANSEKRITIPEIKNHPW 259
K + ++ V + KR+TI E HPW
Sbjct: 249 AKDFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 152 bits (383), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/269 (33%), Positives = 147/269 (54%), Gaps = 10/269 (3%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID--EHVQREIMNHRSLKHP 58
+E +++V+ +G G +G +L ++ T E +AVK ++ + +D E++++EI ++ L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQ 118
N+V+F + +EY +GGELF+RI E +A+ FF QL++GV Y H +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPK---STVGTPAYIAPEVLTKKE 175
I HRD+K EN LLD +KI DFG + +++ + GT Y+APE+L ++E
Sbjct: 125 ITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 176 YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKH 235
+ + DVWSCG+ L ML G P++ P D + Y P + ++
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWKEKKT--YLNP-WKKIDSAPLA 239
Query: 236 LLSRIFVANSEKRITIPEIKNHPWFLRNL 264
LL +I V N RITIP+IK W+ + L
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWYNKPL 268
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 152 bits (383), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 93/267 (34%), Positives = 146/267 (54%), Gaps = 16/267 (5%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQK-------IDEHVQREIMNHRSLK 56
Y+I +++GSG F + K R+K T A KFI++ Q E ++RE+ R +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
H N++ +V T + +++E +GGELF+ + SE+EA F +Q++ GV+Y H+
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 117 MQICHRDLKLEN-TLLDGST-APRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKK 174
+I H DLK EN LLD + P +K+ DFG + + K+ GTP ++APE++ +
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE 193
Query: 175 EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPD--YVRVSLE 232
G AD+WS GV Y++L GA PF D K ++T+ I SV Y F + + S
Sbjct: 194 PL-GLEADMWSIGVITYILLSGASPFLG--DTK--QETLANITSVSYDFDEEFFSHTSEL 248
Query: 233 CKHLLSRIFVANSEKRITIPEIKNHPW 259
K + ++ V + KR+TI E HPW
Sbjct: 249 AKDFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 152 bits (383), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 92/267 (34%), Positives = 147/267 (55%), Gaps = 16/267 (5%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQK-------IDEHVQREIMNHRSLK 56
Y+I +++GSG F + K R+K T A KFI++ Q E ++RE+ R +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
H N++ +V T + +++E +GGELF+ + SE+EA F +Q++ GV+Y H+
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 117 MQICHRDLKLEN-TLLDGST-APRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKK 174
+I H DLK EN LLD + P +K+ DFG + + K+ GTP ++APE++ +
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE 193
Query: 175 EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPD--YVRVSLE 232
G AD+WS GV Y++L GA PF D K ++T+ I +V Y F + + + S
Sbjct: 194 PL-GLEADMWSIGVITYILLSGASPFLG--DTK--QETLANITAVSYDFDEEFFSQTSEL 248
Query: 233 CKHLLSRIFVANSEKRITIPEIKNHPW 259
K + ++ V + KR+TI E HPW
Sbjct: 249 AKDFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 152 bits (383), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/269 (33%), Positives = 149/269 (55%), Gaps = 10/269 (3%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID--EHVQREIMNHRSLKHP 58
+E +++V+ +G G +G +L ++ T E +AVK ++ + +D E++++EI ++ L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQ 118
N+V+F + +EY +GGELF+RI E +A+ FF QL++GV Y H +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPK---STVGTPAYIAPEVLTKKE 175
I HRD+K EN LLD +KI DFG + +++ + GT Y+APE+L ++E
Sbjct: 125 ITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 176 YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKH 235
+ + DVWSCG+ L ML G P++ P D + ++ Y P + ++
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD--SCQEYSDWKEKKTYLNP-WKKIDSAPLA 239
Query: 236 LLSRIFVANSEKRITIPEIKNHPWFLRNL 264
LL +I V N RITIP+IK W+ + L
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWYNKPL 268
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 152 bits (383), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/269 (33%), Positives = 149/269 (55%), Gaps = 10/269 (3%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID--EHVQREIMNHRSLKHP 58
+E +++V+ +G G +G +L ++ T E +AVK ++ + +D E++++EI ++ L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 65
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQ 118
N+V+F + +EY +GGELF+RI E +A+ FF QL++GV Y H +
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPK---STVGTPAYIAPEVLTKKE 175
I HRD+K EN LLD +KI DFG + +++ + GT Y+APE+L ++E
Sbjct: 126 ITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 183
Query: 176 YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKH 235
+ + DVWSCG+ L ML G P++ P D + ++ Y P + ++
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD--SCQEYSDWKEKKTYLNP-WKKIDSAPLA 240
Query: 236 LLSRIFVANSEKRITIPEIKNHPWFLRNL 264
LL +I V N RITIP+IK W+ + L
Sbjct: 241 LLHKILVENPSARITIPDIKKDRWYNKPL 269
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 152 bits (383), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/269 (33%), Positives = 149/269 (55%), Gaps = 10/269 (3%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID--EHVQREIMNHRSLKHP 58
+E +++V+ +G G +G +L ++ T E +AVK ++ + +D E++++EI ++ L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQ 118
N+V+F + +EY +GGELF+RI E +A+ FF QL++GV Y H +
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPK---STVGTPAYIAPEVLTKKE 175
I HRD+K EN LLD +KI DFG + +++ + GT Y+APE+L ++E
Sbjct: 126 ITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 176 YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKH 235
+ + DVWSCG+ L ML G P++ P D + ++ Y P + ++
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD--SCQEYSDWKEKKTYLNP-WKKIDSAPLA 240
Query: 236 LLSRIFVANSEKRITIPEIKNHPWFLRNL 264
LL +I V N RITIP+IK W+ + L
Sbjct: 241 LLHKILVENPSARITIPDIKKDRWYNKPL 269
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 152 bits (383), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/269 (33%), Positives = 149/269 (55%), Gaps = 10/269 (3%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID--EHVQREIMNHRSLKHP 58
+E +++V+ +G G +G +L ++ T E +AVK ++ + +D E++++EI ++ L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQ 118
N+V+F + +EY +GGELF+RI E +A+ FF QL++GV Y H +
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPK---STVGTPAYIAPEVLTKKE 175
I HRD+K EN LLD +KI DFG + +++ + GT Y+APE+L ++E
Sbjct: 126 ITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 176 YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKH 235
+ + DVWSCG+ L ML G P++ P D + ++ Y P + ++
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD--SCQEYSDWKEKKTYLNP-WKKIDSAPLA 240
Query: 236 LLSRIFVANSEKRITIPEIKNHPWFLRNL 264
LL +I V N RITIP+IK W+ + L
Sbjct: 241 LLHKILVENPSARITIPDIKKDRWYNKPL 269
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 152 bits (383), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/269 (33%), Positives = 149/269 (55%), Gaps = 10/269 (3%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID--EHVQREIMNHRSLKHP 58
+E +++V+ +G G +G +L ++ T E +AVK ++ + +D E++++EI ++ L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQ 118
N+V+F + +EY +GGELF+RI E +A+ FF QL++GV Y H +
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPK---STVGTPAYIAPEVLTKKE 175
I HRD+K EN LLD +KI DFG + +++ + GT Y+APE+L ++E
Sbjct: 126 ITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 176 YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKH 235
+ + DVWSCG+ L ML G P++ P D + ++ Y P + ++
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD--SCQEYSDWKEKKTYLNP-WKKIDSAPLA 240
Query: 236 LLSRIFVANSEKRITIPEIKNHPWFLRNL 264
LL +I V N RITIP+IK W+ + L
Sbjct: 241 LLHKILVENPSARITIPDIKKDRWYNKPL 269
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 152 bits (383), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/269 (33%), Positives = 149/269 (55%), Gaps = 10/269 (3%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID--EHVQREIMNHRSLKHP 58
+E +++V+ +G G +G +L ++ T E +AVK ++ + +D E++++EI ++ L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQ 118
N+V+F + +EY +GGELF+RI E +A+ FF QL++GV Y H +
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPK---STVGTPAYIAPEVLTKKE 175
I HRD+K EN LLD +KI DFG + +++ + GT Y+APE+L ++E
Sbjct: 126 ITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 176 YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKH 235
+ + DVWSCG+ L ML G P++ P D + ++ Y P + ++
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD--SCQEYSDWKEKKTYLNP-WKKIDSAPLA 240
Query: 236 LLSRIFVANSEKRITIPEIKNHPWFLRNL 264
LL +I V N RITIP+IK W+ + L
Sbjct: 241 LLHKILVENPSARITIPDIKKDRWYNKPL 269
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 152 bits (383), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/269 (33%), Positives = 149/269 (55%), Gaps = 10/269 (3%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID--EHVQREIMNHRSLKHP 58
+E +++V+ +G G +G +L ++ T E +AVK ++ + +D E++++EI ++ L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQ 118
N+V+F + +EY +GGELF+RI E +A+ FF QL++GV Y H +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPK---STVGTPAYIAPEVLTKKE 175
I HRD+K EN LLD +KI DFG + +++ + GT Y+APE+L ++E
Sbjct: 125 ITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 176 YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKH 235
+ + DVWSCG+ L ML G P++ P D + ++ Y P + ++
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD--SCQEYSDWKEKKTYLNP-WKKIDSAPLA 239
Query: 236 LLSRIFVANSEKRITIPEIKNHPWFLRNL 264
LL +I V N RITIP+IK W+ + L
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWYNKPL 268
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 151 bits (382), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 91/269 (33%), Positives = 149/269 (55%), Gaps = 10/269 (3%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID--EHVQREIMNHRSLKHP 58
+E +++V+ +G G +G +L ++ T E +AVK ++ + +D E++++EI ++ L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQ 118
N+V+F + +EY +GGELF+RI E +A+ FF QL++GV Y H +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPK---STVGTPAYIAPEVLTKKE 175
I HRD+K EN LLD +KI DFG + +++ + GT Y+APE+L ++E
Sbjct: 125 ITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 176 YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKH 235
+ + DVWSCG+ L ML G P++ P D + ++ Y P + ++
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD--SCQEYSDWKEKKTYLNP-WKKIDSAPLA 239
Query: 236 LLSRIFVANSEKRITIPEIKNHPWFLRNL 264
LL +I V N RITIP+IK W+ + L
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWYNKPL 268
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 151 bits (382), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 92/267 (34%), Positives = 147/267 (55%), Gaps = 16/267 (5%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQK-------IDEHVQREIMNHRSLK 56
Y+I +++GSG F + K R+K T A KFI++ Q E ++RE+ R +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
H N++ +V T + +++E +GGELF+ + SE+EA F +Q++ GV+Y H+
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 117 MQICHRDLKLEN-TLLDGST-APRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKK 174
+I H DLK EN LLD + P +K+ DFG + + K+ GTP ++APE++ +
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE 193
Query: 175 EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPD--YVRVSLE 232
G AD+WS GV Y++L GA PF D K ++T+ I +V Y F + + + S
Sbjct: 194 PL-GLEADMWSIGVITYILLSGASPFLG--DTK--QETLANITAVSYDFDEEFFSQTSEL 248
Query: 233 CKHLLSRIFVANSEKRITIPEIKNHPW 259
K + ++ V + KR+TI E HPW
Sbjct: 249 AKDFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 151 bits (382), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 91/269 (33%), Positives = 149/269 (55%), Gaps = 10/269 (3%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID--EHVQREIMNHRSLKHP 58
+E +++V+ +G G +G +L ++ T E +AVK ++ + +D E++++EI ++ L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQ 118
N+V+F + +EY +GGELF+RI E +A+ FF QL++GV Y H +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPK---STVGTPAYIAPEVLTKKE 175
I HRD+K EN LLD +KI DFG + +++ + GT Y+APE+L ++E
Sbjct: 125 ITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 176 YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKH 235
+ + DVWSCG+ L ML G P++ P D + ++ Y P + ++
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD--SCQEYSDWKEKKTYLNP-WKKIDSAPLA 239
Query: 236 LLSRIFVANSEKRITIPEIKNHPWFLRNL 264
LL +I V N RITIP+IK W+ + L
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWYNKPL 268
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 151 bits (382), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 91/269 (33%), Positives = 149/269 (55%), Gaps = 10/269 (3%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID--EHVQREIMNHRSLKHP 58
+E +++V+ +G G +G +L ++ T E +AVK ++ + +D E++++EI ++ L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQ 118
N+V+F + +EY +GGELF+RI E +A+ FF QL++GV Y H +
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPK---STVGTPAYIAPEVLTKKE 175
I HRD+K EN LLD +KI DFG + +++ + GT Y+APE+L ++E
Sbjct: 126 ITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 176 YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKH 235
+ + DVWSCG+ L ML G P++ P D + ++ Y P + ++
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD--SCQEYSDWKEKKTYLNP-WKKIDSAPLA 240
Query: 236 LLSRIFVANSEKRITIPEIKNHPWFLRNL 264
LL +I V N RITIP+IK W+ + L
Sbjct: 241 LLHKILVENPSARITIPDIKKDRWYNKPL 269
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 151 bits (382), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 91/269 (33%), Positives = 149/269 (55%), Gaps = 10/269 (3%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID--EHVQREIMNHRSLKHP 58
+E +++V+ +G G +G +L ++ T E +AVK ++ + +D E++++EI ++ L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQ 118
N+V+F + +EY +GGELF+RI E +A+ FF QL++GV Y H +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPK---STVGTPAYIAPEVLTKKE 175
I HRD+K EN LLD +KI DFG + +++ + GT Y+APE+L ++E
Sbjct: 125 ITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 176 YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKH 235
+ + DVWSCG+ L ML G P++ P D + ++ Y P + ++
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD--SCQEYSDWKEKKTYLNP-WKKIDSAPLA 239
Query: 236 LLSRIFVANSEKRITIPEIKNHPWFLRNL 264
LL +I V N RITIP+IK W+ + L
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWYNKPL 268
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 151 bits (382), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 91/269 (33%), Positives = 149/269 (55%), Gaps = 10/269 (3%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID--EHVQREIMNHRSLKHP 58
+E +++V+ +G G +G +L ++ T E +AVK ++ + +D E++++EI ++ L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQ 118
N+V+F + +EY +GGELF+RI E +A+ FF QL++GV Y H +
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPK---STVGTPAYIAPEVLTKKE 175
I HRD+K EN LLD +KI DFG + +++ + GT Y+APE+L ++E
Sbjct: 126 ITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 176 YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKH 235
+ + DVWSCG+ L ML G P++ P D + ++ Y P + ++
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD--SCQEYSDWKEKKTYLNP-WKKIDSAPLA 240
Query: 236 LLSRIFVANSEKRITIPEIKNHPWFLRNL 264
LL +I V N RITIP+IK W+ + L
Sbjct: 241 LLHKILVENPSARITIPDIKKDRWYNKPL 269
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 151 bits (382), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 91/269 (33%), Positives = 149/269 (55%), Gaps = 10/269 (3%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID--EHVQREIMNHRSLKHP 58
+E +++V+ +G G +G +L ++ T E +AVK ++ + +D E++++EI ++ L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQ 118
N+V+F + +EY +GGELF+RI E +A+ FF QL++GV Y H +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPK---STVGTPAYIAPEVLTKKE 175
I HRD+K EN LLD +KI DFG + +++ + GT Y+APE+L ++E
Sbjct: 125 ITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 176 YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKH 235
+ + DVWSCG+ L ML G P++ P D + ++ Y P + ++
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD--SCQEYSDWKEKKTYLNP-WKKIDSAPLA 239
Query: 236 LLSRIFVANSEKRITIPEIKNHPWFLRNL 264
LL +I V N RITIP+IK W+ + L
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWYNKPL 268
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 151 bits (382), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 91/269 (33%), Positives = 149/269 (55%), Gaps = 10/269 (3%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID--EHVQREIMNHRSLKHP 58
+E +++V+ +G G +G +L ++ T E +AVK ++ + +D E++++EI ++ L H
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 63
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQ 118
N+V+F + +EY +GGELF+RI E +A+ FF QL++GV Y H +
Sbjct: 64 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 123
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPK---STVGTPAYIAPEVLTKKE 175
I HRD+K EN LLD +KI DFG + +++ + GT Y+APE+L ++E
Sbjct: 124 ITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 181
Query: 176 YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKH 235
+ + DVWSCG+ L ML G P++ P D + ++ Y P + ++
Sbjct: 182 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD--SCQEYSDWKEKKTYLNP-WKKIDSAPLA 238
Query: 236 LLSRIFVANSEKRITIPEIKNHPWFLRNL 264
LL +I V N RITIP+IK W+ + L
Sbjct: 239 LLHKILVENPSARITIPDIKKDRWYNKPL 267
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 151 bits (382), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 91/269 (33%), Positives = 149/269 (55%), Gaps = 10/269 (3%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID--EHVQREIMNHRSLKHP 58
+E +++V+ +G G +G +L ++ T E +AVK ++ + +D E++++EI ++ L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQ 118
N+V+F + +EY +GGELF+RI E +A+ FF QL++GV Y H +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPK---STVGTPAYIAPEVLTKKE 175
I HRD+K EN LLD +KI DFG + +++ + GT Y+APE+L ++E
Sbjct: 125 ITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 176 YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKH 235
+ + DVWSCG+ L ML G P++ P D + ++ Y P + ++
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD--SCQEYSDWKEKKTYLNP-WKKIDSAPLA 239
Query: 236 LLSRIFVANSEKRITIPEIKNHPWFLRNL 264
LL +I V N RITIP+IK W+ + L
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWYNKPL 268
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 151 bits (382), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 91/269 (33%), Positives = 149/269 (55%), Gaps = 10/269 (3%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID--EHVQREIMNHRSLKHP 58
+E +++V+ +G G +G +L ++ T E +AVK ++ + +D E++++EI ++ L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQ 118
N+V+F + +EY +GGELF+RI E +A+ FF QL++GV Y H +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPK---STVGTPAYIAPEVLTKKE 175
I HRD+K EN LLD +KI DFG + +++ + GT Y+APE+L ++E
Sbjct: 125 ITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 176 YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKH 235
+ + DVWSCG+ L ML G P++ P D + ++ Y P + ++
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD--SCQEYSDWKEKKTYLNP-WKKIDSAPLA 239
Query: 236 LLSRIFVANSEKRITIPEIKNHPWFLRNL 264
LL +I V N RITIP+IK W+ + L
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWYNKPL 268
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 151 bits (382), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 93/264 (35%), Positives = 137/264 (51%), Gaps = 12/264 (4%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQ---KIDEHVQREIMNHRSLKHPNI 60
Y++ +++G G F V + + A K I + + + ++RE R LKHPNI
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 83
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQIC 120
VR + + H ++ + GGELFE I +SE +A QQ++ V +CH M +
Sbjct: 84 VRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVV 143
Query: 121 HRDLKLENTLLDGS-TAPRVKICDFGYSKSSVLHSQPK-STVGTPAYIAPEVLTKKEYDG 178
HRDLK EN LL VK+ DFG + Q GTP Y++PEVL K Y G
Sbjct: 144 HRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPY-G 202
Query: 179 KIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSF--PDYVRVSLECKHL 236
K D+W+CGV LY++LVG PF D + + +++ I + Y F P++ V+ E K L
Sbjct: 203 KPVDLWACGVILYILLVGYPPFWDEDQHRLYQQ----IKAGAYDFPSPEWDTVTPEAKDL 258
Query: 237 LSRIFVANSEKRITIPEIKNHPWF 260
++++ N KRIT E HPW
Sbjct: 259 INKMLTINPSKRITAAEALKHPWI 282
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 151 bits (381), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 91/269 (33%), Positives = 149/269 (55%), Gaps = 10/269 (3%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID--EHVQREIMNHRSLKHP 58
+E +++V+ +G G +G +L ++ T E +AVK ++ + +D E++++EI ++ L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQ 118
N+V+F + +EY +GGELF+RI E +A+ FF QL++GV Y H +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPK---STVGTPAYIAPEVLTKKE 175
I HRD+K EN LLD +KI DFG + +++ + GT Y+APE+L ++E
Sbjct: 125 ITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 176 YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKH 235
+ + DVWSCG+ L ML G P++ P D + ++ Y P + ++
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD--SCQEYSDWKEKKTYLNP-WKKIDSAPLA 239
Query: 236 LLSRIFVANSEKRITIPEIKNHPWFLRNL 264
LL +I V N RITIP+IK W+ + L
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWYNKPL 268
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 151 bits (381), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 91/269 (33%), Positives = 149/269 (55%), Gaps = 10/269 (3%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID--EHVQREIMNHRSLKHP 58
+E +++V+ +G G +G +L ++ T E +AVK ++ + +D E++++EI ++ L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQ 118
N+V+F + +EY +GGELF+RI E +A+ FF QL++GV Y H +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPK---STVGTPAYIAPEVLTKKE 175
I HRD+K EN LLD +KI DFG + +++ + GT Y+APE+L ++E
Sbjct: 125 ITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 176 YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKH 235
+ + DVWSCG+ L ML G P++ P D + ++ Y P + ++
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD--SCQEYSDWKEKKTYLNP-WKKIDSAPLA 239
Query: 236 LLSRIFVANSEKRITIPEIKNHPWFLRNL 264
LL +I V N RITIP+IK W+ + L
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWYNKPL 268
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 150 bits (379), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 96/265 (36%), Positives = 138/265 (52%), Gaps = 12/265 (4%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQ---KIDEHVQREIMNHRSLKHP 58
+ Y++ +DIG G F V + T A K I + + + ++RE R LKH
Sbjct: 4 DEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHS 63
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQ 118
NIVR + + +V + GGELFE I +SE +A QQ++ V +CH M
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMG 123
Query: 119 ICHRDLKLENTLLDGST-APRVKICDFGYSKSSVLHSQPK-STVGTPAYIAPEVLTKKEY 176
+ HRDLK EN LL VK+ DFG + Q GTP Y++PEVL K+ Y
Sbjct: 124 VVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAY 183
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSF--PDYVRVSLECK 234
GK D+W+CGV LY++LVG PF D + K +++ I + Y F P++ V+ E K
Sbjct: 184 -GKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQ----IKAGAYDFPSPEWDTVTPEAK 238
Query: 235 HLLSRIFVANSEKRITIPEIKNHPW 259
+L++++ N KRIT E HPW
Sbjct: 239 NLINQMLTINPAKRITAHEALKHPW 263
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/269 (33%), Positives = 148/269 (55%), Gaps = 10/269 (3%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID--EHVQREIMNHRSLKHP 58
+E +++V+ +G G +G +L ++ T E +AVK ++ + +D E++++EI + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHE 65
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQ 118
N+V+F + +EY +GGELF+RI E +A+ FF QL++GV Y H +
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPK---STVGTPAYIAPEVLTKKE 175
I HRD+K EN LLD +KI DFG + +++ + GT Y+APE+L ++E
Sbjct: 126 ITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 176 YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKH 235
+ + DVWSCG+ L ML G P++ P D + ++ Y P + ++
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD--SCQEYSDWKEKKTYLNP-WKKIDSAPLA 240
Query: 236 LLSRIFVANSEKRITIPEIKNHPWFLRNL 264
LL +I V N RITIP+IK W+ + L
Sbjct: 241 LLHKILVENPSARITIPDIKKDRWYNKPL 269
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 150 bits (378), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/266 (34%), Positives = 142/266 (53%), Gaps = 12/266 (4%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID-EHVQREIMNHRSLKHPNIVR 62
Y + IG G++G K+ K TR A K I + D + ++EI +SL HPNI+R
Sbjct: 28 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 87
Query: 63 FKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICHR 122
E T + +VME GGELFER+ + F E +A + ++S V+YCH + + HR
Sbjct: 88 LYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHR 147
Query: 123 DLKLENTLL--DGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKI 180
DLK EN L D +P +K+ DFG + ++ VGTP Y++P+VL + G
Sbjct: 148 DLKPENFLFLTDSPDSP-LKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVL--EGLYGPE 204
Query: 181 ADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFP--DYVRVSLECKHLLS 238
D WS GV +YV+L G PF P D + + +I ++FP D++ VS + + L+
Sbjct: 205 CDEWSAGVMMYVLLCGYPPFSAPTD----XEVMLKIREGTFTFPEKDWLNVSPQAESLIR 260
Query: 239 RIFVANSEKRITIPEIKNHPWFLRNL 264
R+ + ++RIT + H WF + L
Sbjct: 261 RLLTKSPKQRITSLQALEHEWFEKQL 286
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 150 bits (378), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/266 (34%), Positives = 142/266 (53%), Gaps = 12/266 (4%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID-EHVQREIMNHRSLKHPNIVR 62
Y + IG G++G K+ K TR A K I + D + ++EI +SL HPNI+R
Sbjct: 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 70
Query: 63 FKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICHR 122
E T + +VME GGELFER+ + F E +A + ++S V+YCH + + HR
Sbjct: 71 LYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHR 130
Query: 123 DLKLENTLL--DGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKI 180
DLK EN L D +P +K+ DFG + ++ VGTP Y++P+VL + G
Sbjct: 131 DLKPENFLFLTDSPDSP-LKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVL--EGLYGPE 187
Query: 181 ADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFP--DYVRVSLECKHLLS 238
D WS GV +YV+L G PF P D + + +I ++FP D++ VS + + L+
Sbjct: 188 CDEWSAGVMMYVLLCGYPPFSAPTD----XEVMLKIREGTFTFPEKDWLNVSPQAESLIR 243
Query: 239 RIFVANSEKRITIPEIKNHPWFLRNL 264
R+ + ++RIT + H WF + L
Sbjct: 244 RLLTKSPKQRITSLQALEHEWFEKQL 269
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/269 (33%), Positives = 148/269 (55%), Gaps = 10/269 (3%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID--EHVQREIMNHRSLKHP 58
+E +++V+ +G G G +L ++ T E +AVK ++ + +D E++++EI ++ L H
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQ 118
N+V+F + +EY +GGELF+RI E +A+ FF QL++GV Y H +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPK---STVGTPAYIAPEVLTKKE 175
I HRD+K EN LLD +KI DFG + +++ + GT Y+APE+L ++E
Sbjct: 125 ITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 176 YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKH 235
+ + DVWSCG+ L ML G P++ P D + ++ Y P + ++
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSD--SCQEYSDWKEKKTYLNP-WKKIDSAPLA 239
Query: 236 LLSRIFVANSEKRITIPEIKNHPWFLRNL 264
LL +I V N RITIP+IK W+ + L
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWYNKPL 268
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 149 bits (376), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/265 (36%), Positives = 141/265 (53%), Gaps = 13/265 (4%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIER---GQKID-EHVQREIMNHRSLKH 57
+RY+ + +G G+FG L +DK T + AVK I + QK D E + RE+ + L H
Sbjct: 50 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 109
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSM 117
PNI++ E + +V E GGELF+ I + RFSE +A +Q++SG++Y H
Sbjct: 110 PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN 169
Query: 118 QICHRDLKLENTLLDG-STAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
+I HRDLK EN LL+ S ++I DFG S + K +GT YIAPEVL Y
Sbjct: 170 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL-HGTY 228
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSF--PDYVRVSLECK 234
D K DVWS GV LY++L G PF + N + ++ Y+F P + +VS K
Sbjct: 229 DEK-CDVWSTGVILYILLSGCPPF----NGANEYDILKKVEKGKYTFELPQWKKVSESAK 283
Query: 235 HLLSRIFVANSEKRITIPEIKNHPW 259
L+ ++ RI+ + +H W
Sbjct: 284 DLIRKMLTYVPSMRISARDALDHEW 308
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 149 bits (376), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/265 (36%), Positives = 141/265 (53%), Gaps = 13/265 (4%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIER---GQKID-EHVQREIMNHRSLKH 57
+RY+ + +G G+FG L +DK T + AVK I + QK D E + RE+ + L H
Sbjct: 49 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 108
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSM 117
PNI++ E + +V E GGELF+ I + RFSE +A +Q++SG++Y H
Sbjct: 109 PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN 168
Query: 118 QICHRDLKLENTLLDG-STAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
+I HRDLK EN LL+ S ++I DFG S + K +GT YIAPEVL Y
Sbjct: 169 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL-HGTY 227
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSF--PDYVRVSLECK 234
D K DVWS GV LY++L G PF + N + ++ Y+F P + +VS K
Sbjct: 228 DEK-CDVWSTGVILYILLSGCPPF----NGANEYDILKKVEKGKYTFELPQWKKVSESAK 282
Query: 235 HLLSRIFVANSEKRITIPEIKNHPW 259
L+ ++ RI+ + +H W
Sbjct: 283 DLIRKMLTYVPSMRISARDALDHEW 307
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 149 bits (376), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/265 (36%), Positives = 141/265 (53%), Gaps = 13/265 (4%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIER---GQKID-EHVQREIMNHRSLKH 57
+RY+ + +G G+FG L +DK T + AVK I + QK D E + RE+ + L H
Sbjct: 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 85
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSM 117
PNI++ E + +V E GGELF+ I + RFSE +A +Q++SG++Y H
Sbjct: 86 PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN 145
Query: 118 QICHRDLKLENTLLDG-STAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
+I HRDLK EN LL+ S ++I DFG S + K +GT YIAPEVL Y
Sbjct: 146 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL-HGTY 204
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSF--PDYVRVSLECK 234
D K DVWS GV LY++L G PF + N + ++ Y+F P + +VS K
Sbjct: 205 DEK-CDVWSTGVILYILLSGCPPF----NGANEYDILKKVEKGKYTFELPQWKKVSESAK 259
Query: 235 HLLSRIFVANSEKRITIPEIKNHPW 259
L+ ++ RI+ + +H W
Sbjct: 260 DLIRKMLTYVPSMRISARDALDHEW 284
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 149 bits (376), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/268 (35%), Positives = 140/268 (52%), Gaps = 12/268 (4%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQ---KIDEHVQREIMNHRSLKHP 58
+ Y++ +++G G F V + T + A K I + + + ++RE R LKHP
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 63
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQ 118
NIVR + + +V + GGELFE I +SE +A QQ++ V++CH
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNG 123
Query: 119 ICHRDLKLENTLL-DGSTAPRVKICDFGYSKSSVLHSQPK-STVGTPAYIAPEVLTKKEY 176
I HRDLK EN LL S VK+ DFG + Q GTP Y++PEVL K Y
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPY 183
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSF--PDYVRVSLECK 234
GK D+W+CGV LY++LVG PF D + + +++ I + Y F P++ V+ E K
Sbjct: 184 -GKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQ----IKAGAYDFPSPEWDTVTPEAK 238
Query: 235 HLLSRIFVANSEKRITIPEIKNHPWFLR 262
L++++ N KRIT E HPW +
Sbjct: 239 DLINKMLTINPAKRITASEALKHPWICQ 266
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 149 bits (375), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/266 (35%), Positives = 140/266 (52%), Gaps = 12/266 (4%)
Query: 2 ERYEIVKDIGSGNFGVAK-LVRDKWTRELLAVKFIERGQKIDEH--VQREIMNHRSLKHP 58
E Y++ +++G G F V + V+ +E A+ + +H ++RE R LKHP
Sbjct: 11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHP 70
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQ 118
NIVR + + H ++ + GGELFE I +SE +A QQ++ V +CH M
Sbjct: 71 NIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMG 130
Query: 119 ICHRDLKLENTLLDGS-TAPRVKICDFGYSKSSVLHSQPK-STVGTPAYIAPEVLTKKEY 176
+ HR+LK EN LL VK+ DFG + Q GTP Y++PEVL K Y
Sbjct: 131 VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPY 190
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSF--PDYVRVSLECK 234
GK D+W+CGV LY++LVG PF D + + +++ I + Y F P++ V+ E K
Sbjct: 191 -GKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQ----IKAGAYDFPSPEWDTVTPEAK 245
Query: 235 HLLSRIFVANSEKRITIPEIKNHPWF 260
L++++ N KRIT E HPW
Sbjct: 246 DLINKMLTINPSKRITAAEALKHPWI 271
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 149 bits (375), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/268 (35%), Positives = 140/268 (52%), Gaps = 12/268 (4%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQ---KIDEHVQREIMNHRSLKHP 58
+ Y++ +++G G F V + T + A K I + + + ++RE R LKHP
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 63
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQ 118
NIVR + + +V + GGELFE I +SE +A QQ++ V++CH
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNG 123
Query: 119 ICHRDLKLENTLL-DGSTAPRVKICDFGYSKSSVLHSQPK-STVGTPAYIAPEVLTKKEY 176
I HRDLK EN LL S VK+ DFG + Q GTP Y++PEVL K Y
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPY 183
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSF--PDYVRVSLECK 234
GK D+W+CGV LY++LVG PF D + + +++ I + Y F P++ V+ E K
Sbjct: 184 -GKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQ----IKAGAYDFPSPEWDTVTPEAK 238
Query: 235 HLLSRIFVANSEKRITIPEIKNHPWFLR 262
L++++ N KRIT E HPW +
Sbjct: 239 DLINKMLTINPAKRITASEALKHPWICQ 266
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 148 bits (374), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 92/261 (35%), Positives = 136/261 (52%), Gaps = 10/261 (3%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIERGQKI-DEHVQREIMNHRSLKHPNIVRFKEVLL 68
+GSG F LV+ + T +L A+K I++ D ++ EI + +KH NIV +++
Sbjct: 17 LGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYE 76
Query: 69 TPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLEN 128
+ TH +VM+ +GGELF+RI G ++E +A QQ++S V Y H I HRDLK EN
Sbjct: 77 STTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPEN 136
Query: 129 TL-LDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKIADVWSCG 187
L L ++ I DFG SK + + GTP Y+APEVL +K Y K D WS G
Sbjct: 137 LLYLTPEENSKIMITDFGLSKME-QNGIMSTACGTPGYVAPEVLAQKPY-SKAVDCWSIG 194
Query: 188 VTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSF--PDYVRVSLECKHLLSRIFVANS 245
V Y++L G PF + + K F K I +Y F P + +S K + + +
Sbjct: 195 VITYILLCGYPPFYEETESKLFEK----IKEGYYEFESPFWDDISESAKDFICHLLEKDP 250
Query: 246 EKRITIPEIKNHPWFLRNLPI 266
+R T + +HPW N +
Sbjct: 251 NERYTCEKALSHPWIDGNTAL 271
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 148 bits (373), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 97/265 (36%), Positives = 141/265 (53%), Gaps = 13/265 (4%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIER---GQKID-EHVQREIMNHRSLKH 57
+RY+ + +G G+FG L +DK T + AVK I + QK D E + RE+ + L H
Sbjct: 32 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 91
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSM 117
PNI++ E + +V E GGELF+ I + RFSE +A +Q++SG++Y H
Sbjct: 92 PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN 151
Query: 118 QICHRDLKLENTLLDG-STAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
+I HRDLK EN LL+ S ++I DFG S + K +GT YIAPEVL Y
Sbjct: 152 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL-HGTY 210
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSF--PDYVRVSLECK 234
D K DVWS GV LY++L G PF + N + ++ Y+F P + +VS K
Sbjct: 211 DEK-CDVWSTGVILYILLSGCPPF----NGANEYDILKKVEKGKYTFELPQWKKVSESAK 265
Query: 235 HLLSRIFVANSEKRITIPEIKNHPW 259
L+ ++ RI+ + +H W
Sbjct: 266 DLIRKMLTYVPSMRISARDALDHEW 290
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 147 bits (371), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 97/265 (36%), Positives = 139/265 (52%), Gaps = 13/265 (4%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIER---GQKID-EHVQREIMNHRSLKH 57
+RY+ + +G G+FG L +DK T + AVK I + QK D E + RE+ + L H
Sbjct: 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 85
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSM 117
PNI + E + +V E GGELF+ I + RFSE +A +Q++SG++Y H
Sbjct: 86 PNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKN 145
Query: 118 QICHRDLKLENTLLDG-STAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
+I HRDLK EN LL+ S ++I DFG S + K +GT YIAPEVL Y
Sbjct: 146 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVL-HGTY 204
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSF--PDYVRVSLECK 234
D K DVWS GV LY++L G PF + N + ++ Y+F P + +VS K
Sbjct: 205 DEK-CDVWSTGVILYILLSGCPPF----NGANEYDILKKVEKGKYTFELPQWKKVSESAK 259
Query: 235 HLLSRIFVANSEKRITIPEIKNHPW 259
L+ + RI+ + +H W
Sbjct: 260 DLIRKXLTYVPSXRISARDALDHEW 284
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/263 (34%), Positives = 134/263 (50%), Gaps = 7/263 (2%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQ---KIDEHVQREIMNHRSLKHP 58
+ Y++ +++G G F V + K T A K I + + + ++RE R L+HP
Sbjct: 29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP 88
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQ 118
NIVR + + + +V + GGELFE I +SE +A QQ++ ++YCHS
Sbjct: 89 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNG 148
Query: 119 ICHRDLKLENTLL-DGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYD 177
I HR+LK EN LL + VK+ DFG + GTP Y++PEVL K Y
Sbjct: 149 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPY- 207
Query: 178 GKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHLL 237
K D+W+CGV LY++LVG PF D ED I + + Y P++ V+ E K L+
Sbjct: 208 SKPVDIWACGVILYILLVGYPPFWD-EDQHRLYAQI-KAGAYDYPSPEWDTVTPEAKSLI 265
Query: 238 SRIFVANSEKRITIPEIKNHPWF 260
+ N +KRIT + PW
Sbjct: 266 DSMLTVNPKKRITADQALKVPWI 288
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 145 bits (365), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 91/262 (34%), Positives = 134/262 (51%), Gaps = 7/262 (2%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQ---KIDEHVQREIMNHRSLKHP 58
+ Y++ +++G G F V + K T A K I + + + ++RE R L+HP
Sbjct: 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP 65
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQ 118
NIVR + + + +V + GGELFE I +SE +A QQ++ ++YCHS
Sbjct: 66 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNG 125
Query: 119 ICHRDLKLENTLL-DGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYD 177
I HR+LK EN LL + VK+ DFG + GTP Y++PEVL K Y
Sbjct: 126 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPY- 184
Query: 178 GKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHLL 237
K D+W+CGV LY++LVG PF D ED I + + Y P++ V+ E K L+
Sbjct: 185 SKPVDIWACGVILYILLVGYPPFWD-EDQHRLYAQI-KAGAYDYPSPEWDTVTPEAKSLI 242
Query: 238 SRIFVANSEKRITIPEIKNHPW 259
+ N +KRIT + PW
Sbjct: 243 DSMLTVNPKKRITADQALKVPW 264
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 144 bits (364), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 91/263 (34%), Positives = 134/263 (50%), Gaps = 7/263 (2%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQ---KIDEHVQREIMNHRSLKHP 58
+ Y++ +++G G F V + K T A K I + + + ++RE R L+HP
Sbjct: 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP 65
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQ 118
NIVR + + + +V + GGELFE I +SE +A QQ++ ++YCHS
Sbjct: 66 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNG 125
Query: 119 ICHRDLKLENTLLDG-STAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYD 177
I HR+LK EN LL + VK+ DFG + GTP Y++PEVL K Y
Sbjct: 126 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPY- 184
Query: 178 GKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHLL 237
K D+W+CGV LY++LVG PF D ED I + + Y P++ V+ E K L+
Sbjct: 185 SKPVDIWACGVILYILLVGYPPFWD-EDQHRLYAQI-KAGAYDYPSPEWDTVTPEAKSLI 242
Query: 238 SRIFVANSEKRITIPEIKNHPWF 260
+ N +KRIT + PW
Sbjct: 243 DSMLTVNPKKRITADQALKVPWI 265
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 144 bits (364), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 91/263 (34%), Positives = 134/263 (50%), Gaps = 7/263 (2%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQ---KIDEHVQREIMNHRSLKHP 58
+ Y++ +++G G F V + K T A K I + + + ++RE R L+HP
Sbjct: 5 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP 64
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQ 118
NIVR + + + +V + GGELFE I +SE +A QQ++ ++YCHS
Sbjct: 65 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNG 124
Query: 119 ICHRDLKLENTLL-DGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYD 177
I HR+LK EN LL + VK+ DFG + GTP Y++PEVL K Y
Sbjct: 125 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPY- 183
Query: 178 GKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHLL 237
K D+W+CGV LY++LVG PF D ED I + + Y P++ V+ E K L+
Sbjct: 184 SKPVDIWACGVILYILLVGYPPFWD-EDQHRLYAQI-KAGAYDYPSPEWDTVTPEAKSLI 241
Query: 238 SRIFVANSEKRITIPEIKNHPWF 260
+ N +KRIT + PW
Sbjct: 242 DSMLTVNPKKRITADQALKVPWI 264
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 144 bits (362), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 92/265 (34%), Positives = 137/265 (51%), Gaps = 12/265 (4%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQ---KIDEHVQREIMNHRSLKHP 58
+ Y++ +++G G F V + K + A K I + + + ++RE R LKHP
Sbjct: 31 DDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 90
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQ 118
NIVR + + +V + GGELFE I +SE +A Q++ V++ H
Sbjct: 91 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQHD 150
Query: 119 ICHRDLKLENTLLDGST-APRVKICDFGYSKSSVLHSQPK-STVGTPAYIAPEVLTKKEY 176
I HRDLK EN LL VK+ DFG + Q GTP Y++PEVL K Y
Sbjct: 151 IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPY 210
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSF--PDYVRVSLECK 234
GK D+W+CGV LY++LVG PF D + K +++ I + Y F P++ V+ E K
Sbjct: 211 -GKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQ----IKAGAYDFPSPEWDTVTPEAK 265
Query: 235 HLLSRIFVANSEKRITIPEIKNHPW 259
+L++++ N KRIT + HPW
Sbjct: 266 NLINQMLTINPAKRITADQALKHPW 290
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 142 bits (358), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 140/269 (52%), Gaps = 20/269 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERG----QKIDEHVQREIMNHRSLK 56
++ ++I++ +G+G+FG L+R + A+K +++ K EH E + +
Sbjct: 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT 64
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HP I+R + ++M+Y GGELF + + RF A+F+ ++ + Y HS
Sbjct: 65 HPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHS 124
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
I +RDLK EN LLD + +KI DFG++K + GTP YIAPEV++ K Y
Sbjct: 125 KDIIYRDLKPENILLDKNG--HIKITDFGFAK--YVPDVTYXLCGTPDYIAPEVVSTKPY 180
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
+ I D WS G+ +Y ML G PF D N KT +IL+ FP + + + K L
Sbjct: 181 NKSI-DWWSFGILIYEMLAGYTPFYD----SNTMKTYEKILNAELRFPPF--FNEDVKDL 233
Query: 237 LSRIFVANSEKRI-----TIPEIKNHPWF 260
LSR+ + +R+ ++KNHPWF
Sbjct: 234 LSRLITRDLSQRLGNLQNGTEDVKNHPWF 262
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 141 bits (356), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 144/270 (53%), Gaps = 20/270 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQ----KIDEHVQREIMNHRSLK 56
++ ++IV+ +G G FG L R+K + ++A+K + + Q ++ ++REI L+
Sbjct: 13 IDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 72
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HPNI+R + +++E+A GEL++ + GRF E + F ++L + YCH
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHE 132
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVLTK 173
++ HRD+K EN L+ +KI DFG+S +H+ + + GT Y+ PE++
Sbjct: 133 RKVIHRDIKPENLLM--GYKGELKIADFGWS----VHAPSLRRRXMCGTLDYLPPEMIEG 186
Query: 174 KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLEC 233
K +D K+ D+W GV Y LVG PF+ P + R RI++V FP + +S
Sbjct: 187 KTHDEKV-DLWCAGVLCYEFLVGMPPFDSPSHTETHR----RIVNVDLKFPPF--LSDGS 239
Query: 234 KHLLSRIFVANSEKRITIPEIKNHPWFLRN 263
K L+S++ + +R+ + + HPW N
Sbjct: 240 KDLISKLLRYHPPQRLPLKGVMEHPWVKAN 269
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 143/270 (52%), Gaps = 20/270 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQ----KIDEHVQREIMNHRSLK 56
++ ++I + +G G FG L R+K + ++A+K + + Q ++ ++REI L+
Sbjct: 14 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 73
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HPNI+R + +++E+A GEL++ + GRF E + F ++L + YCH
Sbjct: 74 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHE 133
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVLTK 173
++ HRD+K EN L+ +KI DFG+S +H+ + + GT Y+ PE++
Sbjct: 134 RKVIHRDIKPENLLM--GYKGELKIADFGWS----VHAPSLRRRXMCGTLDYLPPEMIEG 187
Query: 174 KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLEC 233
K +D K+ D+W GV Y LVG PF+ P + R RI++V FP + +S
Sbjct: 188 KTHDEKV-DLWCAGVLCYEFLVGMPPFDSPSHTETHR----RIVNVDLKFPPF--LSDGS 240
Query: 234 KHLLSRIFVANSEKRITIPEIKNHPWFLRN 263
K L+S++ + +R+ + + HPW N
Sbjct: 241 KDLISKLLRYHPPQRLPLKGVMEHPWVKAN 270
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 139 bits (349), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 143/270 (52%), Gaps = 20/270 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQ----KIDEHVQREIMNHRSLK 56
++ ++I + +G G FG L R+K + ++A+K + + Q ++ ++REI L+
Sbjct: 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 72
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HPNI+R + +++E+A GEL++ + GRF E + F ++L + YCH
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHE 132
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVLTK 173
++ HRD+K EN L+ +KI DFG+S +H+ + + GT Y+ PE++
Sbjct: 133 RKVIHRDIKPENLLM--GYKGELKIADFGWS----VHAPSLRRRXMCGTLDYLPPEMIEG 186
Query: 174 KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLEC 233
K +D K+ D+W GV Y LVG PF+ P + R RI++V FP + +S
Sbjct: 187 KTHDEKV-DLWCAGVLCYEFLVGMPPFDSPSHTETHR----RIVNVDLKFPPF--LSDGS 239
Query: 234 KHLLSRIFVANSEKRITIPEIKNHPWFLRN 263
K L+S++ + +R+ + + HPW N
Sbjct: 240 KDLISKLLRYHPPQRLPLKGVMEHPWVKAN 269
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 139 bits (349), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/261 (34%), Positives = 137/261 (52%), Gaps = 11/261 (4%)
Query: 8 KDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLK-HPNIVRFKEV 66
K +G G+F + + K + + AVK I + +++ + Q+EI + + HPNIV+ EV
Sbjct: 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISK--RMEANTQKEITALKLCEGHPNIVKLHEV 74
Query: 67 LLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKL 126
H +VME GGELFERI FSE EA + ++L+S VS+ H + + HRDLK
Sbjct: 75 FHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKP 134
Query: 127 ENTLL-DGSTAPRVKICDFGYSKSSVLHSQP-KSTVGTPAYIAPEVLTKKEYDGKIADVW 184
EN L D + +KI DFG+++ +QP K+ T Y APE+L + YD + D+W
Sbjct: 135 ENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYD-ESCDLW 193
Query: 185 SCGVTLYVMLVGAYPFEDPEDPKNFRKTI---GRILSVHYSFPD--YVRVSLECKHLLSR 239
S GV LY ML G PF+ + + +I +SF + VS E K L+
Sbjct: 194 SLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQG 253
Query: 240 IFVANSEKRITIPEIKNHPWF 260
+ + KR+ + ++ + W
Sbjct: 254 LLTVDPNKRLKMSGLRYNEWL 274
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 139 bits (349), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 83/255 (32%), Positives = 126/255 (49%), Gaps = 9/255 (3%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIE-RGQKIDEHVQREIMNHRSLKHPNIVRFKEVLL 68
+G G FG + T LA K I+ RG K E V+ EI L H N+++ +
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFE 156
Query: 69 TPTHLAIVMEYAAGGELFERICNAG-RFSEDEARFFFQQLISGVSYCHSMQICHRDLKLE 127
+ + +VMEY GGELF+RI + +E + F +Q+ G+ + H M I H DLK E
Sbjct: 157 SKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPE 216
Query: 128 NTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKIADVWSCG 187
N L A ++KI DFG ++ + K GTP ++APEV+ ++ D+WS G
Sbjct: 217 NILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVN-YDFVSFPTDMWSVG 275
Query: 188 VTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPD--YVRVSLECKHLLSRIFVANS 245
V Y++L G PF D +T+ IL+ + D + +S E K +S++ +
Sbjct: 276 VIAYMLLSGLSPFLGDNDA----ETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEK 331
Query: 246 EKRITIPEIKNHPWF 260
RI+ E HPW
Sbjct: 332 SWRISASEALKHPWL 346
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 137 bits (346), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 143/269 (53%), Gaps = 20/269 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID----EHVQREIMNHRSLK 56
++++E +K +G+G+FG LV+ K T A+K +++ + + EH E +++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
P +V+ + ++L +VMEYA GGE+F + GRFSE ARF+ Q++ Y HS
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
+ + +RDLK EN ++D +K+ DFG++K + + GTP Y+APE++ K Y
Sbjct: 161 LDLIYRDLKPENLMIDQQGY--IKVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
+ K D W+ GV +Y M G PF + + + K I+S FP + S + K L
Sbjct: 217 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK----IVSGKVRFPSH--FSSDLKDL 269
Query: 237 LSRIFVANSEKRI-----TIPEIKNHPWF 260
L + + KR + +IKNH WF
Sbjct: 270 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 137 bits (346), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 143/269 (53%), Gaps = 20/269 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID----EHVQREIMNHRSLK 56
++++E ++ +G+G+FG LV+ K T A+K +++ + + EH E +++
Sbjct: 41 LDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVN 100
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
P +V+ + ++L +V+EYA GGE+F + GRFSE ARF+ Q++ Y HS
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
+ + +RDLK EN L+D +K+ DFG++K + + GTP Y+APE++ K Y
Sbjct: 161 LDLIYRDLKPENLLIDQQGY--IKVADFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
+ K D W+ GV +Y M G PF + + + K I+S FP + S + K L
Sbjct: 217 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK----IVSGKVRFPSH--FSSDLKDL 269
Query: 237 LSRIFVANSEKRI-----TIPEIKNHPWF 260
L + + KR + +IKNH WF
Sbjct: 270 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 142/269 (52%), Gaps = 20/269 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID----EHVQREIMNHRSLK 56
++++E +K +G+G+FG LV+ K T A+K +++ + + EH E +++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
P +V+ + ++L +VMEY GGE+F + GRFSE ARF+ Q++ Y HS
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
+ + +RDLK EN L+D +++ DFG++K + + GTP Y+APE++ K Y
Sbjct: 160 LDLIYRDLKPENLLIDQQGY--IQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
+ K D W+ GV +Y M G PF + + + K I+S FP + S + K L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK----IVSGKVRFPSH--FSSDLKDL 268
Query: 237 LSRIFVANSEKRI-----TIPEIKNHPWF 260
L + + KR + +IKNH WF
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 142/269 (52%), Gaps = 20/269 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID----EHVQREIMNHRSLK 56
++++E +K +G+G+FG LV+ K T A+K +++ + + EH E +++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
P +V+ + ++L +VMEY GGE+F + GRFSE ARF+ Q++ Y HS
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
+ + +RDLK EN L+D +++ DFG++K + + GTP Y+APE++ K Y
Sbjct: 160 LDLIYRDLKPENLLIDQQGY--IQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
+ K D W+ GV +Y M G PF + + + K I+S FP + S + K L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK----IVSGKVRFPSH--FSSDLKDL 268
Query: 237 LSRIFVANSEKRI-----TIPEIKNHPWF 260
L + + KR + +IKNH WF
Sbjct: 269 LRNLLQVDLTKRFGNLKDGVNDIKNHKWF 297
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 142/269 (52%), Gaps = 20/269 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID----EHVQREIMNHRSLK 56
++++E +K +G+G+FG LV+ K T A+K +++ + + EH E +++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
P +V+ + ++L +VMEY GGE+F + GRFSE ARF+ Q++ Y HS
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
+ + +RDLK EN L+D +++ DFG++K + + GTP Y+APE++ K Y
Sbjct: 160 LDLIYRDLKPENLLIDQQGY--IQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
+ K D W+ GV +Y M G PF + + + K I+S FP + S + K L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK----IVSGKVRFPSH--FSSDLKDL 268
Query: 237 LSRIFVANSEKRI-----TIPEIKNHPWF 260
L + + KR + +IKNH WF
Sbjct: 269 LRNLLQVDLTKRFGNLKDGVNDIKNHKWF 297
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/268 (34%), Positives = 142/268 (52%), Gaps = 18/268 (6%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKI-DEHVQREIMNHRSL---- 55
+E +E+ K +G G+FG L K T + A+K +++ + D+ V+ ++ R L
Sbjct: 17 IEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW 76
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCH 115
+HP + T +L VMEY GG+L I + +F A F+ ++I G+ + H
Sbjct: 77 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLH 136
Query: 116 SMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVL-HSQPKSTVGTPAYIAPEVLTKK 174
S I +RDLKL+N LLD +KI DFG K ++L ++ GTP YIAPE+L +
Sbjct: 137 SKGIVYRDLKLDNILLDKDG--HIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQ 194
Query: 175 EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVR-VSLEC 233
+Y+ + D WS GV LY ML+G PF ++ + F S+ P Y R + E
Sbjct: 195 KYNHSV-DWWSFGVLLYEMLIGQSPFHGQDEEELFH-------SIRMDNPFYPRWLEKEA 246
Query: 234 KHLLSRIFVANSEKRITI-PEIKNHPWF 260
K LL ++FV EKR+ + +I+ HP F
Sbjct: 247 KDLLVKLFVREPEKRLGVRGDIRQHPLF 274
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/271 (33%), Positives = 136/271 (50%), Gaps = 19/271 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKI-DEHVQREIMNHRSL---K 56
M ++ +K +G G FG LVR+K T A+K + + I + V + R L +
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HP + K T L VMEYA GGELF + F+E+ ARF+ +++S + Y HS
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLTKKE 175
+ +RD+KLEN +LD +KI DFG K + + K+ GTP Y+APEVL +
Sbjct: 124 RDVVYRDIKLENLMLDKDG--HIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDND 181
Query: 176 YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKH 235
Y G+ D W GV +Y M+ G PF + + + F IL FP +S E K
Sbjct: 182 Y-GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE----LILMEEIRFPR--TLSPEAKS 234
Query: 236 LLSRIFVANSEKRI-----TIPEIKNHPWFL 261
LL+ + + ++R+ E+ H +FL
Sbjct: 235 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFFL 265
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 143/269 (53%), Gaps = 20/269 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID----EHVQREIMNHRSLK 56
+++++ +K +G+G+FG LV+ K + A+K +++ + + EH E +++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
P +V+ + ++L +VMEY AGGE+F + GRFSE ARF+ Q++ Y HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
+ + +RDLK EN L+D +++ DFG++K + + GTP Y+APE++ K Y
Sbjct: 160 LDLIYRDLKPENLLIDQQGY--IQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
+ K D W+ GV +Y M G PF E + + K I+S FP + S + K L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADEPIQIYEK----IVSGKVRFPSH--FSSDLKDL 268
Query: 237 LSRIFVANSEKRI-----TIPEIKNHPWF 260
L + + KR + +IKNH WF
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 142/269 (52%), Gaps = 20/269 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID----EHVQREIMNHRSLK 56
++++E +K +G+G+FG LV+ K T A+K +++ + + EH E +++
Sbjct: 61 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
P +V+ + ++L +VMEY GGE+F + GRFSE ARF+ Q++ Y HS
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 180
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
+ + +RDLK EN L+D +++ DFG++K + + GTP Y+APE++ K Y
Sbjct: 181 LDLIYRDLKPENLLIDQQGY--IQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 236
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
+ K D W+ GV +Y M G PF + + + K I+S FP + S + K L
Sbjct: 237 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK----IVSGKVRFPSH--FSSDLKDL 289
Query: 237 LSRIFVANSEKRI-----TIPEIKNHPWF 260
L + + KR + +IKNH WF
Sbjct: 290 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 318
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/271 (33%), Positives = 136/271 (50%), Gaps = 19/271 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKI-DEHVQREIMNHRSL---K 56
M ++ +K +G G FG LVR+K T A+K + + I + V + R L +
Sbjct: 7 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 66
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HP + K T L VMEYA GGELF + F+E+ ARF+ +++S + Y HS
Sbjct: 67 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 126
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLTKKE 175
+ +RD+KLEN +LD +KI DFG K + + K+ GTP Y+APEVL +
Sbjct: 127 RDVVYRDIKLENLMLDKDG--HIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDND 184
Query: 176 YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKH 235
Y G+ D W GV +Y M+ G PF + + + F IL FP +S E K
Sbjct: 185 Y-GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE----LILMEEIRFPR--TLSPEAKS 237
Query: 236 LLSRIFVANSEKRI-----TIPEIKNHPWFL 261
LL+ + + ++R+ E+ H +FL
Sbjct: 238 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFFL 268
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/271 (33%), Positives = 136/271 (50%), Gaps = 19/271 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKI-DEHVQREIMNHRSL---K 56
M ++ +K +G G FG LVR+K T A+K + + I + V + R L +
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HP + K T L VMEYA GGELF + F+E+ ARF+ +++S + Y HS
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLTKKE 175
+ +RD+KLEN +LD +KI DFG K + + K+ GTP Y+APEVL +
Sbjct: 124 RDVVYRDIKLENLMLDKDG--HIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDND 181
Query: 176 YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKH 235
Y G+ D W GV +Y M+ G PF + + + F IL FP +S E K
Sbjct: 182 Y-GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE----LILMEEIRFPR--TLSPEAKS 234
Query: 236 LLSRIFVANSEKRI-----TIPEIKNHPWFL 261
LL+ + + ++R+ E+ H +FL
Sbjct: 235 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFFL 265
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 143/269 (53%), Gaps = 20/269 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID----EHVQREIMNHRSLK 56
+++++ +K +G+G+FG LV+ K + A+K +++ + + EH E +++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
P +V+ + ++L +VMEY AGGE+F + GRFSE ARF+ Q++ Y HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
+ + +RDLK EN L+D +++ DFG++K + + GTP Y+APE++ K Y
Sbjct: 160 LDLIYRDLKPENLLIDQQGY--IQVTDFGFAKR--VKGRTWXLAGTPEYLAPEIILSKGY 215
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
+ K D W+ GV +Y M G PF + + + K I+S FP + S + K L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK----IVSGKVRFPSH--FSSDLKDL 268
Query: 237 LSRIFVANSEKRI-----TIPEIKNHPWF 260
L + + KR + +IKNH WF
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 143/269 (53%), Gaps = 20/269 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID----EHVQREIMNHRSLK 56
+++++ +K +G+G+FG LV+ K + A+K +++ + + EH E +++
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
P +V+ + ++L +VMEY AGGE+F + GRFSE ARF+ Q++ Y HS
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 180
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
+ + +RDLK EN L+D +++ DFG++K + + GTP Y+APE++ K Y
Sbjct: 181 LDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGATWTLCGTPEYLAPEIILSKGY 236
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
+ K D W+ GV +Y M G PF + + + K I+S FP + S + K L
Sbjct: 237 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK----IVSGKVRFPSH--FSSDLKDL 289
Query: 237 LSRIFVANSEKRI-----TIPEIKNHPWF 260
L + + KR + +IKNH WF
Sbjct: 290 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 318
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 141/269 (52%), Gaps = 20/269 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID----EHVQREIMNHRSLK 56
++++E +K IG+G+FG LV+ T A+K +++ + + EH E +++
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
P +V+ + ++L +VMEY GGE+F + GRFSE ARF+ Q++ Y HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
+ + +RDLK EN L+D +K+ DFG++K + + GTP Y+APE++ K Y
Sbjct: 160 LDLIYRDLKPENLLIDQQGY--IKVADFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
+ K D W+ GV +Y M G PF + + + K I+S FP + S + K L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK----IVSGKVRFPSH--FSSDLKDL 268
Query: 237 LSRIFVANSEKRI-----TIPEIKNHPWF 260
L + + KR + +IKNH WF
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 142/269 (52%), Gaps = 20/269 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID----EHVQREIMNHRSLK 56
++++E +K +G+G+FG LV+ K T A+K +++ + + EH E +++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
P +V+ + ++L +VMEY GGE+F + GRFSE ARF+ Q++ Y HS
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
+ + +RDLK EN L+D +++ DFG++K + + GTP Y+APE++ K Y
Sbjct: 161 LDLIYRDLKPENLLIDQQGY--IQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
+ K D W+ GV +Y M G PF + + + K I+S FP + S + K L
Sbjct: 217 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK----IVSGKVRFPSH--FSSDLKDL 269
Query: 237 LSRIFVANSEKRI-----TIPEIKNHPWF 260
L + + KR + +IKNH WF
Sbjct: 270 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 142/269 (52%), Gaps = 20/269 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID----EHVQREIMNHRSLK 56
++++E +K +G+G+FG LV+ K T A+K +++ + + EH E +++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
P +V+ + ++L +VMEY GGE+F + GRFSE ARF+ Q++ Y HS
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
+ + +RDLK EN L+D +++ DFG++K + + GTP Y+APE++ K Y
Sbjct: 161 LDLIYRDLKPENLLIDQQGY--IQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
+ K D W+ GV +Y M G PF + + + K I+S FP + S + K L
Sbjct: 217 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK----IVSGKVRFPSH--FSSDLKDL 269
Query: 237 LSRIFVANSEKRI-----TIPEIKNHPWF 260
L + + KR + +IKNH WF
Sbjct: 270 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 142/269 (52%), Gaps = 20/269 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID----EHVQREIMNHRSLK 56
++++E +K +G+G+FG LV+ K T A+K +++ + + EH E +++
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 92
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
P +V+ + ++L +VMEY GGE+F + GRFSE ARF+ Q++ Y HS
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 152
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
+ + +RDLK EN L+D +++ DFG++K + + GTP Y+APE++ K Y
Sbjct: 153 LDLIYRDLKPENLLIDQQGY--IQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 208
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
+ K D W+ GV +Y M G PF + + + K I+S FP + S + K L
Sbjct: 209 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK----IVSGKVRFPSH--FSSDLKDL 261
Query: 237 LSRIFVANSEKRI-----TIPEIKNHPWF 260
L + + KR + +IKNH WF
Sbjct: 262 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 290
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 143/269 (53%), Gaps = 20/269 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID----EHVQREIMNHRSLK 56
+++++ +K +G+G+FG LV+ K + A+K +++ + + EH E +++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
P +V+ + ++L +VMEY AGGE+F + GRFSE ARF+ Q++ Y HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
+ + +RDLK EN L+D +++ DFG++K + + GTP Y+APE++ K Y
Sbjct: 160 LDLIYRDLKPENLLIDQQGY--IQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
+ K D W+ GV +Y M G PF + + + K I+S FP + S + K L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK----IVSGKVRFPSH--FSSDLKDL 268
Query: 237 LSRIFVANSEKRI-----TIPEIKNHPWF 260
L + + KR + +IKNH WF
Sbjct: 269 LRNLLQVDLTKRFGNLPNGVNDIKNHKWF 297
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 143/269 (53%), Gaps = 20/269 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID----EHVQREIMNHRSLK 56
+++++ +K +G+G+FG LV+ K + A+K +++ + + EH E +++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
P +V+ + ++L +VMEY AGGE+F + GRFSE ARF+ Q++ Y HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
+ + +RDLK EN L+D +++ DFG++K + + GTP Y+APE++ K Y
Sbjct: 160 LDLIYRDLKPENLLIDQQGY--IQVTDFGFAKR--VKGRTWXLXGTPEYLAPEIILSKGY 215
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
+ K D W+ GV +Y M G PF + + + K I+S FP + S + K L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK----IVSGKVRFPSH--FSSDLKDL 268
Query: 237 LSRIFVANSEKRI-----TIPEIKNHPWF 260
L + + KR + +IKNH WF
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 142/269 (52%), Gaps = 20/269 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID----EHVQREIMNHRSLK 56
++++E +K +G+G+FG LV+ T A+K +++ + + EH E +++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
P +V+ + ++L +VMEYA GGE+F + GRFSE ARF+ Q++ Y HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
+ + +RDLK EN ++D +K+ DFG++K + + GTP Y+APE++ K Y
Sbjct: 160 LDLIYRDLKPENLMIDQQGY--IKVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
+ K D W+ GV +Y M G PF + + + K I+S FP + S + K L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK----IVSGKVRFPSH--FSSDLKDL 268
Query: 237 LSRIFVANSEKRI-----TIPEIKNHPWF 260
L + + KR + +IKNH WF
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 139/269 (51%), Gaps = 15/269 (5%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQK----IDEHVQREIMNHRSLK 56
+E +++ +G G+F T +A+K I++ + + VQ E+ H LK
Sbjct: 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLK 69
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGR-FSEDEARFFFQQLISGVSYCH 115
HP+I+ ++ +V+E GE+ + N + FSE+EAR F Q+I+G+ Y H
Sbjct: 70 HPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH 129
Query: 116 SMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVL-HSQPKSTVGTPAYIAPEVLTKK 174
S I HRDL L N LL + +KI DFG + + H + + GTP YI+PE+ T+
Sbjct: 130 SHGILHRDLTLSNLLLTRNM--NIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRS 187
Query: 175 EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECK 234
+ G +DVWS G Y +L+G PF D + T+ +++ Y P + +S+E K
Sbjct: 188 AH-GLESDVWSLGCMFYTLLIGRPPF----DTDTVKNTLNKVVLADYEMPSF--LSIEAK 240
Query: 235 HLLSRIFVANSEKRITIPEIKNHPWFLRN 263
L+ ++ N R+++ + +HP+ RN
Sbjct: 241 DLIHQLLRRNPADRLSLSSVLDHPFMSRN 269
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 143/269 (53%), Gaps = 20/269 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID----EHVQREIMNHRSLK 56
+++++ +K +G+G+FG LV+ K + A+K +++ + + EH E +++
Sbjct: 41 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
P +V+ + ++L +VMEY AGGE+F + GRFSE ARF+ Q++ Y HS
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
+ + +RDLK EN L+D +++ DFG++K + + GTP Y+APE++ K Y
Sbjct: 161 LDLIYRDLKPENLLIDQQGY--IQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
+ K D W+ GV +Y M G PF + + + K I+S FP + S + K L
Sbjct: 217 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK----IVSGKVRFPSH--FSSDLKDL 269
Query: 237 LSRIFVANSEKRI-----TIPEIKNHPWF 260
L + + KR + +IKNH WF
Sbjct: 270 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 142/269 (52%), Gaps = 20/269 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID----EHVQREIMNHRSLK 56
++++E +K +G+G+FG LV+ T A+K +++ + + EH E +++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
P +V+ + ++L +VMEY AGGE+F + GRFSE ARF+ Q++ Y HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
+ + +RDLK EN L+D +++ DFG++K + + GTP Y+APE++ K Y
Sbjct: 160 LDLIYRDLKPENLLIDQQGY--IQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
+ K D W+ GV +Y M G PF + + + K I+S FP + S + K L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK----IVSGKVRFPSH--FSSDLKDL 268
Query: 237 LSRIFVANSEKRI-----TIPEIKNHPWF 260
L + + KR + +IKNH WF
Sbjct: 269 LRNLLQVDLTKRFGNLKDGVNDIKNHKWF 297
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 143/269 (53%), Gaps = 20/269 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID----EHVQREIMNHRSLK 56
+++++ +K +G+G+FG LV+ K + A+K +++ + + EH E +++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
P +V+ + ++L +VMEY AGGE+F + GRFSE ARF+ Q++ Y HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
+ + +RDLK EN L+D +++ DFG++K + + GTP Y+APE++ K Y
Sbjct: 160 LDLIYRDLKPENLLIDQQGY--IQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
+ K D W+ GV +Y M G PF + + + K I+S FP + S + K L
Sbjct: 216 N-KAVDWWALGVLIYQMAAGYPPFFADQPIQIYEK----IVSGKVRFPSH--FSSDLKDL 268
Query: 237 LSRIFVANSEKRI-----TIPEIKNHPWF 260
L + + KR + +IKNH WF
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/271 (33%), Positives = 135/271 (49%), Gaps = 19/271 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKI-DEHVQREIMNHRSL---K 56
M ++ +K +G G FG LVR+K T A+K + + I + V + R L +
Sbjct: 9 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 68
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HP + K T L VMEYA GGELF + F+E+ ARF+ +++S + Y HS
Sbjct: 69 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 128
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLTKKE 175
+ +RD+KLEN +LD +KI DFG K + + K GTP Y+APEVL +
Sbjct: 129 RDVVYRDIKLENLMLDKDG--HIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDND 186
Query: 176 YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKH 235
Y G+ D W GV +Y M+ G PF + + + F IL FP +S E K
Sbjct: 187 Y-GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE----LILMEEIRFPR--TLSPEAKS 239
Query: 236 LLSRIFVANSEKRI-----TIPEIKNHPWFL 261
LL+ + + ++R+ E+ H +FL
Sbjct: 240 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFFL 270
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/271 (33%), Positives = 135/271 (49%), Gaps = 19/271 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKI-DEHVQREIMNHRSL---K 56
M ++ +K +G G FG LVR+K T A+K + + I + V + R L +
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HP + K T L VMEYA GGELF + F+E+ ARF+ +++S + Y HS
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLTKKE 175
+ +RD+KLEN +LD +KI DFG K + + K GTP Y+APEVL +
Sbjct: 124 RDVVYRDIKLENLMLDKDG--HIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDND 181
Query: 176 YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKH 235
Y G+ D W GV +Y M+ G PF + + + F IL FP +S E K
Sbjct: 182 Y-GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE----LILMEEIRFPR--TLSPEAKS 234
Query: 236 LLSRIFVANSEKRI-----TIPEIKNHPWFL 261
LL+ + + ++R+ E+ H +FL
Sbjct: 235 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFFL 265
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 94/267 (35%), Positives = 141/267 (52%), Gaps = 17/267 (6%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRF 63
YE+ +DIG G++ V K K T AVK I++ ++ D + EI+ R +HPNI+
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR-DPTEEIEIL-LRYGQHPNIITL 81
Query: 64 KEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICHRD 123
K+V ++ +V E GGEL ++I FSE EA + V Y H+ + HRD
Sbjct: 82 KDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRD 141
Query: 124 LKLENTL-LDGSTAPR-VKICDFGYSKSSVLHSQPKSTVGTPAY----IAPEVLTKKEYD 177
LK N L +D S P ++ICDFG++K L ++ + TP Y +APEVL ++ YD
Sbjct: 142 LKPSNILYVDESGNPESIRICDFGFAKQ--LRAE-NGLLMTPCYTANFVAPEVLERQGYD 198
Query: 178 GKIADVWSCGVTLYVMLVGAYPFED-PEDPKNFRKTIGRILSVHYSFPD--YVRVSLECK 234
D+WS GV LY ML G PF + P+D + + RI S +S + VS K
Sbjct: 199 AA-CDIWSLGVLLYTMLTGYTPFANGPDDTP--EEILARIGSGKFSLSGGYWNSVSDTAK 255
Query: 235 HLLSRIFVANSEKRITIPEIKNHPWFL 261
L+S++ + +R+T + HPW +
Sbjct: 256 DLVSKMLHVDPHQRLTAALVLRHPWIV 282
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 143/269 (53%), Gaps = 20/269 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID----EHVQREIMNHRSLK 56
+++++ +K +G+G+FG LV+ K + A+K +++ + + EH E +++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
P +V+ + ++L +VMEY AGGE+F + GRFSE ARF+ Q++ Y HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
+ + +RDLK EN L+D +++ DFG++K + + GTP Y+APE++ K Y
Sbjct: 160 LDLIYRDLKPENLLIDQQGY--IQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
+ K D W+ GV +Y M G PF + + + K I+S FP + S + K L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK----IVSGKVRFPSH--FSSDLKDL 268
Query: 237 LSRIFVANSEKRI-----TIPEIKNHPWF 260
L + + KR + +IKNH WF
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 135 bits (339), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 143/269 (53%), Gaps = 20/269 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID----EHVQREIMNHRSLK 56
+++++ +K +G+G+FG LV+ K + A+K +++ + + EH E +++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
P +V+ + ++L +VMEY AGGE+F + GRFSE ARF+ Q++ Y HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
+ + +RDLK EN L+D +++ DFG++K + + GTP Y+APE++ K Y
Sbjct: 160 LDLIYRDLKPENLLIDQQGY--IQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
+ K D W+ GV +Y M G PF + + + K I+S FP + S + K L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK----IVSGKVRFPSH--FSSDLKDL 268
Query: 237 LSRIFVANSEKRI-----TIPEIKNHPWF 260
L + + KR + +IKNH WF
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 134 bits (338), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 91/271 (33%), Positives = 135/271 (49%), Gaps = 19/271 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKI-DEHVQREIMNHRSL---K 56
M ++ +K +G G FG LVR+K T A+K + + I + V + R L +
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HP + K T L VMEYA GGELF + F+E+ ARF+ +++S + Y HS
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLTKKE 175
+ +RD+KLEN +LD +KI DFG K + + K GTP Y+APEVL +
Sbjct: 124 RDVVYRDIKLENLMLDKDG--HIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDND 181
Query: 176 YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKH 235
Y G+ D W GV +Y M+ G PF + + + F IL FP +S E K
Sbjct: 182 Y-GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE----LILMEEIRFPR--TLSPEAKS 234
Query: 236 LLSRIFVANSEKRI-----TIPEIKNHPWFL 261
LL+ + + ++R+ E+ H +FL
Sbjct: 235 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFFL 265
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 134 bits (338), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 91/271 (33%), Positives = 135/271 (49%), Gaps = 19/271 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKI-DEHVQREIMNHRSL---K 56
M ++ +K +G G FG LVR+K T A+K + + I + V + R L +
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HP + K T L VMEYA GGELF + F+E+ ARF+ +++S + Y HS
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLTKKE 175
+ +RD+KLEN +LD +KI DFG K + + K GTP Y+APEVL +
Sbjct: 124 RDVVYRDIKLENLMLDKDG--HIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDND 181
Query: 176 YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKH 235
Y G+ D W GV +Y M+ G PF + + + F IL FP +S E K
Sbjct: 182 Y-GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE----LILMEEIRFPR--TLSPEAKS 234
Query: 236 LLSRIFVANSEKRI-----TIPEIKNHPWFL 261
LL+ + + ++R+ E+ H +FL
Sbjct: 235 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFFL 265
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 134 bits (338), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 143/269 (53%), Gaps = 20/269 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID----EHVQREIMNHRSLK 56
+++++ +K +G+G+FG LV+ K + A+K +++ + + EH E +++
Sbjct: 27 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 86
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
P +V+ + ++L +VMEY AGGE+F + GRFSE ARF+ Q++ Y HS
Sbjct: 87 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 146
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
+ + +RDLK EN L+D +++ DFG++K + + GTP Y+APE++ K Y
Sbjct: 147 LDLIYRDLKPENLLIDEQGY--IQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 202
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
+ K D W+ GV +Y M G PF + + + K I+S FP + S + K L
Sbjct: 203 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK----IVSGKVRFPSH--FSSDLKDL 255
Query: 237 LSRIFVANSEKRI-----TIPEIKNHPWF 260
L + + KR + +IKNH WF
Sbjct: 256 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 284
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 134 bits (338), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 132/264 (50%), Gaps = 9/264 (3%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID-EHVQREIMNHRSLKHPN 59
++ Y+I +++G+G FGV V ++ T A KF+ + D E V++EI L+HP
Sbjct: 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPT 215
Query: 60 IVRFKEVLLTPTHLAIVMEYAAGGELFERICNA-GRFSEDEARFFFQQLISGVSYCHSMQ 118
+V + + ++ E+ +GGELFE++ + + SEDEA + +Q+ G+ + H
Sbjct: 216 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN 275
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDG 178
H DLK EN + + +K+ DFG + K T GT + APEV K G
Sbjct: 276 YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPV-G 334
Query: 179 KIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPD--YVRVSLECKHL 236
D+WS GV Y++L G PF D + R + S ++ D + +S + K
Sbjct: 335 YYTDMWSVGVLSYILLSGLSPFGGENDDETLRN----VKSCDWNMDDSAFSGISEDGKDF 390
Query: 237 LSRIFVANSEKRITIPEIKNHPWF 260
+ ++ +A+ R+TI + HPW
Sbjct: 391 IRKLLLADPNTRMTIHQALEHPWL 414
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 134 bits (337), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 132/264 (50%), Gaps = 9/264 (3%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID-EHVQREIMNHRSLKHPN 59
++ Y+I +++G+G FGV V ++ T A KF+ + D E V++EI L+HP
Sbjct: 50 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPT 109
Query: 60 IVRFKEVLLTPTHLAIVMEYAAGGELFERICNA-GRFSEDEARFFFQQLISGVSYCHSMQ 118
+V + + ++ E+ +GGELFE++ + + SEDEA + +Q+ G+ + H
Sbjct: 110 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN 169
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDG 178
H DLK EN + + +K+ DFG + K T GT + APEV K G
Sbjct: 170 YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPV-G 228
Query: 179 KIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPD--YVRVSLECKHL 236
D+WS GV Y++L G PF D + R + S ++ D + +S + K
Sbjct: 229 YYTDMWSVGVLSYILLSGLSPFGGENDDETLRN----VKSCDWNMDDSAFSGISEDGKDF 284
Query: 237 LSRIFVANSEKRITIPEIKNHPWF 260
+ ++ +A+ R+TI + HPW
Sbjct: 285 IRKLLLADPNTRMTIHQALEHPWL 308
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 134 bits (337), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 137/271 (50%), Gaps = 20/271 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKI-DEHVQREIMNHRSL---K 56
M +E +K +G G FG LV++K T A+K +++ + + V + +R L +
Sbjct: 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 206
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HP + K T L VMEYA GGELF + FSED ARF+ +++S + Y HS
Sbjct: 207 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHS 266
Query: 117 MQ-ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLTKK 174
+ + +RDLKLEN +LD +KI DFG K + + K+ GTP Y+APEVL
Sbjct: 267 EKNVVYRDLKLENLMLDKDG--HIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDN 324
Query: 175 EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECK 234
+Y G+ D W GV +Y M+ G PF + + K F IL FP + E K
Sbjct: 325 DY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE----LILMEEIRFPR--TLGPEAK 377
Query: 235 HLLSRIFVANSEKRI-----TIPEIKNHPWF 260
LLS + + ++R+ EI H +F
Sbjct: 378 SLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 408
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 134 bits (337), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 143/269 (53%), Gaps = 20/269 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID----EHVQREIMNHRSLK 56
+++++ +K +G+G+FG LV+ K + A+K +++ + + EH E +++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
P +V+ + ++L +VMEY AGGE+F + GRFSE ARF+ Q++ Y HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
+ + +RDLK EN ++D +++ DFG++K + + GTP Y+APE++ K Y
Sbjct: 160 LDLIYRDLKPENLIIDQQGY--IQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIIISKGY 215
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
+ K D W+ GV +Y M G PF + + + K I+S FP + S + K L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK----IVSGKVRFPSH--FSSDLKDL 268
Query: 237 LSRIFVANSEKRI-----TIPEIKNHPWF 260
L + + KR + +IKNH WF
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 134 bits (337), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 141/269 (52%), Gaps = 20/269 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID----EHVQREIMNHRSLK 56
++++E +K IG+G+FG LV+ T A+K +++ + + EH E +++
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
P +V+ + ++L +VMEY GG++F + GRFSE ARF+ Q++ Y HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
+ + +RDLK EN L+D +K+ DFG++K + + GTP Y+APE++ K Y
Sbjct: 160 LDLIYRDLKPENLLIDQQGY--IKVADFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
+ K D W+ GV +Y M G PF + + + K I+S FP + S + K L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK----IVSGKVRFPSH--FSSDLKDL 268
Query: 237 LSRIFVANSEKRI-----TIPEIKNHPWF 260
L + + KR + +IKNH WF
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 134 bits (337), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 142/269 (52%), Gaps = 20/269 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID----EHVQREIMNHRSLK 56
++++E +K +G+G+FG LV+ T A+K +++ + + EH E +++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
P +V+ + ++L +VMEYA GGE+F + GRFSE ARF+ Q++ Y HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
+ + +RDLK EN ++D +++ DFG++K + + GTP Y+APE++ K Y
Sbjct: 160 LDLIYRDLKPENLMIDQQGY--IQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
+ K D W+ GV +Y M G PF + + + K I+S FP + S + K L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK----IVSGKVRFPSH--FSSDLKDL 268
Query: 237 LSRIFVANSEKRI-----TIPEIKNHPWF 260
L + + KR + +IKNH WF
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 134 bits (337), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 137/271 (50%), Gaps = 20/271 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKI-DEHVQREIMNHRSL---K 56
M +E +K +G G FG LV++K T A+K +++ + + V + +R L +
Sbjct: 150 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 209
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HP + K T L VMEYA GGELF + FSED ARF+ +++S + Y HS
Sbjct: 210 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHS 269
Query: 117 MQ-ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLTKK 174
+ + +RDLKLEN +LD +KI DFG K + + K+ GTP Y+APEVL
Sbjct: 270 EKNVVYRDLKLENLMLDKDG--HIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDN 327
Query: 175 EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECK 234
+Y G+ D W GV +Y M+ G PF + + K F IL FP + E K
Sbjct: 328 DY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE----LILMEEIRFPR--TLGPEAK 380
Query: 235 HLLSRIFVANSEKRI-----TIPEIKNHPWF 260
LLS + + ++R+ EI H +F
Sbjct: 381 SLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 411
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 134 bits (337), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 136/271 (50%), Gaps = 20/271 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKI-DEHVQREIMNHRSL---K 56
M +E +K +G G FG LV++K T A+K +++ + + V + +R L +
Sbjct: 7 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 66
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HP + K T L VMEYA GGELF + FSED ARF+ +++S + Y HS
Sbjct: 67 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHS 126
Query: 117 MQ-ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLTKK 174
+ + +RDLKLEN +LD +KI DFG K + + K GTP Y+APEVL
Sbjct: 127 EKNVVYRDLKLENLMLDKDG--HIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDN 184
Query: 175 EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECK 234
+Y G+ D W GV +Y M+ G PF + + K F IL FP + E K
Sbjct: 185 DY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE----LILMEEIRFPR--TLGPEAK 237
Query: 235 HLLSRIFVANSEKRI-----TIPEIKNHPWF 260
LLS + + ++R+ EI H +F
Sbjct: 238 SLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 268
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 134 bits (337), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 142/269 (52%), Gaps = 20/269 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID----EHVQREIMNHRSLK 56
++++E +K +G+G+FG LV+ T A+K +++ + + EH E +++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
P +V+ + ++L +VMEY GGE+F + GRFSE ARF+ Q++ Y HS
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
+ + +RDLK EN L+D +++ DFG++K + + + GTP Y+APE++ K Y
Sbjct: 161 LDLIYRDLKPENLLIDQQGY--IQVTDFGFAKR--VKGRTWTLCGTPEYLAPEIILSKGY 216
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
+ K D W+ GV +Y M G PF + + + K I+S FP + S + K L
Sbjct: 217 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK----IVSGKVRFPSH--FSSDLKDL 269
Query: 237 LSRIFVANSEKRI-----TIPEIKNHPWF 260
L + + KR + +IKNH WF
Sbjct: 270 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 134 bits (336), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 141/269 (52%), Gaps = 20/269 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID----EHVQREIMNHRSLK 56
++++E +K IG+G+FG LV+ T A+K +++ + + EH E +++
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
P +V+ + ++L +VMEY GG++F + GRFSE ARF+ Q++ Y HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
+ + +RDLK EN L+D +K+ DFG++K + + GTP Y+APE++ K Y
Sbjct: 160 LDLIYRDLKPENLLIDQQGY--IKVADFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
+ K D W+ GV +Y M G PF + + + K I+S FP + S + K L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK----IVSGKVRFPSH--FSSDLKDL 268
Query: 237 LSRIFVANSEKRI-----TIPEIKNHPWF 260
L + + KR + +IKNH WF
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 134 bits (336), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 143/269 (53%), Gaps = 20/269 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID----EHVQREIMNHRSLK 56
+++++ +K +G+G+FG LV+ K + A+K +++ + + EH E +++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
P +V+ + ++L +VMEY AGGE+F + GRF+E ARF+ Q++ Y HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHS 159
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
+ + +RDLK EN L+D +++ DFG++K + + GTP Y+APE++ K Y
Sbjct: 160 LDLIYRDLKPENLLIDQQGY--IQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
+ K D W+ GV +Y M G PF + + + K I+S FP + S + K L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK----IVSGKVRFPSH--FSSDLKDL 268
Query: 237 LSRIFVANSEKRI-----TIPEIKNHPWF 260
L + + KR + +IKNH WF
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 134 bits (336), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 141/269 (52%), Gaps = 20/269 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID----EHVQREIMNHRSLK 56
++++E +K +G+G+FG LV+ T A+K +++ + + EH E +++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
P + + + ++L +VMEYA GGE+F + GRFSE ARF+ Q++ Y HS
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
+ + +RDLK EN ++D +K+ DFG++K + + GTP Y+APE++ K Y
Sbjct: 161 LDLIYRDLKPENLMIDQQGY--IKVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
+ K D W+ GV +Y M G PF + + + K I+S FP + S + K L
Sbjct: 217 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK----IVSGKVRFPSH--FSSDLKDL 269
Query: 237 LSRIFVANSEKRI-----TIPEIKNHPWF 260
L + + KR + +IKNH WF
Sbjct: 270 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 142/269 (52%), Gaps = 20/269 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID----EHVQREIMNHRSLK 56
++++E +K +G+G+FG LV+ T A+K +++ + + EH E +++
Sbjct: 26 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 85
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
P +V+ + ++L +VMEY GGE+F + GRFSE ARF+ Q++ Y HS
Sbjct: 86 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 145
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
+ + +RDLK EN L+D +++ DFG++K + + + GTP Y+APE++ K Y
Sbjct: 146 LDLIYRDLKPENLLIDQQGY--IQVTDFGFAKR--VKGRTWTLCGTPEYLAPEIILSKGY 201
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
+ K D W+ GV +Y M G PF + + + K I+S FP + S + K L
Sbjct: 202 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK----IVSGKVRFPSH--FSSDLKDL 254
Query: 237 LSRIFVANSEKRI-----TIPEIKNHPWF 260
L + + KR + +IKNH WF
Sbjct: 255 LRNLLQVDLTKRFGNLKDGVNDIKNHKWF 283
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 136/271 (50%), Gaps = 20/271 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKI-DEHVQREIMNHRSL---K 56
M +E +K +G G FG LV++K T A+K +++ + + V + +R L +
Sbjct: 8 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 67
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HP + K T L VMEYA GGELF + FSED ARF+ +++S + Y HS
Sbjct: 68 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHS 127
Query: 117 MQ-ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLTKK 174
+ + +RDLKLEN +LD +KI DFG K + + K GTP Y+APEVL
Sbjct: 128 EKNVVYRDLKLENLMLDKDG--HIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDN 185
Query: 175 EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECK 234
+Y G+ D W GV +Y M+ G PF + + K F IL FP + E K
Sbjct: 186 DY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE----LILMEEIRFPR--TLGPEAK 238
Query: 235 HLLSRIFVANSEKRI-----TIPEIKNHPWF 260
LLS + + ++R+ EI H +F
Sbjct: 239 SLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 269
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 141/269 (52%), Gaps = 20/269 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID----EHVQREIMNHRSLK 56
++++E +K +G+G+FG LV+ T A+K +++ + + EH E +++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
P + + + ++L +VMEYA GGE+F + GRFSE ARF+ Q++ Y HS
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
+ + +RDLK EN ++D +K+ DFG++K + + GTP Y+APE++ K Y
Sbjct: 161 LDLIYRDLKPENLMIDQQGY--IKVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
+ K D W+ GV +Y M G PF + + + K I+S FP + S + K L
Sbjct: 217 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK----IVSGKVRFPSH--FSSDLKDL 269
Query: 237 LSRIFVANSEKRI-----TIPEIKNHPWF 260
L + + KR + +IKNH WF
Sbjct: 270 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 142/269 (52%), Gaps = 20/269 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID----EHVQREIMNHRSLK 56
+++++ +K +G+G+FG LV+ K + A+K +++ + + EH E +++
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
P +V+ + ++L +VMEY AGGE+F + GRF E ARF+ Q++ Y HS
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 180
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
+ + +RDLK EN L+D +++ DFG++K + + GTP Y+APE++ K Y
Sbjct: 181 LDLIYRDLKPENLLID--QQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 236
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
+ K D W+ GV +Y M G PF + + + K I+S FP + S + K L
Sbjct: 237 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK----IVSGKVRFPSH--FSSDLKDL 289
Query: 237 LSRIFVANSEKRI-----TIPEIKNHPWF 260
L + + KR + +IKNH WF
Sbjct: 290 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 318
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 141/269 (52%), Gaps = 20/269 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID----EHVQREIMNHRSLK 56
++++E +K +G+G+FG LV+ K T A+K +++ + + EH E +++
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 92
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
P +V+ + ++L +VMEY GGE+F + GRF E ARF+ Q++ Y HS
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 152
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
+ + +RDLK EN L+D +++ DFG++K + + GTP Y+APE++ K Y
Sbjct: 153 LDLIYRDLKPENLLIDQQGY--IQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 208
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
+ K D W+ GV +Y M G PF + + + K I+S FP + S + K L
Sbjct: 209 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK----IVSGKVRFPSH--FSSDLKDL 261
Query: 237 LSRIFVANSEKRI-----TIPEIKNHPWF 260
L + + KR + +IKNH WF
Sbjct: 262 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 290
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 136/271 (50%), Gaps = 20/271 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKI-DEHVQREIMNHRSL---K 56
M +E +K +G G FG LV++K T A+K +++ + + V + +R L +
Sbjct: 9 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 68
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HP + K T L VMEYA GGELF + FSED ARF+ +++S + Y HS
Sbjct: 69 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHS 128
Query: 117 MQ-ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLTKK 174
+ + +RDLKLEN +LD +KI DFG K + + K GTP Y+APEVL
Sbjct: 129 EKNVVYRDLKLENLMLDKDG--HIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDN 186
Query: 175 EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECK 234
+Y G+ D W GV +Y M+ G PF + + K F IL FP + E K
Sbjct: 187 DY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE----LILMEEIRFPR--TLGPEAK 239
Query: 235 HLLSRIFVANSEKRI-----TIPEIKNHPWF 260
LLS + + ++R+ EI H +F
Sbjct: 240 SLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 270
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 141/269 (52%), Gaps = 20/269 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID----EHVQREIMNHRSLK 56
++++E +K +G+G+FG LV+ T A+K +++ + + EH E +++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
P +V+ + ++L +VMEYA GGE+F + GRFSE ARF+ Q++ Y HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
+ + +RDLK EN ++D +K+ DFG +K + + GTP Y+APE++ K Y
Sbjct: 160 LDLIYRDLKPENLMIDQQGY--IKVTDFGLAKR--VKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
+ K D W+ GV +Y M G PF + + + K I+S FP + S + K L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK----IVSGKVRFPSH--FSSDLKDL 268
Query: 237 LSRIFVANSEKRI-----TIPEIKNHPWF 260
L + + KR + +IKNH WF
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 141/269 (52%), Gaps = 20/269 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID----EHVQREIMNHRSLK 56
++++E +K +G+G+FG LV+ T A+K +++ + + EH E +++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
P +V+ + ++L +VMEYA GGE+F + GRF E ARF+ Q++ Y HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
+ + +RDLK EN ++D +K+ DFG++K + + GTP Y+APE++ K Y
Sbjct: 160 LDLIYRDLKPENLMIDQQGY--IKVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
+ K D W+ GV +Y M G PF + + + K I+S FP + S + K L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK----IVSGKVRFPSH--FSSDLKDL 268
Query: 237 LSRIFVANSEKRI-----TIPEIKNHPWF 260
L + + KR + +IKNH WF
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 141/269 (52%), Gaps = 20/269 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID----EHVQREIMNHRSLK 56
++++E +K +G+G+FG LV+ K T A+K +++ + + EH E +++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
P +V+ + ++L +VMEY GGE+F + GRFSE ARF+ Q++ Y HS
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
+ + +RDLK EN L+D +++ DFG++K + + GTP Y+APE++ K Y
Sbjct: 161 LDLIYRDLKPENLLIDQQGY--IQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
+ K D W+ GV +Y M G PF + + + K I+S FP + S + K L
Sbjct: 217 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK----IVSGKVRFPSH--FSSDLKDL 269
Query: 237 LSRIFVANSEKRI-----TIPEIKNHPWF 260
L + + KR + +I NH WF
Sbjct: 270 LRNLLQVDLTKRFGNLKNGVNDIXNHKWF 298
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 141/269 (52%), Gaps = 20/269 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID----EHVQREIMNHRSLK 56
++++E +K +G+G+FG LV+ T A+K +++ + + EH E +++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
P +V+ + ++L +VMEY GGE+F + GRFSE ARF+ Q++ Y HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
+ + +RDLK EN L+D +++ DFG++K + + GTP Y+APE++ K Y
Sbjct: 160 LDLIYRDLKPENLLIDQQGY--IQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
+ K D W+ GV +Y M G PF + + + K I+S FP + S + K L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK----IVSGKVRFPSH--FSSDLKDL 268
Query: 237 LSRIFVANSEKRI-----TIPEIKNHPWF 260
L + + KR + +IKNH WF
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 142/269 (52%), Gaps = 20/269 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID----EHVQREIMNHRSLK 56
+++++ +K +G+G+FG LV+ K + A+K +++ + + EH E +++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
P +V+ + ++L +VMEY AGGE+F + GRF E ARF+ Q++ Y HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
+ + +RDLK EN L+D +++ DFG++K + + GTP Y+APE++ K Y
Sbjct: 160 LDLIYRDLKPENLLIDQQGY--IQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
+ K D W+ GV +Y M G PF + + + K I+S FP + S + K L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK----IVSGKVRFPSH--FSSDLKDL 268
Query: 237 LSRIFVANSEKRI-----TIPEIKNHPWF 260
L + + KR + +IKNH WF
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 142/269 (52%), Gaps = 20/269 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID----EHVQREIMNHRSLK 56
+++++ +K +G+G+FG LV+ K + A+K +++ + + EH E +++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
P +V+ + ++L +VMEY AGGE+F + GRF E ARF+ Q++ Y HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
+ + +RDLK EN L+D +++ DFG++K + + GTP Y+APE++ K Y
Sbjct: 160 LDLIYRDLKPENLLIDQQGY--IQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
+ K D W+ GV +Y M G PF + + + K I+S FP + S + K L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK----IVSGKVRFPSH--FSSDLKDL 268
Query: 237 LSRIFVANSEKRI-----TIPEIKNHPWF 260
L + + KR + +IKNH WF
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 141/269 (52%), Gaps = 20/269 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID----EHVQREIMNHRSLK 56
++++E +K +G+G+FG LV+ T A+K +++ + + EH E +++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
P +V+ + ++L +VMEY GGE+F + GRFSE ARF+ Q++ Y HS
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
+ + +RDLK EN L+D +++ DFG++K + + GTP Y+APE++ K Y
Sbjct: 161 LDLIYRDLKPENLLIDQQGY--IQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
+ K D W+ GV +Y M G PF + + + K I+S FP + S + K L
Sbjct: 217 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK----IVSGKVRFPSH--FSSDLKDL 269
Query: 237 LSRIFVANSEKRI-----TIPEIKNHPWF 260
L + + KR + +IKNH WF
Sbjct: 270 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 142/269 (52%), Gaps = 20/269 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID----EHVQREIMNHRSLK 56
+++++ +K +G+G+FG LV+ K + A+K +++ + + EH E +++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
P +V+ + ++L +VMEY AGGE+F + GRF E ARF+ Q++ Y HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
+ + +RDLK EN L+D +++ DFG++K + + GTP Y+APE++ K Y
Sbjct: 160 LDLIYRDLKPENLLIDQQGY--IQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
+ K D W+ GV +Y M G PF + + + K I+S FP + S + K L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK----IVSGKVRFPSH--FSSDLKDL 268
Query: 237 LSRIFVANSEKRI-----TIPEIKNHPWF 260
L + + KR + +IKNH WF
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 141/269 (52%), Gaps = 20/269 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID----EHVQREIMNHRSLK 56
++++E +K +G+G+FG LV+ T A+K +++ + + EH E +++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
P +V+ + ++L +VMEY GGE+F + GRFSE ARF+ Q++ Y HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
+ + +RDLK EN L+D +++ DFG++K + + GTP Y+APE++ K Y
Sbjct: 160 LDLIYRDLKPENLLIDQQGY--IQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
+ K D W+ GV +Y M G PF + + + K I+S FP + S + K L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK----IVSGKVRFPSH--FSSDLKDL 268
Query: 237 LSRIFVANSEKRI-----TIPEIKNHPWF 260
L + + KR + +IKNH WF
Sbjct: 269 LRNLLQVDLTKRFGNLKDGVNDIKNHKWF 297
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 142/269 (52%), Gaps = 20/269 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID----EHVQREIMNHRSLK 56
+++++ +K +G+G+FG LV+ K + A+K +++ + + EH E +++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
P +V+ + ++L +VMEY AGGE+F + GRFSE ARF+ Q++ Y HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
+ + +RDLK EN L+D +++ DFG++K + + GTP Y+AP ++ K Y
Sbjct: 160 LDLIYRDLKPENLLIDQQGY--IQVTDFGFAKR--VKGRTWXLCGTPEYLAPAIILSKGY 215
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
+ K D W+ GV +Y M G PF + + + K I+S FP + S + K L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK----IVSGKVRFPSH--FSSDLKDL 268
Query: 237 LSRIFVANSEKRI-----TIPEIKNHPWF 260
L + + KR + +IKNH WF
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 142/269 (52%), Gaps = 20/269 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID----EHVQREIMNHRSLK 56
+++++ +K +G+G+FG LV+ K + A+K +++ + + EH E +++
Sbjct: 35 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 94
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
P +V+ + ++L +VMEY AGGE+F + GRF E ARF+ Q++ Y HS
Sbjct: 95 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 154
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
+ + +RDLK EN L+D +++ DFG++K + + GTP Y+APE++ K Y
Sbjct: 155 LDLIYRDLKPENLLIDQQGY--IQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 210
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
+ K D W+ GV +Y M G PF + + + K I+S FP + S + K L
Sbjct: 211 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK----IVSGKVRFPSH--FSSDLKDL 263
Query: 237 LSRIFVANSEKRI-----TIPEIKNHPWF 260
L + + KR + +IKNH WF
Sbjct: 264 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 292
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 141/269 (52%), Gaps = 20/269 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID----EHVQREIMNHRSLK 56
++++E +K +G+G+FG LV+ T A+K +++ + + EH E +++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
P +V+ + ++L +VMEY GGE+F + GRFSE ARF+ Q++ Y HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
+ + +RDLK EN L+D +++ DFG++K + + GTP Y+APE++ K Y
Sbjct: 160 LDLIYRDLKPENLLIDQQGY--IQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
+ K D W+ GV +Y M G PF + + + K I+S FP + S + K L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK----IVSGKVRFPSH--FSSDLKDL 268
Query: 237 LSRIFVANSEKRI-----TIPEIKNHPWF 260
L + + KR + +IKNH WF
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 140/271 (51%), Gaps = 17/271 (6%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNH-RSLKHPNIVR----FK 64
+G G G + +K T+E A+K ++ K +RE+ H R+ + P+IVR ++
Sbjct: 40 LGLGINGKVLQIFNKRTQEKFALKMLQDCPK----ARREVELHWRASQCPHIVRIVDVYE 95
Query: 65 EVLLTPTHLAIVMEYAAGGELFERICNAG--RFSEDEARFFFQQLISGVSYCHSMQICHR 122
+ L IVME GGELF RI + G F+E EA + + + Y HS+ I HR
Sbjct: 96 NLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHR 155
Query: 123 DLKLENTLLDGSTAPR--VKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKI 180
D+K EN LL S P +K+ DFG++K + H+ + TP Y+APEVL ++YD K
Sbjct: 156 DVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD-KS 213
Query: 181 ADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPD--YVRVSLECKHLLS 238
D+WS GV +Y++L G PF RI Y FP+ + VS E K L+
Sbjct: 214 CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIR 273
Query: 239 RIFVANSEKRITIPEIKNHPWFLRNLPIELT 269
+ +R+TI E NHPW +++ + T
Sbjct: 274 NLLKTEPTQRMTITEFMNHPWIMQSTKVPQT 304
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 140/271 (51%), Gaps = 17/271 (6%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNH-RSLKHPNIVR----FK 64
+G G G + +K T+E A+K ++ K +RE+ H R+ + P+IVR ++
Sbjct: 32 LGLGINGKVLQIFNKRTQEKFALKMLQDCPK----ARREVELHWRASQCPHIVRIVDVYE 87
Query: 65 EVLLTPTHLAIVMEYAAGGELFERICNAG--RFSEDEARFFFQQLISGVSYCHSMQICHR 122
+ L IVME GGELF RI + G F+E EA + + + Y HS+ I HR
Sbjct: 88 NLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHR 147
Query: 123 DLKLENTLLDGSTAPR--VKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKI 180
D+K EN LL S P +K+ DFG++K + H+ + TP Y+APEVL ++YD K
Sbjct: 148 DVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD-KS 205
Query: 181 ADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPD--YVRVSLECKHLLS 238
D+WS GV +Y++L G PF RI Y FP+ + VS E K L+
Sbjct: 206 CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIR 265
Query: 239 RIFVANSEKRITIPEIKNHPWFLRNLPIELT 269
+ +R+TI E NHPW +++ + T
Sbjct: 266 NLLKTEPTQRMTITEFMNHPWIMQSTKVPQT 296
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/268 (33%), Positives = 141/268 (52%), Gaps = 18/268 (6%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKI-DEHVQREIMNHRSL---- 55
+E + + K +G G+FG L K T + A+K +++ + D+ V+ ++ R L
Sbjct: 16 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW 75
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCH 115
+HP + T +L VMEY GG+L I + +F A F+ ++I G+ + H
Sbjct: 76 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLH 135
Query: 116 SMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVL-HSQPKSTVGTPAYIAPEVLTKK 174
S I +RDLKL+N LLD +KI DFG K ++L ++ GTP YIAPE+L +
Sbjct: 136 SKGIVYRDLKLDNILLDKDG--HIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQ 193
Query: 175 EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVR-VSLEC 233
+Y+ + D WS GV LY ML+G PF ++ + F S+ P Y R + E
Sbjct: 194 KYNHSV-DWWSFGVLLYEMLIGQSPFHGQDEEELFH-------SIRMDNPFYPRWLEKEA 245
Query: 234 KHLLSRIFVANSEKRITI-PEIKNHPWF 260
K LL ++FV EKR+ + +I+ HP F
Sbjct: 246 KDLLVKLFVREPEKRLGVRGDIRQHPLF 273
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 140/271 (51%), Gaps = 17/271 (6%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNH-RSLKHPNIVR----FK 64
+G G G + +K T+E A+K ++ K +RE+ H R+ + P+IVR ++
Sbjct: 76 LGLGINGKVLQIFNKRTQEKFALKMLQDCPK----ARREVELHWRASQCPHIVRIVDVYE 131
Query: 65 EVLLTPTHLAIVMEYAAGGELFERICNAG--RFSEDEARFFFQQLISGVSYCHSMQICHR 122
+ L IVME GGELF RI + G F+E EA + + + Y HS+ I HR
Sbjct: 132 NLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHR 191
Query: 123 DLKLENTLLDGSTAPR--VKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKI 180
D+K EN LL S P +K+ DFG++K + H+ + TP Y+APEVL ++YD K
Sbjct: 192 DVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD-KS 249
Query: 181 ADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPD--YVRVSLECKHLLS 238
D+WS GV +Y++L G PF RI Y FP+ + VS E K L+
Sbjct: 250 CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIR 309
Query: 239 RIFVANSEKRITIPEIKNHPWFLRNLPIELT 269
+ +R+TI E NHPW +++ + T
Sbjct: 310 NLLKTEPTQRMTITEFMNHPWIMQSTKVPQT 340
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 140/271 (51%), Gaps = 17/271 (6%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNH-RSLKHPNIVR----FK 64
+G G G + +K T+E A+K ++ K +RE+ H R+ + P+IVR ++
Sbjct: 70 LGLGINGKVLQIFNKRTQEKFALKMLQDCPK----ARREVELHWRASQCPHIVRIVDVYE 125
Query: 65 EVLLTPTHLAIVMEYAAGGELFERICNAG--RFSEDEARFFFQQLISGVSYCHSMQICHR 122
+ L IVME GGELF RI + G F+E EA + + + Y HS+ I HR
Sbjct: 126 NLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHR 185
Query: 123 DLKLENTLLDGSTAPR--VKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKI 180
D+K EN LL S P +K+ DFG++K + H+ + TP Y+APEVL ++YD K
Sbjct: 186 DVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD-KS 243
Query: 181 ADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPD--YVRVSLECKHLLS 238
D+WS GV +Y++L G PF RI Y FP+ + VS E K L+
Sbjct: 244 CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIR 303
Query: 239 RIFVANSEKRITIPEIKNHPWFLRNLPIELT 269
+ +R+TI E NHPW +++ + T
Sbjct: 304 NLLKTEPTQRMTITEFMNHPWIMQSTKVPQT 334
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 140/271 (51%), Gaps = 17/271 (6%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNH-RSLKHPNIVR----FK 64
+G G G + +K T+E A+K ++ K +RE+ H R+ + P+IVR ++
Sbjct: 25 LGLGINGKVLQIFNKRTQEKFALKMLQDCPK----ARREVELHWRASQCPHIVRIVDVYE 80
Query: 65 EVLLTPTHLAIVMEYAAGGELFERICNAG--RFSEDEARFFFQQLISGVSYCHSMQICHR 122
+ L IVME GGELF RI + G F+E EA + + + Y HS+ I HR
Sbjct: 81 NLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHR 140
Query: 123 DLKLENTLLDGSTAPR--VKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKI 180
D+K EN LL S P +K+ DFG++K + H+ + TP Y+APEVL ++YD K
Sbjct: 141 DVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD-KS 198
Query: 181 ADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPD--YVRVSLECKHLLS 238
D+WS GV +Y++L G PF RI Y FP+ + VS E K L+
Sbjct: 199 CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIR 258
Query: 239 RIFVANSEKRITIPEIKNHPWFLRNLPIELT 269
+ +R+TI E NHPW +++ + T
Sbjct: 259 NLLKTEPTQRMTITEFMNHPWIMQSTKVPQT 289
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 140/271 (51%), Gaps = 17/271 (6%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNH-RSLKHPNIVR----FK 64
+G G G + +K T+E A+K ++ K +RE+ H R+ + P+IVR ++
Sbjct: 24 LGLGINGKVLQIFNKRTQEKFALKMLQDCPK----ARREVELHWRASQCPHIVRIVDVYE 79
Query: 65 EVLLTPTHLAIVMEYAAGGELFERICNAG--RFSEDEARFFFQQLISGVSYCHSMQICHR 122
+ L IVME GGELF RI + G F+E EA + + + Y HS+ I HR
Sbjct: 80 NLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHR 139
Query: 123 DLKLENTLLDGSTAPR--VKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKI 180
D+K EN LL S P +K+ DFG++K + H+ + TP Y+APEVL ++YD K
Sbjct: 140 DVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD-KS 197
Query: 181 ADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPD--YVRVSLECKHLLS 238
D+WS GV +Y++L G PF RI Y FP+ + VS E K L+
Sbjct: 198 CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIR 257
Query: 239 RIFVANSEKRITIPEIKNHPWFLRNLPIELT 269
+ +R+TI E NHPW +++ + T
Sbjct: 258 NLLKTEPTQRMTITEFMNHPWIMQSTKVPQT 288
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 140/271 (51%), Gaps = 17/271 (6%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNH-RSLKHPNIVR----FK 64
+G G G + +K T+E A+K ++ K +RE+ H R+ + P+IVR ++
Sbjct: 26 LGLGINGKVLQIFNKRTQEKFALKMLQDCPK----ARREVELHWRASQCPHIVRIVDVYE 81
Query: 65 EVLLTPTHLAIVMEYAAGGELFERICNAG--RFSEDEARFFFQQLISGVSYCHSMQICHR 122
+ L IVME GGELF RI + G F+E EA + + + Y HS+ I HR
Sbjct: 82 NLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHR 141
Query: 123 DLKLENTLLDGSTAPR--VKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKI 180
D+K EN LL S P +K+ DFG++K + H+ + TP Y+APEVL ++YD K
Sbjct: 142 DVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD-KS 199
Query: 181 ADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPD--YVRVSLECKHLLS 238
D+WS GV +Y++L G PF RI Y FP+ + VS E K L+
Sbjct: 200 CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIR 259
Query: 239 RIFVANSEKRITIPEIKNHPWFLRNLPIELT 269
+ +R+TI E NHPW +++ + T
Sbjct: 260 NLLKTEPTQRMTITEFMNHPWIMQSTKVPQT 290
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 140/271 (51%), Gaps = 17/271 (6%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNH-RSLKHPNIVR----FK 64
+G G G + +K T+E A+K ++ K +RE+ H R+ + P+IVR ++
Sbjct: 31 LGLGINGKVLQIFNKRTQEKFALKMLQDCPK----ARREVELHWRASQCPHIVRIVDVYE 86
Query: 65 EVLLTPTHLAIVMEYAAGGELFERICNAG--RFSEDEARFFFQQLISGVSYCHSMQICHR 122
+ L IVME GGELF RI + G F+E EA + + + Y HS+ I HR
Sbjct: 87 NLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHR 146
Query: 123 DLKLENTLLDGSTAPR--VKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKI 180
D+K EN LL S P +K+ DFG++K + H+ + TP Y+APEVL ++YD K
Sbjct: 147 DVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD-KS 204
Query: 181 ADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPD--YVRVSLECKHLLS 238
D+WS GV +Y++L G PF RI Y FP+ + VS E K L+
Sbjct: 205 CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIR 264
Query: 239 RIFVANSEKRITIPEIKNHPWFLRNLPIELT 269
+ +R+TI E NHPW +++ + T
Sbjct: 265 NLLKTEPTQRMTITEFMNHPWIMQSTKVPQT 295
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 143/269 (53%), Gaps = 20/269 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID----EHVQREIMNHRSLK 56
+++++ +K +G+G+FG LV+ K + A+K +++ + + EH E +++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
P +V+ + ++L +VMEY AGGE+F + GRFSE ARF+ Q++ Y HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
+ + +RDLK EN L+D +++ DFG++K + + GTP Y+APE++ K Y
Sbjct: 160 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
+ K D W+ GV +Y M G PF + + + K I+S FP + S + K L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK----IVSGKVRFPSH--FSSDLKDL 268
Query: 237 LSRIFVANSEK-----RITIPEIKNHPWF 260
L + + K + + +IKNH WF
Sbjct: 269 LRNLLQVDLTKAFGNLKNGVNDIKNHKWF 297
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 140/271 (51%), Gaps = 17/271 (6%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNH-RSLKHPNIVR----FK 64
+G G G + +K T+E A+K ++ K +RE+ H R+ + P+IVR ++
Sbjct: 26 LGLGINGKVLQIFNKRTQEKFALKMLQDCPK----ARREVELHWRASQCPHIVRIVDVYE 81
Query: 65 EVLLTPTHLAIVMEYAAGGELFERICNAG--RFSEDEARFFFQQLISGVSYCHSMQICHR 122
+ L IVME GGELF RI + G F+E EA + + + Y HS+ I HR
Sbjct: 82 NLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHR 141
Query: 123 DLKLENTLLDGSTAPR--VKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKI 180
D+K EN LL S P +K+ DFG++K + H+ + TP Y+APEVL ++YD K
Sbjct: 142 DVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD-KS 199
Query: 181 ADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPD--YVRVSLECKHLLS 238
D+WS GV +Y++L G PF RI Y FP+ + VS E K L+
Sbjct: 200 CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIR 259
Query: 239 RIFVANSEKRITIPEIKNHPWFLRNLPIELT 269
+ +R+TI E NHPW +++ + T
Sbjct: 260 NLLKTEPTQRMTITEFMNHPWIMQSTKVPQT 290
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 140/271 (51%), Gaps = 17/271 (6%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNH-RSLKHPNIVR----FK 64
+G G G + +K T+E A+K ++ K +RE+ H R+ + P+IVR ++
Sbjct: 30 LGLGINGKVLQIFNKRTQEKFALKMLQDCPK----ARREVELHWRASQCPHIVRIVDVYE 85
Query: 65 EVLLTPTHLAIVMEYAAGGELFERICNAG--RFSEDEARFFFQQLISGVSYCHSMQICHR 122
+ L IVME GGELF RI + G F+E EA + + + Y HS+ I HR
Sbjct: 86 NLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHR 145
Query: 123 DLKLENTLLDGSTAPR--VKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKI 180
D+K EN LL S P +K+ DFG++K + H+ + TP Y+APEVL ++YD K
Sbjct: 146 DVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD-KS 203
Query: 181 ADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPD--YVRVSLECKHLLS 238
D+WS GV +Y++L G PF RI Y FP+ + VS E K L+
Sbjct: 204 CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIR 263
Query: 239 RIFVANSEKRITIPEIKNHPWFLRNLPIELT 269
+ +R+TI E NHPW +++ + T
Sbjct: 264 NLLKTEPTQRMTITEFMNHPWIMQSTKVPQT 294
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 141/269 (52%), Gaps = 20/269 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID----EHVQREIMNHRSLK 56
++++E +K +G+G+FG LV+ T A+K +++ + + EH E +++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
P +V+ + ++L +VMEYA GGE+F + GRFSE ARF+ Q++ Y HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
+ + +RDLK EN ++D +++ DFG +K + + GTP Y+APE++ K Y
Sbjct: 160 LDLIYRDLKPENLMIDQQGY--IQVTDFGLAKR--VKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
+ K D W+ GV +Y M G PF + + + K I+S FP + S + K L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK----IVSGKVRFPSH--FSSDLKDL 268
Query: 237 LSRIFVANSEKRI-----TIPEIKNHPWF 260
L + + KR + +IKNH WF
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 132 bits (331), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 146/272 (53%), Gaps = 25/272 (9%)
Query: 3 RYEIVKDIGSGNFGVAKLVRD---KWTRELLAVKFIERG-----QKIDEHVQREIMNHRS 54
++E++K +G G+FG LV+ R+L A+K +++ ++ ++R+I+
Sbjct: 26 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILV--E 83
Query: 55 LKHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYC 114
+ HP IV+ T L +++++ GG+LF R+ F+E++ +F+ +L + +
Sbjct: 84 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHL 143
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPK-STVGTPAYIAPEVLTK 173
HS+ I +RDLK EN LLD +K+ DFG SK S+ H + S GT Y+APEV+ +
Sbjct: 144 HSLGIIYRDLKPENILLD--EEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNR 201
Query: 174 KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLEC 233
+ + + AD WS GV ++ ML G PF+ K+ ++T+ IL P + +S E
Sbjct: 202 RGHT-QSADWWSFGVLMFEMLTGTLPFQG----KDRKETMTMILKAKLGMPQF--LSPEA 254
Query: 234 KHLLSRIFVANSEKRI-----TIPEIKNHPWF 260
+ LL +F N R+ + EIK H +F
Sbjct: 255 QSLLRMLFKRNPANRLGAGPDGVEEIKRHSFF 286
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 132 bits (331), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 140/269 (52%), Gaps = 20/269 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID----EHVQREIMNHRSLK 56
++++E +K +G+G+FG LV+ T A+K +++ + + EH E +++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
P + + + ++L +VMEYA GGE+F + GRF E ARF+ Q++ Y HS
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 160
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
+ + +RDLK EN ++D +K+ DFG++K + + GTP Y+APE++ K Y
Sbjct: 161 LDLIYRDLKPENLMIDQQGY--IKVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
+ K D W+ GV +Y M G PF + + + K I+S FP + S + K L
Sbjct: 217 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK----IVSGKVRFPSH--FSSDLKDL 269
Query: 237 LSRIFVANSEKRI-----TIPEIKNHPWF 260
L + + KR + +IKNH WF
Sbjct: 270 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 132 bits (331), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 146/272 (53%), Gaps = 25/272 (9%)
Query: 3 RYEIVKDIGSGNFGVAKLVRD---KWTRELLAVKFIERG-----QKIDEHVQREIMNHRS 54
++E++K +G G+FG LV+ R+L A+K +++ ++ ++R+I+
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILV--E 82
Query: 55 LKHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYC 114
+ HP IV+ T L +++++ GG+LF R+ F+E++ +F+ +L + +
Sbjct: 83 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHL 142
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPK-STVGTPAYIAPEVLTK 173
HS+ I +RDLK EN LLD +K+ DFG SK S+ H + S GT Y+APEV+ +
Sbjct: 143 HSLGIIYRDLKPENILLD--EEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNR 200
Query: 174 KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLEC 233
+ + + AD WS GV ++ ML G PF+ K+ ++T+ IL P + +S E
Sbjct: 201 RGHT-QSADWWSFGVLMFEMLTGTLPFQG----KDRKETMTMILKAKLGMPQF--LSPEA 253
Query: 234 KHLLSRIFVANSEKRI-----TIPEIKNHPWF 260
+ LL +F N R+ + EIK H +F
Sbjct: 254 QSLLRMLFKRNPANRLGAGPDGVEEIKRHSFF 285
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 132 bits (331), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 139/271 (51%), Gaps = 17/271 (6%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNH-RSLKHPNIVR----FK 64
+G G G + +K T+E A+K ++ K +RE+ H R+ + P+IVR ++
Sbjct: 24 LGLGINGKVLQIFNKRTQEKFALKMLQDCPK----ARREVELHWRASQCPHIVRIVDVYE 79
Query: 65 EVLLTPTHLAIVMEYAAGGELFERICNAG--RFSEDEARFFFQQLISGVSYCHSMQICHR 122
+ L IVME GGELF RI + G F+E EA + + + Y HS+ I HR
Sbjct: 80 NLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHR 139
Query: 123 DLKLENTLLDGSTAPR--VKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKI 180
D+K EN LL S P +K+ DFG++K + H+ TP Y+APEVL ++YD K
Sbjct: 140 DVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPEVLGPEKYD-KS 197
Query: 181 ADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPD--YVRVSLECKHLLS 238
D+WS GV +Y++L G PF RI Y FP+ + VS E K L+
Sbjct: 198 CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIR 257
Query: 239 RIFVANSEKRITIPEIKNHPWFLRNLPIELT 269
+ +R+TI E NHPW +++ + T
Sbjct: 258 NLLKTEPTQRMTITEFMNHPWIMQSTKVPQT 288
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 132 bits (331), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/267 (34%), Positives = 139/267 (52%), Gaps = 17/267 (6%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRF 63
YE+ +DIG G++ V K K T AVK I++ ++ D + EI+ R +HPNI+
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKR-DPTEEIEIL-LRYGQHPNIITL 81
Query: 64 KEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICHRD 123
K+V ++ +V E GGEL ++I FSE EA + V Y H+ + HRD
Sbjct: 82 KDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRD 141
Query: 124 LKLENTL-LDGSTAPR-VKICDFGYSKSSVLHSQPKSTVGTPAY----IAPEVLTKKEYD 177
LK N L +D S P ++ICDFG++K L ++ + TP Y +APEVL ++ YD
Sbjct: 142 LKPSNILYVDESGNPESIRICDFGFAKQ--LRAE-NGLLXTPCYTANFVAPEVLERQGYD 198
Query: 178 GKIADVWSCGVTLYVMLVGAYPFED-PEDPKNFRKTIGRILSVHYSFPD--YVRVSLECK 234
D+WS GV LY L G PF + P+D + + RI S +S + VS K
Sbjct: 199 AA-CDIWSLGVLLYTXLTGYTPFANGPDDTP--EEILARIGSGKFSLSGGYWNSVSDTAK 255
Query: 235 HLLSRIFVANSEKRITIPEIKNHPWFL 261
L+S+ + +R+T + HPW +
Sbjct: 256 DLVSKXLHVDPHQRLTAALVLRHPWIV 282
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 132 bits (331), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 131/267 (49%), Gaps = 19/267 (7%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSL-----KHP 58
+ +K IG G+FG L R K AVK +++ + + ++ IM+ R++ KHP
Sbjct: 40 FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHP 99
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQ 118
+V T L V++Y GGELF + F E ARF+ ++ S + Y HS+
Sbjct: 100 FLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLN 159
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLTKKEYD 177
I +RDLK EN LLD + + DFG K ++ H+ ST GTP Y+APEVL K+ YD
Sbjct: 160 IVYRDLKPENILLDSQG--HIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYD 217
Query: 178 GKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHLL 237
+ D W G LY ML G PF + + + + L + ++ +HLL
Sbjct: 218 -RTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK------PNITNSARHLL 270
Query: 238 SRIFVANSEKRI----TIPEIKNHPWF 260
+ + KR+ EIK+H +F
Sbjct: 271 EGLLQKDRTKRLGAKDDFMEIKSHVFF 297
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 131 bits (330), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 146/272 (53%), Gaps = 25/272 (9%)
Query: 3 RYEIVKDIGSGNFGVAKLVRD---KWTRELLAVKFIERG-----QKIDEHVQREIMNHRS 54
++E++K +G G+FG LV+ R+L A+K +++ ++ ++R+I+
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILV--E 82
Query: 55 LKHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYC 114
+ HP IV+ T L +++++ GG+LF R+ F+E++ +F+ +L + +
Sbjct: 83 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHL 142
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPK-STVGTPAYIAPEVLTK 173
HS+ I +RDLK EN LLD +K+ DFG SK S+ H + S GT Y+APEV+ +
Sbjct: 143 HSLGIIYRDLKPENILLDEEG--HIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNR 200
Query: 174 KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLEC 233
+ + + AD WS GV ++ ML G PF+ K+ ++T+ IL P + +S E
Sbjct: 201 RGHT-QSADWWSFGVLMFEMLTGTLPFQG----KDRKETMTMILKAKLGMPQF--LSPEA 253
Query: 234 KHLLSRIFVANSEKRI-----TIPEIKNHPWF 260
+ LL +F N R+ + EIK H +F
Sbjct: 254 QSLLRMLFKRNPANRLGAGPDGVEEIKRHSFF 285
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 131 bits (330), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 142/269 (52%), Gaps = 20/269 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID----EHVQREIMNHRSLK 56
+++++ +K +G+G+FG LV+ K + A+K +++ + + EH E +++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
P +V+ + ++L +VMEY AGGE+F + GRFSE ARF+ Q++ Y HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
+ + +RDLK EN L+D +++ DFG++K + + GTP +APE++ K Y
Sbjct: 160 LDLIYRDLKPENLLIDQQGY--IQVTDFGFAKR--VKGRTWXLCGTPEALAPEIILSKGY 215
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
+ K D W+ GV +Y M G PF + + + K I+S FP + S + K L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK----IVSGKVRFPSH--FSSDLKDL 268
Query: 237 LSRIFVANSEKRI-----TIPEIKNHPWF 260
L + + KR + +IKNH WF
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 131 bits (329), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 140/269 (52%), Gaps = 20/269 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID----EHVQREIMNHRSLK 56
++++E +K +G+G+FG LV+ T A+K +++ + + EH E +++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
P +V+ + ++L +VMEY GGE+F + GRF E ARF+ Q++ Y HS
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 160
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
+ + +RDLK EN L+D +++ DFG++K + + GTP Y+APE++ K Y
Sbjct: 161 LDLIYRDLKPENLLIDQQGY--IQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
+ K D W+ GV +Y M G PF + + + K I+S FP + S + K L
Sbjct: 217 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK----IVSGKVRFPSH--FSSDLKDL 269
Query: 237 LSRIFVANSEKRI-----TIPEIKNHPWF 260
L + + KR + +IKNH WF
Sbjct: 270 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 131 bits (329), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 140/269 (52%), Gaps = 20/269 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID----EHVQREIMNHRSLK 56
++++E +K +G+G+FG LV+ T A+K +++ + + EH E +++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
P +V+ + ++L +VMEY GGE+F + GRF E ARF+ Q++ Y HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
+ + +RDLK EN L+D +++ DFG++K + + GTP Y+APE++ K Y
Sbjct: 160 LDLIYRDLKPENLLIDQQGY--IQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
+ K D W+ GV +Y M G PF + + + K I+S FP + S + K L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK----IVSGKVRFPSH--FSSDLKDL 268
Query: 237 LSRIFVANSEKRI-----TIPEIKNHPWF 260
L + + KR + +IKNH WF
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 131 bits (329), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 140/269 (52%), Gaps = 20/269 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID----EHVQREIMNHRSLK 56
++++E +K +G+G+FG LV+ T A+K +++ + + EH E +++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
P +V+ + ++L +VMEY GGE+F + GRF E ARF+ Q++ Y HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
+ + +RDLK EN L+D +++ DFG++K + + GTP Y+APE++ K Y
Sbjct: 160 LDLIYRDLKPENLLIDQQGY--IQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
+ K D W+ GV +Y M G PF + + + K I+S FP + S + K L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK----IVSGKVRFPSH--FSSDLKDL 268
Query: 237 LSRIFVANSEKRI-----TIPEIKNHPWF 260
L + + KR + +IKNH WF
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 130 bits (328), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 92/265 (34%), Positives = 140/265 (52%), Gaps = 17/265 (6%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRF 63
Y + + IG G++ K K T AVK I++ ++ D + EI+ R +HPNI+
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKR-DPSEEIEIL-LRYGQHPNIITL 86
Query: 64 KEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICHRD 123
K+V H+ +V E GGEL ++I FSE EA F + V Y HS + HRD
Sbjct: 87 KDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRD 146
Query: 124 LKLENTL-LDGSTAPR-VKICDFGYSKSSVLHSQPKSTVGTPAY----IAPEVLTKKEYD 177
LK N L +D S P ++ICDFG++K L ++ + TP Y +APEVL ++ YD
Sbjct: 147 LKPSNILYVDESGNPECLRICDFGFAKQ--LRAE-NGLLMTPCYTANFVAPEVLKRQGYD 203
Query: 178 GKIADVWSCGVTLYVMLVGAYPFED-PEDPKNFRKTIGRILSVHYSFP--DYVRVSLECK 234
+ D+WS G+ LY ML G PF + P D + + RI S ++ ++ VS K
Sbjct: 204 -EGCDIWSLGILLYTMLAGYTPFANGPSDTP--EEILTRIGSGKFTLSGGNWNTVSETAK 260
Query: 235 HLLSRIFVANSEKRITIPEIKNHPW 259
L+S++ + +R+T ++ HPW
Sbjct: 261 DLVSKMLHVDPHQRLTAKQVLQHPW 285
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/265 (34%), Positives = 140/265 (52%), Gaps = 17/265 (6%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRF 63
Y + + IG G++ K K T AVK I++ ++ D + EI+ R +HPNI+
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKR-DPSEEIEIL-LRYGQHPNIITL 86
Query: 64 KEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICHRD 123
K+V H+ +V E GGEL ++I FSE EA F + V Y HS + HRD
Sbjct: 87 KDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRD 146
Query: 124 LKLENTL-LDGSTAPR-VKICDFGYSKSSVLHSQPKSTVGTPAY----IAPEVLTKKEYD 177
LK N L +D S P ++ICDFG++K L ++ + TP Y +APEVL ++ YD
Sbjct: 147 LKPSNILYVDESGNPECLRICDFGFAKQ--LRAE-NGLLMTPCYTANFVAPEVLKRQGYD 203
Query: 178 GKIADVWSCGVTLYVMLVGAYPFED-PEDPKNFRKTIGRILSVHYSFP--DYVRVSLECK 234
+ D+WS G+ LY ML G PF + P D + + RI S ++ ++ VS K
Sbjct: 204 -EGCDIWSLGILLYTMLAGYTPFANGPSDTP--EEILTRIGSGKFTLSGGNWNTVSETAK 260
Query: 235 HLLSRIFVANSEKRITIPEIKNHPW 259
L+S++ + +R+T ++ HPW
Sbjct: 261 DLVSKMLHVDPHQRLTAKQVLQHPW 285
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 146/272 (53%), Gaps = 27/272 (9%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTR----ELLAVKFIERG-----QKIDEHVQREIMNHRS 54
+E++K +G G+FG LVR K TR L A+K +++ ++ ++R+I+
Sbjct: 30 FELLKVLGQGSFGKVFLVR-KVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILA--D 86
Query: 55 LKHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYC 114
+ HP +V+ T L +++++ GG+LF R+ F+E++ +F+ +L G+ +
Sbjct: 87 VNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHL 146
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPK-STVGTPAYIAPEVLTK 173
HS+ I +RDLK EN LLD +K+ DFG SK ++ H + S GT Y+APEV+ +
Sbjct: 147 HSLGIIYRDLKPENILLD--EEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNR 204
Query: 174 KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLEC 233
+ + AD WS GV ++ ML G+ PF+ K+ ++T+ IL P + +S E
Sbjct: 205 QGHSHS-ADWWSYGVLMFEMLTGSLPFQG----KDRKETMTLILKAKLGMPQF--LSTEA 257
Query: 234 KHLLSRIFVANSEKRI-----TIPEIKNHPWF 260
+ LL +F N R+ EIK H ++
Sbjct: 258 QSLLRALFKRNPANRLGSGPDGAEEIKRHVFY 289
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 128 bits (321), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 135/273 (49%), Gaps = 18/273 (6%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIER-------GQKIDE--HVQREIMNH 52
+ Y + K +GSG G KL ++ T + +A+K I + ++ D +V+ EI
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 75
Query: 53 RSLKHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVS 112
+ L HP I++ K + IV+E GGELF+++ R E + +F Q++ V
Sbjct: 76 KKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 134
Query: 113 YCHSMQICHRDLKLENTLLDGSTAP-RVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL 171
Y H I HRDLK EN LL +KI DFG+SK S ++ GTP Y+APEVL
Sbjct: 135 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVL 194
Query: 172 TKKEYDG--KIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSF-PD-YV 227
G + D WS GV L++ L G PF + + + +I S Y+F P+ +
Sbjct: 195 VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKD---QITSGKYNFIPEVWA 251
Query: 228 RVSLECKHLLSRIFVANSEKRITIPEIKNHPWF 260
VS + L+ ++ V + + R T E HPW
Sbjct: 252 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 284
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 127 bits (320), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 135/273 (49%), Gaps = 18/273 (6%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIER-------GQKIDE--HVQREIMNH 52
+ Y + K +GSG G KL ++ T + +A+K I + ++ D +V+ EI
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 53 RSLKHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVS 112
+ L HP I++ K + IV+E GGELF+++ R E + +F Q++ V
Sbjct: 70 KKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 113 YCHSMQICHRDLKLENTLLDGSTAP-RVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL 171
Y H I HRDLK EN LL +KI DFG+SK S ++ GTP Y+APEVL
Sbjct: 129 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVL 188
Query: 172 TKKEYDG--KIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSF-PD-YV 227
G + D WS GV L++ L G PF + + + +I S Y+F P+ +
Sbjct: 189 VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK---DQITSGKYNFIPEVWA 245
Query: 228 RVSLECKHLLSRIFVANSEKRITIPEIKNHPWF 260
VS + L+ ++ V + + R T E HPW
Sbjct: 246 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 278
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 127 bits (320), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 135/273 (49%), Gaps = 18/273 (6%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIER-------GQKIDE--HVQREIMNH 52
+ Y + K +GSG G KL ++ T + +A+K I + ++ D +V+ EI
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 53 RSLKHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVS 112
+ L HP I++ K + IV+E GGELF+++ R E + +F Q++ V
Sbjct: 70 KKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 113 YCHSMQICHRDLKLENTLLDGSTAP-RVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL 171
Y H I HRDLK EN LL +KI DFG+SK S ++ GTP Y+APEVL
Sbjct: 129 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVL 188
Query: 172 TKKEYDG--KIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSF-PD-YV 227
G + D WS GV L++ L G PF + + + +I S Y+F P+ +
Sbjct: 189 VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK---DQITSGKYNFIPEVWA 245
Query: 228 RVSLECKHLLSRIFVANSEKRITIPEIKNHPWF 260
VS + L+ ++ V + + R T E HPW
Sbjct: 246 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 278
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 127 bits (320), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 135/273 (49%), Gaps = 18/273 (6%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIER-------GQKIDE--HVQREIMNH 52
+ Y + K +GSG G KL ++ T + +A+K I + ++ D +V+ EI
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 53 RSLKHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVS 112
+ L HP I++ K + IV+E GGELF+++ R E + +F Q++ V
Sbjct: 70 KKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 113 YCHSMQICHRDLKLENTLLDGSTAP-RVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL 171
Y H I HRDLK EN LL +KI DFG+SK S ++ GTP Y+APEVL
Sbjct: 129 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVL 188
Query: 172 TKKEYDG--KIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSF-PD-YV 227
G + D WS GV L++ L G PF + + + +I S Y+F P+ +
Sbjct: 189 VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK---DQITSGKYNFIPEVWA 245
Query: 228 RVSLECKHLLSRIFVANSEKRITIPEIKNHPWF 260
VS + L+ ++ V + + R T E HPW
Sbjct: 246 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 278
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 127 bits (320), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 135/273 (49%), Gaps = 18/273 (6%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIER-------GQKIDE--HVQREIMNH 52
+ Y + K +GSG G KL ++ T + +A+K I + ++ D +V+ EI
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 68
Query: 53 RSLKHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVS 112
+ L HP I++ K + IV+E GGELF+++ R E + +F Q++ V
Sbjct: 69 KKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 127
Query: 113 YCHSMQICHRDLKLENTLLDGSTAP-RVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL 171
Y H I HRDLK EN LL +KI DFG+SK S ++ GTP Y+APEVL
Sbjct: 128 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVL 187
Query: 172 TKKEYDG--KIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSF-PD-YV 227
G + D WS GV L++ L G PF + + + +I S Y+F P+ +
Sbjct: 188 VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK---DQITSGKYNFIPEVWA 244
Query: 228 RVSLECKHLLSRIFVANSEKRITIPEIKNHPWF 260
VS + L+ ++ V + + R T E HPW
Sbjct: 245 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 277
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 127 bits (319), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 139/270 (51%), Gaps = 20/270 (7%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQ----KIDEHVQREIMNHRSLK 56
++ +EI + +G G FG L R+K + ++A+K + + Q ++ ++REI L
Sbjct: 22 IDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLH 81
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
HPNI+R + +++EYA GEL++ + + F E ++L + YCH
Sbjct: 82 HPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHG 141
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVLTK 173
++ HRD+K EN LL +KI DFG+S +H+ + K+ GT Y+ PE++
Sbjct: 142 KKVIHRDIKPENLLLGLKGE--LKIADFGWS----VHAPSLRRKTMCGTLDYLPPEMIEG 195
Query: 174 KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLEC 233
+ ++ K+ D+W GV Y +LVG PFE + +R RI+ V FP V
Sbjct: 196 RMHNEKV-DLWCIGVLCYELLVGNPPFESASHNETYR----RIVKVDLKFP--ASVPTGA 248
Query: 234 KHLLSRIFVANSEKRITIPEIKNHPWFLRN 263
+ L+S++ N +R+ + ++ HPW N
Sbjct: 249 QDLISKLLRHNPSERLPLAQVSAHPWVRAN 278
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 111/207 (53%), Gaps = 9/207 (4%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKI-DEHVQREIMNHRSL---- 55
++ +E ++ +G G+FG L R K T +L AVK +++ + D+ V+ + R L
Sbjct: 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLAR 81
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCH 115
HP + + TP L VME+ GG+L I + RF E ARF+ ++IS + + H
Sbjct: 82 NHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLH 141
Query: 116 SMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLTKK 174
I +RDLKL+N LLD K+ DFG K + + +T GTP YIAPE+L +
Sbjct: 142 DKGIIYRDLKLDNVLLDHEG--HCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEM 199
Query: 175 EYDGKIADVWSCGVTLYVMLVGAYPFE 201
Y G D W+ GV LY ML G PFE
Sbjct: 200 LY-GPAVDWWAMGVLLYEMLCGHAPFE 225
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 135/273 (49%), Gaps = 18/273 (6%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIER-------GQKIDE--HVQREIMNH 52
+ Y + K +GSG G KL ++ T + +A++ I + ++ D +V+ EI
Sbjct: 149 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 208
Query: 53 RSLKHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVS 112
+ L HP I++ K + IV+E GGELF+++ R E + +F Q++ V
Sbjct: 209 KKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 267
Query: 113 YCHSMQICHRDLKLENTLLDGSTAP-RVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL 171
Y H I HRDLK EN LL +KI DFG+SK S ++ GTP Y+APEVL
Sbjct: 268 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVL 327
Query: 172 TKKEYDG--KIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSF-PD-YV 227
G + D WS GV L++ L G PF + + + +I S Y+F P+ +
Sbjct: 328 VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK---DQITSGKYNFIPEVWA 384
Query: 228 RVSLECKHLLSRIFVANSEKRITIPEIKNHPWF 260
VS + L+ ++ V + + R T E HPW
Sbjct: 385 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 417
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 135/273 (49%), Gaps = 18/273 (6%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIER-------GQKIDE--HVQREIMNH 52
+ Y + K +GSG G KL ++ T + +A++ I + ++ D +V+ EI
Sbjct: 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 194
Query: 53 RSLKHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVS 112
+ L HP I++ K + IV+E GGELF+++ R E + +F Q++ V
Sbjct: 195 KKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 253
Query: 113 YCHSMQICHRDLKLENTLLDGSTAP-RVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL 171
Y H I HRDLK EN LL +KI DFG+SK S ++ GTP Y+APEVL
Sbjct: 254 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVL 313
Query: 172 TKKEYDG--KIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSF-PD-YV 227
G + D WS GV L++ L G PF + + + +I S Y+F P+ +
Sbjct: 314 VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK---DQITSGKYNFIPEVWA 370
Query: 228 RVSLECKHLLSRIFVANSEKRITIPEIKNHPWF 260
VS + L+ ++ V + + R T E HPW
Sbjct: 371 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 403
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 127/261 (48%), Gaps = 9/261 (3%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEH-VQREIMNHRSLKHPNIVR 62
Y+I++++GSG FGV +K T + KFI +D++ V+ EI L HP ++
Sbjct: 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLIN 112
Query: 63 FKEVLLTPTHLAIVMEYAAGGELFERICNAG-RFSEDEARFFFQQLISGVSYCHSMQICH 121
+ + +++E+ +GGELF+RI + SE E + +Q G+ + H I H
Sbjct: 113 LHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVH 172
Query: 122 RDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKIA 181
D+K EN + + A VKI DFG + K T T + APE++ +E G
Sbjct: 173 LDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVD-REPVGFYT 231
Query: 182 DVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPD--YVRVSLECKHLLSR 239
D+W+ GV YV+L G PF +D +T+ + + F + + VS E K +
Sbjct: 232 DMWAIGVLGYVLLSGLSPFAGEDD----LETLQNVKRCDWEFDEDAFSSVSPEAKDFIKN 287
Query: 240 IFVANSEKRITIPEIKNHPWF 260
+ KR+T+ + HPW
Sbjct: 288 LLQKEPRKRLTVHDALEHPWL 308
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/274 (33%), Positives = 141/274 (51%), Gaps = 26/274 (9%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID------EHVQREIMNHRSLKH 57
YE+ + IG G F V + ++ T + AVK ++ + E ++RE LKH
Sbjct: 26 YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGEL-FERICNAGR---FSEDEARFFFQQLISGVSY 113
P+IV E + L +V E+ G +L FE + A +SE A + +Q++ + Y
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 114 CHSMQICHRDLKLENTLLDG--STAPRVKICDFGYS----KSSVLHSQPKSTVGTPAYIA 167
CH I HRD+K EN LL ++AP VK+ DFG + +S ++ VGTP ++A
Sbjct: 146 CHDNNIIHRDVKPENVLLASKENSAP-VKLGDFGVAIQLGESGLVAG---GRVGTPHFMA 201
Query: 168 PEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFP-DY 226
PEV+ ++ Y GK DVW CGV L+++L G PF ++ R G I + P +
Sbjct: 202 PEVVKREPY-GKPVDVWGCGVILFILLSGCLPFYGTKE----RLFEGIIKGKYKMNPRQW 256
Query: 227 VRVSLECKHLLSRIFVANSEKRITIPEIKNHPWF 260
+S K L+ R+ + + +RIT+ E NHPW
Sbjct: 257 SHISESAKDLVRRMLMLDPAERITVYEALNHPWL 290
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 96/275 (34%), Positives = 141/275 (51%), Gaps = 26/275 (9%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEH------VQREIMNHRSL 55
E YE+VK IG G FG +LVR K TR++ A+K + + + I +R+IM +
Sbjct: 74 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN- 132
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCH 115
P +V+ +L +VMEY GG+L + N E ARF+ +++ + H
Sbjct: 133 -SPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD-VPEKWARFYTAEVVLALDAIH 190
Query: 116 SMQICHRDLKLENTLLDGSTAPRVKICDFG----YSKSSVLHSQPKSTVGTPAYIAPEVL 171
SM HRD+K +N LLD S +K+ DFG +K ++ + VGTP YI+PEVL
Sbjct: 191 SMGFIHRDVKPDNMLLDKSG--HLKLADFGTCMKMNKEGMVRCD--TAVGTPDYISPEVL 246
Query: 172 TKK---EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVR 228
+ Y G+ D WS GV LY MLVG PF + K + S+ +FPD
Sbjct: 247 KSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSL--TFPDDND 304
Query: 229 VSLECKHLLSRIFVANSEKRI---TIPEIKNHPWF 260
+S E K+L+ F+ + E R+ + EIK H +F
Sbjct: 305 ISKEAKNLIC-AFLTDREVRLGRNGVEEIKRHLFF 338
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/271 (34%), Positives = 135/271 (49%), Gaps = 17/271 (6%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNH-RSLKHPNIVR----FK 64
+G G G + +K T+E A+K ++ K +RE+ H R+ + P+IVR ++
Sbjct: 70 LGLGINGKVLQIFNKRTQEKFALKXLQDCPK----ARREVELHWRASQCPHIVRIVDVYE 125
Query: 65 EVLLTPTHLAIVMEYAAGGELFERICNAG--RFSEDEARFFFQQLISGVSYCHSMQICHR 122
+ L IV E GGELF RI + G F+E EA + + + Y HS+ I HR
Sbjct: 126 NLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAHR 185
Query: 123 DLKLENTLLDGSTAPR--VKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKI 180
D+K EN LL S P +K+ DFG++K + H+ + TP Y+APEVL ++YD K
Sbjct: 186 DVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD-KS 243
Query: 181 ADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPD--YVRVSLECKHLLS 238
D WS GV Y++L G PF RI Y FP+ + VS E K L+
Sbjct: 244 CDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPNPEWSEVSEEVKXLIR 303
Query: 239 RIFVANSEKRITIPEIKNHPWFLRNLPIELT 269
+ +R TI E NHPW ++ + T
Sbjct: 304 NLLKTEPTQRXTITEFXNHPWIXQSTKVPQT 334
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/275 (34%), Positives = 141/275 (51%), Gaps = 26/275 (9%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEH------VQREIMNHRSL 55
E YE+VK IG G FG +LVR K TR++ A+K + + + I +R+IM +
Sbjct: 74 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN- 132
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCH 115
P +V+ +L +VMEY GG+L + N E ARF+ +++ + H
Sbjct: 133 -SPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD-VPEKWARFYTAEVVLALDAIH 190
Query: 116 SMQICHRDLKLENTLLDGSTAPRVKICDFG----YSKSSVLHSQPKSTVGTPAYIAPEVL 171
SM HRD+K +N LLD S +K+ DFG +K ++ + VGTP YI+PEVL
Sbjct: 191 SMGFIHRDVKPDNMLLDKSG--HLKLADFGTCMKMNKEGMVRCD--TAVGTPDYISPEVL 246
Query: 172 TKK---EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVR 228
+ Y G+ D WS GV LY MLVG PF + K + S+ +FPD
Sbjct: 247 KSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSL--TFPDDND 304
Query: 229 VSLECKHLLSRIFVANSEKRI---TIPEIKNHPWF 260
+S E K+L+ F+ + E R+ + EIK H +F
Sbjct: 305 ISKEAKNLIC-AFLTDREVRLGRNGVEEIKRHLFF 338
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/275 (34%), Positives = 141/275 (51%), Gaps = 26/275 (9%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEH------VQREIMNHRSL 55
E YE+VK IG G FG +LVR K TR++ A+K + + + I +R+IM +
Sbjct: 69 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN- 127
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCH 115
P +V+ +L +VMEY GG+L + N E ARF+ +++ + H
Sbjct: 128 -SPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD-VPEKWARFYTAEVVLALDAIH 185
Query: 116 SMQICHRDLKLENTLLDGSTAPRVKICDFG----YSKSSVLHSQPKSTVGTPAYIAPEVL 171
SM HRD+K +N LLD S +K+ DFG +K ++ + VGTP YI+PEVL
Sbjct: 186 SMGFIHRDVKPDNMLLDKSG--HLKLADFGTCMKMNKEGMVRCD--TAVGTPDYISPEVL 241
Query: 172 TKK---EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVR 228
+ Y G+ D WS GV LY MLVG PF + K + S+ +FPD
Sbjct: 242 KSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSL--TFPDDND 299
Query: 229 VSLECKHLLSRIFVANSEKRI---TIPEIKNHPWF 260
+S E K+L+ F+ + E R+ + EIK H +F
Sbjct: 300 ISKEAKNLIC-AFLTDREVRLGRNGVEEIKRHLFF 333
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 124 bits (312), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 130/265 (49%), Gaps = 14/265 (5%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEH----VQREIMNHRSLK 56
M+RY + +G G F + D T+E+ A K + + + H + EI H+SL
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD 100
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
+P++V F + +V+E L E +E EAR+F +Q I GV Y H+
Sbjct: 101 NPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHN 160
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLTKKE 175
++ HRDLKL N L+ VKI DFG + + K T+ GTP YIAPEVL KK
Sbjct: 161 NRVIHRDLKLGNLFLNDDMD--VKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKG 218
Query: 176 YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKH 235
+ ++ D+WS G LY +LVG PFE ++T RI YS P ++
Sbjct: 219 HSFEV-DIWSLGCILYTLLVGKPPFET----SCLKETYIRIKKNEYSVPRHINPVASA-- 271
Query: 236 LLSRIFVANSEKRITIPEIKNHPWF 260
L+ R+ A+ R ++ E+ +F
Sbjct: 272 LIRRMLHADPTLRPSVAELLTDEFF 296
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 132/277 (47%), Gaps = 24/277 (8%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFI----------ERGQKIDEHVQREIMN 51
E YE + +G G V + K T + AVK I E Q++ E +E+
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 52 HRSLK-HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISG 110
R + HPNI++ K+ T T +V + GELF+ + SE E R + L+
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEV 136
Query: 111 VSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEV 170
+ H + I HRDLK EN LLD +K+ DFG+S + +S GTP+Y+APE+
Sbjct: 137 ICALHKLNIVHRDLKPENILLDDDM--NIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEI 194
Query: 171 LTKKEYD-----GKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSF-- 223
+ D GK D+WS GV +Y +L G+ PF + R I+S +Y F
Sbjct: 195 IECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLR----MIMSGNYQFGS 250
Query: 224 PDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWF 260
P++ S K L+SR V +KR T E HP+F
Sbjct: 251 PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFF 287
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 135/267 (50%), Gaps = 26/267 (9%)
Query: 8 KDIGSGNFGVAKLVRDKWTRELLAVKFI--ERGQKIDEHVQREIMNHRSLKHPNIVRFKE 65
+ +GSG FG LV ++ + +K I +R Q E ++ EI +SL HPNI++ E
Sbjct: 28 RKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFE 87
Query: 66 VLLTPTHLAIVMEYAAGGELFERICNA---GR-FSEDEARFFFQQLISGVSYCHSMQICH 121
V ++ IVME GGEL ERI +A G+ SE +Q+++ ++Y HS + H
Sbjct: 88 VFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVH 147
Query: 122 RDLKLENTLL-DGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKI 180
+DLK EN L D S +KI DFG ++ + GT Y+APEV K++ K
Sbjct: 148 KDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVF-KRDVTFK- 205
Query: 181 ADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECK------ 234
D+WS GV +Y +L G PF + +K Y P+Y ++EC+
Sbjct: 206 CDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKAT-------YKEPNY---AVECRPLTPQA 255
Query: 235 -HLLSRIFVANSEKRITIPEIKNHPWF 260
LL ++ + E+R + ++ +H WF
Sbjct: 256 VDLLKQMLTKDPERRPSAAQVLHHEWF 282
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 142/312 (45%), Gaps = 58/312 (18%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQ------KIDEHVQREIMNHRSL 55
++Y + IG G++GV ++ + TR + A+K + + + K E ++ E+ + L
Sbjct: 26 KKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKL 85
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFER--------------------ICNAGRF 95
HPNI R EV ++ +VME GG L ++ IC
Sbjct: 86 HHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPEC 145
Query: 96 SED----------EARFFFQ----------QLISGVSYCHSMQICHRDLKLENTLLDGST 135
+E+ E+ F Q Q+ S + Y H+ ICHRD+K EN L +
Sbjct: 146 NEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNK 205
Query: 136 APRVKICDFGYSK-----SSVLHSQPKSTVGTPAYIAPEVL-TKKEYDGKIADVWSCGVT 189
+ +K+ DFG SK ++ + + GTP ++APEVL T E G D WS GV
Sbjct: 206 SFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVL 265
Query: 190 LYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSF--PDYVRVSLECKHLLSRIFVANSEK 247
L+++L+GA PF D TI ++L+ F P+Y +S + LLS + N ++
Sbjct: 266 LHLLLMGAVPFPGVNDA----DTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDE 321
Query: 248 RITIPEIKNHPW 259
R HPW
Sbjct: 322 RFDAMRALQHPW 333
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 129/265 (48%), Gaps = 14/265 (5%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEH----VQREIMNHRSLK 56
M+RY + +G G F + D T+E+ A K + + + H + EI H+SL
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD 100
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
+P++V F + +V+E L E +E EAR+F +Q I GV Y H+
Sbjct: 101 NPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHN 160
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGY-SKSSVLHSQPKSTVGTPAYIAPEVLTKKE 175
++ HRDLKL N L+ VKI DFG +K + K GTP YIAPEVL KK
Sbjct: 161 NRVIHRDLKLGNLFLNDDMD--VKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKG 218
Query: 176 YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKH 235
+ ++ D+WS G LY +LVG PFE ++T RI YS P ++
Sbjct: 219 HSFEV-DIWSLGCILYTLLVGKPPFET----SCLKETYIRIKKNEYSVPRHINPVASA-- 271
Query: 236 LLSRIFVANSEKRITIPEIKNHPWF 260
L+ R+ A+ R ++ E+ +F
Sbjct: 272 LIRRMLHADPTLRPSVAELLTDEFF 296
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 129/265 (48%), Gaps = 14/265 (5%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEH----VQREIMNHRSLK 56
M+RY + +G G F + D T+E+ A K + + + H + EI H+SL
Sbjct: 25 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD 84
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
+P++V F + +V+E L E +E EAR+F +Q I GV Y H+
Sbjct: 85 NPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHN 144
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGY-SKSSVLHSQPKSTVGTPAYIAPEVLTKKE 175
++ HRDLKL N L+ VKI DFG +K + K GTP YIAPEVL KK
Sbjct: 145 NRVIHRDLKLGNLFLNDDMD--VKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKG 202
Query: 176 YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKH 235
+ ++ D+WS G LY +LVG PFE ++T RI YS P ++
Sbjct: 203 HSFEV-DIWSLGCILYTLLVGKPPFET----SCLKETYIRIKKNEYSVPRHINPVASA-- 255
Query: 236 LLSRIFVANSEKRITIPEIKNHPWF 260
L+ R+ A+ R ++ E+ +F
Sbjct: 256 LIRRMLHADPTLRPSVAELLTDEFF 280
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 135/273 (49%), Gaps = 23/273 (8%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRD---KWTRELLAVK-----FIERGQKIDEHVQREIMNHR 53
E +E+++ +G G +G VR T ++ A+K I R K H + E
Sbjct: 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILE 76
Query: 54 SLKHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
+KHP IV T L +++EY +GGELF ++ G F ED A F+ ++ + +
Sbjct: 77 EVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGH 136
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLT 172
H I +RDLK EN +L+ VK+ DFG K S+ T GT Y+APE+L
Sbjct: 137 LHQKGIIYRDLKPENIMLNHQG--HVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILM 194
Query: 173 KKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLE 232
+ ++ + D WS G +Y ML GA PF +N +KTI +IL + P Y ++ E
Sbjct: 195 RSGHN-RAVDWWSLGALMYDMLTGAPPFTG----ENRKKTIDKILKCKLNLPPY--LTQE 247
Query: 233 CKHLLSRIFVANSEKRI-----TIPEIKNHPWF 260
+ LL ++ N+ R+ E++ HP+F
Sbjct: 248 ARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFF 280
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/265 (32%), Positives = 129/265 (48%), Gaps = 14/265 (5%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEH----VQREIMNHRSLK 56
M+RY + +G G F + D T+E+ A K + + + H + EI H+SL
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD 100
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
+P++V F + +V+E L E +E EAR+F +Q I GV Y H+
Sbjct: 101 NPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHN 160
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLTKKE 175
++ HRDLKL N L+ VKI DFG + + K + GTP YIAPEVL KK
Sbjct: 161 NRVIHRDLKLGNLFLNDDMD--VKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKG 218
Query: 176 YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKH 235
+ ++ D+WS G LY +LVG PFE ++T RI YS P ++
Sbjct: 219 HSFEV-DIWSLGCILYTLLVGKPPFET----SCLKETYIRIKKNEYSVPRHINPVASA-- 271
Query: 236 LLSRIFVANSEKRITIPEIKNHPWF 260
L+ R+ A+ R ++ E+ +F
Sbjct: 272 LIRRMLHADPTLRPSVAELLTDEFF 296
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 131/277 (47%), Gaps = 24/277 (8%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFI----------ERGQKIDEHVQREIMN 51
E YE + +G G V + K T + AVK I E Q++ E +E+
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 52 HRSLK-HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISG 110
R + HPNI++ K+ T T +V + GELF+ + SE E R + L+
Sbjct: 64 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEV 123
Query: 111 VSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEV 170
+ H + I HRDLK EN LLD +K+ DFG+S + + GTP+Y+APE+
Sbjct: 124 ICALHKLNIVHRDLKPENILLDDDM--NIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEI 181
Query: 171 LTKKEYD-----GKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSF-- 223
+ D GK D+WS GV +Y +L G+ PF + R I+S +Y F
Sbjct: 182 IECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLR----MIMSGNYQFGS 237
Query: 224 PDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWF 260
P++ S K L+SR V +KR T E HP+F
Sbjct: 238 PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFF 274
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 131/277 (47%), Gaps = 24/277 (8%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFI----------ERGQKIDEHVQREIMN 51
E YE + +G G V + K T + AVK I E Q++ E +E+
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 52 HRSLK-HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISG 110
R + HPNI++ K+ T T +V + GELF+ + SE E R + L+
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEV 136
Query: 111 VSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEV 170
+ H + I HRDLK EN LLD +K+ DFG+S + + GTP+Y+APE+
Sbjct: 137 ICALHKLNIVHRDLKPENILLDDDM--NIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEI 194
Query: 171 LTKKEYD-----GKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSF-- 223
+ D GK D+WS GV +Y +L G+ PF + R I+S +Y F
Sbjct: 195 IECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLR----MIMSGNYQFGS 250
Query: 224 PDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWF 260
P++ S K L+SR V +KR T E HP+F
Sbjct: 251 PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFF 287
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 121 bits (303), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 131/262 (50%), Gaps = 20/262 (7%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIERGQKI-DEHVQREIMNHRSL----KHPNIVRFK 64
+G G+FG L K T EL AVK +++ I D+ V+ ++ R L K P + +
Sbjct: 28 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH 87
Query: 65 EVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICHRDL 124
T L VMEY GG+L I GRF E A F+ ++ G+ + S I +RDL
Sbjct: 88 SCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDL 147
Query: 125 KLENTLLDGSTAPRVKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLTKKEYDGKIADV 183
KL+N +LD + +KI DFG K ++ K GTP YIAPE++ + Y GK D
Sbjct: 148 KLDNVMLD--SEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPY-GKSVDW 204
Query: 184 WSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVA 243
W+ GV LY ML G PFE ++ + F+ I+ + ++P +S E + +
Sbjct: 205 WAFGVLLYEMLAGQAPFEGEDEDELFQS----IMEHNVAYPK--SMSKEAVAICKGLMTK 258
Query: 244 NSEKRITI-PE----IKNHPWF 260
+ KR+ PE IK H +F
Sbjct: 259 HPGKRLGCGPEGERDIKEHAFF 280
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 85/257 (33%), Positives = 126/257 (49%), Gaps = 16/257 (6%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMN-----HRSLKHPNIVRFK 64
+G G F + D T+E+ A K + + + H QRE M+ HRSL H ++V F
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPH-QREKMSMEISIHRSLAHQHVVGFH 87
Query: 65 EVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICHRDL 124
+ +V+E L E +E EAR++ +Q++ G Y H ++ HRDL
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 147
Query: 125 KLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLTKKEYDGKIADV 183
KL N L+ VKI DFG + + K T+ GTP YIAPEVL+KK + ++ DV
Sbjct: 148 KLGNLFLNEDL--EVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEV-DV 204
Query: 184 WSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVA 243
WS G +Y +LVG PFE ++T RI YS P ++ L+ ++
Sbjct: 205 WSIGCIMYTLLVGKPPFET----SCLKETYLRIKKNEYSIPKHINPV--AASLIQKMLQT 258
Query: 244 NSEKRITIPEIKNHPWF 260
+ R TI E+ N +F
Sbjct: 259 DPTARPTINELLNDEFF 275
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 131/262 (50%), Gaps = 20/262 (7%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIERGQKI-DEHVQREIMNHRSL----KHPNIVRFK 64
+G G+FG L K T EL AVK +++ I D+ V+ ++ R L K P + +
Sbjct: 349 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH 408
Query: 65 EVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICHRDL 124
T L VMEY GG+L I GRF E A F+ ++ G+ + S I +RDL
Sbjct: 409 SCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDL 468
Query: 125 KLENTLLDGSTAPRVKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLTKKEYDGKIADV 183
KL+N +LD + +KI DFG K ++ K GTP YIAPE++ + Y GK D
Sbjct: 469 KLDNVMLD--SEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPY-GKSVDW 525
Query: 184 WSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVA 243
W+ GV LY ML G PFE ++ + F+ I+ + ++P +S E + +
Sbjct: 526 WAFGVLLYEMLAGQAPFEGEDEDELFQS----IMEHNVAYPK--SMSKEAVAICKGLMTK 579
Query: 244 NSEKRITI-PE----IKNHPWF 260
+ KR+ PE IK H +F
Sbjct: 580 HPGKRLGCGPEGERDIKEHAFF 601
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 120 bits (301), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 132/264 (50%), Gaps = 20/264 (7%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIERGQKI-DEHVQREIMNHRSL----KHPNIVRFK 64
+G G+FG L K T EL A+K +++ I D+ V+ ++ R L K P + +
Sbjct: 27 LGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQLH 86
Query: 65 EVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICHRDL 124
T L VMEY GG+L I G+F E +A F+ ++ G+ + H I +RDL
Sbjct: 87 SCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDL 146
Query: 125 KLENTLLDGSTAPRVKICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLTKKEYDGKIADV 183
KL+N +LD +KI DFG K ++ + GTP YIAPE++ + Y GK D
Sbjct: 147 KLDNVMLDSEG--HIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPY-GKSVDW 203
Query: 184 WSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVA 243
W+ GV LY ML G PF+ ++ + F+ I+ + S+P +S E + +
Sbjct: 204 WAYGVLLYEMLAGQPPFDGEDEDELFQS----IMEHNVSYPK--SLSKEAVSICKGLMTK 257
Query: 244 NSEKRITI-PE----IKNHPWFLR 262
+ KR+ PE ++ H +F R
Sbjct: 258 HPAKRLGCGPEGERDVREHAFFRR 281
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/257 (33%), Positives = 126/257 (49%), Gaps = 16/257 (6%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMN-----HRSLKHPNIVRFK 64
+G G F + D T+E+ A K + + + H QRE M+ HRSL H ++V F
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPH-QREKMSMEISIHRSLAHQHVVGFH 83
Query: 65 EVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICHRDL 124
+ +V+E L E +E EAR++ +Q++ G Y H ++ HRDL
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 143
Query: 125 KLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLTKKEYDGKIADV 183
KL N L+ VKI DFG + + K T+ GTP YIAPEVL+KK + ++ DV
Sbjct: 144 KLGNLFLNEDL--EVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEV-DV 200
Query: 184 WSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVA 243
WS G +Y +LVG PFE ++T RI YS P ++ L+ ++
Sbjct: 201 WSIGCIMYTLLVGKPPFET----SCLKETYLRIKKNEYSIPKHINPV--AASLIQKMLQT 254
Query: 244 NSEKRITIPEIKNHPWF 260
+ R TI E+ N +F
Sbjct: 255 DPTARPTINELLNDEFF 271
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/257 (33%), Positives = 126/257 (49%), Gaps = 16/257 (6%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMN-----HRSLKHPNIVRFK 64
+G G F + D T+E+ A K + + + H QRE M+ HRSL H ++V F
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPH-QREKMSMEISIHRSLAHQHVVGFH 83
Query: 65 EVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICHRDL 124
+ +V+E L E +E EAR++ +Q++ G Y H ++ HRDL
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 143
Query: 125 KLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLTKKEYDGKIADV 183
KL N L+ VKI DFG + + K T+ GTP YIAPEVL+KK + ++ DV
Sbjct: 144 KLGNLFLNEDL--EVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEV-DV 200
Query: 184 WSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVA 243
WS G +Y +LVG PFE ++T RI YS P ++ L+ ++
Sbjct: 201 WSIGCIMYTLLVGKPPFET----SCLKETYLRIKKNEYSIPKHINPV--AASLIQKMLQT 254
Query: 244 NSEKRITIPEIKNHPWF 260
+ R TI E+ N +F
Sbjct: 255 DPTARPTINELLNDEFF 271
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 142/265 (53%), Gaps = 24/265 (9%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE---RGQKIDEHVQREIMNHRSLKH 57
ME+Y ++ IG G+FG A LV+ +K I K E +RE+ ++KH
Sbjct: 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKH 82
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGR---FSEDEARFFFQQLISGVSYC 114
PNIV+++E L IVM+Y GG+LF+RI NA + F ED+ +F Q+ + +
Sbjct: 83 PNIVQYRESFEENGSLYIVMDYCEGGDLFKRI-NAQKGVLFQEDQILDWFVQICLALKHV 141
Query: 115 HSMQICHRDLKLENTLL--DGSTAPRVKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPE 169
H +I HRD+K +N L DG+ V++ DFG ++ VL+S ++ +GTP Y++PE
Sbjct: 142 HDRKILHRDIKSQNIFLTKDGT----VQLGDFGIAR--VLNSTVELARACIGTPYYLSPE 195
Query: 170 VLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRV 229
+ K Y+ K +D+W+ G LY + + FE + + + +I+S + P +
Sbjct: 196 ICENKPYNNK-SDIWALGCVLYELCTLKHAFE----AGSMKNLVLKIISGSFP-PVSLHY 249
Query: 230 SLECKHLLSRIFVANSEKRITIPEI 254
S + + L+S++F N R ++ I
Sbjct: 250 SYDLRSLVSQLFKRNPRDRPSVNSI 274
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 134/273 (49%), Gaps = 23/273 (8%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRD---KWTRELLAVK-----FIERGQKIDEHVQREIMNHR 53
E +E+++ +G G +G VR T ++ A+K I R K H + E
Sbjct: 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILE 76
Query: 54 SLKHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
+KHP IV T L +++EY +GGELF ++ G F ED A F+ ++ + +
Sbjct: 77 EVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGH 136
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQ-PKSTVGTPAYIAPEVLT 172
H I +RDLK EN +L+ VK+ DFG K S+ GT Y+APE+L
Sbjct: 137 LHQKGIIYRDLKPENIMLNHQG--HVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILM 194
Query: 173 KKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLE 232
+ ++ + D WS G +Y ML GA PF +N +KTI +IL + P Y ++ E
Sbjct: 195 RSGHN-RAVDWWSLGALMYDMLTGAPPFTG----ENRKKTIDKILKCKLNLPPY--LTQE 247
Query: 233 CKHLLSRIFVANSEKRI-----TIPEIKNHPWF 260
+ LL ++ N+ R+ E++ HP+F
Sbjct: 248 ARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFF 280
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 125/257 (48%), Gaps = 16/257 (6%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMN-----HRSLKHPNIVRFK 64
+G G F + D T+E+ A K + + + H QRE M+ HRSL H ++V F
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPH-QREKMSMEISIHRSLAHQHVVGFH 107
Query: 65 EVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICHRDL 124
+ +V+E L E +E EAR++ +Q++ G Y H ++ HRDL
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 167
Query: 125 KLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLTKKEYDGKIADV 183
KL N L+ VKI DFG + + K + GTP YIAPEVL+KK + ++ DV
Sbjct: 168 KLGNLFLNEDL--EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEV-DV 224
Query: 184 WSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVA 243
WS G +Y +LVG PFE ++T RI YS P ++ L+ ++
Sbjct: 225 WSIGCIMYTLLVGKPPFET----SCLKETYLRIKKNEYSIPKHINPV--AASLIQKMLQT 278
Query: 244 NSEKRITIPEIKNHPWF 260
+ R TI E+ N +F
Sbjct: 279 DPTARPTINELLNDEFF 295
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 125/257 (48%), Gaps = 16/257 (6%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMN-----HRSLKHPNIVRFK 64
+G G F + D T+E+ A K + + + H QRE M+ HRSL H ++V F
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPH-QREKMSMEISIHRSLAHQHVVGFH 105
Query: 65 EVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICHRDL 124
+ +V+E L E +E EAR++ +Q++ G Y H ++ HRDL
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 165
Query: 125 KLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLTKKEYDGKIADV 183
KL N L+ VKI DFG + + K + GTP YIAPEVL+KK + ++ DV
Sbjct: 166 KLGNLFLNEDL--EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEV-DV 222
Query: 184 WSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVA 243
WS G +Y +LVG PFE ++T RI YS P ++ L+ ++
Sbjct: 223 WSIGCIMYTLLVGKPPFET----SCLKETYLRIKKNEYSIPKHINPV--AASLIQKMLQT 276
Query: 244 NSEKRITIPEIKNHPWF 260
+ R TI E+ N +F
Sbjct: 277 DPTARPTINELLNDEFF 293
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 141/275 (51%), Gaps = 26/275 (9%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEH------VQREIMNHRSL 55
E Y++VK IG G FG +LVR K ++++ A+K + + + I +R+IM +
Sbjct: 75 EDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN- 133
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCH 115
P +V+ +L +VMEY GG+L + N E A+F+ +++ + H
Sbjct: 134 -SPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYD-VPEKWAKFYTAEVVLALDAIH 191
Query: 116 SMQICHRDLKLENTLLDGSTAPRVKICDFG----YSKSSVLHSQPKSTVGTPAYIAPEVL 171
SM + HRD+K +N LLD +K+ DFG ++ ++H + VGTP YI+PEVL
Sbjct: 192 SMGLIHRDVKPDNMLLDKHG--HLKLADFGTCMKMDETGMVHCD--TAVGTPDYISPEVL 247
Query: 172 TKK---EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVR 228
+ Y G+ D WS GV L+ MLVG PF + K + S+ FP+
Sbjct: 248 KSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSL--CFPEDAE 305
Query: 229 VSLECKHLLSRIFVANSEKRI---TIPEIKNHPWF 260
+S K+L+ F+ + E R+ + EIK HP+F
Sbjct: 306 ISKHAKNLIC-AFLTDREVRLGRNGVEEIKQHPFF 339
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 125/257 (48%), Gaps = 16/257 (6%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMN-----HRSLKHPNIVRFK 64
+G G F + D T+E+ A K + + + H QRE M+ HRSL H ++V F
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPH-QREKMSMEISIHRSLAHQHVVGFH 81
Query: 65 EVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICHRDL 124
+ +V+E L E +E EAR++ +Q++ G Y H ++ HRDL
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 141
Query: 125 KLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLTKKEYDGKIADV 183
KL N L+ VKI DFG + + K + GTP YIAPEVL+KK + ++ DV
Sbjct: 142 KLGNLFLNEDL--EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEV-DV 198
Query: 184 WSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVA 243
WS G +Y +LVG PFE ++T RI YS P ++ L+ ++
Sbjct: 199 WSIGCIMYTLLVGKPPFET----SCLKETYLRIKKNEYSIPKHINPV--AASLIQKMLQT 252
Query: 244 NSEKRITIPEIKNHPWF 260
+ R TI E+ N +F
Sbjct: 253 DPTARPTINELLNDEFF 269
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 134/274 (48%), Gaps = 26/274 (9%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDE----HVQREIMNHRSLKH 57
E ++ K +G G+F L R+ T A+K +E+ I E +V RE L H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSM 117
P V+ L + YA GEL + I G F E RF+ +++S + Y H
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 118 QICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPK-----STVGTPAYIAPEVLT 172
I HRDLK EN LL+ ++I DFG +K VL + K S VGT Y++PE+LT
Sbjct: 153 GIIHRDLKPENILLNEDM--HIQITDFGTAK--VLSPESKQARANSFVGTAQYVSPELLT 208
Query: 173 KKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLE 232
+K K +D+W+ G +Y ++ G PF + F+K I+ + Y FP+ + +
Sbjct: 209 EKS-ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQK----IIKLEYDFPE--KFFPK 261
Query: 233 CKHLLSRIFVANSEKRITIPE------IKNHPWF 260
+ L+ ++ V ++ KR+ E +K HP+F
Sbjct: 262 ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 295
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 118 bits (295), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 134/274 (48%), Gaps = 26/274 (9%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDE----HVQREIMNHRSLKH 57
E ++ K +G G+F L R+ T A+K +E+ I E +V RE L H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSM 117
P V+ L + YA GEL + I G F E RF+ +++S + Y H
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 118 QICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPK-----STVGTPAYIAPEVLT 172
I HRDLK EN LL+ ++I DFG +K VL + K S VGT Y++PE+LT
Sbjct: 149 GIIHRDLKPENILLNEDM--HIQITDFGTAK--VLSPESKQARANSFVGTAQYVSPELLT 204
Query: 173 KKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLE 232
+K K +D+W+ G +Y ++ G PF + F+K I+ + Y FP+ + +
Sbjct: 205 EKS-ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQK----IIKLEYDFPE--KFFPK 257
Query: 233 CKHLLSRIFVANSEKRITIPE------IKNHPWF 260
+ L+ ++ V ++ KR+ E +K HP+F
Sbjct: 258 ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 291
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 117 bits (294), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 133/274 (48%), Gaps = 26/274 (9%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDE----HVQREIMNHRSLKH 57
E ++ K +G G+F L R+ T A+K +E+ I E +V RE L H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSM 117
P V+ L + YA GEL + I G F E RF+ +++S + Y H
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 118 QICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST-----VGTPAYIAPEVLT 172
I HRDLK EN LL+ ++I DFG +K VL + K VGT Y++PE+LT
Sbjct: 150 GIIHRDLKPENILLNEDM--HIQITDFGTAK--VLSPESKQARANXFVGTAQYVSPELLT 205
Query: 173 KKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLE 232
+K K +D+W+ G +Y ++ G PF + F+K I+ + Y FP+ + +
Sbjct: 206 EKS-ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQK----IIKLEYDFPE--KFFPK 258
Query: 233 CKHLLSRIFVANSEKRITIPE------IKNHPWF 260
+ L+ ++ V ++ KR+ E +K HP+F
Sbjct: 259 ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 292
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 133/274 (48%), Gaps = 26/274 (9%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDE----HVQREIMNHRSLKH 57
E ++ K +G G+F L R+ T A+K +E+ I E +V RE L H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSM 117
P V+ L + YA GEL + I G F E RF+ +++S + Y H
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 118 QICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST-----VGTPAYIAPEVLT 172
I HRDLK EN LL+ ++I DFG +K VL + K VGT Y++PE+LT
Sbjct: 150 GIIHRDLKPENILLNEDM--HIQITDFGTAK--VLSPESKQARANAFVGTAQYVSPELLT 205
Query: 173 KKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLE 232
+K K +D+W+ G +Y ++ G PF + F+K I+ + Y FP+ + +
Sbjct: 206 EKS-ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQK----IIKLEYDFPE--KFFPK 258
Query: 233 CKHLLSRIFVANSEKRITIPE------IKNHPWF 260
+ L+ ++ V ++ KR+ E +K HP+F
Sbjct: 259 ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 292
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 132/274 (48%), Gaps = 26/274 (9%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDE----HVQREIMNHRSLKH 57
E ++ K +G G+F L R+ T A+K +E+ I E +V RE L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSM 117
P V+ L + YA GEL + I G F E RF+ +++S + Y H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 118 QICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST-----VGTPAYIAPEVLT 172
I HRDLK EN LL+ ++I DFG +K VL + K VGT Y++PE+LT
Sbjct: 152 GIIHRDLKPENILLNEDM--HIQITDFGTAK--VLSPESKQARANXFVGTAQYVSPELLT 207
Query: 173 KKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLE 232
+K K +D+W+ G +Y ++ G PF + F K I+ + Y FP+ + +
Sbjct: 208 EKSAX-KSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAK----IIKLEYDFPE--KFFPK 260
Query: 233 CKHLLSRIFVANSEKRITIPE------IKNHPWF 260
+ L+ ++ V ++ KR+ E +K HP+F
Sbjct: 261 ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 294
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 133/274 (48%), Gaps = 26/274 (9%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDE----HVQREIMNHRSLKH 57
E ++ K +G G+F L R+ T A+K +E+ I E +V RE L H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSM 117
P V+ L + YA GEL + I G F E RF+ +++S + Y H
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 118 QICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST-----VGTPAYIAPEVLT 172
I HRDLK EN LL+ ++I DFG +K VL + K VGT Y++PE+LT
Sbjct: 150 GIIHRDLKPENILLNEDM--HIQITDFGTAK--VLSPESKQARANXFVGTAQYVSPELLT 205
Query: 173 KKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLE 232
+K K +D+W+ G +Y ++ G PF + F+K I+ + Y FP+ + +
Sbjct: 206 EKS-ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQK----IIKLEYDFPE--KFFPK 258
Query: 233 CKHLLSRIFVANSEKRITIPE------IKNHPWF 260
+ L+ ++ V ++ KR+ E +K HP+F
Sbjct: 259 ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 292
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 133/274 (48%), Gaps = 26/274 (9%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDE----HVQREIMNHRSLKH 57
E ++ K +G G+F L R+ T A+K +E+ I E +V RE L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSM 117
P V+ L + YA GEL + I G F E RF+ +++S + Y H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 118 QICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST-----VGTPAYIAPEVLT 172
I HRDLK EN LL+ ++I DFG +K VL + K VGT Y++PE+LT
Sbjct: 152 GIIHRDLKPENILLNEDM--HIQITDFGTAK--VLSPESKQARANXFVGTAQYVSPELLT 207
Query: 173 KKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLE 232
+K K +D+W+ G +Y ++ G PF + F+K I+ + Y FP+ + +
Sbjct: 208 EKS-ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQK----IIKLEYDFPE--KFFPK 260
Query: 233 CKHLLSRIFVANSEKRITIPE------IKNHPWF 260
+ L+ ++ V ++ KR+ E +K HP+F
Sbjct: 261 ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 294
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 133/274 (48%), Gaps = 26/274 (9%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDE----HVQREIMNHRSLKH 57
E ++ K +G G+F L R+ T A+K +E+ I E +V RE L H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSM 117
P V+ L + YA GEL + I G F E RF+ +++S + Y H
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 118 QICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST-----VGTPAYIAPEVLT 172
I HRDLK EN LL+ ++I DFG +K VL + K VGT Y++PE+LT
Sbjct: 149 GIIHRDLKPENILLNEDM--HIQITDFGTAK--VLSPESKQARANXFVGTAQYVSPELLT 204
Query: 173 KKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLE 232
+K K +D+W+ G +Y ++ G PF + F+K I+ + Y FP+ + +
Sbjct: 205 EKS-ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQK----IIKLEYDFPE--KFFPK 257
Query: 233 CKHLLSRIFVANSEKRITIPE------IKNHPWF 260
+ L+ ++ V ++ KR+ E +K HP+F
Sbjct: 258 ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 291
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 133/274 (48%), Gaps = 26/274 (9%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDE----HVQREIMNHRSLKH 57
E ++ K +G G+F L R+ T A+K +E+ I E +V RE L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSM 117
P V+ L + YA GEL + I G F E RF+ +++S + Y H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 118 QICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST-----VGTPAYIAPEVLT 172
I HRDLK EN LL+ ++I DFG +K VL + K VGT Y++PE+LT
Sbjct: 152 GIIHRDLKPENILLNEDM--HIQITDFGTAK--VLSPESKQARANXFVGTAQYVSPELLT 207
Query: 173 KKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLE 232
+K K +D+W+ G +Y ++ G PF + F+K I+ + Y FP+ + +
Sbjct: 208 EKS-ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQK----IIKLEYDFPE--KFFPK 260
Query: 233 CKHLLSRIFVANSEKRITIPE------IKNHPWF 260
+ L+ ++ V ++ KR+ E +K HP+F
Sbjct: 261 ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 294
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 117 bits (293), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 133/274 (48%), Gaps = 26/274 (9%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDE----HVQREIMNHRSLKH 57
E ++ K +G G+F L R+ T A+K +E+ I E +V RE L H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSM 117
P V+ L + YA GEL + I G F E RF+ +++S + Y H
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 118 QICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST-----VGTPAYIAPEVLT 172
I HRDLK EN LL+ ++I DFG +K VL + K VGT Y++PE+LT
Sbjct: 153 GIIHRDLKPENILLNEDM--HIQITDFGTAK--VLSPESKQARANXFVGTAQYVSPELLT 208
Query: 173 KKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLE 232
+K K +D+W+ G +Y ++ G PF + F+K I+ + Y FP+ + +
Sbjct: 209 EKS-ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQK----IIKLEYDFPE--KFFPK 261
Query: 233 CKHLLSRIFVANSEKRITIPE------IKNHPWF 260
+ L+ ++ V ++ KR+ E +K HP+F
Sbjct: 262 ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 295
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 117 bits (293), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 133/274 (48%), Gaps = 26/274 (9%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDE----HVQREIMNHRSLKH 57
E ++ K +G G+F L R+ T A+K +E+ I E +V RE L H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSM 117
P V+ L + YA GEL + I G F E RF+ +++S + Y H
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 118 QICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST-----VGTPAYIAPEVLT 172
I HRDLK EN LL+ ++I DFG +K VL + K VGT Y++PE+LT
Sbjct: 150 GIIHRDLKPENILLNEDM--HIQITDFGTAK--VLSPESKQARANXFVGTAQYVSPELLT 205
Query: 173 KKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLE 232
+K K +D+W+ G +Y ++ G PF + F+K I+ + Y FP+ + +
Sbjct: 206 EKS-ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQK----IIKLEYDFPE--KFFPK 258
Query: 233 CKHLLSRIFVANSEKRITIPE------IKNHPWF 260
+ L+ ++ V ++ KR+ E +K HP+F
Sbjct: 259 ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 292
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 117 bits (293), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 133/274 (48%), Gaps = 26/274 (9%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDE----HVQREIMNHRSLKH 57
E ++ K +G G+F L R+ T A+K +E+ I E +V RE L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSM 117
P V+ L + YA GEL + I G F E RF+ +++S + Y H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 118 QICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST-----VGTPAYIAPEVLT 172
I HRDLK EN LL+ ++I DFG +K VL + K VGT Y++PE+LT
Sbjct: 152 GIIHRDLKPENILLNEDM--HIQITDFGTAK--VLSPESKQARANXFVGTAQYVSPELLT 207
Query: 173 KKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLE 232
+K K +D+W+ G +Y ++ G PF + F+K I+ + Y FP+ + +
Sbjct: 208 EKS-ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQK----IIKLEYDFPE--KFFPK 260
Query: 233 CKHLLSRIFVANSEKRITIPE------IKNHPWF 260
+ L+ ++ V ++ KR+ E +K HP+F
Sbjct: 261 ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 294
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 117 bits (293), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 133/274 (48%), Gaps = 26/274 (9%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDE----HVQREIMNHRSLKH 57
E ++ K +G G+F L R+ T A+K +E+ I E +V RE L H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSM 117
P V+ L + YA GEL + I G F E RF+ +++S + Y H
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 133
Query: 118 QICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST-----VGTPAYIAPEVLT 172
I HRDLK EN LL+ ++I DFG +K VL + K VGT Y++PE+LT
Sbjct: 134 GIIHRDLKPENILLNEDM--HIQITDFGTAK--VLSPESKQARANXFVGTAQYVSPELLT 189
Query: 173 KKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLE 232
+K K +D+W+ G +Y ++ G PF + F+K I+ + Y FP+ + +
Sbjct: 190 EKS-ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQK----IIKLEYDFPE--KFFPK 242
Query: 233 CKHLLSRIFVANSEKRITIPE------IKNHPWF 260
+ L+ ++ V ++ KR+ E +K HP+F
Sbjct: 243 ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 276
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/274 (32%), Positives = 140/274 (51%), Gaps = 26/274 (9%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID------EHVQREIMNHRSLKH 57
YE+ + IG G F V + ++ T + AVK ++ + E ++RE LKH
Sbjct: 28 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 87
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGEL-FERI--CNAG-RFSEDEARFFFQQLISGVSY 113
P+IV E + L +V E+ G +L FE + +AG +SE A + +Q++ + Y
Sbjct: 88 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 147
Query: 114 CHSMQICHRDLKLENTLLDG--STAPRVKICDFGYS----KSSVLHSQPKSTVGTPAYIA 167
CH I HRD+K LL ++AP VK+ FG + +S ++ VGTP ++A
Sbjct: 148 CHDNNIIHRDVKPHCVLLASKENSAP-VKLGGFGVAIQLGESGLVAG---GRVGTPHFMA 203
Query: 168 PEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFP-DY 226
PEV+ ++ Y GK DVW CGV L+++L G PF ++ R G I + P +
Sbjct: 204 PEVVKREPY-GKPVDVWGCGVILFILLSGCLPFYGTKE----RLFEGIIKGKYKMNPRQW 258
Query: 227 VRVSLECKHLLSRIFVANSEKRITIPEIKNHPWF 260
+S K L+ R+ + + +RIT+ E NHPW
Sbjct: 259 SHISESAKDLVRRMLMLDPAERITVYEALNHPWL 292
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 133/274 (48%), Gaps = 26/274 (9%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDE----HVQREIMNHRSLKH 57
E ++ K +G G+F L R+ T A+K +E+ I E +V RE L H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSM 117
P V+ L + YA GEL + I G F E RF+ +++S + Y H
Sbjct: 97 PFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 156
Query: 118 QICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST-----VGTPAYIAPEVLT 172
I HRDLK EN LL+ ++I DFG +K VL + K VGT Y++PE+LT
Sbjct: 157 GIIHRDLKPENILLNEDM--HIQITDFGTAK--VLSPESKQARANXFVGTAQYVSPELLT 212
Query: 173 KKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLE 232
+K K +D+W+ G +Y ++ G PF + F+K I+ + Y FP+ + +
Sbjct: 213 EKS-ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQK----IIKLEYDFPE--KFFPK 265
Query: 233 CKHLLSRIFVANSEKRITIPE------IKNHPWF 260
+ L+ ++ V ++ KR+ E +K HP+F
Sbjct: 266 ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 299
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 132/274 (48%), Gaps = 26/274 (9%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDE----HVQREIMNHRSLKH 57
E ++ K +G G+F L R+ T A+K +E+ I E +V RE L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSM 117
P V+ L + YA GEL + I G F E RF+ +++S + Y H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 118 QICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST-----VGTPAYIAPEVLT 172
I HRDLK EN LL+ ++I DFG +K VL + K VGT Y++PE+LT
Sbjct: 152 GIIHRDLKPENILLNEDM--HIQITDFGTAK--VLSPESKQARANXFVGTAQYVSPELLT 207
Query: 173 KKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLE 232
+K K +D+W+ G +Y ++ G PF + F K I+ + Y FP+ + +
Sbjct: 208 EKS-ACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAK----IIKLEYDFPE--KFFPK 260
Query: 233 CKHLLSRIFVANSEKRITIPE------IKNHPWF 260
+ L+ ++ V ++ KR+ E +K HP+F
Sbjct: 261 ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 294
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 133/274 (48%), Gaps = 26/274 (9%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDE----HVQREIMNHRSLKH 57
E ++ K +G G+F L R+ T A+K +E+ I E +V RE L H
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSM 117
P V+ L + YA GEL + I G F E RF+ +++S + Y H
Sbjct: 67 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 126
Query: 118 QICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST-----VGTPAYIAPEVLT 172
I HRDLK EN LL+ ++I DFG +K VL + K VGT Y++PE+LT
Sbjct: 127 GIIHRDLKPENILLNEDM--HIQITDFGTAK--VLSPESKQARANXFVGTAQYVSPELLT 182
Query: 173 KKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLE 232
+K K +D+W+ G +Y ++ G PF + F+K I+ + Y FP+ + +
Sbjct: 183 EKS-ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQK----IIKLEYDFPE--KFFPK 235
Query: 233 CKHLLSRIFVANSEKRITIPE------IKNHPWF 260
+ L+ ++ V ++ KR+ E +K HP+F
Sbjct: 236 ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 269
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 133/274 (48%), Gaps = 26/274 (9%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDE----HVQREIMNHRSLKH 57
E ++ K +G G+F L R+ T A+K +E+ I E +V RE L H
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 68
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSM 117
P V+ L + YA GEL + I G F E RF+ +++S + Y H
Sbjct: 69 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 128
Query: 118 QICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST-----VGTPAYIAPEVLT 172
I HRDLK EN LL+ ++I DFG +K VL + K VGT Y++PE+LT
Sbjct: 129 GIIHRDLKPENILLNEDM--HIQITDFGTAK--VLSPESKQARANXFVGTAQYVSPELLT 184
Query: 173 KKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLE 232
+K K +D+W+ G +Y ++ G PF + F+K I+ + Y FP+ + +
Sbjct: 185 EKS-ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQK----IIKLEYDFPE--KFFPK 237
Query: 233 CKHLLSRIFVANSEKRITIPE------IKNHPWF 260
+ L+ ++ V ++ KR+ E +K HP+F
Sbjct: 238 ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 271
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 133/274 (48%), Gaps = 26/274 (9%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDE----HVQREIMNHRSLKH 57
E ++ K +G G+F L R+ T A+K +E+ I E +V RE L H
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSM 117
P V+ L + YA GEL + I G F E RF+ +++S + Y H
Sbjct: 68 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 127
Query: 118 QICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST-----VGTPAYIAPEVLT 172
I HRDLK EN LL+ ++I DFG +K VL + K VGT Y++PE+LT
Sbjct: 128 GIIHRDLKPENILLNEDM--HIQITDFGTAK--VLSPESKQARANXFVGTAQYVSPELLT 183
Query: 173 KKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLE 232
+K K +D+W+ G +Y ++ G PF + F+K I+ + Y FP+ + +
Sbjct: 184 EKS-ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQK----IIKLEYDFPE--KFFPK 236
Query: 233 CKHLLSRIFVANSEKRITIPE------IKNHPWF 260
+ L+ ++ V ++ KR+ E +K HP+F
Sbjct: 237 ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 270
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 133/274 (48%), Gaps = 26/274 (9%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDE----HVQREIMNHRSLKH 57
E ++ K +G G+F L R+ T A+K +E+ I E +V RE L H
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 69
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSM 117
P V+ L + YA GEL + I G F E RF+ +++S + Y H
Sbjct: 70 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 129
Query: 118 QICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST-----VGTPAYIAPEVLT 172
I HRDLK EN LL+ ++I DFG +K VL + K VGT Y++PE+LT
Sbjct: 130 GIIHRDLKPENILLNEDM--HIQITDFGTAK--VLSPESKQARANXFVGTAQYVSPELLT 185
Query: 173 KKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLE 232
+K K +D+W+ G +Y ++ G PF + F+K I+ + Y FP+ + +
Sbjct: 186 EKS-ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQK----IIKLEYDFPE--KFFPK 238
Query: 233 CKHLLSRIFVANSEKRITIPE------IKNHPWF 260
+ L+ ++ V ++ KR+ E +K HP+F
Sbjct: 239 ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 272
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 138/274 (50%), Gaps = 26/274 (9%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID------EHVQREIMNHRSLKH 57
YE+ + IG G F V + ++ T + AVK ++ + E ++RE LKH
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGEL-FERICNAGR---FSEDEARFFFQQLISGVSY 113
P+IV E + L +V E+ G +L FE + A +SE A + +Q++ + Y
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 114 CHSMQICHRDLKLENTLLDG--STAPRVKICDFGYS----KSSVLHSQPKSTVGTPAYIA 167
CH I HRD+K LL ++AP VK+ FG + +S ++ VGTP ++A
Sbjct: 146 CHDNNIIHRDVKPHCVLLASKENSAP-VKLGGFGVAIQLGESGLVAG---GRVGTPHFMA 201
Query: 168 PEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFP-DY 226
PEV+ ++ Y GK DVW CGV L+++L G PF ++ R G I + P +
Sbjct: 202 PEVVKREPY-GKPVDVWGCGVILFILLSGCLPFYGTKE----RLFEGIIKGKYKMNPRQW 256
Query: 227 VRVSLECKHLLSRIFVANSEKRITIPEIKNHPWF 260
+S K L+ R+ + + +RIT+ E NHPW
Sbjct: 257 SHISESAKDLVRRMLMLDPAERITVYEALNHPWL 290
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 134/279 (48%), Gaps = 25/279 (8%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE---------RGQKIDEHVQREIMNH 52
++Y+ IG G V + + T AVK +E + +++ E +RE
Sbjct: 94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHIL 153
Query: 53 RSLK-HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGV 111
R + HP+I+ + + + + +V + GELF+ + SE E R + L+ V
Sbjct: 154 RQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAV 213
Query: 112 SYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL 171
S+ H+ I HRDLK EN LLD + ++++ DFG+S + + GTP Y+APE+L
Sbjct: 214 SFLHANNIVHRDLKPENILLDDNM--QIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEIL 271
Query: 172 ------TKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSF-- 223
T Y GK D+W+CGV L+ +L G+ PF R I+ Y F
Sbjct: 272 KCSMDETHPGY-GKEVDLWACGVILFTLLAGSPPFWHRRQILMLRM----IMEGQYQFSS 326
Query: 224 PDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLR 262
P++ S K L+SR+ + E R+T + HP+F R
Sbjct: 327 PEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFER 365
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 142/279 (50%), Gaps = 25/279 (8%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRD---KWTRELLAVKFIERGQ-----KIDEHV--QREIM 50
+E +E++K +G+G +G LVR T +L A+K +++ K EH +R+++
Sbjct: 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVL 112
Query: 51 NHRSLKHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISG 110
H + P +V T T L ++++Y GGELF + RF+E E + + +++
Sbjct: 113 EHIR-QSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLA 171
Query: 111 VSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--VGTPAYIAP 168
+ + H + I +RD+KLEN LLD + V + DFG SK V ++ GT Y+AP
Sbjct: 172 LEHLHKLGIIYRDIKLENILLDSN--GHVVLTDFGLSKEFVADETERAYDFCGTIEYMAP 229
Query: 169 EVLTKKEYD-GKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIG-RILSVHYSFPDY 226
+++ + K D WS GV +Y +L GA PF + KN + I RIL +P
Sbjct: 230 DIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFT-VDGEKNSQAEISRRILKSEPPYPQ- 287
Query: 227 VRVSLECKHLLSRIFVANSEKRI-----TIPEIKNHPWF 260
+S K L+ R+ + + +KR+ EIK H +F
Sbjct: 288 -EMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFF 325
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 135/289 (46%), Gaps = 24/289 (8%)
Query: 8 KDIGSGNFGVAKLVRDKWTRELLAVKFIE---RGQKIDEHVQREIMNHRSLKH-PNIVRF 63
K++G G F V + K T + A KF++ RGQ + EI K P ++
Sbjct: 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINL 94
Query: 64 KEVLLTPTHLAIVMEYAAGGELFERICN---AGRFSEDEARFFFQQLISGVSYCHSMQIC 120
EV + + +++EYAAGGE+F +C A SE++ +Q++ GV Y H I
Sbjct: 95 HEVYENTSEIILILEYAAGGEIF-SLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIV 153
Query: 121 HRDLKLENTLLDGSTAP--RVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYD- 177
H DLK +N LL S P +KI DFG S+ + + +GTP Y+APE+L YD
Sbjct: 154 HLDLKPQNILL-SSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILN---YDP 209
Query: 178 -GKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHL 236
D+W+ G+ Y++L PF ED + I ++ +V YS + VS
Sbjct: 210 ITTATDMWNIGIIAYMLLTHTSPFVG-EDNQETYLNISQV-NVDYSEETFSSVSQLATDF 267
Query: 237 LSRIFVANSEKRITIPEIKNHPWF----LRNL--PIELTEGGSWQSHDV 279
+ + V N EKR T +H W NL P E + Q H V
Sbjct: 268 IQSLLVKNPEKRPTAEICLSHSWLQQWDFENLFHPEETSSSSQTQDHSV 316
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 131/274 (47%), Gaps = 26/274 (9%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDE----HVQREIMNHRSLKH 57
E ++ K +G G+F L R+ T A+K +E+ I E +V RE L H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSM 117
P V+ L + YA GEL + I G F E RF+ +++S + Y H
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 154
Query: 118 QICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST-----VGTPAYIAPEVLT 172
I HRDLK EN LL+ ++I DFG +K VL + K VGT Y++PE+LT
Sbjct: 155 GIIHRDLKPENILLNEDM--HIQITDFGTAK--VLSPESKQARANXFVGTAQYVSPELLT 210
Query: 173 KKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLE 232
+K K +D+W+ G +Y ++ G PF + F+K I+ + Y FP +
Sbjct: 211 EKS-ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQK----IIKLEYDFP--AAFFPK 263
Query: 233 CKHLLSRIFVANSEKRITIPE------IKNHPWF 260
+ L+ ++ V ++ KR+ E +K HP+F
Sbjct: 264 ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 297
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 133/274 (48%), Gaps = 26/274 (9%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDE----HVQREIMNHRSLKH 57
E ++ K +G G+F L R+ T A+K +E+ I E +V RE L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSM 117
P V+ L + YA G L + I G F E RF+ +++S + Y H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 118 QICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPK-----STVGTPAYIAPEVLT 172
I HRDLK EN LL+ ++I DFG +K VL + K S VGT Y++PE+LT
Sbjct: 152 GIIHRDLKPENILLNEDM--HIQITDFGTAK--VLSPESKQARANSFVGTAQYVSPELLT 207
Query: 173 KKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLE 232
+K K +D+W+ G +Y ++ G PF + F+K I+ + Y FP+ + +
Sbjct: 208 EKS-ASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQK----IIKLEYDFPE--KFFPK 260
Query: 233 CKHLLSRIFVANSEKRITIPE------IKNHPWF 260
+ L+ ++ V ++ KR+ E +K HP+F
Sbjct: 261 ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 294
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 120/240 (50%), Gaps = 18/240 (7%)
Query: 39 QKIDEHVQREIMNHRSLKHPNIVRFKEVLLTPTH----LAIVMEYAAGGELFERICNAG- 93
Q++D H Q + P+IV +V H L I+ME GGELF RI G
Sbjct: 70 QEVDHHWQ-------ASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGD 122
Query: 94 -RFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRV-KICDFGYSKSSV 151
F+E EA + + + + + HS I HRD+K EN L V K+ DFG++K +
Sbjct: 123 QAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT 182
Query: 152 LHSQPKSTVGTPAYIAPEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRK 211
++ ++ TP Y+APEVL ++YD K D+WS GV +Y++L G PF
Sbjct: 183 QNAL-QTPCYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCGFPPFYSNTGQAISPG 240
Query: 212 TIGRILSVHYSFPD--YVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLRNLPIELT 269
RI Y FP+ + VS + K L+ + + +R+TI + NHPW +++ + T
Sbjct: 241 MKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQT 300
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 120/240 (50%), Gaps = 18/240 (7%)
Query: 39 QKIDEHVQREIMNHRSLKHPNIVRFKEVLLTPTH----LAIVMEYAAGGELFERICNAG- 93
Q++D H Q + P+IV +V H L I+ME GGELF RI G
Sbjct: 51 QEVDHHWQ-------ASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGD 103
Query: 94 -RFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRV-KICDFGYSKSSV 151
F+E EA + + + + + HS I HRD+K EN L V K+ DFG++K +
Sbjct: 104 QAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT 163
Query: 152 LHSQPKSTVGTPAYIAPEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRK 211
++ ++ TP Y+APEVL ++YD K D+WS GV +Y++L G PF
Sbjct: 164 QNAL-QTPCYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCGFPPFYSNTGQAISPG 221
Query: 212 TIGRILSVHYSFPD--YVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLRNLPIELT 269
RI Y FP+ + VS + K L+ + + +R+TI + NHPW +++ + T
Sbjct: 222 MKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQT 281
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 104/206 (50%), Gaps = 11/206 (5%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFI-----ERGQKIDEHVQREIMNHRSLK 56
ERY+IV +G G L D +A+K I E+ + + + +RE+ N L
Sbjct: 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETL-KRFEREVHNSSQLS 69
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
H NIV +V +VMEY G L E I + G S D A F Q++ G+ + H
Sbjct: 70 HQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHD 129
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSK--SSVLHSQPKSTVGTPAYIAPEVLTKK 174
M+I HRD+K +N L+D + +KI DFG +K S +Q +GT Y +PE K
Sbjct: 130 MRIVHRDIKPQNILIDSNKT--LKIFDFGIAKALSETSLTQTNHVLGTVQYFSPE-QAKG 186
Query: 175 EYDGKIADVWSCGVTLYVMLVGAYPF 200
E + D++S G+ LY MLVG PF
Sbjct: 187 EATDECTDIYSIGIVLYEMLVGEPPF 212
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 147/312 (47%), Gaps = 46/312 (14%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDE------HVQREIMNHRSL 55
E +EI+K IG G FG +V+ K T + A+K + + + + +R+++ +
Sbjct: 90 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDC 149
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICN-AGRFSEDEARFFFQQLISGVSYC 114
+ I HL +VM+Y GG+L + + ED ARF+ +++ +
Sbjct: 150 QW--ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSI 207
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFG--YSKSSVLHSQPKSTVGTPAYIAPEVLT 172
H + HRD+K +N LLD +++ DFG + Q VGTP YI+PE+L
Sbjct: 208 HQLHYVHRDIKPDNVLLD--VNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQ 265
Query: 173 KKEYD----GKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILS--VHYSFPDY 226
E G D WS GV +Y ML G PF ++ +T G+I++ + FP +
Sbjct: 266 AMEDGMGKYGPECDWWSLGVCMYEMLYGETPFY----AESLVETYGKIMNHEERFQFPSH 321
Query: 227 VR-VSLECKHLLSRIFVANSEKRI---TIPEIKNHPWFLRNLPIELTEGGSWQS------ 276
V VS E K L+ R+ + + E+R+ I + K H +F EG +W++
Sbjct: 322 VTDVSEEAKDLIQRL-ICSRERRLGQNGIEDFKKHAFF---------EGLNWENIRNLEA 371
Query: 277 ---HDVNNPSQS 285
DV++PS +
Sbjct: 372 PYIPDVSSPSDT 383
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 126/245 (51%), Gaps = 10/245 (4%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFI-ERGQKIDEHVQREIMNHRSLKHPNIVRFKEVLL 68
+G G +G+ RD + +A+K I ER + + + EI H+ LKH NIV++
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 69 TPTHLAIVMEYAAGGELFERI-CNAGRFSEDEAR--FFFQQLISGVSYCHSMQICHRDLK 125
+ I ME GG L + G ++E F+ +Q++ G+ Y H QI HRD+K
Sbjct: 76 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIK 135
Query: 126 LENTLLDGSTAPRVKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLTKKEYD-GKIADV 183
+N L++ + + +KI DFG SK + ++ ++ GT Y+APE++ K GK AD+
Sbjct: 136 GDNVLIN-TYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADI 194
Query: 184 WSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVA 243
WS G T+ M G PF + +P+ +G + VH P+ +S E K + + F
Sbjct: 195 WSLGCTIIEMATGKPPFYELGEPQAAMFKVG-MFKVHPEIPE--SMSAEAKAFILKCFEP 251
Query: 244 NSEKR 248
+ +KR
Sbjct: 252 DPDKR 256
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 147/312 (47%), Gaps = 46/312 (14%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDE------HVQREIMNHRSL 55
E +EI+K IG G FG +V+ K T + A+K + + + + +R+++ +
Sbjct: 74 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDC 133
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICN-AGRFSEDEARFFFQQLISGVSYC 114
+ I HL +VM+Y GG+L + + ED ARF+ +++ +
Sbjct: 134 QW--ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSI 191
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFG--YSKSSVLHSQPKSTVGTPAYIAPEVLT 172
H + HRD+K +N LLD +++ DFG + Q VGTP YI+PE+L
Sbjct: 192 HQLHYVHRDIKPDNVLLD--VNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQ 249
Query: 173 KKEYD----GKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILS--VHYSFPDY 226
E G D WS GV +Y ML G PF ++ +T G+I++ + FP +
Sbjct: 250 AMEDGMGKYGPECDWWSLGVCMYEMLYGETPFY----AESLVETYGKIMNHEERFQFPSH 305
Query: 227 VR-VSLECKHLLSRIFVANSEKRI---TIPEIKNHPWFLRNLPIELTEGGSWQS------ 276
V VS E K L+ R+ + + E+R+ I + K H +F EG +W++
Sbjct: 306 VTDVSEEAKDLIQRL-ICSRERRLGQNGIEDFKKHAFF---------EGLNWENIRNLEA 355
Query: 277 ---HDVNNPSQS 285
DV++PS +
Sbjct: 356 PYIPDVSSPSDT 367
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 124/262 (47%), Gaps = 8/262 (3%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIV 61
E+Y I +D+G G FG+ + +++ KF++ V++EI +H NI+
Sbjct: 5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNIL 64
Query: 62 RFKEVLLTPTHLAIVMEYAAGGELFERI-CNAGRFSEDEARFFFQQLISGVSYCHSMQIC 120
E + L ++ E+ +G ++FERI +A +E E + Q+ + + HS I
Sbjct: 65 HLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIG 124
Query: 121 HRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKI 180
H D++ EN + + +KI +FG ++ + P Y APEV + +
Sbjct: 125 HFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEV-HQHDVVSTA 183
Query: 181 ADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPD--YVRVSLECKHLLS 238
D+WS G +YV+L G PF + ++ I I++ Y+F + + +S+E +
Sbjct: 184 TDMWSLGTLVYVLLSGINPFLAETN----QQIIENIMNAEYTFDEEAFKEISIEAMDFVD 239
Query: 239 RIFVANSEKRITIPEIKNHPWF 260
R+ V + R+T E HPW
Sbjct: 240 RLLVKERKSRMTASEALQHPWL 261
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 129/246 (52%), Gaps = 12/246 (4%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFI-ERGQKIDEHVQREIMNHRSLKHPNIVRFKEVLL 68
+G G +G+ RD + +A+K I ER + + + EI H+ LKH NIV++
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 69 TPTHLAIVMEYAAGGELFERICNA-GRFSEDEAR--FFFQQLISGVSYCHSMQICHRDLK 125
+ I ME GG L + + G ++E F+ +Q++ G+ Y H QI HRD+K
Sbjct: 90 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIK 149
Query: 126 LENTLLDGSTAPRVKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLTK--KEYDGKIAD 182
+N L++ + + +KI DFG SK + ++ ++ GT Y+APE++ K + Y GK AD
Sbjct: 150 GDNVLIN-TYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGY-GKAAD 207
Query: 183 VWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFV 242
+WS G T+ M G PF + +P+ +G + VH P+ +S E K + + F
Sbjct: 208 IWSLGCTIIEMATGKPPFYELGEPQAAMFKVG-MFKVHPEIPE--SMSAEAKAFILKCFE 264
Query: 243 ANSEKR 248
+ +KR
Sbjct: 265 PDPDKR 270
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 139/287 (48%), Gaps = 23/287 (8%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIER-----GQKIDEHVQREIMNHRSL 55
++ +++++ IG G++ LVR K T + A++ +++ + ID + + ++
Sbjct: 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQAS 110
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCH 115
HP +V T + L V+EY GG+L + + E+ ARF+ ++ ++Y H
Sbjct: 111 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 170
Query: 116 SMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLTKK 174
I +RDLKL+N LLD + +K+ D+G K + ST GTP YIAPE+L +
Sbjct: 171 ERGIIYRDLKLDNVLLD--SEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGE 228
Query: 175 EYDGKIADVWSCGVTLYVMLVGAYPFE-----DPEDPKNFRKTIGRILSVHYSFPDYVRV 229
+Y G D W+ GV ++ M+ G PF+ D D IL P +
Sbjct: 229 DY-GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP--RSL 285
Query: 230 SLECKHLLSRIFVANSEKRI------TIPEIKNHPWFLRNLPIELTE 270
S++ +L + ++R+ +I+ HP+F RN+ ++ E
Sbjct: 286 SVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF-RNVDWDMME 331
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 143/301 (47%), Gaps = 30/301 (9%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE-RGQKIDEHVQREIMNHRSLKHPNI 60
++Y + IG G G D T + +A++ + + Q E + EI+ R K+PNI
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI 79
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQIC 120
V + + L L +VMEY AGG L + + E + ++ + + + HS Q+
Sbjct: 80 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC-MDEGQIAAVCRECLQALEFLHSNQVI 138
Query: 121 HRDLKLENTLL--DGSTAPRVKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLTKKEYD 177
HRD+K +N LL DGS VK+ DFG+ +ST VGTP ++APEV+T+K Y
Sbjct: 139 HRDIKSDNILLGMDGS----VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYG 194
Query: 178 GKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHLL 237
K+ D+WS G+ M+ G P+ + E+P I + P+ ++S + L
Sbjct: 195 PKV-DIWSLGIMAIEMIEGEPPYLN-ENPLRALYLIATNGTPELQNPE--KLSAIFRDFL 250
Query: 238 SRIFVANSEKRITIPEIKNHPWFLRNLPIELTEGGSWQSHDVNNPSQSLEEVLSLIHEAT 297
+R + EKR + E+ H FL+ + P SL +++ EAT
Sbjct: 251 NRCLDMDVEKRGSAKELLQHQ-FLK----------------IAKPLSSLTPLIAAAKEAT 293
Query: 298 K 298
K
Sbjct: 294 K 294
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 138/287 (48%), Gaps = 23/287 (8%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIER-----GQKIDEHVQREIMNHRSL 55
++ +++++ IG G++ LVR K T + A+K +++ + ID + + ++
Sbjct: 4 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 63
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCH 115
HP +V T + L V+EY GG+L + + E+ ARF+ ++ ++Y H
Sbjct: 64 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 123
Query: 116 SMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLTKK 174
I +RDLKL+N LLD + +K+ D+G K + S GTP YIAPE+L +
Sbjct: 124 ERGIIYRDLKLDNVLLD--SEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGE 181
Query: 175 EYDGKIADVWSCGVTLYVMLVGAYPFE-----DPEDPKNFRKTIGRILSVHYSFPDYVRV 229
+Y G D W+ GV ++ M+ G PF+ D D IL P +
Sbjct: 182 DY-GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP--RSL 238
Query: 230 SLECKHLLSRIFVANSEKRI------TIPEIKNHPWFLRNLPIELTE 270
S++ +L + ++R+ +I+ HP+F RN+ ++ E
Sbjct: 239 SVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF-RNVDWDMME 284
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 138/287 (48%), Gaps = 23/287 (8%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIER-----GQKIDEHVQREIMNHRSL 55
++ +++++ IG G++ LVR K T + A+K +++ + ID + + ++
Sbjct: 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 67
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCH 115
HP +V T + L V+EY GG+L + + E+ ARF+ ++ ++Y H
Sbjct: 68 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 127
Query: 116 SMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLTKK 174
I +RDLKL+N LLD + +K+ D+G K + S GTP YIAPE+L +
Sbjct: 128 ERGIIYRDLKLDNVLLD--SEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGE 185
Query: 175 EYDGKIADVWSCGVTLYVMLVGAYPFE-----DPEDPKNFRKTIGRILSVHYSFPDYVRV 229
+Y G D W+ GV ++ M+ G PF+ D D IL P +
Sbjct: 186 DY-GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP--RSL 242
Query: 230 SLECKHLLSRIFVANSEKRI------TIPEIKNHPWFLRNLPIELTE 270
S++ +L + ++R+ +I+ HP+F RN+ ++ E
Sbjct: 243 SVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF-RNVDWDMME 288
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 138/287 (48%), Gaps = 23/287 (8%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIER-----GQKIDEHVQREIMNHRSL 55
++ +++++ IG G++ LVR K T + A+K +++ + ID + + ++
Sbjct: 19 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 78
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCH 115
HP +V T + L V+EY GG+L + + E+ ARF+ ++ ++Y H
Sbjct: 79 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 138
Query: 116 SMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLTKK 174
I +RDLKL+N LLD + +K+ D+G K + S GTP YIAPE+L +
Sbjct: 139 ERGIIYRDLKLDNVLLD--SEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGE 196
Query: 175 EYDGKIADVWSCGVTLYVMLVGAYPFE-----DPEDPKNFRKTIGRILSVHYSFPDYVRV 229
+Y G D W+ GV ++ M+ G PF+ D D IL P +
Sbjct: 197 DY-GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP--RSM 253
Query: 230 SLECKHLLSRIFVANSEKRI------TIPEIKNHPWFLRNLPIELTE 270
S++ +L + ++R+ +I+ HP+F RN+ ++ E
Sbjct: 254 SVKAASVLKSFLNKDPKERLGCLPQTGFADIQGHPFF-RNVDWDMME 299
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 133/280 (47%), Gaps = 33/280 (11%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQ---REIMNHRSLKHP 58
E YE++ IG+G++G + +R K ++L K ++ G + Q E+ R LKHP
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65
Query: 59 NIVRFKEVLL--TPTHLAIVMEYAAGGELFERICNAGR----FSEDEARFFFQQLISGVS 112
NIVR+ + ++ T T L IVMEY GG+L I + E+ QL +
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125
Query: 113 YCHSMQ-----ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLH---SQPKSTVGTPA 164
CH + HRDLK N LDG VK+ DFG ++ +L+ S K+ VGTP
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQ--NVKLGDFGLAR--ILNHDTSFAKTFVGTPY 181
Query: 165 YIAPEVLTKKEYDGKIADVWSCGVTLYVMLVGAYP---FEDPEDPKNFRKTIGRILSVHY 221
Y++PE + + Y+ K +D+WS G LY + P F E R+ G+ + Y
Sbjct: 182 YMSPEQMNRMSYNEK-SDIWSLGCLLYELCALMPPFTAFSQKELAGKIRE--GKFRRIPY 238
Query: 222 SFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFL 261
+ D E +++R+ R ++ EI +P L
Sbjct: 239 RYSD------ELNEIITRMLNLKDYHRPSVEEILENPLIL 272
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 133/280 (47%), Gaps = 33/280 (11%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQ---REIMNHRSLKHP 58
E YE++ IG+G++G + +R K ++L K ++ G + Q E+ R LKHP
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65
Query: 59 NIVRFKEVLL--TPTHLAIVMEYAAGGELFERICNAGR----FSEDEARFFFQQLISGVS 112
NIVR+ + ++ T T L IVMEY GG+L I + E+ QL +
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125
Query: 113 YCHSMQ-----ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLH---SQPKSTVGTPA 164
CH + HRDLK N LDG VK+ DFG ++ +L+ S K+ VGTP
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQ--NVKLGDFGLAR--ILNHDTSFAKAFVGTPY 181
Query: 165 YIAPEVLTKKEYDGKIADVWSCGVTLYVMLVGAYP---FEDPEDPKNFRKTIGRILSVHY 221
Y++PE + + Y+ K +D+WS G LY + P F E R+ G+ + Y
Sbjct: 182 YMSPEQMNRMSYNEK-SDIWSLGCLLYELCALMPPFTAFSQKELAGKIRE--GKFRRIPY 238
Query: 222 SFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFL 261
+ D E +++R+ R ++ EI +P L
Sbjct: 239 RYSD------ELNEIITRMLNLKDYHRPSVEEILENPLIL 272
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 145/301 (48%), Gaps = 30/301 (9%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE-RGQKIDEHVQREIMNHRSLKHPNI 60
++Y + IG G G D T + +A++ + + Q E + EI+ R K+PNI
Sbjct: 21 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI 80
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQIC 120
V + + L L +VMEY AGG L + + E + ++ + + + HS Q+
Sbjct: 81 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC-MDEGQIAAVCRECLQALEFLHSNQVI 139
Query: 121 HRDLKLENTLL--DGSTAPRVKICDFGY-SKSSVLHSQPKSTVGTPAYIAPEVLTKKEYD 177
HRD+K +N LL DGS VK+ DFG+ ++ + S+ VGTP ++APEV+T+K Y
Sbjct: 140 HRDIKSDNILLGMDGS----VKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYG 195
Query: 178 GKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHLL 237
K+ D+WS G+ M+ G P+ + E+P I + P+ ++S + L
Sbjct: 196 PKV-DIWSLGIMAIEMIEGEPPYLN-ENPLRALYLIATNGTPELQNPE--KLSAIFRDFL 251
Query: 238 SRIFVANSEKRITIPEIKNHPWFLRNLPIELTEGGSWQSHDVNNPSQSLEEVLSLIHEAT 297
+R + EKR + E+ H FL+ + P SL +++ EAT
Sbjct: 252 NRCLEMDVEKRGSAKELIQHQ-FLK----------------IAKPLSSLTPLIAAAKEAT 294
Query: 298 K 298
K
Sbjct: 295 K 295
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 145/301 (48%), Gaps = 30/301 (9%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE-RGQKIDEHVQREIMNHRSLKHPNI 60
++Y + IG G G D T + +A++ + + Q E + EI+ R K+PNI
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI 79
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQIC 120
V + + L L +VMEY AGG L + + E + ++ + + + HS Q+
Sbjct: 80 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC-MDEGQIAAVCRECLQALEFLHSNQVI 138
Query: 121 HRDLKLENTLL--DGSTAPRVKICDFGY-SKSSVLHSQPKSTVGTPAYIAPEVLTKKEYD 177
HRD+K +N LL DGS VK+ DFG+ ++ + S+ VGTP ++APEV+T+K Y
Sbjct: 139 HRDIKSDNILLGMDGS----VKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYG 194
Query: 178 GKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHLL 237
K+ D+WS G+ M+ G P+ + E+P I + P+ ++S + L
Sbjct: 195 PKV-DIWSLGIMAIEMIEGEPPYLN-ENPLRALYLIATNGTPELQNPE--KLSAIFRDFL 250
Query: 238 SRIFVANSEKRITIPEIKNHPWFLRNLPIELTEGGSWQSHDVNNPSQSLEEVLSLIHEAT 297
+R + EKR + E+ H FL+ + P SL +++ EAT
Sbjct: 251 NRCLEMDVEKRGSAKELLQHQ-FLK----------------IAKPLSSLTPLIAAAKEAT 293
Query: 298 K 298
K
Sbjct: 294 K 294
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 138/258 (53%), Gaps = 13/258 (5%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIE-RGQKIDEHVQREIMNHRSLKHPNIVRFKEVLL 68
IG G+ G+ L R+K + +AVK ++ R Q+ E + E++ R +H N+V + L
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 69 TPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLEN 128
L ++ME+ GG L + I + R +E++ + ++ ++Y H+ + HRD+K ++
Sbjct: 113 VGEELWVLMEFLQGGALTD-IVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDS 171
Query: 129 TL--LDGSTAPRVKICDFGY-SKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKIADVWS 185
L LDG RVK+ DFG+ ++ S + K VGTP ++APEV+++ Y ++ D+WS
Sbjct: 172 ILLTLDG----RVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEV-DIWS 226
Query: 186 CGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANS 245
G+ + M+ G P+ + P K + S + +VS + L R+ V +
Sbjct: 227 LGIMVIEMVDGEPPYFS-DSPVQAMKRLRD--SPPPKLKNSHKVSPVLRDFLERMLVRDP 283
Query: 246 EKRITIPEIKNHPWFLRN 263
++R T E+ +HP+ L+
Sbjct: 284 QERATAQELLDHPFLLQT 301
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 145/301 (48%), Gaps = 30/301 (9%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE-RGQKIDEHVQREIMNHRSLKHPNI 60
++Y + IG G G D T + +A++ + + Q E + EI+ R K+PNI
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI 79
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQIC 120
V + + L L +VMEY AGG L + + E + ++ + + + HS Q+
Sbjct: 80 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC-MDEGQIAAVCRECLQALEFLHSNQVI 138
Query: 121 HRDLKLENTLL--DGSTAPRVKICDFGY-SKSSVLHSQPKSTVGTPAYIAPEVLTKKEYD 177
HRD+K +N LL DGS VK+ DFG+ ++ + S+ VGTP ++APEV+T+K Y
Sbjct: 139 HRDIKSDNILLGMDGS----VKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYG 194
Query: 178 GKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHLL 237
K+ D+WS G+ M+ G P+ + E+P I + P+ ++S + L
Sbjct: 195 PKV-DIWSLGIMAIEMIEGEPPYLN-ENPLRALYLIATNGTPELQNPE--KLSAIFRDFL 250
Query: 238 SRIFVANSEKRITIPEIKNHPWFLRNLPIELTEGGSWQSHDVNNPSQSLEEVLSLIHEAT 297
+R + EKR + E+ H FL+ + P SL +++ EAT
Sbjct: 251 NRCLDMDVEKRGSAKELLQHQ-FLK----------------IAKPLSSLTPLIAAAKEAT 293
Query: 298 K 298
K
Sbjct: 294 K 294
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 143/301 (47%), Gaps = 30/301 (9%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE-RGQKIDEHVQREIMNHRSLKHPNI 60
++Y + IG G G D T + +A++ + + Q E + EI+ R K+PNI
Sbjct: 21 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI 80
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQIC 120
V + + L L +VMEY AGG L + + E + ++ + + + HS Q+
Sbjct: 81 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC-MDEGQIAAVCRECLQALEFLHSNQVI 139
Query: 121 HRDLKLENTLL--DGSTAPRVKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLTKKEYD 177
HR++K +N LL DGS VK+ DFG+ +ST VGTP ++APEV+T+K Y
Sbjct: 140 HRNIKSDNILLGMDGS----VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYG 195
Query: 178 GKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHLL 237
K+ D+WS G+ M+ G P+ + E+P I + P+ ++S + L
Sbjct: 196 PKV-DIWSLGIMAIEMIEGEPPYLN-ENPLRALYLIATNGTPELQNPE--KLSAIFRDFL 251
Query: 238 SRIFVANSEKRITIPEIKNHPWFLRNLPIELTEGGSWQSHDVNNPSQSLEEVLSLIHEAT 297
+R + EKR + E+ H FL+ + P SL +++ EAT
Sbjct: 252 NRCLEMDVEKRGSAKELIQHQ-FLK----------------IAKPLSSLTPLIAAAKEAT 294
Query: 298 K 298
K
Sbjct: 295 K 295
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 129/271 (47%), Gaps = 38/271 (14%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNH-RSLKHPNIVR----FK 64
+G G G + +K T+E A+K ++ K +RE+ H R+ + P+IVR ++
Sbjct: 26 LGLGINGKVLQIFNKRTQEKFALKMLQDCPK----ARREVELHWRASQCPHIVRIVDVYE 81
Query: 65 EVLLTPTHLAIVMEYAAGGELFERICNAG--RFSEDEARFFFQQLISGVSYCHSMQICHR 122
+ L IVME GGELF RI + G F+E EA + + + Y HS+ I HR
Sbjct: 82 NLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHR 141
Query: 123 DLKLENTLLDGSTAPR--VKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKI 180
D+K EN LL S P +K+ DFG++K + T ++YD K
Sbjct: 142 DVKPEN-LLYTSKRPNAILKLTDFGFAKET---------------------TGEKYD-KS 178
Query: 181 ADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPD--YVRVSLECKHLLS 238
D+WS GV +Y++L G PF RI Y FP+ + VS E K L+
Sbjct: 179 CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIR 238
Query: 239 RIFVANSEKRITIPEIKNHPWFLRNLPIELT 269
+ +R+TI E NHPW +++ + T
Sbjct: 239 NLLKTEPTQRMTITEFMNHPWIMQSTKVPQT 269
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 137/301 (45%), Gaps = 26/301 (8%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDE---------HVQREIMNH 52
++Y + +GSG FG DK + + VKFI++ + +++ V EI
Sbjct: 24 QKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAIL 83
Query: 53 RSLKHPNIVRFKEVLLTPTHLAIVME-YAAGGELFERICNAGRFSEDEARFFFQQLISGV 111
++H NI++ ++ +VME + +G +LF I R E A + F+QL+S V
Sbjct: 84 SRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAV 143
Query: 112 SYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL 171
Y I HRD+K EN ++ +K+ DFG + + GT Y APEVL
Sbjct: 144 GYLRLKDIIHRDIKDENIVIAEDFT--IKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVL 201
Query: 172 TKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSL 231
Y G ++WS GVTLY ++ PF + E+ ++H P Y+ VS
Sbjct: 202 MGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVE--------AAIH---PPYL-VSK 249
Query: 232 ECKHLLSRIFVANSEKRITIPEIKNHPWFLRNLPIELTEGGSWQSHDVNNPSQSLEEVLS 291
E L+S + E+R T+ ++ PW + P+ L + + VN P + S
Sbjct: 250 ELMSLVSGLLQPVPERRTTLEKLVTDPWVTQ--PVNLADYTWEEVFRVNKPESGVLSAAS 307
Query: 292 L 292
L
Sbjct: 308 L 308
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 107/221 (48%), Gaps = 20/221 (9%)
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYA-AGGELFERICNAGRFSEDEARFFFQQLISGVSYCH 115
HP ++R + T +V+E +LF+ I G E +R FF Q+++ + +CH
Sbjct: 97 HPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCH 156
Query: 116 SMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLTKK 174
S + HRD+K EN L+D K+ DFG ++LH +P + GT Y PE +++
Sbjct: 157 SRGVVHRDIKDENILIDLRRG-CAKLIDFG--SGALLHDEPYTDFDGTRVYSPPEWISRH 213
Query: 175 EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECK 234
+Y A VWS G+ LY M+ G PFE ++ IL FP + VS +C
Sbjct: 214 QYHALPATVWSLGILLYDMVCGDIPFERDQE----------ILEAELHFPAH--VSPDCC 261
Query: 235 HLLSRIFVANSEKRITIPEIKNHPWF---LRNLPIELTEGG 272
L+ R R ++ EI PW ++P+ ++GG
Sbjct: 262 ALIRRCLAPKPSSRPSLEEILLDPWMQTPAEDVPLNPSKGG 302
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 131/279 (46%), Gaps = 31/279 (11%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQ---REIMNHRSLKHP 58
E YE++ IG+G++G + +R K ++L K ++ G + Q E+ R LKHP
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65
Query: 59 NIVRFKEVLL--TPTHLAIVMEYAAGGELFERICNAGR----FSEDEARFFFQQLISGVS 112
NIVR+ + ++ T T L IVMEY GG+L I + E+ QL +
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125
Query: 113 YCHSMQ-----ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQ--PKSTVGTPAY 165
CH + HRDLK N LDG VK+ DFG ++ + H + K VGTP Y
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQ--NVKLGDFGLAR-ILNHDEDFAKEFVGTPYY 182
Query: 166 IAPEVLTKKEYDGKIADVWSCGVTLYVMLVGAYP---FEDPEDPKNFRKTIGRILSVHYS 222
++PE + + Y+ K +D+WS G LY + P F E R+ G+ + Y
Sbjct: 183 MSPEQMNRMSYNEK-SDIWSLGCLLYELCALMPPFTAFSQKELAGKIRE--GKFRRIPYR 239
Query: 223 FPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFL 261
+ D E +++R+ R ++ EI +P L
Sbjct: 240 YSD------ELNEIITRMLNLKDYHRPSVEEILENPLIL 272
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 121/268 (45%), Gaps = 24/268 (8%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID-------EHVQREI--MNHR 53
+Y++ +GSG FG +A+K +E+ + D V E+ +
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 54 SLKHPNIVRFKEVLLTPTHLAIVMEYAAG-GELFERICNAGRFSEDEARFFFQQLISGVS 112
S ++R + P +++E +LF+ I G E+ AR FF Q++ V
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 157
Query: 113 YCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLT 172
+CH+ + HRD+K EN L+D + +K+ DFG S + + + GT Y PE +
Sbjct: 158 HCHNCGVLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIR 215
Query: 173 KKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLE 232
Y G+ A VWS G+ LY M+ G PFE E+ I+ F RVS E
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE----------IIGGQVFFRQ--RVSXE 263
Query: 233 CKHLLSRIFVANSEKRITIPEIKNHPWF 260
C+HL+ R T EI+NHPW
Sbjct: 264 CQHLIRWCLALRPSDRPTFEEIQNHPWM 291
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 121/268 (45%), Gaps = 24/268 (8%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID-------EHVQREI--MNHR 53
+Y++ +GSG FG +A+K +E+ + D V E+ +
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 54 SLKHPNIVRFKEVLLTPTHLAIVMEYAAG-GELFERICNAGRFSEDEARFFFQQLISGVS 112
S ++R + P +++E +LF+ I G E+ AR FF Q++ V
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 156
Query: 113 YCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLT 172
+CH+ + HRD+K EN L+D + +K+ DFG S + + + GT Y PE +
Sbjct: 157 HCHNCGVLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIR 214
Query: 173 KKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLE 232
Y G+ A VWS G+ LY M+ G PFE E+ I+ F RVS E
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE----------IIGGQVFFRQ--RVSXE 262
Query: 233 CKHLLSRIFVANSEKRITIPEIKNHPWF 260
C+HL+ R T EI+NHPW
Sbjct: 263 CQHLIRWCLALRPSDRPTFEEIQNHPWM 290
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 121/268 (45%), Gaps = 24/268 (8%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID-------EHVQREI--MNHR 53
+Y++ +GSG FG +A+K +E+ + D V E+ +
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 54 SLKHPNIVRFKEVLLTPTHLAIVMEYAAG-GELFERICNAGRFSEDEARFFFQQLISGVS 112
S ++R + P +++E +LF+ I G E+ AR FF Q++ V
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 157
Query: 113 YCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLT 172
+CH+ + HRD+K EN L+D + +K+ DFG S + + + GT Y PE +
Sbjct: 158 HCHNCGVLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIR 215
Query: 173 KKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLE 232
Y G+ A VWS G+ LY M+ G PFE E+ I+ F RVS E
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE----------IIGGQVFFRQ--RVSXE 263
Query: 233 CKHLLSRIFVANSEKRITIPEIKNHPWF 260
C+HL+ R T EI+NHPW
Sbjct: 264 CQHLIRWCLALRPSDRPTFEEIQNHPWM 291
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 121/268 (45%), Gaps = 24/268 (8%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID-------EHVQREI--MNHR 53
+Y++ +GSG FG +A+K +E+ + D V E+ +
Sbjct: 32 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 91
Query: 54 SLKHPNIVRFKEVLLTPTHLAIVMEYAAG-GELFERICNAGRFSEDEARFFFQQLISGVS 112
S ++R + P +++E +LF+ I G E+ AR FF Q++ V
Sbjct: 92 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 151
Query: 113 YCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLT 172
+CH+ + HRD+K EN L+D + +K+ DFG S + + + GT Y PE +
Sbjct: 152 HCHNCGVLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIR 209
Query: 173 KKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLE 232
Y G+ A VWS G+ LY M+ G PFE E+ I+ F RVS E
Sbjct: 210 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE----------IIRGQVFFRQ--RVSXE 257
Query: 233 CKHLLSRIFVANSEKRITIPEIKNHPWF 260
C+HL+ R T EI+NHPW
Sbjct: 258 CQHLIRWCLALRPSDRPTFEEIQNHPWM 285
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 121/268 (45%), Gaps = 24/268 (8%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID-------EHVQREI--MNHR 53
+Y++ +GSG FG +A+K +E+ + D V E+ +
Sbjct: 24 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 83
Query: 54 SLKHPNIVRFKEVLLTPTHLAIVMEYAAG-GELFERICNAGRFSEDEARFFFQQLISGVS 112
S ++R + P +++E +LF+ I G E+ AR FF Q++ V
Sbjct: 84 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 143
Query: 113 YCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLT 172
+CH+ + HRD+K EN L+D + +K+ DFG S + + + GT Y PE +
Sbjct: 144 HCHNCGVLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIR 201
Query: 173 KKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLE 232
Y G+ A VWS G+ LY M+ G PFE E+ I+ F RVS E
Sbjct: 202 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE----------IIRGQVFFRQ--RVSXE 249
Query: 233 CKHLLSRIFVANSEKRITIPEIKNHPWF 260
C+HL+ R T EI+NHPW
Sbjct: 250 CQHLIRWCLALRPSDRPTFEEIQNHPWM 277
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 121/268 (45%), Gaps = 24/268 (8%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID-------EHVQREI--MNHR 53
+Y++ +GSG FG +A+K +E+ + D V E+ +
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 54 SLKHPNIVRFKEVLLTPTHLAIVMEYAAG-GELFERICNAGRFSEDEARFFFQQLISGVS 112
S ++R + P +++E +LF+ I G E+ AR FF Q++ V
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 124
Query: 113 YCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLT 172
+CH+ + HRD+K EN L+D + +K+ DFG S + + + GT Y PE +
Sbjct: 125 HCHNXGVLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIR 182
Query: 173 KKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLE 232
Y G+ A VWS G+ LY M+ G PFE E+ I+ F RVS E
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE----------IIRGQVFFRQ--RVSXE 230
Query: 233 CKHLLSRIFVANSEKRITIPEIKNHPWF 260
C+HL+ R T EI+NHPW
Sbjct: 231 CQHLIRWCLALRPSDRPTFEEIQNHPWM 258
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 121/268 (45%), Gaps = 24/268 (8%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID-------EHVQREI--MNHR 53
+Y++ +GSG FG +A+K +E+ + D V E+ +
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 54 SLKHPNIVRFKEVLLTPTHLAIVMEYAAG-GELFERICNAGRFSEDEARFFFQQLISGVS 112
S ++R + P +++E +LF+ I G E+ AR FF Q++ V
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 144
Query: 113 YCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLT 172
+CH+ + HRD+K EN L+D + +K+ DFG S + + + GT Y PE +
Sbjct: 145 HCHNCGVLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIR 202
Query: 173 KKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLE 232
Y G+ A VWS G+ LY M+ G PFE E+ I+ F RVS E
Sbjct: 203 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE----------IIRGQVFFRQ--RVSXE 250
Query: 233 CKHLLSRIFVANSEKRITIPEIKNHPWF 260
C+HL+ R T EI+NHPW
Sbjct: 251 CQHLIRWCLALRPSDRPTFEEIQNHPWM 278
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 121/268 (45%), Gaps = 24/268 (8%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID-------EHVQREI--MNHR 53
+Y++ +GSG FG +A+K +E+ + D V E+ +
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 54 SLKHPNIVRFKEVLLTPTHLAIVMEYAAG-GELFERICNAGRFSEDEARFFFQQLISGVS 112
S ++R + P +++E +LF+ I G E+ AR FF Q++ V
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 144
Query: 113 YCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLT 172
+CH+ + HRD+K EN L+D + +K+ DFG S + + + GT Y PE +
Sbjct: 145 HCHNCGVLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIR 202
Query: 173 KKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLE 232
Y G+ A VWS G+ LY M+ G PFE E+ I+ F RVS E
Sbjct: 203 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE----------IIRGQVFFRQ--RVSXE 250
Query: 233 CKHLLSRIFVANSEKRITIPEIKNHPWF 260
C+HL+ R T EI+NHPW
Sbjct: 251 CQHLIRWCLALRPXDRPTFEEIQNHPWM 278
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 121/268 (45%), Gaps = 24/268 (8%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID-------EHVQREI--MNHR 53
+Y++ +GSG FG +A+K +E+ + D V E+ +
Sbjct: 52 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 111
Query: 54 SLKHPNIVRFKEVLLTPTHLAIVMEYAAG-GELFERICNAGRFSEDEARFFFQQLISGVS 112
S ++R + P +++E +LF+ I G E+ AR FF Q++ V
Sbjct: 112 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 171
Query: 113 YCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLT 172
+CH+ + HRD+K EN L+D + +K+ DFG S + + + GT Y PE +
Sbjct: 172 HCHNCGVLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIR 229
Query: 173 KKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLE 232
Y G+ A VWS G+ LY M+ G PFE E+ I+ F RVS E
Sbjct: 230 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE----------IIRGQVFFRQ--RVSXE 277
Query: 233 CKHLLSRIFVANSEKRITIPEIKNHPWF 260
C+HL+ R T EI+NHPW
Sbjct: 278 CQHLIRWCLALRPSDRPTFEEIQNHPWM 305
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 121/268 (45%), Gaps = 24/268 (8%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID-------EHVQREI--MNHR 53
+Y++ +GSG FG +A+K +E+ + D V E+ +
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 54 SLKHPNIVRFKEVLLTPTHLAIVMEYAAG-GELFERICNAGRFSEDEARFFFQQLISGVS 112
S ++R + P +++E +LF+ I G E+ AR FF Q++ V
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 157
Query: 113 YCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLT 172
+CH+ + HRD+K EN L+D + +K+ DFG S + + + GT Y PE +
Sbjct: 158 HCHNCGVLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIR 215
Query: 173 KKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLE 232
Y G+ A VWS G+ LY M+ G PFE E+ I+ F RVS E
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE----------IIGGQVFFRQ--RVSSE 263
Query: 233 CKHLLSRIFVANSEKRITIPEIKNHPWF 260
C+HL+ R T EI+NHPW
Sbjct: 264 CQHLIRWCLALRPSDRPTFEEIQNHPWM 291
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 121/268 (45%), Gaps = 24/268 (8%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID-------EHVQREI--MNHR 53
+Y++ +GSG FG +A+K +E+ + D V E+ +
Sbjct: 57 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 116
Query: 54 SLKHPNIVRFKEVLLTPTHLAIVMEYAAG-GELFERICNAGRFSEDEARFFFQQLISGVS 112
S ++R + P +++E +LF+ I G E+ AR FF Q++ V
Sbjct: 117 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 176
Query: 113 YCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLT 172
+CH+ + HRD+K EN L+D + +K+ DFG S + + + GT Y PE +
Sbjct: 177 HCHNCGVLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIR 234
Query: 173 KKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLE 232
Y G+ A VWS G+ LY M+ G PFE E+ I+ F RVS E
Sbjct: 235 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE----------IIRGQVFFRQ--RVSXE 282
Query: 233 CKHLLSRIFVANSEKRITIPEIKNHPWF 260
C+HL+ R T EI+NHPW
Sbjct: 283 CQHLIRWCLALRPSDRPTFEEIQNHPWM 310
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 121/268 (45%), Gaps = 24/268 (8%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID-------EHVQREI--MNHR 53
+Y++ +GSG FG +A+K +E+ + D V E+ +
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 54 SLKHPNIVRFKEVLLTPTHLAIVMEYAAG-GELFERICNAGRFSEDEARFFFQQLISGVS 112
S ++R + P +++E +LF+ I G E+ AR FF Q++ V
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 156
Query: 113 YCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLT 172
+CH+ + HRD+K EN L+D + +K+ DFG S + + + GT Y PE +
Sbjct: 157 HCHNCGVLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIR 214
Query: 173 KKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLE 232
Y G+ A VWS G+ LY M+ G PFE E+ I+ F RVS E
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE----------IIGGQVFFRQ--RVSSE 262
Query: 233 CKHLLSRIFVANSEKRITIPEIKNHPWF 260
C+HL+ R T EI+NHPW
Sbjct: 263 CQHLIRWCLALRPSDRPTFEEIQNHPWM 290
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 121/268 (45%), Gaps = 24/268 (8%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID-------EHVQREI--MNHR 53
+Y++ +GSG FG +A+K +E+ + D V E+ +
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 54 SLKHPNIVRFKEVLLTPTHLAIVMEYAAG-GELFERICNAGRFSEDEARFFFQQLISGVS 112
S ++R + P +++E +LF+ I G E+ AR FF Q++ V
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 157
Query: 113 YCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLT 172
+CH+ + HRD+K EN L+D + +K+ DFG S + + + GT Y PE +
Sbjct: 158 HCHNCGVLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIR 215
Query: 173 KKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLE 232
Y G+ A VWS G+ LY M+ G PFE E+ I+ F RVS E
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE----------IIGGQVFFRQ--RVSSE 263
Query: 233 CKHLLSRIFVANSEKRITIPEIKNHPWF 260
C+HL+ R T EI+NHPW
Sbjct: 264 CQHLIRWCLALRPSDRPTFEEIQNHPWM 291
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 121/268 (45%), Gaps = 24/268 (8%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID-------EHVQREI--MNHR 53
+Y++ +GSG FG +A+K +E+ + D V E+ +
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 54 SLKHPNIVRFKEVLLTPTHLAIVMEYAAG-GELFERICNAGRFSEDEARFFFQQLISGVS 112
S ++R + P +++E +LF+ I G E+ AR FF Q++ V
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 156
Query: 113 YCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLT 172
+CH+ + HRD+K EN L+D + +K+ DFG S + + + GT Y PE +
Sbjct: 157 HCHNCGVLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIR 214
Query: 173 KKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLE 232
Y G+ A VWS G+ LY M+ G PFE E+ I+ F RVS E
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE----------IIGGQVFFRQ--RVSSE 262
Query: 233 CKHLLSRIFVANSEKRITIPEIKNHPWF 260
C+HL+ R T EI+NHPW
Sbjct: 263 CQHLIRWCLALRPSDRPTFEEIQNHPWM 290
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 121/268 (45%), Gaps = 24/268 (8%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID-------EHVQREI--MNHR 53
+Y++ +GSG FG +A+K +E+ + D V E+ +
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 54 SLKHPNIVRFKEVLLTPTHLAIVMEYAAG-GELFERICNAGRFSEDEARFFFQQLISGVS 112
S ++R + P +++E +LF+ I G E+ AR FF Q++ V
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 129
Query: 113 YCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLT 172
+CH+ + HRD+K EN L+D + +K+ DFG S + + + GT Y PE +
Sbjct: 130 HCHNCGVLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIR 187
Query: 173 KKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLE 232
Y G+ A VWS G+ LY M+ G PFE E+ I+ F RVS E
Sbjct: 188 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE----------IIRGQVFFRQ--RVSSE 235
Query: 233 CKHLLSRIFVANSEKRITIPEIKNHPWF 260
C+HL+ R T EI+NHPW
Sbjct: 236 CQHLIRWCLALRPSDRPTFEEIQNHPWM 263
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 121/268 (45%), Gaps = 24/268 (8%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID-------EHVQREI--MNHR 53
+Y++ +GSG FG +A+K +E+ + D V E+ +
Sbjct: 24 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 83
Query: 54 SLKHPNIVRFKEVLLTPTHLAIVMEYAAG-GELFERICNAGRFSEDEARFFFQQLISGVS 112
S ++R + P +++E +LF+ I G E+ AR FF Q++ V
Sbjct: 84 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 143
Query: 113 YCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLT 172
+CH+ + HRD+K EN L+D + +K+ DFG S + + + GT Y PE +
Sbjct: 144 HCHNCGVLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIR 201
Query: 173 KKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLE 232
Y G+ A VWS G+ LY M+ G PFE E+ I+ F RVS E
Sbjct: 202 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE----------IIRGQVFFRQ--RVSSE 249
Query: 233 CKHLLSRIFVANSEKRITIPEIKNHPWF 260
C+HL+ R T EI+NHPW
Sbjct: 250 CQHLIRWCLALRPSDRPTFEEIQNHPWM 277
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 121/268 (45%), Gaps = 24/268 (8%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID-------EHVQREI--MNHR 53
+Y++ +GSG FG +A+K +E+ + D V E+ +
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 54 SLKHPNIVRFKEVLLTPTHLAIVMEYAAG-GELFERICNAGRFSEDEARFFFQQLISGVS 112
S ++R + P +++E +LF+ I G E+ AR FF Q++ V
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 124
Query: 113 YCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLT 172
+CH+ + HRD+K EN L+D + +K+ DFG S + + + GT Y PE +
Sbjct: 125 HCHNCGVLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIR 182
Query: 173 KKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLE 232
Y G+ A VWS G+ LY M+ G PFE E+ I+ F RVS E
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE----------IIGGQVFFRQ--RVSSE 230
Query: 233 CKHLLSRIFVANSEKRITIPEIKNHPWF 260
C+HL+ R T EI+NHPW
Sbjct: 231 CQHLIRWCLALRPSDRPTFEEIQNHPWM 258
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 121/268 (45%), Gaps = 24/268 (8%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID-------EHVQREI--MNHR 53
+Y++ +GSG FG +A+K +E+ + D V E+ +
Sbjct: 52 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 111
Query: 54 SLKHPNIVRFKEVLLTPTHLAIVMEYAAG-GELFERICNAGRFSEDEARFFFQQLISGVS 112
S ++R + P +++E +LF+ I G E+ AR FF Q++ V
Sbjct: 112 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 171
Query: 113 YCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLT 172
+CH+ + HRD+K EN L+D + +K+ DFG S + + + GT Y PE +
Sbjct: 172 HCHNCGVLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIR 229
Query: 173 KKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLE 232
Y G+ A VWS G+ LY M+ G PFE E+ I+ F RVS E
Sbjct: 230 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE----------IIRGQVFFRQ--RVSSE 277
Query: 233 CKHLLSRIFVANSEKRITIPEIKNHPWF 260
C+HL+ R T EI+NHPW
Sbjct: 278 CQHLIRWCLALRPSDRPTFEEIQNHPWM 305
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 121/268 (45%), Gaps = 24/268 (8%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID-------EHVQREI--MNHR 53
+Y++ +GSG FG +A+K +E+ + D V E+ +
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 54 SLKHPNIVRFKEVLLTPTHLAIVMEYAAG-GELFERICNAGRFSEDEARFFFQQLISGVS 112
S ++R + P +++E +LF+ I G E+ AR FF Q++ V
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 144
Query: 113 YCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLT 172
+CH+ + HRD+K EN L+D + +K+ DFG S + + + GT Y PE +
Sbjct: 145 HCHNCGVLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIR 202
Query: 173 KKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLE 232
Y G+ A VWS G+ LY M+ G PFE E+ I+ F RVS E
Sbjct: 203 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE----------IIRGQVFFRQ--RVSSE 250
Query: 233 CKHLLSRIFVANSEKRITIPEIKNHPWF 260
C+HL+ R T EI+NHPW
Sbjct: 251 CQHLIRWCLALRPSDRPTFEEIQNHPWM 278
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 121/268 (45%), Gaps = 24/268 (8%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID-------EHVQREI--MNHR 53
+Y++ +GSG FG +A+K +E+ + D V E+ +
Sbjct: 44 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 103
Query: 54 SLKHPNIVRFKEVLLTPTHLAIVMEYAAG-GELFERICNAGRFSEDEARFFFQQLISGVS 112
S ++R + P +++E +LF+ I G E+ AR FF Q++ V
Sbjct: 104 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 163
Query: 113 YCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLT 172
+CH+ + HRD+K EN L+D + +K+ DFG S + + + GT Y PE +
Sbjct: 164 HCHNCGVLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIR 221
Query: 173 KKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLE 232
Y G+ A VWS G+ LY M+ G PFE E+ I+ F RVS E
Sbjct: 222 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE----------IIRGQVFFRQ--RVSSE 269
Query: 233 CKHLLSRIFVANSEKRITIPEIKNHPWF 260
C+HL+ R T EI+NHPW
Sbjct: 270 CQHLIRWCLALRPSDRPTFEEIQNHPWM 297
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 135/265 (50%), Gaps = 23/265 (8%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIE-RGQKIDEHVQREIMNHRSLKHPNIVRFKEVLL 68
IG G+ G+ + + + +L+AVK ++ R Q+ E + E++ R +H N+V L
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 69 TPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLEN 128
L +VME+ GG L + I R +E++ ++ +S H+ + HRD+K ++
Sbjct: 142 VGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDS 200
Query: 129 TLL--DGSTAPRVKICDFGY-SKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKIADVWS 185
LL DG RVK+ DFG+ ++ S + K VGTP ++APE++++ Y G D+WS
Sbjct: 201 ILLTHDG----RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPY-GPEVDIWS 255
Query: 186 CGVTLYVMLVGAYPFEDPEDPKNFRKTI-----GRILSVHYSFPDYVRVSLECKHLLSRI 240
G+ + M+ G P+ + E P K I R+ ++H +VS K L R+
Sbjct: 256 LGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRLKNLH-------KVSPSLKGFLDRL 307
Query: 241 FVANSEKRITIPEIKNHPWFLRNLP 265
V + +R T E+ HP+ + P
Sbjct: 308 LVRDPAQRATAAELLKHPFLAKAGP 332
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 121/268 (45%), Gaps = 24/268 (8%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID-------EHVQREI--MNHR 53
+Y++ +GSG FG +A+K +E+ + D V E+ +
Sbjct: 9 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 54 SLKHPNIVRFKEVLLTPTHLAIVMEYAAG-GELFERICNAGRFSEDEARFFFQQLISGVS 112
S ++R + P +++E +LF+ I G E+ AR FF Q++ V
Sbjct: 69 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 128
Query: 113 YCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLT 172
+CH+ + HRD+K EN L+D + +K+ DFG S + + + GT Y PE +
Sbjct: 129 HCHNCGVLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIR 186
Query: 173 KKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLE 232
Y G+ A VWS G+ LY M+ G PFE E+ I+ F RVS E
Sbjct: 187 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE----------IIRGQVFFRQ--RVSSE 234
Query: 233 CKHLLSRIFVANSEKRITIPEIKNHPWF 260
C+HL+ R T EI+NHPW
Sbjct: 235 CQHLIRWCLALRPSDRPTFEEIQNHPWM 262
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 121/268 (45%), Gaps = 24/268 (8%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID-------EHVQREI--MNHR 53
+Y++ +GSG FG +A+K +E+ + D V E+ +
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 54 SLKHPNIVRFKEVLLTPTHLAIVMEYAAG-GELFERICNAGRFSEDEARFFFQQLISGVS 112
S ++R + P +++E +LF+ I G E+ AR FF Q++ V
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 156
Query: 113 YCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLT 172
+CH+ + HRD+K EN L+D + +K+ DFG S + + + GT Y PE +
Sbjct: 157 HCHNCGVLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIR 214
Query: 173 KKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLE 232
Y G+ A VWS G+ LY M+ G PFE E+ I+ F RVS E
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE----------IIRGQVFFRQ--RVSSE 262
Query: 233 CKHLLSRIFVANSEKRITIPEIKNHPWF 260
C+HL+ R T EI+NHPW
Sbjct: 263 CQHLIRWCLALRPSDRPTFEEIQNHPWM 290
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 135/265 (50%), Gaps = 23/265 (8%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIE-RGQKIDEHVQREIMNHRSLKHPNIVRFKEVLL 68
IG G+ G+ + + + +L+AVK ++ R Q+ E + E++ R +H N+V L
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 69 TPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLEN 128
L +VME+ GG L + I R +E++ ++ +S H+ + HRD+K ++
Sbjct: 99 VGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDS 157
Query: 129 TLL--DGSTAPRVKICDFGY-SKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKIADVWS 185
LL DG RVK+ DFG+ ++ S + K VGTP ++APE++++ Y G D+WS
Sbjct: 158 ILLTHDG----RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPY-GPEVDIWS 212
Query: 186 CGVTLYVMLVGAYPFEDPEDPKNFRKTI-----GRILSVHYSFPDYVRVSLECKHLLSRI 240
G+ + M+ G P+ + E P K I R+ ++H +VS K L R+
Sbjct: 213 LGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRLKNLH-------KVSPSLKGFLDRL 264
Query: 241 FVANSEKRITIPEIKNHPWFLRNLP 265
V + +R T E+ HP+ + P
Sbjct: 265 LVRDPAQRATAAELLKHPFLAKAGP 289
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 121/268 (45%), Gaps = 24/268 (8%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID-------EHVQREI--MNHR 53
+Y++ +GSG FG +A+K +E+ + D V E+ +
Sbjct: 9 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 54 SLKHPNIVRFKEVLLTPTHLAIVMEYAAG-GELFERICNAGRFSEDEARFFFQQLISGVS 112
S ++R + P +++E +LF+ I G E+ AR FF Q++ V
Sbjct: 69 SSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAVR 128
Query: 113 YCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLT 172
+CH+ + HRD+K EN L+D + +K+ DFG S + + + GT Y PE +
Sbjct: 129 HCHNCGVLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIR 186
Query: 173 KKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLE 232
Y G+ A VWS G+ LY M+ G PFE E+ I+ F RVS E
Sbjct: 187 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE----------IIRGQVFFRQ--RVSSE 234
Query: 233 CKHLLSRIFVANSEKRITIPEIKNHPWF 260
C+HL+ R T EI+NHPW
Sbjct: 235 CQHLIRWCLALRPSDRPTFEEIQNHPWM 262
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 121/268 (45%), Gaps = 24/268 (8%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID-------EHVQREI--MNHR 53
+Y++ +GSG FG +A+K +E+ + D V E+ +
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 54 SLKHPNIVRFKEVLLTPTHLAIVMEYAAG-GELFERICNAGRFSEDEARFFFQQLISGVS 112
S ++R + P +++E +LF+ I G E+ AR FF Q++ V
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 124
Query: 113 YCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLT 172
+CH+ + HRD+K EN L+D + +K+ DFG S + + + GT Y PE +
Sbjct: 125 HCHNCGVLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIR 182
Query: 173 KKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLE 232
Y G+ A VWS G+ LY M+ G PFE E+ I+ F RVS E
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE----------IIRGQVFFRQ--RVSSE 230
Query: 233 CKHLLSRIFVANSEKRITIPEIKNHPWF 260
C+HL+ R T EI+NHPW
Sbjct: 231 CQHLIRWCLALRPSDRPTFEEIQNHPWM 258
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 121/268 (45%), Gaps = 24/268 (8%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID-------EHVQREI--MNHR 53
+Y++ +GSG FG +A+K +E+ + D V E+ +
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 54 SLKHPNIVRFKEVLLTPTHLAIVMEYAAG-GELFERICNAGRFSEDEARFFFQQLISGVS 112
S ++R + P +++E +LF+ I G E+ AR FF Q++ V
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 129
Query: 113 YCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLT 172
+CH+ + HRD+K EN L+D + +K+ DFG S + + + GT Y PE +
Sbjct: 130 HCHNCGVLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIR 187
Query: 173 KKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLE 232
Y G+ A VWS G+ LY M+ G PFE E+ I+ F RVS E
Sbjct: 188 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE----------IIRGQVFFRQ--RVSSE 235
Query: 233 CKHLLSRIFVANSEKRITIPEIKNHPWF 260
C+HL+ R T EI+NHPW
Sbjct: 236 CQHLIRWCLALRPSDRPTFEEIQNHPWM 263
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 121/268 (45%), Gaps = 24/268 (8%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID-------EHVQREI--MNHR 53
+Y++ +GSG FG +A+K +E+ + D V E+ +
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 54 SLKHPNIVRFKEVLLTPTHLAIVMEYAAG-GELFERICNAGRFSEDEARFFFQQLISGVS 112
S ++R + P +++E +LF+ I G E+ AR FF Q++ V
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 129
Query: 113 YCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLT 172
+CH+ + HRD+K EN L+D + +K+ DFG S + + + GT Y PE +
Sbjct: 130 HCHNCGVLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIR 187
Query: 173 KKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLE 232
Y G+ A VWS G+ LY M+ G PFE E+ I+ F RVS E
Sbjct: 188 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE----------IIRGQVFFRQ--RVSSE 235
Query: 233 CKHLLSRIFVANSEKRITIPEIKNHPWF 260
C+HL+ R T EI+NHPW
Sbjct: 236 CQHLIRWCLALRPSDRPTFEEIQNHPWM 263
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 135/265 (50%), Gaps = 23/265 (8%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIE-RGQKIDEHVQREIMNHRSLKHPNIVRFKEVLL 68
IG G+ G+ + + + +L+AVK ++ R Q+ E + E++ R +H N+V L
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 69 TPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLEN 128
L +VME+ GG L + I R +E++ ++ +S H+ + HRD+K ++
Sbjct: 97 VGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDS 155
Query: 129 TLL--DGSTAPRVKICDFGY-SKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKIADVWS 185
LL DG RVK+ DFG+ ++ S + K VGTP ++APE++++ Y G D+WS
Sbjct: 156 ILLTHDG----RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPY-GPEVDIWS 210
Query: 186 CGVTLYVMLVGAYPFEDPEDPKNFRKTI-----GRILSVHYSFPDYVRVSLECKHLLSRI 240
G+ + M+ G P+ + E P K I R+ ++H +VS K L R+
Sbjct: 211 LGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRLKNLH-------KVSPSLKGFLDRL 262
Query: 241 FVANSEKRITIPEIKNHPWFLRNLP 265
V + +R T E+ HP+ + P
Sbjct: 263 LVRDPAQRATAAELLKHPFLAKAGP 287
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 134/278 (48%), Gaps = 26/278 (9%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKI-----DEHVQREIMNHRSLKH 57
+Y + +G G++G K V D T AVK +++ + + +V++EI R L+H
Sbjct: 6 KYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRH 65
Query: 58 PNIVRFKEVLLT--PTHLAIVMEYAAGG--ELFERICNAGRFSEDEARFFFQQLISGVSY 113
N+++ +VL + +VMEY G E+ + + RF +A +F QLI G+ Y
Sbjct: 66 KNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEK-RFPVCQAHGYFCQLIDGLEY 124
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLH-----SQPKSTVGTPAYIAP 168
HS I H+D+K N LL +T +KI G +++ LH +++ G+PA+ P
Sbjct: 125 LHSQGIVHKDIKPGNLLL--TTGGTLKISALGVAEA--LHPFAADDTCRTSQGSPAFQPP 180
Query: 169 EVLTKKE-YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYV 227
E+ + + G D+WS GVTLY + G YPFE N K I Y+ P
Sbjct: 181 EIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEG----DNIYKLFENIGKGSYAIPGDC 236
Query: 228 RVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLRNLP 265
L LL + KR +I +I+ H WF + P
Sbjct: 237 GPPLS--DLLKGMLEYEPAKRFSIRQIRQHSWFRKKHP 272
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 135/265 (50%), Gaps = 23/265 (8%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIE-RGQKIDEHVQREIMNHRSLKHPNIVRFKEVLL 68
IG G+ G+ + + + +L+AVK ++ R Q+ E + E++ R +H N+V L
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 69 TPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLEN 128
L +VME+ GG L + I R +E++ ++ +S H+ + HRD+K ++
Sbjct: 88 VGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDS 146
Query: 129 TLL--DGSTAPRVKICDFGY-SKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKIADVWS 185
LL DG RVK+ DFG+ ++ S + K VGTP ++APE++++ Y G D+WS
Sbjct: 147 ILLTHDG----RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPY-GPEVDIWS 201
Query: 186 CGVTLYVMLVGAYPFEDPEDPKNFRKTI-----GRILSVHYSFPDYVRVSLECKHLLSRI 240
G+ + M+ G P+ + E P K I R+ ++H +VS K L R+
Sbjct: 202 LGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRLKNLH-------KVSPSLKGFLDRL 253
Query: 241 FVANSEKRITIPEIKNHPWFLRNLP 265
V + +R T E+ HP+ + P
Sbjct: 254 LVRDPAQRATAAELLKHPFLAKAGP 278
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 135/265 (50%), Gaps = 23/265 (8%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIE-RGQKIDEHVQREIMNHRSLKHPNIVRFKEVLL 68
IG G+ G+ + + + +L+AVK ++ R Q+ E + E++ R +H N+V L
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 69 TPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLEN 128
L +VME+ GG L + I R +E++ ++ +S H+ + HRD+K ++
Sbjct: 92 VGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDS 150
Query: 129 TLL--DGSTAPRVKICDFGY-SKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKIADVWS 185
LL DG RVK+ DFG+ ++ S + K VGTP ++APE++++ Y G D+WS
Sbjct: 151 ILLTHDG----RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPY-GPEVDIWS 205
Query: 186 CGVTLYVMLVGAYPFEDPEDPKNFRKTI-----GRILSVHYSFPDYVRVSLECKHLLSRI 240
G+ + M+ G P+ + E P K I R+ ++H +VS K L R+
Sbjct: 206 LGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRLKNLH-------KVSPSLKGFLDRL 257
Query: 241 FVANSEKRITIPEIKNHPWFLRNLP 265
V + +R T E+ HP+ + P
Sbjct: 258 LVRDPAQRATAAELLKHPFLAKAGP 282
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 135/265 (50%), Gaps = 23/265 (8%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIE-RGQKIDEHVQREIMNHRSLKHPNIVRFKEVLL 68
IG G+ G+ + + + +L+AVK ++ R Q+ E + E++ R +H N+V L
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 69 TPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLEN 128
L +VME+ GG L + I R +E++ ++ +S H+ + HRD+K ++
Sbjct: 219 VGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDS 277
Query: 129 TLL--DGSTAPRVKICDFGY-SKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKIADVWS 185
LL DG RVK+ DFG+ ++ S + K VGTP ++APE++++ Y G D+WS
Sbjct: 278 ILLTHDG----RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPY-GPEVDIWS 332
Query: 186 CGVTLYVMLVGAYPFEDPEDPKNFRKTI-----GRILSVHYSFPDYVRVSLECKHLLSRI 240
G+ + M+ G P+ + E P K I R+ ++H +VS K L R+
Sbjct: 333 LGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRLKNLH-------KVSPSLKGFLDRL 384
Query: 241 FVANSEKRITIPEIKNHPWFLRNLP 265
V + +R T E+ HP+ + P
Sbjct: 385 LVRDPAQRATAAELLKHPFLAKAGP 409
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 121/268 (45%), Gaps = 24/268 (8%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID-------EHVQREI--MNHR 53
+Y++ +GSG FG +A+K +E+ + D V E+ +
Sbjct: 8 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 67
Query: 54 SLKHPNIVRFKEVLLTPTHLAIVMEYAAG-GELFERICNAGRFSEDEARFFFQQLISGVS 112
S ++R + P +++E +LF+ I G E+ AR FF Q++ V
Sbjct: 68 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 127
Query: 113 YCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLT 172
+CH+ + HRD+K EN L+D + +K+ DFG S + + + GT Y PE +
Sbjct: 128 HCHNCGVLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIR 185
Query: 173 KKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLE 232
Y G+ A VWS G+ LY M+ G PFE E+ I+ F RVS E
Sbjct: 186 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE----------IIRGQVFFRQ--RVSSE 233
Query: 233 CKHLLSRIFVANSEKRITIPEIKNHPWF 260
C+HL+ R T EI+NHPW
Sbjct: 234 CQHLIRWCLALRPSDRPTFEEIQNHPWM 261
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 135/278 (48%), Gaps = 28/278 (10%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDE------HVQREIMNHRSL 55
E +EI+K IG G FG +V+ K ++ A+K + + + + +R+++ +
Sbjct: 74 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDS 133
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICN-AGRFSEDEARFFFQQLISGVSYC 114
K I +L +VM+Y GG+L + R E+ ARF+ +++ +
Sbjct: 134 KW--ITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSV 191
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLT 172
H + HRD+K +N L+D + +++ DFG + +S+ VGTP YI+PE+L
Sbjct: 192 HQLHYVHRDIKPDNILMDMNG--HIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQ 249
Query: 173 KKEYD----GKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILS--VHYSFPDY 226
E G D WS GV +Y ML G PF ++ +T G+I++ + FP
Sbjct: 250 AMEGGKGRYGPECDWWSLGVCMYEMLYGETPFY----AESLVETYGKIMNHKERFQFPTQ 305
Query: 227 VR-VSLECKHLLSRIFVANSEKRI---TIPEIKNHPWF 260
V VS K L+ R+ + + E R+ I + K HP+F
Sbjct: 306 VTDVSENAKDLIRRL-ICSREHRLGQNGIEDFKKHPFF 342
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 97/202 (48%), Gaps = 15/202 (7%)
Query: 60 IVRFKEVLLTPTHLAIVMEYAAG-GELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQ 118
++R + P +++E +LF+ I G E+ AR FF Q++ V +CH+
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 177
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDG 178
+ HRD+K EN L+D + +K+ DFG S + + + GT Y PE + Y G
Sbjct: 178 VLHRDIKDENILIDLNRG-ELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 235
Query: 179 KIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHLLS 238
+ A VWS G+ LY M+ G PFE E+ I+ F RVS EC+HL+
Sbjct: 236 RSAAVWSLGILLYDMVCGDIPFEHDEE----------IIRGQVFFRQ--RVSSECQHLIR 283
Query: 239 RIFVANSEKRITIPEIKNHPWF 260
R T EI+NHPW
Sbjct: 284 WCLALRPSDRPTFEEIQNHPWM 305
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 139/294 (47%), Gaps = 18/294 (6%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFI--ERGQKIDEHVQREIMNHRSLKHPN 59
+ +E + ++G+GN GV V K + ++A K I E I + RE+ P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 60 IVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSM-Q 118
IV F + ++I ME+ GG L + + AGR E +I G++Y +
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 125
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDG 178
I HRD+K N L++ + +K+CDFG S ++ S S VGT +Y++PE L Y
Sbjct: 126 IMHRDVKPSNILVN--SRGEIKLCDFGVS-GQLIDSMANSFVGTRSYMSPERLQGTHYSV 182
Query: 179 KIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHY-------SFPDYVRVSL 231
+ +D+WS G++L M VG YP P+ ++ R + + Y P V SL
Sbjct: 183 Q-SDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSGV-FSL 240
Query: 232 ECKHLLSRIFVANSEKRITIPEIKNHPWFLRNLPIELTEGGSW--QSHDVNNPS 283
E + +++ + N +R + ++ H + R+ E+ G W + +N PS
Sbjct: 241 EFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEVDFAG-WLCSTIGLNQPS 293
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 132/270 (48%), Gaps = 26/270 (9%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE-RGQKIDEHVQREIMNHRSLKHPNIVR 62
+EI+ ++G G FG ++K T L A K I+ + ++ E EI S HPNIV+
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVK 98
Query: 63 FKEVLLTPTHLAIVMEYAAGGELFERICNAGR-FSEDEARFFFQQLISGVSYCHSMQICH 121
+ +L I++E+ AGG + + R +E + + +Q + ++Y H +I H
Sbjct: 99 LLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIH 158
Query: 122 RDLKLENTL--LDGSTAPRVKICDFGYSKSSVLHSQPK-STVGTPAYIAPEVL---TKKE 175
RDLK N L LDG +K+ DFG S + Q + S +GTP ++APEV+ T K+
Sbjct: 159 RDLKAGNILFTLDGD----IKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKD 214
Query: 176 --YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYV----RV 229
YD K ADVWS G+TL M + E P + + +L + S P + R
Sbjct: 215 RPYDYK-ADVWSLGITLIEM-------AEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW 266
Query: 230 SLECKHLLSRIFVANSEKRITIPEIKNHPW 259
S K L + N + R T ++ HP+
Sbjct: 267 SSNFKDFLKKCLEKNVDARWTTSQLLQHPF 296
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 135/279 (48%), Gaps = 28/279 (10%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE-RGQKIDEHVQREIMNHRSLKHPNIVR 62
+EI+ ++G G FG ++K T L A K I+ + ++ E EI S HPNIV+
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVK 98
Query: 63 FKEVLLTPTHLAIVMEYAAGGELFERICNAGR-FSEDEARFFFQQLISGVSYCHSMQICH 121
+ +L I++E+ AGG + + R +E + + +Q + ++Y H +I H
Sbjct: 99 LLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIH 158
Query: 122 RDLKLENTL--LDGSTAPRVKICDFGYSKSSVLHSQPK-STVGTPAYIAPEVL---TKKE 175
RDLK N L LDG +K+ DFG S + Q + S +GTP ++APEV+ T K+
Sbjct: 159 RDLKAGNILFTLDGD----IKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKD 214
Query: 176 --YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYV----RV 229
YD K ADVWS G+TL M + E P + + +L + S P + R
Sbjct: 215 RPYDYK-ADVWSLGITLIEM-------AEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW 266
Query: 230 SLECKHLLSRIFVANSEKRITIPEIKNHPWFL--RNLPI 266
S K L + N + R T ++ HP+ N PI
Sbjct: 267 SSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKPI 305
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 129/257 (50%), Gaps = 17/257 (6%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIE-RGQKIDEHVQREIMNHRSLKHPNIVRFKEVLL 68
IG G+ G+ + +K T + +AVK ++ R Q+ E + E++ R H N+V L
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 69 TPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLEN 128
L +VME+ GG L + I R +E++ ++ +SY H+ + HRD+K ++
Sbjct: 113 VGDELWVVMEFLEGGALTD-IVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDS 171
Query: 129 TLLDGSTAPRVKICDFGY-SKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKIADVWSCG 187
LL ++ R+K+ DFG+ ++ S + K VGTP ++APEV+++ Y G D+WS G
Sbjct: 172 ILL--TSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPY-GTEVDIWSLG 228
Query: 188 VTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFP----DYVRVSLECKHLLSRIFVA 243
+ + M+ G P+ + + R+ + S P D +VS + L + V
Sbjct: 229 IMVIEMIDGEPPYFNEPPLQAMRR-------IRDSLPPRVKDLHKVSSVLRGFLDLMLVR 281
Query: 244 NSEKRITIPEIKNHPWF 260
+R T E+ HP+
Sbjct: 282 EPSQRATAQELLGHPFL 298
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 131/270 (48%), Gaps = 26/270 (9%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE-RGQKIDEHVQREIMNHRSLKHPNIVR 62
+EI+ ++G G FG ++K T L A K I+ + ++ E EI S HPNIV+
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVK 98
Query: 63 FKEVLLTPTHLAIVMEYAAGGELFERICNAGR-FSEDEARFFFQQLISGVSYCHSMQICH 121
+ +L I++E+ AGG + + R +E + + +Q + ++Y H +I H
Sbjct: 99 LLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIH 158
Query: 122 RDLKLENTL--LDGSTAPRVKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVL---TKKE 175
RDLK N L LDG +K+ DFG S + Q + +GTP ++APEV+ T K+
Sbjct: 159 RDLKAGNILFTLDGD----IKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKD 214
Query: 176 --YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYV----RV 229
YD K ADVWS G+TL M + E P + + +L + S P + R
Sbjct: 215 RPYDYK-ADVWSLGITLIEM-------AEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW 266
Query: 230 SLECKHLLSRIFVANSEKRITIPEIKNHPW 259
S K L + N + R T ++ HP+
Sbjct: 267 SSNFKDFLKKCLEKNVDARWTTSQLLQHPF 296
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 136/290 (46%), Gaps = 34/290 (11%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE---RGQKIDEHVQREIMNHRSLKH 57
ME ++ V+ IG G +GV R+K T E++A+K I + + REI + L H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE---ARFFFQQLISGVSYC 114
PNIV+ +V+ T L +V E+ + ++ +A + + + QL+ G+++C
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLSMD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLTK 173
HS ++ HRDLK EN L++ A +K+ DFG +++ V V T Y APE+L
Sbjct: 123 HSHRVLHRDLKPENLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 180
Query: 174 KEYDGKIADVWSCGVTLYVMLVGAYPFE-DPEDPKNFR--KTIGRILSVHY--------- 221
+Y D+WS G M+ F D E + FR +T+G V +
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 240
Query: 222 --SFPDYVRVSL---------ECKHLLSRIFVANSEKRITIPEIKNHPWF 260
SFP + R + + LLS++ + KRI+ HP+F
Sbjct: 241 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 136/290 (46%), Gaps = 34/290 (11%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE---RGQKIDEHVQREIMNHRSLKH 57
ME ++ V+ IG G +GV R+K T E++A+K I + + REI + L H
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE---ARFFFQQLISGVSYC 114
PNIV+ +V+ T L +V E+ + ++ +A + + + QL+ G+++C
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLSMD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLTK 173
HS ++ HRDLK EN L++ A +K+ DFG +++ V V T Y APE+L
Sbjct: 121 HSHRVLHRDLKPENLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 178
Query: 174 KEYDGKIADVWSCGVTLYVMLVGAYPFE-DPEDPKNFR--KTIGRILSVHY--------- 221
+Y D+WS G M+ F D E + FR +T+G V +
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 238
Query: 222 --SFPDYVRVSL---------ECKHLLSRIFVANSEKRITIPEIKNHPWF 260
SFP + R + + LLS++ + KRI+ HP+F
Sbjct: 239 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 127/286 (44%), Gaps = 31/286 (10%)
Query: 4 YEIVKDI-GSGNFGVAKLVRDKWTRELLAVKFIERGQ-KIDEHVQREI-MNHRSLKHPNI 60
Y++ +D+ G G + + T + AVK IE+ I V RE+ M ++ H N+
Sbjct: 14 YQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNV 73
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQIC 120
+ E +V E GG + I F+E EA Q + S + + H+ I
Sbjct: 74 LELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIA 133
Query: 121 HRDLKLENTLLD--GSTAPRVKICDFGYSKSSVLHSQ--PKST------VGTPAYIAPEV 170
HRDLK EN L + +P VKICDFG L+ P ST G+ Y+APEV
Sbjct: 134 HRDLKPENILCEHPNQVSP-VKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEV 192
Query: 171 LTKKEYDGKI----ADVWSCGVTLYVMLVGAYPF-----------EDPEDPKNFRKTIGR 215
+ + I D+WS GV LY++L G PF P
Sbjct: 193 VEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFES 252
Query: 216 ILSVHYSFP--DYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPW 259
I Y FP D+ +S K L+S++ V ++++R++ ++ HPW
Sbjct: 253 IQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPW 298
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 136/290 (46%), Gaps = 34/290 (11%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE---RGQKIDEHVQREIMNHRSLKH 57
ME ++ V+ IG G +GV R+K T E++A+K I + + REI + L H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE---ARFFFQQLISGVSYC 114
PNIV+ +V+ T L +V E+ + ++ +A + + + QL+ G+++C
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLTK 173
HS ++ HRDLK +N L++ A +K+ DFG +++ V V T Y APE+L
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 177
Query: 174 KEYDGKIADVWSCGVTLYVMLVGAYPFE-DPEDPKNFR--KTIGRILSVHY--------- 221
+Y D+WS G M+ F D E + FR +T+G V +
Sbjct: 178 XKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 222 --SFPDYVRVSL---------ECKHLLSRIFVANSEKRITIPEIKNHPWF 260
SFP + R + + LLS++ + KRI+ HP+F
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 136/290 (46%), Gaps = 34/290 (11%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE---RGQKIDEHVQREIMNHRSLKH 57
ME ++ V+ IG G +GV R+K T E++A+K I + + REI + L H
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE---ARFFFQQLISGVSYC 114
PNIV+ +V+ T L +V E+ + ++ +A + + + QL+ G+++C
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLTK 173
HS ++ HRDLK EN L++ A +K+ DFG +++ V V T Y APE+L
Sbjct: 122 HSHRVLHRDLKPENLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 179
Query: 174 KEYDGKIADVWSCGVTLYVMLVGAYPFE-DPEDPKNFR--KTIGRILSVHY--------- 221
+Y D+WS G M+ F D E + FR +T+G V +
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 239
Query: 222 --SFPDYVRVSL---------ECKHLLSRIFVANSEKRITIPEIKNHPWF 260
SFP + R + + LLS++ + KRI+ HP+F
Sbjct: 240 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 289
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 136/290 (46%), Gaps = 34/290 (11%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE---RGQKIDEHVQREIMNHRSLKH 57
ME ++ V+ IG G +GV R+K T E++A+K I + + REI + L H
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE---ARFFFQQLISGVSYC 114
PNIV+ +V+ T L +V E+ + ++ +A + + + QL+ G+++C
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLTK 173
HS ++ HRDLK EN L++ A +K+ DFG +++ V V T Y APE+L
Sbjct: 121 HSHRVLHRDLKPENLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 178
Query: 174 KEYDGKIADVWSCGVTLYVMLVGAYPFE-DPEDPKNFR--KTIGRILSVHY--------- 221
+Y D+WS G M+ F D E + FR +T+G V +
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 238
Query: 222 --SFPDYVRVSL---------ECKHLLSRIFVANSEKRITIPEIKNHPWF 260
SFP + R + + LLS++ + KRI+ HP+F
Sbjct: 239 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 136/290 (46%), Gaps = 34/290 (11%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE---RGQKIDEHVQREIMNHRSLKH 57
ME ++ V+ IG G +GV R+K T E++A+K I + + REI + L H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE---ARFFFQQLISGVSYC 114
PNIV+ +V+ T L +V E+ + ++ +A + + + QL+ G+S+C
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFC 119
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLTK 173
HS ++ HRDLK +N L++ A +K+ DFG +++ V V T Y APE+L
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 177
Query: 174 KEYDGKIADVWSCGVTLYVMLVGAYPFE-DPEDPKNFR--KTIGRILSVHY--------- 221
+Y D+WS G M+ F D E + FR +T+G V +
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 222 --SFPDYVRVSL---------ECKHLLSRIFVANSEKRITIPEIKNHPWF 260
SFP + R + + LLS++ + KRI+ HP+F
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 136/290 (46%), Gaps = 34/290 (11%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE---RGQKIDEHVQREIMNHRSLKH 57
ME ++ V+ IG G +GV R+K T E++A+K I + + REI + L H
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE---ARFFFQQLISGVSYC 114
PNIV+ +V+ T L +V E+ + ++ +A + + + QL+ G+++C
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLTK 173
HS ++ HRDLK +N L++ A +K+ DFG +++ V V T Y APE+L
Sbjct: 127 HSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 184
Query: 174 KEYDGKIADVWSCGVTLYVMLVGAYPFE-DPEDPKNFR--KTIGRILSVHY--------- 221
+Y D+WS G M+ F D E + FR +T+G V +
Sbjct: 185 XKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 244
Query: 222 --SFPDYVRVSL---------ECKHLLSRIFVANSEKRITIPEIKNHPWF 260
SFP + R + + LLS++ + KRI+ HP+F
Sbjct: 245 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 294
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 136/290 (46%), Gaps = 34/290 (11%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE---RGQKIDEHVQREIMNHRSLKH 57
ME ++ V+ IG G +GV R+K T E++A+K I + + REI + L H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE---ARFFFQQLISGVSYC 114
PNIV+ +V+ T L +V E+ + ++ +A + + + QL+ G+++C
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEHV--DQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLTK 173
HS ++ HRDLK +N L++ A +K+ DFG +++ V V T Y APE+L
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 180
Query: 174 KEYDGKIADVWSCGVTLYVMLVGAYPFE-DPEDPKNFR--KTIGRILSVHY--------- 221
+Y D+WS G M+ F D E + FR +T+G V +
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 240
Query: 222 --SFPDYVRVSL---------ECKHLLSRIFVANSEKRITIPEIKNHPWF 260
SFP + R + + LLS++ + KRI+ HP+F
Sbjct: 241 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 136/290 (46%), Gaps = 34/290 (11%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE---RGQKIDEHVQREIMNHRSLKH 57
ME ++ V+ IG G +GV R+K T E++A+K I + + REI + L H
Sbjct: 6 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 65
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE---ARFFFQQLISGVSYC 114
PNIV+ +V+ T L +V E+ + ++ +A + + + QL+ G+++C
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 123
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLTK 173
HS ++ HRDLK +N L++ A +K+ DFG +++ V V T Y APE+L
Sbjct: 124 HSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 181
Query: 174 KEYDGKIADVWSCGVTLYVMLVGAYPFE-DPEDPKNFR--KTIGRILSVHY--------- 221
+Y D+WS G M+ F D E + FR +T+G V +
Sbjct: 182 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 241
Query: 222 --SFPDYVRVSL---------ECKHLLSRIFVANSEKRITIPEIKNHPWF 260
SFP + R + + LLS++ + KRI+ HP+F
Sbjct: 242 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 291
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 136/290 (46%), Gaps = 34/290 (11%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE---RGQKIDEHVQREIMNHRSLKH 57
ME ++ V+ IG G +GV R+K T E++A+K I + + REI + L H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE---ARFFFQQLISGVSYC 114
PNIV+ +V+ T L +V E+ + ++ +A + + + QL+ G+++C
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLTK 173
HS ++ HRDLK +N L++ A +K+ DFG +++ V V T Y APE+L
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 180
Query: 174 KEYDGKIADVWSCGVTLYVMLVGAYPFE-DPEDPKNFR--KTIGRILSVHY--------- 221
+Y D+WS G M+ F D E + FR +T+G V +
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 240
Query: 222 --SFPDYVRVSL---------ECKHLLSRIFVANSEKRITIPEIKNHPWF 260
SFP + R + + LLS++ + KRI+ HP+F
Sbjct: 241 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 136/290 (46%), Gaps = 34/290 (11%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE---RGQKIDEHVQREIMNHRSLKH 57
ME ++ V+ IG G +GV R+K T E++A+K I + + REI + L H
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE---ARFFFQQLISGVSYC 114
PNIV+ +V+ T L +V E+ + ++ +A + + + QL+ G+++C
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLTK 173
HS ++ HRDLK +N L++ A +K+ DFG +++ V V T Y APE+L
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 178
Query: 174 KEYDGKIADVWSCGVTLYVMLVGAYPFE-DPEDPKNFR--KTIGRILSVHY--------- 221
+Y D+WS G M+ F D E + FR +T+G V +
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 238
Query: 222 --SFPDYVRVSL---------ECKHLLSRIFVANSEKRITIPEIKNHPWF 260
SFP + R + + LLS++ + KRI+ HP+F
Sbjct: 239 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 136/290 (46%), Gaps = 34/290 (11%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE---RGQKIDEHVQREIMNHRSLKH 57
ME ++ V+ IG G +GV R+K T E++A+K I + + REI + L H
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE---ARFFFQQLISGVSYC 114
PNIV+ +V+ T L +V E+ + ++ +A + + + QL+ G+++C
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLTK 173
HS ++ HRDLK +N L++ A +K+ DFG +++ V V T Y APE+L
Sbjct: 127 HSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 184
Query: 174 KEYDGKIADVWSCGVTLYVMLVGAYPFE-DPEDPKNFR--KTIGRILSVHY--------- 221
+Y D+WS G M+ F D E + FR +T+G V +
Sbjct: 185 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 244
Query: 222 --SFPDYVRVSL---------ECKHLLSRIFVANSEKRITIPEIKNHPWF 260
SFP + R + + LLS++ + KRI+ HP+F
Sbjct: 245 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 294
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 136/290 (46%), Gaps = 34/290 (11%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE---RGQKIDEHVQREIMNHRSLKH 57
ME ++ V+ IG G +GV R+K T E++A+K I + + REI + L H
Sbjct: 6 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 65
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE---ARFFFQQLISGVSYC 114
PNIV+ +V+ T L +V E+ + ++ +A + + + QL+ G+++C
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 123
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLTK 173
HS ++ HRDLK +N L++ A +K+ DFG +++ V V T Y APE+L
Sbjct: 124 HSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 181
Query: 174 KEYDGKIADVWSCGVTLYVMLVGAYPFE-DPEDPKNFR--KTIGRILSVHY--------- 221
+Y D+WS G M+ F D E + FR +T+G V +
Sbjct: 182 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 241
Query: 222 --SFPDYVRVSL---------ECKHLLSRIFVANSEKRITIPEIKNHPWF 260
SFP + R + + LLS++ + KRI+ HP+F
Sbjct: 242 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 291
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 136/290 (46%), Gaps = 34/290 (11%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE---RGQKIDEHVQREIMNHRSLKH 57
ME ++ V+ IG G +GV R+K T E++A+K I + + REI + L H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE---ARFFFQQLISGVSYC 114
PNIV+ +V+ T L +V E+ + ++ +A + + + QL+ G+++C
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLTK 173
HS ++ HRDLK +N L++ A +K+ DFG +++ V V T Y APE+L
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 176
Query: 174 KEYDGKIADVWSCGVTLYVMLVGAYPFE-DPEDPKNFR--KTIGRILSVHY--------- 221
+Y D+WS G M+ F D E + FR +T+G V +
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236
Query: 222 --SFPDYVRVSL---------ECKHLLSRIFVANSEKRITIPEIKNHPWF 260
SFP + R + + LLS++ + KRI+ HP+F
Sbjct: 237 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 136/290 (46%), Gaps = 34/290 (11%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE---RGQKIDEHVQREIMNHRSLKH 57
ME ++ V+ IG G +GV R+K T E++A+K I + + REI + L H
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE---ARFFFQQLISGVSYC 114
PNIV+ +V+ T L +V E+ + ++ +A + + + QL+ G+++C
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLTK 173
HS ++ HRDLK +N L++ A +K+ DFG +++ V V T Y APE+L
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 179
Query: 174 KEYDGKIADVWSCGVTLYVMLVGAYPFE-DPEDPKNFR--KTIGRILSVHY--------- 221
+Y D+WS G M+ F D E + FR +T+G V +
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 239
Query: 222 --SFPDYVRVSL---------ECKHLLSRIFVANSEKRITIPEIKNHPWF 260
SFP + R + + LLS++ + KRI+ HP+F
Sbjct: 240 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 289
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 136/290 (46%), Gaps = 34/290 (11%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE---RGQKIDEHVQREIMNHRSLKH 57
ME ++ V+ IG G +GV R+K T E++A+K I + + REI + L H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE---ARFFFQQLISGVSYC 114
PNIV+ +V+ T L +V E+ + ++ +A + + + QL+ G+++C
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLTK 173
HS ++ HRDLK +N L++ A +K+ DFG +++ V V T Y APE+L
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 177
Query: 174 KEYDGKIADVWSCGVTLYVMLVGAYPFE-DPEDPKNFR--KTIGRILSVHY--------- 221
+Y D+WS G M+ F D E + FR +T+G V +
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 222 --SFPDYVRVSL---------ECKHLLSRIFVANSEKRITIPEIKNHPWF 260
SFP + R + + LLS++ + KRI+ HP+F
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 136/290 (46%), Gaps = 34/290 (11%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE---RGQKIDEHVQREIMNHRSLKH 57
ME ++ V+ IG G +GV R+K T E++A+K I + + REI + L H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE---ARFFFQQLISGVSYC 114
PNIV+ +V+ T L +V E+ + ++ +A + + + QL+ G+++C
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLTK 173
HS ++ HRDLK +N L++ A +K+ DFG +++ V V T Y APE+L
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 180
Query: 174 KEYDGKIADVWSCGVTLYVMLVGAYPFE-DPEDPKNFR--KTIGRILSVHY--------- 221
+Y D+WS G M+ F D E + FR +T+G V +
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 240
Query: 222 --SFPDYVRVSL---------ECKHLLSRIFVANSEKRITIPEIKNHPWF 260
SFP + R + + LLS++ + KRI+ HP+F
Sbjct: 241 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 136/290 (46%), Gaps = 34/290 (11%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE---RGQKIDEHVQREIMNHRSLKH 57
ME ++ V+ IG G +GV R+K T E++A+K I + + REI + L H
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE---ARFFFQQLISGVSYC 114
PNIV+ +V+ T L +V E+ + ++ +A + + + QL+ G+++C
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLTK 173
HS ++ HRDLK +N L++ A +K+ DFG +++ V V T Y APE+L
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 179
Query: 174 KEYDGKIADVWSCGVTLYVMLVGAYPFE-DPEDPKNFR--KTIGRILSVHY--------- 221
+Y D+WS G M+ F D E + FR +T+G V +
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 239
Query: 222 --SFPDYVRVSL---------ECKHLLSRIFVANSEKRITIPEIKNHPWF 260
SFP + R + + LLS++ + KRI+ HP+F
Sbjct: 240 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 289
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 136/290 (46%), Gaps = 34/290 (11%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE---RGQKIDEHVQREIMNHRSLKH 57
ME ++ V+ IG G +GV R+K T E++A+K I + + REI + L H
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE---ARFFFQQLISGVSYC 114
PNIV+ +V+ T L +V E+ + ++ +A + + + QL+ G+++C
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLTK 173
HS ++ HRDLK +N L++ A +K+ DFG +++ V V T Y APE+L
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 178
Query: 174 KEYDGKIADVWSCGVTLYVMLVGAYPFE-DPEDPKNFR--KTIGRILSVHY--------- 221
+Y D+WS G M+ F D E + FR +T+G V +
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 238
Query: 222 --SFPDYVRVSL---------ECKHLLSRIFVANSEKRITIPEIKNHPWF 260
SFP + R + + LLS++ + KRI+ HP+F
Sbjct: 239 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 136/290 (46%), Gaps = 34/290 (11%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE---RGQKIDEHVQREIMNHRSLKH 57
ME ++ V+ IG G +GV R+K T E++A+K I + + REI + L H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE---ARFFFQQLISGVSYC 114
PNIV+ +V+ T L +V E+ + ++ +A + + + QL+ G+++C
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLTK 173
HS ++ HRDLK +N L++ A +K+ DFG +++ V V T Y APE+L
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 177
Query: 174 KEYDGKIADVWSCGVTLYVMLVGAYPFE-DPEDPKNFR--KTIGRILSVHY--------- 221
+Y D+WS G M+ F D E + FR +T+G V +
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 222 --SFPDYVRVSL---------ECKHLLSRIFVANSEKRITIPEIKNHPWF 260
SFP + R + + LLS++ + KRI+ HP+F
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 136/290 (46%), Gaps = 34/290 (11%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE---RGQKIDEHVQREIMNHRSLKH 57
ME ++ V+ IG G +GV R+K T E++A+K I + + REI + L H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE---ARFFFQQLISGVSYC 114
PNIV+ +V+ T L +V E+ + ++ +A + + + QL+ G+++C
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLTK 173
HS ++ HRDLK +N L++ A +K+ DFG +++ V V T Y APE+L
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 177
Query: 174 KEYDGKIADVWSCGVTLYVMLVGAYPFE-DPEDPKNFR--KTIGRILSVHY--------- 221
+Y D+WS G M+ F D E + FR +T+G V +
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 222 --SFPDYVRVSL---------ECKHLLSRIFVANSEKRITIPEIKNHPWF 260
SFP + R + + LLS++ + KRI+ HP+F
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 136/290 (46%), Gaps = 34/290 (11%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE---RGQKIDEHVQREIMNHRSLKH 57
ME ++ V+ IG G +GV R+K T E++A+K I + + REI + L H
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE---ARFFFQQLISGVSYC 114
PNIV+ +V+ T L +V E+ + ++ +A + + + QL+ G+++C
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLTK 173
HS ++ HRDLK +N L++ A +K+ DFG +++ V V T Y APE+L
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 178
Query: 174 KEYDGKIADVWSCGVTLYVMLVGAYPFE-DPEDPKNFR--KTIGRILSVHY--------- 221
+Y D+WS G M+ F D E + FR +T+G V +
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 238
Query: 222 --SFPDYVRVSL---------ECKHLLSRIFVANSEKRITIPEIKNHPWF 260
SFP + R + + LLS++ + KRI+ HP+F
Sbjct: 239 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 136/290 (46%), Gaps = 34/290 (11%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE---RGQKIDEHVQREIMNHRSLKH 57
ME ++ V+ IG G +GV R+K T E++A+K I + + REI + L H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE---ARFFFQQLISGVSYC 114
PNIV+ +V+ T L +V E+ + ++ +A + + + QL+ G+++C
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLTK 173
HS ++ HRDLK +N L++ A +K+ DFG +++ V V T Y APE+L
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 177
Query: 174 KEYDGKIADVWSCGVTLYVMLVGAYPFE-DPEDPKNFR--KTIGRILSVHY--------- 221
+Y D+WS G M+ F D E + FR +T+G V +
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 222 --SFPDYVRVSL---------ECKHLLSRIFVANSEKRITIPEIKNHPWF 260
SFP + R + + LLS++ + KRI+ HP+F
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 136/290 (46%), Gaps = 34/290 (11%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE---RGQKIDEHVQREIMNHRSLKH 57
ME ++ V+ IG G +GV R+K T E++A+K I + + REI + L H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE---ARFFFQQLISGVSYC 114
PNIV+ +V+ T L +V E+ + ++ +A + + + QL+ G+++C
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLTK 173
HS ++ HRDLK +N L++ A +K+ DFG +++ V V T Y APE+L
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 177
Query: 174 KEYDGKIADVWSCGVTLYVMLVGAYPFE-DPEDPKNFR--KTIGRILSVHY--------- 221
+Y D+WS G M+ F D E + FR +T+G V +
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 222 --SFPDYVRVSL---------ECKHLLSRIFVANSEKRITIPEIKNHPWF 260
SFP + R + + LLS++ + KRI+ HP+F
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 136/290 (46%), Gaps = 34/290 (11%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE---RGQKIDEHVQREIMNHRSLKH 57
ME ++ V+ IG G +GV R+K T E++A+K I + + REI + L H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE---ARFFFQQLISGVSYC 114
PNIV+ +V+ T L +V E+ + ++ +A + + + QL+ G+++C
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLTK 173
HS ++ HRDLK +N L++ A +K+ DFG +++ V V T Y APE+L
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 176
Query: 174 KEYDGKIADVWSCGVTLYVMLVGAYPFE-DPEDPKNFR--KTIGRILSVHY--------- 221
+Y D+WS G M+ F D E + FR +T+G V +
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236
Query: 222 --SFPDYVRVSL---------ECKHLLSRIFVANSEKRITIPEIKNHPWF 260
SFP + R + + LLS++ + KRI+ HP+F
Sbjct: 237 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 136/290 (46%), Gaps = 34/290 (11%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE---RGQKIDEHVQREIMNHRSLKH 57
ME ++ V+ IG G +GV R+K T E++A+K I + + REI + L H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE---ARFFFQQLISGVSYC 114
PNIV+ +V+ T L +V E+ + ++ +A + + + QL+ G+++C
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLTK 173
HS ++ HRDLK +N L++ A +K+ DFG +++ V V T Y APE+L
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 177
Query: 174 KEYDGKIADVWSCGVTLYVMLVGAYPFE-DPEDPKNFR--KTIGRILSVHY--------- 221
+Y D+WS G M+ F D E + FR +T+G V +
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 222 --SFPDYVRVSL---------ECKHLLSRIFVANSEKRITIPEIKNHPWF 260
SFP + R + + LLS++ + KRI+ HP+F
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 136/290 (46%), Gaps = 34/290 (11%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE---RGQKIDEHVQREIMNHRSLKH 57
ME ++ V+ IG G +GV R+K T E++A+K I + + REI + L H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE---ARFFFQQLISGVSYC 114
PNIV+ +V+ T L +V E+ + ++ +A + + + QL+ G+++C
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLTK 173
HS ++ HRDLK +N L++ A +K+ DFG +++ V V T Y APE+L
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 176
Query: 174 KEYDGKIADVWSCGVTLYVMLVGAYPFE-DPEDPKNFR--KTIGRILSVHY--------- 221
+Y D+WS G M+ F D E + FR +T+G V +
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236
Query: 222 --SFPDYVRVSL---------ECKHLLSRIFVANSEKRITIPEIKNHPWF 260
SFP + R + + LLS++ + KRI+ HP+F
Sbjct: 237 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 135/290 (46%), Gaps = 34/290 (11%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE---RGQKIDEHVQREIMNHRSLKH 57
ME ++ V+ IG G +GV R+K T E++A+K I + + REI + L H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE---ARFFFQQLISGVSYC 114
PNIV+ +V+ T L +V E+ + + +A + + + QL+ G+++C
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLSMD--LKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLTK 173
HS ++ HRDLK +N L++ A +K+ DFG +++ V V T Y APE+L
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 180
Query: 174 KEYDGKIADVWSCGVTLYVMLVGAYPFE-DPEDPKNFR--KTIGRILSVHY--------- 221
+Y D+WS G M+ F D E + FR +T+G V +
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 240
Query: 222 --SFPDYVRVSL---------ECKHLLSRIFVANSEKRITIPEIKNHPWF 260
SFP + R + + LLS++ + KRI+ HP+F
Sbjct: 241 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 135/290 (46%), Gaps = 34/290 (11%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE---RGQKIDEHVQREIMNHRSLKH 57
ME ++ V+ IG G +GV R+K T E++A+K I + + REI + L H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE---ARFFFQQLISGVSYC 114
PNIV+ +V+ T L +V E+ + + +A + + + QL+ G+++C
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLH--QDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLTK 173
HS ++ HRDLK EN L++ A +K+ DFG +++ V V T Y APE+L
Sbjct: 120 HSHRVLHRDLKPENLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 177
Query: 174 KEYDGKIADVWSCGVTLYVMLVGAYPFE-DPEDPKNFR--KTIGRILSVHY--------- 221
+Y D+WS G M+ F D E + FR +T+G V +
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 222 --SFPDYVRVSL---------ECKHLLSRIFVANSEKRITIPEIKNHPWF 260
SFP + R + + LLS++ + KRI+ HP+F
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 132/288 (45%), Gaps = 30/288 (10%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE---RGQKIDEHVQREIMNHRSLKH 57
ME ++ V+ IG G +GV R+K T E++A+K I + + REI + L H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGG-ELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
PNIV+ +V+ T L +V E+ + F + + QL+ G+++CHS
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLTKKE 175
++ HRDLK +N L++ A +K+ DFG +++ V V T Y APE+L +
Sbjct: 125 HRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 176 YDGKIADVWSCGVTLYVMLVGAYPFE-DPEDPKNFR--KTIGRILSVHY----------- 221
Y D+WS G M+ F D E + FR +T+G V +
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 222 SFPDYVRVSL---------ECKHLLSRIFVANSEKRITIPEIKNHPWF 260
SFP + R + + LLS++ + KRI+ HP+F
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 135/290 (46%), Gaps = 34/290 (11%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE---RGQKIDEHVQREIMNHRSLKH 57
ME ++ V+ IG G +GV R+K T E++A+K I + + REI + L H
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE---ARFFFQQLISGVSYC 114
PNIV+ +V+ T L +V E+ + + +A + + + QL+ G+++C
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLSMD--LKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLTK 173
HS ++ HRDLK +N L++ A +K+ DFG +++ V V T Y APE+L
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 179
Query: 174 KEYDGKIADVWSCGVTLYVMLVGAYPFE-DPEDPKNFR--KTIGRILSVHY--------- 221
+Y D+WS G M+ F D E + FR +T+G V +
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 239
Query: 222 --SFPDYVRVSL---------ECKHLLSRIFVANSEKRITIPEIKNHPWF 260
SFP + R + + LLS++ + KRI+ HP+F
Sbjct: 240 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 289
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 112/207 (54%), Gaps = 20/207 (9%)
Query: 6 IVKDIGSGNFGVAKLVRDKWTRELLAVKFIER----GQKIDEHVQREIMNHRSLKHPNIV 61
I + IG+G+FG R +W +AVK + ++++E + RE+ + L+HPNIV
Sbjct: 41 IKEKIGAGSFGTVH--RAEWHGSDVAVKILMEQDFHAERVNEFL-REVAIMKRLRHPNIV 97
Query: 62 RFKEVLLTPTHLAIVMEYAAGGELFERICNAG-RFSEDEARFFFQ--QLISGVSYCHSMQ 118
F + P +L+IV EY + G L+ + +G R DE R + G++Y H+
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN 157
Query: 119 --ICHRDLKLENTLLDGSTAPRVKICDFGYSK---SSVLHSQPKSTVGTPAYIAPEVLTK 173
I HR+LK N L+D VK+CDFG S+ S+ L S KS GTP ++APEVL +
Sbjct: 158 PPIVHRNLKSPNLLVDKKYT--VKVCDFGLSRLKASTFLSS--KSAAGTPEWMAPEVL-R 212
Query: 174 KEYDGKIADVWSCGVTLYVMLVGAYPF 200
E + +DV+S GV L+ + P+
Sbjct: 213 DEPSNEKSDVYSFGVILWELATLQQPW 239
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 132/288 (45%), Gaps = 30/288 (10%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE---RGQKIDEHVQREIMNHRSLKH 57
ME ++ V+ IG G +GV R+K T E++A+K I + + REI + L H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGG-ELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
PNIV+ +V+ T L +V E+ + F + + QL+ G+++CHS
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLTKKE 175
++ HRDLK +N L++ A +K+ DFG +++ V V T Y APE+L +
Sbjct: 121 HRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 176 YDGKIADVWSCGVTLYVMLVGAYPFE-DPEDPKNFR--KTIGRILSVHY----------- 221
Y D+WS G M+ F D E + FR +T+G V +
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 222 SFPDYVRVSL---------ECKHLLSRIFVANSEKRITIPEIKNHPWF 260
SFP + R + + LLS++ + KRI+ HP+F
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 126/286 (44%), Gaps = 31/286 (10%)
Query: 4 YEIVKDI-GSGNFGVAKLVRDKWTRELLAVKFIERGQ-KIDEHVQREI-MNHRSLKHPNI 60
Y++ +D+ G G + + T + AVK IE+ I V RE+ M ++ H N+
Sbjct: 14 YQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNV 73
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQIC 120
+ E +V E GG + I F+E EA Q + S + + H+ I
Sbjct: 74 LELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIA 133
Query: 121 HRDLKLENTLLD--GSTAPRVKICDFGYSKSSVLHSQ--PKST------VGTPAYIAPEV 170
HRDLK EN L + +P VKICDF L+ P ST G+ Y+APEV
Sbjct: 134 HRDLKPENILCEHPNQVSP-VKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEV 192
Query: 171 LTKKEYDGKI----ADVWSCGVTLYVMLVGAYPF-----------EDPEDPKNFRKTIGR 215
+ + I D+WS GV LY++L G PF P
Sbjct: 193 VEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFES 252
Query: 216 ILSVHYSFP--DYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPW 259
I Y FP D+ +S K L+S++ V ++++R++ ++ HPW
Sbjct: 253 IQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPW 298
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 135/275 (49%), Gaps = 32/275 (11%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIV 61
E +++++ +G G++G K T +++A+K + + E + +EI + P++V
Sbjct: 29 EVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEII-KEISIMQQCDSPHVV 87
Query: 62 RFKEVLLTPTHLAIVMEYAAGGELFERI-CNAGRFSEDEARFFFQQLISGVSYCHSMQIC 120
++ T L IVMEY G + + I +EDE Q + G+ Y H M+
Sbjct: 88 KYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKI 147
Query: 121 HRDLKLENTLLDGSTAPRVKICDFGYS-KSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGK 179
HRD+K N LL+ T K+ DFG + + + ++ +GTP ++APEV+ + Y+
Sbjct: 148 HRDIKAGNILLN--TEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNC- 204
Query: 180 IADVWSCGVTLYVMLVGAYPFED----------PED-PKNFRKTIGRILSVHYSFPDYVR 228
+AD+WS G+T M G P+ D P + P FRK + S +F D+V+
Sbjct: 205 VADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKP--ELWS--DNFTDFVK 260
Query: 229 VSLECKHLLSRIFVANSEKRITIPEIKNHPWFLRN 263
+C V + E+R T ++ HP F+R+
Sbjct: 261 ---QC-------LVKSPEQRATATQLLQHP-FVRS 284
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 131/290 (45%), Gaps = 34/290 (11%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQ----REIMNHRSLK 56
M++YE ++ IG G +G +++ T E++A+K + R DE V REI + LK
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRV-RLDDDDEGVPSSALREICLLKELK 59
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGG-ELFERICNAGRFSEDEARFFFQQLISGVSYCH 115
H NIVR +VL + L +V E+ + + CN G + + F QL+ G+ +CH
Sbjct: 60 HKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCN-GDLDPEIVKSFLFQLLKGLGFCH 118
Query: 116 SMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLTKK 174
S + HRDLK +N L++ + +K+ DFG +++ + + S V T Y P+VL
Sbjct: 119 SRNVLHRDLKPQNLLINRNG--ELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGA 176
Query: 175 EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSV--------HYSFPDY 226
+ D+WS G + A P D + K I R+L PDY
Sbjct: 177 KLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDY 236
Query: 227 V----------------RVSLECKHLLSRIFVANSEKRITIPEIKNHPWF 260
+++ + LL + N +RI+ E HP+F
Sbjct: 237 KPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYF 286
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 110/207 (53%), Gaps = 20/207 (9%)
Query: 6 IVKDIGSGNFGVAKLVRDKWTRELLAVKFIER----GQKIDEHVQREIMNHRSLKHPNIV 61
I + IG+G+FG R +W +AVK + ++++E + RE+ + L+HPNIV
Sbjct: 41 IKEKIGAGSFGTVH--RAEWHGSDVAVKILMEQDFHAERVNEFL-REVAIMKRLRHPNIV 97
Query: 62 RFKEVLLTPTHLAIVMEYAAGGELFERICNAG-RFSEDEARFFFQ--QLISGVSYCHSMQ 118
F + P +L+IV EY + G L+ + +G R DE R + G++Y H+
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN 157
Query: 119 --ICHRDLKLENTLLDGSTAPRVKICDFGYSK---SSVLHSQPKSTVGTPAYIAPEVLTK 173
I HRDLK N L+D VK+CDFG S+ S L S K GTP ++APEVL +
Sbjct: 158 PPIVHRDLKSPNLLVDKKYT--VKVCDFGLSRLKASXFLXS--KXAAGTPEWMAPEVL-R 212
Query: 174 KEYDGKIADVWSCGVTLYVMLVGAYPF 200
E + +DV+S GV L+ + P+
Sbjct: 213 DEPSNEKSDVYSFGVILWELATLQQPW 239
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 135/290 (46%), Gaps = 34/290 (11%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLA---VKFIERGQKIDEHVQREIMNHRSLKH 57
ME ++ V+ IG G +GV R+K T E++A ++ + + REI + L H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE---ARFFFQQLISGVSYC 114
PNIV+ +V+ T L +V E+ + ++ +A + + + QL+ G+++C
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLTK 173
HS ++ HRDLK +N L++ A +K+ DFG +++ V V T Y APE+L
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 177
Query: 174 KEYDGKIADVWSCGVTLYVMLVGAYPFE-DPEDPKNFR--KTIGRILSVHY--------- 221
+Y D+WS G M+ F D E + FR +T+G V +
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 222 --SFPDYVRVSL---------ECKHLLSRIFVANSEKRITIPEIKNHPWF 260
SFP + R + + LLS++ + KRI+ HP+F
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 135/290 (46%), Gaps = 34/290 (11%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLA---VKFIERGQKIDEHVQREIMNHRSLKH 57
ME ++ V+ IG G +GV R+K T E++A ++ + + REI + L H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE---ARFFFQQLISGVSYC 114
PNIV+ +V+ T L +V E+ + ++ +A + + + QL+ G+++C
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLTK 173
HS ++ HRDLK +N L++ A +K+ DFG +++ V V T Y APE+L
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 176
Query: 174 KEYDGKIADVWSCGVTLYVMLVGAYPFE-DPEDPKNFR--KTIGRILSVHY--------- 221
+Y D+WS G M+ F D E + FR +T+G V +
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236
Query: 222 --SFPDYVRVSL---------ECKHLLSRIFVANSEKRITIPEIKNHPWF 260
SFP + R + + LLS++ + KRI+ HP+F
Sbjct: 237 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 118/263 (44%), Gaps = 28/263 (10%)
Query: 31 AVKFIER-GQKIDEHVQREIMN-HRSLKHPNIVRFKEVLLTPTHLAIVMEYAAGGELFER 88
AVK IE+ V RE+ ++ + NI+ E T +V E GG +
Sbjct: 42 AVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAH 101
Query: 89 ICNAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDG-STAPRVKICDFGYS 147
I F+E EA + + + + + H+ I HRDLK EN L + VKICDF
Sbjct: 102 IQKQKHFNEREASRVVRDVAAALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLG 161
Query: 148 KSSVLH------SQPKSTV--GTPAYIAPEVL----TKKEYDGKIADVWSCGVTLYVMLV 195
L+ + P+ T G+ Y+APEV+ + + K D+WS GV LY+ML
Sbjct: 162 SGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLS 221
Query: 196 GAYPFED--PEDPKNFRKTIGRILSV---------HYSFP--DYVRVSLECKHLLSRIFV 242
G PF D R + R+ Y FP D+ +S E K L+S++ V
Sbjct: 222 GYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISKLLV 281
Query: 243 ANSEKRITIPEIKNHPWFLRNLP 265
++++R++ ++ HPW P
Sbjct: 282 RDAKQRLSAAQVLQHPWVQGQAP 304
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 135/289 (46%), Gaps = 34/289 (11%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE---RGQKIDEHVQREIMNHRSLKHP 58
E ++ V+ IG G +GV R+K T E++A+K I + + REI + L HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE---ARFFFQQLISGVSYCH 115
NIV+ +V+ T L +V E+ + ++ +A + + + QL+ G+++CH
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 116 SMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLTKK 174
S ++ HRDLK +N L++ A +K+ DFG +++ V V T Y APE+L
Sbjct: 120 SHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 177
Query: 175 EYDGKIADVWSCGVTLYVMLVGAYPFE-DPEDPKNFR--KTIGRILSVHY---------- 221
+Y D+WS G M+ F D E + FR +T+G V +
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 237
Query: 222 -SFPDYVRVSL---------ECKHLLSRIFVANSEKRITIPEIKNHPWF 260
SFP + R + + LLS++ + KRI+ HP+F
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 131/265 (49%), Gaps = 12/265 (4%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEH----VQREIMNHRSLKH 57
+ +EI++ IG G+FG +V+ T+++ A+K++ + + ++ + V +E+ + L+H
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSM 117
P +V + +V++ GG+L + F E+ + F +L+ + Y +
Sbjct: 75 PFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQ 134
Query: 118 QICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYD 177
+I HRD+K +N LLD V I DF + +Q + GT Y+APE+ + ++
Sbjct: 135 RIIHRDMKPDNILLDEHG--HVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGA 192
Query: 178 GK--IADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKH 235
G D WS GVT Y +L G P+ + ++ + + ++P S E
Sbjct: 193 GYSFAVDWWSLGVTAYELLRGRRPYH-IRSSTSSKEIVHTFETTVVTYPS--AWSQEMVS 249
Query: 236 LLSRIFVANSEKRIT-IPEIKNHPW 259
LL ++ N ++R + + +++N P+
Sbjct: 250 LLKKLLEPNPDQRFSQLSDVQNFPY 274
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 126/292 (43%), Gaps = 37/292 (12%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAV-KFIERGQK--IDEHVQREIMNHRSLKH 57
ME+YE + IG G++GV R++ T +++A+ KF+E I + REI + LKH
Sbjct: 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKH 61
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSM 117
PN+V EV L +V EY L E E + Q + V++CH
Sbjct: 62 PNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKH 121
Query: 118 QICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPK----STVGTPAYIAPEVLTK 173
HRD+K EN L+ + +K+CDFG+++ L + P V T Y +PE+L
Sbjct: 122 NCIHRDVKPENILITKHSV--IKLCDFGFAR---LLTGPSDYYDDEVATRWYRSPELLVG 176
Query: 174 KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNF---RKTIGRILSVHYS-------- 222
G DVW+ G +L G + D RKT+G ++ H
Sbjct: 177 DTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYF 236
Query: 223 ----FPD----------YVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWF 260
PD + +S LL + +R+T ++ +HP+F
Sbjct: 237 SGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYF 288
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 108/217 (49%), Gaps = 8/217 (3%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFI--ERGQKIDEHVQREIMNHRSLKHPN 59
+ +E + ++G+GN GV V+ + + ++A K I E I + RE+ P
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 75
Query: 60 IVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSM-Q 118
IV F + ++I ME+ GG L + + A R E+ ++ G++Y Q
Sbjct: 76 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQ 135
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDG 178
I HRD+K N L++ + +K+CDFG S ++ S S VGT +Y+APE L Y
Sbjct: 136 IMHRDVKPSNILVN--SRGEIKLCDFGVS-GQLIDSMANSFVGTRSYMAPERLQGTHYSV 192
Query: 179 KIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGR 215
+ +D+WS G++L + VG YP P D K GR
Sbjct: 193 Q-SDIWSMGLSLVELAVGRYPIP-PPDAKELEAIFGR 227
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 102/205 (49%), Gaps = 9/205 (4%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE--RGQKIDEHVQREIMNHRSLKHPN 59
E + + IG G+FG D T+E++A+K I+ + E +Q+EI P
Sbjct: 19 ELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 78
Query: 60 IVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQI 119
I R+ L T L I+MEY GG + + G E ++++ G+ Y HS +
Sbjct: 79 ITRYFGSYLKSTKLWIIMEYLGGGSALD-LLKPGPLEETYIATILREILKGLDYLHSERK 137
Query: 120 CHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLTKKEYD 177
HRD+K N LL S VK+ DFG + + +Q K VGTP ++APEV+ + YD
Sbjct: 138 IHRDIKAANVLL--SEQGDVKLADFGVA-GQLTDTQIKRNXFVGTPFWMAPEVIKQSAYD 194
Query: 178 GKIADVWSCGVTLYVMLVGAYPFED 202
K AD+WS G+T + G P D
Sbjct: 195 FK-ADIWSLGITAIELAKGEPPNSD 218
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 125/267 (46%), Gaps = 24/267 (8%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE--RGQKIDEHVQREIMNHRSLKHPN 59
E + ++ IG G+FG D T++++A+K I+ + E +Q+EI
Sbjct: 23 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSY 82
Query: 60 IVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQI 119
+ ++ L + L I+MEY GG + + AG F E + ++++ G+ Y HS +
Sbjct: 83 VTKYYGSYLKGSKLWIIMEYLGGGSALD-LLRAGPFDEFQIATMLKEILKGLDYLHSEKK 141
Query: 120 CHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLTKKEYDG 178
HRD+K N LL S VK+ DFG + ++T VGTP ++APEV+ + YD
Sbjct: 142 IHRDIKAANVLL--SEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDS 199
Query: 179 KIADVWSCGVTLYVMLVGAYPFEDPED-------PKNFRKTIGRILSVHYSFPDYVRVSL 231
K AD+WS G+T + G P D PKN T+ + SF +++ L
Sbjct: 200 K-ADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTL--VGDFTKSFKEFIDACL 256
Query: 232 E--------CKHLLSRIFVANSEKRIT 250
K LL F+ + K+ +
Sbjct: 257 NKDPSFRPTAKELLKHKFIVKNSKKTS 283
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 105/206 (50%), Gaps = 21/206 (10%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIERGQKID-----EHVQREIMNHRSLKHPNIVRFK 64
IG G FG K+ R W + +AVK D E+V++E LKHPNI+ +
Sbjct: 15 IGIGGFG--KVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALR 72
Query: 65 EVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS---MQICH 121
V L +L +VME+A GG L R+ + R D + Q+ G++Y H + I H
Sbjct: 73 GVCLKEPNLCLVMEFARGGPL-NRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIH 131
Query: 122 RDLKLENTLL-----DGSTAPRV-KICDFGYSKSSVLHSQPK-STVGTPAYIAPEVLTKK 174
RDLK N L+ +G + ++ KI DFG ++ H K S G A++APEV+
Sbjct: 132 RDLKSSNILILQKVENGDLSNKILKITDFGLARE--WHRTTKMSAAGAYAWMAPEVIRAS 189
Query: 175 EYDGKIADVWSCGVTLYVMLVGAYPF 200
+ K +DVWS GV L+ +L G PF
Sbjct: 190 MFS-KGSDVWSYGVLLWELLTGEVPF 214
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 123/272 (45%), Gaps = 26/272 (9%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE--RGQKIDEHVQREIMNHRSLKHPN 59
E + ++ IG G+FG D T++++A+K I+ + E +Q+EI P
Sbjct: 27 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 86
Query: 60 IVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQI 119
+ ++ L T L I+MEY GG + + G E + ++++ G+ Y HS +
Sbjct: 87 VTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKK 145
Query: 120 CHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLTKKEYDG 178
HRD+K N LL S VK+ DFG + ++T VGTP ++APEV+ + YD
Sbjct: 146 IHRDIKAANVLL--SEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDS 203
Query: 179 KIADVWSCGVTLYVMLVGAYPFEDPED-------PKNFRKTIGRILSVHYSFPDYVRVSL 231
K AD+WS G+T + G P + PKN T L +YS P
Sbjct: 204 K-ADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPT----LEGNYSKP------- 251
Query: 232 ECKHLLSRIFVANSEKRITIPEIKNHPWFLRN 263
K + R T E+ H + LRN
Sbjct: 252 -LKEFVEACLNKEPSFRPTAKELLKHKFILRN 282
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 104/206 (50%), Gaps = 7/206 (3%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFI--ERGQKIDEHVQREIMNHRSLKHPN 59
+ +E + ++G+GN GV V K + ++A K I E I + RE+ P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 60 IVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSM-Q 118
IV F + ++I ME+ GG L + + AGR E +I G++Y +
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 125
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDG 178
I HRD+K N L++ + +K+CDFG S ++ S S VGT +Y++PE L Y
Sbjct: 126 IMHRDVKPSNILVN--SRGEIKLCDFGVS-GQLIDSMANSFVGTRSYMSPERLQGTHYSV 182
Query: 179 KIADVWSCGVTLYVMLVGAYPFEDPE 204
+ +D+WS G++L M VG YP P+
Sbjct: 183 Q-SDIWSMGLSLVEMAVGRYPIPPPD 207
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 124/273 (45%), Gaps = 28/273 (10%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE--RGQKIDEHVQREIMNHRSLKHPN 59
E + ++ IG G+FG D T++++A+K I+ + E +Q+EI P
Sbjct: 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 81
Query: 60 IVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQI 119
+ ++ L T L I+MEY GG + + G E + ++++ G+ Y HS +
Sbjct: 82 VTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKK 140
Query: 120 CHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLTKKEYD 177
HRD+K N LL S VK+ DFG + + +Q K VGTP ++APEV+ + YD
Sbjct: 141 IHRDIKAANVLL--SEHGEVKLADFGVA-GQLTDTQIKRNXFVGTPFWMAPEVIKQSAYD 197
Query: 178 GKIADVWSCGVTLYVMLVGAYPFEDPED-------PKNFRKTIGRILSVHYSFPDYVRVS 230
K AD+WS G+T + G P + PKN T L +YS P
Sbjct: 198 SK-ADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPT----LEGNYSKP------ 246
Query: 231 LECKHLLSRIFVANSEKRITIPEIKNHPWFLRN 263
K + R T E+ H + LRN
Sbjct: 247 --LKEFVEACLNKEPSFRPTAKELLKHKFILRN 277
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 104/206 (50%), Gaps = 7/206 (3%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFI--ERGQKIDEHVQREIMNHRSLKHPN 59
+ +E + ++G+GN GV V K + ++A K I E I + RE+ P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 60 IVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSM-Q 118
IV F + ++I ME+ GG L + + AGR E +I G++Y +
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 125
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDG 178
I HRD+K N L++ + +K+CDFG S ++ S S VGT +Y++PE L Y
Sbjct: 126 IMHRDVKPSNILVN--SRGEIKLCDFGVS-GQLIDSMANSFVGTRSYMSPERLQGTHYSV 182
Query: 179 KIADVWSCGVTLYVMLVGAYPFEDPE 204
+ +D+WS G++L M VG YP P+
Sbjct: 183 Q-SDIWSMGLSLVEMAVGRYPIPPPD 207
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 104/206 (50%), Gaps = 7/206 (3%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFI--ERGQKIDEHVQREIMNHRSLKHPN 59
+ +E + ++G+GN GV V K + ++A K I E I + RE+ P
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 127
Query: 60 IVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSM-Q 118
IV F + ++I ME+ GG L + + AGR E +I G++Y +
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 187
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDG 178
I HRD+K N L++ + +K+CDFG S ++ S S VGT +Y++PE L Y
Sbjct: 188 IMHRDVKPSNILVN--SRGEIKLCDFGVS-GQLIDSMANSFVGTRSYMSPERLQGTHYSV 244
Query: 179 KIADVWSCGVTLYVMLVGAYPFEDPE 204
+ +D+WS G++L M VG YP P+
Sbjct: 245 Q-SDIWSMGLSLVEMAVGRYPIPPPD 269
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 123/272 (45%), Gaps = 26/272 (9%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE--RGQKIDEHVQREIMNHRSLKHPN 59
E + ++ IG G+FG D T++++A+K I+ + E +Q+EI P
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 60 IVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQI 119
+ ++ L T L I+MEY GG + + G E + ++++ G+ Y HS +
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKK 125
Query: 120 CHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLTKKEYDG 178
HRD+K N LL S VK+ DFG + ++T VGTP ++APEV+ + YD
Sbjct: 126 IHRDIKAANVLL--SEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDS 183
Query: 179 KIADVWSCGVTLYVMLVGAYPFEDPED-------PKNFRKTIGRILSVHYSFPDYVRVSL 231
K AD+WS G+T + G P + PKN T L +YS P
Sbjct: 184 K-ADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPT----LEGNYSKP------- 231
Query: 232 ECKHLLSRIFVANSEKRITIPEIKNHPWFLRN 263
K + R T E+ H + LRN
Sbjct: 232 -LKEFVEACLNKEPSFRPTAKELLKHKFILRN 262
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 104/206 (50%), Gaps = 7/206 (3%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFI--ERGQKIDEHVQREIMNHRSLKHPN 59
+ +E + ++G+GN GV V K + ++A K I E I + RE+ P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 60 IVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSM-Q 118
IV F + ++I ME+ GG L + + AGR E +I G++Y +
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 125
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDG 178
I HRD+K N L++ + +K+CDFG S ++ S S VGT +Y++PE L Y
Sbjct: 126 IMHRDVKPSNILVN--SRGEIKLCDFGVS-GQLIDSMANSFVGTRSYMSPERLQGTHYSV 182
Query: 179 KIADVWSCGVTLYVMLVGAYPFEDPE 204
+ +D+WS G++L M VG YP P+
Sbjct: 183 Q-SDIWSMGLSLVEMAVGRYPIPPPD 207
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 104/206 (50%), Gaps = 7/206 (3%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFI--ERGQKIDEHVQREIMNHRSLKHPN 59
+ +E + ++G+GN GV V K + ++A K I E I + RE+ P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 60 IVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSM-Q 118
IV F + ++I ME+ GG L + + AGR E +I G++Y +
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 125
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDG 178
I HRD+K N L++ + +K+CDFG S ++ S S VGT +Y++PE L Y
Sbjct: 126 IMHRDVKPSNILVN--SRGEIKLCDFGVS-GQLIDSMANSFVGTRSYMSPERLQGTHYSV 182
Query: 179 KIADVWSCGVTLYVMLVGAYPFEDPE 204
+ +D+WS G++L M VG YP P+
Sbjct: 183 Q-SDIWSMGLSLVEMAVGRYPIPPPD 207
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 127/266 (47%), Gaps = 9/266 (3%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFI--ERGQKIDEHVQREIMNHRSLKHPN 59
+ +E + ++G+GN GV V K + ++A K I E I + RE+ P
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 84
Query: 60 IVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSM-Q 118
IV F + ++I ME+ GG L + + AGR E +I G++Y +
Sbjct: 85 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 144
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDG 178
I HRD+K N L++ + +K+CDFG S ++ S S VGT +Y++PE L Y
Sbjct: 145 IMHRDVKPSNILVN--SRGEIKLCDFGVS-GQLIDSMANSFVGTRSYMSPERLQGTHYSV 201
Query: 179 KIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSV-HYSFPDYVRVSLECKHLL 237
+ +D+WS G++L M VG YP + + I++ P V SLE + +
Sbjct: 202 Q-SDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGV-FSLEFQDFV 259
Query: 238 SRIFVANSEKRITIPEIKNHPWFLRN 263
++ + N +R + ++ H + R+
Sbjct: 260 NKCLIKNPAERADLKQLMVHAFIKRS 285
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 124/273 (45%), Gaps = 28/273 (10%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE--RGQKIDEHVQREIMNHRSLKHPN 59
E + ++ IG G+FG D T++++A+K I+ + E +Q+EI P
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 60 IVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQI 119
+ ++ L T L I+MEY GG + + G E + ++++ G+ Y HS +
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKK 125
Query: 120 CHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLTKKEYD 177
HRD+K N LL S VK+ DFG + + +Q K VGTP ++APEV+ + YD
Sbjct: 126 IHRDIKAANVLL--SEHGEVKLADFGVA-GQLTDTQIKRNXFVGTPFWMAPEVIKQSAYD 182
Query: 178 GKIADVWSCGVTLYVMLVGAYPFEDPED-------PKNFRKTIGRILSVHYSFPDYVRVS 230
K AD+WS G+T + G P + PKN T L +YS P
Sbjct: 183 SK-ADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPT----LEGNYSKP------ 231
Query: 231 LECKHLLSRIFVANSEKRITIPEIKNHPWFLRN 263
K + R T E+ H + LRN
Sbjct: 232 --LKEFVEACLNKEPSFRPTAKELLKHKFILRN 262
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 104/206 (50%), Gaps = 7/206 (3%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFI--ERGQKIDEHVQREIMNHRSLKHPN 59
+ +E + ++G+GN GV V K + ++A K I E I + RE+ P
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 60 IVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSM-Q 118
IV F + ++I ME+ GG L + + AGR E +I G++Y +
Sbjct: 93 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 152
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDG 178
I HRD+K N L++ + +K+CDFG S ++ S S VGT +Y++PE L Y
Sbjct: 153 IMHRDVKPSNILVN--SRGEIKLCDFGVS-GQLIDSMANSFVGTRSYMSPERLQGTHYSV 209
Query: 179 KIADVWSCGVTLYVMLVGAYPFEDPE 204
+ +D+WS G++L M VG YP P+
Sbjct: 210 Q-SDIWSMGLSLVEMAVGRYPIPPPD 234
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 130/290 (44%), Gaps = 34/290 (11%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQ----REIMNHRSLK 56
M++YE ++ IG G +G +++ T E++A+K + R DE V REI + LK
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRV-RLDDDDEGVPSSALREICLLKELK 59
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGG-ELFERICNAGRFSEDEARFFFQQLISGVSYCH 115
H NIVR +VL + L +V E+ + + CN G + + F QL+ G+ +CH
Sbjct: 60 HKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCN-GDLDPEIVKSFLFQLLKGLGFCH 118
Query: 116 SMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLTKK 174
S + HRDLK +N L++ + +K+ +FG +++ + + S V T Y P+VL
Sbjct: 119 SRNVLHRDLKPQNLLINRNG--ELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGA 176
Query: 175 EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSV--------HYSFPDY 226
+ D+WS G + P D + K I R+L PDY
Sbjct: 177 KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDY 236
Query: 227 V----------------RVSLECKHLLSRIFVANSEKRITIPEIKNHPWF 260
+++ + LL + N +RI+ E HP+F
Sbjct: 237 KPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYF 286
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 105/211 (49%), Gaps = 10/211 (4%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVK-FIERG--QKIDEHVQREIMNHRSLKH 57
ME+YE + +G G++G+ R+K T ++A+K F+E + + + REI + L+H
Sbjct: 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRH 83
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGEL--FERICNAGRFSEDEARFFFQQLISGVSYCH 115
N+V EV +V E+ L E N + + F Q+I+G+ +CH
Sbjct: 84 ENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLF--QIINGIGFCH 141
Query: 116 SMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQP-KSTVGTPAYIAPEVLTKK 174
S I HRD+K EN L+ S + VK+CDFG++++ + V T Y APE+L
Sbjct: 142 SHNIIHRDIKPENILV--SQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGD 199
Query: 175 EYDGKIADVWSCGVTLYVMLVGAYPFEDPED 205
GK DVW+ G + M +G F D
Sbjct: 200 VKYGKAVDVWAIGCLVTEMFMGEPLFPGDSD 230
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 105/223 (47%), Gaps = 16/223 (7%)
Query: 60 IVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGR----FSEDEARFFFQQLISGVSYCH 115
IV T T L +VM GG++ I N F E A F+ Q++SG+ + H
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
Query: 116 SMQICHRDLKLENTLLDGSTAPRVKICDFGYS-KSSVLHSQPKSTVGTPAYIAPEVLTKK 174
I +RDLK EN LLD V+I D G + + ++ K GTP ++APE+L +
Sbjct: 307 QRNIIYRDLKPENVLLDDDG--NVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGE 364
Query: 175 EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECK 234
EYD + D ++ GVTLY M+ PF + ++ R+L ++PD + S K
Sbjct: 365 EYDFSV-DYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPD--KFSPASK 421
Query: 235 HLLSRIFVANSEKRITIPE-----IKNHPWFLRNLPIELTEGG 272
+ + EKR+ + ++ HP F R++ E G
Sbjct: 422 DFCEALLQKDPEKRLGFRDGSCDGLRTHPLF-RDISWRQLEAG 463
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 105/223 (47%), Gaps = 16/223 (7%)
Query: 60 IVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGR----FSEDEARFFFQQLISGVSYCH 115
IV T T L +VM GG++ I N F E A F+ Q++SG+ + H
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
Query: 116 SMQICHRDLKLENTLLDGSTAPRVKICDFGYS-KSSVLHSQPKSTVGTPAYIAPEVLTKK 174
I +RDLK EN LLD V+I D G + + ++ K GTP ++APE+L +
Sbjct: 307 QRNIIYRDLKPENVLLDDDG--NVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGE 364
Query: 175 EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECK 234
EYD + D ++ GVTLY M+ PF + ++ R+L ++PD + S K
Sbjct: 365 EYDFSV-DYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPD--KFSPASK 421
Query: 235 HLLSRIFVANSEKRITIPE-----IKNHPWFLRNLPIELTEGG 272
+ + EKR+ + ++ HP F R++ E G
Sbjct: 422 DFCEALLQKDPEKRLGFRDGSCDGLRTHPLF-RDISWRQLEAG 463
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 105/223 (47%), Gaps = 16/223 (7%)
Query: 60 IVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGR----FSEDEARFFFQQLISGVSYCH 115
IV T T L +VM GG++ I N F E A F+ Q++SG+ + H
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
Query: 116 SMQICHRDLKLENTLLDGSTAPRVKICDFGYS-KSSVLHSQPKSTVGTPAYIAPEVLTKK 174
I +RDLK EN LLD V+I D G + + ++ K GTP ++APE+L +
Sbjct: 307 QRNIIYRDLKPENVLLDDDG--NVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGE 364
Query: 175 EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECK 234
EYD + D ++ GVTLY M+ PF + ++ R+L ++PD + S K
Sbjct: 365 EYDFSV-DYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPD--KFSPASK 421
Query: 235 HLLSRIFVANSEKRITIPE-----IKNHPWFLRNLPIELTEGG 272
+ + EKR+ + ++ HP F R++ E G
Sbjct: 422 DFCEALLQKDPEKRLGFRDGSCDGLRTHPLF-RDISWRQLEAG 463
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 105/223 (47%), Gaps = 16/223 (7%)
Query: 60 IVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGR----FSEDEARFFFQQLISGVSYCH 115
IV T T L +VM GG++ I N F E A F+ Q++SG+ + H
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
Query: 116 SMQICHRDLKLENTLLDGSTAPRVKICDFGYS-KSSVLHSQPKSTVGTPAYIAPEVLTKK 174
I +RDLK EN LLD V+I D G + + ++ K GTP ++APE+L +
Sbjct: 307 QRNIIYRDLKPENVLLDDDG--NVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGE 364
Query: 175 EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECK 234
EYD + D ++ GVTLY M+ PF + ++ R+L ++PD + S K
Sbjct: 365 EYDFSV-DYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPD--KFSPASK 421
Query: 235 HLLSRIFVANSEKRITIPE-----IKNHPWFLRNLPIELTEGG 272
+ + EKR+ + ++ HP F R++ E G
Sbjct: 422 DFCEALLQKDPEKRLGFRDGSCDGLRTHPLF-RDISWRQLEAG 463
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 131/271 (48%), Gaps = 29/271 (10%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE-RGQKIDEHVQREIMNHRSLKHPNIVR 62
+EI+ ++G +FG ++K T L A K I+ + ++ E EI S HPNIV+
Sbjct: 14 WEIIGELG--DFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVK 71
Query: 63 FKEVLLTPTHLAIVMEYAAGGELFERICNAGR-FSEDEARFFFQQLISGVSYCHSMQICH 121
+ +L I++E+ AGG + + R +E + + +Q + ++Y H +I H
Sbjct: 72 LLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIH 131
Query: 122 RDLKLENTL--LDGSTAPRVKICDFGYS--KSSVLHSQPKSTVGTPAYIAPEVL---TKK 174
RDLK N L LDG +K+ DFG S + + S +GTP ++APEV+ T K
Sbjct: 132 RDLKAGNILFTLDGD----IKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSK 187
Query: 175 E--YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYV----R 228
+ YD K ADVWS G+TL M + E P + + +L + S P + R
Sbjct: 188 DRPYDYK-ADVWSLGITLIEM-------AEIEPPHHELNPMRVLLKIAKSEPPTLAQPSR 239
Query: 229 VSLECKHLLSRIFVANSEKRITIPEIKNHPW 259
S K L + N + R T ++ HP+
Sbjct: 240 WSSNFKDFLKKCLEKNVDARWTTSQLLQHPF 270
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 128/259 (49%), Gaps = 24/259 (9%)
Query: 5 EIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRFK 64
E+ + +G G FGV + + KW + +A+K IE + + E+ + HPNIV+
Sbjct: 12 EVEEVVGRGAFGV--VCKAKWRAKDVAIKQIESESERKAFIV-ELRQLSRVNHPNIVKLY 68
Query: 65 EVLLTPTHLAIVMEYAAGGELFERICNA---GRFSEDEARFFFQQLISGVSYCHSMQ--- 118
L P + +VMEYA GG L+ + A ++ A + Q GV+Y HSMQ
Sbjct: 69 GACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA 126
Query: 119 ICHRDLKLENTLL-DGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYD 177
+ HRDLK N LL G T +KICDFG + + + + G+ A++APEV Y
Sbjct: 127 LIHRDLKPPNLLLVAGGTV--LKICDFG--TACDIQTHMTNNKGSAAWMAPEVFEGSNYS 182
Query: 178 GKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSF--PDYVRVSLECKH 235
K DV+S G+ L+ ++ PF++ P FR + +VH P + +
Sbjct: 183 EK-CDVFSWGIILWEVITRRKPFDEIGGPA-FRI----MWAVHNGTRPPLIKNLPKPIES 236
Query: 236 LLSRIFVANSEKRITIPEI 254
L++R + + +R ++ EI
Sbjct: 237 LMTRCWSKDPSQRPSMEEI 255
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 133/287 (46%), Gaps = 14/287 (4%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFI--ERGQKIDEHVQREIMNHRSLKHPN 59
+ +E + ++G+GN GV V K + ++A K I E I + RE+ P
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 68
Query: 60 IVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSM-Q 118
IV F + ++I ME+ GG L + + AGR E +I G++Y +
Sbjct: 69 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 128
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDG 178
I HRD+K N L++ + +K+CDFG S ++ VGT +Y++PE L Y
Sbjct: 129 IMHRDVKPSNILVN--SRGEIKLCDFGVS-GQLIDEMANEFVGTRSYMSPERLQGTHYSV 185
Query: 179 KIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHLLS 238
+ +D+WS G++L M VG Y P P + + I++ SLE + ++
Sbjct: 186 Q-SDIWSMGLSLVEMAVGRY----PRPPMAIFELLDYIVNEPPPKLPSAVFSLEFQDFVN 240
Query: 239 RIFVANSEKRITIPEIKNHPWFLRNLPIELTEGGSW--QSHDVNNPS 283
+ + N +R + ++ H + R+ E+ G W + +N PS
Sbjct: 241 KCLIKNPAERADLKQLMVHAFIKRSDAEEVDFAG-WLCSTIGLNQPS 286
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 128/259 (49%), Gaps = 24/259 (9%)
Query: 5 EIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRFK 64
E+ + +G G FGV + + KW + +A+K IE + + E+ + HPNIV+
Sbjct: 11 EVEEVVGRGAFGV--VCKAKWRAKDVAIKQIESESERKAFIV-ELRQLSRVNHPNIVKLY 67
Query: 65 EVLLTPTHLAIVMEYAAGGELFERICNA---GRFSEDEARFFFQQLISGVSYCHSMQ--- 118
L P + +VMEYA GG L+ + A ++ A + Q GV+Y HSMQ
Sbjct: 68 GACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA 125
Query: 119 ICHRDLKLENTLL-DGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYD 177
+ HRDLK N LL G T +KICDFG + + + + G+ A++APEV Y
Sbjct: 126 LIHRDLKPPNLLLVAGGTV--LKICDFG--TACDIQTHMTNNKGSAAWMAPEVFEGSNYS 181
Query: 178 GKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSF--PDYVRVSLECKH 235
K DV+S G+ L+ ++ PF++ P FR + +VH P + +
Sbjct: 182 EK-CDVFSWGIILWEVITRRKPFDEIGGPA-FRI----MWAVHNGTRPPLIKNLPKPIES 235
Query: 236 LLSRIFVANSEKRITIPEI 254
L++R + + +R ++ EI
Sbjct: 236 LMTRCWSKDPSQRPSMEEI 254
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 125/277 (45%), Gaps = 28/277 (10%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSL----- 55
M + + + IG G FG R T ++ A+K +++ + + + +N R +
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 247
Query: 56 --KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
P IV TP L+ +++ GG+L + G FSE + RF+ ++I G+ +
Sbjct: 248 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEH 307
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVK----ICDFGYSKSSVLHSQPKSTVGTPAYIAPE 169
H+ + +RDLK N LLD R+ CDF K P ++VGT Y+APE
Sbjct: 308 MHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-------PHASVGTHGYMAPE 360
Query: 170 VLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRI-LSVHYSFPDYVR 228
VL K AD +S G L+ +L G PF + + I R+ L++ PD
Sbjct: 361 VLQKGVAYDSSADWFSLGCMLFKLLRGHSPFR--QHKTKDKHEIDRMTLTMAVELPD--S 416
Query: 229 VSLECKHLLSRIFVANSEKRITI-----PEIKNHPWF 260
S E + LL + + +R+ E+K P+F
Sbjct: 417 FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFF 453
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 125/277 (45%), Gaps = 28/277 (10%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSL----- 55
M + + + IG G FG R T ++ A+K +++ + + + +N R +
Sbjct: 187 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 246
Query: 56 --KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
P IV TP L+ +++ GG+L + G FSE + RF+ ++I G+ +
Sbjct: 247 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEH 306
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVK----ICDFGYSKSSVLHSQPKSTVGTPAYIAPE 169
H+ + +RDLK N LLD R+ CDF K P ++VGT Y+APE
Sbjct: 307 MHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-------PHASVGTHGYMAPE 359
Query: 170 VLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRI-LSVHYSFPDYVR 228
VL K AD +S G L+ +L G PF + + I R+ L++ PD
Sbjct: 360 VLQKGVAYDSSADWFSLGCMLFKLLRGHSPFR--QHKTKDKHEIDRMTLTMAVELPD--S 415
Query: 229 VSLECKHLLSRIFVANSEKRITI-----PEIKNHPWF 260
S E + LL + + +R+ E+K P+F
Sbjct: 416 FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFF 452
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 130/290 (44%), Gaps = 35/290 (12%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTR--ELLAVKFIERGQKIDEHVQREIMNHRSLKHP 58
ME+Y+ ++ +G G +GV +D R L ++ + I REI + L HP
Sbjct: 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHP 79
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGR--FSEDEARFFFQQLISGVSYCHS 116
NIV +V+ + L +V E+ +++ + + + + + + QL+ GV++CH
Sbjct: 80 NIVSLIDVIHSERCLTLVFEFMEKD--LKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQ 137
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKS-TVGTPAYIAPEVLTKKE 175
+I HRDLK +N L++ A +K+ DFG +++ + + + V T Y AP+VL +
Sbjct: 138 HRILHRDLKPQNLLINSDGA--LKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSK 195
Query: 176 YDGKIADVWSCGVTLYVMLVGAYPF----EDPEDPKNFRKTIG----------------- 214
D+WS G M+ G F +D + PK F +G
Sbjct: 196 KYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIF-SILGTPNPREWPQVQELPLWK 254
Query: 215 -RILSVHYSFPDYVRVSLECKH---LLSRIFVANSEKRITIPEIKNHPWF 260
R V P + C+ LLS + + KRI+ + NHP+F
Sbjct: 255 QRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYF 304
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 125/277 (45%), Gaps = 28/277 (10%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSL----- 55
M + + + IG G FG R T ++ A+K +++ + + + +N R +
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 247
Query: 56 --KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
P IV TP L+ +++ GG+L + G FSE + RF+ ++I G+ +
Sbjct: 248 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEH 307
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVK----ICDFGYSKSSVLHSQPKSTVGTPAYIAPE 169
H+ + +RDLK N LLD R+ CDF K P ++VGT Y+APE
Sbjct: 308 MHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-------PHASVGTHGYMAPE 360
Query: 170 VLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRI-LSVHYSFPDYVR 228
VL K AD +S G L+ +L G PF + + I R+ L++ PD
Sbjct: 361 VLQKGVAYDSSADWFSLGCMLFKLLRGHSPFR--QHKTKDKHEIDRMTLTMAVELPD--S 416
Query: 229 VSLECKHLLSRIFVANSEKRITI-----PEIKNHPWF 260
S E + LL + + +R+ E+K P+F
Sbjct: 417 FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFF 453
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 125/277 (45%), Gaps = 28/277 (10%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSL----- 55
M + + + IG G FG R T ++ A+K +++ + + + +N R +
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 247
Query: 56 --KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
P IV TP L+ +++ GG+L + G FSE + RF+ ++I G+ +
Sbjct: 248 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEH 307
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVK----ICDFGYSKSSVLHSQPKSTVGTPAYIAPE 169
H+ + +RDLK N LLD R+ CDF K P ++VGT Y+APE
Sbjct: 308 MHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-------PHASVGTHGYMAPE 360
Query: 170 VLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRI-LSVHYSFPDYVR 228
VL K AD +S G L+ +L G PF + + I R+ L++ PD
Sbjct: 361 VLQKGVAYDSSADWFSLGCMLFKLLRGHSPFR--QHKTKDKHEIDRMTLTMAVELPD--S 416
Query: 229 VSLECKHLLSRIFVANSEKRITI-----PEIKNHPWF 260
S E + LL + + +R+ E+K P+F
Sbjct: 417 FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFF 453
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 130/290 (44%), Gaps = 35/290 (12%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTR--ELLAVKFIERGQKIDEHVQREIMNHRSLKHP 58
ME+Y+ ++ +G G +GV +D R L ++ + I REI + L HP
Sbjct: 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHP 79
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGR--FSEDEARFFFQQLISGVSYCHS 116
NIV +V+ + L +V E+ +++ + + + + + + QL+ GV++CH
Sbjct: 80 NIVSLIDVIHSERCLTLVFEFMEKD--LKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQ 137
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKS-TVGTPAYIAPEVLTKKE 175
+I HRDLK +N L++ A +K+ DFG +++ + + + V T Y AP+VL +
Sbjct: 138 HRILHRDLKPQNLLINSDGA--LKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSK 195
Query: 176 YDGKIADVWSCGVTLYVMLVGAYPF----EDPEDPKNFRKTIG----------------- 214
D+WS G M+ G F +D + PK F +G
Sbjct: 196 KYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIF-SILGTPNPREWPQVQELPLWK 254
Query: 215 -RILSVHYSFPDYVRVSLECKH---LLSRIFVANSEKRITIPEIKNHPWF 260
R V P + C+ LLS + + KRI+ + NHP+F
Sbjct: 255 QRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYF 304
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 131/270 (48%), Gaps = 22/270 (8%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE-RGQKIDEHVQREIMNHRSLKHPNI 60
E +EIV ++G G FG ++K T L A K IE + ++ E EI + HP I
Sbjct: 11 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYI 70
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGELFERICNAGR-FSEDEARFFFQQLISGVSYCHSMQI 119
V+ L I++E+ GG + + R +E + + +Q++ +++ HS +I
Sbjct: 71 VKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRI 130
Query: 120 CHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPK-STVGTPAYIAPEVL---TKKE 175
HRDLK N L+ + +++ DFG S ++ Q + S +GTP ++APEV+ T K+
Sbjct: 131 IHRDLKAGNVLM--TLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKD 188
Query: 176 --YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYV----RV 229
YD K AD+WS G+TL M E P + + +L + S P + +
Sbjct: 189 TPYDYK-ADIWSLGITLIEM-------AQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKW 240
Query: 230 SLECKHLLSRIFVANSEKRITIPEIKNHPW 259
S+E + L N E R + ++ HP+
Sbjct: 241 SVEFRDFLKIALDKNPETRPSAAQLLEHPF 270
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 105/206 (50%), Gaps = 11/206 (5%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQ----REIMNHRSLK 56
ME+Y ++ IG G +GV ++ + E A+K I R +K DE + REI + LK
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNNYG-ETFALKKI-RLEKEDEGIPSTTIREISILKELK 58
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGG-ELFERICNAGRFSEDEARFFFQQLISGVSYCH 115
H NIV+ +V+ T L +V E+ + +C G A+ F QL++G++YCH
Sbjct: 59 HSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG-LESVTAKSFLLQLLNGIAYCH 117
Query: 116 SMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLTKK 174
++ HRDLK +N L++ +KI DFG +++ + + V T Y AP+VL
Sbjct: 118 DRRVLHRDLKPQNLLINREG--ELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGS 175
Query: 175 EYDGKIADVWSCGVTLYVMLVGAYPF 200
+ D+WS G M+ GA F
Sbjct: 176 KKYSTTIDIWSVGCIFAEMVNGAPLF 201
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 131/270 (48%), Gaps = 22/270 (8%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE-RGQKIDEHVQREIMNHRSLKHPNI 60
E +EIV ++G G FG ++K T L A K IE + ++ E EI + HP I
Sbjct: 19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYI 78
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGELFERICNAGR-FSEDEARFFFQQLISGVSYCHSMQI 119
V+ L I++E+ GG + + R +E + + +Q++ +++ HS +I
Sbjct: 79 VKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRI 138
Query: 120 CHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPK-STVGTPAYIAPEVL---TKKE 175
HRDLK N L+ + +++ DFG S ++ Q + S +GTP ++APEV+ T K+
Sbjct: 139 IHRDLKAGNVLM--TLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKD 196
Query: 176 --YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYV----RV 229
YD K AD+WS G+TL M E P + + +L + S P + +
Sbjct: 197 TPYDYK-ADIWSLGITLIEM-------AQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKW 248
Query: 230 SLECKHLLSRIFVANSEKRITIPEIKNHPW 259
S+E + L N E R + ++ HP+
Sbjct: 249 SVEFRDFLKIALDKNPETRPSAAQLLEHPF 278
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 102/192 (53%), Gaps = 17/192 (8%)
Query: 7 VKDIGSGNFGVAKLVRDKWTRELLAVKFIE-RGQKIDEHVQ---REIMNHRSLKHPNIVR 62
+++IG G+FG RD E++A+K + G++ +E Q +E+ + L+HPN ++
Sbjct: 59 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQ 118
Query: 63 FKEVLLTPTHLAIVMEYAAGG--ELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQIC 120
++ L +VMEY G +L E + E E + G++Y HS +
Sbjct: 119 YRGCYLREHTAWLVMEYCLGSASDLLE--VHKKPLQEVEIAAVTHGALQGLAYLHSHNMI 176
Query: 121 HRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEV---LTKKEYD 177
HRD+K N LL S VK+ DFG S+ + + VGTP ++APEV + + +YD
Sbjct: 177 HRDVKAGNILL--SEPGLVKLGDFG---SASIMAPANXFVGTPYWMAPEVILAMDEGQYD 231
Query: 178 GKIADVWSCGVT 189
GK+ DVWS G+T
Sbjct: 232 GKV-DVWSLGIT 242
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 102/192 (53%), Gaps = 17/192 (8%)
Query: 7 VKDIGSGNFGVAKLVRDKWTRELLAVKFIE-RGQKIDEHVQ---REIMNHRSLKHPNIVR 62
+++IG G+FG RD E++A+K + G++ +E Q +E+ + L+HPN ++
Sbjct: 20 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQ 79
Query: 63 FKEVLLTPTHLAIVMEYAAGG--ELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQIC 120
++ L +VMEY G +L E + E E + G++Y HS +
Sbjct: 80 YRGCYLREHTAWLVMEYCLGSASDLLE--VHKKPLQEVEIAAVTHGALQGLAYLHSHNMI 137
Query: 121 HRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEV---LTKKEYD 177
HRD+K N LL S VK+ DFG S+ + + VGTP ++APEV + + +YD
Sbjct: 138 HRDVKAGNILL--SEPGLVKLGDFG---SASIMAPANXFVGTPYWMAPEVILAMDEGQYD 192
Query: 178 GKIADVWSCGVT 189
GK+ DVWS G+T
Sbjct: 193 GKV-DVWSLGIT 203
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 108/218 (49%), Gaps = 24/218 (11%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFI--ERGQKIDEHVQREIMNHRSLKHPN 59
+ YE+ + IGSG V + +E +A+K I E+ Q + + +EI HPN
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 60 IVRFKEVLLTPTHLAIVMEYAAGGELFERICN--------AGRFSEDEARFFFQQLISGV 111
IV + + L +VM+ +GG + + I + +G E ++++ G+
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 112 SYCHSMQICHRDLKLENTLL--DGSTAPRVKICDFGYSK-----SSVLHSQPKST-VGTP 163
Y H HRD+K N LL DGS V+I DFG S + ++ + T VGTP
Sbjct: 130 EYLHKNGQIHRDVKAGNILLGEDGS----VQIADFGVSAFLATGGDITRNKVRKTFVGTP 185
Query: 164 AYIAPEVLTK-KEYDGKIADVWSCGVTLYVMLVGAYPF 200
++APEV+ + + YD K AD+WS G+T + GA P+
Sbjct: 186 CWMAPEVMEQVRGYDFK-ADIWSFGITAIELATGAAPY 222
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 108/218 (49%), Gaps = 24/218 (11%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFI--ERGQKIDEHVQREIMNHRSLKHPN 59
+ YE+ + IGSG V + +E +A+K I E+ Q + + +EI HPN
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 60 IVRFKEVLLTPTHLAIVMEYAAGGELFERICN--------AGRFSEDEARFFFQQLISGV 111
IV + + L +VM+ +GG + + I + +G E ++++ G+
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 112 SYCHSMQICHRDLKLENTLL--DGSTAPRVKICDFGYSK-----SSVLHSQPKST-VGTP 163
Y H HRD+K N LL DGS V+I DFG S + ++ + T VGTP
Sbjct: 135 EYLHKNGQIHRDVKAGNILLGEDGS----VQIADFGVSAFLATGGDITRNKVRKTFVGTP 190
Query: 164 AYIAPEVLTK-KEYDGKIADVWSCGVTLYVMLVGAYPF 200
++APEV+ + + YD K AD+WS G+T + GA P+
Sbjct: 191 CWMAPEVMEQVRGYDFK-ADIWSFGITAIELATGAAPY 227
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 104/206 (50%), Gaps = 11/206 (5%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQ----REIMNHRSLK 56
ME+Y ++ IG G +GV ++ + E A+K I R +K DE + REI + LK
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNNYG-ETFALKKI-RLEKEDEGIPSTTIREISILKELK 58
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGG-ELFERICNAGRFSEDEARFFFQQLISGVSYCH 115
H NIV+ +V+ T L +V E+ + +C G A+ F QL++G++YCH
Sbjct: 59 HSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG-LESVTAKSFLLQLLNGIAYCH 117
Query: 116 SMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLTKK 174
++ HRDLK +N L++ +KI DFG +++ + + V T Y AP+VL
Sbjct: 118 DRRVLHRDLKPQNLLINREG--ELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGS 175
Query: 175 EYDGKIADVWSCGVTLYVMLVGAYPF 200
+ D+WS G M+ G F
Sbjct: 176 KKYSTTIDIWSVGCIFAEMVNGTPLF 201
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 102/207 (49%), Gaps = 23/207 (11%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRF 63
Y K IG+G+FGV + + EL+A+K + +G+ RE+ R L H NIVR
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK---NRELQIMRKLDHCNIVRL 78
Query: 64 KEVLLTP------THLAIVMEYAAGGELFERICNAGRFSEDE-------ARFFFQQLISG 110
+ + +L +V++Y E R+ A +S + + + QL
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVP--ETVYRV--ARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 111 VSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPE- 169
++Y HS ICHRD+K +N LLD TA +K+CDFG +K V S + + Y APE
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 193
Query: 170 VLTKKEYDGKIADVWSCGVTLYVMLVG 196
+ +Y I DVWS G L +L+G
Sbjct: 194 IFGATDYTSSI-DVWSAGCVLAELLLG 219
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 102/207 (49%), Gaps = 23/207 (11%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRF 63
Y K IG+G+FGV + + EL+A+K + +G+ RE+ R L H NIVR
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK---NRELQIMRKLDHCNIVRL 78
Query: 64 KEVLLTP------THLAIVMEYAAGGELFERICNAGRFSEDE-------ARFFFQQLISG 110
+ + +L +V++Y E R+ A +S + + + QL
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVP--ETVYRV--ARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 111 VSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPE- 169
++Y HS ICHRD+K +N LLD TA +K+CDFG +K V S + + Y APE
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 193
Query: 170 VLTKKEYDGKIADVWSCGVTLYVMLVG 196
+ +Y I DVWS G L +L+G
Sbjct: 194 IFGATDYTSSI-DVWSAGCVLAELLLG 219
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 94/197 (47%), Gaps = 12/197 (6%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRFKEVLLT 69
+G G+FG ++DK T AVK + +++ E++ L P IV +
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKV----RLEVFRVEELVACAGLSSPRIVPLYGAVRE 137
Query: 70 PTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENT 129
+ I ME GG L + I G ED A ++ Q + G+ Y H+ +I H D+K +N
Sbjct: 138 GPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNV 197
Query: 130 LLDGSTAPRVKICDFGYSKSSVLHSQPKSTV------GTPAYIAPEVLTKKEYDGKIADV 183
LL S R +CDFG++ KS + GT ++APEV+ K D K+ D+
Sbjct: 198 LLS-SDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKV-DI 255
Query: 184 WSCGVTLYVMLVGAYPF 200
WS + ML G +P+
Sbjct: 256 WSSCCMMLHMLNGCHPW 272
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 104/206 (50%), Gaps = 11/206 (5%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQ----REIMNHRSLK 56
ME+Y ++ IG G +GV ++ + E A+K I R +K DE + REI + LK
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNNYG-ETFALKKI-RLEKEDEGIPSTTIREISILKELK 58
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGG-ELFERICNAGRFSEDEARFFFQQLISGVSYCH 115
H NIV+ +V+ T L +V E+ + +C G A+ F QL++G++YCH
Sbjct: 59 HSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG-LESVTAKSFLLQLLNGIAYCH 117
Query: 116 SMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLTKK 174
++ HRDLK +N L++ +KI DFG +++ + + + T Y AP+VL
Sbjct: 118 DRRVLHRDLKPQNLLINREG--ELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGS 175
Query: 175 EYDGKIADVWSCGVTLYVMLVGAYPF 200
+ D+WS G M+ G F
Sbjct: 176 KKYSTTIDIWSVGCIFAEMVNGTPLF 201
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 94/197 (47%), Gaps = 12/197 (6%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRFKEVLLT 69
+G G+FG ++DK T AVK + +++ E++ L P IV +
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKV----RLEVFRVEELVACAGLSSPRIVPLYGAVRE 121
Query: 70 PTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENT 129
+ I ME GG L + I G ED A ++ Q + G+ Y H+ +I H D+K +N
Sbjct: 122 GPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNV 181
Query: 130 LLDGSTAPRVKICDFGYSKSSVLHSQPKSTV------GTPAYIAPEVLTKKEYDGKIADV 183
LL S R +CDFG++ KS + GT ++APEV+ K D K+ D+
Sbjct: 182 LLS-SDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKV-DI 239
Query: 184 WSCGVTLYVMLVGAYPF 200
WS + ML G +P+
Sbjct: 240 WSSCCMMLHMLNGCHPW 256
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 100/204 (49%), Gaps = 17/204 (8%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRF 63
Y K IG+G+FGV + + EL+A+K + +G+ RE+ R L H NIVR
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK---NRELQIMRKLDHCNIVRL 78
Query: 64 KEVLLTP------THLAIVMEYAAGGELFERICNAGRFSED----EARFFFQQLISGVSY 113
+ + +L +V++Y ++ + R + + + QL ++Y
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPA-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPE-VLT 172
HS ICHRD+K +N LLD TA +K+CDFG +K V S + + Y APE +
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 196
Query: 173 KKEYDGKIADVWSCGVTLYVMLVG 196
+Y I DVWS G L +L+G
Sbjct: 197 ATDYTSSI-DVWSAGCVLAELLLG 219
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 95/199 (47%), Gaps = 16/199 (8%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRFKEVLLT 69
+G G+FG + DK T AVK + +++ E+M L P IV +
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKV----RLEVFRAEELMACAGLTSPRIVPLYGAVRE 156
Query: 70 PTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENT 129
+ I ME GG L + + G ED A ++ Q + G+ Y HS +I H D+K +N
Sbjct: 157 GPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNV 216
Query: 130 LL--DGSTAPRVKICDFGYSKSSVLHSQPKSTV------GTPAYIAPEVLTKKEYDGKIA 181
LL DGS A +CDFG++ KS + GT ++APEV+ + D K+
Sbjct: 217 LLSSDGSHA---ALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKV- 272
Query: 182 DVWSCGVTLYVMLVGAYPF 200
DVWS + ML G +P+
Sbjct: 273 DVWSSCCMMLHMLNGCHPW 291
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 103/206 (50%), Gaps = 12/206 (5%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTREL-LAVKFIERGQKIDEHVQREIMNHRSLKHPNI 60
E ++K++GSG FGV KL KW + +AVK I+ G ++ +E L HP +
Sbjct: 8 EEITLLKELGSGQFGVVKL--GKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKL 65
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARF-FFQQLISGVSYCHSMQI 119
V+F V + IV EY + G L + + G+ E + G+++ S Q
Sbjct: 66 VKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQF 125
Query: 120 CHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTP---AYIAPEVLTKKEY 176
HRDL N L+D VK+ DFG ++ VL Q S+VGT + APEV +Y
Sbjct: 126 IHRDLAARNCLVDRDLC--VKVSDFGMTR-YVLDDQYVSSVGTKFPVKWSAPEVFHYFKY 182
Query: 177 DGKIADVWSCGVTLY-VMLVGAYPFE 201
K +DVW+ G+ ++ V +G P++
Sbjct: 183 SSK-SDVWAFGILMWEVFSLGKMPYD 207
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 94/197 (47%), Gaps = 12/197 (6%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRFKEVLLT 69
+G G+FG ++DK T AVK + +++ E++ L P IV +
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKV----RLEVFRVEELVACAGLSSPRIVPLYGAVRE 135
Query: 70 PTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENT 129
+ I ME GG L + I G ED A ++ Q + G+ Y H+ +I H D+K +N
Sbjct: 136 GPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNV 195
Query: 130 LLDGSTAPRVKICDFGYSKSSVLHSQPKSTV------GTPAYIAPEVLTKKEYDGKIADV 183
LL S R +CDFG++ KS + GT ++APEV+ K D K+ D+
Sbjct: 196 LLS-SDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKV-DI 253
Query: 184 WSCGVTLYVMLVGAYPF 200
WS + ML G +P+
Sbjct: 254 WSSCCMMLHMLNGCHPW 270
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 102/207 (49%), Gaps = 23/207 (11%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRF 63
Y K IG+G+FGV + + EL+A+K + + ++ RE+ R L H NIVR
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVRL 78
Query: 64 KEVLLTP------THLAIVMEYAAGGELFERICNAGRFSEDE-------ARFFFQQLISG 110
+ + +L +V++Y E R+ A +S + + + QL
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVP--ETVYRV--ARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 111 VSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPE- 169
++Y HS ICHRD+K +N LLD TA +K+CDFG +K V S + + Y APE
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 193
Query: 170 VLTKKEYDGKIADVWSCGVTLYVMLVG 196
+ +Y I DVWS G L +L+G
Sbjct: 194 IFGATDYTSSI-DVWSAGCVLAELLLG 219
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 102/207 (49%), Gaps = 23/207 (11%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRF 63
Y K IG+G+FGV + + EL+A+K + + ++ RE+ R L H NIVR
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVRL 79
Query: 64 KEVLLTP------THLAIVMEYAAGGELFERICNAGRFSEDE-------ARFFFQQLISG 110
+ + +L +V++Y E R+ A +S + + + QL
Sbjct: 80 RYFFYSSGEKKDEVYLNLVLDYVP--ETVYRV--ARHYSRAKQTLPVIYVKLYMYQLFRS 135
Query: 111 VSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPE- 169
++Y HS ICHRD+K +N LLD TA +K+CDFG +K V S + + Y APE
Sbjct: 136 LAYIHSFGICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 194
Query: 170 VLTKKEYDGKIADVWSCGVTLYVMLVG 196
+ +Y I DVWS G L +L+G
Sbjct: 195 IFGATDYTSSI-DVWSAGCVLAELLLG 220
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 102/207 (49%), Gaps = 23/207 (11%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRF 63
Y K IG+G+FGV + + EL+A+K + + ++ RE+ R L H NIVR
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVRL 78
Query: 64 KEVLLTP------THLAIVMEYAAGGELFERICNAGRFSEDE-------ARFFFQQLISG 110
+ + +L +V++Y E R+ A +S + + + QL
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVP--ETVYRV--ARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 111 VSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPE- 169
++Y HS ICHRD+K +N LLD TA +K+CDFG +K V S + + Y APE
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 193
Query: 170 VLTKKEYDGKIADVWSCGVTLYVMLVG 196
+ +Y I DVWS G L +L+G
Sbjct: 194 IFGATDYTSSI-DVWSAGCVLAELLLG 219
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 102/207 (49%), Gaps = 23/207 (11%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRF 63
Y K IG+G+FGV + + EL+A+K + + ++ RE+ R L H NIVR
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVRL 86
Query: 64 KEVLLTP------THLAIVMEYAAGGELFERICNAGRFSEDE-------ARFFFQQLISG 110
+ + +L +V++Y E R+ A +S + + + QL
Sbjct: 87 RYFFYSSGEKKDEVYLNLVLDYVP--ETVYRV--ARHYSRAKQTLPVIYVKLYMYQLFRS 142
Query: 111 VSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPE- 169
++Y HS ICHRD+K +N LLD TA +K+CDFG +K V S + + Y APE
Sbjct: 143 LAYIHSFGICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 201
Query: 170 VLTKKEYDGKIADVWSCGVTLYVMLVG 196
+ +Y I DVWS G L +L+G
Sbjct: 202 IFGATDYTSSI-DVWSAGCVLAELLLG 227
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 102/207 (49%), Gaps = 23/207 (11%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRF 63
Y K IG+G+FGV + + EL+A+K + + ++ RE+ R L H NIVR
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVRL 78
Query: 64 KEVLLTP------THLAIVMEYAAGGELFERICNAGRFSEDE-------ARFFFQQLISG 110
+ + +L +V++Y E R+ A +S + + + QL
Sbjct: 79 RYFFYSSGEKKDVVYLNLVLDYVP--ETVYRV--ARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 111 VSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPE- 169
++Y HS ICHRD+K +N LLD TA +K+CDFG +K V S + + Y APE
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 193
Query: 170 VLTKKEYDGKIADVWSCGVTLYVMLVG 196
+ +Y I DVWS G L +L+G
Sbjct: 194 IFGATDYTSSI-DVWSAGCVLAELLLG 219
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 102/207 (49%), Gaps = 23/207 (11%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRF 63
Y K IG+G+FGV + + EL+A+K + + ++ RE+ R L H NIVR
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVRL 97
Query: 64 KEVLLTP------THLAIVMEYAAGGELFERICNAGRFSEDE-------ARFFFQQLISG 110
+ + +L +V++Y E R+ A +S + + + QL
Sbjct: 98 RYFFYSSGEKKDEVYLNLVLDYVP--ETVYRV--ARHYSRAKQTLPVIYVKLYMYQLFRS 153
Query: 111 VSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPE- 169
++Y HS ICHRD+K +N LLD TA +K+CDFG +K V S + + Y APE
Sbjct: 154 LAYIHSFGICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 212
Query: 170 VLTKKEYDGKIADVWSCGVTLYVMLVG 196
+ +Y I DVWS G L +L+G
Sbjct: 213 IFGATDYTSSI-DVWSAGCVLAELLLG 238
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 102/207 (49%), Gaps = 23/207 (11%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRF 63
Y K IG+G+FGV + + EL+A+K + + ++ RE+ R L H NIVR
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVRL 90
Query: 64 KEVLLTP------THLAIVMEYAAGGELFERICNAGRFSEDE-------ARFFFQQLISG 110
+ + +L +V++Y E R+ A +S + + + QL
Sbjct: 91 RYFFYSSGEKKDEVYLNLVLDYVP--ETVYRV--ARHYSRAKQTLPVIYVKLYMYQLFRS 146
Query: 111 VSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPE- 169
++Y HS ICHRD+K +N LLD TA +K+CDFG +K V S + + Y APE
Sbjct: 147 LAYIHSFGICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 205
Query: 170 VLTKKEYDGKIADVWSCGVTLYVMLVG 196
+ +Y I DVWS G L +L+G
Sbjct: 206 IFGATDYTSSI-DVWSAGCVLAELLLG 231
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 102/207 (49%), Gaps = 23/207 (11%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRF 63
Y K IG+G+FGV + + EL+A+K + + ++ RE+ R L H NIVR
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVRL 90
Query: 64 KEVLLTP------THLAIVMEYAAGGELFERICNAGRFSEDE-------ARFFFQQLISG 110
+ + +L +V++Y E R+ A +S + + + QL
Sbjct: 91 RYFFYSSGEKKDEVYLNLVLDYVP--ETVYRV--ARHYSRAKQTLPVIYVKLYMYQLFRS 146
Query: 111 VSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPE- 169
++Y HS ICHRD+K +N LLD TA +K+CDFG +K V S + + Y APE
Sbjct: 147 LAYIHSFGICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 205
Query: 170 VLTKKEYDGKIADVWSCGVTLYVMLVG 196
+ +Y I DVWS G L +L+G
Sbjct: 206 IFGATDYTSSI-DVWSAGCVLAELLLG 231
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 102/207 (49%), Gaps = 23/207 (11%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRF 63
Y K IG+G+FGV + + EL+A+K + + ++ RE+ R L H NIVR
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVRL 82
Query: 64 KEVLLTP------THLAIVMEYAAGGELFERICNAGRFSEDE-------ARFFFQQLISG 110
+ + +L +V++Y E R+ A +S + + + QL
Sbjct: 83 RYFFYSSGEKKDEVYLNLVLDYVP--ETVYRV--ARHYSRAKQTLPVIYVKLYMYQLFRS 138
Query: 111 VSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPE- 169
++Y HS ICHRD+K +N LLD TA +K+CDFG +K V S + + Y APE
Sbjct: 139 LAYIHSFGICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 197
Query: 170 VLTKKEYDGKIADVWSCGVTLYVMLVG 196
+ +Y I DVWS G L +L+G
Sbjct: 198 IFGATDYTSSI-DVWSAGCVLAELLLG 223
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 102/207 (49%), Gaps = 23/207 (11%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRF 63
Y K IG+G+FGV + + EL+A+K + + ++ RE+ R L H NIVR
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVRL 112
Query: 64 KEVLLTP------THLAIVMEYAAGGELFERICNAGRFSEDE-------ARFFFQQLISG 110
+ + +L +V++Y E R+ A +S + + + QL
Sbjct: 113 RYFFYSSGEKKDEVYLNLVLDYVP--ETVYRV--ARHYSRAKQTLPVIYVKLYMYQLFRS 168
Query: 111 VSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPE- 169
++Y HS ICHRD+K +N LLD TA +K+CDFG +K V S + + Y APE
Sbjct: 169 LAYIHSFGICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 227
Query: 170 VLTKKEYDGKIADVWSCGVTLYVMLVG 196
+ +Y I DVWS G L +L+G
Sbjct: 228 IFGATDYTSSI-DVWSAGCVLAELLLG 253
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 102/207 (49%), Gaps = 23/207 (11%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRF 63
Y K IG+G+FGV + + EL+A+K + + ++ RE+ R L H NIVR
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVRL 91
Query: 64 KEVLLTP------THLAIVMEYAAGGELFERICNAGRFSEDE-------ARFFFQQLISG 110
+ + +L +V++Y E R+ A +S + + + QL
Sbjct: 92 RYFFYSSGEKKDEVYLNLVLDYVP--ETVYRV--ARHYSRAKQTLPVIYVKLYMYQLFRS 147
Query: 111 VSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPE- 169
++Y HS ICHRD+K +N LLD TA +K+CDFG +K V S + + Y APE
Sbjct: 148 LAYIHSFGICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 206
Query: 170 VLTKKEYDGKIADVWSCGVTLYVMLVG 196
+ +Y I DVWS G L +L+G
Sbjct: 207 IFGATDYTSSI-DVWSAGCVLAELLLG 232
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 102/207 (49%), Gaps = 23/207 (11%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRF 63
Y K IG+G+FGV + + EL+A+K + + ++ RE+ R L H NIVR
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVRL 83
Query: 64 KEVLLTP------THLAIVMEYAAGGELFERICNAGRFSEDE-------ARFFFQQLISG 110
+ + +L +V++Y E R+ A +S + + + QL
Sbjct: 84 RYFFYSSGEKKDEVYLNLVLDYVP--ETVYRV--ARHYSRAKQTLPVIYVKLYMYQLFRS 139
Query: 111 VSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPE- 169
++Y HS ICHRD+K +N LLD TA +K+CDFG +K V S + + Y APE
Sbjct: 140 LAYIHSFGICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 198
Query: 170 VLTKKEYDGKIADVWSCGVTLYVMLVG 196
+ +Y I DVWS G L +L+G
Sbjct: 199 IFGATDYTSSI-DVWSAGCVLAELLLG 224
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 131/283 (46%), Gaps = 31/283 (10%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREI-MNHRSLKHPNIVR 62
+E+V+ +G+G +G R T +L A+K ++ +E +++EI M + H NI
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIAT 85
Query: 63 FKEVLLTPT------HLAIVMEYAAGGELFERICN--AGRFSEDEARFFFQQLISGVSYC 114
+ + L +VME+ G + + I N E+ + ++++ G+S+
Sbjct: 86 YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHL 145
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLTK 173
H ++ HRD+K +N LL + VK+ DFG S ++T +GTP ++APEV+
Sbjct: 146 HQHKVIHRDIKGQNVLL--TENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIAC 203
Query: 174 KE-----YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNF----RKTIGRILSVHYSFP 224
E YD K +D+WS G+T M GA P D + R R+ S +
Sbjct: 204 DENPDATYDFK-SDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKW--- 259
Query: 225 DYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLRNLPIE 267
S + + + V N +R ++ HP F+R+ P E
Sbjct: 260 -----SKKFQSFIESCLVKNHSQRPATEQLMKHP-FIRDQPNE 296
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 102/207 (49%), Gaps = 23/207 (11%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRF 63
Y K IG+G+FGV + + EL+A+K + + ++ RE+ R L H NIVR
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVRL 78
Query: 64 KEVLLTP------THLAIVMEYAAGGELFERICNAGRFSEDE-------ARFFFQQLISG 110
+ + +L +V++Y E R+ A +S + + + QL
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVP--ETVYRV--ARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 111 VSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPE- 169
++Y HS ICHRD+K +N LLD TA +K+CDFG +K V S + + Y APE
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 193
Query: 170 VLTKKEYDGKIADVWSCGVTLYVMLVG 196
+ +Y I DVWS G L +L+G
Sbjct: 194 IFGATDYTSSI-DVWSAGCVLAELLLG 219
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 102/207 (49%), Gaps = 23/207 (11%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRF 63
Y K IG+G+FGV + + EL+A+K + + ++ RE+ R L H NIVR
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVRL 157
Query: 64 KEVLLTP------THLAIVMEYAAGGELFERICNAGRFSEDE-------ARFFFQQLISG 110
+ + +L +V++Y E R+ A +S + + + QL
Sbjct: 158 RYFFYSSGEKKDEVYLNLVLDYVP--ETVYRV--ARHYSRAKQTLPVIYVKLYMYQLFRS 213
Query: 111 VSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPE- 169
++Y HS ICHRD+K +N LLD TA +K+CDFG +K V S + + Y APE
Sbjct: 214 LAYIHSFGICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 272
Query: 170 VLTKKEYDGKIADVWSCGVTLYVMLVG 196
+ +Y I DVWS G L +L+G
Sbjct: 273 IFGATDYTSSI-DVWSAGCVLAELLLG 298
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 102/207 (49%), Gaps = 23/207 (11%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRF 63
Y K IG+G+FGV + + EL+A+K + + ++ RE+ R L H NIVR
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVRL 112
Query: 64 KEVLLTP------THLAIVMEYAAGGELFERICNAGRFSEDE-------ARFFFQQLISG 110
+ + +L +V++Y E R+ A +S + + + QL
Sbjct: 113 RYFFYSSGEKKDEVYLNLVLDYVP--ETVYRV--ARHYSRAKQTLPVIYVKLYMYQLFRS 168
Query: 111 VSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPE- 169
++Y HS ICHRD+K +N LLD TA +K+CDFG +K V S + + Y APE
Sbjct: 169 LAYIHSFGICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 227
Query: 170 VLTKKEYDGKIADVWSCGVTLYVMLVG 196
+ +Y I DVWS G L +L+G
Sbjct: 228 IFGATDYTSSI-DVWSAGCVLAELLLG 253
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 102/207 (49%), Gaps = 23/207 (11%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRF 63
Y K IG+G+FGV + + EL+A+K + + ++ RE+ R L H NIVR
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVRL 106
Query: 64 KEVLLTP------THLAIVMEYAAGGELFERICNAGRFSEDE-------ARFFFQQLISG 110
+ + +L +V++Y E R+ A +S + + + QL
Sbjct: 107 RYFFYSSGEKKDEVYLNLVLDYVP--ETVYRV--ARHYSRAKQTLPVIYVKLYMYQLFRS 162
Query: 111 VSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPE- 169
++Y HS ICHRD+K +N LLD TA +K+CDFG +K V S + + Y APE
Sbjct: 163 LAYIHSFGICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 221
Query: 170 VLTKKEYDGKIADVWSCGVTLYVMLVG 196
+ +Y I DVWS G L +L+G
Sbjct: 222 IFGATDYTSSI-DVWSAGCVLAELLLG 247
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 102/207 (49%), Gaps = 23/207 (11%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRF 63
Y K IG+G+FGV + + EL+A+K + + ++ RE+ R L H NIVR
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVRL 114
Query: 64 KEVLLTP------THLAIVMEYAAGGELFERICNAGRFSEDE-------ARFFFQQLISG 110
+ + +L +V++Y E R+ A +S + + + QL
Sbjct: 115 RYFFYSSGEKKDEVYLNLVLDYVP--ETVYRV--ARHYSRAKQTLPVIYVKLYMYQLFRS 170
Query: 111 VSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPE- 169
++Y HS ICHRD+K +N LLD TA +K+CDFG +K V S + + Y APE
Sbjct: 171 LAYIHSFGICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 229
Query: 170 VLTKKEYDGKIADVWSCGVTLYVMLVG 196
+ +Y I DVWS G L +L+G
Sbjct: 230 IFGATDYTSSI-DVWSAGCVLAELLLG 255
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 102/207 (49%), Gaps = 23/207 (11%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRF 63
Y K IG+G+FGV + + EL+A+K + + ++ RE+ R L H NIVR
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVRL 116
Query: 64 KEVLLTP------THLAIVMEYAAGGELFERICNAGRFSEDE-------ARFFFQQLISG 110
+ + +L +V++Y E R+ A +S + + + QL
Sbjct: 117 RYFFYSSGEKKDEVYLNLVLDYVP--ETVYRV--ARHYSRAKQTLPVIYVKLYMYQLFRS 172
Query: 111 VSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPE- 169
++Y HS ICHRD+K +N LLD TA +K+CDFG +K V S + + Y APE
Sbjct: 173 LAYIHSFGICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 231
Query: 170 VLTKKEYDGKIADVWSCGVTLYVMLVG 196
+ +Y I DVWS G L +L+G
Sbjct: 232 IFGATDYTSSI-DVWSAGCVLAELLLG 257
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 131/293 (44%), Gaps = 39/293 (13%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFI--ERGQKIDEHVQREIMNHRSLKHP 58
ME Y + +G G + + K T L+A+K I E + RE+ + LKH
Sbjct: 1 METYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHA 60
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRF-SEDEARFFFQQLISGVSYCHSM 117
NIV +++ T L +V EY +L + + + G + + F QL+ G++YCH
Sbjct: 61 NIVTLHDIIHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ 119
Query: 118 QICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQP-KSTVGTPAYIAPEVLT-KKE 175
++ HRDLK +N L++ +K+ DFG +++ + ++ + V T Y P++L +
Sbjct: 120 KVLHRDLKPQNLLINERG--ELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTD 177
Query: 176 YDGKIADVWSCGVTLYVMLVG--AYPFEDPEDPKNFRKTIGRILSV-------------- 219
Y +I D+W G Y M G +P E+ +F I RIL
Sbjct: 178 YSTQI-DMWGVGCIFYEMATGRPLFPGSTVEEQLHF---IFRILGTPTEETWPGILSNEE 233
Query: 220 --HYSFPDYV---------RVSLECKHLLSRIFVANSEKRITIPEIKNHPWFL 261
Y++P Y R+ + LL+++ RI+ + HP+FL
Sbjct: 234 FKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFL 286
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 94/199 (47%), Gaps = 16/199 (8%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRFKEVLLT 69
+G G+FG + DK T AVK + +++ E+M L P IV +
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKV----RLEVFRAEELMACAGLTSPRIVPLYGAVRE 137
Query: 70 PTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENT 129
+ I ME GG L + + G ED A ++ Q + G+ Y HS +I H D+K +N
Sbjct: 138 GPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNV 197
Query: 130 LL--DGSTAPRVKICDFGYSKSSVLHSQPKSTV------GTPAYIAPEVLTKKEYDGKIA 181
LL DGS A +CDFG++ K + GT ++APEV+ + D K+
Sbjct: 198 LLSSDGSHA---ALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKV- 253
Query: 182 DVWSCGVTLYVMLVGAYPF 200
DVWS + ML G +P+
Sbjct: 254 DVWSSCCMMLHMLNGCHPW 272
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 97/212 (45%), Gaps = 19/212 (8%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFI--ERGQKIDEHVQREIMNHRSLKHPNIV 61
+E+ + +G+G FG + T E +A+K E K E EI + L HPN+V
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 62 RFKEV-----LLTPTHLAIV-MEYAAGGEL------FERICNAGRFSEDEARFFFQQLIS 109
+EV L P L ++ MEY GG+L FE C E R + S
Sbjct: 76 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCG---LKEGPIRTLLSDISS 132
Query: 110 GVSYCHSMQICHRDLKLENTLLDGSTAPRV-KICDFGYSKSSVLHSQPKSTVGTPAYIAP 168
+ Y H +I HRDLK EN +L + KI D GY+K VGT Y+AP
Sbjct: 133 ALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAP 192
Query: 169 EVLTKKEYDGKIADVWSCGVTLYVMLVGAYPF 200
E+L +K+Y + D WS G + + G PF
Sbjct: 193 ELLEQKKYTVTV-DYWSFGTLAFECITGFRPF 223
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 97/212 (45%), Gaps = 19/212 (8%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFI--ERGQKIDEHVQREIMNHRSLKHPNIV 61
+E+ + +G+G FG + T E +A+K E K E EI + L HPN+V
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 62 RFKEV-----LLTPTHLAIV-MEYAAGGEL------FERICNAGRFSEDEARFFFQQLIS 109
+EV L P L ++ MEY GG+L FE C E R + S
Sbjct: 77 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCG---LKEGPIRTLLSDISS 133
Query: 110 GVSYCHSMQICHRDLKLENTLLDGSTAPRV-KICDFGYSKSSVLHSQPKSTVGTPAYIAP 168
+ Y H +I HRDLK EN +L + KI D GY+K VGT Y+AP
Sbjct: 134 ALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAP 193
Query: 169 EVLTKKEYDGKIADVWSCGVTLYVMLVGAYPF 200
E+L +K+Y + D WS G + + G PF
Sbjct: 194 ELLEQKKYTVTV-DYWSFGTLAFECITGFRPF 224
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 101/201 (50%), Gaps = 26/201 (12%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR----EIMNHRSLKHPNIVRFKE 65
+G G FG A V + T E++ +K + R DE QR E+ R L+HPN+++F
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIR---FDEETQRTFLKEVKVMRCLEHPNVLKFIG 74
Query: 66 VLLTPTHLAIVMEYAAGGELFERICNA-GRFSEDEARFFFQQLISGVSYCHSMQICHRDL 124
VL L + EY GG L I + ++ + F + + SG++Y HSM I HRDL
Sbjct: 75 VLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDL 134
Query: 125 KLENTLLDGSTAPRVKICDFGYSKSSVLH-SQPK--------------STVGTPAYIAPE 169
N L+ + V + DFG ++ V +QP+ + VG P ++APE
Sbjct: 135 NSHNCLVRENK--NVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPE 192
Query: 170 VLTKKEYDGKIADVWSCGVTL 190
++ + YD K+ DV+S G+ L
Sbjct: 193 MINGRSYDEKV-DVFSFGIVL 212
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 149/336 (44%), Gaps = 52/336 (15%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + +GSG +G D T +AVK + R + H +R E+ + +KH
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V L ++ + G +L I + ++D +F Q++ G+ Y
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCAKLTDDHVQFLIYQILRGLKY 136
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVL 171
HS I HRDLK N ++ +KI DFG ++ H+ + T V T Y APE++
Sbjct: 137 IHSADIIHRDLKPSNLAVNEDC--ELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 190
Query: 172 TKKEYDGKIADVWSCGVTLYVMLVG--AYPFED------------------------PED 205
+ + D+WS G + +L G +P D E
Sbjct: 191 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 250
Query: 206 PKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLR--- 262
+N+ +++ ++ ++++ ++ + LL ++ V +S+KRIT + H +F +
Sbjct: 251 ARNYIQSLAQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 309
Query: 263 --NLPIELTEGGSWQSHDV---NNPSQSLEEVLSLI 293
+ P+ S++S D+ S + +EV+S +
Sbjct: 310 PDDEPVADPYDQSFESRDLLIDEWKSLTYDEVISFV 345
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 147/334 (44%), Gaps = 48/334 (14%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + +GSG +G D T +AVK + R + H +R E+ + +KH
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 101
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V L ++ + G +L I + ++D +F Q++ G+ Y
Sbjct: 102 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKY 160
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTK 173
HS I HRDLK N ++ +KI DFG ++ + + V T Y APE++
Sbjct: 161 IHSADIIHRDLKPSNLAVNEDC--ELKILDFGLARHT--DDEMXGXVATRWYRAPEIMLN 216
Query: 174 KEYDGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPK 207
+ + D+WS G + +L G +P D E +
Sbjct: 217 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 276
Query: 208 NFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLR----- 262
N+ +++ ++ ++++ ++ + LL ++ V +S+KRIT + H +F +
Sbjct: 277 NYIQSLAQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 335
Query: 263 NLPIELTEGGSWQSHDV---NNPSQSLEEVLSLI 293
+ P+ S++S D+ S + +EV+S +
Sbjct: 336 DEPVADPYDQSFESRDLLIDEWKSLTYDEVISFV 369
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 149/336 (44%), Gaps = 52/336 (15%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + +GSG +G D T +AVK + R + H +R E+ + +KH
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 101
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V L ++ + G +L I + ++D +F Q++ G+ Y
Sbjct: 102 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKY 160
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVL 171
HS I HRDLK N ++ +KI DFG ++ H+ + T V T Y APE++
Sbjct: 161 IHSADIIHRDLKPSNLAVNEDC--ELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 214
Query: 172 TKKEYDGKIADVWSCGVTLYVMLVG--AYPFED------------------------PED 205
+ + D+WS G + +L G +P D E
Sbjct: 215 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 274
Query: 206 PKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLR--- 262
+N+ +++ ++ ++++ ++ + LL ++ V +S+KRIT + H +F +
Sbjct: 275 ARNYIQSLAQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 333
Query: 263 --NLPIELTEGGSWQSHDV---NNPSQSLEEVLSLI 293
+ P+ S++S D+ S + +EV+S +
Sbjct: 334 PDDEPVADPYDQSFESRDLLIDEWKSLTYDEVISFV 369
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 149/336 (44%), Gaps = 52/336 (15%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + +GSG +G D T +AVK + R + H +R E+ + +KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V L ++ + G +L I + ++D +F Q++ G+ Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVL 171
HS I HRDLK N ++ +KI DFG ++ H+ + T V T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDC--ELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 194
Query: 172 TKKEYDGKIADVWSCGVTLYVMLVG--AYPFED------------------------PED 205
+ + D+WS G + +L G +P D E
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 206 PKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLR--- 262
+N+ +++ ++ ++++ ++ + LL ++ V +S+KRIT + H +F +
Sbjct: 255 ARNYIQSLAQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 263 --NLPIELTEGGSWQSHDV---NNPSQSLEEVLSLI 293
+ P+ S++S D+ S + +EV+S +
Sbjct: 314 PDDEPVADPYDQSFESRDLLIDEWKSLTYDEVISFV 349
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 149/336 (44%), Gaps = 52/336 (15%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + +GSG +G D T +AVK + R + H +R E+ + +KH
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V L ++ + G +L I + ++D +F Q++ G+ Y
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKY 136
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVL 171
HS I HRDLK N ++ +KI DFG ++ H+ + T V T Y APE++
Sbjct: 137 IHSADIIHRDLKPSNLAVNEDC--ELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 190
Query: 172 TKKEYDGKIADVWSCGVTLYVMLVG--AYPFED------------------------PED 205
+ + D+WS G + +L G +P D E
Sbjct: 191 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 250
Query: 206 PKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLR--- 262
+N+ +++ ++ ++++ ++ + LL ++ V +S+KRIT + H +F +
Sbjct: 251 ARNYIQSLAQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 309
Query: 263 --NLPIELTEGGSWQSHDV---NNPSQSLEEVLSLI 293
+ P+ S++S D+ S + +EV+S +
Sbjct: 310 PDDEPVADPYDQSFESRDLLIDEWKSLTYDEVISFV 345
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 149/336 (44%), Gaps = 52/336 (15%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + +GSG +G D T +AVK + R + H +R E+ + +KH
Sbjct: 41 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 100
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V L ++ + G +L I + ++D +F Q++ G+ Y
Sbjct: 101 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKY 159
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVL 171
HS I HRDLK N ++ +KI DFG ++ H+ + T V T Y APE++
Sbjct: 160 IHSADIIHRDLKPSNLAVNEDC--ELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 213
Query: 172 TKKEYDGKIADVWSCGVTLYVMLVG--AYPFED------------------------PED 205
+ + D+WS G + +L G +P D E
Sbjct: 214 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 273
Query: 206 PKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLR--- 262
+N+ +++ ++ ++++ ++ + LL ++ V +S+KRIT + H +F +
Sbjct: 274 ARNYIQSLAQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 332
Query: 263 --NLPIELTEGGSWQSHDV---NNPSQSLEEVLSLI 293
+ P+ S++S D+ S + +EV+S +
Sbjct: 333 PDDEPVADPYDQSFESRDLLIDEWKSLTYDEVISFV 368
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 150/336 (44%), Gaps = 52/336 (15%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + +GSG +G D T +AVK + R + H +R E+ + +KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V L ++ + G +L I + ++D +F Q++ G+ Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVL 171
HS I HRDLK N ++ +KI DFG ++ H+ + T V T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDC--ELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 194
Query: 172 TKKEYDGKIADVWSCGVTLYVMLVG--AYPFED------------------------PED 205
+ + D+WS G + +L G +P D E
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 206 PKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLR--- 262
+N+ +++ ++ ++++ ++ + LL ++ V +S+KRIT + H +F +
Sbjct: 255 ARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 263 --NLPIELTEGGSWQSHDV---NNPSQSLEEVLSLI 293
+ P+ + S++S D+ S + +EV+S +
Sbjct: 314 PDDEPVADPQDQSFESRDLLIDEWKSLTYDEVISFV 349
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 149/336 (44%), Gaps = 52/336 (15%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + +GSG +G D T +AVK + R + H +R E+ + +KH
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V L ++ + G +L I + ++D +F Q++ G+ Y
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKY 146
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVL 171
HS I HRDLK N ++ +KI DFG ++ H+ + T V T Y APE++
Sbjct: 147 IHSADIIHRDLKPSNLAVNEDC--ELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 200
Query: 172 TKKEYDGKIADVWSCGVTLYVMLVG--AYPFED------------------------PED 205
+ + D+WS G + +L G +P D E
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 260
Query: 206 PKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLR--- 262
+N+ +++ ++ ++++ ++ + LL ++ V +S+KRIT + H +F +
Sbjct: 261 ARNYIQSLAQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 319
Query: 263 --NLPIELTEGGSWQSHDV---NNPSQSLEEVLSLI 293
+ P+ S++S D+ S + +EV+S +
Sbjct: 320 PDDEPVADPYDQSFESRDLLIDEWKSLTYDEVISFV 355
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 149/336 (44%), Gaps = 52/336 (15%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + +GSG +G D T +AVK + R + H +R E+ + +KH
Sbjct: 32 ERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 91
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V L ++ + G +L I + ++D +F Q++ G+ Y
Sbjct: 92 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKY 150
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVL 171
HS I HRDLK N ++ +KI DFG ++ H+ + T V T Y APE++
Sbjct: 151 IHSADIIHRDLKPSNLAVNEDC--ELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 204
Query: 172 TKKEYDGKIADVWSCGVTLYVMLVG--AYPFED------------------------PED 205
+ + D+WS G + +L G +P D E
Sbjct: 205 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 264
Query: 206 PKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLR--- 262
+N+ +++ ++ ++++ ++ + LL ++ V +S+KRIT + H +F +
Sbjct: 265 ARNYIQSLAQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 323
Query: 263 --NLPIELTEGGSWQSHDV---NNPSQSLEEVLSLI 293
+ P+ S++S D+ S + +EV+S +
Sbjct: 324 PDDEPVADPYDQSFESRDLLIDEWKSLTYDEVISFV 359
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 147/334 (44%), Gaps = 48/334 (14%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + +GSG +G D T +AVK + R + H +R E+ + +KH
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V L ++ + G +L I + ++D +F Q++ G+ Y
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKY 136
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTK 173
HS I HRDLK N ++ +KI DFG ++ + + V T Y APE++
Sbjct: 137 IHSADIIHRDLKPSNLAVNEDC--ELKILDFGLARHT--DDEMAGFVATRWYRAPEIMLN 192
Query: 174 KEYDGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPK 207
+ + D+WS G + +L G +P D E +
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 252
Query: 208 NFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLR----- 262
N+ +++ ++ ++++ ++ + LL ++ V +S+KRIT + H +F +
Sbjct: 253 NYIQSLAQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 311
Query: 263 NLPIELTEGGSWQSHDV---NNPSQSLEEVLSLI 293
+ P+ S++S D+ S + +EV+S +
Sbjct: 312 DEPVADPYDQSFESRDLLIDEWKSLTYDEVISFV 345
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 99/203 (48%), Gaps = 10/203 (4%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQ----REIMNHRSLK 56
++RY + +G G +G D T E +A+K I R + +E V RE+ + L+
Sbjct: 33 IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRI-RLEHEEEGVPGTAIREVSLLKELQ 91
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
H NI+ K V+ L ++ EYA +L + + S + F QLI+GV++CHS
Sbjct: 92 HRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHS 150
Query: 117 MQICHRDLKLENTLL---DGSTAPRVKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLT 172
+ HRDLK +N LL D S P +KI DFG +++ + Q + T Y PE+L
Sbjct: 151 RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILL 210
Query: 173 KKEYDGKIADVWSCGVTLYVMLV 195
+ D+WS ML+
Sbjct: 211 GSRHYSTSVDIWSIACIWAEMLM 233
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 147/334 (44%), Gaps = 48/334 (14%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + +GSG +G D T +AVK + R + H +R E+ + +KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V L ++ + G +L I + ++D +F Q++ G+ Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTK 173
HS I HRDLK N ++ +KI DFG ++ + + V T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDC--ELKILDFGLARHT--DDEMAGFVATRWYRAPEIMLN 196
Query: 174 KEYDGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPK 207
+ + D+WS G + +L G +P D E +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 208 NFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLR----- 262
N+ +++ ++ ++++ ++ + LL ++ V +S+KRIT + H +F +
Sbjct: 257 NYIQSLAQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
Query: 263 NLPIELTEGGSWQSHDV---NNPSQSLEEVLSLI 293
+ P+ S++S D+ S + +EV+S +
Sbjct: 316 DEPVADPYDQSFESRDLLIDEWKSLTYDEVISFV 349
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 150/336 (44%), Gaps = 52/336 (15%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + +GSG +G D T +AVK + R + H +R E+ + +KH
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V L ++ + G +L I + ++D +F Q++ G+ Y
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKY 146
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVL 171
HS I HRDLK N ++ + +KI DFG ++ H+ + T V T Y APE++
Sbjct: 147 IHSADIIHRDLKPSNLAVNEDS--ELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 200
Query: 172 TKKEYDGKIADVWSCGVTLYVMLVG--AYPFED------------------------PED 205
+ + D+WS G + +L G +P D E
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 260
Query: 206 PKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLR--- 262
+N+ +++ ++ ++++ ++ + LL ++ V +S+KRIT + H +F +
Sbjct: 261 ARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 319
Query: 263 --NLPIELTEGGSWQSHDV---NNPSQSLEEVLSLI 293
+ P+ S++S D+ S + +EV+S +
Sbjct: 320 PDDEPVADPYDQSFESRDLLIDEWKSLTYDEVISFV 355
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 150/336 (44%), Gaps = 52/336 (15%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + +GSG +G D T +AVK + R + H +R E+ + +KH
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V L ++ + G +L I + ++D +F Q++ G+ Y
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKY 142
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVL 171
HS I HRDLK N ++ + +KI DFG ++ H+ + T V T Y APE++
Sbjct: 143 IHSADIIHRDLKPSNLAVNEDS--ELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 196
Query: 172 TKKEYDGKIADVWSCGVTLYVMLVG--AYPFED------------------------PED 205
+ + D+WS G + +L G +P D E
Sbjct: 197 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 256
Query: 206 PKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLR--- 262
+N+ +++ ++ ++++ ++ + LL ++ V +S+KRIT + H +F +
Sbjct: 257 ARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 315
Query: 263 --NLPIELTEGGSWQSHDV---NNPSQSLEEVLSLI 293
+ P+ S++S D+ S + +EV+S +
Sbjct: 316 PDDEPVADPYDQSFESRDLLIDEWKSLTYDEVISFV 351
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 149/336 (44%), Gaps = 52/336 (15%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + +GSG +G D T +AVK + R + H +R E+ + +KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V L ++ + G +L I + ++D +F Q++ G+ Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVL 171
HS I HRDLK N ++ +KI DFG ++ H+ + T V T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDC--ELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 194
Query: 172 TKKEYDGKIADVWSCGVTLYVMLVG--AYPFED------------------------PED 205
+ + D+WS G + +L G +P D E
Sbjct: 195 LNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 206 PKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLR--- 262
+N+ +++ ++ ++++ ++ + LL ++ V +S+KRIT + H +F +
Sbjct: 255 ARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 263 --NLPIELTEGGSWQSHDV---NNPSQSLEEVLSLI 293
+ P+ S++S D+ S + +EV+S +
Sbjct: 314 PDDEPVADPYDQSFESRDLLIDEWKSLTYDEVISFV 349
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 149/336 (44%), Gaps = 52/336 (15%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + +GSG +G D T +AVK + R + H +R E+ + +KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V L ++ + G +L I + ++D +F Q++ G+ Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVL 171
HS I HRDLK N ++ +KI DFG ++ H+ + T V T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDC--ELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 194
Query: 172 TKKEYDGKIADVWSCGVTLYVMLVG--AYPFED------------------------PED 205
+ + D+WS G + +L G +P D E
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 206 PKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLR--- 262
+N+ +++ ++ ++++ ++ + LL ++ V +S+KRIT + H +F +
Sbjct: 255 ARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 263 --NLPIELTEGGSWQSHDV---NNPSQSLEEVLSLI 293
+ P+ S++S D+ S + +EV+S +
Sbjct: 314 PDDEPVADPRDQSFESRDLLIDEWKSLTYDEVISFV 349
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 149/336 (44%), Gaps = 52/336 (15%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + IGSG +G D T +AVK + R + H +R E+ + +KH
Sbjct: 27 ERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V L ++ + G +L I + ++D +F Q++ G+ Y
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKY 145
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVL 171
HS I HRDLK N ++ +KI DFG ++ H+ + T V T Y APE++
Sbjct: 146 IHSADIIHRDLKPSNLAVNEDX--ELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 199
Query: 172 TKKEYDGKIADVWSCGVTLYVMLVG--AYPFED------------------------PED 205
+ + D+WS G + +L G +P D E
Sbjct: 200 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 259
Query: 206 PKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLR--- 262
+N+ +++ ++ ++++ ++ + LL ++ V +S+KRIT + H +F +
Sbjct: 260 ARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 318
Query: 263 --NLPIELTEGGSWQSHDV---NNPSQSLEEVLSLI 293
+ P+ S++S D+ S + +EV+S +
Sbjct: 319 PDDEPVADPYDQSFESRDLLIDEWKSLTYDEVISFV 354
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 147/334 (44%), Gaps = 48/334 (14%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + +GSG +G D T +AVK + R + H +R E+ + +KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V L ++ + G +L I + ++D +F Q++ G+ Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTK 173
HS I HRDLK N ++ +KI DFG ++ + + V T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDC--ELKILDFGLARHT--DDEMAGFVATRWYRAPEIMLN 196
Query: 174 KEYDGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPK 207
+ + D+WS G + +L G +P D E +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 208 NFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLR----- 262
N+ +++ ++ ++++ ++ + LL ++ V +S+KRIT + H +F +
Sbjct: 257 NYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
Query: 263 NLPIELTEGGSWQSHDV---NNPSQSLEEVLSLI 293
+ P+ S++S D+ S + +EV+S +
Sbjct: 316 DEPVADPYDQSFESRDLLIDEWKSLTYDEVISFV 349
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 149/336 (44%), Gaps = 52/336 (15%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + +GSG +G D T +AVK + R + H +R E+ + +KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V L ++ + G +L I + ++D +F Q++ G+ Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVL 171
HS I HRDLK N ++ +KI DFG ++ H+ + T V T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDC--ELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 194
Query: 172 TKKEYDGKIADVWSCGVTLYVMLVG--AYPFED------------------------PED 205
+ + D+WS G + +L G +P D E
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 206 PKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLR--- 262
+N+ +++ ++ ++++ ++ + LL ++ V +S+KRIT + H +F +
Sbjct: 255 ARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 263 --NLPIELTEGGSWQSHDV---NNPSQSLEEVLSLI 293
+ P+ S++S D+ S + +EV+S +
Sbjct: 314 PDDEPVADPTDQSFESRDLLIDEWKSLTYDEVISFV 349
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 147/334 (44%), Gaps = 48/334 (14%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + +GSG +G D T +AVK + R + H +R E+ + +KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V L ++ + G +L I + ++D +F Q++ G+ Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTK 173
HS I HRDLK N ++ +KI DFG ++ + + V T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDC--ELKILDFGLARHT--DDEMTGXVATRWYRAPEIMLN 196
Query: 174 KEYDGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPK 207
+ + D+WS G + +L G +P D E +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 208 NFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLR----- 262
N+ +++ ++ ++++ ++ + LL ++ V +S+KRIT + H +F +
Sbjct: 257 NYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
Query: 263 NLPIELTEGGSWQSHDV---NNPSQSLEEVLSLI 293
+ P+ S++S D+ S + +EV+S +
Sbjct: 316 DEPVADPYDQSFESRDLLIDEWKSLTYDEVISFV 349
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 149/336 (44%), Gaps = 52/336 (15%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + +GSG +G D T +AVK + R + H +R E+ + +KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V L ++ + G +L I + ++D +F Q++ G+ Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKXQKLTDDHVQFLIYQILRGLKY 140
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVL 171
HS I HRDLK N ++ +KI DFG ++ H+ + T V T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDX--ELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 194
Query: 172 TKKEYDGKIADVWSCGVTLYVMLVG--AYPFED------------------------PED 205
+ + D+WS G + +L G +P D E
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 206 PKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLR--- 262
+N+ +++ ++ ++++ ++ + LL ++ V +S+KRIT + H +F +
Sbjct: 255 ARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 263 --NLPIELTEGGSWQSHDV---NNPSQSLEEVLSLI 293
+ P+ S++S D+ S + +EV+S +
Sbjct: 314 PDDEPVADPYDQSFESRDLLIDEWKSLTYDEVISFV 349
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 132/295 (44%), Gaps = 44/295 (14%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + +GSG +G D T +AVK + R + H +R E+ + +KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V L ++ + G +L I + + ++D +F Q++ G+ Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKSQKLTDDHVQFLIYQILRGLKY 140
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVL 171
HS I HRDLK N ++ + +KI DFG + H+ + T V T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDS--ELKILDFGLCR----HTDDEMTGYVATRWYRAPEIM 194
Query: 172 TKKEYDGKIADVWSCGVTLYVMLVG--AYPFED------------------------PED 205
+ + D+WS G + +L G +P D E
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 206 PKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWF 260
+N+ +++ ++ ++++ ++ + LL ++ V +S+KRIT + H +F
Sbjct: 255 ARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 149/336 (44%), Gaps = 52/336 (15%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + +GSG +G D T +AVK + R + H +R E+ + +KH
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V L ++ + G +L I + ++D +F Q++ G+ Y
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKY 136
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVL 171
HS I HRDLK N ++ +KI DFG ++ H+ + T V T Y APE++
Sbjct: 137 IHSADIIHRDLKPSNLAVNEDC--ELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 190
Query: 172 TKKEYDGKIADVWSCGVTLYVMLVG--AYPFED------------------------PED 205
+ + D+WS G + +L G +P D E
Sbjct: 191 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 250
Query: 206 PKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLR--- 262
+N+ +++ ++ ++++ ++ + LL ++ V +S+KRIT + H +F +
Sbjct: 251 ARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 309
Query: 263 --NLPIELTEGGSWQSHDV---NNPSQSLEEVLSLI 293
+ P+ S++S D+ S + +EV+S +
Sbjct: 310 PDDEPVADPYDQSFESRDLLIDEWKSLTYDEVISFV 345
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 149/336 (44%), Gaps = 52/336 (15%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + +GSG +G D T +AVK + R + H +R E+ + +KH
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 101
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V L ++ + G +L I + ++D +F Q++ G+ Y
Sbjct: 102 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKY 160
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVL 171
HS I HRDLK N ++ +KI DFG ++ H+ + T V T Y APE++
Sbjct: 161 IHSADIIHRDLKPSNLAVNEDC--ELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 214
Query: 172 TKKEYDGKIADVWSCGVTLYVMLVG--AYPFED------------------------PED 205
+ + D+WS G + +L G +P D E
Sbjct: 215 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 274
Query: 206 PKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLR--- 262
+N+ +++ ++ ++++ ++ + LL ++ V +S+KRIT + H +F +
Sbjct: 275 ARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 333
Query: 263 --NLPIELTEGGSWQSHDV---NNPSQSLEEVLSLI 293
+ P+ S++S D+ S + +EV+S +
Sbjct: 334 PDDEPVADPYDQSFESRDLLIDEWKSLTYDEVISFV 369
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 149/336 (44%), Gaps = 52/336 (15%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + +GSG +G D T +AVK + R + H +R E+ + +KH
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V L ++ + G +L I + ++D +F Q++ G+ Y
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKY 142
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVL 171
HS I HRDLK N ++ +KI DFG ++ H+ + T V T Y APE++
Sbjct: 143 IHSADIIHRDLKPSNLAVNEDC--ELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 196
Query: 172 TKKEYDGKIADVWSCGVTLYVMLVG--AYPFED------------------------PED 205
+ + D+WS G + +L G +P D E
Sbjct: 197 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 256
Query: 206 PKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLR--- 262
+N+ +++ ++ ++++ ++ + LL ++ V +S+KRIT + H +F +
Sbjct: 257 ARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 315
Query: 263 --NLPIELTEGGSWQSHDV---NNPSQSLEEVLSLI 293
+ P+ S++S D+ S + +EV+S +
Sbjct: 316 PDDEPVADPYDQSFESRDLLIDEWKSLTYDEVISFV 351
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 149/336 (44%), Gaps = 52/336 (15%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + +GSG +G D T +AVK + R + H +R E+ + +KH
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V L ++ + G +L I + ++D +F Q++ G+ Y
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKY 142
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVL 171
HS I HRDLK N ++ +KI DFG ++ H+ + T V T Y APE++
Sbjct: 143 IHSADIIHRDLKPSNLAVNEDC--ELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 196
Query: 172 TKKEYDGKIADVWSCGVTLYVMLVG--AYPFED------------------------PED 205
+ + D+WS G + +L G +P D E
Sbjct: 197 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 256
Query: 206 PKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLR--- 262
+N+ +++ ++ ++++ ++ + LL ++ V +S+KRIT + H +F +
Sbjct: 257 ARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 315
Query: 263 --NLPIELTEGGSWQSHDV---NNPSQSLEEVLSLI 293
+ P+ S++S D+ S + +EV+S +
Sbjct: 316 PDDEPVADPYDQSFESRDLLIDEWKSLTYDEVISFV 351
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 149/336 (44%), Gaps = 52/336 (15%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + +GSG +G D T +AVK + R + H +R E+ + +KH
Sbjct: 41 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 100
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V L ++ + G +L I + ++D +F Q++ G+ Y
Sbjct: 101 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKY 159
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVL 171
HS I HRDLK N ++ +KI DFG ++ H+ + T V T Y APE++
Sbjct: 160 IHSADIIHRDLKPSNLAVNEDC--ELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 213
Query: 172 TKKEYDGKIADVWSCGVTLYVMLVG--AYPFED------------------------PED 205
+ + D+WS G + +L G +P D E
Sbjct: 214 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 273
Query: 206 PKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLR--- 262
+N+ +++ ++ ++++ ++ + LL ++ V +S+KRIT + H +F +
Sbjct: 274 ARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 332
Query: 263 --NLPIELTEGGSWQSHDV---NNPSQSLEEVLSLI 293
+ P+ S++S D+ S + +EV+S +
Sbjct: 333 PDDEPVADPYDQSFESRDLLIDEWKSLTYDEVISFV 368
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 149/336 (44%), Gaps = 52/336 (15%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + +GSG +G D T +AVK + R + H +R E+ + +KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V L ++ + G +L I + ++D +F Q++ G+ Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVL 171
HS I HRDLK N ++ +KI DFG ++ H+ + T V T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDC--ELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 194
Query: 172 TKKEYDGKIADVWSCGVTLYVMLVG--AYPFED------------------------PED 205
+ + D+WS G + +L G +P D E
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 206 PKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLR--- 262
+N+ +++ ++ ++++ ++ + LL ++ V +S+KRIT + H +F +
Sbjct: 255 ARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 263 --NLPIELTEGGSWQSHDV---NNPSQSLEEVLSLI 293
+ P+ S++S D+ S + +EV+S +
Sbjct: 314 PDDEPVADPYDQSFESRDLLIDEWKSLTYDEVISFV 349
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 149/336 (44%), Gaps = 52/336 (15%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + +GSG +G D T +AVK + R + H +R E+ + +KH
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V L ++ + G +L I + ++D +F Q++ G+ Y
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKY 145
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVL 171
HS I HRDLK N ++ +KI DFG ++ H+ + T V T Y APE++
Sbjct: 146 IHSADIIHRDLKPSNLAVNEDC--ELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 199
Query: 172 TKKEYDGKIADVWSCGVTLYVMLVG--AYPFED------------------------PED 205
+ + D+WS G + +L G +P D E
Sbjct: 200 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 259
Query: 206 PKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLR--- 262
+N+ +++ ++ ++++ ++ + LL ++ V +S+KRIT + H +F +
Sbjct: 260 ARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 318
Query: 263 --NLPIELTEGGSWQSHDV---NNPSQSLEEVLSLI 293
+ P+ S++S D+ S + +EV+S +
Sbjct: 319 PDDEPVADPYDQSFESRDLLIDEWKSLTYDEVISFV 354
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 149/336 (44%), Gaps = 52/336 (15%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + +GSG +G D T +AVK + R + H +R E+ + +KH
Sbjct: 21 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 80
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V L ++ + G +L I + ++D +F Q++ G+ Y
Sbjct: 81 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKY 139
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVL 171
HS I HRDLK N ++ +KI DFG ++ H+ + T V T Y APE++
Sbjct: 140 IHSADIIHRDLKPSNLAVNEDC--ELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 193
Query: 172 TKKEYDGKIADVWSCGVTLYVMLVG--AYPFED------------------------PED 205
+ + D+WS G + +L G +P D E
Sbjct: 194 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 253
Query: 206 PKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLR--- 262
+N+ +++ ++ ++++ ++ + LL ++ V +S+KRIT + H +F +
Sbjct: 254 ARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 312
Query: 263 --NLPIELTEGGSWQSHDV---NNPSQSLEEVLSLI 293
+ P+ S++S D+ S + +EV+S +
Sbjct: 313 PDDEPVADPYDQSFESRDLLIDEWKSLTYDEVISFV 348
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 149/336 (44%), Gaps = 52/336 (15%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + +GSG +G D T +AVK + R + H +R E+ + +KH
Sbjct: 20 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 79
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V L ++ + G +L I + ++D +F Q++ G+ Y
Sbjct: 80 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKY 138
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVL 171
HS I HRDLK N ++ +KI DFG ++ H+ + T V T Y APE++
Sbjct: 139 IHSADIIHRDLKPSNLAVNEDC--ELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 192
Query: 172 TKKEYDGKIADVWSCGVTLYVMLVG--AYPFED------------------------PED 205
+ + D+WS G + +L G +P D E
Sbjct: 193 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 252
Query: 206 PKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLR--- 262
+N+ +++ ++ ++++ ++ + LL ++ V +S+KRIT + H +F +
Sbjct: 253 ARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 311
Query: 263 --NLPIELTEGGSWQSHDV---NNPSQSLEEVLSLI 293
+ P+ S++S D+ S + +EV+S +
Sbjct: 312 PDDEPVADPYDQSFESRDLLIDEWKSLTYDEVISFV 347
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 149/336 (44%), Gaps = 52/336 (15%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + +GSG +G D T +AVK + R + H +R E+ + +KH
Sbjct: 45 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 104
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V L ++ + G +L I + ++D +F Q++ G+ Y
Sbjct: 105 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKY 163
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVL 171
HS I HRDLK N ++ +KI DFG ++ H+ + T V T Y APE++
Sbjct: 164 IHSADIIHRDLKPSNLAVNEDC--ELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 217
Query: 172 TKKEYDGKIADVWSCGVTLYVMLVG--AYPFED------------------------PED 205
+ + D+WS G + +L G +P D E
Sbjct: 218 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 277
Query: 206 PKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLR--- 262
+N+ +++ ++ ++++ ++ + LL ++ V +S+KRIT + H +F +
Sbjct: 278 ARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 336
Query: 263 --NLPIELTEGGSWQSHDV---NNPSQSLEEVLSLI 293
+ P+ S++S D+ S + +EV+S +
Sbjct: 337 PDDEPVADPYDQSFESRDLLIDEWKSLTYDEVISFV 372
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 126/296 (42%), Gaps = 44/296 (14%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE--RGQKIDEHVQREIMNHRSLKHPNI 60
RY ++ IG G +G+ D + +A+K I Q + REI +H N+
Sbjct: 44 RYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENV 103
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGELFE----RICNAGRFSEDEARFFFQQLISGVSYCHS 116
+ +++L T A+ Y +L E ++ + + S D +F Q++ G+ Y HS
Sbjct: 104 IGIRDILRASTLEAMRDVYIVQ-DLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIHS 162
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSK-SSVLHSQP---KSTVGTPAYIAPEVLT 172
+ HRDLK N L++ T +KICDFG ++ + H V T Y APE++
Sbjct: 163 ANVLHRDLKPSNLLIN--TTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIML 220
Query: 173 KKEYDGKIADVWSCGVTLYVML------------------VGAYPFEDPED--------P 206
+ K D+WS G L ML +G ED
Sbjct: 221 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINMKA 280
Query: 207 KNFRKTIGRILSVHYS--FPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWF 260
+N+ +++ V ++ FP +L+ LL R+ N KRIT+ E HP+
Sbjct: 281 RNYLQSLPSKTKVAWAKLFPKSDSKALD---LLDRMLTFNPNKRITVEEALAHPYL 333
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 149/336 (44%), Gaps = 52/336 (15%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + +GSG +G D T +AVK + R + H +R E+ + +KH
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V L ++ + G +L I + ++D +F Q++ G+ Y
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKY 145
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVL 171
HS I HRDLK N ++ +KI DFG ++ H+ + T V T Y APE++
Sbjct: 146 IHSADIIHRDLKPSNLAVNEDX--ELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 199
Query: 172 TKKEYDGKIADVWSCGVTLYVMLVG--AYPFED------------------------PED 205
+ + D+WS G + +L G +P D E
Sbjct: 200 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 259
Query: 206 PKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLR--- 262
+N+ +++ ++ ++++ ++ + LL ++ V +S+KRIT + H +F +
Sbjct: 260 ARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 318
Query: 263 --NLPIELTEGGSWQSHDV---NNPSQSLEEVLSLI 293
+ P+ S++S D+ S + +EV+S +
Sbjct: 319 PDDEPVADPYDQSFESRDLLIDEWKSLTYDEVISFV 354
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 149/336 (44%), Gaps = 52/336 (15%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + +GSG +G D T +AVK + R + H +R E+ + +KH
Sbjct: 33 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 92
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V L ++ + G +L I + ++D +F Q++ G+ Y
Sbjct: 93 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKY 151
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVL 171
HS I HRDLK N ++ +KI DFG ++ H+ + T V T Y APE++
Sbjct: 152 IHSADIIHRDLKPSNLAVNEDX--ELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 205
Query: 172 TKKEYDGKIADVWSCGVTLYVMLVG--AYPFED------------------------PED 205
+ + D+WS G + +L G +P D E
Sbjct: 206 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 265
Query: 206 PKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLR--- 262
+N+ +++ ++ ++++ ++ + LL ++ V +S+KRIT + H +F +
Sbjct: 266 ARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 324
Query: 263 --NLPIELTEGGSWQSHDV---NNPSQSLEEVLSLI 293
+ P+ S++S D+ S + +EV+S +
Sbjct: 325 PDDEPVADPYDQSFESRDLLIDEWKSLTYDEVISFV 360
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 149/336 (44%), Gaps = 52/336 (15%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + +GSG +G D T +AVK + R + H +R E+ + +KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V L ++ + G +L I + ++D +F Q++ G+ Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVL 171
HS I HRDLK N ++ +KI DFG ++ H+ + T V T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDC--ELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 194
Query: 172 TKKEYDGKIADVWSCGVTLYVMLVG--AYPFED------------------------PED 205
+ + D+WS G + +L G +P D E
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 206 PKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLR--- 262
+N+ +++ ++ ++++ ++ + LL ++ V +S+KRIT + H +F +
Sbjct: 255 ARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 263 --NLPIELTEGGSWQSHDV---NNPSQSLEEVLSLI 293
+ P+ S++S D+ S + +EV+S +
Sbjct: 314 PDDEPVADPYDQSFESRDLLIDEWKSLTYDEVISFV 349
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 149/336 (44%), Gaps = 52/336 (15%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + +GSG +G D T +AVK + R + H +R E+ + +KH
Sbjct: 19 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 78
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V L ++ + G +L I + ++D +F Q++ G+ Y
Sbjct: 79 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKY 137
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVL 171
HS I HRDLK N ++ +KI DFG ++ H+ + T V T Y APE++
Sbjct: 138 IHSADIIHRDLKPSNLAVNEDC--ELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 191
Query: 172 TKKEYDGKIADVWSCGVTLYVMLVG--AYPFED------------------------PED 205
+ + D+WS G + +L G +P D E
Sbjct: 192 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 251
Query: 206 PKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLR--- 262
+N+ +++ ++ ++++ ++ + LL ++ V +S+KRIT + H +F +
Sbjct: 252 ARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 310
Query: 263 --NLPIELTEGGSWQSHDV---NNPSQSLEEVLSLI 293
+ P+ S++S D+ S + +EV+S +
Sbjct: 311 PDDEPVADPYDQSFESRDLLIDEWKSLTYDEVISFV 346
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 149/336 (44%), Gaps = 52/336 (15%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + +GSG +G D T +AVK + R + H +R E+ + +KH
Sbjct: 33 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 92
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V L ++ + G +L I + ++D +F Q++ G+ Y
Sbjct: 93 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKY 151
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVL 171
HS I HRDLK N ++ +KI DFG ++ H+ + T V T Y APE++
Sbjct: 152 IHSADIIHRDLKPSNLAVNEDC--ELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 205
Query: 172 TKKEYDGKIADVWSCGVTLYVMLVG--AYPFED------------------------PED 205
+ + D+WS G + +L G +P D E
Sbjct: 206 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 265
Query: 206 PKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLR--- 262
+N+ +++ ++ ++++ ++ + LL ++ V +S+KRIT + H +F +
Sbjct: 266 ARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 324
Query: 263 --NLPIELTEGGSWQSHDV---NNPSQSLEEVLSLI 293
+ P+ S++S D+ S + +EV+S +
Sbjct: 325 PDDEPVADPYDQSFESRDLLIDEWKSLTYDEVISFV 360
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 149/336 (44%), Gaps = 52/336 (15%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + +GSG +G D T +AVK + R + H +R E+ + +KH
Sbjct: 19 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 78
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V L ++ + G +L I + ++D +F Q++ G+ Y
Sbjct: 79 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKY 137
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVL 171
HS I HRDLK N ++ +KI DFG ++ H+ + T V T Y APE++
Sbjct: 138 IHSADIIHRDLKPSNLAVNEDC--ELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 191
Query: 172 TKKEYDGKIADVWSCGVTLYVMLVG--AYPFED------------------------PED 205
+ + D+WS G + +L G +P D E
Sbjct: 192 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 251
Query: 206 PKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLR--- 262
+N+ +++ ++ ++++ ++ + LL ++ V +S+KRIT + H +F +
Sbjct: 252 ARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 310
Query: 263 --NLPIELTEGGSWQSHDV---NNPSQSLEEVLSLI 293
+ P+ S++S D+ S + +EV+S +
Sbjct: 311 PDDEPVADPYDQSFESRDLLIDEWKSLTYDEVISFV 346
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 149/336 (44%), Gaps = 52/336 (15%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + +GSG +G D T +AVK + R + H +R E+ + +KH
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 93
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V L ++ + G +L I + ++D +F Q++ G+ Y
Sbjct: 94 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKY 152
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVL 171
HS I HRDLK N ++ +KI DFG ++ H+ + T V T Y APE++
Sbjct: 153 IHSADIIHRDLKPSNLAVNEDC--ELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 206
Query: 172 TKKEYDGKIADVWSCGVTLYVMLVG--AYPFED------------------------PED 205
+ + D+WS G + +L G +P D E
Sbjct: 207 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 266
Query: 206 PKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLR--- 262
+N+ +++ ++ ++++ ++ + LL ++ V +S+KRIT + H +F +
Sbjct: 267 ARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 325
Query: 263 --NLPIELTEGGSWQSHDV---NNPSQSLEEVLSLI 293
+ P+ S++S D+ S + +EV+S +
Sbjct: 326 PDDEPVADPYDQSFESRDLLIDEWKSLTYDEVISFV 361
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 149/336 (44%), Gaps = 52/336 (15%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + +GSG +G D T +AVK + R + H +R E+ + +KH
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 93
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V L ++ + G +L I + ++D +F Q++ G+ Y
Sbjct: 94 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKY 152
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVL 171
HS I HRDLK N ++ +KI DFG ++ H+ + T V T Y APE++
Sbjct: 153 IHSADIIHRDLKPSNLAVNEDC--ELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 206
Query: 172 TKKEYDGKIADVWSCGVTLYVMLVG--AYPFED------------------------PED 205
+ + D+WS G + +L G +P D E
Sbjct: 207 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 266
Query: 206 PKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLR--- 262
+N+ +++ ++ ++++ ++ + LL ++ V +S+KRIT + H +F +
Sbjct: 267 ARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 325
Query: 263 --NLPIELTEGGSWQSHDV---NNPSQSLEEVLSLI 293
+ P+ S++S D+ S + +EV+S +
Sbjct: 326 PDDEPVADPYDQSFESRDLLIDEWKSLTYDEVISFV 361
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 149/336 (44%), Gaps = 52/336 (15%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + +GSG +G D T +AVK + R + H +R E+ + +KH
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V L ++ + G +L I + ++D +F Q++ G+ Y
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKY 146
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVL 171
HS I HRDLK N ++ +KI DFG ++ H+ + T V T Y APE++
Sbjct: 147 IHSADIIHRDLKPSNLAVNEDC--ELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 200
Query: 172 TKKEYDGKIADVWSCGVTLYVMLVG--AYPFED------------------------PED 205
+ + D+WS G + +L G +P D E
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 260
Query: 206 PKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLR--- 262
+N+ +++ ++ ++++ ++ + LL ++ V +S+KRIT + H +F +
Sbjct: 261 ARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 319
Query: 263 --NLPIELTEGGSWQSHDV---NNPSQSLEEVLSLI 293
+ P+ S++S D+ S + +EV+S +
Sbjct: 320 PDDEPVADPYDQSFESRDLLIDEWKSLTYDEVISFV 355
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 149/336 (44%), Gaps = 52/336 (15%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + +GSG +G D T +AVK + R + H +R E+ + +KH
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V L ++ + G +L I + ++D +F Q++ G+ Y
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKY 142
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVL 171
HS I HRDLK N ++ +KI DFG ++ H+ + T V T Y APE++
Sbjct: 143 IHSADIIHRDLKPSNLAVNEDC--ELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 196
Query: 172 TKKEYDGKIADVWSCGVTLYVMLVG--AYPFED------------------------PED 205
+ + D+WS G + +L G +P D E
Sbjct: 197 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 256
Query: 206 PKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLR--- 262
+N+ +++ ++ ++++ ++ + LL ++ V +S+KRIT + H +F +
Sbjct: 257 ARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 315
Query: 263 --NLPIELTEGGSWQSHDV---NNPSQSLEEVLSLI 293
+ P+ S++S D+ S + +EV+S +
Sbjct: 316 PDDEPVADPYDQSFESRDLLIDEWKSLTYDEVISFV 351
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 149/336 (44%), Gaps = 52/336 (15%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + +GSG +G D T +AVK + R + H +R E+ + +KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V L ++ + G +L I + ++D +F Q++ G+ Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVL 171
HS I HRDLK N ++ +KI DFG ++ H+ + T V T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDC--ELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 194
Query: 172 TKKEYDGKIADVWSCGVTLYVMLVG--AYPFED------------------------PED 205
+ + D+WS G + +L G +P D E
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 206 PKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLR--- 262
+N+ +++ ++ ++++ ++ + LL ++ V +S+KRIT + H +F +
Sbjct: 255 ARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 263 --NLPIELTEGGSWQSHDV---NNPSQSLEEVLSLI 293
+ P+ S++S D+ S + +EV+S +
Sbjct: 314 PDDEPVADPYDQSFESRDLLIDEWKSLTYDEVISFV 349
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 149/336 (44%), Gaps = 52/336 (15%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + +GSG +G D T +AVK + R + H +R E+ + +KH
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V L ++ + G +L I + ++D +F Q++ G+ Y
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKY 145
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVL 171
HS I HRDLK N ++ +KI DFG ++ H+ + T V T Y APE++
Sbjct: 146 IHSADIIHRDLKPSNLAVNEDC--ELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 199
Query: 172 TKKEYDGKIADVWSCGVTLYVMLVG--AYPFED------------------------PED 205
+ + D+WS G + +L G +P D E
Sbjct: 200 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 259
Query: 206 PKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLR--- 262
+N+ +++ ++ ++++ ++ + LL ++ V +S+KRIT + H +F +
Sbjct: 260 ARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 318
Query: 263 --NLPIELTEGGSWQSHDV---NNPSQSLEEVLSLI 293
+ P+ S++S D+ S + +EV+S +
Sbjct: 319 PDDEPVADPYDQSFESRDLLIDEWKSLTYDEVISFV 354
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 149/336 (44%), Gaps = 52/336 (15%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + +GSG +G D T +AVK + R + H +R E+ + +KH
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V L ++ + G +L I + ++D +F Q++ G+ Y
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKY 147
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVL 171
HS I HRDLK N ++ +KI DFG ++ H+ + T V T Y APE++
Sbjct: 148 IHSADIIHRDLKPSNLAVNEDC--ELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 201
Query: 172 TKKEYDGKIADVWSCGVTLYVMLVG--AYPFED------------------------PED 205
+ + D+WS G + +L G +P D E
Sbjct: 202 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 261
Query: 206 PKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLR--- 262
+N+ +++ ++ ++++ ++ + LL ++ V +S+KRIT + H +F +
Sbjct: 262 ARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 320
Query: 263 --NLPIELTEGGSWQSHDV---NNPSQSLEEVLSLI 293
+ P+ S++S D+ S + +EV+S +
Sbjct: 321 PDDEPVADPYDQSFESRDLLIDEWKSLTYDEVISFV 356
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 147/334 (44%), Gaps = 48/334 (14%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + +GSG +G D T +AVK + R + H +R E+ + +KH
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V L ++ + G +L I + ++D +F Q++ G+ Y
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKY 147
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTK 173
HS I HRDLK N ++ +KI DFG ++ + + V T Y APE++
Sbjct: 148 IHSADIIHRDLKPSNLAVNEDC--ELKILDFGLARHTA--DEMTGYVATRWYRAPEIMLN 203
Query: 174 KEYDGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPK 207
+ + D+WS G + +L G +P D E +
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 263
Query: 208 NFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLR----- 262
N+ +++ ++ ++++ ++ + LL ++ V +S+KRIT + H +F +
Sbjct: 264 NYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 322
Query: 263 NLPIELTEGGSWQSHDV---NNPSQSLEEVLSLI 293
+ P+ S++S D+ S + +EV+S +
Sbjct: 323 DEPVADPYDQSFESRDLLIDEWKSLTYDEVISFV 356
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 147/334 (44%), Gaps = 48/334 (14%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + +GSG +G D T +AVK + R + H +R E+ + +KH
Sbjct: 45 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 104
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V L ++ + G +L I + ++D +F Q++ G+ Y
Sbjct: 105 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKY 163
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTK 173
HS I HRDLK N ++ +KI DFG ++ + + V T Y APE++
Sbjct: 164 IHSADIIHRDLKPSNLAVNEDC--ELKILDFGLARHT--DDEMXGYVATRWYRAPEIMLN 219
Query: 174 KEYDGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPK 207
+ + D+WS G + +L G +P D E +
Sbjct: 220 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 279
Query: 208 NFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLR----- 262
N+ +++ ++ ++++ ++ + LL ++ V +S+KRIT + H +F +
Sbjct: 280 NYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 338
Query: 263 NLPIELTEGGSWQSHDV---NNPSQSLEEVLSLI 293
+ P+ S++S D+ S + +EV+S +
Sbjct: 339 DEPVADPYDQSFESRDLLIDEWKSLTYDEVISFV 372
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 149/336 (44%), Gaps = 52/336 (15%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + +GSG +G D T +AVK + R + H +R E+ + +KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V L ++ + G +L I + ++D +F Q++ G+ Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKXQKLTDDHVQFLIYQILRGLKY 140
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVL 171
HS I HRDLK N ++ +KI DFG ++ H+ + T V T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDC--ELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 194
Query: 172 TKKEYDGKIADVWSCGVTLYVMLVG--AYPFED------------------------PED 205
+ + D+WS G + +L G +P D E
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 206 PKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLR--- 262
+N+ +++ ++ ++++ ++ + LL ++ V +S+KRIT + H +F +
Sbjct: 255 ARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 263 --NLPIELTEGGSWQSHDV---NNPSQSLEEVLSLI 293
+ P+ S++S D+ S + +EV+S +
Sbjct: 314 PDDEPVADPYDQSFESRDLLIDEWKSLTYDEVISFV 349
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 149/336 (44%), Gaps = 52/336 (15%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + +GSG +G D T +AVK + R + H +R E+ + +KH
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V L ++ + G +L I + ++D +F Q++ G+ Y
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKY 146
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVL 171
HS I HRDLK N ++ +KI DFG ++ H+ + T V T Y APE++
Sbjct: 147 IHSADIIHRDLKPSNLAVNEDC--ELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 200
Query: 172 TKKEYDGKIADVWSCGVTLYVMLVG--AYPFED------------------------PED 205
+ + D+WS G + +L G +P D E
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 260
Query: 206 PKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLR--- 262
+N+ +++ ++ ++++ ++ + LL ++ V +S+KRIT + H +F +
Sbjct: 261 ARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 319
Query: 263 --NLPIELTEGGSWQSHDV---NNPSQSLEEVLSLI 293
+ P+ S++S D+ S + +EV+S +
Sbjct: 320 PDDEPVADPYDQSFESRDLLIDEWKSLTYDEVISFV 355
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 129/293 (44%), Gaps = 40/293 (13%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + +GSG +G D T +AVK + R + H +R E+ + +KH
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V L ++ + G +L I + ++D +F Q++ G+ Y
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKY 147
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTK 173
HS I HRDLK N ++ +KI DFG ++ + + V T Y APE++
Sbjct: 148 IHSADIIHRDLKPSNLAVNEDC--ELKILDFGLARHTA--DEMTGYVATRWYRAPEIMLN 203
Query: 174 KEYDGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPK 207
+ + D+WS G + +L G +P D E +
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 263
Query: 208 NFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWF 260
N+ +++ ++ ++++ ++ + LL ++ V +S+KRIT + H +F
Sbjct: 264 NYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 129/293 (44%), Gaps = 40/293 (13%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + +GSG +G D T +AVK + R + H +R E+ + +KH
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V L ++ + G +L I + ++D +F Q++ G+ Y
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKY 147
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTK 173
HS I HRDLK N ++ +KI DFG ++ + + V T Y APE++
Sbjct: 148 IHSADIIHRDLKPSNLAVNEDC--ELKILDFGLARHTA--DEMTGYVATRWYRAPEIMLN 203
Query: 174 KEYDGKIADVWSCGVTLYVMLVG--AYPFED------------------------PEDPK 207
+ + D+WS G + +L G +P D E +
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 263
Query: 208 NFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWF 260
N+ +++ ++ ++++ ++ + LL ++ V +S+KRIT + H +F
Sbjct: 264 NYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 149/336 (44%), Gaps = 52/336 (15%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + +GSG +G D T +AVK + R + H +R E+ + +KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V L ++ + G +L I + ++D +F Q++ G+ Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVL 171
HS I HRDLK N ++ +KI DFG ++ H+ + T V T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDC--ELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 194
Query: 172 TKKEYDGKIADVWSCGVTLYVMLVG--AYPFED------------------------PED 205
+ + D+WS G + +L G +P D E
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 206 PKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLR--- 262
+N+ +++ ++ ++++ ++ + LL ++ V +S+KRIT + H +F +
Sbjct: 255 ARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 263 --NLPIELTEGGSWQSHDV---NNPSQSLEEVLSLI 293
+ P+ S++S D+ S + +EV+S +
Sbjct: 314 PDDEPVADPFDQSFESRDLLIDEWKSLTYDEVISFV 349
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 112/225 (49%), Gaps = 23/225 (10%)
Query: 5 EIVKDIGSGNFGVAKLVR----DKWTRELLAVKFIERGQKIDEHV---QREIMNHRSLKH 57
+ ++ +G GNFG ++ R T E++AVK ++ +EH+ +REI +SL+H
Sbjct: 16 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQH 73
Query: 58 PNIVRFKEVLLTP--THLAIVMEYAAGGELFERI-CNAGRFSEDEARFFFQQLISGVSYC 114
NIV++K V + +L ++MEY G L + + +A R + + Q+ G+ Y
Sbjct: 74 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYL 133
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA-----YIAPE 169
+ + HRDL N L++ RVKI DFG +K + + V P + APE
Sbjct: 134 GTKRYIHRDLATRNILVENEN--RVKIGDFGLTK-VLPQDKEXXKVKEPGESPIFWYAPE 190
Query: 170 VLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIG 214
LT+ ++ +DVWS GV LY + + P P F + IG
Sbjct: 191 SLTESKF-SVASDVWSFGVVLYELFTYIEKSKSP--PAEFMRMIG 232
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 122/280 (43%), Gaps = 28/280 (10%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVK------FIERGQKIDEHVQREIMNHRSL 55
+ +EI+K IG G F +V+ K T ++ A+K ++RG+ +R+++ +
Sbjct: 61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDR 120
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAG-RFSEDEARFFFQQLISGVSYC 114
+ I + +L +VMEY GG+L + G R + ARF+ +++ +
Sbjct: 121 RW--ITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSV 178
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKS--TVGTPAYIAPEVLT 172
H + HRD+K +N LLD +++ DFG +S VGTP Y++PE+L
Sbjct: 179 HRLGYVHRDIKPDNILLD--RCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQ 236
Query: 173 KKEYDGKI------ADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSV--HYSFP 224
D W+ GV Y M G PF + +T G+I+ H S P
Sbjct: 237 AVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFY----ADSTAETYGKIVHYKEHLSLP 292
Query: 225 DYVR-VSLECKHLLSRIFVANSEK--RITIPEIKNHPWFL 261
V E + + R+ + R + + HP+F
Sbjct: 293 LVDEGVPEEARDFIQRLLCPPETRLGRGGAGDFRTHPFFF 332
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 124/287 (43%), Gaps = 37/287 (12%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRF 63
+E + +G G FG R+ A+K I ++ + E+M SL H +VR+
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRY 67
Query: 64 KEVLL-------------TPTHLAIVMEYAAGGELFERICNAGRFSE-DEARFFFQQLIS 109
L + L I MEY G L++ I + + DE F+Q++
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILE 127
Query: 110 GVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSS-------VLHSQP------ 156
+SY HS I HRDLK N +D S VKI DFG +K+ L SQ
Sbjct: 128 ALSYIHSQGIIHRDLKPMNIFIDESR--NVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 157 --KSTVGTPAYIAPEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIG 214
S +GT Y+A EVL + + D++S G+ + M+ YPF + N K +
Sbjct: 186 NLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YPFSTGMERVNILKKL- 241
Query: 215 RILSVHYSFPDYVRVSLECKHLLSRIFVANS-EKRITIPEIKNHPWF 260
R +S+ + PD+ ++ + + R+ + + KR + N W
Sbjct: 242 RSVSIEFP-PDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 127/294 (43%), Gaps = 42/294 (14%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + +GSG +G D + +AVK + R + H +R E+ + +KH
Sbjct: 51 ERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 110
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V T L ++ + G +L I + ++D +F Q++ G+ Y
Sbjct: 111 NVIGLLDVFTPATSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKY 169
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVL 171
HS I HRDLK N ++ +KI DFG ++ H+ + T V T Y APE++
Sbjct: 170 IHSADIIHRDLKPSNLAVNEDC--ELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 223
Query: 172 TKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRK-----------TIGRILS-- 218
+ D+WS G + +L G F + ++ I R+ S
Sbjct: 224 LNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVISRMPSHE 283
Query: 219 -----------VHYSFPD-YVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWF 260
+F D ++ + LL ++ V +++KRIT E HP+F
Sbjct: 284 ARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPYF 337
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 111/218 (50%), Gaps = 24/218 (11%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQ---REIMNHRSLKHP 58
E+ EI + IG G FG ++ +W E+ A++ I+ + ++ ++ RE+M +R +H
Sbjct: 33 EQLEIGELIGKGRFG--QVYHGRWHGEV-AIRLIDIERDNEDQLKAFKREVMAYRQTRHE 89
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSE-DEARFFFQQLISGVSYCHSM 117
N+V F ++P HLAI+ G L+ + +A + ++ R Q+++ G+ Y H+
Sbjct: 90 NVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAK 149
Query: 118 QICHRDLKLENTLLDGSTAPRVKICDFG-YSKSSVLHS-----QPKSTVGTPAYIAPEVL 171
I H+DLK +N D +V I DFG +S S VL + + + G ++APE++
Sbjct: 150 GILHKDLKSKNVFYDNG---KVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEII 206
Query: 172 TKKEYD--------GKIADVWSCGVTLYVMLVGAYPFE 201
+ D K +DV++ G Y + +PF+
Sbjct: 207 RQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFK 244
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 149/336 (44%), Gaps = 52/336 (15%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + +GSG +G D T +AVK + R + H +R E+ + +KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V L ++ + G +L I + ++D +F Q++ G+ Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVL 171
HS I HRDLK N ++ +KI D+G ++ H+ + T V T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDC--ELKILDYGLAR----HTDDEMTGYVATRWYRAPEIM 194
Query: 172 TKKEYDGKIADVWSCGVTLYVMLVG--AYPFED------------------------PED 205
+ + D+WS G + +L G +P D E
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 206 PKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLR--- 262
+N+ +++ ++ ++++ ++ + LL ++ V +S+KRIT + H +F +
Sbjct: 255 ARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 263 --NLPIELTEGGSWQSHDV---NNPSQSLEEVLSLI 293
+ P+ S++S D+ S + +EV+S +
Sbjct: 314 PDDEPVADPYDQSFESRDLLIDEWKSLTYDEVISFV 349
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 149/336 (44%), Gaps = 52/336 (15%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + +GSG +G D T +AVK + + + H +R E+ + +KH
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHE 93
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V L ++ + G +L I + ++D +F Q++ G+ Y
Sbjct: 94 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKY 152
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVL 171
HS I HRDLK N ++ +KI DFG ++ H+ + T V T Y APE++
Sbjct: 153 IHSADIIHRDLKPSNLAVNEDC--ELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 206
Query: 172 TKKEYDGKIADVWSCGVTLYVMLVG--AYPFED------------------------PED 205
+ + D+WS G + +L G +P D E
Sbjct: 207 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 266
Query: 206 PKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLR--- 262
+N+ +++ ++ ++++ ++ + LL ++ V +S+KRIT + H +F +
Sbjct: 267 ARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 325
Query: 263 --NLPIELTEGGSWQSHDV---NNPSQSLEEVLSLI 293
+ P+ S++S D+ S + +EV+S +
Sbjct: 326 PDDEPVADPYDQSFESRDLLIDEWKSLTYDEVISFV 361
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 120/250 (48%), Gaps = 22/250 (8%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQ---REIMNHRSLKHPNIVRFKEV 66
IGSG+FG + + KW ++ AVK ++ E Q E+ R +H NI+ F
Sbjct: 44 IGSGSFGT--VYKGKWHGDV-AVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMG- 99
Query: 67 LLTPTHLAIVMEYAAGGELFERI-CNAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLK 125
+T +LAIV ++ G L++ + +F + +Q G+ Y H+ I HRD+K
Sbjct: 100 YMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMK 159
Query: 126 LENTLL-DGSTAPRVKICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVLTKKEYD--GK 179
N L +G T VKI DFG + S Q + G+ ++APEV+ ++ +
Sbjct: 160 SNNIFLHEGLT---VKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSF 216
Query: 180 IADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSR 239
+DV+S G+ LY ++ G P+ + +GR Y+ PD ++ C + R
Sbjct: 217 QSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGR----GYASPDLSKLYKNCPKAMKR 272
Query: 240 IFVANSEKRI 249
+ VA+ K++
Sbjct: 273 L-VADCVKKV 281
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 127/302 (42%), Gaps = 45/302 (14%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKH 57
++RY+ +K IGSG G+ D +A+K + R + H +R E++ + + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFE-RICNAGRFSEDEAR--FFFQQLISGVSYC 114
NI+ V L + EL + +C + D R + Q++ G+ +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHL 142
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKK 174
HS I HRDLK N ++ +KI DFG ++++ V T Y APEV+
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPEVVTRYYRAPEVILGM 200
Query: 175 EYDGKIADVWSCGVTLYVMLVGA--YPFED----------------PEDPKNFRKTI--- 213
Y + D+WS G + M+ G +P D PE K + T+
Sbjct: 201 GYKENV-DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTY 259
Query: 214 --GRILSVHYSF----PDYV---------RVSLECKHLLSRIFVANSEKRITIPEIKNHP 258
R YSF PD + + + + LLS++ V ++ KRI++ E HP
Sbjct: 260 VENRPKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 259 WF 260
+
Sbjct: 320 YI 321
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 107/210 (50%), Gaps = 21/210 (10%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
+ YEI++ IG+G +GV R + T + +A+K I + + +R E+ + KH
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 113
Query: 59 NIVRFKEVLLTPT-------HLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGV 111
NI+ K++L PT + +V++ +L + I ++ + + R+F QL+ G+
Sbjct: 114 NIIAIKDIL-RPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQLLRGL 171
Query: 112 SYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSK---SSVLHSQPKST--VGTPAYI 166
Y HS Q+ HRDLK N L++ + +KI DFG ++ +S Q T V T Y
Sbjct: 172 KYMHSAQVIHRDLKPSNLLVNENC--ELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYR 229
Query: 167 APEV-LTKKEYDGKIADVWSCGVTLYVMLV 195
APE+ L+ EY I D+WS G ML
Sbjct: 230 APELMLSLHEYTQAI-DLWSVGCIFGEMLA 258
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 122/302 (40%), Gaps = 45/302 (14%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKH 57
++RY+ +K IGSG G+ D +A+K + R + H +R E++ + + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFE-RICNAGRFSEDEAR--FFFQQLISGVSYC 114
NI+ V L + EL + +C + D R + Q++ G+ +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHL 142
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKK 174
HS I HRDLK N ++ +KI DFG ++++ V T Y APEV+
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 175 EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSF----------- 223
Y + D+WS G + M+ G F + + K I ++ + F
Sbjct: 201 GYKENV-DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTY 259
Query: 224 ----PDYVRVSLE---------------------CKHLLSRIFVANSEKRITIPEIKNHP 258
P Y S E + LLS++ V ++ KRI++ E HP
Sbjct: 260 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 259 WF 260
+
Sbjct: 320 YI 321
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 127/302 (42%), Gaps = 45/302 (14%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKH 57
++RY+ +K IGSG G+ D +A+K + R + H +R E++ + + H
Sbjct: 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFE-RICNAGRFSEDEAR--FFFQQLISGVSYC 114
NI+ V L + EL + +C + D R + Q++ G+ +
Sbjct: 84 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHL 143
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKK 174
HS I HRDLK N ++ +KI DFG ++++ V T Y APEV+
Sbjct: 144 HSAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 201
Query: 175 EYDGKIADVWSCGVTLYVMLVGA--YPFED----------------PEDPKNFRKTI--- 213
Y + D+WS G + M+ G +P D PE K + T+
Sbjct: 202 GYKENV-DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTY 260
Query: 214 --GRILSVHYSF----PDYV---------RVSLECKHLLSRIFVANSEKRITIPEIKNHP 258
R YSF PD + + + + LLS++ V ++ KRI++ E HP
Sbjct: 261 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 320
Query: 259 WF 260
+
Sbjct: 321 YI 322
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 148/336 (44%), Gaps = 52/336 (15%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + +GSG +G D T +AVK + R + H +R E+ + +KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V L ++ + G +L I + ++D +F Q++ G+ Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVL 171
HS I HRDLK N ++ +KI DF ++ H+ + T V T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDC--ELKILDFYLAR----HTDDEMTGYVATRWYRAPEIM 194
Query: 172 TKKEYDGKIADVWSCGVTLYVMLVG--AYPFED------------------------PED 205
+ + D+WS G + +L G +P D E
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 206 PKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLR--- 262
+N+ +++ ++ ++++ ++ + LL ++ V +S+KRIT + H +F +
Sbjct: 255 ARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 263 --NLPIELTEGGSWQSHDV---NNPSQSLEEVLSLI 293
+ P+ S++S D+ S + +EV+S +
Sbjct: 314 PDDEPVADPYDQSFESRDLLIDEWKSLTYDEVISFV 349
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 92/202 (45%), Gaps = 13/202 (6%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE--RGQKIDEHVQREIMNHRSLKHPNI 60
RY + IG G +G+ D + +A+K I Q + REI +H NI
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 103
Query: 61 VRFKEVLLTPT----HLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
+ +++ PT ++ + G +L+ ++ S D +F Q++ G+ Y HS
Sbjct: 104 IGINDIIRAPTIEQMKDVYLVTHLMGADLY-KLLKTQHLSNDHICYFLYQILRGLKYIHS 162
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSK-SSVLHSQP---KSTVGTPAYIAPEVLT 172
+ HRDLK N LL+ T +KICDFG ++ + H V T Y APE++
Sbjct: 163 ANVLHRDLKPSNLLLN--TTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 220
Query: 173 KKEYDGKIADVWSCGVTLYVML 194
+ K D+WS G L ML
Sbjct: 221 NSKGYTKSIDIWSVGCILAEML 242
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 106/212 (50%), Gaps = 25/212 (11%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
+ YEI++ IG+G +GV R + T + +A+K I + + +R E+ + KH
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 114
Query: 59 NIVRFKEVLLTPT-------HLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGV 111
NI+ K++L PT + +V++ +L + I ++ + + R+F QL+ G+
Sbjct: 115 NIIAIKDIL-RPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQLLRGL 172
Query: 112 SYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPK-------STVGTPA 164
Y HS Q+ HRDLK N L++ + +KI DFG ++ L + P V T
Sbjct: 173 KYMHSAQVIHRDLKPSNLLVNENC--ELKIGDFGMARG--LCTSPAEHQYFMTEYVATRW 228
Query: 165 YIAPEV-LTKKEYDGKIADVWSCGVTLYVMLV 195
Y APE+ L+ EY I D+WS G ML
Sbjct: 229 YRAPELMLSLHEYTQAI-DLWSVGCIFGEMLA 259
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 126/291 (43%), Gaps = 36/291 (12%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
+R + ++ +GSG +G D R+ +AVK + R + H +R E+ + LKH
Sbjct: 28 QRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHE 87
Query: 59 NIVRFKEVLLTPTHLA----IVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYC 114
N++ +V T + + + G I + S++ +F QL+ G+ Y
Sbjct: 88 NVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYI 147
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKK 174
HS I HRDLK N ++ + ++I DFG ++ + + V T Y APE++
Sbjct: 148 HSAGIIHRDLKPSNVAVNEDS--ELRILDFGLARQA--DEEMTGYVATRWYRAPEIMLNW 203
Query: 175 EYDGKIADVWSCGVTLYVMLVGA--YPFEDPEDP-KNFRKTIG--------RILSVH--- 220
+ + D+WS G + +L G +P D D K + +G +I S H
Sbjct: 204 MHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHART 263
Query: 221 --YSFPDYVRVSLE---------CKHLLSRIFVANSEKRITIPEIKNHPWF 260
S P + L LL R+ V +S++R++ E H +F
Sbjct: 264 YIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYF 314
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 127/302 (42%), Gaps = 45/302 (14%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKH 57
++RY+ +K IGSG G+ D +A+K + R + H +R E++ + + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFE-RICNAGRFSEDEAR--FFFQQLISGVSYC 114
NI+ V L + EL + +C + D R + Q++ G+ +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHL 142
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKK 174
HS I HRDLK N ++ +KI DFG ++++ V T Y APEV+
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 175 EYDGKIADVWSCGVTLYVMLVGA--YPFED----------------PEDPKNFRKTI--- 213
Y + D+WS G + M+ G +P D PE K + T+
Sbjct: 201 GYKENV-DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTY 259
Query: 214 --GRILSVHYSF----PDYV---------RVSLECKHLLSRIFVANSEKRITIPEIKNHP 258
R YSF PD + + + + LLS++ V ++ KRI++ E HP
Sbjct: 260 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 259 WF 260
+
Sbjct: 320 YI 321
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 148/336 (44%), Gaps = 52/336 (15%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + +GSG +G D T +AVK + R + H +R E+ + +KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V L ++ + G +L I + ++D +F Q++ G+ Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVL 171
HS I HRDLK N ++ +KI FG ++ H+ + T V T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDC--ELKILGFGLAR----HTDDEMTGYVATRWYRAPEIM 194
Query: 172 TKKEYDGKIADVWSCGVTLYVMLVG--AYPFED------------------------PED 205
+ + D+WS G + +L G +P D E
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 206 PKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLR--- 262
+N+ +++ ++ ++++ ++ + LL ++ V +S+KRIT + H +F +
Sbjct: 255 ARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 263 --NLPIELTEGGSWQSHDV---NNPSQSLEEVLSLI 293
+ P+ S++S D+ S + +EV+S +
Sbjct: 314 PDDEPVADPYDQSFESRDLLIDEWKSLTYDEVISFV 349
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 127/302 (42%), Gaps = 45/302 (14%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKH 57
++RY+ +K IGSG G+ D +AVK + R + H +R E++ + + H
Sbjct: 21 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNH 80
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFE-RICNAGRFSEDEAR--FFFQQLISGVSYC 114
NI+ V L + EL + +C D R + Q++ G+ +
Sbjct: 81 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHL 140
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKK 174
HS I HRDLK N ++ +KI DFG ++++ + V T Y APEV+
Sbjct: 141 HSAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTASTNFMMTPYVVTRYYRAPEVILGM 198
Query: 175 EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRI------------------ 216
Y + D+WS G + ++ G+ F+ + + K I ++
Sbjct: 199 GYKENV-DIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNY 257
Query: 217 ---------LSVHYSFPDYVRVS---------LECKHLLSRIFVANSEKRITIPEIKNHP 258
++ FPD++ S + + LLS++ V + +KRI++ E HP
Sbjct: 258 VENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHP 317
Query: 259 WF 260
+
Sbjct: 318 YI 319
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 125/302 (41%), Gaps = 45/302 (14%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKH 57
++RY+ +K IGSG G+ D +AVK + R + H +R E++ + + H
Sbjct: 23 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNH 82
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFE-RICNAGRFSEDEAR--FFFQQLISGVSYC 114
NI+ V L + EL + +C D R + Q++ G+ +
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHL 142
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKK 174
HS I HRDLK N ++ +KI DFG ++++ + V T Y APEV+
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGM 200
Query: 175 EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRI------------------ 216
Y + D+WS G + ++ G F+ + + K I ++
Sbjct: 201 GYAANV-DIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNY 259
Query: 217 ---------LSVHYSFPDYVRVS---------LECKHLLSRIFVANSEKRITIPEIKNHP 258
+ FPD++ S + + LLS++ V + +KRI++ E HP
Sbjct: 260 VENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHP 319
Query: 259 WF 260
+
Sbjct: 320 YI 321
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 125/291 (42%), Gaps = 36/291 (12%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
+R + ++ +GSG +G D R+ +AVK + R + H +R E+ + LKH
Sbjct: 28 QRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHE 87
Query: 59 NIVRFKEVLLTPTHLA----IVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYC 114
N++ +V T + + + G I S++ +F QL+ G+ Y
Sbjct: 88 NVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYI 147
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKK 174
HS I HRDLK N ++ + ++I DFG ++ + + V T Y APE++
Sbjct: 148 HSAGIIHRDLKPSNVAVNEDS--ELRILDFGLARQA--DEEMTGYVATRWYRAPEIMLNW 203
Query: 175 EYDGKIADVWSCGVTLYVMLVGA--YPFEDPEDP-KNFRKTIG--------RILSVH--- 220
+ + D+WS G + +L G +P D D K + +G +I S H
Sbjct: 204 MHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHART 263
Query: 221 --YSFPDYVRVSLE---------CKHLLSRIFVANSEKRITIPEIKNHPWF 260
S P + L LL R+ V +S++R++ E H +F
Sbjct: 264 YIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYF 314
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 111/225 (49%), Gaps = 23/225 (10%)
Query: 5 EIVKDIGSGNFGVAKLVR----DKWTRELLAVKFIERGQKIDEHV---QREIMNHRSLKH 57
+ ++ +G GNFG ++ R T E++AVK ++ +EH+ +REI +SL+H
Sbjct: 13 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQH 70
Query: 58 PNIVRFKEVLLTP--THLAIVMEYAAGGELFERIC-NAGRFSEDEARFFFQQLISGVSYC 114
NIV++K V + +L ++MEY G L + + + R + + Q+ G+ Y
Sbjct: 71 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 130
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA-----YIAPE 169
+ + HRDL N L++ RVKI DFG +K + + V P + APE
Sbjct: 131 GTKRYIHRDLATRNILVENEN--RVKIGDFGLTK-VLPQDKEXXKVKEPGESPIFWYAPE 187
Query: 170 VLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIG 214
LT+ ++ +DVWS GV LY + + P P F + IG
Sbjct: 188 SLTESKF-SVASDVWSFGVVLYELFTYIEKSKSP--PAEFMRMIG 229
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 91/211 (43%), Gaps = 15/211 (7%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDE----HVQREIMNHRSLKH 57
+RYE+ + +G G L RD +AVK + D +RE N +L H
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 71
Query: 58 PNIVRFKEVLLTPTHLA----IVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
P IV + T IVMEY G L + + G + A +++
Sbjct: 72 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNF 131
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSK----SSVLHSQPKSTVGTPAYIAPE 169
H I HRD+K N L+ + A VK+ DFG ++ S Q + +GT Y++PE
Sbjct: 132 SHQNGIIHRDVKPANILISATNA--VKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPE 189
Query: 170 VLTKKEYDGKIADVWSCGVTLYVMLVGAYPF 200
D + +DV+S G LY +L G PF
Sbjct: 190 QARGDSVDAR-SDVYSLGCVLYEVLTGEPPF 219
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 111/225 (49%), Gaps = 23/225 (10%)
Query: 5 EIVKDIGSGNFGVAKLVR----DKWTRELLAVKFIERGQKIDEHV---QREIMNHRSLKH 57
+ ++ +G GNFG ++ R T E++AVK ++ +EH+ +REI +SL+H
Sbjct: 13 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQH 70
Query: 58 PNIVRFKEVLLTP--THLAIVMEYAAGGELFERIC-NAGRFSEDEARFFFQQLISGVSYC 114
NIV++K V + +L ++MEY G L + + + R + + Q+ G+ Y
Sbjct: 71 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 130
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA-----YIAPE 169
+ + HRDL N L++ RVKI DFG +K + + V P + APE
Sbjct: 131 GTKRYIHRDLATRNILVENEN--RVKIGDFGLTK-VLPQDKEXXKVKEPGESPIFWYAPE 187
Query: 170 VLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIG 214
LT+ ++ +DVWS GV LY + + P P F + IG
Sbjct: 188 SLTESKF-SVASDVWSFGVVLYELFTYIEKSKSP--PAEFMRMIG 229
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 127/302 (42%), Gaps = 45/302 (14%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKH 57
++RY+ +K IGSG G+ D +A+K + R + H +R E++ + + H
Sbjct: 25 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 84
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFE-RICNAGRFSEDEAR--FFFQQLISGVSYC 114
NI+ V L + EL + +C + D R + Q++ G+ +
Sbjct: 85 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHL 144
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKK 174
HS I HRDLK N ++ +KI DFG ++++ V T Y APEV+
Sbjct: 145 HSAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMVPFVVTRYYRAPEVILGM 202
Query: 175 EYDGKIADVWSCGVTLYVMLVGA--YPFED----------------PEDPKNFRKTI--- 213
Y + D+WS G + M+ G +P D PE K + T+
Sbjct: 203 GYKENV-DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTY 261
Query: 214 --GRILSVHYSF----PDYV---------RVSLECKHLLSRIFVANSEKRITIPEIKNHP 258
R YSF PD + + + + LLS++ V ++ KRI++ E HP
Sbjct: 262 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 321
Query: 259 WF 260
+
Sbjct: 322 YI 323
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 111/225 (49%), Gaps = 23/225 (10%)
Query: 5 EIVKDIGSGNFGVAKLVR----DKWTRELLAVKFIERGQKIDEHV---QREIMNHRSLKH 57
+ ++ +G GNFG ++ R T E++AVK ++ +EH+ +REI +SL+H
Sbjct: 31 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQH 88
Query: 58 PNIVRFKEVLLTP--THLAIVMEYAAGGELFERIC-NAGRFSEDEARFFFQQLISGVSYC 114
NIV++K V + +L ++MEY G L + + + R + + Q+ G+ Y
Sbjct: 89 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 148
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA-----YIAPE 169
+ + HRDL N L++ RVKI DFG +K + + V P + APE
Sbjct: 149 GTKRYIHRDLATRNILVENEN--RVKIGDFGLTK-VLPQDKEXXKVKEPGESPIFWYAPE 205
Query: 170 VLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIG 214
LT+ ++ +DVWS GV LY + + P P F + IG
Sbjct: 206 SLTESKF-SVASDVWSFGVVLYELFTYIEKSKSP--PAEFMRMIG 247
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 111/225 (49%), Gaps = 23/225 (10%)
Query: 5 EIVKDIGSGNFGVAKLVR----DKWTRELLAVKFIERGQKIDEHV---QREIMNHRSLKH 57
+ ++ +G GNFG ++ R T E++AVK ++ +EH+ +REI +SL+H
Sbjct: 44 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQH 101
Query: 58 PNIVRFKEVLLTP--THLAIVMEYAAGGELFERIC-NAGRFSEDEARFFFQQLISGVSYC 114
NIV++K V + +L ++MEY G L + + + R + + Q+ G+ Y
Sbjct: 102 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 161
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA-----YIAPE 169
+ + HRDL N L++ RVKI DFG +K + + V P + APE
Sbjct: 162 GTKRYIHRDLATRNILVENEN--RVKIGDFGLTK-VLPQDKEXXKVKEPGESPIFWYAPE 218
Query: 170 VLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIG 214
LT+ ++ +DVWS GV LY + + P P F + IG
Sbjct: 219 SLTESKF-SVASDVWSFGVVLYELFTYIEKSKSP--PAEFMRMIG 260
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 111/225 (49%), Gaps = 23/225 (10%)
Query: 5 EIVKDIGSGNFGVAKLVR----DKWTRELLAVKFIERGQKIDEHV---QREIMNHRSLKH 57
+ ++ +G GNFG ++ R T E++AVK ++ +EH+ +REI +SL+H
Sbjct: 19 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQH 76
Query: 58 PNIVRFKEVLLTP--THLAIVMEYAAGGELFERIC-NAGRFSEDEARFFFQQLISGVSYC 114
NIV++K V + +L ++MEY G L + + + R + + Q+ G+ Y
Sbjct: 77 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 136
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA-----YIAPE 169
+ + HRDL N L++ RVKI DFG +K + + V P + APE
Sbjct: 137 GTKRYIHRDLATRNILVENEN--RVKIGDFGLTK-VLPQDKEXXKVKEPGESPIFWYAPE 193
Query: 170 VLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIG 214
LT+ ++ +DVWS GV LY + + P P F + IG
Sbjct: 194 SLTESKF-SVASDVWSFGVVLYELFTYIEKSKSP--PAEFMRMIG 235
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 111/225 (49%), Gaps = 23/225 (10%)
Query: 5 EIVKDIGSGNFGVAKLVR----DKWTRELLAVKFIERGQKIDEHV---QREIMNHRSLKH 57
+ ++ +G GNFG ++ R T E++AVK ++ +EH+ +REI +SL+H
Sbjct: 16 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQH 73
Query: 58 PNIVRFKEVLLTP--THLAIVMEYAAGGELFERIC-NAGRFSEDEARFFFQQLISGVSYC 114
NIV++K V + +L ++MEY G L + + + R + + Q+ G+ Y
Sbjct: 74 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 133
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA-----YIAPE 169
+ + HRDL N L++ RVKI DFG +K + + V P + APE
Sbjct: 134 GTKRYIHRDLATRNILVENEN--RVKIGDFGLTK-VLPQDKEXXKVKEPGESPIFWYAPE 190
Query: 170 VLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIG 214
LT+ ++ +DVWS GV LY + + P P F + IG
Sbjct: 191 SLTESKF-SVASDVWSFGVVLYELFTYIEKSKSP--PAEFMRMIG 232
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 111/225 (49%), Gaps = 23/225 (10%)
Query: 5 EIVKDIGSGNFGVAKLVR----DKWTRELLAVKFIERGQKIDEHV---QREIMNHRSLKH 57
+ ++ +G GNFG ++ R T E++AVK ++ +EH+ +REI +SL+H
Sbjct: 11 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQH 68
Query: 58 PNIVRFKEVLLTP--THLAIVMEYAAGGELFERIC-NAGRFSEDEARFFFQQLISGVSYC 114
NIV++K V + +L ++MEY G L + + + R + + Q+ G+ Y
Sbjct: 69 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 128
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA-----YIAPE 169
+ + HRDL N L++ RVKI DFG +K + + V P + APE
Sbjct: 129 GTKRYIHRDLATRNILVENEN--RVKIGDFGLTK-VLPQDKEXXKVKEPGESPIFWYAPE 185
Query: 170 VLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIG 214
LT+ ++ +DVWS GV LY + + P P F + IG
Sbjct: 186 SLTESKF-SVASDVWSFGVVLYELFTYIEKSKSP--PAEFMRMIG 227
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 92/211 (43%), Gaps = 15/211 (7%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDE----HVQREIMNHRSLKH 57
+RYE+ + +G G L RD +AVK + D +RE N +L H
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 71
Query: 58 PNIVRFKEVLLTPTHLA----IVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
P IV + T IVMEY G L + + G + A +++
Sbjct: 72 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNF 131
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSK----SSVLHSQPKSTVGTPAYIAPE 169
H I HRD+K N ++ + A VK+ DFG ++ S +Q + +GT Y++PE
Sbjct: 132 SHQNGIIHRDVKPANIMISATNA--VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 170 VLTKKEYDGKIADVWSCGVTLYVMLVGAYPF 200
D + +DV+S G LY +L G PF
Sbjct: 190 QARGDSVDAR-SDVYSLGCVLYEVLTGEPPF 219
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 111/225 (49%), Gaps = 23/225 (10%)
Query: 5 EIVKDIGSGNFGVAKLVR----DKWTRELLAVKFIERGQKIDEHV---QREIMNHRSLKH 57
+ ++ +G GNFG ++ R T E++AVK ++ +EH+ +REI +SL+H
Sbjct: 12 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQH 69
Query: 58 PNIVRFKEVLLTP--THLAIVMEYAAGGELFERIC-NAGRFSEDEARFFFQQLISGVSYC 114
NIV++K V + +L ++MEY G L + + + R + + Q+ G+ Y
Sbjct: 70 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 129
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA-----YIAPE 169
+ + HRDL N L++ RVKI DFG +K + + V P + APE
Sbjct: 130 GTKRYIHRDLATRNILVENEN--RVKIGDFGLTK-VLPQDKEXXKVKEPGESPIFWYAPE 186
Query: 170 VLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIG 214
LT+ ++ +DVWS GV LY + + P P F + IG
Sbjct: 187 SLTESKF-SVASDVWSFGVVLYELFTYIEKSKSP--PAEFMRMIG 228
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 111/225 (49%), Gaps = 23/225 (10%)
Query: 5 EIVKDIGSGNFGVAKLVR----DKWTRELLAVKFIERGQKIDEHV---QREIMNHRSLKH 57
+ ++ +G GNFG ++ R T E++AVK ++ +EH+ +REI +SL+H
Sbjct: 16 KFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQH 73
Query: 58 PNIVRFKEVLLTP--THLAIVMEYAAGGELFERIC-NAGRFSEDEARFFFQQLISGVSYC 114
NIV++K V + +L ++ME+ G L E + + R + + Q+ G+ Y
Sbjct: 74 DNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYL 133
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA-----YIAPE 169
+ + HRDL N L++ RVKI DFG +K + + V P + APE
Sbjct: 134 GTKRYIHRDLATRNILVENEN--RVKIGDFGLTK-VLPQDKEXXKVKEPGESPIFWYAPE 190
Query: 170 VLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIG 214
LT+ ++ +DVWS GV LY + + P P F + IG
Sbjct: 191 SLTESKF-SVASDVWSFGVVLYELFTYIEKSKSP--PAEFMRMIG 232
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 148/336 (44%), Gaps = 52/336 (15%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + +GSG +G D T +AVK + R + H +R E+ + +KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V L ++ + G +L I + ++D +F Q++ G+ Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVL 171
HS I HRDLK N ++ +KI D G ++ H+ + T V T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDC--ELKILDAGLAR----HTDDEMTGYVATRWYRAPEIM 194
Query: 172 TKKEYDGKIADVWSCGVTLYVMLVG--AYPFED------------------------PED 205
+ + D+WS G + +L G +P D E
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 206 PKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLR--- 262
+N+ +++ ++ ++++ ++ + LL ++ V +S+KRIT + H +F +
Sbjct: 255 ARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 263 --NLPIELTEGGSWQSHDV---NNPSQSLEEVLSLI 293
+ P+ S++S D+ S + +EV+S +
Sbjct: 314 PDDEPVADPYDQSFESRDLLIDEWKSLTYDEVISFV 349
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 111/225 (49%), Gaps = 23/225 (10%)
Query: 5 EIVKDIGSGNFGVAKLVR----DKWTRELLAVKFIERGQKIDEHV---QREIMNHRSLKH 57
+ ++ +G GNFG ++ R T E++AVK ++ +EH+ +REI +SL+H
Sbjct: 18 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQH 75
Query: 58 PNIVRFKEVLLTP--THLAIVMEYAAGGELFERIC-NAGRFSEDEARFFFQQLISGVSYC 114
NIV++K V + +L ++MEY G L + + + R + + Q+ G+ Y
Sbjct: 76 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 135
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA-----YIAPE 169
+ + HRDL N L++ RVKI DFG +K + + V P + APE
Sbjct: 136 GTKRYIHRDLATRNILVENEN--RVKIGDFGLTK-VLPQDKEXXKVKEPGESPIFWYAPE 192
Query: 170 VLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIG 214
LT+ ++ +DVWS GV LY + + P P F + IG
Sbjct: 193 SLTESKF-SVASDVWSFGVVLYELFTYIEKSKSP--PAEFMRMIG 234
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 111/225 (49%), Gaps = 23/225 (10%)
Query: 5 EIVKDIGSGNFGVAKLVR----DKWTRELLAVKFIERGQKIDEHV---QREIMNHRSLKH 57
+ ++ +G GNFG ++ R T E++AVK ++ +EH+ +REI +SL+H
Sbjct: 17 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQH 74
Query: 58 PNIVRFKEVLLTP--THLAIVMEYAAGGELFERIC-NAGRFSEDEARFFFQQLISGVSYC 114
NIV++K V + +L ++MEY G L + + + R + + Q+ G+ Y
Sbjct: 75 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 134
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA-----YIAPE 169
+ + HRDL N L++ RVKI DFG +K + + V P + APE
Sbjct: 135 GTKRYIHRDLATRNILVENEN--RVKIGDFGLTK-VLPQDKEXXKVKEPGESPIFWYAPE 191
Query: 170 VLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIG 214
LT+ ++ +DVWS GV LY + + P P F + IG
Sbjct: 192 SLTESKF-SVASDVWSFGVVLYELFTYIEKSKSP--PAEFMRMIG 233
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 92/211 (43%), Gaps = 15/211 (7%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDE----HVQREIMNHRSLKH 57
+RYE+ + +G G L RD +AVK + D +RE N +L H
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 71
Query: 58 PNIVRFKEVLLTPTHLA----IVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
P IV + T IVMEY G L + + G + A +++
Sbjct: 72 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNF 131
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSK----SSVLHSQPKSTVGTPAYIAPE 169
H I HRD+K N ++ + A VK+ DFG ++ S +Q + +GT Y++PE
Sbjct: 132 SHQNGIIHRDVKPANIMISATNA--VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 170 VLTKKEYDGKIADVWSCGVTLYVMLVGAYPF 200
D + +DV+S G LY +L G PF
Sbjct: 190 QARGDSVDAR-SDVYSLGCVLYEVLTGEPPF 219
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 111/225 (49%), Gaps = 23/225 (10%)
Query: 5 EIVKDIGSGNFGVAKLVR----DKWTRELLAVKFIERGQKIDEHV---QREIMNHRSLKH 57
+ ++ +G GNFG ++ R T E++AVK ++ +EH+ +REI +SL+H
Sbjct: 31 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQH 88
Query: 58 PNIVRFKEVLLTP--THLAIVMEYAAGGELFERIC-NAGRFSEDEARFFFQQLISGVSYC 114
NIV++K V + +L ++MEY G L + + + R + + Q+ G+ Y
Sbjct: 89 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 148
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA-----YIAPE 169
+ + HRDL N L++ RVKI DFG +K + + V P + APE
Sbjct: 149 GTKRYIHRDLATRNILVENEN--RVKIGDFGLTK-VLPQDKEXXKVKEPGESPIFWYAPE 205
Query: 170 VLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIG 214
LT+ ++ +DVWS GV LY + + P P F + IG
Sbjct: 206 SLTESKF-SVASDVWSFGVVLYELFTYIEKSKSP--PAEFMRMIG 247
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 111/225 (49%), Gaps = 23/225 (10%)
Query: 5 EIVKDIGSGNFGVAKLVR----DKWTRELLAVKFIERGQKIDEHV---QREIMNHRSLKH 57
+ ++ +G GNFG ++ R T E++AVK ++ +EH+ +REI +SL+H
Sbjct: 20 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQH 77
Query: 58 PNIVRFKEVLLTP--THLAIVMEYAAGGELFERIC-NAGRFSEDEARFFFQQLISGVSYC 114
NIV++K V + +L ++MEY G L + + + R + + Q+ G+ Y
Sbjct: 78 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 137
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA-----YIAPE 169
+ + HRDL N L++ RVKI DFG +K + + V P + APE
Sbjct: 138 GTKRYIHRDLATRNILVENEN--RVKIGDFGLTK-VLPQDKEXXKVKEPGESPIFWYAPE 194
Query: 170 VLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIG 214
LT+ ++ +DVWS GV LY + + P P F + IG
Sbjct: 195 SLTESKF-SVASDVWSFGVVLYELFTYIEKSKSP--PAEFMRMIG 236
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 112/261 (42%), Gaps = 22/261 (8%)
Query: 1 MERYEIVKDIGSGNFG---VAKLVRDKWTRELLAVKFIE-RGQKIDEHVQREIMNHRSLK 56
+ + I K IG G F A + D L V+ + K +EI + L
Sbjct: 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN 90
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGR----FSEDEARFFFQQLISGVS 112
HPN++++ + L IV+E A G+L I + + E +F QL S +
Sbjct: 91 HPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALE 150
Query: 113 YCHSMQICHRDLKLENTLLDGSTAPRVKICDFGY-----SKSSVLHSQPKSTVGTPAYIA 167
+ HS ++ HRD+K N + + VK+ D G SK++ H S VGTP Y++
Sbjct: 151 HMHSRRVMHRDIKPANVFITATGV--VKLGDLGLGRFFSSKTTAAH----SLVGTPYYMS 204
Query: 168 PEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYV 227
PE + + Y+ K +D+WS G LY M PF D N +I Y
Sbjct: 205 PERIHENGYNFK-SDIWSLGCLLYEMAALQSPFYG--DKMNLYSLCKKIEQCDYPPLPSD 261
Query: 228 RVSLECKHLLSRIFVANSEKR 248
S E + L++ + EKR
Sbjct: 262 HYSEELRQLVNMCINPDPEKR 282
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 106/216 (49%), Gaps = 10/216 (4%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFI--ERGQKIDEHVQREIMNHRSLKHPNI 60
+++ ++ +G+G + +K T +A+K + + + REI + LKH NI
Sbjct: 6 QFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENI 65
Query: 61 VRFKEVLLTPTHLAIVMEYAAGG---ELFER-ICNAGRFSE-DEARFFFQQLISGVSYCH 115
VR +V+ T L +V E+ + R + N R E + ++F QL+ G+++CH
Sbjct: 66 VRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH 125
Query: 116 SMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLTKK 174
+I HRDLK +N L++ ++K+ DFG +++ + + S V T Y AP+VL
Sbjct: 126 ENKILHRDLKPQNLLINKRG--QLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGS 183
Query: 175 EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFR 210
D+WSCG L M+ G F D + +
Sbjct: 184 RTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLK 219
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 148/336 (44%), Gaps = 52/336 (15%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + +GSG +G D T +AVK + R + H +R E+ + +KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V L ++ + G +L I + ++D +F Q++ G+ Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVL 171
HS I HRDLK N ++ +KI D G ++ H+ + T V T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDC--ELKILDGGLAR----HTDDEMTGYVATRWYRAPEIM 194
Query: 172 TKKEYDGKIADVWSCGVTLYVMLVG--AYPFED------------------------PED 205
+ + D+WS G + +L G +P D E
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 206 PKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLR--- 262
+N+ +++ ++ ++++ ++ + LL ++ V +S+KRIT + H +F +
Sbjct: 255 ARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 263 --NLPIELTEGGSWQSHDV---NNPSQSLEEVLSLI 293
+ P+ S++S D+ S + +EV+S +
Sbjct: 314 PDDEPVADPYDQSFESRDLLIDEWKSLTYDEVISFV 349
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 92/211 (43%), Gaps = 15/211 (7%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDE----HVQREIMNHRSLKH 57
+RYE+ + +G G L RD +AVK + D +RE N +L H
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 71
Query: 58 PNIVRFKEVLLTPTHLA----IVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
P IV + T IVMEY G L + + G + A +++
Sbjct: 72 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNF 131
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSK----SSVLHSQPKSTVGTPAYIAPE 169
H I HRD+K N ++ + A VK+ DFG ++ S +Q + +GT Y++PE
Sbjct: 132 SHQNGIIHRDVKPANIMISATNA--VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 170 VLTKKEYDGKIADVWSCGVTLYVMLVGAYPF 200
D + +DV+S G LY +L G PF
Sbjct: 190 QARGDSVDAR-SDVYSLGCVLYEVLTGEPPF 219
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 148/336 (44%), Gaps = 52/336 (15%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
ERY+ + +GSG +G D T +AVK + R + H +R E+ + +KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 59 NIVRFKEVLLTPTHL-----AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
N++ +V L ++ + G +L I + ++D +F Q++ G+ Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVL 171
HS I HRDLK N ++ +KI D G ++ H+ + T V T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDC--ELKILDRGLAR----HTDDEMTGYVATRWYRAPEIM 194
Query: 172 TKKEYDGKIADVWSCGVTLYVMLVG--AYPFED------------------------PED 205
+ + D+WS G + +L G +P D E
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 206 PKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLR--- 262
+N+ +++ ++ ++++ ++ + LL ++ V +S+KRIT + H +F +
Sbjct: 255 ARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 263 --NLPIELTEGGSWQSHDV---NNPSQSLEEVLSLI 293
+ P+ S++S D+ S + +EV+S +
Sbjct: 314 PDDEPVADPYDQSFESRDLLIDEWKSLTYDEVISFV 349
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 127/302 (42%), Gaps = 45/302 (14%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKH 57
++RY+ +K IGSG G+ D +A+K + R + H +R E++ + + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFE-RICNAGRFSEDEAR--FFFQQLISGVSYC 114
NI+ V L + EL + + + D R + Q++ G+ +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHL 142
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKK 174
HS I HRDLK N ++ +KI DFG ++++ V T Y APEV+
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDAT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 175 EYDGKIADVWSCGVTLYVMLVGA--YPFED----------------PEDPKNFRKTI--- 213
Y + D+WS GV + M+ G +P D PE K + T+
Sbjct: 201 GYKENV-DIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTY 259
Query: 214 --GRILSVHYSF----PDYV---------RVSLECKHLLSRIFVANSEKRITIPEIKNHP 258
R YSF PD + + + + LLS++ V ++ KRI++ E HP
Sbjct: 260 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 259 WF 260
+
Sbjct: 320 YI 321
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 92/211 (43%), Gaps = 15/211 (7%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDE----HVQREIMNHRSLKH 57
+RYE+ + +G G L RD +AVK + D +RE N +L H
Sbjct: 29 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 88
Query: 58 PNIVRFKEVLLTPTHLA----IVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
P IV + T IVMEY G L + + G + A +++
Sbjct: 89 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNF 148
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSK----SSVLHSQPKSTVGTPAYIAPE 169
H I HRD+K N ++ + A VK+ DFG ++ S +Q + +GT Y++PE
Sbjct: 149 SHQNGIIHRDVKPANIMISATNA--VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 206
Query: 170 VLTKKEYDGKIADVWSCGVTLYVMLVGAYPF 200
D + +DV+S G LY +L G PF
Sbjct: 207 QARGDSVDAR-SDVYSLGCVLYEVLTGEPPF 236
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 123/287 (42%), Gaps = 37/287 (12%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRF 63
+E + +G G FG R+ A+K I ++ + E+M SL H +VR+
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRY 67
Query: 64 KEVLL-------------TPTHLAIVMEYAAGGELFERICNAGRFSE-DEARFFFQQLIS 109
L + L I MEY L++ I + + DE F+Q++
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILE 127
Query: 110 GVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSS-------VLHSQP------ 156
+SY HS I HRDLK N +D S VKI DFG +K+ L SQ
Sbjct: 128 ALSYIHSQGIIHRDLKPMNIFIDESR--NVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 157 --KSTVGTPAYIAPEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIG 214
S +GT Y+A EVL + + D++S G+ + M+ YPF + N K +
Sbjct: 186 NLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YPFSTGMERVNILKKL- 241
Query: 215 RILSVHYSFPDYVRVSLECKHLLSRIFVANS-EKRITIPEIKNHPWF 260
R +S+ + PD+ ++ + + R+ + + KR + N W
Sbjct: 242 RSVSIEFP-PDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 107/241 (44%), Gaps = 18/241 (7%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQK------IDEHVQREIMNHRSL 55
+RYE + +G G F RDK T +++A+K I+ G + I+ REI + L
Sbjct: 10 KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL 69
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCH 115
HPNI+ + +++++V ++ N+ + + + + G+ Y H
Sbjct: 70 SHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH 129
Query: 116 SMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLTKK 174
I HRDLK N LLD + +K+ DFG +KS + V T Y APE+L
Sbjct: 130 QHWILHRDLKPNNLLLDENGV--LKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGA 187
Query: 175 EYDGKIADVWSCGVTLYVMLVGAYPF----EDPEDPKNFRKTIGRILSVHY----SFPDY 226
G D+W+ G L +L+ PF D + +T+G + S PDY
Sbjct: 188 RMYGVGVDMWAVGCILAELLLRV-PFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDY 246
Query: 227 V 227
V
Sbjct: 247 V 247
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 124/291 (42%), Gaps = 36/291 (12%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKHP 58
+R + ++ +GSG +G D R+ +AVK + R + H +R E+ + LKH
Sbjct: 20 QRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHE 79
Query: 59 NIVRFKEVLLTPTHLA----IVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYC 114
N++ +V T + + + G I S++ +F QL+ G+ Y
Sbjct: 80 NVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYI 139
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKK 174
HS I HRDLK N ++ ++I DFG ++ + + V T Y APE++
Sbjct: 140 HSAGIIHRDLKPSNVAVNEDC--ELRILDFGLARQA--DEEMTGYVATRWYRAPEIMLNW 195
Query: 175 EYDGKIADVWSCGVTLYVMLVGA--YPFEDPEDP-KNFRKTIG--------RILSVH--- 220
+ + D+WS G + +L G +P D D K + +G +I S H
Sbjct: 196 MHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHART 255
Query: 221 --YSFPDYVRVSLE---------CKHLLSRIFVANSEKRITIPEIKNHPWF 260
S P + L LL R+ V +S++R++ E H +F
Sbjct: 256 YIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYF 306
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 91/211 (43%), Gaps = 15/211 (7%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDE----HVQREIMNHRSLKH 57
+RYE+ + +G G L RD +AVK + D +RE N +L H
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 71
Query: 58 PNIVRFKEVLLTPTHLA----IVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
P IV T IVMEY G L + + G + A +++
Sbjct: 72 PAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNF 131
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSK----SSVLHSQPKSTVGTPAYIAPE 169
H I HRD+K N ++ + A VK+ DFG ++ S +Q + +GT Y++PE
Sbjct: 132 SHQNGIIHRDVKPANIMISATNA--VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 170 VLTKKEYDGKIADVWSCGVTLYVMLVGAYPF 200
D + +DV+S G LY +L G PF
Sbjct: 190 QARGDSVDAR-SDVYSLGCVLYEVLTGEPPF 219
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 127/302 (42%), Gaps = 45/302 (14%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKH 57
++RY+ +K IGSG G+ D +A+K + R + H +R E++ + + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFE-RICNAGRFSEDEAR--FFFQQLISGVSYC 114
NI+ V L + EL + + + D R + Q++ G+ +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHL 142
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKK 174
HS I HRDLK N ++ +KI DFG ++++ V T Y APEV+
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDAT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 175 EYDGKIADVWSCGVTLYVMLVGA--YPFED----------------PEDPKNFRKTI--- 213
Y + D+WS GV + M+ G +P D PE K + T+
Sbjct: 201 GYKENV-DIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTY 259
Query: 214 --GRILSVHYSF----PDYV---------RVSLECKHLLSRIFVANSEKRITIPEIKNHP 258
R YSF PD + + + + LLS++ V ++ KRI++ E HP
Sbjct: 260 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 259 WF 260
+
Sbjct: 320 YI 321
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 91/202 (45%), Gaps = 13/202 (6%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE--RGQKIDEHVQREIMNHRSLKHPNI 60
RY + IG G +G+ D + +A+K I Q + REI +H NI
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENI 87
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGELFE----RICNAGRFSEDEARFFFQQLISGVSYCHS 116
+ +++ PT + + + +L E ++ S D +F Q++ G+ Y HS
Sbjct: 88 IGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 146
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSK-SSVLHSQP---KSTVGTPAYIAPEVLT 172
+ HRDLK N LL+ T +KICDFG ++ + H V T Y APE++
Sbjct: 147 ANVLHRDLKPSNLLLN--TTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 173 KKEYDGKIADVWSCGVTLYVML 194
+ K D+WS G L ML
Sbjct: 205 NSKGYTKSIDIWSVGCILAEML 226
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 98/211 (46%), Gaps = 19/211 (9%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNI 60
M+R+++ + G G FG +L ++K T +A+K + + + + + + L HPNI
Sbjct: 22 MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNI 81
Query: 61 VRFKEVLLT-------PTHLAIVMEYAAGGELFERICNAGRFSEDEA------RFFFQQL 107
V+ + T +L +VMEY + R C + A + F QL
Sbjct: 82 VQLQSYFYTLGERDRRDIYLNVVMEYVP--DTLHRCCR-NYYRRQVAPPPILIKVFLFQL 138
Query: 108 ISGVSYCH--SMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAY 165
I + H S+ +CHRD+K N L++ + +K+CDFG +K + + + Y
Sbjct: 139 IRSIGCLHLPSVNVCHRDIKPHNVLVNEADG-TLKLCDFGSAKKLSPSEPNVAYICSRYY 197
Query: 166 IAPEVLTKKEYDGKIADVWSCGVTLYVMLVG 196
APE++ ++ D+WS G M++G
Sbjct: 198 RAPELIFGNQHYTTAVDIWSVGCIFAEMMLG 228
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 118/259 (45%), Gaps = 25/259 (9%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQ---REIMNHRSLKHPNIVRFKEV 66
IGSG+FG + + KW ++ AVK + + +Q E+ R +H NI+ F
Sbjct: 32 IGSGSFGT--VYKGKWHGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 67 LLTPTHLAIVMEYAAGGELFERI-CNAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLK 125
P LAIV ++ G L+ + + +F + +Q G+ Y H+ I HRDLK
Sbjct: 89 STAP-QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLK 147
Query: 126 LENTLLDGSTAPRVKICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVLTKKEYD--GKI 180
N L VKI DFG + S Q + G+ ++APEV+ ++ +
Sbjct: 148 SNNIFLHEDNT--VKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 205
Query: 181 ADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGR-ILSVHYSFPDYVRVSLEC----KH 235
+DV++ G+ LY ++ G P+ + + + +GR LS PD +V C K
Sbjct: 206 SDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLS-----PDLSKVRSNCPKRMKR 260
Query: 236 LLSRIFVANSEKRITIPEI 254
L++ ++R + P I
Sbjct: 261 LMAECLKKKRDERPSFPRI 279
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 111/225 (49%), Gaps = 23/225 (10%)
Query: 5 EIVKDIGSGNFGVAKLVR----DKWTRELLAVKFIERGQKIDEHV---QREIMNHRSLKH 57
+ ++ +G GNFG ++ R T E++AVK ++ +EH+ +REI +SL+H
Sbjct: 13 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQH 70
Query: 58 PNIVRFKEVLLTP--THLAIVMEYAAGGELFERIC-NAGRFSEDEARFFFQQLISGVSYC 114
NIV++K V + +L ++MEY G L + + + R + + Q+ G+ Y
Sbjct: 71 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 130
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA-----YIAPE 169
+ + HRDL N L++ RVKI DFG +K + + V P + APE
Sbjct: 131 GTKRYIHRDLATRNILVENEN--RVKIGDFGLTK-VLPQDKEFFKVKEPGESPIFWYAPE 187
Query: 170 VLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIG 214
LT+ ++ +DVWS GV LY + + P P F + IG
Sbjct: 188 SLTESKF-SVASDVWSFGVVLYELFTYIEKSKSP--PAEFMRMIG 229
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 118/259 (45%), Gaps = 25/259 (9%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQ---REIMNHRSLKHPNIVRFKEV 66
IGSG+FG + + KW ++ AVK + + +Q E+ R +H NI+ F
Sbjct: 32 IGSGSFGT--VYKGKWHGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 67 LLTPTHLAIVMEYAAGGELFERI-CNAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLK 125
P LAIV ++ G L+ + + +F + +Q G+ Y H+ I HRDLK
Sbjct: 89 STKP-QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLK 147
Query: 126 LENTLLDGSTAPRVKICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVLTKKEYD--GKI 180
N L VKI DFG + S Q + G+ ++APEV+ ++ +
Sbjct: 148 SNNIFLHEDNT--VKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 205
Query: 181 ADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGR-ILSVHYSFPDYVRVSLEC----KH 235
+DV++ G+ LY ++ G P+ + + + +GR LS PD +V C K
Sbjct: 206 SDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLS-----PDLSKVRSNCPKRMKR 260
Query: 236 LLSRIFVANSEKRITIPEI 254
L++ ++R + P I
Sbjct: 261 LMAECLKKKRDERPSFPRI 279
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 92/202 (45%), Gaps = 13/202 (6%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE--RGQKIDEHVQREIMNHRSLKHPNI 60
RY + IG G +G+ D + +A+K I Q + REI + +H NI
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENI 85
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGELFE----RICNAGRFSEDEARFFFQQLISGVSYCHS 116
+ +++ PT + + + +L E ++ S D +F Q++ G+ Y HS
Sbjct: 86 IGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 144
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSK-SSVLHSQP---KSTVGTPAYIAPEVLT 172
+ HRDLK N LL+ T +KICDFG ++ + H V T Y APE++
Sbjct: 145 ANVLHRDLKPSNLLLN--TTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 173 KKEYDGKIADVWSCGVTLYVML 194
+ K D+WS G L ML
Sbjct: 203 NSKGYTKSIDIWSVGCILAEML 224
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 124/300 (41%), Gaps = 46/300 (15%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQK--IDEHVQREIMNHRSLKHPNIV 61
+++ +G G +GV K T E++A+K IE K REI + KH NI+
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENII 72
Query: 62 RFKEVLLTPTHLAIVMEYAAGGELFE----RICNAGRFSEDEARFFFQQLISGVSYCHSM 117
+ P E EL + R+ + S+D ++F Q + V H
Sbjct: 73 TIFNIQ-RPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGS 131
Query: 118 QICHRDLKLENTLLDGSTAPRVKICDFGYSK----SSVLHSQP-------KSTVGTPAYI 166
+ HRDLK N L++ + +K+CDFG ++ S+ +S+P V T Y
Sbjct: 132 NVIHRDLKPSNLLINSNCD--LKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYR 189
Query: 167 APEVLTKKEYDGKIADVWSCGVTLYVMLV--GAYPFED--------------PEDPKNFR 210
APEV+ + DVWSCG L + + +P D P + R
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLR 249
Query: 211 -------KTIGRILSVHYSFP---DYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWF 260
+ + L ++ + P + RV+ + LL R+ V + KRIT E HP+
Sbjct: 250 CIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYL 309
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 124/300 (41%), Gaps = 46/300 (15%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQK--IDEHVQREIMNHRSLKHPNIV 61
+++ +G G +GV K T E++A+K IE K REI + KH NI+
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENII 72
Query: 62 RFKEVLLTPTHLAIVMEYAAGGELFE----RICNAGRFSEDEARFFFQQLISGVSYCHSM 117
+ P E EL + R+ + S+D ++F Q + V H
Sbjct: 73 TIFNIQ-RPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGS 131
Query: 118 QICHRDLKLENTLLDGSTAPRVKICDFGYSK----SSVLHSQPKST-------VGTPAYI 166
+ HRDLK N L++ + +K+CDFG ++ S+ +S+P V T Y
Sbjct: 132 NVIHRDLKPSNLLINSNCD--LKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYR 189
Query: 167 APEVLTKKEYDGKIADVWSCGVTLYVMLV--GAYPFED--------------PEDPKNFR 210
APEV+ + DVWSCG L + + +P D P + R
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLR 249
Query: 211 -------KTIGRILSVHYSFP---DYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWF 260
+ + L ++ + P + RV+ + LL R+ V + KRIT E HP+
Sbjct: 250 CIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYL 309
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 124/300 (41%), Gaps = 46/300 (15%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQK--IDEHVQREIMNHRSLKHPNIV 61
+++ +G G +GV K T E++A+K IE K REI + KH NI+
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENII 72
Query: 62 RFKEVLLTPTHLAIVMEYAAGGELFE----RICNAGRFSEDEARFFFQQLISGVSYCHSM 117
+ P E EL + R+ + S+D ++F Q + V H
Sbjct: 73 TIFNIQ-RPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGS 131
Query: 118 QICHRDLKLENTLLDGSTAPRVKICDFGYSK----SSVLHSQPKST-------VGTPAYI 166
+ HRDLK N L++ + +K+CDFG ++ S+ +S+P V T Y
Sbjct: 132 NVIHRDLKPSNLLINSNCD--LKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYR 189
Query: 167 APEVLTKKEYDGKIADVWSCGVTLYVMLV--GAYPFED--------------PEDPKNFR 210
APEV+ + DVWSCG L + + +P D P + R
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLR 249
Query: 211 -------KTIGRILSVHYSFP---DYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWF 260
+ + L ++ + P + RV+ + LL R+ V + KRIT E HP+
Sbjct: 250 CIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYL 309
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 91/202 (45%), Gaps = 13/202 (6%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE--RGQKIDEHVQREIMNHRSLKHPNI 60
RY + IG G +G+ D + +A+K I Q + REI +H NI
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGELFE----RICNAGRFSEDEARFFFQQLISGVSYCHS 116
+ +++ PT + + + +L E ++ S D +F Q++ G+ Y HS
Sbjct: 88 IGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 146
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSK-SSVLHSQP---KSTVGTPAYIAPEVLT 172
+ HRDLK N LL+ T +KICDFG ++ + H V T Y APE++
Sbjct: 147 ANVLHRDLKPSNLLLN--TTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 173 KKEYDGKIADVWSCGVTLYVML 194
+ K D+WS G L ML
Sbjct: 205 NSKGYTKSIDIWSVGCILAEML 226
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 120/260 (46%), Gaps = 27/260 (10%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQ---REIMNHRSLKHPNIVRFKEV 66
IGSG+FG + + KW ++ AVK + + +Q E+ R +H NI+ F
Sbjct: 20 IGSGSFGT--VYKGKWHGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 76
Query: 67 LLTPTHLAIVMEYAAGGELFERI-CNAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLK 125
P LAIV ++ G L+ + + +F + +Q G+ Y H+ I HRDLK
Sbjct: 77 STKP-QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLK 135
Query: 126 LENTLLDGSTAPRVKICDFGY----SKSSVLHSQPKSTVGTPAYIAPEVLTKKEYD--GK 179
N L VKI DFG S+ S H Q + G+ ++APEV+ ++ +
Sbjct: 136 SNNIFLHEDNT--VKIGDFGLATVKSRWSGSH-QFEQLSGSILWMAPEVIRMQDSNPYSF 192
Query: 180 IADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGR-ILSVHYSFPDYVRVSLEC----K 234
+DV++ G+ LY ++ G P+ + + + +GR LS PD +V C K
Sbjct: 193 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLS-----PDLSKVRSNCPKRMK 247
Query: 235 HLLSRIFVANSEKRITIPEI 254
L++ ++R + P I
Sbjct: 248 RLMAECLKKKRDERPSFPRI 267
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 92/202 (45%), Gaps = 13/202 (6%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE--RGQKIDEHVQREIMNHRSLKHPNI 60
RY + IG G +G+ D + +A+K I Q + REI + +H NI
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENI 85
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGELFE----RICNAGRFSEDEARFFFQQLISGVSYCHS 116
+ +++ PT + + + +L E ++ S D +F Q++ G+ Y HS
Sbjct: 86 IGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 144
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSK-SSVLHSQP---KSTVGTPAYIAPEVLT 172
+ HRDLK N LL+ T +KICDFG ++ + H V T Y APE++
Sbjct: 145 ANVLHRDLKPSNLLLN--TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 173 KKEYDGKIADVWSCGVTLYVML 194
+ K D+WS G L ML
Sbjct: 203 NSKGYTKSIDIWSVGCILAEML 224
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 91/202 (45%), Gaps = 13/202 (6%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE--RGQKIDEHVQREIMNHRSLKHPNI 60
RY + IG G +G+ D + +A+K I Q + REI +H NI
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGELFE----RICNAGRFSEDEARFFFQQLISGVSYCHS 116
+ +++ PT + + + +L E ++ S D +F Q++ G+ Y HS
Sbjct: 88 IGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 146
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSK-SSVLHSQP---KSTVGTPAYIAPEVLT 172
+ HRDLK N LL+ T +KICDFG ++ + H V T Y APE++
Sbjct: 147 ANVLHRDLKPSNLLLN--TTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIML 204
Query: 173 KKEYDGKIADVWSCGVTLYVML 194
+ K D+WS G L ML
Sbjct: 205 NSKGYTKSIDIWSVGCILAEML 226
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 91/202 (45%), Gaps = 13/202 (6%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE--RGQKIDEHVQREIMNHRSLKHPNI 60
RY + IG G +G+ D + +A+K I Q + REI +H NI
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 88
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGELFE----RICNAGRFSEDEARFFFQQLISGVSYCHS 116
+ +++ PT + + + +L E ++ S D +F Q++ G+ Y HS
Sbjct: 89 IGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 147
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSK-SSVLHSQP---KSTVGTPAYIAPEVLT 172
+ HRDLK N LL+ T +KICDFG ++ + H V T Y APE++
Sbjct: 148 ANVLHRDLKPSNLLLN--TTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIML 205
Query: 173 KKEYDGKIADVWSCGVTLYVML 194
+ K D+WS G L ML
Sbjct: 206 NSKGYTKSIDIWSVGCILAEML 227
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 127/302 (42%), Gaps = 45/302 (14%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKH 57
++RY+ +K IGSG G+ D +A+K + R + H +R E++ + + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFE-RICNAGRFSEDEAR--FFFQQLISGVSYC 114
NI+ V L + EL + +C + D R + Q++ G+ +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHL 142
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKK 174
HS I HRDLK N ++ +KI DFG ++++ + V T Y APEV+
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGM 200
Query: 175 EYDGKIADVWSCGVTLYVMLVGA--YPFED----------------PEDPKNFRKTI--- 213
Y + D+WS G + M+ +P D PE K + T+
Sbjct: 201 GYKENV-DLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTY 259
Query: 214 --GRILSVHYS----FPDYV---------RVSLECKHLLSRIFVANSEKRITIPEIKNHP 258
R YS FPD + + + + LLS++ V ++ KRI++ E HP
Sbjct: 260 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 259 WF 260
+
Sbjct: 320 YI 321
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 112/224 (50%), Gaps = 21/224 (9%)
Query: 5 EIVKDIGSGNFGVAKLVR----DKWTRELLAVKFIERGQKIDEHV---QREIMNHRSLKH 57
+ ++ +G GNFG ++ R T E++AVK ++ +EH+ +REI +SL+H
Sbjct: 14 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQH 71
Query: 58 PNIVRFKEVLLTP--THLAIVMEYAAGGELFERIC-NAGRFSEDEARFFFQQLISGVSYC 114
NIV++K V + +L ++MEY G L + + + R + + Q+ G+ Y
Sbjct: 72 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 131
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSK---SSVLHSQPKSTVGTPAY-IAPEV 170
+ + HR+L N L++ RVKI DFG +K + + K +P + APE
Sbjct: 132 GTKRYIHRNLATRNILVENEN--RVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPES 189
Query: 171 LTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIG 214
LT+ ++ +DVWS GV LY + + P P F + IG
Sbjct: 190 LTESKF-SVASDVWSFGVVLYELFTYIEKSKSP--PAEFMRMIG 230
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 91/202 (45%), Gaps = 13/202 (6%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE--RGQKIDEHVQREIMNHRSLKHPNI 60
RY + IG G +G+ D + +A+K I Q + REI +H NI
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 81
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGELFE----RICNAGRFSEDEARFFFQQLISGVSYCHS 116
+ +++ PT + + + +L E ++ S D +F Q++ G+ Y HS
Sbjct: 82 IGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 140
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSK-SSVLHSQP---KSTVGTPAYIAPEVLT 172
+ HRDLK N LL+ T +KICDFG ++ + H V T Y APE++
Sbjct: 141 ANVLHRDLKPSNLLLN--TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 198
Query: 173 KKEYDGKIADVWSCGVTLYVML 194
+ K D+WS G L ML
Sbjct: 199 NSKGYTKSIDIWSVGCILAEML 220
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 104/228 (45%), Gaps = 19/228 (8%)
Query: 6 IVKDIGSGNFGVAKLVRDKW-TRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRFK 64
V++IGSG FG+ L W ++ +A+K I G +E E L HP +V+
Sbjct: 11 FVQEIGSGQFGLVHL--GYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLY 68
Query: 65 EVLLTPTHLAIVMEYAAGGELFERI-CNAGRFSEDEARFFFQQLISGVSYCHSMQICHRD 123
V L + +V E+ G L + + G F+ + + G++Y + HRD
Sbjct: 69 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEASVIHRD 128
Query: 124 LKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTP---AYIAPEVLTKKEYDGKI 180
L N L+ + +K+ DFG ++ VL Q S+ GT + +PEV + Y K
Sbjct: 129 LAARNCLVGENQV--IKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK- 184
Query: 181 ADVWSCGVTLY-VMLVGAYPFEDPEDPK-------NFRKTIGRILSVH 220
+DVWS GV ++ V G P+E+ + + FR R+ S H
Sbjct: 185 SDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTH 232
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 127/291 (43%), Gaps = 53/291 (18%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIER---GQKIDEHVQREIMNHRSLKHPNIVRFKEV 66
+GSG +G DK + E +A+K + R + + RE++ + ++H N++ +V
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 67 LLTPTHLA------IVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQIC 120
+ L +VM + ++I +FSE++ ++ Q++ G+ Y HS +
Sbjct: 92 FTPASSLRNFYDFYLVMPFMQTD--LQKIMGL-KFSEEKIQYLVYQMLKGLKYIHSAGVV 148
Query: 121 HRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLTKKEYDG 178
HRDLK N ++ +KI DFG ++ H+ + T V T Y APEV+ +
Sbjct: 149 HRDLKPGNLAVNEDC--ELKILDFGLAR----HADAEMTGYVVTRWYRAPEVILSWMHYN 202
Query: 179 KIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVH------------------ 220
+ D+WS G + ML G F+ K++ + +IL V
Sbjct: 203 QTVDIWSVGCIMAEMLTGKTLFKG----KDYLDQLTQILKVTGVPGTEFVQKLNDKAAKS 258
Query: 221 --YSFPD---------YVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWF 260
S P + R S + LL ++ + +KR+T + HP+F
Sbjct: 259 YIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF 309
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 91/202 (45%), Gaps = 13/202 (6%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE--RGQKIDEHVQREIMNHRSLKHPNI 60
RY + IG G +G+ D + +A+K I Q + REI +H NI
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 81
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGELFE----RICNAGRFSEDEARFFFQQLISGVSYCHS 116
+ +++ PT + + + +L E ++ S D +F Q++ G+ Y HS
Sbjct: 82 IGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 140
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSK-SSVLHSQP---KSTVGTPAYIAPEVLT 172
+ HRDLK N LL+ T +KICDFG ++ + H V T Y APE++
Sbjct: 141 ANVLHRDLKPSNLLLN--TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 198
Query: 173 KKEYDGKIADVWSCGVTLYVML 194
+ K D+WS G L ML
Sbjct: 199 NSKGYTKSIDIWSVGCILAEML 220
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 91/202 (45%), Gaps = 13/202 (6%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE--RGQKIDEHVQREIMNHRSLKHPNI 60
RY + IG G +G+ D + +A+K I Q + REI +H NI
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGELFE----RICNAGRFSEDEARFFFQQLISGVSYCHS 116
+ +++ PT + + + +L E ++ S D +F Q++ G+ Y HS
Sbjct: 84 IGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 142
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSK-SSVLHSQP---KSTVGTPAYIAPEVLT 172
+ HRDLK N LL+ T +KICDFG ++ + H V T Y APE++
Sbjct: 143 ANVLHRDLKPSNLLLN--TTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 173 KKEYDGKIADVWSCGVTLYVML 194
+ K D+WS G L ML
Sbjct: 201 NSKGYTKSIDIWSVGCILAEML 222
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 121/302 (40%), Gaps = 45/302 (14%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKH 57
++RY+ +K IGSG G+ D +A+K + R + H +R E++ + + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFE-RICNAGRFSEDEAR--FFFQQLISGVSYC 114
NI+ V L + EL + + + D R + Q++ G+ +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHL 142
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKK 174
HS I HRDLK N ++ +KI DFG ++++ V T Y APEV+
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDAT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 175 EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSF----------- 223
Y + D+WS G + M+ G F + + K I ++ + F
Sbjct: 201 GYKENV-DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTY 259
Query: 224 ----PDYVRVSLE---------------------CKHLLSRIFVANSEKRITIPEIKNHP 258
P Y S E + LLS++ V ++ KRI++ E HP
Sbjct: 260 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 259 WF 260
+
Sbjct: 320 YI 321
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 91/202 (45%), Gaps = 13/202 (6%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE--RGQKIDEHVQREIMNHRSLKHPNI 60
RY + IG G +G+ D + +A+K I Q + REI +H NI
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 88
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGELFE----RICNAGRFSEDEARFFFQQLISGVSYCHS 116
+ +++ PT + + + +L E ++ S D +F Q++ G+ Y HS
Sbjct: 89 IGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 147
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSK-SSVLHSQP---KSTVGTPAYIAPEVLT 172
+ HRDLK N LL+ T +KICDFG ++ + H V T Y APE++
Sbjct: 148 ANVLHRDLKPSNLLLN--TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 205
Query: 173 KKEYDGKIADVWSCGVTLYVML 194
+ K D+WS G L ML
Sbjct: 206 NSKGYTKSIDIWSVGCILAEML 227
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 91/202 (45%), Gaps = 13/202 (6%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE--RGQKIDEHVQREIMNHRSLKHPNI 60
RY + IG G +G+ D + +A+K I Q + REI +H NI
Sbjct: 30 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 89
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGELFE----RICNAGRFSEDEARFFFQQLISGVSYCHS 116
+ +++ PT + + + +L E ++ S D +F Q++ G+ Y HS
Sbjct: 90 IGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 148
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSK-SSVLHSQP---KSTVGTPAYIAPEVLT 172
+ HRDLK N LL+ T +KICDFG ++ + H V T Y APE++
Sbjct: 149 ANVLHRDLKPSNLLLN--TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 206
Query: 173 KKEYDGKIADVWSCGVTLYVML 194
+ K D+WS G L ML
Sbjct: 207 NSKGYTKSIDIWSVGCILAEML 228
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 91/202 (45%), Gaps = 13/202 (6%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE--RGQKIDEHVQREIMNHRSLKHPNI 60
RY + IG G +G+ D + +A+K I Q + REI +H NI
Sbjct: 21 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 80
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGELFE----RICNAGRFSEDEARFFFQQLISGVSYCHS 116
+ +++ PT + + + +L E ++ S D +F Q++ G+ Y HS
Sbjct: 81 IGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 139
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSK-SSVLHSQP---KSTVGTPAYIAPEVLT 172
+ HRDLK N LL+ T +KICDFG ++ + H V T Y APE++
Sbjct: 140 ANVLHRDLKPSNLLLN--TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 197
Query: 173 KKEYDGKIADVWSCGVTLYVML 194
+ K D+WS G L ML
Sbjct: 198 NSKGYTKSIDIWSVGCILAEML 219
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 91/202 (45%), Gaps = 13/202 (6%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE--RGQKIDEHVQREIMNHRSLKHPNI 60
RY + IG G +G+ D + +A+K I Q + REI +H NI
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGELFE----RICNAGRFSEDEARFFFQQLISGVSYCHS 116
+ +++ PT + + + +L E ++ S D +F Q++ G+ Y HS
Sbjct: 88 IGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 146
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSK-SSVLHSQP---KSTVGTPAYIAPEVLT 172
+ HRDLK N LL+ T +KICDFG ++ + H V T Y APE++
Sbjct: 147 ANVLHRDLKPSNLLLN--TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 173 KKEYDGKIADVWSCGVTLYVML 194
+ K D+WS G L ML
Sbjct: 205 NSKGYTKSIDIWSVGCILAEML 226
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 91/202 (45%), Gaps = 13/202 (6%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE--RGQKIDEHVQREIMNHRSLKHPNI 60
RY + IG G +G+ D + +A+K I Q + REI +H NI
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGELFE----RICNAGRFSEDEARFFFQQLISGVSYCHS 116
+ +++ PT + + + +L E ++ S D +F Q++ G+ Y HS
Sbjct: 84 IGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 142
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSK-SSVLHSQP---KSTVGTPAYIAPEVLT 172
+ HRDLK N LL+ T +KICDFG ++ + H V T Y APE++
Sbjct: 143 ANVLHRDLKPSNLLLN--TTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 173 KKEYDGKIADVWSCGVTLYVML 194
+ K D+WS G L ML
Sbjct: 201 NSKGYTKSIDIWSVGCILAEML 222
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 91/202 (45%), Gaps = 13/202 (6%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE--RGQKIDEHVQREIMNHRSLKHPNI 60
RY + IG G +G+ D + +A+K I Q + REI +H NI
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGELFE----RICNAGRFSEDEARFFFQQLISGVSYCHS 116
+ +++ PT + + + +L E ++ S D +F Q++ G+ Y HS
Sbjct: 88 IGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIHS 146
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSK-SSVLHSQP---KSTVGTPAYIAPEVLT 172
+ HRDLK N LL+ T +KICDFG ++ + H V T Y APE++
Sbjct: 147 ANVLHRDLKPSNLLLN--TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 173 KKEYDGKIADVWSCGVTLYVML 194
+ K D+WS G L ML
Sbjct: 205 NSKGYTKSIDIWSVGCILAEML 226
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 108/223 (48%), Gaps = 24/223 (10%)
Query: 7 VKDIGSGNFGVAKLV----RDKWTRELLAVKFI--ERGQKIDEHVQREIMNHRSLKHPNI 60
++D+G G+FG L + T E++AVK + + G + ++EI R+L H +I
Sbjct: 36 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHI 95
Query: 61 VRFKEVL--LTPTHLAIVMEYAAGGELFERICNAGRFSEDEARF--FFQQLISGVSYCHS 116
+++K L +VMEY G L + + R S A+ F QQ+ G++Y H+
Sbjct: 96 IKYKGCCEDAGAASLQLVMEYVPLGSLRDYL---PRHSIGLAQLLLFAQQICEGMAYLHA 152
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQP---KSTVGTPAY-IAPEVLT 172
HRDL N LLD VKI DFG +K+ + + +P + APE L
Sbjct: 153 QHYIHRDLAARNVLLDNDRL--VKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECL- 209
Query: 173 KKEYDGKIA-DVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIG 214
KEY A DVWS GVTLY +L + P P F + IG
Sbjct: 210 -KEYKFYYASDVWSFGVTLYELLTHCDSSQSP--PTKFLELIG 249
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 126/302 (41%), Gaps = 45/302 (14%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKH 57
++RY+ +K IGSG G+ D +A+K + R + H +R E++ + + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFE-RICNAGRFSEDEAR--FFFQQLISGVSYC 114
NI+ V L + EL + + + D R + Q++ G+ +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHL 142
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKK 174
HS I HRDLK N ++ +KI DFG ++++ V T Y APEV+
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDAT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 175 EYDGKIADVWSCGVTLYVMLVGA--YPFED----------------PEDPKNFRKTI--- 213
Y + D+WS G + M+ G +P D PE K + T+
Sbjct: 201 GYKENV-DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTY 259
Query: 214 --GRILSVHYSF----PDYV---------RVSLECKHLLSRIFVANSEKRITIPEIKNHP 258
R YSF PD + + + + LLS++ V ++ KRI++ E HP
Sbjct: 260 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 259 WF 260
+
Sbjct: 320 YI 321
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 126/302 (41%), Gaps = 45/302 (14%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKH 57
++RY+ +K IGSG G+ D +A+K + R + H +R E++ + + H
Sbjct: 28 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 87
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFE-RICNAGRFSEDEAR--FFFQQLISGVSYC 114
NI+ V L + EL + +C + D R + Q++ G+ +
Sbjct: 88 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHL 147
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKK 174
HS I HRDLK N ++ +KI DFG ++++ V T Y APEV+
Sbjct: 148 HSAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 205
Query: 175 EYDGKIADVWSCGVTLYVMLVGA--YPFED----------------PEDPKNFRKTI--- 213
Y + D+WS G + M+ +P D PE K + T+
Sbjct: 206 GYKENV-DLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTY 264
Query: 214 --GRILSVHYS----FPDYV---------RVSLECKHLLSRIFVANSEKRITIPEIKNHP 258
R YS FPD + + + + LLS++ V ++ KRI++ E HP
Sbjct: 265 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 324
Query: 259 WF 260
+
Sbjct: 325 YI 326
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 24/208 (11%)
Query: 6 IVKDIGSGNFGVAKLVRDKWTREL-LAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRFK 64
+K++G+G FGV K KW + +A+K I+ G ++ E +L H +V+
Sbjct: 28 FLKELGTGQFGVVKY--GKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLY 85
Query: 65 EVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLI-------SGVSYCHSM 117
V + I+ EY A G C E RF QQL+ + Y S
Sbjct: 86 GVCTKQRPIFIITEYMANG------CLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK 139
Query: 118 QICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTP---AYIAPEVLTKK 174
Q HRDL N L++ VK+ DFG S+ VL + S+VG+ + PEVL
Sbjct: 140 QFLHRDLAARNCLVNDQGV--VKVSDFGLSR-YVLDDEETSSVGSKFPVRWSPPEVLMYS 196
Query: 175 EYDGKIADVWSCGVTLY-VMLVGAYPFE 201
++ K +D+W+ GV ++ + +G P+E
Sbjct: 197 KFSSK-SDIWAFGVLMWEIYSLGKMPYE 223
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 123/302 (40%), Gaps = 45/302 (14%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKH 57
++RY+ +K IGSG G+ D +A+K + R + H +R E++ + + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFE-RICNAGRFSEDEAR--FFFQQLISGVSYC 114
NI+ V L + EL + +C + D R + Q++ G+ +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHL 142
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKK 174
HS I HRDLK N ++ +KI DFG ++++ + V T Y APEV+
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGM 200
Query: 175 EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSF----------- 223
Y + D+WS G + M+ F + + K I ++ + +F
Sbjct: 201 GYKENV-DIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFMKKLQPTVRNY 259
Query: 224 ----PDYVRVSLE---------------------CKHLLSRIFVANSEKRITIPEIKNHP 258
P Y S E + LLS++ V ++ KRI++ E HP
Sbjct: 260 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 259 WF 260
+
Sbjct: 320 YI 321
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 121/302 (40%), Gaps = 45/302 (14%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKH 57
++RY+ +K IGSG G+ D +A+K + R + H +R E++ + + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFE-RICNAGRFSEDEAR--FFFQQLISGVSYC 114
NI+ V L + EL + + + D R + Q++ G+ +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHL 142
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKK 174
HS I HRDLK N ++ +KI DFG ++++ V T Y APEV+
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 175 EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSF----------- 223
Y + D+WS G + M+ G F + + K I ++ + F
Sbjct: 201 GYKENV-DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTY 259
Query: 224 ----PDYVRVSLE---------------------CKHLLSRIFVANSEKRITIPEIKNHP 258
P Y S E + LLS++ V ++ KRI++ E HP
Sbjct: 260 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 259 WF 260
+
Sbjct: 320 YI 321
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 125/289 (43%), Gaps = 49/289 (16%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIER---GQKIDEHVQREIMNHRSLKHPNIVRFKEV 66
+GSG +G DK + E +A+K + R + + RE++ + ++H N++ +V
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 67 LLTPTHLA------IVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQIC 120
+ L +VM + ++I FSE++ ++ Q++ G+ Y HS +
Sbjct: 110 FTPASSLRNFYDFYLVMPFMQTD--LQKIMGM-EFSEEKIQYLVYQMLKGLKYIHSAGVV 166
Query: 121 HRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKI 180
HRDLK N ++ +KI DFG ++ + ++ V T Y APEV+ + +
Sbjct: 167 HRDLKPGNLAVNEDC--ELKILDFGLARHA--DAEMTGYVVTRWYRAPEVILSWMHYNQT 222
Query: 181 ADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVH-------------------- 220
D+WS G + ML G F+ K++ + +IL V
Sbjct: 223 VDIWSVGCIMAEMLTGKTLFKG----KDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYI 278
Query: 221 YSFPD---------YVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWF 260
S P + R S + LL ++ + +KR+T + HP+F
Sbjct: 279 QSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF 327
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 126/302 (41%), Gaps = 45/302 (14%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKH 57
++RY+ +K IGSG G+ D +A+K + R + H +R E++ + + H
Sbjct: 17 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFE-RICNAGRFSEDEAR--FFFQQLISGVSYC 114
NI+ V L + EL + +C + D R + Q++ G+ +
Sbjct: 77 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHL 136
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKK 174
HS I HRDLK N ++ +KI DFG ++++ V T Y APEV+
Sbjct: 137 HSAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 194
Query: 175 EYDGKIADVWSCGVTLYVMLVGA--YPFED----------------PEDPKNFRKTI--- 213
Y + D+WS G + M+ +P D PE K + T+
Sbjct: 195 GYKENV-DLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTY 253
Query: 214 --GRILSVHYS----FPDYV---------RVSLECKHLLSRIFVANSEKRITIPEIKNHP 258
R YS FPD + + + + LLS++ V ++ KRI++ E HP
Sbjct: 254 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 313
Query: 259 WF 260
+
Sbjct: 314 YI 315
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 117/301 (38%), Gaps = 46/301 (15%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVK-FIERGQKIDEHVQREIMNHRSLKHPNIV 61
RY +K +G G G+ D + +A+K + + +H REI R L H NIV
Sbjct: 12 RYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIV 71
Query: 62 RFKEVL-------------LTPTH-LAIVMEYAAGGELFERICNAGRFSEDEARFFFQQL 107
+ E+L LT + + IV EY + G E+ AR F QL
Sbjct: 72 KVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETD--LANVLEQGPLLEEHARLFMYQL 129
Query: 108 ISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVG----TP 163
+ G+ Y HS + HRDLK N ++ +KI DFG ++ H K + T
Sbjct: 130 LRGLKYIHSANVLHRDLKPANLFINTEDL-VLKIGDFGLARIMDPHYSHKGHLSEGLVTK 188
Query: 164 AYIAPEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYS- 222
Y +P +L K D+W+ G ML G F + + + + I VH
Sbjct: 189 WYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEED 248
Query: 223 -------FPDYVR----------------VSLECKHLLSRIFVANSEKRITIPEIKNHPW 259
P Y+R +S E L +I + R+T E +HP+
Sbjct: 249 RQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPY 308
Query: 260 F 260
Sbjct: 309 M 309
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 91/202 (45%), Gaps = 13/202 (6%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE--RGQKIDEHVQREIMNHRSLKHPNI 60
RY + IG G +G+ D + +A+K I Q + REI +H NI
Sbjct: 32 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 91
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGELFE----RICNAGRFSEDEARFFFQQLISGVSYCHS 116
+ +++ PT + + + +L E ++ S D +F Q++ G+ Y HS
Sbjct: 92 IGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 150
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSK-SSVLHSQP---KSTVGTPAYIAPEVLT 172
+ HRDLK N LL+ T +KICDFG ++ + H V T Y APE++
Sbjct: 151 ANVLHRDLKPSNLLLN--TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 208
Query: 173 KKEYDGKIADVWSCGVTLYVML 194
+ K D+WS G L ML
Sbjct: 209 NSKGYTKSIDIWSVGCILAEML 230
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 91/202 (45%), Gaps = 13/202 (6%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE--RGQKIDEHVQREIMNHRSLKHPNI 60
RY + IG G +G+ D + +A+K I Q + REI +H NI
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGELFE----RICNAGRFSEDEARFFFQQLISGVSYCHS 116
+ +++ PT + + + +L E ++ S D +F Q++ G+ Y HS
Sbjct: 84 IGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 142
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSK-SSVLHSQP---KSTVGTPAYIAPEVLT 172
+ HRDLK N LL+ T +KICDFG ++ + H V T Y APE++
Sbjct: 143 ANVLHRDLKPSNLLLN--TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 173 KKEYDGKIADVWSCGVTLYVML 194
+ K D+WS G L ML
Sbjct: 201 NSKGYTKSIDIWSVGCILAEML 222
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 126/268 (47%), Gaps = 19/268 (7%)
Query: 5 EIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMN----HRSLKHPNI 60
E + ++G G +GV + +R + +++AVK I R + +R +M+ R++ P
Sbjct: 54 EPIMELGRGAYGVVEKMRHVPSGQIMAVKRI-RATVNSQEQKRLLMDLDISMRTVDCPFT 112
Query: 61 VRFKEVLLTPTHLAIVMEY--AAGGELFERICNAGR-FSEDEARFFFQQLISGVSYCHS- 116
V F L + I ME + + ++++ + G+ ED ++ + + HS
Sbjct: 113 VTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK 172
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEV----LT 172
+ + HRD+K N L++ +VK+CDFG S V G Y+APE L
Sbjct: 173 LSVIHRDVKPSNVLINA--LGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELN 230
Query: 173 KKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLE 232
+K Y K +D+WS G+T+ + + +P++ P F++ + P + S E
Sbjct: 231 QKGYSVK-SDIWSLGITMIELAILRFPYDSWGTP--FQQLKQVVEEPSPQLP-ADKFSAE 286
Query: 233 CKHLLSRIFVANSEKRITIPEIKNHPWF 260
S+ NS++R T PE+ HP+F
Sbjct: 287 FVDFTSQCLKKNSKERPTYPELMQHPFF 314
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 91/202 (45%), Gaps = 13/202 (6%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE--RGQKIDEHVQREIMNHRSLKHPNI 60
RY + IG G +G+ D + +A+K I Q + REI +H NI
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 103
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGELFE----RICNAGRFSEDEARFFFQQLISGVSYCHS 116
+ +++ PT + + + +L E ++ S D +F Q++ G+ Y HS
Sbjct: 104 IGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 162
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSK-SSVLHSQP---KSTVGTPAYIAPEVLT 172
+ HRDLK N LL+ T +KICDFG ++ + H V T Y APE++
Sbjct: 163 ANVLHRDLKPSNLLLN--TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 220
Query: 173 KKEYDGKIADVWSCGVTLYVML 194
+ K D+WS G L ML
Sbjct: 221 NSKGYTKSIDIWSVGCILAEML 242
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 104/217 (47%), Gaps = 27/217 (12%)
Query: 5 EIVKDIGSGNFGV---AKLVRDKWTRELLAVKFIERGQKIDE--------HVQREIMNHR 53
E K IG G FG+ +LV+DK ++A+K + G E QRE+
Sbjct: 22 EYEKQIGKGGFGLVHKGRLVKDK---SVVAIKSLILGDSEGETEMIEKFQEFQREVFIMS 78
Query: 54 SLKHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLIS-GVS 112
+L HPNIV+ ++ P + VME+ G+L+ R+ + + + I+ G+
Sbjct: 79 NLNHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIE 136
Query: 113 YCHSMQ--ICHRDLKLENTL---LDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIA 167
Y + I HRDL+ N LD + K+ DFG S+ SV HS +G ++A
Sbjct: 137 YMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSV-HSV-SGLLGNFQWMA 194
Query: 168 PEVLTKKE--YDGKIADVWSCGVTLYVMLVGAYPFED 202
PE + +E Y K AD +S + LY +L G PF++
Sbjct: 195 PETIGAEEESYTEK-ADTYSFAMILYTILTGEGPFDE 230
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 91/202 (45%), Gaps = 13/202 (6%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE--RGQKIDEHVQREIMNHRSLKHPNI 60
RY + IG G +G+ D + +A+K I Q + REI +H NI
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 85
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGELFE----RICNAGRFSEDEARFFFQQLISGVSYCHS 116
+ +++ PT + + + +L E ++ S D +F Q++ G+ Y HS
Sbjct: 86 IGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 144
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSK-SSVLHSQP---KSTVGTPAYIAPEVLT 172
+ HRDLK N LL+ T +KICDFG ++ + H V T Y APE++
Sbjct: 145 ANVLHRDLKPSNLLLN--TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 173 KKEYDGKIADVWSCGVTLYVML 194
+ K D+WS G L ML
Sbjct: 203 NSKGYTKSIDIWSVGCILAEML 224
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 126/268 (47%), Gaps = 19/268 (7%)
Query: 5 EIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMN----HRSLKHPNI 60
E + ++G G +GV + +R + +++AVK I R + +R +M+ R++ P
Sbjct: 10 EPIMELGRGAYGVVEKMRHVPSGQIMAVKRI-RATVNSQEQKRLLMDLDISMRTVDCPFT 68
Query: 61 VRFKEVLLTPTHLAIVMEY--AAGGELFERICNAGR-FSEDEARFFFQQLISGVSYCHS- 116
V F L + I ME + + ++++ + G+ ED ++ + + HS
Sbjct: 69 VTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK 128
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPE----VLT 172
+ + HRD+K N L++ +VK+CDFG S V G Y+APE L
Sbjct: 129 LSVIHRDVKPSNVLINA--LGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELN 186
Query: 173 KKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLE 232
+K Y K +D+WS G+T+ + + +P++ P F++ + P + S E
Sbjct: 187 QKGYSVK-SDIWSLGITMIELAILRFPYDSWGTP--FQQLKQVVEEPSPQLP-ADKFSAE 242
Query: 233 CKHLLSRIFVANSEKRITIPEIKNHPWF 260
S+ NS++R T PE+ HP+F
Sbjct: 243 FVDFTSQCLKKNSKERPTYPELMQHPFF 270
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 123/294 (41%), Gaps = 39/294 (13%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRD-KWTRELLAVKFI-----ERGQKIDEHVQREIMNH-RS 54
++YE V +IG G +G RD K +A+K + E G + + ++ H +
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET 70
Query: 55 LKHPNIVRFKEVLLTP-----THLAIVMEYAAGG--ELFERICNAGRFSEDEARFFFQQL 107
+HPN+VR +V T L +V E+ +++ G +E FQ L
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ-L 129
Query: 108 ISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIA 167
+ G+ + HS ++ HRDLK +N L+ +++ ++K+ DFG ++ S V T Y A
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILV--TSSGQIKLADFGLARIYSFQMALTSVVVTLWYRA 187
Query: 168 PEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRI-LSVHYSFPDY 226
PEVL + Y + D+WS G M F D K + I L +P
Sbjct: 188 PEVLLQSSYATPV-DLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRD 246
Query: 227 VRVSLECKH--------------------LLSRIFVANSEKRITIPEIKNHPWF 260
V + + H LL + N KRI+ +HP+F
Sbjct: 247 VALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 300
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 123/294 (41%), Gaps = 39/294 (13%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRD-KWTRELLAVKFI-----ERGQKIDEHVQREIMNH-RS 54
++YE V +IG G +G RD K +A+K + E G + + ++ H +
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET 70
Query: 55 LKHPNIVRFKEVLLTP-----THLAIVMEYAAGG--ELFERICNAGRFSEDEARFFFQQL 107
+HPN+VR +V T L +V E+ +++ G +E FQ L
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ-L 129
Query: 108 ISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIA 167
+ G+ + HS ++ HRDLK +N L+ +++ ++K+ DFG ++ S V T Y A
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILV--TSSGQIKLADFGLARIYSFQMALTSVVVTLWYRA 187
Query: 168 PEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRI-LSVHYSFPDY 226
PEVL + Y + D+WS G M F D K + I L +P
Sbjct: 188 PEVLLQSSYATPV-DLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRD 246
Query: 227 VRVSLECKH--------------------LLSRIFVANSEKRITIPEIKNHPWF 260
V + + H LL + N KRI+ +HP+F
Sbjct: 247 VALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 300
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 121/302 (40%), Gaps = 45/302 (14%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKH 57
++RY+ +K IGSG G+ D +A+K + R + H +R E++ + + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFE-RICNAGRFSEDEAR--FFFQQLISGVSYC 114
NI+ V L + EL + + + D R + Q++ G+ +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHL 142
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKK 174
HS I HRDLK N ++ +KI DFG ++++ V T Y APEV+
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDAT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 175 EYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSF----------- 223
Y + D+WS G + M+ G F + + K I ++ + F
Sbjct: 201 GYKENV-DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTY 259
Query: 224 ----PDYVRVSLE---------------------CKHLLSRIFVANSEKRITIPEIKNHP 258
P Y S E + LLS++ V ++ KRI++ E HP
Sbjct: 260 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 259 WF 260
+
Sbjct: 320 YI 321
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 91/202 (45%), Gaps = 13/202 (6%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE--RGQKIDEHVQREIMNHRSLKHPNI 60
RY + IG G +G+ D + +A+K I Q + REI +H NI
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGELFE----RICNAGRFSEDEARFFFQQLISGVSYCHS 116
+ +++ PT + + + +L E ++ S D +F Q++ G+ Y HS
Sbjct: 84 IGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 142
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSK-SSVLHSQP---KSTVGTPAYIAPEVLT 172
+ HRDLK N LL+ T +KICDFG ++ + H V T Y APE++
Sbjct: 143 ANVLHRDLKPSNLLLN--TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 173 KKEYDGKIADVWSCGVTLYVML 194
+ K D+WS G L ML
Sbjct: 201 NSKGYTKSIDIWSVGCILAEML 222
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 123/294 (41%), Gaps = 39/294 (13%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRD-KWTRELLAVKFI-----ERGQKIDEHVQREIMNH-RS 54
++YE V +IG G +G RD K +A+K + E G + + ++ H +
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET 70
Query: 55 LKHPNIVRFKEVLLTP-----THLAIVMEYAAGG--ELFERICNAGRFSEDEARFFFQQL 107
+HPN+VR +V T L +V E+ +++ G +E FQ L
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ-L 129
Query: 108 ISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIA 167
+ G+ + HS ++ HRDLK +N L+ +++ ++K+ DFG ++ S V T Y A
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILV--TSSGQIKLADFGLARIYSFQMALTSVVVTLWYRA 187
Query: 168 PEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRI-LSVHYSFPDY 226
PEVL + Y + D+WS G M F D K + I L +P
Sbjct: 188 PEVLLQSSYATPV-DLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRD 246
Query: 227 VRVSLECKH--------------------LLSRIFVANSEKRITIPEIKNHPWF 260
V + + H LL + N KRI+ +HP+F
Sbjct: 247 VALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 300
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 104/217 (47%), Gaps = 27/217 (12%)
Query: 5 EIVKDIGSGNFGV---AKLVRDKWTRELLAVKFIERGQKIDE--------HVQREIMNHR 53
E K IG G FG+ +LV+DK ++A+K + G E QRE+
Sbjct: 22 EYEKQIGKGGFGLVHKGRLVKDK---SVVAIKSLILGDSEGETEMIEKFQEFQREVFIMS 78
Query: 54 SLKHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLIS-GVS 112
+L HPNIV+ ++ P + VME+ G+L+ R+ + + + I+ G+
Sbjct: 79 NLNHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIE 136
Query: 113 YCHSMQ--ICHRDLKLENTL---LDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIA 167
Y + I HRDL+ N LD + K+ DFG S+ SV HS +G ++A
Sbjct: 137 YMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSV-HSV-SGLLGNFQWMA 194
Query: 168 PEVLTKKE--YDGKIADVWSCGVTLYVMLVGAYPFED 202
PE + +E Y K AD +S + LY +L G PF++
Sbjct: 195 PETIGAEEESYTEK-ADTYSFAMILYTILTGEGPFDE 230
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 115/259 (44%), Gaps = 25/259 (9%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQ---REIMNHRSLKHPNIVRFKEV 66
IGSG+FG + + KW ++ AVK + + +Q E+ R +H NI+ F
Sbjct: 16 IGSGSFGT--VYKGKWHGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 67 LLTPTHLAIVMEYAAGGELFERI-CNAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLK 125
P LAIV ++ G L+ + +F + +Q G+ Y H+ I HRDLK
Sbjct: 73 STKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLK 131
Query: 126 LENTLLDGSTAPRVKICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVL---TKKEYDGK 179
N L VKI DFG + S Q + G+ ++APEV+ K Y +
Sbjct: 132 SNNIFLHEDLT--VKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 189
Query: 180 IADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLEC----KH 235
+DV++ G+ LY ++ G P+ + + +GR Y PD +V C K
Sbjct: 190 -SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR----GYLSPDLSKVRSNCPKAMKR 244
Query: 236 LLSRIFVANSEKRITIPEI 254
L++ ++R P+I
Sbjct: 245 LMAECLKKKRDERPLFPQI 263
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 104/228 (45%), Gaps = 19/228 (8%)
Query: 6 IVKDIGSGNFGVAKLVRDKW-TRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRFK 64
V++IGSG FG+ L W ++ +A+K I G +E E L HP +V+
Sbjct: 14 FVQEIGSGQFGLVHL--GYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLY 71
Query: 65 EVLLTPTHLAIVMEYAAGGELFERI-CNAGRFSEDEARFFFQQLISGVSYCHSMQICHRD 123
V L + +V E+ G L + + G F+ + + G++Y + HRD
Sbjct: 72 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRD 131
Query: 124 LKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTP---AYIAPEVLTKKEYDGKI 180
L N L+ + +K+ DFG ++ VL Q S+ GT + +PEV + Y K
Sbjct: 132 LAARNCLVGENQV--IKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK- 187
Query: 181 ADVWSCGVTLY-VMLVGAYPFEDPEDPK-------NFRKTIGRILSVH 220
+DVWS GV ++ V G P+E+ + + FR R+ S H
Sbjct: 188 SDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTH 235
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 24/208 (11%)
Query: 6 IVKDIGSGNFGVAKLVRDKWTREL-LAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRFK 64
+K++G+G FGV K KW + +A+K I+ G ++ E +L H +V+
Sbjct: 8 FLKELGTGQFGVVKY--GKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLY 65
Query: 65 EVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLI-------SGVSYCHSM 117
V + I+ EY A G C E RF QQL+ + Y S
Sbjct: 66 GVCTKQRPIFIITEYMANG------CLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK 119
Query: 118 QICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTP---AYIAPEVLTKK 174
Q HRDL N L++ VK+ DFG S+ VL + S+VG+ + PEVL
Sbjct: 120 QFLHRDLAARNCLVNDQGV--VKVSDFGLSR-YVLDDEYTSSVGSKFPVRWSPPEVLMYS 176
Query: 175 EYDGKIADVWSCGVTLY-VMLVGAYPFE 201
++ K +D+W+ GV ++ + +G P+E
Sbjct: 177 KFSSK-SDIWAFGVLMWEIYSLGKMPYE 203
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 115/259 (44%), Gaps = 25/259 (9%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQ---REIMNHRSLKHPNIVRFKEV 66
IGSG+FG + + KW ++ AVK + + +Q E+ R +H NI+ F
Sbjct: 16 IGSGSFGT--VYKGKWHGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 67 LLTPTHLAIVMEYAAGGELFERI-CNAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLK 125
P LAIV ++ G L+ + +F + +Q G+ Y H+ I HRDLK
Sbjct: 73 STAP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLK 131
Query: 126 LENTLLDGSTAPRVKICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVL---TKKEYDGK 179
N L VKI DFG + S Q + G+ ++APEV+ K Y +
Sbjct: 132 SNNIFLHEDLT--VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 189
Query: 180 IADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLEC----KH 235
+DV++ G+ LY ++ G P+ + + +GR Y PD +V C K
Sbjct: 190 -SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR----GYLSPDLSKVRSNCPKAMKR 244
Query: 236 LLSRIFVANSEKRITIPEI 254
L++ ++R P+I
Sbjct: 245 LMAECLKKKRDERPLFPQI 263
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 104/228 (45%), Gaps = 19/228 (8%)
Query: 6 IVKDIGSGNFGVAKLVRDKW-TRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRFK 64
V++IGSG FG+ L W ++ +A+K I G +E E L HP +V+
Sbjct: 9 FVQEIGSGQFGLVHL--GYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLY 66
Query: 65 EVLLTPTHLAIVMEYAAGGELFERI-CNAGRFSEDEARFFFQQLISGVSYCHSMQICHRD 123
V L + +V E+ G L + + G F+ + + G++Y + HRD
Sbjct: 67 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRD 126
Query: 124 LKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTP---AYIAPEVLTKKEYDGKI 180
L N L+ + +K+ DFG ++ VL Q S+ GT + +PEV + Y K
Sbjct: 127 LAARNCLVGENQV--IKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK- 182
Query: 181 ADVWSCGVTLY-VMLVGAYPFEDPEDPK-------NFRKTIGRILSVH 220
+DVWS GV ++ V G P+E+ + + FR R+ S H
Sbjct: 183 SDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTH 230
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 24/208 (11%)
Query: 6 IVKDIGSGNFGVAKLVRDKWTREL-LAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRFK 64
+K++G+G FGV K KW + +A+K I+ G ++ E +L H +V+
Sbjct: 13 FLKELGTGQFGVVKY--GKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLY 70
Query: 65 EVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLI-------SGVSYCHSM 117
V + I+ EY A G C E RF QQL+ + Y S
Sbjct: 71 GVCTKQRPIFIITEYMANG------CLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK 124
Query: 118 QICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTP---AYIAPEVLTKK 174
Q HRDL N L++ VK+ DFG S+ VL + S+VG+ + PEVL
Sbjct: 125 QFLHRDLAARNCLVNDQGV--VKVSDFGLSR-YVLDDEYTSSVGSKFPVRWSPPEVLMYS 181
Query: 175 EYDGKIADVWSCGVTLY-VMLVGAYPFE 201
++ K +D+W+ GV ++ + +G P+E
Sbjct: 182 KFSSK-SDIWAFGVLMWEIYSLGKMPYE 208
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 24/208 (11%)
Query: 6 IVKDIGSGNFGVAKLVRDKWTREL-LAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRFK 64
+K++G+G FGV K KW + +A+K I+ G ++ E +L H +V+
Sbjct: 12 FLKELGTGQFGVVKY--GKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLY 69
Query: 65 EVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLI-------SGVSYCHSM 117
V + I+ EY A G C E RF QQL+ + Y S
Sbjct: 70 GVCTKQRPIFIITEYMANG------CLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK 123
Query: 118 QICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTP---AYIAPEVLTKK 174
Q HRDL N L++ VK+ DFG S+ VL + S+VG+ + PEVL
Sbjct: 124 QFLHRDLAARNCLVNDQGV--VKVSDFGLSR-YVLDDEYTSSVGSKFPVRWSPPEVLMYS 180
Query: 175 EYDGKIADVWSCGVTLY-VMLVGAYPFE 201
++ K +D+W+ GV ++ + +G P+E
Sbjct: 181 KFSSK-SDIWAFGVLMWEIYSLGKMPYE 207
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 115/258 (44%), Gaps = 23/258 (8%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQ---REIMNHRSLKHPNIVRFKEV 66
IGSG+FG + + KW ++ AVK + + +Q E+ R +H NI+ F
Sbjct: 36 IGSGSFGT--VYKGKWHGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 92
Query: 67 LLTPTHLAIVMEYAAGGELFERI-CNAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLK 125
P LAIV ++ G L+ + +F + +Q G+ Y H+ I HRDLK
Sbjct: 93 STKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLK 151
Query: 126 LENTLLDGSTAPRVKICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVLTKKEYD--GKI 180
N L VKI DFG + S Q + G+ ++APEV+ ++ +
Sbjct: 152 SNNIFLHEDLT--VKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 209
Query: 181 ADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLEC----KHL 236
+DV++ G+ LY ++ G P+ + + +GR Y PD +V C K L
Sbjct: 210 SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR----GYLSPDLSKVRSNCPKAMKRL 265
Query: 237 LSRIFVANSEKRITIPEI 254
++ ++R P+I
Sbjct: 266 MAECLKKKRDERPLFPQI 283
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 24/208 (11%)
Query: 6 IVKDIGSGNFGVAKLVRDKWTREL-LAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRFK 64
+K++G+G FGV K KW + +A+K I+ G ++ E +L H +V+
Sbjct: 28 FLKELGTGQFGVVKY--GKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLY 85
Query: 65 EVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLI-------SGVSYCHSM 117
V + I+ EY A G C E RF QQL+ + Y S
Sbjct: 86 GVCTKQRPIFIITEYMANG------CLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK 139
Query: 118 QICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTP---AYIAPEVLTKK 174
Q HRDL N L++ VK+ DFG S+ VL + S+VG+ + PEVL
Sbjct: 140 QFLHRDLAARNCLVNDQGV--VKVSDFGLSR-YVLDDEYTSSVGSKFPVRWSPPEVLMYS 196
Query: 175 EYDGKIADVWSCGVTLY-VMLVGAYPFE 201
++ K +D+W+ GV ++ + +G P+E
Sbjct: 197 KFSSK-SDIWAFGVLMWEIYSLGKMPYE 223
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 91/202 (45%), Gaps = 13/202 (6%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE--RGQKIDEHVQREIMNHRSLKHPNI 60
RY + IG G +G+ D + +A++ I Q + REI +H NI
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGELFE----RICNAGRFSEDEARFFFQQLISGVSYCHS 116
+ +++ PT + + + +L E ++ S D +F Q++ G+ Y HS
Sbjct: 88 IGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 146
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSK-SSVLHSQP---KSTVGTPAYIAPEVLT 172
+ HRDLK N LL+ T +KICDFG ++ + H V T Y APE++
Sbjct: 147 ANVLHRDLKPSNLLLN--TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 173 KKEYDGKIADVWSCGVTLYVML 194
+ K D+WS G L ML
Sbjct: 205 NSKGYTKSIDIWSVGCILAEML 226
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 104/228 (45%), Gaps = 19/228 (8%)
Query: 6 IVKDIGSGNFGVAKLVRDKW-TRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRFK 64
V++IGSG FG+ L W ++ +A+K I G +E E L HP +V+
Sbjct: 11 FVQEIGSGQFGLVHL--GYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLY 68
Query: 65 EVLLTPTHLAIVMEYAAGGELFERI-CNAGRFSEDEARFFFQQLISGVSYCHSMQICHRD 123
V L + +V E+ G L + + G F+ + + G++Y + HRD
Sbjct: 69 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRD 128
Query: 124 LKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTP---AYIAPEVLTKKEYDGKI 180
L N L+ + +K+ DFG ++ VL Q S+ GT + +PEV + Y K
Sbjct: 129 LAARNCLVGENQV--IKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK- 184
Query: 181 ADVWSCGVTLY-VMLVGAYPFEDPEDPK-------NFRKTIGRILSVH 220
+DVWS GV ++ V G P+E+ + + FR R+ S H
Sbjct: 185 SDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTH 232
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 24/208 (11%)
Query: 6 IVKDIGSGNFGVAKLVRDKWTREL-LAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRFK 64
+K++G+G FGV K KW + +A+K I+ G ++ E +L H +V+
Sbjct: 19 FLKELGTGQFGVVKY--GKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLY 76
Query: 65 EVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLI-------SGVSYCHSM 117
V + I+ EY A G C E RF QQL+ + Y S
Sbjct: 77 GVCTKQRPIFIITEYMANG------CLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK 130
Query: 118 QICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTP---AYIAPEVLTKK 174
Q HRDL N L++ VK+ DFG S+ VL + S+VG+ + PEVL
Sbjct: 131 QFLHRDLAARNCLVNDQGV--VKVSDFGLSR-YVLDDEYTSSVGSKFPVRWSPPEVLMYS 187
Query: 175 EYDGKIADVWSCGVTLY-VMLVGAYPFE 201
++ K +D+W+ GV ++ + +G P+E
Sbjct: 188 KFSSK-SDIWAFGVLMWEIYSLGKMPYE 214
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 123/293 (41%), Gaps = 44/293 (15%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIER---GQKIDEHVQREIMNHRSLKHPNI 60
Y ++ +GSG +G D T +A+K + R + + RE+ + ++H N+
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86
Query: 61 VRFKEVLLTP-------THLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
+ +V TP T +VM + G ++ + ED +F Q++ G+ Y
Sbjct: 87 IGLLDVF-TPDETLDDFTDFYLVMPFM--GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRY 143
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTK 173
H+ I HRDLK N ++ +KI DFG ++ + S+ V T Y APEV+
Sbjct: 144 IHAAGIIHRDLKPGNLAVNEDC--ELKILDFGLARQA--DSEMXGXVVTRWYRAPEVILN 199
Query: 174 KEYDGKIADVWSCGVTLYVMLVGAYPFE--------------------------DPEDPK 207
+ D+WS G + M+ G F+ ++ K
Sbjct: 200 WMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAK 259
Query: 208 NFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWF 260
N+ K + + ++ S +LL ++ V ++E+R+T E HP+F
Sbjct: 260 NYMKGLPELEKKDFA-SILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYF 311
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 115/258 (44%), Gaps = 23/258 (8%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQ---REIMNHRSLKHPNIVRFKEV 66
IGSG+FG + + KW ++ AVK + + +Q E+ R +H NI+ F
Sbjct: 44 IGSGSFGT--VYKGKWHGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 67 LLTPTHLAIVMEYAAGGELFERI-CNAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLK 125
P LAIV ++ G L+ + +F + +Q G+ Y H+ I HRDLK
Sbjct: 101 STKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLK 159
Query: 126 LENTLLDGSTAPRVKICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVLTKKEYD--GKI 180
N L VKI DFG + S Q + G+ ++APEV+ ++ +
Sbjct: 160 SNNIFLHEDLT--VKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 217
Query: 181 ADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLEC----KHL 236
+DV++ G+ LY ++ G P+ + + +GR Y PD +V C K L
Sbjct: 218 SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR----GYLSPDLSKVRSNCPKAMKRL 273
Query: 237 LSRIFVANSEKRITIPEI 254
++ ++R P+I
Sbjct: 274 MAECLKKKRDERPLFPQI 291
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 115/259 (44%), Gaps = 25/259 (9%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQ---REIMNHRSLKHPNIVRFKEV 66
IGSG+FG + + KW ++ AVK + + +Q E+ R +H NI+ F
Sbjct: 16 IGSGSFGT--VYKGKWHGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 67 LLTPTHLAIVMEYAAGGELFERI-CNAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLK 125
P LAIV ++ G L+ + +F + +Q G+ Y H+ I HRDLK
Sbjct: 73 STKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLK 131
Query: 126 LENTLLDGSTAPRVKICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVL---TKKEYDGK 179
N L VKI DFG + S Q + G+ ++APEV+ K Y +
Sbjct: 132 SNNIFLHEDLT--VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 189
Query: 180 IADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLEC----KH 235
+DV++ G+ LY ++ G P+ + + +GR Y PD +V C K
Sbjct: 190 -SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR----GYLSPDLSKVRSNCPKAMKR 244
Query: 236 LLSRIFVANSEKRITIPEI 254
L++ ++R P+I
Sbjct: 245 LMAECLKKKRDERPLFPQI 263
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 117/260 (45%), Gaps = 27/260 (10%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQ---REIMNHRSLKHPNIVRFKEV 66
IGSG+FG + + KW ++ AVK + + +Q E+ R +H NI+ F
Sbjct: 21 IGSGSFGT--VYKGKWHGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 67 LLTPTHLAIVMEYAAGGELFERI-CNAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLK 125
P LAIV ++ G L+ + +F + +Q G+ Y H+ I HRDLK
Sbjct: 78 STKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLK 136
Query: 126 LENTLLDGSTAPRVKICDFGY----SKSSVLHSQPKSTVGTPAYIAPEVL---TKKEYDG 178
N L VKI DFG S+ S H Q + G+ ++APEV+ K Y
Sbjct: 137 SNNIFLHEDLT--VKIGDFGLATVKSRWSGSH-QFEQLSGSILWMAPEVIRMQDKNPYSF 193
Query: 179 KIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLEC----K 234
+ +DV++ G+ LY ++ G P+ + + +GR Y PD +V C K
Sbjct: 194 Q-SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR----GYLSPDLSKVRSNCPKAMK 248
Query: 235 HLLSRIFVANSEKRITIPEI 254
L++ ++R P+I
Sbjct: 249 RLMAECLKKKRDERPLFPQI 268
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 104/228 (45%), Gaps = 19/228 (8%)
Query: 6 IVKDIGSGNFGVAKLVRDKW-TRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRFK 64
V++IGSG FG+ L W ++ +A+K I G +E E L HP +V+
Sbjct: 12 FVQEIGSGQFGLVHL--GYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLY 69
Query: 65 EVLLTPTHLAIVMEYAAGGELFERI-CNAGRFSEDEARFFFQQLISGVSYCHSMQICHRD 123
V L + +V E+ G L + + G F+ + + G++Y + HRD
Sbjct: 70 GVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRD 129
Query: 124 LKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTP---AYIAPEVLTKKEYDGKI 180
L N L+ + +K+ DFG ++ VL Q S+ GT + +PEV + Y K
Sbjct: 130 LAARNCLVGENQV--IKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK- 185
Query: 181 ADVWSCGVTLY-VMLVGAYPFEDPEDPK-------NFRKTIGRILSVH 220
+DVWS GV ++ V G P+E+ + + FR R+ S H
Sbjct: 186 SDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTH 233
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 109/223 (48%), Gaps = 24/223 (10%)
Query: 7 VKDIGSGNFGVAKLV----RDKWTRELLAVKFIER--GQKIDEHVQREIMNHRSLKHPNI 60
++D+G G+FG L + T E++AVK ++ G + ++EI R+L H +I
Sbjct: 19 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 61 VRFKEVL--LTPTHLAIVMEYAAGGELFERICNAGRFSEDEARF--FFQQLISGVSYCHS 116
+++K L +VMEY G L + + R S A+ F QQ+ G++Y HS
Sbjct: 79 IKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL---PRHSIGLAQLLLFAQQICEGMAYLHS 135
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKS---SVLHSQPKSTVGTPAY-IAPEVLT 172
HR+L N LLD VKI DFG +K+ + + + +P + APE L
Sbjct: 136 QHYIHRNLAARNVLLDNDRL--VKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL- 192
Query: 173 KKEYDGKIA-DVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIG 214
KEY A DVWS GVTLY +L + P P F + IG
Sbjct: 193 -KEYKFYYASDVWSFGVTLYELLTHCDSSQSP--PTKFLELIG 232
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 115/259 (44%), Gaps = 25/259 (9%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQ---REIMNHRSLKHPNIVRFKEV 66
IGSG+FG + + KW ++ AVK + + +Q E+ R +H NI+ F
Sbjct: 18 IGSGSFGT--VYKGKWHGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 74
Query: 67 LLTPTHLAIVMEYAAGGELFERI-CNAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLK 125
P LAIV ++ G L+ + +F + +Q G+ Y H+ I HRDLK
Sbjct: 75 STKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLK 133
Query: 126 LENTLLDGSTAPRVKICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVL---TKKEYDGK 179
N L VKI DFG + S Q + G+ ++APEV+ K Y +
Sbjct: 134 SNNIFLHEDLT--VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 191
Query: 180 IADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLEC----KH 235
+DV++ G+ LY ++ G P+ + + +GR Y PD +V C K
Sbjct: 192 -SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR----GYLSPDLSKVRSNCPKAMKR 246
Query: 236 LLSRIFVANSEKRITIPEI 254
L++ ++R P+I
Sbjct: 247 LMAECLKKKRDERPLFPQI 265
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 117/260 (45%), Gaps = 27/260 (10%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQ---REIMNHRSLKHPNIVRFKEV 66
IGSG+FG + + KW ++ AVK + + +Q E+ R +H NI+ F
Sbjct: 21 IGSGSFGT--VYKGKWHGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 67 LLTPTHLAIVMEYAAGGELFERI-CNAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLK 125
P LAIV ++ G L+ + +F + +Q G+ Y H+ I HRDLK
Sbjct: 78 STKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLK 136
Query: 126 LENTLLDGSTAPRVKICDFGY----SKSSVLHSQPKSTVGTPAYIAPEVL---TKKEYDG 178
N L VKI DFG S+ S H Q + G+ ++APEV+ K Y
Sbjct: 137 SNNIFLHEDLT--VKIGDFGLATVKSRWSGSH-QFEQLSGSILWMAPEVIRMQDKNPYSF 193
Query: 179 KIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLEC----K 234
+ +DV++ G+ LY ++ G P+ + + +GR Y PD +V C K
Sbjct: 194 Q-SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR----GYLSPDLSKVRSNCPKAMK 248
Query: 235 HLLSRIFVANSEKRITIPEI 254
L++ ++R P+I
Sbjct: 249 RLMAECLKKKRDERPLFPQI 268
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 117/259 (45%), Gaps = 25/259 (9%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQ---REIMNHRSLKHPNIVRFKEV 66
IGSG+FG + + KW ++ AVK + + +Q E+ R +H NI+ F
Sbjct: 43 IGSGSFGT--VYKGKWHGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 99
Query: 67 LLTPTHLAIVMEYAAGGELFERI-CNAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLK 125
P LAIV ++ G L+ + +F + +Q G+ Y H+ I HRDLK
Sbjct: 100 STKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLK 158
Query: 126 LENTLLDGSTAPRVKICDFGY----SKSSVLHSQPKSTVGTPAYIAPEVLTKKEYD--GK 179
N L VKI DFG S+ S H Q + G+ ++APEV+ ++ +
Sbjct: 159 SNNIFLHEDLT--VKIGDFGLATVKSRWSGSH-QFEQLSGSILWMAPEVIRMQDKNPYSF 215
Query: 180 IADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLEC----KH 235
+DV++ G+ LY ++ G P+ + + +GR Y PD +V C K
Sbjct: 216 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR----GYLSPDLSKVRSNCPKAMKR 271
Query: 236 LLSRIFVANSEKRITIPEI 254
L++ ++R P+I
Sbjct: 272 LMAECLKKKRDERPLFPQI 290
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 117/259 (45%), Gaps = 25/259 (9%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQ---REIMNHRSLKHPNIVRFKEV 66
IGSG+FG + + KW ++ AVK + + +Q E+ R +H NI+ F
Sbjct: 44 IGSGSFGT--VYKGKWHGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 67 LLTPTHLAIVMEYAAGGELFERI-CNAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLK 125
P LAIV ++ G L+ + +F + +Q G+ Y H+ I HRDLK
Sbjct: 101 STKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLK 159
Query: 126 LENTLLDGSTAPRVKICDFGY----SKSSVLHSQPKSTVGTPAYIAPEVLTKKEYD--GK 179
N L VKI DFG S+ S H Q + G+ ++APEV+ ++ +
Sbjct: 160 SNNIFLHEDLT--VKIGDFGLATVKSRWSGSH-QFEQLSGSILWMAPEVIRMQDKNPYSF 216
Query: 180 IADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLEC----KH 235
+DV++ G+ LY ++ G P+ + + +GR Y PD +V C K
Sbjct: 217 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR----GYLSPDLSKVRSNCPKAMKR 272
Query: 236 LLSRIFVANSEKRITIPEI 254
L++ ++R P+I
Sbjct: 273 LMAECLKKKRDERPLFPQI 291
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 19/228 (8%)
Query: 6 IVKDIGSGNFGVAKLVRDKW-TRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRFK 64
V++IGSG FG+ L W ++ +A+K I+ G ++ E L HP +V+
Sbjct: 31 FVQEIGSGQFGLVHL--GYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLY 88
Query: 65 EVLLTPTHLAIVMEYAAGGELFERI-CNAGRFSEDEARFFFQQLISGVSYCHSMQICHRD 123
V L + +V E+ G L + + G F+ + + G++Y + HRD
Sbjct: 89 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRD 148
Query: 124 LKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTP---AYIAPEVLTKKEYDGKI 180
L N L+ + +K+ DFG ++ VL Q S+ GT + +PEV + Y K
Sbjct: 149 LAARNCLVGENQV--IKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK- 204
Query: 181 ADVWSCGVTLY-VMLVGAYPFEDPEDPK-------NFRKTIGRILSVH 220
+DVWS GV ++ V G P+E+ + + FR R+ S H
Sbjct: 205 SDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTH 252
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 114/274 (41%), Gaps = 30/274 (10%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKID-EHVQREIMNHRSLKHPNI 60
+ Y ++ +G G F LV A+K I ++ D E QRE HR HPNI
Sbjct: 29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNI 88
Query: 61 VRFKEVLLT---PTHLA-IVMEYAAGGELF---ERICNAGRF-SEDEARFFFQQLISGVS 112
+R L H A +++ + G L+ ER+ + G F +ED+ + + G+
Sbjct: 89 LRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLE 148
Query: 113 YCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTV----------GT 162
H+ HRDLK N LL P + D G + +H + T
Sbjct: 149 AIHAKGYAHRDLKPTNILLGDEGQP--VLMDLGSMNQACIHVEGSRQALTLQDWAAQRCT 206
Query: 163 PAYIAPEVLTKKEY--DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSV- 219
+Y APE+ + + + + DVWS G LY M+ G P++ F+K L+V
Sbjct: 207 ISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYD-----MVFQKGDSVALAVQ 261
Query: 220 -HYSFPDYVRVSLECKHLLSRIFVANSEKRITIP 252
S P R S LL+ + + +R IP
Sbjct: 262 NQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIP 295
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 109/223 (48%), Gaps = 24/223 (10%)
Query: 7 VKDIGSGNFGVAKLV----RDKWTRELLAVKFIER--GQKIDEHVQREIMNHRSLKHPNI 60
++D+G G+FG L + T E++AVK ++ G + ++EI R+L H +I
Sbjct: 19 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 61 VRFKEVL--LTPTHLAIVMEYAAGGELFERICNAGRFSEDEARF--FFQQLISGVSYCHS 116
+++K L +VMEY G L + + R S A+ F QQ+ G++Y H+
Sbjct: 79 IKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL---PRHSIGLAQLLLFAQQICEGMAYLHA 135
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKS---SVLHSQPKSTVGTPAY-IAPEVLT 172
HR+L N LLD VKI DFG +K+ + + + +P + APE L
Sbjct: 136 QHYIHRNLAARNVLLDNDRL--VKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL- 192
Query: 173 KKEYDGKIA-DVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIG 214
KEY A DVWS GVTLY +L + P P F + IG
Sbjct: 193 -KEYKFYYASDVWSFGVTLYELLTHCDSSQSP--PTKFLELIG 232
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 125/279 (44%), Gaps = 25/279 (8%)
Query: 1 MERYEIVKD-------IGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHR 53
+ER + K+ +G G FG + + T ++ A K +E+ + + +N +
Sbjct: 176 LERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEK 235
Query: 54 SLKHPNIVRFKEVLL----TPTHLAIVMEYAAGGELFERICNAGR--FSEDEARFFFQQL 107
+ RF L T L +V+ GG+L I + G+ F E A F+ ++
Sbjct: 236 QILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEI 295
Query: 108 ISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIA 167
G+ H +I +RDLK EN LLD ++I D G + K VGT Y+A
Sbjct: 296 CCGLEDLHRERIVYRDLKPENILLDDHG--HIRISDLGLAVHVPEGQTIKGRVGTVGYMA 353
Query: 168 PEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILS-VHYSFPDY 226
PEV+ + Y D W+ G LY M+ G PF+ K R+ + R++ V + +
Sbjct: 354 PEVVKNERYTFS-PDWWALGCLLYEMIAGQSPFQQ-RKKKIKREEVERLVKEVPEEYSE- 410
Query: 227 VRVSLECKHLLSRIFVANSEKRI-----TIPEIKNHPWF 260
R S + + L S++ + +R+ + E+K HP F
Sbjct: 411 -RFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLF 448
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 125/279 (44%), Gaps = 25/279 (8%)
Query: 1 MERYEIVKD-------IGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHR 53
+ER + K+ +G G FG + + T ++ A K +E+ + + +N +
Sbjct: 176 LERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEK 235
Query: 54 SLKHPNIVRFKEVLL----TPTHLAIVMEYAAGGELFERICNAGR--FSEDEARFFFQQL 107
+ RF L T L +V+ GG+L I + G+ F E A F+ ++
Sbjct: 236 QILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEI 295
Query: 108 ISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIA 167
G+ H +I +RDLK EN LLD ++I D G + K VGT Y+A
Sbjct: 296 CCGLEDLHRERIVYRDLKPENILLDDHG--HIRISDLGLAVHVPEGQTIKGRVGTVGYMA 353
Query: 168 PEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILS-VHYSFPDY 226
PEV+ + Y D W+ G LY M+ G PF+ K R+ + R++ V + +
Sbjct: 354 PEVVKNERYTFS-PDWWALGCLLYEMIAGQSPFQQ-RKKKIKREEVERLVKEVPEEYSE- 410
Query: 227 VRVSLECKHLLSRIFVANSEKRI-----TIPEIKNHPWF 260
R S + + L S++ + +R+ + E+K HP F
Sbjct: 411 -RFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLF 448
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 123/302 (40%), Gaps = 45/302 (14%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKH 57
++RY+ +K IGSG G+ D +A+K + R + H +R E++ + + H
Sbjct: 17 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFE-RICNAGRFSEDEAR--FFFQQLISGVSYC 114
NI+ V L + EL + +C + D R + Q++ G+ +
Sbjct: 77 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHL 136
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKK 174
HS I HRDLK N ++ +KI DFG ++++ V T Y APEV+
Sbjct: 137 HSAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 194
Query: 175 EYDGKIADVWSCGVTLYVMLVGA--YPFED----------------PEDPKNFRKTI--- 213
Y + D+WS G + M+ +P D PE K + T+
Sbjct: 195 GYKENV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 253
Query: 214 --GRILSVHYSFPDYVRVSL-------------ECKHLLSRIFVANSEKRITIPEIKNHP 258
R +FP SL + + LLS++ V + KRI++ + HP
Sbjct: 254 VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 313
Query: 259 WF 260
+
Sbjct: 314 YI 315
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 123/302 (40%), Gaps = 45/302 (14%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKH 57
++RY+ +K IGSG G+ D +A+K + R + H +R E++ + + H
Sbjct: 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 75
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFE-RICNAGRFSEDEAR--FFFQQLISGVSYC 114
NI+ V L + EL + +C + D R + Q++ G+ +
Sbjct: 76 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHL 135
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKK 174
HS I HRDLK N ++ +KI DFG ++++ V T Y APEV+
Sbjct: 136 HSAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 193
Query: 175 EYDGKIADVWSCGVTLYVMLVGA--YPFED----------------PEDPKNFRKTI--- 213
Y + D+WS G + M+ +P D PE K + T+
Sbjct: 194 GYKENV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 252
Query: 214 --GRILSVHYSFPDYVRVSL-------------ECKHLLSRIFVANSEKRITIPEIKNHP 258
R +FP SL + + LLS++ V + KRI++ + HP
Sbjct: 253 VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 312
Query: 259 WF 260
+
Sbjct: 313 YI 314
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 103/217 (47%), Gaps = 27/217 (12%)
Query: 5 EIVKDIGSGNFGV---AKLVRDKWTRELLAVKFIERGQKIDE--------HVQREIMNHR 53
E K IG G FG+ +LV+DK ++A+K + G E QRE+
Sbjct: 22 EYEKQIGKGGFGLVHKGRLVKDK---SVVAIKSLILGDSEGETEMIEKFQEFQREVFIMS 78
Query: 54 SLKHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLIS-GVS 112
+L HPNIV+ ++ P + VME+ G+L+ R+ + + + I+ G+
Sbjct: 79 NLNHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIE 136
Query: 113 YCHSMQ--ICHRDLKLENTL---LDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIA 167
Y + I HRDL+ N LD + K+ DF S+ SV HS +G ++A
Sbjct: 137 YMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSV-HSV-SGLLGNFQWMA 194
Query: 168 PEVLTKKE--YDGKIADVWSCGVTLYVMLVGAYPFED 202
PE + +E Y K AD +S + LY +L G PF++
Sbjct: 195 PETIGAEEESYTEK-ADTYSFAMILYTILTGEGPFDE 230
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 123/302 (40%), Gaps = 45/302 (14%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKH 57
++RY+ +K IGSG G+ D +A+K + R + H +R E++ + + H
Sbjct: 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 120
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFE-RICNAGRFSEDEAR--FFFQQLISGVSYC 114
NI+ V L + EL + +C + D R + Q++ G+ +
Sbjct: 121 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHL 180
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKK 174
HS I HRDLK N ++ +KI DFG ++++ V T Y APEV+
Sbjct: 181 HSAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 238
Query: 175 EYDGKIADVWSCGVTLYVMLVGA--YPFED----------------PEDPKNFRKTI--- 213
Y + D+WS G + M+ +P D PE K + T+
Sbjct: 239 GYKENV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 297
Query: 214 --GRILSVHYSFPDYVRVSL-------------ECKHLLSRIFVANSEKRITIPEIKNHP 258
R +FP SL + + LLS++ V + KRI++ + HP
Sbjct: 298 VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 357
Query: 259 WF 260
+
Sbjct: 358 YI 359
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 123/302 (40%), Gaps = 45/302 (14%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKH 57
++RY+ +K IGSG G+ D +A+K + R + H +R E++ + + H
Sbjct: 22 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 81
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFE-RICNAGRFSEDEAR--FFFQQLISGVSYC 114
NI+ V L + EL + +C + D R + Q++ G+ +
Sbjct: 82 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHL 141
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKK 174
HS I HRDLK N ++ +KI DFG ++++ V T Y APEV+
Sbjct: 142 HSAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 199
Query: 175 EYDGKIADVWSCGVTLYVMLVGA--YPFED----------------PEDPKNFRKTI--- 213
Y + D+WS G + M+ +P D PE K + T+
Sbjct: 200 GYKENV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 258
Query: 214 --GRILSVHYSFPDYVRVSL-------------ECKHLLSRIFVANSEKRITIPEIKNHP 258
R +FP SL + + LLS++ V + KRI++ + HP
Sbjct: 259 VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 318
Query: 259 WF 260
+
Sbjct: 319 YI 320
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 123/302 (40%), Gaps = 45/302 (14%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKH 57
++RY+ +K IGSG G+ D +A+K + R + H +R E++ + + H
Sbjct: 24 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFE-RICNAGRFSEDEAR--FFFQQLISGVSYC 114
NI+ V L + EL + +C + D R + Q++ G+ +
Sbjct: 84 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHL 143
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKK 174
HS I HRDLK N ++ +KI DFG ++++ V T Y APEV+
Sbjct: 144 HSAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 201
Query: 175 EYDGKIADVWSCGVTLYVMLVGA--YPFED----------------PEDPKNFRKTI--- 213
Y + D+WS G + M+ +P D PE K + T+
Sbjct: 202 GYKENV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 260
Query: 214 --GRILSVHYSFPDYVRVSL-------------ECKHLLSRIFVANSEKRITIPEIKNHP 258
R +FP SL + + LLS++ V + KRI++ + HP
Sbjct: 261 VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 320
Query: 259 WF 260
+
Sbjct: 321 YI 322
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 123/302 (40%), Gaps = 45/302 (14%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKH 57
++RY+ +K IGSG G+ D +A+K + R + H +R E++ + + H
Sbjct: 17 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFE-RICNAGRFSEDEAR--FFFQQLISGVSYC 114
NI+ V L + EL + +C + D R + Q++ G+ +
Sbjct: 77 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHL 136
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKK 174
HS I HRDLK N ++ +KI DFG ++++ V T Y APEV+
Sbjct: 137 HSAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 194
Query: 175 EYDGKIADVWSCGVTLYVMLVGA--YPFED----------------PEDPKNFRKTI--- 213
Y + D+WS G + M+ +P D PE K + T+
Sbjct: 195 GYKENV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 253
Query: 214 --GRILSVHYSFPDYVRVSL-------------ECKHLLSRIFVANSEKRITIPEIKNHP 258
R +FP SL + + LLS++ V + KRI++ + HP
Sbjct: 254 VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 313
Query: 259 WF 260
+
Sbjct: 314 YI 315
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 123/302 (40%), Gaps = 45/302 (14%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKH 57
++RY+ +K IGSG G+ D +A+K + R + H +R E++ + + H
Sbjct: 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 120
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFE-RICNAGRFSEDEAR--FFFQQLISGVSYC 114
NI+ V L + EL + +C + D R + Q++ G+ +
Sbjct: 121 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHL 180
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKK 174
HS I HRDLK N ++ +KI DFG ++++ V T Y APEV+
Sbjct: 181 HSAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 238
Query: 175 EYDGKIADVWSCGVTLYVMLVGA--YPFED----------------PEDPKNFRKTI--- 213
Y + D+WS G + M+ +P D PE K + T+
Sbjct: 239 GYKENV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 297
Query: 214 --GRILSVHYSFPDYVRVSL-------------ECKHLLSRIFVANSEKRITIPEIKNHP 258
R +FP SL + + LLS++ V + KRI++ + HP
Sbjct: 298 VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 357
Query: 259 WF 260
+
Sbjct: 358 YI 359
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 123/302 (40%), Gaps = 45/302 (14%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKH 57
++RY+ +K IGSG G+ D +A+K + R + H +R E++ + + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFE-RICNAGRFSEDEAR--FFFQQLISGVSYC 114
NI+ V L + EL + +C + D R + Q++ G+ +
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHL 142
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKK 174
HS I HRDLK N ++ +KI DFG ++++ V T Y APEV+
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 175 EYDGKIADVWSCGVTLYVMLVGA--YPFED----------------PEDPKNFRKTI--- 213
Y + D+WS G + M+ +P D PE K + T+
Sbjct: 201 GYKENV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 259
Query: 214 --GRILSVHYSFPDYVRVSL-------------ECKHLLSRIFVANSEKRITIPEIKNHP 258
R +FP SL + + LLS++ V + KRI++ + HP
Sbjct: 260 VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 319
Query: 259 WF 260
+
Sbjct: 320 YI 321
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 123/302 (40%), Gaps = 45/302 (14%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKH 57
++RY+ +K IGSG G+ D +A+K + R + H +R E++ + + H
Sbjct: 24 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFE-RICNAGRFSEDEAR--FFFQQLISGVSYC 114
NI+ V L + EL + +C + D R + Q++ G+ +
Sbjct: 84 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHL 143
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKK 174
HS I HRDLK N ++ +KI DFG ++++ V T Y APEV+
Sbjct: 144 HSAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 201
Query: 175 EYDGKIADVWSCGVTLYVMLVGA--YPFED----------------PEDPKNFRKTI--- 213
Y + D+WS G + M+ +P D PE K + T+
Sbjct: 202 GYKENV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 260
Query: 214 --GRILSVHYSFPDYVRVSL-------------ECKHLLSRIFVANSEKRITIPEIKNHP 258
R +FP SL + + LLS++ V + KRI++ + HP
Sbjct: 261 VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 320
Query: 259 WF 260
+
Sbjct: 321 YI 322
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 123/302 (40%), Gaps = 45/302 (14%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKH 57
++RY+ +K IGSG G+ D +A+K + R + H +R E++ + + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNH 82
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFE-RICNAGRFSEDEAR--FFFQQLISGVSYC 114
NI+ V L + EL + +C + D R + Q++ G+ +
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHL 142
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKK 174
HS I HRDLK N ++ +KI DFG ++++ V T Y APEV+
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDXT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 175 EYDGKIADVWSCGVTLYVMLVGA--YPFED----------------PEDPKNFRKTI--- 213
Y + D+WS G + M+ +P D PE K + T+
Sbjct: 201 GYKENV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 259
Query: 214 --GRILSVHYSFPDYVRVSL-------------ECKHLLSRIFVANSEKRITIPEIKNHP 258
R +FP SL + + LLS++ V + KRI++ + HP
Sbjct: 260 VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 319
Query: 259 WF 260
+
Sbjct: 320 YI 321
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 123/302 (40%), Gaps = 45/302 (14%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKH 57
++RY+ +K IGSG G+ D +A+K + R + H +R E++ + + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFE-RICNAGRFSEDEAR--FFFQQLISGVSYC 114
NI+ V L + EL + +C + D R + Q++ G+ +
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHL 142
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKK 174
HS I HRDLK N ++ +KI DFG ++++ V T Y APEV+
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 175 EYDGKIADVWSCGVTLYVMLVGA--YPFED----------------PEDPKNFRKTI--- 213
Y + D+WS G + M+ +P D PE K + T+
Sbjct: 201 GYKENV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 259
Query: 214 --GRILSVHYSFPDYVRVSL-------------ECKHLLSRIFVANSEKRITIPEIKNHP 258
R +FP SL + + LLS++ V + KRI++ + HP
Sbjct: 260 VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 319
Query: 259 WF 260
+
Sbjct: 320 YI 321
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 108/221 (48%), Gaps = 18/221 (8%)
Query: 7 VKDIGSGNFGVAKLVR----DKWTRELLAVKFI--ERGQKIDEHVQREIMNHRSLKHPNI 60
++D+G G+FG +L R T E +AVK + E G +++EI R+L H NI
Sbjct: 14 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENI 73
Query: 61 VRFKEVLLTP--THLAIVMEYAAGGELFERI-CNAGRFSEDEARFFFQQLISGVSYCHSM 117
V++K + + ++ME+ G L E + N + + + + Q+ G+ Y S
Sbjct: 74 VKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR 133
Query: 118 QICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQP---KSTVGTPAY-IAPEVLTK 173
Q HRDL N L++ + +VKI DFG +K+ + K +P + APE L +
Sbjct: 134 QYVHRDLAARNVLVE--SEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQ 191
Query: 174 KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIG 214
++ +DVWS GVTL+ +L Y D F K IG
Sbjct: 192 SKF-YIASDVWSFGVTLHELL--TYCDSDSSPMALFLKMIG 229
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 108/221 (48%), Gaps = 18/221 (8%)
Query: 7 VKDIGSGNFGVAKLVR----DKWTRELLAVKFI--ERGQKIDEHVQREIMNHRSLKHPNI 60
++D+G G+FG +L R T E +AVK + E G +++EI R+L H NI
Sbjct: 26 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENI 85
Query: 61 VRFKEVLLTP--THLAIVMEYAAGGELFERI-CNAGRFSEDEARFFFQQLISGVSYCHSM 117
V++K + + ++ME+ G L E + N + + + + Q+ G+ Y S
Sbjct: 86 VKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR 145
Query: 118 QICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQP---KSTVGTPAY-IAPEVLTK 173
Q HRDL N L++ + +VKI DFG +K+ + K +P + APE L +
Sbjct: 146 QYVHRDLAARNVLVE--SEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQ 203
Query: 174 KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIG 214
++ +DVWS GVTL+ +L Y D F K IG
Sbjct: 204 SKF-YIASDVWSFGVTLHELL--TYCDSDSSPMALFLKMIG 241
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 96/208 (46%), Gaps = 24/208 (11%)
Query: 6 IVKDIGSGNFGVAKLVRDKWTREL-LAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRFK 64
+K++G+G FGV K KW + +A+K I+ G ++ E +L H +V+
Sbjct: 13 FLKELGTGQFGVVKY--GKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLY 70
Query: 65 EVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLI-------SGVSYCHSM 117
V + I+ EY A G C E RF QQL+ + Y S
Sbjct: 71 GVCTKQRPIFIITEYMANG------CLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK 124
Query: 118 QICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTP---AYIAPEVLTKK 174
Q HRDL N L++ VK+ DFG S+ VL + S+ G+ + PEVL
Sbjct: 125 QFLHRDLAARNCLVNDQGV--VKVSDFGLSR-YVLDDEYTSSRGSKFPVRWSPPEVLMYS 181
Query: 175 EYDGKIADVWSCGVTLY-VMLVGAYPFE 201
++ K +D+W+ GV ++ + +G P+E
Sbjct: 182 KFSSK-SDIWAFGVLMWEIYSLGKMPYE 208
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 30/210 (14%)
Query: 4 YEIVKDIGSGNFGV---AKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNI 60
Y K IG+G+FGV AKLV + +A+K + + ++ RE+ R +KHPN+
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVES----DEVAIKKVLQDKRFK---NRELQIMRIVKHPNV 94
Query: 61 VRFKEVLLT------PTHLAIVMEYAAGGELFERICNAGRFSEDEA--------RFFFQQ 106
V K + L +V+EY E + A R + + Q
Sbjct: 95 VDLKAFFYSNGDKKDEVFLNLVLEYVP-----ETVYRASRHYAKLKQTMPMLLIKLYMYQ 149
Query: 107 LISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYI 166
L+ ++Y HS+ ICHRD+K +N LLD + +K+ DFG +K + S + + Y
Sbjct: 150 LLRSLAYIHSIGICHRDIKPQNLLLDPPSG-VLKLIDFGSAKILIAGEPNVSXICSRYYR 208
Query: 167 APEVLTKKEYDGKIADVWSCGVTLYVMLVG 196
APE++ D+WS G + ++ G
Sbjct: 209 APELIFGATNYTTNIDIWSTGCVMAELMQG 238
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 105/223 (47%), Gaps = 24/223 (10%)
Query: 7 VKDIGSGNFGVAKLV----RDKWTRELLAVKFIERG--QKIDEHVQREIMNHRSLKHPNI 60
++D+G G+FG L + T E++AVK ++ G ++ QREI R+L H +I
Sbjct: 14 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHI 73
Query: 61 VRFKEVL--LTPTHLAIVMEYAAGGEL---FERICNAGRFSEDEARFFFQQLISGVSYCH 115
V++K + +VMEY G L R C + F QQ+ G++Y H
Sbjct: 74 VKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC----VGLAQLLLFAQQICEGMAYLH 129
Query: 116 SMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS---SVLHSQPKSTVGTPAY-IAPEVL 171
+ HR L N LLD VKI DFG +K+ + + + +P + APE L
Sbjct: 130 AQHYIHRALAARNVLLDNDRL--VKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL 187
Query: 172 TKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIG 214
+ ++ +DVWS GVTLY +L + P F + IG
Sbjct: 188 KECKF-YYASDVWSFGVTLYELLTYCDSNQSPH--TKFTELIG 227
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 105/223 (47%), Gaps = 24/223 (10%)
Query: 7 VKDIGSGNFGVAKLV----RDKWTRELLAVKFIERG--QKIDEHVQREIMNHRSLKHPNI 60
++D+G G+FG L + T E++AVK ++ G ++ QREI R+L H +I
Sbjct: 13 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHI 72
Query: 61 VRFKEVL--LTPTHLAIVMEYAAGGEL---FERICNAGRFSEDEARFFFQQLISGVSYCH 115
V++K + +VMEY G L R C + F QQ+ G++Y H
Sbjct: 73 VKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC----VGLAQLLLFAQQICEGMAYLH 128
Query: 116 SMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS---SVLHSQPKSTVGTPAY-IAPEVL 171
+ HR L N LLD VKI DFG +K+ + + + +P + APE L
Sbjct: 129 AQHYIHRALAARNVLLDNDRL--VKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL 186
Query: 172 TKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIG 214
+ ++ +DVWS GVTLY +L + P F + IG
Sbjct: 187 KECKF-YYASDVWSFGVTLYELLTYCDSNQSPH--TKFTELIG 226
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 96/242 (39%), Gaps = 28/242 (11%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQ---REIMNHRSLK- 56
+ +YE+VK +G G +G+ D+ T E++AVK I + Q REIM L
Sbjct: 8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSG 67
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
H NIV VL + + + + A ++ QLI + Y HS
Sbjct: 68 HENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHS 127
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVL--------------------HSQP 156
+ HRD+K N LL+ VK+ DFG S+S V QP
Sbjct: 128 GGLLHRDMKPSNILLNAEC--HVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQP 185
Query: 157 KST--VGTPAYIAPEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIG 214
T V T Y APE+L K D+WS G L +L G F + IG
Sbjct: 186 ILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIG 245
Query: 215 RI 216
I
Sbjct: 246 VI 247
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 90/202 (44%), Gaps = 13/202 (6%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE--RGQKIDEHVQREIMNHRSLKHPNI 60
RY + IG G +G+ D + +A+K I Q + REI +H NI
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGELFE----RICNAGRFSEDEARFFFQQLISGVSYCHS 116
+ +++ PT + + + +L E ++ S D +F Q++ G+ Y HS
Sbjct: 84 IGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 142
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSK-SSVLHSQP---KSTVGTPAYIAPEVLT 172
+ HRDLK N LL+ T +KI DFG ++ + H V T Y APE++
Sbjct: 143 ANVLHRDLKPSNLLLN--TTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 173 KKEYDGKIADVWSCGVTLYVML 194
+ K D+WS G L ML
Sbjct: 201 NSKGYTKSIDIWSVGCILAEML 222
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 98/223 (43%), Gaps = 14/223 (6%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQ-----REIMN-HRS 54
M+RYEI IG G+FG D+ +E +A+K I+ + Q E+MN H +
Sbjct: 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDT 112
Query: 55 LKHPNIVRFKEVLLTPTHLAIVMEYAAGGELFE--RICNAGRFSEDEARFFFQQLISGVS 112
IV K + HL +V E + L++ R N S + R F QQ+ + +
Sbjct: 113 EMKYYIVHLKRHFMFRNHLCLVFEMLSYN-LYDLLRNTNFRGVSLNLTRKFAQQMCTALL 171
Query: 113 YCHS--MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEV 170
+ + + I H DLK EN LL +KI DFG S L + + + Y +PEV
Sbjct: 172 FLATPELSIIHCDLKPENILLCNPKRSAIKIVDFG--SSCQLGQRIYQXIQSRFYRSPEV 229
Query: 171 LTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTI 213
L YD I D+WS G L M G F + K +
Sbjct: 230 LLGMPYDLAI-DMWSLGCILVEMHTGEPLFSGANEVDQMNKIV 271
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 98/223 (43%), Gaps = 14/223 (6%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQ-----REIMN-HRS 54
M+RYEI IG G+FG D+ +E +A+K I+ + Q E+MN H +
Sbjct: 34 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDT 93
Query: 55 LKHPNIVRFKEVLLTPTHLAIVMEYAAGGELFE--RICNAGRFSEDEARFFFQQLISGVS 112
IV K + HL +V E + L++ R N S + R F QQ+ + +
Sbjct: 94 EMKYYIVHLKRHFMFRNHLCLVFEMLSYN-LYDLLRNTNFRGVSLNLTRKFAQQMCTALL 152
Query: 113 YCHS--MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEV 170
+ + + I H DLK EN LL +KI DFG S L + + + Y +PEV
Sbjct: 153 FLATPELSIIHCDLKPENILLCNPKRSAIKIVDFG--SSCQLGQRIYQXIQSRFYRSPEV 210
Query: 171 LTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTI 213
L YD I D+WS G L M G F + K +
Sbjct: 211 LLGMPYDLAI-DMWSLGCILVEMHTGEPLFSGANEVDQMNKIV 252
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 121/282 (42%), Gaps = 41/282 (14%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWT-RELLAVKFIERGQKIDEHVQREIMNHRSLK-HPNI 60
R + + + G F +D + RE + + ++ + + +E+ + L HPNI
Sbjct: 29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNI 88
Query: 61 VRF--------KEVLLTPTHLAIVMEYAAGG--ELFERICNAGRFSEDEARFFFQQLISG 110
V+F +E ++ E G E +++ + G S D F Q
Sbjct: 89 VQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRA 148
Query: 111 VSYCHSMQ--ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLH-------SQPKSTV- 160
V + H + I HRDLK+EN LL S +K+CDFG S +++ H +Q ++ V
Sbjct: 149 VQHMHRQKPPIIHRDLKVENLLL--SNQGTIKLCDFG-SATTISHYPDYSWSAQRRALVE 205
Query: 161 ------GTPAYIAPEV--LTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKT 212
TP Y PE+ L G+ D+W+ G LY++ +PFED
Sbjct: 206 EEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL------ 259
Query: 213 IGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEI 254
RI++ YS P + L+ + N E+R++I E+
Sbjct: 260 --RIVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEV 299
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 98/223 (43%), Gaps = 14/223 (6%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREI-----MN-HRS 54
M+RYEI IG G+FG D+ +E +A+K I+ + Q E+ MN H +
Sbjct: 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDT 112
Query: 55 LKHPNIVRFKEVLLTPTHLAIVMEYAAGGELFE--RICNAGRFSEDEARFFFQQLISGVS 112
IV K + HL +V E + L++ R N S + R F QQ+ + +
Sbjct: 113 EMKYYIVHLKRHFMFRNHLCLVFEMLSYN-LYDLLRNTNFRGVSLNLTRKFAQQMCTALL 171
Query: 113 YCHS--MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEV 170
+ + + I H DLK EN LL +KI DFG S L + + + Y +PEV
Sbjct: 172 FLATPELSIIHCDLKPENILLCNPKRXAIKIVDFG--SSCQLGQRIYQXIQSRFYRSPEV 229
Query: 171 LTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTI 213
L YD I D+WS G L M G F + K +
Sbjct: 230 LLGMPYDLAI-DMWSLGCILVEMHTGEPLFSGANEVDQMNKIV 271
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 98/214 (45%), Gaps = 16/214 (7%)
Query: 4 YEIVKDIGSG--NFGVAKLVRDKWTRELLAVKFIERGQKIDEHV---QREIMNHRSLKHP 58
YE++ IG G + L R K T E + V+ I +E V Q E+ + HP
Sbjct: 11 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHP 70
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGELFERICN--AGRFSEDEARFFFQQLISGVSYCHS 116
NIV ++ + L +V + A G + IC +E + Q ++ + Y H
Sbjct: 71 NIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHH 130
Query: 117 MQICHRDLKLENTLL--DGS---TAPRVKICDFGY-SKSSVLHSQPKSTVGTPAYIAPEV 170
M HR +K + L+ DG + R + + + V+H PK +V +++PEV
Sbjct: 131 MGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEV 190
Query: 171 LTK--KEYDGKIADVWSCGVTLYVMLVGAYPFED 202
L + + YD K +D++S G+T + G PF+D
Sbjct: 191 LQQNLQGYDAK-SDIYSVGITACELANGHVPFKD 223
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 98/214 (45%), Gaps = 16/214 (7%)
Query: 4 YEIVKDIGSG--NFGVAKLVRDKWTRELLAVKFIERGQKIDEHV---QREIMNHRSLKHP 58
YE++ IG G + L R K T E + V+ I +E V Q E+ + HP
Sbjct: 27 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHP 86
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGELFERICN--AGRFSEDEARFFFQQLISGVSYCHS 116
NIV ++ + L +V + A G + IC +E + Q ++ + Y H
Sbjct: 87 NIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHH 146
Query: 117 MQICHRDLKLENTLL--DGS---TAPRVKICDFGY-SKSSVLHSQPKSTVGTPAYIAPEV 170
M HR +K + L+ DG + R + + + V+H PK +V +++PEV
Sbjct: 147 MGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEV 206
Query: 171 LTK--KEYDGKIADVWSCGVTLYVMLVGAYPFED 202
L + + YD K +D++S G+T + G PF+D
Sbjct: 207 LQQNLQGYDAK-SDIYSVGITACELANGHVPFKD 239
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 102/214 (47%), Gaps = 24/214 (11%)
Query: 5 EIVKDIGSGNFG--VAKLVRDKWTREL-LAVKFIERG----QKIDEHVQREIMNHRSLKH 57
+I K IG G FG + ++ RE+ +A+K ++ G Q+ D + IM H
Sbjct: 32 KIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQ--FDH 89
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGEL--FERICNAGRFSEDEARFFFQQLISGVSYCH 115
PNI+ + V+ + I+ EY G L F R N GRF+ + + + SG+ Y
Sbjct: 90 PNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRK-NDGRFTVIQLVGMLRGIGSGMKYLS 148
Query: 116 SMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA------YIAPE 169
M HRDL N L++ + K+ DFG S+ VL P++ T + APE
Sbjct: 149 DMSAVHRDLAARNILVNSNLV--CKVSDFGMSR--VLEDDPEAAYTTRGGKIPIRWTAPE 204
Query: 170 VLTKKEYDGKIADVWSCGVTLY-VMLVGAYPFED 202
+ +++ +DVWS G+ ++ VM G P+ D
Sbjct: 205 AIAYRKFTSA-SDVWSYGIVMWEVMSYGERPYWD 237
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 102/214 (47%), Gaps = 24/214 (11%)
Query: 5 EIVKDIGSGNFG--VAKLVRDKWTREL-LAVKFIERG----QKIDEHVQREIMNHRSLKH 57
+I K IG G FG + ++ RE+ +A+K ++ G Q+ D + IM H
Sbjct: 17 KIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQ--FDH 74
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGEL--FERICNAGRFSEDEARFFFQQLISGVSYCH 115
PNI+ + V+ + I+ EY G L F R N GRF+ + + + SG+ Y
Sbjct: 75 PNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRK-NDGRFTVIQLVGMLRGIGSGMKYLS 133
Query: 116 SMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA------YIAPE 169
M HRDL N L++ + K+ DFG S+ VL P++ T + APE
Sbjct: 134 DMSYVHRDLAARNILVNSNLV--CKVSDFGMSR--VLEDDPEAAYTTRGGKIPIRWTAPE 189
Query: 170 VLTKKEYDGKIADVWSCGVTLY-VMLVGAYPFED 202
+ +++ +DVWS G+ ++ VM G P+ D
Sbjct: 190 AIAYRKFTSA-SDVWSYGIVMWEVMSYGERPYWD 222
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 102/214 (47%), Gaps = 24/214 (11%)
Query: 5 EIVKDIGSGNFG--VAKLVRDKWTREL-LAVKFIERG----QKIDEHVQREIMNHRSLKH 57
+I K IG G FG + ++ RE+ +A+K ++ G Q+ D + IM H
Sbjct: 11 KIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQ--FDH 68
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGEL--FERICNAGRFSEDEARFFFQQLISGVSYCH 115
PNI+ + V+ + I+ EY G L F R N GRF+ + + + SG+ Y
Sbjct: 69 PNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRK-NDGRFTVIQLVGMLRGIGSGMKYLS 127
Query: 116 SMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA------YIAPE 169
M HRDL N L++ + K+ DFG S+ VL P++ T + APE
Sbjct: 128 DMSYVHRDLAARNILVNSNLV--CKVSDFGMSR--VLEDDPEAAYTTRGGKIPIRWTAPE 183
Query: 170 VLTKKEYDGKIADVWSCGVTLY-VMLVGAYPFED 202
+ +++ +DVWS G+ ++ VM G P+ D
Sbjct: 184 AIAYRKFTSA-SDVWSYGIVMWEVMSYGERPYWD 216
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 29/214 (13%)
Query: 6 IVKDIGSGNFGVAKLVRDKWTR----------ELLAVKFIERGQKIDEHVQREIMNHRSL 55
+++ +G G+FGV + R +W + L + + + +D+ + RE+ SL
Sbjct: 12 LLEKLGDGSFGVVR--RGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFI-REVNAMHSL 68
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERI-CNAGRFSEDEARFFFQQLISGVSYC 114
H N++R V+LTP + +V E A G L +R+ + G F + Q+ G+ Y
Sbjct: 69 DHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL 127
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-------SVLHSQPKSTVGTPAYIA 167
S + HRDL N LL +T VKI DFG ++ V+ K A+ A
Sbjct: 128 ESKRFIHRDLAARNLLL--ATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPF---AWCA 182
Query: 168 PEVLTKKEYDGKIADVWSCGVTLYVMLV-GAYPF 200
PE L + + +D W GVTL+ M G P+
Sbjct: 183 PESLKTRTF-SHASDTWMFGVTLWEMFTYGQEPW 215
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 29/214 (13%)
Query: 6 IVKDIGSGNFGVAKLVRDKWTR----------ELLAVKFIERGQKIDEHVQREIMNHRSL 55
+++ +G G+FGV + R +W + L + + + +D+ + RE+ SL
Sbjct: 22 LLEKLGDGSFGVVR--RGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFI-REVNAMHSL 78
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERI-CNAGRFSEDEARFFFQQLISGVSYC 114
H N++R V+LTP + +V E A G L +R+ + G F + Q+ G+ Y
Sbjct: 79 DHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL 137
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-------SVLHSQPKSTVGTPAYIA 167
S + HRDL N LL +T VKI DFG ++ V+ K A+ A
Sbjct: 138 ESKRFIHRDLAARNLLL--ATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPF---AWCA 192
Query: 168 PEVLTKKEYDGKIADVWSCGVTLYVMLV-GAYPF 200
PE L + + +D W GVTL+ M G P+
Sbjct: 193 PESLKTRTF-SHASDTWMFGVTLWEMFTYGQEPW 225
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 103/217 (47%), Gaps = 32/217 (14%)
Query: 5 EIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNH----RSLKHPNI 60
E + ++GSG G +R + T ++AVK + R +E+ +R +M+ +S P I
Sbjct: 28 ENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEEN-KRILMDLDVVLKSHDCPYI 86
Query: 61 VRFKEVLLTPTHLAIVMEYAAG----------GELFERICNAGRFSEDEARFFFQQLISG 110
V+ +T T + I ME G + ERI + +A ++ ++
Sbjct: 87 VQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKE---- 142
Query: 111 VSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEV 170
+ HRD+K N LLD ++K+CDFG S V + G AY+APE
Sbjct: 143 -----KHGVIHRDVKPSNILLD--ERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPER 195
Query: 171 L-----TKKEYDGKIADVWSCGVTLYVMLVGAYPFED 202
+ TK +YD + ADVWS G++L + G +P+++
Sbjct: 196 IDPPDPTKPDYDIR-ADVWSLGISLVELATGQFPYKN 231
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 126/292 (43%), Gaps = 41/292 (14%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKH-PNIVR 62
Y++V+ +G G + + E + VK ++ +K ++REI +L+ PNI+
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKK--NKIKREIKILENLRGGPNIIT 96
Query: 63 FKEVLLTPTHL--AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQIC 120
+++ P A+V E+ + F+++ ++ + RF+ +++ + YCHSM I
Sbjct: 97 LADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKALDYCHSMGIM 153
Query: 121 HRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKI 180
HRD+K N ++D ++++ D+G ++ + V + + PE+L +
Sbjct: 154 HRDVKPHNVMIDHEHR-KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYS 212
Query: 181 ADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVH--YSFPDYVRVSL------- 231
D+WS G L M+ PF D + I ++L Y + D + L
Sbjct: 213 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI 272
Query: 232 ---------------ECKHLLS--------RIFVANSEKRITIPEIKNHPWF 260
E +HL+S ++ + + R+T E HP+F
Sbjct: 273 LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 122/302 (40%), Gaps = 45/302 (14%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKH 57
++RY+ +K IGSG G+ D +A+K + R + H +R E++ + + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNH 82
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFE-RICNAGRFSEDEAR--FFFQQLISGVSYC 114
NI+ V L + EL + + + D R + Q++ G+ +
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHL 142
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKK 174
HS I HRDLK N ++ +KI DFG ++++ V T Y APEV+
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDXT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 175 EYDGKIADVWSCGVTLYVMLVGA--YPFED----------------PEDPKNFRKTI--- 213
Y + D+WS G + M+ +P D PE K + T+
Sbjct: 201 GYKENV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 259
Query: 214 --GRILSVHYSFPDYVRVSL-------------ECKHLLSRIFVANSEKRITIPEIKNHP 258
R +FP SL + + LLS++ V + KRI++ + HP
Sbjct: 260 VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 319
Query: 259 WF 260
+
Sbjct: 320 YI 321
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 29/214 (13%)
Query: 6 IVKDIGSGNFGVAKLVRDKWTR----------ELLAVKFIERGQKIDEHVQREIMNHRSL 55
+++ +G G+FGV + R +W + L + + + +D+ + RE+ SL
Sbjct: 16 LLEKLGDGSFGVVR--RGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFI-REVNAMHSL 72
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERI-CNAGRFSEDEARFFFQQLISGVSYC 114
H N++R V+LTP + +V E A G L +R+ + G F + Q+ G+ Y
Sbjct: 73 DHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL 131
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-------SVLHSQPKSTVGTPAYIA 167
S + HRDL N LL +T VKI DFG ++ V+ K A+ A
Sbjct: 132 ESKRFIHRDLAARNLLL--ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPF---AWCA 186
Query: 168 PEVLTKKEYDGKIADVWSCGVTLYVMLV-GAYPF 200
PE L + + +D W GVTL+ M G P+
Sbjct: 187 PESLKTRTF-SHASDTWMFGVTLWEMFTYGQEPW 219
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 29/214 (13%)
Query: 6 IVKDIGSGNFGVAKLVRDKWTR----------ELLAVKFIERGQKIDEHVQREIMNHRSL 55
+++ +G G+FGV + R +W + L + + + +D+ + RE+ SL
Sbjct: 22 LLEKLGDGSFGVVR--RGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFI-REVNAMHSL 78
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERI-CNAGRFSEDEARFFFQQLISGVSYC 114
H N++R V+LTP + +V E A G L +R+ + G F + Q+ G+ Y
Sbjct: 79 DHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL 137
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-------SVLHSQPKSTVGTPAYIA 167
S + HRDL N LL +T VKI DFG ++ V+ K A+ A
Sbjct: 138 ESKRFIHRDLAARNLLL--ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPF---AWCA 192
Query: 168 PEVLTKKEYDGKIADVWSCGVTLYVMLV-GAYPF 200
PE L + + +D W GVTL+ M G P+
Sbjct: 193 PESLKTRTF-SHASDTWMFGVTLWEMFTYGQEPW 225
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 122/302 (40%), Gaps = 45/302 (14%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKH 57
++RY+ +K IGSG G+ D +A+K + R + H +R E++ + + H
Sbjct: 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 75
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFE-RICNAGRFSEDEAR--FFFQQLISGVSYC 114
NI+ V L + EL + + + D R + Q++ G+ +
Sbjct: 76 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHL 135
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKK 174
HS I HRDLK N ++ +KI DFG ++++ V T Y APEV+
Sbjct: 136 HSAGIIHRDLKPSNIVVKSDXT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 193
Query: 175 EYDGKIADVWSCGVTLYVMLVGA--YPFED----------------PEDPKNFRKTI--- 213
Y + D+WS G + M+ +P D PE K + T+
Sbjct: 194 GYKENV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 252
Query: 214 --GRILSVHYSFPDYVRVSL-------------ECKHLLSRIFVANSEKRITIPEIKNHP 258
R +FP SL + + LLS++ V + KRI++ + HP
Sbjct: 253 VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 312
Query: 259 WF 260
+
Sbjct: 313 YI 314
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 29/214 (13%)
Query: 6 IVKDIGSGNFGVAKLVRDKWTR----------ELLAVKFIERGQKIDEHVQREIMNHRSL 55
+++ +G G+FGV + R +W + L + + + +D+ + RE+ SL
Sbjct: 12 LLEKLGDGSFGVVR--RGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFI-REVNAMHSL 68
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERI-CNAGRFSEDEARFFFQQLISGVSYC 114
H N++R V+LTP + +V E A G L +R+ + G F + Q+ G+ Y
Sbjct: 69 DHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL 127
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-------SVLHSQPKSTVGTPAYIA 167
S + HRDL N LL +T VKI DFG ++ V+ K A+ A
Sbjct: 128 ESKRFIHRDLAARNLLL--ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPF---AWCA 182
Query: 168 PEVLTKKEYDGKIADVWSCGVTLYVMLV-GAYPF 200
PE L + + +D W GVTL+ M G P+
Sbjct: 183 PESLKTRTF-SHASDTWMFGVTLWEMFTYGQEPW 215
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 122/302 (40%), Gaps = 45/302 (14%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKH 57
++RY+ +K IGSG G+ D +A+K + R + H +R E++ + + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFE-RICNAGRFSEDEAR--FFFQQLISGVSYC 114
NI+ V L + EL + + + D R + Q++ G+ +
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHL 142
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKK 174
HS I HRDLK N ++ +KI DFG ++++ V T Y APEV+
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDXT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 175 EYDGKIADVWSCGVTLYVMLVGA--YPFED----------------PEDPKNFRKTI--- 213
Y + D+WS G + M+ +P D PE K + T+
Sbjct: 201 GYKENV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 259
Query: 214 --GRILSVHYSFPDYVRVSL-------------ECKHLLSRIFVANSEKRITIPEIKNHP 258
R +FP SL + + LLS++ V + KRI++ + HP
Sbjct: 260 VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 319
Query: 259 WF 260
+
Sbjct: 320 YI 321
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 29/214 (13%)
Query: 6 IVKDIGSGNFGVAKLVRDKWTR----------ELLAVKFIERGQKIDEHVQREIMNHRSL 55
+++ +G G+FGV + R +W + L + + + +D+ + RE+ SL
Sbjct: 12 LLEKLGDGSFGVVR--RGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFI-REVNAMHSL 68
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERI-CNAGRFSEDEARFFFQQLISGVSYC 114
H N++R V+LTP + +V E A G L +R+ + G F + Q+ G+ Y
Sbjct: 69 DHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL 127
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-------SVLHSQPKSTVGTPAYIA 167
S + HRDL N LL +T VKI DFG ++ V+ K A+ A
Sbjct: 128 ESKRFIHRDLAARNLLL--ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPF---AWCA 182
Query: 168 PEVLTKKEYDGKIADVWSCGVTLYVMLV-GAYPF 200
PE L + + +D W GVTL+ M G P+
Sbjct: 183 PESLKTRTF-SHASDTWMFGVTLWEMFTYGQEPW 215
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 99/217 (45%), Gaps = 24/217 (11%)
Query: 22 RDKWTRELLAVKF---IERGQKIDEHVQREIMNHRSLKHPNIVRF--KEVLLTPTHLAIV 76
R K T +L A+K I + +D + RE + L H NIV+ E T H ++
Sbjct: 29 RHKKTGDLFAIKVFNNISFLRPVDVQM-REFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87
Query: 77 MEYAAGGELF---ERICNAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLL-- 131
ME+ G L+ E NA E E + ++ G+++ I HR++K N +
Sbjct: 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVI 147
Query: 132 --DGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTK--------KEYDGKIA 181
DG + K+ DFG ++ Q S GT Y+ P++ + K+Y G
Sbjct: 148 GEDGQSV--YKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKY-GATV 204
Query: 182 DVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILS 218
D+WS GVT Y G+ PF E P+ ++ + +I++
Sbjct: 205 DLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT 241
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 122/302 (40%), Gaps = 45/302 (14%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQR---EIMNHRSLKH 57
++RY+ +K IGSG G+ D +A+K + R + H +R E++ + + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNH 82
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFE-RICNAGRFSEDEAR--FFFQQLISGVSYC 114
NI+ V L + EL + + + D R + Q++ G+ +
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGIKHL 142
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKK 174
HS I HRDLK N ++ +KI DFG ++++ V T Y APEV+
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDXT--LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 175 EYDGKIADVWSCGVTLYVMLVGA--YPFED----------------PEDPKNFRKTI--- 213
Y + D+WS G + M+ +P D PE K + T+
Sbjct: 201 GYKENV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 259
Query: 214 --GRILSVHYSFPDYVRVSL-------------ECKHLLSRIFVANSEKRITIPEIKNHP 258
R +FP SL + + LLS++ V + KRI++ + HP
Sbjct: 260 VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 319
Query: 259 WF 260
+
Sbjct: 320 YI 321
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 93/211 (44%), Gaps = 29/211 (13%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFI-----ERGQKIDEHVQREIMNHRSLK- 56
RYE V +IG G +G RD + +A+K + E G I RE+ R L+
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPIS--TVREVALLRRLEA 62
Query: 57 --HPNIVRFKEVLLTP-THLAIVMEYAAGGELFERICNAGRFSEDEA----------RFF 103
HPN+VR +V T T I + +FE + R D+A +
Sbjct: 63 FEHPNVVRLMDVCATSRTDREIKVTL-----VFEHVDQDLRTYLDKAPPPGLPAETIKDL 117
Query: 104 FQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTP 163
+Q + G+ + H+ I HRDLK EN L+ ++ VK+ DFG ++ V T
Sbjct: 118 MRQFLRGLDFLHANCIVHRDLKPENILV--TSGGTVKLADFGLARIYSYQMALDPVVVTL 175
Query: 164 AYIAPEVLTKKEYDGKIADVWSCGVTLYVML 194
Y APEVL + Y + D+WS G M
Sbjct: 176 WYRAPEVLLQSTYATPV-DMWSVGCIFAEMF 205
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 93/211 (44%), Gaps = 29/211 (13%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFI-----ERGQKIDEHVQREIMNHRSLK- 56
RYE V +IG G +G RD + +A+K + E G I RE+ R L+
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPIS--TVREVALLRRLEA 62
Query: 57 --HPNIVRFKEVLLTP-THLAIVMEYAAGGELFERICNAGRFSEDEA----------RFF 103
HPN+VR +V T T I + +FE + R D+A +
Sbjct: 63 FEHPNVVRLMDVCATSRTDREIKVTL-----VFEHVDQDLRTYLDKAPPPGLPAETIKDL 117
Query: 104 FQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTP 163
+Q + G+ + H+ I HRDLK EN L+ ++ VK+ DFG ++ V T
Sbjct: 118 MRQFLRGLDFLHANCIVHRDLKPENILV--TSGGTVKLADFGLARIYSYQMALAPVVVTL 175
Query: 164 AYIAPEVLTKKEYDGKIADVWSCGVTLYVML 194
Y APEVL + Y + D+WS G M
Sbjct: 176 WYRAPEVLLQSTYATPV-DMWSVGCIFAEMF 205
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 29/214 (13%)
Query: 6 IVKDIGSGNFGVAKLVRDKWTR----------ELLAVKFIERGQKIDEHVQREIMNHRSL 55
+++ +G G+FGV + R +W + L + + + +D+ + RE+ SL
Sbjct: 16 LLEKLGDGSFGVVR--RGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFI-REVNAMHSL 72
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERI-CNAGRFSEDEARFFFQQLISGVSYC 114
H N++R V+LTP + +V E A G L +R+ + G F + Q+ G+ Y
Sbjct: 73 DHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL 131
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-------SVLHSQPKSTVGTPAYIA 167
S + HRDL N LL +T VKI DFG ++ V+ K A+ A
Sbjct: 132 ESKRFIHRDLAARNLLL--ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPF---AWCA 186
Query: 168 PEVLTKKEYDGKIADVWSCGVTLYVMLV-GAYPF 200
PE L + + +D W GVTL+ M G P+
Sbjct: 187 PESLKTRTF-SHASDTWMFGVTLWEMFTYGQEPW 219
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 92/214 (42%), Gaps = 19/214 (8%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKH----- 57
RYE++K IG G+FG D + +A+K + ++ EI R L+H
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEI---RILEHLRKQD 154
Query: 58 ----PNIVRFKEVLLTPTHLAIVMEYAAGG--ELFERICNAGRFSEDEARFFFQQLISGV 111
N++ E H+ + E + EL ++ G FS R F ++ +
Sbjct: 155 KDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQG-FSLPLVRKFAHSILQCL 213
Query: 112 SYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL 171
H +I H DLK EN LL +K+ DFG S H + + + + Y APEV+
Sbjct: 214 DALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG--SSCYEHQRVYTXIQSRFYRAPEVI 271
Query: 172 TKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPED 205
Y G D+WS G L +L G YP ED
Sbjct: 272 LGARY-GMPIDMWSLGCILAELLTG-YPLLPGED 303
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 92/214 (42%), Gaps = 19/214 (8%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKH----- 57
RYE++K IG G+FG D + +A+K + ++ EI R L+H
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEI---RILEHLRKQD 154
Query: 58 ----PNIVRFKEVLLTPTHLAIVMEYAAGG--ELFERICNAGRFSEDEARFFFQQLISGV 111
N++ E H+ + E + EL ++ G FS R F ++ +
Sbjct: 155 KDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQG-FSLPLVRKFAHSILQCL 213
Query: 112 SYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL 171
H +I H DLK EN LL +K+ DFG S H + + + + Y APEV+
Sbjct: 214 DALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG--SSCYEHQRVYTXIQSRFYRAPEVI 271
Query: 172 TKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPED 205
Y G D+WS G L +L G YP ED
Sbjct: 272 LGARY-GMPIDMWSLGCILAELLTG-YPLLPGED 303
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 91/202 (45%), Gaps = 17/202 (8%)
Query: 7 VKDIGSGNFGVAKLVR----DKWTRELLAVKFIER-GQKIDEHVQREIMNHRSLKHPNIV 61
+ +G GNFG +L R T L+AVK ++ G QREI ++L IV
Sbjct: 12 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIV 71
Query: 62 RFKEVLLTP--THLAIVMEYAAGGELFERIC-NAGRFSEDEARFFFQQLISGVSYCHSMQ 118
+++ V P L +VMEY G L + + + R + Q+ G+ Y S +
Sbjct: 72 KYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR 131
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA-----YIAPEVLTK 173
HRDL N L++ VKI DFG +K L + V P + APE L+
Sbjct: 132 CVHRDLAARNILVESEA--HVKIADFGLAKLLPL-DKDXXVVREPGQSPIFWYAPESLSD 188
Query: 174 KEYDGKIADVWSCGVTLYVMLV 195
+ + +DVWS GV LY +
Sbjct: 189 NIF-SRQSDVWSFGVVLYELFT 209
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 101/209 (48%), Gaps = 23/209 (11%)
Query: 8 KDIGSGNFG---VAKLVRDKWTREL-LAVKFIERG----QKIDEHVQREIMNHRSLKHPN 59
K IG+G FG L +E+ +A+K ++ G Q++D + IM S H N
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFS--HHN 107
Query: 60 IVRFKEVLLTPTHLAIVMEYAAGGELFERICNA-GRFSEDEARFFFQQLISGVSYCHSMQ 118
I+R + V+ + I+ EY G L + + G FS + + + +G+ Y +M
Sbjct: 108 IIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMN 167
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA------YIAPEVLT 172
HRDL N L++ + K+ DFG S+ VL P++T T + APE ++
Sbjct: 168 YVHRDLAARNILVNSNLV--CKVSDFGLSR--VLEDDPEATYTTSGGKIPIRWTAPEAIS 223
Query: 173 KKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
+++ +DVWS G+ ++ VM G P+
Sbjct: 224 YRKFTSA-SDVWSFGIVMWEVMTYGERPY 251
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 103/250 (41%), Gaps = 37/250 (14%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRF 63
+E + +G G FG R+ A+K I ++ + E+ SL H +VR+
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVRY 67
Query: 64 KEVLL-------------TPTHLAIVMEYAAGGELFERICNAGRFSE-DEARFFFQQLIS 109
L + L I EY L++ I + + DE F+Q++
Sbjct: 68 YAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILE 127
Query: 110 GVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSS-------VLHSQP------ 156
+SY HS I HR+LK N +D S VKI DFG +K+ L SQ
Sbjct: 128 ALSYIHSQGIIHRNLKPXNIFIDESR--NVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 157 --KSTVGTPAYIAPEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIG 214
S +GT Y+A EVL + + D +S G+ + + YPF + N K
Sbjct: 186 NLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI---YPFSTGXERVNILK--- 239
Query: 215 RILSVHYSFP 224
++ SV FP
Sbjct: 240 KLRSVSIEFP 249
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 93/211 (44%), Gaps = 29/211 (13%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFI-----ERGQKIDEHVQREIMNHRSLK- 56
RYE V +IG G +G RD + +A+K + E G I RE+ R L+
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPIS--TVREVALLRRLEA 62
Query: 57 --HPNIVRFKEVLLTP-THLAIVMEYAAGGELFERICNAGRFSEDEA----------RFF 103
HPN+VR +V T T I + +FE + R D+A +
Sbjct: 63 FEHPNVVRLMDVCATSRTDREIKVTL-----VFEHVDQDLRTYLDKAPPPGLPAETIKDL 117
Query: 104 FQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTP 163
+Q + G+ + H+ I HRDLK EN L+ ++ VK+ DFG ++ V T
Sbjct: 118 MRQFLRGLDFLHANCIVHRDLKPENILV--TSGGTVKLADFGLARIYSYQMALFPVVVTL 175
Query: 164 AYIAPEVLTKKEYDGKIADVWSCGVTLYVML 194
Y APEVL + Y + D+WS G M
Sbjct: 176 WYRAPEVLLQSTYATPV-DMWSVGCIFAEMF 205
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 106/237 (44%), Gaps = 47/237 (19%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIV 61
++Y + K +G+G+FG+ V D + + A+K + + + + RE+ + L H NI+
Sbjct: 7 KKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR---YKNRELDIMKVLDHVNII 63
Query: 62 RF-----------------------------------KEVLLTPT---HLAIVMEYAAGG 83
+ K V++ P+ +L ++MEY
Sbjct: 64 KLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDT 123
Query: 84 --ELFERICNAGR-FSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVK 140
++ + +GR + + QL V + HS+ ICHRD+K +N L++ S +K
Sbjct: 124 LHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVN-SKDNTLK 182
Query: 141 ICDFGYSKSSVLHSQPKSTVGTPAYIAPEV-LTKKEYDGKIADVWSCGVTLYVMLVG 196
+CDFG +K + + + + Y APE+ L EY I D+WS G +++G
Sbjct: 183 LCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSI-DLWSIGCVFGELILG 238
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 91/202 (45%), Gaps = 17/202 (8%)
Query: 7 VKDIGSGNFGVAKLVR----DKWTRELLAVKFIER-GQKIDEHVQREIMNHRSLKHPNIV 61
+ +G GNFG +L R T L+AVK ++ G QREI ++L IV
Sbjct: 16 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIV 75
Query: 62 RFKEVLLTP--THLAIVMEYAAGGELFERIC-NAGRFSEDEARFFFQQLISGVSYCHSMQ 118
+++ V P L +VMEY G L + + + R + Q+ G+ Y S +
Sbjct: 76 KYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR 135
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA-----YIAPEVLTK 173
HRDL N L++ VKI DFG +K L + V P + APE L+
Sbjct: 136 CVHRDLAARNILVESEA--HVKIADFGLAKLLPL-DKDYYVVREPGQSPIFWYAPESLSD 192
Query: 174 KEYDGKIADVWSCGVTLYVMLV 195
+ + +DVWS GV LY +
Sbjct: 193 NIFS-RQSDVWSFGVVLYELFT 213
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 91/202 (45%), Gaps = 17/202 (8%)
Query: 7 VKDIGSGNFGVAKLVR----DKWTRELLAVKFIER-GQKIDEHVQREIMNHRSLKHPNIV 61
+ +G GNFG +L R T L+AVK ++ G QREI ++L IV
Sbjct: 28 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIV 87
Query: 62 RFKEVLLTP--THLAIVMEYAAGGELFERIC-NAGRFSEDEARFFFQQLISGVSYCHSMQ 118
+++ V P L +VMEY G L + + + R + Q+ G+ Y S +
Sbjct: 88 KYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR 147
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA-----YIAPEVLTK 173
HRDL N L++ VKI DFG +K L + V P + APE L+
Sbjct: 148 CVHRDLAARNILVESEA--HVKIADFGLAKLLPL-DKDYYVVREPGQSPIFWYAPESLSD 204
Query: 174 KEYDGKIADVWSCGVTLYVMLV 195
+ + +DVWS GV LY +
Sbjct: 205 NIFS-RQSDVWSFGVVLYELFT 225
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 91/202 (45%), Gaps = 17/202 (8%)
Query: 7 VKDIGSGNFGVAKLVR----DKWTRELLAVKFIER-GQKIDEHVQREIMNHRSLKHPNIV 61
+ +G GNFG +L R T L+AVK ++ G QREI ++L IV
Sbjct: 15 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIV 74
Query: 62 RFKEVLLTP--THLAIVMEYAAGGELFERIC-NAGRFSEDEARFFFQQLISGVSYCHSMQ 118
+++ V P L +VMEY G L + + + R + Q+ G+ Y S +
Sbjct: 75 KYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR 134
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA-----YIAPEVLTK 173
HRDL N L++ VKI DFG +K L + V P + APE L+
Sbjct: 135 CVHRDLAARNILVESEA--HVKIADFGLAKLLPL-DKDYYVVREPGQSPIFWYAPESLSD 191
Query: 174 KEYDGKIADVWSCGVTLYVMLV 195
+ + +DVWS GV LY +
Sbjct: 192 NIF-SRQSDVWSFGVVLYELFT 212
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 102/211 (48%), Gaps = 24/211 (11%)
Query: 6 IVKDIGSGNFGVAKLVRDKW--TREL-LAVKFIERGQKIDEHVQREIMNHRSL----KHP 58
I K +G+G FG R K +E+ +A+K ++ G E +R+ + S+ HP
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT--EKQRRDFLGEASIMGQFDHP 106
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGEL--FERICNAGRFSEDEARFFFQQLISGVSYCHS 116
NI+R + V+ + IV EY G L F R +A +F+ + + + SG+ Y
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA-QFTVIQLVGMLRGIASGMKYLSD 165
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA------YIAPEV 170
M HRDL N L++ + K+ DFG S+ VL P++ T + +PE
Sbjct: 166 MGFVHRDLAARNILINSNLV--CKVSDFGLSR--VLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 171 LTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
+ +++ +DVWS G+ L+ VM G P+
Sbjct: 222 IAYRKFTSA-SDVWSYGIVLWEVMSYGERPY 251
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 107/242 (44%), Gaps = 24/242 (9%)
Query: 10 IGSGNFGV---AKLVRDKWTRELLAVKFIERGQKID--EHVQREIMNHRSLKHPNIVRFK 64
IG G+FGV + + R A+K + R ++ E RE + R L HPN++
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 65 EVLLTPTHLA-IVMEYAAGGELFERICNAGRF-SEDEARFFFQQLISGVSYCHSMQICHR 122
++L P L +++ Y G+L + I + R + + F Q+ G+ Y + HR
Sbjct: 89 GIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHR 148
Query: 123 DLKLENTLLDGSTAPRVKICDFGYSK--------SSVLHSQPKSTVGTPAYIAPEVLTKK 174
DL N +LD S VK+ DFG ++ S H + V + A E L
Sbjct: 149 DLAARNCMLDESFT--VKVADFGLARDILDREYYSVQQHRHARLPV---KWTALESLQTY 203
Query: 175 EYDGKIADVWSCGVTLYVMLV-GAYPFE--DPEDPKNFRKTIGRILSVHYSFPDYVRVSL 231
+ K +DVWS GV L+ +L GA P+ DP D +F R+ Y +V
Sbjct: 204 RFTTK-SDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPDSLYQVMQ 262
Query: 232 EC 233
+C
Sbjct: 263 QC 264
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 120/269 (44%), Gaps = 21/269 (7%)
Query: 5 EIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIM-----NHRSLKHPN 59
E + ++G G +GV + R + ++ AVK I ++ Q+ ++ + R++ P
Sbjct: 37 EPIXELGRGAYGVVEKXRHVPSGQIXAVKRIR--ATVNSQEQKRLLXDLDISXRTVDCPF 94
Query: 60 IVRFKEVLLTPTHLAIVMEY--AAGGELFERICNAGR-FSEDEARFFFQQLISGVSYCHS 116
V F L + I E + + ++++ + G+ ED ++ + + HS
Sbjct: 95 TVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS 154
Query: 117 -MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPE----VL 171
+ + HRD+K N L++ +VK CDFG S V G Y APE L
Sbjct: 155 KLSVIHRDVKPSNVLINA--LGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPERINPEL 212
Query: 172 TKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSL 231
+K Y K +D+WS G+T + + +P++ P F++ + P + S
Sbjct: 213 NQKGYSVK-SDIWSLGITXIELAILRFPYDSWGTP--FQQLKQVVEEPSPQLP-ADKFSA 268
Query: 232 ECKHLLSRIFVANSEKRITIPEIKNHPWF 260
E S+ NS++R T PE+ HP+F
Sbjct: 269 EFVDFTSQCLKKNSKERPTYPELXQHPFF 297
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 24/217 (11%)
Query: 22 RDKWTRELLAVKF---IERGQKIDEHVQREIMNHRSLKHPNIVRF--KEVLLTPTHLAIV 76
R K T +L A+K I + +D + RE + L H NIV+ E T H ++
Sbjct: 29 RHKKTGDLFAIKVFNNISFLRPVDVQM-REFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87
Query: 77 MEYAAGGELF---ERICNAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLL-- 131
ME+ G L+ E NA E E + ++ G+++ I HR++K N +
Sbjct: 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVI 147
Query: 132 --DGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTK--------KEYDGKIA 181
DG + K+ DFG ++ Q GT Y+ P++ + K+Y G
Sbjct: 148 GEDGQSV--YKLTDFGAARELEDDEQFVXLYGTEEYLHPDMYERAVLRKDHQKKY-GATV 204
Query: 182 DVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILS 218
D+WS GVT Y G+ PF E P+ ++ + +I++
Sbjct: 205 DLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT 241
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 119/262 (45%), Gaps = 18/262 (6%)
Query: 9 DIGSGNFG-VAKLVRDKWTRELLAVKFIERGQKIDEH--VQREIMNHRSLKHPNIVRFKE 65
+IG G+F V K + + T E+ + +R E + E + L+HPNIVRF +
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 66 VLLTPTH----LAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQ--I 119
+ + +V E G L + R + +Q++ G+ + H+ I
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRTPPI 152
Query: 120 CHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGK 179
HRDLK +N + G T VKI D G + + S K+ +GTP + APE +K YD
Sbjct: 153 IHRDLKCDNIFITGPTGS-VKIGDLGLA-TLKRASFAKAVIGTPEFXAPEXYEEK-YDES 209
Query: 180 IADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSL-ECKHLLS 238
+ DV++ G YP+ + ++ I R ++ + +V++ E K ++
Sbjct: 210 V-DVYAFGXCXLEXATSEYPYSECQNAAQ----IYRRVTSGVKPASFDKVAIPEVKEIIE 264
Query: 239 RIFVANSEKRITIPEIKNHPWF 260
N ++R +I ++ NH +F
Sbjct: 265 GCIRQNKDERYSIKDLLNHAFF 286
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 102/211 (48%), Gaps = 24/211 (11%)
Query: 6 IVKDIGSGNFGVAKLVRDKW--TREL-LAVKFIERGQKIDEHVQREIMNHRSL----KHP 58
I K +G+G FG R K +E+ +A+K ++ G E +R+ + S+ HP
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT--EKQRRDFLGEASIMGQFDHP 106
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGEL--FERICNAGRFSEDEARFFFQQLISGVSYCHS 116
NI+R + V+ + IV EY G L F R +A +F+ + + + SG+ Y
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA-QFTVIQLVGMLRGIASGMKYLSD 165
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA------YIAPEV 170
M HRDL N L++ + K+ DFG S+ VL P++ T + +PE
Sbjct: 166 MGYVHRDLAARNILINSNLV--CKVSDFGLSR--VLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 171 LTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
+ +++ +DVWS G+ L+ VM G P+
Sbjct: 222 IAYRKFTSA-SDVWSYGIVLWEVMSYGERPY 251
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 102/211 (48%), Gaps = 24/211 (11%)
Query: 6 IVKDIGSGNFGVAKLVRDKW--TREL-LAVKFIERGQKIDEHVQREIMNHRSL----KHP 58
I K +G+G FG R K +E+ +A+K ++ G E +R+ + S+ HP
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT--EKQRRDFLGEASIMGQFDHP 106
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGEL--FERICNAGRFSEDEARFFFQQLISGVSYCHS 116
NI+R + V+ + IV EY G L F R +A +F+ + + + SG+ Y
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA-QFTVIQLVGMLRGIASGMKYLSD 165
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA------YIAPEV 170
M HRDL N L++ + K+ DFG S+ VL P++ T + +PE
Sbjct: 166 MGYVHRDLAARNILINSNLV--CKVSDFGLSR--VLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 171 LTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
+ +++ +DVWS G+ L+ VM G P+
Sbjct: 222 IAYRKFTSA-SDVWSYGIVLWEVMSYGERPY 251
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 90/214 (42%), Gaps = 19/214 (8%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKH----- 57
RYE++K IG G FG D + +A+K + ++ EI R L+H
Sbjct: 98 RYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEI---RILEHLRKQD 154
Query: 58 ----PNIVRFKEVLLTPTHLAIVMEYAAGG--ELFERICNAGRFSEDEARFFFQQLISGV 111
N++ E H+ + E + EL ++ G FS R F ++ +
Sbjct: 155 KDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQG-FSLPLVRKFAHSILQCL 213
Query: 112 SYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL 171
H +I H DLK EN LL +K+ DFG S H + + + Y APEV+
Sbjct: 214 DALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG--SSCYEHQRVYXXIQSRFYRAPEVI 271
Query: 172 TKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPED 205
Y G D+WS G L +L G YP ED
Sbjct: 272 LGARY-GMPIDMWSLGCILAELLTG-YPLLPGED 303
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 98/210 (46%), Gaps = 27/210 (12%)
Query: 9 DIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNH-----RSLKHPNIVRF 63
+IG G +G + K + +++AVK I +DE Q++++ RS P IV+F
Sbjct: 29 EIGRGAYGSVNKMVHKPSGQIMAVKRIR--STVDEKEQKQLLMDLDVVMRSSDCPYIVQF 86
Query: 64 KEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYC--------- 114
L I ME + F++ D+ ++++ ++
Sbjct: 87 YGALFREGDCWICMELMSTS--FDKFYKYVYSVLDDV--IPEEILGKITLATVKALNHLK 142
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL--- 171
+++I HRD+K N LLD S +K+CDFG S V G Y+APE +
Sbjct: 143 ENLKIIHRDIKPSNILLDRSG--NIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPS 200
Query: 172 -TKKEYDGKIADVWSCGVTLYVMLVGAYPF 200
+++ YD + +DVWS G+TLY + G +P+
Sbjct: 201 ASRQGYDVR-SDVWSLGITLYELATGRFPY 229
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 102/211 (48%), Gaps = 24/211 (11%)
Query: 6 IVKDIGSGNFGVAKLVRDKW--TREL-LAVKFIERGQKIDEHVQREIMNHRSL----KHP 58
I K +G+G FG R K +E+ +A+K ++ G E +R+ + S+ HP
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT--EKQRRDFLGEASIMGQFDHP 106
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGEL--FERICNAGRFSEDEARFFFQQLISGVSYCHS 116
NI+R + V+ + IV EY G L F R +A +F+ + + + SG+ Y
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA-QFTVIQLVGMLRGIASGMKYLSD 165
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA------YIAPEV 170
M HRDL N L++ + K+ DFG S+ VL P++ T + +PE
Sbjct: 166 MGYVHRDLAARNILINSNLV--CKVSDFGLSR--VLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 171 LTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
+ +++ +DVWS G+ L+ VM G P+
Sbjct: 222 IAYRKFTSA-SDVWSYGIVLWEVMSYGERPY 251
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 102/211 (48%), Gaps = 24/211 (11%)
Query: 6 IVKDIGSGNFGVAKLVRDKW--TREL-LAVKFIERGQKIDEHVQREIMNHRSL----KHP 58
I K +G+G FG R K +E+ +A+K ++ G E +R+ + S+ HP
Sbjct: 37 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT--EKQRRDFLGEASIMGQFDHP 94
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGEL--FERICNAGRFSEDEARFFFQQLISGVSYCHS 116
NI+R + V+ + IV EY G L F R +A +F+ + + + SG+ Y
Sbjct: 95 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA-QFTVIQLVGMLRGIASGMKYLSD 153
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA------YIAPEV 170
M HRDL N L++ + K+ DFG S+ VL P++ T + +PE
Sbjct: 154 MGYVHRDLAARNILINSNLV--CKVSDFGLSR--VLEDDPEAAYTTRGGKIPIRWTSPEA 209
Query: 171 LTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
+ +++ +DVWS G+ L+ VM G P+
Sbjct: 210 IAYRKFTSA-SDVWSYGIVLWEVMSYGERPY 239
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 102/211 (48%), Gaps = 24/211 (11%)
Query: 6 IVKDIGSGNFGVAKLVRDKW--TREL-LAVKFIERGQKIDEHVQREIMNHRSL----KHP 58
I K +G+G FG R K +E+ +A+K ++ G E +R+ + S+ HP
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT--EKQRRDFLGEASIMGQFDHP 106
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGEL--FERICNAGRFSEDEARFFFQQLISGVSYCHS 116
NI+R + V+ + IV EY G L F R +A +F+ + + + SG+ Y
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA-QFTVIQLVGMLRGIASGMKYLSD 165
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA------YIAPEV 170
M HRDL N L++ + K+ DFG S+ VL P++ T + +PE
Sbjct: 166 MGYVHRDLAARNILINSNLV--CKVSDFGLSR--VLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 171 LTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
+ +++ +DVWS G+ L+ VM G P+
Sbjct: 222 IAYRKFTSA-SDVWSYGIVLWEVMSYGERPY 251
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 132/304 (43%), Gaps = 57/304 (18%)
Query: 4 YEIVKDIGSGNFG-VAKLVRDKWTRELLAVKFIE----RGQKIDEHVQREI--MNHRSLK 56
Y I+K IGSG V +++ +K +++ A+K++ Q +D + + EI +N
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEK--KQIYAIKYVNLEEADNQTLDSY-RNEIAYLNKLQQH 114
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
I+R + +T ++ +VME +L + E + +++ ++ V H
Sbjct: 115 SDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 173
Query: 117 MQICHRDLKLENTLL-DGSTAPRVKICDFGYSKSSVLHSQPKST-------VGTPAYIAP 168
I H DLK N L+ DG +K+ DFG + QP +T VGT Y+ P
Sbjct: 174 HGIVHSDLKPANFLIVDG----MLKLIDFGIAN----QMQPDTTSVVKDSQVGTVNYMPP 225
Query: 169 EV---LTKKEYDGKIA-------DVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILS 218
E ++ +GK DVWS G LY M G PF+ + I +I
Sbjct: 226 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ---------QIINQISK 276
Query: 219 VH--------YSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWF-LRNLPIELT 269
+H FPD L+ +L + ++RI+IPE+ HP+ ++ P+
Sbjct: 277 LHAIIDPNHEIEFPDIPEKDLQ--DVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQM 334
Query: 270 EGGS 273
G+
Sbjct: 335 AKGT 338
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 102/211 (48%), Gaps = 24/211 (11%)
Query: 6 IVKDIGSGNFGVAKLVRDKW--TREL-LAVKFIERGQKIDEHVQREIMNHRSL----KHP 58
I K +G+G FG R K +E+ +A+K ++ G E +R+ + S+ HP
Sbjct: 47 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT--EKQRRDFLGEASIMGQFDHP 104
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGEL--FERICNAGRFSEDEARFFFQQLISGVSYCHS 116
NI+R + V+ + IV EY G L F R +A +F+ + + + SG+ Y
Sbjct: 105 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA-QFTVIQLVGMLRGIASGMKYLSD 163
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA------YIAPEV 170
M HRDL N L++ + K+ DFG S+ VL P++ T + +PE
Sbjct: 164 MGYVHRDLAARNILINSNLV--CKVSDFGLSR--VLEDDPEAAYTTRGGKIPIRWTSPEA 219
Query: 171 LTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
+ +++ +DVWS G+ L+ VM G P+
Sbjct: 220 IAYRKFTSA-SDVWSYGIVLWEVMSYGERPY 249
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 132/304 (43%), Gaps = 57/304 (18%)
Query: 4 YEIVKDIGSGNFG-VAKLVRDKWTRELLAVKFIE----RGQKIDEHVQREI--MNHRSLK 56
Y I+K IGSG V +++ +K +++ A+K++ Q +D + + EI +N
Sbjct: 14 YSILKQIGSGGSSKVFQVLNEK--KQIYAIKYVNLEEADNQTLDSY-RNEIAYLNKLQQH 70
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
I+R + +T ++ +VME +L + E + +++ ++ V H
Sbjct: 71 SDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 129
Query: 117 MQICHRDLKLENTLL-DGSTAPRVKICDFGYSKSSVLHSQPKST-------VGTPAYIAP 168
I H DLK N L+ DG +K+ DFG + QP +T VGT Y+ P
Sbjct: 130 HGIVHSDLKPANFLIVDG----MLKLIDFGIAN----QMQPDTTSVVKDSQVGTVNYMPP 181
Query: 169 EV---LTKKEYDGKIA-------DVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILS 218
E ++ +GK DVWS G LY M G PF+ + I +I
Sbjct: 182 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ---------QIINQISK 232
Query: 219 VH--------YSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWF-LRNLPIELT 269
+H FPD L+ +L + ++RI+IPE+ HP+ ++ P+
Sbjct: 233 LHAIIDPNHEIEFPDIPEKDLQ--DVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQM 290
Query: 270 EGGS 273
G+
Sbjct: 291 AKGT 294
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 132/304 (43%), Gaps = 57/304 (18%)
Query: 4 YEIVKDIGSGNFG-VAKLVRDKWTRELLAVKFIE----RGQKIDEHVQREI--MNHRSLK 56
Y I+K IGSG V +++ +K +++ A+K++ Q +D + + EI +N
Sbjct: 30 YSILKQIGSGGSSKVFQVLNEK--KQIYAIKYVNLEEADNQTLDSY-RNEIAYLNKLQQH 86
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
I+R + +T ++ +VME +L + E + +++ ++ V H
Sbjct: 87 SDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 145
Query: 117 MQICHRDLKLENTLL-DGSTAPRVKICDFGYSKSSVLHSQPKST-------VGTPAYIAP 168
I H DLK N L+ DG +K+ DFG + QP +T VGT Y+ P
Sbjct: 146 HGIVHSDLKPANFLIVDG----MLKLIDFGIAN----QMQPDTTSVVKDSQVGTVNYMPP 197
Query: 169 EV---LTKKEYDGKIA-------DVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILS 218
E ++ +GK DVWS G LY M G PF+ + I +I
Sbjct: 198 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ---------QIINQISK 248
Query: 219 VH--------YSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWF-LRNLPIELT 269
+H FPD L+ +L + ++RI+IPE+ HP+ ++ P+
Sbjct: 249 LHAIIDPNHEIEFPDIPEKDLQ--DVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQM 306
Query: 270 EGGS 273
G+
Sbjct: 307 AKGT 310
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 102/211 (48%), Gaps = 24/211 (11%)
Query: 6 IVKDIGSGNFGVAKLVRDKW--TREL-LAVKFIERGQKIDEHVQREIMNHRSL----KHP 58
I K +G+G FG R K +E+ +A+K ++ G E +R+ + S+ HP
Sbjct: 20 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT--EKQRRDFLGEASIMGQFDHP 77
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGEL--FERICNAGRFSEDEARFFFQQLISGVSYCHS 116
NI+R + V+ + IV EY G L F R +A +F+ + + + SG+ Y
Sbjct: 78 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA-QFTVIQLVGMLRGIASGMKYLSD 136
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA------YIAPEV 170
M HRDL N L++ + K+ DFG S+ VL P++ T + +PE
Sbjct: 137 MGYVHRDLAARNILINSNLV--CKVSDFGLSR--VLEDDPEAAYTTRGGKIPIRWTSPEA 192
Query: 171 LTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
+ +++ +DVWS G+ L+ VM G P+
Sbjct: 193 IAYRKFTSA-SDVWSYGIVLWEVMSYGERPY 222
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 97/224 (43%), Gaps = 34/224 (15%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIER--GQKID-EHVQREIMNHRSLKHP 58
+ Y I IG G++G L DK T + +A+K + R ID + + REI LK
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 85
Query: 59 NIVRFKEV-----LLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
I+R ++ LL L IV+E A +L + +E+ + L+ G ++
Sbjct: 86 YIIRLYDLIIPDDLLKFDELYIVLE-IADSDLKKLFKTPIFLTEEHIKTILYNLLLGENF 144
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-----------------------S 150
H I HRDLK N LL+ + VK+CDFG +++
Sbjct: 145 IHESGIIHRDLKPANCLLNQDCS--VKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNK 202
Query: 151 VLHSQPKSTVGTPAYIAPEVLTKKEYDGKIADVWSCGVTLYVML 194
L Q S V T Y APE++ +E K D+WS G +L
Sbjct: 203 NLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELL 246
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 132/304 (43%), Gaps = 57/304 (18%)
Query: 4 YEIVKDIGSGNFG-VAKLVRDKWTRELLAVKFIE----RGQKIDEHVQREI--MNHRSLK 56
Y I+K IGSG V +++ +K +++ A+K++ Q +D + + EI +N
Sbjct: 11 YSILKQIGSGGSSKVFQVLNEK--KQIYAIKYVNLEEADNQTLDSY-RNEIAYLNKLQQH 67
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
I+R + +T ++ +VME +L + E + +++ ++ V H
Sbjct: 68 SDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 126
Query: 117 MQICHRDLKLENTLL-DGSTAPRVKICDFGYSKSSVLHSQPKST-------VGTPAYIAP 168
I H DLK N L+ DG +K+ DFG + QP +T VGT Y+ P
Sbjct: 127 HGIVHSDLKPANFLIVDG----MLKLIDFGIAN----QMQPDTTSVVKDSQVGTVNYMPP 178
Query: 169 EV---LTKKEYDGKIA-------DVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILS 218
E ++ +GK DVWS G LY M G PF+ + I +I
Sbjct: 179 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ---------QIINQISK 229
Query: 219 VH--------YSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWF-LRNLPIELT 269
+H FPD L+ +L + ++RI+IPE+ HP+ ++ P+
Sbjct: 230 LHAIIDPNHEIEFPDIPEKDLQ--DVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQM 287
Query: 270 EGGS 273
G+
Sbjct: 288 AKGT 291
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 132/304 (43%), Gaps = 57/304 (18%)
Query: 4 YEIVKDIGSGNFG-VAKLVRDKWTRELLAVKFIE----RGQKIDEHVQREI--MNHRSLK 56
Y I+K IGSG V +++ +K +++ A+K++ Q +D + + EI +N
Sbjct: 10 YSILKQIGSGGSSKVFQVLNEK--KQIYAIKYVNLEEADNQTLDSY-RNEIAYLNKLQQH 66
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
I+R + +T ++ +VME +L + E + +++ ++ V H
Sbjct: 67 SDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 125
Query: 117 MQICHRDLKLENTLL-DGSTAPRVKICDFGYSKSSVLHSQPKST-------VGTPAYIAP 168
I H DLK N L+ DG +K+ DFG + QP +T VGT Y+ P
Sbjct: 126 HGIVHSDLKPANFLIVDG----MLKLIDFGIAN----QMQPDTTSVVKDSQVGTVNYMPP 177
Query: 169 EV---LTKKEYDGKIA-------DVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILS 218
E ++ +GK DVWS G LY M G PF+ + I +I
Sbjct: 178 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ---------QIINQISK 228
Query: 219 VH--------YSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWF-LRNLPIELT 269
+H FPD L+ +L + ++RI+IPE+ HP+ ++ P+
Sbjct: 229 LHAIIDPNHEIEFPDIPEKDLQ--DVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQM 286
Query: 270 EGGS 273
G+
Sbjct: 287 AKGT 290
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 57/98 (58%), Gaps = 5/98 (5%)
Query: 105 QQLISGVSYCHSMQ-ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTP 163
+ +++ SY H+ + ICHRD+K N L+D + RVK+ DFG S+ V + K + GT
Sbjct: 158 KSVLNSFSYIHNEKNICHRDVKPSNILMDKN--GRVKLSDFGESEYMV-DKKIKGSRGTY 214
Query: 164 AYIAPEVLTKKE-YDGKIADVWSCGVTLYVMLVGAYPF 200
++ PE + + Y+G D+WS G+ LYVM PF
Sbjct: 215 EFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPF 252
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 132/304 (43%), Gaps = 57/304 (18%)
Query: 4 YEIVKDIGSGNFG-VAKLVRDKWTRELLAVKFIE----RGQKIDEHVQREI--MNHRSLK 56
Y I+K IGSG V +++ +K +++ A+K++ Q +D + + EI +N
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEK--KQIYAIKYVNLEEADNQTLDSY-RNEIAYLNKLQQH 114
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
I+R + +T ++ +VME +L + E + +++ ++ V H
Sbjct: 115 SDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 173
Query: 117 MQICHRDLKLENTLL-DGSTAPRVKICDFGYSKSSVLHSQPKST-------VGTPAYIAP 168
I H DLK N L+ DG +K+ DFG + QP +T VGT Y+ P
Sbjct: 174 HGIVHSDLKPANFLIVDG----MLKLIDFGIAN----QMQPDTTSVVKDSQVGTVNYMPP 225
Query: 169 EV---LTKKEYDGKIA-------DVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILS 218
E ++ +GK DVWS G LY M G PF+ + I +I
Sbjct: 226 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ---------QIINQISK 276
Query: 219 VH--------YSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWF-LRNLPIELT 269
+H FPD L+ +L + ++RI+IPE+ HP+ ++ P+
Sbjct: 277 LHAIIDPNHEIEFPDIPEKDLQ--DVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQM 334
Query: 270 EGGS 273
G+
Sbjct: 335 AKGT 338
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 98/209 (46%), Gaps = 22/209 (10%)
Query: 10 IGSGNFG---VAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSL----KHPNIVR 62
IG+G FG +L +A+K ++ G E +RE ++ S+ +HPNI+R
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYT--ERQRREFLSEASIMGQFEHPNIIR 81
Query: 63 FKEVLLTPTHLAIVMEYAAGGEL--FERICNAGRFSEDEARFFFQQLISGVSYCHSMQIC 120
+ V+ + I+ E+ G L F R+ N G+F+ + + + SG+ Y M
Sbjct: 82 LEGVVTNSMPVMILTEFMENGALDSFLRL-NDGQFTVIQLVGMLRGIASGMRYLAEMSYV 140
Query: 121 HRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA------YIAPEVLTKK 174
HRDL N L++ + K+ DFG S+ +S + + + APE + +
Sbjct: 141 HRDLAARNILVNSNLV--CKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFR 198
Query: 175 EYDGKIADVWSCGVTLY-VMLVGAYPFED 202
++ +D WS G+ ++ VM G P+ D
Sbjct: 199 KFTSA-SDAWSYGIVMWEVMSFGERPYWD 226
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 98/209 (46%), Gaps = 22/209 (10%)
Query: 10 IGSGNFG---VAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSL----KHPNIVR 62
IG+G FG +L +A+K ++ G E +RE ++ S+ +HPNI+R
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYT--ERQRREFLSEASIMGQFEHPNIIR 79
Query: 63 FKEVLLTPTHLAIVMEYAAGGEL--FERICNAGRFSEDEARFFFQQLISGVSYCHSMQIC 120
+ V+ + I+ E+ G L F R+ N G+F+ + + + SG+ Y M
Sbjct: 80 LEGVVTNSMPVMILTEFMENGALDSFLRL-NDGQFTVIQLVGMLRGIASGMRYLAEMSYV 138
Query: 121 HRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA------YIAPEVLTKK 174
HRDL N L++ + K+ DFG S+ +S + + + APE + +
Sbjct: 139 HRDLAARNILVNSNLV--CKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFR 196
Query: 175 EYDGKIADVWSCGVTLY-VMLVGAYPFED 202
++ +D WS G+ ++ VM G P+ D
Sbjct: 197 KFTSA-SDAWSYGIVMWEVMSFGERPYWD 224
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 102/211 (48%), Gaps = 24/211 (11%)
Query: 6 IVKDIGSGNFGVAKLVRDKW--TREL-LAVKFIERGQKIDEHVQREIMNHRSL----KHP 58
I K +G+G FG R K +E+ +A+K ++ G E +R+ + S+ HP
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT--EKQRRDFLGEASIMGQFDHP 106
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGEL--FERICNAGRFSEDEARFFFQQLISGVSYCHS 116
NI+R + V+ + IV EY G L F R +A +F+ + + + SG+ Y
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA-QFTVIQLVGMLRGIASGMKYLSD 165
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA------YIAPEV 170
M HRDL N L++ + K+ DFG ++ VL P++ T + +PE
Sbjct: 166 MGYVHRDLAARNILINSNLV--CKVSDFGLAR--VLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 171 LTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
+ +++ +DVWS G+ L+ VM G P+
Sbjct: 222 IAYRKFTSA-SDVWSYGIVLWEVMSYGERPY 251
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 92/212 (43%), Gaps = 28/212 (13%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE------RGQKIDEHVQREIMNHRSLK 56
RYE V +IG G +G RD + +A+K + G + RE+ R L+
Sbjct: 10 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLE 69
Query: 57 ---HPNIVRFKEVLLTP-THLAIVMEYAAGGELFERICNAGRFSEDEA----------RF 102
HPN+VR +V T T I + +FE + R D+A +
Sbjct: 70 AFEHPNVVRLMDVCATSRTDREIKVTL-----VFEHVDQDLRTYLDKAPPPGLPAETIKD 124
Query: 103 FFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGT 162
+Q + G+ + H+ I HRDLK EN L+ ++ VK+ DFG ++ V T
Sbjct: 125 LMRQFLRGLDFLHANCIVHRDLKPENILV--TSGGTVKLADFGLARIYSYQMALTPVVVT 182
Query: 163 PAYIAPEVLTKKEYDGKIADVWSCGVTLYVML 194
Y APEVL + Y + D+WS G M
Sbjct: 183 LWYRAPEVLLQSTYATPV-DMWSVGCIFAEMF 213
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 101/214 (47%), Gaps = 24/214 (11%)
Query: 3 RYEIVKDIGSGNFG--VAKLVRDKWTREL-LAVKFIERGQKIDEHVQREIMNHRSL---- 55
R I K IGSG+ G +R R++ +A+K ++ G E +R+ ++ S+
Sbjct: 50 RIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT--ERQRRDFLSEASIMGQF 107
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGEL--FERICNAGRFSEDEARFFFQQLISGVSY 113
HPNI+R + V+ IV EY G L F R + G+F+ + + + +G+ Y
Sbjct: 108 DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLR-THDGQFTIMQLVGMLRGVGAGMRY 166
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA------YIA 167
+ HRDL N L+D + K+ DFG S+ VL P + T + A
Sbjct: 167 LSDLGYVHRDLAARNVLVDSNLV--CKVSDFGLSR--VLEDDPDAAXTTTGGKIPIRWTA 222
Query: 168 PEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
PE + + + +DVWS GV ++ V+ G P+
Sbjct: 223 PEAIAFRTFS-SASDVWSFGVVMWEVLAYGERPY 255
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 131/304 (43%), Gaps = 57/304 (18%)
Query: 4 YEIVKDIGSGNFG-VAKLVRDKWTRELLAVKFIE----RGQKIDEHVQREI--MNHRSLK 56
Y I+K IGSG V +++ +K +++ A+K++ Q +D + + EI +N
Sbjct: 30 YSILKQIGSGGSSKVFQVLNEK--KQIYAIKYVNLEEADNQTLDSY-RNEIAYLNKLQQH 86
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
I+R + +T ++ +VME +L + E + +++ ++ V H
Sbjct: 87 SDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 145
Query: 117 MQICHRDLKLENTLL-DGSTAPRVKICDFGYSKSSVLHSQPK-------STVGTPAYIAP 168
I H DLK N L+ DG +K+ DFG + QP S VGT Y+ P
Sbjct: 146 HGIVHSDLKPANFLIVDG----MLKLIDFGIAN----QMQPDXXXVVKDSQVGTVNYMPP 197
Query: 169 EV---LTKKEYDGKIA-------DVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILS 218
E ++ +GK DVWS G LY M G PF+ + I +I
Sbjct: 198 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ---------QIINQISK 248
Query: 219 VH--------YSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWF-LRNLPIELT 269
+H FPD L+ +L + ++RI+IPE+ HP+ ++ P+
Sbjct: 249 LHAIIDPNHEIEFPDIPEKDLQ--DVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQM 306
Query: 270 EGGS 273
G+
Sbjct: 307 AKGT 310
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 101/214 (47%), Gaps = 24/214 (11%)
Query: 3 RYEIVKDIGSGNFG--VAKLVRDKWTREL-LAVKFIERGQKIDEHVQREIMNHRSL---- 55
R I K IGSG+ G +R R++ +A+K ++ G E +R+ ++ S+
Sbjct: 50 RIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT--ERQRRDFLSEASIMGQF 107
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGEL--FERICNAGRFSEDEARFFFQQLISGVSY 113
HPNI+R + V+ IV EY G L F R + G+F+ + + + +G+ Y
Sbjct: 108 DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLR-THDGQFTIMQLVGMLRGVGAGMRY 166
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA------YIA 167
+ HRDL N L+D + K+ DFG S+ VL P + T + A
Sbjct: 167 LSDLGYVHRDLAARNVLVDSNLV--CKVSDFGLSR--VLEDDPDAAYTTTGGKIPIRWTA 222
Query: 168 PEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
PE + + + +DVWS GV ++ V+ G P+
Sbjct: 223 PEAIAFRTFS-SASDVWSFGVVMWEVLAYGERPY 255
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 101/211 (47%), Gaps = 24/211 (11%)
Query: 6 IVKDIGSGNFGVAKLVRDKW--TREL-LAVKFIERGQKIDEHVQREIMNHRSL----KHP 58
I K +G+G FG R K +E+ +A+K ++ G E +R+ + S+ HP
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT--EKQRRDFLGEASIMGQFDHP 106
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGEL--FERICNAGRFSEDEARFFFQQLISGVSYCHS 116
NI+R + V+ + IV EY G L F R +A +F+ + + + SG+ Y
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA-QFTVIQLVGMLRGIASGMKYLSD 165
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA------YIAPEV 170
M HRDL N L++ + K+ DFG + VL P++ T + +PE
Sbjct: 166 MGYVHRDLAARNILINSNLV--CKVSDFGLGR--VLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 171 LTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
+ +++ +DVWS G+ L+ VM G P+
Sbjct: 222 IAYRKFTSA-SDVWSYGIVLWEVMSYGERPY 251
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 101/230 (43%), Gaps = 41/230 (17%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIER--GQKID-EHVQREIMNHRSLKHP 58
+RYEI IG+G++G DK + ++A+K I R ID + + REI L H
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHD 112
Query: 59 NIVRFKEVLLTPT-----HLAIVMEYAAGGELFERICNAGRF-SEDEARFFFQQLISGVS 112
++V+ ++++ L +V+E A F+++ + +E + L+ GV
Sbjct: 113 HVVKVLDIVIPKDVEKFDELYVVLEIADSD--FKKLFRTPVYLTELHIKTLLYNLLVGVK 170
Query: 113 YCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSK------------------------ 148
Y HS I HRDLK N L++ + VK+CDFG ++
Sbjct: 171 YVHSAGILHRDLKPANCLVNQDCS--VKVCDFGLARTVDYPENGNSQLPISPREDDMNLV 228
Query: 149 ----SSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKIADVWSCGVTLYVML 194
+ L Q V T Y APE++ +E + DVWS G +L
Sbjct: 229 TFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 19/31 (61%)
Query: 230 SLECKHLLSRIFVANSEKRITIPEIKNHPWF 260
S + HLL R+ V N KRITI E HP+F
Sbjct: 370 SADAIHLLKRMLVFNPNKRITINECLAHPFF 400
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 100/210 (47%), Gaps = 22/210 (10%)
Query: 6 IVKDIGSGNFGVAKLVRDKW--TREL-LAVKFIERGQKIDEHVQREIMNHRSL----KHP 58
I + IG+G FG R K REL +A+K ++ G E +R+ + S+ HP
Sbjct: 26 IERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYT--EKQRRDFLGEASIMGQFDHP 83
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGELFERIC-NAGRFSEDEARFFFQQLISGVSYCHSM 117
NI+ + V+ + IV EY G L + N G+F+ + + + +G+ Y M
Sbjct: 84 NIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDM 143
Query: 118 QICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA------YIAPEVL 171
HRDL N L++ + K+ DFG S+ VL P++ T + APE +
Sbjct: 144 GYVHRDLAARNILINSNLV--CKVSDFGLSR--VLEDDPEAAYTTRGGKIPIRWTAPEAI 199
Query: 172 TKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
+++ +DVWS G+ ++ V+ G P+
Sbjct: 200 AFRKFTSA-SDVWSYGIVMWEVVSYGERPY 228
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 94/227 (41%), Gaps = 37/227 (16%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIER--GQKID-EHVQREIMNHRSLKHP 58
+ YEI IG G++G L DK + +A+K + R ID + + REI LK
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 87
Query: 59 NIVRFKEV-----LLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSY 113
I+R ++ LL L IV+E A +L + +E + L+ G +
Sbjct: 88 YIIRLHDLIIPEDLLKFDELYIVLE-IADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKF 146
Query: 114 CHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS------------------------ 149
H I HRDLK N LL+ + VKICDFG +++
Sbjct: 147 IHESGIIHRDLKPANCLLNQDCS--VKICDFGLARTINSDKDIHIVNDLEEKEENEEPGP 204
Query: 150 --SVLHSQPKSTVGTPAYIAPEVLTKKEYDGKIADVWSCGVTLYVML 194
L Q S V T Y APE++ +E D+WS G +L
Sbjct: 205 HNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELL 251
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 131/304 (43%), Gaps = 57/304 (18%)
Query: 4 YEIVKDIGSGNFG-VAKLVRDKWTRELLAVKFIE----RGQKIDEHVQREI--MNHRSLK 56
Y I+K IGSG V +++ +K +++ A+K++ Q +D + + EI +N
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEK--KQIYAIKYVNLEEADNQTLDSY-RNEIAYLNKLQQH 114
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
I+R + +T ++ +VME +L + E + +++ ++ V H
Sbjct: 115 SDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 173
Query: 117 MQICHRDLKLENTLL-DGSTAPRVKICDFGYSKSSVLHSQPKST-------VGTPAYIAP 168
I H DLK N L+ DG +K+ DFG + QP +T VG Y+ P
Sbjct: 174 HGIVHSDLKPANFLIVDG----MLKLIDFGIAN----QMQPDTTSVVKDSQVGAVNYMPP 225
Query: 169 EV---LTKKEYDGKIA-------DVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILS 218
E ++ +GK DVWS G LY M G PF+ + I +I
Sbjct: 226 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ---------QIINQISK 276
Query: 219 VH--------YSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWF-LRNLPIELT 269
+H FPD L+ +L + ++RI+IPE+ HP+ ++ P+
Sbjct: 277 LHAIIDPNHEIEFPDIPEKDLQ--DVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQM 334
Query: 270 EGGS 273
G+
Sbjct: 335 AKGT 338
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 100/237 (42%), Gaps = 38/237 (16%)
Query: 58 PNIVRFKEVLLTPTHL--AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCH 115
PNI+ +++ P A+V E+ + F+++ ++ + RF+ +++ + YCH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKALDYCH 148
Query: 116 SMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKE 175
SM I HRD+K N L+D ++++ D+G ++ + V + + PE+L +
Sbjct: 149 SMGIMHRDVKPHNVLIDHEHR-KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 176 YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVH--YSFPDYVRVSL-- 231
D+WS G L M+ PF D + I ++L Y + D + L
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 267
Query: 232 --------------------ECKHLLS--------RIFVANSEKRITIPEIKNHPWF 260
E +HL+S ++ + + R+T E HP+F
Sbjct: 268 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 101/211 (47%), Gaps = 24/211 (11%)
Query: 6 IVKDIGSGNFGVAKLVRDKW--TREL-LAVKFIERGQKIDEHVQREIMNHRSL----KHP 58
I K +G+G FG R K +E+ +A+K ++ G E +R+ + S+ HP
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT--EKQRRDFLGEASIMGQFDHP 106
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGEL--FERICNAGRFSEDEARFFFQQLISGVSYCHS 116
NI+R + V+ + IV E G L F R +A +F+ + + + SG+ Y
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA-QFTVIQLVGMLRGIASGMKYLSD 165
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA------YIAPEV 170
M HRDL N L++ + K+ DFG S+ VL P++ T + +PE
Sbjct: 166 MGAVHRDLAARNILINSNLV--CKVSDFGLSR--VLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 171 LTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
+ +++ +DVWS G+ L+ VM G P+
Sbjct: 222 IAYRKFTSA-SDVWSYGIVLWEVMSYGERPY 251
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 101/211 (47%), Gaps = 24/211 (11%)
Query: 6 IVKDIGSGNFGVAKLVRDKW--TREL-LAVKFIERGQKIDEHVQREIMNHRSL----KHP 58
I K +G+G FG R K +E+ +A+K ++ G E +R+ + S+ HP
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT--EKQRRDFLGEASIMGQFDHP 106
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGEL--FERICNAGRFSEDEARFFFQQLISGVSYCHS 116
NI+R + V+ + IV E G L F R +A +F+ + + + SG+ Y
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA-QFTVIQLVGMLRGIASGMKYLSD 165
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA------YIAPEV 170
M HRDL N L++ + K+ DFG S+ VL P++ T + +PE
Sbjct: 166 MGYVHRDLAARNILINSNLV--CKVSDFGLSR--VLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 171 LTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
+ +++ +DVWS G+ L+ VM G P+
Sbjct: 222 IAYRKFTSA-SDVWSYGIVLWEVMSYGERPY 251
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 117/290 (40%), Gaps = 58/290 (20%)
Query: 31 AVKFIERGQKIDEHVQREIMNHRSLKHPNIVRFKEVLLTPT--HLAIVMEYAAGGEL--- 85
A+K IE G I REI R LKHPN++ ++V L+ + ++ +YA
Sbjct: 52 ALKQIE-GTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHII 110
Query: 86 -FERICNAGR----FSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLL--DGSTAPR 138
F R A + + Q++ G+ Y H+ + HRDLK N L+ +G R
Sbjct: 111 KFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGR 170
Query: 139 VKICDFGYSKSSVLHSQPKS----TVGTPAYIAPEVLTKKEYDGKIADVWSCGVTLYVML 194
VKI D G+++ +P + V T Y APE+L + K D+W+ G +L
Sbjct: 171 VKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELL 230
Query: 195 -----------------------------VGAYP----FED----PEDP---KNFRK-TI 213
V +P +ED PE K+FR+ T
Sbjct: 231 TSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTY 290
Query: 214 GRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNHPWFLRN 263
+ Y V+ + HLL ++ + KRIT + P+FL +
Sbjct: 291 TNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLED 340
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 26/216 (12%)
Query: 5 EIVKDIGSGNFG--VAKLVRDKWTREL-LAVKFIERGQKIDEHVQREIMNHRSL----KH 57
+I + IG+G FG + ++ RE+ +A+K ++ G E +R+ ++ S+ H
Sbjct: 36 KIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYT--EKQRRDFLSEASIMGQFDH 93
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGEL--FERICNAGRFSEDEARFFFQQLISGVSYCH 115
PN++ + V+ T + I+ E+ G L F R N G+F+ + + + +G+ Y
Sbjct: 94 PNVIHLEGVVTKSTPVMIITEFMENGSLDSFLR-QNDGQFTVIQLVGMLRGIAAGMKYLA 152
Query: 116 SMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA--------YIA 167
M HRDL N L++ + K+ DFG S+ L T A + A
Sbjct: 153 DMNYVHRDLAARNILVNSNLV--CKVSDFGLSR--FLEDDTSDPTYTSALGGKIPIRWTA 208
Query: 168 PEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPFED 202
PE + +++ +DVWS G+ ++ VM G P+ D
Sbjct: 209 PEAIQYRKFTSA-SDVWSYGIVMWEVMSYGERPYWD 243
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 100/237 (42%), Gaps = 38/237 (16%)
Query: 58 PNIVRFKEVLLTPTHL--AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCH 115
PNI+ +++ P A+V E+ + F+++ ++ + RF+ +++ + YCH
Sbjct: 97 PNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKALDYCH 153
Query: 116 SMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKE 175
SM I HRD+K N ++D ++++ D+G ++ + V + + PE+L +
Sbjct: 154 SMGIMHRDVKPHNVMIDHEHR-KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 212
Query: 176 YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVH--YSFPDYVRVSL-- 231
D+WS G L M+ PF D + I ++L Y + D + L
Sbjct: 213 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 272
Query: 232 --------------------ECKHLLS--------RIFVANSEKRITIPEIKNHPWF 260
E +HL+S ++ + + R+T E HP+F
Sbjct: 273 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 329
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 101/211 (47%), Gaps = 24/211 (11%)
Query: 6 IVKDIGSGNFGVAKLVRDKW--TREL-LAVKFIERGQKIDEHVQREIMNHRSL----KHP 58
I K +G+G FG R K +E+ +A+K ++ G E +R+ + S+ HP
Sbjct: 20 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT--EKQRRDFLGEASIMGQFDHP 77
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGEL--FERICNAGRFSEDEARFFFQQLISGVSYCHS 116
NI+R + V+ + IV E G L F R +A +F+ + + + SG+ Y
Sbjct: 78 NIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA-QFTVIQLVGMLRGIASGMKYLSD 136
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA------YIAPEV 170
M HRDL N L++ + K+ DFG S+ VL P++ T + +PE
Sbjct: 137 MGYVHRDLAARNILINSNLV--CKVSDFGLSR--VLEDDPEAAYTTRGGKIPIRWTSPEA 192
Query: 171 LTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
+ +++ +DVWS G+ L+ VM G P+
Sbjct: 193 IAYRKFTSA-SDVWSYGIVLWEVMSYGERPY 222
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 100/237 (42%), Gaps = 38/237 (16%)
Query: 58 PNIVRFKEVLLTPTHL--AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCH 115
PNI+ +++ P A+V E+ + F+++ ++ + RF+ +++ + YCH
Sbjct: 91 PNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKALDYCH 147
Query: 116 SMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKE 175
SM I HRD+K N ++D ++++ D+G ++ + V + + PE+L +
Sbjct: 148 SMGIMHRDVKPHNVMIDHEHR-KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 206
Query: 176 YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVH--YSFPDYVRVSL-- 231
D+WS G L M+ PF D + I ++L Y + D + L
Sbjct: 207 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 266
Query: 232 --------------------ECKHLLS--------RIFVANSEKRITIPEIKNHPWF 260
E +HL+S ++ + + R+T E HP+F
Sbjct: 267 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 323
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 100/237 (42%), Gaps = 38/237 (16%)
Query: 58 PNIVRFKEVLLTPTHL--AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCH 115
PNI+ +++ P A+V E+ + F+++ ++ + RF+ +++ + YCH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKALDYCH 148
Query: 116 SMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKE 175
SM I HRD+K N ++D ++++ D+G ++ + V + + PE+L +
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHR-KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 176 YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVH--YSFPDYVRVSL-- 231
D+WS G L M+ PF D + I ++L Y + D + L
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 267
Query: 232 --------------------ECKHLLS--------RIFVANSEKRITIPEIKNHPWF 260
E +HL+S ++ + + R+T E HP+F
Sbjct: 268 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 94/217 (43%), Gaps = 22/217 (10%)
Query: 1 MERYEIV--KDIGSGNFGVAKLVRDKWTRELL--AVKFIERGQKIDEHVQREIMNHRSLK 56
MER +I +G G FG ++ W + L AVK ++ E +E + +K
Sbjct: 8 MERTDITMKHKLGGGQFG--EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK 65
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFE--RICNAGRFSEDEARFFFQQLISGVSYC 114
HPN+V+ V I+ E+ G L + R CN S + Q+ S + Y
Sbjct: 66 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSK-----SSVLHSQPKSTVGTPAYIAPE 169
HRDL N L+ + VK+ DFG S+ + H+ K + + APE
Sbjct: 126 EKKNFIHRDLAARNCLVGENHL--VKVADFGLSRLMTGDTXTAHAGAKFPI---KWTAPE 180
Query: 170 VLTKKEYDGKIADVWSCGVTLYVML---VGAYPFEDP 203
L ++ K +DVW+ GV L+ + + YP DP
Sbjct: 181 SLAYNKFSIK-SDVWAFGVLLWEIATYGMSPYPGIDP 216
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 100/237 (42%), Gaps = 38/237 (16%)
Query: 58 PNIVRFKEVLLTPTHL--AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCH 115
PNI+ +++ P A+V E+ + F+++ ++ + RF+ +++ + YCH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKALDYCH 148
Query: 116 SMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKE 175
SM I HRD+K N ++D ++++ D+G ++ + V + + PE+L +
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHR-KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 176 YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVH--YSFPDYVRVSL-- 231
D+WS G L M+ PF D + I ++L Y + D + L
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 267
Query: 232 --------------------ECKHLLS--------RIFVANSEKRITIPEIKNHPWF 260
E +HL+S ++ + + R+T E HP+F
Sbjct: 268 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 100/237 (42%), Gaps = 38/237 (16%)
Query: 58 PNIVRFKEVLLTPTHL--AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCH 115
PNI+ +++ P A+V E+ + F+++ ++ + RF+ +++ + YCH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKALDYCH 148
Query: 116 SMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKE 175
SM I HRD+K N ++D ++++ D+G ++ + V + + PE+L +
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHR-KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 176 YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVH--YSFPDYVRVSL-- 231
D+WS G L M+ PF D + I ++L Y + D + L
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 267
Query: 232 --------------------ECKHLLS--------RIFVANSEKRITIPEIKNHPWF 260
E +HL+S ++ + + R+T E HP+F
Sbjct: 268 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 100/237 (42%), Gaps = 38/237 (16%)
Query: 58 PNIVRFKEVLLTPTHL--AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCH 115
PNI+ +++ P A+V E+ + F+++ ++ + RF+ +++ + YCH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKALDYCH 148
Query: 116 SMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKE 175
SM I HRD+K N ++D ++++ D+G ++ + V + + PE+L +
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHR-KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 176 YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVH--YSFPDYVRVSL-- 231
D+WS G L M+ PF D + I ++L Y + D + L
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 267
Query: 232 --------------------ECKHLLS--------RIFVANSEKRITIPEIKNHPWF 260
E +HL+S ++ + + R+T E HP+F
Sbjct: 268 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 100/237 (42%), Gaps = 38/237 (16%)
Query: 58 PNIVRFKEVLLTPTHL--AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCH 115
PNI+ +++ P A+V E+ + F+++ ++ + RF+ +++ + YCH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKALDYCH 148
Query: 116 SMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKE 175
SM I HRD+K N ++D ++++ D+G ++ + V + + PE+L +
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHR-KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 176 YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVH--YSFPDYVRVSL-- 231
D+WS G L M+ PF D + I ++L Y + D + L
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 267
Query: 232 --------------------ECKHLLS--------RIFVANSEKRITIPEIKNHPWF 260
E +HL+S ++ + + R+T E HP+F
Sbjct: 268 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 100/237 (42%), Gaps = 38/237 (16%)
Query: 58 PNIVRFKEVLLTPTHL--AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCH 115
PNI+ +++ P A+V E+ + F+++ ++ + RF+ +++ + YCH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKALDYCH 148
Query: 116 SMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKE 175
SM I HRD+K N ++D ++++ D+G ++ + V + + PE+L +
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHR-KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 176 YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVH--YSFPDYVRVSL-- 231
D+WS G L M+ PF D + I ++L Y + D + L
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 267
Query: 232 --------------------ECKHLLS--------RIFVANSEKRITIPEIKNHPWF 260
E +HL+S ++ + + R+T E HP+F
Sbjct: 268 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 100/237 (42%), Gaps = 38/237 (16%)
Query: 58 PNIVRFKEVLLTPTHL--AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCH 115
PNI+ +++ P A+V E+ + F+++ ++ + RF+ +++ + YCH
Sbjct: 91 PNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKALDYCH 147
Query: 116 SMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKE 175
SM I HRD+K N ++D ++++ D+G ++ + V + + PE+L +
Sbjct: 148 SMGIMHRDVKPHNVMIDHEHR-KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 206
Query: 176 YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVH--YSFPDYVRVSL-- 231
D+WS G L M+ PF D + I ++L Y + D + L
Sbjct: 207 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 266
Query: 232 --------------------ECKHLLS--------RIFVANSEKRITIPEIKNHPWF 260
E +HL+S ++ + + R+T E HP+F
Sbjct: 267 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 323
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 100/237 (42%), Gaps = 38/237 (16%)
Query: 58 PNIVRFKEVLLTPTHL--AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCH 115
PNI+ +++ P A+V E+ + F+++ ++ + RF+ +++ + YCH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKALDYCH 148
Query: 116 SMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKE 175
SM I HRD+K N ++D ++++ D+G ++ + V + + PE+L +
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHR-KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 176 YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVH--YSFPDYVRVSL-- 231
D+WS G L M+ PF D + I ++L Y + D + L
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 267
Query: 232 --------------------ECKHLLS--------RIFVANSEKRITIPEIKNHPWF 260
E +HL+S ++ + + R+T E HP+F
Sbjct: 268 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 100/237 (42%), Gaps = 38/237 (16%)
Query: 58 PNIVRFKEVLLTPTHL--AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCH 115
PNI+ +++ P A+V E+ + F+++ ++ + RF+ +++ + YCH
Sbjct: 90 PNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKALDYCH 146
Query: 116 SMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKE 175
SM I HRD+K N ++D ++++ D+G ++ + V + + PE+L +
Sbjct: 147 SMGIMHRDVKPHNVMIDHEHR-KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 205
Query: 176 YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVH--YSFPDYVRVSL-- 231
D+WS G L M+ PF D + I ++L Y + D + L
Sbjct: 206 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 265
Query: 232 --------------------ECKHLLS--------RIFVANSEKRITIPEIKNHPWF 260
E +HL+S ++ + + R+T E HP+F
Sbjct: 266 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 322
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 100/237 (42%), Gaps = 38/237 (16%)
Query: 58 PNIVRFKEVLLTPTHL--AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCH 115
PNI+ +++ P A+V E+ + F+++ ++ + RF+ +++ + YCH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLRQT--LTDYDIRFYMYEILKALDYCH 148
Query: 116 SMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKE 175
SM I HRD+K N ++D ++++ D+G ++ + V + + PE+L +
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHR-KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 176 YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVH--YSFPDYVRVSL-- 231
D+WS G L M+ PF D + I ++L Y + D + L
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 267
Query: 232 --------------------ECKHLLS--------RIFVANSEKRITIPEIKNHPWF 260
E +HL+S ++ + + R+T E HP+F
Sbjct: 268 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 100/237 (42%), Gaps = 38/237 (16%)
Query: 58 PNIVRFKEVLLTPTHL--AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCH 115
PNI+ +++ P A+V E+ + F+++ ++ + RF+ +++ + YCH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKALDYCH 148
Query: 116 SMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKE 175
SM I HRD+K N ++D ++++ D+G ++ + V + + PE+L +
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHR-KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 176 YDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVH--YSFPDYVRVSL-- 231
D+WS G L M+ PF D + I ++L Y + D + L
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 267
Query: 232 --------------------ECKHLLS--------RIFVANSEKRITIPEIKNHPWF 260
E +HL+S ++ + + R+T E HP+F
Sbjct: 268 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 95/217 (43%), Gaps = 22/217 (10%)
Query: 1 MERYEIV--KDIGSGNFGVAKLVRDKWTRELL--AVKFIERGQKIDEHVQREIMNHRSLK 56
MER +I +G G +G ++ W + L AVK ++ E +E + +K
Sbjct: 8 MERTDITMKHKLGGGQYG--EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK 65
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFE--RICNAGRFSEDEARFFFQQLISGVSYC 114
HPN+V+ V I++E+ G L + R CN S + Q+ S + Y
Sbjct: 66 HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSK-----SSVLHSQPKSTVGTPAYIAPE 169
HRDL N L+ + VK+ DFG S+ + H+ K + + APE
Sbjct: 126 EKKNFIHRDLAARNCLVGENHL--VKVADFGLSRLMTGDTXTAHAGAKFPI---KWTAPE 180
Query: 170 VLTKKEYDGKIADVWSCGVTLYVML---VGAYPFEDP 203
L ++ K +DVW+ GV L+ + + YP DP
Sbjct: 181 SLAYNKFSIK-SDVWAFGVLLWEIATYGMSPYPGIDP 216
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 128/323 (39%), Gaps = 70/323 (21%)
Query: 3 RYEIVKDIGSGNFG-VAKLVRDKWTRELLAVKFIERGQKIDEHVQREI--MNHRSLKHPN 59
RYEIV +G G FG V + + K +AVK ++ + E + EI + H + PN
Sbjct: 15 RYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPN 74
Query: 60 ----IVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGR--FSEDEARFFFQQLISGVSY 113
V+ E H+ IV E G ++ I G F D R Q+ V++
Sbjct: 75 STFRCVQMLEWFEHHGHICIVFE-LLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNF 133
Query: 114 CHSMQICHRDLKLENTLL---DGSTA--------------PRVKICDFGYSKSSVLHSQP 156
HS ++ H DLK EN L D + A P +K+ DFG S+ +
Sbjct: 134 LHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFG---SATYDDEH 190
Query: 157 KST-VGTPAYIAPEVLTKKEYDGKIADVWSCGVTL--YVMLVGAYPFEDPED-------- 205
ST V T Y APEV+ + + DVWS G L Y + +P D ++
Sbjct: 191 HSTLVSTRHYRAPEVILALGW-SQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERI 249
Query: 206 ----PKNFRKTIGRILSVHYSFPDYVR-------VSLECK-----------------HLL 237
PK+ + + H+ D+ VS CK L+
Sbjct: 250 LGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLI 309
Query: 238 SRIFVANSEKRITIPEIKNHPWF 260
++ + KRIT+ E HP+F
Sbjct: 310 QKMLEYDPAKRITLREALKHPFF 332
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 94/224 (41%), Gaps = 24/224 (10%)
Query: 8 KDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQ--REIMNHRSLKHPNIVRFKE 65
+ IG GNFG R + L+AVK D + +E + HPNIVR
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 66 VLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLI-------SGVSYCHSMQ 118
V + IVME GG+ + G AR + L+ +G+ Y S
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTEG------ARLRVKTLLQMVGDAAAGMEYLESKC 233
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSV--LHSQPKSTVGTPA-YIAPEVLTKKE 175
HRDL N L+ +KI DFG S+ +++ P + APE L
Sbjct: 234 CIHRDLAARNCLVTEKNV--LKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGR 291
Query: 176 YDGKIADVWSCGVTLY-VMLVGAYPFED--PEDPKNFRKTIGRI 216
Y + +DVWS G+ L+ +GA P+ + + + F + GR+
Sbjct: 292 YSSE-SDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRL 334
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 99/211 (46%), Gaps = 18/211 (8%)
Query: 9 DIGSGNFGVAK--LVRDKWTRELLAVKFIERG-QKID-EHVQREIMNHRSLKHPNIVRFK 64
++G GNFG + + R + + +A+K +++G +K D E + RE L +P IVR
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 65 EVLLTPTHLAIVMEYAAGGELFERICNAGRFSE---DEARFFFQQLISGVSYCHSMQICH 121
V L +VME A GG L + + G+ E Q+ G+ Y H
Sbjct: 77 GVCQAEA-LMLVMEMAGGGPLHKFL--VGKREEIPVSNVAELLHQVSMGMKYLEEKNFVH 133
Query: 122 RDLKLENTLLDGSTAPRVKICDFGYSKS---SVLHSQPKSTVGTP-AYIAPEVLTKKEYD 177
RDL N LL KI DFG SK+ + +S P + APE + +++
Sbjct: 134 RDLAARNVLL--VNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFS 191
Query: 178 GKIADVWSCGVTLYVML-VGAYPFEDPEDPK 207
+ +DVWS GVT++ L G P++ + P+
Sbjct: 192 SR-SDVWSYGVTMWEALSYGQKPYKKMKGPE 221
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 91/209 (43%), Gaps = 14/209 (6%)
Query: 1 MERYEIVKD--IGSGNFGVAKLVRDKWTRELL--AVKFIERGQKIDEHVQREIMNHRSLK 56
MER +I +G G +G ++ W + L AVK ++ E +E + +K
Sbjct: 11 MERTDITMKHKLGGGQYG--EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK 68
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFE--RICNAGRFSEDEARFFFQQLISGVSYC 114
HPN+V+ V I+ E+ G L + R CN + + Q+ S + Y
Sbjct: 69 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 128
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSK--SSVLHSQPKSTVGTPAYIAPEVLT 172
HRDL N L+ + VK+ DFG S+ + ++ P + APE L
Sbjct: 129 EKKNFIHRDLAARNCLVGENHL--VKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLA 186
Query: 173 KKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
++ K +DVW+ GV L+ + G P+
Sbjct: 187 YNKFSIK-SDVWAFGVLLWEIATYGMSPY 214
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 91/209 (43%), Gaps = 14/209 (6%)
Query: 1 MERYEIV--KDIGSGNFGVAKLVRDKWTRELL--AVKFIERGQKIDEHVQREIMNHRSLK 56
MER +I +G G +G ++ W + L AVK ++ E +E + +K
Sbjct: 12 MERTDITMKHKLGGGQYG--EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK 69
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFE--RICNAGRFSEDEARFFFQQLISGVSYC 114
HPN+V+ V I+ E+ G L + R CN + + Q+ S + Y
Sbjct: 70 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 129
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSK--SSVLHSQPKSTVGTPAYIAPEVLT 172
HRDL N L+ + VK+ DFG S+ + ++ P + APE L
Sbjct: 130 EKKNFIHRDLAARNCLVGENHL--VKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLA 187
Query: 173 KKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
++ K +DVW+ GV L+ + G P+
Sbjct: 188 YNKFSIK-SDVWAFGVLLWEIATYGMSPY 215
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 43/232 (18%)
Query: 54 SLKHPNIVRF--KEVLLTPTHLAIVMEYAAGGELFER--ICNAGRFSEDEARFFFQQLIS 109
S +HPN++R+ E ++AI + A E E+ + G E QQ S
Sbjct: 74 SDEHPNVIRYFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGL----EPITLLQQTTS 129
Query: 110 GVSYCHSMQICHRDLKLENTLLDGSTAP---RVKICDFGYSKSSVL----HSQPKSTVGT 162
G+++ HS+ I HRDLK N L+ A + I DFG K + S+ GT
Sbjct: 130 GLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGT 189
Query: 163 PAYIAPEVLTK--KEYDGKIADVWSCG-VTLYVMLVGAYPFEDPEDPKNFRKTIGRILSV 219
+IAPE+L++ KE D++S G V YV+ G++PF K+ ++ +L
Sbjct: 190 EGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPF-----GKSLQRQANILLGA 244
Query: 220 HYSFPDYVRVSLECKH-----------LLSRIFVANSEKRITIPEIKNHPWF 260
SL+C H L+ ++ + +KR + + HP+F
Sbjct: 245 ---------CSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFF 287
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 103/214 (48%), Gaps = 24/214 (11%)
Query: 5 EIVKDIGSGNFGVAKLVRDKW--TREL-LAVKFIERG----QKIDEHVQREIMNHRSLKH 57
+I + IG+G FG R K R++ +A+K ++ G Q+ D + IM H
Sbjct: 46 KIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQ--FDH 103
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGEL--FERICNAGRFSEDEARFFFQQLISGVSYCH 115
PN+V + V+ + IV+E+ G L F R + G+F+ + + + +G+ Y
Sbjct: 104 PNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRK-HDGQFTVIQLVGMLRGIAAGMRYLA 162
Query: 116 SMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA------YIAPE 169
M HRDL N L++ + K+ DFG S+ V+ P++ T + APE
Sbjct: 163 DMGYVHRDLAARNILVNSNLV--CKVSDFGLSR--VIEDDPEAVYTTTGGKIPVRWTAPE 218
Query: 170 VLTKKEYDGKIADVWSCGVTLY-VMLVGAYPFED 202
+ +++ +DVWS G+ ++ VM G P+ D
Sbjct: 219 AIQYRKFTSA-SDVWSYGIVMWEVMSYGERPYWD 251
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 93/212 (43%), Gaps = 20/212 (9%)
Query: 1 MERYEIV--KDIGSGNFGVAKLVRDKWTRELL--AVKFIERGQKIDEHVQREIMNHRSLK 56
MER +I +G G +G ++ W + L AVK ++ E +E + +K
Sbjct: 10 MERTDITMKHKLGGGQYG--EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK 67
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFE--RICNAGRFSEDEARFFFQQLISGVSYC 114
HPN+V+ V I++E+ G L + R CN S + Q+ S + Y
Sbjct: 68 HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSK-----SSVLHSQPKSTVGTPAYIAPE 169
HRDL N L+ + VK+ DFG S+ + H+ K + + APE
Sbjct: 128 EKKNFIHRDLAARNCLVGENHL--VKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPE 182
Query: 170 VLTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
L ++ K +DVW+ GV L+ + G P+
Sbjct: 183 SLAYNKFSIK-SDVWAFGVLLWEIATYGMSPY 213
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 93/212 (43%), Gaps = 20/212 (9%)
Query: 1 MERYEIV--KDIGSGNFGVAKLVRDKWTRELL--AVKFIERGQKIDEHVQREIMNHRSLK 56
MER +I +G G +G ++ W + L AVK ++ E +E + +K
Sbjct: 10 MERTDITMKHKLGGGQYG--EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK 67
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFE--RICNAGRFSEDEARFFFQQLISGVSYC 114
HPN+V+ V I++E+ G L + R CN S + Q+ S + Y
Sbjct: 68 HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSK-----SSVLHSQPKSTVGTPAYIAPE 169
HRDL N L+ + VK+ DFG S+ + H+ K + + APE
Sbjct: 128 EKKNFIHRDLAARNCLVGENHL--VKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPE 182
Query: 170 VLTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
L ++ K +DVW+ GV L+ + G P+
Sbjct: 183 SLAYNKFSIK-SDVWAFGVLLWEIATYGMSPY 213
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 93/224 (41%), Gaps = 24/224 (10%)
Query: 8 KDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQ--REIMNHRSLKHPNIVRFKE 65
+ IG GNFG R + L+AVK D + +E + HPNIVR
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 66 VLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLI-------SGVSYCHSMQ 118
V + IVME GG+ + G AR + L+ +G+ Y S
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTEG------ARLRVKTLLQMVGDAAAGMEYLESKC 233
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSV--LHSQPKSTVGTPA-YIAPEVLTKKE 175
HRDL N L+ +KI DFG S+ + + P + APE L
Sbjct: 234 CIHRDLAARNCLVTEKNV--LKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGR 291
Query: 176 YDGKIADVWSCGVTLY-VMLVGAYPFED--PEDPKNFRKTIGRI 216
Y + +DVWS G+ L+ +GA P+ + + + F + GR+
Sbjct: 292 YSSE-SDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRL 334
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 89/210 (42%), Gaps = 16/210 (7%)
Query: 1 MERYEIV--KDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHP 58
MER +I +G G +G + K +AVK ++ E +E + +KHP
Sbjct: 29 MERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHP 88
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGELFE--RICNAGRFSEDEARFFFQQLISGVSYCHS 116
N+V+ V IV EY G L + R CN + + Q+ S + Y
Sbjct: 89 NLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEK 148
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSK-----SSVLHSQPKSTVGTPAYIAPEVL 171
HRDL N L+ + VK+ DFG S+ + H+ K + + APE L
Sbjct: 149 KNFIHRDLAARNCLVGENHV--VKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPESL 203
Query: 172 TKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
+ K +DVW+ GV L+ + G P+
Sbjct: 204 AYNTFSIK-SDVWAFGVLLWEIATYGMSPY 232
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 94/217 (43%), Gaps = 22/217 (10%)
Query: 1 MERYEIV--KDIGSGNFGVAKLVRDKWTRELL--AVKFIERGQKIDEHVQREIMNHRSLK 56
MER +I +G G +G ++ W + L AVK ++ E +E + +K
Sbjct: 8 MERTDITMKHKLGGGQYG--EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK 65
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFE--RICNAGRFSEDEARFFFQQLISGVSYC 114
HPN+V+ V I+ E+ G L + R CN S + Q+ S + Y
Sbjct: 66 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSK-----SSVLHSQPKSTVGTPAYIAPE 169
HRDL N L+ + VK+ DFG S+ + H+ K + + APE
Sbjct: 126 EKKNFIHRDLAARNCLVGENHL--VKVADFGLSRLMTGDTFTAHAGAKFPI---KWTAPE 180
Query: 170 VLTKKEYDGKIADVWSCGVTLYVML---VGAYPFEDP 203
L ++ K +DVW+ GV L+ + + YP DP
Sbjct: 181 SLAYNKFSIK-SDVWAFGVLLWEIATYGMSPYPGIDP 216
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 91/203 (44%), Gaps = 24/203 (11%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRF------ 63
IGSG FG + + + +K ++ +E +RE+ L H NIV +
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTYVIKRVKYN---NEKAEREVKALAKLDHVNIVHYNGCWDG 75
Query: 64 ---------KEVLLTPTH-LAIVMEYAAGGELFERI--CNAGRFSEDEARFFFQQLISGV 111
K + T L I ME+ G L + I + + A F+Q+ GV
Sbjct: 76 FDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGV 135
Query: 112 SYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL 171
Y HS ++ +RDLK N L +VKI DFG S + + GT Y++PE +
Sbjct: 136 DYIHSKKLINRDLKPSNIFL--VDTKQVKIGDFGLVTSLKNDGKRXRSKGTLRYMSPEQI 193
Query: 172 TKKEYDGKIADVWSCGVTLYVML 194
+ ++Y GK D+++ G+ L +L
Sbjct: 194 SSQDY-GKEVDLYALGLILAELL 215
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 92/219 (42%), Gaps = 29/219 (13%)
Query: 7 VKDIGSGNFGVAKLVRDKWTRELLAVKFIER---GQKIDEHVQREIMNHRSL-KHPNIVR 62
++ IGSG FG + + A+K ++ G +++ RE+ H L +H ++VR
Sbjct: 12 LEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVR 71
Query: 63 FKEVLLTPTHLAIVMEYAAGGELFERICNAGR----FSEDEARFFFQQLISGVSYCHSMQ 118
+ H+ I EY GG L + I R F E E + Q+ G+ Y HSM
Sbjct: 72 YFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS 131
Query: 119 ICHRDLKLENTLLDGSTAPRV-----------------KICDFGYSKSSVLHSQPKSTVG 161
+ H D+K N + ++ P KI D G+ S P+ G
Sbjct: 132 LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRI---SSPQVEEG 188
Query: 162 TPAYIAPEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPF 200
++A EVL + AD+++ +T+ V GA P
Sbjct: 189 DSRFLANEVLQENYTHLPKADIFALALTV-VXAAGAEPL 226
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 92/212 (43%), Gaps = 20/212 (9%)
Query: 1 MERYEIV--KDIGSGNFGVAKLVRDKWTRELL--AVKFIERGQKIDEHVQREIMNHRSLK 56
MER +I +G G +G ++ W + L AVK ++ E +E + +K
Sbjct: 15 MERTDITMKHKLGGGQYG--EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK 72
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFE--RICNAGRFSEDEARFFFQQLISGVSYC 114
HPN+V+ V I+ E+ G L + R CN S + Q+ S + Y
Sbjct: 73 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 132
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSK-----SSVLHSQPKSTVGTPAYIAPE 169
HRDL N L+ + VK+ DFG S+ + H+ K + + APE
Sbjct: 133 EKKNFIHRDLAARNCLVGENHL--VKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPE 187
Query: 170 VLTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
L ++ K +DVW+ GV L+ + G P+
Sbjct: 188 SLAYNKFSIK-SDVWAFGVLLWEIATYGMSPY 218
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 92/219 (42%), Gaps = 29/219 (13%)
Query: 7 VKDIGSGNFGVAKLVRDKWTRELLAVKFIER---GQKIDEHVQREIMNHRSL-KHPNIVR 62
++ IGSG FG + + A+K ++ G +++ RE+ H L +H ++VR
Sbjct: 14 LEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVR 73
Query: 63 FKEVLLTPTHLAIVMEYAAGGELFERICNAGR----FSEDEARFFFQQLISGVSYCHSMQ 118
+ H+ I EY GG L + I R F E E + Q+ G+ Y HSM
Sbjct: 74 YFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS 133
Query: 119 ICHRDLKLENTLLDGSTAPRV-----------------KICDFGYSKSSVLHSQPKSTVG 161
+ H D+K N + ++ P KI D G+ S P+ G
Sbjct: 134 LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRI---SSPQVEEG 190
Query: 162 TPAYIAPEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPF 200
++A EVL + AD+++ +T+ V GA P
Sbjct: 191 DSRFLANEVLQENYTHLPKADIFALALTV-VCAAGAEPL 228
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 92/212 (43%), Gaps = 20/212 (9%)
Query: 1 MERYEIV--KDIGSGNFGVAKLVRDKWTRELL--AVKFIERGQKIDEHVQREIMNHRSLK 56
MER +I +G G +G ++ W + L AVK ++ E +E + +K
Sbjct: 10 MERTDITMKHKLGGGQYG--EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK 67
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFE--RICNAGRFSEDEARFFFQQLISGVSYC 114
HPN+V+ V I+ E+ G L + R CN S + Q+ S + Y
Sbjct: 68 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSK-----SSVLHSQPKSTVGTPAYIAPE 169
HRDL N L+ + VK+ DFG S+ + H+ K + + APE
Sbjct: 128 EKKNFIHRDLAARNCLVGENHL--VKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPE 182
Query: 170 VLTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
L ++ K +DVW+ GV L+ + G P+
Sbjct: 183 SLAYNKFSIK-SDVWAFGVLLWEIATYGMSPY 213
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 93/212 (43%), Gaps = 20/212 (9%)
Query: 1 MERYEIV--KDIGSGNFGVAKLVRDKWTRELL--AVKFIERGQKIDEHVQREIMNHRSLK 56
MER +I +G G +G ++ W + L AVK ++ E +E + +K
Sbjct: 11 MERTDITMKHKLGGGQYG--EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK 68
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFE--RICNAGRFSEDEARFFFQQLISGVSYC 114
HPN+V+ V I++E+ G L + R CN + + Q+ S + Y
Sbjct: 69 HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 128
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSK-----SSVLHSQPKSTVGTPAYIAPE 169
HRDL N L+ + VK+ DFG S+ + H+ K + + APE
Sbjct: 129 EKKNFIHRDLAARNCLVGENHL--VKVADFGLSRLMTGDTXTAHAGAKFPI---KWTAPE 183
Query: 170 VLTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
L ++ K +DVW+ GV L+ + G P+
Sbjct: 184 SLAYNKFSIK-SDVWAFGVLLWEIATYGMSPY 214
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 92/212 (43%), Gaps = 20/212 (9%)
Query: 1 MERYEIV--KDIGSGNFGVAKLVRDKWTRELL--AVKFIERGQKIDEHVQREIMNHRSLK 56
MER +I +G G +G ++ W + L AVK ++ E +E + +K
Sbjct: 10 MERTDITMKHKLGGGQYG--EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK 67
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFE--RICNAGRFSEDEARFFFQQLISGVSYC 114
HPN+V+ V I+ E+ G L + R CN S + Q+ S + Y
Sbjct: 68 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSK-----SSVLHSQPKSTVGTPAYIAPE 169
HRDL N L+ + VK+ DFG S+ + H+ K + + APE
Sbjct: 128 EKKNFIHRDLAARNCLVGENHL--VKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPE 182
Query: 170 VLTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
L ++ K +DVW+ GV L+ + G P+
Sbjct: 183 SLAYNKFSIK-SDVWAFGVLLWEIATYGMSPY 213
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 92/219 (42%), Gaps = 29/219 (13%)
Query: 7 VKDIGSGNFGVAKLVRDKWTRELLAVKFIER---GQKIDEHVQREIMNHRSL-KHPNIVR 62
++ IGSG FG + + A+K ++ G +++ RE+ H L +H ++VR
Sbjct: 14 LEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVR 73
Query: 63 FKEVLLTPTHLAIVMEYAAGGELFERICNAGR----FSEDEARFFFQQLISGVSYCHSMQ 118
+ H+ I EY GG L + I R F E E + Q+ G+ Y HSM
Sbjct: 74 YFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS 133
Query: 119 ICHRDLKLENTLLDGSTAPRV-----------------KICDFGYSKSSVLHSQPKSTVG 161
+ H D+K N + ++ P KI D G+ S P+ G
Sbjct: 134 LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRI---SSPQVEEG 190
Query: 162 TPAYIAPEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPF 200
++A EVL + AD+++ +T+ V GA P
Sbjct: 191 DSRFLANEVLQENYTHLPKADIFALALTV-VCAAGAEPL 228
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 92/219 (42%), Gaps = 29/219 (13%)
Query: 7 VKDIGSGNFGVAKLVRDKWTRELLAVKFIER---GQKIDEHVQREIMNHRSL-KHPNIVR 62
++ IGSG FG + + A+K ++ G +++ RE+ H L +H ++VR
Sbjct: 16 LEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVR 75
Query: 63 FKEVLLTPTHLAIVMEYAAGGELFERICNAGR----FSEDEARFFFQQLISGVSYCHSMQ 118
+ H+ I EY GG L + I R F E E + Q+ G+ Y HSM
Sbjct: 76 YFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS 135
Query: 119 ICHRDLKLENTLLDGSTAPRV-----------------KICDFGYSKSSVLHSQPKSTVG 161
+ H D+K N + ++ P KI D G+ S P+ G
Sbjct: 136 LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRI---SSPQVEEG 192
Query: 162 TPAYIAPEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPF 200
++A EVL + AD+++ +T+ V GA P
Sbjct: 193 DSRFLANEVLQENYTHLPKADIFALALTV-VCAAGAEPL 230
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 93/212 (43%), Gaps = 20/212 (9%)
Query: 1 MERYEIV--KDIGSGNFGVAKLVRDKWTRELL--AVKFIERGQKIDEHVQREIMNHRSLK 56
MER +I +G G +G ++ W + L AVK ++ E +E + +K
Sbjct: 15 MERTDITMKHKLGGGQYG--EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK 72
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFE--RICNAGRFSEDEARFFFQQLISGVSYC 114
HPN+V+ V I++E+ G L + R CN + + Q+ S + Y
Sbjct: 73 HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSK-----SSVLHSQPKSTVGTPAYIAPE 169
HRDL N L+ + VK+ DFG S+ + H+ K + + APE
Sbjct: 133 EKKNFIHRDLAARNCLVGENHL--VKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPE 187
Query: 170 VLTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
L ++ K +DVW+ GV L+ + G P+
Sbjct: 188 SLAYNKFSIK-SDVWAFGVLLWEIATYGMSPY 218
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 102/216 (47%), Gaps = 26/216 (12%)
Query: 5 EIVKDIGSGNFG--VAKLVRDKWTREL-LAVKFIERGQKIDEHVQREIMNHRSL----KH 57
+I + IG+G FG + ++ RE+ +A+K ++ G E +R+ ++ S+ H
Sbjct: 10 KIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYT--EKQRRDFLSEASIMGQFDH 67
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGEL--FERICNAGRFSEDEARFFFQQLISGVSYCH 115
PN++ + V+ T + I+ E+ G L F R N G+F+ + + + +G+ Y
Sbjct: 68 PNVIHLEGVVTKSTPVMIITEFMENGSLDSFLR-QNDGQFTVIQLVGMLRGIAAGMKYLA 126
Query: 116 SMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA--------YIA 167
M HR L N L++ + K+ DFG S+ L T A + A
Sbjct: 127 DMNYVHRALAARNILVNSNLV--CKVSDFGLSR--FLEDDTSDPTYTSALGGKIPIRWTA 182
Query: 168 PEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPFED 202
PE + +++ +DVWS G+ ++ VM G P+ D
Sbjct: 183 PEAIQYRKFTSA-SDVWSYGIVMWEVMSYGERPYWD 217
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 92/212 (43%), Gaps = 20/212 (9%)
Query: 1 MERYEIV--KDIGSGNFGVAKLVRDKWTRELL--AVKFIERGQKIDEHVQREIMNHRSLK 56
MER +I +G G +G ++ W + L AVK ++ E +E + +K
Sbjct: 15 MERTDITMKHKLGGGQYG--EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK 72
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFE--RICNAGRFSEDEARFFFQQLISGVSYC 114
HPN+V+ V I+ E+ G L + R CN + + Q+ S + Y
Sbjct: 73 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSK-----SSVLHSQPKSTVGTPAYIAPE 169
HRDL N L+ + VK+ DFG S+ + H+ K + + APE
Sbjct: 133 EKKNFIHRDLAARNCLVGENHL--VKVADFGLSRLMTGDTXTAHAGAKFPI---KWTAPE 187
Query: 170 VLTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
L ++ K +DVW+ GV L+ + G P+
Sbjct: 188 SLAYNKFSIK-SDVWAFGVLLWEIATYGMSPY 218
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 24/212 (11%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFI---ERGQKIDEHVQREIMNHRSLKH 57
+ +YE + IG G FG R + T + +A+K + + REI + LKH
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 58 PNIVRFKEVLLTPTH--------LAIVMEYAAGGELFERICNA-GRFSEDEARFFFQQLI 108
N+V E+ T + +V ++ +L + N +F+ E + Q L+
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLL 135
Query: 109 SGVSYCHSMQICHRDLKLENTLL--DGSTAPRVKICDFGYSKSSVL--HSQPK---STVG 161
+G+ Y H +I HRD+K N L+ DG +K+ DFG +++ L +SQP + V
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDGV----LKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 162 TPAYIAPEVLTKKEYDGKIADVWSCGVTLYVM 193
T Y PE+L + G D+W G + M
Sbjct: 192 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 24/212 (11%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFI---ERGQKIDEHVQREIMNHRSLKH 57
+ +YE + IG G FG R + T + +A+K + + REI + LKH
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 75
Query: 58 PNIVRFKEVLLTPTH--------LAIVMEYAAGGELFERICNA-GRFSEDEARFFFQQLI 108
N+V E+ T + +V ++ +L + N +F+ E + Q L+
Sbjct: 76 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLL 134
Query: 109 SGVSYCHSMQICHRDLKLENTLL--DGSTAPRVKICDFGYSKSSVL--HSQPK---STVG 161
+G+ Y H +I HRD+K N L+ DG +K+ DFG +++ L +SQP + V
Sbjct: 135 NGLYYIHRNKILHRDMKAANVLITRDGV----LKLADFGLARAFSLAKNSQPNRYXNRVV 190
Query: 162 TPAYIAPEVLTKKEYDGKIADVWSCGVTLYVM 193
T Y PE+L + G D+W G + M
Sbjct: 191 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 222
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 24/212 (11%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFI---ERGQKIDEHVQREIMNHRSLKH 57
+ +YE + IG G FG R + T + +A+K + + REI + LKH
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 58 PNIVRFKEVLLTPTH--------LAIVMEYAAGGELFERICNA-GRFSEDEARFFFQQLI 108
N+V E+ T + +V ++ +L + N +F+ E + Q L+
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLL 135
Query: 109 SGVSYCHSMQICHRDLKLENTLL--DGSTAPRVKICDFGYSKSSVL--HSQPK---STVG 161
+G+ Y H +I HRD+K N L+ DG +K+ DFG +++ L +SQP + V
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDGV----LKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 162 TPAYIAPEVLTKKEYDGKIADVWSCGVTLYVM 193
T Y PE+L + G D+W G + M
Sbjct: 192 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 24/212 (11%)
Query: 1 MERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFI---ERGQKIDEHVQREIMNHRSLKH 57
+ +YE + IG G FG R + T + +A+K + + REI + LKH
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 58 PNIVRFKEVLLTPTH--------LAIVMEYAAGGELFERICNA-GRFSEDEARFFFQQLI 108
N+V E+ T + +V ++ +L + N +F+ E + Q L+
Sbjct: 77 ENVVNLIEICRTKASPYNRCKASIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLL 135
Query: 109 SGVSYCHSMQICHRDLKLENTLL--DGSTAPRVKICDFGYSKSSVL--HSQPK---STVG 161
+G+ Y H +I HRD+K N L+ DG +K+ DFG +++ L +SQP + V
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDGV----LKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 162 TPAYIAPEVLTKKEYDGKIADVWSCGVTLYVM 193
T Y PE+L + G D+W G + M
Sbjct: 192 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 92/212 (43%), Gaps = 20/212 (9%)
Query: 1 MERYEIV--KDIGSGNFGVAKLVRDKWTRELL--AVKFIERGQKIDEHVQREIMNHRSLK 56
MER +I +G G +G ++ W + L AVK ++ E +E + +K
Sbjct: 217 MERTDITMKHKLGGGQYG--EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK 274
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFE--RICNAGRFSEDEARFFFQQLISGVSYC 114
HPN+V+ V I+ E+ G L + R CN S + Q+ S + Y
Sbjct: 275 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 334
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSK-----SSVLHSQPKSTVGTPAYIAPE 169
HR+L N L+ + VK+ DFG S+ + H+ K + + APE
Sbjct: 335 EKKNFIHRNLAARNCLVGENHL--VKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPE 389
Query: 170 VLTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
L ++ K +DVW+ GV L+ + G P+
Sbjct: 390 SLAYNKFSIK-SDVWAFGVLLWEIATYGMSPY 420
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 18/211 (8%)
Query: 9 DIGSGNFGVAK--LVRDKWTRELLAVKFIERG-QKID-EHVQREIMNHRSLKHPNIVRFK 64
++G GNFG + + R + + +A+K +++G +K D E + RE L +P IVR
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 65 EVLLTPTHLAIVMEYAAGGELFERICNAGRFSE---DEARFFFQQLISGVSYCHSMQICH 121
V L +VME A GG L + + G+ E Q+ G+ Y H
Sbjct: 403 GVCQAEA-LMLVMEMAGGGPLHKFL--VGKREEIPVSNVAELLHQVSMGMKYLEEKNFVH 459
Query: 122 RDLKLENTLLDGSTAPRVKICDFGYSKS---SVLHSQPKSTVGTP-AYIAPEVLTKKEYD 177
R+L N LL KI DFG SK+ + +S P + APE + +++
Sbjct: 460 RNLAARNVLLVNRHY--AKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFS 517
Query: 178 GKIADVWSCGVTLYVML-VGAYPFEDPEDPK 207
+ +DVWS GVT++ L G P++ + P+
Sbjct: 518 SR-SDVWSYGVTMWEALSYGQKPYKKMKGPE 547
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 127/323 (39%), Gaps = 70/323 (21%)
Query: 3 RYEIVKDIGSGNFG-VAKLVRDKWTRELLAVKFIERGQKIDEHVQREI--MNHRSLKHPN 59
RYEIV +G G FG V + + K +AVK ++ + E + EI + H + PN
Sbjct: 15 RYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPN 74
Query: 60 ----IVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGR--FSEDEARFFFQQLISGVSY 113
V+ E H+ IV E G ++ I G F D R Q+ V++
Sbjct: 75 STFRCVQMLEWFEHHGHICIVFE-LLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNF 133
Query: 114 CHSMQICHRDLKLENTLL---DGSTA--------------PRVKICDFGYSKSSVLHSQP 156
HS ++ H DLK EN L D + A P +K+ DFG S+ +
Sbjct: 134 LHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFG---SATYDDEH 190
Query: 157 KST-VGTPAYIAPEVLTKKEYDGKIADVWSCGVTL--YVMLVGAYPFEDPED-------- 205
ST V Y APEV+ + + DVWS G L Y + +P D ++
Sbjct: 191 HSTLVXXRHYRAPEVILALGW-SQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERI 249
Query: 206 ----PKNFRKTIGRILSVHYSFPDYVR-------VSLECK-----------------HLL 237
PK+ + + H+ D+ VS CK L+
Sbjct: 250 LGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLI 309
Query: 238 SRIFVANSEKRITIPEIKNHPWF 260
++ + KRIT+ E HP+F
Sbjct: 310 QKMLEYDPAKRITLREALKHPFF 332
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 101/236 (42%), Gaps = 38/236 (16%)
Query: 59 NIVRFKEVLLTPTHL--AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
NI++ + + P A+V EY + F+++ ++ + RF+ +L+ + YCHS
Sbjct: 99 NIIKLIDTVKDPVSKTPALVFEYINNTD-FKQLYQI--LTDFDIRFYMYELLKALDYCHS 155
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
I HRD+K N ++D ++++ D+G ++ + V + + PE+L +
Sbjct: 156 KGIMHRDVKPHNVMIDHQQK-KLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQM 214
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSV----------------H 220
D+WS G L M+ PF +D + I ++L H
Sbjct: 215 YDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHIDLDPH 274
Query: 221 YS----------FPDYVR------VSLECKHLLSRIFVANSEKRITIPEIKNHPWF 260
++ + +++ VS E LL ++ + ++R+T E HP+F
Sbjct: 275 FNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 330
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 92/212 (43%), Gaps = 20/212 (9%)
Query: 1 MERYEIV--KDIGSGNFGVAKLVRDKWTRELL--AVKFIERGQKIDEHVQREIMNHRSLK 56
MER +I +G G +G ++ W + L AVK ++ E +E + +K
Sbjct: 15 MERTDITMKHKLGGGQYG--EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK 72
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFE--RICNAGRFSEDEARFFFQQLISGVSYC 114
HPN+V+ V I+ E+ G L + R CN + + Q+ S + Y
Sbjct: 73 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSK-----SSVLHSQPKSTVGTPAYIAPE 169
HRDL N L+ + VK+ DFG S+ + H+ K + + APE
Sbjct: 133 EKKNFIHRDLAARNCLVGENHL--VKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPE 187
Query: 170 VLTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
L ++ K +DVW+ GV L+ + G P+
Sbjct: 188 SLAYNKFSIK-SDVWAFGVLLWEIATYGMSPY 218
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 92/212 (43%), Gaps = 20/212 (9%)
Query: 1 MERYEIV--KDIGSGNFGVAKLVRDKWTRELL--AVKFIERGQKIDEHVQREIMNHRSLK 56
MER +I +G G +G ++ W + L AVK ++ E +E + +K
Sbjct: 14 MERTDITMKHKLGGGQYG--EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK 71
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFE--RICNAGRFSEDEARFFFQQLISGVSYC 114
HPN+V+ V I+ E+ G L + R CN + + Q+ S + Y
Sbjct: 72 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 131
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSK-----SSVLHSQPKSTVGTPAYIAPE 169
HRDL N L+ + VK+ DFG S+ + H+ K + + APE
Sbjct: 132 EKKNFIHRDLAARNCLVGENHL--VKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPE 186
Query: 170 VLTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
L ++ K +DVW+ GV L+ + G P+
Sbjct: 187 SLAYNKFSIK-SDVWAFGVLLWEIATYGMSPY 217
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 101/236 (42%), Gaps = 38/236 (16%)
Query: 59 NIVRFKEVLLTPTHL--AIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHS 116
NI++ + + P A+V EY + F+++ ++ + RF+ +L+ + YCHS
Sbjct: 94 NIIKLIDTVKDPVSKTPALVFEYINNTD-FKQLYQI--LTDFDIRFYMYELLKALDYCHS 150
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
I HRD+K N ++D ++++ D+G ++ + V + + PE+L +
Sbjct: 151 KGIMHRDVKPHNVMIDHQQK-KLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQM 209
Query: 177 DGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSV----------------H 220
D+WS G L M+ PF +D + I ++L H
Sbjct: 210 YDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHIDLDPH 269
Query: 221 YS----------FPDYVR------VSLECKHLLSRIFVANSEKRITIPEIKNHPWF 260
++ + +++ VS E LL ++ + ++R+T E HP+F
Sbjct: 270 FNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 325
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 92/212 (43%), Gaps = 20/212 (9%)
Query: 1 MERYEIV--KDIGSGNFGVAKLVRDKWTRELL--AVKFIERGQKIDEHVQREIMNHRSLK 56
MER +I +G G +G ++ W + L AVK ++ E +E + +K
Sbjct: 10 MERTDITMKHKLGGGQYG--EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK 67
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFE--RICNAGRFSEDEARFFFQQLISGVSYC 114
HPN+V+ V I+ E+ G L + R CN + + Q+ S + Y
Sbjct: 68 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 127
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSK-----SSVLHSQPKSTVGTPAYIAPE 169
HRDL N L+ + VK+ DFG S+ + H+ K + + APE
Sbjct: 128 EKKNFIHRDLAARNCLVGENHL--VKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPE 182
Query: 170 VLTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
L ++ K +DVW+ GV L+ + G P+
Sbjct: 183 SLAYNKFSIK-SDVWAFGVLLWEIATYGMSPY 213
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 92/212 (43%), Gaps = 20/212 (9%)
Query: 1 MERYEIV--KDIGSGNFGVAKLVRDKWTRELL--AVKFIERGQKIDEHVQREIMNHRSLK 56
MER +I +G G +G ++ W + L AVK ++ E +E + +K
Sbjct: 12 MERTDITMKHKLGGGQYG--EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK 69
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFE--RICNAGRFSEDEARFFFQQLISGVSYC 114
HPN+V+ V I+ E+ G L + R CN + + Q+ S + Y
Sbjct: 70 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 129
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSK-----SSVLHSQPKSTVGTPAYIAPE 169
HRDL N L+ + VK+ DFG S+ + H+ K + + APE
Sbjct: 130 EKKNFIHRDLAARNCLVGENHL--VKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPE 184
Query: 170 VLTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
L ++ K +DVW+ GV L+ + G P+
Sbjct: 185 SLAYNKFSIK-SDVWAFGVLLWEIATYGMSPY 215
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 92/212 (43%), Gaps = 20/212 (9%)
Query: 1 MERYEIV--KDIGSGNFGVAKLVRDKWTRELL--AVKFIERGQKIDEHVQREIMNHRSLK 56
MER +I +G G +G ++ W + L AVK ++ E +E + +K
Sbjct: 10 MERTDITMKHKLGGGQYG--EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK 67
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFE--RICNAGRFSEDEARFFFQQLISGVSYC 114
HPN+V+ V I+ E+ G L + R CN + + Q+ S + Y
Sbjct: 68 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 127
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSK-----SSVLHSQPKSTVGTPAYIAPE 169
HRDL N L+ + VK+ DFG S+ + H+ K + + APE
Sbjct: 128 EKKNFIHRDLAARNCLVGENHL--VKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPE 182
Query: 170 VLTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
L ++ K +DVW+ GV L+ + G P+
Sbjct: 183 SLAYNKFSIK-SDVWAFGVLLWEIATYGMSPY 213
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 112/257 (43%), Gaps = 18/257 (7%)
Query: 2 ERYEIVKDIGSGNFG-VAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNI 60
E ++VK +G+G FG V + T+ +AVK ++ G + E ++L+H +
Sbjct: 13 ESIKLVKRLGAGQFGEVWMGYYNNSTK--VAVKTLKPGTMSVQAFLEEANLMKTLQHDKL 70
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGEL--FERICNAGRFSEDEARFFFQQLISGVSYCHSMQ 118
VR V+ + I+ EY A G L F + G+ + F Q+ G++Y
Sbjct: 71 VRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN 130
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTP---AYIAPEVLTKKE 175
HRDL+ N L+ S + KI DFG ++ + ++ + G + APE +
Sbjct: 131 YIHRDLRAANVLV--SESLMCKIADFGLAR-VIEDNEYTAREGAKFPIKWTAPEAINFGC 187
Query: 176 YDGKIADVWSCGVTLY-VMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECK 234
+ K +DVWS G+ LY ++ G P+ P + LS Y P E
Sbjct: 188 FTIK-SDVWSFGILLYEIVTYGKIPY-----PGRTNADVMTALSQGYRMPRVENCPDELY 241
Query: 235 HLLSRIFVANSEKRITI 251
++ + +E+R T
Sbjct: 242 DIMKMCWKEKAEERPTF 258
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 92/212 (43%), Gaps = 20/212 (9%)
Query: 1 MERYEIV--KDIGSGNFGVAKLVRDKWTRELL--AVKFIERGQKIDEHVQREIMNHRSLK 56
MER +I +G G +G ++ W + L AVK ++ E +E + +K
Sbjct: 15 MERTDITMKHKLGGGQYG--EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK 72
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFE--RICNAGRFSEDEARFFFQQLISGVSYC 114
HPN+V+ V I+ E+ G L + R CN + + Q+ S + Y
Sbjct: 73 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSK-----SSVLHSQPKSTVGTPAYIAPE 169
HRDL N L+ + VK+ DFG S+ + H+ K + + APE
Sbjct: 133 EKKNFIHRDLAARNCLVGENHL--VKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPE 187
Query: 170 VLTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
L ++ K +DVW+ GV L+ + G P+
Sbjct: 188 SLAYNKFSIK-SDVWAFGVLLWEIATYGMSPY 218
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 92/212 (43%), Gaps = 20/212 (9%)
Query: 1 MERYEIV--KDIGSGNFGVAKLVRDKWTRELL--AVKFIERGQKIDEHVQREIMNHRSLK 56
MER +I +G G +G ++ W + L AVK ++ E +E + +K
Sbjct: 12 MERTDITMKHKLGGGQYG--EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK 69
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFE--RICNAGRFSEDEARFFFQQLISGVSYC 114
HPN+V+ V I+ E+ G L + R CN + + Q+ S + Y
Sbjct: 70 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 129
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSK-----SSVLHSQPKSTVGTPAYIAPE 169
HRDL N L+ + VK+ DFG S+ + H+ K + + APE
Sbjct: 130 EKKNFIHRDLAARNCLVGENHL--VKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPE 184
Query: 170 VLTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
L ++ K +DVW+ GV L+ + G P+
Sbjct: 185 SLAYNKFSIK-SDVWAFGVLLWEIATYGMSPY 215
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 92/212 (43%), Gaps = 20/212 (9%)
Query: 1 MERYEIV--KDIGSGNFGVAKLVRDKWTRELL--AVKFIERGQKIDEHVQREIMNHRSLK 56
MER +I +G G +G ++ W + L AVK ++ E +E + +K
Sbjct: 23 MERTDITMKHKLGGGQYG--EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK 80
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFE--RICNAGRFSEDEARFFFQQLISGVSYC 114
HPN+V+ V I+ E+ G L + R CN + + Q+ S + Y
Sbjct: 81 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 140
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSK-----SSVLHSQPKSTVGTPAYIAPE 169
HRDL N L+ + VK+ DFG S+ + H+ K + + APE
Sbjct: 141 EKKNFIHRDLAARNCLVGENHL--VKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPE 195
Query: 170 VLTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
L ++ K +DVW+ GV L+ + G P+
Sbjct: 196 SLAYNKFSIK-SDVWAFGVLLWEIATYGMSPY 226
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 125/323 (38%), Gaps = 57/323 (17%)
Query: 4 YEIVKDIGSGNFG-----------------VAKLVRDKWTRELLAVKFIERGQKIDEHVQ 46
Y + + I SG++G V V D T +L+ F+ + V
Sbjct: 24 YTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCK------RVL 77
Query: 47 REIMNHRSLKHPNIVRFKEVLLTPTHLAIVMEYAAGGEL---FERICNAGRF--SEDEAR 101
REI HPNI+ +++ + A+ Y + ++ + R S +
Sbjct: 78 REIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQ 137
Query: 102 FFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVG 161
+F ++ G+ H + HRDL N LL + + ICDF ++ + V
Sbjct: 138 YFMYHILLGLHVLHEAGVVHRDLHPGNILLADNN--DITICDFNLAREDTADANKTHYVT 195
Query: 162 TPAYIAPEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILS--- 218
Y APE++ + + K+ D+WS G + M F K + + +
Sbjct: 196 HRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKI 255
Query: 219 ---VHYSFP---DYVRVSLE-----------------CKHLLSRIFVANSEKRITIPEIK 255
V +S P DY+R SL L++++ N ++RI+ +
Sbjct: 256 EDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQAL 315
Query: 256 NHPWFLRNL-PIELTEGGSWQSH 277
HP+F P++LTEG S + H
Sbjct: 316 RHPYFESLFDPLDLTEGLSERFH 338
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 125/323 (38%), Gaps = 57/323 (17%)
Query: 4 YEIVKDIGSGNFG-----------------VAKLVRDKWTRELLAVKFIERGQKIDEHVQ 46
Y + + I SG++G V V D T +L+ F+ + V
Sbjct: 24 YTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCK------RVL 77
Query: 47 REIMNHRSLKHPNIVRFKEVLLTPTHLAIVMEYAAGGEL---FERICNAGRF--SEDEAR 101
REI HPNI+ +++ + A+ Y + ++ + R S +
Sbjct: 78 REIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQ 137
Query: 102 FFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVG 161
+F ++ G+ H + HRDL N LL + + ICDF ++ + V
Sbjct: 138 YFMYHILLGLHVLHEAGVVHRDLHPGNILLADNN--DITICDFNLAREDTADANKTHYVT 195
Query: 162 TPAYIAPEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILS--- 218
Y APE++ + + K+ D+WS G + M F K + + +
Sbjct: 196 HRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKI 255
Query: 219 ---VHYSFP---DYVRVSLE-----------------CKHLLSRIFVANSEKRITIPEIK 255
V +S P DY+R SL L++++ N ++RI+ +
Sbjct: 256 EDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQAL 315
Query: 256 NHPWFLRNL-PIELTEGGSWQSH 277
HP+F P++LTEG S + H
Sbjct: 316 RHPYFESLFDPLDLTEGLSERFH 338
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 92/227 (40%), Gaps = 36/227 (15%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQK--IDEHVQREIMNHRSLKHPNIV 61
+E ++ +G G FGV ++K A+K I + E V RE+ L+HP IV
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 66
Query: 62 RFKEVLLTPT------------HLAIVMEYAAGGELFERICNAGRFSEDEARF---FFQQ 106
R+ L +L I M+ L + + E E F Q
Sbjct: 67 RYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQ 126
Query: 107 LISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGY--------SKSSVLHSQP-- 156
+ V + HS + HRDLK N VK+ DFG + +VL P
Sbjct: 127 IAEAVEFLHSKGLMHRDLKPSNIFFTMDDV--VKVGDFGLVTAMDQDEEEQTVLTPMPAY 184
Query: 157 ---KSTVGTPAYIAPEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPF 200
VGT Y++PE + Y K+ D++S G+ L+ +L YPF
Sbjct: 185 ARHTGQVGTKLYMSPEQIHGNSYSHKV-DIFSLGLILFELL---YPF 227
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 17/209 (8%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIE-----RGQKIDEHVQREIMNHRSLKHPNIVRFK 64
+G G FGV + + +AVK + +++ + +EI +H N+V
Sbjct: 39 MGEGGFGV--VYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 96
Query: 65 EVLLTPTHLAIVMEYAAGGELFERI-CNAGR--FSEDEARFFFQQLISGVSYCHSMQICH 121
L +V Y G L +R+ C G S Q +G+++ H H
Sbjct: 97 GFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIH 156
Query: 122 RDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQP---KSTVGTPAYIAPEVLTKKEYDG 178
RD+K N LLD A KI DFG +++S +Q VGT AY+APE L + E
Sbjct: 157 RDIKSANILLD--EAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEAL-RGEITP 213
Query: 179 KIADVWSCGVTLYVMLVGAYPFEDPEDPK 207
K +D++S GV L ++ G ++ +P+
Sbjct: 214 K-SDIYSFGVVLLEIITGLPAVDEHREPQ 241
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 17/209 (8%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIE-----RGQKIDEHVQREIMNHRSLKHPNIVRFK 64
+G G FGV + + +AVK + +++ + +EI +H N+V
Sbjct: 39 MGEGGFGV--VYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 96
Query: 65 EVLLTPTHLAIVMEYAAGGELFERI-CNAGR--FSEDEARFFFQQLISGVSYCHSMQICH 121
L +V Y G L +R+ C G S Q +G+++ H H
Sbjct: 97 GFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIH 156
Query: 122 RDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQP---KSTVGTPAYIAPEVLTKKEYDG 178
RD+K N LLD A KI DFG +++S +Q VGT AY+APE L + E
Sbjct: 157 RDIKSANILLD--EAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEAL-RGEITP 213
Query: 179 KIADVWSCGVTLYVMLVGAYPFEDPEDPK 207
K +D++S GV L ++ G ++ +P+
Sbjct: 214 K-SDIYSFGVVLLEIITGLPAVDEHREPQ 241
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 17/209 (8%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIE-----RGQKIDEHVQREIMNHRSLKHPNIVRFK 64
+G G FGV + + +AVK + +++ + +EI +H N+V
Sbjct: 33 MGEGGFGV--VYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 90
Query: 65 EVLLTPTHLAIVMEYAAGGELFERI-CNAGR--FSEDEARFFFQQLISGVSYCHSMQICH 121
L +V Y G L +R+ C G S Q +G+++ H H
Sbjct: 91 GFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIH 150
Query: 122 RDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLTKKEYDG 178
RD+K N LLD A KI DFG +++S +Q VGT AY+APE L + E
Sbjct: 151 RDIKSANILLD--EAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEAL-RGEITP 207
Query: 179 KIADVWSCGVTLYVMLVGAYPFEDPEDPK 207
K +D++S GV L ++ G ++ +P+
Sbjct: 208 K-SDIYSFGVVLLEIITGLPAVDEHREPQ 235
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 20/212 (9%)
Query: 1 MERYEIV--KDIGSGNFGVAKLVRDKWTRELL--AVKFIERGQKIDEHVQREIMNHRSLK 56
MER +I +G G +G ++ W + L AVK ++ E +E + +K
Sbjct: 256 MERTDITMKHKLGGGQYG--EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK 313
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFE--RICNAGRFSEDEARFFFQQLISGVSYC 114
HPN+V+ V I+ E+ G L + R CN + + Q+ S + Y
Sbjct: 314 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 373
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSK-----SSVLHSQPKSTVGTPAYIAPE 169
HR+L N L+ + VK+ DFG S+ + H+ K + + APE
Sbjct: 374 EKKNFIHRNLAARNCLVGENHL--VKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPE 428
Query: 170 VLTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
L ++ K +DVW+ GV L+ + G P+
Sbjct: 429 SLAYNKFSIK-SDVWAFGVLLWEIATYGMSPY 459
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 20/212 (9%)
Query: 1 MERYEIV--KDIGSGNFGVAKLVRDKWTRELL--AVKFIERGQKIDEHVQREIMNHRSLK 56
MER +I +G G +G ++ W + L AVK ++ E +E + +K
Sbjct: 214 MERTDITMKHKLGGGQYG--EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK 271
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFE--RICNAGRFSEDEARFFFQQLISGVSYC 114
HPN+V+ V I+ E+ G L + R CN + + Q+ S + Y
Sbjct: 272 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 331
Query: 115 HSMQICHRDLKLENTLLDGSTAPRVKICDFGYSK-----SSVLHSQPKSTVGTPAYIAPE 169
HR+L N L+ + VK+ DFG S+ + H+ K + + APE
Sbjct: 332 EKKNFIHRNLAARNCLVGENHL--VKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPE 386
Query: 170 VLTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
L ++ K +DVW+ GV L+ + G P+
Sbjct: 387 SLAYNKFSIK-SDVWAFGVLLWEIATYGMSPY 417
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 100/241 (41%), Gaps = 29/241 (12%)
Query: 2 ERYEIVKDIGSGNFG-VAKLVRDKWTRELLAVKFIERGQKIDEHVQREI-----MNHRSL 55
ERYEIV +G G FG V + V + +A+K I+ +K E + EI +N +
Sbjct: 33 ERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAARLEINVLEKINEKDP 92
Query: 56 KHPNI-VRFKEVLLTPTHLAIVMEYAAGGEL-FERICNAGRFSEDEARFFFQQLISGVSY 113
+ N+ V+ + H+ I E F + N + + R QL V +
Sbjct: 93 DNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQVRHMAFQLCQAVKF 152
Query: 114 CHSMQICHRDLKLENTLLDGS-----------------TAPRVKICDFGYSKSSVLHSQP 156
H ++ H DLK EN L S + V++ DFG ++ H
Sbjct: 153 LHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFG--SATFDHEHH 210
Query: 157 KSTVGTPAYIAPEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRI 216
+ V T Y APEV+ + + + DVWS G ++ VG F+ D + + RI
Sbjct: 211 STIVSTRHYRAPEVILELGW-SQPCDVWSIGCIIFEYYVGFTLFQ-THDNREHLAMMERI 268
Query: 217 L 217
L
Sbjct: 269 L 269
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 92/208 (44%), Gaps = 17/208 (8%)
Query: 11 GSGNFGVAKLVRDKWTRELLAVKFIE-----RGQKIDEHVQREIMNHRSLKHPNIVRFKE 65
G G FGV + + +AVK + +++ + +EI +H N+V
Sbjct: 31 GEGGFGV--VYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLG 88
Query: 66 VLLTPTHLAIVMEYAAGGELFERI-CNAGR--FSEDEARFFFQQLISGVSYCHSMQICHR 122
L +V Y G L +R+ C G S Q +G+++ H HR
Sbjct: 89 FSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHHIHR 148
Query: 123 DLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLTKKEYDGK 179
D+K N LLD A KI DFG +++S +Q VGT AY APE L + E K
Sbjct: 149 DIKSANILLD--EAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEAL-RGEITPK 205
Query: 180 IADVWSCGVTLYVMLVGAYPFEDPEDPK 207
+D++S GV L ++ G ++ +P+
Sbjct: 206 -SDIYSFGVVLLEIITGLPAVDEHREPQ 232
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 63/124 (50%), Gaps = 5/124 (4%)
Query: 73 LAIVMEYAAGGELFERICN--AGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTL 130
L I ME+ G L + I + + A F+Q+ GV Y HS ++ HRDLK N
Sbjct: 109 LFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIF 168
Query: 131 LDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKIADVWSCGVTL 190
L +VKI DFG S + + GT Y++PE ++ ++Y GK D+++ G+ L
Sbjct: 169 L--VDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDY-GKEVDLYALGLIL 225
Query: 191 YVML 194
+L
Sbjct: 226 AELL 229
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 120/290 (41%), Gaps = 48/290 (16%)
Query: 2 ERYEIVKDIGSGNFGV-----AKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSL- 55
+R ++ K +G G FG A + T +AVK ++ G EH R +M+ +
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEH--RALMSELKIL 86
Query: 56 ----KHPNIVRFKEVLLTPTH-LAIVMEYAAGGELFERI-CNAGRF----SEDEARFFFQ 105
H N+V P L +++E+ G L + F ED + F
Sbjct: 87 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLT 146
Query: 106 ---------QLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQP 156
Q+ G+ + S + HRDL N LL S VKICDFG ++ + P
Sbjct: 147 LEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILL--SEKNVVKICDFGLARD--IXKDP 202
Query: 157 KSTVGTPA-----YIAPEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPFEDPEDPKNFR 210
A ++APE + + Y + +DVWS GV L+ + +GA P+ + + F
Sbjct: 203 DXVRKGDARLPLKWMAPETIFDRVYTIQ-SDVWSFGVLLWEIFSLGASPYPGVKIDEEFC 261
Query: 211 KTI---GRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNH 257
+ + R+ + Y+ P+ + L+C H +R T E+ H
Sbjct: 262 RRLKEGTRMRAPDYTTPEMYQTMLDCWH-------GEPSQRPTFSELVEH 304
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 114/262 (43%), Gaps = 29/262 (11%)
Query: 2 ERYEIVKDIGSGNFG-VAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNI 60
E ++ K +G+G FG V +K T+ +AVK ++ G E E ++L+H +
Sbjct: 182 ESLKLEKKLGAGQFGEVWMATYNKHTK--VAVKTMKPGSMSVEAFLAEANVMKTLQHDKL 239
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARF--FFQQLISGVSYCHSMQ 118
V+ V+ T + I+ E+ A G L + + + + + F Q+ G+++
Sbjct: 240 VKLHAVV-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN 298
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTP---AYIAPEVLTKKE 175
HRDL+ N L+ S KI DFG ++ VG + APE +
Sbjct: 299 YIHRDLRAANILVSASLV--CKIADFGLAR-----------VGAKFPIKWTAPEAINFGS 345
Query: 176 YDGKIADVWSCGVTLY-VMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECK 234
+ K +DVWS G+ L ++ G P+ +P+ + R L Y P E
Sbjct: 346 FTIK-SDVWSFGILLMEIVTYGRIPYPGMSNPE-----VIRALERGYRMPRPENCPEELY 399
Query: 235 HLLSRIFVANSEKRITIPEIKN 256
+++ R + E+R T I++
Sbjct: 400 NIMMRCWKNRPEERPTFEYIQS 421
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 102/237 (43%), Gaps = 38/237 (16%)
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARF--------FFQQLI 108
HPN++R+ T L I +E + + + S++ + +Q+
Sbjct: 68 HPNVIRYYCSETTDRFLYIALELCNLN--LQDLVESKNVSDENLKLQKEYNPISLLRQIA 125
Query: 109 SGVSYCHSMQICHRDLKLENTLLD-----------GSTAPRVKICDFGYSK-----SSVL 152
SGV++ HS++I HRDLK +N L+ G+ R+ I DFG K S
Sbjct: 126 SGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSF 185
Query: 153 HSQPKSTVGTPAYIAPEVL-------TKKEYDGKIADVWSCGVTLYVMLV-GAYPFEDPE 204
+ + GT + APE+L TK+ I D++S G Y +L G +PF D
Sbjct: 186 RTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSI-DIFSMGCVFYYILSKGKHPFGDKY 244
Query: 205 DPKNFRKTIGRILSVHYSFPDYVRVSL-ECKHLLSRIFVANSEKRITIPEIKNHPWF 260
++ I I S+ + R + E L+S++ + KR T ++ HP F
Sbjct: 245 SRES--NIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 299
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 117/262 (44%), Gaps = 19/262 (7%)
Query: 2 ERYEIVKDIGSGNFG-VAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNI 60
E ++ K +G+G FG V +K T+ +AVK ++ G E E ++L+H +
Sbjct: 15 ESLKLEKKLGAGQFGEVWMATYNKHTK--VAVKTMKPGSMSVEAFLAEANVMKTLQHDKL 72
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARF--FFQQLISGVSYCHSMQ 118
V+ V+ T + I+ E+ A G L + + + + + F Q+ G+++
Sbjct: 73 VKLHAVV-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN 131
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTP---AYIAPEVLTKKE 175
HRDL+ N L+ S KI DFG ++ + ++ + G + APE +
Sbjct: 132 YIHRDLRAANILVSASLV--CKIADFGLAR-VIEDNEYTAREGAKFPIKWTAPEAINFGS 188
Query: 176 YDGKIADVWSCGVTLY-VMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECK 234
+ K +DVWS G+ L ++ G P+ +P+ + R L Y P E
Sbjct: 189 FTIK-SDVWSFGILLMEIVTYGRIPYPGMSNPE-----VIRALERGYRMPRPENCPEELY 242
Query: 235 HLLSRIFVANSEKRITIPEIKN 256
+++ R + E+R T I++
Sbjct: 243 NIMMRCWKNRPEERPTFEYIQS 264
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 112/257 (43%), Gaps = 18/257 (7%)
Query: 2 ERYEIVKDIGSGNFG-VAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNI 60
E ++VK +G+G FG V + T+ +AVK ++ G + E ++L+H +
Sbjct: 12 ESIKLVKKLGAGQFGEVWMGYYNNSTK--VAVKTLKPGTMSVQAFLEEANLMKTLQHDKL 69
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGEL--FERICNAGRFSEDEARFFFQQLISGVSYCHSMQ 118
VR V+ + I+ E+ A G L F + G+ + F Q+ G++Y
Sbjct: 70 VRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN 129
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTP---AYIAPEVLTKKE 175
HRDL+ N L+ S + KI DFG ++ + ++ + G + APE +
Sbjct: 130 YIHRDLRAANVLV--SESLMCKIADFGLAR-VIEDNEYTAREGAKFPIKWTAPEAINFGC 186
Query: 176 YDGKIADVWSCGVTLY-VMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECK 234
+ K ++VWS G+ LY ++ G P+ P + LS Y P E
Sbjct: 187 FTIK-SNVWSFGILLYEIVTYGKIPY-----PGRTNADVMSALSQGYRMPRMENCPDELY 240
Query: 235 HLLSRIFVANSEKRITI 251
++ + +E+R T
Sbjct: 241 DIMKMCWKEKAEERPTF 257
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 32/227 (14%)
Query: 1 MERYEIV--KDIGSGNFGVAKLV--------RDKWTRELLAVKFIERGQKIDEHVQREIM 50
++R+ IV +++G G FG L +DK + +K + D H + E++
Sbjct: 10 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELL 69
Query: 51 NHRSLKHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAG-------------RFSE 97
+L+H +IV+F V + L +V EY G+L + + G ++
Sbjct: 70 T--NLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQ 127
Query: 98 DEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSK---SSVLHS 154
+ QQ+ +G+ Y S HRDL N L+ + VKI DFG S+ S+ +
Sbjct: 128 SQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLL--VKIGDFGMSRDVYSTDYYR 185
Query: 155 QPKSTVGTPAYIAPEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
T+ ++ PE + +++ + +DVWS GV L+ + G P+
Sbjct: 186 VGGHTMLPIRWMPPESIMYRKFTTE-SDVWSLGVVLWEIFTYGKQPW 231
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 132/294 (44%), Gaps = 47/294 (15%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIV 61
++ ++VK IG G +G ++ KW E +AVK ++ + EI ++H NI+
Sbjct: 37 KQIQMVKQIGKGRYG--EVWMGKWRGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENIL 94
Query: 62 RFKEVLL----TPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSM 117
F + + T L ++ +Y G L++ + + ++ + + +SG+ + H+
Sbjct: 95 GFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSS-VSGLCHLHTE 153
Query: 118 --------QICHRDLKLENTLLDGSTAPRVKICDFGY-----SKSSVLHSQPKSTVGTPA 164
I HRDLK +N L+ + I D G S ++ + P + VGT
Sbjct: 154 IFSTQGKPAIAHRDLKSKNILVKKNGT--CCIADLGLAVKFISDTNEVDIPPNTRVGTKR 211
Query: 165 YIAPEV----LTKKEYDGKI-ADVWSCGVTLYVM--------LVGAY--PFED--PEDP- 206
Y+ PEV L + + I AD++S G+ L+ + +V Y P+ D P DP
Sbjct: 212 YMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPS 271
Query: 207 -KNFRKTIGRILSVHYSFPDYVRVSLEC----KHLLSRIFVANSEKRITIPEIK 255
++ R+ + I + SFP+ S EC L++ + N R+T +K
Sbjct: 272 YEDMREIVC-IKKLRPSFPNRWS-SDECLRQMGKLMTECWAHNPASRLTALRVK 323
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 117/262 (44%), Gaps = 19/262 (7%)
Query: 2 ERYEIVKDIGSGNFG-VAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNI 60
E ++ K +G+G FG V +K T+ +AVK ++ G E E ++L+H +
Sbjct: 188 ESLKLEKKLGAGQFGEVWMATYNKHTK--VAVKTMKPGSMSVEAFLAEANVMKTLQHDKL 245
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARF--FFQQLISGVSYCHSMQ 118
V+ V+ T + I+ E+ A G L + + + + + F Q+ G+++
Sbjct: 246 VKLHAVV-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN 304
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTP---AYIAPEVLTKKE 175
HRDL+ N L+ S KI DFG ++ + ++ + G + APE +
Sbjct: 305 YIHRDLRAANILVSASLV--CKIADFGLAR-VIEDNEYTAREGAKFPIKWTAPEAINFGS 361
Query: 176 YDGKIADVWSCGVTLY-VMLVGAYPFEDPEDPKNFRKTIGRILSVHYSFPDYVRVSLECK 234
+ K +DVWS G+ L ++ G P+ +P+ + R L Y P E
Sbjct: 362 FTIK-SDVWSFGILLMEIVTYGRIPYPGMSNPE-----VIRALERGYRMPRPENCPEELY 415
Query: 235 HLLSRIFVANSEKRITIPEIKN 256
+++ R + E+R T I++
Sbjct: 416 NIMMRCWKNRPEERPTFEYIQS 437
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 121/292 (41%), Gaps = 50/292 (17%)
Query: 2 ERYEIVKDIGSGNFGV-----AKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSL- 55
+R ++ K +G G FG A + T +AVK ++ G EH R +M+ +
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH--RALMSELKIL 84
Query: 56 ----KHPNIVRFKEVLLTPTH-LAIVMEYAAGGELFERI-CNAGRF------SEDEARFF 103
H N+V P L +++E+ G L + F ED + F
Sbjct: 85 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 144
Query: 104 FQ---------QLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHS 154
Q+ G+ + S + HRDL N LL S VKICDFG ++ ++
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL--SEKNVVKICDFGLARD--IYK 200
Query: 155 QPKSTVGTPA-----YIAPEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPFEDPEDPKN 208
P A ++APE + + Y + +DVWS GV L+ + +GA P+ + +
Sbjct: 201 DPDXVRKGDARLPLKWMAPETIFDRVYTIQ-SDVWSFGVLLWEIFSLGASPYPGVKIDEE 259
Query: 209 FRKTI---GRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNH 257
F + + R+ + Y+ P+ + L+C H +R T E+ H
Sbjct: 260 FCRRLKEGTRMRAPDYTTPEMYQTMLDCWH-------GEPSQRPTFSELVEH 304
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 100/233 (42%), Gaps = 34/233 (14%)
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARF--------FFQQLI 108
HPN++R+ T L I +E + + + S++ + +Q+
Sbjct: 86 HPNVIRYYCSETTDRFLYIALELCNLN--LQDLVESKNVSDENLKLQKEYNPISLLRQIA 143
Query: 109 SGVSYCHSMQICHRDLKLENTLLD-----------GSTAPRVKICDFGYSK-----SSVL 152
SGV++ HS++I HRDLK +N L+ G+ R+ I DFG K
Sbjct: 144 SGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXF 203
Query: 153 HSQPKSTVGTPAYIAPEVL---TKKEYDGKIADVWSCGVTLYVMLV-GAYPFEDPEDPKN 208
+ GT + APE+L TK+ I D++S G Y +L G +PF D ++
Sbjct: 204 RXNLNNPSGTSGWRAPELLEESTKRRLTRSI-DIFSMGCVFYYILSKGKHPFGDKYSRES 262
Query: 209 FRKTIGRILSVHYSFPDYVRVSL-ECKHLLSRIFVANSEKRITIPEIKNHPWF 260
I I S+ + R + E L+S++ + KR T ++ HP F
Sbjct: 263 --NIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 313
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 121/288 (42%), Gaps = 46/288 (15%)
Query: 2 ERYEIVKDIGSGNFGV-----AKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSL- 55
+R + K +G G FG A + T +AVK ++ G EH R +M+ +
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEH--RALMSELKIL 84
Query: 56 ----KHPNIVRFKEVLLTPTH-LAIVMEYAAGGELFERI-CNAGRF--SEDEARFFFQ-- 105
H N+V P L +++E+ G L + F +D + F
Sbjct: 85 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLE 144
Query: 106 -------QLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQP-- 156
Q+ G+ + S + HRDL N LL S VKICDFG ++ ++ P
Sbjct: 145 HLICYSFQVAKGMEFLASRKXIHRDLAARNILL--SEKNVVKICDFGLARD--IYKDPDY 200
Query: 157 --KSTVGTP-AYIAPEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPFEDPEDPKNFRKT 212
K P ++APE + + Y + +DVWS GV L+ + +GA P+ + + F +
Sbjct: 201 VRKGDARLPLKWMAPETIFDRVYTIQ-SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR 259
Query: 213 I---GRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNH 257
+ R+ + Y+ P+ + L+C H +R T E+ H
Sbjct: 260 LKEGTRMRAPDYTTPEMYQTMLDCWH-------GEPSQRPTFSELVEH 300
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 100/233 (42%), Gaps = 34/233 (14%)
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARF--------FFQQLI 108
HPN++R+ T L I +E + + + S++ + +Q+
Sbjct: 86 HPNVIRYYCSETTDRFLYIALELCNLN--LQDLVESKNVSDENLKLQKEYNPISLLRQIA 143
Query: 109 SGVSYCHSMQICHRDLKLENTLLD-----------GSTAPRVKICDFGYSK-----SSVL 152
SGV++ HS++I HRDLK +N L+ G+ R+ I DFG K
Sbjct: 144 SGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXF 203
Query: 153 HSQPKSTVGTPAYIAPEVL---TKKEYDGKIADVWSCGVTLYVMLV-GAYPFEDPEDPKN 208
+ GT + APE+L TK+ I D++S G Y +L G +PF D ++
Sbjct: 204 RXNLNNPSGTSGWRAPELLEESTKRRLTRSI-DIFSMGCVFYYILSKGKHPFGDKYSRES 262
Query: 209 FRKTIGRILSVHYSFPDYVRVSL-ECKHLLSRIFVANSEKRITIPEIKNHPWF 260
I I S+ + R + E L+S++ + KR T ++ HP F
Sbjct: 263 --NIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 313
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 74/148 (50%), Gaps = 15/148 (10%)
Query: 97 EDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQP 156
ED + FQ + G+ + S + HRDL N LL + VKICDFG ++ ++ P
Sbjct: 199 EDLISYSFQ-VARGMEFLSSRKCIHRDLAARNILLSENNV--VKICDFGLARD--IYKNP 253
Query: 157 ----KSTVGTP-AYIAPEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPFEDPEDPKNFR 210
K P ++APE + K Y K +DVWS GV L+ + +G P+ + ++F
Sbjct: 254 DYVRKGDTRLPLKWMAPESIFDKIYSTK-SDVWSYGVLLWEIFSLGGSPYPGVQMDEDFC 312
Query: 211 KTIG---RILSVHYSFPDYVRVSLECKH 235
+ R+ + YS P+ ++ L+C H
Sbjct: 313 SRLREGMRMRAPEYSTPEIYQIMLDCWH 340
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 122/292 (41%), Gaps = 50/292 (17%)
Query: 2 ERYEIVKDIGSGNFGV-----AKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSL- 55
+R ++ K +G G FG A + T +AVK ++ G EH R +M+ +
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH--RALMSELKIL 84
Query: 56 ----KHPNIVRFKEVLLTPTH-LAIVMEYAAGGELFERI-CNAGRF------SEDEARFF 103
H N+V P L +++E+ G L + F ED + F
Sbjct: 85 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 144
Query: 104 FQ---------QLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHS 154
Q+ G+ + S + HRDL N LL S VKICDFG ++ ++
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL--SEKNVVKICDFGLARD--IYK 200
Query: 155 QP----KSTVGTP-AYIAPEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPFEDPEDPKN 208
P K P ++APE + + Y + +DVWS GV L+ + +GA P+ + +
Sbjct: 201 DPDYVRKGDARLPLKWMAPETIFDRVYTIQ-SDVWSFGVLLWEIFSLGASPYPGVKIDEE 259
Query: 209 FRKTI---GRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNH 257
F + + R+ + Y+ P+ + L+C H +R T E+ H
Sbjct: 260 FCRRLKEGTRMRAPDYTTPEMYQTMLDCWH-------GEPSQRPTFSELVEH 304
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 122/292 (41%), Gaps = 50/292 (17%)
Query: 2 ERYEIVKDIGSGNFGV-----AKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSL- 55
+R ++ K +G G FG A + T +AVK ++ G EH R +M+ +
Sbjct: 64 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH--RALMSELKIL 121
Query: 56 ----KHPNIVRFKEVLLTPTH-LAIVMEYAAGGELFERI-CNAGRF------SEDEARFF 103
H N+V P L +++E+ G L + F ED + F
Sbjct: 122 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 181
Query: 104 FQ---------QLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHS 154
Q+ G+ + S + HRDL N LL S VKICDFG ++ ++
Sbjct: 182 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL--SEKNVVKICDFGLARD--IYK 237
Query: 155 QP----KSTVGTP-AYIAPEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPFEDPEDPKN 208
P K P ++APE + + Y + +DVWS GV L+ + +GA P+ + +
Sbjct: 238 DPDYVRKGDARLPLKWMAPETIFDRVYTIQ-SDVWSFGVLLWEIFSLGASPYPGVKIDEE 296
Query: 209 FRKTI---GRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNH 257
F + + R+ + Y+ P+ + L+C H +R T E+ H
Sbjct: 297 FCRRLKEGTRMRAPDYTTPEMYQTMLDCWH-------GEPSQRPTFSELVEH 341
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 122/292 (41%), Gaps = 50/292 (17%)
Query: 2 ERYEIVKDIGSGNFGV-----AKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSL- 55
+R ++ K +G G FG A + T +AVK ++ G EH R +M+ +
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH--RALMSELKIL 86
Query: 56 ----KHPNIVRFKEVLLTPTH-LAIVMEYAAGGELFERICNA-------GRFSEDEARFF 103
H N+V P L +++E+ G L + + ED + F
Sbjct: 87 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDF 146
Query: 104 FQ---------QLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHS 154
Q+ G+ + S + HRDL N LL S VKICDFG ++ ++
Sbjct: 147 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL--SEKNVVKICDFGLARD--IYK 202
Query: 155 QP----KSTVGTP-AYIAPEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPFEDPEDPKN 208
P K P ++APE + + Y + +DVWS GV L+ + +GA P+ + +
Sbjct: 203 DPDYVRKGDARLPLKWMAPETIFDRVYTIQ-SDVWSFGVLLWEIFSLGASPYPGVKIDEE 261
Query: 209 FRKTI---GRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNH 257
F + + R+ + Y+ P+ + L+C H +R T E+ H
Sbjct: 262 FCRRLKEGTRMRAPDYTTPEMYQTMLDCWH-------GEPSQRPTFSELVEH 306
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 120/291 (41%), Gaps = 49/291 (16%)
Query: 2 ERYEIVKDIGSGNFGV-----AKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSL- 55
+R + K +G G FG A + T +AVK ++ G EH R +M+ +
Sbjct: 28 DRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH--RALMSELKIL 85
Query: 56 ----KHPNIVRFKEVLLTPTH-LAIVMEYAAGGELFERICNAG------RFSEDEARFFF 104
H N+V P L +++E+ G L + + + ED + F
Sbjct: 86 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFL 145
Query: 105 Q---------QLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQ 155
Q+ G+ + S + HRDL N LL S VKICDFG ++ +
Sbjct: 146 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL--SEKNVVKICDFGLARD--IXKD 201
Query: 156 PKSTVGTPA-----YIAPEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPFEDPEDPKNF 209
P A ++APE + + Y + +DVWS GV L+ + +GA P+ + + F
Sbjct: 202 PDXVRKGDARLPLKWMAPETIFDRVYTIQ-SDVWSFGVLLWEIFSLGASPYPGVKIDEEF 260
Query: 210 RKTI---GRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNH 257
+ + R+ + Y+ P+ + L+C H +R T E+ H
Sbjct: 261 CRRLKEGTRMRAPDYTTPEMYQTMLDCWH-------GEPSQRPTFSELVEH 304
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 93/223 (41%), Gaps = 41/223 (18%)
Query: 5 EIVKDIGSGNFGVAKLVR-------DKWTRELLAVKFI--ERGQKIDEHVQREIMNHRSL 55
E V+DIG G FG R + +T ++AVK + E + QRE
Sbjct: 50 EYVRDIGEGAFGRVFQARAPGLLPYEPFT--MVAVKMLKEEASADMQADFQREAALMAEF 107
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFE----------------------RICNAG 93
+PNIV+ V + ++ EY A G+L E R+ + G
Sbjct: 108 DNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPG 167
Query: 94 --RFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-- 149
S E +Q+ +G++Y + HRDL N L+ + VKI DFG S++
Sbjct: 168 PPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMV--VKIADFGLSRNIY 225
Query: 150 SVLHSQPKSTVGTPA-YIAPEVLTKKEYDGKIADVWSCGVTLY 191
S + + P ++ PE + Y + +DVW+ GV L+
Sbjct: 226 SADYYKADGNDAIPIRWMPPESIFYNRYTTE-SDVWAYGVVLW 267
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 103/241 (42%), Gaps = 18/241 (7%)
Query: 10 IGSGNFGV---AKLVRDKWTRELLAVKFIERGQKIDEHVQ--REIMNHRSLKHPNIVRFK 64
IG G+FG L+ + + AVK + R I E Q E + + HPN++
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 65 EVLL-TPTHLAIVMEYAAGGELFERICNAGRF-SEDEARFFFQQLISGVSYCHSMQICHR 122
+ L + +V+ Y G+L I N + + F Q+ G+ Y S + HR
Sbjct: 116 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 175
Query: 123 DLKLENTLLDGSTAPRVKICDFGYSKS----SVLHSQPKSTVGTPA-YIAPEVLTKKEYD 177
DL N +LD VK+ DFG ++ K+ P ++A E L +++
Sbjct: 176 DLAARNCMLDEKFT--VKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFT 233
Query: 178 GKIADVWSCGVTLY-VMLVGAYPFEDPE--DPKNFRKTIGRILSVHYSFPDYVRVSLECK 234
K +DVWS GV L+ +M GA P+ D D + R+L Y V L+C
Sbjct: 234 TK-SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCW 292
Query: 235 H 235
H
Sbjct: 293 H 293
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 103/241 (42%), Gaps = 18/241 (7%)
Query: 10 IGSGNFGV---AKLVRDKWTRELLAVKFIERGQKIDEHVQ--REIMNHRSLKHPNIVRFK 64
IG G+FG L+ + + AVK + R I E Q E + + HPN++
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 65 EVLL-TPTHLAIVMEYAAGGELFERICNAGRF-SEDEARFFFQQLISGVSYCHSMQICHR 122
+ L + +V+ Y G+L I N + + F Q+ G+ Y S + HR
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 156
Query: 123 DLKLENTLLDGSTAPRVKICDFGYSKS----SVLHSQPKSTVGTPA-YIAPEVLTKKEYD 177
DL N +LD VK+ DFG ++ K+ P ++A E L +++
Sbjct: 157 DLAARNCMLDEKFT--VKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFT 214
Query: 178 GKIADVWSCGVTLY-VMLVGAYPFEDPE--DPKNFRKTIGRILSVHYSFPDYVRVSLECK 234
K +DVWS GV L+ +M GA P+ D D + R+L Y V L+C
Sbjct: 215 TK-SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCW 273
Query: 235 H 235
H
Sbjct: 274 H 274
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 121/292 (41%), Gaps = 50/292 (17%)
Query: 2 ERYEIVKDIGSGNFGV-----AKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSL- 55
+R ++ K +G G FG A + T +AVK ++ G EH R +M+ +
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH--RALMSELKIL 75
Query: 56 ----KHPNIVRFKEVLLTPTH-LAIVMEYAAGGELFERI-CNAGRF------SEDEARFF 103
H N+V P L ++ E+ G L + F ED + F
Sbjct: 76 IHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 135
Query: 104 FQ---------QLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHS 154
Q+ G+ + S + HRDL N LL S VKICDFG ++ ++
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL--SEKNVVKICDFGLARD--IYK 191
Query: 155 QP----KSTVGTP-AYIAPEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPFEDPEDPKN 208
P K P ++APE + + Y + +DVWS GV L+ + +GA P+ + +
Sbjct: 192 DPDYVRKGDARLPLKWMAPETIFDRVYTIQ-SDVWSFGVLLWEIFSLGASPYPGVKIDEE 250
Query: 209 FRKTI---GRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNH 257
F + + R+ + Y+ P+ + L+C H +R T E+ H
Sbjct: 251 FCRRLKEGTRMRAPDYTTPEMYQTMLDCWH-------GEPSQRPTFSELVEH 295
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 121/292 (41%), Gaps = 50/292 (17%)
Query: 2 ERYEIVKDIGSGNFGV-----AKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSL- 55
+R ++ K +G G FG A + T +AVK ++ G EH R +M+ +
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH--RALMSELKIL 75
Query: 56 ----KHPNIVRFKEVLLTPTH-LAIVMEYAAGGELFERI-CNAGRF------SEDEARFF 103
H N+V P L ++ E+ G L + F ED + F
Sbjct: 76 IHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 135
Query: 104 FQ---------QLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHS 154
Q+ G+ + S + HRDL N LL S VKICDFG ++ ++
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL--SEKNVVKICDFGLARD--IYK 191
Query: 155 QP----KSTVGTP-AYIAPEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPFEDPEDPKN 208
P K P ++APE + + Y + +DVWS GV L+ + +GA P+ + +
Sbjct: 192 DPDYVRKGDARLPLKWMAPETIFDRVYTIQ-SDVWSFGVLLWEIFSLGASPYPGVKIDEE 250
Query: 209 FRKTI---GRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNH 257
F + + R+ + Y+ P+ + L+C H +R T E+ H
Sbjct: 251 FCRRLKEGTRMRAPDYTTPEMYQTMLDCWH-------GEPSQRPTFSELVEH 295
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 120/292 (41%), Gaps = 50/292 (17%)
Query: 2 ERYEIVKDIGSGNFGV-----AKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSL- 55
+R ++ K +G G FG A + T +AVK ++ G EH R +M+ +
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH--RALMSELKIL 84
Query: 56 ----KHPNIVRFKEVLLTPTH-LAIVMEYAAGGELFERI-CNAGRF------SEDEARFF 103
H N+V P L +++E+ G L + F ED + F
Sbjct: 85 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 144
Query: 104 FQ---------QLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHS 154
Q+ G+ + S + HRDL N LL S VKICDFG ++ +
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL--SEKNVVKICDFGLARD--IXK 200
Query: 155 QPKSTVGTPA-----YIAPEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPFEDPEDPKN 208
P A ++APE + + Y + +DVWS GV L+ + +GA P+ + +
Sbjct: 201 DPDXVRKGDARLPLKWMAPETIFDRVYTIQ-SDVWSFGVLLWEIFSLGASPYPGVKIDEE 259
Query: 209 FRKTI---GRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNH 257
F + + R+ + Y+ P+ + L+C H +R T E+ H
Sbjct: 260 FCRRLKEGTRMRAPDYTTPEMYQTMLDCWH-------GEPSQRPTFSELVEH 304
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 7 VKDIGSGNFGVAKLVRDKW------TRELLAVKFIERGQ--KIDEHVQREIMNHRSLKHP 58
VK +GSG FG + + W + +A+K + K ++ + E + P
Sbjct: 22 VKVLGSGAFGT--VYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSP 79
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGELFERIC-NAGRFSEDEARFFFQQLISGVSYCHSM 117
+ R + LT T + +V + G L + + N GR + + Q+ G+SY +
Sbjct: 80 YVSRLLGICLTST-VQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLEDV 138
Query: 118 QICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA---YIAPEVLTKK 174
++ HRDL N L+ + VKI DFG ++ + G ++A E + ++
Sbjct: 139 RLVHRDLAARNVLV--KSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRR 196
Query: 175 EYDGKIADVWSCGVTLY-VMLVGAYPFE 201
+ + +DVWS GVT++ +M GA P++
Sbjct: 197 RFTHQ-SDVWSYGVTVWELMTFGAKPYD 223
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 103/241 (42%), Gaps = 18/241 (7%)
Query: 10 IGSGNFGV---AKLVRDKWTRELLAVKFIERGQKIDEHVQ--REIMNHRSLKHPNIVRFK 64
IG G+FG L+ + + AVK + R I E Q E + + HPN++
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 65 EVLL-TPTHLAIVMEYAAGGELFERICNAGRF-SEDEARFFFQQLISGVSYCHSMQICHR 122
+ L + +V+ Y G+L I N + + F Q+ G+ Y S + HR
Sbjct: 90 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 149
Query: 123 DLKLENTLLDGSTAPRVKICDFGYSKS----SVLHSQPKSTVGTPA-YIAPEVLTKKEYD 177
DL N +LD VK+ DFG ++ K+ P ++A E L +++
Sbjct: 150 DLAARNCMLDEKFT--VKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFT 207
Query: 178 GKIADVWSCGVTLY-VMLVGAYPFEDPE--DPKNFRKTIGRILSVHYSFPDYVRVSLECK 234
K +DVWS GV L+ +M GA P+ D D + R+L Y V L+C
Sbjct: 208 TK-SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCW 266
Query: 235 H 235
H
Sbjct: 267 H 267
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 120/292 (41%), Gaps = 50/292 (17%)
Query: 2 ERYEIVKDIGSGNFGV-----AKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSL- 55
+R ++ K +G G FG A + T +AVK ++ G EH R +M+ +
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH--RALMSELKIL 75
Query: 56 ----KHPNIVRFKEVLLTPTH-LAIVMEYAAGGELFERI-CNAGRF------SEDEARFF 103
H N+V P L +++E+ G L + F ED + F
Sbjct: 76 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 135
Query: 104 FQ---------QLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHS 154
Q+ G+ + S + HRDL N LL S VKICDFG ++ +
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL--SEKNVVKICDFGLARD--IXK 191
Query: 155 QPKSTVGTPA-----YIAPEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPFEDPEDPKN 208
P A ++APE + + Y + +DVWS GV L+ + +GA P+ + +
Sbjct: 192 DPDXVRKGDARLPLKWMAPETIFDRVYTIQ-SDVWSFGVLLWEIFSLGASPYPGVKIDEE 250
Query: 209 FRKTI---GRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNH 257
F + + R+ + Y+ P+ + L+C H +R T E+ H
Sbjct: 251 FCRRLKEGTRMRAPDYTTPEMYQTMLDCWH-------GEPSQRPTFSELVEH 295
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 103/241 (42%), Gaps = 18/241 (7%)
Query: 10 IGSGNFGV---AKLVRDKWTRELLAVKFIERGQKIDEHVQ--REIMNHRSLKHPNIVRFK 64
IG G+FG L+ + + AVK + R I E Q E + + HPN++
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 65 EVLL-TPTHLAIVMEYAAGGELFERICNAGRF-SEDEARFFFQQLISGVSYCHSMQICHR 122
+ L + +V+ Y G+L I N + + F Q+ G+ Y S + HR
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 157
Query: 123 DLKLENTLLDGSTAPRVKICDFGYSKS----SVLHSQPKSTVGTPA-YIAPEVLTKKEYD 177
DL N +LD VK+ DFG ++ K+ P ++A E L +++
Sbjct: 158 DLAARNCMLDEKFT--VKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFT 215
Query: 178 GKIADVWSCGVTLY-VMLVGAYPFEDPE--DPKNFRKTIGRILSVHYSFPDYVRVSLECK 234
K +DVWS GV L+ +M GA P+ D D + R+L Y V L+C
Sbjct: 216 TK-SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCW 274
Query: 235 H 235
H
Sbjct: 275 H 275
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 103/241 (42%), Gaps = 18/241 (7%)
Query: 10 IGSGNFGV---AKLVRDKWTRELLAVKFIERGQKIDEHVQ--REIMNHRSLKHPNIVRFK 64
IG G+FG L+ + + AVK + R I E Q E + + HPN++
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 65 EVLL-TPTHLAIVMEYAAGGELFERICNAGRF-SEDEARFFFQQLISGVSYCHSMQICHR 122
+ L + +V+ Y G+L I N + + F Q+ G+ Y S + HR
Sbjct: 117 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 176
Query: 123 DLKLENTLLDGSTAPRVKICDFGYSKS----SVLHSQPKSTVGTPA-YIAPEVLTKKEYD 177
DL N +LD VK+ DFG ++ K+ P ++A E L +++
Sbjct: 177 DLAARNCMLDEKFT--VKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFT 234
Query: 178 GKIADVWSCGVTLY-VMLVGAYPFEDPE--DPKNFRKTIGRILSVHYSFPDYVRVSLECK 234
K +DVWS GV L+ +M GA P+ D D + R+L Y V L+C
Sbjct: 235 TK-SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCW 293
Query: 235 H 235
H
Sbjct: 294 H 294
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 103/241 (42%), Gaps = 18/241 (7%)
Query: 10 IGSGNFGV---AKLVRDKWTRELLAVKFIERGQKIDEHVQ--REIMNHRSLKHPNIVRFK 64
IG G+FG L+ + + AVK + R I E Q E + + HPN++
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 65 EVLL-TPTHLAIVMEYAAGGELFERICNAGRF-SEDEARFFFQQLISGVSYCHSMQICHR 122
+ L + +V+ Y G+L I N + + F Q+ G+ Y S + HR
Sbjct: 95 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 154
Query: 123 DLKLENTLLDGSTAPRVKICDFGYSKS----SVLHSQPKSTVGTPA-YIAPEVLTKKEYD 177
DL N +LD VK+ DFG ++ K+ P ++A E L +++
Sbjct: 155 DLAARNCMLDEKFT--VKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFT 212
Query: 178 GKIADVWSCGVTLY-VMLVGAYPFEDPE--DPKNFRKTIGRILSVHYSFPDYVRVSLECK 234
K +DVWS GV L+ +M GA P+ D D + R+L Y V L+C
Sbjct: 213 TK-SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCW 271
Query: 235 H 235
H
Sbjct: 272 H 272
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 95/208 (45%), Gaps = 19/208 (9%)
Query: 7 VKDIGSGNFGVAKLVRDKWTRE------LLAVKFIER--GQKIDEHVQREIMNHRSLKHP 58
VK +GSG FG + + W E +A+K + G K + E + S+ HP
Sbjct: 43 VKVLGSGAFGT--VYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHP 100
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGELFERIC-NAGRFSEDEARFFFQQLISGVSYCHSM 117
++VR V L+PT + +V + G L E + + + Q+ G+ Y
Sbjct: 101 HLVRLLGVCLSPT-IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEER 159
Query: 118 QICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA---YIAPEVLTKK 174
++ HRDL N L+ VKI DFG ++ + + G ++A E + +
Sbjct: 160 RLVHRDLAARNVLVKSPN--HVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYR 217
Query: 175 EYDGKIADVWSCGVTLY-VMLVGAYPFE 201
++ + +DVWS GVT++ +M G P++
Sbjct: 218 KFTHQ-SDVWSYGVTIWELMTFGGKPYD 244
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 103/241 (42%), Gaps = 18/241 (7%)
Query: 10 IGSGNFGV---AKLVRDKWTRELLAVKFIERGQKIDEHVQ--REIMNHRSLKHPNIVRFK 64
IG G+FG L+ + + AVK + R I E Q E + + HPN++
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 65 EVLL-TPTHLAIVMEYAAGGELFERICNAGRF-SEDEARFFFQQLISGVSYCHSMQICHR 122
+ L + +V+ Y G+L I N + + F Q+ G+ Y S + HR
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 157
Query: 123 DLKLENTLLDGSTAPRVKICDFGYSKS----SVLHSQPKSTVGTPA-YIAPEVLTKKEYD 177
DL N +LD VK+ DFG ++ K+ P ++A E L +++
Sbjct: 158 DLAARNCMLDEKFT--VKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFT 215
Query: 178 GKIADVWSCGVTLY-VMLVGAYPFEDPE--DPKNFRKTIGRILSVHYSFPDYVRVSLECK 234
K +DVWS GV L+ +M GA P+ D D + R+L Y V L+C
Sbjct: 216 TK-SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCW 274
Query: 235 H 235
H
Sbjct: 275 H 275
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 103/241 (42%), Gaps = 18/241 (7%)
Query: 10 IGSGNFGV---AKLVRDKWTRELLAVKFIERGQKIDEHVQ--REIMNHRSLKHPNIVRFK 64
IG G+FG L+ + + AVK + R I E Q E + + HPN++
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 65 EVLL-TPTHLAIVMEYAAGGELFERICNAGRF-SEDEARFFFQQLISGVSYCHSMQICHR 122
+ L + +V+ Y G+L I N + + F Q+ G+ Y S + HR
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 155
Query: 123 DLKLENTLLDGSTAPRVKICDFGYSKS----SVLHSQPKSTVGTPA-YIAPEVLTKKEYD 177
DL N +LD VK+ DFG ++ K+ P ++A E L +++
Sbjct: 156 DLAARNCMLDEKFT--VKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFT 213
Query: 178 GKIADVWSCGVTLY-VMLVGAYPFEDPE--DPKNFRKTIGRILSVHYSFPDYVRVSLECK 234
K +DVWS GV L+ +M GA P+ D D + R+L Y V L+C
Sbjct: 214 TK-SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCW 272
Query: 235 H 235
H
Sbjct: 273 H 273
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 103/241 (42%), Gaps = 18/241 (7%)
Query: 10 IGSGNFGV---AKLVRDKWTRELLAVKFIERGQKIDEHVQ--REIMNHRSLKHPNIVRFK 64
IG G+FG L+ + + AVK + R I E Q E + + HPN++
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 65 EVLL-TPTHLAIVMEYAAGGELFERICNAGRF-SEDEARFFFQQLISGVSYCHSMQICHR 122
+ L + +V+ Y G+L I N + + F Q+ G+ Y S + HR
Sbjct: 93 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 152
Query: 123 DLKLENTLLDGSTAPRVKICDFGYSKS----SVLHSQPKSTVGTPA-YIAPEVLTKKEYD 177
DL N +LD VK+ DFG ++ K+ P ++A E L +++
Sbjct: 153 DLAARNCMLDEKFT--VKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFT 210
Query: 178 GKIADVWSCGVTLY-VMLVGAYPFEDPE--DPKNFRKTIGRILSVHYSFPDYVRVSLECK 234
K +DVWS GV L+ +M GA P+ D D + R+L Y V L+C
Sbjct: 211 TK-SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCW 269
Query: 235 H 235
H
Sbjct: 270 H 270
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 103/241 (42%), Gaps = 18/241 (7%)
Query: 10 IGSGNFGV---AKLVRDKWTRELLAVKFIERGQKIDEHVQ--REIMNHRSLKHPNIVRFK 64
IG G+FG L+ + + AVK + R I E Q E + + HPN++
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 65 EVLL-TPTHLAIVMEYAAGGELFERICNAGRF-SEDEARFFFQQLISGVSYCHSMQICHR 122
+ L + +V+ Y G+L I N + + F Q+ G+ Y S + HR
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 156
Query: 123 DLKLENTLLDGSTAPRVKICDFGYSKS----SVLHSQPKSTVGTPA-YIAPEVLTKKEYD 177
DL N +LD VK+ DFG ++ K+ P ++A E L +++
Sbjct: 157 DLAARNCMLDEKFT--VKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFT 214
Query: 178 GKIADVWSCGVTLY-VMLVGAYPFEDPE--DPKNFRKTIGRILSVHYSFPDYVRVSLECK 234
K +DVWS GV L+ +M GA P+ D D + R+L Y V L+C
Sbjct: 215 TK-SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCW 273
Query: 235 H 235
H
Sbjct: 274 H 274
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 95/208 (45%), Gaps = 19/208 (9%)
Query: 7 VKDIGSGNFGVAKLVRDKWTRE------LLAVKFIER--GQKIDEHVQREIMNHRSLKHP 58
VK +GSG FG + + W E +A+K + G K + E + S+ HP
Sbjct: 20 VKVLGSGAFGT--VYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHP 77
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGELFERIC-NAGRFSEDEARFFFQQLISGVSYCHSM 117
++VR V L+PT + +V + G L E + + + Q+ G+ Y
Sbjct: 78 HLVRLLGVCLSPT-IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEER 136
Query: 118 QICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA---YIAPEVLTKK 174
++ HRDL N L+ VKI DFG ++ + + G ++A E + +
Sbjct: 137 RLVHRDLAARNVLVKSPN--HVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYR 194
Query: 175 EYDGKIADVWSCGVTLY-VMLVGAYPFE 201
++ + +DVWS GVT++ +M G P++
Sbjct: 195 KFTHQ-SDVWSYGVTIWELMTFGGKPYD 221
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 113/290 (38%), Gaps = 46/290 (15%)
Query: 2 ERYEIVKDIGSGNFG-----VAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSL- 55
E E K +GSG FG A + +AVK ++ +K D + +M+ +
Sbjct: 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLK--EKADSSEREALMSELKMM 102
Query: 56 ----KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERI-CNAGRFSEDEARF-------- 102
H NIV + ++ EY G+L + +FSEDE +
Sbjct: 103 TQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEE 162
Query: 103 --------------FFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSK 148
F Q+ G+ + HRDL N L+ + VKICDFG ++
Sbjct: 163 EEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLV--THGKVVKICDFGLAR 220
Query: 149 SSVLHSQ--PKSTVGTPA-YIAPEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPFEDPE 204
+ S + P ++APE L + Y K +DVWS G+ L+ + +G P+
Sbjct: 221 DIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIK-SDVWSYGILLWEIFSLGVNPYPGIP 279
Query: 205 DPKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEI 254
NF K I + F + E ++ + +S KR + P +
Sbjct: 280 VDANFYKLIQNGFKMDQPF----YATEEIYIIMQSCWAFDSRKRPSFPNL 325
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 100/237 (42%), Gaps = 38/237 (16%)
Query: 57 HPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARF--------FFQQLI 108
HPN++R+ T L I +E + + + S++ + +Q+
Sbjct: 68 HPNVIRYYCSETTDRFLYIALELCNLN--LQDLVESKNVSDENLKLQKEYNPISLLRQIA 125
Query: 109 SGVSYCHSMQICHRDLKLENTLLD-----------GSTAPRVKICDFGYSK-----SSVL 152
SGV++ HS++I HRDLK +N L+ G+ R+ I DFG K
Sbjct: 126 SGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXF 185
Query: 153 HSQPKSTVGTPAYIAPEVL-------TKKEYDGKIADVWSCGVTLYVMLV-GAYPFEDPE 204
+ GT + APE+L TK+ I D++S G Y +L G +PF D
Sbjct: 186 RXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSI-DIFSMGCVFYYILSKGKHPFGDKY 244
Query: 205 DPKNFRKTIGRILSVHYSFPDYVRVSL-ECKHLLSRIFVANSEKRITIPEIKNHPWF 260
++ I I S+ + R + E L+S++ + KR T ++ HP F
Sbjct: 245 SRES--NIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 299
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 119/292 (40%), Gaps = 50/292 (17%)
Query: 2 ERYEIVKDIGSGNFGV-----AKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSL- 55
+R ++ K +G G FG A + T +AVK ++ G EH R +M+ +
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH--RALMSELKIL 75
Query: 56 ----KHPNIVRFKEVLLTPTH-LAIVMEYAAGGELFERI-CNAGRF------SEDEARFF 103
H N+V P L ++ E+ G L + F ED + F
Sbjct: 76 IHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 135
Query: 104 FQ---------QLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHS 154
Q+ G+ + S + HRDL N LL S VKICDFG ++ +
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL--SEKNVVKICDFGLARD--IXK 191
Query: 155 QPKSTVGTPA-----YIAPEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPFEDPEDPKN 208
P A ++APE + + Y + +DVWS GV L+ + +GA P+ + +
Sbjct: 192 DPDXVRKGDARLPLKWMAPETIFDRVYTIQ-SDVWSFGVLLWEIFSLGASPYPGVKIDEE 250
Query: 209 FRKTI---GRILSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNH 257
F + + R+ + Y+ P+ + L+C H +R T E+ H
Sbjct: 251 FCRRLKEGTRMRAPDYTTPEMYQTMLDCWH-------GEPSQRPTFSELVEH 295
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 70/158 (44%), Gaps = 14/158 (8%)
Query: 53 RSLKHPNIVRFKEVLLTPT--HLAIVMEYAAGGELFERICNAGRFSEDEARF--FFQQLI 108
R HPN++ +P H ++ + G L+ + F D+++ F +
Sbjct: 62 RIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMA 121
Query: 109 SGVSYCHSMQ--ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYI 166
G+++ H+++ I L + ++D R+ + D +S Q + PA++
Sbjct: 122 RGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFS------FQSPGRMYAPAWV 175
Query: 167 APEVLTKKEYDG--KIADVWSCGVTLYVMLVGAYPFED 202
APE L KK D + AD+WS V L+ ++ PF D
Sbjct: 176 APEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFAD 213
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 92/229 (40%), Gaps = 28/229 (12%)
Query: 2 ERYEIVKDIGSGNFG-VAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNI 60
ERYEIV ++G G FG V + + + +A+K I K E + EI + +K +
Sbjct: 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDK 78
Query: 61 V-RFKEVLLTP-----THLAIVMEYAAGGEL-FERICNAGRFSEDEARFFFQQLISGVSY 113
+F VL++ H+ I E F + N + R QL + +
Sbjct: 79 ENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRF 138
Query: 114 CHSMQICHRDLKLENTLLDGS-----------------TAPRVKICDFGYSKSSVLHSQP 156
H Q+ H DLK EN L S +++ DFG ++ H
Sbjct: 139 LHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFG--SATFDHEHH 196
Query: 157 KSTVGTPAYIAPEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPED 205
+ V T Y PEV+ + + + DVWS G L+ G F+ E+
Sbjct: 197 TTIVATRHYRPPEVILELGW-AQPCDVWSIGCILFEYYRGFTLFQTHEN 244
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 92/229 (40%), Gaps = 28/229 (12%)
Query: 2 ERYEIVKDIGSGNFG-VAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNI 60
ERYEIV ++G G FG V + + + +A+K I K E + EI + +K +
Sbjct: 51 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDK 110
Query: 61 V-RFKEVLLTP-----THLAIVMEYAAGGEL-FERICNAGRFSEDEARFFFQQLISGVSY 113
+F VL++ H+ I E F + N + R QL + +
Sbjct: 111 ENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRF 170
Query: 114 CHSMQICHRDLKLENTLLDGS-----------------TAPRVKICDFGYSKSSVLHSQP 156
H Q+ H DLK EN L S +++ DFG ++ H
Sbjct: 171 LHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFG--SATFDHEHH 228
Query: 157 KSTVGTPAYIAPEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPED 205
+ V T Y PEV+ + + + DVWS G L+ G F+ E+
Sbjct: 229 TTIVATRHYRPPEVILELGW-AQPCDVWSIGCILFEYYRGFTLFQTHEN 276
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 106/243 (43%), Gaps = 47/243 (19%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRFKEVLLT 69
+G G +G ++ R W E +AVK + + E+ N L+H NI+ F +T
Sbjct: 16 VGKGRYG--EVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMT 73
Query: 70 PTH----LAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCH--------SM 117
H L ++ Y G L++ + + R + SG+++ H
Sbjct: 74 SRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVL-SIASGLAHLHIEIFGTQGKP 132
Query: 118 QICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--------VGTPAYIAPE 169
I HRDLK +N L+ + + I D G +V+HSQ + VGT Y+APE
Sbjct: 133 AIAHRDLKSKNILVKKN--GQCCIADLGL---AVMHSQSTNQLDVGNNPRVGTKRYMAPE 187
Query: 170 VLTKKE----YDG-KIADVWSCGVTLYVM--------LVGAY--PFED--PEDP--KNFR 210
VL + +D K D+W+ G+ L+ + +V Y PF D P DP ++ R
Sbjct: 188 VLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMR 247
Query: 211 KTI 213
K +
Sbjct: 248 KVV 250
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 107/242 (44%), Gaps = 20/242 (8%)
Query: 10 IGSGNFGV---AKLVRDKWTRELLAVKFIERGQKIDEHVQ--REIMNHRSLKHPNIVRFK 64
IG G+FG L+ + + AVK + R I E Q E + + HPN++
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 65 EVLL-TPTHLAIVMEYAAGGELFERICNAGRF-SEDEARFFFQQLISGVSYCHSMQICHR 122
+ L + +V+ Y G+L I N + + F Q+ G+ + S + HR
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR 158
Query: 123 DLKLENTLLDGSTAPRVKICDFGYSKSSV------LHSQPKSTVGTPAYIAPEVLTKKEY 176
DL N +LD VK+ DFG ++ + +H++ + + ++A E L +++
Sbjct: 159 DLAARNCMLDEKFT--VKVADFGLARDMLDKEFDSVHNKTGAKLPV-KWMALESLQTQKF 215
Query: 177 DGKIADVWSCGVTLY-VMLVGAYPFEDPE--DPKNFRKTIGRILSVHYSFPDYVRVSLEC 233
K +DVWS GV L+ +M GA P+ D D + R+L Y V L+C
Sbjct: 216 TTK-SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKC 274
Query: 234 KH 235
H
Sbjct: 275 WH 276
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 92/229 (40%), Gaps = 28/229 (12%)
Query: 2 ERYEIVKDIGSGNFG-VAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNI 60
ERYEIV ++G G FG V + + + +A+K I K E + EI + +K +
Sbjct: 28 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDK 87
Query: 61 V-RFKEVLLTP-----THLAIVMEYAAGGEL-FERICNAGRFSEDEARFFFQQLISGVSY 113
+F VL++ H+ I E F + N + R QL + +
Sbjct: 88 ENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRF 147
Query: 114 CHSMQICHRDLKLENTLLDGS-----------------TAPRVKICDFGYSKSSVLHSQP 156
H Q+ H DLK EN L S +++ DFG ++ H
Sbjct: 148 LHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFG--SATFDHEHH 205
Query: 157 KSTVGTPAYIAPEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPED 205
+ V T Y PEV+ + + + DVWS G L+ G F+ E+
Sbjct: 206 TTIVATRHYRPPEVILELGW-AQPCDVWSIGCILFEYYRGFTLFQTHEN 253
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 100/231 (43%), Gaps = 38/231 (16%)
Query: 6 IVKDIGSGNFGVAKLVRDKWTRELLAVKFIE------RGQKIDEHVQREIMNHRSLKHPN 59
+++ +G G FG L + ++ AVK + R KI+ + ++I + + + N
Sbjct: 39 VIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKI-QNDDINNNN 97
Query: 60 IVRFKEVLLTPTHLAIVMEYAAGGELFERIC--NAGRFSEDEARFFFQQLISGVSYCHSM 117
IV++ + H+ ++ E G L+E I N F ++ + + +++ ++Y M
Sbjct: 98 IVKYHGKFMYYDHMCLIFE-PLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM 156
Query: 118 QICHRDLKLENTLLDG-----------------------STAPRVKICDFGYSK-SSVLH 153
+ H DLK EN LLD + + +K+ DFG + S H
Sbjct: 157 SLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH 216
Query: 154 SQPKSTVGTPAYIAPEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPE 204
S + T Y APEV+ +D +D+WS G L + G+ F E
Sbjct: 217 G---SIINTRQYRAPEVILNLGWDVS-SDMWSFGCVLAELYTGSLLFRTHE 263
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 114/261 (43%), Gaps = 52/261 (19%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKI------DE--HVQR------- 47
RY +V+ +G G+F L +D +A+K + RG K+ DE +QR
Sbjct: 20 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIV-RGDKVYTEAAEDEIKLLQRVNDADNT 78
Query: 48 -----------EIMNHRSLKHPNIVRFKEV--LLTPTHLAIVMEYAAGGELFERICNAGR 94
++++H + K PN V V +L LA++ +Y G + +
Sbjct: 79 KEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISK 138
Query: 95 FSEDEARFFFQQLISGVSYCHSM-QICHRDLKLENTLLDGSTAP----RVKICDFGYSKS 149
QL+ G+ Y H I H D+K EN L++ +P ++KI D G +
Sbjct: 139 -----------QLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLG--NA 185
Query: 150 SVLHSQPKSTVGTPAYIAPEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNF 209
+++ T Y +PEVL + G AD+WS ++ ++ G + FE P++ ++
Sbjct: 186 CWYDEHYTNSIQTREYRSPEVLLGAPW-GCGADIWSTACLIFELITGDFLFE-PDEGHSY 243
Query: 210 RKT---IGRILSVHYSFPDYV 227
K I +I+ + P Y+
Sbjct: 244 TKDDDHIAQIIELLGELPSYL 264
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 106/243 (43%), Gaps = 47/243 (19%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRFKEVLLT 69
+G G +G ++ R W E +AVK + + E+ N L+H NI+ F +T
Sbjct: 16 VGKGRYG--EVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMT 73
Query: 70 PTH----LAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCH--------SM 117
H L ++ Y G L++ + + R + SG+++ H
Sbjct: 74 SRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVL-SIASGLAHLHIEIFGTQGKP 132
Query: 118 QICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--------VGTPAYIAPE 169
I HRDLK +N L+ + + I D G +V+HSQ + VGT Y+APE
Sbjct: 133 AIAHRDLKSKNILVKKN--GQCCIADLGL---AVMHSQSTNQLDVGNNPRVGTKRYMAPE 187
Query: 170 VLTKKE----YDG-KIADVWSCGVTLYVM--------LVGAY--PFED--PEDP--KNFR 210
VL + +D K D+W+ G+ L+ + +V Y PF D P DP ++ R
Sbjct: 188 VLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMR 247
Query: 211 KTI 213
K +
Sbjct: 248 KVV 250
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 114/261 (43%), Gaps = 52/261 (19%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKI------DE--HVQR------- 47
RY +V+ +G G+F L +D +A+K + RG K+ DE +QR
Sbjct: 20 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIV-RGDKVYTEAAEDEIKLLQRVNDADNT 78
Query: 48 -----------EIMNHRSLKHPNIVRFKEV--LLTPTHLAIVMEYAAGGELFERICNAGR 94
++++H + K PN V V +L LA++ +Y G + +
Sbjct: 79 KEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISK 138
Query: 95 FSEDEARFFFQQLISGVSYCHSM-QICHRDLKLENTLLDGSTAP----RVKICDFGYSKS 149
QL+ G+ Y H I H D+K EN L++ +P ++KI D G +
Sbjct: 139 -----------QLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLG--NA 185
Query: 150 SVLHSQPKSTVGTPAYIAPEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNF 209
+++ T Y +PEVL + G AD+WS ++ ++ G + FE P++ ++
Sbjct: 186 CWYDEHYTNSIQTREYRSPEVLLGAPW-GCGADIWSTACLIFELITGDFLFE-PDEGHSY 243
Query: 210 RKT---IGRILSVHYSFPDYV 227
K I +I+ + P Y+
Sbjct: 244 TKDDDHIAQIIELLGELPSYL 264
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 106/243 (43%), Gaps = 47/243 (19%)
Query: 10 IGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRFKEVLLT 69
+G G +G ++ R W E +AVK + + E+ N L+H NI+ F +T
Sbjct: 45 VGKGRYG--EVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMT 102
Query: 70 PTH----LAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCH--------SM 117
H L ++ Y G L++ + + R + SG+++ H
Sbjct: 103 SRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVL-SIASGLAHLHIEIFGTQGKP 161
Query: 118 QICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKST--------VGTPAYIAPE 169
I HRDLK +N L+ + + I D G +V+HSQ + VGT Y+APE
Sbjct: 162 AIAHRDLKSKNILVKKN--GQCCIADLGL---AVMHSQSTNQLDVGNNPRVGTKRYMAPE 216
Query: 170 VLTKKE----YDG-KIADVWSCGVTLYVM--------LVGAY--PFED--PEDP--KNFR 210
VL + +D K D+W+ G+ L+ + +V Y PF D P DP ++ R
Sbjct: 217 VLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMR 276
Query: 211 KTI 213
K +
Sbjct: 277 KVV 279
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 106/242 (43%), Gaps = 20/242 (8%)
Query: 10 IGSGNFGV---AKLVRDKWTRELLAVKFIERGQKIDEHVQ--REIMNHRSLKHPNIVRFK 64
IG G+FG L+ + + AVK + R I E Q E + + HPN++
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 156
Query: 65 EVLL-TPTHLAIVMEYAAGGELFERICNAGRF-SEDEARFFFQQLISGVSYCHSMQICHR 122
+ L + +V+ Y G+L I N + + F Q+ G+ + S + HR
Sbjct: 157 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR 216
Query: 123 DLKLENTLLDGSTAPRVKICDFGYSKS------SVLHSQPKSTVGTPAYIAPEVLTKKEY 176
DL N +LD VK+ DFG ++ +H++ + + ++A E L +++
Sbjct: 217 DLAARNCMLDEKFT--VKVADFGLARDMYDKEFDSVHNKTGAKLPV-KWMALESLQTQKF 273
Query: 177 DGKIADVWSCGVTLY-VMLVGAYPFEDPE--DPKNFRKTIGRILSVHYSFPDYVRVSLEC 233
K +DVWS GV L+ +M GA P+ D D + R+L Y V L+C
Sbjct: 274 TTK-SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKC 332
Query: 234 KH 235
H
Sbjct: 333 WH 334
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 106/242 (43%), Gaps = 20/242 (8%)
Query: 10 IGSGNFGV---AKLVRDKWTRELLAVKFIERGQKIDEHVQ--REIMNHRSLKHPNIVRFK 64
IG G+FG L+ + + AVK + R I E Q E + + HPN++
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 65 EVLL-TPTHLAIVMEYAAGGELFERICNAGRF-SEDEARFFFQQLISGVSYCHSMQICHR 122
+ L + +V+ Y G+L I N + + F Q+ G+ + S + HR
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR 157
Query: 123 DLKLENTLLDGSTAPRVKICDFGYSKS------SVLHSQPKSTVGTPAYIAPEVLTKKEY 176
DL N +LD VK+ DFG ++ +H++ + + ++A E L +++
Sbjct: 158 DLAARNCMLDEKFT--VKVADFGLARDMYDKEFDSVHNKTGAKLPV-KWMALESLQTQKF 214
Query: 177 DGKIADVWSCGVTLY-VMLVGAYPFEDPE--DPKNFRKTIGRILSVHYSFPDYVRVSLEC 233
K +DVWS GV L+ +M GA P+ D D + R+L Y V L+C
Sbjct: 215 TTK-SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKC 273
Query: 234 KH 235
H
Sbjct: 274 WH 275
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 106/242 (43%), Gaps = 20/242 (8%)
Query: 10 IGSGNFGV---AKLVRDKWTRELLAVKFIERGQKIDEHVQ--REIMNHRSLKHPNIVRFK 64
IG G+FG L+ + + AVK + R I E Q E + + HPN++
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 65 EVLL-TPTHLAIVMEYAAGGELFERICNAGRF-SEDEARFFFQQLISGVSYCHSMQICHR 122
+ L + +V+ Y G+L I N + + F Q+ G+ + S + HR
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR 158
Query: 123 DLKLENTLLDGSTAPRVKICDFGYSKS------SVLHSQPKSTVGTPAYIAPEVLTKKEY 176
DL N +LD VK+ DFG ++ +H++ + + ++A E L +++
Sbjct: 159 DLAARNCMLDEKFT--VKVADFGLARDMYDKEFDSVHNKTGAKLPV-KWMALESLQTQKF 215
Query: 177 DGKIADVWSCGVTLY-VMLVGAYPFEDPE--DPKNFRKTIGRILSVHYSFPDYVRVSLEC 233
K +DVWS GV L+ +M GA P+ D D + R+L Y V L+C
Sbjct: 216 TTK-SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKC 274
Query: 234 KH 235
H
Sbjct: 275 WH 276
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 89/206 (43%), Gaps = 27/206 (13%)
Query: 8 KDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRF---- 63
+ IG G FG ++ R KW E +AVK ++ + EI L+H NI+ F
Sbjct: 48 ESIGKGRFG--EVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAAD 105
Query: 64 KEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCH-------- 115
+ T T L +V +Y G LF+ + E + SG+++ H
Sbjct: 106 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALST-ASGLAHLHMEIVGTQG 164
Query: 116 SMQICHRDLKLENTLLDGSTAPRVKICDFGY-----SKSSVLHSQPKSTVGTPAYIAPEV 170
I HRDLK +N L+ + I D G S + + P VGT Y+APEV
Sbjct: 165 KPAIAHRDLKSKNILVKKNGT--CCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEV 222
Query: 171 L----TKKEYDG-KIADVWSCGVTLY 191
L K ++ K AD+++ G+ +
Sbjct: 223 LDDSINMKHFESFKRADIYAMGLVFW 248
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 69/175 (39%), Gaps = 31/175 (17%)
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQ 118
N++ K H+ I M Y E F I N+ F E R + L + H
Sbjct: 81 NVMGVKYCFRKNDHVVIAMPYLEH-ESFLDILNSLSFQE--VREYMLNLFKALKRIHQFG 137
Query: 119 ICHRDLKLENTLLD---------------GSTAPRVKICDFGYSKSSVLH-SQPKSTV-- 160
I HRD+K N L + G+ ++++ F S++ SQ K ++
Sbjct: 138 IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICL 197
Query: 161 ----------GTPAYIAPEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPED 205
GTP + APEVLTK D+WS GV +L G YPF D
Sbjct: 198 SRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASD 252
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 106/242 (43%), Gaps = 20/242 (8%)
Query: 10 IGSGNFGV---AKLVRDKWTRELLAVKFIERGQKIDEHVQ--REIMNHRSLKHPNIVRFK 64
IG G+FG L+ + + AVK + R I E Q E + + HPN++
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 65 EVLL-TPTHLAIVMEYAAGGELFERICNAGRF-SEDEARFFFQQLISGVSYCHSMQICHR 122
+ L + +V+ Y G+L I N + + F Q+ G+ + S + HR
Sbjct: 103 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR 162
Query: 123 DLKLENTLLDGSTAPRVKICDFGYSKS------SVLHSQPKSTVGTPAYIAPEVLTKKEY 176
DL N +LD VK+ DFG ++ +H++ + + ++A E L +++
Sbjct: 163 DLAARNCMLDEKFT--VKVADFGLARDMYDKEFDSVHNKTGAKLPV-KWMALESLQTQKF 219
Query: 177 DGKIADVWSCGVTLY-VMLVGAYPFEDPE--DPKNFRKTIGRILSVHYSFPDYVRVSLEC 233
K +DVWS GV L+ +M GA P+ D D + R+L Y V L+C
Sbjct: 220 TTK-SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKC 278
Query: 234 KH 235
H
Sbjct: 279 WH 280
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 106/242 (43%), Gaps = 20/242 (8%)
Query: 10 IGSGNFGV---AKLVRDKWTRELLAVKFIERGQKIDEHVQ--REIMNHRSLKHPNIVRFK 64
IG G+FG L+ + + AVK + R I E Q E + + HPN++
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 65 EVLL-TPTHLAIVMEYAAGGELFERICNAGRF-SEDEARFFFQQLISGVSYCHSMQICHR 122
+ L + +V+ Y G+L I N + + F Q+ G+ + S + HR
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR 157
Query: 123 DLKLENTLLDGSTAPRVKICDFGYSKS------SVLHSQPKSTVGTPAYIAPEVLTKKEY 176
DL N +LD VK+ DFG ++ +H++ + + ++A E L +++
Sbjct: 158 DLAARNCMLDEKFT--VKVADFGLARDMYDKEFDSVHNKTGAKLPV-KWMALESLQTQKF 214
Query: 177 DGKIADVWSCGVTLY-VMLVGAYPFEDPE--DPKNFRKTIGRILSVHYSFPDYVRVSLEC 233
K +DVWS GV L+ +M GA P+ D D + R+L Y V L+C
Sbjct: 215 TTK-SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKC 273
Query: 234 KH 235
H
Sbjct: 274 WH 275
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 23/165 (13%)
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFE----RICNAGRFSED-----EARFFFQQ 106
KH NI+ L +++EYA+ G L E R +S D E + F+
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 107 LIS-------GVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLHSQPKS 158
L+S G+ Y S + HRDL N L+ + +KI DFG ++ + + K+
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV--MKIADFGLARDINNIDXXKKT 216
Query: 159 TVG--TPAYIAPEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
T G ++APE L + Y + +DVWS GV ++ + +G P+
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQ-SDVWSFGVLMWEIFTLGGSPY 260
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 89/206 (43%), Gaps = 27/206 (13%)
Query: 8 KDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRF---- 63
+ IG G FG ++ R KW E +AVK ++ + EI L+H NI+ F
Sbjct: 9 ESIGKGRFG--EVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAAD 66
Query: 64 KEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCH-------- 115
+ T T L +V +Y G LF+ + E + SG+++ H
Sbjct: 67 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALST-ASGLAHLHMEIVGTQG 125
Query: 116 SMQICHRDLKLENTLLDGSTAPRVKICDFGY-----SKSSVLHSQPKSTVGTPAYIAPEV 170
I HRDLK +N L+ + I D G S + + P VGT Y+APEV
Sbjct: 126 KPAIAHRDLKSKNILVKKNGT--CCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEV 183
Query: 171 L----TKKEYDG-KIADVWSCGVTLY 191
L K ++ K AD+++ G+ +
Sbjct: 184 LDDSINMKHFESFKRADIYAMGLVFW 209
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 89/206 (43%), Gaps = 27/206 (13%)
Query: 8 KDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRF---- 63
+ IG G FG ++ R KW E +AVK ++ + EI L+H NI+ F
Sbjct: 10 ESIGKGRFG--EVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAAD 67
Query: 64 KEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCH-------- 115
+ T T L +V +Y G LF+ + E + SG+++ H
Sbjct: 68 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALST-ASGLAHLHMEIVGTQG 126
Query: 116 SMQICHRDLKLENTLLDGSTAPRVKICDFGY-----SKSSVLHSQPKSTVGTPAYIAPEV 170
I HRDLK +N L+ + I D G S + + P VGT Y+APEV
Sbjct: 127 KPAIAHRDLKSKNILVKKNGT--CCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEV 184
Query: 171 L----TKKEYDG-KIADVWSCGVTLY 191
L K ++ K AD+++ G+ +
Sbjct: 185 LDDSINMKHFESFKRADIYAMGLVFW 210
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 122/288 (42%), Gaps = 47/288 (16%)
Query: 8 KDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRF---- 63
+ IG G FG ++ R KW E +AVK ++ + EI L+H NI+ F
Sbjct: 12 ESIGKGRFG--EVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAAD 69
Query: 64 KEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCH-------- 115
+ T T L +V +Y G LF+ + E + SG+++ H
Sbjct: 70 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALST-ASGLAHLHMEIVGTQG 128
Query: 116 SMQICHRDLKLENTLLDGSTAPRVKICDFGY-----SKSSVLHSQPKSTVGTPAYIAPEV 170
I HRDLK +N L+ + I D G S + + P VGT Y+APEV
Sbjct: 129 KPAIAHRDLKSKNILVKKNGT--CCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEV 186
Query: 171 L----TKKEYDG-KIADVWSCGVTLYVML----VGA------YPFED--PEDP--KNFRK 211
L K ++ K AD+++ G+ + + +G P+ D P DP + RK
Sbjct: 187 LDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRK 246
Query: 212 TIGRILSVHYSFPDYVRVSLECKHLLSRI----FVANSEKRITIPEIK 255
+ + + P+ + S E ++++I + AN R+T IK
Sbjct: 247 VVCE-QKLRPNIPNRWQ-SCEALRVMAKIMRECWYANGAARLTALRIK 292
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 122/288 (42%), Gaps = 47/288 (16%)
Query: 8 KDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRF---- 63
+ IG G FG ++ R KW E +AVK ++ + EI L+H NI+ F
Sbjct: 15 ESIGKGRFG--EVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAAD 72
Query: 64 KEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCH-------- 115
+ T T L +V +Y G LF+ + E + SG+++ H
Sbjct: 73 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALST-ASGLAHLHMEIVGTQG 131
Query: 116 SMQICHRDLKLENTLLDGSTAPRVKICDFGY-----SKSSVLHSQPKSTVGTPAYIAPEV 170
I HRDLK +N L+ + I D G S + + P VGT Y+APEV
Sbjct: 132 KPAIAHRDLKSKNILVKKNGT--CCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEV 189
Query: 171 L----TKKEYDG-KIADVWSCGVTLYVML----VGA------YPFED--PEDP--KNFRK 211
L K ++ K AD+++ G+ + + +G P+ D P DP + RK
Sbjct: 190 LDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRK 249
Query: 212 TIGRILSVHYSFPDYVRVSLECKHLLSRI----FVANSEKRITIPEIK 255
+ + + P+ + S E ++++I + AN R+T IK
Sbjct: 250 VVCE-QKLRPNIPNRWQ-SCEALRVMAKIMRECWYANGAARLTALRIK 295
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 106/242 (43%), Gaps = 20/242 (8%)
Query: 10 IGSGNFGV---AKLVRDKWTRELLAVKFIERGQKIDEHVQ--REIMNHRSLKHPNIVRFK 64
IG G+FG L+ + + AVK + R I E Q E + + HPN++
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 65 EVLL-TPTHLAIVMEYAAGGELFERICNAGRF-SEDEARFFFQQLISGVSYCHSMQICHR 122
+ L + +V+ Y G+L I N + + F Q+ G+ + S + HR
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR 155
Query: 123 DLKLENTLLDGSTAPRVKICDFGYSKS------SVLHSQPKSTVGTPAYIAPEVLTKKEY 176
DL N +LD VK+ DFG ++ +H++ + + ++A E L +++
Sbjct: 156 DLAARNCMLDEKFT--VKVADFGLARDMYDKEFDSVHNKTGAKLPV-KWMALESLQTQKF 212
Query: 177 DGKIADVWSCGVTLY-VMLVGAYPFEDPE--DPKNFRKTIGRILSVHYSFPDYVRVSLEC 233
K +DVWS GV L+ +M GA P+ D D + R+L Y V L+C
Sbjct: 213 TTK-SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKC 271
Query: 234 KH 235
H
Sbjct: 272 WH 273
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 89/206 (43%), Gaps = 27/206 (13%)
Query: 8 KDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRF---- 63
+ IG G FG ++ R KW E +AVK ++ + EI L+H NI+ F
Sbjct: 35 ESIGKGRFG--EVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAAD 92
Query: 64 KEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCH-------- 115
+ T T L +V +Y G LF+ + E + SG+++ H
Sbjct: 93 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALST-ASGLAHLHMEIVGTQG 151
Query: 116 SMQICHRDLKLENTLLDGSTAPRVKICDFGY-----SKSSVLHSQPKSTVGTPAYIAPEV 170
I HRDLK +N L+ + I D G S + + P VGT Y+APEV
Sbjct: 152 KPAIAHRDLKSKNILVKKNGT--CCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEV 209
Query: 171 L----TKKEYDG-KIADVWSCGVTLY 191
L K ++ K AD+++ G+ +
Sbjct: 210 LDDSINMKHFESFKRADIYAMGLVFW 235
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 23/165 (13%)
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERI-----------CNAGRFSEDEARF-- 102
KH NI+ L +++EYA+ G L E + + R E++ F
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKD 158
Query: 103 ---FFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLHSQPKS 158
QL G+ Y S + HRDL N L+ + +KI DFG ++ + + K+
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV--MKIADFGLARDINNIDXXKKT 216
Query: 159 TVG--TPAYIAPEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
T G ++APE L + Y + +DVWS GV ++ + +G P+
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQ-SDVWSFGVLMWEIFTLGGSPY 260
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 21/161 (13%)
Query: 106 QLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQP----KSTVG 161
Q+ G+ + S + HRDL N LL S VKICDFG ++ ++ P K
Sbjct: 201 QVAKGMEFLASRKCIHRDLAARNILL--SEKNVVKICDFGLARD--IYKDPDYVRKGDAR 256
Query: 162 TP-AYIAPEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPFEDPEDPKNFRKTI---GRI 216
P ++APE + + Y + +DVWS GV L+ + +GA P+ + + F + + R+
Sbjct: 257 LPLKWMAPETIFDRVYTIQ-SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM 315
Query: 217 LSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNH 257
+ Y+ P+ + L+C H +R T E+ H
Sbjct: 316 RAPDYTTPEMYQTMLDCWH-------GEPSQRPTFSELVEH 349
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 21/161 (13%)
Query: 106 QLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQP----KSTVG 161
Q+ G+ + S + HRDL N LL S VKICDFG ++ ++ P K
Sbjct: 208 QVAKGMEFLASRKCIHRDLAARNILL--SEKNVVKICDFGLARD--IYKDPDYVRKGDAR 263
Query: 162 TP-AYIAPEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPFEDPEDPKNFRKTI---GRI 216
P ++APE + + Y + +DVWS GV L+ + +GA P+ + + F + + R+
Sbjct: 264 LPLKWMAPETIFDRVYTIQ-SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM 322
Query: 217 LSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNH 257
+ Y+ P+ + L+C H +R T E+ H
Sbjct: 323 RAPDYTTPEMYQTMLDCWH-------GEPSQRPTFSELVEH 356
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 21/161 (13%)
Query: 106 QLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQP----KSTVG 161
Q+ G+ + S + HRDL N LL S VKICDFG ++ ++ P K
Sbjct: 206 QVAKGMEFLASRKCIHRDLAARNILL--SEKNVVKICDFGLARD--IYKDPDYVRKGDAR 261
Query: 162 TP-AYIAPEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPFEDPEDPKNFRKTI---GRI 216
P ++APE + + Y + +DVWS GV L+ + +GA P+ + + F + + R+
Sbjct: 262 LPLKWMAPETIFDRVYTIQ-SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM 320
Query: 217 LSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNH 257
+ Y+ P+ + L+C H +R T E+ H
Sbjct: 321 RAPDYTTPEMYQTMLDCWH-------GEPSQRPTFSELVEH 354
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 21/161 (13%)
Query: 106 QLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQP----KSTVG 161
Q+ G+ + S + HRDL N LL S VKICDFG ++ ++ P K
Sbjct: 199 QVAKGMEFLASRKCIHRDLAARNILL--SEKNVVKICDFGLARD--IYKDPDYVRKGDAR 254
Query: 162 TP-AYIAPEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPFEDPEDPKNFRKTI---GRI 216
P ++APE + + Y + +DVWS GV L+ + +GA P+ + + F + + R+
Sbjct: 255 LPLKWMAPETIFDRVYTIQ-SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM 313
Query: 217 LSVHYSFPDYVRVSLECKHLLSRIFVANSEKRITIPEIKNH 257
+ Y+ P+ + L+C H +R T E+ H
Sbjct: 314 RAPDYTTPEMYQTMLDCWH-------GEPSQRPTFSELVEH 347
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 105/229 (45%), Gaps = 33/229 (14%)
Query: 2 ERYEIVKDIGSGNFG---VAKLV---RDKWTREL-LAVKFIERG---QKIDEHVQREIMN 51
++ + K +G G FG +A+ V +DK + +AVK ++ + + + V M
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMM 94
Query: 52 HRSLKHPNIVRFKEVLLTPTHLAIVMEYAAGGELFE----RICNAGRFSED-----EARF 102
KH NI+ L +++EYA+ G L E R +S D E +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 103 FFQQLIS-------GVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLHS 154
F+ L+S G+ Y S + HRDL N L+ + +KI DFG ++ + +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV--MKIADFGLARDINNIDY 212
Query: 155 QPKSTVG--TPAYIAPEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
K+T G ++APE L + Y + +DVWS GV ++ + +G P+
Sbjct: 213 YKKTTNGRLPVKWMAPEALFDRVYTHQ-SDVWSFGVLMWEIFTLGGSPY 260
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 23/165 (13%)
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFE----RICNAGRFSED-----EARFFFQQ 106
KH NI+ L +++EYA+ G L E R +S D E + F+
Sbjct: 91 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 150
Query: 107 LIS-------GVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLHSQPKS 158
L+S G+ Y S + HRDL N L+ + +KI DFG ++ + + K+
Sbjct: 151 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV--MKIADFGLARDINNIDYYKKT 208
Query: 159 TVG--TPAYIAPEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
T G ++APE L + Y + +DVWS GV ++ + +G P+
Sbjct: 209 TNGRLPVKWMAPEALFDRVYTHQ-SDVWSFGVLMWEIFTLGGSPY 252
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 23/165 (13%)
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFE----RICNAGRFSED-----EARFFFQQ 106
KH NI+ L +++EYA+ G L E R +S D E + F+
Sbjct: 99 KHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 107 LIS-------GVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLHSQPKS 158
L+S G+ Y S + HRDL N L+ + +KI DFG ++ + + K+
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV--MKIADFGLARDINNIDYYKKT 216
Query: 159 TVG--TPAYIAPEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
T G ++APE L + Y + +DVWS GV ++ + +G P+
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQ-SDVWSFGVLMWEIFTLGGSPY 260
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 23/165 (13%)
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFE----RICNAGRFSED-----EARFFFQQ 106
KH NI+ L +++EYA+ G L E R +S D E + F+
Sbjct: 86 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 145
Query: 107 LIS-------GVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLHSQPKS 158
L+S G+ Y S + HRDL N L+ + +KI DFG ++ + + K+
Sbjct: 146 LVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNV--MKIADFGLARDINNIDYYKKT 203
Query: 159 TVG--TPAYIAPEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
T G ++APE L + Y + +DVWS GV ++ + +G P+
Sbjct: 204 TNGRLPVKWMAPEALFDRVYTHQ-SDVWSFGVLMWEIFTLGGSPY 247
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 23/165 (13%)
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFE----RICNAGRFSED-----EARFFFQQ 106
KH NI+ L +++EYA+ G L E R +S D E + F+
Sbjct: 145 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 204
Query: 107 LIS-------GVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLHSQPKS 158
L+S G+ Y S + HRDL N L+ + +KI DFG ++ + + K+
Sbjct: 205 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV--MKIADFGLARDINNIDYYKKT 262
Query: 159 TVG--TPAYIAPEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
T G ++APE L + Y + +DVWS GV ++ + +G P+
Sbjct: 263 TNGRLPVKWMAPEALFDRVYTHQ-SDVWSFGVLMWEIFTLGGSPY 306
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 23/165 (13%)
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFE----RICNAGRFSED-----EARFFFQQ 106
KH NI+ L +++EYA+ G L E R +S D E + F+
Sbjct: 88 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 147
Query: 107 LIS-------GVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLHSQPKS 158
L+S G+ Y S + HRDL N L+ + +KI DFG ++ + + K+
Sbjct: 148 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV--MKIADFGLARDINNIDYYKKT 205
Query: 159 TVG--TPAYIAPEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
T G ++APE L + Y + +DVWS GV ++ + +G P+
Sbjct: 206 TNGRLPVKWMAPEALFDRVYTHQ-SDVWSFGVLMWEIFTLGGSPY 249
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 23/165 (13%)
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFE----RICNAGRFSED-----EARFFFQQ 106
KH NI+ L +++EYA+ G L E R +S D E + F+
Sbjct: 99 KHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 107 LIS-------GVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLHSQPKS 158
L+S G+ Y S + HRDL N L+ + +KI DFG ++ + + K+
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV--MKIADFGLARDINNIDYYKKT 216
Query: 159 TVG--TPAYIAPEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
T G ++APE L + Y + +DVWS GV ++ + +G P+
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQ-SDVWSFGVLMWEIFTLGGSPY 260
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 87/195 (44%), Gaps = 12/195 (6%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIE---RGQKIDEHVQREIMNHRSL-KH 57
+ ++ + +G G++G VR K L AVK RG K E+ +H + +H
Sbjct: 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQH 116
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARF--FFQQLISGVSYCH 115
P VR ++ L + E G ++ C A S EA+ + + + +++ H
Sbjct: 117 PCCVRLEQAWEEGGILYLQTELC--GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH 174
Query: 116 SMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKE 175
S + H D+K N L R K+ DFG + G P Y+APE+L +
Sbjct: 175 SQGLVHLDVKPANIFL--GPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELL-QGS 231
Query: 176 YDGKIADVWSCGVTL 190
Y G ADV+S G+T+
Sbjct: 232 Y-GTAADVFSLGLTI 245
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 80/168 (47%), Gaps = 14/168 (8%)
Query: 58 PNIVRFKEVLL-----TPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVS 112
PNIV+ +++ TP+ ++ EY + F+ + ++ + R++ +L+ +
Sbjct: 86 PNIVKLLDIVRDQHSKTPS---LIFEYVNNTD-FKVLYPT--LTDYDIRYYIYELLKALD 139
Query: 113 YCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLT 172
YCHS I HRD+K N ++D ++++ D+G ++ + V + + PE+L
Sbjct: 140 YCHSQGIMHRDVKPHNVMIDHELR-KLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLV 198
Query: 173 K-KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSV 219
++YD + D+WS G M+ PF D + I ++L
Sbjct: 199 DLQDYDYSL-DMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 245
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 80/168 (47%), Gaps = 14/168 (8%)
Query: 58 PNIVRFKEVLL-----TPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVS 112
PNIV+ +++ TP+ ++ EY + F+ + ++ + R++ +L+ +
Sbjct: 86 PNIVKLLDIVRDQHSKTPS---LIFEYVNNTD-FKVLYPT--LTDYDIRYYIYELLKALD 139
Query: 113 YCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLT 172
YCHS I HRD+K N ++D ++++ D+G ++ + V + + PE+L
Sbjct: 140 YCHSQGIMHRDVKPHNVMIDHELR-KLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLV 198
Query: 173 K-KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSV 219
++YD + D+WS G M+ PF D + I ++L
Sbjct: 199 DLQDYDYSL-DMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 245
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 80/168 (47%), Gaps = 14/168 (8%)
Query: 58 PNIVRFKEVLL-----TPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVS 112
PNIV+ +++ TP+ ++ EY + F+ + ++ + R++ +L+ +
Sbjct: 86 PNIVKLLDIVRDQHSKTPS---LIFEYVNNTD-FKVLYPT--LTDYDIRYYIYELLKALD 139
Query: 113 YCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLT 172
YCHS I HRD+K N ++D ++++ D+G ++ + V + + PE+L
Sbjct: 140 YCHSQGIMHRDVKPHNVMIDHELR-KLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLV 198
Query: 173 K-KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSV 219
++YD + D+WS G M+ PF D + I ++L
Sbjct: 199 DLQDYDYSL-DMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 245
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 80/168 (47%), Gaps = 14/168 (8%)
Query: 58 PNIVRFKEVLL-----TPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVS 112
PNIV+ +++ TP+ ++ EY + F+ + ++ + R++ +L+ +
Sbjct: 107 PNIVKLLDIVRDQHSKTPS---LIFEYVNNTD-FKVLYPT--LTDYDIRYYIYELLKALD 160
Query: 113 YCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLT 172
YCHS I HRD+K N ++D ++++ D+G ++ + V + + PE+L
Sbjct: 161 YCHSQGIMHRDVKPHNVMIDHELR-KLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLV 219
Query: 173 K-KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSV 219
++YD + D+WS G M+ PF D + I ++L
Sbjct: 220 DLQDYDYSL-DMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 266
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 100/215 (46%), Gaps = 27/215 (12%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRE----LLAVKFIERGQKIDEHVQREIMNHR----SL 55
++ +K +GSG FG + + W E + V E + +EI++ S+
Sbjct: 18 FKKIKVLGSGAFGT--VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE--ARFFFQ---QLISG 110
+P++ R + LT T + ++M+ G L + + R +D +++ Q+ G
Sbjct: 76 DNPHVCRLLGICLTST-VQLIMQLMPFGXLLDYV----REHKDNIGSQYLLNWCVQIAKG 130
Query: 111 VSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA---YIA 167
++Y ++ HRDL N L+ T VKI DFG +K + G ++A
Sbjct: 131 MNYLEDRRLVHRDLAARNVLV--KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 188
Query: 168 PEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPFE 201
E + + Y + +DVWS GVT++ +M G+ P++
Sbjct: 189 LESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYD 222
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 80/168 (47%), Gaps = 14/168 (8%)
Query: 58 PNIVRFKEVLL-----TPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVS 112
PNIV+ +++ TP+ ++ EY + F+ + ++ + R++ +L+ +
Sbjct: 87 PNIVKLLDIVRDQHSKTPS---LIFEYVNNTD-FKVLYPT--LTDYDIRYYIYELLKALD 140
Query: 113 YCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLT 172
YCHS I HRD+K N ++D ++++ D+G ++ + V + + PE+L
Sbjct: 141 YCHSQGIMHRDVKPHNVMIDHELR-KLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLV 199
Query: 173 K-KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSV 219
++YD + D+WS G M+ PF D + I ++L
Sbjct: 200 DLQDYDYSL-DMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 246
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 80/168 (47%), Gaps = 14/168 (8%)
Query: 58 PNIVRFKEVLL-----TPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVS 112
PNIV+ +++ TP+ ++ EY + F+ + ++ + R++ +L+ +
Sbjct: 86 PNIVKLLDIVRDQHSKTPS---LIFEYVNNTD-FKVLYPT--LTDYDIRYYIYELLKALD 139
Query: 113 YCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLT 172
YCHS I HRD+K N ++D ++++ D+G ++ + V + + PE+L
Sbjct: 140 YCHSQGIMHRDVKPHNVMIDHELR-KLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLV 198
Query: 173 K-KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSV 219
++YD + D+WS G M+ PF D + I ++L
Sbjct: 199 DLQDYDYSL-DMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 245
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 80/168 (47%), Gaps = 14/168 (8%)
Query: 58 PNIVRFKEVLL-----TPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVS 112
PNIV+ +++ TP+ ++ EY + F+ + ++ + R++ +L+ +
Sbjct: 86 PNIVKLLDIVRDQHSKTPS---LIFEYVNNTD-FKVLYPT--LTDYDIRYYIYELLKALD 139
Query: 113 YCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLT 172
YCHS I HRD+K N ++D ++++ D+G ++ + V + + PE+L
Sbjct: 140 YCHSQGIMHRDVKPHNVMIDHELR-KLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLV 198
Query: 173 K-KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSV 219
++YD + D+WS G M+ PF D + I ++L
Sbjct: 199 DLQDYDYSL-DMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 245
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 23/165 (13%)
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFE----RICNAGRFSED-----EARFFFQQ 106
KH NI+ L +++EYA+ G L E R +S D E + F+
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 107 LIS-------GVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSK--SSVLHSQPK 157
L+S G+ Y S + HRDL N L+ + +KI DFG ++ +++ + +
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV--MKIADFGLARDINNIDYYKNT 216
Query: 158 STVGTPA-YIAPEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
+ P ++APE L + Y + +DVWS GV ++ + +G P+
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQ-SDVWSFGVLMWEIFTLGGSPY 260
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 80/168 (47%), Gaps = 14/168 (8%)
Query: 58 PNIVRFKEVLL-----TPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVS 112
PNIV+ +++ TP+ ++ EY + F+ + ++ + R++ +L+ +
Sbjct: 86 PNIVKLLDIVRDQHSKTPS---LIFEYVNNTD-FKVLYPT--LTDYDIRYYIYELLKALD 139
Query: 113 YCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLT 172
YCHS I HRD+K N ++D ++++ D+G ++ + V + + PE+L
Sbjct: 140 YCHSQGIMHRDVKPHNVMIDHELR-KLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLV 198
Query: 173 K-KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSV 219
++YD + D+WS G M+ PF D + I ++L
Sbjct: 199 DLQDYDYSL-DMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 245
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 23/165 (13%)
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFE----RICNAGRFSED-----EARFFFQQ 106
KH NI+ L +++EYA+ G L E R +S D E + F+
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 107 LIS-------GVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLHSQPKS 158
L+S G+ Y S + HRDL N L+ + ++I DFG ++ + + K+
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV--MRIADFGLARDINNIDYYKKT 216
Query: 159 TVGT--PAYIAPEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
T G ++APE L + Y + +DVWS GV ++ + +G P+
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQ-SDVWSFGVLMWEIFTLGGSPY 260
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 80/168 (47%), Gaps = 14/168 (8%)
Query: 58 PNIVRFKEVLL-----TPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVS 112
PNIV+ +++ TP+ ++ EY + F+ + ++ + R++ +L+ +
Sbjct: 87 PNIVKLLDIVRDQHSKTPS---LIFEYVNNTD-FKVLYPT--LTDYDIRYYIYELLKALD 140
Query: 113 YCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLT 172
YCHS I HRD+K N ++D ++++ D+G ++ + V + + PE+L
Sbjct: 141 YCHSQGIMHRDVKPHNVMIDHELR-KLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLV 199
Query: 173 K-KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSV 219
++YD + D+WS G M+ PF D + I ++L
Sbjct: 200 DLQDYDYSL-DMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 246
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 80/168 (47%), Gaps = 14/168 (8%)
Query: 58 PNIVRFKEVLL-----TPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVS 112
PNIV+ +++ TP+ ++ EY + F+ + ++ + R++ +L+ +
Sbjct: 88 PNIVKLLDIVRDQHSKTPS---LIFEYVNNTD-FKVLYPT--LTDYDIRYYIYELLKALD 141
Query: 113 YCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLT 172
YCHS I HRD+K N ++D ++++ D+G ++ + V + + PE+L
Sbjct: 142 YCHSQGIMHRDVKPHNVMIDHELR-KLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLV 200
Query: 173 K-KEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSV 219
++YD + D+WS G M+ PF D + I ++L
Sbjct: 201 DLQDYDYSL-DMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 247
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 90/217 (41%), Gaps = 33/217 (15%)
Query: 10 IGSGNFG--VAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSL-----KHPNIVR 62
IG GNFG + ++ R A+K ++ D+H R+ + HPNI+
Sbjct: 23 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH--RDFAGELEVLCKLGHHPNIIN 80
Query: 63 FKEVLLTPTHLAIVMEYAAGGELFE--------------RICN--AGRFSEDEARFFFQQ 106
+L + +EYA G L + I N A S + F
Sbjct: 81 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 140
Query: 107 LISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVG-TPA- 164
+ G+ Y Q HRDL N L+ + KI DFG S+ ++ K T+G P
Sbjct: 141 VARGMDYLSQKQFIHRDLAARNILVGENYV--AKIADFGLSRGQEVYV--KKTMGRLPVR 196
Query: 165 YIAPEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
++A E L Y +DVWS GV L+ ++ +G P+
Sbjct: 197 WMAIESLNYSVYTTN-SDVWSYGVLLWEIVSLGGTPY 232
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 131/355 (36%), Gaps = 75/355 (21%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKH----- 57
RY +++ +G G+F L D + +A+K ++ Q E EI + ++
Sbjct: 32 RYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKSAQHYTETALDEIKLLKCVRESDPSD 91
Query: 58 PN-------IVRFKEVLLTPTHLAIVMEYAAGGELFERI--CNAGRFSEDEARFFFQQLI 108
PN I FK + H+ +V E G L + I N + +Q++
Sbjct: 92 PNKDMVVQLIDDFKISGMNGIHVCMVFE-VLGHHLLKWIIKSNYQGLPVRCVKSIIRQVL 150
Query: 109 SGVSYCHS-MQICHRDLKLENTLL---DG-------------------------STAP-- 137
G+ Y HS +I H D+K EN L+ D STAP
Sbjct: 151 QGLDYLHSKCKIIHTDIKPENILMCVDDAYVRRMAAEATEWQKAGAPPPSGSAVSTAPAA 210
Query: 138 ---------------RVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKIAD 182
RVKI D G + +H + T Y + EVL Y AD
Sbjct: 211 DLLVNPLDPRNADKIRVKIADLG--NACWVHKHFTEDIQTRQYRSIEVLIGAGYSTP-AD 267
Query: 183 VWSCGVTLYVMLVGAYPFE--DPEDPKNFRKTIGRILSVHYSFPDYVRVSLECKHLLSRI 240
+WS + + G Y FE ED I I+ + S P + +S + SR
Sbjct: 268 IWSTACMAFELATGDYLFEPHSGEDYSRDEDHIAHIIELLGSIPRHFALSGK----YSRE 323
Query: 241 FVANSEKRITIPEIKNHPWFLRNLPIELTEGGSWQSHDVNNPSQSLEEVLSLIHE 295
F + I ++K PW L ++ L E W D + L +L ++ E
Sbjct: 324 FFNRRGELRHITKLK--PWSLFDV---LVEKYGWPHEDAAQFTDFLIPMLEMVPE 373
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 90/217 (41%), Gaps = 33/217 (15%)
Query: 10 IGSGNFG--VAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSL-----KHPNIVR 62
IG GNFG + ++ R A+K ++ D+H R+ + HPNI+
Sbjct: 33 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH--RDFAGELEVLCKLGHHPNIIN 90
Query: 63 FKEVLLTPTHLAIVMEYAAGGELFE--------------RICN--AGRFSEDEARFFFQQ 106
+L + +EYA G L + I N A S + F
Sbjct: 91 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 150
Query: 107 LISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVG-TPA- 164
+ G+ Y Q HRDL N L+ + KI DFG S+ ++ K T+G P
Sbjct: 151 VARGMDYLSQKQFIHRDLAARNILVGENYV--AKIADFGLSRGQEVYV--KKTMGRLPVR 206
Query: 165 YIAPEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
++A E L Y +DVWS GV L+ ++ +G P+
Sbjct: 207 WMAIESLNYSVYTTN-SDVWSYGVLLWEIVSLGGTPY 242
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 27/211 (12%)
Query: 7 VKDIGSGNFGVAKLVRDKWTRE------LLAVKFIE--RGQKIDEHVQREIMNHRSLKHP 58
+K +GSG FG + W E + +K IE G++ + V ++ SL H
Sbjct: 36 LKVLGSGVFGTVH--KGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHA 93
Query: 59 NIVRFKEVLLTP-THLAIVMEYAAGGELFERI-CNAGRFSEDEARFFFQQLISGVSYCHS 116
+IVR + L P + L +V +Y G L + + + G + Q+ G+ Y
Sbjct: 94 HIVRL--LGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEE 151
Query: 117 MQICHRDLKLENTLLDGSTAPRVKICDFGYSK------SSVLHSQPKSTVGTPAYIAPEV 170
+ HR+L N LL + +V++ DFG + +L+S+ K+ + ++A E
Sbjct: 152 HGMVHRNLAARNVLLKSPS--QVQVADFGVADLLPPDDKQLLYSEAKTPI---KWMALES 206
Query: 171 LTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
+ +Y + +DVWS GVT++ +M GA P+
Sbjct: 207 IHFGKYTHQ-SDVWSYGVTVWELMTFGAEPY 236
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 7 VKDIGSGNFGVAKLVRDKWTRE------LLAVKFIE--RGQKIDEHVQREIMNHRSLKHP 58
+K +GSG FG + W E + +K IE G++ + V ++ SL H
Sbjct: 18 LKVLGSGVFGTVH--KGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHA 75
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGELFERI-CNAGRFSEDEARFFFQQLISGVSYCHSM 117
+IVR L + L +V +Y G L + + + G + Q+ G+ Y
Sbjct: 76 HIVRLLG-LCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH 134
Query: 118 QICHRDLKLENTLLDGSTAPRVKICDFGYSK------SSVLHSQPKSTVGTPAYIAPEVL 171
+ HR+L N LL + +V++ DFG + +L+S+ K+ + ++A E +
Sbjct: 135 GMVHRNLAARNVLLKSPS--QVQVADFGVADLLPPDDKQLLYSEAKTPI---KWMALESI 189
Query: 172 TKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
+Y + +DVWS GVT++ +M GA P+
Sbjct: 190 HFGKYTHQ-SDVWSYGVTVWELMTFGAEPY 218
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 100/215 (46%), Gaps = 27/215 (12%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRE----LLAVKFIERGQKIDEHVQREIMNHR----SL 55
++ +K +GSG FG + + W E + V E + +EI++ S+
Sbjct: 20 FKKIKVLGSGAFGT--VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE--ARFFFQ---QLISG 110
+P++ R + LT T + ++M+ G L + + R +D +++ Q+ G
Sbjct: 78 DNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKG 132
Query: 111 VSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA---YIA 167
++Y ++ HRDL N L+ T VKI DFG +K + G ++A
Sbjct: 133 MNYLEDRRLVHRDLAARNVLV--KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 168 PEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPFE 201
E + + Y + +DVWS GVT++ +M G+ P++
Sbjct: 191 LESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYD 224
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 100/215 (46%), Gaps = 27/215 (12%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRE----LLAVKFIERGQKIDEHVQREIMNHR----SL 55
++ +K +GSG FG + + W E + V E + +EI++ S+
Sbjct: 21 FKKIKVLGSGAFGT--VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE--ARFFFQ---QLISG 110
+P++ R + LT T + ++M+ G L + + R +D +++ Q+ G
Sbjct: 79 DNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKG 133
Query: 111 VSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA---YIA 167
++Y ++ HRDL N L+ T VKI DFG +K + G ++A
Sbjct: 134 MNYLEDRRLVHRDLAARNVLV--KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 191
Query: 168 PEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPFE 201
E + + Y + +DVWS GVT++ +M G+ P++
Sbjct: 192 LESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYD 225
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 100/215 (46%), Gaps = 27/215 (12%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRE----LLAVKFIERGQKIDEHVQREIMNHR----SL 55
++ +K +GSG FG + + W E + V E + +EI++ S+
Sbjct: 19 FKKIKVLGSGAFGT--VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE--ARFFFQ---QLISG 110
+P++ R + LT T + ++M+ G L + + R +D +++ Q+ G
Sbjct: 77 DNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKG 131
Query: 111 VSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA---YIA 167
++Y ++ HRDL N L+ T VKI DFG +K + G ++A
Sbjct: 132 MNYLEDRRLVHRDLAARNVLV--KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 168 PEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPFE 201
E + + Y + +DVWS GVT++ +M G+ P++
Sbjct: 190 LESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYD 223
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 100/215 (46%), Gaps = 27/215 (12%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRE----LLAVKFIERGQKIDEHVQREIMNHR----SL 55
++ +K +GSG FG + + W E + V E + +EI++ S+
Sbjct: 17 FKKIKVLGSGAFGT--VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE--ARFFFQ---QLISG 110
+P++ R + LT T + ++M+ G L + + R +D +++ Q+ G
Sbjct: 75 DNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKG 129
Query: 111 VSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA---YIA 167
++Y ++ HRDL N L+ T VKI DFG +K + G ++A
Sbjct: 130 MNYLEDRRLVHRDLAARNVLV--KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 168 PEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPFE 201
E + + Y + +DVWS GVT++ +M G+ P++
Sbjct: 188 LESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYD 221
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 100/215 (46%), Gaps = 27/215 (12%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRE----LLAVKFIERGQKIDEHVQREIMNHR----SL 55
++ +K +GSG FG + + W E + V E + +EI++ S+
Sbjct: 18 FKKIKVLGSGAFGT--VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE--ARFFFQ---QLISG 110
+P++ R + LT T + ++M+ G L + + R +D +++ Q+ G
Sbjct: 76 DNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKG 130
Query: 111 VSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA---YIA 167
++Y ++ HRDL N L+ T VKI DFG +K + G ++A
Sbjct: 131 MNYLEDRRLVHRDLAARNVLV--KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 188
Query: 168 PEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPFE 201
E + + Y + +DVWS GVT++ +M G+ P++
Sbjct: 189 LESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYD 222
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 100/215 (46%), Gaps = 27/215 (12%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRE----LLAVKFIERGQKIDEHVQREIMNHR----SL 55
++ +K +GSG FG + + W E + V E + +EI++ S+
Sbjct: 19 FKKIKVLGSGAFGT--VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE--ARFFFQ---QLISG 110
+P++ R + LT T + ++M+ G L + + R +D +++ Q+ G
Sbjct: 77 DNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKG 131
Query: 111 VSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA---YIA 167
++Y ++ HRDL N L+ T VKI DFG +K + G ++A
Sbjct: 132 MNYLEDRRLVHRDLAARNVLV--KTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 168 PEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPFE 201
E + + Y + +DVWS GVT++ +M G+ P++
Sbjct: 190 LESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYD 223
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 100/215 (46%), Gaps = 27/215 (12%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRE----LLAVKFIERGQKIDEHVQREIMNHR----SL 55
++ +K +GSG FG + + W E + V E + +EI++ S+
Sbjct: 19 FKKIKVLGSGAFGT--VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE--ARFFFQ---QLISG 110
+P++ R + LT T + ++M+ G L + + R +D +++ Q+ G
Sbjct: 77 DNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKG 131
Query: 111 VSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA---YIA 167
++Y ++ HRDL N L+ T VKI DFG +K + G ++A
Sbjct: 132 MNYLEDRRLVHRDLAARNVLV--KTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 168 PEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPFE 201
E + + Y + +DVWS GVT++ +M G+ P++
Sbjct: 190 LESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYD 223
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 100/215 (46%), Gaps = 27/215 (12%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRE----LLAVKFIERGQKIDEHVQREIMNHR----SL 55
++ +K +GSG FG + + W E + V E + +EI++ S+
Sbjct: 21 FKKIKVLGSGAFGT--VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE--ARFFFQ---QLISG 110
+P++ R + LT T + ++M+ G L + + R +D +++ Q+ G
Sbjct: 79 DNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKG 133
Query: 111 VSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA---YIA 167
++Y ++ HRDL N L+ T VKI DFG +K + G ++A
Sbjct: 134 MNYLEDRRLVHRDLAARNVLV--KTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 191
Query: 168 PEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPFE 201
E + + Y + +DVWS GVT++ +M G+ P++
Sbjct: 192 LESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYD 225
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 23/165 (13%)
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFE----RICNAGRFSED-----EARFFFQQ 106
KH NI+ L +++ YA+ G L E R +S D E + F+
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 107 LIS-------GVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLHSQPKS 158
L+S G+ Y S + HRDL N L+ + +KI DFG ++ + + K+
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV--MKIADFGLARDINNIDYYKKT 216
Query: 159 TVG--TPAYIAPEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
T G ++APE L + Y + +DVWS GV ++ + +G P+
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQ-SDVWSFGVLMWEIFTLGGSPY 260
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 88/204 (43%), Gaps = 17/204 (8%)
Query: 10 IGSGNFGVAKLVRDKWTR-ELLAVKFI--ERGQKIDEHVQREIMNHRSLKHPNIVRFKEV 66
+G G FG K+ + + L+AVK + ER Q + Q E+ H N++R +
Sbjct: 46 LGRGGFG--KVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGF 103
Query: 67 LLTPTHLAIVMEYAAGGE----LFERICNAGRFSEDEARFFFQQLISGVSYCHSM---QI 119
+TPT +V Y A G L ER + + + G++Y H +I
Sbjct: 104 CMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKI 163
Query: 120 CHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQ--PKSTVGTPAYIAPEVLTKKEYD 177
HRD+K N LLD + DFG +K + GT +IAPE L+ +
Sbjct: 164 IHRDVKAANILLDEEF--EAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSS 221
Query: 178 GKIADVWSCGVTLYVMLVGAYPFE 201
K DV+ GV L ++ G F+
Sbjct: 222 EK-TDVFGYGVMLLELITGQRAFD 244
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Query: 110 GVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQP---KSTVGTPAYI 166
G+ Y H+ I HRD+K N LLD + P KI DFG SK Q GT YI
Sbjct: 151 GLHYLHTRAIIHRDVKSINILLDENFVP--KITDFGISKKGTELGQTHLXXVVKGTLGYI 208
Query: 167 APEVLTKKEYDGKIADVWSCGVTLYVML 194
PE K K +DV+S GV L+ +L
Sbjct: 209 DPEYFIKGRLTEK-SDVYSFGVVLFEVL 235
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Query: 110 GVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQP---KSTVGTPAYI 166
G+ Y H+ I HRD+K N LLD + P KI DFG SK Q GT YI
Sbjct: 151 GLHYLHTRAIIHRDVKSINILLDENFVP--KITDFGISKKGTELDQTHLXXVVKGTLGYI 208
Query: 167 APEVLTKKEYDGKIADVWSCGVTLYVML 194
PE K K +DV+S GV L+ +L
Sbjct: 209 DPEYFIKGRLTEK-SDVYSFGVVLFEVL 235
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 92/206 (44%), Gaps = 14/206 (6%)
Query: 2 ERYEIVKDIGSGNFGVAKLVRDKWTREL-LAVKFIERGQKIDEHVQREIMNHRSLKHPNI 60
E +++K +G+G FG ++ W +A+K ++ G E E + LKH +
Sbjct: 9 ESLQLIKRLGNGQFG--EVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKL 66
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGELFERICNA-GR-FSEDEARFFFQQLISGVSYCHSMQ 118
V+ V+ + + IV EY G L + + + GR Q+ +G++Y M
Sbjct: 67 VQLYAVV-SEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN 125
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTP---AYIAPEVLTKKE 175
HRDL+ N L+ KI DFG ++ + ++ + G + APE
Sbjct: 126 YIHRDLRSANILVGNGLI--CKIADFGLAR-LIEDNEXTARQGAKFPIKWTAPEAALYGR 182
Query: 176 YDGKIADVWSCGVTLYVMLV-GAYPF 200
+ K +DVWS G+ L ++ G P+
Sbjct: 183 FTIK-SDVWSFGILLTELVTKGRVPY 207
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 81/194 (41%), Gaps = 15/194 (7%)
Query: 8 KDIGSGNFG-VAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNH----RSLKHPNIVR 62
K++GSGNFG V K I + + D ++ E++ + L +P IVR
Sbjct: 31 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 90
Query: 63 FKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICHR 122
+ + + +VME A G L + + + Q+ G+ Y HR
Sbjct: 91 MIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 149
Query: 123 DLKLENTLLDGSTAPRVKICDFGYSKS-----SVLHSQPKSTVGTPAYIAPEVLTKKEYD 177
DL N LL T KI DFG SK+ + +Q Y APE + ++
Sbjct: 150 DLAARNVLL--VTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY-APECINYYKFS 206
Query: 178 GKIADVWSCGVTLY 191
K +DVWS GV ++
Sbjct: 207 SK-SDVWSFGVLMW 219
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 81/194 (41%), Gaps = 15/194 (7%)
Query: 8 KDIGSGNFG-VAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNH----RSLKHPNIVR 62
K++GSGNFG V K I + + D ++ E++ + L +P IVR
Sbjct: 33 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 92
Query: 63 FKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICHR 122
+ + + +VME A G L + + + Q+ G+ Y HR
Sbjct: 93 MIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 151
Query: 123 DLKLENTLLDGSTAPRVKICDFGYSKS-----SVLHSQPKSTVGTPAYIAPEVLTKKEYD 177
DL N LL T KI DFG SK+ + +Q Y APE + ++
Sbjct: 152 DLAARNVLL--VTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY-APECINYYKFS 208
Query: 178 GKIADVWSCGVTLY 191
K +DVWS GV ++
Sbjct: 209 SK-SDVWSFGVLMW 221
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 81/194 (41%), Gaps = 15/194 (7%)
Query: 8 KDIGSGNFG-VAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNH----RSLKHPNIVR 62
K++GSGNFG V K I + + D ++ E++ + L +P IVR
Sbjct: 33 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 92
Query: 63 FKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICHR 122
+ + + +VME A G L + + + Q+ G+ Y HR
Sbjct: 93 MIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 151
Query: 123 DLKLENTLLDGSTAPRVKICDFGYSKS-----SVLHSQPKSTVGTPAYIAPEVLTKKEYD 177
DL N LL T KI DFG SK+ + +Q Y APE + ++
Sbjct: 152 DLAARNVLL--VTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY-APECINYYKFS 208
Query: 178 GKIADVWSCGVTLY 191
K +DVWS GV ++
Sbjct: 209 SK-SDVWSFGVLMW 221
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 98/230 (42%), Gaps = 35/230 (15%)
Query: 1 MERYEIV--KDIGSGNFGVAKLV--------RDKWTRELLAVKFIERGQKIDEHVQREIM 50
++R +IV +++G G FG L +DK + A+K + D QRE
Sbjct: 12 IKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKD--FQREAE 69
Query: 51 NHRSLKHPNIVRFKEVLLTPTHLAIVMEYAAGGEL--FERICN--------------AGR 94
+L+H +IV+F V L +V EY G+L F R G
Sbjct: 70 LLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGE 129
Query: 95 FSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSK---SSV 151
+ Q+ SG+ Y S HRDL N L+ + VKI DFG S+ S+
Sbjct: 130 LGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLL--VKIGDFGMSRDVYSTD 187
Query: 152 LHSQPKSTVGTPAYIAPEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
+ T+ ++ PE + +++ + +DVWS GV L+ + G P+
Sbjct: 188 YYRVGGHTMLPIRWMPPESIMYRKFTTE-SDVWSFGVILWEIFTYGKQPW 236
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 81/194 (41%), Gaps = 15/194 (7%)
Query: 8 KDIGSGNFG-VAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNH----RSLKHPNIVR 62
K++GSGNFG V K I + + D ++ E++ + L +P IVR
Sbjct: 17 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 76
Query: 63 FKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICHR 122
+ + + +VME A G L + + + Q+ G+ Y HR
Sbjct: 77 MIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 135
Query: 123 DLKLENTLLDGSTAPRVKICDFGYSKS-----SVLHSQPKSTVGTPAYIAPEVLTKKEYD 177
DL N LL T KI DFG SK+ + +Q Y APE + ++
Sbjct: 136 DLAARNVLL--VTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY-APECINYYKFS 192
Query: 178 GKIADVWSCGVTLY 191
K +DVWS GV ++
Sbjct: 193 SK-SDVWSFGVLMW 205
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 100/230 (43%), Gaps = 35/230 (15%)
Query: 2 ERYEIVKDIGSGNFGVAKLV------RDKWTR-ELLAVKFIERG---QKIDEHVQREIMN 51
+R + K +G G FG L +DK R +AVK ++ + + + + M
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 52 HRSLKHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGR-----FSEDEARFFFQQ 106
KH NI+ L +++EYA+ G L E + A R FS + + +Q
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL-QARRPPGLEFSFNPSHNPEEQ 146
Query: 107 LIS------------GVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLH 153
L S G+ Y S + HRDL N L+ +KI DFG ++ +
Sbjct: 147 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV--MKIADFGLARDIHHID 204
Query: 154 SQPKSTVG--TPAYIAPEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
K+T G ++APE L + Y + +DVWS GV L+ + +G P+
Sbjct: 205 XXKKTTNGRLPVKWMAPEALFDRIYTHQ-SDVWSFGVLLWEIFTLGGSPY 253
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 81/194 (41%), Gaps = 15/194 (7%)
Query: 8 KDIGSGNFG-VAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNH----RSLKHPNIVR 62
K++GSGNFG V K I + + D ++ E++ + L +P IVR
Sbjct: 17 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 76
Query: 63 FKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICHR 122
+ + + +VME A G L + + + Q+ G+ Y HR
Sbjct: 77 MIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 135
Query: 123 DLKLENTLLDGSTAPRVKICDFGYSKS-----SVLHSQPKSTVGTPAYIAPEVLTKKEYD 177
DL N LL T KI DFG SK+ + +Q Y APE + ++
Sbjct: 136 DLAARNVLL--VTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWY-APECINYYKFS 192
Query: 178 GKIADVWSCGVTLY 191
K +DVWS GV ++
Sbjct: 193 SK-SDVWSFGVLMW 205
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 81/194 (41%), Gaps = 15/194 (7%)
Query: 8 KDIGSGNFG-VAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNH----RSLKHPNIVR 62
K++GSGNFG V K I + + D ++ E++ + L +P IVR
Sbjct: 23 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 82
Query: 63 FKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICHR 122
+ + + +VME A G L + + + Q+ G+ Y HR
Sbjct: 83 MIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 141
Query: 123 DLKLENTLLDGSTAPRVKICDFGYSKS-----SVLHSQPKSTVGTPAYIAPEVLTKKEYD 177
DL N LL T KI DFG SK+ + +Q Y APE + ++
Sbjct: 142 DLAARNVLL--VTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY-APECINYYKFS 198
Query: 178 GKIADVWSCGVTLY 191
K +DVWS GV ++
Sbjct: 199 SK-SDVWSFGVLMW 211
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 23/165 (13%)
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFE----RICNAGRFSED-----EARFFFQQ 106
KH NI+ L +++ YA+ G L E R +S D E + F+
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 107 LIS-------GVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLHSQPKS 158
L+S G+ Y S + HRDL N L+ + +KI DFG ++ + + K+
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV--MKIADFGLARDINNIDYYKKT 216
Query: 159 TVG--TPAYIAPEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
T G ++APE L + Y + +DVWS GV ++ + +G P+
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQ-SDVWSFGVLMWEIFTLGGSPY 260
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 81/194 (41%), Gaps = 15/194 (7%)
Query: 8 KDIGSGNFG-VAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNH----RSLKHPNIVR 62
K++GSGNFG V K I + + D ++ E++ + L +P IVR
Sbjct: 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 72
Query: 63 FKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICHR 122
+ + + +VME A G L + + + Q+ G+ Y HR
Sbjct: 73 MIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 131
Query: 123 DLKLENTLLDGSTAPRVKICDFGYSKS-----SVLHSQPKSTVGTPAYIAPEVLTKKEYD 177
DL N LL T KI DFG SK+ + +Q Y APE + ++
Sbjct: 132 DLAARNVLL--VTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY-APECINYYKFS 188
Query: 178 GKIADVWSCGVTLY 191
K +DVWS GV ++
Sbjct: 189 SK-SDVWSFGVLMW 201
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 90/217 (41%), Gaps = 33/217 (15%)
Query: 10 IGSGNFG--VAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSL-----KHPNIVR 62
IG GNFG + ++ R A+K ++ D+H R+ + HPNI+
Sbjct: 30 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH--RDFAGELEVLCKLGHHPNIIN 87
Query: 63 FKEVLLTPTHLAIVMEYAAGGELFE--------------RICN--AGRFSEDEARFFFQQ 106
+L + +EYA G L + I N A S + F
Sbjct: 88 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 147
Query: 107 LISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVG-TPA- 164
+ G+ Y Q HR+L N L+ + KI DFG S+ ++ K T+G P
Sbjct: 148 VARGMDYLSQKQFIHRNLAARNILVGENYV--AKIADFGLSRGQEVYV--KKTMGRLPVR 203
Query: 165 YIAPEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
++A E L Y +DVWS GV L+ ++ +G P+
Sbjct: 204 WMAIESLNYSVYTTN-SDVWSYGVLLWEIVSLGGTPY 239
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 100/213 (46%), Gaps = 14/213 (6%)
Query: 2 ERYEIVKDIGSGNFG-VAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNI 60
E ++V+ +G+G FG V + T+ +AVK +++G + E + L+H +
Sbjct: 22 ETLKLVERLGAGQFGEVWMGYYNGHTK--VAVKSLKQGSMSPDAFLAEANLMKQLQHQRL 79
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGEL--FERICNAGRFSEDEARFFFQQLISGVSYCHSMQ 118
VR V+ T + I+ EY G L F + + + + ++ Q+ G+++
Sbjct: 80 VRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 138
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTP---AYIAPEVLTKKE 175
HRDL+ N L+ + + KI DFG ++ + ++ + G + APE +
Sbjct: 139 YIHRDLRAANILVSDTLS--CKIADFGLAR-LIEDNEXTAREGAKFPIKWTAPEAINYGT 195
Query: 176 YDGKIADVWSCGVTLYVMLV-GAYPFEDPEDPK 207
+ K +DVWS G+ L ++ G P+ +P+
Sbjct: 196 FTIK-SDVWSFGILLTEIVTHGRIPYPGMTNPE 227
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 100/215 (46%), Gaps = 27/215 (12%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRE----LLAVKFIERGQKIDEHVQREIMNHR----SL 55
++ +K +GSG FG + + W E + V +E + +EI++ S+
Sbjct: 51 FKKIKVLGSGAFGT--VYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASV 108
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE--ARFFFQ---QLISG 110
+P++ R + LT T + ++ + G L + + R +D +++ Q+ G
Sbjct: 109 DNPHVCRLLGICLTST-VQLITQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKG 163
Query: 111 VSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA---YIA 167
++Y ++ HRDL N L+ T VKI DFG +K + G ++A
Sbjct: 164 MNYLEDRRLVHRDLAARNVLV--KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 221
Query: 168 PEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPFE 201
E + + Y + +DVWS GVT++ +M G+ P++
Sbjct: 222 LESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYD 255
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 100/213 (46%), Gaps = 14/213 (6%)
Query: 2 ERYEIVKDIGSGNFG-VAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNI 60
E ++V+ +G+G FG V + T+ +AVK +++G + E + L+H +
Sbjct: 15 ETLKLVERLGAGQFGEVWMGYYNGHTK--VAVKSLKQGSMSPDAFLAEANLMKQLQHQRL 72
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGEL--FERICNAGRFSEDEARFFFQQLISGVSYCHSMQ 118
VR V+ T + I+ EY G L F + + + + ++ Q+ G+++
Sbjct: 73 VRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 131
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTP---AYIAPEVLTKKE 175
HRDL+ N L+ + + KI DFG ++ + ++ + G + APE +
Sbjct: 132 YIHRDLRAANILVSDTLS--CKIADFGLAR-LIEDNEXTAREGAKFPIKWTAPEAINYGT 188
Query: 176 YDGKIADVWSCGVTLYVMLV-GAYPFEDPEDPK 207
+ K +DVWS G+ L ++ G P+ +P+
Sbjct: 189 FTIK-SDVWSFGILLTEIVTHGRIPYPGMTNPE 220
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 95/215 (44%), Gaps = 24/215 (11%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKH----PN 59
+ + K IG GNFG +L ++ +T E +A+K +E + + E ++ L P
Sbjct: 11 FRVGKKIGCGNFGELRLGKNLYTNEYVAIK-LEPMKSRAPQLHLEYRFYKQLGSGDGIPQ 69
Query: 60 IVRFKEVLLTPTHLAIVMEYAAGG--ELFERICNAGRFSEDEARFFFQQLISGVSYCHSM 117
+ F + A+V+E +LF+ +C+ FS QLIS + Y HS
Sbjct: 70 VYYFGPC---GKYNAMVLELLGPSLEDLFD-LCDR-TFSLKTVLMIAIQLISRMEYVHSK 124
Query: 118 QICHRDLKLENTLL---DGSTAPRVKICDFGY--------SKSSVLHSQPKSTVGTPAYI 166
+ +RD+K EN L+ T + I DFG +K + + + KS GT Y+
Sbjct: 125 NLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYM 184
Query: 167 APEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFE 201
+ KE + D+ + G L G+ P++
Sbjct: 185 SINTHLGKE-QSRRDDLEALGHMFMYFLRGSLPWQ 218
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 81/194 (41%), Gaps = 15/194 (7%)
Query: 8 KDIGSGNFG-VAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNH----RSLKHPNIVR 62
K++GSGNFG V K I + + D ++ E++ + L +P IVR
Sbjct: 11 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 70
Query: 63 FKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICHR 122
+ + + +VME A G L + + + Q+ G+ Y HR
Sbjct: 71 MIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 129
Query: 123 DLKLENTLLDGSTAPRVKICDFGYSKS-----SVLHSQPKSTVGTPAYIAPEVLTKKEYD 177
DL N LL T KI DFG SK+ + +Q Y APE + ++
Sbjct: 130 DLAARNVLL--VTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY-APECINYYKFS 186
Query: 178 GKIADVWSCGVTLY 191
K +DVWS GV ++
Sbjct: 187 SK-SDVWSFGVLMW 199
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 100/213 (46%), Gaps = 14/213 (6%)
Query: 2 ERYEIVKDIGSGNFG-VAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNI 60
E ++V+ +G+G FG V + T+ +AVK +++G + E + L+H +
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNGHTK--VAVKSLKQGSMSPDAFLAEANLMKQLQHQRL 70
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGEL--FERICNAGRFSEDEARFFFQQLISGVSYCHSMQ 118
VR V+ T + I+ EY G L F + + + + ++ Q+ G+++
Sbjct: 71 VRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 129
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTP---AYIAPEVLTKKE 175
HRDL+ N L+ + + KI DFG ++ + ++ + G + APE +
Sbjct: 130 YIHRDLRAANILVSDTLS--CKIADFGLAR-LIEDNEXTAREGAKFPIKWTAPEAINYGT 186
Query: 176 YDGKIADVWSCGVTLYVMLV-GAYPFEDPEDPK 207
+ K +DVWS G+ L ++ G P+ +P+
Sbjct: 187 FTIK-SDVWSFGILLTEIVTHGRIPYPGMTNPE 218
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 100/213 (46%), Gaps = 14/213 (6%)
Query: 2 ERYEIVKDIGSGNFG-VAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNI 60
E ++V+ +G+G FG V + T+ +AVK +++G + E + L+H +
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNGHTK--VAVKSLKQGSMSPDAFLAEANLMKQLQHQRL 70
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGEL--FERICNAGRFSEDEARFFFQQLISGVSYCHSMQ 118
VR V+ T + I+ EY G L F + + + + ++ Q+ G+++
Sbjct: 71 VRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 129
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTP---AYIAPEVLTKKE 175
HRDL+ N L+ + + KI DFG ++ + ++ + G + APE +
Sbjct: 130 YIHRDLRAANILVSDTLS--CKIADFGLAR-LIEDNEXTAREGAKFPIKWTAPEAINYGT 186
Query: 176 YDGKIADVWSCGVTLYVMLV-GAYPFEDPEDPK 207
+ K +DVWS G+ L ++ G P+ +P+
Sbjct: 187 FTIK-SDVWSFGILLTEIVTHGRIPYPGMTNPE 218
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 100/213 (46%), Gaps = 14/213 (6%)
Query: 2 ERYEIVKDIGSGNFG-VAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNI 60
E ++V+ +G+G FG V + T+ +AVK +++G + E + L+H +
Sbjct: 14 ETLKLVERLGAGQFGEVWMGYYNGHTK--VAVKSLKQGSMSPDAFLAEANLMKQLQHQRL 71
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGEL--FERICNAGRFSEDEARFFFQQLISGVSYCHSMQ 118
VR V+ T + I+ EY G L F + + + + ++ Q+ G+++
Sbjct: 72 VRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 130
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTP---AYIAPEVLTKKE 175
HRDL+ N L+ + + KI DFG ++ + ++ + G + APE +
Sbjct: 131 YIHRDLRAANILVSDTLS--CKIADFGLAR-LIEDNEXTAREGAKFPIKWTAPEAINYGT 187
Query: 176 YDGKIADVWSCGVTLYVMLV-GAYPFEDPEDPK 207
+ K +DVWS G+ L ++ G P+ +P+
Sbjct: 188 FTIK-SDVWSFGILLTEIVTHGRIPYPGMTNPE 219
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 100/213 (46%), Gaps = 14/213 (6%)
Query: 2 ERYEIVKDIGSGNFG-VAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNI 60
E ++V+ +G+G FG V + T+ +AVK +++G + E + L+H +
Sbjct: 21 ETLKLVERLGAGQFGEVWMGYYNGHTK--VAVKSLKQGSMSPDAFLAEANLMKQLQHQRL 78
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGEL--FERICNAGRFSEDEARFFFQQLISGVSYCHSMQ 118
VR V+ T + I+ EY G L F + + + + ++ Q+ G+++
Sbjct: 79 VRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 137
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTP---AYIAPEVLTKKE 175
HRDL+ N L+ + + KI DFG ++ + ++ + G + APE +
Sbjct: 138 YIHRDLRAANILVSDTLS--CKIADFGLAR-LIEDNEXTAREGAKFPIKWTAPEAINYGT 194
Query: 176 YDGKIADVWSCGVTLYVMLV-GAYPFEDPEDPK 207
+ K +DVWS G+ L ++ G P+ +P+
Sbjct: 195 FTIK-SDVWSFGILLTEIVTHGRIPYPGMTNPE 226
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 100/213 (46%), Gaps = 14/213 (6%)
Query: 2 ERYEIVKDIGSGNFG-VAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNI 60
E ++V+ +G+G FG V + T+ +AVK +++G + E + L+H +
Sbjct: 19 ETLKLVERLGAGQFGEVWMGYYNGHTK--VAVKSLKQGSMSPDAFLAEANLMKQLQHQRL 76
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGEL--FERICNAGRFSEDEARFFFQQLISGVSYCHSMQ 118
VR V+ T + I+ EY G L F + + + + ++ Q+ G+++
Sbjct: 77 VRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 135
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTP---AYIAPEVLTKKE 175
HRDL+ N L+ + + KI DFG ++ + ++ + G + APE +
Sbjct: 136 YIHRDLRAANILVSDTLS--CKIADFGLAR-LIEDNEXTAREGAKFPIKWTAPEAINYGT 192
Query: 176 YDGKIADVWSCGVTLYVMLV-GAYPFEDPEDPK 207
+ K +DVWS G+ L ++ G P+ +P+
Sbjct: 193 FTIK-SDVWSFGILLTEIVTHGRIPYPGMTNPE 224
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 81/194 (41%), Gaps = 15/194 (7%)
Query: 8 KDIGSGNFG-VAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNH----RSLKHPNIVR 62
K++GSGNFG V K I + + D ++ E++ + L +P IVR
Sbjct: 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 434
Query: 63 FKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICHR 122
+ + + +VME A G L + + + Q+ G+ Y HR
Sbjct: 435 MIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 493
Query: 123 DLKLENTLLDGSTAPRVKICDFGYSKS-----SVLHSQPKSTVGTPAYIAPEVLTKKEYD 177
DL N LL T KI DFG SK+ + +Q Y APE + ++
Sbjct: 494 DLAARNVLL--VTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY-APECINYYKFS 550
Query: 178 GKIADVWSCGVTLY 191
K +DVWS GV ++
Sbjct: 551 SK-SDVWSFGVLMW 563
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 98/212 (46%), Gaps = 12/212 (5%)
Query: 2 ERYEIVKDIGSGNFG-VAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNI 60
E ++V+ +G+G FG V + T+ +AVK +++G + E + L+H +
Sbjct: 8 ETLKLVERLGAGQFGEVWMGYYNGHTK--VAVKSLKQGSMSPDAFLAEANLMKQLQHQRL 65
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGEL--FERICNAGRFSEDEARFFFQQLISGVSYCHSMQ 118
VR V+ T + I+ EY G L F + + + + ++ Q+ G+++
Sbjct: 66 VRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 124
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSK--SSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
HRDL+ N L+ + + KI DFG ++ ++ + + APE + +
Sbjct: 125 YIHRDLRAANILVSDTLS--CKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTF 182
Query: 177 DGKIADVWSCGVTLYVMLV-GAYPFEDPEDPK 207
K +DVWS G+ L ++ G P+ +P+
Sbjct: 183 TIK-SDVWSFGILLTEIVTHGRIPYPGMTNPE 213
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 99/215 (46%), Gaps = 27/215 (12%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRE----LLAVKFIERGQKIDEHVQREIMNHR----SL 55
++ +K +GSG FG + + W E + V E + +EI++ S+
Sbjct: 17 FKKIKVLGSGAFGT--VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE--ARFFFQ---QLISG 110
+P++ R + LT T + ++ + G L + + R +D +++ Q+ G
Sbjct: 75 DNPHVCRLLGICLTST-VQLITQLMPFGXLLDYV----REHKDNIGSQYLLNWCVQIAKG 129
Query: 111 VSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA---YIA 167
++Y ++ HRDL N L+ T VKI DFG +K + G ++A
Sbjct: 130 MNYLEDRRLVHRDLAARNVLV--KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 168 PEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPFE 201
E + + Y + +DVWS GVT++ +M G+ P++
Sbjct: 188 LESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYD 221
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 81/194 (41%), Gaps = 15/194 (7%)
Query: 8 KDIGSGNFG-VAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNH----RSLKHPNIVR 62
K++GSGNFG V K I + + D ++ E++ + L +P IVR
Sbjct: 376 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 435
Query: 63 FKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICHR 122
+ + + +VME A G L + + + Q+ G+ Y HR
Sbjct: 436 MIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 494
Query: 123 DLKLENTLLDGSTAPRVKICDFGYSKS-----SVLHSQPKSTVGTPAYIAPEVLTKKEYD 177
DL N LL T KI DFG SK+ + +Q Y APE + ++
Sbjct: 495 DLAARNVLL--VTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY-APECINYYKFS 551
Query: 178 GKIADVWSCGVTLY 191
K +DVWS GV ++
Sbjct: 552 SK-SDVWSFGVLMW 564
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 101/241 (41%), Gaps = 51/241 (21%)
Query: 6 IVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRFKE 65
+V+ +G G +G ++ R W E +AVK + + EI N L+H NI+ F
Sbjct: 12 LVECVGKGRYG--EVWRGLWHGESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNILGFIA 69
Query: 66 VLLT----PTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLIS---GVSYCH--- 115
+T T L ++ Y G L++ + + E + +S G+++ H
Sbjct: 70 SDMTSRNSSTQLWLITHYHEHGSLYDFL----QRQTLEPHLALRLAVSAACGLAHLHVEI 125
Query: 116 -----SMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKS--------TVGT 162
I HRD K N L+ + + I D G +V+HSQ VGT
Sbjct: 126 FGTQGKPAIAHRDFKSRNVLVKSNL--QCCIADLGL---AVMHSQGSDYLDIGNNPRVGT 180
Query: 163 PAYIAPEVLTKKEYDG-----KIADVWSCGVTLYVM--------LVGAY--PFED--PED 205
Y+APEVL ++ K D+W+ G+ L+ + +V Y PF D P D
Sbjct: 181 KRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEIARRTIVNGIVEDYRPPFYDVVPND 240
Query: 206 P 206
P
Sbjct: 241 P 241
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 98/212 (46%), Gaps = 12/212 (5%)
Query: 2 ERYEIVKDIGSGNFG-VAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNI 60
E ++V+ +G+G FG V + T+ +AVK +++G + E + L+H +
Sbjct: 19 ETLKLVERLGAGQFGEVWMGYYNGHTK--VAVKSLKQGSMSPDAFLAEANLMKQLQHQRL 76
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGEL--FERICNAGRFSEDEARFFFQQLISGVSYCHSMQ 118
VR V+ T + I+ EY G L F + + + + ++ Q+ G+++
Sbjct: 77 VRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 135
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSK--SSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
HRDL+ N L+ + + KI DFG ++ ++ + + APE + +
Sbjct: 136 YIHRDLRAANILVSDTLS--CKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTF 193
Query: 177 DGKIADVWSCGVTLYVMLV-GAYPFEDPEDPK 207
K +DVWS G+ L ++ G P+ +P+
Sbjct: 194 TIK-SDVWSFGILLTEIVTHGRIPYPGMTNPE 224
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 98/212 (46%), Gaps = 12/212 (5%)
Query: 2 ERYEIVKDIGSGNFG-VAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNI 60
E ++V+ +G+G FG V + T+ +AVK +++G + E + L+H +
Sbjct: 18 ETLKLVERLGAGQFGEVWMGYYNGHTK--VAVKSLKQGSMSPDAFLAEANLMKQLQHQRL 75
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGEL--FERICNAGRFSEDEARFFFQQLISGVSYCHSMQ 118
VR V+ T + I+ EY G L F + + + + ++ Q+ G+++
Sbjct: 76 VRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 134
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSK--SSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
HRDL+ N L+ + + KI DFG ++ ++ + + APE + +
Sbjct: 135 YIHRDLRAANILVSDTLS--CKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTF 192
Query: 177 DGKIADVWSCGVTLYVMLV-GAYPFEDPEDPK 207
K +DVWS G+ L ++ G P+ +P+
Sbjct: 193 TIK-SDVWSFGILLTEIVTHGRIPYPGMTNPE 223
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 99/227 (43%), Gaps = 30/227 (13%)
Query: 1 MERYEIVK--DIGSGNFGVAKLVR-----DKWTRELLAVKFI-ERGQKIDEHVQREIMNH 52
++R +IV ++G G FG L + + L+AVK + E + + QRE
Sbjct: 38 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELL 97
Query: 53 RSLKHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAG------RFSEDEA------ 100
L+H +IVRF V L +V EY G+L + + G ED A
Sbjct: 98 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 157
Query: 101 ---RFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSK---SSVLHS 154
Q+ +G+ Y + HRDL N L+ VKI DFG S+ S+ +
Sbjct: 158 GQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLV--VKIGDFGMSRDIYSTDYYR 215
Query: 155 QPKSTVGTPAYIAPEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
T+ ++ PE + +++ + +DVWS GV L+ + G P+
Sbjct: 216 VGGRTMLPIRWMPPESILYRKFTTE-SDVWSFGVVLWEIFTYGKQPW 261
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 99/227 (43%), Gaps = 30/227 (13%)
Query: 1 MERYEIVK--DIGSGNFGVAKLVR-----DKWTRELLAVKFI-ERGQKIDEHVQREIMNH 52
++R +IV ++G G FG L + + L+AVK + E + + QRE
Sbjct: 15 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELL 74
Query: 53 RSLKHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAG------RFSEDEA------ 100
L+H +IVRF V L +V EY G+L + + G ED A
Sbjct: 75 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 134
Query: 101 ---RFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSK---SSVLHS 154
Q+ +G+ Y + HRDL N L+ VKI DFG S+ S+ +
Sbjct: 135 GQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLV--VKIGDFGMSRDIYSTDYYR 192
Query: 155 QPKSTVGTPAYIAPEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
T+ ++ PE + +++ + +DVWS GV L+ + G P+
Sbjct: 193 VGGRTMLPIRWMPPESILYRKFTTE-SDVWSFGVVLWEIFTYGKQPW 238
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 98/212 (46%), Gaps = 12/212 (5%)
Query: 2 ERYEIVKDIGSGNFG-VAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNI 60
E ++V+ +G+G FG V + T+ +AVK +++G + E + L+H +
Sbjct: 23 ETLKLVERLGAGQFGEVWMGYYNGHTK--VAVKSLKQGSMSPDAFLAEANLMKQLQHQRL 80
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGEL--FERICNAGRFSEDEARFFFQQLISGVSYCHSMQ 118
VR V+ T + I+ EY G L F + + + + ++ Q+ G+++
Sbjct: 81 VRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 139
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSK--SSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
HRDL+ N L+ + + KI DFG ++ ++ + + APE + +
Sbjct: 140 YIHRDLRAANILVSDTLS--CKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTF 197
Query: 177 DGKIADVWSCGVTLYVMLV-GAYPFEDPEDPK 207
K +DVWS G+ L ++ G P+ +P+
Sbjct: 198 TIK-SDVWSFGILLTEIVTHGRIPYPGMTNPE 228
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 98/212 (46%), Gaps = 12/212 (5%)
Query: 2 ERYEIVKDIGSGNFG-VAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNI 60
E ++V+ +G+G FG V + T+ +AVK +++G + E + L+H +
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNGHTK--VAVKSLKQGSMSPDAFLAEANLMKQLQHQRL 70
Query: 61 VRFKEVLLTPTHLAIVMEYAAGGEL--FERICNAGRFSEDEARFFFQQLISGVSYCHSMQ 118
VR V+ T + I+ EY G L F + + + + ++ Q+ G+++
Sbjct: 71 VRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 129
Query: 119 ICHRDLKLENTLLDGSTAPRVKICDFGYSK--SSVLHSQPKSTVGTPAYIAPEVLTKKEY 176
HRDL+ N L+ + + KI DFG ++ ++ + + APE + +
Sbjct: 130 YIHRDLRAANILVSDTLS--CKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTF 187
Query: 177 DGKIADVWSCGVTLYVMLV-GAYPFEDPEDPK 207
K +DVWS G+ L ++ G P+ +P+
Sbjct: 188 TIK-SDVWSFGILLTEIVTHGRIPYPGMTNPE 218
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 76/196 (38%), Gaps = 17/196 (8%)
Query: 18 AKLVRDKWTRELLAVKFI---ERGQKIDEHVQREIMNHRSLKHPNIVRFKEVLLTPT--H 72
+L + +W + VK + + + E R HPN++ +P H
Sbjct: 24 GELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPH 83
Query: 73 LAIVMEYAAGGELFERICNAGRFSEDEARF--FFQQLISGVSYCHSMQ--ICHRDLKLEN 128
++ + G L+ + F D+++ F G ++ H+++ I L +
Sbjct: 84 PTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLHTLEPLIPRHALNSRS 143
Query: 129 TLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDG--KIADVWSC 186
+D R+ D +S Q PA++APE L KK D + AD WS
Sbjct: 144 VXIDEDXTARISXADVKFS------FQSPGRXYAPAWVAPEALQKKPEDTNRRSADXWSF 197
Query: 187 GVTLYVMLVGAYPFED 202
V L+ ++ PF D
Sbjct: 198 AVLLWELVTREVPFAD 213
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 99/227 (43%), Gaps = 30/227 (13%)
Query: 1 MERYEIVK--DIGSGNFGVAKLVR-----DKWTRELLAVKFI-ERGQKIDEHVQREIMNH 52
++R +IV ++G G FG L + + L+AVK + E + + QRE
Sbjct: 9 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELL 68
Query: 53 RSLKHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAG------RFSEDEA------ 100
L+H +IVRF V L +V EY G+L + + G ED A
Sbjct: 69 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 128
Query: 101 ---RFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSK---SSVLHS 154
Q+ +G+ Y + HRDL N L+ VKI DFG S+ S+ +
Sbjct: 129 GQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLV--VKIGDFGMSRDIYSTDYYR 186
Query: 155 QPKSTVGTPAYIAPEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
T+ ++ PE + +++ + +DVWS GV L+ + G P+
Sbjct: 187 VGGRTMLPIRWMPPESILYRKFTTE-SDVWSFGVVLWEIFTYGKQPW 232
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 99/215 (46%), Gaps = 27/215 (12%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRE----LLAVKFIERGQKIDEHVQREIMNHR----SL 55
++ +K +GSG FG + + W E + V E + +EI++ S+
Sbjct: 23 FKKIKVLGSGAFGT--VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 80
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE--ARFFFQ---QLISG 110
+P++ R + LT T + ++ + G L + + R +D +++ Q+ G
Sbjct: 81 DNPHVCRLLGICLTST-VQLITQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKG 135
Query: 111 VSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA---YIA 167
++Y ++ HRDL N L+ T VKI DFG +K + G ++A
Sbjct: 136 MNYLEDRRLVHRDLAARNVLV--KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 193
Query: 168 PEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPFE 201
E + + Y + +DVWS GVT++ +M G+ P++
Sbjct: 194 LESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYD 227
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 99/215 (46%), Gaps = 27/215 (12%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRE----LLAVKFIERGQKIDEHVQREIMNHR----SL 55
++ +K +GSG FG + + W E + V E + +EI++ S+
Sbjct: 20 FKKIKVLGSGAFGT--VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE--ARFFFQ---QLISG 110
+P++ R + LT T + ++ + G L + + R +D +++ Q+ G
Sbjct: 78 DNPHVCRLLGICLTST-VQLITQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKG 132
Query: 111 VSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA---YIA 167
++Y ++ HRDL N L+ T VKI DFG +K + G ++A
Sbjct: 133 MNYLEDRRLVHRDLAARNVLV--KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 168 PEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPFE 201
E + + Y + +DVWS GVT++ +M G+ P++
Sbjct: 191 LESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYD 224
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 99/215 (46%), Gaps = 27/215 (12%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRE----LLAVKFIERGQKIDEHVQREIMNHR----SL 55
++ +K +GSG FG + + W E + V E + +EI++ S+
Sbjct: 20 FKKIKVLGSGAFGT--VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE--ARFFFQ---QLISG 110
+P++ R + LT T + ++ + G L + + R +D +++ Q+ G
Sbjct: 78 DNPHVCRLLGICLTST-VQLITQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKG 132
Query: 111 VSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA---YIA 167
++Y ++ HRDL N L+ T VKI DFG +K + G ++A
Sbjct: 133 MNYLEDRRLVHRDLAARNVLV--KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 168 PEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPFE 201
E + + Y + +DVWS GVT++ +M G+ P++
Sbjct: 191 LESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYD 224
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 99/215 (46%), Gaps = 27/215 (12%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRE----LLAVKFIERGQKIDEHVQREIMNHR----SL 55
++ +K + SG FG + + W E + V E + +EI++ S+
Sbjct: 24 FKKIKVLSSGAFGT--VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE--ARFFFQ---QLISG 110
+P++ R + LT T + ++M+ G L + + R +D +++ Q+ G
Sbjct: 82 DNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKG 136
Query: 111 VSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA---YIA 167
++Y ++ HRDL N L+ T VKI DFG +K + G ++A
Sbjct: 137 MNYLEDRRLVHRDLAARNVLV--KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 194
Query: 168 PEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPFE 201
E + + Y + +DVWS GVT++ +M G+ P++
Sbjct: 195 LESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYD 228
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 99/215 (46%), Gaps = 27/215 (12%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRE----LLAVKFIERGQKIDEHVQREIMNHR----SL 55
++ +K +GSG FG + + W E + V E + +EI++ S+
Sbjct: 19 FKKIKVLGSGAFGT--VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE--ARFFFQ---QLISG 110
+P++ R + LT T + ++ + G L + + R +D +++ Q+ G
Sbjct: 77 DNPHVCRLLGICLTST-VQLITQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKG 131
Query: 111 VSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA---YIA 167
++Y ++ HRDL N L+ T VKI DFG +K + G ++A
Sbjct: 132 MNYLEDRRLVHRDLAARNVLV--KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 168 PEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPFE 201
E + + Y + +DVWS GVT++ +M G+ P++
Sbjct: 190 LESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYD 223
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 99/215 (46%), Gaps = 27/215 (12%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRE----LLAVKFIERGQKIDEHVQREIMNHR----SL 55
++ +K +GSG FG + + W E + V E + +EI++ S+
Sbjct: 20 FKKIKVLGSGAFGT--VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE--ARFFFQ---QLISG 110
+P++ R + LT T + ++ + G L + + R +D +++ Q+ G
Sbjct: 78 DNPHVCRLLGICLTST-VQLITQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKG 132
Query: 111 VSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA---YIA 167
++Y ++ HRDL N L+ T VKI DFG +K + G ++A
Sbjct: 133 MNYLEDRRLVHRDLAARNVLV--KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 168 PEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPFE 201
E + + Y + +DVWS GVT++ +M G+ P++
Sbjct: 191 LESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYD 224
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 99/215 (46%), Gaps = 27/215 (12%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRE----LLAVKFIERGQKIDEHVQREIMNHR----SL 55
++ +K +GSG FG + + W E + V E + +EI++ S+
Sbjct: 24 FKKIKVLGSGAFGT--VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE--ARFFFQ---QLISG 110
+P++ R + LT T + ++ + G L + + R +D +++ Q+ G
Sbjct: 82 DNPHVCRLLGICLTST-VQLITQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKG 136
Query: 111 VSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA---YIA 167
++Y ++ HRDL N L+ T VKI DFG +K + G ++A
Sbjct: 137 MNYLEDRRLVHRDLAARNVLV--KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 194
Query: 168 PEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPFE 201
E + + Y + +DVWS GVT++ +M G+ P++
Sbjct: 195 LESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYD 228
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 99/215 (46%), Gaps = 27/215 (12%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRE----LLAVKFIERGQKIDEHVQREIMNHR----SL 55
++ +K +GSG FG + + W E + V E + +EI++ S+
Sbjct: 17 FKKIKVLGSGAFGT--VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE--ARFFFQ---QLISG 110
+P++ R + LT T + ++ + G L + + R +D +++ Q+ G
Sbjct: 75 DNPHVCRLLGICLTST-VQLITQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKG 129
Query: 111 VSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA---YIA 167
++Y ++ HRDL N L+ T VKI DFG +K + G ++A
Sbjct: 130 MNYLEDRRLVHRDLAARNVLV--KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 168 PEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPFE 201
E + + Y + +DVWS GVT++ +M G+ P++
Sbjct: 188 LESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYD 221
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 99/215 (46%), Gaps = 27/215 (12%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRE----LLAVKFIERGQKIDEHVQREIMNHR----SL 55
++ +K +GSG FG + + W E + V E + +EI++ S+
Sbjct: 27 FKKIKVLGSGAFGT--VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 84
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE--ARFFFQ---QLISG 110
+P++ R + LT T + ++ + G L + + R +D +++ Q+ G
Sbjct: 85 DNPHVCRLLGICLTST-VQLITQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKG 139
Query: 111 VSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA---YIA 167
++Y ++ HRDL N L+ T VKI DFG +K + G ++A
Sbjct: 140 MNYLEDRRLVHRDLAARNVLV--KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 197
Query: 168 PEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPFE 201
E + + Y + +DVWS GVT++ +M G+ P++
Sbjct: 198 LESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYD 231
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 99/215 (46%), Gaps = 27/215 (12%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRE----LLAVKFIERGQKIDEHVQREIMNHR----SL 55
++ +K +GSG FG + + W E + V E + +EI++ S+
Sbjct: 42 FKKIKVLGSGAFGT--VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 99
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE--ARFFFQ---QLISG 110
+P++ R + LT T + ++ + G L + + R +D +++ Q+ G
Sbjct: 100 DNPHVCRLLGICLTST-VQLITQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKG 154
Query: 111 VSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA---YIA 167
++Y ++ HRDL N L+ T VKI DFG +K + G ++A
Sbjct: 155 MNYLEDRRLVHRDLAARNVLV--KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 212
Query: 168 PEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPFE 201
E + + Y + +DVWS GVT++ +M G+ P++
Sbjct: 213 LESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYD 246
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 100/230 (43%), Gaps = 35/230 (15%)
Query: 2 ERYEIVKDIGSGNFGVAKLV------RDKWTR-ELLAVKFIERG---QKIDEHVQREIMN 51
+R + K +G G FG L +DK R +AVK ++ + + + + M
Sbjct: 17 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 76
Query: 52 HRSLKHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGR-----FSEDEARFFFQQ 106
KH NI+ L +++EYA+ G L E + A R +S + + +Q
Sbjct: 77 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL-QARRPPGLEYSYNPSHNPEEQ 135
Query: 107 LIS------------GVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLH 153
L S G+ Y S + HRDL N L+ +KI DFG ++ +
Sbjct: 136 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV--MKIADFGLARDIHHID 193
Query: 154 SQPKSTVG--TPAYIAPEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
K+T G ++APE L + Y + +DVWS GV L+ + +G P+
Sbjct: 194 YYKKTTNGRLPVKWMAPEALFDRIYTHQ-SDVWSFGVLLWEIFTLGGSPY 242
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 87/204 (42%), Gaps = 17/204 (8%)
Query: 10 IGSGNFGVAKLVRDKWTR-ELLAVKFI--ERGQKIDEHVQREIMNHRSLKHPNIVRFKEV 66
+G G FG K+ + + L+AVK + ER Q + Q E+ H N++R +
Sbjct: 38 LGRGGFG--KVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 95
Query: 67 LLTPTHLAIVMEYAAGGE----LFERICNAGRFSEDEARFFFQQLISGVSYCHSM---QI 119
+TPT +V Y A G L ER + + + G++Y H +I
Sbjct: 96 CMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKI 155
Query: 120 CHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQ--PKSTVGTPAYIAPEVLTKKEYD 177
HRD+K N LLD + DFG +K + G +IAPE L+ +
Sbjct: 156 IHRDVKAANILLDEEF--EAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSS 213
Query: 178 GKIADVWSCGVTLYVMLVGAYPFE 201
K DV+ GV L ++ G F+
Sbjct: 214 EK-TDVFGYGVMLLELITGQRAFD 236
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 99/215 (46%), Gaps = 27/215 (12%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRE----LLAVKFIERGQKIDEHVQREIMNHR----SL 55
++ +K +GSG FG + + W E + V E + +EI++ S+
Sbjct: 14 FKKIKVLGSGAFGT--VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 71
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE--ARFFFQ---QLISG 110
+P++ R + LT T + ++ + G L + + R +D +++ Q+ G
Sbjct: 72 DNPHVCRLLGICLTST-VQLITQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAEG 126
Query: 111 VSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA---YIA 167
++Y ++ HRDL N L+ T VKI DFG +K + G ++A
Sbjct: 127 MNYLEDRRLVHRDLAARNVLV--KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 184
Query: 168 PEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPFE 201
E + + Y + +DVWS GVT++ +M G+ P++
Sbjct: 185 LESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYD 218
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 100/230 (43%), Gaps = 35/230 (15%)
Query: 2 ERYEIVKDIGSGNFGVAKLV------RDKWTR-ELLAVKFIERG---QKIDEHVQREIMN 51
+R + K +G G FG L +DK R +AVK ++ + + + + M
Sbjct: 20 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 79
Query: 52 HRSLKHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGR-----FSEDEARFFFQQ 106
KH NI+ L +++EYA+ G L E + A R +S + + +Q
Sbjct: 80 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL-QARRPPGLEYSYNPSHNPEEQ 138
Query: 107 LIS------------GVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLH 153
L S G+ Y S + HRDL N L+ +KI DFG ++ +
Sbjct: 139 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV--MKIADFGLARDIHHID 196
Query: 154 SQPKSTVGT--PAYIAPEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
K+T G ++APE L + Y + +DVWS GV L+ + +G P+
Sbjct: 197 YYKKTTNGRLPVKWMAPEALFDRIYTHQ-SDVWSFGVLLWEIFTLGGSPY 245
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 99/215 (46%), Gaps = 27/215 (12%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRE----LLAVKFIERGQKIDEHVQREIMNHR----SL 55
++ +K +GSG FG + + W E + V E + +EI++ S+
Sbjct: 19 FKKIKVLGSGAFGT--VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE--ARFFFQ---QLISG 110
+P++ R + LT T + ++ + G L + + R +D +++ Q+ G
Sbjct: 77 DNPHVCRLLGICLTST-VQLITQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKG 131
Query: 111 VSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA---YIA 167
++Y ++ HRDL N L+ T VKI DFG +K + G ++A
Sbjct: 132 MNYLEDRRLVHRDLAARNVLV--KTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 168 PEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPFE 201
E + + Y + +DVWS GVT++ +M G+ P++
Sbjct: 190 LESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYD 223
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 99/215 (46%), Gaps = 27/215 (12%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRE----LLAVKFIERGQKIDEHVQREIMNHR----SL 55
++ +K +GSG FG + + W E + V E + +EI++ S+
Sbjct: 17 FKKIKVLGSGAFGT--VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE--ARFFFQ---QLISG 110
+P++ R + LT T + ++ + G L + + R +D +++ Q+ G
Sbjct: 75 DNPHVCRLLGICLTST-VQLITQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKG 129
Query: 111 VSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA---YIA 167
++Y ++ HRDL N L+ T VKI DFG +K + G ++A
Sbjct: 130 MNYLEDRRLVHRDLAARNVLV--KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 168 PEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPFE 201
E + + Y + +DVWS GVT++ +M G+ P++
Sbjct: 188 LESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYD 221
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 100/230 (43%), Gaps = 35/230 (15%)
Query: 2 ERYEIVKDIGSGNFGVAKLV------RDKWTR-ELLAVKFIERG---QKIDEHVQREIMN 51
+R + K +G G FG L +DK R +AVK ++ + + + + M
Sbjct: 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 128
Query: 52 HRSLKHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGR-----FSEDEARFFFQQ 106
KH NI+ L +++EYA+ G L E + A R +S + + +Q
Sbjct: 129 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL-QARRPPGLEYSYNPSHNPEEQ 187
Query: 107 LIS------------GVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLH 153
L S G+ Y S + HRDL N L+ +KI DFG ++ +
Sbjct: 188 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV--MKIADFGLARDIHHID 245
Query: 154 SQPKSTVG--TPAYIAPEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
K+T G ++APE L + Y + +DVWS GV L+ + +G P+
Sbjct: 246 YYKKTTNGRLPVKWMAPEALFDRIYTHQ-SDVWSFGVLLWEIFTLGGSPY 294
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 96/230 (41%), Gaps = 35/230 (15%)
Query: 2 ERYEIVKDIGSGNFGVAKLV------RDKWTR-ELLAVKFIERG---QKIDEHVQREIMN 51
+R + K +G G FG L +DK R +AVK ++ + + + + M
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 52 HRSLKHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGR----------------- 94
KH NI+ L +++EYA+ G L E + A R
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL-QARRPPGLEYCYNPSHNPEEQ 146
Query: 95 FSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLH 153
S + Q+ G+ Y S + HRDL N L+ +KI DFG ++ +
Sbjct: 147 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV--MKIADFGLARDIHHID 204
Query: 154 SQPKSTVG--TPAYIAPEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
K+T G ++APE L + Y + +DVWS GV L+ + +G P+
Sbjct: 205 YYKKTTNGRLPVKWMAPEALFDRIYTHQ-SDVWSFGVLLWEIFTLGGSPY 253
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 100/230 (43%), Gaps = 35/230 (15%)
Query: 2 ERYEIVKDIGSGNFGVAKLV------RDKWTR-ELLAVKFIERG---QKIDEHVQREIMN 51
+R + K +G G FG L +DK R +AVK ++ + + + + M
Sbjct: 21 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 80
Query: 52 HRSLKHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGR-----FSEDEARFFFQQ 106
KH NI+ L +++EYA+ G L E + A R +S + + +Q
Sbjct: 81 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL-QARRPPGLEYSYNPSHNPEEQ 139
Query: 107 LIS------------GVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLH 153
L S G+ Y S + HRDL N L+ +KI DFG ++ +
Sbjct: 140 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV--MKIADFGLARDIHHID 197
Query: 154 SQPKSTVG--TPAYIAPEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
K+T G ++APE L + Y + +DVWS GV L+ + +G P+
Sbjct: 198 YYKKTTNGRLPVKWMAPEALFDRIYTHQ-SDVWSFGVLLWEIFTLGGSPY 246
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 99/215 (46%), Gaps = 27/215 (12%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRE----LLAVKFIERGQKIDEHVQREIMNHR----SL 55
++ +K +GSG FG + + W E + V E + +EI++ S+
Sbjct: 11 FKKIKVLGSGAFGT--VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE--ARFFFQ---QLISG 110
+P++ R + LT T + ++ + G L + + R +D +++ Q+ G
Sbjct: 69 DNPHVCRLLGICLTST-VQLITQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKG 123
Query: 111 VSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA---YIA 167
++Y ++ HRDL N L+ T VKI DFG +K + G ++A
Sbjct: 124 MNYLEDRRLVHRDLAARNVLV--KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 181
Query: 168 PEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPFE 201
E + + Y + +DVWS GVT++ +M G+ P++
Sbjct: 182 LESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYD 215
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 96/230 (41%), Gaps = 35/230 (15%)
Query: 2 ERYEIVKDIGSGNFGVAKLV------RDKWTR-ELLAVKFIERG---QKIDEHVQREIMN 51
+R + K +G G FG L +DK R +AVK ++ + + + + M
Sbjct: 13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 72
Query: 52 HRSLKHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGR----------------- 94
KH NI+ L +++EYA+ G L E + A R
Sbjct: 73 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL-QARRPPGLEYCYNPSHNPEEQ 131
Query: 95 FSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLH 153
S + Q+ G+ Y S + HRDL N L+ +KI DFG ++ +
Sbjct: 132 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV--MKIADFGLARDIHHID 189
Query: 154 SQPKSTVG--TPAYIAPEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
K+T G ++APE L + Y + +DVWS GV L+ + +G P+
Sbjct: 190 YYKKTTNGRLPVKWMAPEALFDRIYTHQ-SDVWSFGVLLWEIFTLGGSPY 238
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 99/215 (46%), Gaps = 27/215 (12%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRE----LLAVKFIERGQKIDEHVQREIMNHR----SL 55
++ +K +GSG FG + + W E + V E + +EI++ S+
Sbjct: 24 FKKIKVLGSGAFGT--VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE--ARFFFQ---QLISG 110
+P++ R + LT T + ++ + G L + + R +D +++ Q+ G
Sbjct: 82 DNPHVCRLLGICLTST-VQLITQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKG 136
Query: 111 VSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA---YIA 167
++Y ++ HRDL N L+ T VKI DFG +K + G ++A
Sbjct: 137 MNYLEDRRLVHRDLAARNVLV--KTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 194
Query: 168 PEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPFE 201
E + + Y + +DVWS GVT++ +M G+ P++
Sbjct: 195 LESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYD 228
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 100/230 (43%), Gaps = 35/230 (15%)
Query: 2 ERYEIVKDIGSGNFGVAKLV------RDKWTR-ELLAVKFIERG---QKIDEHVQREIMN 51
+R + K +G G FG L +DK R +AVK ++ + + + + M
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 52 HRSLKHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGR-----FSEDEARFFFQQ 106
KH NI+ L +++EYA+ G L E + A R +S + + +Q
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL-QARRPPGLEYSYNPSHNPEEQ 146
Query: 107 LIS------------GVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLH 153
L S G+ Y S + HRDL N L+ +KI DFG ++ +
Sbjct: 147 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV--MKIADFGLARDIHHID 204
Query: 154 SQPKSTVG--TPAYIAPEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
K+T G ++APE L + Y + +DVWS GV L+ + +G P+
Sbjct: 205 YYKKTTNGRLPVKWMAPEALFDRIYTHQ-SDVWSFGVLLWEIFTLGGSPY 253
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 99/261 (37%), Gaps = 66/261 (25%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKH--PN- 59
RY +++ +G G+F L D ++ +A+K ++ + E EI +S+++ PN
Sbjct: 22 RYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPND 81
Query: 60 ---------IVRFKEVLLTPTHLAIVMEYAAGGELFERI--CNAGRFSEDEARFFFQQLI 108
+ FK + TH+ +V E G L + I N + QQ++
Sbjct: 82 PNREMVVQLLDDFKISGVNGTHICMVFE-VLGHHLLKWIIKSNYQGLPLPCVKKIIQQVL 140
Query: 109 SGVSYCHS-MQICHRDLKLENTLLD----------------------------GSTAP-- 137
G+ Y H+ +I H D+K EN LL STAP
Sbjct: 141 QGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPAT 200
Query: 138 -----------------RVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKI 180
+VKI D G + +H + T Y + EVL Y+
Sbjct: 201 AGNFLVNPLEPKNAEKLKVKIADLG--NACWVHKHFTEDIQTRQYRSLEVLIGSGYNTP- 257
Query: 181 ADVWSCGVTLYVMLVGAYPFE 201
AD+WS + + G Y FE
Sbjct: 258 ADIWSTACMAFELATGDYLFE 278
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 99/215 (46%), Gaps = 27/215 (12%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRE----LLAVKFIERGQKIDEHVQREIMNHR----SL 55
++ +K +GSG FG + + W E + V E + +EI++ S+
Sbjct: 17 FKKIKVLGSGAFGT--VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE--ARFFFQ---QLISG 110
+P++ R + LT T + ++ + G L + + R +D +++ Q+ G
Sbjct: 75 DNPHVCRLLGICLTST-VQLITQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKG 129
Query: 111 VSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA---YIA 167
++Y ++ HRDL N L+ T VKI DFG +K + G ++A
Sbjct: 130 MNYLEDRRLVHRDLAARNVLV--KTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 168 PEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPFE 201
E + + Y + +DVWS GVT++ +M G+ P++
Sbjct: 188 LESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYD 221
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 98/229 (42%), Gaps = 33/229 (14%)
Query: 2 ERYEIVKDIGSGNFGVAKLV------RDKWTR-ELLAVKFIERG---QKIDEHVQREIMN 51
+R + K +G G FG L +DK R +AVK ++ + + + + M
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 52 HRSLKHPNIVRFKEVLLTPTHLAIVMEYAAGGELFE----RICNAGRFSEDEARFFFQQL 107
KH NI+ L +++EYA+ G L E R +S + + +QL
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQL 147
Query: 108 IS------------GVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKS-SVLHS 154
S G+ Y S + HRDL N L+ +KI DFG ++ +
Sbjct: 148 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV--MKIADFGLARDIHHIDY 205
Query: 155 QPKSTVG--TPAYIAPEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
K+T G ++APE L + Y + +DVWS GV L+ + +G P+
Sbjct: 206 YKKTTNGRLPVKWMAPEALFDRIYTHQ-SDVWSFGVLLWEIFTLGGSPY 253
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 99/261 (37%), Gaps = 66/261 (25%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKH--PN- 59
RY +++ +G G+F L D ++ +A+K ++ + E EI +S+++ PN
Sbjct: 38 RYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPND 97
Query: 60 ---------IVRFKEVLLTPTHLAIVMEYAAGGELFERI--CNAGRFSEDEARFFFQQLI 108
+ FK + TH+ +V E G L + I N + QQ++
Sbjct: 98 PNREMVVQLLDDFKISGVNGTHICMVFE-VLGHHLLKWIIKSNYQGLPLPCVKKIIQQVL 156
Query: 109 SGVSYCHS-MQICHRDLKLENTLLD----------------------------GSTAP-- 137
G+ Y H+ +I H D+K EN LL STAP
Sbjct: 157 QGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPAT 216
Query: 138 -----------------RVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKI 180
+VKI D G + +H + T Y + EVL Y+
Sbjct: 217 AGNFLVNPLEPKNAEKLKVKIADLG--NACWVHKHFTEDIQTRQYRSLEVLIGSGYNTP- 273
Query: 181 ADVWSCGVTLYVMLVGAYPFE 201
AD+WS + + G Y FE
Sbjct: 274 ADIWSTACMAFELATGDYLFE 294
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 94/215 (43%), Gaps = 24/215 (11%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKH----PN 59
+ + K IG GNFG +L ++ +T E +A+K +E + + E ++ L P
Sbjct: 32 FRVGKKIGCGNFGELRLGKNLYTNEYVAIK-LEPMKSRAPQLHLEYRFYKQLGSGDGIPQ 90
Query: 60 IVRFKEVLLTPTHLAIVMEYAAGG--ELFERICNAGRFSEDEARFFFQQLISGVSYCHSM 117
+ F + A+V+E +LF+ +C+ FS QLIS + Y HS
Sbjct: 91 VYYFGPC---GKYNAMVLELLGPSLEDLFD-LCDR-TFSLKTVLMIAIQLISRMEYVHSK 145
Query: 118 QICHRDLKLENTLL---DGSTAPRVKICDFGY--------SKSSVLHSQPKSTVGTPAYI 166
+ +RD+K EN L+ T + I DF +K + + + KS GT Y+
Sbjct: 146 NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYM 205
Query: 167 APEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFE 201
+ KE + D+ + G L G+ P++
Sbjct: 206 SINTHLGKE-QSRRDDLEALGHMFMYFLRGSLPWQ 239
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 94/215 (43%), Gaps = 24/215 (11%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKH----PN 59
+ + K IG GNFG +L ++ +T E +A+K +E + + E ++ L P
Sbjct: 11 FRVGKKIGCGNFGELRLGKNLYTNEYVAIK-LEPMKSRAPQLHLEYRFYKQLGSGDGIPQ 69
Query: 60 IVRFKEVLLTPTHLAIVMEYAAGG--ELFERICNAGRFSEDEARFFFQQLISGVSYCHSM 117
+ F + A+V+E +LF+ +C+ FS QLIS + Y HS
Sbjct: 70 VYYFGPC---GKYNAMVLELLGPSLEDLFD-LCDR-TFSLKTVLMIAIQLISRMEYVHSK 124
Query: 118 QICHRDLKLENTLL---DGSTAPRVKICDFGY--------SKSSVLHSQPKSTVGTPAYI 166
+ +RD+K EN L+ T + I DF +K + + + KS GT Y+
Sbjct: 125 NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYM 184
Query: 167 APEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFE 201
+ KE + D+ + G L G+ P++
Sbjct: 185 SINTHLGKE-QSRRDDLEALGHMFMYFLRGSLPWQ 218
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 94/218 (43%), Gaps = 30/218 (13%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKH------ 57
+ + K IG GNFG +L ++ +T E +A+K + I + + +R K
Sbjct: 6 FRVGKKIGCGNFGELRLGKNLYTNEYVAIKL----EPIKSRAPQLHLEYRFYKQLSATEG 61
Query: 58 -PNIVRFKEVLLTPTHLAIVMEYAAGG--ELFERICNAGRFSEDEARFFFQQLISGVSYC 114
P + F + A+V+E +LF+ +C+ F+ QLI+ + Y
Sbjct: 62 VPQVYYFGP---XGKYNAMVLELLGPSLEDLFD-LCDR-TFTLKTVLMIAIQLITRMEYV 116
Query: 115 HSMQICHRDLKLENTLLDGSTAPR---VKICDFGY--------SKSSVLHSQPKSTVGTP 163
H+ + +RD+K EN L+ R + I DFG +K + + + KS GT
Sbjct: 117 HTKSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTA 176
Query: 164 AYIAPEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFE 201
Y++ KE + D+ + G L G+ P++
Sbjct: 177 RYMSINTHLGKE-QSRRDDLEALGHMFMYFLRGSLPWQ 213
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 84/186 (45%), Gaps = 15/186 (8%)
Query: 30 LAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRFKEVLLTPTHLAIVMEYAAGGEL--FE 87
+AVK +++G + E + L+H +VR V+ T + I+ EY G L F
Sbjct: 40 VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFL 98
Query: 88 RICNAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYS 147
+ + + + ++ Q+ G+++ HRDL+ N L+ + + KI DFG +
Sbjct: 99 KTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLS--CKIADFGLA 156
Query: 148 KSSVLHSQPKSTVGTPA-----YIAPEVLTKKEYDGKIADVWSCGVTLYVMLV-GAYPFE 201
+ L + T A + APE + + K +DVWS G+ L ++ G P+
Sbjct: 157 R---LIEDAEXTAREGAKFPIKWTAPEAINYGTFTIK-SDVWSFGILLTEIVTHGRIPYP 212
Query: 202 DPEDPK 207
+P+
Sbjct: 213 GMTNPE 218
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 76/178 (42%), Gaps = 23/178 (12%)
Query: 43 EHVQREIMNHRSLKHPNIVRFKEVLLTPTHLAIVMEYAAGGELFE----RICNAGRFSED 98
E + E M L+HPN+V V+ L+++ Y + G+L E R ++ S D
Sbjct: 74 EEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTD 133
Query: 99 EAR------------FFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGY 146
+ R Q+ +G+ Y S + H+DL N L+ VKI D G
Sbjct: 134 DDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKL--NVKISDLGL 191
Query: 147 SKSSVLHSQPK---STVGTPAYIAPEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
+ K +++ ++APE + ++ +D+WS GV L+ V G P+
Sbjct: 192 FREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSID-SDIWSYGVVLWEVFSYGLQPY 248
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 76/178 (42%), Gaps = 23/178 (12%)
Query: 43 EHVQREIMNHRSLKHPNIVRFKEVLLTPTHLAIVMEYAAGGELFE----RICNAGRFSED 98
E + E M L+HPN+V V+ L+++ Y + G+L E R ++ S D
Sbjct: 57 EEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTD 116
Query: 99 EAR------------FFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGY 146
+ R Q+ +G+ Y S + H+DL N L+ VKI D G
Sbjct: 117 DDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKL--NVKISDLGL 174
Query: 147 SKSSVLHSQPK---STVGTPAYIAPEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
+ K +++ ++APE + ++ +D+WS GV L+ V G P+
Sbjct: 175 FREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSID-SDIWSYGVVLWEVFSYGLQPY 231
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 94/221 (42%), Gaps = 33/221 (14%)
Query: 8 KDIGSGNFG-VAKLVRDKWTRE----LLAVKFIERGQKIDEH----VQREIMNHRSLKHP 58
K +G+G FG V + +E +AVK ++ DE + +IM+H +H
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLG-QHE 110
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARF--------------FF 104
NIV + ++ EY G+L + R E + F F
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFS 170
Query: 105 QQLISGVSYCHSMQICHRDLKLENTLL-DGSTAPRVKICDFGYSKSSVLHSQ--PKSTVG 161
Q+ G+++ S HRD+ N LL +G A KI DFG ++ + S K
Sbjct: 171 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA---KIGDFGLARDIMNDSNYIVKGNAR 227
Query: 162 TPA-YIAPEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
P ++APE + Y + +DVWS G+ L+ + +G P+
Sbjct: 228 LPVKWMAPESIFDCVYTVQ-SDVWSYGILLWEIFSLGLNPY 267
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 94/221 (42%), Gaps = 33/221 (14%)
Query: 8 KDIGSGNFG-VAKLVRDKWTRE----LLAVKFIERGQKIDEH----VQREIMNHRSLKHP 58
K +G+G FG V + +E +AVK ++ DE + +IM+H +H
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLG-QHE 110
Query: 59 NIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARF--------------FF 104
NIV + ++ EY G+L + R E + F F
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFS 170
Query: 105 QQLISGVSYCHSMQICHRDLKLENTLL-DGSTAPRVKICDFGYSKSSVLHSQ--PKSTVG 161
Q+ G+++ S HRD+ N LL +G A KI DFG ++ + S K
Sbjct: 171 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA---KIGDFGLARDIMNDSNYIVKGNAR 227
Query: 162 TPA-YIAPEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPF 200
P ++APE + Y + +DVWS G+ L+ + +G P+
Sbjct: 228 LPVKWMAPESIFDCVYTVQ-SDVWSYGILLWEIFSLGLNPY 267
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 87/189 (46%), Gaps = 17/189 (8%)
Query: 10 IGSGNFGVAKLVRDKW---TRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRFKEV 66
+G G FG ++ W TR +A+K ++ G E +E + L+H +V+ V
Sbjct: 16 LGQGCFG--EVWMGTWNGTTR--VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 71
Query: 67 LLTPTHLAIVMEYAAGGELFERI-CNAGRFSE-DEARFFFQQLISGVSYCHSMQICHRDL 124
+ + + IV EY + G L + + G++ + Q+ SG++Y M HRDL
Sbjct: 72 V-SEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 130
Query: 125 KLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTP---AYIAPEVLTKKEYDGKIA 181
+ N L+ + K+ DFG ++ + ++ + G + APE + K +
Sbjct: 131 RAANILVGENLV--CKVADFGLAR-LIEDNEXTARQGAKFPIKWTAPEAALYGRFTIK-S 186
Query: 182 DVWSCGVTL 190
DVWS G+ L
Sbjct: 187 DVWSFGILL 195
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 86/188 (45%), Gaps = 15/188 (7%)
Query: 10 IGSGNFGVAKLVRDKW---TRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRFKEV 66
+G G FG ++ W TR +A+K ++ G E +E + L+H +V+ V
Sbjct: 26 LGQGCFG--EVWMGTWNGTTR--VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 67 LLTPTHLAIVMEYAAGGELFERI-CNAGRFSE-DEARFFFQQLISGVSYCHSMQICHRDL 124
+ + + IVMEY + G L + + G++ + Q+ SG++Y M HRDL
Sbjct: 82 V-SEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 125 KLENTLLDGSTAPRVKICDFGYSK--SSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKIAD 182
+ N L+ + K+ DFG ++ ++ + + APE + K +D
Sbjct: 141 RAANILVGENLV--CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK-SD 197
Query: 183 VWSCGVTL 190
VWS G+ L
Sbjct: 198 VWSFGILL 205
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 88/189 (46%), Gaps = 17/189 (8%)
Query: 10 IGSGNFGVAKLVRDKW---TRELLAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRFKEV 66
+G G FG ++ W TR +A+K ++ G E +E + L+H +V+ V
Sbjct: 26 LGQGCFG--EVWMGTWNGTTR--VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 67 LLTPTHLAIVMEYAAGGELFERI-CNAGRFSE-DEARFFFQQLISGVSYCHSMQICHRDL 124
+ + + IV+EY + G L + + G++ + Q+ SG++Y M HRDL
Sbjct: 82 V-SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 125 KLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTP---AYIAPEVLTKKEYDGKIA 181
+ N L+ + K+ DFG ++ + ++ + G + APE + K +
Sbjct: 141 RAANILVGENLV--CKVADFGLAR-LIEDNEXTARQGAKFPIKWTAPEAALYGRFTIK-S 196
Query: 182 DVWSCGVTL 190
DVWS G+ L
Sbjct: 197 DVWSFGILL 205
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 93/217 (42%), Gaps = 31/217 (14%)
Query: 6 IVKDIGSGNFGVAKLVRDKWTRELLAVKFIERGQKIDEHVQREIMNHRSLKH-------- 57
+ K IG GNFG +L ++ +T E +A+K + I + + +R K
Sbjct: 4 VGKKIGCGNFGELRLGKNLYTNEYVAIKL----EPIKSRAPQLHLEYRFYKQLGSAGEGL 59
Query: 58 PNIVRFKEVLLTPTHLAIVMEYAAGG--ELFERICNAGRFSEDEARFFFQQLISGVSYCH 115
P + F + A+V+E +LF+ +C+ F+ QL+S + Y H
Sbjct: 60 PQVYYFGP---XGKYNAMVLELLGPSLEDLFD-LCDR-TFTLKTVLMIAIQLLSRMEYVH 114
Query: 116 SMQICHRDLKLENTLLDGSTAPR---VKICDFGY--------SKSSVLHSQPKSTVGTPA 164
S + +RD+K EN L+ + + I DFG +K + + + KS GT
Sbjct: 115 SKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTAR 174
Query: 165 YIAPEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFE 201
Y++ KE + D+ + G L G+ P++
Sbjct: 175 YMSINTHLGKE-QSRRDDLEALGHMFMYFLRGSLPWQ 210
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 98/215 (45%), Gaps = 27/215 (12%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRE----LLAVKFIERGQKIDEHVQREIMNHR----SL 55
++ +K + SG FG + + W E + V E + +EI++ S+
Sbjct: 17 FKKIKVLSSGAFGT--VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE--ARFFFQ---QLISG 110
+P++ R + LT T + ++ + G L + + R +D +++ Q+ G
Sbjct: 75 DNPHVCRLLGICLTST-VQLITQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKG 129
Query: 111 VSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA---YIA 167
++Y ++ HRDL N L+ T VKI DFG +K + G ++A
Sbjct: 130 MNYLEDRRLVHRDLAARNVLV--KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 168 PEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPFE 201
E + + Y + +DVWS GVT++ +M G+ P++
Sbjct: 188 LESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYD 221
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 23/174 (13%)
Query: 57 HPNIVR-FKEVLLTPTHLA----IVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGV 111
HP+IV+ F V T H IVMEY GG+ +R + EA + +++ +
Sbjct: 138 HPSIVQIFNFVEHTDRHGDPVGYIVMEYV-GGQSLKR-SKGQKLPVAEAIAYLLEILPAL 195
Query: 112 SYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL 171
SY HS+ + + DLK EN +L T ++K+ D G S ++S GTP + APE++
Sbjct: 196 SYLHSIGLVYNDLKPENIML---TEEQLKLIDLG--AVSRINSF-GYLYGTPGFQAPEIV 249
Query: 172 TKKEYDGKIADVWSCGVTLYVMLV------GAYPFEDPEDPKNFR--KTIGRIL 217
+ D+++ G TL + + G Y PED + + GR+L
Sbjct: 250 --RTGPTVATDIYTVGRTLAALTLDLPTRNGRYVDGLPEDDPVLKTYDSYGRLL 301
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 20/213 (9%)
Query: 3 RYEIVKDIGSGNFGVAKLVRDKWTRELLAVKF-IERGQKIDEHVQREI--MNHRSLKHPN 59
RY + + IGSG+FG L D E +A+K + + H++ +I M + P
Sbjct: 10 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPT 69
Query: 60 IVRFKEVLLTPTHLAIVMEYAAGGELFERICN--AGRFSEDEARFFFQQLISGVSYCHSM 117
I + + +VME G E + N + +FS Q+IS + Y HS
Sbjct: 70 I---RWCGAEGDYNVMVMELL--GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK 124
Query: 118 QICHRDLKLENTLLD-GSTAPRVKICDFGYSK--------SSVLHSQPKSTVGTPAYIAP 168
HRD+K +N L+ G V I DFG +K + + + K+ GT Y +
Sbjct: 125 NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI 184
Query: 169 EVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFE 201
E + D+ S G L +G+ P++
Sbjct: 185 NTHLGIE-QSRRDDLESLGYVLMYFNLGSLPWQ 216
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 98/215 (45%), Gaps = 27/215 (12%)
Query: 4 YEIVKDIGSGNFGVAKLVRDKWTRE----LLAVKFIERGQKIDEHVQREIMNHR----SL 55
++ +K + SG FG + + W E + V E + +EI++ S+
Sbjct: 24 FKKIKVLSSGAFGT--VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 56 KHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDE--ARFFFQ---QLISG 110
+P++ R + LT T + ++ + G L + + R +D +++ Q+ G
Sbjct: 82 DNPHVCRLLGICLTST-VQLITQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKG 136
Query: 111 VSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPA---YIA 167
++Y ++ HRDL N L+ T VKI DFG +K + G ++A
Sbjct: 137 MNYLEDRRLVHRDLAARNVLV--KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 194
Query: 168 PEVLTKKEYDGKIADVWSCGVTLY-VMLVGAYPFE 201
E + + Y + +DVWS GVT++ +M G+ P++
Sbjct: 195 LESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYD 228
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,972,354
Number of Sequences: 62578
Number of extensions: 410324
Number of successful extensions: 4297
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 776
Number of HSP's successfully gapped in prelim test: 276
Number of HSP's that attempted gapping in prelim test: 1193
Number of HSP's gapped (non-prelim): 1236
length of query: 338
length of database: 14,973,337
effective HSP length: 99
effective length of query: 239
effective length of database: 8,778,115
effective search space: 2097969485
effective search space used: 2097969485
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)