Query 019630
Match_columns 338
No_of_seqs 189 out of 1311
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 04:43:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019630.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019630hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ok3_A Peptidyl-prolyl CIS-tra 100.0 6.6E-37 2.2E-41 269.4 17.7 150 163-333 1-156 (161)
2 2fu0_A Cyclophilin, putative; 100.0 8.4E-37 2.9E-41 268.6 17.5 150 162-332 5-159 (160)
3 2x7k_A Peptidyl-prolyl CIS-tra 100.0 1.7E-36 5.8E-41 268.1 16.8 150 161-331 10-164 (166)
4 2a2n_A Peptidylprolyl isomeras 100.0 3.5E-36 1.2E-40 268.5 18.1 152 159-331 18-175 (176)
5 2poe_A Cyclophilin-like protei 100.0 5.7E-36 1.9E-40 269.0 18.0 152 160-332 14-174 (185)
6 2b71_A Cyclophilin-like protei 100.0 7.3E-36 2.5E-40 270.5 17.6 152 161-333 37-193 (196)
7 3bo7_A Peptidyl-prolyl CIS-tra 100.0 8.9E-36 3E-40 270.9 17.3 157 160-332 4-184 (201)
8 1zkc_A Peptidyl-prolyl CIS-tra 100.0 1.1E-35 3.7E-40 269.5 17.6 138 159-310 16-158 (197)
9 2k7n_A Peptidyl-prolyl CIS-tra 100.0 1.8E-35 6E-40 269.2 16.1 152 161-333 10-166 (203)
10 1w74_A Peptidyl-prolyl CIS-tra 100.0 1.3E-34 4.5E-39 261.3 18.1 148 158-331 19-190 (191)
11 3s6m_A Peptidyl-prolyl CIS-tra 100.0 6.4E-35 2.2E-39 257.9 14.9 149 161-331 2-166 (167)
12 1v9t_A Cyclophilin B; beta bar 100.0 3.4E-34 1.2E-38 253.2 17.3 149 160-332 2-165 (166)
13 1lop_A Cyclophilin A; rotamase 100.0 2.7E-34 9.1E-39 253.4 14.7 146 164-331 1-162 (164)
14 2hq6_A Serologically defined c 100.0 1.5E-33 5E-38 253.4 17.7 152 158-331 20-178 (185)
15 1mzw_A Cyclophilin H, U-snRNP- 100.0 1.4E-33 4.6E-38 251.9 17.4 139 161-314 9-166 (177)
16 2wfi_A Peptidyl-prolyl CIS-tra 100.0 1.3E-33 4.4E-38 252.4 16.2 133 168-315 20-169 (179)
17 3ich_A Peptidyl-prolyl CIS-tra 100.0 2.8E-33 9.5E-38 252.1 17.2 131 169-314 27-166 (188)
18 2cmt_A Peptidyl-prolyl CIS-tra 100.0 3.6E-33 1.2E-37 248.1 17.7 134 161-309 9-156 (172)
19 2haq_A Cyclophilin; rotamase, 100.0 1.5E-33 5E-38 250.7 15.0 131 168-314 22-161 (172)
20 3pmp_A Cyclophilin A; peptidyl 100.0 4E-33 1.4E-37 245.9 17.5 126 169-309 14-148 (164)
21 2r99_A Peptidyl-prolyl CIS-tra 100.0 5.1E-33 1.8E-37 247.3 18.2 133 162-309 11-157 (173)
22 1a58_A Cyclophilin; isomerase, 100.0 6E-33 2E-37 247.7 18.2 138 162-314 6-165 (177)
23 4fru_A Cyclophilin B, peptidyl 100.0 5.1E-33 1.7E-37 249.7 17.7 142 161-318 11-167 (185)
24 2he9_A NK-tumor recognition pr 100.0 2.9E-33 9.8E-38 252.8 16.0 132 168-314 30-178 (192)
25 1qng_A Peptidyl-prolyl CIS-tra 100.0 4.7E-33 1.6E-37 246.9 16.4 132 162-308 3-154 (170)
26 2z6w_A Peptidyl-prolyl CIS-tra 100.0 9.4E-33 3.2E-37 243.9 17.7 125 169-308 15-148 (165)
27 3bkp_A Cyclophilin; malaria, i 100.0 1E-32 3.5E-37 255.7 17.9 161 158-331 17-203 (232)
28 2igv_A Peptidyl-prolyl CIS-tra 100.0 1.1E-32 3.7E-37 245.2 17.2 132 163-309 4-156 (173)
29 3k2c_A Peptidyl-prolyl CIS-tra 100.0 2.6E-32 8.8E-37 246.7 17.9 133 162-309 27-173 (193)
30 2poy_A Peptidyl-prolyl CIS-tra 100.0 2.1E-32 7.2E-37 246.0 16.7 134 160-308 17-171 (186)
31 1z81_A Cyclophilin; structural 100.0 2.9E-32 1E-36 252.1 17.4 137 160-310 57-213 (229)
32 3rdd_A Peptidyl-prolyl CIS-tra 100.0 3.2E-32 1.1E-36 244.4 17.2 133 161-309 21-168 (184)
33 2c3b_A Ppiase, cyclophilin; is 100.0 2.5E-33 8.7E-38 249.1 9.9 129 167-310 17-156 (172)
34 2ose_A Probable peptidyl-proly 100.0 8.8E-32 3E-36 249.8 15.0 135 162-313 14-194 (234)
35 1ihg_A Cyclophilin 40; ppiase 100.0 2.3E-30 7.8E-35 251.6 16.9 133 162-309 15-169 (370)
36 3rfy_A Peptidyl-prolyl CIS-tra 100.0 6.3E-29 2.2E-33 243.3 10.5 142 161-306 169-346 (369)
37 2nnz_A Hypothetical protein; b 92.8 0.12 4.2E-06 44.5 5.1 104 162-302 29-142 (153)
38 2f83_A Coagulation factor XI; 92.1 0.16 5.6E-06 52.4 5.9 59 69-137 24-83 (625)
39 2yil_A Microneme antigen L2; s 91.8 0.13 4.3E-06 43.7 3.8 54 66-137 81-134 (138)
40 2yil_A Microneme antigen L2; s 91.3 0.13 4.6E-06 43.5 3.5 50 74-137 14-63 (138)
41 2f83_A Coagulation factor XI; 91.0 0.28 9.7E-06 50.6 6.3 63 65-137 108-172 (625)
42 4a5v_A MIC4, micronemal protei 90.6 0.26 9E-06 42.4 4.7 55 66-137 83-138 (161)
43 4a5v_A MIC4, micronemal protei 90.1 0.28 9.5E-06 42.3 4.5 56 66-137 10-65 (161)
44 3kop_A Uncharacterized protein 87.7 6.4 0.00022 34.8 11.4 46 163-208 22-75 (188)
45 1zx8_A Hypothetical protein TM 76.2 8.2 0.00028 32.4 7.4 102 162-302 12-123 (136)
46 2ll3_A Micronemal protein 4; c 41.8 15 0.00053 28.1 2.6 38 86-137 27-64 (82)
47 3j1r_A Archaeal adhesion filam 40.4 25 0.00086 21.2 2.8 21 14-34 6-26 (26)
48 1x7f_A Outer surface protein; 26.1 41 0.0014 32.8 3.3 47 256-303 325-376 (385)
49 2p0o_A Hypothetical protein DU 24.1 40 0.0014 32.7 2.8 47 256-303 299-350 (372)
50 3bo0_B Preprotein translocase 22.8 68 0.0023 22.8 3.2 31 2-33 24-57 (65)
51 1q90_R Cytochrome B6-F complex 22.3 81 0.0028 21.8 3.3 24 7-30 6-29 (49)
No 1
>2ok3_A Peptidyl-prolyl CIS-trans isomerase-like 3; beta-barrel, helix, disulfide bridge; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1xyh_A 2oju_A*
Probab=100.00 E-value=6.6e-37 Score=269.42 Aligned_cols=150 Identities=23% Similarity=0.364 Sum_probs=122.6
Q ss_pred eEEEEEEeeeeEEEEecCCCChHHHHHHHHHHhCCCCCCcEEEEeeeCCccccCCCCcccCCCCccCCCccccCCCcccC
Q 019630 163 GIVRLETEYGTLHVKLLPDSAPLSVAYMLELLASRHCVGCQFHRAESRGTHWDTEGNHIENAPGGYGPPFALIQGSLETH 242 (338)
Q Consensus 163 ~~V~l~T~~G~I~IeL~~d~AP~tv~nFl~L~~~g~YdG~~F~Rv~~~~q~GDp~g~~ik~~~~~~G~p~~liqGg~~~~ 242 (338)
++|+|+|+.|+|+|+||++.||+||+||++||+.|||+|+.||||+++ +++|.|+|.....|+.++|
T Consensus 1 m~v~~~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~fhRvi~~-------------f~iQgGd~~~~g~gg~si~ 67 (161)
T 2ok3_A 1 MSVTLHTDVGDIKIEVFCERTPKTCENFLALCASNYYNGCIFHRNIKG-------------FMVQTGDPTGTGRGGNSIW 67 (161)
T ss_dssp CEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBCCEEETT-------------TEEEECCTTSSSSCCCCTT
T ss_pred CEEEEEeCCccEEEEEcCCCCcHHHHHHHHHhhhcccCCCEEEEEECC-------------CEEecCCCCCCCCCCCccc
Confidence 579999999999999999999999999999999999999999999544 4445555544455666777
Q ss_pred CCcCCCcCccccCCCCCceEeeeCCC-----CeEEEEcCCCCCCCCCceEEEEEEcccHHHHHHHhcCCCCCc-ccccee
Q 019630 243 SITFKEIPLEVCSTIRRGSVAWVGSG-----PEFFISLANHNEWKKVYTVFGIVLPEDMAIAERIARLPTKQE-VWSNVN 316 (338)
Q Consensus 243 g~~~~~i~~E~~~~~~rG~Vsma~sG-----sqFFItL~d~p~ldg~ytVFG~Vi~eGmdvLdkI~~~~t~~~-~~~~i~ 316 (338)
+..++++....++|.++|+||||++| |||||++++.++||++|+|||+|+ +||+||++|++++++.+ ..
T Consensus 68 g~~~~dE~~~~l~h~~~G~lsma~~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv-~G~dvv~~I~~~~~~~~~~~---- 142 (161)
T 2ok3_A 68 GKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVI-DGLETLDELEKLPVNEKTYR---- 142 (161)
T ss_dssp SSCBCCCCCTTCCSCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE-ECHHHHHHHHTCCBCTTTCC----
T ss_pred CCccccccCcCcCcCCCeEEEEecCCCCCcceEEEEEcCCCCccCCCEeEEEEEe-CCHHHHHHHHhCCccCCCCC----
Confidence 77666543334567789999999954 899999999999999999999999 99999999999999864 32
Q ss_pred eeeeeCCeeEEEEEecC
Q 019630 317 VSVLEKPIPLRFRRIST 333 (338)
Q Consensus 317 v~vl~~pv~i~~~ri~~ 333 (338)
+.+||.|+..+|..
T Consensus 143 ---P~~~v~I~~~~i~~ 156 (161)
T 2ok3_A 143 ---PLNDVHIKDITIHA 156 (161)
T ss_dssp ---BSSCCBEEEEEEEC
T ss_pred ---cCCCeEEEEEEEec
Confidence 34566666655543
No 2
>2fu0_A Cyclophilin, putative; PFE0505W, cyclosporin-binding domain, structura genomics, structural genomics consortium, SGC, unknown FUNC; 1.80A {Plasmodium falciparum} SCOP: b.62.1.1
Probab=100.00 E-value=8.4e-37 Score=268.58 Aligned_cols=150 Identities=19% Similarity=0.157 Sum_probs=122.5
Q ss_pred ceEEEEEEeeeeEEEEecCCCChHHHHHHHHHHhCCCCCCcEEEEeeeCCccccCCCCcccCCCCccCCCccccCCCccc
Q 019630 162 EGIVRLETEYGTLHVKLLPDSAPLSVAYMLELLASRHCVGCQFHRAESRGTHWDTEGNHIENAPGGYGPPFALIQGSLET 241 (338)
Q Consensus 162 ~~~V~l~T~~G~I~IeL~~d~AP~tv~nFl~L~~~g~YdG~~F~Rv~~~~q~GDp~g~~ik~~~~~~G~p~~liqGg~~~ 241 (338)
...|+|+|+.|+|+||||++.||+||+||++||+.|||+|+.|||++++ +++|.|+|.....|+.++
T Consensus 5 ~~~v~~~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~fhRvi~~-------------f~iQgGd~~~~g~gg~si 71 (160)
T 2fu0_A 5 PKSAIIYTTMGDIHISLFYKECKKTVQNFSVHSINGYYNNCIFHRVIKH-------------FMVQTGDPSGDGTGGESI 71 (160)
T ss_dssp CCEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBCCEEETT-------------TEEEECCTTSSSSCCCCT
T ss_pred CCEEEEEecCccEEEEEeCCCChHHHHHHHHHhccCccCCCEEEEEECC-------------CEEEeCCcCCCCCCCCcc
Confidence 5689999999999999999999999999999999999999999999655 444444444344556667
Q ss_pred CCCcCCCcCccccCCCCCceEeeeCC-----CCeEEEEcCCCCCCCCCceEEEEEEcccHHHHHHHhcCCCCCcccccee
Q 019630 242 HSITFKEIPLEVCSTIRRGSVAWVGS-----GPEFFISLANHNEWKKVYTVFGIVLPEDMAIAERIARLPTKQEVWSNVN 316 (338)
Q Consensus 242 ~g~~~~~i~~E~~~~~~rG~Vsma~s-----GsqFFItL~d~p~ldg~ytVFG~Vi~eGmdvLdkI~~~~t~~~~~~~i~ 316 (338)
|+..++++....++|.++|+||||++ +|||||++.+.++||++|+|||+|+ +||+||++|++++++.+..
T Consensus 72 ~g~~~~dE~~~~l~h~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv-~G~dvv~~I~~~~t~~~~~---- 146 (160)
T 2fu0_A 72 WGNEFEDEFFDHLNHSKPFMVSMANCGPNTNGSQFFITTVPCPWLDFKHTVFGKVT-QGSKIVLDIEKVRTDKRDK---- 146 (160)
T ss_dssp TSSCBCCCCBTTBCSSSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE-ECHHHHHHHHTSCBCTTSC----
T ss_pred cCCCccccccCCcccCCceEEEEecCCCCCcccEEEEECCCCCccCCCcEEEEEEE-cCHHHHHHHHhCCcCCCCC----
Confidence 77666544332356678999999995 4899999999999999999999999 9999999999999985433
Q ss_pred eeeeeCCeeEEEEEec
Q 019630 317 VSVLEKPIPLRFRRIS 332 (338)
Q Consensus 317 v~vl~~pv~i~~~ri~ 332 (338)
+.+||.|+..++.
T Consensus 147 ---P~~~v~I~~~~v~ 159 (160)
T 2fu0_A 147 ---PLEDIKILNIKIN 159 (160)
T ss_dssp ---BSSCCBEEEEEEC
T ss_pred ---cCCCeEEEEEEEe
Confidence 4567777766653
No 3
>2x7k_A Peptidyl-prolyl CIS-trans isomerase-like 1; isomerase-immunosuppressant complex, immunosuppressant; HET: MLE MVA BMT ABA SAR; 1.15A {Homo sapiens} PDB: 1xwn_A
Probab=100.00 E-value=1.7e-36 Score=268.13 Aligned_cols=150 Identities=21% Similarity=0.208 Sum_probs=123.4
Q ss_pred CceEEEEEEeeeeEEEEecCCCChHHHHHHHHHHhCCCCCCcEEEEeeeCCccccCCCCcccCCCCccCCCccccCCCcc
Q 019630 161 GEGIVRLETEYGTLHVKLLPDSAPLSVAYMLELLASRHCVGCQFHRAESRGTHWDTEGNHIENAPGGYGPPFALIQGSLE 240 (338)
Q Consensus 161 ~~~~V~l~T~~G~I~IeL~~d~AP~tv~nFl~L~~~g~YdG~~F~Rv~~~~q~GDp~g~~ik~~~~~~G~p~~liqGg~~ 240 (338)
..+.|.|+|+.|+|+||||++.||+||+||++||+.|||+|+.||||+++ +++|.|+|.....|+.+
T Consensus 10 ~~~~v~l~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~fhRvi~~-------------f~iQgGd~~~~g~gg~s 76 (166)
T 2x7k_A 10 QPPNVYLETSMGIIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRIIKD-------------FMIQGGDPTGTGRGGAS 76 (166)
T ss_dssp CCSEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHHTTTTTEECCEEETT-------------TEEEECCTTSSSSCCCC
T ss_pred CCCEEEEEeCCCcEEEEEccCCCCHHHHHHHHHHhcCCCCCCEEEEEECC-------------CEEEcCCCCCCCCCCCc
Confidence 34789999999999999999999999999999999999999999999544 44555555444556666
Q ss_pred cCCCcCCCcCccccCCCCCceEeeeCC-----CCeEEEEcCCCCCCCCCceEEEEEEcccHHHHHHHhcCCCCCccccce
Q 019630 241 THSITFKEIPLEVCSTIRRGSVAWVGS-----GPEFFISLANHNEWKKVYTVFGIVLPEDMAIAERIARLPTKQEVWSNV 315 (338)
Q Consensus 241 ~~g~~~~~i~~E~~~~~~rG~Vsma~s-----GsqFFItL~d~p~ldg~ytVFG~Vi~eGmdvLdkI~~~~t~~~~~~~i 315 (338)
+++..++++....++|.++|+||||++ ||||||++++.++||++|+|||+|+ +||+||++|++++++.+..
T Consensus 77 i~g~~~~dE~~~~l~h~~~G~lsmAn~gp~s~gSQFfI~~~~~~~Ldg~~tvFG~Vv-~G~dvv~~I~~~~t~~~~~--- 152 (166)
T 2x7k_A 77 IYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVC-QGIGMVNRVGMVETNSQDR--- 152 (166)
T ss_dssp TTSSCBCCCCCTTSCCCSTTEEEECBSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE-ECHHHHHHHTTSCBCTTSC---
T ss_pred cCCCccccccccccCCCCCeEEEEeeCCCCCccceEEEECCCCCccCCCeeEEEEEE-cCHHHHHHHHcCCcCCCCC---
Confidence 777776654333456678999999985 4899999999999999999999999 9999999999999987533
Q ss_pred eeeeeeCCeeEEEEEe
Q 019630 316 NVSVLEKPIPLRFRRI 331 (338)
Q Consensus 316 ~v~vl~~pv~i~~~ri 331 (338)
+.+||.|+..+|
T Consensus 153 ----P~~~i~I~~~~i 164 (166)
T 2x7k_A 153 ----PVDDVKIIKAYP 164 (166)
T ss_dssp ----BSSCCEEEEEEE
T ss_pred ----cCCCeEEEEEEE
Confidence 446677766554
No 4
>2a2n_A Peptidylprolyl isomerase domain and WD repeat CON; CIS-trans isomerization, protein-folding, peptidylprolyl ISO structural genomics; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=3.5e-36 Score=268.46 Aligned_cols=152 Identities=19% Similarity=0.208 Sum_probs=123.6
Q ss_pred CCCceEEEEEEeeeeEEEEecCCCChHHHHHHHHHHhCCCCCCcEEEEeeeCCccccCCCCcccCCCCccCCCccccCCC
Q 019630 159 GKGEGIVRLETEYGTLHVKLLPDSAPLSVAYMLELLASRHCVGCQFHRAESRGTHWDTEGNHIENAPGGYGPPFALIQGS 238 (338)
Q Consensus 159 ~~~~~~V~l~T~~G~I~IeL~~d~AP~tv~nFl~L~~~g~YdG~~F~Rv~~~~q~GDp~g~~ik~~~~~~G~p~~liqGg 238 (338)
.+....|+++|+.|+|+|+||++.||+||+||++||+.|||+|+.||||+++ +++|.|+|.....|+
T Consensus 18 ~~~~~~v~~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~-------------f~iQgGd~~~~g~gg 84 (176)
T 2a2n_A 18 KRVSDSAIIHTSMGDIHTKLFPVECPKTVENFCVHSRNGYYNGHTFHRIIKG-------------FMIQTGDPTGTGMGG 84 (176)
T ss_dssp CCCCSEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBCCEEETT-------------TEEEECCTTSSSSCC
T ss_pred CCCCCEEEEEecCccEEEEEeCCCChHHHHHHHHHhhcCccCCCEEEEEECC-------------cEEEccCCCCCCCCC
Confidence 3456789999999999999999999999999999999999999999999554 444444444344556
Q ss_pred cccCCCcCCCcCccccCCCCCceEeeeCC-----CCeEEEEcCCCCCCCCCceEEEEEEcccHHHHHHHhcCCCCC-ccc
Q 019630 239 LETHSITFKEIPLEVCSTIRRGSVAWVGS-----GPEFFISLANHNEWKKVYTVFGIVLPEDMAIAERIARLPTKQ-EVW 312 (338)
Q Consensus 239 ~~~~g~~~~~i~~E~~~~~~rG~Vsma~s-----GsqFFItL~d~p~ldg~ytVFG~Vi~eGmdvLdkI~~~~t~~-~~~ 312 (338)
.++|+..|+++....++|.++|+||||++ ||||||++.+.++||++|+|||+|+ +||+||++|++++++. +.
T Consensus 85 ~si~g~~~~dE~~~~l~h~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv-~Gmdvv~~I~~~~t~~~~~- 162 (176)
T 2a2n_A 85 ESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVT-KGMEVVQRISNVKVNPKTD- 162 (176)
T ss_dssp CCTTSSCBCCCCCTTCCSCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE-ECHHHHHHHHTSCBCTTTC-
T ss_pred CcccCCccccccccccccCCceEEEEEeCCCCCcccEEEEECCCCCccCCCeeEEEEEe-CCHHHHHHHHcCCccCCCC-
Confidence 66777666544332356678999999995 4899999999999999999999999 9999999999999983 22
Q ss_pred cceeeeeeeCCeeEEEEEe
Q 019630 313 SNVNVSVLEKPIPLRFRRI 331 (338)
Q Consensus 313 ~~i~v~vl~~pv~i~~~ri 331 (338)
.+.+||.|+..++
T Consensus 163 ------~P~~~v~I~~v~v 175 (176)
T 2a2n_A 163 ------KPYEDVSIINITV 175 (176)
T ss_dssp ------CBSSCCBEEEEEE
T ss_pred ------ccCCCeEEEEEEE
Confidence 3456777777665
No 5
>2poe_A Cyclophilin-like protein, putative; cryptosporidium parvum cyclophilin isomerase, structural genomics; 2.01A {Cryptosporidium parvum iowa II} PDB: 2qer_A
Probab=100.00 E-value=5.7e-36 Score=269.01 Aligned_cols=152 Identities=20% Similarity=0.233 Sum_probs=122.4
Q ss_pred CCceEEEEEEeeeeEEEEecCCCChHHHHHHHHHHhCCCCCCcEEEEeeeCCccccCCCCcccCCCCccCCCccccCCCc
Q 019630 160 KGEGIVRLETEYGTLHVKLLPDSAPLSVAYMLELLASRHCVGCQFHRAESRGTHWDTEGNHIENAPGGYGPPFALIQGSL 239 (338)
Q Consensus 160 ~~~~~V~l~T~~G~I~IeL~~d~AP~tv~nFl~L~~~g~YdG~~F~Rv~~~~q~GDp~g~~ik~~~~~~G~p~~liqGg~ 239 (338)
+..+.|.|+|+.|+|+||||++.||+||+||++||+.|||+|+.||||+++ +++|.|+|.....|+.
T Consensus 14 ~~~~~v~i~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~-------------f~iQgGd~~~~g~gg~ 80 (185)
T 2poe_A 14 LYFQGVRIITNYGDLKFELFCSQCPKACKNFLALSASGYYKNTIFHKNIKG-------------FIIQGGDPTGTGKGGE 80 (185)
T ss_dssp -CCCEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTEEEEEECTT-------------SEEEEEETTSSSSCCC
T ss_pred CCceEEEEEecCccEEEEEeCCCCcHHHHHHHHHhccCCCCCCEEEEEECC-------------CEEEcCCCCCCCCCCC
Confidence 446789999999999999999999999999999999999999999999554 4444444444445666
Q ss_pred ccCCCcCCCcCccccCCCCCceEeeeCCC---------CeEEEEcCCCCCCCCCceEEEEEEcccHHHHHHHhcCCCCCc
Q 019630 240 ETHSITFKEIPLEVCSTIRRGSVAWVGSG---------PEFFISLANHNEWKKVYTVFGIVLPEDMAIAERIARLPTKQE 310 (338)
Q Consensus 240 ~~~g~~~~~i~~E~~~~~~rG~Vsma~sG---------sqFFItL~d~p~ldg~ytVFG~Vi~eGmdvLdkI~~~~t~~~ 310 (338)
++|+..++++....++|.++|+|||||+| |||||++++.++||++|+|||+|+ +||+||++|++++++.+
T Consensus 81 si~g~~~~dE~~~~l~h~~~G~lsmA~~g~~~~p~s~gSQFFIt~~~~~~LDg~~tVFG~Vv-~Gmdvv~~I~~~~t~~~ 159 (185)
T 2poe_A 81 SIYGRYFDDEIYPELKYDRRGILSMASKGASKKPNTNGSQFFITYSSLPQLNGEYVIFGKLI-DGFETLNTLENCPSDKS 159 (185)
T ss_dssp BTTBSCBCCCCCTTSCCCSTTEEEECCSCC-CCCSCBCSCEEEESSCCGGGTTTSCEEEEEE-ECHHHHHHHHHSCBCTT
T ss_pred ccCCCcccccccCCCccCCCeEEEEecCCCCCCCCCccceEEEECCCCCccCCCeeEEEEEe-CCHHHHHHHHhCCcCCC
Confidence 77777766553344566789999999865 799999999999999999999999 99999999999999764
Q ss_pred cccceeeeeeeCCeeEEEEEec
Q 019630 311 VWSNVNVSVLEKPIPLRFRRIS 332 (338)
Q Consensus 311 ~~~~i~v~vl~~pv~i~~~ri~ 332 (338)
.. +.+||.|+..++-
T Consensus 160 ~~-------P~~~v~I~~~~i~ 174 (185)
T 2poe_A 160 HK-------PIDEIIIKDIVIH 174 (185)
T ss_dssp SC-------BSSCCEEEEEEEE
T ss_pred CC-------cCCCeEEEEEEEE
Confidence 33 3345555544443
No 6
>2b71_A Cyclophilin-like protein; structural genomics, structural genomics consortium, SGC, isomerase; 2.50A {Plasmodium yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=7.3e-36 Score=270.48 Aligned_cols=152 Identities=18% Similarity=0.163 Sum_probs=123.9
Q ss_pred CceEEEEEEeeeeEEEEecCCCChHHHHHHHHHHhCCCCCCcEEEEeeeCCccccCCCCcccCCCCccCCCccccCCCcc
Q 019630 161 GEGIVRLETEYGTLHVKLLPDSAPLSVAYMLELLASRHCVGCQFHRAESRGTHWDTEGNHIENAPGGYGPPFALIQGSLE 240 (338)
Q Consensus 161 ~~~~V~l~T~~G~I~IeL~~d~AP~tv~nFl~L~~~g~YdG~~F~Rv~~~~q~GDp~g~~ik~~~~~~G~p~~liqGg~~ 240 (338)
..+.|.|+|+.|+|+|+||++.||+||+||++||+.|||+|+.||||+++ +++|.|+|.....|+.+
T Consensus 37 ~~~~V~l~T~~G~I~ieL~~~~aP~tv~NF~~L~~~g~Y~g~~FhRVi~~-------------f~iQgGd~~~~g~gg~s 103 (196)
T 2b71_A 37 ERGYITIYTNLGDFEVELYWYHSPKTCLNFYTLCEMGFYDNTIFHRVIPN-------------FVIQGGDPTGTGKGGKS 103 (196)
T ss_dssp HSCEEEEEETTEEEEEEECTTTSHHHHHHHHHHHHTTTTTTEEEEEEETT-------------TEEEEEETTSSSSCCCB
T ss_pred CCcEEEEEeCCCCEEEEEeCCCCcHHHHHHHHHhhcCCcCCCEEEEEeCC-------------cEEEcCCCCCCCCCCCc
Confidence 46789999999999999999999999999999999999999999999655 44444444434456666
Q ss_pred cCCCcCCCcCccccCCCCCceEeeeCC-----CCeEEEEcCCCCCCCCCceEEEEEEcccHHHHHHHhcCCCCCccccce
Q 019630 241 THSITFKEIPLEVCSTIRRGSVAWVGS-----GPEFFISLANHNEWKKVYTVFGIVLPEDMAIAERIARLPTKQEVWSNV 315 (338)
Q Consensus 241 ~~g~~~~~i~~E~~~~~~rG~Vsma~s-----GsqFFItL~d~p~ldg~ytVFG~Vi~eGmdvLdkI~~~~t~~~~~~~i 315 (338)
+++..++++.+..++|.++|+||||++ ||||||++++.++||++|+|||+|+ +||+||++|++++++.+..
T Consensus 104 i~g~~~~dE~~~~l~h~~~G~lsMAn~gpns~gSQFFIt~~~~~~LDg~~tVFG~Vv-~Gmdvv~~I~~~~t~~~~~--- 179 (196)
T 2b71_A 104 IYGEYFEDEINKELKHTGAGILSMSNNGPNTNSSQFFITLAPLPHLDGKHTIFARVS-KNMTCIENIASVQTTATNK--- 179 (196)
T ss_dssp TTBSCBCCCCCTTCCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEE-ECHHHHHHHHTSCBCTTCC---
T ss_pred cCCCcccccccCCcCcCCCeEEEEccCCCCCcccEEEEECCCCCccCCCEeEEEEEe-cCHHHHHHHHhCCcCCCCC---
Confidence 777776655444466778999999985 4899999999999999999999999 9999999999999976533
Q ss_pred eeeeeeCCeeEEEEEecC
Q 019630 316 NVSVLEKPIPLRFRRIST 333 (338)
Q Consensus 316 ~v~vl~~pv~i~~~ri~~ 333 (338)
+.+||.|+..+|..
T Consensus 180 ----P~~~i~I~~~~i~~ 193 (196)
T 2b71_A 180 ----PIFDLKILRTSTAV 193 (196)
T ss_dssp ----BSSCCEEEEEEC--
T ss_pred ----CCCCeEEEEEEEec
Confidence 44667776666543
No 7
>3bo7_A Peptidyl-prolyl CIS-trans isomerase cyclophilin-T; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, structural G structural genomics consortium, SGC; HET: BMT; 2.35A {Toxoplasma gondii}
Probab=100.00 E-value=8.9e-36 Score=270.90 Aligned_cols=157 Identities=19% Similarity=0.241 Sum_probs=116.6
Q ss_pred CCceEEEEEEeeeeEEEEecCCCChHHHHHHHHHHhCCCCCCcEEEEeeeCC--ccc-----cCCCCcccCCCCccCCCc
Q 019630 160 KGEGIVRLETEYGTLHVKLLPDSAPLSVAYMLELLASRHCVGCQFHRAESRG--THW-----DTEGNHIENAPGGYGPPF 232 (338)
Q Consensus 160 ~~~~~V~l~T~~G~I~IeL~~d~AP~tv~nFl~L~~~g~YdG~~F~Rv~~~~--q~G-----Dp~g~~ik~~~~~~G~p~ 232 (338)
+....|+|+|+.|+|+|+||++.||+||+||++||+.|||+|+.||||++++ |+| ||++
T Consensus 4 ~~~~~v~l~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Ydg~~FhRvi~~f~iQgG~~~~~Dp~~-------------- 69 (201)
T 3bo7_A 4 KKKGYLRIVTTQGSLNIELHADMAPRACDSFLRLCAVKYFDDTIFHRCIRNFMIQGGRAELRQPSK-------------- 69 (201)
T ss_dssp -CCEEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBEEEEETTTEEEECCGGGCCC----------------
T ss_pred CCceEEEEEeCCCCEEEEEcCCCCcHHHHHHHHHHhcCccCCCEEEEeeCCCEEEcCcccccCCCC--------------
Confidence 3467899999999999999999999999999999999999999999996553 555 5443
Q ss_pred cccCCCcccC-------CCcCCCcCccccCCCCCceEeeeCC-----CCeEEEEcCCCCCCCCCceEEEEEEcccHHHHH
Q 019630 233 ALIQGSLETH-------SITFKEIPLEVCSTIRRGSVAWVGS-----GPEFFISLANHNEWKKVYTVFGIVLPEDMAIAE 300 (338)
Q Consensus 233 ~liqGg~~~~-------g~~~~~i~~E~~~~~~rG~Vsma~s-----GsqFFItL~d~p~ldg~ytVFG~Vi~eGmdvLd 300 (338)
...|+.++| +..|+++.+..+.|.++|+||||++ ||||||++.+.++||++|+|||+|+ +||+||+
T Consensus 70 -~g~gg~si~~~~~~~~g~~f~dE~~~~l~h~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv-~Gmdvv~ 147 (201)
T 3bo7_A 70 -KKEVQQSPRSISGFPGGAPFEDEFDNRLVHQGIGVLSMANDGKHSNLSEFFITFKSCEHLNNKHTIFGRVV-GGLDVLR 147 (201)
T ss_dssp ------CCSSCCCSSTTCCCBCCCCCTTCCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEE-ECHHHHH
T ss_pred -CCCCCccccccccccCCCcccCcccCCCCcCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCceEEEEEe-cCHHHHH
Confidence 334444444 4455443333455678999999995 4899999999999999999999999 9999999
Q ss_pred HHhcCCCCCccc--cce---eeeeeeCCeeEEEEEec
Q 019630 301 RIARLPTKQEVW--SNV---NVSVLEKPIPLRFRRIS 332 (338)
Q Consensus 301 kI~~~~t~~~~~--~~i---~v~vl~~pv~i~~~ri~ 332 (338)
+|++++++.+.+ ..| .+.++.+|+.-...|+.
T Consensus 148 ~I~~~~t~~~~~P~~~i~I~~~~v~~dPf~d~~~~~~ 184 (201)
T 3bo7_A 148 QWEKLETDKKDKPLKPPKVEEIIVFKNPFEDARKEME 184 (201)
T ss_dssp HHTTCCBCTTSCBSSCCBEEEEEEEECCC--------
T ss_pred HHHhCCcCCCCCcCCCeEEEEEEEEcCCccCHHHHHH
Confidence 999999986433 222 35677788776655544
No 8
>1zkc_A Peptidyl-prolyl CIS-trans isomerase like 2; CIS-trans isomerization, peptidylprolyl isomerase, protein- folding, structural genomics consortium; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=1.1e-35 Score=269.51 Aligned_cols=138 Identities=24% Similarity=0.311 Sum_probs=117.0
Q ss_pred CCCceEEEEEEeeeeEEEEecCCCChHHHHHHHHHHhCCCCCCcEEEEeeeCCccccCCCCcccCCCCccCCCccccCCC
Q 019630 159 GKGEGIVRLETEYGTLHVKLLPDSAPLSVAYMLELLASRHCVGCQFHRAESRGTHWDTEGNHIENAPGGYGPPFALIQGS 238 (338)
Q Consensus 159 ~~~~~~V~l~T~~G~I~IeL~~d~AP~tv~nFl~L~~~g~YdG~~F~Rv~~~~q~GDp~g~~ik~~~~~~G~p~~liqGg 238 (338)
.+....|+|+|+.|+|+|+||++.||+||+||++||+.|||+|+.||||+++ +++|.|+|.....|+
T Consensus 16 ~~~~~~v~l~T~~G~I~ieL~~~~aP~tv~NF~~L~~~g~Ydg~~FhRVi~~-------------f~iQgGd~~~~g~Gg 82 (197)
T 1zkc_A 16 PRGSGYVRLHTNKGDLNLELHCDLTPKTCENFIRLCKKHYYDGTIFHRSIRN-------------FVIQGGDPTGTGTGG 82 (197)
T ss_dssp CCSCEEEEEEETTEEEEEEECTTTSHHHHHHHHHHHHTTTTTTEEEEEEETT-------------TEEEECCTTSSSSCC
T ss_pred CCCCcEEEEEeCCccEEEEEcCCCCcHHHHHHHHHHhcCCCCCCEEEEEeCC-------------CEEEcCCCCCCCCCC
Confidence 3556889999999999999999999999999999999999999999999544 445555554444566
Q ss_pred cccCCCcCCCcCccccCCCCCceEeeeCC-----CCeEEEEcCCCCCCCCCceEEEEEEcccHHHHHHHhcCCCCCc
Q 019630 239 LETHSITFKEIPLEVCSTIRRGSVAWVGS-----GPEFFISLANHNEWKKVYTVFGIVLPEDMAIAERIARLPTKQE 310 (338)
Q Consensus 239 ~~~~g~~~~~i~~E~~~~~~rG~Vsma~s-----GsqFFItL~d~p~ldg~ytVFG~Vi~eGmdvLdkI~~~~t~~~ 310 (338)
.++|+..|+++.+..+.|.++|+|||||+ ||||||++.+.++||++|+|||+|+ +||+||++|++++++.+
T Consensus 83 ~si~g~~f~dE~~~~l~h~~~G~lsMAn~gp~sngSQFFIt~~~~~~LDg~~tVFG~Vv-~Gmdvv~~I~~~~t~~~ 158 (197)
T 1zkc_A 83 ESYWGKPFKDEFRPNLSHTGRGILSMANSGPNSNRSQFFITFRSCAYLDKKHTIFGRVV-GGFDVLTAMENVESDPK 158 (197)
T ss_dssp CBTTBSCBCCCCCTTCCSCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE-ECHHHHHHHHHSCBCTT
T ss_pred CccCCCccccccCcCcCCCCceEEEEecCCCCCcccEEEEEcCCCCccCCCccEEEEEE-cCHHHHHHHHcCCCCCC
Confidence 66777776654334456778999999995 4899999999999999999999999 99999999999999864
No 9
>2k7n_A Peptidyl-prolyl CIS-trans isomerase-like 1; beta barrel, disorder-order transition, HOOK-like, mRNA processing, mRNA splicing, rotamase; NMR {Homo sapiens}
Probab=100.00 E-value=1.8e-35 Score=269.23 Aligned_cols=152 Identities=21% Similarity=0.207 Sum_probs=124.8
Q ss_pred CceEEEEEEeeeeEEEEecCCCChHHHHHHHHHHhCCCCCCcEEEEeeeCCccccCCCCcccCCCCccCCCccccCCCcc
Q 019630 161 GEGIVRLETEYGTLHVKLLPDSAPLSVAYMLELLASRHCVGCQFHRAESRGTHWDTEGNHIENAPGGYGPPFALIQGSLE 240 (338)
Q Consensus 161 ~~~~V~l~T~~G~I~IeL~~d~AP~tv~nFl~L~~~g~YdG~~F~Rv~~~~q~GDp~g~~ik~~~~~~G~p~~liqGg~~ 240 (338)
..+.|.|+|+.|+|+||||++.||+||+||++||+.+||+|+.||||+++ +++|.|+|.....|+.+
T Consensus 10 ~~~~V~l~T~~G~I~ieL~~d~aP~tv~NF~~L~~~g~Ydg~~FhRVi~~-------------F~iQgGd~~~~g~gg~s 76 (203)
T 2k7n_A 10 QPPNVYLETSMGIIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRIIKD-------------FMIQGGDPTGTGRGGAS 76 (203)
T ss_dssp CCSEEEEEESSCEEEEEECTTTCTTHHHHHHHHHHHTCGGGCEEEEEETT-------------TEEEEECSSSSSSCCCT
T ss_pred CCCEEEEEeCCCcEEEEEccCCCcHHHHHHHHHHhcCccCCCEEEEEeCC-------------cEEEcCCCCCCCCCCCc
Confidence 34789999999999999999999999999999999999999999999554 44444444444456666
Q ss_pred cCCCcCCCcCccccCCCCCceEeeeCCC-----CeEEEEcCCCCCCCCCceEEEEEEcccHHHHHHHhcCCCCCccccce
Q 019630 241 THSITFKEIPLEVCSTIRRGSVAWVGSG-----PEFFISLANHNEWKKVYTVFGIVLPEDMAIAERIARLPTKQEVWSNV 315 (338)
Q Consensus 241 ~~g~~~~~i~~E~~~~~~rG~Vsma~sG-----sqFFItL~d~p~ldg~ytVFG~Vi~eGmdvLdkI~~~~t~~~~~~~i 315 (338)
+++..|+++....++|.++|+|||||+| |||||++.+.++||++|+|||+|+ +||+||++|++++++.+.
T Consensus 77 i~g~~f~dE~~~~l~h~~~G~lsMAn~gpnsngSQFFIt~~~~~~LDg~~tVFG~Vv-eGmdvv~kI~~~~t~~~~---- 151 (203)
T 2k7n_A 77 IYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVC-QGIGMVNRVGMVETNSQD---- 151 (203)
T ss_dssp TSCSCBCCCCCCSSCCCSSCEEEEEESSTTCEEEEEEEESSCCCSSTTTSCEEEEEE-SCHHHHHHHHSCCEEETT----
T ss_pred cCCCcccccccccccCCCCeEEEEeeCCCCCcccEEEEEcCCCCccCCCeeEEEEEE-cCHHHHHHHHcCCcCCCC----
Confidence 7777666543334567789999999864 799999999999999999999999 999999999999987643
Q ss_pred eeeeeeCCeeEEEEEecC
Q 019630 316 NVSVLEKPIPLRFRRIST 333 (338)
Q Consensus 316 ~v~vl~~pv~i~~~ri~~ 333 (338)
.+.+||.|+...+-.
T Consensus 152 ---~P~~~V~I~~~~v~~ 166 (203)
T 2k7n_A 152 ---RPVDDVKIIKAYPSG 166 (203)
T ss_dssp ---EECCCCBEEEEEECC
T ss_pred ---CcCCCeEEEEEEEEe
Confidence 355777787766654
No 10
>1w74_A Peptidyl-prolyl CIS-trans isomerase A; cyclophilin, ppiase, RV0009, rotamase, structural proteomics in europe, spine; 2.6A {Mycobacterium tuberculosis} SCOP: b.62.1.1
Probab=100.00 E-value=1.3e-34 Score=261.33 Aligned_cols=148 Identities=21% Similarity=0.281 Sum_probs=116.8
Q ss_pred cCCCceEEEEEEeeeeEEEEecCCCChHHHHHHHHHH---------------hCCCCCCcEEEEeeeCC--ccccCCCCc
Q 019630 158 FGKGEGIVRLETEYGTLHVKLLPDSAPLSVAYMLELL---------------ASRHCVGCQFHRAESRG--THWDTEGNH 220 (338)
Q Consensus 158 ~~~~~~~V~l~T~~G~I~IeL~~d~AP~tv~nFl~L~---------------~~g~YdG~~F~Rv~~~~--q~GDp~g~~ 220 (338)
.+.....|+|+|+.|+|+|+||++.||+||+||++|| +.+||+|+.||||++++ |+||++++
T Consensus 19 ~~~~~~~v~l~t~~G~I~ieL~~~~aP~tv~NF~~L~tG~~~~~~~~~g~~~~~~~Y~g~~FhRVi~~fmiQgGd~~g~- 97 (191)
T 1w74_A 19 SPLATATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPTGT- 97 (191)
T ss_dssp --CCSEEEEEEETTEEEEEEECTTTSHHHHHHHHHHHHTCSCCSSCCTTBSSSSCSSTTEEEEEEETTTEEEECCTTSS-
T ss_pred CCCCCeEEEEEecceeEEEEEcCCCChHHHHHHHHHhcCCcccccccccccccCCccCCCEEEEEeCCCEEecCCCCCC-
Confidence 4455689999999999999999999999999999999 46899999999996553 55555432
Q ss_pred ccCCCCccCCCccccCCCcccCCCcCCCcCccccCCCCCceEeeeCC-----CCeEEEEcCCCCCCCCCceEEEEEEcc-
Q 019630 221 IENAPGGYGPPFALIQGSLETHSITFKEIPLEVCSTIRRGSVAWVGS-----GPEFFISLANHNEWKKVYTVFGIVLPE- 294 (338)
Q Consensus 221 ik~~~~~~G~p~~liqGg~~~~g~~~~~i~~E~~~~~~rG~Vsma~s-----GsqFFItL~d~p~ldg~ytVFG~Vi~e- 294 (338)
..|+ ++..|+++.+..++|.++|+|||||+ ||||||++.+.++||++|+|||+|+ +
T Consensus 98 --------------G~gg---~g~~f~dE~~~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv-~~ 159 (191)
T 1w74_A 98 --------------GRGG---PGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIFGEVI-DA 159 (191)
T ss_dssp --------------SSCC---SSCCBCCCCCTTCCSCSSSEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEC-SH
T ss_pred --------------CCCC---CCCccccccccCCCcCCCcEEEEeeCCCCCccceEEEEcCCCcccCCCeeEEEEEE-EC
Confidence 2333 34455443333456778999999995 4899999999999999999999999 8
Q ss_pred -cHHHHHHHhcCCCCCccccceeeeeeeCCeeEEEEEe
Q 019630 295 -DMAIAERIARLPTKQEVWSNVNVSVLEKPIPLRFRRI 331 (338)
Q Consensus 295 -GmdvLdkI~~~~t~~~~~~~i~v~vl~~pv~i~~~ri 331 (338)
||+||++|++++++.+.. +.+||.|+...|
T Consensus 160 ~Gmdvv~~I~~~~t~~~~~-------P~~~v~I~~~~i 190 (191)
T 1w74_A 160 ESQRVVEAISKTATDGNDR-------PTDPVVIESITI 190 (191)
T ss_dssp HHHHHHHHHHTSCBCTTSC-------BSSCCEEEEEEE
T ss_pred CCHHHHHHHHcCCcCCCCC-------cCCCeEEEEEEE
Confidence 999999999999976533 445666665544
No 11
>3s6m_A Peptidyl-prolyl CIS-trans isomerase; seattle structural genomics center for infectious disease; 1.65A {Burkholderia pseudomallei} SCOP: b.62.1.1 PDB: 3t1u_A*
Probab=100.00 E-value=6.4e-35 Score=257.91 Aligned_cols=149 Identities=19% Similarity=0.248 Sum_probs=114.8
Q ss_pred CceEEEEEEeeeeEEEEecCCCChHHHHHHHHHHhCCCCCCcEEEEeeeCC--ccccCCCCcccCCCCccCCCccccCCC
Q 019630 161 GEGIVRLETEYGTLHVKLLPDSAPLSVAYMLELLASRHCVGCQFHRAESRG--THWDTEGNHIENAPGGYGPPFALIQGS 238 (338)
Q Consensus 161 ~~~~V~l~T~~G~I~IeL~~d~AP~tv~nFl~L~~~g~YdG~~F~Rv~~~~--q~GDp~g~~ik~~~~~~G~p~~liqGg 238 (338)
+.+.|+|+|+.|+|+||||++.||+||+||++||+.+||+|+.||||++++ |+||+++. ++
T Consensus 2 p~~~v~l~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~-----------------~~ 64 (167)
T 3s6m_A 2 PGSMVELHTNHGVIKLELDEAKAPKTVENFLNYVKKGHYDGTIFHRVINGFMIQGGGFEPG-----------------LK 64 (167)
T ss_dssp CCCEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHHTTTTTEECCEEETTTEEEESSEETT-----------------TE
T ss_pred CCcEEEEEeCCceEEEEEeCCCCcHHHHHHHHHhhhcccCCCEeEEecCCcEEEeccccCC-----------------CC
Confidence 467899999999999999999999999999999999999999999996653 66655432 11
Q ss_pred cccCCCcCCCcCccccCCCCCceEeeeC-C-----CCeEEEEcCCCCCCCCC--------ceEEEEEEcccHHHHHHHhc
Q 019630 239 LETHSITFKEIPLEVCSTIRRGSVAWVG-S-----GPEFFISLANHNEWKKV--------YTVFGIVLPEDMAIAERIAR 304 (338)
Q Consensus 239 ~~~~g~~~~~i~~E~~~~~~rG~Vsma~-s-----GsqFFItL~d~p~ldg~--------ytVFG~Vi~eGmdvLdkI~~ 304 (338)
...++..++++... ..++.+|+||||| + ||||||++.+.++||++ |+|||+|+ +||+||++|++
T Consensus 65 ~~~~~~~~~~E~~~-~l~~~~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~~~~~VFG~Vv-~G~dvv~~I~~ 142 (167)
T 3s6m_A 65 QKPTDAPIANEANN-GLKNDTYTIAMARTNDPHSATAQFFINVNDNEFLNHSSPTPQGWGYAVFGKVV-EGQDIVDKIKA 142 (167)
T ss_dssp ECCCCCCBCCCGGG-CCCCCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTCCCCEEEEEE-ECHHHHHHHTT
T ss_pred CCCCCCccCCcccc-cccCCccEEEEecCCCCCCccceEEEEcCCchhcCCcccccCCCCceEEEEEE-cCHHHHHHHHc
Confidence 11223333322111 2235899999998 3 48999999999999998 99999999 99999999999
Q ss_pred CCCCCccccceeeeeeeCCeeEEEEEe
Q 019630 305 LPTKQEVWSNVNVSVLEKPIPLRFRRI 331 (338)
Q Consensus 305 ~~t~~~~~~~i~v~vl~~pv~i~~~ri 331 (338)
+++++.... ...+.+||.|+..+|
T Consensus 143 ~~t~~~~~~---~~~P~~~v~I~~~~i 166 (167)
T 3s6m_A 143 VKTGSKGFH---QDVPNDDVVIEKAVV 166 (167)
T ss_dssp SCBBC---C---BTCBSSCCEEEEEEE
T ss_pred CCcCCCccc---CCCcCCCeEEEEEEE
Confidence 999873211 124567777776654
No 12
>1v9t_A Cyclophilin B; beta barrel, isomerase-isomerase inhibitor complex; HET: NIT; 1.70A {Escherichia coli} SCOP: b.62.1.1 PDB: 1j2a_A* 1vai_A* 1clh_A
Probab=100.00 E-value=3.4e-34 Score=253.18 Aligned_cols=149 Identities=24% Similarity=0.319 Sum_probs=119.0
Q ss_pred CCceEEEEEEeeeeEEEEecCCCChHHHHHHHHHHhCCCCCCcEEEEeeeCC--ccccCCCCcccCCCCccCCCccccCC
Q 019630 160 KGEGIVRLETEYGTLHVKLLPDSAPLSVAYMLELLASRHCVGCQFHRAESRG--THWDTEGNHIENAPGGYGPPFALIQG 237 (338)
Q Consensus 160 ~~~~~V~l~T~~G~I~IeL~~d~AP~tv~nFl~L~~~g~YdG~~F~Rv~~~~--q~GDp~g~~ik~~~~~~G~p~~liqG 237 (338)
+++..|.|+|+.|+|+|+||++.||+||+||++||+.|||+|+.||||++++ |+||+++..
T Consensus 2 ~~~~~v~~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~~----------------- 64 (166)
T 1v9t_A 2 KGDPHVLLTTSAGNIELELDKQKAPVSVQNFVDYVNSGFYNNTTFHRVIPGFMIQGGGFTEQM----------------- 64 (166)
T ss_dssp CCSCEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBEEEEETTTEEEESSBCTTC-----------------
T ss_pred CCCeEEEEEeCCccEEEEEcCCCCcHHHHHHHHHhccCCCCCCEEEEEECCcEEEcCCcCcCC-----------------
Confidence 4567899999999999999999999999999999999999999999997664 666665431
Q ss_pred CcccCCCcCCCcCcccc--CCCCCceEeeeCC------CCeEEEEcCCCCCCCCC-----ceEEEEEEcccHHHHHHHhc
Q 019630 238 SLETHSITFKEIPLEVC--STIRRGSVAWVGS------GPEFFISLANHNEWKKV-----YTVFGIVLPEDMAIAERIAR 304 (338)
Q Consensus 238 g~~~~g~~~~~i~~E~~--~~~~rG~Vsma~s------GsqFFItL~d~p~ldg~-----ytVFG~Vi~eGmdvLdkI~~ 304 (338)
+...++..+ ++|.. .++++|+|||||+ ||||||++.+.++||++ |+|||+|+ +||+||++|++
T Consensus 65 ~~~~~g~~~---~dE~~~~l~~~~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~tvFG~Vv-~G~dvv~~I~~ 140 (166)
T 1v9t_A 65 QQKKPNPPI---KNEADNGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVV-KGMDVADKISQ 140 (166)
T ss_dssp CBCCCCCCB---CCCGGGSCCCCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSCCCCCEEEEEE-ECHHHHHHHHT
T ss_pred CCCCCCCcc---cccccccccCCceEEEEeecCCCCCccceEEEEeCCccccCCccCcCCeeEEEEEe-cCHHHHHHHHh
Confidence 111123333 34442 3467999999984 48999999999999998 99999999 99999999999
Q ss_pred CCCCCccccceeeeeeeCCeeEEEEEec
Q 019630 305 LPTKQEVWSNVNVSVLEKPIPLRFRRIS 332 (338)
Q Consensus 305 ~~t~~~~~~~i~v~vl~~pv~i~~~ri~ 332 (338)
++++.... ....+.+||.|+..++.
T Consensus 141 ~~~~~~~~---~~~~P~~~v~I~~~~v~ 165 (166)
T 1v9t_A 141 VPTHDVGP---YQNVPSKPVVILSATVL 165 (166)
T ss_dssp SCEEEETT---EEEEESSCCBEEEEEEC
T ss_pred CCCCCCCc---cCCCcCCCeEEEEEEEe
Confidence 99875321 12467788988877763
No 13
>1lop_A Cyclophilin A; rotamase, isomerase-isomerase inhibitor complex; HET: NIT; 1.80A {Escherichia coli} SCOP: b.62.1.1 PDB: 2nul_A 2rs4_A
Probab=100.00 E-value=2.7e-34 Score=253.41 Aligned_cols=146 Identities=20% Similarity=0.228 Sum_probs=114.3
Q ss_pred EEEEEEeeeeEEEEecCCCChHHHHHHHHHHhCCCCCCcEEEEeeeCCccccCCCCcccCCCCccCCCccccCCCcccCC
Q 019630 164 IVRLETEYGTLHVKLLPDSAPLSVAYMLELLASRHCVGCQFHRAESRGTHWDTEGNHIENAPGGYGPPFALIQGSLETHS 243 (338)
Q Consensus 164 ~V~l~T~~G~I~IeL~~d~AP~tv~nFl~L~~~g~YdG~~F~Rv~~~~q~GDp~g~~ik~~~~~~G~p~~liqGg~~~~g 243 (338)
.|+|+|+.|+|+|+||++.||+||+||++||+.|||+|+.||||+++ +++|.|+|..- .+.+.++
T Consensus 1 ~v~l~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~-------------f~iQgGd~~~~--~g~~~~g 65 (164)
T 1lop_A 1 MVTFHTNHGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRVING-------------FMIQGGGFEPG--MKQKATK 65 (164)
T ss_dssp CEEEEETTEEEEEEECTTTSHHHHHHHHHHHHTTTTTTEECCEEETT-------------TEEEESSEETT--TEECCCC
T ss_pred CEEEEeCCCCEEEEEeCCCCcHHHHHHHHHHhcCCCCCCEEEEEeCC-------------ceEecCCcccC--CCcCCCC
Confidence 37899999999999999999999999999999999999999999554 44444444310 1222344
Q ss_pred CcCCCcCcccc--CCCCCceEeeeCC------CCeEEEEcCCCCCCCCC--------ceEEEEEEcccHHHHHHHhcCCC
Q 019630 244 ITFKEIPLEVC--STIRRGSVAWVGS------GPEFFISLANHNEWKKV--------YTVFGIVLPEDMAIAERIARLPT 307 (338)
Q Consensus 244 ~~~~~i~~E~~--~~~~rG~Vsma~s------GsqFFItL~d~p~ldg~--------ytVFG~Vi~eGmdvLdkI~~~~t 307 (338)
..++ +|.. .++.+|+|||||+ ||||||++.+.++||++ |+|||+|+ +||+||++|+++++
T Consensus 66 ~~~~---dE~~~~l~~~~G~lsmA~~~~p~s~gSQFfI~~~~~~~Ld~~~~~~~~~~~tvFG~Vv-~G~dvv~~I~~~~t 141 (164)
T 1lop_A 66 EPIK---NEANNGLKNTRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVV-DGMDEVDKIKGVAT 141 (164)
T ss_dssp CCBC---CCCCSSCCCCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTSCCCEEEEEE-ECHHHHHHHHTSCE
T ss_pred Cccc---cccccccccCccEEEEeecCCCCCccceEEEEcCCccccCCccccccCCceEEEEEEe-cCHHHHHHHHhCCc
Confidence 4444 4432 2347999999973 48999999999999997 99999999 99999999999998
Q ss_pred CCccccceeeeeeeCCeeEEEEEe
Q 019630 308 KQEVWSNVNVSVLEKPIPLRFRRI 331 (338)
Q Consensus 308 ~~~~~~~i~v~vl~~pv~i~~~ri 331 (338)
+.... ....+.+||.|+..++
T Consensus 142 ~~~~~---~~~~P~~~v~I~~~~v 162 (164)
T 1lop_A 142 GRSGM---HQDVPKEDVIIESVTV 162 (164)
T ss_dssp EEETT---EEEEESSCCEEEEEEE
T ss_pred CCccc---cCCCcCCCeEEEEEEE
Confidence 75311 1235778888887665
No 14
>2hq6_A Serologically defined colon cancer antigen 10; protein folding, peptidyl-prolyl CIS-trans isomerase, struct genomics; 1.75A {Homo sapiens}
Probab=100.00 E-value=1.5e-33 Score=253.35 Aligned_cols=152 Identities=22% Similarity=0.278 Sum_probs=119.5
Q ss_pred cCCCceEEEEEEeeeeEEEEecCCCChHHHHHHHHHHhCCCCCCcEEEEeeeCCccccCCCCcccCCCCccCCCccccCC
Q 019630 158 FGKGEGIVRLETEYGTLHVKLLPDSAPLSVAYMLELLASRHCVGCQFHRAESRGTHWDTEGNHIENAPGGYGPPFALIQG 237 (338)
Q Consensus 158 ~~~~~~~V~l~T~~G~I~IeL~~d~AP~tv~nFl~L~~~g~YdG~~F~Rv~~~~q~GDp~g~~ik~~~~~~G~p~~liqG 237 (338)
.++....|.|+|+.|+|+||||++.||+||+||++||+.|||+|+.||||++ ++++|.|+|.....|
T Consensus 20 ~~~~~~~V~l~T~~G~I~ieL~~~~aP~tv~NF~~L~~~g~Y~g~~FhRvi~-------------~f~iQgGd~~~~g~g 86 (185)
T 2hq6_A 20 EPPTNGKVLLKTTAGDIDIELWSKEAPKACRNFIQLCLEAYYDNTIFHRVVP-------------GFIVQGGDPTGTGSG 86 (185)
T ss_dssp CCCCBCEEEEEETTEEEEEEEBTTTCHHHHHHHHHHHHTTTTTTEECCEEET-------------TTEEEECCTTSSSSC
T ss_pred CCCCCCEEEEEeCCccEEEEEeCCCCcHHHHHHHHHhhcCccCCCEEEEEEC-------------CCEEEcCCCCCCCCC
Confidence 3456778999999999999999999999999999999999999999999954 445555555444556
Q ss_pred CcccCCCcCCCcCccccCCCCCceEeeeCC-----CCeEEEEcCCCCCCCCCceEEEEEEcccHHH--HHHHhcCCCCCc
Q 019630 238 SLETHSITFKEIPLEVCSTIRRGSVAWVGS-----GPEFFISLANHNEWKKVYTVFGIVLPEDMAI--AERIARLPTKQE 310 (338)
Q Consensus 238 g~~~~g~~~~~i~~E~~~~~~rG~Vsma~s-----GsqFFItL~d~p~ldg~ytVFG~Vi~eGmdv--LdkI~~~~t~~~ 310 (338)
+.++|+..++++....+++.++|+|||||+ ||||||++++.++||++|+|||+|+ ||++ +++|++++++.+
T Consensus 87 g~si~g~~~~dE~~~~l~h~~~G~lsMA~~g~~s~gSQFFIt~~~~~~LDg~~tVFG~V~--G~~v~~~~~i~~~~~~~~ 164 (185)
T 2hq6_A 87 GESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKVT--GDTVYNMLRLSEVDIDDD 164 (185)
T ss_dssp CCCTTSSCBCCCCBTTBCSCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEC--GGGHHHHHHTTCSCBCTT
T ss_pred CCcccCCccccccccCcccCCCeEEEEccCCCCCccceEEEECCCCCccCCCceEEEEEE--eCeeehhhHHhhCCcCCC
Confidence 666777776654333456678999999995 4899999999999999999999998 5655 578999988754
Q ss_pred cccceeeeeeeCCeeEEEEEe
Q 019630 311 VWSNVNVSVLEKPIPLRFRRI 331 (338)
Q Consensus 311 ~~~~i~v~vl~~pv~i~~~ri 331 (338)
..| .+||.|+...+
T Consensus 165 ~~P-------~~~v~I~~~~v 178 (185)
T 2hq6_A 165 ERP-------HNPHKIKSCEV 178 (185)
T ss_dssp SCB-------SSCCEEEEEEE
T ss_pred CCC-------CCCeEEEEEEE
Confidence 433 34555554443
No 15
>1mzw_A Cyclophilin H, U-snRNP-ASSOCIATED cyclophilin; cyclophilin, peptidyl-prolyl-CIS/trans isomerase, spliceosome, U4/U6-60K protein, WD protein; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1qoi_A
Probab=100.00 E-value=1.4e-33 Score=251.89 Aligned_cols=139 Identities=18% Similarity=0.232 Sum_probs=113.1
Q ss_pred CceEEEEE-----EeeeeEEEEecCCCChHHHHHHHHHHhCCC--------CCCcEEEEeeeCCccccCCCCcccCCCCc
Q 019630 161 GEGIVRLE-----TEYGTLHVKLLPDSAPLSVAYMLELLASRH--------CVGCQFHRAESRGTHWDTEGNHIENAPGG 227 (338)
Q Consensus 161 ~~~~V~l~-----T~~G~I~IeL~~d~AP~tv~nFl~L~~~g~--------YdG~~F~Rv~~~~q~GDp~g~~ik~~~~~ 227 (338)
..+.|.|+ |+.|+|+||||++.||+||+||++||+.+| |+|+.||||+++ +++|
T Consensus 9 ~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~g~~~~Y~g~~FhRvi~~-------------f~iQ 75 (177)
T 1mzw_A 9 VNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKGSTFHRVIKD-------------FMIQ 75 (177)
T ss_dssp CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCEETTEECSSTTCBCCEEETT-------------TEEE
T ss_pred CCCEEEEEEEECCeeceeEEEEEcCCCCcHHHHHHHHHHhcccCCcCccceECCCEEEEEECC-------------CEEE
Confidence 34567776 579999999999999999999999999998 999999999655 4444
Q ss_pred cCCCc-cccCCCcccCCCcCCCcCccccCCCCCceEeeeCCC-----CeEEEEcCCCCCCCCCceEEEEEEcccHHHHHH
Q 019630 228 YGPPF-ALIQGSLETHSITFKEIPLEVCSTIRRGSVAWVGSG-----PEFFISLANHNEWKKVYTVFGIVLPEDMAIAER 301 (338)
Q Consensus 228 ~G~p~-~liqGg~~~~g~~~~~i~~E~~~~~~rG~Vsma~sG-----sqFFItL~d~p~ldg~ytVFG~Vi~eGmdvLdk 301 (338)
.|+|. ....|+.++|+..|+++ ...++|.++|+||||++| |||||++++.++||++|+|||+|+ +||+||++
T Consensus 76 gGd~~~~~G~gg~si~g~~f~dE-~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv-~G~dvv~~ 153 (177)
T 1mzw_A 76 GGDFVNGDGTGVASIYRGPFADE-NFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKII-DGLLVMRK 153 (177)
T ss_dssp ECCTTTSSSCCCCCTTSSCBCCC-CCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE-ECHHHHHH
T ss_pred cCCcccCCCCCCCccCCCcccCc-ccccccCCCCEEEEccCCCCCcceEEEEECCCCCccCCCeeEEEEEe-CCHHHHHH
Confidence 44432 23445666777777654 234667789999999954 899999999999999999999999 99999999
Q ss_pred HhcCCCCCccccc
Q 019630 302 IARLPTKQEVWSN 314 (338)
Q Consensus 302 I~~~~t~~~~~~~ 314 (338)
|++++++.+..|.
T Consensus 154 I~~~~t~~~~~P~ 166 (177)
T 1mzw_A 154 IENVPTGPNNKPK 166 (177)
T ss_dssp HHTSCBCGGGCBS
T ss_pred HHhCCcCCCCCCC
Confidence 9999997654444
No 16
>2wfi_A Peptidyl-prolyl CIS-trans isomerase G; phosphoprotein, PRE-mRNA splicing, alternative splicing, nucleus, rotamase, cyclosporin; HET: OCS; 0.75A {Homo sapiens} PDB: 2wfj_A* 2gw2_A
Probab=100.00 E-value=1.3e-33 Score=252.45 Aligned_cols=133 Identities=17% Similarity=0.164 Sum_probs=108.9
Q ss_pred EEeeeeEEEEecCCCChHHHHHHHHHHh-----------CCCCCCcEEEEeeeCCccccCCCCcccCCCCccCCCc-ccc
Q 019630 168 ETEYGTLHVKLLPDSAPLSVAYMLELLA-----------SRHCVGCQFHRAESRGTHWDTEGNHIENAPGGYGPPF-ALI 235 (338)
Q Consensus 168 ~T~~G~I~IeL~~d~AP~tv~nFl~L~~-----------~g~YdG~~F~Rv~~~~q~GDp~g~~ik~~~~~~G~p~-~li 235 (338)
.|+.|+|+|+||++.||+||+||++||+ .+||+|+.||||+++ +++|.|+|. ...
T Consensus 20 ~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~~Y~g~~FhRvi~~-------------f~iQgGd~~~~~g 86 (179)
T 2wfi_A 20 NQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKD-------------FMVQGGDFSEGNG 86 (179)
T ss_dssp TEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETT-------------TEEEECCTTTSSS
T ss_pred CccceEEEEEEcCCCCChHHHHHHHHhcCCcCcccccccCCeECCCEEEEEECC-------------CEEEcccccCCCC
Confidence 5899999999999999999999999996 679999999999655 444444432 234
Q ss_pred CCCcccCCCcCCCcCccccCCCCCceEeeeCC-----CCeEEEEcCCCCCCCCCceEEEEEEcccHHHHHHHhcCCCCCc
Q 019630 236 QGSLETHSITFKEIPLEVCSTIRRGSVAWVGS-----GPEFFISLANHNEWKKVYTVFGIVLPEDMAIAERIARLPTKQE 310 (338)
Q Consensus 236 qGg~~~~g~~~~~i~~E~~~~~~rG~Vsma~s-----GsqFFItL~d~p~ldg~ytVFG~Vi~eGmdvLdkI~~~~t~~~ 310 (338)
.|+.++|+..|+++ .....|.++|+|||||+ ||||||++.+.|+||++|+|||+|+ +|||||++|++++++.+
T Consensus 87 ~gg~si~g~~f~dE-~~~~~h~~~G~lsMAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv-~G~dvv~~I~~~~t~~~ 164 (179)
T 2wfi_A 87 RGGESIYGGFFEDE-SFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVI-SGQEVVREIENQKTDAA 164 (179)
T ss_dssp SCCCCTTSSCBCCC-CCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE-ECHHHHHHHHTCCBCTT
T ss_pred CCCCcccCCccccc-ccCcCcCCCeEEEEEeCCCCCcceEEEEEcCCCcccCCCeeEEEEEe-CCHHHHHHHHcCCCCCC
Confidence 55666777766554 23466778999999995 4899999999999999999999999 99999999999999875
Q ss_pred cccce
Q 019630 311 VWSNV 315 (338)
Q Consensus 311 ~~~~i 315 (338)
..|..
T Consensus 165 ~~P~~ 169 (179)
T 2wfi_A 165 SKPFA 169 (179)
T ss_dssp SCBSS
T ss_pred CCCCC
Confidence 54443
No 17
>3ich_A Peptidyl-prolyl CIS-trans isomerase B; beta sandwich, cyclosporin, endoplasmic reticulum, glycoprot isomerase, rotamase; 1.20A {Homo sapiens} PDB: 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=2.8e-33 Score=252.10 Aligned_cols=131 Identities=19% Similarity=0.198 Sum_probs=109.5
Q ss_pred EeeeeEEEEecCCCChHHHHHHHHHHh--CCC-CCCcEEEEeeeCCccccCCCCcccCCCCccCC-CccccCCCcccCCC
Q 019630 169 TEYGTLHVKLLPDSAPLSVAYMLELLA--SRH-CVGCQFHRAESRGTHWDTEGNHIENAPGGYGP-PFALIQGSLETHSI 244 (338)
Q Consensus 169 T~~G~I~IeL~~d~AP~tv~nFl~L~~--~g~-YdG~~F~Rv~~~~q~GDp~g~~ik~~~~~~G~-p~~liqGg~~~~g~ 244 (338)
|+.|+|+|+||++.||+||+||++||+ .|| |+|+.||||++ ++++|.|+ |.....|+.++|+.
T Consensus 27 t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~-------------~f~iQgGd~~~~~g~gg~si~g~ 93 (188)
T 3ich_A 27 EDVGRVIFGLFGKTVPKTVDNFVALATGEKGFGYKNSKFHRVIK-------------DFMIQGGDFTRGDGTGGKSIYGE 93 (188)
T ss_dssp EEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBCCEEET-------------TTEEEECCTTTSSSSCCCBTTBS
T ss_pred EeceeEEEEEcCCCCcHHHHHHHHHhcccCCccccCCEEEEEEC-------------CCEEEcCCccCCCCCCCccccCC
Confidence 789999999999999999999999995 789 99999999954 44455554 33445566677777
Q ss_pred cCCCcCccccCCCCCceEeeeCC-----CCeEEEEcCCCCCCCCCceEEEEEEcccHHHHHHHhcCCCCCccccc
Q 019630 245 TFKEIPLEVCSTIRRGSVAWVGS-----GPEFFISLANHNEWKKVYTVFGIVLPEDMAIAERIARLPTKQEVWSN 314 (338)
Q Consensus 245 ~~~~i~~E~~~~~~rG~Vsma~s-----GsqFFItL~d~p~ldg~ytVFG~Vi~eGmdvLdkI~~~~t~~~~~~~ 314 (338)
.|+++ +..+.|.++|+|||||+ ||||||++++.++||++|+|||+|+ +||+||++|++++++....+.
T Consensus 94 ~f~dE-~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv-~G~dvv~~I~~~~~~~~~~P~ 166 (188)
T 3ich_A 94 RFPDE-NFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVL-EGMEVVRKVESTKTDSRDKPL 166 (188)
T ss_dssp CBCCC-CCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE-ECHHHHHHHHTSCBCTTSCBS
T ss_pred ccccc-ccCcccCCCeEEEEccCCCCCcccEEEEECCCCcccCCCeeEEEEEe-CCHHHHHHHHhCCcCCCCeEC
Confidence 77655 34466778999999995 4899999999999999999999999 999999999999998754443
No 18
>2cmt_A Peptidyl-prolyl CIS-trans isomerase E; rotamase activity, rotamase, RNA-binding, cyclosporin, cyclophilin, beta-barrel; 1.50A {Schistosoma mansoni} PDB: 2ck1_A
Probab=100.00 E-value=3.6e-33 Score=248.15 Aligned_cols=134 Identities=18% Similarity=0.204 Sum_probs=109.5
Q ss_pred CceEEEEE-----EeeeeEEEEecCCCChHHHHHHHHHHh--CCC-CCCcEEEEeeeCCccccCCCCcccCCCCccCCCc
Q 019630 161 GEGIVRLE-----TEYGTLHVKLLPDSAPLSVAYMLELLA--SRH-CVGCQFHRAESRGTHWDTEGNHIENAPGGYGPPF 232 (338)
Q Consensus 161 ~~~~V~l~-----T~~G~I~IeL~~d~AP~tv~nFl~L~~--~g~-YdG~~F~Rv~~~~q~GDp~g~~ik~~~~~~G~p~ 232 (338)
..+.|.|+ |+.|+|+||||++.||+||+||++||+ .|| |+|+.||||+++ +++|.|+|.
T Consensus 9 ~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~-------------f~iQgGd~~ 75 (172)
T 2cmt_A 9 NLPRVFFDIRIGNGDAGRIVMELRSDIVPRTAENFRALCTGERGFGYHNCCFHRVIPQ-------------FMCQGGDFV 75 (172)
T ss_dssp CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBEEEEETT-------------TEEEECCTT
T ss_pred CCCEEEEEEEECCeecceEEEEEcCCCCCHHHHHHHHHhccCCCceECCCEEEEEECC-------------CEEEcCCcc
Confidence 34567776 899999999999999999999999998 488 999999999655 444444432
Q ss_pred -cccCCCcccCCCcCCCcCccccCCCCCceEeeeCC-----CCeEEEEcCCCCCCCCCceEEEEEEcccHHHHHHHhcCC
Q 019630 233 -ALIQGSLETHSITFKEIPLEVCSTIRRGSVAWVGS-----GPEFFISLANHNEWKKVYTVFGIVLPEDMAIAERIARLP 306 (338)
Q Consensus 233 -~liqGg~~~~g~~~~~i~~E~~~~~~rG~Vsma~s-----GsqFFItL~d~p~ldg~ytVFG~Vi~eGmdvLdkI~~~~ 306 (338)
....|+.++|+..|+++ ...++|.++|+||||++ ||||||++.+.++||++|+|||+|+ +||+||++|++++
T Consensus 76 ~~~G~gg~si~g~~f~dE-~~~l~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv-~G~dvv~~I~~~~ 153 (172)
T 2cmt_A 76 KGDGTGGKSIYGRKFDDE-NFQLRHEGFGVLSMANSGPNTNGSQFFICTTKCDWLDGKHVVFGRVV-DGQNVVKKMESVG 153 (172)
T ss_dssp TSSSSCCCBTTBSCBCCC-CCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE-ECHHHHHHGGGGC
T ss_pred CCCCCCCCccCCCccccc-ccCcccCCceEEEEeeCCCCCcccEEEEECCCCCccCCCeeEEEEEE-cCHHHHHHHHhCC
Confidence 23455666777666654 23466778999999995 4899999999999999999999999 9999999999998
Q ss_pred CCC
Q 019630 307 TKQ 309 (338)
Q Consensus 307 t~~ 309 (338)
++.
T Consensus 154 ~~~ 156 (172)
T 2cmt_A 154 SKS 156 (172)
T ss_dssp CTT
T ss_pred CCC
Confidence 853
No 19
>2haq_A Cyclophilin; rotamase, proline, isomerase, CIS-trans, protozoa, KAla-AZAR.; 1.97A {Leishmania donovani} PDB: 3eov_A* 3bt8_A
Probab=100.00 E-value=1.5e-33 Score=250.69 Aligned_cols=131 Identities=21% Similarity=0.217 Sum_probs=108.7
Q ss_pred EEeeeeEEEEecCCCChHHHHHHHHHH--hCCC-CCCcEEEEeeeCCccccCCCCcccCCCCccCC-CccccCCCcccCC
Q 019630 168 ETEYGTLHVKLLPDSAPLSVAYMLELL--ASRH-CVGCQFHRAESRGTHWDTEGNHIENAPGGYGP-PFALIQGSLETHS 243 (338)
Q Consensus 168 ~T~~G~I~IeL~~d~AP~tv~nFl~L~--~~g~-YdG~~F~Rv~~~~q~GDp~g~~ik~~~~~~G~-p~~liqGg~~~~g 243 (338)
.|+.|+|+||||++.||+||+||++|| +.|| |+|+.|||++++ +++|.|+ |.....|+.++|+
T Consensus 22 ~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~-------------f~iQgGd~~~~~g~gg~si~g 88 (172)
T 2haq_A 22 SEPLGRITIGLFGKDAPLTTENFRQLCTGEHGFGYKDSIFHRVIQN-------------FMIQGGDFTNFDGTGGKSIYG 88 (172)
T ss_dssp TEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBCCEEETT-------------TEEEECCTTTSSSSCCCCSSS
T ss_pred CEecceEEEEEeCCCCcHHHHHHHHHhccCCCcccCCCEEEEEECC-------------CEEecCCccCCCCCCCccccC
Confidence 589999999999999999999999999 7899 999999999655 4444444 3334456666777
Q ss_pred CcCCCcCccccCCCCCceEeeeCC-----CCeEEEEcCCCCCCCCCceEEEEEEcccHHHHHHHhcCCCCCccccc
Q 019630 244 ITFKEIPLEVCSTIRRGSVAWVGS-----GPEFFISLANHNEWKKVYTVFGIVLPEDMAIAERIARLPTKQEVWSN 314 (338)
Q Consensus 244 ~~~~~i~~E~~~~~~rG~Vsma~s-----GsqFFItL~d~p~ldg~ytVFG~Vi~eGmdvLdkI~~~~t~~~~~~~ 314 (338)
..|+++ +..+++. +|+||||++ +|||||++++.++||++|+|||+|+ +||+||++|++++++....|.
T Consensus 89 ~~f~dE-~~~l~h~-~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv-~G~dvv~~I~~~~t~~~~~P~ 161 (172)
T 2haq_A 89 EKFADE-NLNVKHF-VGALSMANAGPNTNGSQFFITTAPTPWLDGRHVVFGKVL-DGMDVVLRIEKTKTNSHDRPV 161 (172)
T ss_dssp SCBCCC-CCCSCCC-TTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE-ECHHHHHHHHTSCBCGGGCBS
T ss_pred CcccCc-CCCcccC-ceEEEEccCCCCCcccEEEEECCCCCccCCCEeEEEEEe-CCHHHHHHHHhCCcCCCCcCC
Confidence 777655 3345566 999999995 4899999999999999999999999 999999999999998754443
No 20
>3pmp_A Cyclophilin A; peptidyl prolyl isomerase, isomerase-immunosuppressant compl; HET: BMT; 1.47A {Moniliophthora perniciosa} SCOP: b.62.1.1 PDB: 3o7t_A
Probab=100.00 E-value=4e-33 Score=245.93 Aligned_cols=126 Identities=18% Similarity=0.204 Sum_probs=107.8
Q ss_pred EeeeeEEEEecCCCChHHHHHHHHHHh--CCC-CCCcEEEEeeeCCccccCCCCcccCCCCccCC-CccccCCCcccCCC
Q 019630 169 TEYGTLHVKLLPDSAPLSVAYMLELLA--SRH-CVGCQFHRAESRGTHWDTEGNHIENAPGGYGP-PFALIQGSLETHSI 244 (338)
Q Consensus 169 T~~G~I~IeL~~d~AP~tv~nFl~L~~--~g~-YdG~~F~Rv~~~~q~GDp~g~~ik~~~~~~G~-p~~liqGg~~~~g~ 244 (338)
|+.|+|+||||++.||+||+||++||+ .|| |+|+.|||++++ +++|.|+ +.....|+.++++.
T Consensus 14 t~~G~i~ieL~~~~aP~t~~nF~~L~~g~~g~~Y~g~~fhRvi~~-------------f~iQgGd~~~~~g~gg~si~g~ 80 (164)
T 3pmp_A 14 KPEGRIVFKLYDEAVPKTAKNFRELATGQHGFGYKDSIFHRVIPQ-------------FMLQGGDFTRHNGTGGKSIYGE 80 (164)
T ss_dssp EEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBEEEEETT-------------TEEEECCTTTSSSSCCCBTTBS
T ss_pred EEeeEEEEEEeCCCCcHHHHHHHHHhcccCCCcccCCEEEEEECC-------------CeEEeCCCCCCCCCCCcccCCc
Confidence 999999999999999999999999999 889 999999999655 4444444 33345566777787
Q ss_pred cCCCcCccccCCCCCceEeeeCC-----CCeEEEEcCCCCCCCCCceEEEEEEcccHHHHHHHhcCCCCC
Q 019630 245 TFKEIPLEVCSTIRRGSVAWVGS-----GPEFFISLANHNEWKKVYTVFGIVLPEDMAIAERIARLPTKQ 309 (338)
Q Consensus 245 ~~~~i~~E~~~~~~rG~Vsma~s-----GsqFFItL~d~p~ldg~ytVFG~Vi~eGmdvLdkI~~~~t~~ 309 (338)
.++++ +..++|.++|+|||||+ +|||||++.+.++||++|+|||+|+ +||+||++|++++++.
T Consensus 81 ~~~dE-~~~l~h~~~G~lsma~~g~~t~~SQFfIt~~~~~~Ld~~~~vFG~Vv-~G~~vv~~I~~~~~~~ 148 (164)
T 3pmp_A 81 KFADE-NFQVKHTKPGLLSMANAGANTNGSQFFITTVPTSWLDGKHVVFGEVI-EGLDIVRKVEGKGSAS 148 (164)
T ss_dssp CBCCC-CCCSCCCSTTEEEECBSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE-ECHHHHHHHHTTCCTT
T ss_pred ccccc-ccccCcCCCcEEEEeeCCCCCcccEEEEECCCChhhCCCccEEEEEe-CCHHHHHHHHhCCCCC
Confidence 77655 45567788999999985 4899999999999999999999999 9999999999999863
No 21
>2r99_A Peptidyl-prolyl CIS-trans isomerase E; CIS-trans isomerization, structural genomics consortium, SGC, alternative splicing, mRNA processing; 1.61A {Homo sapiens} SCOP: b.62.1.1 PDB: 3uch_A 1zmf_A
Probab=100.00 E-value=5.1e-33 Score=247.32 Aligned_cols=133 Identities=19% Similarity=0.220 Sum_probs=108.7
Q ss_pred ceEEEEE-----EeeeeEEEEecCCCChHHHHHHHHHHh--CCC-CCCcEEEEeeeCCccccCCCCcccCCCCccCCCc-
Q 019630 162 EGIVRLE-----TEYGTLHVKLLPDSAPLSVAYMLELLA--SRH-CVGCQFHRAESRGTHWDTEGNHIENAPGGYGPPF- 232 (338)
Q Consensus 162 ~~~V~l~-----T~~G~I~IeL~~d~AP~tv~nFl~L~~--~g~-YdG~~F~Rv~~~~q~GDp~g~~ik~~~~~~G~p~- 232 (338)
...|.|+ |+.|+|+||||++.||+||+||++||+ .|| |+|+.||||+++ +++|.|+|.
T Consensus 11 ~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~-------------f~iQgGd~~~ 77 (173)
T 2r99_A 11 NPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFGFKGSSFHRIIPQ-------------FMCQGGDFTN 77 (173)
T ss_dssp CCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBEEEEETT-------------TEEEECCTTT
T ss_pred CCEEEEEEEECCccceeEEEEECCCCCcHHHHHHHHHhcccCCceecCCEEEEeeCC-------------CEEEeCCcCC
Confidence 3456665 789999999999999999999999995 788 999999999655 444444432
Q ss_pred cccCCCcccCCCcCCCcCccccCCCCCceEeeeCC-----CCeEEEEcCCCCCCCCCceEEEEEEcccHHHHHHHhcCCC
Q 019630 233 ALIQGSLETHSITFKEIPLEVCSTIRRGSVAWVGS-----GPEFFISLANHNEWKKVYTVFGIVLPEDMAIAERIARLPT 307 (338)
Q Consensus 233 ~liqGg~~~~g~~~~~i~~E~~~~~~rG~Vsma~s-----GsqFFItL~d~p~ldg~ytVFG~Vi~eGmdvLdkI~~~~t 307 (338)
....|+.++|+..|+++ +..++|.++|+|||||+ +|||||++.+.++||++|+|||+|+ +||+||++|+++++
T Consensus 78 ~~g~gg~si~g~~f~dE-~~~l~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tVFG~Vv-~G~dvv~~I~~~~~ 155 (173)
T 2r99_A 78 HNGTGGKSIYGKKFDDE-NFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVT-EGLDVLRQIEAQGS 155 (173)
T ss_dssp SSSSCCCBTTBSCBCCC-CCCSCCCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE-ECHHHHHHHHTTCC
T ss_pred CCCCCCCccCCCcccCc-ccCcccCCCcEEEEccCCCCCcccEEEEECCCCCccCCCeeEEEEEE-cCHHHHHHHHhCCC
Confidence 23455666777777654 33466778999999995 4899999999999999999999999 99999999999988
Q ss_pred CC
Q 019630 308 KQ 309 (338)
Q Consensus 308 ~~ 309 (338)
+.
T Consensus 156 ~~ 157 (173)
T 2r99_A 156 KD 157 (173)
T ss_dssp TT
T ss_pred CC
Confidence 64
No 22
>1a58_A Cyclophilin; isomerase, ppiase; 1.95A {Brugia malayi} SCOP: b.62.1.1 PDB: 1a33_A 1c5f_A*
Probab=100.00 E-value=6e-33 Score=247.69 Aligned_cols=138 Identities=22% Similarity=0.201 Sum_probs=111.0
Q ss_pred ceEEEEE-----EeeeeEEEEecCCCChHHHHHHHHHHhC--------C---CCCCcEEEEeeeCCccccCCCCcccCCC
Q 019630 162 EGIVRLE-----TEYGTLHVKLLPDSAPLSVAYMLELLAS--------R---HCVGCQFHRAESRGTHWDTEGNHIENAP 225 (338)
Q Consensus 162 ~~~V~l~-----T~~G~I~IeL~~d~AP~tv~nFl~L~~~--------g---~YdG~~F~Rv~~~~q~GDp~g~~ik~~~ 225 (338)
.+.|.|+ |+.|+|+||||++.||+||+||++||+. | ||+|+.||||+++ ++
T Consensus 6 ~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~~~~g~~~~Y~g~~FhRvi~~-------------f~ 72 (177)
T 1a58_A 6 RRRVFLDVTIDGNLAGRIVMELYNDIAPRTCNNFLMLCTGMAGTGKISGKPLHYKGSTFHRVIKN-------------FM 72 (177)
T ss_dssp CEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBCCCTTCBEEEEETT-------------TE
T ss_pred CcEEEEEEEECCEeceeEEEEEcCCCCchHHHHHHHHhcCCcCcccccCCcceeCCCEEEEEECC-------------CE
Confidence 3455554 6799999999999999999999999984 4 9999999999655 44
Q ss_pred CccCCCc-cccCCCcccCCCcCCCcCccccCCCCCceEeeeCC-----CCeEEEEcCCCCCCCCCceEEEEEEcccHHHH
Q 019630 226 GGYGPPF-ALIQGSLETHSITFKEIPLEVCSTIRRGSVAWVGS-----GPEFFISLANHNEWKKVYTVFGIVLPEDMAIA 299 (338)
Q Consensus 226 ~~~G~p~-~liqGg~~~~g~~~~~i~~E~~~~~~rG~Vsma~s-----GsqFFItL~d~p~ldg~ytVFG~Vi~eGmdvL 299 (338)
+|.|+|. ....|+.++|+..|+++ ....+|.++|+|||||+ ||||||++.+.|+||++|+|||+|+ +||+||
T Consensus 73 iQgGd~~~~~g~gg~si~g~~f~dE-~~~~~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv-~G~dvv 150 (177)
T 1a58_A 73 IQGGDFTKGDGTGGESIYGGMFDDE-EFVMKHDEPFVVSMANKGPNTNGSQFFITTTPAPHLNNIHVVFGKVV-SGQEVV 150 (177)
T ss_dssp EEECCCSSSSSSCCCCTTSSCBCCC-CCCSCCCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE-ECHHHH
T ss_pred EEeCCccCCCCCCCCcccCCcccCc-ccCcccCCCeEEEEeeCCCCCceeEEEEECCCCCccCCCEEEEEEEE-cCHHHH
Confidence 4444432 23455666777776654 22456778999999995 4899999999999999999999999 999999
Q ss_pred HHHhcCCCCCccccc
Q 019630 300 ERIARLPTKQEVWSN 314 (338)
Q Consensus 300 dkI~~~~t~~~~~~~ 314 (338)
++|++++++.+..|.
T Consensus 151 ~~I~~~~~~~~~~P~ 165 (177)
T 1a58_A 151 TKIEYLKTNSKNRPL 165 (177)
T ss_dssp HHHHTSCBCTTSCBS
T ss_pred HHHHhCCCCCCCcCC
Confidence 999999998765444
No 23
>4fru_A Cyclophilin B, peptidyl-prolyl CIS-trans isomerase; cyclophilin-type ppiase, peptidyl-prolyl CIS-trans isomerase chaperone, foldase; HET: ME2 PEG; 1.10A {Equus caballus} PDB: 4frv_A* 3ich_A 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=5.1e-33 Score=249.69 Aligned_cols=142 Identities=19% Similarity=0.183 Sum_probs=114.7
Q ss_pred CceEEEEEEe-----eeeEEEEecCCCChHHHHHHHHHHhC--C-CCCCcEEEEeeeCC--ccccCCCCcccCCCCccCC
Q 019630 161 GEGIVRLETE-----YGTLHVKLLPDSAPLSVAYMLELLAS--R-HCVGCQFHRAESRG--THWDTEGNHIENAPGGYGP 230 (338)
Q Consensus 161 ~~~~V~l~T~-----~G~I~IeL~~d~AP~tv~nFl~L~~~--g-~YdG~~F~Rv~~~~--q~GDp~g~~ik~~~~~~G~ 230 (338)
-+..|.|+++ .|+|+||||++.||+||+||++||+. | ||+|+.|||+++++ |+||+..
T Consensus 11 ~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~------------ 78 (185)
T 4fru_A 11 VTVKVYFDLRIGDEDIGRVVIGLFGKTVPKTVDNFVALATGEKGFGYKDSKFHRVIKDFMIQGGDFTR------------ 78 (185)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTSCCSTTCBCCEEETTTEEEECCTTT------------
T ss_pred cCcEEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHHhcCCCCeEcCCEEEEeeCCCeEEECCCCC------------
Confidence 3456777655 99999999999999999999999975 6 79999999996553 5555442
Q ss_pred CccccCCCcccCCCcCCCcCccccCCCCCceEeeeCC-----CCeEEEEcCCCCCCCCCceEEEEEEcccHHHHHHHhcC
Q 019630 231 PFALIQGSLETHSITFKEIPLEVCSTIRRGSVAWVGS-----GPEFFISLANHNEWKKVYTVFGIVLPEDMAIAERIARL 305 (338)
Q Consensus 231 p~~liqGg~~~~g~~~~~i~~E~~~~~~rG~Vsma~s-----GsqFFItL~d~p~ldg~ytVFG~Vi~eGmdvLdkI~~~ 305 (338)
....|+.++++..|+++ +....|.++|+|||||+ ||||||++.+.++||++|+|||+|+ +||+||++|+++
T Consensus 79 --~~g~gg~si~g~~f~de-~~~~~h~~~G~lsma~~gp~t~~SQFfI~~~~~~~Ld~~~~vFG~Vv-~G~dvv~~I~~~ 154 (185)
T 4fru_A 79 --GDGTGGKSIYGERFPDE-NFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVL-EGMEVVRKVETT 154 (185)
T ss_dssp --SSSSCCCBTTBSCBCCC-CCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE-ECHHHHHHHHTS
T ss_pred --CCCCCCccccCCccCcc-ccccCcCCCeEEEEeeCCCCCcceEEEEEeCCCcccCCCccEEEEEe-CCHHHHHHHHhC
Confidence 23456666777777654 34466778999999995 4899999999999999999999999 999999999999
Q ss_pred CCCCccccceeee
Q 019630 306 PTKQEVWSNVNVS 318 (338)
Q Consensus 306 ~t~~~~~~~i~v~ 318 (338)
+++.+.++..+|+
T Consensus 155 ~t~~~~~P~~~v~ 167 (185)
T 4fru_A 155 KTDGRDKPLKDVT 167 (185)
T ss_dssp CBCTTSCBSSCEE
T ss_pred CCCCCCcCCCCEE
Confidence 9987655544443
No 24
>2he9_A NK-tumor recognition protein; cyclosporin, isomerase, membrane, repeat, rotamase, peptidylprolyl isomerase, structural genomics; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.9e-33 Score=252.78 Aligned_cols=132 Identities=21% Similarity=0.225 Sum_probs=108.6
Q ss_pred EEeeeeEEEEecCCCChHHHHHHHHHHh-----------CCCCCCcEEEEeeeCCccccCCCCcccCCCCccCCCc-ccc
Q 019630 168 ETEYGTLHVKLLPDSAPLSVAYMLELLA-----------SRHCVGCQFHRAESRGTHWDTEGNHIENAPGGYGPPF-ALI 235 (338)
Q Consensus 168 ~T~~G~I~IeL~~d~AP~tv~nFl~L~~-----------~g~YdG~~F~Rv~~~~q~GDp~g~~ik~~~~~~G~p~-~li 235 (338)
.|+.|+|+||||++.||+||+||++||+ .+||+|+.||||+++ +++|.|+|. ...
T Consensus 30 ~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~k~~~Y~g~~FhRVi~~-------------fmiQgGd~~~~~G 96 (192)
T 2he9_A 30 REPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKN-------------FMIQGGDFSEGNG 96 (192)
T ss_dssp TEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETT-------------TEEEECCTTTSSS
T ss_pred CEecceEEEEEcCCCCchHHHHHHHHhcCCCCcccccccCCeECCCEEEEEECC-------------CEEEcCcccCCCC
Confidence 5899999999999999999999999995 679999999999655 444444432 234
Q ss_pred CCCcccCCCcCCCcCccccCCCCCceEeeeCC-----CCeEEEEcCCCCCCCCCceEEEEEEcccHHHHHHHhcCCCCCc
Q 019630 236 QGSLETHSITFKEIPLEVCSTIRRGSVAWVGS-----GPEFFISLANHNEWKKVYTVFGIVLPEDMAIAERIARLPTKQE 310 (338)
Q Consensus 236 qGg~~~~g~~~~~i~~E~~~~~~rG~Vsma~s-----GsqFFItL~d~p~ldg~ytVFG~Vi~eGmdvLdkI~~~~t~~~ 310 (338)
.|+.++|+..|+++ ....+|.++|+|||||+ ||||||++.+.++||++|+|||+|+ +||+||++|++++++.+
T Consensus 97 ~gg~siyg~~f~dE-~~~l~h~~~G~lsMAn~gp~tngSQFFIt~~~~~~LDg~~tVFG~Vv-~Gmdvv~~I~~~~t~~~ 174 (192)
T 2he9_A 97 KGGESIYGGYFKDE-NFILKHDRAFLLSMANRGKHTNGSQFFITTKPAPHLDGVHVVFGLVI-SGFEVIEQIENLKTDAA 174 (192)
T ss_dssp SCCCCTTSSCBCCC-CCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE-ECHHHHHHHHTSCBCTT
T ss_pred CCCCcccCCcccCc-cccCCCCCCeEEEEEeCCCCCcceEEEEEcCCCcccCCCccEEEEEE-eCHHHHHHHHcCCcCCC
Confidence 55666777777654 23456778999999995 4899999999999999999999999 99999999999999875
Q ss_pred cccc
Q 019630 311 VWSN 314 (338)
Q Consensus 311 ~~~~ 314 (338)
..|.
T Consensus 175 ~~P~ 178 (192)
T 2he9_A 175 SRPY 178 (192)
T ss_dssp SCBS
T ss_pred CCCc
Confidence 4444
No 25
>1qng_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, cyclophilin-cyclosporin complex, immunosuppressant, cyclophilin; HET: BMT; 2.1A {Plasmodium falciparum} SCOP: b.62.1.1 PDB: 1qnh_A*
Probab=100.00 E-value=4.7e-33 Score=246.87 Aligned_cols=132 Identities=18% Similarity=0.196 Sum_probs=108.7
Q ss_pred ceEEEEEEe-----eeeEEEEecCCCChHHHHHHHHHHh-CCC--------CCCcEEEEeeeCCccccCCCCcccCCCCc
Q 019630 162 EGIVRLETE-----YGTLHVKLLPDSAPLSVAYMLELLA-SRH--------CVGCQFHRAESRGTHWDTEGNHIENAPGG 227 (338)
Q Consensus 162 ~~~V~l~T~-----~G~I~IeL~~d~AP~tv~nFl~L~~-~g~--------YdG~~F~Rv~~~~q~GDp~g~~ik~~~~~ 227 (338)
...|.|+++ .|+|+||||++.||+||+||++||+ .|| |+|+.||||+++ +++|
T Consensus 3 ~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~g~g~~~~~~~Y~g~~FhRvi~~-------------f~iQ 69 (170)
T 1qng_A 3 RSKVFFDISIDNSNAGRIIFELFSDITPRTCENFRALCTGEKIGSRGKNLHYKNSIFHRIIPQ-------------FMCQ 69 (170)
T ss_dssp SCEEEEEEEESSSEEEEEEEEECTTTCHHHHHHHHHHHHTCEECTTSSEECCTTCBCCEEETT-------------TEEE
T ss_pred CCEEEEEEeECCEeceeEEEEEcCCCCCHHHHHHHHHhccCCcCccCccceECCCEEEEEECC-------------CEEE
Confidence 356777766 9999999999999999999999998 588 999999999655 4444
Q ss_pred cCCCc-cccCCCcccCCCcCCCcCccccCCCCCceEeeeCC-----CCeEEEEcCCCCCCCCCceEEEEEEcccHHHHHH
Q 019630 228 YGPPF-ALIQGSLETHSITFKEIPLEVCSTIRRGSVAWVGS-----GPEFFISLANHNEWKKVYTVFGIVLPEDMAIAER 301 (338)
Q Consensus 228 ~G~p~-~liqGg~~~~g~~~~~i~~E~~~~~~rG~Vsma~s-----GsqFFItL~d~p~ldg~ytVFG~Vi~eGmdvLdk 301 (338)
.|+|. ....|+.++|+..|+++ ....+|.++|+||||++ ||||||++.+.++||++|+|||+|+ +||+||++
T Consensus 70 gGd~~~~~g~gg~si~g~~f~dE-~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~Ldg~~~vFG~Vv-~G~dvv~~ 147 (170)
T 1qng_A 70 GGDITNGNGSGGESIYGRSFTDE-NFNMKHDQPGLLSMANAGPNTNSSQFFITLVPCPWLDGKHVVFGKVI-EGMNVVRE 147 (170)
T ss_dssp ECCTTTSSSSCCCBTTBSCBCCC-CCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE-ECHHHHHH
T ss_pred cCCccCCCCCCCccccCCccccc-ccccccCCCCEEEEeecCCCCcccEEEEECCCCcccCCCeeEEEEEE-CCHHHHHH
Confidence 44442 23455666777776654 23466778999999985 4899999999999999999999999 99999999
Q ss_pred HhcCCCC
Q 019630 302 IARLPTK 308 (338)
Q Consensus 302 I~~~~t~ 308 (338)
|+++++.
T Consensus 148 I~~~~t~ 154 (170)
T 1qng_A 148 MEKEGAK 154 (170)
T ss_dssp HHTTCCT
T ss_pred HHhCCCC
Confidence 9999983
No 26
>2z6w_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin D; HET: BMT MLE CIT; 0.96A {Homo sapiens} SCOP: b.62.1.1 PDB: 3rcg_A* 3r49_A* 3r54_A 3r56_A* 3r57_A* 3r59_A* 3rcf_A* 3r4g_A* 3rci_X* 3rck_X* 3rcl_A* 3rd9_X* 3rda_X* 3rdb_A* 3rdc_A* 2bit_X 2biu_X 3qyu_A 3k0m_A 1ak4_A* ...
Probab=100.00 E-value=9.4e-33 Score=243.87 Aligned_cols=125 Identities=20% Similarity=0.255 Sum_probs=103.7
Q ss_pred EeeeeEEEEecCCCChHHHHHHHHHHh--CCC-CCCcEEEEeeeCCccccCCCCcccCCCCccCCCc-cccCCCcccCCC
Q 019630 169 TEYGTLHVKLLPDSAPLSVAYMLELLA--SRH-CVGCQFHRAESRGTHWDTEGNHIENAPGGYGPPF-ALIQGSLETHSI 244 (338)
Q Consensus 169 T~~G~I~IeL~~d~AP~tv~nFl~L~~--~g~-YdG~~F~Rv~~~~q~GDp~g~~ik~~~~~~G~p~-~liqGg~~~~g~ 244 (338)
|+.|+|+||||++.||+||+||++||+ .|| |+|+.||||+++ +++|.|+|. ....|+.++++.
T Consensus 15 t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~fhRvi~~-------------f~iQgGd~~~~~g~gg~si~g~ 81 (165)
T 2z6w_A 15 KPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPS-------------FMCQAGDFTNHNGTGGKSIYGS 81 (165)
T ss_dssp EEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBEEEEETT-------------TEEEECCTTTSSSSCCCBTTBS
T ss_pred EeeeEEEEEEeCCCCcHHHHHHHHHhccCCCccCcCCEEEEEECC-------------CEEEeCCccCCCCCCCCcccCC
Confidence 578999999999999999999999999 999 999999999655 444444432 234455666776
Q ss_pred cCCCcCccccCCCCCceEeeeCC-----CCeEEEEcCCCCCCCCCceEEEEEEcccHHHHHHHhcCCCC
Q 019630 245 TFKEIPLEVCSTIRRGSVAWVGS-----GPEFFISLANHNEWKKVYTVFGIVLPEDMAIAERIARLPTK 308 (338)
Q Consensus 245 ~~~~i~~E~~~~~~rG~Vsma~s-----GsqFFItL~d~p~ldg~ytVFG~Vi~eGmdvLdkI~~~~t~ 308 (338)
.|+++ +..++|.++|+||||++ +|||||++.+.++||++|+|||+|+ +||+||++|+++++.
T Consensus 82 ~f~dE-~~~l~h~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~~vFG~Vv-~G~dvv~~I~~~~~~ 148 (165)
T 2z6w_A 82 RFPDE-NFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVI-EGMDVVKKIESFGSK 148 (165)
T ss_dssp CBCCC-CCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE-ECHHHHHHHHHTCCT
T ss_pred cccCc-ccccccCCCCEEEEeeCCCCCcccEEEEEcCCCcccCCCeeEEEEEE-cCHHHHHHHHhCCCC
Confidence 66554 33456778999999995 4899999999999999999999999 999999999999863
No 27
>3bkp_A Cyclophilin; malaria, isomerase, structural GENO structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1e-32 Score=255.73 Aligned_cols=161 Identities=26% Similarity=0.295 Sum_probs=123.0
Q ss_pred cCCCceEEEEEEeeeeEEEEecCCCChHHHHHHHHHHhCCCCCCcEEEEeeeCCccccCCCCcccCCCCccCCCccccCC
Q 019630 158 FGKGEGIVRLETEYGTLHVKLLPDSAPLSVAYMLELLASRHCVGCQFHRAESRGTHWDTEGNHIENAPGGYGPPFALIQG 237 (338)
Q Consensus 158 ~~~~~~~V~l~T~~G~I~IeL~~d~AP~tv~nFl~L~~~g~YdG~~F~Rv~~~~q~GDp~g~~ik~~~~~~G~p~~liqG 237 (338)
.++....|.|+|+.|+|+|+||++.||+||+||++||+.|||+|+.||||++ ++++|.|+|.....|
T Consensus 17 ~p~~~~~V~l~T~~G~I~ieL~~d~aP~tv~NF~~L~~~g~Ydgt~FhRVi~-------------~FmiQgGdp~~~G~G 83 (232)
T 3bkp_A 17 QGSTRGKVVLHTSLGDLDVELWARECPLACRNFVQLCLEGYYVNTIFHRVVK-------------DFIVQGGDPTGTGRG 83 (232)
T ss_dssp CCSCBCEEEEEETTEEEEEEEBTTTCHHHHHHHHHHHHHTTTTTCBEEEEET-------------TTEEEECCTTSSSSC
T ss_pred cCCCCCEEEEEECCCcEEEEEcCCCCcHHHHHHHHHhhcCccCCCEEEEEeC-------------CCEEEcCCCCCCCCC
Confidence 3456789999999999999999999999999999999999999999999954 445555555444456
Q ss_pred CcccC--CCcCCCcCccccCCCCCceEeeeCC-------------------CCeEEEEcCCCCCCCCCceEEEEEEcccH
Q 019630 238 SLETH--SITFKEIPLEVCSTIRRGSVAWVGS-------------------GPEFFISLANHNEWKKVYTVFGIVLPEDM 296 (338)
Q Consensus 238 g~~~~--g~~~~~i~~E~~~~~~rG~Vsma~s-------------------GsqFFItL~d~p~ldg~ytVFG~Vi~eGm 296 (338)
+.+++ +..|+++....+.+.++|+||||++ ||||||++++.++||++|+|||+|++.++
T Consensus 84 g~si~~~g~~f~dE~~~~l~h~~~G~lsMA~~g~~~~~~~n~e~g~~~~sngSQFFIt~~~~p~LDg~~tVFG~Vvg~~v 163 (232)
T 3bkp_A 84 GADTTFDGKPFDVETHPRLKFRYRGLVGVANLGRSSKDAENDERGRSLGTNGNQFFITLARADVLNNAYTLFGKVTGHTL 163 (232)
T ss_dssp CCCCTTTTCCBCCCCCTTCCCCSTTEEEECCCC----------------CBCSCEEEESSCCGGGTTTSCEEEEECGGGH
T ss_pred CCccccCCCccCCccccCcCcCCCeEEEEeccCCcccccccccccccCCCcCCEEEEECCCCcccCCCccEEEEEEeCch
Confidence 66666 5555543222345668999999984 36999999999999999999999993244
Q ss_pred HHHHHHhcCCCCCccccce-----eeeeeeCCeeEEEEEe
Q 019630 297 AIAERIARLPTKQEVWSNV-----NVSVLEKPIPLRFRRI 331 (338)
Q Consensus 297 dvLdkI~~~~t~~~~~~~i-----~v~vl~~pv~i~~~ri 331 (338)
++|++|++++++.+.++.. .+.++.+|+.-...|.
T Consensus 164 ~~v~kI~~~~t~~~~~P~~~i~I~~~~vl~dPf~d~~~~~ 203 (232)
T 3bkp_A 164 YNLMKFNDLEVGKEDRPMTPPFIKSVDVLWNPFEDLVPRR 203 (232)
T ss_dssp HHHHHHTTSCBCGGGCBSSCCBEEEEEEEECCCTTCCCSS
T ss_pred HHHHHHHcCCcCCCCCcCCCeEEEEEEEEcCChhhhhhcc
Confidence 5599999999976544322 3456667765544443
No 28
>2igv_A Peptidyl-prolyl CIS-trans isomerase 3; rotamase; 1.67A {Caenorhabditis elegans} SCOP: b.62.1.1 PDB: 1e3b_A 1e8k_A 1dyw_A 2igw_A 2hqj_A
Probab=100.00 E-value=1.1e-32 Score=245.18 Aligned_cols=132 Identities=17% Similarity=0.202 Sum_probs=107.8
Q ss_pred eEEEEEEe-----eeeEEEEecCCCChHHHHHHHHHHhC--C--------CCCCcEEEEeeeCCccccCCCCcccCCCCc
Q 019630 163 GIVRLETE-----YGTLHVKLLPDSAPLSVAYMLELLAS--R--------HCVGCQFHRAESRGTHWDTEGNHIENAPGG 227 (338)
Q Consensus 163 ~~V~l~T~-----~G~I~IeL~~d~AP~tv~nFl~L~~~--g--------~YdG~~F~Rv~~~~q~GDp~g~~ik~~~~~ 227 (338)
+.|.|+++ .|+|+||||++.||+||+||++||+. | ||+|+.||||+++ +++|
T Consensus 4 ~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~g~~~~~~~Y~g~~FhRvi~~-------------f~iQ 70 (173)
T 2igv_A 4 SKVFFDITIGGKASGRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRIIPN-------------FMIQ 70 (173)
T ss_dssp CEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETT-------------TEEE
T ss_pred CEEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHhcCCCCCCccCccceECCCEEEEEECC-------------CEEE
Confidence 45666655 99999999999999999999999986 5 7999999999655 4444
Q ss_pred cCCCc-cccCCCcccCCCcCCCcCccccCCCCCceEeeeCC-----CCeEEEEcCCCCCCCCCceEEEEEEcccHHHHHH
Q 019630 228 YGPPF-ALIQGSLETHSITFKEIPLEVCSTIRRGSVAWVGS-----GPEFFISLANHNEWKKVYTVFGIVLPEDMAIAER 301 (338)
Q Consensus 228 ~G~p~-~liqGg~~~~g~~~~~i~~E~~~~~~rG~Vsma~s-----GsqFFItL~d~p~ldg~ytVFG~Vi~eGmdvLdk 301 (338)
.|+|. ....|+.++|+..|+++ ...++|.++|+|||||+ ||||||++.+.++||++|+|||+|+ +||+||++
T Consensus 71 gGd~~~~~G~gg~siyg~~f~dE-~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv-~G~dvv~~ 148 (173)
T 2igv_A 71 GGDFTRGNGTGGESIYGEKFPDE-NFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTEWLDGKHVVFGRVV-EGLDVVKA 148 (173)
T ss_dssp ECCTTTSSSSCCCBTTBSCBCCC-CCCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEE-ECHHHHHH
T ss_pred cCCCCCCCCCCCCccCCCcccCc-ccccCCCCCeEEEEeeCCCCCcceEEEEEcCCccccCCCeeEEEEEe-cCHHHHHH
Confidence 44432 23456666777777654 23466778999999995 4899999999999999999999999 99999999
Q ss_pred HhcCCCCC
Q 019630 302 IARLPTKQ 309 (338)
Q Consensus 302 I~~~~t~~ 309 (338)
|++++++.
T Consensus 149 I~~~~t~~ 156 (173)
T 2igv_A 149 VESNGSQS 156 (173)
T ss_dssp HHTTCCTT
T ss_pred HHhCCCCC
Confidence 99998853
No 29
>3k2c_A Peptidyl-prolyl CIS-trans isomerase; ssgcid, NIH, niaid, SBRI, UW, decode, cytoplasm, rotamase, structural genomics; HET: PG5; 1.95A {Encephalitozoon cuniculi}
Probab=100.00 E-value=2.6e-32 Score=246.73 Aligned_cols=133 Identities=22% Similarity=0.276 Sum_probs=110.4
Q ss_pred ceEEEEE-----EeeeeEEEEecCCCChHHHHHHHHHHh--CCC-CCCcEEEEeeeCCccccCCCCcccCCCCccCC-Cc
Q 019630 162 EGIVRLE-----TEYGTLHVKLLPDSAPLSVAYMLELLA--SRH-CVGCQFHRAESRGTHWDTEGNHIENAPGGYGP-PF 232 (338)
Q Consensus 162 ~~~V~l~-----T~~G~I~IeL~~d~AP~tv~nFl~L~~--~g~-YdG~~F~Rv~~~~q~GDp~g~~ik~~~~~~G~-p~ 232 (338)
.+.|.|+ |+.|+|+|+||++.||+||+||++||+ .+| |+|+.||||+++ +++|.|+ +.
T Consensus 27 ~p~v~~di~i~~t~~G~I~ieL~~~~aP~tv~NF~~L~~g~~g~~Y~g~~FhRvi~~-------------f~iQgGd~~~ 93 (193)
T 3k2c_A 27 SGNVYFDVYANEESLGRIVMKLEDDIVPKTAKNFRTLCERPKGEGYKGSTFHRIIPG-------------FMVQGGDYTA 93 (193)
T ss_dssp TTCEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHSCTTSSSTTCBEEEEETT-------------TEEEECCTTT
T ss_pred CCEEEEEEeECCEEeeEEEEEEcCCCChHHHHHHHHHhccccCCcccCCEEEEEeCC-------------CEEEeCCCCC
Confidence 3456665 789999999999999999999999999 778 999999999655 4444444 23
Q ss_pred cccCCCcccCCCcCCCcCccccCCCCCceEeeeCC-----CCeEEEEcCCCCCCCCCceEEEEEEcccHHHHHHHhcCCC
Q 019630 233 ALIQGSLETHSITFKEIPLEVCSTIRRGSVAWVGS-----GPEFFISLANHNEWKKVYTVFGIVLPEDMAIAERIARLPT 307 (338)
Q Consensus 233 ~liqGg~~~~g~~~~~i~~E~~~~~~rG~Vsma~s-----GsqFFItL~d~p~ldg~ytVFG~Vi~eGmdvLdkI~~~~t 307 (338)
....|+.++++..|+++ +...++.++|+||||++ ||||||++++.++||++|+|||+|+ +|||||++|+++++
T Consensus 94 ~~g~gg~si~g~~f~dE-~~~l~h~~~G~lsmAn~gp~t~gSQFFIt~~~~~~LDg~~tVFG~Vv-~Gmdvv~~I~~~~t 171 (193)
T 3k2c_A 94 HNGTGGRSIYGEKFPDE-NFELKHTKEGILSMANCGAHTNGSQFFITLGKTQWLDEKHVVFGEVV-EGMDVVHKIAKYGS 171 (193)
T ss_dssp SSSSCCCCTTSSCBCCC-CCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE-ECHHHHHHHHTTCC
T ss_pred CCCcCCcccCCCccccc-ccccccCCCcEEEEEeCCCCCCccEEEEECCCCcccCCCccEEEEEe-CCHHHHHHHHhcCC
Confidence 34456667777777655 44567789999999995 4899999999999999999999999 99999999999999
Q ss_pred CC
Q 019630 308 KQ 309 (338)
Q Consensus 308 ~~ 309 (338)
+.
T Consensus 172 ~~ 173 (193)
T 3k2c_A 172 ES 173 (193)
T ss_dssp TT
T ss_pred CC
Confidence 74
No 30
>2poy_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, isomerase, S genomics, structural genomics consortium; HET: BMT; 1.80A {Cryptosporidium parvum iowa II} PDB: 2plu_A*
Probab=100.00 E-value=2.1e-32 Score=245.98 Aligned_cols=134 Identities=20% Similarity=0.248 Sum_probs=108.4
Q ss_pred CCceEEEEEEe-----eeeEEEEecCCCChHHHHHHHHHHh--CCC--------CCCcEEEEeeeCCccccCCCCcccCC
Q 019630 160 KGEGIVRLETE-----YGTLHVKLLPDSAPLSVAYMLELLA--SRH--------CVGCQFHRAESRGTHWDTEGNHIENA 224 (338)
Q Consensus 160 ~~~~~V~l~T~-----~G~I~IeL~~d~AP~tv~nFl~L~~--~g~--------YdG~~F~Rv~~~~q~GDp~g~~ik~~ 224 (338)
...+.|.|+++ .|+|+||||++.||+||+||++||+ .|| |+|+.||||+++ +
T Consensus 17 ~~~~~v~~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~Y~g~~FhRVi~~-------------f 83 (186)
T 2poy_A 17 QGNPVVYFDISIGQTPAGRITMELFADKVPITAENFRALCTGEKGMGQSGKPLCYTGSFFHRIIPQ-------------F 83 (186)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETT-------------T
T ss_pred CCCCEEEEEEeECCEecccEEEEEeCCCCcHHHHHHHHHhcccCCccccCccceECCCEEEEEeCC-------------C
Confidence 34567777765 9999999999999999999999996 688 999999999655 4
Q ss_pred CCccCCCc-cccCCCcccCCCcCCCcCccccCCCCCceEeeeCC-----CCeEEEEcCCCCCCCCCceEEEEEEcccHHH
Q 019630 225 PGGYGPPF-ALIQGSLETHSITFKEIPLEVCSTIRRGSVAWVGS-----GPEFFISLANHNEWKKVYTVFGIVLPEDMAI 298 (338)
Q Consensus 225 ~~~~G~p~-~liqGg~~~~g~~~~~i~~E~~~~~~rG~Vsma~s-----GsqFFItL~d~p~ldg~ytVFG~Vi~eGmdv 298 (338)
++|.|+|. ....|+.++|+..|+++ ...++|.++|+||||++ ||||||++.+.++||++|+|||+|+ +||+|
T Consensus 84 ~iQgGd~~~~~G~gg~si~g~~f~dE-~~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv-~Gmdv 161 (186)
T 2poy_A 84 MIQGGDFTRGDGTGGESIYGSKFRDE-NFVYTHDAPFLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGKVL-EGMEV 161 (186)
T ss_dssp EEEECCTTTSSSSCCCCTTC-CBCCC-CCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE-ECHHH
T ss_pred EEEeCCCCCCCCCCCCccCCCcccCc-ccccccCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCeeEEEEEe-cCHHH
Confidence 44444432 23455666777777654 23456778999999995 4899999999999999999999999 99999
Q ss_pred HHHHhcCCCC
Q 019630 299 AERIARLPTK 308 (338)
Q Consensus 299 LdkI~~~~t~ 308 (338)
|++|++++++
T Consensus 162 v~~I~~~~t~ 171 (186)
T 2poy_A 162 VKSIEKCGSQ 171 (186)
T ss_dssp HHHHHHTCCT
T ss_pred HHHHHhCCCC
Confidence 9999999984
No 31
>1z81_A Cyclophilin; structural genomics, structural genomics consortium, SGC, isomerase; 2.80A {Plasmodium yoelii yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=2.9e-32 Score=252.07 Aligned_cols=137 Identities=16% Similarity=0.208 Sum_probs=112.9
Q ss_pred CCceEEEEEEe-----eeeEEEEecCCCChHHHHHHHHHHhCC--------CCCCcEEEEeeeCCccccCCCCcccCCCC
Q 019630 160 KGEGIVRLETE-----YGTLHVKLLPDSAPLSVAYMLELLASR--------HCVGCQFHRAESRGTHWDTEGNHIENAPG 226 (338)
Q Consensus 160 ~~~~~V~l~T~-----~G~I~IeL~~d~AP~tv~nFl~L~~~g--------~YdG~~F~Rv~~~~q~GDp~g~~ik~~~~ 226 (338)
+....|.|+++ .|+|+||||++.||+||+||++||+.+ ||+|+.||||+++ +++
T Consensus 57 ~~~~~V~~disi~~t~~G~I~ieL~~d~aP~tv~NF~~L~~~~~g~~g~~~~Y~gt~FHRVi~~-------------Fmi 123 (229)
T 1z81_A 57 PSNPVVFMDINLGNNFLGKFKFELFQNIVPKTSENFRQFCTGEYKVNNLPVGYKNTIFHRVIKE-------------FMI 123 (229)
T ss_dssp TTCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCBSSSSBCSSTTEECCEEETT-------------TEE
T ss_pred CCCcEEEEEEeECCeecccEEEEEcCCCCCHHHHHHHHHhhCCCCCcCCCceECCCEEEEEeCC-------------CEE
Confidence 34568888865 899999999999999999999999987 7999999999655 444
Q ss_pred ccCCCc-cccCCCcccCCCcCCCcCccccCCCCCceEeeeCC-----CCeEEEEcCCCCCCCCCceEEEEEEc-ccHHHH
Q 019630 227 GYGPPF-ALIQGSLETHSITFKEIPLEVCSTIRRGSVAWVGS-----GPEFFISLANHNEWKKVYTVFGIVLP-EDMAIA 299 (338)
Q Consensus 227 ~~G~p~-~liqGg~~~~g~~~~~i~~E~~~~~~rG~Vsma~s-----GsqFFItL~d~p~ldg~ytVFG~Vi~-eGmdvL 299 (338)
|.|+|. ....|+.++|+..|+++ ...++|.++|+|||||+ ||||||++.+.++||++|+|||+|++ +||+||
T Consensus 124 QgGD~~~g~G~Gg~siyg~~f~dE-~~~l~h~~~G~LsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~eGmdVv 202 (229)
T 1z81_A 124 QGGDFINHNGSGSLSIYGEKFDDE-NFDIKHDKEGLLSMANSGPNTNGCQFFITTKKCEWLDGKNVVFGRIIDNDSLLLL 202 (229)
T ss_dssp EECCTTTSSSCCCCBTTBSCCCCC-CCCSCCCSTTEEEECCSSSSCCCSCEEEESSCCGGGBTTBCEEEEECSHHHHHHH
T ss_pred EcCCCcCCCCCCCCccCCCccccc-ccccccCCCcEEEeccCCCCCcccEEEEECCCCcccCCCeeEEEEEEecCcHHHH
Confidence 444442 23455666777777654 23466778999999995 48999999999999999999999996 799999
Q ss_pred HHHhcCCCCCc
Q 019630 300 ERIARLPTKQE 310 (338)
Q Consensus 300 dkI~~~~t~~~ 310 (338)
++|++++++.+
T Consensus 203 ~~I~~~~t~~~ 213 (229)
T 1z81_A 203 KKIENVSVTPY 213 (229)
T ss_dssp HHHHHSCBCTT
T ss_pred HHHHhCCCCCC
Confidence 99999999874
No 32
>3rdd_A Peptidyl-prolyl CIS-trans isomerase A; beta barrel, cytosolic, inhibito isomerase-isomerase inhibitor complex; HET: EA4; 2.14A {Homo sapiens}
Probab=100.00 E-value=3.2e-32 Score=244.40 Aligned_cols=133 Identities=21% Similarity=0.240 Sum_probs=109.1
Q ss_pred CceEEEEEEe-----eeeEEEEecCCCChHHHHHHHHHHhC--CC-CCCcEEEEeeeCC--ccccCCCCcccCCCCccCC
Q 019630 161 GEGIVRLETE-----YGTLHVKLLPDSAPLSVAYMLELLAS--RH-CVGCQFHRAESRG--THWDTEGNHIENAPGGYGP 230 (338)
Q Consensus 161 ~~~~V~l~T~-----~G~I~IeL~~d~AP~tv~nFl~L~~~--g~-YdG~~F~Rv~~~~--q~GDp~g~~ik~~~~~~G~ 230 (338)
.++.|.|+++ .|+|+|+||++.||+||+||++||+. || |+|+.||||++++ |+||+.
T Consensus 21 ~~p~v~~di~i~~~~~G~I~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~------------- 87 (184)
T 3rdd_A 21 VNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFT------------- 87 (184)
T ss_dssp CCCEEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTSCSSTTCBCCEEETTTEEEECCTT-------------
T ss_pred CCCEEEEEEeECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCcCcccCCCEEEEccCCcEEEeCCCC-------------
Confidence 3567888877 99999999999999999999999975 45 9999999996553 555533
Q ss_pred CccccCCCcccCCCcCCCcCccccCCCCCceEeeeCCC-----CeEEEEcCCCCCCCCCceEEEEEEcccHHHHHHHhcC
Q 019630 231 PFALIQGSLETHSITFKEIPLEVCSTIRRGSVAWVGSG-----PEFFISLANHNEWKKVYTVFGIVLPEDMAIAERIARL 305 (338)
Q Consensus 231 p~~liqGg~~~~g~~~~~i~~E~~~~~~rG~Vsma~sG-----sqFFItL~d~p~ldg~ytVFG~Vi~eGmdvLdkI~~~ 305 (338)
.....|+.++++..|+++ +...++.++|+||||++| |||||++++.++||++|+|||+|+ +|||||++|+++
T Consensus 88 -~~~g~gg~si~g~~~~de-~~~l~h~~~G~lsmA~~gp~s~gSQFfIt~~~~~~LDg~~tVFG~Vv-~G~dvv~~I~~~ 164 (184)
T 3rdd_A 88 -RHNGTGGKSIYGEKFEDE-NFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVK-EGMNIVEAMERF 164 (184)
T ss_dssp -TSSSSCCCBTTBSCBCCC-CCCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEE-ECHHHHHHHHTT
T ss_pred -CCCCCCCcccCCCcccCc-ccccccCCCcEEEEEeCCCCCcccEEEEEeCCchhhCCCceEEEEEe-cCHHHHHHHHhc
Confidence 223445566677666544 334667789999999954 899999999999999999999999 999999999999
Q ss_pred CCCC
Q 019630 306 PTKQ 309 (338)
Q Consensus 306 ~t~~ 309 (338)
+++.
T Consensus 165 ~~~~ 168 (184)
T 3rdd_A 165 GSRN 168 (184)
T ss_dssp CCTT
T ss_pred CCCC
Confidence 8753
No 33
>2c3b_A Ppiase, cyclophilin; isomerase, 3D domain swapping, misfolding, Asp F 11, allergen, rotamase; 1.85A {Aspergillus fumigatus} SCOP: b.62.1.1
Probab=100.00 E-value=2.5e-33 Score=249.07 Aligned_cols=129 Identities=20% Similarity=0.216 Sum_probs=92.9
Q ss_pred EEEeeeeEEEEecCCCChHHHHHHHHHHh--CCC-CCCcEEEEeeeCCccccCCCCcccCCCCccCC-CccccCCCcccC
Q 019630 167 LETEYGTLHVKLLPDSAPLSVAYMLELLA--SRH-CVGCQFHRAESRGTHWDTEGNHIENAPGGYGP-PFALIQGSLETH 242 (338)
Q Consensus 167 l~T~~G~I~IeL~~d~AP~tv~nFl~L~~--~g~-YdG~~F~Rv~~~~q~GDp~g~~ik~~~~~~G~-p~~liqGg~~~~ 242 (338)
++|++|+|+|+||++.||+||+||++||+ .|| |+|+.||||++ ++++|.|+ |.....|+.++|
T Consensus 17 ~~T~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~fhRvi~-------------~f~iQgGd~~~~~g~gg~si~ 83 (172)
T 2c3b_A 17 AETKVGRIVFNLFDKDVPKTAKNFRELCKRPAGEGYRESTFHRIIP-------------NFMIQGGDFTRGNGTGGRSIY 83 (172)
T ss_dssp SCCEEEEEEEEECTTTSHHHHHHHHHHHHSCTTTSSTTCBCCEEET-------------TTEEEECC-------------
T ss_pred eecccccEEEEEcCCCCcHHHHHHHHHhccCCCcccCCCEEEEEeC-------------CCEEEeCCcCCCCCCCCcccC
Confidence 35899999999999999999999999999 788 99999999954 45555555 444455666677
Q ss_pred CCcCCCcCccccCCCCCceEeeeCC-----CCeEEEEcCCCCCCCCCceEEEEEEcc--cHHHHHHHhcCCCCCc
Q 019630 243 SITFKEIPLEVCSTIRRGSVAWVGS-----GPEFFISLANHNEWKKVYTVFGIVLPE--DMAIAERIARLPTKQE 310 (338)
Q Consensus 243 g~~~~~i~~E~~~~~~rG~Vsma~s-----GsqFFItL~d~p~ldg~ytVFG~Vi~e--GmdvLdkI~~~~t~~~ 310 (338)
+..|+++ +....|.++|+|||||+ ||||||++.+.++||++|+|||+|+ + ||+||++|++++++..
T Consensus 84 g~~f~dE-~~~~~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv-~~~G~dvv~~I~~~~t~~~ 156 (172)
T 2c3b_A 84 GDKFADE-NFSRKHDKKGILSMANAGPNTNGSQFFITTAVTSWLDGKHVVFGEVA-DEKSYSVVKEIEALGSSSG 156 (172)
T ss_dssp ----------CHHHHHTCEEEEC---------CEEEECSCCTTCCSCCEEEEEEC-SHHHHHHHHHHHTTCCTTS
T ss_pred CCcccCc-ccccccCCCeEEEEeeCCCCCcccEEEEECCCCCccCCCeeEEEEEE-ecCCHHHHHHHHhCCCCCC
Confidence 7766544 33344668999999985 4899999999999999999999999 8 9999999999999764
No 34
>2ose_A Probable peptidyl-prolyl CIS-trans isomerase; cyclophilin; 2.04A {Mimivirus}
Probab=99.97 E-value=8.8e-32 Score=249.76 Aligned_cols=135 Identities=20% Similarity=0.250 Sum_probs=106.5
Q ss_pred ceEEEEE-----EeeeeEEEEecCCCChHHHHHHHHHHhC-----------------C--C-CCCcEEEEeeeCCccccC
Q 019630 162 EGIVRLE-----TEYGTLHVKLLPDSAPLSVAYMLELLAS-----------------R--H-CVGCQFHRAESRGTHWDT 216 (338)
Q Consensus 162 ~~~V~l~-----T~~G~I~IeL~~d~AP~tv~nFl~L~~~-----------------g--~-YdG~~F~Rv~~~~q~GDp 216 (338)
...|.|+ |+.|+|+||||++.||+||+||++||+. | | |+|+.||||+++
T Consensus 14 ~p~v~~di~i~~t~~G~I~ieL~~d~aP~tv~NF~~L~~g~~~~~~p~~~~~~~~~~G~~~~Y~gt~FHRVi~~------ 87 (234)
T 2ose_A 14 NPRVYMDIVLNNEIIGRLQIKLFRDAFPAGVENFVQLTNGKTYRVNSNGTGKYKYNRHINRTYEGCKFHNVLHN------ 87 (234)
T ss_dssp SCEEEEEEEETTEEEEEEEEEECGGGCHHHHHHHHHHHHTCCCC---------------CCCSTTCBCCEEETT------
T ss_pred CCEEEEEEEECCcccceEEEEEcCCCCcHHHHHHHHHhcCCccccccccccccccccCCceEECCcEEEEEECC------
Confidence 3455565 9999999999999999999999999983 5 7 999999999554
Q ss_pred CCCcccCCCCccCC-CccccCCCcccCCCc-----CCCcCccccCCCCCceEeeeC----CC-----CeEEEEcCC----
Q 019630 217 EGNHIENAPGGYGP-PFALIQGSLETHSIT-----FKEIPLEVCSTIRRGSVAWVG----SG-----PEFFISLAN---- 277 (338)
Q Consensus 217 ~g~~ik~~~~~~G~-p~~liqGg~~~~g~~-----~~~i~~E~~~~~~rG~Vsma~----sG-----sqFFItL~d---- 277 (338)
+++|.|+ |.....|+.++|+.. |+ +..++|.++|+||||| +| |||||++.+
T Consensus 88 -------FmiQgGd~~~g~G~Gg~siyg~~~~p~~f~---~~~l~h~~~G~lsMAn~~~~~gpntngSQFFIt~~~~~~~ 157 (234)
T 2ose_A 88 -------NYIVSGDIYNSNGSSAGTVYCDEPIPPVFG---DYFYPHESKGLLSLVPYTDESGNRYYDSTFMITLDDIRPS 157 (234)
T ss_dssp -------TEEEECCCC----CCCCCTTTTCCBCCCCC---SCCCCSCSTTEEEECCEECTTSCEEBCSCEEEESSCCCTT
T ss_pred -------CEEEcCCccCCCCCCCccccCCccCccccc---CcCccCCCCCEEEEecccccCCCCCccceEEEEecCcccc
Confidence 4444444 333445666666655 33 2235667899999999 54 899999999
Q ss_pred --CCCCCCCceEEEEEEcccHHHHHHHhcCCCCCcccc
Q 019630 278 --HNEWKKVYTVFGIVLPEDMAIAERIARLPTKQEVWS 313 (338)
Q Consensus 278 --~p~ldg~ytVFG~Vi~eGmdvLdkI~~~~t~~~~~~ 313 (338)
.++||++|+|||+|+ +|||||++|++++++.+..+
T Consensus 158 ~g~p~LDg~~tVFG~Vv-~GmdVv~~I~~~~t~~~~~P 194 (234)
T 2ose_A 158 NVLDELDRDQVVIGQVY-GGLDVLDKINSMIKPYAGRK 194 (234)
T ss_dssp SSGGGSCTTSEEEEEEE-ECHHHHHHHHHHTCCCTTCC
T ss_pred CCCcccCCCeeEEEEEe-CCHHHHHHHHhCCcCCCCCc
Confidence 899999999999999 99999999999999875443
No 35
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.97 E-value=2.3e-30 Score=251.64 Aligned_cols=133 Identities=20% Similarity=0.277 Sum_probs=111.8
Q ss_pred ceEEEEEEe-----eeeEEEEecCCCChHHHHHHHHHHhC--------C---CCCCcEEEEeeeCCccccCCCCcccCCC
Q 019630 162 EGIVRLETE-----YGTLHVKLLPDSAPLSVAYMLELLAS--------R---HCVGCQFHRAESRGTHWDTEGNHIENAP 225 (338)
Q Consensus 162 ~~~V~l~T~-----~G~I~IeL~~d~AP~tv~nFl~L~~~--------g---~YdG~~F~Rv~~~~q~GDp~g~~ik~~~ 225 (338)
.+.|.|+|+ .|+|+|+||++.||+||+||++||+. | ||+|+.||||+++ ++
T Consensus 15 ~~~v~~~~~~~~~~~G~i~~~l~~~~~P~t~~nf~~l~~~~~~~~~~~g~~~~y~~~~fhrv~~~-------------f~ 81 (370)
T 1ihg_A 15 NPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKK-------------FM 81 (370)
T ss_dssp SCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTSSBSCCTTCBEEEEETT-------------TE
T ss_pred CCeEEEEEEECCEecccEEEEEcCCCCchHHHHHHHHcCCCcCcCccCCCcceeCCcEeEEEECC-------------cE
Confidence 467888877 89999999999999999999999997 6 7999999999655 44
Q ss_pred CccCCCc-cccCCCcccCCCcCCCcCccccCCCCCceEeeeCC-----CCeEEEEcCCCCCCCCCceEEEEEEcccHHHH
Q 019630 226 GGYGPPF-ALIQGSLETHSITFKEIPLEVCSTIRRGSVAWVGS-----GPEFFISLANHNEWKKVYTVFGIVLPEDMAIA 299 (338)
Q Consensus 226 ~~~G~p~-~liqGg~~~~g~~~~~i~~E~~~~~~rG~Vsma~s-----GsqFFItL~d~p~ldg~ytVFG~Vi~eGmdvL 299 (338)
+|.|||. ....|+.+++|..|+++ +....|.++|+||||++ ||||||++.+.|+||++|+|||+|+ +||+||
T Consensus 82 ~q~Gd~~~~~g~g~~~~~~~~~~~e-~~~~~~~~~g~l~ma~~~~~~~~sqffi~~~~~~~ld~~~~vfG~v~-~g~~v~ 159 (370)
T 1ihg_A 82 IQGGDFSNQNGTGGESIYGEKFEDE-NFHYKHDKEGLLSMANAGSNTNGSQFFITTVPTPHLDGKHVVFGQVI-KGMGVA 159 (370)
T ss_dssp EEECCTTTSSSSCCCBTTBSCBCCC-CCCBCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE-ECHHHH
T ss_pred EECCCCCCCCCCCCCCCCCCCcCCC-cCCcCCCCCeEEEEeeCCCCCCCceEEEeCCCCcccCCCceEEEEEe-cCHHHH
Confidence 4444443 34556677788777654 33466779999999995 4899999999999999999999999 999999
Q ss_pred HHHhcCCCCC
Q 019630 300 ERIARLPTKQ 309 (338)
Q Consensus 300 dkI~~~~t~~ 309 (338)
++|++++++.
T Consensus 160 ~~i~~~~~~~ 169 (370)
T 1ihg_A 160 KILENVEVKG 169 (370)
T ss_dssp HHHHTSCEET
T ss_pred HHHHcCCCCC
Confidence 9999998865
No 36
>3rfy_A Peptidyl-prolyl CIS-trans isomerase CYP38, chloro; cyclophilin, peptidyl prolyl isomerase, ppiase, TLP,; 2.39A {Arabidopsis thaliana}
Probab=99.95 E-value=6.3e-29 Score=243.34 Aligned_cols=142 Identities=19% Similarity=0.216 Sum_probs=109.8
Q ss_pred CceEEEEEEe--------eeeEEEEecCCCChHHHHHHHHHHhCCCCCCcEEEEeeeCC--ccccCCCCcccCCCC-ccC
Q 019630 161 GEGIVRLETE--------YGTLHVKLLPDSAPLSVAYMLELLASRHCVGCQFHRAESRG--THWDTEGNHIENAPG-GYG 229 (338)
Q Consensus 161 ~~~~V~l~T~--------~G~I~IeL~~d~AP~tv~nFl~L~~~g~YdG~~F~Rv~~~~--q~GDp~g~~ik~~~~-~~G 229 (338)
+...|.|+|+ .|+|+|+||++.||+||+||++||+.|||+|+.|||| +++ |+|||+|+ ..++.- ..+
T Consensus 169 gra~V~m~t~~~~~~~~~~G~I~IeL~~d~AP~Tv~NFl~L~~~GfYdGt~FHRV-~gFmIQgGDp~g~-G~G~~~~~~g 246 (369)
T 3rfy_A 169 GRASVDMKVKIKDNPNIEDCVFRIVLDGYNAPVTAGNFVDLVERHFYDGMEIQRS-DGFVVQTGDPEGP-AEGFIDPSTE 246 (369)
T ss_dssp SEEEEEEEEECCSCSSCSEEEEEEEEETTTCHHHHHHHHHHHHTTTTTTEECEEE-EEEEECCCCCCCC-CSCCCSCCCC
T ss_pred CCeEEEEEEeccCCCcccceEEEEEEeCCCCcHHHHHHHHHhhcCCcCCCeeeee-CCeeEecCCCCCC-CCCccCcccC
Confidence 4568899997 9999999999999999999999999999999999999 885 99999975 222100 011
Q ss_pred CCccccC------C-CcccCCCcCCCcC----ccccCCCCCceEeeeCC-------CCeEEEEc-------CCCCCCCCC
Q 019630 230 PPFALIQ------G-SLETHSITFKEIP----LEVCSTIRRGSVAWVGS-------GPEFFISL-------ANHNEWKKV 284 (338)
Q Consensus 230 ~p~~liq------G-g~~~~g~~~~~i~----~E~~~~~~rG~Vsma~s-------GsqFFItL-------~d~p~ldg~ 284 (338)
.++ .++ | +.++|+..|++.. ...++|+++|+|||||+ ||||||++ ++.++||++
T Consensus 247 ~~~-~iP~E~~~~G~g~piyg~~fedegf~~~~~~L~h~~~G~LsMAns~~gPnSngSQFFItl~d~~L~~~~~~~LDgk 325 (369)
T 3rfy_A 247 KTR-TVPLEIMVTGEKTPFYGSTLEELGLYKAQVVIPFNAFGTMAMAREEFENDSGSSQVFWLLKESELTPSNSNILDGR 325 (369)
T ss_dssp CCC-SSSSSSCSSSSCCSCCCSSTGGGTEEEEEEEECCCCCCCCCCSSCCCCCCCSSCCCCCCCEEEEECSCCCSSSCSC
T ss_pred cCc-ccCccccccCCCCCcCCCccccccccccccccccCCCceEEEeecCCCCCCccceEEEEecccccCCCCCcccCCC
Confidence 111 122 1 2345665554321 12456789999999996 48999999 467899999
Q ss_pred ceEEEEEEcccHHHHHHHhcCC
Q 019630 285 YTVFGIVLPEDMAIAERIARLP 306 (338)
Q Consensus 285 ytVFG~Vi~eGmdvLdkI~~~~ 306 (338)
|+|||+|+ +||+||++|++.+
T Consensus 326 ytVFG~Vv-eGmdVVdkI~~GD 346 (369)
T 3rfy_A 326 YAVFGYVT-DNEDFLADLKVGD 346 (369)
T ss_dssp EEEEEEEE-ESTTGGGGCCTTC
T ss_pred eeEEEEEe-cCHHHHHHHhCCC
Confidence 99999999 9999999999863
No 37
>2nnz_A Hypothetical protein; beta-barrel, structural genomics, ontario centre for structu proteomics, OCSP, unknown function; NMR {Archaeoglobus fulgidus}
Probab=92.85 E-value=0.12 Score=44.47 Aligned_cols=104 Identities=16% Similarity=0.172 Sum_probs=66.2
Q ss_pred ceEEEEEEeeeeEEEEecCCCChHHHHHHHHHHhC----CCCCCcEEEEeeeCCccccCCCCcccCCCCccCCCccccCC
Q 019630 162 EGIVRLETEYGTLHVKLLPDSAPLSVAYMLELLAS----RHCVGCQFHRAESRGTHWDTEGNHIENAPGGYGPPFALIQG 237 (338)
Q Consensus 162 ~~~V~l~T~~G~I~IeL~~d~AP~tv~nFl~L~~~----g~YdG~~F~Rv~~~~q~GDp~g~~ik~~~~~~G~p~~liqG 237 (338)
.+.+.|+-.-..++++|+.+.||+|++.|+++.=. ..|.+-.++.+ |..+
T Consensus 29 ~~~I~i~~~~~~~~a~L~D~~aP~Ta~~f~~~LPl~~~~~~~g~E~y~~l-----------------------p~~l--- 82 (153)
T 2nnz_A 29 EMRLRIRFESAECEVELYEEWAPETVRAIADALPIKSTANRWGDEIYFTT-----------------------QVAV--- 82 (153)
T ss_dssp CCCEEEEETTEEEEECCCTTSCHHHHHHHHHTCSEEEEEEEETTEEEECC-----------------------SCCC---
T ss_pred CeEEEEEECCEEEEEEEcCCCCHHHHHHHHHhCCcEEEHHhhCCcEEEEC-----------------------CCCC---
Confidence 46677877778999999999999999999997621 12322222211 0001
Q ss_pred CcccCCCcCCCcCccccCCCCCceEeeeCCCCeEEEEcCCCCCCC------CCceEEEEEEcccHHHHHHH
Q 019630 238 SLETHSITFKEIPLEVCSTIRRGSVAWVGSGPEFFISLANHNEWK------KVYTVFGIVLPEDMAIAERI 302 (338)
Q Consensus 238 g~~~~g~~~~~i~~E~~~~~~rG~Vsma~sGsqFFItL~d~p~ld------g~ytVFG~Vi~eGmdvLdkI 302 (338)
... .........|.|++-..|-.+-|..++.|... ..-.+||+|+ +|++.|.++
T Consensus 83 -------~~~---en~~~~~~~GDI~Yy~pg~~LaIFYg~~p~s~~e~~~as~~~~lG~I~-~gle~L~~~ 142 (153)
T 2nnz_A 83 -------EKE---ENSKDVVELGDVAYWIPGKAICLFFGKTPISDDKIRPASAVNVIGRIV-NSMEGLKGV 142 (153)
T ss_dssp -------CCS---SCCBCCCCTTEEEEETTTTEEEEESSCCTTCTTSCCCCSSEEEEEECC-SCCCCGGGC
T ss_pred -------CCC---CCCcccCCCCeEEEeCCCCEEEEEECCccccccccccccccEEEEEEc-cCHHHHhhC
Confidence 000 00112236899999887778999998874322 1247899999 887766443
No 38
>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG; 2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A
Probab=92.11 E-value=0.16 Score=52.36 Aligned_cols=59 Identities=19% Similarity=0.309 Sum_probs=46.1
Q ss_pred eeeecccccccccccccccccCHHHHHHHhhhhccCCCCCCCcceeEEcCCCCCCCC-ccceeEeecCCC
Q 019630 69 GIEHLELWGDAVKWGANFKVNSSKECCMACKDTCEAEDRPCSCDSWVFCGDKQACGS-RFGECWLKKQKD 137 (338)
Q Consensus 69 ~~~~~e~~g~~v~~g~~~~~~sa~~cc~aC~~~~~~~~~~~~cn~WV~c~~~~~c~~-~~~ecWlK~~~~ 137 (338)
-.++++|.|..++ .-...+|++||..|.... .|-.|-|=.+...=-+ +..-||||....
T Consensus 24 ~~~~~d~~G~d~~---~v~~~~~~~C~~~C~~~~-------~C~~ft~~~~~~~~~~~~~~~C~LK~~~~ 83 (625)
T 2f83_A 24 LLKDTCFEGGDIT---TVFTPSAKYCQVVCTYHP-------RCLLFTFTAESPSEDPTRWFTCVLKDSVT 83 (625)
T ss_dssp CEEEEEECSCEEE---EEECSSHHHHHHHHHHSS-------SCCEEEEECCCTTSCSTTTTEEEEECCGG
T ss_pred hcccccccCCcee---EEecCCHHHHHHhccCCC-------CeeEEEEeCCCCCccccccceEEeccccc
Confidence 3489999999887 344678999999999986 9999999988853222 334689999865
No 39
>2yil_A Microneme antigen L2; sugar binding protein, apple-domain tandem repeat, PAN_AP, P galactose-binding lectin, cellular adhesion; 1.95A {Sarcocystis muris} PDB: 2yio_A* 2yip_A*
Probab=91.81 E-value=0.13 Score=43.65 Aligned_cols=54 Identities=22% Similarity=0.348 Sum_probs=42.9
Q ss_pred ceeeeeecccccccccccccccccCHHHHHHHhhhhccCCCCCCCcceeEEcCCCCCCCCccceeEeecCCC
Q 019630 66 CCRGIEHLELWGDAVKWGANFKVNSSKECCMACKDTCEAEDRPCSCDSWVFCGDKQACGSRFGECWLKKQKD 137 (338)
Q Consensus 66 ~c~~~~~~e~~g~~v~~g~~~~~~sa~~cc~aC~~~~~~~~~~~~cn~WV~c~~~~~c~~~~~ecWlK~~~~ 137 (338)
.| -+.+.+|-|..++= ..-.+.+|.+|.++|.+.. +|..|.|=. ..||||....
T Consensus 81 ~C-~~~~vdy~G~d~~~-~~~s~~~a~~CQ~~C~~~~-------~C~~fTf~~---------~tC~lk~~da 134 (138)
T 2yil_A 81 NC-SDACWMDGNNPLAV-WDYSGQPPALCWAACMGTP-------GCDLYTFQG---------MTCKLYSQTS 134 (138)
T ss_dssp CC-CSSEETTCCCCSEE-EECTTCCTHHHHHHHHTST-------TCCEEECGG---------GEEEEECCCC
T ss_pred cH-HhcCCCccCccccc-cccccCCHHHHHHHhCCCC-------CCcEEEEeC---------CeeEEECCcc
Confidence 45 66889999988654 3444468999999999997 999999977 4789998753
No 40
>2yil_A Microneme antigen L2; sugar binding protein, apple-domain tandem repeat, PAN_AP, P galactose-binding lectin, cellular adhesion; 1.95A {Sarcocystis muris} PDB: 2yio_A* 2yip_A*
Probab=91.33 E-value=0.13 Score=43.48 Aligned_cols=50 Identities=18% Similarity=0.412 Sum_probs=36.7
Q ss_pred ccccccccccccccccCHHHHHHHhhhhccCCCCCCCcceeEEcCCCCCCCCccceeEeecCCC
Q 019630 74 ELWGDAVKWGANFKVNSSKECCMACKDTCEAEDRPCSCDSWVFCGDKQACGSRFGECWLKKQKD 137 (338)
Q Consensus 74 e~~g~~v~~g~~~~~~sa~~cc~aC~~~~~~~~~~~~cn~WV~c~~~~~c~~~~~ecWlK~~~~ 137 (338)
..+|..++-=..-.+.|+++|++.|+++. .|.-|-|=.+. ..||||..++
T Consensus 14 ~n~G~~~~~i~~~~v~Sa~~Cq~~C~~~~-------~C~~FTf~~~~-------k~C~LK~~~~ 63 (138)
T 2yil_A 14 KNIGSRTEQLSVVHVASAQDCMKECQALP-------TCSHFTYNKNS-------KKCHLKAGAP 63 (138)
T ss_dssp SCEEECSCEEEEEECSSHHHHHHHHHHST-------TCCEEEEETTT-------CEEEEECSCC
T ss_pred CccCcchhcccccCCCCHHHHHHHccCCC-------CCCEEEEECCC-------CEEEeccCch
Confidence 33444433223455889999999999997 99999997777 4679997643
No 41
>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG; 2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A
Probab=91.04 E-value=0.28 Score=50.59 Aligned_cols=63 Identities=19% Similarity=0.363 Sum_probs=47.8
Q ss_pred cceee--eeecccccccccccccccccCHHHHHHHhhhhccCCCCCCCcceeEEcCCCCCCCCccceeEeecCCC
Q 019630 65 RCCRG--IEHLELWGDAVKWGANFKVNSSKECCMACKDTCEAEDRPCSCDSWVFCGDKQACGSRFGECWLKKQKD 137 (338)
Q Consensus 65 ~~c~~--~~~~e~~g~~v~~g~~~~~~sa~~cc~aC~~~~~~~~~~~~cn~WV~c~~~~~c~~~~~ecWlK~~~~ 137 (338)
..|.. ..++||.|..++= ....++++||..|.+.. .|-.|-|=....---.....||||....
T Consensus 108 ~~C~~~~~~~~d~~G~d~~~---~~~~s~~~C~~~C~~~~-------~C~~fTy~~~~~~~~~~~~~C~LK~s~~ 172 (625)
T 2f83_A 108 SACNKDIYVDLDMKGINYNS---SVAKSAQECQERCTDDV-------HCHFFTYATRQFPSLEHRNICLLKHTQT 172 (625)
T ss_dssp CCCCCCCEEEEEEECEEEEE---EECSCHHHHHHHHHTSS-------SCSEEEEECSSCSCSSSTTEEEEEECSS
T ss_pred hcCchhhccccceecceeee---EeeCCHHHHHHhccCCC-------CCcEEEecCCcccCCCCCceeEeccCcC
Confidence 35753 4799999987663 66889999999999987 9999999765433222456899999764
No 42
>4a5v_A MIC4, micronemal protein 4; adhesion; NMR {Toxoplasma gondii}
Probab=90.61 E-value=0.26 Score=42.44 Aligned_cols=55 Identities=22% Similarity=0.456 Sum_probs=44.1
Q ss_pred ceeeeeecccccc-cccccccccccCHHHHHHHhhhhccCCCCCCCcceeEEcCCCCCCCCccceeEeecCCC
Q 019630 66 CCRGIEHLELWGD-AVKWGANFKVNSSKECCMACKDTCEAEDRPCSCDSWVFCGDKQACGSRFGECWLKKQKD 137 (338)
Q Consensus 66 ~c~~~~~~e~~g~-~v~~g~~~~~~sa~~cc~aC~~~~~~~~~~~~cn~WV~c~~~~~c~~~~~ecWlK~~~~ 137 (338)
.|+- +++||.|. .+. ......++.+|+++|.+.. .|..|.|=... ..||||....
T Consensus 83 ~C~~-~~vD~~G~~dl~--~~~~~~s~~~Cq~~C~~~~-------~C~~fTy~~~~-------~~C~LK~~~~ 138 (161)
T 4a5v_A 83 SCFE-QHVSYEGAPDVM--TAMVTSQSADCQAACAADP-------SCEIFTYNEHD-------QKCTFKGRGF 138 (161)
T ss_dssp TTCE-ESEEECSSCBSS--CCCBCSCHHHHHHHHHHCT-------TCCEEEEETTT-------TEEEEECTTT
T ss_pred chhh-CCCcccCchhcc--ccccCCCHHHHHHHcccCC-------CCCEEEeeCCC-------CeeEeCCCCC
Confidence 4655 89999998 442 2467789999999999997 99999998554 5789998865
No 43
>4a5v_A MIC4, micronemal protein 4; adhesion; NMR {Toxoplasma gondii}
Probab=90.13 E-value=0.28 Score=42.30 Aligned_cols=56 Identities=20% Similarity=0.426 Sum_probs=41.4
Q ss_pred ceeeeeecccccccccccccccccCHHHHHHHhhhhccCCCCCCCcceeEEcCCCCCCCCccceeEeecCCC
Q 019630 66 CCRGIEHLELWGDAVKWGANFKVNSSKECCMACKDTCEAEDRPCSCDSWVFCGDKQACGSRFGECWLKKQKD 137 (338)
Q Consensus 66 ~c~~~~~~e~~g~~v~~g~~~~~~sa~~cc~aC~~~~~~~~~~~~cn~WV~c~~~~~c~~~~~ecWlK~~~~ 137 (338)
.|-=-.|+.+-|..| +......|+.+||+.|..+. .|..|.|=... ..||||..+.
T Consensus 10 ~c~~~~n~~~~g~~i--~~~~~~~s~~~Cq~~C~~~p-------~C~~fTf~~~~-------~~C~LK~s~~ 65 (161)
T 4a5v_A 10 SCVHSDNKGSRAPTI--GEPVPDVSLEQCAAQCKAVD-------GCTHFTYNDDS-------KMCHVKEGKP 65 (161)
T ss_dssp SSCCCSSEEECSCBC--SCCBTTCCHHHHHHHHHHST-------TCSEEEEETTT-------CCEEEECSSC
T ss_pred eEEcCCCccccCCCe--eeeecCCCHHHHHHHCcCCC-------CCcEEEEECCC-------CEEEEeCCCC
Confidence 444444555555543 24568899999999999996 99999998655 5679998763
No 44
>3kop_A Uncharacterized protein; protein with A cyclophilin-like fold, structural genomics, J center for structural genomics, JCSG; 1.90A {Arthrobacter SP}
Probab=87.72 E-value=6.4 Score=34.77 Aligned_cols=46 Identities=17% Similarity=0.151 Sum_probs=31.2
Q ss_pred eEEEEEEeee--eEEEEecCCCChHHHHHHHHHHh------CCCCCCcEEEEee
Q 019630 163 GIVRLETEYG--TLHVKLLPDSAPLSVAYMLELLA------SRHCVGCQFHRAE 208 (338)
Q Consensus 163 ~~V~l~T~~G--~I~IeL~~d~AP~tv~nFl~L~~------~g~YdG~~F~Rv~ 208 (338)
..+.++-..+ +++.+|..+.||+||+.|.++.- ..-|.|..+|-..
T Consensus 22 r~i~itl~~~g~~~~A~Lldd~APkTcaA~~~~LP~~~~viHarwSGeeVy~~l 75 (188)
T 3kop_A 22 RYINITLEKRGVTCKALLLDDVAPRTSKAVWDALPQSSQVFHGKYARNEIYNLV 75 (188)
T ss_dssp CEEEEEETTTTEEEEEEECTTTSHHHHHHHHHHCCEEEECEECSSSSSEEEEEE
T ss_pred eEEEEEEecCCeEEEEEEccccChHHHHHHHHhCCCCcceEEEEEecceEEEEC
Confidence 3445554444 47889999999999999999762 1225665555543
No 45
>1zx8_A Hypothetical protein TM1367; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: 1PE; 1.90A {Thermotoga maritima} SCOP: b.62.1.3 PDB: 2ka0_A
Probab=76.22 E-value=8.2 Score=32.37 Aligned_cols=102 Identities=16% Similarity=0.147 Sum_probs=63.6
Q ss_pred ceEEEEEEeeeeEEEEecCCCChHHHHHHHHHHh----CCCCCCcEEEEeeeCCccccCCCCcccCCCCccCCCccccCC
Q 019630 162 EGIVRLETEYGTLHVKLLPDSAPLSVAYMLELLA----SRHCVGCQFHRAESRGTHWDTEGNHIENAPGGYGPPFALIQG 237 (338)
Q Consensus 162 ~~~V~l~T~~G~I~IeL~~d~AP~tv~nFl~L~~----~g~YdG~~F~Rv~~~~q~GDp~g~~ik~~~~~~G~p~~liqG 237 (338)
-+.|.+-.....+..+|+.+ |.|+..|.++.- ...|. .-+|--. |..+ ..
T Consensus 12 ~~~~~~~~~~~~v~a~L~Dn--p~Ta~~~~~~LPl~~~~~~~g-~E~y~~~----------------------p~~l-~~ 65 (136)
T 1zx8_A 12 HMRVELLFESGKCVIDLNEE--YEVVKLLKEKIPFESVVNTWG-EEIYFST----------------------PVNV-QK 65 (136)
T ss_dssp EEEEEEECSSCEEEEEEETT--SHHHHHHHHHCSEEEECEESS-SEEEEEC----------------------SCCC-CC
T ss_pred eeEEEEeeCCcEEEEEEcCC--HHHHHHHHHHCCcEEEHHHhC-CcEEEEC----------------------CccC-CC
Confidence 35666766777899999654 889999999863 22343 3333221 0001 00
Q ss_pred CcccCCCcCCCcCccccCCCCCceEeeeCCCCeEEEEcCCCCCCCC------CceEEEEEEcccHHHHHHH
Q 019630 238 SLETHSITFKEIPLEVCSTIRRGSVAWVGSGPEFFISLANHNEWKK------VYTVFGIVLPEDMAIAERI 302 (338)
Q Consensus 238 g~~~~g~~~~~i~~E~~~~~~rG~Vsma~sGsqFFItL~d~p~ldg------~ytVFG~Vi~eGmdvLdkI 302 (338)
. .........|.|++-..|.-|-|..++.|...+ .-.+||+|. +|++.+.++
T Consensus 66 ----~--------e~~~~~~~~GDIaYw~pgg~LaIFyg~~p~s~~e~~~a~~v~~lGrI~-~~l~~l~~v 123 (136)
T 1zx8_A 66 ----M--------ENPREVVEIGDVGYWPPGKALCLFFGKTPMSDDKIQPASAVNVIGKIV-EGLEDLKKI 123 (136)
T ss_dssp ----C--------SSEESSBCTTEEEEEGGGTEEEEESSCCTTCSSSBCCSSCEEEEEEEE-ECGGGGGGC
T ss_pred ----C--------CCCCccCCCCcEEEeCCCCEEEEEeCCCccccCccccCcCcEEEEEEc-cCHHHHhhC
Confidence 0 001112368999998888899999988753322 368999999 887665443
No 46
>2ll3_A Micronemal protein 4; cell adhesion; NMR {Toxoplasma gondii} PDB: 2ll4_M*
Probab=41.77 E-value=15 Score=28.13 Aligned_cols=38 Identities=21% Similarity=0.489 Sum_probs=30.9
Q ss_pred ccccCHHHHHHHhhhhccCCCCCCCcceeEEcCCCCCCCCccceeEeecCCC
Q 019630 86 FKVNSSKECCMACKDTCEAEDRPCSCDSWVFCGDKQACGSRFGECWLKKQKD 137 (338)
Q Consensus 86 ~~~~sa~~cc~aC~~~~~~~~~~~~cn~WV~c~~~~~c~~~~~ecWlK~~~~ 137 (338)
....+..+|.++|.+.. .|.-.+|-.... -|+||....
T Consensus 27 ~~~~sl~~Cq~aC~a~~-------~C~aFTyN~~s~-------~CflKs~~~ 64 (82)
T 2ll3_A 27 KRASSLSECRARCQAEK-------ECSHYTYNVKSG-------LCYPKRGKP 64 (82)
T ss_dssp EECSSHHHHHHHHHHCT-------TEEEEEEETTTT-------EEEEEESSC
T ss_pred ccCCCHHHHHHHhhccC-------CCCeEEeccCCC-------ceEcccCCC
Confidence 35567889999999986 899999998885 559997643
No 47
>3j1r_A Archaeal adhesion filament core; helical polymer, flagellar filament, cell adhesion, structur protein; 7.50A {Ignicoccus hospitalis}
Probab=40.43 E-value=25 Score=21.20 Aligned_cols=21 Identities=19% Similarity=0.444 Sum_probs=15.6
Q ss_pred HHHHHHHHhhhHHHHHHhhhh
Q 019630 14 AVLIIFVLGCISFFMFYFCFS 34 (338)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~ 34 (338)
+.+.|+++..+...+.|+-||
T Consensus 6 A~~lLIviav~aaVllylW~s 26 (26)
T 3j1r_A 6 ATLLLILIAVAAAVLLYTWVS 26 (26)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHhC
Confidence 455666777788899998775
No 48
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=26.14 E-value=41 Score=32.81 Aligned_cols=47 Identities=17% Similarity=0.249 Sum_probs=40.2
Q ss_pred CCCCceEeeeCCC-----CeEEEEcCCCCCCCCCceEEEEEEcccHHHHHHHh
Q 019630 256 TIRRGSVAWVGSG-----PEFFISLANHNEWKKVYTVFGIVLPEDMAIAERIA 303 (338)
Q Consensus 256 ~~~rG~Vsma~sG-----sqFFItL~d~p~ldg~ytVFG~Vi~eGmdvLdkI~ 303 (338)
..++|.|.+.|+. -|.-|++.|. .-|++.-|.|+|.++.+.+|+-|.
T Consensus 325 ~r~rGdItIdN~~ygRY~GElQI~l~dl-p~d~r~NVVG~I~~edl~LLd~I~ 376 (385)
T 1x7f_A 325 LQERGQVVIGNNSFGKYKGELQIILKEM-PIDERKNIVGTIAEEELFLLDYVG 376 (385)
T ss_dssp CBCTTEEEEECGGGGGGTTCEEEECSCB-CCCTTEEEEEEECGGGGGGGGGCC
T ss_pred cccCCcEEEeCCCccccccEeeEEcccC-CCCCCeeEEEEECHHHHHHHHhcC
Confidence 3479999999965 5999999995 557889999999988999998876
No 49
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=24.13 E-value=40 Score=32.73 Aligned_cols=47 Identities=15% Similarity=0.133 Sum_probs=40.5
Q ss_pred CCCCceEeeeCCC-----CeEEEEcCCCCCCCCCceEEEEEEcccHHHHHHHh
Q 019630 256 TIRRGSVAWVGSG-----PEFFISLANHNEWKKVYTVFGIVLPEDMAIAERIA 303 (338)
Q Consensus 256 ~~~rG~Vsma~sG-----sqFFItL~d~p~ldg~ytVFG~Vi~eGmdvLdkI~ 303 (338)
...+|.|.+.|+. -|.-|++.|.| -|++.-|.|+|.++.+.+|+-|.
T Consensus 299 ~r~rGdItIdN~~ygrY~GElQI~l~dlp-~d~r~NVVG~I~~edl~LLd~I~ 350 (372)
T 2p0o_A 299 ARPVGTVTIDNEKYGRYMGEIQVTLVDLP-KDEKVNTITRIIDKDQTILPLIK 350 (372)
T ss_dssp CBCTTEEEEECGGGGGGTTCEEEESSCBC-CCTTEEEEEEBCGGGGGGGGGCC
T ss_pred cccCCeEEEeCCCccccccEeeEEcccCC-CCCCeEEEEEECHHHHHHHHhcC
Confidence 3479999999965 59999999964 67889999999998999998886
No 50
>3bo0_B Preprotein translocase SECE subunit; ribosome-SECY complex, protein translocation; 9.60A {Escherichia coli} PDB: 3bo1_B 3kcr_B
Probab=22.81 E-value=68 Score=22.76 Aligned_cols=31 Identities=26% Similarity=0.365 Sum_probs=23.3
Q ss_pred CCCCCCcchh---hHHHHHHHHHhhhHHHHHHhhh
Q 019630 2 GRRQTDSELS---RLAVLIIFVLGCISFFMFYFCF 33 (338)
Q Consensus 2 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 33 (338)
-||++-.|.. +++.+.++++|+++. +++++.
T Consensus 24 trKp~~~e~~~v~~~t~vv~~~v~~i~~-~i~lid 57 (65)
T 3bo0_B 24 TRKPTKDEYLAVAKVTALGISLLGIIGY-IIHVPA 57 (65)
T ss_dssp TTTTCTTHHHHHHHHHHHHHHHHHHHHH-HHTTTT
T ss_pred CCCCCHHHHHHHHHHHHhhhhHHHHHHH-HHHHHH
Confidence 3788889999 999999999988663 344443
No 51
>1q90_R Cytochrome B6-F complex iron-sulfur subunit; membrane protein complex, photosynthesis, electron transfer, oxydoreductase, chlorophyll; HET: HEM CL1 BCR TDS SQD LFA LMG; 3.10A {Chlamydomonas reinhardtii} SCOP: f.23.12.1
Probab=22.26 E-value=81 Score=21.76 Aligned_cols=24 Identities=4% Similarity=0.174 Sum_probs=18.3
Q ss_pred CcchhhHHHHHHHHHhhhHHHHHH
Q 019630 7 DSELSRLAVLIIFVLGCISFFMFY 30 (338)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~ 30 (338)
-++.+|=.+|-++++|++++...-
T Consensus 6 ~pdm~RRqfln~l~~G~~a~~a~~ 29 (49)
T 1q90_R 6 VPDMNKRNIMNLILAGGAGLPITT 29 (49)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHHHHHHHH
Confidence 477889889988888887765543
Done!