BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019634
(338 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 175 bits (443), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 101/254 (39%), Positives = 153/254 (60%), Gaps = 11/254 (4%)
Query: 1 MIAVKQHKDASSQG-DREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLD 59
++AVK+ K+ QG + +F++EV+++S A H N++ L G C +RLLVY Y+ NGS+
Sbjct: 64 LVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVA 123
Query: 60 QHLSK--HTRTPLSWEKRMKIALGAAKGLQYLHEN---NIIHRDMGPNNILVTHDFEPML 114
L + ++ PL W KR +IALG+A+GL YLH++ IIHRD+ NIL+ +FE ++
Sbjct: 124 SCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV 183
Query: 115 GDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKT 174
GDFGLAK + D V GT+G++APEY+ GK S KTDV+ +GV+LL+LITG +
Sbjct: 184 GDFGLAKLM-DYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRA 242
Query: 175 ND----KTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQ 230
D + L+ W + LLKE+ L+D + Y ++ ++Q+A C P
Sbjct: 243 FDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPM 302
Query: 231 KRLPMDTVVDALKS 244
+R M VV L+
Sbjct: 303 ERPKMSEVVRMLEG 316
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 174 bits (440), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 101/258 (39%), Positives = 154/258 (59%), Gaps = 19/258 (7%)
Query: 1 MIAVKQHKDASSQG-DREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLD 59
++AVK+ K+ +QG + +F++EV+++S A H N++ L G C +RLLVY Y+ NGS+
Sbjct: 56 LVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVA 115
Query: 60 QHLSK--HTRTPLSWEKRMKIALGAAKGLQYLHEN---NIIHRDMGPNNILVTHDFEPML 114
L + ++ PL W KR +IALG+A+GL YLH++ IIHRD+ NIL+ +FE ++
Sbjct: 116 SCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV 175
Query: 115 GDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG--- 171
GDFGLAK + D V G +G++APEY+ GK S KTDV+ +GV+LL+LITG
Sbjct: 176 GDFGLAKLM-DYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRA 234
Query: 172 -----LKTNDKTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLS 226
L +D + L+ W + LLKE+ L+D + Y ++ ++Q+A C
Sbjct: 235 FDLARLANDDDVM----LLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQ 290
Query: 227 KDPQKRLPMDTVVDALKS 244
P +R M VV L+
Sbjct: 291 SSPMERPKMSEVVRMLEG 308
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/219 (41%), Positives = 131/219 (59%), Gaps = 4/219 (1%)
Query: 16 REFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTP-LSWEK 74
++F E++V++K +HEN+V LLG SDG+ LVY Y+ NGSL LS TP LSW
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 134
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
R KIA GAA G+ +LHEN+ IHRD+ NIL+ F + DFGLA+ + + +
Sbjct: 135 RCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSR 194
Query: 135 VVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTNDKTLGEKGLV-GWARPLLK 193
+VGT Y+APE + G+++ K+D+YSFGVVLL++ITGL D+ + L+ +
Sbjct: 195 IVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDE 253
Query: 194 ERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQKR 232
E+ D ID ++ D D + M +A +CL + KR
Sbjct: 254 EKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKR 291
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/242 (37%), Positives = 137/242 (56%), Gaps = 4/242 (1%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+A+K+ SSQG EF++E++ LS RH ++V L+G C + N+ +L+Y+Y+ NG+L +H
Sbjct: 66 VALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRH 125
Query: 62 L--SKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGL 119
L S +SWE+R++I +GAA+GL YLH IIHRD+ NIL+ +F P + DFG+
Sbjct: 126 LYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGI 185
Query: 120 AKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTNDKTL 179
+K E V GTLGY+ PEY G+L+ K+DVYSFGVVL +++ ++L
Sbjct: 186 SKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSL 245
Query: 180 GEK--GLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQKRLPMDT 237
+ L WA ++DP + D L A KCL+ + R M
Sbjct: 246 PREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGD 305
Query: 238 VV 239
V+
Sbjct: 306 VL 307
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/242 (37%), Positives = 137/242 (56%), Gaps = 4/242 (1%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+A+K+ SSQG EF++E++ LS RH ++V L+G C + N+ +L+Y+Y+ NG+L +H
Sbjct: 66 VALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRH 125
Query: 62 L--SKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGL 119
L S +SWE+R++I +GAA+GL YLH IIHRD+ NIL+ +F P + DFG+
Sbjct: 126 LYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGI 185
Query: 120 AKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTNDKTL 179
+K E V GTLGY+ PEY G+L+ K+DVYSFGVVL +++ ++L
Sbjct: 186 SKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSL 245
Query: 180 GEK--GLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQKRLPMDT 237
+ L WA ++DP + D L A KCL+ + R M
Sbjct: 246 PREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGD 305
Query: 238 VV 239
V+
Sbjct: 306 VL 307
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/219 (41%), Positives = 130/219 (59%), Gaps = 4/219 (1%)
Query: 16 REFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTP-LSWEK 74
++F E++V++K +HEN+V LLG SDG+ LVY Y+ NGSL LS TP LSW
Sbjct: 69 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 128
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
R KIA GAA G+ +LHEN+ IHRD+ NIL+ F + DFGLA+ + +
Sbjct: 129 RCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXR 188
Query: 135 VVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTNDKTLGEKGLV-GWARPLLK 193
+VGT Y+APE + G+++ K+D+YSFGVVLL++ITGL D+ + L+ +
Sbjct: 189 IVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDE 247
Query: 194 ERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQKR 232
E+ D ID ++ D D + M +A +CL + KR
Sbjct: 248 EKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKR 285
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 149 bits (376), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/219 (41%), Positives = 130/219 (59%), Gaps = 4/219 (1%)
Query: 16 REFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTP-LSWEK 74
++F E++V++K +HEN+V LLG SDG+ LVY Y+ NGSL LS TP LSW
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 134
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
R KIA GAA G+ +LHEN+ IHRD+ NIL+ F + DFGLA+ + +
Sbjct: 135 RCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXR 194
Query: 135 VVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTNDKTLGEKGLV-GWARPLLK 193
+VGT Y+APE + G+++ K+D+YSFGVVLL++ITGL D+ + L+ +
Sbjct: 195 IVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDE 253
Query: 194 ERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQKR 232
E+ D ID ++ D D + M +A +CL + KR
Sbjct: 254 EKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKR 291
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 144 bits (362), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 89/219 (40%), Positives = 126/219 (57%), Gaps = 4/219 (1%)
Query: 16 REFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTP-LSWEK 74
++F E++V +K +HEN+V LLG SDG+ LVY Y NGSL LS TP LSW
Sbjct: 66 QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHX 125
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
R KIA GAA G+ +LHEN+ IHRD+ NIL+ F + DFGLA+ + + +
Sbjct: 126 RCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSR 185
Query: 135 VVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTNDKTLGEKGLV-GWARPLLK 193
+VGT Y APE + G+++ K+D+YSFGVVLL++ITGL D+ + L+ +
Sbjct: 186 IVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDE 244
Query: 194 ERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQKR 232
E+ D ID + D D + +A +CL + KR
Sbjct: 245 EKTIEDYIDKKXNDA-DSTSVEAXYSVASQCLHEKKNKR 282
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 124/253 (49%), Gaps = 20/253 (7%)
Query: 2 IAVK--QHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLD 59
+AVK +D ++ EF EV ++ + RH N+V+ +G+ + +V EY+ GSL
Sbjct: 63 VAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLY 122
Query: 60 QHLSKH-TRTPLSWEKRMKIALGAAKGLQYLHENN--IIHRDMGPNNILVTHDFEPMLGD 116
+ L K R L +R+ +A AKG+ YLH N I+HRD+ N+LV + + D
Sbjct: 123 RLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCD 182
Query: 117 FGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTND 176
FGL++ + S + GT ++APE + + K+DVYSFGV+L +L T L+
Sbjct: 183 FGLSRLKA--SXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELAT-LQQPW 239
Query: 177 KTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQKRLPMD 236
L +V K P ++P++ I + C + +P KR
Sbjct: 240 GNLNPAQVVAAVGFKCKRLEIPRNLNPQV------------AAIIEGCWTNEPWKRPSFA 287
Query: 237 TVVDALKSIMEGT 249
T++D L+ +++
Sbjct: 288 TIMDLLRPLIKSA 300
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 125/253 (49%), Gaps = 20/253 (7%)
Query: 2 IAVK--QHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLD 59
+AVK +D ++ EF EV ++ + RH N+V+ +G+ + +V EY+ GSL
Sbjct: 63 VAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLY 122
Query: 60 QHLSKH-TRTPLSWEKRMKIALGAAKGLQYLHENN--IIHRDMGPNNILVTHDFEPMLGD 116
+ L K R L +R+ +A AKG+ YLH N I+HR++ N+LV + + D
Sbjct: 123 RLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCD 182
Query: 117 FGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTND 176
FGL++ + S + + GT ++APE + + K+DVYSFGV+L +L T L+
Sbjct: 183 FGLSRLKA--STFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELAT-LQQPW 239
Query: 177 KTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQKRLPMD 236
L +V K P ++P++ I + C + +P KR
Sbjct: 240 GNLNPAQVVAAVGFKCKRLEIPRNLNPQV------------AAIIEGCWTNEPWKRPSFA 287
Query: 237 TVVDALKSIMEGT 249
T++D L+ +++
Sbjct: 288 TIMDLLRPLIKSA 300
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 124/266 (46%), Gaps = 33/266 (12%)
Query: 1 MIAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
++AVK KD + ++F+ E ++L+ +HE++V G C DG+ ++V+EY+ +G L++
Sbjct: 47 LVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNK 106
Query: 61 HLSKH--------------TRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILV 106
L H + L + + IA A G+ YL + +HRD+ N LV
Sbjct: 107 FLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLV 166
Query: 107 THDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLL 166
+ +GDFG+++ Y + + ++ PE + K +T++DV+SFGV+L
Sbjct: 167 GANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILW 226
Query: 167 QLITGLKTNDKTLGEKGL---VGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKK 223
++ T K L + + R L + R P + YDV
Sbjct: 227 EIFTYGKQPWFQLSNTEVIECITQGRVLERPRVCPK-------EVYDV---------MLG 270
Query: 224 CLSKDPQKRLPMDTVVDALKSIMEGT 249
C ++PQ+RL + + L ++ + T
Sbjct: 271 CWQREPQQRLNIKEIYKILHALGKAT 296
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 113/221 (51%), Gaps = 18/221 (8%)
Query: 2 IAVKQHK--DASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGS-L 58
+AVK K D + + + F++EV VL K RH N+++ +G + N L + C GS L
Sbjct: 61 VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDN--LAIVTQWCEGSSL 118
Query: 59 DQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFG 118
+HL T + + IA A+G+ YLH NIIHRDM NNI + +GDFG
Sbjct: 119 YKHLHVQ-ETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFG 177
Query: 119 LAKTQREDSDYSTETGVVGTLGYLAPEYV---ECGKLSTKTDVYSFGVVLLQLITG---- 171
LA + S G++ ++APE + + S ++DVYS+G+VL +L+TG
Sbjct: 178 LATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPY 237
Query: 172 --LKTNDKTLGEKGLVGWARPLLKE--RNYPDLIDPRIIDC 208
+ D+ + G G+A P L + +N P + + DC
Sbjct: 238 SHINNRDQIIFMVGR-GYASPDLSKLYKNCPKAMKRLVADC 277
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 96/181 (53%), Gaps = 11/181 (6%)
Query: 1 MIAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
++AVK KDAS ++F E ++L+ +HE++V G C +G+ ++V+EY+ +G L++
Sbjct: 45 LVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNK 104
Query: 61 HLSKHTR-----------TPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHD 109
L H T L+ + + IA A G+ YL + +HRD+ N LV +
Sbjct: 105 FLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGEN 164
Query: 110 FEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLI 169
+GDFG+++ Y + + ++ PE + K +T++DV+S GVVL ++
Sbjct: 165 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIF 224
Query: 170 T 170
T
Sbjct: 225 T 225
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 87/157 (55%), Gaps = 5/157 (3%)
Query: 18 FKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMK 77
FK+EV VL K RH N+++ +G + +L + C GS H + T +K +
Sbjct: 55 FKNEVGVLRKTRHVNILLFMGYST--KPQLAIVTQWCEGSSLYHHLHASETKFEMKKLID 112
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
IA A+G+ YLH +IIHRD+ NNI + D +GDFGLA + S + G
Sbjct: 113 IARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSG 172
Query: 138 TLGYLAPEYV---ECGKLSTKTDVYSFGVVLLQLITG 171
++ ++APE + + S ++DVY+FG+VL +L+TG
Sbjct: 173 SILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTG 209
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 96/183 (52%), Gaps = 13/183 (7%)
Query: 1 MIAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
++AVK K+AS ++F+ E ++L+ +H+++V G C++G L+V+EY+ +G L++
Sbjct: 50 LVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNR 109
Query: 61 HLSKH-------------TRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVT 107
L H PL + + +A A G+ YL + +HRD+ N LV
Sbjct: 110 FLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVG 169
Query: 108 HDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQ 167
+GDFG+++ Y + + ++ PE + K +T++DV+SFGVVL +
Sbjct: 170 QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWE 229
Query: 168 LIT 170
+ T
Sbjct: 230 IFT 232
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 96/183 (52%), Gaps = 13/183 (7%)
Query: 1 MIAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
++AVK K+AS ++F+ E ++L+ +H+++V G C++G L+V+EY+ +G L++
Sbjct: 44 LVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNR 103
Query: 61 HLSKH-------------TRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVT 107
L H PL + + +A A G+ YL + +HRD+ N LV
Sbjct: 104 FLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVG 163
Query: 108 HDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQ 167
+GDFG+++ Y + + ++ PE + K +T++DV+SFGVVL +
Sbjct: 164 QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWE 223
Query: 168 LIT 170
+ T
Sbjct: 224 IFT 226
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 87/157 (55%), Gaps = 5/157 (3%)
Query: 18 FKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMK 77
FK+EV VL K RH N+++ +G + +L + C GS H + T +K +
Sbjct: 67 FKNEVGVLRKTRHVNILLFMGYST--KPQLAIVTQWCEGSSLYHHLHASETKFEMKKLID 124
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
IA A+G+ YLH +IIHRD+ NNI + D +GDFGLA + S + G
Sbjct: 125 IARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSG 184
Query: 138 TLGYLAPEYV---ECGKLSTKTDVYSFGVVLLQLITG 171
++ ++APE + + S ++DVY+FG+VL +L+TG
Sbjct: 185 SILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTG 221
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 96/183 (52%), Gaps = 13/183 (7%)
Query: 1 MIAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
++AVK K+AS ++F+ E ++L+ +H+++V G C++G L+V+EY+ +G L++
Sbjct: 73 LVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNR 132
Query: 61 HLSKH-------------TRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVT 107
L H PL + + +A A G+ YL + +HRD+ N LV
Sbjct: 133 FLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVG 192
Query: 108 HDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQ 167
+GDFG+++ Y + + ++ PE + K +T++DV+SFGVVL +
Sbjct: 193 QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWE 252
Query: 168 LIT 170
+ T
Sbjct: 253 IFT 255
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 87/157 (55%), Gaps = 5/157 (3%)
Query: 18 FKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMK 77
FK+EV VL K RH N+++ +G + +L + C GS H + T +K +
Sbjct: 67 FKNEVGVLRKTRHVNILLFMGYST--APQLAIVTQWCEGSSLYHHLHASETKFEMKKLID 124
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
IA A+G+ YLH +IIHRD+ NNI + D +GDFGLA + S + G
Sbjct: 125 IARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSG 184
Query: 138 TLGYLAPEYV---ECGKLSTKTDVYSFGVVLLQLITG 171
++ ++APE + + S ++DVY+FG+VL +L+TG
Sbjct: 185 SILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTG 221
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 97/179 (54%), Gaps = 10/179 (5%)
Query: 2 IAVKQHKDASSQGDRE-FKSEVQVLSK-ARHENVVMLLGSCSDGNKRLLVYEYVCNGSL- 58
+AVK K + ++E SE++++S +HEN+V LLG+C+ G L++ EY C G L
Sbjct: 71 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 130
Query: 59 -------DQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFE 111
+ L K PL + + A+G+ +L N IHRD+ N+L+T+
Sbjct: 131 NFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHV 190
Query: 112 PMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+GDFGLA+ DS+Y + + ++APE + + ++DV+S+G++L ++ +
Sbjct: 191 AKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 97/179 (54%), Gaps = 10/179 (5%)
Query: 2 IAVKQHKDASSQGDRE-FKSEVQVLSK-ARHENVVMLLGSCSDGNKRLLVYEYVCNGSL- 58
+AVK K + ++E SE++++S +HEN+V LLG+C+ G L++ EY C G L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 59 -------DQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFE 111
+ L K PL + + A+G+ +L N IHRD+ N+L+T+
Sbjct: 139 NFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHV 198
Query: 112 PMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+GDFGLA+ DS+Y + + ++APE + + ++DV+S+G++L ++ +
Sbjct: 199 AKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 96/174 (55%), Gaps = 6/174 (3%)
Query: 1 MIAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKR--LLVYEYVCNGSL 58
++AVK+ + ++ + R+F+ E+++L +H+N+V G C +R L+ EY+ GSL
Sbjct: 41 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 100
Query: 59 DQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFG 118
+L KH + + K ++ KG++YL IHRD+ NILV ++ +GDFG
Sbjct: 101 RDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 159
Query: 119 LAKTQREDSDY--STETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
L K +D ++ E G Y APE + K S +DV+SFGVVL +L T
Sbjct: 160 LTKVLPQDKEFFKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 96/174 (55%), Gaps = 6/174 (3%)
Query: 1 MIAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKR--LLVYEYVCNGSL 58
++AVK+ + ++ + R+F+ E+++L +H+N+V G C +R L+ EY+ GSL
Sbjct: 42 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 101
Query: 59 DQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFG 118
+L KH + + K ++ KG++YL IHR++ NILV ++ +GDFG
Sbjct: 102 RDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFG 160
Query: 119 LAKTQREDSDYS--TETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
L K +D +Y E G Y APE + K S +DV+SFGVVL +L T
Sbjct: 161 LTKVLPQDKEYYKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 85/159 (53%), Gaps = 5/159 (3%)
Query: 16 REFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKR 75
+ FK+EV VL K RH N+++ +G + +L + C GS H T K
Sbjct: 49 QAFKNEVGVLRKTRHVNILLFMGYST--KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL 106
Query: 76 MKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGV 135
+ IA A+G+ YLH +IIHRD+ NNI + D +GDFGLA + S +
Sbjct: 107 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL 166
Query: 136 VGTLGYLAPEYVEC---GKLSTKTDVYSFGVVLLQLITG 171
G++ ++APE + S ++DVY+FG+VL +L+TG
Sbjct: 167 SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 205
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 85/159 (53%), Gaps = 5/159 (3%)
Query: 16 REFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKR 75
+ FK+EV VL K RH N+++ +G + +L + C GS H T K
Sbjct: 51 QAFKNEVGVLRKTRHVNILLFMGYST--KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL 108
Query: 76 MKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGV 135
+ IA A+G+ YLH +IIHRD+ NNI + D +GDFGLA + S +
Sbjct: 109 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL 168
Query: 136 VGTLGYLAPEYVEC---GKLSTKTDVYSFGVVLLQLITG 171
G++ ++APE + S ++DVY+FG+VL +L+TG
Sbjct: 169 SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 207
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 85/159 (53%), Gaps = 5/159 (3%)
Query: 16 REFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKR 75
+ FK+EV VL K RH N+++ +G + +L + C GS H T K
Sbjct: 54 QAFKNEVGVLRKTRHVNILLFMGYST--KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL 111
Query: 76 MKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGV 135
+ IA A+G+ YLH +IIHRD+ NNI + D +GDFGLA + S +
Sbjct: 112 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL 171
Query: 136 VGTLGYLAPEYVEC---GKLSTKTDVYSFGVVLLQLITG 171
G++ ++APE + S ++DVY+FG+VL +L+TG
Sbjct: 172 SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 210
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 85/159 (53%), Gaps = 5/159 (3%)
Query: 16 REFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKR 75
+ FK+EV VL K RH N+++ +G + +L + C GS H T K
Sbjct: 54 QAFKNEVGVLRKTRHVNILLFMGYST--KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL 111
Query: 76 MKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGV 135
+ IA A+G+ YLH +IIHRD+ NNI + D +GDFGLA + S +
Sbjct: 112 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL 171
Query: 136 VGTLGYLAPEYVEC---GKLSTKTDVYSFGVVLLQLITG 171
G++ ++APE + S ++DVY+FG+VL +L+TG
Sbjct: 172 SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 210
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 85/159 (53%), Gaps = 5/159 (3%)
Query: 16 REFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKR 75
+ FK+EV VL K RH N+++ +G + +L + C GS H T K
Sbjct: 77 QAFKNEVGVLRKTRHVNILLFMGYST--KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL 134
Query: 76 MKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGV 135
+ IA A+G+ YLH +IIHRD+ NNI + D +GDFGLA + S +
Sbjct: 135 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL 194
Query: 136 VGTLGYLAPEYVEC---GKLSTKTDVYSFGVVLLQLITG 171
G++ ++APE + S ++DVY+FG+VL +L+TG
Sbjct: 195 SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 233
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 85/159 (53%), Gaps = 5/159 (3%)
Query: 16 REFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKR 75
+ FK+EV VL K RH N+++ +G + +L + C GS H T K
Sbjct: 76 QAFKNEVGVLRKTRHVNILLFMGYST--KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL 133
Query: 76 MKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGV 135
+ IA A+G+ YLH +IIHRD+ NNI + D +GDFGLA + S +
Sbjct: 134 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL 193
Query: 136 VGTLGYLAPEYVEC---GKLSTKTDVYSFGVVLLQLITG 171
G++ ++APE + S ++DVY+FG+VL +L+TG
Sbjct: 194 SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 232
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 95/174 (54%), Gaps = 6/174 (3%)
Query: 1 MIAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKR--LLVYEYVCNGSL 58
++AVK+ + ++ + R+F+ E+++L +H+N+V G C +R L+ EY+ GSL
Sbjct: 45 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 104
Query: 59 DQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFG 118
+L KH + + K ++ KG++YL IHRD+ NILV ++ +GDFG
Sbjct: 105 RDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 163
Query: 119 LAKTQREDSDYS--TETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
L K +D + E G Y APE + K S +DV+SFGVVL +L T
Sbjct: 164 LTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 85/159 (53%), Gaps = 5/159 (3%)
Query: 16 REFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKR 75
+ FK+EV VL K RH N+++ +G + +L + C GS H T K
Sbjct: 49 QAFKNEVGVLRKTRHVNILLFMGYST--APQLAIVTQWCEGSSLYHHLHIIETKFEMIKL 106
Query: 76 MKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGV 135
+ IA A+G+ YLH +IIHRD+ NNI + D +GDFGLA + S +
Sbjct: 107 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL 166
Query: 136 VGTLGYLAPEYVEC---GKLSTKTDVYSFGVVLLQLITG 171
G++ ++APE + S ++DVY+FG+VL +L+TG
Sbjct: 167 SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 205
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 85/159 (53%), Gaps = 5/159 (3%)
Query: 16 REFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKR 75
+ FK+EV VL K RH N+++ +G + +L + C GS H T K
Sbjct: 49 QAFKNEVGVLRKTRHVNILLFMGYST--KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL 106
Query: 76 MKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGV 135
+ IA A+G+ YLH +IIHRD+ NNI + D +GDFGLA + S +
Sbjct: 107 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQL 166
Query: 136 VGTLGYLAPEYVEC---GKLSTKTDVYSFGVVLLQLITG 171
G++ ++APE + S ++DVY+FG+VL +L+TG
Sbjct: 167 SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 205
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 95/174 (54%), Gaps = 6/174 (3%)
Query: 1 MIAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKR--LLVYEYVCNGSL 58
++AVK+ + ++ + R+F+ E+++L +H+N+V G C +R L+ EY+ GSL
Sbjct: 40 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 99
Query: 59 DQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFG 118
+L KH + + K ++ KG++YL IHRD+ NILV ++ +GDFG
Sbjct: 100 RDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 158
Query: 119 LAKTQREDSDYS--TETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
L K +D + E G Y APE + K S +DV+SFGVVL +L T
Sbjct: 159 LTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 99/183 (54%), Gaps = 14/183 (7%)
Query: 2 IAVKQHKDASSQGDRE-FKSEVQVLSK-ARHENVVMLLGSCSDGNKRLLVYEYVCNGSLD 59
+AVK K + ++E SE++++S +HEN+V LLG+C+ G L++ EY C G L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 60 QHLSKHTR------------TPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVT 107
L + +R + LS + + A+G+ +L N IHRD+ N+L+T
Sbjct: 139 NFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT 198
Query: 108 HDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQ 167
+ +GDFGLA+ DS+Y + + ++APE + + ++DV+S+G++L +
Sbjct: 199 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWE 258
Query: 168 LIT 170
+ +
Sbjct: 259 IFS 261
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 99/171 (57%), Gaps = 10/171 (5%)
Query: 2 IAVKQHK-DASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRL-LVYEYVCNGSLD 59
+AVK K DA++Q F +E V+++ RH N+V LLG + L +V EY+ GSL
Sbjct: 32 VAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 88
Query: 60 QHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGL 119
+L R+ L + +K +L + ++YL NN +HRD+ N+LV+ D + DFGL
Sbjct: 89 DYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGL 148
Query: 120 AKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
K ++ + +TG + + + APE + K STK+DV+SFG++L ++ +
Sbjct: 149 TK----EASSTQDTGKL-PVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 194
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 85/159 (53%), Gaps = 5/159 (3%)
Query: 16 REFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKR 75
+ FK+EV VL K RH N+++ +G + +L + C GS H T K
Sbjct: 69 QAFKNEVGVLRKTRHVNILLFMGYST--KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL 126
Query: 76 MKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGV 135
+ IA A+G+ YLH +IIHRD+ NNI + D +GDFGLA + S +
Sbjct: 127 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQL 186
Query: 136 VGTLGYLAPEYVEC---GKLSTKTDVYSFGVVLLQLITG 171
G++ ++APE + S ++DVY+FG+VL +L+TG
Sbjct: 187 SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 225
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 99/171 (57%), Gaps = 10/171 (5%)
Query: 2 IAVKQHK-DASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRL-LVYEYVCNGSLD 59
+AVK K DA++Q F +E V+++ RH N+V LLG + L +V EY+ GSL
Sbjct: 47 VAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 103
Query: 60 QHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGL 119
+L R+ L + +K +L + ++YL NN +HRD+ N+LV+ D + DFGL
Sbjct: 104 DYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGL 163
Query: 120 AKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
K ++ + +TG + + + APE + K STK+DV+SFG++L ++ +
Sbjct: 164 TK----EASSTQDTGKL-PVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 209
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 95/174 (54%), Gaps = 6/174 (3%)
Query: 1 MIAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKR--LLVYEYVCNGSL 58
++AVK+ + ++ + R+F+ E+++L +H+N+V G C +R L+ EY+ GSL
Sbjct: 39 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 98
Query: 59 DQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFG 118
+L KH + + K ++ KG++YL IHRD+ NILV ++ +GDFG
Sbjct: 99 RDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 157
Query: 119 LAKTQREDSDYS--TETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
L K +D + E G Y APE + K S +DV+SFGVVL +L T
Sbjct: 158 LTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 85/159 (53%), Gaps = 5/159 (3%)
Query: 16 REFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKR 75
+ FK+EV VL K RH N+++ +G + +L + C GS H T K
Sbjct: 77 QAFKNEVGVLRKTRHVNILLFMGYST--KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL 134
Query: 76 MKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGV 135
+ IA A+G+ YLH +IIHRD+ NNI + D +GDFGLA + S +
Sbjct: 135 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQL 194
Query: 136 VGTLGYLAPEYVEC---GKLSTKTDVYSFGVVLLQLITG 171
G++ ++APE + S ++DVY+FG+VL +L+TG
Sbjct: 195 SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 233
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 95/174 (54%), Gaps = 6/174 (3%)
Query: 1 MIAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKR--LLVYEYVCNGSL 58
++AVK+ + ++ + R+F+ E+++L +H+N+V G C +R L+ EY+ GSL
Sbjct: 72 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 131
Query: 59 DQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFG 118
+L KH + + K ++ KG++YL IHRD+ NILV ++ +GDFG
Sbjct: 132 RDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 190
Query: 119 LAKTQREDSDYS--TETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
L K +D + E G Y APE + K S +DV+SFGVVL +L T
Sbjct: 191 LTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 95/174 (54%), Gaps = 6/174 (3%)
Query: 1 MIAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKR--LLVYEYVCNGSL 58
++AVK+ + ++ + R+F+ E+++L +H+N+V G C +R L+ EY+ GSL
Sbjct: 41 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 100
Query: 59 DQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFG 118
+L KH + + K ++ KG++YL IHRD+ NILV ++ +GDFG
Sbjct: 101 RDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 159
Query: 119 LAKTQREDSDYS--TETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
L K +D + E G Y APE + K S +DV+SFGVVL +L T
Sbjct: 160 LTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 99/171 (57%), Gaps = 10/171 (5%)
Query: 2 IAVKQHK-DASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRL-LVYEYVCNGSLD 59
+AVK K DA++Q F +E V+++ RH N+V LLG + L +V EY+ GSL
Sbjct: 219 VAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 275
Query: 60 QHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGL 119
+L R+ L + +K +L + ++YL NN +HRD+ N+LV+ D + DFGL
Sbjct: 276 DYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGL 335
Query: 120 AKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
K ++ + +TG + + + APE + K STK+DV+SFG++L ++ +
Sbjct: 336 TK----EASSTQDTGKL-PVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 381
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 95/174 (54%), Gaps = 6/174 (3%)
Query: 1 MIAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKR--LLVYEYVCNGSL 58
++AVK+ + ++ + R+F+ E+++L +H+N+V G C +R L+ EY+ GSL
Sbjct: 46 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 105
Query: 59 DQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFG 118
+L KH + + K ++ KG++YL IHRD+ NILV ++ +GDFG
Sbjct: 106 RDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 164
Query: 119 LAKTQREDSDYS--TETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
L K +D + E G Y APE + K S +DV+SFGVVL +L T
Sbjct: 165 LTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 95/174 (54%), Gaps = 6/174 (3%)
Query: 1 MIAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKR--LLVYEYVCNGSL 58
++AVK+ + ++ + R+F+ E+++L +H+N+V G C +R L+ EY+ GSL
Sbjct: 47 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 106
Query: 59 DQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFG 118
+L KH + + K ++ KG++YL IHRD+ NILV ++ +GDFG
Sbjct: 107 RDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 165
Query: 119 LAKTQREDSDYS--TETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
L K +D + E G Y APE + K S +DV+SFGVVL +L T
Sbjct: 166 LTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 96/174 (55%), Gaps = 6/174 (3%)
Query: 1 MIAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKR--LLVYEYVCNGSL 58
++AVK+ + ++ + R+F+ E+++L +H+N+V G C +R L+ E++ GSL
Sbjct: 44 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSL 103
Query: 59 DQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFG 118
++L KH + + K ++ KG++YL IHRD+ NILV ++ +GDFG
Sbjct: 104 REYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 162
Query: 119 LAKTQREDSDYS--TETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
L K +D + E G Y APE + K S +DV+SFGVVL +L T
Sbjct: 163 LTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 95/174 (54%), Gaps = 6/174 (3%)
Query: 1 MIAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKR--LLVYEYVCNGSL 58
++AVK+ + ++ + R+F+ E+++L +H+N+V G C +R L+ EY+ GSL
Sbjct: 41 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 100
Query: 59 DQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFG 118
+L KH + + K ++ KG++YL IHRD+ NILV ++ +GDFG
Sbjct: 101 RDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 159
Query: 119 LAKTQREDSDYS--TETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
L K +D + E G Y APE + K S +DV+SFGVVL +L T
Sbjct: 160 LTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 95/174 (54%), Gaps = 6/174 (3%)
Query: 1 MIAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKR--LLVYEYVCNGSL 58
++AVK+ + ++ + R+F+ E+++L +H+N+V G C +R L+ EY+ GSL
Sbjct: 59 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 118
Query: 59 DQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFG 118
+L KH + + K ++ KG++YL IHRD+ NILV ++ +GDFG
Sbjct: 119 RDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 177
Query: 119 LAKTQREDSDYS--TETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
L K +D + E G Y APE + K S +DV+SFGVVL +L T
Sbjct: 178 LTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 95/174 (54%), Gaps = 6/174 (3%)
Query: 1 MIAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKR--LLVYEYVCNGSL 58
++AVK+ + ++ + R+F+ E+++L +H+N+V G C +R L+ EY+ GSL
Sbjct: 44 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 103
Query: 59 DQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFG 118
+L KH + + K ++ KG++YL IHRD+ NILV ++ +GDFG
Sbjct: 104 RDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 162
Query: 119 LAKTQREDSDYS--TETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
L K +D + E G Y APE + K S +DV+SFGVVL +L T
Sbjct: 163 LTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 95/174 (54%), Gaps = 6/174 (3%)
Query: 1 MIAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKR--LLVYEYVCNGSL 58
++AVK+ + ++ + R+F+ E+++L +H+N+V G C +R L+ EY+ GSL
Sbjct: 48 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 107
Query: 59 DQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFG 118
+L KH + + K ++ KG++YL IHRD+ NILV ++ +GDFG
Sbjct: 108 RDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 166
Query: 119 LAKTQREDSDYS--TETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
L K +D + E G Y APE + K S +DV+SFGVVL +L T
Sbjct: 167 LTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 95/174 (54%), Gaps = 6/174 (3%)
Query: 1 MIAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKR--LLVYEYVCNGSL 58
++AVK+ + ++ + R+F+ E+++L +H+N+V G C +R L+ EY+ GSL
Sbjct: 59 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 118
Query: 59 DQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFG 118
+L KH + + K ++ KG++YL IHRD+ NILV ++ +GDFG
Sbjct: 119 RDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 177
Query: 119 LAKTQREDSDYS--TETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
L K +D + E G Y APE + K S +DV+SFGVVL +L T
Sbjct: 178 LTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 125/265 (47%), Gaps = 42/265 (15%)
Query: 2 IAVKQHKDASSQGDR-EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K +A+S +R EF +E V+ + +VV LLG S G L++ E + G L
Sbjct: 58 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 117
Query: 61 HL--------SKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEP 112
+L + P S K +++A A G+ YL+ N +HRD+ N +V DF
Sbjct: 118 YLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTV 177
Query: 113 MLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT-- 170
+GDFG+ + E Y + + +++PE ++ G +T +DV+SFGVVL ++ T
Sbjct: 178 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLA 237
Query: 171 -----GLKTNDKTLG---EKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAK 222
GL +N++ L E GL L K N PD++ ++ +
Sbjct: 238 EQPYQGL-SNEQVLRFVMEGGL------LDKPDNCPDML----------------FELMR 274
Query: 223 KCLSKDPQKRLPMDTVVDALKSIME 247
C +P+ R ++ ++K ME
Sbjct: 275 MCWQYNPKMRPSFLEIISSIKEEME 299
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 122/258 (47%), Gaps = 28/258 (10%)
Query: 2 IAVKQHKDASSQGDR-EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K +A+S +R EF +E V+ + +VV LLG S G L++ E + G L
Sbjct: 58 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 117
Query: 61 HL--------SKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEP 112
+L + P S K +++A A G+ YL+ N +HRD+ N +V DF
Sbjct: 118 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTV 177
Query: 113 MLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGL 172
+GDFG+ + E Y + + +++PE ++ G +T +DV+SFGVVL ++ T
Sbjct: 178 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLA 237
Query: 173 KTNDKTLGEKGLVGWARP---LLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDP 229
+ + L + ++ + L K N PD++ ++ + C +P
Sbjct: 238 EQPYQGLSNEQVLRFVMEGGLLDKPDNCPDML----------------FELMRMCWQYNP 281
Query: 230 QKRLPMDTVVDALKSIME 247
+ R ++ ++K ME
Sbjct: 282 KMRPSFLEIISSIKEEME 299
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 125/265 (47%), Gaps = 42/265 (15%)
Query: 2 IAVKQHKDASSQGDR-EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K +A+S +R EF +E V+ + +VV LLG S G L++ E + G L
Sbjct: 80 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 139
Query: 61 HL--------SKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEP 112
+L + P S K +++A A G+ YL+ N +HRD+ N +V DF
Sbjct: 140 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTV 199
Query: 113 MLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT-- 170
+GDFG+ + E Y + + +++PE ++ G +T +DV+SFGVVL ++ T
Sbjct: 200 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLA 259
Query: 171 -----GLKTNDKTLG---EKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAK 222
GL +N++ L E GL L K N PD++ ++ +
Sbjct: 260 EQPYQGL-SNEQVLRFVMEGGL------LDKPDNCPDML----------------FELMR 296
Query: 223 KCLSKDPQKRLPMDTVVDALKSIME 247
C +P+ R ++ ++K ME
Sbjct: 297 MCWQYNPKMRPSFLEIISSIKEEME 321
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 125/265 (47%), Gaps = 42/265 (15%)
Query: 2 IAVKQHKDASSQGDR-EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K +A+S +R EF +E V+ + +VV LLG S G L++ E + G L
Sbjct: 48 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 107
Query: 61 HL--------SKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEP 112
+L + P S K +++A A G+ YL+ N +HRD+ N +V DF
Sbjct: 108 YLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTV 167
Query: 113 MLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT-- 170
+GDFG+ + E Y + + +++PE ++ G +T +DV+SFGVVL ++ T
Sbjct: 168 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLA 227
Query: 171 -----GLKTNDKTLG---EKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAK 222
GL +N++ L E GL L K N PD++ ++ +
Sbjct: 228 EQPYQGL-SNEQVLRFVMEGGL------LDKPDNCPDML----------------FELMR 264
Query: 223 KCLSKDPQKRLPMDTVVDALKSIME 247
C +P+ R ++ ++K ME
Sbjct: 265 MCWQYNPKMRPSFLEIISSIKEEME 289
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 125/265 (47%), Gaps = 42/265 (15%)
Query: 2 IAVKQHKDASSQGDR-EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K +A+S +R EF +E V+ + +VV LLG S G L++ E + G L
Sbjct: 51 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 110
Query: 61 HL--------SKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEP 112
+L + P S K +++A A G+ YL+ N +HRD+ N +V DF
Sbjct: 111 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTV 170
Query: 113 MLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT-- 170
+GDFG+ + E Y + + +++PE ++ G +T +DV+SFGVVL ++ T
Sbjct: 171 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLA 230
Query: 171 -----GLKTNDKTLG---EKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAK 222
GL +N++ L E GL L K N PD++ ++ +
Sbjct: 231 EQPYQGL-SNEQVLRFVMEGGL------LDKPDNCPDML----------------FELMR 267
Query: 223 KCLSKDPQKRLPMDTVVDALKSIME 247
C +P+ R ++ ++K ME
Sbjct: 268 MCWQYNPKMRPSFLEIISSIKEEME 292
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 125/265 (47%), Gaps = 42/265 (15%)
Query: 2 IAVKQHKDASSQGDR-EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K +A+S +R EF +E V+ + +VV LLG S G L++ E + G L
Sbjct: 51 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 110
Query: 61 HL--------SKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEP 112
+L + P S K +++A A G+ YL+ N +HRD+ N +V DF
Sbjct: 111 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTV 170
Query: 113 MLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT-- 170
+GDFG+ + E Y + + +++PE ++ G +T +DV+SFGVVL ++ T
Sbjct: 171 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLA 230
Query: 171 -----GLKTNDKTLG---EKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAK 222
GL +N++ L E GL L K N PD++ ++ +
Sbjct: 231 EQPYQGL-SNEQVLRFVMEGGL------LDKPDNCPDML----------------FELMR 267
Query: 223 KCLSKDPQKRLPMDTVVDALKSIME 247
C +P+ R ++ ++K ME
Sbjct: 268 MCWQYNPKMRPSFLEIISSIKEEME 292
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 98/171 (57%), Gaps = 10/171 (5%)
Query: 2 IAVKQHK-DASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRL-LVYEYVCNGSLD 59
+AVK K DA++Q F +E V+++ RH N+V LLG + L +V EY+ GSL
Sbjct: 38 VAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 94
Query: 60 QHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGL 119
+L R+ L + +K +L + ++YL NN +HRD+ N+LV+ D + DFGL
Sbjct: 95 DYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGL 154
Query: 120 AKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
K ++ + +TG + + + APE + STK+DV+SFG++L ++ +
Sbjct: 155 TK----EASSTQDTGKL-PVKWTAPEALREAAFSTKSDVWSFGILLWEIYS 200
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 125/265 (47%), Gaps = 42/265 (15%)
Query: 2 IAVKQHKDASSQGDR-EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K +A+S +R EF +E V+ + +VV LLG S G L++ E + G L
Sbjct: 45 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 104
Query: 61 HL--------SKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEP 112
+L + P S K +++A A G+ YL+ N +HRD+ N +V DF
Sbjct: 105 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTV 164
Query: 113 MLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT-- 170
+GDFG+ + E Y + + +++PE ++ G +T +DV+SFGVVL ++ T
Sbjct: 165 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLA 224
Query: 171 -----GLKTNDKTLG---EKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAK 222
GL +N++ L E GL L K N PD++ ++ +
Sbjct: 225 EQPYQGL-SNEQVLRFVMEGGL------LDKPDNCPDML----------------FELMR 261
Query: 223 KCLSKDPQKRLPMDTVVDALKSIME 247
C +P+ R ++ ++K ME
Sbjct: 262 MCWQYNPKMRPSFLEIISSIKEEME 286
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 125/265 (47%), Gaps = 42/265 (15%)
Query: 2 IAVKQHKDASSQGDR-EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K +A+S +R EF +E V+ + +VV LLG S G L++ E + G L
Sbjct: 52 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 111
Query: 61 HL--------SKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEP 112
+L + P S K +++A A G+ YL+ N +HRD+ N +V DF
Sbjct: 112 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTV 171
Query: 113 MLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT-- 170
+GDFG+ + E Y + + +++PE ++ G +T +DV+SFGVVL ++ T
Sbjct: 172 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLA 231
Query: 171 -----GLKTNDKTLG---EKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAK 222
GL +N++ L E GL L K N PD++ ++ +
Sbjct: 232 EQPYQGL-SNEQVLRFVMEGGL------LDKPDNCPDML----------------FELMR 268
Query: 223 KCLSKDPQKRLPMDTVVDALKSIME 247
C +P+ R ++ ++K ME
Sbjct: 269 MCWQYNPKMRPSFLEIISSIKEEME 293
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 125/265 (47%), Gaps = 42/265 (15%)
Query: 2 IAVKQHKDASSQGDR-EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K +A+S +R EF +E V+ + +VV LLG S G L++ E + G L
Sbjct: 49 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 108
Query: 61 HL--------SKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEP 112
+L + P S K +++A A G+ YL+ N +HRD+ N +V DF
Sbjct: 109 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTV 168
Query: 113 MLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT-- 170
+GDFG+ + E Y + + +++PE ++ G +T +DV+SFGVVL ++ T
Sbjct: 169 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLA 228
Query: 171 -----GLKTNDKTLG---EKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAK 222
GL +N++ L E GL L K N PD++ ++ +
Sbjct: 229 EQPYQGL-SNEQVLRFVMEGGL------LDKPDNCPDML----------------FELMR 265
Query: 223 KCLSKDPQKRLPMDTVVDALKSIME 247
C +P+ R ++ ++K ME
Sbjct: 266 MCWQYNPKMRPSFLEIISSIKEEME 290
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 123/262 (46%), Gaps = 40/262 (15%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+AVK K S D F +E ++ + +H+ +V L + ++ EY+ NGSL
Sbjct: 50 VAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDF 107
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L + L+ K + +A A+G+ ++ E N IHRD+ NILV+ + DFGLA+
Sbjct: 108 LKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 167
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTNDKTLGE 181
ED++Y+ G + + APE + G + K+DV+SFG++L +++T +
Sbjct: 168 L-IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI------- 219
Query: 182 KGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMV----------QIAKKCLSKDPQK 231
YP + +P +I ++ + + MV Q+ + C + P+
Sbjct: 220 --------------PYPGMTNPEVIQ--NLERGYRMVRPDNCPEELYQLMRLCWKERPED 263
Query: 232 RLPMDTVVDALKSIMEGTATSN 253
R D L+S++E T+
Sbjct: 264 R----PTFDYLRSVLEDFFTAT 281
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 123/261 (47%), Gaps = 40/261 (15%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+AVK K S D F +E ++ + +H+ +V L + ++ EY+ NGSL
Sbjct: 46 VAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDF 103
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L + L+ K + +A A+G+ ++ E N IHRD+ NILV+ + DFGLA+
Sbjct: 104 LKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 163
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTNDKTLGE 181
ED++Y+ G + + APE + G + K+DV+SFG++L +++T +
Sbjct: 164 LI-EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI------- 215
Query: 182 KGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMV----------QIAKKCLSKDPQK 231
YP + +P +I ++ + + MV Q+ + C + P+
Sbjct: 216 --------------PYPGMTNPEVIQ--NLERGYRMVRPDNCPEELYQLMRLCWKERPED 259
Query: 232 RLPMDTVVDALKSIMEGTATS 252
R D L+S++E T+
Sbjct: 260 R----PTFDYLRSVLEDFFTA 276
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 123/261 (47%), Gaps = 40/261 (15%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+AVK K S D F +E ++ + +H+ +V L + ++ EY+ NGSL
Sbjct: 40 VAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDF 97
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L + L+ K + +A A+G+ ++ E N IHRD+ NILV+ + DFGLA+
Sbjct: 98 LKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 157
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTNDKTLGE 181
ED++Y+ G + + APE + G + K+DV+SFG++L +++T +
Sbjct: 158 LI-EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI------- 209
Query: 182 KGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMV----------QIAKKCLSKDPQK 231
YP + +P +I ++ + + MV Q+ + C + P+
Sbjct: 210 --------------PYPGMTNPEVIQ--NLERGYRMVRPDNCPEELYQLMRLCWKERPED 253
Query: 232 RLPMDTVVDALKSIMEGTATS 252
R D L+S++E T+
Sbjct: 254 R----PTFDYLRSVLEDFFTA 270
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 101/192 (52%), Gaps = 23/192 (11%)
Query: 2 IAVKQHKDASSQGDRE-FKSEVQVLSK-ARHENVVMLLGSCSDGNKRLLVYEYVCNGSLD 59
+AVK K+ + +RE SE++++++ HEN+V LLG+C+ L++EY C G L
Sbjct: 78 VAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLL 137
Query: 60 QHL-SKHTRTP--------------------LSWEKRMKIALGAAKGLQYLHENNIIHRD 98
+L SK + L++E + A AKG+++L + +HRD
Sbjct: 138 NYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRD 197
Query: 99 MGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDV 158
+ N+LVTH + DFGLA+ DS+Y + ++APE + G + K+DV
Sbjct: 198 LAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDV 257
Query: 159 YSFGVVLLQLIT 170
+S+G++L ++ +
Sbjct: 258 WSYGILLWEIFS 269
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 123/261 (47%), Gaps = 40/261 (15%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+AVK K S D F +E ++ + +H+ +V L + ++ EY+ NGSL
Sbjct: 45 VAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDF 102
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L + L+ K + +A A+G+ ++ E N IHRD+ NILV+ + DFGLA+
Sbjct: 103 LKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 162
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTNDKTLGE 181
ED++Y+ G + + APE + G + K+DV+SFG++L +++T +
Sbjct: 163 LI-EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI------- 214
Query: 182 KGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMV----------QIAKKCLSKDPQK 231
YP + +P +I ++ + + MV Q+ + C + P+
Sbjct: 215 --------------PYPGMTNPEVIQ--NLERGYRMVRPDNCPEELYQLMRLCWKERPED 258
Query: 232 RLPMDTVVDALKSIMEGTATS 252
R D L+S++E T+
Sbjct: 259 R----PTFDYLRSVLEDFFTA 275
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 123/261 (47%), Gaps = 40/261 (15%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+AVK K S D F +E ++ + +H+ +V L + ++ EY+ NGSL
Sbjct: 35 VAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDF 92
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L + L+ K + +A A+G+ ++ E N IHRD+ NILV+ + DFGLA+
Sbjct: 93 LKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 152
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTNDKTLGE 181
ED++Y+ G + + APE + G + K+DV+SFG++L +++T +
Sbjct: 153 LI-EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI------- 204
Query: 182 KGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMV----------QIAKKCLSKDPQK 231
YP + +P +I ++ + + MV Q+ + C + P+
Sbjct: 205 --------------PYPGMTNPEVIQ--NLERGYRMVRPDNCPEELYQLMRLCWKERPED 248
Query: 232 RLPMDTVVDALKSIMEGTATS 252
R D L+S++E T+
Sbjct: 249 R----PTFDYLRSVLEDFFTA 265
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 98/183 (53%), Gaps = 14/183 (7%)
Query: 2 IAVKQHKDASSQGDRE-FKSEVQVLSK-ARHENVVMLLGSCSDGNKRLLVYEYVCNGSLD 59
+AVK K + ++E SE++++S +HEN+V LLG+C+ G L++ EY C G L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 60 QHLSKHTR------------TPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVT 107
L + +R + S + + A+G+ +L N IHRD+ N+L+T
Sbjct: 139 NFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT 198
Query: 108 HDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQ 167
+ +GDFGLA+ DS+Y + + ++APE + + ++DV+S+G++L +
Sbjct: 199 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWE 258
Query: 168 LIT 170
+ +
Sbjct: 259 IFS 261
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 125/265 (47%), Gaps = 42/265 (15%)
Query: 2 IAVKQHKDASSQGDR-EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K +A+S +R EF +E V+ + +VV LLG S G L++ E + G L
Sbjct: 45 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 104
Query: 61 HL--------SKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEP 112
+L + P S K +++A A G+ YL+ N +HRD+ N V DF
Sbjct: 105 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCXVAEDFTV 164
Query: 113 MLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT-- 170
+GDFG+ + E Y + + +++PE ++ G +T +DV+SFGVVL ++ T
Sbjct: 165 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLA 224
Query: 171 -----GLKTNDKTLG---EKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAK 222
GL +N++ L E GL L K N PD++ +++ +
Sbjct: 225 EQPYQGL-SNEQVLRFVMEGGL------LDKPDNCPDML----------------LELMR 261
Query: 223 KCLSKDPQKRLPMDTVVDALKSIME 247
C +P+ R ++ ++K ME
Sbjct: 262 MCWQYNPKMRPSFLEIISSIKEEME 286
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 93/174 (53%), Gaps = 6/174 (3%)
Query: 1 MIAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKR--LLVYEYVCNGSL 58
++AVK+ + ++ + R+F+ E+++L +H+N+V G C +R L+ EY+ GSL
Sbjct: 44 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 103
Query: 59 DQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFG 118
+L H + K ++ KG++YL IHRD+ NILV ++ +GDFG
Sbjct: 104 RDYLQAHAER-IDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 162
Query: 119 LAKTQREDSDYS--TETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
L K +D + E G Y APE + K S +DV+SFGVVL +L T
Sbjct: 163 LTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 125/265 (47%), Gaps = 42/265 (15%)
Query: 2 IAVKQHKDASSQGDR-EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K +A+S +R EF +E V+ + +VV LLG S G L++ E + G L
Sbjct: 43 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 102
Query: 61 HL--------SKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEP 112
+L + P S K +++A A G+ YL+ N +HRD+ N +V DF
Sbjct: 103 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTV 162
Query: 113 MLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT-- 170
+GDFG+ + E + + +++PE ++ G +T +DV+SFGVVL ++ T
Sbjct: 163 KIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLA 222
Query: 171 -----GLKTNDKTLG---EKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAK 222
GL +N++ L E GL L K N PD++ +++ +
Sbjct: 223 EQPYQGL-SNEQVLRFVMEGGL------LDKPDNCPDML----------------LELMR 259
Query: 223 KCLSKDPQKRLPMDTVVDALKSIME 247
C +P+ R ++ ++K ME
Sbjct: 260 MCWQYNPKMRPSFLEIISSIKEEME 284
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 120/259 (46%), Gaps = 44/259 (16%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+A+KQ + S + + F E++ LS+ H N+V L G+C N LV EY GSL
Sbjct: 34 VAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNV 89
Query: 62 LSKHTRTPLSW---EKRMKIALGAAKGLQYLHE---NNIIHRDMGPNNILVTHDFEPM-L 114
L H PL + M L ++G+ YLH +IHRD+ P N+L+ + +
Sbjct: 90 L--HGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKI 147
Query: 115 GDFGLAKTQREDSDYSTE-TGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLK 173
DFG A D T T G+ ++APE E S K DV+S+G++L ++IT K
Sbjct: 148 CDFGTA------CDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRK 201
Query: 174 TNDKTLGEKGLVGWA------RPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSK 227
D+ G + WA PL+K N P I+ + +C SK
Sbjct: 202 PFDEIGGPAFRIMWAVHNGTRPPLIK--NLPKPIE----------------SLMTRCWSK 243
Query: 228 DPQKRLPMDTVVDALKSIM 246
DP +R M+ +V + +M
Sbjct: 244 DPSQRPSMEEIVKIMTHLM 262
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 123/261 (47%), Gaps = 40/261 (15%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+AVK K S D F +E ++ + +H+ +V L + ++ EY+ NGSL
Sbjct: 36 VAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDF 93
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L + L+ K + +A A+G+ ++ E N IHR++ NILV+ + DFGLA+
Sbjct: 94 LKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRNLRAANILVSDTLSCKIADFGLAR 153
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTNDKTLGE 181
ED++Y+ G + + APE + G + K+DV+SFG++L +++T +
Sbjct: 154 LI-EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI------- 205
Query: 182 KGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMV----------QIAKKCLSKDPQK 231
YP + +P +I ++ + + MV Q+ + C + P+
Sbjct: 206 --------------PYPGMTNPEVIQ--NLERGYRMVRPDNCPEELYQLMRLCWKERPED 249
Query: 232 RLPMDTVVDALKSIMEGTATS 252
R D L+S++E T+
Sbjct: 250 R----PTFDYLRSVLEDFFTA 266
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 120/258 (46%), Gaps = 42/258 (16%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+A+KQ + S + + F E++ LS+ H N+V L G+C N LV EY GSL
Sbjct: 35 VAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNV 90
Query: 62 LSKHTRTPLSW---EKRMKIALGAAKGLQYLHE---NNIIHRDMGPNNILVTHDFEPM-L 114
L H PL + M L ++G+ YLH +IHRD+ P N+L+ + +
Sbjct: 91 L--HGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKI 148
Query: 115 GDFGLAKTQREDSDYSTE-TGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLK 173
DFG A D T T G+ ++APE E S K DV+S+G++L ++IT K
Sbjct: 149 CDFGTA------CDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRK 202
Query: 174 TNDKTLGEKGLVGWA-----RPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKD 228
D+ G + WA RP L +N P I+ + +C SKD
Sbjct: 203 PFDEIGGPAFRIMWAVHNGTRPPLI-KNLPKPIE----------------SLMTRCWSKD 245
Query: 229 PQKRLPMDTVVDALKSIM 246
P +R M+ +V + +M
Sbjct: 246 PSQRPSMEEIVKIMTHLM 263
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 124/265 (46%), Gaps = 42/265 (15%)
Query: 2 IAVKQHKDASSQGDR-EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K +A+S +R EF +E V+ + +VV LLG S G L++ E + G L
Sbjct: 52 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 111
Query: 61 HL--------SKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEP 112
+L + P S K +++A A G+ YL+ N +HRD+ N +V DF
Sbjct: 112 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTV 171
Query: 113 MLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT-- 170
+GDFG+ + E + + +++PE ++ G +T +DV+SFGVVL ++ T
Sbjct: 172 KIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLA 231
Query: 171 -----GLKTNDKTLG---EKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAK 222
GL +N++ L E GL L K N PD++ ++ +
Sbjct: 232 EQPYQGL-SNEQVLRFVMEGGL------LDKPDNCPDML----------------FELMR 268
Query: 223 KCLSKDPQKRLPMDTVVDALKSIME 247
C +P+ R ++ ++K ME
Sbjct: 269 MCWQYNPKMRPSFLEIISSIKEEME 293
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 96/178 (53%), Gaps = 9/178 (5%)
Query: 2 IAVKQHKDASSQGDR-EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+AVK +++S +R EF +E V+ +VV LLG S G L+V E + +G L
Sbjct: 50 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 109
Query: 61 HL--------SKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEP 112
+L + R P + ++ +++A A G+ YL+ +HRD+ N +V HDF
Sbjct: 110 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTV 169
Query: 113 MLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+GDFG+ + E + Y + + ++APE ++ G +T +D++SFGVVL ++ +
Sbjct: 170 KIGDFGMTRDIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 97/185 (52%), Gaps = 16/185 (8%)
Query: 2 IAVKQHKDASSQGDRE-FKSEVQVLSK-ARHENVVMLLGSCSDGNKRLLVYEYVCNGSLD 59
+AVK K + ++E SE++++S +HEN+V LLG+C+ G L++ EY C G L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 60 QHL--------------SKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNIL 105
L S + LS + + A+G+ +L N IHRD+ N+L
Sbjct: 139 NFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVL 198
Query: 106 VTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVL 165
+T+ +GDFGLA+ DS+Y + + ++APE + + ++DV+S+G++L
Sbjct: 199 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILL 258
Query: 166 LQLIT 170
++ +
Sbjct: 259 WEIFS 263
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 97/192 (50%), Gaps = 23/192 (11%)
Query: 2 IAVKQHKDASSQGDRE-FKSEVQVLSK-ARHENVVMLLGSCSDGNKRLLVYEYVCNGSL- 58
+AVK K + ++E SE++++S +HEN+V LLG+C+ G L++ EY C G L
Sbjct: 64 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 123
Query: 59 --------------------DQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRD 98
+ L K PL + + A+G+ +L N IHRD
Sbjct: 124 NFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRD 183
Query: 99 MGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDV 158
+ N+L+T+ +GDFGLA+ DS+Y + + ++APE + + ++DV
Sbjct: 184 VAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDV 243
Query: 159 YSFGVVLLQLIT 170
+S+G++L ++ +
Sbjct: 244 WSYGILLWEIFS 255
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 119/267 (44%), Gaps = 31/267 (11%)
Query: 2 IAVKQHKDASSQGDRE-FKSEVQVLSK-ARHENVVMLLGSCSDGNKRLLVYEYVCNGSLD 59
+AVK K ++ +RE SE++VLS H N+V LLG+C+ G L++ EY C G L
Sbjct: 79 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 138
Query: 60 QHLSKHTRTPLSWEKRMKI----------------ALGAAKGLQYLHENNIIHRDMGPNN 103
L + + + + I + AKG+ +L N IHRD+ N
Sbjct: 139 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARN 198
Query: 104 ILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGV 163
IL+TH + DFGLA+ + DS+Y + + ++APE + + ++DV+S+G+
Sbjct: 199 ILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGI 258
Query: 164 VLLQLITGLKTNDKTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKK 223
L +L +LG G + + + +I H M I K
Sbjct: 259 FLWELF--------SLGSSPYPG----MPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKT 306
Query: 224 CLSKDPQKRLPMDTVVDAL-KSIMEGT 249
C DP KR +V + K I E T
Sbjct: 307 CWDADPLKRPTFKQIVQLIEKQISEST 333
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 119/267 (44%), Gaps = 31/267 (11%)
Query: 2 IAVKQHKDASSQGDRE-FKSEVQVLSK-ARHENVVMLLGSCSDGNKRLLVYEYVCNGSLD 59
+AVK K ++ +RE SE++VLS H N+V LLG+C+ G L++ EY C G L
Sbjct: 74 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 133
Query: 60 QHLSKHTRTPLSWEKRMKI----------------ALGAAKGLQYLHENNIIHRDMGPNN 103
L + + + + I + AKG+ +L N IHRD+ N
Sbjct: 134 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARN 193
Query: 104 ILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGV 163
IL+TH + DFGLA+ + DS+Y + + ++APE + + ++DV+S+G+
Sbjct: 194 ILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGI 253
Query: 164 VLLQLITGLKTNDKTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKK 223
L +L +LG G + + + +I H M I K
Sbjct: 254 FLWELF--------SLGSSPYPG----MPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKT 301
Query: 224 CLSKDPQKRLPMDTVVDAL-KSIMEGT 249
C DP KR +V + K I E T
Sbjct: 302 CWDADPLKRPTFKQIVQLIEKQISEST 328
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 95/178 (53%), Gaps = 9/178 (5%)
Query: 2 IAVKQHKDASSQGDR-EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+AVK +++S +R EF +E V+ +VV LLG S G L+V E + +G L
Sbjct: 50 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 109
Query: 61 HL--------SKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEP 112
+L + R P + ++ +++A A G+ YL+ +HRD+ N +V HDF
Sbjct: 110 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTV 169
Query: 113 MLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+GDFG+ + E Y + + ++APE ++ G +T +D++SFGVVL ++ +
Sbjct: 170 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 119/267 (44%), Gaps = 31/267 (11%)
Query: 2 IAVKQHKDASSQGDRE-FKSEVQVLSK-ARHENVVMLLGSCSDGNKRLLVYEYVCNGSLD 59
+AVK K ++ +RE SE++VLS H N+V LLG+C+ G L++ EY C G L
Sbjct: 72 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 131
Query: 60 QHLSKHTRTPLSWEKRMKI----------------ALGAAKGLQYLHENNIIHRDMGPNN 103
L + + + + I + AKG+ +L N IHRD+ N
Sbjct: 132 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARN 191
Query: 104 ILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGV 163
IL+TH + DFGLA+ + DS+Y + + ++APE + + ++DV+S+G+
Sbjct: 192 ILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGI 251
Query: 164 VLLQLITGLKTNDKTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKK 223
L +L +LG G + + + +I H M I K
Sbjct: 252 FLWELF--------SLGSSPYPG----MPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKT 299
Query: 224 CLSKDPQKRLPMDTVVDAL-KSIMEGT 249
C DP KR +V + K I E T
Sbjct: 300 CWDADPLKRPTFKQIVQLIEKQISEST 326
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 119/267 (44%), Gaps = 31/267 (11%)
Query: 2 IAVKQHKDASSQGDRE-FKSEVQVLSK-ARHENVVMLLGSCSDGNKRLLVYEYVCNGSLD 59
+AVK K ++ +RE SE++VLS H N+V LLG+C+ G L++ EY C G L
Sbjct: 79 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 138
Query: 60 QHLSKHTRTPLSWEKRMKI----------------ALGAAKGLQYLHENNIIHRDMGPNN 103
L + + + + I + AKG+ +L N IHRD+ N
Sbjct: 139 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARN 198
Query: 104 ILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGV 163
IL+TH + DFGLA+ + DS+Y + + ++APE + + ++DV+S+G+
Sbjct: 199 ILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGI 258
Query: 164 VLLQLITGLKTNDKTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKK 223
L +L +LG G + + + +I H M I K
Sbjct: 259 FLWELF--------SLGSSPYPG----MPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKT 306
Query: 224 CLSKDPQKRLPMDTVVDAL-KSIMEGT 249
C DP KR +V + K I E T
Sbjct: 307 CWDADPLKRPTFKQIVQLIEKQISEST 333
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 119/267 (44%), Gaps = 31/267 (11%)
Query: 2 IAVKQHKDASSQGDRE-FKSEVQVLSK-ARHENVVMLLGSCSDGNKRLLVYEYVCNGSLD 59
+AVK K ++ +RE SE++VLS H N+V LLG+C+ G L++ EY C G L
Sbjct: 56 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 115
Query: 60 QHLSKHTRTPLSWEKRMKI----------------ALGAAKGLQYLHENNIIHRDMGPNN 103
L + + + + I + AKG+ +L N IHRD+ N
Sbjct: 116 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARN 175
Query: 104 ILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGV 163
IL+TH + DFGLA+ + DS+Y + + ++APE + + ++DV+S+G+
Sbjct: 176 ILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGI 235
Query: 164 VLLQLITGLKTNDKTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKK 223
L +L +LG G + + + +I H M I K
Sbjct: 236 FLWELF--------SLGSSPYPG----MPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKT 283
Query: 224 CLSKDPQKRLPMDTVVDAL-KSIMEGT 249
C DP KR +V + K I E T
Sbjct: 284 CWDADPLKRPTFKQIVQLIEKQISEST 310
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 122/262 (46%), Gaps = 40/262 (15%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+AVK K S D F +E ++ + +H+ +V L + ++ EY+ NGSL
Sbjct: 40 VAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDF 97
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L + L+ K + +A A+G+ ++ E N IHRD+ NILV+ + DFGLA+
Sbjct: 98 LKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 157
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTNDKTLGE 181
ED++ + G + + APE + G + K+DV+SFG++L +++T +
Sbjct: 158 LI-EDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI------- 209
Query: 182 KGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMV----------QIAKKCLSKDPQK 231
YP + +P +I ++ + + MV Q+ + C + P+
Sbjct: 210 --------------PYPGMTNPEVIQ--NLERGYRMVRPDNCPEELYQLMRLCWKERPED 253
Query: 232 RLPMDTVVDALKSIMEGTATSN 253
R D L+S++E T+
Sbjct: 254 R----PTFDYLRSVLEDFFTAT 271
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 122/261 (46%), Gaps = 40/261 (15%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+AVK K S D F +E ++ + +H+ +V L + ++ EY+ NGSL
Sbjct: 40 VAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDF 97
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L + L+ K + +A A+G+ ++ E N IHRD+ NILV+ + DFGLA+
Sbjct: 98 LKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 157
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTNDKTLGE 181
ED++ + G + + APE + G + K+DV+SFG++L +++T +
Sbjct: 158 LI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI------- 209
Query: 182 KGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMV----------QIAKKCLSKDPQK 231
YP + +P +I ++ + + MV Q+ + C + P+
Sbjct: 210 --------------PYPGMTNPEVIQ--NLERGYRMVRPDNCPEELYQLMRLCWKERPED 253
Query: 232 RLPMDTVVDALKSIMEGTATS 252
R D L+S++E T+
Sbjct: 254 R----PTFDYLRSVLEDFFTA 270
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 95/178 (53%), Gaps = 9/178 (5%)
Query: 2 IAVKQHKDASSQGDR-EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+AVK +++S +R EF +E V+ +VV LLG S G L+V E + +G L
Sbjct: 49 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 108
Query: 61 HL--------SKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEP 112
+L + R P + ++ +++A A G+ YL+ +HRD+ N +V HDF
Sbjct: 109 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTV 168
Query: 113 MLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+GDFG+ + E Y + + ++APE ++ G +T +D++SFGVVL ++ +
Sbjct: 169 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 226
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 122/261 (46%), Gaps = 40/261 (15%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+AVK K S D F +E ++ + +H+ +V L + ++ EY+ NGSL
Sbjct: 46 VAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDF 103
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L + L+ K + +A A+G+ ++ E N IHRD+ NILV+ + DFGLA+
Sbjct: 104 LKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 163
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTNDKTLGE 181
ED++ + G + + APE + G + K+DV+SFG++L +++T +
Sbjct: 164 L-IEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI------- 215
Query: 182 KGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMV----------QIAKKCLSKDPQK 231
YP + +P +I ++ + + MV Q+ + C + P+
Sbjct: 216 --------------PYPGMTNPEVIQ--NLERGYRMVRPDNCPEELYQLMRLCWKERPED 259
Query: 232 RLPMDTVVDALKSIMEGTATS 252
R D L+S++E T+
Sbjct: 260 R----PTFDYLRSVLEDFFTA 276
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 122/262 (46%), Gaps = 40/262 (15%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+AVK K S D F +E ++ + +H+ +V L + ++ EY+ NGSL
Sbjct: 49 VAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDF 106
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L + L+ K + +A A+G+ ++ E N IHRD+ NILV+ + DFGLA+
Sbjct: 107 LKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 166
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTNDKTLGE 181
ED++ + G + + APE + G + K+DV+SFG++L +++T +
Sbjct: 167 LI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI------- 218
Query: 182 KGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMV----------QIAKKCLSKDPQK 231
YP + +P +I ++ + + MV Q+ + C + P+
Sbjct: 219 --------------PYPGMTNPEVIQ--NLERGYRMVRPDNCPEELYQLMRLCWKERPED 262
Query: 232 RLPMDTVVDALKSIMEGTATSN 253
R D L+S++E T+
Sbjct: 263 R----PTFDYLRSVLEDFFTAT 280
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 122/261 (46%), Gaps = 40/261 (15%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+AVK K S D F +E ++ + +H+ +V L + ++ EY+ NGSL
Sbjct: 48 VAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDF 105
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L + L+ K + +A A+G+ ++ E N IHRD+ NILV+ + DFGLA+
Sbjct: 106 LKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 165
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTNDKTLGE 181
ED++ + G + + APE + G + K+DV+SFG++L +++T +
Sbjct: 166 L-IEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI------- 217
Query: 182 KGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMV----------QIAKKCLSKDPQK 231
YP + +P +I ++ + + MV Q+ + C + P+
Sbjct: 218 --------------PYPGMTNPEVIQ--NLERGYRMVRPDNCPEELYQLMRLCWKERPED 261
Query: 232 RLPMDTVVDALKSIMEGTATS 252
R D L+S++E T+
Sbjct: 262 R----PTFDYLRSVLEDFFTA 278
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 122/261 (46%), Gaps = 40/261 (15%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+AVK K S D F +E ++ + +H+ +V L + ++ EY+ NGSL
Sbjct: 42 VAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDF 99
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L + L+ K + +A A+G+ ++ E N IHRD+ NILV+ + DFGLA+
Sbjct: 100 LKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 159
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTNDKTLGE 181
ED++ + G + + APE + G + K+DV+SFG++L +++T +
Sbjct: 160 LI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI------- 211
Query: 182 KGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMV----------QIAKKCLSKDPQK 231
YP + +P +I ++ + + MV Q+ + C + P+
Sbjct: 212 --------------PYPGMTNPEVIQ--NLERGYRMVRPDNCPEELYQLMRLCWKERPED 255
Query: 232 RLPMDTVVDALKSIMEGTATS 252
R D L+S++E T+
Sbjct: 256 R----PTFDYLRSVLEDFFTA 272
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 88/169 (52%), Gaps = 3/169 (1%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+A+K K + + F E QV+ K RHE +V L S+ +V EY+ GSL
Sbjct: 38 VAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDF 95
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L T L + + +A A G+ Y+ N +HRD+ NILV + + DFGLA+
Sbjct: 96 LKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR 155
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
ED++Y+ G + + APE G+ + K+DV+SFG++L +L T
Sbjct: 156 LI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 203
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 122/261 (46%), Gaps = 40/261 (15%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+AVK K S D F +E ++ + +H+ +V L + ++ EY+ NGSL
Sbjct: 40 VAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDF 97
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L + L+ K + +A A+G+ ++ E N IHRD+ NILV+ + DFGLA+
Sbjct: 98 LKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 157
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTNDKTLGE 181
ED++ + G + + APE + G + K+DV+SFG++L +++T +
Sbjct: 158 LI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI------- 209
Query: 182 KGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMV----------QIAKKCLSKDPQK 231
YP + +P +I ++ + + MV Q+ + C + P+
Sbjct: 210 --------------PYPGMTNPEVIQ--NLERGYRMVRPDNCPEELYQLMRLCWKERPED 253
Query: 232 RLPMDTVVDALKSIMEGTATS 252
R D L+S++E T+
Sbjct: 254 R----PTFDYLRSVLEDFFTA 270
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 122/261 (46%), Gaps = 40/261 (15%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+AVK K S D F +E ++ + +H+ +V L + ++ EY+ NGSL
Sbjct: 41 VAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDF 98
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L + L+ K + +A A+G+ ++ E N IHRD+ NILV+ + DFGLA+
Sbjct: 99 LKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 158
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTNDKTLGE 181
ED++ + G + + APE + G + K+DV+SFG++L +++T +
Sbjct: 159 LI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI------- 210
Query: 182 KGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMV----------QIAKKCLSKDPQK 231
YP + +P +I ++ + + MV Q+ + C + P+
Sbjct: 211 --------------PYPGMTNPEVIQ--NLERGYRMVRPDNCPEELYQLMRLCWKERPED 254
Query: 232 RLPMDTVVDALKSIMEGTATS 252
R D L+S++E T+
Sbjct: 255 R----PTFDYLRSVLEDFFTA 271
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 93/175 (53%), Gaps = 9/175 (5%)
Query: 1 MIAVKQHK-DASSQGDREFKSEVQVLSKARHENVVMLLGSCSD-GNKRL-LVYEYVCNGS 57
M+AVK K D Q +K E+ +L HE+++ G C D G K L LV EYV GS
Sbjct: 45 MVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGS 104
Query: 58 LDQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDF 117
L +L +H+ + + + A +G+ YLH + IHR++ N+L+ +D +GDF
Sbjct: 105 LRDYLPRHS---IGLAQLLLFAQQICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDF 161
Query: 118 GLAKTQREDSDYS--TETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
GLAK E +Y E G Y APE ++ K +DV+SFGV L +L+T
Sbjct: 162 GLAKAVPEGHEYYRVREDGDSPVFWY-APECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 93/175 (53%), Gaps = 9/175 (5%)
Query: 1 MIAVKQHK-DASSQGDREFKSEVQVLSKARHENVVMLLGSCSD-GNKRL-LVYEYVCNGS 57
M+AVK K D Q +K E+ +L HE+++ G C D G K L LV EYV GS
Sbjct: 45 MVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGS 104
Query: 58 LDQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDF 117
L +L +H+ + + + A +G+ YLH + IHR++ N+L+ +D +GDF
Sbjct: 105 LRDYLPRHS---IGLAQLLLFAQQICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDF 161
Query: 118 GLAKTQREDSDYS--TETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
GLAK E +Y E G Y APE ++ K +DV+SFGV L +L+T
Sbjct: 162 GLAKAVPEGHEYYRVREDGDSPVFWY-APECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 97/193 (50%), Gaps = 23/193 (11%)
Query: 1 MIAVKQHKD-ASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLD 59
M+AVK K+ AS+ +F+ E ++++ + N+V LLG C+ G L++EY+ G L+
Sbjct: 79 MVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLN 138
Query: 60 QHL---SKHTRT-------------------PLSWEKRMKIALGAAKGLQYLHENNIIHR 97
+ L S HT PLS +++ IA A G+ YL E +HR
Sbjct: 139 EFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHR 198
Query: 98 DMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTD 157
D+ N LV + + DFGL++ Y + + ++ PE + + +T++D
Sbjct: 199 DLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESD 258
Query: 158 VYSFGVVLLQLIT 170
V+++GVVL ++ +
Sbjct: 259 VWAYGVVLWEIFS 271
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 92/169 (54%), Gaps = 2/169 (1%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+AVK K+ + + + EF E V+ + +H N+V LLG C+ ++ E++ G+L +
Sbjct: 41 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDY 99
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L + R +S + +A + ++YL + N IHRD+ N LV + + DFGL++
Sbjct: 100 LRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR 159
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
D+ Y+ G + + APE + K S K+DV++FGV+L ++ T
Sbjct: 160 LMTGDT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 92/169 (54%), Gaps = 2/169 (1%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+AVK K+ + + + EF E V+ + +H N+V LLG C+ ++ E++ G+L +
Sbjct: 41 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDY 99
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L + R +S + +A + ++YL + N IHRD+ N LV + + DFGL++
Sbjct: 100 LRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR 159
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
D+ Y+ G + + APE + K S K+DV++FGV+L ++ T
Sbjct: 160 LMTGDT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 92/169 (54%), Gaps = 2/169 (1%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+AVK K+ + + + EF E V+ + +H N+V LLG C+ ++ E++ G+L +
Sbjct: 41 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 99
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L + R +S + +A + ++YL + N IHRD+ N LV + + DFGL++
Sbjct: 100 LRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR 159
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
D+ Y+ G + + APE + K S K+DV++FGV+L ++ T
Sbjct: 160 LMTGDT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 92/169 (54%), Gaps = 2/169 (1%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+AVK K+ + + + EF E V+ + +H N+V LLG C+ ++ E++ G+L +
Sbjct: 46 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 104
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L + R +S + +A + ++YL + N IHRD+ N LV + + DFGL++
Sbjct: 105 LRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR 164
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
D+ Y+ G + + APE + K S K+DV++FGV+L ++ T
Sbjct: 165 LMTGDT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 95/178 (53%), Gaps = 9/178 (5%)
Query: 2 IAVKQHKDASSQGDR-EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+AVK +++S +R EF +E V+ +VV LLG S G L+V E + +G L
Sbjct: 51 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 110
Query: 61 HL--------SKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEP 112
+L + R P + ++ +++A A G+ YL+ +HR++ N +V HDF
Sbjct: 111 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTV 170
Query: 113 MLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+GDFG+ + E Y + + ++APE ++ G +T +D++SFGVVL ++ +
Sbjct: 171 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 95/178 (53%), Gaps = 9/178 (5%)
Query: 2 IAVKQHKDASSQGDR-EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+AVK +++S +R EF +E V+ +VV LLG S G L+V E + +G L
Sbjct: 50 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 109
Query: 61 HL--------SKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEP 112
+L + R P + ++ +++A A G+ YL+ +HR++ N +V HDF
Sbjct: 110 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTV 169
Query: 113 MLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+GDFG+ + E Y + + ++APE ++ G +T +D++SFGVVL ++ +
Sbjct: 170 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 92/174 (52%), Gaps = 7/174 (4%)
Query: 1 MIAVKQHK-DASSQGDREFKSEVQVLSKARHENVVMLLGSCSD-GNKRL-LVYEYVCNGS 57
M+AVK K DA Q +K E+ +L HE+++ G C D G L LV EYV GS
Sbjct: 62 MVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGS 121
Query: 58 LDQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDF 117
L +L +H+ + + + A +G+ YLH + IHRD+ N+L+ +D +GDF
Sbjct: 122 LRDYLPRHS---IGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDF 178
Query: 118 GLAKTQREDSD-YSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
GLAK E + Y + + APE ++ K +DV+SFGV L +L+T
Sbjct: 179 GLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 92/169 (54%), Gaps = 2/169 (1%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+AVK K+ + + + EF E V+ + +H N+V LLG C+ ++ E++ G+L +
Sbjct: 41 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 99
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L + R +S + +A + ++YL + N IHRD+ N LV + + DFGL++
Sbjct: 100 LRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR 159
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
D+ Y+ G + + APE + K S K+DV++FGV+L ++ T
Sbjct: 160 LMTGDT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 119/254 (46%), Gaps = 24/254 (9%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+A+K K + + F E QV+ K RHE +V L S+ +V EY+ GSL
Sbjct: 45 VAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDF 102
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L L + + +A A G+ Y+ N +HRD+ NILV + + DFGLA+
Sbjct: 103 LKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGLAR 162
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTNDKTLGE 181
ED++Y+ G + + APE G+ + K+DV+SFG++L +L T +
Sbjct: 163 L-IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL-----TTKGRVPY 216
Query: 182 KGLVGWARPLLK--ERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQKRLPMDTVV 239
G+V R +L ER Y P + +H L M Q C KDP++R
Sbjct: 217 PGMVN--REVLDQVERGYRMPCPPECPE--SLHDL--MCQ----CWRKDPEER----PTF 262
Query: 240 DALKSIMEGTATSN 253
+ L++ +E TS
Sbjct: 263 EYLQAFLEDYFTST 276
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 125/261 (47%), Gaps = 26/261 (9%)
Query: 2 IAVKQHKDASSQGD-REFKSEVQVLSKARHENVVMLLGSCSD--GNKRLLVYEYVCNGSL 58
+AVK K S + K E+++L HEN+V G C++ GN L+ E++ +GSL
Sbjct: 41 VAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSL 100
Query: 59 DQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFG 118
++L K+ + ++ ++++K A+ KG+ YL +HRD+ N+LV + + +GDFG
Sbjct: 101 KEYLPKN-KNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFG 159
Query: 119 LAKTQREDSDYST-ETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT------- 170
L K D + T + + + APE + K +DV+SFGV L +L+T
Sbjct: 160 LTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSS 219
Query: 171 ----GLKTNDKTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLS 226
LK T G+ + L + + P P D +V+QL +KC
Sbjct: 220 PMALFLKMIGPTHGQMTVTRLVNTLKEGKRLP--CPPNCPD--EVYQLM------RKCWE 269
Query: 227 KDPQKRLPMDTVVDALKSIME 247
P R +++ +++++
Sbjct: 270 FQPSNRTSFQNLIEGFEALLK 290
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 119/274 (43%), Gaps = 31/274 (11%)
Query: 1 MIAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRL---LVYEYVCNGS 57
++AVKQ + + R+F+ E+Q+L KA H + ++ S G R LV EY+ +G
Sbjct: 42 LVAVKQLQHSGPDQQRDFQREIQIL-KALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGC 100
Query: 58 LDQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDF 117
L L +H R L + + + KG++YL +HRD+ NILV + + DF
Sbjct: 101 LRDFLQRH-RARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADF 159
Query: 118 GLAKTQREDSDYST--ETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTN 175
GLAK D DY E G Y APE + S ++DV+SFGVVL +L T +
Sbjct: 160 GLAKLLPLDKDYYVVREPGQSPIFWY-APESLSDNIFSRQSDVWSFGVVLYELFTYCDKS 218
Query: 176 DKTLGEKGLVGWARPLLKERNYPDLID-----------PRIIDC-YDVHQLFWMVQIAKK 223
E + R + ER+ P L P C +VH+L K
Sbjct: 219 CSPSAE-----FLRMMGCERDVPALCRLLELLEEGQRLPAPPACPAEVHELM------KL 267
Query: 224 CLSKDPQKRLPMDTVVDALKSIMEGTATSNIRGF 257
C + PQ R + L + G+ F
Sbjct: 268 CWAPSPQDRPSFSALGPQLDMLWSGSRGCETHAF 301
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 94/178 (52%), Gaps = 9/178 (5%)
Query: 2 IAVKQHKDASSQGDR-EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+AVK +++S +R EF +E V+ +VV LLG S G L+V E + +G L
Sbjct: 50 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 109
Query: 61 HL--------SKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEP 112
+L + R P + ++ +++A A G+ YL+ +HRD+ N +V HDF
Sbjct: 110 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTV 169
Query: 113 MLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+GDFG+ + E + + ++APE ++ G +T +D++SFGVVL ++ +
Sbjct: 170 KIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 88/169 (52%), Gaps = 3/169 (1%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+A+K K + + F E QV+ K RHE +V L S+ +V EY+ GSL
Sbjct: 211 VAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDF 268
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L T L + + +A A G+ Y+ N +HRD+ NILV + + DFGLA+
Sbjct: 269 LKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR 328
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
ED++Y+ G + + APE G+ + K+DV+SFG++L +L T
Sbjct: 329 LI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 376
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 92/171 (53%), Gaps = 3/171 (1%)
Query: 2 IAVKQHKDASSQGDR-EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K K ++ R +F SE ++ + H N++ L G + G ++V EY+ NGSLD
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT 139
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLA 120
L H + + + + G G++YL + +HRD+ N+LV + + DFGL+
Sbjct: 140 FLRTHD-GQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLS 198
Query: 121 KTQREDSDYS-TETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+ +D D + T TG + + APE + S+ +DV+SFGVV+ +++
Sbjct: 199 RVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 94/178 (52%), Gaps = 9/178 (5%)
Query: 2 IAVKQHKDASSQGDR-EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+AVK +++S +R EF +E V+ +VV LLG S G L+V E + +G L
Sbjct: 50 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 109
Query: 61 HL--------SKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEP 112
+L + R P + ++ +++A A G+ YL+ +HRD+ N +V HDF
Sbjct: 110 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTV 169
Query: 113 MLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+GDFG+ + E + + ++APE ++ G +T +D++SFGVVL ++ +
Sbjct: 170 KIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 92/171 (53%), Gaps = 3/171 (1%)
Query: 2 IAVKQHKDASSQGDR-EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K K ++ R +F SE ++ + H N++ L G + G ++V EY+ NGSLD
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT 139
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLA 120
L H + + + + G G++YL + +HRD+ N+LV + + DFGL+
Sbjct: 140 FLRTHD-GQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLS 198
Query: 121 KTQREDSDYS-TETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+ +D D + T TG + + APE + S+ +DV+SFGVV+ +++
Sbjct: 199 RVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 88/169 (52%), Gaps = 3/169 (1%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+A+K K + + F E QV+ K RHE +V L S+ +V EY+ GSL
Sbjct: 211 VAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDF 268
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L T L + + +A A G+ Y+ N +HRD+ NILV + + DFGLA+
Sbjct: 269 LKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR 328
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
ED++Y+ G + + APE G+ + K+DV+SFG++L +L T
Sbjct: 329 LI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 376
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 94/178 (52%), Gaps = 9/178 (5%)
Query: 2 IAVKQHKDASSQGDR-EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+AVK +++S +R EF +E V+ +VV LLG S G L+V E + +G L
Sbjct: 47 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 106
Query: 61 HL--------SKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEP 112
+L + R P + ++ +++A A G+ YL+ +HRD+ N +V HDF
Sbjct: 107 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTV 166
Query: 113 MLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+GDFG+ + E + + ++APE ++ G +T +D++SFGVVL ++ +
Sbjct: 167 KIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 224
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 95/172 (55%), Gaps = 5/172 (2%)
Query: 2 IAVKQHKDASSQGDR-EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K K ++ R +F E ++ + H N++ L G S +++ EY+ NG+LD+
Sbjct: 76 VAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDK 135
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLA 120
L + S + + + G A G++YL N +HRD+ NILV + + DFGL+
Sbjct: 136 FL-REKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLS 194
Query: 121 KTQRED--SDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+ +D + Y+T G + + + APE + K ++ +DV+SFG+V+ +++T
Sbjct: 195 RVLEDDPEATYTTSGGKI-PIRWTAPEAISYRKFTSASDVWSFGIVMWEVMT 245
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 119/274 (43%), Gaps = 31/274 (11%)
Query: 1 MIAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRL---LVYEYVCNGS 57
++AVKQ + + R+F+ E+Q+L KA H + ++ S G R LV EY+ +G
Sbjct: 41 LVAVKQLQHSGPDQQRDFQREIQIL-KALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGC 99
Query: 58 LDQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDF 117
L L +H R L + + + KG++YL +HRD+ NILV + + DF
Sbjct: 100 LRDFLQRH-RARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADF 158
Query: 118 GLAKTQREDSDYST--ETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTN 175
GLAK D DY E G Y APE + S ++DV+SFGVVL +L T +
Sbjct: 159 GLAKLLPLDKDYYVVREPGQSPIFWY-APESLSDNIFSRQSDVWSFGVVLYELFTYCDKS 217
Query: 176 DKTLGEKGLVGWARPLLKERNYPDLID-----------PRIIDC-YDVHQLFWMVQIAKK 223
E + R + ER+ P L P C +VH+L K
Sbjct: 218 CSPSAE-----FLRMMGSERDVPALSRLLELLEEGQRLPAPPACPAEVHELM------KL 266
Query: 224 CLSKDPQKRLPMDTVVDALKSIMEGTATSNIRGF 257
C + PQ R + L + G+ F
Sbjct: 267 CWAPSPQDRPSFSALGPQLDMLWSGSRGCETHAF 300
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 92/169 (54%), Gaps = 2/169 (1%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+AVK K+ + + + EF E V+ + +H N+V LLG C+ ++ E++ G+L +
Sbjct: 46 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDY 104
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L + R ++ + +A + ++YL + N IHRD+ N LV + + DFGL++
Sbjct: 105 LRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR 164
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
D+ Y+ G + + APE + K S K+DV++FGV+L ++ T
Sbjct: 165 LMTGDT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 125/261 (47%), Gaps = 26/261 (9%)
Query: 2 IAVKQHKDASSQGD-REFKSEVQVLSKARHENVVMLLGSCSD--GNKRLLVYEYVCNGSL 58
+AVK K S + K E+++L HEN+V G C++ GN L+ E++ +GSL
Sbjct: 53 VAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSL 112
Query: 59 DQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFG 118
++L K+ + ++ ++++K A+ KG+ YL +HRD+ N+LV + + +GDFG
Sbjct: 113 KEYLPKN-KNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFG 171
Query: 119 LAKTQREDSDYST-ETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT------- 170
L K D + T + + + APE + K +DV+SFGV L +L+T
Sbjct: 172 LTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSS 231
Query: 171 ----GLKTNDKTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLS 226
LK T G+ + L + + P P D +V+QL +KC
Sbjct: 232 PMALFLKMIGPTHGQMTVTRLVNTLKEGKRLP--CPPNCPD--EVYQLM------RKCWE 281
Query: 227 KDPQKRLPMDTVVDALKSIME 247
P R +++ +++++
Sbjct: 282 FQPSNRTSFQNLIEGFEALLK 302
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 104/244 (42%), Gaps = 25/244 (10%)
Query: 1 MIAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
++ +K+ + R F EV+V+ H NV+ +G + + EY+ G+L +
Sbjct: 37 VMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTL-R 95
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLA 120
+ K + W +R+ A A G+ YLH NIIHRD+ +N LV + ++ DFGLA
Sbjct: 96 GIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLA 155
Query: 121 ------KTQRE------DSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQL 168
KTQ E D VVG ++APE + K DV+SFG+VL ++
Sbjct: 156 RLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEI 215
Query: 169 ITGLKTNDKTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKD 228
I + + L G +R P P I +C D
Sbjct: 216 IGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNCPPSFF------------PITVRCCDLD 263
Query: 229 PQKR 232
P+KR
Sbjct: 264 PEKR 267
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 81/153 (52%), Gaps = 2/153 (1%)
Query: 18 FKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMK 77
F E QV+ K RHE +V L S+ +V EY+ GSL L T L + +
Sbjct: 309 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD 367
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
+A A G+ Y+ N +HRD+ NILV + + DFGLA+ ED++Y+ G
Sbjct: 368 MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKF 426
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+ + APE G+ + K+DV+SFG++L +L T
Sbjct: 427 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 459
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 92/169 (54%), Gaps = 2/169 (1%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+AVK K+ + + + EF E V+ + +H N+V LLG C+ ++ E++ G+L +
Sbjct: 46 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 104
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L + R ++ + +A + ++YL + N IHRD+ N LV + + DFGL++
Sbjct: 105 LRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR 164
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
D+ Y+ G + + APE + K S K+DV++FGV+L ++ T
Sbjct: 165 LMTGDT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 96/174 (55%), Gaps = 5/174 (2%)
Query: 1 MIAVKQHKDASSQGDR-EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLD 59
+A+K K ++ R +F SE ++ + H NV+ L G + +++ E++ NGSLD
Sbjct: 63 FVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLD 122
Query: 60 QHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGL 119
L + + + + + G A G++YL + N +HRD+ NILV + + DFGL
Sbjct: 123 SFL-RQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGL 181
Query: 120 AKTQREDSDYSTETGVVG---TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
++ +D+ T T +G + + APE ++ K ++ +DV+S+G+V+ ++++
Sbjct: 182 SRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 235
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 92/169 (54%), Gaps = 2/169 (1%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+AVK K+ + + + EF E V+ + +H N+V LLG C+ ++ E++ G+L +
Sbjct: 41 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 99
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L + R ++ + +A + ++YL + N IHRD+ N LV + + DFGL++
Sbjct: 100 LRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR 159
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
D+ Y+ G + + APE + K S K+DV++FGV+L ++ T
Sbjct: 160 LMTGDT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 119/254 (46%), Gaps = 24/254 (9%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+A+K K + + F E QV+ K RHE +V L S+ +V EY+ GSL
Sbjct: 34 VAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDF 91
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L L + + +A A G+ Y+ N +HRD+ NILV + + DFGLA+
Sbjct: 92 LKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR 151
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTNDKTLGE 181
ED++Y+ G + + APE G+ + K+DV+SFG++L +L T +
Sbjct: 152 LI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL-----TTKGRVPY 205
Query: 182 KGLVGWARPLLK--ERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQKRLPMDTVV 239
G+V R +L ER Y P + +H L M Q C KDP++R
Sbjct: 206 PGMVN--REVLDQVERGYRMPCPPECPE--SLHDL--MCQ----CWRKDPEER----PTF 251
Query: 240 DALKSIMEGTATSN 253
+ L++ +E TS
Sbjct: 252 EYLQAFLEDYFTST 265
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 92/169 (54%), Gaps = 2/169 (1%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+AVK K+ + + + EF E V+ + +H N+V LLG C+ ++ E++ G+L +
Sbjct: 45 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 103
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L + R ++ + +A + ++YL + N IHRD+ N LV + + DFGL++
Sbjct: 104 LRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR 163
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
D+ Y+ G + + APE + K S K+DV++FGV+L ++ T
Sbjct: 164 LMTGDT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 211
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 88/169 (52%), Gaps = 3/169 (1%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+A+K K + + F E QV+ K RHE +V L S+ +V EY+ GSL
Sbjct: 211 VAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVGEYMSKGSLLDF 268
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L T L + + +A A G+ Y+ N +HRD+ NILV + + DFGLA+
Sbjct: 269 LKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR 328
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
ED++Y+ G + + APE G+ + K+DV+SFG++L +L T
Sbjct: 329 LI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 376
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 92/169 (54%), Gaps = 2/169 (1%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+AVK K+ + + + EF E V+ + +H N+V LLG C+ ++ E++ G+L +
Sbjct: 41 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 99
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L + R ++ + +A + ++YL + N IHRD+ N LV + + DFGL++
Sbjct: 100 LRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR 159
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
D+ Y+ G + + APE + K S K+DV++FGV+L ++ T
Sbjct: 160 LMTGDT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 119/254 (46%), Gaps = 24/254 (9%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+A+K K + + F E QV+ K RHE +V L S+ +V EY+ GSL
Sbjct: 36 VAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDF 93
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L L + + +A A G+ Y+ N +HRD+ NILV + + DFGLA+
Sbjct: 94 LKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR 153
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTNDKTLGE 181
ED++Y+ G + + APE G+ + K+DV+SFG++L +L T +
Sbjct: 154 LI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL-----TTKGRVPY 207
Query: 182 KGLVGWARPLLK--ERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQKRLPMDTVV 239
G+V R +L ER Y P + +H L M Q C KDP++R
Sbjct: 208 PGMVN--REVLDQVERGYRMPCPPECPE--SLHDL--MCQ----CWRKDPEER----PTF 253
Query: 240 DALKSIMEGTATSN 253
+ L++ +E TS
Sbjct: 254 EYLQAFLEDYFTST 267
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 119/254 (46%), Gaps = 24/254 (9%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+A+K K + + F E QV+ K RHE +V L S+ +V EY+ GSL
Sbjct: 45 VAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVIEYMSKGSLLDF 102
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L L + + +A A G+ Y+ N +HRD+ NILV + + DFGLA+
Sbjct: 103 LKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR 162
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTNDKTLGE 181
ED++Y+ G + + APE G+ + K+DV+SFG++L +L T +
Sbjct: 163 L-IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL-----TTKGRVPY 216
Query: 182 KGLVGWARPLLK--ERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQKRLPMDTVV 239
G+V R +L ER Y P + +H L M Q C KDP++R
Sbjct: 217 PGMVN--REVLDQVERGYRMPCPPECPE--SLHDL--MCQ----CWRKDPEER----PTF 262
Query: 240 DALKSIMEGTATSN 253
+ L++ +E TS
Sbjct: 263 EYLQAFLEDYFTST 276
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 92/169 (54%), Gaps = 2/169 (1%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+AVK K+ + + + EF E V+ + +H N+V LLG C+ ++ E++ G+L +
Sbjct: 39 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 97
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L + R +S + +A + ++YL + N IHRD+ N LV + + DFGL++
Sbjct: 98 LRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR 157
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
D+ ++ G + + APE + K S K+DV++FGV+L ++ T
Sbjct: 158 LMTGDT-FTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 88/169 (52%), Gaps = 3/169 (1%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+A+K K + + F E QV+ K RHE +V L S+ +V EY+ GSL
Sbjct: 42 VAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMNKGSLLDF 99
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L T L + + ++ A G+ Y+ N +HRD+ NILV + + DFGLA+
Sbjct: 100 LKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR 159
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
ED++Y+ G + + APE G+ + K+DV+SFG++L +L T
Sbjct: 160 L-IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 207
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 119/254 (46%), Gaps = 24/254 (9%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+A+K K + + F E QV+ K RHE +V L S+ +V EY+ GSL
Sbjct: 45 VAIKTLKPGTMSPE-AFLQEAQVMKKIRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDF 102
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L L + + +A A G+ Y+ N +HRD+ NILV + + DFGLA+
Sbjct: 103 LKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR 162
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTNDKTLGE 181
ED++Y+ G + + APE G+ + K+DV+SFG++L +L T +
Sbjct: 163 LI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL-----TTKGRVPY 216
Query: 182 KGLVGWARPLLK--ERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQKRLPMDTVV 239
G+V R +L ER Y P + +H L M Q C KDP++R
Sbjct: 217 PGMVN--REVLDQVERGYRMPCPPECPE--SLHDL--MCQ----CWRKDPEER----PTF 262
Query: 240 DALKSIMEGTATSN 253
+ L++ +E TS
Sbjct: 263 EYLQAFLEDYFTST 276
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 92/169 (54%), Gaps = 2/169 (1%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+AVK K+ + + + EF E V+ + +H N+V LLG C+ ++ E++ G+L +
Sbjct: 43 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 101
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L + R ++ + +A + ++YL + N IHRD+ N LV + + DFGL++
Sbjct: 102 LRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR 161
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
D+ Y+ G + + APE + K S K+DV++FGV+L ++ T
Sbjct: 162 LMTGDT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 125/266 (46%), Gaps = 36/266 (13%)
Query: 2 IAVKQHKDASSQGDR-EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K K ++ R EF SE ++ + H N++ L G ++ +++ E++ NG+LD
Sbjct: 47 VAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDS 106
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLA 120
L + + + + + G A G++YL E + +HRD+ NILV + + DFGL+
Sbjct: 107 FL-RLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLS 165
Query: 121 KTQREDSDYSTETGVVG---TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTNDK 177
+ E+S TET +G + + APE + K ++ +D +S+G+V+ +++
Sbjct: 166 RFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVM-------- 217
Query: 178 TLGEKGLVGWARPLLKERNYPDLID--------PRIIDC-YDVHQLFWMVQIAKKCLSKD 228
+ GE RP N D+I+ P DC +HQL C KD
Sbjct: 218 SFGE-------RPYWDMSNQ-DVINAIEQDYRLPPPPDCPTSLHQLML------DCWQKD 263
Query: 229 PQKRLPMDTVVDALKSIMEGTATSNI 254
R VV AL ++ A+ I
Sbjct: 264 RNARPRFPQVVSALDKMIRNPASLKI 289
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 119/254 (46%), Gaps = 24/254 (9%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+A+K K + + F E QV+ K RHE +V L S+ +V EY+ GSL
Sbjct: 45 VAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDF 102
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L L + + +A A G+ Y+ N +HRD+ NILV + + DFGLA+
Sbjct: 103 LKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR 162
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTNDKTLGE 181
ED++Y+ G + + APE G+ + K+DV+SFG++L +L T +
Sbjct: 163 LI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL-----TTKGRVPY 216
Query: 182 KGLVGWARPLLK--ERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQKRLPMDTVV 239
G+V R +L ER Y P + +H L M Q C KDP++R
Sbjct: 217 PGMVN--REVLDQVERGYRMPCPPECPE--SLHDL--MCQ----CWRKDPEER----PTF 262
Query: 240 DALKSIMEGTATSN 253
+ L++ +E TS
Sbjct: 263 EYLQAFLEDYFTST 276
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 92/169 (54%), Gaps = 2/169 (1%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+AVK K+ + + + EF E V+ + +H N+V LLG C+ ++ E++ G+L +
Sbjct: 46 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 104
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L + R ++ + +A + ++YL + N IHRD+ N LV + + DFGL++
Sbjct: 105 LRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR 164
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
D+ Y+ G + + APE + K S K+DV++FGV+L ++ T
Sbjct: 165 LMTGDT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 92/169 (54%), Gaps = 2/169 (1%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+AVK K+ + + + EF E V+ + +H N+V LLG C+ ++ E++ G+L +
Sbjct: 43 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 101
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L + R ++ + +A + ++YL + N IHRD+ N LV + + DFGL++
Sbjct: 102 LRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR 161
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
D+ Y+ G + + APE + K S K+DV++FGV+L ++ T
Sbjct: 162 LMTGDT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 119/254 (46%), Gaps = 24/254 (9%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+A+K K + + F E QV+ K RHE +V L S+ +V EY+ GSL
Sbjct: 45 VAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVCEYMSKGSLLDF 102
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L L + + +A A G+ Y+ N +HRD+ NILV + + DFGLA+
Sbjct: 103 LKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR 162
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTNDKTLGE 181
ED++Y+ G + + APE G+ + K+DV+SFG++L +L T +
Sbjct: 163 L-IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL-----TTKGRVPY 216
Query: 182 KGLVGWARPLLK--ERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQKRLPMDTVV 239
G+V R +L ER Y P + +H L M Q C KDP++R
Sbjct: 217 PGMVN--REVLDQVERGYRMPCPPECPE--SLHDL--MCQ----CWRKDPEER----PTF 262
Query: 240 DALKSIMEGTATSN 253
+ L++ +E TS
Sbjct: 263 EYLQAFLEDYFTST 276
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 119/274 (43%), Gaps = 31/274 (11%)
Query: 1 MIAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRL---LVYEYVCNGS 57
++AVKQ + + R+F+ E+Q+L KA H + ++ S G R LV EY+ +G
Sbjct: 54 LVAVKQLQHSGPDQQRDFQREIQIL-KALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGC 112
Query: 58 LDQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDF 117
L L +H R L + + + KG++YL +HRD+ NILV + + DF
Sbjct: 113 LRDFLQRH-RARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADF 171
Query: 118 GLAKTQREDSDYST--ETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTN 175
GLAK D DY E G Y APE + S ++DV+SFGVVL +L T +
Sbjct: 172 GLAKLLPLDKDYYVVREPGQSPIFWY-APESLSDNIFSRQSDVWSFGVVLYELFTYCDKS 230
Query: 176 DKTLGEKGLVGWARPLLKERNYPDLID-----------PRIIDC-YDVHQLFWMVQIAKK 223
E + R + ER+ P L P C +VH+L K
Sbjct: 231 CSPSAE-----FLRMMGCERDVPALSRLLELLEEGQRLPAPPACPAEVHELM------KL 279
Query: 224 CLSKDPQKRLPMDTVVDALKSIMEGTATSNIRGF 257
C + PQ R + L + G+ F
Sbjct: 280 CWAPSPQDRPSFSALGPQLDMLWSGSRGCETHAF 313
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 92/169 (54%), Gaps = 2/169 (1%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+AVK K+ + + + EF E V+ + +H N+V LLG C+ ++ E++ G+L +
Sbjct: 54 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 112
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L + R ++ + +A + ++YL + N IHRD+ N LV + + DFGL++
Sbjct: 113 LRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR 172
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
D+ Y+ G + + APE + K S K+DV++FGV+L ++ T
Sbjct: 173 LMTGDT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 220
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 92/169 (54%), Gaps = 2/169 (1%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+AVK K+ + + + EF E V+ + +H N+V LLG C+ ++ E++ G+L +
Sbjct: 42 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 100
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L + R ++ + +A + ++YL + N IHRD+ N LV + + DFGL++
Sbjct: 101 LRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR 160
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
D+ Y+ G + + APE + K S K+DV++FGV+L ++ T
Sbjct: 161 LMTGDT-YTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 92/169 (54%), Gaps = 2/169 (1%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+AVK K+ + + + EF E V+ + +H N+V LLG C+ ++ E++ G+L +
Sbjct: 43 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 101
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L + R ++ + +A + ++YL + N IHRD+ N LV + + DFGL++
Sbjct: 102 LRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR 161
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
D+ Y+ G + + APE + K S K+DV++FGV+L ++ T
Sbjct: 162 LMTGDT-YTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 88/157 (56%), Gaps = 4/157 (2%)
Query: 16 REFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKR 75
R+F E ++ + H N++ L G + ++V EY+ NGSLD L KH + +
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQL 149
Query: 76 MKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSD--YSTET 133
+ + G A G++YL + +HRD+ NIL+ + + DFGLA+ +D + Y+T
Sbjct: 150 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRG 209
Query: 134 GVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
G + + + +PE + K ++ +DV+S+G+VL ++++
Sbjct: 210 GKI-PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 87/169 (51%), Gaps = 3/169 (1%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+A+K K + + F E QV+ K RHE +V L S+ +V EY+ GSL
Sbjct: 35 VAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSE-EPIXIVTEYMSKGSLLDF 92
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L T L + + +A A G+ Y+ N +HRD+ NILV + + DFGLA+
Sbjct: 93 LKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR 152
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
ED++ + G + + APE G+ + K+DV+SFG++L +L T
Sbjct: 153 LI-EDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 200
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 91/169 (53%), Gaps = 3/169 (1%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+A+K K+ S D +F E +V+ K H +V L G C + LV+E++ +G L +
Sbjct: 54 VAIKTIKEGSMSED-DFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY 112
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L + R + E + + L +G+ YL E +IHRD+ N LV + + DFG+ +
Sbjct: 113 L-RTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTR 171
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+D Y++ TG + + +PE + S+K+DV+SFGV++ ++ +
Sbjct: 172 FVLDD-QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 219
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 91/169 (53%), Gaps = 2/169 (1%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+AVK K+ + + + EF E V+ + +H N+V LLG C+ ++ E++ G+L +
Sbjct: 39 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDY 97
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L + R +S + +A + ++YL + N IHRD+ N LV + + DFGL++
Sbjct: 98 LRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR 157
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
D+ + G + + APE + K S K+DV++FGV+L ++ T
Sbjct: 158 LMTGDTX-TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 94/180 (52%), Gaps = 9/180 (5%)
Query: 1 MIAVKQHKDASSQGDRE-FKSEVQVLSKARHENVVMLLGSCSD-GNKRL-LVYEYVCNGS 57
M+AVK K+ R ++ E+++L HE++V G C D G K + LV EYV GS
Sbjct: 39 MVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGS 98
Query: 58 LDQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDF 117
L +L +H + + + A +G+ YLH + IHR + N+L+ +D +GDF
Sbjct: 99 LRDYLPRHC---VGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDF 155
Query: 118 GLAKTQREDSDYS--TETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTN 175
GLAK E +Y E G Y APE ++ K +DV+SFGV L +L+T +N
Sbjct: 156 GLAKAVPEGHEYYRVREDGDSPVFWY-APECLKECKFYYASDVWSFGVTLYELLTYCDSN 214
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 90/157 (57%), Gaps = 4/157 (2%)
Query: 16 REFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKR 75
R+F E ++ + H NVV L G + G ++V E++ NG+LD L KH + +
Sbjct: 89 RDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHD-GQFTVIQL 147
Query: 76 MKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSD--YSTET 133
+ + G A G++YL + +HRD+ NILV + + DFGL++ +D + Y+T
Sbjct: 148 VGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTG 207
Query: 134 GVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
G + + + APE ++ K ++ +DV+S+G+V+ ++++
Sbjct: 208 GKI-PVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 243
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 88/169 (52%), Gaps = 3/169 (1%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+A+K K + + F E QV+ K RHE +V L S+ +V EY+ GSL
Sbjct: 42 VAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMNKGSLLDF 99
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L T L + + ++ A G+ Y+ N +HRD+ NILV + + DFGLA+
Sbjct: 100 LKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR 159
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
ED++++ G + + APE G+ + K+DV+SFG++L +L T
Sbjct: 160 L-IEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 207
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 94/180 (52%), Gaps = 9/180 (5%)
Query: 1 MIAVKQHKDASSQGDRE-FKSEVQVLSKARHENVVMLLGSCSD-GNKRL-LVYEYVCNGS 57
M+AVK K+ R ++ E+++L HE++V G C D G K + LV EYV GS
Sbjct: 40 MVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGS 99
Query: 58 LDQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDF 117
L +L +H + + + A +G+ YLH + IHR + N+L+ +D +GDF
Sbjct: 100 LRDYLPRHC---VGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDF 156
Query: 118 GLAKTQREDSDYS--TETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTN 175
GLAK E +Y E G Y APE ++ K +DV+SFGV L +L+T +N
Sbjct: 157 GLAKAVPEGHEYYRVREDGDSPVFWY-APECLKECKFYYASDVWSFGVTLYELLTYCDSN 215
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 91/169 (53%), Gaps = 2/169 (1%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+AVK K+ + + + EF E V+ + +H N+V LLG C+ +V EY+ G+L +
Sbjct: 60 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDY 118
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L + R ++ + +A + ++YL + N IHRD+ N LV + + DFGL++
Sbjct: 119 LRECNREEVTAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSR 178
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
D+ Y+ G + + APE + S K+DV++FGV+L ++ T
Sbjct: 179 LMTGDT-YTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIAT 226
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 88/157 (56%), Gaps = 4/157 (2%)
Query: 16 REFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKR 75
R+F E ++ + H N++ L G + ++V EY+ NGSLD L KH + +
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQL 149
Query: 76 MKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSD--YSTET 133
+ + G A G++YL + +HRD+ NIL+ + + DFGL++ +D + Y+T
Sbjct: 150 VGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 134 GVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
G + + + +PE + K ++ +DV+S+G+VL ++++
Sbjct: 210 GKI-PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 118/254 (46%), Gaps = 24/254 (9%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+A+K K + + F E QV+ K RHE +V L S+ +V EY+ G L
Sbjct: 45 VAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVMEYMSKGCLLDF 102
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L L + + +A A G+ Y+ N +HRD+ NILV + + DFGLA+
Sbjct: 103 LKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR 162
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTNDKTLGE 181
ED++Y+ G + + APE G+ + K+DV+SFG++L +L T +
Sbjct: 163 L-IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL-----TTKGRVPY 216
Query: 182 KGLVGWARPLLK--ERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQKRLPMDTVV 239
G+V R +L ER Y P + +H L M Q C KDP++R
Sbjct: 217 PGMVN--REVLDQVERGYRMPCPPECPE--SLHDL--MCQ----CWRKDPEER----PTF 262
Query: 240 DALKSIMEGTATSN 253
+ L++ +E TS
Sbjct: 263 EYLQAFLEDYFTST 276
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 92/169 (54%), Gaps = 2/169 (1%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+AVK K+ + + + EF E V+ + +H N+V LLG C+ ++ E++ G+L +
Sbjct: 248 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 306
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L + R +S + +A + ++YL + N IHR++ N LV + + DFGL++
Sbjct: 307 LRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSR 366
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
D+ Y+ G + + APE + K S K+DV++FGV+L ++ T
Sbjct: 367 LMTGDT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 414
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 95/172 (55%), Gaps = 5/172 (2%)
Query: 2 IAVKQHKDASSQGDR-EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K K ++ R +F E ++ + H N++ L G + ++V EY+ NGSLD
Sbjct: 64 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 123
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLA 120
L KH + + + + G A G++YL + +HRD+ NIL+ + + DFGL+
Sbjct: 124 FLRKHD-AQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 182
Query: 121 KTQREDSD--YSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+ +D + Y+T G + + + +PE + K ++ +DV+S+G+VL ++++
Sbjct: 183 RVLEDDPEAAYTTRGGKI-PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 91/169 (53%), Gaps = 2/169 (1%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+AVK K+ + + + EF E V+ + +H N+V LLG C+ ++ E++ G+L +
Sbjct: 39 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 97
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L + R +S + +A + ++YL + N IHRD+ N LV + + DFGL++
Sbjct: 98 LRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR 157
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
D+ + G + + APE + K S K+DV++FGV+L ++ T
Sbjct: 158 LMTGDTX-TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 118/254 (46%), Gaps = 24/254 (9%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+A+K K + + F E QV+ K RHE +V L S+ +V EY+ G L
Sbjct: 45 VAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGCLLDF 102
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L L + + +A A G+ Y+ N +HRD+ NILV + + DFGLA+
Sbjct: 103 LKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR 162
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTNDKTLGE 181
ED++Y+ G + + APE G+ + K+DV+SFG++L +L T +
Sbjct: 163 L-IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL-----TTKGRVPY 216
Query: 182 KGLVGWARPLLK--ERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQKRLPMDTVV 239
G+V R +L ER Y P + +H L M Q C KDP++R
Sbjct: 217 PGMVN--REVLDQVERGYRMPCPPECPE--SLHDL--MCQ----CWRKDPEER----PTF 262
Query: 240 DALKSIMEGTATSN 253
+ L++ +E TS
Sbjct: 263 EYLQAFLEDYFTST 276
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 88/157 (56%), Gaps = 4/157 (2%)
Query: 16 REFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKR 75
R+F E ++ + H N++ L G + ++V EY+ NGSLD L KH + +
Sbjct: 62 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQL 120
Query: 76 MKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSD--YSTET 133
+ + G A G++YL + +HRD+ NIL+ + + DFGL++ +D + Y+T
Sbjct: 121 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 180
Query: 134 GVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
G + + + +PE + K ++ +DV+S+G+VL ++++
Sbjct: 181 GKI-PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 88/157 (56%), Gaps = 4/157 (2%)
Query: 16 REFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKR 75
R+F E ++ + H N++ L G + ++V EY+ NGSLD L KH + +
Sbjct: 89 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQL 147
Query: 76 MKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSD--YSTET 133
+ + G A G++YL + +HRD+ NIL+ + + DFGL++ +D + Y+T
Sbjct: 148 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 207
Query: 134 GVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
G + + + +PE + K ++ +DV+S+G+VL ++++
Sbjct: 208 GKI-PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 88/157 (56%), Gaps = 4/157 (2%)
Query: 16 REFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKR 75
R+F E ++ + H N++ L G + ++V EY+ NGSLD L KH + +
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQL 149
Query: 76 MKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSD--YSTET 133
+ + G A G++YL + +HRD+ NIL+ + + DFGL++ +D + Y+T
Sbjct: 150 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 134 GVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
G + + + +PE + K ++ +DV+S+G+VL ++++
Sbjct: 210 GKI-PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 88/157 (56%), Gaps = 4/157 (2%)
Query: 16 REFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKR 75
R+F E ++ + H N++ L G + ++V EY+ NGSLD L KH + +
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQL 149
Query: 76 MKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSD--YSTET 133
+ + G A G++YL + +HRD+ NIL+ + + DFGL++ +D + Y+T
Sbjct: 150 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 134 GVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
G + + + +PE + K ++ +DV+S+G+VL ++++
Sbjct: 210 GKI-PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 88/157 (56%), Gaps = 4/157 (2%)
Query: 16 REFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKR 75
R+F E ++ + H N++ L G + ++V EY+ NGSLD L KH + +
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQL 149
Query: 76 MKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSD--YSTET 133
+ + G A G++YL + +HRD+ NIL+ + + DFGL++ +D + Y+T
Sbjct: 150 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 134 GVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
G + + + +PE + K ++ +DV+S+G+VL ++++
Sbjct: 210 GKI-PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 92/169 (54%), Gaps = 3/169 (1%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+A+K ++ + + +F E +V+ K H +V L G C + LV+E++ +G L +
Sbjct: 34 VAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY 92
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L + R + E + + L +G+ YL E ++IHRD+ N LV + + DFG+ +
Sbjct: 93 L-RTQRGLFAAETLLGMCLDVCEGMAYLEEASVIHRDLAARNCLVGENQVIKVSDFGMTR 151
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+D Y++ TG + + +PE + S+K+DV+SFGV++ ++ +
Sbjct: 152 FVLDD-QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 199
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 88/157 (56%), Gaps = 4/157 (2%)
Query: 16 REFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKR 75
R+F E ++ + H N++ L G + ++V EY+ NGSLD L KH + +
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQL 149
Query: 76 MKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSD--YSTET 133
+ + G A G++YL + +HRD+ NIL+ + + DFGL++ +D + Y+T
Sbjct: 150 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 134 GVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
G + + + +PE + K ++ +DV+S+G+VL ++++
Sbjct: 210 GKI-PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 87/157 (55%), Gaps = 4/157 (2%)
Query: 16 REFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKR 75
R+F E ++ + H N++ L G + ++V EY+ NGSLD L KH + +
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQL 149
Query: 76 MKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSD--YSTET 133
+ + G A G++YL + +HRD+ NIL+ + + DFGL + +D + Y+T
Sbjct: 150 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRG 209
Query: 134 GVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
G + + + +PE + K ++ +DV+S+G+VL ++++
Sbjct: 210 GKI-PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 97/189 (51%), Gaps = 29/189 (15%)
Query: 3 AVKQHKDASSQGD-REFKSEVQVLSK-ARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
A+K+ K+ +S+ D R+F E++VL K H N++ LLG+C L EY +G+L
Sbjct: 46 AIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD 105
Query: 61 HLSKH--------------TRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILV 106
L K T + LS ++ + A A+G+ YL + IHRD+ NILV
Sbjct: 106 FLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV 165
Query: 107 THDFEPMLGDFGLAKTQREDSDYSTETGVVGTLG-----YLAPEYVECGKLSTKTDVYSF 161
++ + DFGL++ Q E V T+G ++A E + +T +DV+S+
Sbjct: 166 GENYVAKIADFGLSRGQ--------EVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSY 217
Query: 162 GVVLLQLIT 170
GV+L ++++
Sbjct: 218 GVLLWEIVS 226
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 97/189 (51%), Gaps = 29/189 (15%)
Query: 3 AVKQHKDASSQGD-REFKSEVQVLSK-ARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
A+K+ K+ +S+ D R+F E++VL K H N++ LLG+C L EY +G+L
Sbjct: 56 AIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD 115
Query: 61 HLSKH--------------TRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILV 106
L K T + LS ++ + A A+G+ YL + IHRD+ NILV
Sbjct: 116 FLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV 175
Query: 107 THDFEPMLGDFGLAKTQREDSDYSTETGVVGTLG-----YLAPEYVECGKLSTKTDVYSF 161
++ + DFGL++ Q E V T+G ++A E + +T +DV+S+
Sbjct: 176 GENYVAKIADFGLSRGQ--------EVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSY 227
Query: 162 GVVLLQLIT 170
GV+L ++++
Sbjct: 228 GVLLWEIVS 236
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 89/175 (50%), Gaps = 8/175 (4%)
Query: 1 MIAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKR---LLVYEYVCNGS 57
++AVKQ + + R+F+ E+Q+L KA H + ++ S G R LV EY+ +G
Sbjct: 38 LVAVKQLQHSGPDQQRDFQREIQIL-KALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGC 96
Query: 58 LDQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDF 117
L L +H R L + + + KG++YL +HRD+ NILV + + DF
Sbjct: 97 LRDFLQRH-RARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADF 155
Query: 118 GLAKTQREDSDYST--ETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
GLAK D D E G Y APE + S ++DV+SFGVVL +L T
Sbjct: 156 GLAKLLPLDKDXXVVREPGQSPIFWY-APESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 95/174 (54%), Gaps = 5/174 (2%)
Query: 1 MIAVKQHKDASSQGDR-EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLD 59
+A+K K ++ R +F SE ++ + H NV+ L G + +++ E++ NGSLD
Sbjct: 37 FVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLD 96
Query: 60 QHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGL 119
L + + + + + G A G++YL + N +HR + NILV + + DFGL
Sbjct: 97 SFL-RQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGL 155
Query: 120 AKTQREDSDYSTETGVVGT---LGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
++ +D+ T T +G + + APE ++ K ++ +DV+S+G+V+ ++++
Sbjct: 156 SRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 209
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 124/266 (46%), Gaps = 36/266 (13%)
Query: 2 IAVKQHKDASSQGDR-EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K K ++ R EF SE ++ + H N++ L G ++ +++ E++ NG+LD
Sbjct: 45 VAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDS 104
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLA 120
L + + + + + G A G++YL E + +HRD+ NILV + + DFGL+
Sbjct: 105 FL-RLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLS 163
Query: 121 KTQREDSDYSTETGVVG---TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTNDK 177
+ E+S T T +G + + APE + K ++ +D +S+G+V+ +++
Sbjct: 164 RFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVM-------- 215
Query: 178 TLGEKGLVGWARPLLKERNYPDLID--------PRIIDC-YDVHQLFWMVQIAKKCLSKD 228
+ GE RP N D+I+ P DC +HQL C KD
Sbjct: 216 SFGE-------RPYWDMSNQ-DVINAIEQDYRLPPPPDCPTSLHQLM------LDCWQKD 261
Query: 229 PQKRLPMDTVVDALKSIMEGTATSNI 254
R VV AL ++ A+ I
Sbjct: 262 RNARPRFPQVVSALDKMIRNPASLKI 287
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 91/169 (53%), Gaps = 2/169 (1%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+AVK K+ + + + EF E V+ + +H N+V LLG C+ ++ E++ G+L +
Sbjct: 42 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDY 100
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L + R ++ + +A + ++YL + N IHRD+ N LV + + DFGL++
Sbjct: 101 LRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR 160
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
D+ + G + + APE + K S K+DV++FGV+L ++ T
Sbjct: 161 LMTGDTX-TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 91/169 (53%), Gaps = 2/169 (1%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+AVK K+ + + + EF E V+ + +H N+V LLG C+ ++ E++ G+L +
Sbjct: 46 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 104
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L + R ++ + +A + ++YL + N IHRD+ N LV + + DFGL++
Sbjct: 105 LRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR 164
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
D+ + G + + APE + K S K+DV++FGV+L ++ T
Sbjct: 165 LMTGDTX-TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 111/246 (45%), Gaps = 39/246 (15%)
Query: 18 FKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMK 77
F E QV+ K RHE +V L S+ +V EY+ GSL L L + +
Sbjct: 227 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD 285
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
+A A G+ Y+ N +HRD+ NILV + + DFGL + ED++Y+ G
Sbjct: 286 MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLGRLI-EDNEYTARQGAKF 344
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTNDKTLGEKGLVGWARPLLKERNY 197
+ + APE G+ + K+DV+SFG++L +L T KG V Y
Sbjct: 345 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTT-----------KGRV----------PY 383
Query: 198 PDLIDPRIIDCYDVHQLFWMV----------QIAKKCLSKDPQKRLPMDTVVDALKSIME 247
P +++ ++D V + + M + +C KDP++R + L++ +E
Sbjct: 384 PGMVNREVLD--QVERGYRMPCPPECPESLHDLMCQCWRKDPEER----PTFEYLQAFLE 437
Query: 248 GTATSN 253
TS
Sbjct: 438 DYFTST 443
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 85/169 (50%), Gaps = 3/169 (1%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+AVK K+ S D EF E Q + K H +V G CS +V EY+ NG L +
Sbjct: 35 VAVKMIKEGSMSED-EFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNY 93
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L H + L + +++ +G+ +L + IHRD+ N LV D + DFG+ +
Sbjct: 94 LRSHGKG-LEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTR 152
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+D Y + G + + APE K S+K+DV++FG+++ ++ +
Sbjct: 153 YVLDD-QYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFS 200
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 86/169 (50%), Gaps = 3/169 (1%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+A+K K + + F E QV+ K RHE +V L S+ +V EY+ GSL
Sbjct: 45 VAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVIEYMSKGSLLDF 102
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L L + + +A A G+ Y+ N +HRD+ NILV + + DFGLA+
Sbjct: 103 LKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR 162
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
ED++ + G + + APE G+ + K+DV+SFG++L +L T
Sbjct: 163 L-IEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 92/169 (54%), Gaps = 2/169 (1%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+AVK K+ + + + EF E V+ + +H N+V LLG C+ ++ E++ G+L +
Sbjct: 287 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 345
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L + R ++ + +A + ++YL + N IHR++ N LV + + DFGL++
Sbjct: 346 LRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSR 405
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
D+ Y+ G + + APE + K S K+DV++FGV+L ++ T
Sbjct: 406 LMTGDT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 453
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 92/169 (54%), Gaps = 2/169 (1%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+AVK K+ + + + EF E V+ + +H N+V LLG C+ ++ E++ G+L +
Sbjct: 245 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 303
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L + R ++ + +A + ++YL + N IHR++ N LV + + DFGL++
Sbjct: 304 LRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSR 363
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
D+ Y+ G + + APE + K S K+DV++FGV+L ++ T
Sbjct: 364 LMTGDT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 411
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 91/169 (53%), Gaps = 3/169 (1%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+A+K ++ + + +F E +V+ K H +V L G C + LV+E++ +G L +
Sbjct: 34 VAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY 92
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L + R + E + + L +G+ YL E +IHRD+ N LV + + DFG+ +
Sbjct: 93 L-RTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTR 151
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+D Y++ TG + + +PE + S+K+DV+SFGV++ ++ +
Sbjct: 152 FVLDD-QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 199
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 91/169 (53%), Gaps = 3/169 (1%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+A+K ++ + + +F E +V+ K H +V L G C + LV+E++ +G L +
Sbjct: 32 VAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY 90
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L + R + E + + L +G+ YL E +IHRD+ N LV + + DFG+ +
Sbjct: 91 L-RTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTR 149
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+D Y++ TG + + +PE + S+K+DV+SFGV++ ++ +
Sbjct: 150 FVLDD-QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 197
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 91/169 (53%), Gaps = 3/169 (1%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+A+K ++ + + +F E +V+ K H +V L G C + LV+E++ +G L +
Sbjct: 37 VAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY 95
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L + R + E + + L +G+ YL E +IHRD+ N LV + + DFG+ +
Sbjct: 96 L-RTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTR 154
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+D Y++ TG + + +PE + S+K+DV+SFGV++ ++ +
Sbjct: 155 FVLDD-QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 202
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 97/189 (51%), Gaps = 29/189 (15%)
Query: 3 AVKQHKDASSQGD-REFKSEVQVLSK-ARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
A+K+ K+ +S+ D R+F E++VL K H N++ LLG+C L EY +G+L
Sbjct: 53 AIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD 112
Query: 61 HLSKH--------------TRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILV 106
L K T + LS ++ + A A+G+ YL + IHR++ NILV
Sbjct: 113 FLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILV 172
Query: 107 THDFEPMLGDFGLAKTQREDSDYSTETGVVGTLG-----YLAPEYVECGKLSTKTDVYSF 161
++ + DFGL++ Q E V T+G ++A E + +T +DV+S+
Sbjct: 173 GENYVAKIADFGLSRGQ--------EVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSY 224
Query: 162 GVVLLQLIT 170
GV+L ++++
Sbjct: 225 GVLLWEIVS 233
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 93/173 (53%), Gaps = 7/173 (4%)
Query: 3 AVKQHKDASSQGD-REFKSEVQVLSKARHENVVMLLGSC--SDGNKRLLVYEYVCNGSLD 59
AVK + G+ +F +E ++ H NV+ LLG C S+G+ L+V Y+ +G L
Sbjct: 81 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDLR 139
Query: 60 QHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGL 119
+ T P + + + L AKG++YL +HRD+ N ++ F + DFGL
Sbjct: 140 NFIRNETHNP-TVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGL 198
Query: 120 AKTQREDSDYST--ETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
A+ + YS +TG + ++A E ++ K +TK+DV+SFGV+L +L+T
Sbjct: 199 ARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 251
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 93/173 (53%), Gaps = 7/173 (4%)
Query: 3 AVKQHKDASSQGD-REFKSEVQVLSKARHENVVMLLGSC--SDGNKRLLVYEYVCNGSLD 59
AVK + G+ +F +E ++ H NV+ LLG C S+G+ L+V Y+ +G L
Sbjct: 80 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDLR 138
Query: 60 QHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGL 119
+ T P + + + L AKG++YL +HRD+ N ++ F + DFGL
Sbjct: 139 NFIRNETHNP-TVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGL 197
Query: 120 AKTQREDSDYST--ETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
A+ + YS +TG + ++A E ++ K +TK+DV+SFGV+L +L+T
Sbjct: 198 ARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 250
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 93/173 (53%), Gaps = 7/173 (4%)
Query: 3 AVKQHKDASSQGD-REFKSEVQVLSKARHENVVMLLGSC--SDGNKRLLVYEYVCNGSLD 59
AVK + G+ +F +E ++ H NV+ LLG C S+G+ L+V Y+ +G L
Sbjct: 54 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDLR 112
Query: 60 QHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGL 119
+ T P + + + L AKG++YL +HRD+ N ++ F + DFGL
Sbjct: 113 NFIRNETHNP-TVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGL 171
Query: 120 AKTQREDSDYST--ETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
A+ + YS +TG + ++A E ++ K +TK+DV+SFGV+L +L+T
Sbjct: 172 ARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 224
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 120/257 (46%), Gaps = 32/257 (12%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+A+K K + + F E Q++ K +H+ +V L S+ +V EY+ GSL
Sbjct: 36 VAIKTLKPGTMSPE-SFLEEAQIMKKLKHDKLVQLYAVVSE-EPIYIVTEYMNKGSLLDF 93
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L L + +A A G+ Y+ N IHRD+ NILV + + DFGLA+
Sbjct: 94 LKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLAR 153
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKT-----ND 176
ED++ + G + + APE G+ + K+DV+SFG++L +L+T + N+
Sbjct: 154 LI-EDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN 212
Query: 177 KTLGEKGLVGWARPLLKERNYPDLIDPRIIDC-YDVHQLFWMVQIAKKCLSKDPQKRLPM 235
+ + E+ G+ P + DC +H+L M+ C KDP++R
Sbjct: 213 REVLEQVERGYRMPCPQ-------------DCPISLHEL--MIH----CWKKDPEER--- 250
Query: 236 DTVVDALKSIMEGTATS 252
+ L+S +E T+
Sbjct: 251 -PTFEYLQSFLEDYFTA 266
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 93/173 (53%), Gaps = 7/173 (4%)
Query: 3 AVKQHKDASSQGD-REFKSEVQVLSKARHENVVMLLGSC--SDGNKRLLVYEYVCNGSLD 59
AVK + G+ +F +E ++ H NV+ LLG C S+G+ L+V Y+ +G L
Sbjct: 59 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDLR 117
Query: 60 QHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGL 119
+ T P + + + L AKG++YL +HRD+ N ++ F + DFGL
Sbjct: 118 NFIRNETHNP-TVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGL 176
Query: 120 AKTQREDSDYST--ETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
A+ + YS +TG + ++A E ++ K +TK+DV+SFGV+L +L+T
Sbjct: 177 ARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 229
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 93/173 (53%), Gaps = 7/173 (4%)
Query: 3 AVKQHKDASSQGD-REFKSEVQVLSKARHENVVMLLGSC--SDGNKRLLVYEYVCNGSLD 59
AVK + G+ +F +E ++ H NV+ LLG C S+G+ L+V Y+ +G L
Sbjct: 62 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDLR 120
Query: 60 QHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGL 119
+ T P + + + L AKG++YL +HRD+ N ++ F + DFGL
Sbjct: 121 NFIRNETHNP-TVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGL 179
Query: 120 AKTQREDSDYST--ETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
A+ + YS +TG + ++A E ++ K +TK+DV+SFGV+L +L+T
Sbjct: 180 ARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 88/169 (52%), Gaps = 3/169 (1%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+AVK K S + F +E V+ +H+ +V L + ++ E++ GSL
Sbjct: 42 VAVKTMKPGSMSVE-AFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDF 99
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L + K + + A+G+ ++ + N IHRD+ NILV+ + DFGLA+
Sbjct: 100 LKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLAR 159
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
ED++Y+ G + + APE + G + K+DV+SFG++L++++T
Sbjct: 160 VI-EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 207
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 93/173 (53%), Gaps = 7/173 (4%)
Query: 3 AVKQHKDASSQGD-REFKSEVQVLSKARHENVVMLLGSC--SDGNKRLLVYEYVCNGSLD 59
AVK + G+ +F +E ++ H NV+ LLG C S+G+ L+V Y+ +G L
Sbjct: 62 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDLR 120
Query: 60 QHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGL 119
+ T P + + + L AKG++YL +HRD+ N ++ F + DFGL
Sbjct: 121 NFIRNETHNP-TVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGL 179
Query: 120 AKTQREDSDYST--ETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
A+ + YS +TG + ++A E ++ K +TK+DV+SFGV+L +L+T
Sbjct: 180 ARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 93/173 (53%), Gaps = 7/173 (4%)
Query: 3 AVKQHKDASSQGD-REFKSEVQVLSKARHENVVMLLGSC--SDGNKRLLVYEYVCNGSLD 59
AVK + G+ +F +E ++ H NV+ LLG C S+G+ L+V Y+ +G L
Sbjct: 57 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDLR 115
Query: 60 QHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGL 119
+ T P + + + L AKG++YL +HRD+ N ++ F + DFGL
Sbjct: 116 NFIRNETHNP-TVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGL 174
Query: 120 AKTQREDSDYST--ETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
A+ + YS +TG + ++A E ++ K +TK+DV+SFGV+L +L+T
Sbjct: 175 ARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 227
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 93/173 (53%), Gaps = 7/173 (4%)
Query: 3 AVKQHKDASSQGD-REFKSEVQVLSKARHENVVMLLGSC--SDGNKRLLVYEYVCNGSLD 59
AVK + G+ +F +E ++ H NV+ LLG C S+G+ L+V Y+ +G L
Sbjct: 61 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDLR 119
Query: 60 QHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGL 119
+ T P + + + L AKG++YL +HRD+ N ++ F + DFGL
Sbjct: 120 NFIRNETHNP-TVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGL 178
Query: 120 AKTQREDSDYST--ETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
A+ + YS +TG + ++A E ++ K +TK+DV+SFGV+L +L+T
Sbjct: 179 ARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 93/173 (53%), Gaps = 7/173 (4%)
Query: 3 AVKQHKDASSQGD-REFKSEVQVLSKARHENVVMLLGSC--SDGNKRLLVYEYVCNGSLD 59
AVK + G+ +F +E ++ H NV+ LLG C S+G+ L+V Y+ +G L
Sbjct: 60 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDLR 118
Query: 60 QHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGL 119
+ T P + + + L AKG++YL +HRD+ N ++ F + DFGL
Sbjct: 119 NFIRNETHNP-TVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGL 177
Query: 120 AKTQREDSDYST--ETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
A+ + YS +TG + ++A E ++ K +TK+DV+SFGV+L +L+T
Sbjct: 178 ARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 123/260 (47%), Gaps = 34/260 (13%)
Query: 2 IAVKQHKDASSQGDR-EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K K ++ R +F E ++ + H N++ L G + ++V EY+ NGSLD
Sbjct: 53 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDT 112
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLA 120
L K+ + + + + G + G++YL + +HRD+ NIL+ + + DFGL+
Sbjct: 113 FLKKNDGQ-FTVIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 171
Query: 121 KTQREDSD--YSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTNDKT 178
+ +D + Y+T G + + + APE + K ++ +DV+S+G+V+ +++ +
Sbjct: 172 RVLEDDPEAAYTTRGGKI-PIRWTAPEAIAFRKFTSASDVWSYGIVMWEVV--------S 222
Query: 179 LGEKGLVGWARPLLKERNYPDLID--------PRIIDCYDVHQLFWMVQIAKKCLSKDPQ 230
GE RP + N D+I P +DC + Q+ C K+
Sbjct: 223 YGE-------RPYWEMTN-QDVIKAVEEGYRLPSPMDCPAA-----LYQLMLDCWQKERN 269
Query: 231 KRLPMDTVVDALKSIMEGTA 250
R D +V+ L ++ A
Sbjct: 270 SRPKFDEIVNMLDKLIRNPA 289
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 83/156 (53%), Gaps = 3/156 (1%)
Query: 16 REFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKR 75
+ F+ EV S+ H+N+V ++ + + LV EY+ +L +++ H PLS +
Sbjct: 56 KRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHG--PLSVDTA 113
Query: 76 MKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGV 135
+ G+++ H+ I+HRD+ P NIL+ + + DFG+AK E S T V
Sbjct: 114 INFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQT-NHV 172
Query: 136 VGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
+GT+ Y +PE + TD+YS G+VL +++ G
Sbjct: 173 LGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVG 208
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 87/157 (55%), Gaps = 4/157 (2%)
Query: 16 REFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKR 75
R+F E ++ + H N++ L G + ++V E + NGSLD L KH + +
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHD-AQFTVIQL 149
Query: 76 MKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSD--YSTET 133
+ + G A G++YL + +HRD+ NIL+ + + DFGL++ +D + Y+T
Sbjct: 150 VGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 134 GVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
G + + + +PE + K ++ +DV+S+G+VL ++++
Sbjct: 210 GKI-PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 85/169 (50%), Gaps = 2/169 (1%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+AVK K + + F E ++ +H+ +V L + ++ EY+ GSL
Sbjct: 40 VAVKTLK-PGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDF 98
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L + K + + A+G+ Y+ N IHRD+ N+LV+ + DFGLA+
Sbjct: 99 LKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLAR 158
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
ED++Y+ G + + APE + G + K+DV+SFG++L +++T
Sbjct: 159 VI-EDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVT 206
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 87/157 (55%), Gaps = 4/157 (2%)
Query: 16 REFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKR 75
R+F E ++ + H N++ L G + ++V E + NGSLD L KH + +
Sbjct: 62 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHD-AQFTVIQL 120
Query: 76 MKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSD--YSTET 133
+ + G A G++YL + +HRD+ NIL+ + + DFGL++ +D + Y+T
Sbjct: 121 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 180
Query: 134 GVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
G + + + +PE + K ++ +DV+S+G+VL ++++
Sbjct: 181 GKI-PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 87/157 (55%), Gaps = 4/157 (2%)
Query: 16 REFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKR 75
R+F E ++ + H N++ L G + ++V E + NGSLD L KH + +
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHD-AQFTVIQL 149
Query: 76 MKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSD--YSTET 133
+ + G A G++YL + +HRD+ NIL+ + + DFGL++ +D + Y+T
Sbjct: 150 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 134 GVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
G + + + +PE + K ++ +DV+S+G+VL ++++
Sbjct: 210 GKI-PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 90/169 (53%), Gaps = 3/169 (1%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+A+K ++ + + +F E +V+ K H +V L G C + LV E++ +G L +
Sbjct: 35 VAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDY 93
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L + R + E + + L +G+ YL E +IHRD+ N LV + + DFG+ +
Sbjct: 94 L-RTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTR 152
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+D Y++ TG + + +PE + S+K+DV+SFGV++ ++ +
Sbjct: 153 FVLDD-QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 200
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 84/159 (52%), Gaps = 7/159 (4%)
Query: 18 FKSEVQVLSKARHENVVMLLGS----CSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWE 73
F+ E Q + H +V + + G +V EYV +L + HT P++ +
Sbjct: 59 FRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIV--HTEGPMTPK 116
Query: 74 KRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTET 133
+ +++ A + L + H+N IIHRD+ P NI+++ + DFG+A+ + + T+T
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 134 -GVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
V+GT YL+PE + ++DVYS G VL +++TG
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 88/169 (52%), Gaps = 3/169 (1%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+AVK K S + F +E V+ +H+ +V L + ++ E++ GSL
Sbjct: 215 VAVKTMKPGSMSVE-AFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDF 272
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L + K + + A+G+ ++ + N IHRD+ NILV+ + DFGLA+
Sbjct: 273 LKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLAR 332
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
ED++Y+ G + + APE + G + K+DV+SFG++L++++T
Sbjct: 333 VI-EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 380
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 96/172 (55%), Gaps = 5/172 (2%)
Query: 2 IAVKQHKDA-SSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K K + + R+F SE ++ + H N++ L G + +++ EY+ NGSLD
Sbjct: 60 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 119
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLA 120
L K+ + + + + G G++YL + + +HRD+ NILV + + DFG++
Sbjct: 120 FLRKNDGR-FTVIQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMS 178
Query: 121 KTQREDSD--YSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+ +D + Y+T G + + + APE + K ++ +DV+S+G+V+ ++++
Sbjct: 179 RVLEDDPEAAYTTRGGKI-PIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 229
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 96/172 (55%), Gaps = 5/172 (2%)
Query: 2 IAVKQHKDA-SSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K K + + R+F SE ++ + H N++ L G + +++ EY+ NGSLD
Sbjct: 45 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 104
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLA 120
L K+ + + + + G G++YL + + +HRD+ NILV + + DFG++
Sbjct: 105 FLRKND-GRFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMS 163
Query: 121 KTQREDSD--YSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+ +D + Y+T G + + + APE + K ++ +DV+S+G+V+ ++++
Sbjct: 164 RVLEDDPEAAYTTRGGKI-PIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 214
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 96/172 (55%), Gaps = 5/172 (2%)
Query: 2 IAVKQHKDA-SSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K K + + R+F SE ++ + H N++ L G + +++ EY+ NGSLD
Sbjct: 39 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 98
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLA 120
L K+ + + + + G G++YL + + +HRD+ NILV + + DFG++
Sbjct: 99 FLRKNDGR-FTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMS 157
Query: 121 KTQREDSD--YSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+ +D + Y+T G + + + APE + K ++ +DV+S+G+V+ ++++
Sbjct: 158 RVLEDDPEAAYTTRGGKI-PIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 208
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 92/173 (53%), Gaps = 7/173 (4%)
Query: 3 AVKQHKDASSQGD-REFKSEVQVLSKARHENVVMLLGSC--SDGNKRLLVYEYVCNGSLD 59
AVK + G+ +F +E ++ H NV+ LLG C S+G+ L+V Y+ +G L
Sbjct: 61 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDLR 119
Query: 60 QHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGL 119
+ T P + + + L AKG++YL +HRD+ N ++ F + DFGL
Sbjct: 120 NFIRNETHNP-TVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGL 178
Query: 120 AKTQ--REDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
A+ +E +TG + ++A E ++ K +TK+DV+SFGV+L +L+T
Sbjct: 179 ARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 83/159 (52%), Gaps = 7/159 (4%)
Query: 18 FKSEVQVLSKARHENVVMLL----GSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWE 73
F+ E Q + H +V + G +V EYV +L + HT P++ +
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV--HTEGPMTPK 116
Query: 74 KRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTET 133
+ +++ A + L + H+N IIHRD+ P NI+++ + DFG+A+ + + T+T
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 134 -GVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
V+GT YL+PE + ++DVYS G VL +++TG
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 83/159 (52%), Gaps = 7/159 (4%)
Query: 18 FKSEVQVLSKARHENVVMLL----GSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWE 73
F+ E Q + H +V + G +V EYV +L + HT P++ +
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV--HTEGPMTPK 116
Query: 74 KRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTET 133
+ +++ A + L + H+N IIHRD+ P NI+++ + DFG+A+ + + T+T
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 134 -GVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
V+GT YL+PE + ++DVYS G VL +++TG
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 83/159 (52%), Gaps = 7/159 (4%)
Query: 18 FKSEVQVLSKARHENVVMLL----GSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWE 73
F+ E Q + H +V + G +V EYV +L + HT P++ +
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV--HTEGPMTPK 116
Query: 74 KRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTET 133
+ +++ A + L + H+N IIHRD+ P NI+++ + DFG+A+ + + T+T
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 134 -GVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
V+GT YL+PE + ++DVYS G VL +++TG
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 94/185 (50%), Gaps = 16/185 (8%)
Query: 2 IAVKQHK-DASSQGDREFKSEVQVLSK-ARHENVVMLLGSCSDGNKRLLVYEYVCNGSLD 59
+AVK K DA+ + + SE++++ +H+N++ LLG+C+ ++ EY G+L
Sbjct: 56 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 115
Query: 60 QHL--------------SKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNIL 105
++L S + LS + + A A+G++YL IHRD+ N+L
Sbjct: 116 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 175
Query: 106 VTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVL 165
VT D + DFGLA+ Y T + ++APE + + ++DV+SFGV+L
Sbjct: 176 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL 235
Query: 166 LQLIT 170
++ T
Sbjct: 236 WEIFT 240
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 94/185 (50%), Gaps = 16/185 (8%)
Query: 2 IAVKQHK-DASSQGDREFKSEVQVLSK-ARHENVVMLLGSCSDGNKRLLVYEYVCNGSLD 59
+AVK K DA+ + + SE++++ +H+N++ LLG+C+ ++ EY G+L
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 60 QHL--------------SKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNIL 105
++L S + LS + + A A+G++YL IHRD+ N+L
Sbjct: 123 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 182
Query: 106 VTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVL 165
VT D + DFGLA+ Y T + ++APE + + ++DV+SFGV+L
Sbjct: 183 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL 242
Query: 166 LQLIT 170
++ T
Sbjct: 243 WEIFT 247
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 94/185 (50%), Gaps = 16/185 (8%)
Query: 2 IAVKQHK-DASSQGDREFKSEVQVLSK-ARHENVVMLLGSCSDGNKRLLVYEYVCNGSLD 59
+AVK K DA+ + + SE++++ +H+N++ LLG+C+ ++ EY G+L
Sbjct: 48 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 107
Query: 60 QHL--------------SKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNIL 105
++L S + LS + + A A+G++YL IHRD+ N+L
Sbjct: 108 EYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 167
Query: 106 VTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVL 165
VT D + DFGLA+ Y T + ++APE + + ++DV+SFGV+L
Sbjct: 168 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL 227
Query: 166 LQLIT 170
++ T
Sbjct: 228 WEIFT 232
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 94/185 (50%), Gaps = 16/185 (8%)
Query: 2 IAVKQHK-DASSQGDREFKSEVQVLSK-ARHENVVMLLGSCSDGNKRLLVYEYVCNGSLD 59
+AVK K DA+ + + SE++++ +H+N++ LLG+C+ ++ EY G+L
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 60 QHL--------------SKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNIL 105
++L S + LS + + A A+G++YL IHRD+ N+L
Sbjct: 123 EYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 182
Query: 106 VTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVL 165
VT D + DFGLA+ Y T + ++APE + + ++DV+SFGV+L
Sbjct: 183 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL 242
Query: 166 LQLIT 170
++ T
Sbjct: 243 WEIFT 247
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 88/169 (52%), Gaps = 3/169 (1%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+A+K K+ S D EF E +V+ HE +V L G C+ ++ EY+ NG L +
Sbjct: 31 VAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 89
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L + R ++ +++ + ++YL +HRD+ N LV + DFGL++
Sbjct: 90 L-REMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSR 148
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+D +Y++ G + + PE + K S+K+D+++FGV++ ++ +
Sbjct: 149 YVLDD-EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 196
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 94/185 (50%), Gaps = 16/185 (8%)
Query: 2 IAVKQHK-DASSQGDREFKSEVQVLSK-ARHENVVMLLGSCSDGNKRLLVYEYVCNGSLD 59
+AVK K DA+ + + SE++++ +H+N++ LLG+C+ ++ EY G+L
Sbjct: 55 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 114
Query: 60 QHL--------------SKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNIL 105
++L S + LS + + A A+G++YL IHRD+ N+L
Sbjct: 115 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 174
Query: 106 VTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVL 165
VT D + DFGLA+ Y T + ++APE + + ++DV+SFGV+L
Sbjct: 175 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL 234
Query: 166 LQLIT 170
++ T
Sbjct: 235 WEIFT 239
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 94/185 (50%), Gaps = 16/185 (8%)
Query: 2 IAVKQHK-DASSQGDREFKSEVQVLSK-ARHENVVMLLGSCSDGNKRLLVYEYVCNGSLD 59
+AVK K DA+ + + SE++++ +H+N++ LLG+C+ ++ EY G+L
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 60 QHL--------------SKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNIL 105
++L S + LS + + A A+G++YL IHRD+ N+L
Sbjct: 123 EYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 182
Query: 106 VTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVL 165
VT D + DFGLA+ Y T + ++APE + + ++DV+SFGV+L
Sbjct: 183 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL 242
Query: 166 LQLIT 170
++ T
Sbjct: 243 WEIFT 247
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 94/185 (50%), Gaps = 16/185 (8%)
Query: 2 IAVKQHK-DASSQGDREFKSEVQVLSK-ARHENVVMLLGSCSDGNKRLLVYEYVCNGSLD 59
+AVK K DA+ + + SE++++ +H+N++ LLG+C+ ++ EY G+L
Sbjct: 52 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 111
Query: 60 QHL--------------SKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNIL 105
++L S + LS + + A A+G++YL IHRD+ N+L
Sbjct: 112 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 171
Query: 106 VTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVL 165
VT D + DFGLA+ Y T + ++APE + + ++DV+SFGV+L
Sbjct: 172 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL 231
Query: 166 LQLIT 170
++ T
Sbjct: 232 WEIFT 236
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 88/169 (52%), Gaps = 3/169 (1%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+A+K K+ S D EF E +V+ HE +V L G C+ ++ EY+ NG L +
Sbjct: 35 VAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 93
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L + R ++ +++ + ++YL +HRD+ N LV + DFGL++
Sbjct: 94 L-REMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSR 152
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+D +Y++ G + + PE + K S+K+D+++FGV++ ++ +
Sbjct: 153 YVLDD-EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 200
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 94/185 (50%), Gaps = 16/185 (8%)
Query: 2 IAVKQHK-DASSQGDREFKSEVQVLSK-ARHENVVMLLGSCSDGNKRLLVYEYVCNGSLD 59
+AVK K DA+ + + SE++++ +H+N++ LLG+C+ ++ EY G+L
Sbjct: 104 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 163
Query: 60 QHL--------------SKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNIL 105
++L S + LS + + A A+G++YL IHRD+ N+L
Sbjct: 164 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 223
Query: 106 VTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVL 165
VT D + DFGLA+ Y T + ++APE + + ++DV+SFGV+L
Sbjct: 224 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL 283
Query: 166 LQLIT 170
++ T
Sbjct: 284 WEIFT 288
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 88/169 (52%), Gaps = 3/169 (1%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+A+K K+ S D EF E +V+ HE +V L G C+ ++ EY+ NG L +
Sbjct: 36 VAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 94
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L + R ++ +++ + ++YL +HRD+ N LV + DFGL++
Sbjct: 95 L-REMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSR 153
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+D +Y++ G + + PE + K S+K+D+++FGV++ ++ +
Sbjct: 154 YVLDD-EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 83/159 (52%), Gaps = 7/159 (4%)
Query: 18 FKSEVQVLSKARHENVVMLL----GSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWE 73
F+ E Q + H +V + G +V EYV +L + HT P++ +
Sbjct: 76 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV--HTEGPMTPK 133
Query: 74 KRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTET 133
+ +++ A + L + H+N IIHRD+ P NI+++ + DFG+A+ + + T+T
Sbjct: 134 RAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 193
Query: 134 -GVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
V+GT YL+PE + ++DVYS G VL +++TG
Sbjct: 194 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 232
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 88/169 (52%), Gaps = 3/169 (1%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+A+K K+ S D EF E +V+ HE +V L G C+ ++ EY+ NG L +
Sbjct: 51 VAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 109
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L + R ++ +++ + ++YL +HRD+ N LV + DFGL++
Sbjct: 110 L-REMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSR 168
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+D +Y++ G + + PE + K S+K+D+++FGV++ ++ +
Sbjct: 169 YVLDD-EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 94/183 (51%), Gaps = 14/183 (7%)
Query: 2 IAVKQHKDASSQGDRE-FKSEVQVLSKARHENVVML------LGSCSDGNKRLLVYEYVC 54
+A+KQ + S +RE + E+Q++ K H NVV L + + LL EY
Sbjct: 42 VAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCE 101
Query: 55 NGSLDQHLSKHTRTPLSWEKRMKIALG-AAKGLQYLHENNIIHRDMGPNNILVTHDFEPM 113
G L ++L++ E ++ L + L+YLHEN IIHRD+ P NI++ + +
Sbjct: 102 GGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRL 161
Query: 114 LG---DFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+ D G AK + + + TE VGTL YLAPE +E K + D +SFG + + IT
Sbjct: 162 IHKIIDLGYAK-ELDQGELCTE--FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECIT 218
Query: 171 GLK 173
G +
Sbjct: 219 GFR 221
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 94/183 (51%), Gaps = 14/183 (7%)
Query: 2 IAVKQHKDASSQGDRE-FKSEVQVLSKARHENVVML------LGSCSDGNKRLLVYEYVC 54
+A+KQ + S +RE + E+Q++ K H NVV L + + LL EY
Sbjct: 43 VAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCE 102
Query: 55 NGSLDQHLSKHTRTPLSWEKRMKIALG-AAKGLQYLHENNIIHRDMGPNNILVTHDFEPM 113
G L ++L++ E ++ L + L+YLHEN IIHRD+ P NI++ + +
Sbjct: 103 GGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRL 162
Query: 114 LG---DFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+ D G AK + + + TE VGTL YLAPE +E K + D +SFG + + IT
Sbjct: 163 IHKIIDLGYAK-ELDQGELCTE--FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECIT 219
Query: 171 GLK 173
G +
Sbjct: 220 GFR 222
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 88/169 (52%), Gaps = 3/169 (1%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+A+K K+ S D EF E +V+ HE +V L G C+ ++ EY+ NG L +
Sbjct: 42 VAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 100
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L + R ++ +++ + ++YL +HRD+ N LV + DFGL++
Sbjct: 101 L-REMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSR 159
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+D +Y++ G + + PE + K S+K+D+++FGV++ ++ +
Sbjct: 160 YVLDD-EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 207
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 93/192 (48%), Gaps = 23/192 (11%)
Query: 2 IAVKQHKDASSQGD-REFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+AVK K+ +S + R+ SE VL + H +V+ L G+CS LL+ EY GSL
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 61 HLSKHTRT----------------------PLSWEKRMKIALGAAKGLQYLHENNIIHRD 98
L + + L+ + A ++G+QYL E ++HRD
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRD 175
Query: 99 MGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDV 158
+ NILV + + DFGL++ E+ Y + + ++A E + +T++DV
Sbjct: 176 LAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDV 235
Query: 159 YSFGVVLLQLIT 170
+SFGV+L +++T
Sbjct: 236 WSFGVLLWEIVT 247
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 88/169 (52%), Gaps = 3/169 (1%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+A+K K+ S D EF E +V+ HE +V L G C+ ++ EY+ NG L +
Sbjct: 36 VAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 94
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L + R ++ +++ + ++YL +HRD+ N LV + DFGL++
Sbjct: 95 L-REMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSR 153
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+D +Y++ G + + PE + K S+K+D+++FGV++ ++ +
Sbjct: 154 YVLDD-EYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 82/159 (51%), Gaps = 7/159 (4%)
Query: 18 FKSEVQVLSKARHENVVMLL----GSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWE 73
F+ E Q + H +V + G +V EYV +L + HT P++ +
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV--HTEGPMTPK 116
Query: 74 KRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTET 133
+ +++ A + L + H+N IIHRD+ P NIL++ + DFG+A+ + + +T
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQT 176
Query: 134 -GVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
V+GT YL+PE + ++DVYS G VL +++TG
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 95/185 (51%), Gaps = 16/185 (8%)
Query: 2 IAVKQHKDASSQGD-REFKSEVQVLSK-ARHENVVMLLGSCSDGNKRLLVYEYVCNGSLD 59
+AVK KD +++ D + SE++++ +H+N++ LLG+C+ ++ EY G+L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLR 129
Query: 60 QHLSKH-----------TRTP---LSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNIL 105
++L R P ++++ + A+G++YL IHRD+ N+L
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL 189
Query: 106 VTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVL 165
VT + + DFGLA+ Y T + ++APE + + ++DV+SFGV++
Sbjct: 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 166 LQLIT 170
++ T
Sbjct: 250 WEIFT 254
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 95/185 (51%), Gaps = 16/185 (8%)
Query: 2 IAVKQHKDASSQGD-REFKSEVQVLSK-ARHENVVMLLGSCSDGNKRLLVYEYVCNGSLD 59
+AVK KD +++ D + SE++++ +H+N++ LLG+C+ ++ EY G+L
Sbjct: 116 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 175
Query: 60 QHLSKH-----------TRTP---LSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNIL 105
++L R P ++++ + A+G++YL IHRD+ N+L
Sbjct: 176 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL 235
Query: 106 VTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVL 165
VT + + DFGLA+ Y T + ++APE + + ++DV+SFGV++
Sbjct: 236 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 295
Query: 166 LQLIT 170
++ T
Sbjct: 296 WEIFT 300
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 85/169 (50%), Gaps = 2/169 (1%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+AVK K + + F E ++ +H+ +V L + ++ E++ GSL
Sbjct: 39 VAVKTLK-PGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDF 97
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L + K + + A+G+ Y+ N IHRD+ N+LV+ + DFGLA+
Sbjct: 98 LKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLAR 157
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
ED++Y+ G + + APE + G + K++V+SFG++L +++T
Sbjct: 158 V-IEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVT 205
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 92/173 (53%), Gaps = 7/173 (4%)
Query: 3 AVKQHKDASSQGD-REFKSEVQVLSKARHENVVMLLGSC--SDGNKRLLVYEYVCNGSLD 59
AVK + G+ +F +E ++ H NV+ LLG C S+G+ L+V Y+ +G L
Sbjct: 60 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDLR 118
Query: 60 QHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGL 119
+ T P + + + L AKG+++L +HRD+ N ++ F + DFGL
Sbjct: 119 NFIRNETHNP-TVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGL 177
Query: 120 AKTQ--REDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
A+ +E +TG + ++A E ++ K +TK+DV+SFGV+L +L+T
Sbjct: 178 ARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 92/173 (53%), Gaps = 7/173 (4%)
Query: 3 AVKQHKDASSQGD-REFKSEVQVLSKARHENVVMLLGSC--SDGNKRLLVYEYVCNGSLD 59
AVK + G+ +F +E ++ H NV+ LLG C S+G+ L+V Y+ +G L
Sbjct: 121 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDLR 179
Query: 60 QHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGL 119
+ T P + + + L AKG+++L +HRD+ N ++ F + DFGL
Sbjct: 180 NFIRNETHNP-TVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGL 238
Query: 120 AKTQ--REDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
A+ +E +TG + ++A E ++ K +TK+DV+SFGV+L +L+T
Sbjct: 239 ARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 291
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 95/185 (51%), Gaps = 16/185 (8%)
Query: 2 IAVKQHKDASSQGD-REFKSEVQVLSK-ARHENVVMLLGSCSDGNKRLLVYEYVCNGSLD 59
+AVK KD +++ D + SE++++ +H+N++ LLG+C+ ++ EY G+L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 60 QHLSKH-----------TRTP---LSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNIL 105
++L R P ++++ + A+G++YL IHRD+ N+L
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL 189
Query: 106 VTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVL 165
VT + + DFGLA+ Y T + ++APE + + ++DV+SFGV++
Sbjct: 190 VTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 166 LQLIT 170
++ T
Sbjct: 250 WEIFT 254
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 92/173 (53%), Gaps = 7/173 (4%)
Query: 3 AVKQHKDASSQGD-REFKSEVQVLSKARHENVVMLLGSC--SDGNKRLLVYEYVCNGSLD 59
AVK + G+ +F +E ++ H NV+ LLG C S+G+ L+V Y+ +G L
Sbjct: 63 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDLR 121
Query: 60 QHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGL 119
+ T P + + + L AKG+++L +HRD+ N ++ F + DFGL
Sbjct: 122 NFIRNETHNP-TVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGL 180
Query: 120 AK--TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
A+ +E +TG + ++A E ++ K +TK+DV+SFGV+L +L+T
Sbjct: 181 ARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 95/185 (51%), Gaps = 16/185 (8%)
Query: 2 IAVKQHKDASSQGD-REFKSEVQVLSK-ARHENVVMLLGSCSDGNKRLLVYEYVCNGSLD 59
+AVK KD +++ D + SE++++ +H+N++ LLG+C+ ++ EY G+L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLR 129
Query: 60 QHLSKH-----------TRTP---LSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNIL 105
++L R P ++++ + A+G++YL IHRD+ N+L
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL 189
Query: 106 VTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVL 165
VT + + DFGLA+ Y T + ++APE + + ++DV+SFGV++
Sbjct: 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 166 LQLIT 170
++ T
Sbjct: 250 WEIFT 254
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 92/173 (53%), Gaps = 7/173 (4%)
Query: 3 AVKQHKDASSQGD-REFKSEVQVLSKARHENVVMLLGSC--SDGNKRLLVYEYVCNGSLD 59
AVK + G+ +F +E ++ H NV+ LLG C S+G+ L+V Y+ +G L
Sbjct: 67 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDLR 125
Query: 60 QHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGL 119
+ T P + + + L AKG+++L +HRD+ N ++ F + DFGL
Sbjct: 126 NFIRNETHNP-TVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGL 184
Query: 120 AKTQ--REDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
A+ +E +TG + ++A E ++ K +TK+DV+SFGV+L +L+T
Sbjct: 185 ARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 237
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 92/173 (53%), Gaps = 7/173 (4%)
Query: 3 AVKQHKDASSQGD-REFKSEVQVLSKARHENVVMLLGSC--SDGNKRLLVYEYVCNGSLD 59
AVK + G+ +F +E ++ H NV+ LLG C S+G+ L+V Y+ +G L
Sbjct: 62 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDLR 120
Query: 60 QHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGL 119
+ T P + + + L AKG+++L +HRD+ N ++ F + DFGL
Sbjct: 121 NFIRNETHNP-TVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGL 179
Query: 120 AKTQ--REDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
A+ +E +TG + ++A E ++ K +TK+DV+SFGV+L +L+T
Sbjct: 180 ARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 80/159 (50%), Gaps = 8/159 (5%)
Query: 15 DREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
+ + + EV++ S RH N++ L G D + L+ EY G++ + L K +R E+
Sbjct: 56 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFD---EQ 112
Query: 75 RMKIALGA-AKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTET 133
R + A L Y H +IHRD+ P N+L+ + E + DFG + + S T
Sbjct: 113 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSV----HAPSSRRT 168
Query: 134 GVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGL 172
+ GTL YL PE +E K D++S GV+ + + G+
Sbjct: 169 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGM 207
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 95/185 (51%), Gaps = 16/185 (8%)
Query: 2 IAVKQHKDASSQGD-REFKSEVQVLSK-ARHENVVMLLGSCSDGNKRLLVYEYVCNGSLD 59
+AVK KD +++ D + SE++++ +H+N++ LLG+C+ ++ EY G+L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 60 QHLSKH-----------TRTP---LSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNIL 105
++L R P ++++ + A+G++YL IHRD+ N+L
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL 189
Query: 106 VTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVL 165
VT + + DFGLA+ Y T + ++APE + + ++DV+SFGV++
Sbjct: 190 VTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 166 LQLIT 170
++ T
Sbjct: 250 WEIFT 254
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 92/173 (53%), Gaps = 7/173 (4%)
Query: 3 AVKQHKDASSQGD-REFKSEVQVLSKARHENVVMLLGSC--SDGNKRLLVYEYVCNGSLD 59
AVK + G+ +F +E ++ H NV+ LLG C S+G+ L+V Y+ +G L
Sbjct: 63 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDLR 121
Query: 60 QHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGL 119
+ T P + + + L AKG+++L +HRD+ N ++ F + DFGL
Sbjct: 122 NFIRNETHNP-TVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGL 180
Query: 120 AKTQ--REDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
A+ +E +TG + ++A E ++ K +TK+DV+SFGV+L +L+T
Sbjct: 181 ARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 92/173 (53%), Gaps = 7/173 (4%)
Query: 3 AVKQHKDASSQGD-REFKSEVQVLSKARHENVVMLLGSC--SDGNKRLLVYEYVCNGSLD 59
AVK + G+ +F +E ++ H NV+ LLG C S+G+ L+V Y+ +G L
Sbjct: 62 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDLR 120
Query: 60 QHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGL 119
+ T P + + + L AKG+++L +HRD+ N ++ F + DFGL
Sbjct: 121 NFIRNETHNP-TVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGL 179
Query: 120 AKTQ--REDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
A+ +E +TG + ++A E ++ K +TK+DV+SFGV+L +L+T
Sbjct: 180 ARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 95/185 (51%), Gaps = 16/185 (8%)
Query: 2 IAVKQHKDASSQGD-REFKSEVQVLSK-ARHENVVMLLGSCSDGNKRLLVYEYVCNGSLD 59
+AVK KD +++ D + SE++++ +H+N++ LLG+C+ ++ EY G+L
Sbjct: 62 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 121
Query: 60 QHLSKH-----------TRTP---LSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNIL 105
++L R P ++++ + A+G++YL IHRD+ N+L
Sbjct: 122 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL 181
Query: 106 VTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVL 165
VT + + DFGLA+ Y T + ++APE + + ++DV+SFGV++
Sbjct: 182 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 241
Query: 166 LQLIT 170
++ T
Sbjct: 242 WEIFT 246
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 124/272 (45%), Gaps = 45/272 (16%)
Query: 2 IAVKQHKDASSQGD-REFKSEVQVLSK-ARHENVVMLLGSCSD-GNKRLLVYEYVCNGSL 58
+AVK K+ ++ + R SE+++L H NVV LLG+C+ G +++ E+ G+L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 59 DQHL--SKHTRTP--------LSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTH 108
+L ++ P L+ E + + AKG+++L IHRD+ NIL++
Sbjct: 120 STYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSE 179
Query: 109 DFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQL 168
+ DFGLA+ +D DY + L ++APE + + ++DV+SFGV+L ++
Sbjct: 180 KNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 239
Query: 169 IT-------GLKTNDKTLGEKGLVGWARPLLKE---RNYPDLIDPRIIDCYDVHQLFWMV 218
+ G+K +++ LKE PD P M
Sbjct: 240 FSLGASPYPGVKIDEEFXRR----------LKEGTRMRAPDYTTPE------------MY 277
Query: 219 QIAKKCLSKDPQKRLPMDTVVDALKSIMEGTA 250
Q C +P +R +V+ L ++++ A
Sbjct: 278 QTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 309
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 95/185 (51%), Gaps = 16/185 (8%)
Query: 2 IAVKQHKDASSQGD-REFKSEVQVLSK-ARHENVVMLLGSCSDGNKRLLVYEYVCNGSLD 59
+AVK KD +++ D + SE++++ +H+N++ LLG+C+ ++ EY G+L
Sbjct: 59 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 118
Query: 60 QHLSKH-----------TRTP---LSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNIL 105
++L R P ++++ + A+G++YL IHRD+ N+L
Sbjct: 119 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL 178
Query: 106 VTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVL 165
VT + + DFGLA+ Y T + ++APE + + ++DV+SFGV++
Sbjct: 179 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 238
Query: 166 LQLIT 170
++ T
Sbjct: 239 WEIFT 243
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 95/193 (49%), Gaps = 25/193 (12%)
Query: 2 IAVKQHKDASSQGD-REFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+AVK K+ +S + R+ SE VL + H +V+ L G+CS LL+ EY GSL
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 61 HLSKHTRT----------------------PLSWEKRMKIALGAAKGLQYLHENNIIHRD 98
L + + L+ + A ++G+QYL E +++HRD
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRD 175
Query: 99 MGPNNILVTHDFEPMLGDFGLAK-TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTD 157
+ NILV + + DFGL++ EDS G + + ++A E + +T++D
Sbjct: 176 LAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRI-PVKWMAIESLFDHIYTTQSD 234
Query: 158 VYSFGVVLLQLIT 170
V+SFGV+L +++T
Sbjct: 235 VWSFGVLLWEIVT 247
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 95/185 (51%), Gaps = 16/185 (8%)
Query: 2 IAVKQHKDASSQGD-REFKSEVQVLSK-ARHENVVMLLGSCSDGNKRLLVYEYVCNGSLD 59
+AVK KD +++ D + SE++++ +H+N++ LLG+C+ ++ EY G+L
Sbjct: 70 VAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 60 QHLSKH-----------TRTP---LSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNIL 105
++L R P ++++ + A+G++YL IHRD+ N+L
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL 189
Query: 106 VTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVL 165
VT + + DFGLA+ Y T + ++APE + + ++DV+SFGV++
Sbjct: 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 166 LQLIT 170
++ T
Sbjct: 250 WEIFT 254
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 94/193 (48%), Gaps = 25/193 (12%)
Query: 2 IAVKQHKDASSQGD-REFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+AVK K+ +S + R+ SE VL + H +V+ L G+CS LL+ EY GSL
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 61 HLSKHTRT----------------------PLSWEKRMKIALGAAKGLQYLHENNIIHRD 98
L + + L+ + A ++G+QYL E ++HRD
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRD 175
Query: 99 MGPNNILVTHDFEPMLGDFGLAK-TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTD 157
+ NILV + + DFGL++ EDS G + + ++A E + +T++D
Sbjct: 176 LAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRI-PVKWMAIESLFDHIYTTQSD 234
Query: 158 VYSFGVVLLQLIT 170
V+SFGV+L +++T
Sbjct: 235 VWSFGVLLWEIVT 247
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 16/185 (8%)
Query: 2 IAVKQHK-DASSQGDREFKSEVQVLSK-ARHENVVMLLGSCSDGNKRLLVYEYVCNGSLD 59
+AVK K DA+ + + SE++++ +H+N++ LLG+C+ ++ EY G+L
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 60 QHL--------------SKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNIL 105
++L S + LS + + A A+G++YL IHRD+ N+L
Sbjct: 123 EYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 182
Query: 106 VTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVL 165
VT D + DFGLA+ T + ++APE + + ++DV+SFGV+L
Sbjct: 183 VTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL 242
Query: 166 LQLIT 170
++ T
Sbjct: 243 WEIFT 247
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 86/178 (48%), Gaps = 9/178 (5%)
Query: 2 IAVKQHKDASSQGDR-EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+AVK + S+ D +F E ++SK H+N+V +G R ++ E + G L
Sbjct: 55 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 114
Query: 61 HLSKHTRTP-----LSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFE---P 112
L + P L+ + +A A G QYL EN+ IHRD+ N L+T
Sbjct: 115 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVA 174
Query: 113 MLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+GDFG+A+ S Y + + ++ PE G ++KTD +SFGV+L ++ +
Sbjct: 175 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 83/171 (48%), Gaps = 18/171 (10%)
Query: 12 SQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLS 71
SQ + E ++ + +H N++ L G C LV E+ G L++ LS P
Sbjct: 47 SQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPP-- 104
Query: 72 WEKRMKIALGAAKGLQYLHENNI---IHRDMGPNNILVTHDFEP--------MLGDFGLA 120
+ + A+ A+G+ YLH+ I IHRD+ +NIL+ E + DFGLA
Sbjct: 105 -DILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA 163
Query: 121 KTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
+ +T+ G ++APE + S +DV+S+GV+L +L+TG
Sbjct: 164 REWHR----TTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTG 210
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 94/173 (54%), Gaps = 9/173 (5%)
Query: 1 MIAVKQHKDASSQGDREFK-SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLD 59
++AVK+ D Q RE +EV ++ +HENVV + S G++ +V E++ G+L
Sbjct: 56 LVAVKK-MDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 114
Query: 60 QHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGL 119
+ HTR ++ E+ + L + L LH +IHRD+ ++IL+THD L DFG
Sbjct: 115 D-IVTHTR--MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGF 171
Query: 120 -AKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
A+ +E +VGT ++APE + + D++S G+++++++ G
Sbjct: 172 CAQVSKE---VPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 221
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 94/173 (54%), Gaps = 9/173 (5%)
Query: 1 MIAVKQHKDASSQGDREFK-SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLD 59
++AVK+ D Q RE +EV ++ +HENVV + S G++ +V E++ G+L
Sbjct: 58 LVAVKK-MDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 116
Query: 60 QHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGL 119
+ HTR ++ E+ + L + L LH +IHRD+ ++IL+THD L DFG
Sbjct: 117 D-IVTHTR--MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGF 173
Query: 120 -AKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
A+ +E +VGT ++APE + + D++S G+++++++ G
Sbjct: 174 CAQVSKE---VPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 223
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 14/162 (8%)
Query: 15 DREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
+ + + EV++ S RH N++ L G D + L+ EY G++ + L K +R E+
Sbjct: 56 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFD---EQ 112
Query: 75 RMKIALGA-AKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGL---AKTQREDSDYS 130
R + A L Y H +IHRD+ P N+L+ + E + DFG A + R D+
Sbjct: 113 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDT--- 169
Query: 131 TETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGL 172
+ GTL YL PE +E K D++S GV+ + + G+
Sbjct: 170 ----LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGM 207
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 87/169 (51%), Gaps = 3/169 (1%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+A+K K+ S D EF E +V+ HE +V L G C+ ++ EY+ NG L +
Sbjct: 51 VAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 109
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L + R ++ +++ + ++YL +HRD+ N LV + DFGL++
Sbjct: 110 L-REMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSR 168
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+D + S+ G + + PE + K S+K+D+++FGV++ ++ +
Sbjct: 169 YVLDDEETSS-VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 110/243 (45%), Gaps = 22/243 (9%)
Query: 1 MIAVK-QHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLD 59
M+A+K K+ K+E++ L RH+++ L NK +V EY G L
Sbjct: 37 MVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELF 96
Query: 60 QHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGL 119
++ R LS E+ + + Y+H HRD+ P N+L + L DFGL
Sbjct: 97 DYIISQDR--LSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGL 154
Query: 120 AKTQREDSDYSTETGVVGTLGYLAPEYVECGK--LSTKTDVYSFGVVLLQLITGLKTNDK 177
+ + DY +T G+L Y APE ++ GK L ++ DV+S G++L L+ G D
Sbjct: 155 CAKPKGNKDYHLQT-CCGSLAYAAPELIQ-GKSYLGSEADVWSMGILLYVLMCGFLPFDD 212
Query: 178 TLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQKRLPMDT 237
+ + + + + + + P + P I + ++ L DP+KR+ M
Sbjct: 213 ---DNVMALYKKIMRGKYDVPKWLSPSSI------------LLLQQMLQVDPKKRISMKN 257
Query: 238 VVD 240
+++
Sbjct: 258 LLN 260
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 86/178 (48%), Gaps = 9/178 (5%)
Query: 2 IAVKQHKDASSQGDR-EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+AVK + S+ D +F E ++SK H+N+V +G R ++ E + G L
Sbjct: 63 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKS 122
Query: 61 HLSKHTRTP-----LSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFE---P 112
L + P L+ + +A A G QYL EN+ IHRD+ N L+T
Sbjct: 123 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVA 182
Query: 113 MLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+GDFG+A+ S Y + + ++ PE G ++KTD +SFGV+L ++ +
Sbjct: 183 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 95/173 (54%), Gaps = 9/173 (5%)
Query: 1 MIAVKQHKDASSQGDREFK-SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLD 59
++AVK+ D Q RE +EV ++ +HENVV + S G++ +V E++ G+L
Sbjct: 178 LVAVKKM-DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 236
Query: 60 QHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGL 119
++ HTR ++ E+ + L + L LH +IHRD+ ++IL+THD L DFG
Sbjct: 237 DIVT-HTR--MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGF 293
Query: 120 -AKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
A+ +E +VGT ++APE + + D++S G+++++++ G
Sbjct: 294 CAQVSKE---VPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 343
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 95/185 (51%), Gaps = 16/185 (8%)
Query: 2 IAVKQHKDASSQGD-REFKSEVQVLSK-ARHENVVMLLGSCSDGNKRLLVYEYVCNGSLD 59
+AVK KD +++ D + SE++++ +H+N++ LLG+C+ ++ EY G+L
Sbjct: 57 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 116
Query: 60 QHLSKH-----------TRTP---LSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNIL 105
++L R P ++++ + A+G++YL IHRD+ N+L
Sbjct: 117 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVL 176
Query: 106 VTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVL 165
VT + + DFGLA+ Y T + ++APE + + ++DV+SFGV++
Sbjct: 177 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 236
Query: 166 LQLIT 170
++ T
Sbjct: 237 WEIFT 241
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 86/178 (48%), Gaps = 9/178 (5%)
Query: 2 IAVKQHKDASSQGDR-EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+AVK + S+ D +F E ++SK H+N+V +G R ++ E + G L
Sbjct: 63 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 122
Query: 61 HLSKHTRTP-----LSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFE---P 112
L + P L+ + +A A G QYL EN+ IHRD+ N L+T
Sbjct: 123 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVA 182
Query: 113 MLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+GDFG+A+ S Y + + ++ PE G ++KTD +SFGV+L ++ +
Sbjct: 183 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 86/178 (48%), Gaps = 9/178 (5%)
Query: 2 IAVKQHKDASSQGDR-EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+AVK + S+ D +F E ++SK H+N+V +G R ++ E + G L
Sbjct: 64 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 123
Query: 61 HLSKHTRTP-----LSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFE---P 112
L + P L+ + +A A G QYL EN+ IHRD+ N L+T
Sbjct: 124 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVA 183
Query: 113 MLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+GDFG+A+ S Y + + ++ PE G ++KTD +SFGV+L ++ +
Sbjct: 184 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 86/178 (48%), Gaps = 9/178 (5%)
Query: 2 IAVKQHKDASSQGDR-EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+AVK + S+ D +F E ++SK H+N+V +G R ++ E + G L
Sbjct: 64 VAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 123
Query: 61 HLSKHTRTP-----LSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFE---P 112
L + P L+ + +A A G QYL EN+ IHRD+ N L+T
Sbjct: 124 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVA 183
Query: 113 MLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+GDFG+A+ S Y + + ++ PE G ++KTD +SFGV+L ++ +
Sbjct: 184 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 94/173 (54%), Gaps = 9/173 (5%)
Query: 1 MIAVKQHKDASSQGDREFK-SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLD 59
++AVK+ D Q RE +EV ++ +HENVV + S G++ +V E++ G+L
Sbjct: 47 LVAVKK-MDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 105
Query: 60 QHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGL 119
+ HTR ++ E+ + L + L LH +IHRD+ ++IL+THD L DFG
Sbjct: 106 D-IVTHTR--MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGF 162
Query: 120 -AKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
A+ +E +VGT ++APE + + D++S G+++++++ G
Sbjct: 163 CAQVSKE---VPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 212
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 86/178 (48%), Gaps = 9/178 (5%)
Query: 2 IAVKQHKDASSQGDR-EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+AVK + S+ D +F E ++SK H+N+V +G R ++ E + G L
Sbjct: 70 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 129
Query: 61 HLSKHTRTP-----LSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFE---P 112
L + P L+ + +A A G QYL EN+ IHRD+ N L+T
Sbjct: 130 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVA 189
Query: 113 MLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+GDFG+A+ S Y + + ++ PE G ++KTD +SFGV+L ++ +
Sbjct: 190 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 86/178 (48%), Gaps = 9/178 (5%)
Query: 2 IAVKQHKDASSQGDR-EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+AVK + S+ D +F E ++SK H+N+V +G R ++ E + G L
Sbjct: 80 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 139
Query: 61 HLSKHTRTP-----LSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFE---P 112
L + P L+ + +A A G QYL EN+ IHRD+ N L+T
Sbjct: 140 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVA 199
Query: 113 MLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+GDFG+A+ S Y + + ++ PE G ++KTD +SFGV+L ++ +
Sbjct: 200 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 97/213 (45%), Gaps = 17/213 (7%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIAL 80
E V+S+ H V L + D K Y NG L +++ K + + +
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 141
Query: 81 GAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLG 140
+A L+YLH IIHRD+ P NIL+ D + DFG AK +S + VGT
Sbjct: 142 VSA--LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 141 YLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTNDKTLGEKGLVGWARPLLKERNYPDL 200
Y++PE + +D+++ G ++ QL+ GL G +GL+ +A+ + E ++P+
Sbjct: 200 YVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRA--GNEGLI-FAKIIKLEYDFPEK 256
Query: 201 IDPRIIDCYDVHQLFWMVQIAKKCLSKDPQKRL 233
P+ D + +K L D KRL
Sbjct: 257 FFPKARD------------LVEKLLVLDATKRL 277
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 94/173 (54%), Gaps = 9/173 (5%)
Query: 1 MIAVKQHKDASSQGDREFK-SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLD 59
++AVK+ D Q RE +EV ++ +HENVV + S G++ +V E++ G+L
Sbjct: 51 LVAVKK-MDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 109
Query: 60 QHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGL 119
+ HTR ++ E+ + L + L LH +IHRD+ ++IL+THD L DFG
Sbjct: 110 D-IVTHTR--MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGF 166
Query: 120 -AKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
A+ +E +VGT ++APE + + D++S G+++++++ G
Sbjct: 167 CAQVSKE---VPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 216
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 86/178 (48%), Gaps = 9/178 (5%)
Query: 2 IAVKQHKDASSQGDR-EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+AVK + S+ D +F E ++SK H+N+V +G R ++ E + G L
Sbjct: 78 VAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 137
Query: 61 HLSKHTRTP-----LSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFE---P 112
L + P L+ + +A A G QYL EN+ IHRD+ N L+T
Sbjct: 138 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVA 197
Query: 113 MLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+GDFG+A+ S Y + + ++ PE G ++KTD +SFGV+L ++ +
Sbjct: 198 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 97/213 (45%), Gaps = 17/213 (7%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIAL 80
E V+S+ H V L + D K Y NG L +++ K + + +
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 141
Query: 81 GAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLG 140
+A L+YLH IIHRD+ P NIL+ D + DFG AK +S + VGT
Sbjct: 142 VSA--LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 141 YLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTNDKTLGEKGLVGWARPLLKERNYPDL 200
Y++PE + +D+++ G ++ QL+ GL G +GL+ +A+ + E ++P+
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA--GNEGLI-FAKIIKLEYDFPEK 256
Query: 201 IDPRIIDCYDVHQLFWMVQIAKKCLSKDPQKRL 233
P+ D + +K L D KRL
Sbjct: 257 FFPKARD------------LVEKLLVLDATKRL 277
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 94/173 (54%), Gaps = 9/173 (5%)
Query: 1 MIAVKQHKDASSQGDREFK-SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLD 59
++AVK+ D Q RE +EV ++ +HENVV + S G++ +V E++ G+L
Sbjct: 101 LVAVKK-MDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 159
Query: 60 QHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGL 119
+ HTR ++ E+ + L + L LH +IHRD+ ++IL+THD L DFG
Sbjct: 160 D-IVTHTR--MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGF 216
Query: 120 -AKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
A+ +E +VGT ++APE + + D++S G+++++++ G
Sbjct: 217 CAQVSKE---VPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 266
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 86/178 (48%), Gaps = 9/178 (5%)
Query: 2 IAVKQHKDASSQGDR-EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+AVK + S+ D +F E ++SK H+N+V +G R ++ E + G L
Sbjct: 78 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKS 137
Query: 61 HLSKHTRTP-----LSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFE---P 112
L + P L+ + +A A G QYL EN+ IHRD+ N L+T
Sbjct: 138 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVA 197
Query: 113 MLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+GDFG+A+ S Y + + ++ PE G ++KTD +SFGV+L ++ +
Sbjct: 198 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 124/272 (45%), Gaps = 45/272 (16%)
Query: 2 IAVKQHKDASSQGD-REFKSEVQVLSK-ARHENVVMLLGSCSD-GNKRLLVYEYVCNGSL 58
+AVK K+ ++ + R SE+++L H NVV LLG+C+ G +++ E+ G+L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 59 DQHL--SKHTRTP--------LSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTH 108
+L ++ P L+ E + + AKG+++L IHRD+ NIL++
Sbjct: 120 STYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSE 179
Query: 109 DFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQL 168
+ DFGLA+ +D DY + L ++APE + + ++DV+SFGV+L ++
Sbjct: 180 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 239
Query: 169 IT-------GLKTNDKTLGEKGLVGWARPLLKE---RNYPDLIDPRIIDCYDVHQLFWMV 218
+ G+K +++ LKE PD P M
Sbjct: 240 FSLGASPYPGVKIDEEFCRR----------LKEGTRMRAPDYTTPE------------MY 277
Query: 219 QIAKKCLSKDPQKRLPMDTVVDALKSIMEGTA 250
Q C +P +R +V+ L ++++ A
Sbjct: 278 QTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 309
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 86/178 (48%), Gaps = 9/178 (5%)
Query: 2 IAVKQHKDASSQGDR-EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+AVK + S+ D +F E ++SK H+N+V +G R ++ E + G L
Sbjct: 64 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 123
Query: 61 HLSKHTRTP-----LSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFE---P 112
L + P L+ + +A A G QYL EN+ IHRD+ N L+T
Sbjct: 124 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVA 183
Query: 113 MLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+GDFG+A+ S Y + + ++ PE G ++KTD +SFGV+L ++ +
Sbjct: 184 KIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 86/178 (48%), Gaps = 9/178 (5%)
Query: 2 IAVKQHKDASSQGDR-EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+AVK + S+ D +F E ++SK H+N+V +G R ++ E + G L
Sbjct: 90 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 149
Query: 61 HLSKHTRTP-----LSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFE---P 112
L + P L+ + +A A G QYL EN+ IHRD+ N L+T
Sbjct: 150 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVA 209
Query: 113 MLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+GDFG+A+ S Y + + ++ PE G ++KTD +SFGV+L ++ +
Sbjct: 210 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 88/174 (50%), Gaps = 14/174 (8%)
Query: 1 MIAVKQHKDASSQGDREFK---SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGS 57
++A+K+ + Q + +++ EV+ L K RH N + G + LV EY C GS
Sbjct: 81 VVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY-CLGS 139
Query: 58 LDQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDF 117
L H + PL + + GA +GL YLH +N+IHRD+ NIL++ LGDF
Sbjct: 140 ASDLLEVHKK-PLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDF 198
Query: 118 GLAKTQREDSDYSTETGVVGTLGYLAPEYV---ECGKLSTKTDVYSFGVVLLQL 168
G A S + VGT ++APE + + G+ K DV+S G+ ++L
Sbjct: 199 GSA------SIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 246
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 105/212 (49%), Gaps = 19/212 (8%)
Query: 2 IAVKQHKDASSQGDREFK-SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+AVK+ D Q RE +EV ++ H+NVV + S G++ +V E++ G+L
Sbjct: 73 VAVKK-MDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTD 131
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGL- 119
+ HTR ++ E+ + L + L YLH +IHRD+ ++IL+T D L DFG
Sbjct: 132 -IVTHTR--MNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFC 188
Query: 120 AKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTNDKTL 179
A+ +E +VGT ++APE + T+ D++S G++++++I G
Sbjct: 189 AQVSKE---VPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDG---EPPYF 242
Query: 180 GEKGLVGWARPLLKERNYPDLIDPRIIDCYDV 211
E PL R D + PR+ D + V
Sbjct: 243 NEP-------PLQAMRRIRDSLPPRVKDLHKV 267
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 86/178 (48%), Gaps = 9/178 (5%)
Query: 2 IAVKQHKDASSQGDR-EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+AVK + S+ D +F E ++SK H+N+V +G R ++ E + G L
Sbjct: 78 VAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 137
Query: 61 HLSKHTRTP-----LSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFE---P 112
L + P L+ + +A A G QYL EN+ IHRD+ N L+T
Sbjct: 138 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVA 197
Query: 113 MLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+GDFG+A+ S Y + + ++ PE G ++KTD +SFGV+L ++ +
Sbjct: 198 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 88/174 (50%), Gaps = 14/174 (8%)
Query: 1 MIAVKQHKDASSQGDREFKS---EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGS 57
++A+K+ + Q + +++ EV+ L K RH N + G + LV EY C GS
Sbjct: 42 VVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY-CLGS 100
Query: 58 LDQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDF 117
L H + PL + + GA +GL YLH +N+IHRD+ NIL++ LGDF
Sbjct: 101 ASDLLEVHKK-PLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDF 159
Query: 118 GLAKTQREDSDYSTETGVVGTLGYLAPEYV---ECGKLSTKTDVYSFGVVLLQL 168
G A S + VGT ++APE + + G+ K DV+S G+ ++L
Sbjct: 160 GSA------SIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 88/180 (48%), Gaps = 20/180 (11%)
Query: 1 MIAVKQHKDASSQGDRE-FKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLD 59
++A + D S+ + E + E+ +L+ H N+V LL + N ++ E+ G++D
Sbjct: 36 VLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVD 95
Query: 60 QHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGL 119
+ + R PL+ + + L YLH+N IIHRD+ NIL T D + L DFG+
Sbjct: 96 AVMLELER-PLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGV 154
Query: 120 AK------TQREDSDYSTETGVVGTLGYLAPEYVECGK-----LSTKTDVYSFGVVLLQL 168
+ QR DS +GT ++APE V C K DV+S G+ L+++
Sbjct: 155 SAKNTRTXIQRRDS-------FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 88/179 (49%), Gaps = 19/179 (10%)
Query: 1 MIAVKQHKDASSQGDRE-FKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLD 59
++A + D S+ + E + E+ +L+ H N+V LL + N ++ E+ G++D
Sbjct: 63 VLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVD 122
Query: 60 QHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGL 119
+ + R PL+ + + L YLH+N IIHRD+ NIL T D + L DFG+
Sbjct: 123 AVMLELER-PLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGV 181
Query: 120 AK-----TQREDSDYSTETGVVGTLGYLAPEYVECGK-----LSTKTDVYSFGVVLLQL 168
+ QR DS +GT ++APE V C K DV+S G+ L+++
Sbjct: 182 SAKNTRTIQRRDS-------FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 88/179 (49%), Gaps = 19/179 (10%)
Query: 1 MIAVKQHKDASSQGDRE-FKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLD 59
++A + D S+ + E + E+ +L+ H N+V LL + N ++ E+ G++D
Sbjct: 63 VLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVD 122
Query: 60 QHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGL 119
+ + R PL+ + + L YLH+N IIHRD+ NIL T D + L DFG+
Sbjct: 123 AVMLELER-PLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGV 181
Query: 120 AK-----TQREDSDYSTETGVVGTLGYLAPEYVECGK-----LSTKTDVYSFGVVLLQL 168
+ QR DS +GT ++APE V C K DV+S G+ L+++
Sbjct: 182 SAKNTRXIQRRDS-------FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 124/279 (44%), Gaps = 49/279 (17%)
Query: 2 IAVKQHKDASSQGD-REFKSEVQVLSK-ARHENVVMLLGSCSD-GNKRLLVYEYVCNGSL 58
+AVK K+ ++ + R SE+++L H NVV LLG+C+ G +++ E+ G+L
Sbjct: 62 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 121
Query: 59 DQHLSK-------HTRTP-------LSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNI 104
+L + P L+ E + + AKG+++L IHRD+ NI
Sbjct: 122 STYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNI 181
Query: 105 LVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVV 164
L++ + DFGLA+ +D DY + L ++APE + + ++DV+SFGV+
Sbjct: 182 LLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVL 241
Query: 165 LLQLIT-------GLKTNDKTLGEKGLVGWARPLLKE---RNYPDLIDPRIIDCYDVHQL 214
L ++ + G+K +++ LKE PD P
Sbjct: 242 LWEIFSLGASPYPGVKIDEEFCRR----------LKEGTRMRAPDYTTPE---------- 281
Query: 215 FWMVQIAKKCLSKDPQKRLPMDTVVDALKSIMEGTATSN 253
M Q C +P +R +V+ L ++++ A +
Sbjct: 282 --MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQD 318
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 125/279 (44%), Gaps = 49/279 (17%)
Query: 2 IAVKQHKDASSQGD-REFKSEVQVLSK-ARHENVVMLLGSCSD-GNKRLLVYEYVCNGSL 58
+AVK K+ ++ + R SE+++L H NVV LLG+C+ G +++ E+ G+L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 59 DQHL--SKHTRTP------------LSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNI 104
+L ++ P L+ E + + AKG+++L IHRD+ NI
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNI 179
Query: 105 LVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVV 164
L++ + DFGLA+ +D DY + L ++APE + + ++DV+SFGV+
Sbjct: 180 LLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVL 239
Query: 165 LLQLIT-------GLKTNDKTLGEKGLVGWARPLLKE---RNYPDLIDPRIIDCYDVHQL 214
L ++ + G+K +++ LKE PD P
Sbjct: 240 LWEIFSLGASPYPGVKIDEEFCRR----------LKEGTRMRAPDYTTPE---------- 279
Query: 215 FWMVQIAKKCLSKDPQKRLPMDTVVDALKSIMEGTATSN 253
M Q C +P +R +V+ L ++++ A +
Sbjct: 280 --MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQD 316
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 88/172 (51%), Gaps = 6/172 (3%)
Query: 2 IAVKQHKDASSQGD-REFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K K + + D E E Q++ + + +V L+G C +LV E G L +
Sbjct: 40 VAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-AEALMLVMEMAGGGPLHK 98
Query: 61 HL-SKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGL 119
L K P+S ++ + G++YL E N +HRD+ N+L+ + + DFGL
Sbjct: 99 FLVGKREEIPVS--NVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGL 156
Query: 120 AKT-QREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+K +DS Y+ + L + APE + K S+++DV+S+GV + + ++
Sbjct: 157 SKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 208
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 94/185 (50%), Gaps = 16/185 (8%)
Query: 2 IAVKQHKDASSQGD-REFKSEVQVLSK-ARHENVVMLLGSCSDGNKRLLVYEYVCNGSLD 59
+AVK KD +++ D + SE++++ +H+N++ LLG+C+ ++ Y G+L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLR 129
Query: 60 QHLSKH-----------TRTP---LSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNIL 105
++L R P ++++ + A+G++YL IHRD+ N+L
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL 189
Query: 106 VTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVL 165
VT + + DFGLA+ Y T + ++APE + + ++DV+SFGV++
Sbjct: 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 166 LQLIT 170
++ T
Sbjct: 250 WEIFT 254
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 125/279 (44%), Gaps = 49/279 (17%)
Query: 2 IAVKQHKDASSQGD-REFKSEVQVLSK-ARHENVVMLLGSCSD-GNKRLLVYEYVCNGSL 58
+AVK K+ ++ + R SE+++L H NVV LLG+C+ G +++ E+ G+L
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNL 110
Query: 59 DQHL--SKHTRTP------------LSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNI 104
+L ++ P L+ E + + AKG+++L IHRD+ NI
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNI 170
Query: 105 LVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVV 164
L++ + DFGLA+ +D DY + L ++APE + + ++DV+SFGV+
Sbjct: 171 LLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVL 230
Query: 165 LLQLIT-------GLKTNDKTLGEKGLVGWARPLLKE---RNYPDLIDPRIIDCYDVHQL 214
L ++ + G+K +++ LKE PD P
Sbjct: 231 LWEIFSLGASPYPGVKIDEEFCRR----------LKEGTRMRAPDYTTPE---------- 270
Query: 215 FWMVQIAKKCLSKDPQKRLPMDTVVDALKSIMEGTATSN 253
M Q C +P +R +V+ L ++++ A +
Sbjct: 271 --MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQD 307
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 125/279 (44%), Gaps = 49/279 (17%)
Query: 2 IAVKQHKDASSQGD-REFKSEVQVLSK-ARHENVVMLLGSCSD-GNKRLLVYEYVCNGSL 58
+AVK K+ ++ + R SE+++L H NVV LLG+C+ G +++ E+ G+L
Sbjct: 97 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 156
Query: 59 DQHL--SKHTRTP------------LSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNI 104
+L ++ P L+ E + + AKG+++L IHRD+ NI
Sbjct: 157 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNI 216
Query: 105 LVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVV 164
L++ + DFGLA+ +D DY + L ++APE + + ++DV+SFGV+
Sbjct: 217 LLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVL 276
Query: 165 LLQLIT-------GLKTNDKTLGEKGLVGWARPLLKE---RNYPDLIDPRIIDCYDVHQL 214
L ++ + G+K +++ LKE PD P
Sbjct: 277 LWEIFSLGASPYPGVKIDEEFCRR----------LKEGTRMRAPDYTTPE---------- 316
Query: 215 FWMVQIAKKCLSKDPQKRLPMDTVVDALKSIMEGTATSN 253
M Q C +P +R +V+ L ++++ A +
Sbjct: 317 --MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQD 353
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 125/279 (44%), Gaps = 49/279 (17%)
Query: 2 IAVKQHKDASSQGD-REFKSEVQVLSK-ARHENVVMLLGSCSD-GNKRLLVYEYVCNGSL 58
+AVK K+ ++ + R SE+++L H NVV LLG+C+ G +++ E+ G+L
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNL 110
Query: 59 DQHL--SKHTRTP------------LSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNI 104
+L ++ P L+ E + + AKG+++L IHRD+ NI
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNI 170
Query: 105 LVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVV 164
L++ + DFGLA+ +D DY + L ++APE + + ++DV+SFGV+
Sbjct: 171 LLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVL 230
Query: 165 LLQLIT-------GLKTNDKTLGEKGLVGWARPLLKE---RNYPDLIDPRIIDCYDVHQL 214
L ++ + G+K +++ LKE PD P
Sbjct: 231 LWEIFSLGASPYPGVKIDEEFCRR----------LKEGTRMRAPDYTTPE---------- 270
Query: 215 FWMVQIAKKCLSKDPQKRLPMDTVVDALKSIMEGTATSN 253
M Q C +P +R +V+ L ++++ A +
Sbjct: 271 --MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQD 307
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 77/158 (48%), Gaps = 8/158 (5%)
Query: 15 DREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
+ + + EV++ S RH N++ L G D + L+ EY G + + L K ++ E+
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFD---EQ 113
Query: 75 RMKIALGA-AKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTET 133
R + A L Y H +IHRD+ P N+L+ E + DFG + + S T
Sbjct: 114 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRT 169
Query: 134 GVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
+ GTL YL PE +E K D++S GV+ + + G
Sbjct: 170 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 207
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 94/185 (50%), Gaps = 16/185 (8%)
Query: 2 IAVKQHKDASSQGD-REFKSEVQVLSK-ARHENVVMLLGSCSDGNKRLLVYEYVCNGSLD 59
+AVK KD +++ D + SE++++ +H+N++ LLG+C+ ++ EY G+L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 60 QHLSKH-----------TRTP---LSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNIL 105
++L R P ++++ + A+G++YL IHRD+ N+L
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL 189
Query: 106 VTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVL 165
VT + + DFGLA+ T + ++APE + + ++DV+SFGV++
Sbjct: 190 VTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 166 LQLIT 170
++ T
Sbjct: 250 WEIFT 254
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 9/178 (5%)
Query: 2 IAVKQHKDASSQGDR-EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+AVK + S+ D +F E ++SK H+N+V +G R ++ E + G L
Sbjct: 104 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 163
Query: 61 HLSKHTRTP-----LSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFE---P 112
L + P L+ + +A A G QYL EN+ IHRD+ N L+T
Sbjct: 164 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVA 223
Query: 113 MLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+GDFG+A+ Y + + ++ PE G ++KTD +SFGV+L ++ +
Sbjct: 224 KIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 94/185 (50%), Gaps = 16/185 (8%)
Query: 2 IAVKQHKDASSQGD-REFKSEVQVLSK-ARHENVVMLLGSCSDGNKRLLVYEYVCNGSLD 59
+AVK KD +++ D + SE++++ +H+N++ LLG+C+ ++ EY G+L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 60 QHLSKH-----------TRTP---LSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNIL 105
++L R P ++++ + A+G++YL IHRD+ N+L
Sbjct: 130 EYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL 189
Query: 106 VTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVL 165
VT + + DFGLA+ T + ++APE + + ++DV+SFGV++
Sbjct: 190 VTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 166 LQLIT 170
++ T
Sbjct: 250 WEIFT 254
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 9/178 (5%)
Query: 2 IAVKQHKDASSQGDR-EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+AVK + S+ D +F E ++SK H+N+V +G R ++ E + G L
Sbjct: 81 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 140
Query: 61 HLSKHTRTP-----LSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFE---P 112
L + P L+ + +A A G QYL EN+ IHRD+ N L+T
Sbjct: 141 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVA 200
Query: 113 MLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+GDFG+A+ Y + + ++ PE G ++KTD +SFGV+L ++ +
Sbjct: 201 KIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 6/157 (3%)
Query: 15 DREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
+ + + EV++ S RH N++ L G D + L+ EY G++ + L K ++ ++
Sbjct: 78 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQR 135
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
A L Y H +IHRD+ P N+L+ E + DFG + + S T
Sbjct: 136 TATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTT 191
Query: 135 VVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
+ GTL YL PE +E K D++S GV+ + + G
Sbjct: 192 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 228
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 8/158 (5%)
Query: 15 DREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
+ + + EV++ S RH N++ L G D + L+ EY G++ + L K ++ E+
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD---EQ 113
Query: 75 RMKIALGA-AKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTET 133
R + A L Y H +IHRD+ P N+L+ E + DFG + + S T
Sbjct: 114 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRT 169
Query: 134 GVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
+ GTL YL PE +E K D++S GV+ + + G
Sbjct: 170 TLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVG 207
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 8/158 (5%)
Query: 15 DREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
+ + + EV++ S RH N++ L G D + L+ EY G++ + L K ++ E+
Sbjct: 51 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD---EQ 107
Query: 75 RMKIALGA-AKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTET 133
R + A L Y H +IHRD+ P N+L+ E + DFG + + S T
Sbjct: 108 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRT 163
Query: 134 GVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
+ GTL YL PE +E K D++S GV+ + + G
Sbjct: 164 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 201
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 8/158 (5%)
Query: 15 DREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
+ + + EV++ S RH N++ L G D + L+ EY G++ + L K ++ E+
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD---EQ 108
Query: 75 RMKIALGA-AKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTET 133
R + A L Y H +IHRD+ P N+L+ E + DFG + + S T
Sbjct: 109 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRT 164
Query: 134 GVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
+ GTL YL PE +E K D++S GV+ + + G
Sbjct: 165 DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 202
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 8/158 (5%)
Query: 15 DREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
+ + + EV++ S RH N++ L G D + L+ EY G++ + L K ++ E+
Sbjct: 53 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD---EQ 109
Query: 75 RMKIALGA-AKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTET 133
R + A L Y H +IHRD+ P N+L+ E + DFG + + S T
Sbjct: 110 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRT 165
Query: 134 GVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
+ GTL YL PE +E K D++S GV+ + + G
Sbjct: 166 DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 203
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 94/185 (50%), Gaps = 16/185 (8%)
Query: 2 IAVKQHKDASSQGD-REFKSEVQVLSK-ARHENVVMLLGSCSDGNKRLLVYEYVCNGSLD 59
+AVK KD +++ D + SE++++ +H+N++ LLG+C+ ++ Y G+L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLR 129
Query: 60 QHLSKH-----------TRTP---LSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNIL 105
++L R P ++++ + A+G++YL IHRD+ N+L
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL 189
Query: 106 VTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVL 165
VT + + DFGLA+ Y T + ++APE + + ++DV+SFGV++
Sbjct: 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 166 LQLIT 170
++ T
Sbjct: 250 WEIFT 254
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 8/158 (5%)
Query: 15 DREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
+ + + EV++ S RH N++ L G D + L+ EY G++ + L K ++ E+
Sbjct: 49 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD---EQ 105
Query: 75 RMKIALGA-AKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTET 133
R + A L Y H +IHRD+ P N+L+ E + DFG + + S T
Sbjct: 106 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRT 161
Query: 134 GVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
+ GTL YL PE +E K D++S GV+ + + G
Sbjct: 162 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 199
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 2/160 (1%)
Query: 11 SSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPL 70
SS+ E + EV VL+ +H N+V S + +V +Y G L + ++
Sbjct: 63 SSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLF 122
Query: 71 SWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYS 130
++ + + L+++H+ I+HRD+ NI +T D LGDFG+A+ +S
Sbjct: 123 QEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVL--NSTVE 180
Query: 131 TETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+GT YL+PE E + K+D+++ G VL +L T
Sbjct: 181 LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCT 220
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 8/158 (5%)
Query: 15 DREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
+ + + EV++ S RH N++ L G D + L+ EY G++ + L K ++ E+
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD---EQ 108
Query: 75 RMKIALGA-AKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTET 133
R + A L Y H +IHRD+ P N+L+ E + DFG + + S T
Sbjct: 109 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRT 164
Query: 134 GVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
+ GTL YL PE +E K D++S GV+ + + G
Sbjct: 165 XLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 202
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 8/158 (5%)
Query: 15 DREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
+ + + EV++ S RH N++ L G D + L+ EY G++ + L K ++ E+
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD---EQ 108
Query: 75 RMKIALGA-AKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTET 133
R + A L Y H +IHRD+ P N+L+ E + DFG + + S T
Sbjct: 109 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRT 164
Query: 134 GVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
+ GTL YL PE +E K D++S GV+ + + G
Sbjct: 165 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 202
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 8/158 (5%)
Query: 15 DREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
+ + + EV++ S RH N++ L G D + L+ EY G++ + L K ++ E+
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD---EQ 108
Query: 75 RMKIALGA-AKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTET 133
R + A L Y H +IHRD+ P N+L+ E + DFG + + S T
Sbjct: 109 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRT 164
Query: 134 GVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
+ GTL YL PE +E K D++S GV+ + + G
Sbjct: 165 DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 202
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 8/158 (5%)
Query: 15 DREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
+ + + EV++ S RH N++ L G D + L+ EY G++ + L K ++ E+
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD---EQ 111
Query: 75 RMKIALGA-AKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTET 133
R + A L Y H +IHRD+ P N+L+ E + DFG + + S T
Sbjct: 112 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRT 167
Query: 134 GVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
+ GTL YL PE +E K D++S GV+ + + G
Sbjct: 168 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 205
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 92/176 (52%), Gaps = 9/176 (5%)
Query: 2 IAVKQHKDASSQGDREFK-SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K+ K S +G E+ ++ + +HEN+V L NK LV+E++ N L +
Sbjct: 33 VALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMDN-DLKK 91
Query: 61 HLSKHT--RTPLSWEKRM--KIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGD 116
++ T TP E + +GL + HEN I+HRD+ P N+L+ + LGD
Sbjct: 92 YMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGD 151
Query: 117 FGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGK-LSTKTDVYSFGVVLLQLITG 171
FGLA+ +T + V TL Y AP+ + + ST D++S G +L ++ITG
Sbjct: 152 FGLARA--FGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITG 205
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 96/184 (52%), Gaps = 14/184 (7%)
Query: 13 QGDRE-FKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLS-KHTRTPL 70
+ D+E + E+Q +S RH +V L + D N+ +++YE++ G L + ++ +H + +
Sbjct: 89 ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK--M 146
Query: 71 SWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVT--HDFEPMLGDFGLAKTQREDSD 128
S ++ ++ KGL ++HENN +H D+ P NI+ T E L DFGL T D
Sbjct: 147 SEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGL--TAHLDPK 204
Query: 129 YSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGL-----KTNDKTLGEKG 183
S + GT + APE E + TD++S GV+ L++GL + +D+TL
Sbjct: 205 QSVKV-TTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVK 263
Query: 184 LVGW 187
W
Sbjct: 264 SCDW 267
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 126/278 (45%), Gaps = 48/278 (17%)
Query: 2 IAVKQHKDASSQGD-REFKSEVQVLSK-ARHENVVMLLGSCSD-GNKRLLVYEYVCNGSL 58
+AVK K+ ++ + R SE+++L H NVV LLG+C+ G +++ E+ G+L
Sbjct: 61 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 120
Query: 59 DQHL-SKHT-----RTP-------LSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNIL 105
+L SK +TP L+ E + + AKG+++L IHRD+ NIL
Sbjct: 121 STYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNIL 180
Query: 106 VTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVL 165
++ + DFGLA+ +D D + L ++APE + + ++DV+SFGV+L
Sbjct: 181 LSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 240
Query: 166 LQLIT-------GLKTNDKTLGEKGLVGWARPLLKE---RNYPDLIDPRIIDCYDVHQLF 215
++ + G+K +++ LKE PD P
Sbjct: 241 WEIFSLGASPYPGVKIDEEFCRR----------LKEGTRMRAPDYTTPE----------- 279
Query: 216 WMVQIAKKCLSKDPQKRLPMDTVVDALKSIMEGTATSN 253
M Q C +P +R +V+ L ++++ A +
Sbjct: 280 -MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQD 316
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 8/158 (5%)
Query: 15 DREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
+ + + EV++ S RH N++ L G D + L+ EY G++ + L K ++ E+
Sbjct: 56 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD---EQ 112
Query: 75 RMKIALGA-AKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTET 133
R + A L Y H +IHRD+ P N+L+ E + DFG + + S T
Sbjct: 113 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRT 168
Query: 134 GVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
+ GTL YL PE +E K D++S GV+ + + G
Sbjct: 169 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 8/158 (5%)
Query: 15 DREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
+ + + EV++ S RH N++ L G D + L+ EY G++ + L K ++ E+
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD---EQ 111
Query: 75 RMKIALGA-AKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTET 133
R + A L Y H +IHRD+ P N+L+ E + DFG + + S T
Sbjct: 112 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRT 167
Query: 134 GVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
+ GTL YL PE +E K D++S GV+ + + G
Sbjct: 168 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 205
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 8/158 (5%)
Query: 15 DREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
+ + + EV++ S RH N++ L G D + L+ EY G++ + L K ++ E+
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD---EQ 113
Query: 75 RMKIALGA-AKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTET 133
R + A L Y H +IHRD+ P N+L+ E + DFG + + S T
Sbjct: 114 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRT 169
Query: 134 GVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
+ GTL YL PE +E K D++S GV+ + + G
Sbjct: 170 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 207
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 8/158 (5%)
Query: 15 DREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
+ + + EV++ S RH N++ L G D + L+ EY G++ + L K ++ E+
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD---EQ 108
Query: 75 RMKIALGA-AKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTET 133
R + A L Y H +IHRD+ P N+L+ E + DFG + + S T
Sbjct: 109 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRT 164
Query: 134 GVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
+ GTL YL PE +E K D++S GV+ + + G
Sbjct: 165 ELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 202
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 8/158 (5%)
Query: 15 DREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
+ + + EV++ S RH N++ L G D + L+ EY G++ + L K ++ E+
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD---EQ 113
Query: 75 RMKIALGA-AKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTET 133
R + A L Y H +IHRD+ P N+L+ E + DFG + + S T
Sbjct: 114 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRT 169
Query: 134 GVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
+ GTL YL PE +E K D++S GV+ + + G
Sbjct: 170 DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 207
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 96/184 (52%), Gaps = 14/184 (7%)
Query: 13 QGDRE-FKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLS-KHTRTPL 70
+ D+E + E+Q +S RH +V L + D N+ +++YE++ G L + ++ +H + +
Sbjct: 195 ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK--M 252
Query: 71 SWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVT--HDFEPMLGDFGLAKTQREDSD 128
S ++ ++ KGL ++HENN +H D+ P NI+ T E L DFGL T D
Sbjct: 253 SEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGL--TAHLDPK 310
Query: 129 YSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGL-----KTNDKTLGEKG 183
S + GT + APE E + TD++S GV+ L++GL + +D+TL
Sbjct: 311 QSVKV-TTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVK 369
Query: 184 LVGW 187
W
Sbjct: 370 SCDW 373
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 8/158 (5%)
Query: 15 DREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
+ + + EV++ S RH N++ L G D + L+ EY G++ + L K ++ E+
Sbjct: 69 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD---EQ 125
Query: 75 RMKIALGA-AKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTET 133
R + A L Y H +IHRD+ P N+L+ E + DFG + + S T
Sbjct: 126 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRT 181
Query: 134 GVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
+ GTL YL PE +E K D++S GV+ + + G
Sbjct: 182 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 219
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 85/175 (48%), Gaps = 11/175 (6%)
Query: 1 MIAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSL-D 59
+ A+K K + + D ++E+ VL K +HEN+V L LV + V G L D
Sbjct: 36 LFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFD 95
Query: 60 QHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILV---THDFEPMLGD 116
+ L + T ++ L A K YLHEN I+HRD+ P N+L + + M+ D
Sbjct: 96 RILERGVYTEKDASLVIQQVLSAVK---YLHENGIVHRDLKPENLLYLTPEENSKIMITD 152
Query: 117 FGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
FGL+K ++ + GT GY+APE + S D +S GV+ L+ G
Sbjct: 153 FGLSKMEQN----GIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 8/158 (5%)
Query: 15 DREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
+ + + EV++ S RH N++ L G D + L+ EY G++ + L K ++ E+
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD---EQ 108
Query: 75 RMKIALGA-AKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTET 133
R + A L Y H +IHRD+ P N+L+ E + DFG + + S
Sbjct: 109 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRA 164
Query: 134 GVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
+ GTL YL PE +E K D++S GV+ + + G
Sbjct: 165 ALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 202
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 14/161 (8%)
Query: 15 DREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
+ + + EV++ S RH N++ L G D + L+ EY G++ + L K ++ E+
Sbjct: 53 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD---EQ 109
Query: 75 RMKIALGA-AKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGL---AKTQREDSDYS 130
R + A L Y H +IHRD+ P N+L+ E + DFG A + R D+
Sbjct: 110 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDT--- 166
Query: 131 TETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
+ GTL YL PE +E K D++S GV+ + + G
Sbjct: 167 ----LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 203
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 8/158 (5%)
Query: 15 DREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
+ + + EV++ S RH N++ L G D + L+ EY G++ + L K ++ E+
Sbjct: 53 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD---EQ 109
Query: 75 RMKIALGA-AKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTET 133
R + A L Y H +IHRD+ P N+L+ E + DFG + + S T
Sbjct: 110 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSC----HAPSSRRT 165
Query: 134 GVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
+ GTL YL PE +E K D++S GV+ + + G
Sbjct: 166 TLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 203
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 19/179 (10%)
Query: 1 MIAVKQHKDASSQGDRE-FKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLD 59
++A + D S+ + E + E+ +L+ H N+V LL + N ++ E+ G++D
Sbjct: 63 VLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVD 122
Query: 60 QHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGL 119
+ + R PL+ + + L YLH+N IIHRD+ NIL T D + L DFG+
Sbjct: 123 AVMLELER-PLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGV 181
Query: 120 AK-----TQREDSDYSTETGVVGTLGYLAPEYVECGK-----LSTKTDVYSFGVVLLQL 168
+ QR D +GT ++APE V C K DV+S G+ L+++
Sbjct: 182 SAKNTRXIQRRDX-------FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 73/152 (48%), Gaps = 2/152 (1%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIAL 80
E V+S+ H V L + D K Y NG L +++ K + + +
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEI 141
Query: 81 GAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLG 140
+A L+YLH IIHRD+ P NIL+ D + DFG AK +S + VGT
Sbjct: 142 VSA--LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 199
Query: 141 YLAPEYVECGKLSTKTDVYSFGVVLLQLITGL 172
Y++PE + S +D+++ G ++ QL+ GL
Sbjct: 200 YVSPELLTEKSASKSSDLWALGCIIYQLVAGL 231
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 8/158 (5%)
Query: 15 DREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
+ + + EV++ S RH N++ L G D + L+ EY G++ + L K ++ E+
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFD---EQ 108
Query: 75 RMKIALGA-AKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTET 133
R + A L Y H +IHRD+ P N+L+ E + DFG + + S
Sbjct: 109 RTATYITELANALSYCHSKKVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRA 164
Query: 134 GVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
+ GTL YL PE +E K D++S GV+ + + G
Sbjct: 165 ALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 202
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 124/277 (44%), Gaps = 47/277 (16%)
Query: 2 IAVKQHKDASSQGD-REFKSEVQVLSK-ARHENVVMLLGSCSD-GNKRLLVYEYVCNGSL 58
+AVK K+ ++ + R SE+++L H NVV LLG+C+ G +++ E+ G+L
Sbjct: 62 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 121
Query: 59 DQHL--SKHTRTP----------LSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILV 106
+L ++ P L+ E + + AKG+++L IHRD+ NIL+
Sbjct: 122 STYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILL 181
Query: 107 THDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLL 166
+ + DFGLA+ +D D + L ++APE + + ++DV+SFGV+L
Sbjct: 182 SEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLW 241
Query: 167 QLIT-------GLKTNDKTLGEKGLVGWARPLLKE---RNYPDLIDPRIIDCYDVHQLFW 216
++ + G+K +++ LKE PD P
Sbjct: 242 EIFSLGASPYPGVKIDEEFCRR----------LKEGTRMRAPDYTTPE------------ 279
Query: 217 MVQIAKKCLSKDPQKRLPMDTVVDALKSIMEGTATSN 253
M Q C +P +R +V+ L ++++ A +
Sbjct: 280 MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQD 316
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 81/152 (53%), Gaps = 7/152 (4%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIAL 80
E+QVL + +V G+ + + E++ GSLDQ L + R P E K+++
Sbjct: 64 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIP--EEILGKVSI 121
Query: 81 GAAKGLQYLHE-NNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTL 139
+GL YL E + I+HRD+ P+NILV E L DFG++ + S VGT
Sbjct: 122 AVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTR 177
Query: 140 GYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
Y+APE ++ S ++D++S G+ L++L G
Sbjct: 178 SYMAPERLQGTHYSVQSDIWSMGLSLVELAVG 209
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 8/158 (5%)
Query: 15 DREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
+ + + EV++ S RH N++ L G D + L+ EY G++ + L K ++ E+
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD---EQ 111
Query: 75 RMKIALGA-AKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTET 133
R + A L Y H +IHRD+ P N+L+ E + DFG + + S
Sbjct: 112 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRA 167
Query: 134 GVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
+ GTL YL PE +E K D++S GV+ + + G
Sbjct: 168 ALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 205
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 92/183 (50%), Gaps = 7/183 (3%)
Query: 2 IAVKQHKDASSQGD-REFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K K + + D E E Q++ + + +V L+G C +LV E G L +
Sbjct: 366 VAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-AEALMLVMEMAGGGPLHK 424
Query: 61 HL-SKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGL 119
L K P+S ++ + G++YL E N +HR++ N+L+ + + DFGL
Sbjct: 425 FLVGKREEIPVS--NVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGL 482
Query: 120 AKT-QREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT-GLKTNDK 177
+K +DS Y+ + L + APE + K S+++DV+S+GV + + ++ G K K
Sbjct: 483 SKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKK 542
Query: 178 TLG 180
G
Sbjct: 543 MKG 545
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 12/160 (7%)
Query: 15 DREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
+ + + EV++ S RH N++ L G D + L+ EY G++ + L K ++ ++
Sbjct: 78 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQR 135
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGL---AKTQREDSDYST 131
A L Y H +IHRD+ P N+L+ E + DFG A + R D
Sbjct: 136 TATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDD---- 191
Query: 132 ETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
+ GTL YL PE +E K D++S GV+ + + G
Sbjct: 192 ---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 228
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 117/262 (44%), Gaps = 37/262 (14%)
Query: 1 MIAVKQHKDASSQGD-------REFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYV 53
++A+K S+G+ +EF+ EV ++S H N+V L G N +V E+V
Sbjct: 46 VVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMH--NPPRMVMEFV 103
Query: 54 CNGSLDQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENN--IIHRDMGPNNILVTHDFE 111
G L L P+ W ++++ L A G++Y+ N I+HRD+ NI + E
Sbjct: 104 PCGDLYHRLLDKAH-PIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDE 162
Query: 112 -----PMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYV--ECGKLSTKTDVYSFGVV 164
+ DFGL++ + +G++G ++APE + E + K D YSF ++
Sbjct: 163 NAPVCAKVADFGLSQ-----QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMI 217
Query: 165 LLQLITGLKTNDK-TLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKK 223
L ++TG D+ + G+ + R P+ PR+ + ++
Sbjct: 218 LYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIEL------------ 265
Query: 224 CLSKDPQKRLPMDTVVDALKSI 245
C S DP+KR +V L +
Sbjct: 266 CWSGDPKKRPHFSYIVKELSEL 287
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 78/161 (48%), Gaps = 14/161 (8%)
Query: 15 DREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
+ + + EV++ S RH N++ L G D + L+ EY G++ + L K ++ E+
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD---EQ 111
Query: 75 RMKIALGA-AKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGL---AKTQREDSDYS 130
R + A L Y H +IHRD+ P N+L+ E + DFG A + R D
Sbjct: 112 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDD--- 168
Query: 131 TETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
+ GTL YL PE +E K D++S GV+ + + G
Sbjct: 169 ----LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 205
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 6/162 (3%)
Query: 15 DREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
+ + + E+++ S RH N++ + D + L+ E+ G L + L KH R ++
Sbjct: 58 EHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR--FDEQR 115
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
A L Y HE +IHRD+ P N+L+ + E + DFG + +
Sbjct: 116 SATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSV----HAPSLRRRX 171
Query: 135 VVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTND 176
+ GTL YL PE +E K D++ GV+ + + G+ D
Sbjct: 172 MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 6/162 (3%)
Query: 15 DREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
+ + + E+++ S RH N++ + D + L+ E+ G L + L KH R ++
Sbjct: 58 EHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR--FDEQR 115
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
A L Y HE +IHRD+ P N+L+ + E + DFG + +
Sbjct: 116 SATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSV----HAPSLRRRX 171
Query: 135 VVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTND 176
+ GTL YL PE +E K D++ GV+ + + G+ D
Sbjct: 172 MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 8/158 (5%)
Query: 15 DREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
+ + + EV++ S RH N++ L G D + L+ EY G + + L K ++ E+
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFD---EQ 113
Query: 75 RMKIALGA-AKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTET 133
R + A L Y H +IHRD+ P N+L+ E + DFG + + S
Sbjct: 114 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRX 169
Query: 134 GVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
+ GTL YL PE +E K D++S GV+ + + G
Sbjct: 170 XLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 207
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 6/162 (3%)
Query: 15 DREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
+ + + E+++ S RH N++ + D + L+ E+ G L + L KH R ++
Sbjct: 59 EHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR--FDEQR 116
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
A L Y HE +IHRD+ P N+L+ + E + DFG + +
Sbjct: 117 SATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSV----HAPSLRRRX 172
Query: 135 VVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTND 176
+ GTL YL PE +E K D++ GV+ + + G+ D
Sbjct: 173 MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 78/158 (49%), Gaps = 8/158 (5%)
Query: 15 DREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
+ + + EV++ S RH N++ L G D + L+ EY G++ + L K ++ E+
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD---EQ 111
Query: 75 RMKIALGA-AKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTET 133
R + A L Y H +IHRD+ P N+L+ E + +FG + + S T
Sbjct: 112 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSV----HAPSSRRT 167
Query: 134 GVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
+ GTL YL PE +E K D++S GV+ + + G
Sbjct: 168 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 205
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 81/152 (53%), Gaps = 7/152 (4%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIAL 80
E+QVL + +V G+ + + E++ GSLDQ L K R P ++ IA+
Sbjct: 116 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV 175
Query: 81 GAAKGLQYLHENN-IIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTL 139
KGL YL E + I+HRD+ P+NILV E L DFG++ + S VGT
Sbjct: 176 --IKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTR 229
Query: 140 GYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
Y++PE ++ S ++D++S G+ L+++ G
Sbjct: 230 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 261
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 78/158 (49%), Gaps = 8/158 (5%)
Query: 15 DREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
+ + + EV++ S RH N++ L G D + L+ EY G++ + L K ++ E+
Sbjct: 54 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD---EQ 110
Query: 75 RMKIALGA-AKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTET 133
R + A L Y H +IHRD+ P N+L+ E + +FG + + S T
Sbjct: 111 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSV----HAPSSRRT 166
Query: 134 GVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
+ GTL YL PE +E K D++S GV+ + + G
Sbjct: 167 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 204
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 83/153 (54%), Gaps = 9/153 (5%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRM-KIA 79
E+QVL + +V G+ + + E++ GSLDQ L K R P E+ + K++
Sbjct: 54 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP---EQILGKVS 110
Query: 80 LGAAKGLQYLHENN-IIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
+ KGL YL E + I+HRD+ P+NILV E L DFG++ + S VGT
Sbjct: 111 IAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGT 166
Query: 139 LGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
Y++PE ++ S ++D++S G+ L+++ G
Sbjct: 167 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 81/152 (53%), Gaps = 7/152 (4%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIAL 80
E+QVL + +V G+ + + E++ GSLDQ L K R P ++ IA+
Sbjct: 54 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV 113
Query: 81 GAAKGLQYLHENN-IIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTL 139
KGL YL E + I+HRD+ P+NILV E L DFG++ + S VGT
Sbjct: 114 --IKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTR 167
Query: 140 GYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
Y++PE ++ S ++D++S G+ L+++ G
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 8/158 (5%)
Query: 15 DREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
+ + + EV++ S RH N++ L G D + L+ EY G++ + L K ++ E+
Sbjct: 54 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD---EQ 110
Query: 75 RMKIALGA-AKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTET 133
R + A L Y H +IHRD+ P N+L+ E + DFG + + S
Sbjct: 111 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRX 166
Query: 134 GVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
+ GTL YL PE +E K D++S GV+ + + G
Sbjct: 167 XLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 204
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 8/158 (5%)
Query: 15 DREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
+ + + EV++ S RH N++ L G D + L+ EY G++ + L K ++ E+
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD---EQ 108
Query: 75 RMKIALGA-AKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTET 133
R + A L Y H +IHRD+ P N+L+ E + DFG + + S
Sbjct: 109 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRX 164
Query: 134 GVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
+ GTL YL PE +E K D++S GV+ + + G
Sbjct: 165 XLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 202
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 124/279 (44%), Gaps = 49/279 (17%)
Query: 2 IAVKQHKDASSQGD-REFKSEVQVLSK-ARHENVVMLLGSCSD-GNKRLLVYEYVCNGSL 58
+AVK K+ ++ + R SE+++L H NVV LLG+C+ G +++ E+ G+L
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 110
Query: 59 DQHL--SKHTRTP------------LSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNI 104
+L ++ P L+ E + + AKG+++L IHRD+ NI
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNI 170
Query: 105 LVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVV 164
L++ + DFGLA+ +D D + L ++APE + + ++DV+SFGV+
Sbjct: 171 LLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVL 230
Query: 165 LLQLIT-------GLKTNDKTLGEKGLVGWARPLLKE---RNYPDLIDPRIIDCYDVHQL 214
L ++ + G+K +++ LKE PD P
Sbjct: 231 LWEIFSLGASPYPGVKIDEEFCRR----------LKEGTRMRAPDYTTPE---------- 270
Query: 215 FWMVQIAKKCLSKDPQKRLPMDTVVDALKSIMEGTATSN 253
M Q C +P +R +V+ L ++++ A +
Sbjct: 271 --MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQD 307
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 83/153 (54%), Gaps = 9/153 (5%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRM-KIA 79
E+QVL + +V G+ + + E++ GSLDQ L K R P E+ + K++
Sbjct: 54 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP---EQILGKVS 110
Query: 80 LGAAKGLQYLHENN-IIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
+ KGL YL E + I+HRD+ P+NILV E L DFG++ + S VGT
Sbjct: 111 IAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGT 166
Query: 139 LGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
Y++PE ++ S ++D++S G+ L+++ G
Sbjct: 167 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 83/153 (54%), Gaps = 9/153 (5%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRM-KIA 79
E+QVL + +V G+ + + E++ GSLDQ L K R P E+ + K++
Sbjct: 54 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP---EQILGKVS 110
Query: 80 LGAAKGLQYLHENN-IIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
+ KGL YL E + I+HRD+ P+NILV E L DFG++ + S VGT
Sbjct: 111 IAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGT 166
Query: 139 LGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
Y++PE ++ S ++D++S G+ L+++ G
Sbjct: 167 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 81/152 (53%), Gaps = 7/152 (4%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIAL 80
E+QVL + +V G+ + + E++ GSLDQ L K R P ++ IA+
Sbjct: 54 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV 113
Query: 81 GAAKGLQYLHENN-IIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTL 139
KGL YL E + I+HRD+ P+NILV E L DFG++ + S VGT
Sbjct: 114 --IKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTR 167
Query: 140 GYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
Y++PE ++ S ++D++S G+ L+++ G
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 8/158 (5%)
Query: 15 DREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
+ + + EV++ S RH N++ L G D + L+ EY G++ + L K ++ E+
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD---EQ 111
Query: 75 RMKIALGA-AKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTET 133
R + A L Y H +IHRD+ P N+L+ E + DFG + + S
Sbjct: 112 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRX 167
Query: 134 GVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
+ GTL YL PE +E K D++S GV+ + + G
Sbjct: 168 XLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 205
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 81/152 (53%), Gaps = 7/152 (4%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIAL 80
E+QVL + +V G+ + + E++ GSLDQ L K R P ++ IA+
Sbjct: 81 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV 140
Query: 81 GAAKGLQYLHENN-IIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTL 139
KGL YL E + I+HRD+ P+NILV E L DFG++ + S VGT
Sbjct: 141 --IKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTR 194
Query: 140 GYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
Y++PE ++ S ++D++S G+ L+++ G
Sbjct: 195 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 226
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 124/279 (44%), Gaps = 49/279 (17%)
Query: 2 IAVKQHKDASSQGD-REFKSEVQVLSK-ARHENVVMLLGSCSD-GNKRLLVYEYVCNGSL 58
+AVK K+ ++ + R SE+++L H NVV LLG+C+ G +++ E+ G+L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 59 DQHL--SKHTRTP------------LSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNI 104
+L ++ P L+ E + + AKG+++L IHRD+ NI
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNI 179
Query: 105 LVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVV 164
L++ + DFGLA+ +D D + L ++APE + + ++DV+SFGV+
Sbjct: 180 LLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVL 239
Query: 165 LLQLIT-------GLKTNDKTLGEKGLVGWARPLLKE---RNYPDLIDPRIIDCYDVHQL 214
L ++ + G+K +++ LKE PD P
Sbjct: 240 LWEIFSLGASPYPGVKIDEEFCRR----------LKEGTRMRAPDYTTPE---------- 279
Query: 215 FWMVQIAKKCLSKDPQKRLPMDTVVDALKSIMEGTATSN 253
M Q C +P +R +V+ L ++++ A +
Sbjct: 280 --MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQD 316
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 89/184 (48%), Gaps = 15/184 (8%)
Query: 2 IAVKQHKDASSQGDRE-FKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K KD + RE F+ E + ++ +H NVV LLG + +++ Y +G L +
Sbjct: 59 VAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHE 118
Query: 61 HL---SKHT-----------RTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILV 106
L S H+ ++ L + + A G++YL ++++H+D+ N+LV
Sbjct: 119 FLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLV 178
Query: 107 THDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLL 166
+ D GL + Y + + ++APE + GK S +D++S+GVVL
Sbjct: 179 YDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLW 238
Query: 167 QLIT 170
++ +
Sbjct: 239 EVFS 242
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 72/152 (47%), Gaps = 2/152 (1%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIAL 80
E V+S+ H V L + D K Y NG L +++ K + + +
Sbjct: 80 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 139
Query: 81 GAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLG 140
+A L+YLH IIHRD+ P NIL+ D + DFG AK +S + VGT
Sbjct: 140 VSA--LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQ 197
Query: 141 YLAPEYVECGKLSTKTDVYSFGVVLLQLITGL 172
Y++PE + +D+++ G ++ QL+ GL
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAGL 229
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 124/279 (44%), Gaps = 49/279 (17%)
Query: 2 IAVKQHKDASSQGD-REFKSEVQVLSK-ARHENVVMLLGSCSD-GNKRLLVYEYVCNGSL 58
+AVK K+ ++ + R SE+++L H NVV LLG+C+ G +++ E+ G+L
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNL 110
Query: 59 DQHL--SKHTRTP------------LSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNI 104
+L ++ P L+ E + + AKG+++L IHRD+ NI
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNI 170
Query: 105 LVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVV 164
L++ + DFGLA+ +D D + L ++APE + + ++DV+SFGV+
Sbjct: 171 LLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVL 230
Query: 165 LLQLIT-------GLKTNDKTLGEKGLVGWARPLLKE---RNYPDLIDPRIIDCYDVHQL 214
L ++ + G+K +++ LKE PD P
Sbjct: 231 LWEIFSLGASPYPGVKIDEEFCRR----------LKEGTRMRAPDYTTPE---------- 270
Query: 215 FWMVQIAKKCLSKDPQKRLPMDTVVDALKSIMEGTATSN 253
M Q C +P +R +V+ L ++++ A +
Sbjct: 271 --MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQD 307
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 89/184 (48%), Gaps = 15/184 (8%)
Query: 2 IAVKQHKDASSQGDRE-FKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K KD + RE F+ E + ++ +H NVV LLG + +++ Y +G L +
Sbjct: 42 VAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHE 101
Query: 61 HL---SKHT-----------RTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILV 106
L S H+ ++ L + + A G++YL ++++H+D+ N+LV
Sbjct: 102 FLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLV 161
Query: 107 THDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLL 166
+ D GL + Y + + ++APE + GK S +D++S+GVVL
Sbjct: 162 YDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLW 221
Query: 167 QLIT 170
++ +
Sbjct: 222 EVFS 225
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 72/152 (47%), Gaps = 2/152 (1%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIAL 80
E V+S+ H V L + D K Y NG L +++ K + + +
Sbjct: 60 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 119
Query: 81 GAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLG 140
+A L+YLH IIHRD+ P NIL+ D + DFG AK +S + VGT
Sbjct: 120 VSA--LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 177
Query: 141 YLAPEYVECGKLSTKTDVYSFGVVLLQLITGL 172
Y++PE + +D+++ G ++ QL+ GL
Sbjct: 178 YVSPELLTEKSACKSSDLWALGCIIYQLVAGL 209
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 124/279 (44%), Gaps = 49/279 (17%)
Query: 2 IAVKQHKDASSQGD-REFKSEVQVLSK-ARHENVVMLLGSCSD-GNKRLLVYEYVCNGSL 58
+AVK K+ ++ + R SE+++L H NVV LLG+C+ G +++ E+ G+L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 59 DQHL--SKHTRTP------------LSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNI 104
+L ++ P L+ E + + AKG+++L IHRD+ NI
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNI 179
Query: 105 LVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVV 164
L++ + DFGLA+ +D D + L ++APE + + ++DV+SFGV+
Sbjct: 180 LLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVL 239
Query: 165 LLQLIT-------GLKTNDKTLGEKGLVGWARPLLKE---RNYPDLIDPRIIDCYDVHQL 214
L ++ + G+K +++ LKE PD P
Sbjct: 240 LWEIFSLGASPYPGVKIDEEFCRR----------LKEGTRMRAPDYTTPE---------- 279
Query: 215 FWMVQIAKKCLSKDPQKRLPMDTVVDALKSIMEGTATSN 253
M Q C +P +R +V+ L ++++ A +
Sbjct: 280 --MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQD 316
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 72/152 (47%), Gaps = 2/152 (1%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIAL 80
E V+S+ H V L + D K Y NG L +++ K + + +
Sbjct: 59 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 118
Query: 81 GAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLG 140
+A L+YLH IIHRD+ P NIL+ D + DFG AK +S + VGT
Sbjct: 119 VSA--LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 176
Query: 141 YLAPEYVECGKLSTKTDVYSFGVVLLQLITGL 172
Y++PE + +D+++ G ++ QL+ GL
Sbjct: 177 YVSPELLTEKSACKSSDLWALGCIIYQLVAGL 208
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 83/153 (54%), Gaps = 9/153 (5%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRM-KIA 79
E+QVL + +V G+ + + E++ GSLDQ L K R P E+ + K++
Sbjct: 73 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP---EQILGKVS 129
Query: 80 LGAAKGLQYLHENN-IIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
+ KGL YL E + I+HRD+ P+NILV E L DFG++ + S VGT
Sbjct: 130 IAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGT 185
Query: 139 LGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
Y++PE ++ S ++D++S G+ L+++ G
Sbjct: 186 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 218
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 72/152 (47%), Gaps = 2/152 (1%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIAL 80
E V+S+ H V L + D K Y NG L +++ K + + +
Sbjct: 83 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 142
Query: 81 GAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLG 140
+A L+YLH IIHRD+ P NIL+ D + DFG AK +S + VGT
Sbjct: 143 VSA--LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 200
Query: 141 YLAPEYVECGKLSTKTDVYSFGVVLLQLITGL 172
Y++PE + +D+++ G ++ QL+ GL
Sbjct: 201 YVSPELLTEKSACKSSDLWALGCIIYQLVAGL 232
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 85/157 (54%), Gaps = 8/157 (5%)
Query: 17 EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHL--SKHTRTPLSWEK 74
E +E V+ + + +V ++G C + +LV E G L+++L ++H + +
Sbjct: 74 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD----KN 128
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSD-YSTET 133
+++ + G++YL E+N +HRD+ N+L+ + DFGL+K R D + Y +T
Sbjct: 129 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 188
Query: 134 GVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+ + APE + K S+K+DV+SFGV++ + +
Sbjct: 189 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 85/157 (54%), Gaps = 8/157 (5%)
Query: 17 EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHL--SKHTRTPLSWEK 74
E +E V+ + + +V ++G C + +LV E G L+++L ++H + +
Sbjct: 74 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD----KN 128
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSD-YSTET 133
+++ + G++YL E+N +HRD+ N+L+ + DFGL+K R D + Y +T
Sbjct: 129 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 188
Query: 134 GVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+ + APE + K S+K+DV+SFGV++ + +
Sbjct: 189 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 72/152 (47%), Gaps = 2/152 (1%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIAL 80
E V+S+ H V L + D K Y NG L +++ K + + +
Sbjct: 58 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 117
Query: 81 GAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLG 140
+A L+YLH IIHRD+ P NIL+ D + DFG AK +S + VGT
Sbjct: 118 VSA--LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 175
Query: 141 YLAPEYVECGKLSTKTDVYSFGVVLLQLITGL 172
Y++PE + +D+++ G ++ QL+ GL
Sbjct: 176 YVSPELLTEKSACKSSDLWALGCIIYQLVAGL 207
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 85/157 (54%), Gaps = 8/157 (5%)
Query: 17 EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHL--SKHTRTPLSWEK 74
E +E V+ + + +V ++G C + +LV E G L+++L ++H + +
Sbjct: 72 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD----KN 126
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSD-YSTET 133
+++ + G++YL E+N +HRD+ N+L+ + DFGL+K R D + Y +T
Sbjct: 127 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 186
Query: 134 GVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+ + APE + K S+K+DV+SFGV++ + +
Sbjct: 187 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 72/152 (47%), Gaps = 2/152 (1%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIAL 80
E V+S+ H V L + D K Y NG L +++ K + + +
Sbjct: 57 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 116
Query: 81 GAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLG 140
+A L+YLH IIHRD+ P NIL+ D + DFG AK +S + VGT
Sbjct: 117 VSA--LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 174
Query: 141 YLAPEYVECGKLSTKTDVYSFGVVLLQLITGL 172
Y++PE + +D+++ G ++ QL+ GL
Sbjct: 175 YVSPELLTEKSACKSSDLWALGCIIYQLVAGL 206
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 87/171 (50%), Gaps = 7/171 (4%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+A++Q +E+ V+ + ++ N+V L S G++ +V EY+ GSL
Sbjct: 48 VAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV 107
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGL-A 120
+ T T + + + + L++LH N +IHRD+ +NIL+ D L DFG A
Sbjct: 108 V---TETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCA 164
Query: 121 KTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
+ E S ST +VGT ++APE V K D++S G++ +++I G
Sbjct: 165 QITPEQSKRST---MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 212
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 85/157 (54%), Gaps = 8/157 (5%)
Query: 17 EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHL--SKHTRTPLSWEK 74
E +E V+ + + +V ++G C + +LV E G L+++L ++H + +
Sbjct: 64 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD----KN 118
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSD-YSTET 133
+++ + G++YL E+N +HRD+ N+L+ + DFGL+K R D + Y +T
Sbjct: 119 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 178
Query: 134 GVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+ + APE + K S+K+DV+SFGV++ + +
Sbjct: 179 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 85/157 (54%), Gaps = 8/157 (5%)
Query: 17 EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHL--SKHTRTPLSWEK 74
E +E V+ + + +V ++G C + +LV E G L+++L ++H + +
Sbjct: 58 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD----KN 112
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSD-YSTET 133
+++ + G++YL E+N +HRD+ N+L+ + DFGL+K R D + Y +T
Sbjct: 113 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQT 172
Query: 134 GVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+ + APE + K S+K+DV+SFGV++ + +
Sbjct: 173 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 85/157 (54%), Gaps = 8/157 (5%)
Query: 17 EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHL--SKHTRTPLSWEK 74
E +E V+ + + +V ++G C + +LV E G L+++L ++H + +
Sbjct: 58 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD----KN 112
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSD-YSTET 133
+++ + G++YL E+N +HRD+ N+L+ + DFGL+K R D + Y +T
Sbjct: 113 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 172
Query: 134 GVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+ + APE + K S+K+DV+SFGV++ + +
Sbjct: 173 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 85/157 (54%), Gaps = 8/157 (5%)
Query: 17 EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHL--SKHTRTPLSWEK 74
E +E V+ + + +V ++G C + +LV E G L+++L ++H + +
Sbjct: 54 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD----KN 108
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSD-YSTET 133
+++ + G++YL E+N +HRD+ N+L+ + DFGL+K R D + Y +T
Sbjct: 109 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 168
Query: 134 GVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+ + APE + K S+K+DV+SFGV++ + +
Sbjct: 169 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 97/198 (48%), Gaps = 24/198 (12%)
Query: 30 HENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIALGAAKGLQYL 89
H ++V LLG C G+ LV +Y+ GSL H+ +H R L + + + AKG+ YL
Sbjct: 92 HAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQH-RGALGPQLLLNWGVQIAKGMYYL 149
Query: 90 HENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVEC 149
E+ ++HR++ N+L+ + + DFG+A D + + ++A E +
Sbjct: 150 EEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHF 209
Query: 150 GKLSTKTDVYSFGVVLLQLITGLKTNDKTLGEKGLVGWARPLLKERNYPDLID------- 202
GK + ++DV+S+GV + +L+ T G + G L+ PDL++
Sbjct: 210 GKYTHQSDVWSYGVTVWELM--------TFGAEPYAG-----LRLAEVPDLLEKGERLAQ 256
Query: 203 PRI--IDCYDVHQLFWMV 218
P+I ID Y V WM+
Sbjct: 257 PQICTIDVYMVMVKCWMI 274
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 85/157 (54%), Gaps = 8/157 (5%)
Query: 17 EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHL--SKHTRTPLSWEK 74
E +E V+ + + +V ++G C + +LV E G L+++L ++H + +
Sbjct: 416 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD----KN 470
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSD-YSTET 133
+++ + G++YL E+N +HRD+ N+L+ + DFGL+K R D + Y +T
Sbjct: 471 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 530
Query: 134 GVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+ + APE + K S+K+DV+SFGV++ + +
Sbjct: 531 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 72/152 (47%), Gaps = 2/152 (1%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIAL 80
E V+S+ H V L + D K Y NG L +++ K + + +
Sbjct: 79 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 138
Query: 81 GAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLG 140
+A L+YLH IIHRD+ P NIL+ D + DFG AK +S + VGT
Sbjct: 139 VSA--LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 196
Query: 141 YLAPEYVECGKLSTKTDVYSFGVVLLQLITGL 172
Y++PE + +D+++ G ++ QL+ GL
Sbjct: 197 YVSPELLTEKSACKSSDLWALGCIIYQLVAGL 228
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 72/152 (47%), Gaps = 2/152 (1%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIAL 80
E V+S+ H V L + D K Y NG L +++ K + + +
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 141
Query: 81 GAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLG 140
+A L+YLH IIHRD+ P NIL+ D + DFG AK +S + VGT
Sbjct: 142 VSA--LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 141 YLAPEYVECGKLSTKTDVYSFGVVLLQLITGL 172
Y++PE + +D+++ G ++ QL+ GL
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAGL 231
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 82/157 (52%), Gaps = 6/157 (3%)
Query: 18 FKSEVQVLSKARHENVVMLLGSC--SDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKR 75
F E ++ H NV+ L+G +G +L+ Y+C+G L Q + R P + +
Sbjct: 69 FLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL-PYMCHGDLLQFIRSPQRNP-TVKDL 126
Query: 76 MKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGV 135
+ L A+G++YL E +HRD+ N ++ F + DFGLA+ + YS +
Sbjct: 127 ISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHR 186
Query: 136 VGTL--GYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
L + A E ++ + +TK+DV+SFGV+L +L+T
Sbjct: 187 HARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 72/152 (47%), Gaps = 2/152 (1%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIAL 80
E V+S+ H V L + D K Y NG L +++ K + + +
Sbjct: 80 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 139
Query: 81 GAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLG 140
+A L+YLH IIHRD+ P NIL+ D + DFG AK +S + VGT
Sbjct: 140 VSA--LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 141 YLAPEYVECGKLSTKTDVYSFGVVLLQLITGL 172
Y++PE + +D+++ G ++ QL+ GL
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAGL 229
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 72/152 (47%), Gaps = 2/152 (1%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIAL 80
E V+S+ H V L + D K Y NG L +++ K + + +
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 141
Query: 81 GAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLG 140
+A L+YLH IIHRD+ P NIL+ D + DFG AK +S + VGT
Sbjct: 142 VSA--LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 141 YLAPEYVECGKLSTKTDVYSFGVVLLQLITGL 172
Y++PE + +D+++ G ++ QL+ GL
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAGL 231
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 72/152 (47%), Gaps = 2/152 (1%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIAL 80
E V+S+ H V L + D K Y NG L +++ K + + +
Sbjct: 64 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 123
Query: 81 GAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLG 140
+A L+YLH IIHRD+ P NIL+ D + DFG AK +S + VGT
Sbjct: 124 VSA--LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 181
Query: 141 YLAPEYVECGKLSTKTDVYSFGVVLLQLITGL 172
Y++PE + +D+++ G ++ QL+ GL
Sbjct: 182 YVSPELLTEKSACKSSDLWALGCIIYQLVAGL 213
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 72/152 (47%), Gaps = 2/152 (1%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIAL 80
E V+S+ H V L + D K Y NG L +++ K + + +
Sbjct: 85 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 144
Query: 81 GAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLG 140
+A L+YLH IIHRD+ P NIL+ D + DFG AK +S + VGT
Sbjct: 145 VSA--LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 202
Query: 141 YLAPEYVECGKLSTKTDVYSFGVVLLQLITGL 172
Y++PE + +D+++ G ++ QL+ GL
Sbjct: 203 YVSPELLTEKSACKSSDLWALGCIIYQLVAGL 234
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 72/152 (47%), Gaps = 2/152 (1%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIAL 80
E V+S+ H V L + D K Y NG L +++ K + + +
Sbjct: 83 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 142
Query: 81 GAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLG 140
+A L+YLH IIHRD+ P NIL+ D + DFG AK +S + VGT
Sbjct: 143 VSA--LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 200
Query: 141 YLAPEYVECGKLSTKTDVYSFGVVLLQLITGL 172
Y++PE + +D+++ G ++ QL+ GL
Sbjct: 201 YVSPELLTEKSACKSSDLWALGCIIYQLVAGL 232
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 85/157 (54%), Gaps = 8/157 (5%)
Query: 17 EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHL--SKHTRTPLSWEK 74
E +E V+ + + +V ++G C + +LV E G L+++L ++H + +
Sbjct: 52 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD----KN 106
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSD-YSTET 133
+++ + G++YL E+N +HRD+ N+L+ + DFGL+K R D + Y +T
Sbjct: 107 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 166
Query: 134 GVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+ + APE + K S+K+DV+SFGV++ + +
Sbjct: 167 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 72/152 (47%), Gaps = 2/152 (1%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIAL 80
E V+S+ H V L + D K Y NG L +++ K + + +
Sbjct: 80 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 139
Query: 81 GAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLG 140
+A L+YLH IIHRD+ P NIL+ D + DFG AK +S + VGT
Sbjct: 140 VSA--LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 141 YLAPEYVECGKLSTKTDVYSFGVVLLQLITGL 172
Y++PE + +D+++ G ++ QL+ GL
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAGL 229
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 97/198 (48%), Gaps = 24/198 (12%)
Query: 30 HENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIALGAAKGLQYL 89
H ++V LLG C G+ LV +Y+ GSL H+ +H R L + + + AKG+ YL
Sbjct: 74 HAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQH-RGALGPQLLLNWGVQIAKGMYYL 131
Query: 90 HENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVEC 149
E+ ++HR++ N+L+ + + DFG+A D + + ++A E +
Sbjct: 132 EEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHF 191
Query: 150 GKLSTKTDVYSFGVVLLQLITGLKTNDKTLGEKGLVGWARPLLKERNYPDLID------- 202
GK + ++DV+S+GV + +L+ T G + G L+ PDL++
Sbjct: 192 GKYTHQSDVWSYGVTVWELM--------TFGAEPYAG-----LRLAEVPDLLEKGERLAQ 238
Query: 203 PRI--IDCYDVHQLFWMV 218
P+I ID Y V WM+
Sbjct: 239 PQICTIDVYMVMVKCWMI 256
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 85/157 (54%), Gaps = 8/157 (5%)
Query: 17 EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHL--SKHTRTPLSWEK 74
E +E V+ + + +V ++G C + +LV E G L+++L ++H + +
Sbjct: 417 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD----KN 471
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSD-YSTET 133
+++ + G++YL E+N +HRD+ N+L+ + DFGL+K R D + Y +T
Sbjct: 472 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 531
Query: 134 GVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+ + APE + K S+K+DV+SFGV++ + +
Sbjct: 532 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 72/152 (47%), Gaps = 2/152 (1%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIAL 80
E V+S+ H V L + D K Y NG L +++ K + + +
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 141
Query: 81 GAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLG 140
+A L+YLH IIHRD+ P NIL+ D + DFG AK +S + VGT
Sbjct: 142 VSA--LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 141 YLAPEYVECGKLSTKTDVYSFGVVLLQLITGL 172
Y++PE + +D+++ G ++ QL+ GL
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAGL 231
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 84/160 (52%), Gaps = 12/160 (7%)
Query: 19 KSEVQVLSK-ARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMK 77
+ E +L + A H +++ L+ S + LV++ + G L +L++ + LS ++
Sbjct: 147 RRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTE--KVALSEKETRS 204
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
I + + +LH NNI+HRD+ P NIL+ + + L DFG + E + E + G
Sbjct: 205 IMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFS-CHLEPGEKLRE--LCG 261
Query: 138 TLGYLAPEYVECGKLST------KTDVYSFGVVLLQLITG 171
T GYLAPE ++C T + D+++ GV+L L+ G
Sbjct: 262 TPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 72/152 (47%), Gaps = 2/152 (1%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIAL 80
E V+S+ H V L + D K Y NG L +++ K + + +
Sbjct: 80 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 139
Query: 81 GAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLG 140
+A L+YLH IIHRD+ P NIL+ D + DFG AK +S + VGT
Sbjct: 140 VSA--LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 141 YLAPEYVECGKLSTKTDVYSFGVVLLQLITGL 172
Y++PE + +D+++ G ++ QL+ GL
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAGL 229
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 120/258 (46%), Gaps = 46/258 (17%)
Query: 2 IAVKQHKDASS-QGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K + + + + EF E +++ H ++V LLG C +L V + + +G L +
Sbjct: 70 VAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQL-VTQLMPHGCLLE 128
Query: 61 HLSKH-----TRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLG 115
++ +H ++ L+W + AKG+ YL E ++HRD+ N+LV +
Sbjct: 129 YVHEHKDNIGSQLLLNW------CVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKIT 182
Query: 116 DFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTN 175
DFGLA+ D G + ++A E + K + ++DV+S+GV + +L+
Sbjct: 183 DFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELM------ 236
Query: 176 DKTLGEKGLVGWARPLLKERNYPDLID-------PRI--IDCYDVHQLFWMV-------- 218
T G K G + R PDL++ P I ID Y V WM+
Sbjct: 237 --TFGGKPYDG-----IPTREIPDLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKF 289
Query: 219 -QIAKKC--LSKDPQKRL 233
++A + +++DPQ+ L
Sbjct: 290 KELAAEFSRMARDPQRYL 307
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 116/262 (44%), Gaps = 37/262 (14%)
Query: 1 MIAVKQHKDASSQGD-------REFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYV 53
++A+K S+G+ +EF+ EV ++S H N+V L G N +V E+V
Sbjct: 46 VVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMH--NPPRMVMEFV 103
Query: 54 CNGSLDQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENN--IIHRDMGPNNILVTHDFE 111
G L L P+ W ++++ L A G++Y+ N I+HRD+ NI + E
Sbjct: 104 PCGDLYHRLLDKAH-PIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDE 162
Query: 112 -----PMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYV--ECGKLSTKTDVYSFGVV 164
+ DFG ++ + +G++G ++APE + E + K D YSF ++
Sbjct: 163 NAPVCAKVADFGTSQ-----QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMI 217
Query: 165 LLQLITGLKTNDK-TLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKK 223
L ++TG D+ + G+ + R P+ PR+ + ++
Sbjct: 218 LYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIEL------------ 265
Query: 224 CLSKDPQKRLPMDTVVDALKSI 245
C S DP+KR +V L +
Sbjct: 266 CWSGDPKKRPHFSYIVKELSEL 287
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 73/155 (47%), Gaps = 3/155 (1%)
Query: 18 FKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMK 77
K E+ + HENVV G +GN + L EY G L + P +R
Sbjct: 51 IKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
L A G+ YLH I HRD+ P N+L+ + DFGLA R ++ + G
Sbjct: 111 HQLMA--GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 168
Query: 138 TLGYLAPEYVECGKLSTK-TDVYSFGVVLLQLITG 171
TL Y+APE ++ + + DV+S G+VL ++ G
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 80/155 (51%), Gaps = 3/155 (1%)
Query: 17 EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRM 76
+F E ++L + H N+V L+G C+ +V E V G L + L + +
Sbjct: 158 KFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL-RTEGARLRVKTLL 216
Query: 77 KIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVV 136
++ AA G++YL IHRD+ N LVT + DFG+++ + D Y+ G+
Sbjct: 217 QMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSR-EEADGVYAASGGLR 275
Query: 137 GT-LGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+ + APE + G+ S+++DV+SFG++L + +
Sbjct: 276 QVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 95/213 (44%), Gaps = 17/213 (7%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIAL 80
E V+S+ H V L + D K Y NG L +++ K + + +
Sbjct: 79 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 138
Query: 81 GAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLG 140
+A L+YLH IIHRD+ P NIL+ D + DFG AK +S + VGT
Sbjct: 139 VSA--LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 196
Query: 141 YLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTNDKTLGEKGLVGWARPLLKERNYPDL 200
Y++PE + +D+++ G ++ QL+ GL G + L+ + + + E ++P+
Sbjct: 197 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA--GNEYLI-FQKIIKLEYDFPEK 253
Query: 201 IDPRIIDCYDVHQLFWMVQIAKKCLSKDPQKRL 233
P+ D + +K L D KRL
Sbjct: 254 FFPKARD------------LVEKLLVLDATKRL 274
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 103/238 (43%), Gaps = 39/238 (16%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIAL 80
E+++L + RHEN+V LL C + LV+E+V + LD + L ++ K
Sbjct: 74 EIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDD--LELFPNGLDYQVVQKYLF 131
Query: 81 GAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSD-YSTETGVVGTL 139
G+ + H +NIIHRD+ P NILV+ L DFG A+T + Y E V T
Sbjct: 132 QIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDE---VATR 188
Query: 140 GYLAPEY-VECGKLSTKTDVYSFGVVLLQLITG----------------------LKTND 176
Y APE V K DV++ G ++ ++ G L
Sbjct: 189 WYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRH 248
Query: 177 KTLGEKG--LVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQKR 232
+ L K G P +KER + P++ + ++ +AKKCL DP KR
Sbjct: 249 QELFNKNPVFAGVRLPEIKEREPLERRYPKLSEV--------VIDLAKKCLHIDPDKR 298
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 73/155 (47%), Gaps = 3/155 (1%)
Query: 18 FKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMK 77
K E+ + HENVV G +GN + L EY G L + P +R
Sbjct: 52 IKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 111
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
L A G+ YLH I HRD+ P N+L+ + DFGLA R ++ + G
Sbjct: 112 HQLMA--GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXG 169
Query: 138 TLGYLAPEYVECGKLSTK-TDVYSFGVVLLQLITG 171
TL Y+APE ++ + + DV+S G+VL ++ G
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 73/155 (47%), Gaps = 3/155 (1%)
Query: 18 FKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMK 77
K E+ + HENVV G +GN + L EY G L + P +R
Sbjct: 51 IKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
L A G+ YLH I HRD+ P N+L+ + DFGLA R ++ + G
Sbjct: 111 HQLMA--GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXG 168
Query: 138 TLGYLAPEYVECGKLSTK-TDVYSFGVVLLQLITG 171
TL Y+APE ++ + + DV+S G+VL ++ G
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 116/262 (44%), Gaps = 37/262 (14%)
Query: 1 MIAVKQHKDASSQGD-------REFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYV 53
++A+K S+G+ +EF+ EV ++S H N+V L G N +V E+V
Sbjct: 46 VVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMH--NPPRMVMEFV 103
Query: 54 CNGSLDQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENN--IIHRDMGPNNILVTHDFE 111
G L L P+ W ++++ L A G++Y+ N I+HRD+ NI + E
Sbjct: 104 PCGDLYHRLLDKAH-PIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDE 162
Query: 112 -----PMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYV--ECGKLSTKTDVYSFGVV 164
+ DF L++ + +G++G ++APE + E + K D YSF ++
Sbjct: 163 NAPVCAKVADFSLSQ-----QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMI 217
Query: 165 LLQLITGLKTNDK-TLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKK 223
L ++TG D+ + G+ + R P+ PR+ + ++
Sbjct: 218 LYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIEL------------ 265
Query: 224 CLSKDPQKRLPMDTVVDALKSI 245
C S DP+KR +V L +
Sbjct: 266 CWSGDPKKRPHFSYIVKELSEL 287
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 74/155 (47%), Gaps = 3/155 (1%)
Query: 18 FKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMK 77
K E+ + + HENVV G +GN + L EY G L + P +R
Sbjct: 52 IKKEICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 111
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
L A G+ YLH I HRD+ P N+L+ + DFGLA R ++ + G
Sbjct: 112 HQLMA--GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 169
Query: 138 TLGYLAPEYVECGKLSTK-TDVYSFGVVLLQLITG 171
TL Y+APE ++ + + DV+S G+VL ++ G
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 109/242 (45%), Gaps = 30/242 (12%)
Query: 1 MIAVKQ-HKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSL- 58
++A+K K+A + ++E+ VL K +H N+V L G L+ + V G L
Sbjct: 45 LVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 59 DQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNIL---VTHDFEPMLG 115
D+ + K T + + L A K YLH+ I+HRD+ P N+L + D + M+
Sbjct: 105 DRIVEKGFYTERDASRLIFQVLDAVK---YLHDLGIVHRDLKPENLLYYSLDEDSKIMIS 161
Query: 116 DFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG---- 171
DFGL+K + S ST GT GY+APE + S D +S GV+ L+ G
Sbjct: 162 DFGLSKMEDPGSVLST---ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
Query: 172 LKTNDKTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQK 231
ND L E+ +LK D P D D + F + + KDP+K
Sbjct: 219 YDENDAKLFEQ--------ILKAEYEFD--SPYWDDISDSAKDF-----IRHLMEKDPEK 263
Query: 232 RL 233
R
Sbjct: 264 RF 265
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 71/152 (46%), Gaps = 2/152 (1%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIAL 80
E V+S+ H V L D K Y NG L +++ K + + +
Sbjct: 87 ERDVMSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 146
Query: 81 GAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLG 140
+A L+YLH IIHRD+ P NIL+ D + DFG AK +S + VGT
Sbjct: 147 VSA--LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 204
Query: 141 YLAPEYVECGKLSTKTDVYSFGVVLLQLITGL 172
Y++PE + +D+++ G ++ QL+ GL
Sbjct: 205 YVSPELLTEKSACKSSDLWALGCIIYQLVAGL 236
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 109/242 (45%), Gaps = 30/242 (12%)
Query: 1 MIAVKQ-HKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSL- 58
++A+K K+A + ++E+ VL K +H N+V L G L+ + V G L
Sbjct: 45 LVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 59 DQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNIL---VTHDFEPMLG 115
D+ + K T + + L A K YLH+ I+HRD+ P N+L + D + M+
Sbjct: 105 DRIVEKGFYTERDASRLIFQVLDAVK---YLHDLGIVHRDLKPENLLYYSLDEDSKIMIS 161
Query: 116 DFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG---- 171
DFGL+K + S ST GT GY+APE + S D +S GV+ L+ G
Sbjct: 162 DFGLSKMEDPGSVLST---ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
Query: 172 LKTNDKTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQK 231
ND L E+ +LK D P D D + F + + KDP+K
Sbjct: 219 YDENDAKLFEQ--------ILKAEYEFD--SPYWDDISDSAKDF-----IRHLMEKDPEK 263
Query: 232 RL 233
R
Sbjct: 264 RF 265
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 120/258 (46%), Gaps = 46/258 (17%)
Query: 2 IAVKQHKDASS-QGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K + + + + EF E +++ H ++V LLG C +L V + + +G L +
Sbjct: 47 VAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQL-VTQLMPHGCLLE 105
Query: 61 HLSKH-----TRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLG 115
++ +H ++ L+W + AKG+ YL E ++HRD+ N+LV +
Sbjct: 106 YVHEHKDNIGSQLLLNW------CVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKIT 159
Query: 116 DFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTN 175
DFGLA+ D G + ++A E + K + ++DV+S+GV + +L+
Sbjct: 160 DFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELM------ 213
Query: 176 DKTLGEKGLVGWARPLLKERNYPDLID-------PRI--IDCYDVHQLFWMV-------- 218
T G K G + R PDL++ P I ID Y V WM+
Sbjct: 214 --TFGGKPYDG-----IPTREIPDLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKF 266
Query: 219 -QIAKKC--LSKDPQKRL 233
++A + +++DPQ+ L
Sbjct: 267 KELAAEFSRMARDPQRYL 284
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 83/153 (54%), Gaps = 9/153 (5%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRM-KIA 79
E+QVL + +V G+ + + E++ GSLDQ L K R P E+ + K++
Sbjct: 57 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP---EQILGKVS 113
Query: 80 LGAAKGLQYLHENN-IIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
+ KGL YL E + I+HRD+ P+NILV E L DFG++ ++ VGT
Sbjct: 114 IAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDE----MANEFVGT 169
Query: 139 LGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
Y++PE ++ S ++D++S G+ L+++ G
Sbjct: 170 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 202
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 73/155 (47%), Gaps = 3/155 (1%)
Query: 18 FKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMK 77
K E+ + HENVV G +GN + L EY G L + P +R
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
L A G+ YLH I HRD+ P N+L+ + DFGLA R ++ + G
Sbjct: 111 HQLMA--GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 168
Query: 138 TLGYLAPEYVECGKLSTK-TDVYSFGVVLLQLITG 171
TL Y+APE ++ + + DV+S G+VL ++ G
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 93/193 (48%), Gaps = 15/193 (7%)
Query: 1 MIAVKQ-HKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSL- 58
++A+K K+A + ++E+ VL K +H N+V L G L+ + V G L
Sbjct: 45 LVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 59 DQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNIL---VTHDFEPMLG 115
D+ + K T + + L A K YLH+ I+HRD+ P N+L + D + M+
Sbjct: 105 DRIVEKGFYTERDASRLIFQVLDAVK---YLHDLGIVHRDLKPENLLYYSLDEDSKIMIS 161
Query: 116 DFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG---- 171
DFGL+K + S ST GT GY+APE + S D +S GV+ L+ G
Sbjct: 162 DFGLSKMEDPGSVLST---ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
Query: 172 LKTNDKTLGEKGL 184
ND L E+ L
Sbjct: 219 YDENDAKLFEQIL 231
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 73/155 (47%), Gaps = 3/155 (1%)
Query: 18 FKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMK 77
K E+ + HENVV G +GN + L EY G L + P +R
Sbjct: 50 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 109
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
L A G+ YLH I HRD+ P N+L+ + DFGLA R ++ + G
Sbjct: 110 HQLMA--GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 167
Query: 138 TLGYLAPEYVECGKLSTK-TDVYSFGVVLLQLITG 171
TL Y+APE ++ + + DV+S G+VL ++ G
Sbjct: 168 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 202
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 73/155 (47%), Gaps = 3/155 (1%)
Query: 18 FKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMK 77
K E+ + HENVV G +GN + L EY G L + P +R
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
L A G+ YLH I HRD+ P N+L+ + DFGLA R ++ + G
Sbjct: 111 HQLMA--GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 168
Query: 138 TLGYLAPEYVECGKLSTK-TDVYSFGVVLLQLITG 171
TL Y+APE ++ + + DV+S G+VL ++ G
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 73/155 (47%), Gaps = 3/155 (1%)
Query: 18 FKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMK 77
K E+ + HENVV G +GN + L EY G L + P +R
Sbjct: 52 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 111
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
L A G+ YLH I HRD+ P N+L+ + DFGLA R ++ + G
Sbjct: 112 HQLMA--GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 169
Query: 138 TLGYLAPEYVECGKLSTK-TDVYSFGVVLLQLITG 171
TL Y+APE ++ + + DV+S G+VL ++ G
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 73/155 (47%), Gaps = 3/155 (1%)
Query: 18 FKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMK 77
K E+ + HENVV G +GN + L EY G L + P +R
Sbjct: 52 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 111
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
L A G+ YLH I HRD+ P N+L+ + DFGLA R ++ + G
Sbjct: 112 HQLMA--GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 169
Query: 138 TLGYLAPEYVECGKLSTK-TDVYSFGVVLLQLITG 171
TL Y+APE ++ + + DV+S G+VL ++ G
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 73/155 (47%), Gaps = 3/155 (1%)
Query: 18 FKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMK 77
K E+ + HENVV G +GN + L EY G L + P +R
Sbjct: 52 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 111
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
L A G+ YLH I HRD+ P N+L+ + DFGLA R ++ + G
Sbjct: 112 HQLMA--GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 169
Query: 138 TLGYLAPEYVECGKLSTK-TDVYSFGVVLLQLITG 171
TL Y+APE ++ + + DV+S G+VL ++ G
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 73/155 (47%), Gaps = 3/155 (1%)
Query: 18 FKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMK 77
K E+ + HENVV G +GN + L EY G L + P +R
Sbjct: 52 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 111
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
L A G+ YLH I HRD+ P N+L+ + DFGLA R ++ + G
Sbjct: 112 HQLMA--GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 169
Query: 138 TLGYLAPEYVECGKLSTK-TDVYSFGVVLLQLITG 171
TL Y+APE ++ + + DV+S G+VL ++ G
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 73/155 (47%), Gaps = 3/155 (1%)
Query: 18 FKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMK 77
K E+ + HENVV G +GN + L EY G L + P +R
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
L A G+ YLH I HRD+ P N+L+ + DFGLA R ++ + G
Sbjct: 111 HQLMA--GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 168
Query: 138 TLGYLAPEYVECGKLSTK-TDVYSFGVVLLQLITG 171
TL Y+APE ++ + + DV+S G+VL ++ G
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 73/155 (47%), Gaps = 3/155 (1%)
Query: 18 FKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMK 77
K E+ + HENVV G +GN + L EY G L + P +R
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
L A G+ YLH I HRD+ P N+L+ + DFGLA R ++ + G
Sbjct: 111 HQLMA--GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 168
Query: 138 TLGYLAPEYVECGKLSTK-TDVYSFGVVLLQLITG 171
TL Y+APE ++ + + DV+S G+VL ++ G
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 73/155 (47%), Gaps = 3/155 (1%)
Query: 18 FKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMK 77
K E+ + HENVV G +GN + L EY G L + P +R
Sbjct: 52 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 111
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
L A G+ YLH I HRD+ P N+L+ + DFGLA R ++ + G
Sbjct: 112 HQLMA--GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 169
Query: 138 TLGYLAPEYVECGKLSTK-TDVYSFGVVLLQLITG 171
TL Y+APE ++ + + DV+S G+VL ++ G
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 73/155 (47%), Gaps = 3/155 (1%)
Query: 18 FKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMK 77
K E+ + HENVV G +GN + L EY G L + P +R
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
L A G+ YLH I HRD+ P N+L+ + DFGLA R ++ + G
Sbjct: 111 HQLMA--GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 168
Query: 138 TLGYLAPEYVECGKLSTK-TDVYSFGVVLLQLITG 171
TL Y+APE ++ + + DV+S G+VL ++ G
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 73/155 (47%), Gaps = 3/155 (1%)
Query: 18 FKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMK 77
K E+ + HENVV G +GN + L EY G L + P +R
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
L A G+ YLH I HRD+ P N+L+ + DFGLA R ++ + G
Sbjct: 111 HQLMA--GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXG 168
Query: 138 TLGYLAPEYVECGKLSTK-TDVYSFGVVLLQLITG 171
TL Y+APE ++ + + DV+S G+VL ++ G
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 99/227 (43%), Gaps = 28/227 (12%)
Query: 19 KSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKI 78
++EV++ + +H +++ L D N LV E NG ++++L + P S +
Sbjct: 59 QNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVK-PFSENEARHF 117
Query: 79 ALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
G+ YLH + I+HRD+ +N+L+T + + DFGLA + + + GT
Sbjct: 118 MHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLK--MPHEKHYTLCGT 175
Query: 139 LGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG-----LKTNDKTLGEKGLVGWARPLLK 193
Y++PE ++DV+S G + L+ G T TL + L + P
Sbjct: 176 PNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFL 235
Query: 194 ERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQKRLPMDTVVD 240
DLI HQL L ++P RL + +V+D
Sbjct: 236 SIEAKDLI----------HQL----------LRRNPADRLSLSSVLD 262
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 73/155 (47%), Gaps = 3/155 (1%)
Query: 18 FKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMK 77
K E+ + HENVV G +GN + L EY G L + P +R
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
L A G+ YLH I HRD+ P N+L+ + DFGLA R ++ + G
Sbjct: 111 HQLMA--GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXG 168
Query: 138 TLGYLAPEYVECGKLSTK-TDVYSFGVVLLQLITG 171
TL Y+APE ++ + + DV+S G+VL ++ G
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 73/155 (47%), Gaps = 3/155 (1%)
Query: 18 FKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMK 77
K E+ + HENVV G +GN + L EY G L + P +R
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
L A G+ YLH I HRD+ P N+L+ + DFGLA R ++ + G
Sbjct: 111 HQLMA--GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 168
Query: 138 TLGYLAPEYVECGKLSTK-TDVYSFGVVLLQLITG 171
TL Y+APE ++ + + DV+S G+VL ++ G
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 109/242 (45%), Gaps = 30/242 (12%)
Query: 1 MIAVKQHKDASSQG-DREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSL- 58
++A+K + +G + ++E+ VL K +H N+V L G L+ + V G L
Sbjct: 45 LVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 59 DQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNIL---VTHDFEPMLG 115
D+ + K T + + L A K YLH+ I+HRD+ P N+L + D + M+
Sbjct: 105 DRIVEKGFYTERDASRLIFQVLDAVK---YLHDLGIVHRDLKPENLLYYSLDEDSKIMIS 161
Query: 116 DFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG---- 171
DFGL+K + S ST GT GY+APE + S D +S GV+ L+ G
Sbjct: 162 DFGLSKMEDPGSVLST---ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
Query: 172 LKTNDKTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQK 231
ND L E+ +LK D P D D + F + + KDP+K
Sbjct: 219 YDENDAKLFEQ--------ILKAEYEFD--SPYWDDISDSAKDF-----IRHLMEKDPEK 263
Query: 232 RL 233
R
Sbjct: 264 RF 265
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 73/155 (47%), Gaps = 3/155 (1%)
Query: 18 FKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMK 77
K E+ + HENVV G +GN + L EY G L + P +R
Sbjct: 52 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 111
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
L A G+ YLH I HRD+ P N+L+ + DFGLA R ++ + G
Sbjct: 112 HQLMA--GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 169
Query: 138 TLGYLAPEYVECGKLSTK-TDVYSFGVVLLQLITG 171
TL Y+APE ++ + + DV+S G+VL ++ G
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 73/155 (47%), Gaps = 3/155 (1%)
Query: 18 FKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMK 77
K E+ + HENVV G +GN + L EY G L + P +R
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
L A G+ YLH I HRD+ P N+L+ + DFGLA R ++ + G
Sbjct: 111 HQLMA--GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 168
Query: 138 TLGYLAPEYVECGKLSTK-TDVYSFGVVLLQLITG 171
TL Y+APE ++ + + DV+S G+VL ++ G
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 114/248 (45%), Gaps = 23/248 (9%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
IA+K+ + S+ + E+ + +H+N+V LGS S+ + E V GSL
Sbjct: 36 IAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSA- 94
Query: 62 LSKHTRTPLSWEKRMKIALGAAK---GLQYLHENNIIHRDMGPNNILV-THDFEPMLGDF 117
L + PL + I + GL+YLH+N I+HRD+ +N+L+ T+ + DF
Sbjct: 95 LLRSKWGPLK-DNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDF 153
Query: 118 GLAKTQREDSDYSTETGVVGTLGYLAPEYVECG--KLSTKTDVYSFGVVLLQLITGLKTN 175
G +K + + TET GTL Y+APE ++ G D++S G ++++ TG K
Sbjct: 154 GTSK-RLAGINPCTET-FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATG-KPP 210
Query: 176 DKTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQKR-LP 234
LGE + + K + P I + +++ KC DP KR
Sbjct: 211 FYELGEPQAAMFKVGMFK-------VHPEIPESMSAEAKAFIL----KCFEPDPDKRACA 259
Query: 235 MDTVVDAL 242
D +VD
Sbjct: 260 NDLLVDEF 267
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 73/155 (47%), Gaps = 3/155 (1%)
Query: 18 FKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMK 77
K E+ + HENVV G +GN + L EY G L + P +R
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
L A G+ YLH I HRD+ P N+L+ + DFGLA R ++ + G
Sbjct: 111 HQLMA--GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXG 168
Query: 138 TLGYLAPEYVECGKLSTK-TDVYSFGVVLLQLITG 171
TL Y+APE ++ + + DV+S G+VL ++ G
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 87/171 (50%), Gaps = 7/171 (4%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+A++Q +E+ V+ + ++ N+V L S G++ +V EY+ GSL
Sbjct: 49 VAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV 108
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGL-A 120
+ T T + + + + L++LH N +IHR++ +NIL+ D L DFG A
Sbjct: 109 V---TETCMDEGQIAAVCRECLQALEFLHSNQVIHRNIKSDNILLGMDGSVKLTDFGFCA 165
Query: 121 KTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
+ E S ST +VGT ++APE V K D++S G++ +++I G
Sbjct: 166 QITPEQSKRST---MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 213
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 78/154 (50%), Gaps = 9/154 (5%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIAL 80
EV++L K H N++ L D + +V E G L + K R S +I
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR--FSEHDAARIIK 128
Query: 81 GAAKGLQYLHENNIIHRDMGPNNILV---THDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
G+ Y+H++NI+HRD+ P NIL+ D + + DFGL+ ++++ +G
Sbjct: 129 QVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR---IG 185
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T Y+APE + G K DV+S GV+L L++G
Sbjct: 186 TAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSG 218
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 11/134 (8%)
Query: 76 MKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSD------- 128
+ I + A+ +++LH ++HRD+ P+NI T D +GDFGL +D +
Sbjct: 167 LHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTP 226
Query: 129 ---YSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTN-DKTLGEKGL 184
Y+T G VGT Y++PE + S K D++S G++L +L+ T ++ +
Sbjct: 227 MPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRIITDV 286
Query: 185 VGWARPLLKERNYP 198
PLL + YP
Sbjct: 287 RNLKFPLLFTQKYP 300
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 13/169 (7%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+AVK K S + F +E V+ +H+ +V L + ++ E++ GSL
Sbjct: 209 VAVKTMKPGSMSVE-AFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDF 266
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
L + K + + A+G+ ++ + N IHRD+ NILV+ + DFGLA+
Sbjct: 267 LKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLAR 326
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
G + + APE + G + K+DV+SFG++L++++T
Sbjct: 327 -----------VGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 364
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 114/248 (45%), Gaps = 23/248 (9%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
IA+K+ + S+ + E+ + +H+N+V LGS S+ + E V GSL
Sbjct: 50 IAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSA- 108
Query: 62 LSKHTRTPLSWEKRMKIALGAAK---GLQYLHENNIIHRDMGPNNILV-THDFEPMLGDF 117
L + PL + I + GL+YLH+N I+HRD+ +N+L+ T+ + DF
Sbjct: 109 LLRSKWGPLK-DNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDF 167
Query: 118 GLAKTQREDSDYSTETGVVGTLGYLAPEYVECG--KLSTKTDVYSFGVVLLQLITGLKTN 175
G +K + + TET GTL Y+APE ++ G D++S G ++++ TG K
Sbjct: 168 GTSK-RLAGINPCTET-FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATG-KPP 224
Query: 176 DKTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQKR-LP 234
LGE + + K + P I + +++ KC DP KR
Sbjct: 225 FYELGEPQAAMFKVGMFK-------VHPEIPESMSAEAKAFIL----KCFEPDPDKRACA 273
Query: 235 MDTVVDAL 242
D +VD
Sbjct: 274 NDLLVDEF 281
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 78/154 (50%), Gaps = 9/154 (5%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIAL 80
EV++L K H N++ L D + +V E G L + K R S +I
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR--FSEHDAARIIK 128
Query: 81 GAAKGLQYLHENNIIHRDMGPNNILV---THDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
G+ Y+H++NI+HRD+ P NIL+ D + + DFGL+ ++++ +G
Sbjct: 129 QVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR---IG 185
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T Y+APE + G K DV+S GV+L L++G
Sbjct: 186 TAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSG 218
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 86/171 (50%), Gaps = 7/171 (4%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+A++Q +E+ V+ + ++ N+V L S G++ +V EY+ GSL
Sbjct: 49 VAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV 108
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGL-A 120
+ T T + + + + L++LH N +IHRD+ +NIL+ D L DFG A
Sbjct: 109 V---TETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCA 165
Query: 121 KTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
+ E S S +VGT ++APE V K D++S G++ +++I G
Sbjct: 166 QITPEQSKRSX---MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 213
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 86/171 (50%), Gaps = 7/171 (4%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+A++Q +E+ V+ + ++ N+V L S G++ +V EY+ GSL
Sbjct: 48 VAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV 107
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGL-A 120
+ T T + + + + L++LH N +IHRD+ +NIL+ D L DFG A
Sbjct: 108 V---TETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCA 164
Query: 121 KTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
+ E S S +VGT ++APE V K D++S G++ +++I G
Sbjct: 165 QITPEQSKRSX---MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 212
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 111/253 (43%), Gaps = 31/253 (12%)
Query: 9 DASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLD---QHLSKH 65
DA ++ D E+ +L + H NV+ S + N+ +V E G L +H K
Sbjct: 72 DAKARAD--CIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQ 129
Query: 66 TRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQRE 125
R + K + L+++H ++HRD+ P N+ +T LGD GL +
Sbjct: 130 KRL-IPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRF--F 186
Query: 126 DSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT------GLKTNDKTL 179
S + +VGT Y++PE + + K+D++S G +L ++ G K N +L
Sbjct: 187 SSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSL 246
Query: 180 GEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQKRLPMDTVV 239
+K +++ +YP L H + Q+ C++ DP+KR + V
Sbjct: 247 CKK---------IEQCDYPPLPSD--------HYSEELRQLVNMCINPDPEKRPDVTYVY 289
Query: 240 DALKSIMEGTATS 252
D K + TA+S
Sbjct: 290 DVAKRMHACTASS 302
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 86/171 (50%), Gaps = 7/171 (4%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+A++Q +E+ V+ + ++ N+V L S G++ +V EY+ GSL
Sbjct: 48 VAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV 107
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGL-A 120
+ T T + + + + L++LH N +IHRD+ +NIL+ D L DFG A
Sbjct: 108 V---TETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCA 164
Query: 121 KTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
+ E S S +VGT ++APE V K D++S G++ +++I G
Sbjct: 165 QITPEQSKRSE---MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 212
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 78/154 (50%), Gaps = 9/154 (5%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIAL 80
EV++L K H N++ L D + +V E G L + K R S +I
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR--FSEHDAARIIK 128
Query: 81 GAAKGLQYLHENNIIHRDMGPNNILV---THDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
G+ Y+H++NI+HRD+ P NIL+ D + + DFGL+ ++++ +G
Sbjct: 129 QVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR---IG 185
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T Y+APE + G K DV+S GV+L L++G
Sbjct: 186 TAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSG 218
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 88/171 (51%), Gaps = 7/171 (4%)
Query: 2 IAVKQHKDASSQGDREFK-SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+AVK D Q RE +EV ++ +H NVV + S G + ++ E++ G+L
Sbjct: 73 VAVKMM-DLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTD 131
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLA 120
+S+ L+ E+ + + L YLH +IHRD+ ++IL+T D L DFG
Sbjct: 132 IVSQ---VRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFC 188
Query: 121 KTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
+ D +VGT ++APE + +T+ D++S G+++++++ G
Sbjct: 189 A--QISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDG 237
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 10/110 (9%)
Query: 76 MKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSD------- 128
+ I L A+ +++LH ++HRD+ P+NI T D +GDFGL +D +
Sbjct: 121 LHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTP 180
Query: 129 ---YSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTN 175
Y+ TG VGT Y++PE + S K D++S G++L +L+ T
Sbjct: 181 MPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLYPFSTQ 230
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 94/214 (43%), Gaps = 19/214 (8%)
Query: 19 KSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKI 78
+ E+ VLS+ V GS G+K ++ EY+ GS L +K
Sbjct: 69 QQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKE 128
Query: 79 ALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
L KGL YLH IHRD+ N+L++ + L DFG+A Q D+ T VGT
Sbjct: 129 IL---KGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVA-GQLTDTQIKRNT-FVGT 183
Query: 139 LGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTNDKTLGEKGLVGWARPLLKERNYP 198
++APE ++ +K D++S G+ ++L G N + L L+ + N P
Sbjct: 184 PFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLF-----LIPKNNPP 238
Query: 199 DLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQKR 232
L+ D + F + CL+KDP R
Sbjct: 239 TLVG-------DFTKSF--KEFIDACLNKDPSFR 263
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 17/162 (10%)
Query: 17 EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRM 76
+F E ++L + H N+V L+G C+ +V E V G L + L + +
Sbjct: 158 KFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL-RTEGARLRVKTLL 216
Query: 77 KIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVV 136
++ AA G++YL IHRD+ N LVT + DFG++ RE++D GV
Sbjct: 217 QMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMS---REEAD-----GVX 268
Query: 137 GTLG--------YLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
G + APE + G+ S+++DV+SFG++L + +
Sbjct: 269 AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 7/148 (4%)
Query: 24 VLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIALGAA 83
+LS H ++ + G+ D + ++ +Y+ G L L K R P K A
Sbjct: 59 MLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFY--AAEVC 116
Query: 84 KGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLA 143
L+YLH +II+RD+ P NIL+ + + DFG AK D Y + GT Y+A
Sbjct: 117 LALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYV-PDVTYX----LCGTPDYIA 171
Query: 144 PEYVECGKLSTKTDVYSFGVVLLQLITG 171
PE V + D +SFG+++ +++ G
Sbjct: 172 PEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 15 DREFKSEVQVLSK-ARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWE 73
++ SE VL K +H +V L S +K V +Y+ G L HL + R L
Sbjct: 82 EKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRE-RCFLEPR 140
Query: 74 KRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTET 133
R A A L YLH NI++RD+ P NIL+ +L DFGL K E + ST +
Sbjct: 141 ARF-YAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN--STTS 197
Query: 134 GVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGL 172
GT YLAPE + D + G VL +++ GL
Sbjct: 198 TFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGL 236
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 114/251 (45%), Gaps = 36/251 (14%)
Query: 17 EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRM 76
E + EV +L + RH N++ L + +L+ E V G L L++ + L+ ++
Sbjct: 54 EIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAE--KESLTEDEAT 111
Query: 77 KIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEP----MLGDFGLAKTQREDSDYSTE 132
+ G+ YLH I H D+ P NI++ P L DFG+A +++
Sbjct: 112 QFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN- 170
Query: 133 TGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTNDKTLGEKGLVGWARPLL 192
+ GT ++APE V L + D++S GV+ L++G A P L
Sbjct: 171 --IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG----------------ASPFL 212
Query: 193 KERNYPDLIDPRIIDCYDVHQLFW--MVQIAK----KCLSKDPQKRLPMDTVVDALK-SI 245
E L + ++ YD + ++ ++AK + L KDP++R+ T+ +L+ S
Sbjct: 213 GETKQETLTNISAVN-YDFDEEYFSNTSELAKDFIRRLLVKDPKRRM---TIAQSLEHSW 268
Query: 246 MEGTATSNIRG 256
++ N+RG
Sbjct: 269 IKAIRRRNVRG 279
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 88/183 (48%), Gaps = 11/183 (6%)
Query: 2 IAVKQHKDASSQGDRE-FKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K K+ +S RE F E + + H ++V L+G ++ N ++ E G L
Sbjct: 41 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRS 99
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLA 120
L + L + A + L YL +HRD+ N+LV+ + LGDFGL+
Sbjct: 100 FLQVR-KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 158
Query: 121 KTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT-------GLK 173
+ + + Y G + + ++APE + + ++ +DV+ FGV + +++ G+K
Sbjct: 159 RYMEDSTYYKASKGKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 217
Query: 174 TND 176
ND
Sbjct: 218 NND 220
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 78/156 (50%), Gaps = 10/156 (6%)
Query: 19 KSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKI 78
K E +L+ H VV L + K L+ +++ G L LSK + E+ +K
Sbjct: 78 KMERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV---MFTEEDVKF 134
Query: 79 ALGA-AKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK--TQREDSDYSTETGV 135
L A GL +LH II+RD+ P NIL+ + L DFGL+K E YS
Sbjct: 135 YLAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS----F 190
Query: 136 VGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
GT+ Y+APE V S D +S+GV++ +++TG
Sbjct: 191 CGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 12/157 (7%)
Query: 19 KSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKH----TRTPLSWEK 74
K+E +L + +H +V L+ + G K L+ EY+ G L L + T +
Sbjct: 69 KAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLA 128
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
+ +ALG +LH+ II+RD+ P NI++ H L DFGL K D +
Sbjct: 129 EISMALG------HLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDG--TVTHX 180
Query: 135 VVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
GT+ Y+APE + + D +S G ++ ++TG
Sbjct: 181 FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 73/153 (47%), Gaps = 15/153 (9%)
Query: 25 LSKARHENVVMLLGSCSDGN-----KRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIA 79
L H NVV L+ C+ K LV+E+V + L +L K L E +
Sbjct: 68 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLM 126
Query: 80 LGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTE---TGVV 136
+GL +LH N I+HRD+ P NILVT L DFGLA+ YS + T VV
Sbjct: 127 RQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARI------YSYQMALTPVV 180
Query: 137 GTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLI 169
TL Y APE + +T D++S G + ++
Sbjct: 181 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 88/183 (48%), Gaps = 11/183 (6%)
Query: 2 IAVKQHKDASSQGDRE-FKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K K+ +S RE F E + + H ++V L+G ++ N ++ E G L
Sbjct: 41 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRS 99
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLA 120
L + L + A + L YL +HRD+ N+LV+ + LGDFGL+
Sbjct: 100 FLQVR-KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 158
Query: 121 KTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT-------GLK 173
+ + + Y G + + ++APE + + ++ +DV+ FGV + +++ G+K
Sbjct: 159 RYMEDSTYYKASKGKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 217
Query: 174 TND 176
ND
Sbjct: 218 NND 220
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 88/183 (48%), Gaps = 11/183 (6%)
Query: 2 IAVKQHKDASSQGDRE-FKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K K+ +S RE F E + + H ++V L+G ++ N ++ E G L
Sbjct: 69 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRS 127
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLA 120
L + L + A + L YL +HRD+ N+LV+ + LGDFGL+
Sbjct: 128 FLQVR-KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 186
Query: 121 KTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT-------GLK 173
+ + + Y G + + ++APE + + ++ +DV+ FGV + +++ G+K
Sbjct: 187 RYMEDSTYYKASKGKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 245
Query: 174 TND 176
ND
Sbjct: 246 NND 248
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 117/273 (42%), Gaps = 42/273 (15%)
Query: 5 KQHKDASSQG--DREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHL 62
K+ AS +G E + EV +L + H NV+ L + +L+ E V G L L
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 63 SKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPM----LGDFG 118
++ + LS E+ G+ YLH I H D+ P NI++ P+ L DFG
Sbjct: 107 AQ--KESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164
Query: 119 LAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTNDKT 178
LA + ++ + GT ++APE V L + D++S GV+ L++G
Sbjct: 165 LAHEIEDGVEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------- 214
Query: 179 LGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFW--MVQIAK----KCLSKDPQKR 232
A P L + L + + YD + F+ ++AK K L K+ +KR
Sbjct: 215 ---------ASPFLGDTKQETLANITAV-SYDFDEEFFSQTSELAKDFIRKLLVKETRKR 264
Query: 233 L--------PMDTVVDALKSIMEGTATSNIRGF 257
L P T VD ++++ + N+ F
Sbjct: 265 LTIQEALRHPWITPVDNQQAMVRRESVVNLENF 297
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 12/157 (7%)
Query: 19 KSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKH----TRTPLSWEK 74
K+E +L + +H +V L+ + G K L+ EY+ G L L + T +
Sbjct: 69 KAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLA 128
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
+ +ALG +LH+ II+RD+ P NI++ H L DFGL K D +
Sbjct: 129 EISMALG------HLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDG--TVTHT 180
Query: 135 VVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
GT+ Y+APE + + D +S G ++ ++TG
Sbjct: 181 FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 117/273 (42%), Gaps = 42/273 (15%)
Query: 5 KQHKDASSQG--DREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHL 62
K+ AS +G E + EV +L + H NV+ L + +L+ E V G L L
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 63 SKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPM----LGDFG 118
++ + LS E+ G+ YLH I H D+ P NI++ P+ L DFG
Sbjct: 107 AQ--KESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164
Query: 119 LAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTNDKT 178
LA + ++ + GT ++APE V L + D++S GV+ L++G
Sbjct: 165 LAHEIEDGVEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------- 214
Query: 179 LGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFW--MVQIAK----KCLSKDPQKR 232
A P L + L + + YD + F+ ++AK K L K+ +KR
Sbjct: 215 ---------ASPFLGDTKQETLANITAV-SYDFDEEFFSQTSELAKDFIRKLLVKETRKR 264
Query: 233 L--------PMDTVVDALKSIMEGTATSNIRGF 257
L P T VD ++++ + N+ F
Sbjct: 265 LTIQEALRHPWITPVDNQQAMVRRESVVNLENF 297
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 88/183 (48%), Gaps = 11/183 (6%)
Query: 2 IAVKQHKDASSQGDRE-FKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K K+ +S RE F E + + H ++V L+G ++ N ++ E G L
Sbjct: 46 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRS 104
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLA 120
L + L + A + L YL +HRD+ N+LV+ + LGDFGL+
Sbjct: 105 FLQVR-KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 163
Query: 121 KTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT-------GLK 173
+ + + Y G + + ++APE + + ++ +DV+ FGV + +++ G+K
Sbjct: 164 RYMEDSTYYKASKGKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 222
Query: 174 TND 176
ND
Sbjct: 223 NND 225
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 100/229 (43%), Gaps = 40/229 (17%)
Query: 21 EVQVLSKARHENVVMLLGSCSDG----------------NKRLLVYEYVCN-GSLDQHLS 63
EV+ L+K H N+V G C DG K L + C+ G+L+Q +
Sbjct: 54 EVKALAKLDHVNIVHYNG-CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIE 112
Query: 64 KHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQ 123
K L +++ KG+ Y+H +I+RD+ P+NI + + +GDFGL +
Sbjct: 113 KRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSL 172
Query: 124 REDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTNDKTLGEKG 183
+ D GTL Y++PE + + D+Y+ G++L +L+ T +T
Sbjct: 173 KNDGKRXRSK---GTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET----- 224
Query: 184 LVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQKR 232
+ + DL D I D +D + + +K LSK P+ R
Sbjct: 225 ----------SKFFTDLRDGIISDIFDKKE----KTLLQKLLSKKPEDR 259
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 88/183 (48%), Gaps = 11/183 (6%)
Query: 2 IAVKQHKDASSQGDRE-FKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K K+ +S RE F E + + H ++V L+G ++ N ++ E G L
Sbjct: 38 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRS 96
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLA 120
L + L + A + L YL +HRD+ N+LV+ + LGDFGL+
Sbjct: 97 FLQVR-KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 155
Query: 121 KTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT-------GLK 173
+ + + Y G + + ++APE + + ++ +DV+ FGV + +++ G+K
Sbjct: 156 RYMEDSTYYKASKGKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 214
Query: 174 TND 176
ND
Sbjct: 215 NND 217
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 88/183 (48%), Gaps = 11/183 (6%)
Query: 2 IAVKQHKDASSQGDRE-FKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K K+ +S RE F E + + H ++V L+G ++ N ++ E G L
Sbjct: 43 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRS 101
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLA 120
L + L + A + L YL +HRD+ N+LV+ + LGDFGL+
Sbjct: 102 FLQVR-KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 160
Query: 121 KTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT-------GLK 173
+ + + Y G + + ++APE + + ++ +DV+ FGV + +++ G+K
Sbjct: 161 RYMEDSTYYKASKGKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 219
Query: 174 TND 176
ND
Sbjct: 220 NND 222
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 75/157 (47%), Gaps = 16/157 (10%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKH------TRTPLSWEK 74
E+ +L + H N+V LL NK LV+E+ L Q L K T PL K
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK 106
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
L +GL + H + ++HRD+ P N+L+ + L DFGLA+ T T
Sbjct: 107 SYLFQL--LQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTH 162
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLIT 170
V TL Y APE + C ST D++S G + +++T
Sbjct: 163 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 75/153 (49%), Gaps = 15/153 (9%)
Query: 25 LSKARHENVVMLLGSCS----DGNKRL-LVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIA 79
L H NVV L C+ D +L LV+E+V + L +L K + E +
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMM 126
Query: 80 LGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTE---TGVV 136
+GL +LH + ++HRD+ P NILVT + L DFGLA+ YS + T VV
Sbjct: 127 FQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARI------YSFQMALTSVV 180
Query: 137 GTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLI 169
TL Y APE + +T D++S G + ++
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 75/157 (47%), Gaps = 16/157 (10%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKH------TRTPLSWEK 74
E+ +L + H N+V LL NK LV+E+ L Q L K T PL K
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK 106
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
L +GL + H + ++HRD+ P N+L+ + L DFGLA+ T T
Sbjct: 107 SYLFQL--LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTH 162
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLIT 170
V TL Y APE + C ST D++S G + +++T
Sbjct: 163 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 75/157 (47%), Gaps = 16/157 (10%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKH------TRTPLSWEK 74
E+ +L + H N+V LL NK LV+E+ L Q L K T PL K
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK 105
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
L +GL + H + ++HRD+ P N+L+ + L DFGLA+ T T
Sbjct: 106 SYLFQL--LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTH 161
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLIT 170
V TL Y APE + C ST D++S G + +++T
Sbjct: 162 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 75/157 (47%), Gaps = 16/157 (10%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKH------TRTPLSWEK 74
E+ +L + H N+V LL NK LV+E+ L Q L K T PL K
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK 105
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
L +GL + H + ++HRD+ P N+L+ + L DFGLA+ T T
Sbjct: 106 SYLFQL--LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTH 161
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLIT 170
V TL Y APE + C ST D++S G + +++T
Sbjct: 162 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 88/183 (48%), Gaps = 11/183 (6%)
Query: 2 IAVKQHKDASSQGDRE-FKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K K+ +S RE F E + + H ++V L+G ++ N ++ E G L
Sbjct: 44 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRS 102
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLA 120
L + L + A + L YL +HRD+ N+LV+ + LGDFGL+
Sbjct: 103 FLQVR-KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 161
Query: 121 KTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT-------GLK 173
+ + + Y G + + ++APE + + ++ +DV+ FGV + +++ G+K
Sbjct: 162 RYMEDSTYYKASKGKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 220
Query: 174 TND 176
ND
Sbjct: 221 NND 223
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 75/153 (49%), Gaps = 15/153 (9%)
Query: 25 LSKARHENVVMLLGSCS----DGNKRL-LVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIA 79
L H NVV L C+ D +L LV+E+V + L +L K + E +
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMM 126
Query: 80 LGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTE---TGVV 136
+GL +LH + ++HRD+ P NILVT + L DFGLA+ YS + T VV
Sbjct: 127 FQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARI------YSFQMALTSVV 180
Query: 137 GTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLI 169
TL Y APE + +T D++S G + ++
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 75/157 (47%), Gaps = 16/157 (10%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKH------TRTPLSWEK 74
E+ +L + H N+V LL NK LV+E+V DQ L K T PL K
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEHV-----DQDLKKFMDASALTGIPLPLIK 109
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
L +GL + H + ++HRD+ P N+L+ + L DFGLA+ T
Sbjct: 110 SYLFQL--LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXH 165
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLIT 170
V TL Y APE + C ST D++S G + +++T
Sbjct: 166 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 110/224 (49%), Gaps = 27/224 (12%)
Query: 21 EVQVLSKA-RHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIA 79
EVQ+L ++ H NV+ + D + + E +C +L +++ + L E + +
Sbjct: 67 EVQLLRESDEHPNVIRYFCTEKDRQFQYIAIE-LCAATLQEYVEQKDFAHLGLEP-ITLL 124
Query: 80 LGAAKGLQYLHENNIIHRDMGPNNILVTH-----DFEPMLGDFGLAKT-QREDSDYSTET 133
GL +LH NI+HRD+ P+NIL++ + M+ DFGL K +S +
Sbjct: 125 QQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRS 184
Query: 134 GVVGTLGYLAPEYV--ECGKLSTKT-DVYSFGVVLLQLITGLKTNDKTLGEKGLVGWARP 190
GV GT G++APE + +C + T T D++S G V +I+ +G + +
Sbjct: 185 GVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVIS-----------EGSHPFGKS 233
Query: 191 LLKERNYPDLIDPRIIDCY--DVHQLFWMVQIAKKCLSKDPQKR 232
L ++ N L+ +DC + H+ ++ +K ++ DPQKR
Sbjct: 234 LQRQANI--LLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKR 275
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 75/157 (47%), Gaps = 16/157 (10%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKH------TRTPLSWEK 74
E+ +L + H N+V LL NK LV+E+ L Q L K T PL K
Sbjct: 59 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK 113
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
L +GL + H + ++HRD+ P N+L+ + L DFGLA+ T T
Sbjct: 114 SYLFQL--LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTH 169
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLIT 170
V TL Y APE + C ST D++S G + +++T
Sbjct: 170 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 206
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 75/157 (47%), Gaps = 16/157 (10%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKH------TRTPLSWEK 74
E+ +L + H N+V LL NK LV+E+ L Q L K T PL K
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK 106
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
L +GL + H + ++HRD+ P N+L+ + L DFGLA+ T T
Sbjct: 107 SYLFQL--LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTH 162
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLIT 170
V TL Y APE + C ST D++S G + +++T
Sbjct: 163 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 77/153 (50%), Gaps = 8/153 (5%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHL--SKHTRTPLSWEKRMKI 78
E+ +L + H N+V LL NK LV+E++ + L + + S T PL K
Sbjct: 56 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 114
Query: 79 ALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
L +GL + H + ++HRD+ P N+L+ + L DFGLA+ T T V T
Sbjct: 115 QL--LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 170
Query: 139 LGYLAPE-YVECGKLSTKTDVYSFGVVLLQLIT 170
L Y APE + C ST D++S G + +++T
Sbjct: 171 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 75/157 (47%), Gaps = 16/157 (10%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKH------TRTPLSWEK 74
E+ +L + H N+V LL NK LV+E+ L Q L K T PL K
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK 105
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
L +GL + H + ++HRD+ P N+L+ + L DFGLA+ T T
Sbjct: 106 SYLFQL--LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTH 161
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLIT 170
V TL Y APE + C ST D++S G + +++T
Sbjct: 162 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 75/153 (49%), Gaps = 15/153 (9%)
Query: 25 LSKARHENVVMLLGSCS----DGNKRL-LVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIA 79
L H NVV L C+ D +L LV+E+V + L +L K + E +
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMM 126
Query: 80 LGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTE---TGVV 136
+GL +LH + ++HRD+ P NILVT + L DFGLA+ YS + T VV
Sbjct: 127 FQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARI------YSFQMALTSVV 180
Query: 137 GTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLI 169
TL Y APE + +T D++S G + ++
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 75/157 (47%), Gaps = 16/157 (10%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKH------TRTPLSWEK 74
E+ +L + H N+V LL NK LV+E+ L Q L K T PL K
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK 106
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
L +GL + H + ++HRD+ P N+L+ + L DFGLA+ T T
Sbjct: 107 SYLFQL--LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTH 162
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLIT 170
V TL Y APE + C ST D++S G + +++T
Sbjct: 163 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 87/185 (47%), Gaps = 14/185 (7%)
Query: 8 KDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSL-DQHLSKHT 66
K A + ++E+ VL K +HEN+V L N LV + V G L D+ + K
Sbjct: 57 KKALKGKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGF 116
Query: 67 RTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNIL-VTHDFEP--MLGDFGLAKTQ 123
T ++ L A + YLH I+HRD+ P N+L + D E M+ DFGL+K +
Sbjct: 117 YTEKDASTLIRQVLDA---VYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKME 173
Query: 124 REDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG----LKTNDKTL 179
+ ST GT GY+APE + S D +S GV+ L+ G ND L
Sbjct: 174 GKGDVMST---ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKL 230
Query: 180 GEKGL 184
E+ L
Sbjct: 231 FEQIL 235
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 117/273 (42%), Gaps = 42/273 (15%)
Query: 5 KQHKDASSQG--DREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHL 62
K+ AS +G E + EV +L + H NV+ L + +L+ E V G L L
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 63 SKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPM----LGDFG 118
++ + LS E+ G+ YLH I H D+ P NI++ P+ L DFG
Sbjct: 107 AQ--KESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164
Query: 119 LAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTNDKT 178
LA + ++ + GT ++APE V L + D++S GV+ L++G
Sbjct: 165 LAHEIEDGVEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------- 214
Query: 179 LGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFW--MVQIAK----KCLSKDPQKR 232
A P L + L + + YD + F+ ++AK K L K+ +KR
Sbjct: 215 ---------ASPFLGDTKQETLANITSV-SYDFDEEFFSHTSELAKDFIRKLLVKETRKR 264
Query: 233 L--------PMDTVVDALKSIMEGTATSNIRGF 257
L P T VD ++++ + N+ F
Sbjct: 265 LTIQEALRHPWITPVDNQQAMVRRESVVNLENF 297
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 75/157 (47%), Gaps = 16/157 (10%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKH------TRTPLSWEK 74
E+ +L + H N+V LL NK LV+E+ L Q L K T PL K
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK 107
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
L +GL + H + ++HRD+ P N+L+ + L DFGLA+ T T
Sbjct: 108 SYLFQL--LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTH 163
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLIT 170
V TL Y APE + C ST D++S G + +++T
Sbjct: 164 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 117/273 (42%), Gaps = 42/273 (15%)
Query: 5 KQHKDASSQG--DREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHL 62
K+ AS +G E + EV +L + H NV+ L + +L+ E V G L L
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 63 SKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPM----LGDFG 118
++ + LS E+ G+ YLH I H D+ P NI++ P+ L DFG
Sbjct: 107 AQ--KESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164
Query: 119 LAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTNDKT 178
LA + ++ + GT ++APE V L + D++S GV+ L++G
Sbjct: 165 LAHEIEDGVEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------- 214
Query: 179 LGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFW--MVQIAK----KCLSKDPQKR 232
A P L + L + + YD + F+ ++AK K L K+ +KR
Sbjct: 215 ---------ASPFLGDTKQETLANITSV-SYDFDEEFFSHTSELAKDFIRKLLVKETRKR 264
Query: 233 L--------PMDTVVDALKSIMEGTATSNIRGF 257
L P T VD ++++ + N+ F
Sbjct: 265 LTIQEALRHPWITPVDNQQAMVRRESVVNLENF 297
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 76/153 (49%), Gaps = 8/153 (5%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHL--SKHTRTPLSWEKRMKI 78
E+ +L + H N+V LL NK LV+E+V + L + S T PL K
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLF 109
Query: 79 ALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
L +GL + H + ++HRD+ P N+L+ + L DFGLA+ T T V T
Sbjct: 110 QL--LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 165
Query: 139 LGYLAPE-YVECGKLSTKTDVYSFGVVLLQLIT 170
L Y APE + C ST D++S G + +++T
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 87/183 (47%), Gaps = 11/183 (6%)
Query: 2 IAVKQHKDASSQGDRE-FKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K K+ +S RE F E + + H ++V L+G ++ N ++ E G L
Sbjct: 41 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRS 99
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLA 120
L + L + A + L YL +HRD+ N+LV+ LGDFGL+
Sbjct: 100 FLQVR-KFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLS 158
Query: 121 KTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT-------GLK 173
+ + + Y G + + ++APE + + ++ +DV+ FGV + +++ G+K
Sbjct: 159 RYMEDSTYYKASKGKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 217
Query: 174 TND 176
ND
Sbjct: 218 NND 220
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 79/157 (50%), Gaps = 8/157 (5%)
Query: 17 EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRM 76
+ K E+Q L RH +++ L S +V EYV G L ++ KH R +R+
Sbjct: 57 KIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRL 116
Query: 77 KIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVV 136
+ +A + Y H + ++HRD+ P N+L+ + DFGL+ D ++ ++
Sbjct: 117 FQQILSA--VDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM-SDGEFLRDS--C 171
Query: 137 GTLGYLAPEYVECGKLST--KTDVYSFGVVLLQLITG 171
G+ Y APE + G+L + D++S GV+L L+ G
Sbjct: 172 GSPNYAAPEVIS-GRLYAGPEVDIWSCGVILYALLCG 207
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 112/250 (44%), Gaps = 34/250 (13%)
Query: 17 EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRM 76
E + EV +L + RH N++ L + +L+ E V G L L++ + L+ ++
Sbjct: 75 EIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAE--KESLTEDEAT 132
Query: 77 KIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEP----MLGDFGLAKTQREDSDYSTE 132
+ G+ YLH I H D+ P NI++ P L DFG+A +++
Sbjct: 133 QFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN- 191
Query: 133 TGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTNDKTLGEKGLVGWARPLL 192
+ GT ++APE V L + D++S GV+ L++G A P L
Sbjct: 192 --IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG----------------ASPFL 233
Query: 193 KERNYPDLIDPRIIDCYDVHQLFW--MVQIAK----KCLSKDPQKRLPMDTVVDALKSIM 246
E L + ++ YD + ++ ++AK + L KDP++R+ + ++ S +
Sbjct: 234 GETKQETLTNISAVN-YDFDEEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLE--HSWI 290
Query: 247 EGTATSNIRG 256
+ N+RG
Sbjct: 291 KAIRRRNVRG 300
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 8/157 (5%)
Query: 17 EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRM 76
+ K E+Q L RH +++ L S +V EYV G L ++ KH R +R+
Sbjct: 57 KIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRL 116
Query: 77 KIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVV 136
+ +A + Y H + ++HRD+ P N+L+ + DFGL+ + T
Sbjct: 117 FQQILSA--VDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC--- 171
Query: 137 GTLGYLAPEYVECGKLST--KTDVYSFGVVLLQLITG 171
G+ Y APE + G+L + D++S GV+L L+ G
Sbjct: 172 GSPNYAAPEVIS-GRLYAGPEVDIWSCGVILYALLCG 207
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 101/242 (41%), Gaps = 53/242 (21%)
Query: 21 EVQVLSKARHENVVMLLGSCSDG-----------------------------NKRLLVYE 51
EV+ L+K H N+V G C DG K L +
Sbjct: 55 EVKALAKLDHVNIVHYNG-CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQM 113
Query: 52 YVCN-GSLDQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDF 110
C+ G+L+Q + K L +++ KG+ Y+H +IHRD+ P+NI +
Sbjct: 114 EFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTK 173
Query: 111 EPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+ +GDFGL + + D T GTL Y++PE + + D+Y+ G++L +L+
Sbjct: 174 QVKIGDFGLVTSLKND---GKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLH 230
Query: 171 GLKTNDKTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQ 230
T +T + + DL D I D +D + + +K LSK P+
Sbjct: 231 VCDTAFET---------------SKFFTDLRDGIISDIFDKKE----KTLLQKLLSKKPE 271
Query: 231 KR 232
R
Sbjct: 272 DR 273
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 117/273 (42%), Gaps = 42/273 (15%)
Query: 5 KQHKDASSQG--DREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHL 62
K+ AS +G E + EV +L + H N++ L + +L+ E V G L L
Sbjct: 47 KRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 63 SKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPM----LGDFG 118
++ + LS E+ G+ YLH I H D+ P NI++ P+ L DFG
Sbjct: 107 AQ--KESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164
Query: 119 LAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTNDKT 178
LA + ++ + GT ++APE V L + D++S GV+ L++G
Sbjct: 165 LAHEIEDGVEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------- 214
Query: 179 LGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFW--MVQIAK----KCLSKDPQKR 232
A P L + L + + YD + F+ ++AK K L K+ +KR
Sbjct: 215 ---------ASPFLGDTKQETLANITAV-SYDFDEEFFSQTSELAKDFIRKLLVKETRKR 264
Query: 233 L--------PMDTVVDALKSIMEGTATSNIRGF 257
L P T VD ++++ + N+ F
Sbjct: 265 LTIQEALRHPWITPVDTQQAMVRRESVVNLENF 297
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 89/186 (47%), Gaps = 4/186 (2%)
Query: 2 IAVKQ-HKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+AVK KD + +F SE ++ H ++V L+G + ++ E G L
Sbjct: 39 VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELYPYGELGH 97
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLA 120
+L ++ + L + +L K + YL N +HRD+ NILV LGDFGL+
Sbjct: 98 YLERN-KNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLS 156
Query: 121 KTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTNDKTLG 180
+ ED DY + + +++PE + + +T +DV+ F V + ++++ K L
Sbjct: 157 R-YIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLE 215
Query: 181 EKGLVG 186
K ++G
Sbjct: 216 NKDVIG 221
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 89/186 (47%), Gaps = 4/186 (2%)
Query: 2 IAVKQ-HKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+AVK KD + +F SE ++ H ++V L+G + ++ E G L
Sbjct: 55 VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELYPYGELGH 113
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLA 120
+L ++ + L + +L K + YL N +HRD+ NILV LGDFGL+
Sbjct: 114 YLERN-KNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLS 172
Query: 121 KTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTNDKTLG 180
+ ED DY + + +++PE + + +T +DV+ F V + ++++ K L
Sbjct: 173 RYI-EDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLE 231
Query: 181 EKGLVG 186
K ++G
Sbjct: 232 NKDVIG 237
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 72/153 (47%), Gaps = 15/153 (9%)
Query: 25 LSKARHENVVMLLGSCSDGN-----KRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIA 79
L H NVV L+ C+ K LV+E+V + L +L K L E +
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLM 118
Query: 80 LGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG---VV 136
+GL +LH N I+HRD+ P NILVT L DFGLA+ YS + VV
Sbjct: 119 RQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARI------YSYQMALDPVV 172
Query: 137 GTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLI 169
TL Y APE + +T D++S G + ++
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 72/153 (47%), Gaps = 15/153 (9%)
Query: 25 LSKARHENVVMLLGSCSDGN-----KRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIA 79
L H NVV L+ C+ K LV+E+V + L +L K L E +
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLM 118
Query: 80 LGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG---VV 136
+GL +LH N I+HRD+ P NILVT L DFGLA+ YS + VV
Sbjct: 119 RQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARI------YSYQMALAPVV 172
Query: 137 GTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLI 169
TL Y APE + +T D++S G + ++
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 71/152 (46%), Gaps = 6/152 (3%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIAL 80
E+ + H++VV G D + +V E SL L H R E + L
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSL---LELHKRRKALTEPEARYYL 123
Query: 81 -GAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTL 139
G QYLH N +IHRD+ N+ + D E +GDFGLA + + D + + GT
Sbjct: 124 RQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLA--TKVEYDGERKKTLCGTP 181
Query: 140 GYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
Y+APE + S + DV+S G ++ L+ G
Sbjct: 182 NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG 213
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 71/152 (46%), Gaps = 6/152 (3%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIAL 80
E+ + H++VV G D + +V E SL L H R E + L
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSL---LELHKRRKALTEPEARYYL 123
Query: 81 -GAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTL 139
G QYLH N +IHRD+ N+ + D E +GDFGLA + + D + + GT
Sbjct: 124 RQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLA--TKVEYDGERKKTLCGTP 181
Query: 140 GYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
Y+APE + S + DV+S G ++ L+ G
Sbjct: 182 NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG 213
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 89/186 (47%), Gaps = 4/186 (2%)
Query: 2 IAVKQ-HKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+AVK KD + +F SE ++ H ++V L+G + ++ E G L
Sbjct: 43 VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELYPYGELGH 101
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLA 120
+L ++ + L + +L K + YL N +HRD+ NILV LGDFGL+
Sbjct: 102 YLERN-KNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLS 160
Query: 121 KTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTNDKTLG 180
+ ED DY + + +++PE + + +T +DV+ F V + ++++ K L
Sbjct: 161 RYI-EDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLE 219
Query: 181 EKGLVG 186
K ++G
Sbjct: 220 NKDVIG 225
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 72/153 (47%), Gaps = 15/153 (9%)
Query: 25 LSKARHENVVMLLGSCSDGN-----KRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIA 79
L H NVV L+ C+ K LV+E+V + L +L K L E +
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLM 118
Query: 80 LGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG---VV 136
+GL +LH N I+HRD+ P NILVT L DFGLA+ YS + VV
Sbjct: 119 RQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARI------YSYQMALFPVV 172
Query: 137 GTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLI 169
TL Y APE + +T D++S G + ++
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 71/152 (46%), Gaps = 6/152 (3%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIAL 80
E+ + H++VV G D + +V E SL L H R E + L
Sbjct: 71 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSL---LELHKRRKALTEPEARYYL 127
Query: 81 -GAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTL 139
G QYLH N +IHRD+ N+ + D E +GDFGLA + + D + + GT
Sbjct: 128 RQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLA--TKVEYDGERKKTLCGTP 185
Query: 140 GYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
Y+APE + S + DV+S G ++ L+ G
Sbjct: 186 NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG 217
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 73/152 (48%), Gaps = 6/152 (3%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLD-QHLSKHTRTPLSWEKRMKIA 79
E+ +L + H N+V LL NK LV+E++ D S T PL K
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQ 114
Query: 80 LGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTL 139
L +GL + H + ++HRD+ P N+L+ + L DFGLA+ T V TL
Sbjct: 115 L--LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTL 170
Query: 140 GYLAPE-YVECGKLSTKTDVYSFGVVLLQLIT 170
Y APE + C ST D++S G + +++T
Sbjct: 171 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 92/192 (47%), Gaps = 27/192 (14%)
Query: 13 QGDREFKSEVQVLSK--ARHENVVMLLGSCSDGN----KRLLVYEYVCNGSLDQHLSKHT 66
Q + ++SE ++ S +HEN++ + + G+ + L+ + GSL +L +
Sbjct: 49 QDKQSWQSEREIFSTPGMKHENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLKGNI 108
Query: 67 RTPLSWEKRMKIALGAAKGLQYLHEN-----------NIIHRDMGPNNILVTHDFEPMLG 115
++W + +A ++GL YLHE+ +I HRD N+L+ D +L
Sbjct: 109 ---ITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLA 165
Query: 116 DFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLS------TKTDVYSFGVVLLQLI 169
DFGLA G VGT Y+APE +E G ++ + D+Y+ G+VL +L+
Sbjct: 166 DFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLE-GAINFQRDAFLRIDMYAMGLVLWELV 224
Query: 170 TGLKTNDKTLGE 181
+ K D + E
Sbjct: 225 SRCKAADGPVDE 236
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 88/183 (48%), Gaps = 11/183 (6%)
Query: 2 IAVKQHKDASSQGDRE-FKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K K+ +S RE F E + + H ++V L+G ++ N ++ E G L
Sbjct: 421 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRS 479
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLA 120
L + L + A + L YL +HRD+ N+LV+ + LGDFGL+
Sbjct: 480 FLQVR-KFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 538
Query: 121 KTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT-------GLK 173
+ + + Y G + + ++APE + + ++ +DV+ FGV + +++ G+K
Sbjct: 539 RYMEDSTYYKASKGKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 597
Query: 174 TND 176
ND
Sbjct: 598 NND 600
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 122/242 (50%), Gaps = 14/242 (5%)
Query: 2 IAVKQHKDASS-QGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K+ ++A+S + ++E E V++ + +V LLG C +L++ + + G L
Sbjct: 51 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLD 109
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLA 120
++ +H + + + + + AKG+ YL + ++HRD+ N+LV + DFGLA
Sbjct: 110 YVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 168
Query: 121 K-TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT-GLKTND-- 176
K E+ +Y E G V + ++A E + + ++DV+S+GV + +L+T G K D
Sbjct: 169 KLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 227
Query: 177 -----KTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQK 231
++ EKG P+ Y ++ +ID D F + I +++DPQ+
Sbjct: 228 PASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDA-DSRPKFRELIIEFSKMARDPQR 286
Query: 232 RL 233
L
Sbjct: 287 YL 288
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 73/152 (48%), Gaps = 6/152 (3%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLD-QHLSKHTRTPLSWEKRMKIA 79
E+ +L + H N+V LL NK LV+E++ D S T PL K
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQ 113
Query: 80 LGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTL 139
L +GL + H + ++HRD+ P N+L+ + L DFGLA+ T V TL
Sbjct: 114 L--LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTL 169
Query: 140 GYLAPE-YVECGKLSTKTDVYSFGVVLLQLIT 170
Y APE + C ST D++S G + +++T
Sbjct: 170 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 73/152 (48%), Gaps = 6/152 (3%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLD-QHLSKHTRTPLSWEKRMKIA 79
E+ +L + H N+V LL NK LV+E++ D S T PL K
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQ 111
Query: 80 LGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTL 139
L +GL + H + ++HRD+ P N+L+ + L DFGLA+ T V TL
Sbjct: 112 L--LQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTL 167
Query: 140 GYLAPE-YVECGKLSTKTDVYSFGVVLLQLIT 170
Y APE + C ST D++S G + +++T
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 122/242 (50%), Gaps = 14/242 (5%)
Query: 2 IAVKQHKDASS-QGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K+ ++A+S + ++E E V++ + +V LLG C +L++ + + G L
Sbjct: 48 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGXLLD 106
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLA 120
++ +H + + + + + AKG+ YL + ++HRD+ N+LV + DFGLA
Sbjct: 107 YVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 165
Query: 121 K-TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT-GLKTND-- 176
K E+ +Y E G V + ++A E + + ++DV+S+GV + +L+T G K D
Sbjct: 166 KLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 224
Query: 177 -----KTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQK 231
++ EKG P+ Y ++ +ID D F + I +++DPQ+
Sbjct: 225 PASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDA-DSRPKFRELIIEFSKMARDPQR 283
Query: 232 RL 233
L
Sbjct: 284 YL 285
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 111/251 (44%), Gaps = 37/251 (14%)
Query: 5 KQHKDASSQG--DREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHL 62
K+ AS +G E + EV +L + H NV+ L + +L+ E V G L L
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 63 SKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPM----LGDFG 118
++ + LS E+ G+ YLH I H D+ P NI++ P+ L DFG
Sbjct: 107 AQ--KESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164
Query: 119 LAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTNDKT 178
LA + ++ + GT ++APE V L + D++S GV+ L++G
Sbjct: 165 LAHEIEDGVEFKN---IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------- 214
Query: 179 LGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFW--MVQIAK----KCLSKDPQKR 232
A P L + L + + YD + F+ ++AK K L K+ +KR
Sbjct: 215 ---------ASPFLGDTKQETLANITSV-SYDFDEEFFSHTSELAKDFIRKLLVKETRKR 264
Query: 233 LPMDTVVDALK 243
L T+ +AL+
Sbjct: 265 L---TIQEALR 272
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 122/242 (50%), Gaps = 14/242 (5%)
Query: 2 IAVKQHKDASS-QGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K+ ++A+S + ++E E V++ + +V LLG C +L++ + + G L
Sbjct: 50 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLD 108
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLA 120
++ +H + + + + + AKG+ YL + ++HRD+ N+LV + DFGLA
Sbjct: 109 YVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 167
Query: 121 K-TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT-GLKTND-- 176
K E+ +Y E G V + ++A E + + ++DV+S+GV + +L+T G K D
Sbjct: 168 KLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 226
Query: 177 -----KTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQK 231
++ EKG P+ Y ++ +ID D F + I +++DPQ+
Sbjct: 227 PASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDA-DSRPKFRELIIEFSKMARDPQR 285
Query: 232 RL 233
L
Sbjct: 286 YL 287
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 122/242 (50%), Gaps = 14/242 (5%)
Query: 2 IAVKQHKDASS-QGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K+ ++A+S + ++E E V++ + +V LLG C +L++ + + G L
Sbjct: 54 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLD 112
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLA 120
++ +H + + + + + AKG+ YL + ++HRD+ N+LV + DFGLA
Sbjct: 113 YVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 171
Query: 121 K-TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT-GLKTND-- 176
K E+ +Y E G V + ++A E + + ++DV+S+GV + +L+T G K D
Sbjct: 172 KLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 230
Query: 177 -----KTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQK 231
++ EKG P+ Y ++ +ID D F + I +++DPQ+
Sbjct: 231 PASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDA-DSRPKFRELIIEFSKMARDPQR 289
Query: 232 RL 233
L
Sbjct: 290 YL 291
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 122/242 (50%), Gaps = 14/242 (5%)
Query: 2 IAVKQHKDASS-QGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K+ ++A+S + ++E E V++ + +V LLG C +L++ + + G L
Sbjct: 48 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLD 106
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLA 120
++ +H + + + + + AKG+ YL + ++HRD+ N+LV + DFGLA
Sbjct: 107 YVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 165
Query: 121 K-TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT-GLKTND-- 176
K E+ +Y E G V + ++A E + + ++DV+S+GV + +L+T G K D
Sbjct: 166 KLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 224
Query: 177 -----KTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQK 231
++ EKG P+ Y ++ +ID D F + I +++DPQ+
Sbjct: 225 PASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDA-DSRPKFRELIIEFSKMARDPQR 283
Query: 232 RL 233
L
Sbjct: 284 YL 285
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 71/152 (46%), Gaps = 6/152 (3%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIAL 80
E+ + H++VV G D + +V E SL L H R E + L
Sbjct: 89 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSL---LELHKRRKALTEPEARYYL 145
Query: 81 -GAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTL 139
G QYLH N +IHRD+ N+ + D E +GDFGLA + + D + + GT
Sbjct: 146 RQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLA--TKVEYDGERKKVLCGTP 203
Query: 140 GYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
Y+APE + S + DV+S G ++ L+ G
Sbjct: 204 NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG 235
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 122/242 (50%), Gaps = 14/242 (5%)
Query: 2 IAVKQHKDASS-QGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K+ ++A+S + ++E E V++ + +V LLG C +L++ + + G L
Sbjct: 49 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLD 107
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLA 120
++ +H + + + + + AKG+ YL + ++HRD+ N+LV + DFGLA
Sbjct: 108 YVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 166
Query: 121 K-TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT-GLKTND-- 176
K E+ +Y E G V + ++A E + + ++DV+S+GV + +L+T G K D
Sbjct: 167 KLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 225
Query: 177 -----KTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQK 231
++ EKG P+ Y ++ +ID D F + I +++DPQ+
Sbjct: 226 PASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDA-DSRPKFRELIIEFSKMARDPQR 284
Query: 232 RL 233
L
Sbjct: 285 YL 286
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 71/152 (46%), Gaps = 6/152 (3%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIAL 80
E+ + H++VV G D + +V E SL L H R E + L
Sbjct: 65 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSL---LELHKRRKALTEPEARYYL 121
Query: 81 -GAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTL 139
G QYLH N +IHRD+ N+ + D E +GDFGLA + + D + + GT
Sbjct: 122 RQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLA--TKVEYDGERKKVLCGTP 179
Query: 140 GYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
Y+APE + S + DV+S G ++ L+ G
Sbjct: 180 NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG 211
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 122/242 (50%), Gaps = 14/242 (5%)
Query: 2 IAVKQHKDASS-QGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K+ ++A+S + ++E E V++ + +V LLG C +L++ + + G L
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLD 105
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLA 120
++ +H + + + + + AKG+ YL + ++HRD+ N+LV + DFGLA
Sbjct: 106 YVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
Query: 121 K-TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT-GLKTND-- 176
K E+ +Y E G V + ++A E + + ++DV+S+GV + +L+T G K D
Sbjct: 165 KLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
Query: 177 -----KTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQK 231
++ EKG P+ Y ++ +ID D F + I +++DPQ+
Sbjct: 224 PASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDA-DSRPKFRELIIEFSKMARDPQR 282
Query: 232 RL 233
L
Sbjct: 283 YL 284
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 71/152 (46%), Gaps = 6/152 (3%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIAL 80
E+ + H++VV G D + +V E SL L H R E + L
Sbjct: 91 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSL---LELHKRRKALTEPEARYYL 147
Query: 81 -GAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTL 139
G QYLH N +IHRD+ N+ + D E +GDFGLA + + D + + GT
Sbjct: 148 RQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLA--TKVEYDGERKKVLCGTP 205
Query: 140 GYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
Y+APE + S + DV+S G ++ L+ G
Sbjct: 206 NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG 237
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 121/242 (50%), Gaps = 14/242 (5%)
Query: 2 IAVKQHKDASS-QGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K+ ++A+S + ++E E V++ + +V LLG C +L+ + + G L
Sbjct: 72 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 130
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLA 120
++ +H + + + + + AKG+ YL + ++HRD+ N+LV + DFGLA
Sbjct: 131 YVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 189
Query: 121 K-TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT-GLKTND-- 176
K E+ +Y E G V + ++A E + + ++DV+S+GV + +L+T G K D
Sbjct: 190 KLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 248
Query: 177 -----KTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQK 231
++ EKG P+ Y ++ +ID D F + I +++DPQ+
Sbjct: 249 PASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDA-DSRPKFRELIIEFSKMARDPQR 307
Query: 232 RL 233
L
Sbjct: 308 YL 309
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 104/227 (45%), Gaps = 17/227 (7%)
Query: 17 EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGS-LD--QHL---SKHTRTPL 70
E E+Q +S+ H N+V S ++ LV + + GS LD +H+ +H L
Sbjct: 54 ELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVL 113
Query: 71 SWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYS 130
I +GL+YLH+N IHRD+ NIL+ D + DFG++ D +
Sbjct: 114 DESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDIT 173
Query: 131 ---TETGVVGTLGYLAPEYVECGK-LSTKTDVYSFGVVLLQLITGLKTNDKTLGEKGLVG 186
VGT ++APE +E + K D++SFG+ ++L TG K K L
Sbjct: 174 RNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVL-- 231
Query: 187 WARPLLKERNYPDLIDPRIIDCYDVHQLFWMV-QIAKKCLSKDPQKR 232
+L +N P ++ + D + + ++ CL KDP+KR
Sbjct: 232 ----MLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKR 274
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 121/242 (50%), Gaps = 14/242 (5%)
Query: 2 IAVKQHKDASS-QGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K+ ++A+S + ++E E V++ + +V LLG C +L+ + + G L
Sbjct: 54 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 112
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLA 120
++ +H + + + + + AKG+ YL + ++HRD+ N+LV + DFGLA
Sbjct: 113 YVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 171
Query: 121 K-TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT-GLKTND-- 176
K E+ +Y E G V + ++A E + + ++DV+S+GV + +L+T G K D
Sbjct: 172 KLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 230
Query: 177 -----KTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQK 231
++ EKG P+ Y ++ +ID D F + I +++DPQ+
Sbjct: 231 PASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDA-DSRPKFRELIIEFSKMARDPQR 289
Query: 232 RL 233
L
Sbjct: 290 YL 291
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 121/242 (50%), Gaps = 14/242 (5%)
Query: 2 IAVKQHKDASS-QGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K+ ++A+S + ++E E V++ + +V LLG C +L+ + + G L
Sbjct: 54 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 112
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLA 120
++ +H + + + + + AKG+ YL + ++HRD+ N+LV + DFGLA
Sbjct: 113 YVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 171
Query: 121 K-TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT-GLKTND-- 176
K E+ +Y E G V + ++A E + + ++DV+S+GV + +L+T G K D
Sbjct: 172 KLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 230
Query: 177 -----KTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQK 231
++ EKG P+ Y ++ +ID D F + I +++DPQ+
Sbjct: 231 PASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDA-DSRPKFRELIIEFSKMARDPQR 289
Query: 232 RL 233
L
Sbjct: 290 YL 291
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 77/156 (49%), Gaps = 10/156 (6%)
Query: 19 KSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKI 78
K E +L + H +V L + K L+ +++ G L LSK + E+ +K
Sbjct: 74 KMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV---MFTEEDVKF 130
Query: 79 ALGA-AKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQ--REDSDYSTETGV 135
L A L +LH II+RD+ P NIL+ + L DFGL+K E YS
Sbjct: 131 YLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS----F 186
Query: 136 VGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
GT+ Y+APE V + D +SFGV++ +++TG
Sbjct: 187 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 106/251 (42%), Gaps = 42/251 (16%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNK----RLLVYEYVCNGSLDQHLSKHTRTPLSWEKRM 76
EV L +HEN++ +G+ G L+ + GSL L + +SW +
Sbjct: 68 EVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANV---VSWNELC 124
Query: 77 KIALGAAKGLQYLHEN----------NIIHRDMGPNNILVTHDFEPMLGDFGLAKTQRED 126
IA A+GL YLHE+ I HRD+ N+L+ ++ + DFGLA
Sbjct: 125 HIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAG 184
Query: 127 SDYSTETGVVGTLGYLAPEYVECGKLS------TKTDVYSFGVVLLQLITGLKTNDKTLG 180
G VGT Y+APE +E G ++ + D+Y+ G+VL +L + D +
Sbjct: 185 KSAGDTHGQVGTRRYMAPEVLE-GAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVD 243
Query: 181 EKGLVGWARPLLKE-RNYPDLID-----------PRIIDCYDVHQLFWMV-QIAKKCLSK 227
E L P +E +P L D P + D + H M+ + ++C
Sbjct: 244 EYML-----PFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDH 298
Query: 228 DPQKRLPMDTV 238
D + RL V
Sbjct: 299 DAEARLSAGCV 309
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 77/153 (50%), Gaps = 7/153 (4%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYE-YVCNGSLDQHLSKHTRTPLSWEKRMKIA 79
E+ +L +HENV+ LL + + Y+ Y+ + L K S EK +
Sbjct: 73 ELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLV 132
Query: 80 LGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTL 139
KGL+Y+H ++HRD+ P N+ V D E + DFGLA+ D++ TG V T
Sbjct: 133 YQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLAR--HADAEM---TGYVVTR 187
Query: 140 GYLAPEYVECGKLSTKT-DVYSFGVVLLQLITG 171
Y APE + +T D++S G ++ +++TG
Sbjct: 188 WYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTG 220
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 77/153 (50%), Gaps = 7/153 (4%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYE-YVCNGSLDQHLSKHTRTPLSWEKRMKIA 79
E+ +L +HENV+ LL + + Y+ Y+ + L K S EK +
Sbjct: 91 ELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLV 150
Query: 80 LGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTL 139
KGL+Y+H ++HRD+ P N+ V D E + DFGLA+ D++ TG V T
Sbjct: 151 YQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLAR--HADAEM---TGYVVTR 205
Query: 140 GYLAPEYVECGKLSTKT-DVYSFGVVLLQLITG 171
Y APE + +T D++S G ++ +++TG
Sbjct: 206 WYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTG 238
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 121/242 (50%), Gaps = 14/242 (5%)
Query: 2 IAVKQHKDASS-QGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K+ ++A+S + ++E E V++ + +V LLG C +L+ + + G L
Sbjct: 53 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 111
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLA 120
++ +H + + + + + AKG+ YL + ++HRD+ N+LV + DFGLA
Sbjct: 112 YVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 170
Query: 121 K-TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT-GLKTND-- 176
K E+ +Y E G V + ++A E + + ++DV+S+GV + +L+T G K D
Sbjct: 171 KLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 229
Query: 177 -----KTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQK 231
++ EKG P+ Y ++ +ID D F + I +++DPQ+
Sbjct: 230 PASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDA-DSRPKFRELIIEFSKMARDPQR 288
Query: 232 RL 233
L
Sbjct: 289 YL 290
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 121/242 (50%), Gaps = 14/242 (5%)
Query: 2 IAVKQHKDASS-QGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K+ ++A+S + ++E E V++ + +V LLG C +L+ + + G L
Sbjct: 41 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 99
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLA 120
++ +H + + + + + AKG+ YL + ++HRD+ N+LV + DFGLA
Sbjct: 100 YVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 158
Query: 121 K-TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT-GLKTND-- 176
K E+ +Y E G V + ++A E + + ++DV+S+GV + +L+T G K D
Sbjct: 159 KLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 217
Query: 177 -----KTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQK 231
++ EKG P+ Y ++ +ID D F + I +++DPQ+
Sbjct: 218 PASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDA-DSRPKFRELIIEFSKMARDPQR 276
Query: 232 RL 233
L
Sbjct: 277 YL 278
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 121/242 (50%), Gaps = 14/242 (5%)
Query: 2 IAVKQHKDASS-QGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K+ ++A+S + ++E E V++ + +V LLG C +L+ + + G L
Sbjct: 50 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 108
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLA 120
++ +H + + + + + AKG+ YL + ++HRD+ N+LV + DFGLA
Sbjct: 109 YVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 167
Query: 121 K-TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT-GLKTND-- 176
K E+ +Y E G V + ++A E + + ++DV+S+GV + +L+T G K D
Sbjct: 168 KLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 226
Query: 177 -----KTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQK 231
++ EKG P+ Y ++ +ID D F + I +++DPQ+
Sbjct: 227 PASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDA-DSRPKFRELIIEFSKMARDPQR 285
Query: 232 RL 233
L
Sbjct: 286 YL 287
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 121/242 (50%), Gaps = 14/242 (5%)
Query: 2 IAVKQHKDASS-QGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K+ ++A+S + ++E E V++ + +V LLG C +L+ + + G L
Sbjct: 49 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 107
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLA 120
++ +H + + + + + AKG+ YL + ++HRD+ N+LV + DFGLA
Sbjct: 108 YVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 166
Query: 121 K-TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT-GLKTND-- 176
K E+ +Y E G V + ++A E + + ++DV+S+GV + +L+T G K D
Sbjct: 167 KLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 225
Query: 177 -----KTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQK 231
++ EKG P+ Y ++ +ID D F + I +++DPQ+
Sbjct: 226 PASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDA-DSRPKFRELIIEFSKMARDPQR 284
Query: 232 RL 233
L
Sbjct: 285 YL 286
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 121/242 (50%), Gaps = 14/242 (5%)
Query: 2 IAVKQHKDASS-QGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K+ ++A+S + ++E E V++ + +V LLG C +L+ + + G L
Sbjct: 50 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 108
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLA 120
++ +H + + + + + AKG+ YL + ++HRD+ N+LV + DFGLA
Sbjct: 109 YVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 167
Query: 121 K-TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT-GLKTND-- 176
K E+ +Y E G V + ++A E + + ++DV+S+GV + +L+T G K D
Sbjct: 168 KLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 226
Query: 177 -----KTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQK 231
++ EKG P+ Y ++ +ID D F + I +++DPQ+
Sbjct: 227 PASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDA-DSRPKFRELIIEFSKMARDPQR 285
Query: 232 RL 233
L
Sbjct: 286 YL 287
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 121/242 (50%), Gaps = 14/242 (5%)
Query: 2 IAVKQHKDASS-QGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K+ ++A+S + ++E E V++ + +V LLG C +L+ + + G L
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 105
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLA 120
++ +H + + + + + AKG+ YL + ++HRD+ N+LV + DFGLA
Sbjct: 106 YVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
Query: 121 K-TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT-GLKTND-- 176
K E+ +Y E G V + ++A E + + ++DV+S+GV + +L+T G K D
Sbjct: 165 KLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
Query: 177 -----KTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQK 231
++ EKG P+ Y ++ +ID D F + I +++DPQ+
Sbjct: 224 PASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDA-DSRPKFRELIIEFSKMARDPQR 282
Query: 232 RL 233
L
Sbjct: 283 YL 284
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 121/242 (50%), Gaps = 14/242 (5%)
Query: 2 IAVKQHKDASS-QGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K+ ++A+S + ++E E V++ + +V LLG C +L+ + + G L
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGXLLD 105
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLA 120
++ +H + + + + + AKG+ YL + ++HRD+ N+LV + DFGLA
Sbjct: 106 YVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
Query: 121 K-TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT-GLKTND-- 176
K E+ +Y E G V + ++A E + + ++DV+S+GV + +L+T G K D
Sbjct: 165 KLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
Query: 177 -----KTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQK 231
++ EKG P+ Y ++ +ID D F + I +++DPQ+
Sbjct: 224 PASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDA-DSRPKFRELIIEFSKMARDPQR 282
Query: 232 RL 233
L
Sbjct: 283 YL 284
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 82/158 (51%), Gaps = 16/158 (10%)
Query: 21 EVQVLSKARHENVVMLLG------SCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
E+++L RHENV+ LL + D LV ++ G+ L KH + L ++
Sbjct: 74 ELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM--GTDLGKLMKHEK--LGEDR 129
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
+ KGL+Y+H IIHRD+ P N+ V D E + DFGLA+ + DS+ G
Sbjct: 130 IQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLAR--QADSEMX---G 184
Query: 135 VVGTLGYLAPEYVECGKLSTKT-DVYSFGVVLLQLITG 171
V T Y APE + T+T D++S G ++ ++ITG
Sbjct: 185 XVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITG 222
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 104/227 (45%), Gaps = 17/227 (7%)
Query: 17 EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGS-LD--QHL---SKHTRTPL 70
E E+Q +S+ H N+V S ++ LV + + GS LD +H+ +H L
Sbjct: 59 ELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVL 118
Query: 71 SWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYS 130
I +GL+YLH+N IHRD+ NIL+ D + DFG++ D +
Sbjct: 119 DESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDIT 178
Query: 131 ---TETGVVGTLGYLAPEYVECGK-LSTKTDVYSFGVVLLQLITGLKTNDKTLGEKGLVG 186
VGT ++APE +E + K D++SFG+ ++L TG K K L
Sbjct: 179 RNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVL-- 236
Query: 187 WARPLLKERNYPDLIDPRIIDCYDVHQLFWMV-QIAKKCLSKDPQKR 232
+L +N P ++ + D + + ++ CL KDP+KR
Sbjct: 237 ----MLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKR 279
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 121/242 (50%), Gaps = 14/242 (5%)
Query: 2 IAVKQHKDASS-QGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K+ ++A+S + ++E E V++ + +V LLG C +L+ + + G L
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 105
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLA 120
++ +H + + + + + AKG+ YL + ++HRD+ N+LV + DFGLA
Sbjct: 106 YVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
Query: 121 K-TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT-GLKTND-- 176
K E+ +Y E G V + ++A E + + ++DV+S+GV + +L+T G K D
Sbjct: 165 KLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
Query: 177 -----KTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQK 231
++ EKG P+ Y ++ +ID D F + I +++DPQ+
Sbjct: 224 PASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDA-DSRPKFRELIIEFSKMARDPQR 282
Query: 232 RL 233
L
Sbjct: 283 YL 284
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 74/157 (47%), Gaps = 16/157 (10%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKH------TRTPLSWEK 74
E+ +L + H N+V LL NK LV+E+ L Q L K T PL K
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK 108
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
L +GL + H + ++HRD+ P N+L+ + L DFGLA+ T
Sbjct: 109 SYLFQL--LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXH 164
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLIT 170
V TL Y APE + C ST D++S G + +++T
Sbjct: 165 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 87/183 (47%), Gaps = 11/183 (6%)
Query: 2 IAVKQHKDASSQGDRE-FKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K K+ +S RE F E + + H ++V L+G ++ N ++ E G L
Sbjct: 41 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRS 99
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLA 120
L + L + A + L YL +HRD+ N+LV+ + LGDFGL+
Sbjct: 100 FLQVR-KFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 158
Query: 121 KTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT-------GLK 173
+ + + G + + ++APE + + ++ +DV+ FGV + +++ G+K
Sbjct: 159 RYMEDSTXXKASKGKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 217
Query: 174 TND 176
ND
Sbjct: 218 NND 220
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 74/157 (47%), Gaps = 16/157 (10%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKH------TRTPLSWEK 74
E+ +L + H N+V LL NK LV+E+ L Q L K T PL K
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK 106
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
L +GL + H + ++HRD+ P N+L+ + L DFGLA+ T
Sbjct: 107 SYLFQL--LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXH 162
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLIT 170
V TL Y APE + C ST D++S G + +++T
Sbjct: 163 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 74/157 (47%), Gaps = 16/157 (10%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKH------TRTPLSWEK 74
E+ +L + H N+V LL NK LV+E+ L Q L K T PL K
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK 106
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
L +GL + H + ++HRD+ P N+L+ + L DFGLA+ T
Sbjct: 107 SYLFQL--LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXH 162
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLIT 170
V TL Y APE + C ST D++S G + +++T
Sbjct: 163 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 123/255 (48%), Gaps = 40/255 (15%)
Query: 2 IAVKQHKDASS-QGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K+ ++A+S + ++E E V++ + +V LLG C +L+ + + G L
Sbjct: 50 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 108
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLA 120
++ +H + + + + + AKG+ YL + ++HRD+ N+LV + DFGLA
Sbjct: 109 YVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 167
Query: 121 K-TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT-GLKTND-- 176
K E+ +Y E G V + ++A E + + ++DV+S+GV + +L+T G K D
Sbjct: 168 KLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 226
Query: 177 -----KTLGEKGLVGWARPLLKERNYPDLIDPRI--IDCYDVHQLFWMVQ---------- 219
++ EKG ER L P I ID Y + + WM+
Sbjct: 227 PASEISSILEKG----------ER----LPQPPICTIDVYMIMRKCWMIDADSRPKFREL 272
Query: 220 -IAKKCLSKDPQKRL 233
I +++DPQ+ L
Sbjct: 273 IIEFSKMARDPQRYL 287
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 74/157 (47%), Gaps = 16/157 (10%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKH------TRTPLSWEK 74
E+ +L + H N+V LL NK LV+E+ L Q L K T PL K
Sbjct: 56 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK 110
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
L +GL + H + ++HRD+ P N+L+ + L DFGLA+ T
Sbjct: 111 SYLFQL--LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXH 166
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLIT 170
V TL Y APE + C ST D++S G + +++T
Sbjct: 167 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 123/255 (48%), Gaps = 40/255 (15%)
Query: 2 IAVKQHKDASS-QGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K+ ++A+S + ++E E V++ + +V LLG C +L+ + + G L
Sbjct: 57 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 115
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLA 120
++ +H + + + + + AKG+ YL + ++HRD+ N+LV + DFGLA
Sbjct: 116 YVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 174
Query: 121 K-TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT-GLKTND-- 176
K E+ +Y E G V + ++A E + + ++DV+S+GV + +L+T G K D
Sbjct: 175 KLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 233
Query: 177 -----KTLGEKGLVGWARPLLKERNYPDLIDPRI--IDCYDVHQLFWMVQ---------- 219
++ EKG ER L P I ID Y + + WM+
Sbjct: 234 PASEISSILEKG----------ER----LPQPPICTIDVYMIMRKCWMIDADSRPKFREL 279
Query: 220 -IAKKCLSKDPQKRL 233
I +++DPQ+ L
Sbjct: 280 IIEFSKMARDPQRYL 294
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 74/157 (47%), Gaps = 16/157 (10%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKH------TRTPLSWEK 74
E+ +L + H N+V LL NK LV+E+ L Q L K T PL K
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK 109
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
L +GL + H + ++HRD+ P N+L+ + L DFGLA+ T
Sbjct: 110 SYLFQL--LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXH 165
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLIT 170
V TL Y APE + C ST D++S G + +++T
Sbjct: 166 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 74/157 (47%), Gaps = 16/157 (10%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKH------TRTPLSWEK 74
E+ +L + H N+V LL NK LV+E+ L Q L K T PL K
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK 108
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
L +GL + H + ++HRD+ P N+L+ + L DFGLA+ T
Sbjct: 109 SYLFQL--LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXH 164
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLIT 170
V TL Y APE + C ST D++S G + +++T
Sbjct: 165 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 74/157 (47%), Gaps = 16/157 (10%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKH------TRTPLSWEK 74
E+ +L + H N+V LL NK LV+E+ L Q L K T PL K
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK 105
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
L +GL + H + ++HRD+ P N+L+ + L DFGLA+ T
Sbjct: 106 SYLFQL--LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXH 161
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLIT 170
V TL Y APE + C ST D++S G + +++T
Sbjct: 162 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 74/157 (47%), Gaps = 16/157 (10%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKH------TRTPLSWEK 74
E+ +L + H N+V LL NK LV+E+ L Q L K T PL K
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK 109
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
L +GL + H + ++HRD+ P N+L+ + L DFGLA+ T
Sbjct: 110 SYLFQL--LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXH 165
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLIT 170
V TL Y APE + C ST D++S G + +++T
Sbjct: 166 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 74/157 (47%), Gaps = 16/157 (10%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKH------TRTPLSWEK 74
E+ +L + H N+V LL NK LV+E+ L Q L K T PL K
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK 106
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
L +GL + H + ++HRD+ P N+L+ + L DFGLA+ T
Sbjct: 107 SYLFQL--LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXH 162
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLIT 170
V TL Y APE + C ST D++S G + +++T
Sbjct: 163 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 74/157 (47%), Gaps = 16/157 (10%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKH------TRTPLSWEK 74
E+ +L + H N+V LL NK LV+E+ L Q L K T PL K
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK 108
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
L +GL + H + ++HRD+ P N+L+ + L DFGLA+ T
Sbjct: 109 SYLFQL--LQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXH 164
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLIT 170
V TL Y APE + C ST D++S G + +++T
Sbjct: 165 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 74/157 (47%), Gaps = 16/157 (10%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKH------TRTPLSWEK 74
E+ +L + H N+V LL NK LV+E+ L Q L K T PL K
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK 105
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
L +GL + H + ++HRD+ P N+L+ + L DFGLA+ T
Sbjct: 106 SYLFQL--LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXH 161
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLIT 170
V TL Y APE + C ST D++S G + +++T
Sbjct: 162 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 74/157 (47%), Gaps = 16/157 (10%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKH------TRTPLSWEK 74
E+ +L + H N+V LL NK LV+E+ L Q L K T PL K
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK 107
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
L +GL + H + ++HRD+ P N+L+ + L DFGLA+ T
Sbjct: 108 SYLFQL--LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXH 163
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLIT 170
V TL Y APE + C ST D++S G + +++T
Sbjct: 164 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLD----QHLSKHTRTPLSWEKRM 76
E+ +L + H N+V LL NK LV+E++ S+D S T PL K
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSY 111
Query: 77 KIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVV 136
L +GL + H + ++HRD+ P N+L+ + L DFGLA+ T V
Sbjct: 112 LFQL--LQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEV 167
Query: 137 GTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLIT 170
TL Y APE + C ST D++S G + +++T
Sbjct: 168 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 74/157 (47%), Gaps = 16/157 (10%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKH------TRTPLSWEK 74
E+ +L + H N+V LL NK LV+E+ L Q L K T PL K
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK 107
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
L +GL + H + ++HRD+ P N+L+ + L DFGLA+ T
Sbjct: 108 SYLFQL--LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXH 163
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLIT 170
V TL Y APE + C ST D++S G + +++T
Sbjct: 164 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 74/157 (47%), Gaps = 16/157 (10%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKH------TRTPLSWEK 74
E+ +L + H N+V LL NK LV+E+ L Q L K T PL K
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK 107
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
L +GL + H + ++HRD+ P N+L+ + L DFGLA+ T
Sbjct: 108 SYLFQL--LQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXH 163
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLIT 170
V TL Y APE + C ST D++S G + +++T
Sbjct: 164 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 74/157 (47%), Gaps = 16/157 (10%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKH------TRTPLSWEK 74
E+ +L + H N+V LL NK LV+E+ L Q L K T PL K
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK 106
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
L +GL + H + ++HRD+ P N+L+ + L DFGLA+ T
Sbjct: 107 SYLFQL--LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXH 162
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLIT 170
V TL Y APE + C ST D++S G + +++T
Sbjct: 163 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 32/229 (13%)
Query: 17 EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRM 76
E + EV +L + RH N++ L + +L+ E V G L L++ + L+ ++
Sbjct: 61 EIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAE--KESLTEDEAT 118
Query: 77 KIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEP----MLGDFGLAKTQREDSDYSTE 132
+ G+ YLH I H D+ P NI++ P L DFG+A +++
Sbjct: 119 QFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN- 177
Query: 133 TGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTNDKTLGEKGLVGWARPLL 192
+ GT ++APE V L + D++S GV+ L++G A P L
Sbjct: 178 --IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG----------------ASPFL 219
Query: 193 KERNYPDLIDPRIIDCYDVHQLFW--MVQIAK----KCLSKDPQKRLPM 235
E L + ++ YD + ++ ++AK + L KDP++R+ +
Sbjct: 220 GETKQETLTNISAVN-YDFDEEYFSNTSELAKDFIRRLLVKDPKRRMXI 267
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 77/156 (49%), Gaps = 10/156 (6%)
Query: 19 KSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKI 78
K E +L + H +V L + K L+ +++ G L LSK + E+ +K
Sbjct: 74 KMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV---MFTEEDVKF 130
Query: 79 ALGA-AKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK--TQREDSDYSTETGV 135
L A L +LH II+RD+ P NIL+ + L DFGL+K E YS
Sbjct: 131 YLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS----F 186
Query: 136 VGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
GT+ Y+APE V + D +SFGV++ +++TG
Sbjct: 187 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 82/156 (52%), Gaps = 10/156 (6%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLL--VYEYVCNGSLDQHLSKHTRTPLSWEKRMKI 78
E+ +L K H NVV L+ D N+ L V+E V G + + T PLS ++
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPV---MEVPTLKPLSEDQARFY 142
Query: 79 ALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
KG++YLH IIHRD+ P+N+LV D + DFG++ + + SD + + VGT
Sbjct: 143 FQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVS-NEFKGSD-ALLSNTVGT 200
Query: 139 LGYLAPEYV-ECGKLST--KTDVYSFGVVLLQLITG 171
++APE + E K+ + DV++ GV L + G
Sbjct: 201 PAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFG 236
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 87/183 (47%), Gaps = 11/183 (6%)
Query: 2 IAVKQHKDASSQGDRE-FKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K K+ +S RE F E + + H ++V L+G ++ N ++ E G L
Sbjct: 421 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRS 479
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLA 120
L + L + A + L YL +HRD+ N+LV+ LGDFGL+
Sbjct: 480 FLQVR-KFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLS 538
Query: 121 KTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT-------GLK 173
+ + + Y G + + ++APE + + ++ +DV+ FGV + +++ G+K
Sbjct: 539 RYMEDSTYYKASKGKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 597
Query: 174 TND 176
ND
Sbjct: 598 NND 600
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 93/171 (54%), Gaps = 5/171 (2%)
Query: 2 IAVKQHKDASS-QGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K+ ++A+S + ++E E V++ + +V LLG C +L+ + + G L
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 105
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLA 120
++ +H + + + + + AKG+ YL + ++HRD+ N+LV + DFGLA
Sbjct: 106 YVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
Query: 121 K-TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
K E+ +Y E G V + ++A E + + ++DV+S+GV + +L+T
Sbjct: 165 KLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 77/156 (49%), Gaps = 10/156 (6%)
Query: 19 KSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKI 78
K E +L + H +V L + K L+ +++ G L LSK + E+ +K
Sbjct: 75 KMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV---MFTEEDVKF 131
Query: 79 ALGA-AKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK--TQREDSDYSTETGV 135
L A L +LH II+RD+ P NIL+ + L DFGL+K E YS
Sbjct: 132 YLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS----F 187
Query: 136 VGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
GT+ Y+APE V + D +SFGV++ +++TG
Sbjct: 188 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLD----QHLSKHTRTPLSWEKRM 76
E+ +L + H N+V LL NK LV+E++ S+D S T PL K
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSY 109
Query: 77 KIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVV 136
L +GL + H + ++HRD+ P N+L+ + L DFGLA+ T V
Sbjct: 110 LFQL--LQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEV 165
Query: 137 GTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLIT 170
TL Y APE + C ST D++S G + +++T
Sbjct: 166 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 106/233 (45%), Gaps = 25/233 (10%)
Query: 7 HKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGS--LDQHLSK 64
+KD S + ++E++VL H N++ + D + +V E C G L++ +S
Sbjct: 56 NKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME-TCEGGELLERIVSA 114
Query: 65 HTR-TPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILV--THDFEPM-LGDFGLA 120
R LS ++ L Y H +++H+D+ P NIL T P+ + DFGLA
Sbjct: 115 QARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLA 174
Query: 121 KTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG-LKTNDKTL 179
+ + D T GT Y+APE + ++ K D++S GVV+ L+TG L +L
Sbjct: 175 ELFKSDEH---STNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSL 230
Query: 180 GEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQKR 232
E + KE NY P D + K+ L+KDP++R
Sbjct: 231 EEVQ----QKATYKEPNYAVECRPLTPQAVD---------LLKQMLTKDPERR 270
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 77/157 (49%), Gaps = 8/157 (5%)
Query: 17 EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRM 76
+ + E+Q L RH +++ L S + +V EYV G L ++ K+ R L ++
Sbjct: 62 KIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGR--LDEKESR 119
Query: 77 KIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVV 136
++ G+ Y H + ++HRD+ P N+L+ + DFGL+ SD
Sbjct: 120 RLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM---SDGEFLRXSC 176
Query: 137 GTLGYLAPEYVECGKLST--KTDVYSFGVVLLQLITG 171
G+ Y APE + G+L + D++S GV+L L+ G
Sbjct: 177 GSPNYAAPEVIS-GRLYAGPEVDIWSSGVILYALLCG 212
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 79/158 (50%), Gaps = 12/158 (7%)
Query: 21 EVQVLSKAR-HENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIA 79
EV +L K H N++ L + LV++ + G L +L++ + LS ++ KI
Sbjct: 73 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE--KVTLSEKETRKIM 130
Query: 80 LGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTL 139
+ + LH+ NI+HRD+ P NIL+ D L DFG + Q + + E V GT
Sbjct: 131 RALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFS-CQLDPGEKLRE--VCGTP 187
Query: 140 GYLAPEYVECGK------LSTKTDVYSFGVVLLQLITG 171
YLAPE +EC + D++S GV++ L+ G
Sbjct: 188 SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 75/157 (47%), Gaps = 16/157 (10%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKH------TRTPLSWEK 74
E+ +L + H N+V LL NK LV+E+ L Q L K T PL K
Sbjct: 59 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK 113
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
L +GL + H + ++HRD+ P N+L+ + L DFGLA+ T T
Sbjct: 114 SYLFQL--LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTH 169
Query: 135 VVGTLGYLAPEYVECGK-LSTKTDVYSFGVVLLQLIT 170
V TL Y APE + K ST D++S G + +++T
Sbjct: 170 EVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVT 206
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 80/167 (47%), Gaps = 8/167 (4%)
Query: 8 KDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR 67
K S++ ++ + E ++ K +H N+V L S + + LV++ V G L + + R
Sbjct: 41 KKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV--AR 98
Query: 68 TPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPM---LGDFGLAKTQR 124
S + + Y H N I+HR++ P N+L+ + L DFGLA
Sbjct: 99 EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAI--- 155
Query: 125 EDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
E +D G GT GYL+PE ++ S D+++ GV+L L+ G
Sbjct: 156 EVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 79/158 (50%), Gaps = 12/158 (7%)
Query: 21 EVQVLSKAR-HENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIA 79
EV +L K H N++ L + LV++ + G L +L++ + LS ++ KI
Sbjct: 60 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE--KVTLSEKETRKIM 117
Query: 80 LGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTL 139
+ + LH+ NI+HRD+ P NIL+ D L DFG + Q + + E V GT
Sbjct: 118 RALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFS-CQLDPGEKLRE--VCGTP 174
Query: 140 GYLAPEYVECGK------LSTKTDVYSFGVVLLQLITG 171
YLAPE +EC + D++S GV++ L+ G
Sbjct: 175 SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 75/157 (47%), Gaps = 16/157 (10%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKH------TRTPLSWEK 74
E+ +L + H N+V LL NK LV+E+ L Q L K T PL K
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK 106
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
L +GL + H + ++HRD+ P N+L+ + L DFGLA+ T T
Sbjct: 107 SYLFQL--LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTH 162
Query: 135 VVGTLGYLAPEYVECGK-LSTKTDVYSFGVVLLQLIT 170
V TL Y APE + K ST D++S G + +++T
Sbjct: 163 EVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 72/153 (47%), Gaps = 5/153 (3%)
Query: 19 KSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKI 78
+ E+ VLS+ V GS K ++ EY+ GS L PL + I
Sbjct: 53 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP---GPLDETQIATI 109
Query: 79 ALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
KGL YLH IHRD+ N+L++ E L DFG+A Q D+ T VGT
Sbjct: 110 LREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVA-GQLTDTQIKRNT-FVGT 167
Query: 139 LGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
++APE ++ +K D++S G+ ++L G
Sbjct: 168 PFWMAPEVIKQSAYDSKADIWSLGITAIELARG 200
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 98/235 (41%), Gaps = 32/235 (13%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIAL 80
E ++L+K +V L + LV + G + H+ +++ I
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 81 GA--AKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
A GL++LH+ NII+RD+ P N+L+ D + D GLA + + + G GT
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK--AGQTKTKGYAGT 352
Query: 139 LGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT--------GLKTNDKTLGEKGLVGWARP 190
G++APE + + D ++ GV L ++I G K +K L + R
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQ-------RV 405
Query: 191 LLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQKRLPM-DTVVDALKS 244
L + YPD P D + L KDP+KRL D D L++
Sbjct: 406 LEQAVTYPDKFSPASKD------------FCEALLQKDPEKRLGFRDGSCDGLRT 448
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 80/167 (47%), Gaps = 8/167 (4%)
Query: 8 KDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR 67
K S++ ++ + E ++ K +H N+V L S + + LV++ V G L + + R
Sbjct: 42 KKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV--AR 99
Query: 68 TPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPM---LGDFGLAKTQR 124
S + + Y H N I+HR++ P N+L+ + L DFGLA
Sbjct: 100 EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAI--- 156
Query: 125 EDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
E +D G GT GYL+PE ++ S D+++ GV+L L+ G
Sbjct: 157 EVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 98/235 (41%), Gaps = 32/235 (13%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIAL 80
E ++L+K +V L + LV + G + H+ +++ I
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 81 GA--AKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
A GL++LH+ NII+RD+ P N+L+ D + D GLA + + + G GT
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK--AGQTKTKGYAGT 352
Query: 139 LGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT--------GLKTNDKTLGEKGLVGWARP 190
G++APE + + D ++ GV L ++I G K +K L + R
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQ-------RV 405
Query: 191 LLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQKRLPM-DTVVDALKS 244
L + YPD P D + L KDP+KRL D D L++
Sbjct: 406 LEQAVTYPDKFSPASKD------------FCEALLQKDPEKRLGFRDGSCDGLRT 448
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 98/235 (41%), Gaps = 32/235 (13%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIAL 80
E ++L+K +V L + LV + G + H+ +++ I
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 81 GA--AKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
A GL++LH+ NII+RD+ P N+L+ D + D GLA + + + G GT
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK--AGQTKTKGYAGT 352
Query: 139 LGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT--------GLKTNDKTLGEKGLVGWARP 190
G++APE + + D ++ GV L ++I G K +K L + R
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQ-------RV 405
Query: 191 LLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQKRLPM-DTVVDALKS 244
L + YPD P D + L KDP+KRL D D L++
Sbjct: 406 LEQAVTYPDKFSPASKD------------FCEALLQKDPEKRLGFRDGSCDGLRT 448
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 116/271 (42%), Gaps = 46/271 (16%)
Query: 11 SSQGDREFKSEVQVLSKA--RHENVVMLLGS----CSDGNKRLLVYEYVCNGSLDQHLSK 64
SS+ ++ + E ++ + RH+N++ + S + + L+ Y +GSL L +
Sbjct: 40 SSRDEQSWFRETEIYNTVLLRHDNILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQR 99
Query: 65 HTRTPLSWEKRMKIALGAAKGLQYLH--------ENNIIHRDMGPNNILVTHDFEPMLGD 116
T P +++A+ AA GL +LH + I HRD N+LV + + + D
Sbjct: 100 QTLEP---HLALRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIAD 156
Query: 117 FGLAKTQREDSDYST--ETGVVGTLGYLAPEYV------ECGKLSTKTDVYSFGVVLLQL 168
GLA + SDY VGT Y+APE + +C + TD+++FG+VL ++
Sbjct: 157 LGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
Query: 169 ITGLKTNDKTLGEKGLVGWARPLLKER--NYPDLIDPRIIDCYDVHQ------------L 214
N G+V RP + N P D + + C D L
Sbjct: 217 ARRTIVN-------GIVEDYRPPFYDVVPNDPSFEDMKKVVCVDQQTPTIPNRLAADPVL 269
Query: 215 FWMVQIAKKCLSKDPQKRLPMDTVVDALKSI 245
+ Q+ ++C +P RL + L+ I
Sbjct: 270 SGLAQMMRECWYPNPSARLTALRIKKTLQKI 300
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 80/167 (47%), Gaps = 8/167 (4%)
Query: 8 KDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR 67
K S++ ++ + E ++ K +H N+V L S + + LV++ V G L + + R
Sbjct: 42 KKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV--AR 99
Query: 68 TPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPM---LGDFGLAKTQR 124
S + + Y H N I+HR++ P N+L+ + L DFGLA
Sbjct: 100 EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAI--- 156
Query: 125 EDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
E +D G GT GYL+PE ++ S D+++ GV+L L+ G
Sbjct: 157 EVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 98/235 (41%), Gaps = 32/235 (13%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIAL 80
E ++L+K +V L + LV + G + H+ +++ I
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 81 GA--AKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
A GL++LH+ NII+RD+ P N+L+ D + D GLA + + + G GT
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK--AGQTKTKGYAGT 352
Query: 139 LGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT--------GLKTNDKTLGEKGLVGWARP 190
G++APE + + D ++ GV L ++I G K +K L + R
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQ-------RV 405
Query: 191 LLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQKRLPM-DTVVDALKS 244
L + YPD P D + L KDP+KRL D D L++
Sbjct: 406 LEQAVTYPDKFSPASKD------------FCEALLQKDPEKRLGFRDGSCDGLRT 448
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 75/153 (49%), Gaps = 8/153 (5%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHL--SKHTRTPLSWEKRMKI 78
E+ +L + H N+V LL NK LV+E++ + L + S T PL K
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLF 113
Query: 79 ALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
L +GL + H + ++HRD+ P N+L+ + L DFGLA+ T V T
Sbjct: 114 QL--LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 169
Query: 139 LGYLAPE-YVECGKLSTKTDVYSFGVVLLQLIT 170
L Y APE + C ST D++S G + +++T
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 72/153 (47%), Gaps = 5/153 (3%)
Query: 19 KSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKI 78
+ E+ VLS+ V GS K ++ EY+ GS L PL + I
Sbjct: 73 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP---GPLDETQIATI 129
Query: 79 ALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
KGL YLH IHRD+ N+L++ E L DFG+A Q D+ T VGT
Sbjct: 130 LREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVA-GQLTDTQIKRNT-FVGT 187
Query: 139 LGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
++APE ++ +K D++S G+ ++L G
Sbjct: 188 PFWMAPEVIKQSAYDSKADIWSLGITAIELARG 220
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 121/242 (50%), Gaps = 14/242 (5%)
Query: 2 IAVKQHKDASS-QGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K+ ++A+S + ++E E V++ + +V LLG C +L+ + + G L
Sbjct: 44 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 102
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLA 120
++ +H + + + + + A+G+ YL + ++HRD+ N+LV + DFGLA
Sbjct: 103 YVREH-KDNIGSQYLLNWCVQIAEGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 161
Query: 121 K-TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT-GLKTND-- 176
K E+ +Y E G V + ++A E + + ++DV+S+GV + +L+T G K D
Sbjct: 162 KLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 220
Query: 177 -----KTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQK 231
++ EKG P+ Y ++ +ID D F + I +++DPQ+
Sbjct: 221 PASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDA-DSRPKFRELIIEFSKMARDPQR 279
Query: 232 RL 233
L
Sbjct: 280 YL 281
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 5/154 (3%)
Query: 19 KSEVQVLSKARHENVVMLLGSCSDGNKRLL-VYEYVCNGSLDQHLSKHTRTPLSWEKRMK 77
++E V +A + ++ L SC RL V EYV G L H+ + + P +
Sbjct: 57 QTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYS 116
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
+ A L YLHE II+RD+ +N+L+ + L D+G+ K D T + G
Sbjct: 117 AEISLA--LNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--TTSXFCG 172
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T Y+APE + D ++ GV++ +++ G
Sbjct: 173 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 206
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 80/154 (51%), Gaps = 3/154 (1%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTP-LSWEKRMKIA 79
E+Q+L + RHENV+ + + Y+ ++ L K ++ LS +
Sbjct: 91 EIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFL 150
Query: 80 LGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYS-TETGVVGT 138
+GL+Y+H N++HRD+ P+N+L+ + + DFGLA+ + D++ T V T
Sbjct: 151 YQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVAT 210
Query: 139 LGYLAPEYVECGKLSTKT-DVYSFGVVLLQLITG 171
Y APE + K TK+ D++S G +L ++++
Sbjct: 211 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 244
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 80/167 (47%), Gaps = 8/167 (4%)
Query: 8 KDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR 67
K S++ ++ + E ++ K +H N+V L S + + LV++ V G L + + R
Sbjct: 65 KKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV--AR 122
Query: 68 TPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPM---LGDFGLAKTQR 124
S + + Y H N I+HR++ P N+L+ + L DFGLA
Sbjct: 123 EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAI--- 179
Query: 125 EDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
E +D G GT GYL+PE ++ S D+++ GV+L L+ G
Sbjct: 180 EVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 81/175 (46%), Gaps = 14/175 (8%)
Query: 9 DASSQGDREFKSEVQVLSK-ARHENVVMLLGSCSDGN------KRLLVYEYVCNGSLDQH 61
D + + E K E+ +L K + H N+ G+ N + LV E+ GS+
Sbjct: 58 DVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDL 117
Query: 62 LSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK 121
+ L E I +GL +LH++ +IHRD+ N+L+T + E L DFG+
Sbjct: 118 IKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGV-- 175
Query: 122 TQREDSDYSTETGVVGTLGYLAPEYVECGK-----LSTKTDVYSFGVVLLQLITG 171
+ + D +GT ++APE + C + K+D++S G+ +++ G
Sbjct: 176 SAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 86/178 (48%), Gaps = 18/178 (10%)
Query: 1 MIAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+ A K + S + ++ E+++L+ H +V LLG+ K ++ E+ G++D
Sbjct: 38 LAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDA 97
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFG-- 118
+ + R L+ + + + L +LH IIHRD+ N+L+T + + L DFG
Sbjct: 98 IMLELDRG-LTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVS 156
Query: 119 ---LAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLST-----KTDVYSFGVVLLQL 168
L Q+ DS +GT ++APE V C + K D++S G+ L+++
Sbjct: 157 AKNLKTLQKRDS-------FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 207
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 5/154 (3%)
Query: 19 KSEVQVLSKARHENVVMLLGSCSDGNKRLL-VYEYVCNGSLDQHLSKHTRTPLSWEKRMK 77
++E V +A + ++ L SC RL V EYV G L H+ + + P +
Sbjct: 53 QTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYS 112
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
+ A L YLHE II+RD+ +N+L+ + L D+G+ K D T + G
Sbjct: 113 AEISLA--LNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--TTSXFCG 168
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T Y+APE + D ++ GV++ +++ G
Sbjct: 169 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 202
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 87/175 (49%), Gaps = 10/175 (5%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQH 61
+A K K + E K+E+ V+++ H N++ L + N +LV EYV G L
Sbjct: 117 LAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDR 176
Query: 62 L--SKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNIL-VTHDFEPM-LGDF 117
+ + T L MK +G++++H+ I+H D+ P NIL V D + + + DF
Sbjct: 177 IIDESYNLTELDTILFMK---QICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDF 233
Query: 118 GLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGL 172
GLA+ + GT +LAPE V +S TD++S GV+ L++GL
Sbjct: 234 GLARRYKPREKLKVN---FGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGL 285
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 86/178 (48%), Gaps = 18/178 (10%)
Query: 1 MIAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+ A K + S + ++ E+++L+ H +V LLG+ K ++ E+ G++D
Sbjct: 46 LAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDA 105
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFG-- 118
+ + R L+ + + + L +LH IIHRD+ N+L+T + + L DFG
Sbjct: 106 IMLELDRG-LTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVS 164
Query: 119 ---LAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLST-----KTDVYSFGVVLLQL 168
L Q+ DS +GT ++APE V C + K D++S G+ L+++
Sbjct: 165 AKNLKTLQKRDS-------FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 215
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 88/180 (48%), Gaps = 11/180 (6%)
Query: 2 IAVKQHK-DASSQGD-REFKSEVQVLSKARHENVVMLLGSCSDGN-----KRLLVYEYVC 54
+AVK K D SSQ + EF SE + H NV+ LLG C + + K +++ ++
Sbjct: 65 VAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMK 124
Query: 55 NGSLDQHL--SKHTRTP--LSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDF 110
G L +L S+ P + + +K + A G++YL N +HRD+ N ++ D
Sbjct: 125 YGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDM 184
Query: 111 EPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
+ DFGL+K Y + ++A E + ++K+DV++FGV + ++ T
Sbjct: 185 TVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 83/172 (48%), Gaps = 16/172 (9%)
Query: 4 VKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSL-DQHL 62
VKQ D S EVQ+L + H N++ L D LV E G L D+ +
Sbjct: 70 VKQKTDKES-----LLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII 124
Query: 63 SKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILV---THDFEPMLGDFGL 119
S R S +I G+ Y+H+N I+HRD+ P N+L+ + D + DFGL
Sbjct: 125 S---RKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGL 181
Query: 120 AKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
+ T E S + +GT Y+APE + G K DV+S GV+L L++G
Sbjct: 182 S-THFEASKKMKDK--IGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 229
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 5/154 (3%)
Query: 19 KSEVQVLSKARHENVVMLLGSCSDGNKRLL-VYEYVCNGSLDQHLSKHTRTPLSWEKRMK 77
++E V +A + ++ L SC RL V EYV G L H+ + + P +
Sbjct: 68 QTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYS 127
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
+ A L YLHE II+RD+ +N+L+ + L D+G+ K D T + G
Sbjct: 128 AEISLA--LNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--TTSXFCG 183
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T Y+APE + D ++ GV++ +++ G
Sbjct: 184 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 217
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 5/154 (3%)
Query: 19 KSEVQVLSKARHENVVMLLGSCSDGNKRLL-VYEYVCNGSLDQHLSKHTRTPLSWEKRMK 77
++E V +A + ++ L SC RL V EYV G L H+ + + P +
Sbjct: 100 QTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYS 159
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
+ A L YLHE II+RD+ +N+L+ + L D+G+ K D T + G
Sbjct: 160 AEISLA--LNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--TTSTFCG 215
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T Y+APE + D ++ GV++ +++ G
Sbjct: 216 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 249
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 120/242 (49%), Gaps = 14/242 (5%)
Query: 2 IAVKQHKDASS-QGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+ + ++A+S + ++E E V++ + +V LLG C +L+ + + G L
Sbjct: 81 VAIMELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 139
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLA 120
++ +H + + + + + AKG+ YL + ++HRD+ N+LV + DFGLA
Sbjct: 140 YVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 198
Query: 121 K-TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT-GLKTND-- 176
K E+ +Y E G V + ++A E + + ++DV+S+GV + +L+T G K D
Sbjct: 199 KLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 257
Query: 177 -----KTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQK 231
++ EKG P+ Y ++ +ID D F + I +++DPQ+
Sbjct: 258 PASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDA-DSRPKFRELIIEFSKMARDPQR 316
Query: 232 RL 233
L
Sbjct: 317 YL 318
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 121/242 (50%), Gaps = 14/242 (5%)
Query: 2 IAVKQHKDASS-QGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K+ ++A+S + ++E E V++ + +V LLG C +L++ + + G L
Sbjct: 51 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLD 109
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLA 120
++ +H + + + + + AKG+ YL + ++HRD+ N+LV + DFG A
Sbjct: 110 YVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRA 168
Query: 121 K-TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT-GLKTND-- 176
K E+ +Y E G V + ++A E + + ++DV+S+GV + +L+T G K D
Sbjct: 169 KLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 227
Query: 177 -----KTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQK 231
++ EKG P+ Y ++ +ID D F + I +++DPQ+
Sbjct: 228 PASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDA-DSRPKFRELIIEFSKMARDPQR 286
Query: 232 RL 233
L
Sbjct: 287 YL 288
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 121/242 (50%), Gaps = 14/242 (5%)
Query: 2 IAVKQHKDASS-QGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K+ ++A+S + ++E E V++ + +V LLG C +L++ + + G L
Sbjct: 49 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLD 107
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLA 120
++ +H + + + + + AKG+ YL + ++HRD+ N+LV + DFG A
Sbjct: 108 YVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRA 166
Query: 121 K-TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT-GLKTND-- 176
K E+ +Y E G V + ++A E + + ++DV+S+GV + +L+T G K D
Sbjct: 167 KLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 225
Query: 177 -----KTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQK 231
++ EKG P+ Y ++ +ID D F + I +++DPQ+
Sbjct: 226 PASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDA-DSRPKFRELIIEFSKMARDPQR 284
Query: 232 RL 233
L
Sbjct: 285 YL 286
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 80/154 (51%), Gaps = 3/154 (1%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTP-LSWEKRMKIA 79
E+++L + RHEN++ + + Y+ ++ L K +T LS +
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 130
Query: 80 LGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYS-TETGVVGT 138
+GL+Y+H N++HRD+ P+N+L+ + + DFGLA+ D D++ T V T
Sbjct: 131 YQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVAT 190
Query: 139 LGYLAPEYVECGKLSTKT-DVYSFGVVLLQLITG 171
Y APE + K TK+ D++S G +L ++++
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 224
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 120/242 (49%), Gaps = 14/242 (5%)
Query: 2 IAVKQHKDASS-QGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K+ ++A+S + ++E E V++ + +V LLG C +L+ + + G L
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 105
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLA 120
++ +H + + + + + AKG+ YL + ++HRD+ N+LV + DFG A
Sbjct: 106 YVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRA 164
Query: 121 K-TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT-GLKTND-- 176
K E+ +Y E G V + ++A E + + ++DV+S+GV + +L+T G K D
Sbjct: 165 KLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
Query: 177 -----KTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQK 231
++ EKG P+ Y ++ +ID D F + I +++DPQ+
Sbjct: 224 PASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDA-DSRPKFRELIIEFSKMARDPQR 282
Query: 232 RL 233
L
Sbjct: 283 YL 284
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 80/154 (51%), Gaps = 3/154 (1%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTP-LSWEKRMKIA 79
E+++L + RHEN++ + + Y+ ++ L K +T LS +
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 130
Query: 80 LGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYS-TETGVVGT 138
+GL+Y+H N++HRD+ P+N+L+ + + DFGLA+ D D++ T V T
Sbjct: 131 YQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 139 LGYLAPEYVECGKLSTKT-DVYSFGVVLLQLITG 171
Y APE + K TK+ D++S G +L ++++
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 224
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 84/179 (46%), Gaps = 13/179 (7%)
Query: 1 MIAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
++ V + + + K E + +H ++V LL + S +V+E++ L
Sbjct: 56 IVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCF 115
Query: 61 HLSKHTRTPLSWEKR-----MKIALGAAKGLQYLHENNIIHRDMGPNNILVT--HDFEPM 113
+ K + + M+ L A L+Y H+NNIIHRD+ P N+L+ + P+
Sbjct: 116 EIVKRADAGFVYSEAVASHYMRQILEA---LRYCHDNNIIHRDVKPENVLLASKENSAPV 172
Query: 114 -LGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
LGDFG+A E G VGT ++APE V+ DV+ GV+L L++G
Sbjct: 173 KLGDFGVAIQLGESG--LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 76/158 (48%), Gaps = 12/158 (7%)
Query: 21 EVQVLSKAR-HENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIA 79
EV +L K H N++ L + LV++ + G L +L++ + LS ++ KI
Sbjct: 73 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE--KVTLSEKETRKIM 130
Query: 80 LGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTL 139
+ + LH+ NI+HRD+ P NIL+ D L DFG + + V GT
Sbjct: 131 RALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRS---VCGTP 187
Query: 140 GYLAPEYVECGK------LSTKTDVYSFGVVLLQLITG 171
YLAPE +EC + D++S GV++ L+ G
Sbjct: 188 SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 80/154 (51%), Gaps = 3/154 (1%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTP-LSWEKRMKIA 79
E+++L + RHEN++ + + Y+ ++ L K +T LS +
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 130
Query: 80 LGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYS-TETGVVGT 138
+GL+Y+H N++HRD+ P+N+L+ + + DFGLA+ D D++ T V T
Sbjct: 131 YQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 139 LGYLAPEYVECGKLSTKT-DVYSFGVVLLQLITG 171
Y APE + K TK+ D++S G +L ++++
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 224
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 120/242 (49%), Gaps = 14/242 (5%)
Query: 2 IAVKQHKDASS-QGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K+ ++A+S + ++E E V++ + +V LLG C +L+ + + G L
Sbjct: 54 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 112
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLA 120
++ +H + + + + + AKG+ YL + ++HRD+ N+LV + DFG A
Sbjct: 113 YVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRA 171
Query: 121 K-TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT-GLKTND-- 176
K E+ +Y E G V + ++A E + + ++DV+S+GV + +L+T G K D
Sbjct: 172 KLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 230
Query: 177 -----KTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQK 231
++ EKG P+ Y ++ +ID D F + I +++DPQ+
Sbjct: 231 PASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDA-DSRPKFRELIIEFSKMARDPQR 289
Query: 232 RL 233
L
Sbjct: 290 YL 291
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 80/154 (51%), Gaps = 3/154 (1%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTP-LSWEKRMKIA 79
E+++L + RHEN++ + + Y+ ++ L K +T LS +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 134
Query: 80 LGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYS-TETGVVGT 138
+GL+Y+H N++HRD+ P+N+L+ + + DFGLA+ D D++ T V T
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 139 LGYLAPEYVECGKLSTKT-DVYSFGVVLLQLITG 171
Y APE + K TK+ D++S G +L ++++
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 228
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 80/154 (51%), Gaps = 3/154 (1%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTP-LSWEKRMKIA 79
E+++L + RHEN++ + + Y+ ++ L K +T LS +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 134
Query: 80 LGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYS-TETGVVGT 138
+GL+Y+H N++HRD+ P+N+L+ + + DFGLA+ D D++ T V T
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 139 LGYLAPEYVECGKLSTKT-DVYSFGVVLLQLITG 171
Y APE + K TK+ D++S G +L ++++
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 228
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 80/154 (51%), Gaps = 3/154 (1%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTP-LSWEKRMKIA 79
E+++L + RHEN++ + + Y+ ++ L K +T LS +
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 130
Query: 80 LGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYS-TETGVVGT 138
+GL+Y+H N++HRD+ P+N+L+ + + DFGLA+ D D++ T V T
Sbjct: 131 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 139 LGYLAPEYVECGKLSTKT-DVYSFGVVLLQLITG 171
Y APE + K TK+ D++S G +L ++++
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 224
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 123/255 (48%), Gaps = 40/255 (15%)
Query: 2 IAVKQHKDASS-QGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K+ ++A+S + ++E E V++ + +V LLG C +L++ + + G L
Sbjct: 49 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLD 107
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLA 120
++ +H + + + + + AKG+ YL + ++HRD+ N+LV + DFG A
Sbjct: 108 YVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRA 166
Query: 121 K-TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT-GLKTND-- 176
K E+ +Y E G V + ++A E + + ++DV+S+GV + +L+T G K D
Sbjct: 167 KLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 225
Query: 177 -----KTLGEKGLVGWARPLLKERNYPDLIDPRI--IDCYDVHQLFWMVQ---------- 219
++ EKG ER L P I ID Y + + WM+
Sbjct: 226 PASEISSILEKG----------ER----LPQPPICTIDVYMIMRKCWMIDADSRPKFREL 271
Query: 220 -IAKKCLSKDPQKRL 233
I +++DPQ+ L
Sbjct: 272 IIEFSKMARDPQRYL 286
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 71/153 (46%), Gaps = 5/153 (3%)
Query: 19 KSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKI 78
+ E+ VLS+ V GS K ++ EY+ GS L PL + I
Sbjct: 68 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP---GPLDETQIATI 124
Query: 79 ALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
KGL YLH IHRD+ N+L++ E L DFG+A Q D+ VGT
Sbjct: 125 LREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVA-GQLTDTQIK-RNXFVGT 182
Query: 139 LGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
++APE ++ +K D++S G+ ++L G
Sbjct: 183 PFWMAPEVIKQSAYDSKADIWSLGITAIELARG 215
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 74/165 (44%), Gaps = 27/165 (16%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYV----------CNGSLDQHLSKHTRTPL 70
E+ +L + +H+N+V L K LV+E+ CNG LD + K
Sbjct: 51 EICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVK------ 104
Query: 71 SWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKT-QREDSDY 129
KGL + H N++HRD+ P N+L+ + E L DFGLA+ Y
Sbjct: 105 ------SFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCY 158
Query: 130 STETGVVGTLGYLAPEYVECGKL-STKTDVYSFGVVLLQLITGLK 173
S E V TL Y P+ + KL ST D++S G + +L +
Sbjct: 159 SAE---VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAAR 200
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 80/154 (51%), Gaps = 3/154 (1%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTP-LSWEKRMKIA 79
E+++L + RHEN++ + + Y+ ++ L K +T LS +
Sbjct: 69 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 128
Query: 80 LGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYS-TETGVVGT 138
+GL+Y+H N++HRD+ P+N+L+ + + DFGLA+ D D++ T V T
Sbjct: 129 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 188
Query: 139 LGYLAPEYVECGKLSTKT-DVYSFGVVLLQLITG 171
Y APE + K TK+ D++S G +L ++++
Sbjct: 189 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 222
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 80/154 (51%), Gaps = 3/154 (1%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTP-LSWEKRMKIA 79
E+++L + RHEN++ + + Y+ ++ L K +T LS +
Sbjct: 76 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 135
Query: 80 LGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYS-TETGVVGT 138
+GL+Y+H N++HRD+ P+N+L+ + + DFGLA+ D D++ T V T
Sbjct: 136 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 195
Query: 139 LGYLAPEYVECGKLSTKT-DVYSFGVVLLQLITG 171
Y APE + K TK+ D++S G +L ++++
Sbjct: 196 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 229
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 80/154 (51%), Gaps = 3/154 (1%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTP-LSWEKRMKIA 79
E+++L + RHEN++ + + Y+ ++ L K +T LS +
Sbjct: 77 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 136
Query: 80 LGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYS-TETGVVGT 138
+GL+Y+H N++HRD+ P+N+L+ + + DFGLA+ D D++ T V T
Sbjct: 137 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 196
Query: 139 LGYLAPEYVECGKLSTKT-DVYSFGVVLLQLITG 171
Y APE + K TK+ D++S G +L ++++
Sbjct: 197 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 230
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 80/154 (51%), Gaps = 3/154 (1%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTP-LSWEKRMKIA 79
E+++L + RHEN++ + + Y+ ++ L K +T LS +
Sbjct: 68 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 127
Query: 80 LGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYS-TETGVVGT 138
+GL+Y+H N++HRD+ P+N+L+ + + DFGLA+ D D++ T V T
Sbjct: 128 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 187
Query: 139 LGYLAPEYVECGKLSTKT-DVYSFGVVLLQLITG 171
Y APE + K TK+ D++S G +L ++++
Sbjct: 188 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 221
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 80/154 (51%), Gaps = 3/154 (1%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTP-LSWEKRMKIA 79
E+++L + RHEN++ + + Y+ ++ L K +T LS +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 134
Query: 80 LGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYS-TETGVVGT 138
+GL+Y+H N++HRD+ P+N+L+ + + DFGLA+ D D++ T V T
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 139 LGYLAPEYVECGKLSTKT-DVYSFGVVLLQLITG 171
Y APE + K TK+ D++S G +L ++++
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 228
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 80/154 (51%), Gaps = 3/154 (1%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTP-LSWEKRMKIA 79
E+++L + RHEN++ + + Y+ ++ L K +T LS +
Sbjct: 69 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 128
Query: 80 LGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYS-TETGVVGT 138
+GL+Y+H N++HRD+ P+N+L+ + + DFGLA+ D D++ T V T
Sbjct: 129 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 188
Query: 139 LGYLAPEYVECGKLSTKT-DVYSFGVVLLQLITG 171
Y APE + K TK+ D++S G +L ++++
Sbjct: 189 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 222
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 86/172 (50%), Gaps = 16/172 (9%)
Query: 4 VKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSL-DQHL 62
VKQ D S EVQ+L + H N++ L D LV E G L D+ +
Sbjct: 64 VKQKTDKES-----LLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII 118
Query: 63 SKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILV---THDFEPMLGDFGL 119
S+ + + + ++ L G+ Y+H+N I+HRD+ P N+L+ + D + DFGL
Sbjct: 119 SRKRFSEVDAARIIRQVLS---GITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGL 175
Query: 120 AKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
+ T E S + +GT Y+APE + G K DV+S GV+L L++G
Sbjct: 176 S-THFEASKKMKDK--IGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 223
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 80/154 (51%), Gaps = 3/154 (1%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTP-LSWEKRMKIA 79
E+++L + RHEN++ + + Y+ ++ L K +T LS +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 134
Query: 80 LGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYS-TETGVVGT 138
+GL+Y+H N++HRD+ P+N+L+ + + DFGLA+ D D++ T V T
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 139 LGYLAPEYVECGKLSTKT-DVYSFGVVLLQLITG 171
Y APE + K TK+ D++S G +L ++++
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 228
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 80/154 (51%), Gaps = 3/154 (1%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTP-LSWEKRMKIA 79
E+++L + RHEN++ + + Y+ ++ L K +T LS +
Sbjct: 73 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 132
Query: 80 LGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYS-TETGVVGT 138
+GL+Y+H N++HRD+ P+N+L+ + + DFGLA+ D D++ T V T
Sbjct: 133 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 192
Query: 139 LGYLAPEYVECGKLSTKT-DVYSFGVVLLQLITG 171
Y APE + K TK+ D++S G +L ++++
Sbjct: 193 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 226
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 80/154 (51%), Gaps = 3/154 (1%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTP-LSWEKRMKIA 79
E+++L + RHEN++ + + Y+ ++ L K +T LS +
Sbjct: 79 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 138
Query: 80 LGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYS-TETGVVGT 138
+GL+Y+H N++HRD+ P+N+L+ + + DFGLA+ D D++ T V T
Sbjct: 139 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 198
Query: 139 LGYLAPEYVECGKLSTKT-DVYSFGVVLLQLITG 171
Y APE + K TK+ D++S G +L ++++
Sbjct: 199 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 232
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 80/154 (51%), Gaps = 3/154 (1%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTP-LSWEKRMKIA 79
E+++L + RHEN++ + + Y+ ++ L K +T LS +
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 130
Query: 80 LGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYS-TETGVVGT 138
+GL+Y+H N++HRD+ P+N+L+ + + DFGLA+ D D++ T V T
Sbjct: 131 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 139 LGYLAPEYVECGKLSTKT-DVYSFGVVLLQLITG 171
Y APE + K TK+ D++S G +L ++++
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 224
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 71/153 (46%), Gaps = 5/153 (3%)
Query: 19 KSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKI 78
+ E+ VLS+ V GS K ++ EY+ GS L PL + I
Sbjct: 53 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP---GPLDETQIATI 109
Query: 79 ALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
KGL YLH IHRD+ N+L++ E L DFG+A Q D+ VGT
Sbjct: 110 LREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVA-GQLTDTQIK-RNXFVGT 167
Query: 139 LGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
++APE ++ +K D++S G+ ++L G
Sbjct: 168 PFWMAPEVIKQSAYDSKADIWSLGITAIELARG 200
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 80/154 (51%), Gaps = 3/154 (1%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTP-LSWEKRMKIA 79
E+++L + RHEN++ + + Y+ ++ L K +T LS +
Sbjct: 91 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 150
Query: 80 LGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYS-TETGVVGT 138
+GL+Y+H N++HRD+ P+N+L+ + + DFGLA+ D D++ T V T
Sbjct: 151 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 210
Query: 139 LGYLAPEYVECGKLSTKT-DVYSFGVVLLQLITG 171
Y APE + K TK+ D++S G +L ++++
Sbjct: 211 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 244
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 78/154 (50%), Gaps = 7/154 (4%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR-TPLSWEKRMKIA 79
E+++L + +H N+V LL + LV+EY C+ ++ L ++ R P K I
Sbjct: 52 EIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEY-CDHTVLHELDRYQRGVPEHLVK--SIT 108
Query: 80 LGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTL 139
+ + + H++N IHRD+ P NIL+T L DFG A+ SDY + V T
Sbjct: 109 WQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDE--VATR 166
Query: 140 GYLAPE-YVECGKLSTKTDVYSFGVVLLQLITGL 172
Y +PE V + DV++ G V +L++G+
Sbjct: 167 WYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGV 200
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 122/255 (47%), Gaps = 40/255 (15%)
Query: 2 IAVKQHKDASS-QGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K+ ++A+S + ++E E V++ + +V LLG C +L+ + + G L
Sbjct: 49 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 107
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLA 120
++ +H + + + + + AKG+ YL + ++HRD+ N+LV + DFG A
Sbjct: 108 YVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRA 166
Query: 121 K-TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT-GLKTND-- 176
K E+ +Y E G V + ++A E + + ++DV+S+GV + +L+T G K D
Sbjct: 167 KLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 225
Query: 177 -----KTLGEKGLVGWARPLLKERNYPDLIDPRI--IDCYDVHQLFWMVQ---------- 219
++ EKG ER L P I ID Y + + WM+
Sbjct: 226 PASEISSILEKG----------ER----LPQPPICTIDVYMIMRKCWMIDADSRPKFREL 271
Query: 220 -IAKKCLSKDPQKRL 233
I +++DPQ+ L
Sbjct: 272 IIEFSKMARDPQRYL 286
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 109/228 (47%), Gaps = 27/228 (11%)
Query: 2 IAVKQHKDASS-QGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+A+K ++ +S + ++E E V++ V LLG C +L V + + G L
Sbjct: 49 VAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRLLGICLTSTVQL-VTQLMPYGCLLD 107
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLA 120
H+ + R L + + + AKG+ YL + ++HRD+ N+LV + DFGLA
Sbjct: 108 HV-RENRGRLGSQDLLNWCMQIAKGMSYLEDVRLVHRDLAARNVLVKSPNHVKITDFGLA 166
Query: 121 K-TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTNDKTL 179
+ ++++Y + G V + ++A E + + + ++DV+S+GV + +L+ T
Sbjct: 167 RLLDIDETEYHADGGKV-PIKWMALESILRRRFTHQSDVWSYGVTVWELM--------TF 217
Query: 180 GEKGLVGWARPLLKERNYPDLID-------PRI--IDCYDVHQLFWMV 218
G K G + R PDL++ P I ID Y + WM+
Sbjct: 218 GAKPYDG-----IPAREIPDLLEKGERLPQPPICTIDVYMIMVKCWMI 260
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 74/154 (48%), Gaps = 8/154 (5%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIA 79
+E +VL RH + L + ++ V EY G L HLS R + E+R +
Sbjct: 59 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLS---RERVFTEERARF- 114
Query: 80 LGA--AKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
GA L+YLH ++++RD+ N+++ D + DFGL K SD +T G
Sbjct: 115 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI--SDGATMKXFCG 172
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T YLAPE +E D + GVV+ +++ G
Sbjct: 173 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 206
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 86/172 (50%), Gaps = 16/172 (9%)
Query: 4 VKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSL-DQHL 62
VKQ D S EVQ+L + H N++ L D LV E G L D+ +
Sbjct: 87 VKQKTDKES-----LLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII 141
Query: 63 SKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILV---THDFEPMLGDFGL 119
S+ + + + ++ L G+ Y+H+N I+HRD+ P N+L+ + D + DFGL
Sbjct: 142 SRKRFSEVDAARIIRQVLS---GITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGL 198
Query: 120 AKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
+ T E S + +GT Y+APE + G K DV+S GV+L L++G
Sbjct: 199 S-THFEASKKMKDK--IGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 246
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 74/154 (48%), Gaps = 8/154 (5%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIA 79
+E +VL RH + L + ++ V EY G L HLS R + E+R +
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLS---RERVFTEERARF- 109
Query: 80 LGA--AKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
GA L+YLH ++++RD+ N+++ D + DFGL K SD +T G
Sbjct: 110 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI--SDGATMKXFCG 167
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T YLAPE +E D + GVV+ +++ G
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 201
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 74/154 (48%), Gaps = 8/154 (5%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIA 79
+E +VL RH + L + ++ V EY G L HLS R + E+R +
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLS---RERVFTEERARF- 109
Query: 80 LGA--AKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
GA L+YLH ++++RD+ N+++ D + DFGL K SD +T G
Sbjct: 110 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI--SDGATMKXFCG 167
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T YLAPE +E D + GVV+ +++ G
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 201
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 74/154 (48%), Gaps = 8/154 (5%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIA 79
+E +VL RH + L + ++ V EY G L HLS R + E+R +
Sbjct: 57 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLS---RERVFTEERARF- 112
Query: 80 LGA--AKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
GA L+YLH ++++RD+ N+++ D + DFGL K SD +T G
Sbjct: 113 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI--SDGATMKTFCG 170
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T YLAPE +E D + GVV+ +++ G
Sbjct: 171 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 204
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 74/154 (48%), Gaps = 8/154 (5%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIA 79
+E +VL RH + L + ++ V EY G L HLS R + E+R +
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLS---RERVFTEERARF- 109
Query: 80 LGA--AKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
GA L+YLH ++++RD+ N+++ D + DFGL K SD +T G
Sbjct: 110 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI--SDGATMKTFCG 167
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T YLAPE +E D + GVV+ +++ G
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 201
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 74/154 (48%), Gaps = 8/154 (5%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIA 79
+E +VL RH + L + ++ V EY G L HLS R + E+R +
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLS---RERVFTEERARF- 109
Query: 80 LGA--AKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
GA L+YLH ++++RD+ N+++ D + DFGL K SD +T G
Sbjct: 110 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI--SDGATMKXFCG 167
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T YLAPE +E D + GVV+ +++ G
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 201
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 86/172 (50%), Gaps = 16/172 (9%)
Query: 4 VKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSL-DQHL 62
VKQ D S EVQ+L + H N++ L D LV E G L D+ +
Sbjct: 88 VKQKTDKES-----LLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII 142
Query: 63 SKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILV---THDFEPMLGDFGL 119
S+ + + + ++ L G+ Y+H+N I+HRD+ P N+L+ + D + DFGL
Sbjct: 143 SRKRFSEVDAARIIRQVLS---GITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGL 199
Query: 120 AKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
+ T E S + +GT Y+APE + G K DV+S GV+L L++G
Sbjct: 200 S-THFEASKKMKDK--IGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 247
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 74/154 (48%), Gaps = 8/154 (5%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIA 79
+E +VL RH + L + ++ V EY G L HLS R + E+R +
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLS---RERVFTEERARF- 109
Query: 80 LGA--AKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
GA L+YLH ++++RD+ N+++ D + DFGL K SD +T G
Sbjct: 110 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI--SDGATMKTFCG 167
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T YLAPE +E D + GVV+ +++ G
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 201
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 76/158 (48%), Gaps = 11/158 (6%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLL--VYEYVCNGSLDQHLSKHT--RTPLSWEKR 75
SEV +L + +H N+V D L V EY G L ++K T R L E
Sbjct: 54 SEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV 113
Query: 76 MKIALGAAKGLQYLHE-----NNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYS 130
+++ L+ H + ++HRD+ P N+ + LGDFGLA+ D D++
Sbjct: 114 LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFA 173
Query: 131 TETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQL 168
E VGT Y++PE + + K+D++S G +L +L
Sbjct: 174 KE--FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 79/154 (51%), Gaps = 3/154 (1%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTP-LSWEKRMKIA 79
E+++L RHEN++ + + Y+ ++ L K +T LS +
Sbjct: 73 EIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 132
Query: 80 LGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYS-TETGVVGT 138
+GL+Y+H N++HRD+ P+N+L+ + + DFGLA+ D D++ T V T
Sbjct: 133 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 192
Query: 139 LGYLAPEYVECGKLSTKT-DVYSFGVVLLQLITG 171
Y APE + K TK+ D++S G +L ++++
Sbjct: 193 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 226
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 8/154 (5%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYE-YVCNGSLDQHLSKHTRT-PLSWEKRMKI 78
E+++L +HENV+ LL + E Y+ + L+ ++ LS E +
Sbjct: 77 ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFL 136
Query: 79 ALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
+GL+Y+H IIHRD+ P+N+ V D E + DFGLA+ E+ TG V T
Sbjct: 137 VYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEM-----TGYVAT 191
Query: 139 LGYLAPE-YVECGKLSTKTDVYSFGVVLLQLITG 171
Y APE + + D++S G ++ +L+ G
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQG 225
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 79/154 (51%), Gaps = 3/154 (1%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTP-LSWEKRMKIA 79
E+++L RHEN++ + + Y+ ++ L K +T LS +
Sbjct: 73 EIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 132
Query: 80 LGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYS-TETGVVGT 138
+GL+Y+H N++HRD+ P+N+L+ + + DFGLA+ D D++ T V T
Sbjct: 133 YQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVAT 192
Query: 139 LGYLAPEYVECGKLSTKT-DVYSFGVVLLQLITG 171
Y APE + K TK+ D++S G +L ++++
Sbjct: 193 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 226
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 79/160 (49%), Gaps = 11/160 (6%)
Query: 16 REFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSL-DQHLSKHTRTPLSWEK 74
E +E+ +L H N++ L D LV E+ G L +Q +++H
Sbjct: 91 EEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAAN 150
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHD---FEPMLGDFGLAKTQREDSDYST 131
MK L G+ YLH++NI+HRD+ P NIL+ + + DFGL+ +D
Sbjct: 151 IMKQILS---GICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRD 207
Query: 132 ETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
+GT Y+APE ++ K + K DV+S GV++ L+ G
Sbjct: 208 R---LGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCG 243
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 60/104 (57%)
Query: 67 RTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQRED 126
+ P++ E + + A+G+++L IHRD+ NIL++ + + DFGLA+ ++
Sbjct: 193 KEPITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKN 252
Query: 127 SDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
DY + L ++APE + STK+DV+S+GV+L ++ +
Sbjct: 253 PDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 2 IAVKQHKDASSQGD-REFKSEVQVLSK-ARHENVVMLLGSCS-DGNKRLLVYEYVCNGSL 58
+AVK K+ ++ + + +E+++L+ H NVV LLG+C+ G +++ EY G+L
Sbjct: 60 VAVKMLKEGATASEYKALMTELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNL 119
Query: 59 DQHL 62
+L
Sbjct: 120 SNYL 123
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 96/226 (42%), Gaps = 34/226 (15%)
Query: 19 KSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSL-DQHLSKHTRTPLSWEKRMK 77
++E+ VL + H N++ L + LV E V G L D+ + K + +K
Sbjct: 96 RTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVK 155
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTH---DFEPMLGDFGLAKTQREDSDYSTETG 134
L A + YLHEN I+HRD+ P N+L D + DFGL+K T
Sbjct: 156 QILEA---VAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKT--- 209
Query: 135 VVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTNDKTLGEKGLVGWARPLLKE 194
V GT GY APE + + D++S G++ L+ G + P E
Sbjct: 210 VCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFE----------------PFYDE 253
Query: 195 RNYPDLIDPRIIDC-YDVHQLFW------MVQIAKKCLSKDPQKRL 233
R + RI++C Y +W + +K + DP+KRL
Sbjct: 254 RG-DQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRL 298
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 112/254 (44%), Gaps = 40/254 (15%)
Query: 4 VKQHKDASSQ---GDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+K+ + SS+ + + EV +L + +H NV+ L + +L+ E V G L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPM----LGD 116
L++ + L+ E+ + G+ YLH I H D+ P NI++ P + D
Sbjct: 104 FLAE--KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 117 FGLAKTQREDSDYSTE-TGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTN 175
FGLA D+ E + GT ++APE V L + D++S GV+ L++G
Sbjct: 162 FGLA----HKIDFGNEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSG---- 213
Query: 176 DKTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIA------KKCLSKDP 229
A P L + L + ++ Y+ ++ A ++ L KDP
Sbjct: 214 ------------ASPFLGDTKQETLANVSAVN-YEFEDEYFSNTSALAKDFIRRLLVKDP 260
Query: 230 QKRLPMDTVVDALK 243
+KR+ T+ D+L+
Sbjct: 261 KKRM---TIQDSLQ 271
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIA 79
+E +VL +RH + L S ++ V EY G L HLS R + E R +
Sbjct: 59 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLS---RERVFSEDRARF- 114
Query: 80 LGA--AKGLQYLH-ENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVV 136
GA L YLH E N+++RD+ N+++ D + DFGL K +D +T
Sbjct: 115 YGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG--ATMKXFC 172
Query: 137 GTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
GT YLAPE +E D + GVV+ +++ G
Sbjct: 173 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 207
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIA 79
+E +VL +RH + L S ++ V EY G L HLS R + E R +
Sbjct: 58 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLS---RERVFSEDRARF- 113
Query: 80 LGA--AKGLQYLH-ENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVV 136
GA L YLH E N+++RD+ N+++ D + DFGL K +D +T
Sbjct: 114 YGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG--ATMKXFC 171
Query: 137 GTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
GT YLAPE +E D + GVV+ +++ G
Sbjct: 172 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 206
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIA 79
+E +VL +RH + L S ++ V EY G L HLS R + E R +
Sbjct: 197 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLS---RERVFSEDRARF- 252
Query: 80 LGA--AKGLQYLH-ENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVV 136
GA L YLH E N+++RD+ N+++ D + DFGL K +D +T
Sbjct: 253 YGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG--ATMKTFC 310
Query: 137 GTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
GT YLAPE +E D + GVV+ +++ G
Sbjct: 311 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 345
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 75/154 (48%), Gaps = 8/154 (5%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYE-YVCNGSLDQHLSKHTRT-PLSWEKRMKI 78
E+++L +HENV+ LL + E Y+ + L+ + LS E +
Sbjct: 69 ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFL 128
Query: 79 ALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
+GL+Y+H IIHRD+ P+N+ V D E + DFGLA+ E+ TG V T
Sbjct: 129 VYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEM-----TGYVAT 183
Query: 139 LGYLAPE-YVECGKLSTKTDVYSFGVVLLQLITG 171
Y APE + + D++S G ++ +L+ G
Sbjct: 184 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQG 217
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIA 79
+E +VL +RH + L S ++ V EY G L HLS R + E R +
Sbjct: 57 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLS---RERVFSEDRARF- 112
Query: 80 LGA--AKGLQYLH-ENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVV 136
GA L YLH E N+++RD+ N+++ D + DFGL K +D +T
Sbjct: 113 YGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG--ATMKXFC 170
Query: 137 GTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
GT YLAPE +E D + GVV+ +++ G
Sbjct: 171 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 205
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 5/171 (2%)
Query: 1 MIAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
++A+KQ S +E E+ ++ + +VV GS +V EY GS+
Sbjct: 56 IVAIKQVPVESDL--QEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSD 113
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLA 120
+ +T L+ ++ I KGL+YLH IHRD+ NIL+ + L DFG+A
Sbjct: 114 IIRLRNKT-LTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVA 172
Query: 121 KTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
Q D + V+GT ++APE ++ + D++S G+ +++ G
Sbjct: 173 -GQLTDX-MAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEG 221
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIA 79
+E +VL +RH + L S ++ V EY G L HLS R + E R +
Sbjct: 200 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLS---RERVFSEDRARF- 255
Query: 80 LGA--AKGLQYLH-ENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVV 136
GA L YLH E N+++RD+ N+++ D + DFGL K +D +T
Sbjct: 256 YGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG--ATMKTFC 313
Query: 137 GTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
GT YLAPE +E D + GVV+ +++ G
Sbjct: 314 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 348
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 79/154 (51%), Gaps = 3/154 (1%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTP-LSWEKRMKIA 79
E+++L + RHEN++ + + Y+ ++ L K +T LS +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 134
Query: 80 LGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYS-TETGVVGT 138
+GL+Y+H N++HRD+ P+N+L+ + + DFGLA+ D D++ V T
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVAT 194
Query: 139 LGYLAPEYVECGKLSTKT-DVYSFGVVLLQLITG 171
Y APE + K TK+ D++S G +L ++++
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 228
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 79/154 (51%), Gaps = 3/154 (1%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTP-LSWEKRMKIA 79
E+++L + RHEN++ + + Y+ ++ L K +T LS +
Sbjct: 76 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 135
Query: 80 LGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYS-TETGVVGT 138
+GL+Y+H N++HRD+ P+N+L+ + + DFGLA+ D D++ V T
Sbjct: 136 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVAT 195
Query: 139 LGYLAPEYVECGKLSTKT-DVYSFGVVLLQLITG 171
Y APE + K TK+ D++S G +L ++++
Sbjct: 196 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 229
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 84/172 (48%), Gaps = 16/172 (9%)
Query: 4 VKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSL-DQHL 62
VKQ D S EVQ+L + H N+ L D LV E G L D+ +
Sbjct: 64 VKQKTDKES-----LLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEII 118
Query: 63 SKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILV---THDFEPMLGDFGL 119
S+ + + + ++ L G+ Y H+N I+HRD+ P N+L+ + D + DFGL
Sbjct: 119 SRKRFSEVDAARIIRQVLS---GITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGL 175
Query: 120 AKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
+ T E S + +GT Y+APE + G K DV+S GV+L L++G
Sbjct: 176 S-THFEASKKXKDK--IGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 223
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 6/153 (3%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIA 79
+E+ + + +VV G D + +V E SL L H R E +
Sbjct: 75 TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSL---LELHKRRKAVTEPEARYF 131
Query: 80 L-GAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
+ +G+QYLH N +IHRD+ N+ + D + +GDFGLA D + + + GT
Sbjct: 132 MRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKD--LCGT 189
Query: 139 LGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
Y+APE + S + D++S G +L L+ G
Sbjct: 190 PNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVG 222
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 79/154 (51%), Gaps = 3/154 (1%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTP-LSWEKRMKIA 79
E+++L + RHEN++ + + Y+ ++ L K + LS +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFL 134
Query: 80 LGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYS-TETGVVGT 138
+GL+Y+H N++HRD+ P+N+L+ + + DFGLA+ D D++ T V T
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 139 LGYLAPEYVECGKLSTKT-DVYSFGVVLLQLITG 171
Y APE + K TK+ D++S G +L ++++
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 228
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 90/214 (42%), Gaps = 19/214 (8%)
Query: 19 KSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKI 78
+ E+ VLS+ + GS K ++ EY+ GS L PL I
Sbjct: 65 QQEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKP---GPLEETYIATI 121
Query: 79 ALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
KGL YLH IHRD+ N+L++ + L DFG+A Q D+ VGT
Sbjct: 122 LREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVA-GQLTDTQIK-RNXFVGT 179
Query: 139 LGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTNDKTLGEKGLVGWARPLLKERNYP 198
++APE ++ K D++S G+ ++L G N + L L +N P
Sbjct: 180 PFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVL------FLIPKNSP 233
Query: 199 DLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQKR 232
++ + + + + CL+KDP+ R
Sbjct: 234 PTLEGQHSKPFK--------EFVEACLNKDPRFR 259
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 79/154 (51%), Gaps = 3/154 (1%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTP-LSWEKRMKIA 79
E+++L + RHEN++ + + Y+ + L K +T LS +
Sbjct: 91 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFL 150
Query: 80 LGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYS-TETGVVGT 138
+GL+Y+H N++HRD+ P+N+L+ + + DFGLA+ D D++ T V T
Sbjct: 151 YQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 210
Query: 139 LGYLAPEYVECGKLSTKT-DVYSFGVVLLQLITG 171
Y APE + K TK+ D++S G +L ++++
Sbjct: 211 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 244
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 73/163 (44%), Gaps = 27/163 (16%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYV----------CNGSLDQHLSKHTRTPL 70
E+ +L + +H+N+V L K LV+E+ CNG LD + K
Sbjct: 51 EICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVK------ 104
Query: 71 SWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKT-QREDSDY 129
KGL + H N++HRD+ P N+L+ + E L +FGLA+ Y
Sbjct: 105 ------SFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCY 158
Query: 130 STETGVVGTLGYLAPEYVECGKL-STKTDVYSFGVVLLQLITG 171
S E V TL Y P+ + KL ST D++S G + +L
Sbjct: 159 SAE---VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANA 198
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 6/153 (3%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIA 79
+E+ + + +VV G D + +V E SL L H R E +
Sbjct: 91 TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSL---LELHKRRKAVTEPEARYF 147
Query: 80 L-GAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
+ +G+QYLH N +IHRD+ N+ + D + +GDFGLA D + + + GT
Sbjct: 148 MRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKD--LCGT 205
Query: 139 LGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
Y+APE + S + D++S G +L L+ G
Sbjct: 206 PNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVG 238
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 78/158 (49%), Gaps = 16/158 (10%)
Query: 21 EVQVLSKARHENVVMLLG------SCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
E+++L +HENV+ LL S + N LV ++ L+ + T +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKXQKLTD---DH 126
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
+ +GL+Y+H +IIHRD+ P+N+ V D E + DFGLA+ ++ TG
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM-----TG 181
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLITG 171
V T Y APE + + D++S G ++ +L+TG
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 89/181 (49%), Gaps = 25/181 (13%)
Query: 7 HKDASSQGDREFKS---------EVQVLSKARHENVVMLLG------SCSDGNKRLLVYE 51
H+ A + R F+S E+++L +HENV+ LL S + N LV
Sbjct: 44 HRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTH 103
Query: 52 YVCNGSLDQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFE 111
+ G+ ++ K + L+ + + +GL+Y+H +IIHRD+ P+N+ V D E
Sbjct: 104 LM--GADLNNIVKCAK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE 159
Query: 112 PMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLIT 170
+ DFGLA+ ++ TG V T Y APE + + D++S G ++ +L+T
Sbjct: 160 LKILDFGLARHTDDEM-----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
Query: 171 G 171
G
Sbjct: 215 G 215
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 112/254 (44%), Gaps = 40/254 (15%)
Query: 4 VKQHKDASSQ---GDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+K+ + SS+ + + EV +L + +H NV+ L + +L+ E V G L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPM----LGD 116
L++ + L+ E+ + G+ YLH I H D+ P NI++ P + D
Sbjct: 104 FLAE--KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 117 FGLAKTQREDSDYSTE-TGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTN 175
FGLA D+ E + GT ++APE V L + D++S GV+ L++G
Sbjct: 162 FGLAHK----IDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG---- 213
Query: 176 DKTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIA------KKCLSKDP 229
A P L + L + ++ Y+ ++ A ++ L KDP
Sbjct: 214 ------------ASPFLGDTKQETLANVSAVN-YEFEDEYFSNTSALAKDFIRRLLVKDP 260
Query: 230 QKRLPMDTVVDALK 243
+KR+ T+ D+L+
Sbjct: 261 KKRM---TIQDSLQ 271
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 105/223 (47%), Gaps = 27/223 (12%)
Query: 19 KSEVQVLSKARHENVVMLLGSCSDGNKRL-LVYEYVCNGSLDQHLSKHTRTPLSWEKRMK 77
++E QVL R ++ L +L L+ +Y+ G L HLS+ R E ++
Sbjct: 106 RTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFT---EHEVQ 162
Query: 78 IALGA-AKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVV 136
I +G L++LH+ II+RD+ NIL+ + +L DFGL+K D +
Sbjct: 163 IYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVAD-ETERAYDFC 221
Query: 137 GTLGYLAPEYVECGKLS--TKTDVYSFGVVLLQLITGLK--TNDKTLGEK-GLVGWARPL 191
GT+ Y+AP+ V G D +S GV++ +L+TG T D GEK +R +
Sbjct: 222 GTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVD---GEKNSQAEISRRI 278
Query: 192 LK-ERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQKRL 233
LK E YP + D + ++ L KDP+KRL
Sbjct: 279 LKSEPPYPQEMSALAKD------------LIQRLLMKDPKKRL 309
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 80/156 (51%), Gaps = 13/156 (8%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSK---HTRTPLSWEKRMK 77
E+ +L + H N+V L+ LV+E+ +++ L K +T L + ++K
Sbjct: 69 EISLLKELHHPNIVSLIDVIHSERCLTLVFEF-----MEKDLKKVLDENKTGLQ-DSQIK 122
Query: 78 IAL-GAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVV 136
I L +G+ + H++ I+HRD+ P N+L+ D L DFGLA+ + T V
Sbjct: 123 IYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARA--FGIPVRSYTHEV 180
Query: 137 GTLGYLAPEYVE-CGKLSTKTDVYSFGVVLLQLITG 171
TL Y AP+ + K ST D++S G + ++ITG
Sbjct: 181 VTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITG 216
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 81/168 (48%), Gaps = 9/168 (5%)
Query: 8 KDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR 67
K S++ ++ + E ++ +H N+V L S S+ LV++ V G L + + R
Sbjct: 67 KKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIV--AR 124
Query: 68 TPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPM---LGDFGLA-KTQ 123
S + + ++H+++I+HRD+ P N+L+ + L DFGLA + Q
Sbjct: 125 EYYSEADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQ 184
Query: 124 REDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
E + G GT GYL+PE + D+++ GV+L L+ G
Sbjct: 185 GEQQAW---FGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 112/254 (44%), Gaps = 40/254 (15%)
Query: 4 VKQHKDASSQ---GDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+K+ + SS+ + + EV +L + +H NV+ L + +L+ E V G L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPM----LGD 116
L++ + L+ E+ + G+ YLH I H D+ P NI++ P + D
Sbjct: 104 FLAE--KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 117 FGLAKTQREDSDYSTE-TGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTN 175
FGLA D+ E + GT ++APE V L + D++S GV+ L++G
Sbjct: 162 FGLA----HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG---- 213
Query: 176 DKTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIA------KKCLSKDP 229
A P L + L + ++ Y+ ++ A ++ L KDP
Sbjct: 214 ------------ASPFLGDTKQETLANVSAVN-YEFEDEYFSNTSALAKDFIRRLLVKDP 260
Query: 230 QKRLPMDTVVDALK 243
+KR+ T+ D+L+
Sbjct: 261 KKRM---TIQDSLQ 271
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 75/154 (48%), Gaps = 8/154 (5%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYE-YVCNGSLDQHLSKHTRT-PLSWEKRMKI 78
E+++L +HENV+ LL + E Y+ + L+ + LS E +
Sbjct: 77 ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFL 136
Query: 79 ALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
+GL+Y+H IIHRD+ P+N+ V D E + DFGLA+ E+ TG V T
Sbjct: 137 VYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEM-----TGYVAT 191
Query: 139 LGYLAPE-YVECGKLSTKTDVYSFGVVLLQLITG 171
Y APE + + D++S G ++ +L+ G
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQG 225
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 6/153 (3%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIA 79
+E+ + + +VV G D + +V E SL L H R E +
Sbjct: 91 TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSL---LELHKRRKAVTEPEARYF 147
Query: 80 L-GAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
+ +G+QYLH N +IHRD+ N+ + D + +GDFGLA + + D + + GT
Sbjct: 148 MRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLA--TKIEFDGERKKXLCGT 205
Query: 139 LGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
Y+APE + S + D++S G +L L+ G
Sbjct: 206 PNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVG 238
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 6/153 (3%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIA 79
+E+ + + +VV G D + +V E SL L H R E +
Sbjct: 91 TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSL---LELHKRRKAVTEPEARYF 147
Query: 80 L-GAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
+ +G+QYLH N +IHRD+ N+ + D + +GDFGLA + + D + + GT
Sbjct: 148 MRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLA--TKIEFDGERKKTLCGT 205
Query: 139 LGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
Y+APE + S + D++S G +L L+ G
Sbjct: 206 PNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVG 238
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 32/168 (19%)
Query: 30 HENVV-MLLGS---CSDGN-KRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIALGAAK 84
H+N+ ++G +DG + LLV EY NGSL ++LS HT W ++A +
Sbjct: 66 HDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS---DWVSSCRLAHSVTR 122
Query: 85 GLQYLHEN---------NIIHRDMGPNNILVTHDFEPMLGDFGLA------KTQREDSDY 129
GL YLH I HRD+ N+LV +D ++ DFGL+ + R +
Sbjct: 123 GLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEED 182
Query: 130 STETGVVGTLGYLAPEYVECGKLSTK--------TDVYSFGVVLLQLI 169
+ VGT+ Y+APE +E G ++ + D+Y+ G++ ++
Sbjct: 183 NAAISEVGTIRYMAPEVLE-GAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 112/254 (44%), Gaps = 40/254 (15%)
Query: 4 VKQHKDASSQ---GDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+K+ + SS+ + + EV +L + +H NV+ L + +L+ E V G L
Sbjct: 43 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 102
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPM----LGD 116
L++ + L+ E+ + G+ YLH I H D+ P NI++ P + D
Sbjct: 103 FLAE--KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID 160
Query: 117 FGLAKTQREDSDYSTE-TGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTN 175
FGLA D+ E + GT ++APE V L + D++S GV+ L++G
Sbjct: 161 FGLAHK----IDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG---- 212
Query: 176 DKTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIA------KKCLSKDP 229
A P L + L + ++ Y+ ++ A ++ L KDP
Sbjct: 213 ------------ASPFLGDTKQETLANVSAVN-YEFEDEYFSNTSALAKDFIRRLLVKDP 259
Query: 230 QKRLPMDTVVDALK 243
+KR+ T+ D+L+
Sbjct: 260 KKRM---TIQDSLQ 270
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 112/254 (44%), Gaps = 40/254 (15%)
Query: 4 VKQHKDASSQ---GDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+K+ + SS+ + + EV +L + +H NV+ L + +L+ E V G L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPM----LGD 116
L++ + L+ E+ + G+ YLH I H D+ P NI++ P + D
Sbjct: 104 FLAE--KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 117 FGLAKTQREDSDYSTE-TGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTN 175
FGLA D+ E + GT ++APE V L + D++S GV+ L++G
Sbjct: 162 FGLAHK----IDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG---- 213
Query: 176 DKTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIA------KKCLSKDP 229
A P L + L + ++ Y+ ++ A ++ L KDP
Sbjct: 214 ------------ASPFLGDTKQETLANVSAVN-YEFEDEYFSNTSALAKDFIRRLLVKDP 260
Query: 230 QKRLPMDTVVDALK 243
+KR+ T+ D+L+
Sbjct: 261 KKRM---TIQDSLQ 271
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 80/156 (51%), Gaps = 13/156 (8%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSK---HTRTPLSWEKRMK 77
E+ +L + H N+V L+ LV+E+ +++ L K +T L + ++K
Sbjct: 69 EISLLKELHHPNIVSLIDVIHSERCLTLVFEF-----MEKDLKKVLDENKTGLQ-DSQIK 122
Query: 78 IAL-GAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVV 136
I L +G+ + H++ I+HRD+ P N+L+ D L DFGLA+ + T V
Sbjct: 123 IYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARA--FGIPVRSYTHEV 180
Query: 137 GTLGYLAPEYVE-CGKLSTKTDVYSFGVVLLQLITG 171
TL Y AP+ + K ST D++S G + ++ITG
Sbjct: 181 VTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITG 216
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 112/254 (44%), Gaps = 40/254 (15%)
Query: 4 VKQHKDASSQ---GDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+K+ + SS+ + + EV +L + +H NV+ L + +L+ E V G L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPM----LGD 116
L++ + L+ E+ + G+ YLH I H D+ P NI++ P + D
Sbjct: 104 FLAE--KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 117 FGLAKTQREDSDYSTE-TGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTN 175
FGLA D+ E + GT ++APE V L + D++S GV+ L++G
Sbjct: 162 FGLA----HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG---- 213
Query: 176 DKTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIA------KKCLSKDP 229
A P L + L + ++ Y+ ++ A ++ L KDP
Sbjct: 214 ------------ASPFLGDTKQETLANVSAVN-YEFEDEYFSNTSALAKDFIRRLLVKDP 260
Query: 230 QKRLPMDTVVDALK 243
+KR+ T+ D+L+
Sbjct: 261 KKRM---TIQDSLQ 271
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLL-VYEYVCNGSLDQHLSKHTRTPLSWEKRMKI 78
+E ++LS AR+ + L C RL V E+V G L H+ K R E R +
Sbjct: 72 TEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFD---EARARF 128
Query: 79 -ALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
A L +LH+ II+RD+ +N+L+ H+ L DFG+ K + T G
Sbjct: 129 YAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGI--CNGVTTATFCG 186
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T Y+APE ++ D ++ GV+L +++ G
Sbjct: 187 TPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCG 220
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 112/254 (44%), Gaps = 40/254 (15%)
Query: 4 VKQHKDASSQ---GDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+K+ + SS+ + + EV +L + +H NV+ L + +L+ E V G L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPM----LGD 116
L++ + L+ E+ + G+ YLH I H D+ P NI++ P + D
Sbjct: 104 FLAE--KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 117 FGLAKTQREDSDYSTE-TGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTN 175
FGLA D+ E + GT ++APE V L + D++S GV+ L++G
Sbjct: 162 FGLA----HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG---- 213
Query: 176 DKTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIA------KKCLSKDP 229
A P L + L + ++ Y+ ++ A ++ L KDP
Sbjct: 214 ------------ASPFLGDTKQETLANVSAVN-YEFEDEYFSNTSALAKDFIRRLLVKDP 260
Query: 230 QKRLPMDTVVDALK 243
+KR+ T+ D+L+
Sbjct: 261 KKRM---TIQDSLQ 271
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 112/254 (44%), Gaps = 40/254 (15%)
Query: 4 VKQHKDASSQ---GDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+K+ + SS+ + + EV +L + +H NV+ L + +L+ E V G L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPM----LGD 116
L++ + L+ E+ + G+ YLH I H D+ P NI++ P + D
Sbjct: 104 FLAE--KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 117 FGLAKTQREDSDYSTE-TGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTN 175
FGLA D+ E + GT ++APE V L + D++S GV+ L++G
Sbjct: 162 FGLAHK----IDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG---- 213
Query: 176 DKTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIA------KKCLSKDP 229
A P L + L + ++ Y+ ++ A ++ L KDP
Sbjct: 214 ------------ASPFLGDTKQETLANVSAVN-YEFEDEYFSNTSALAKDFIRRLLVKDP 260
Query: 230 QKRLPMDTVVDALK 243
+KR+ T+ D+L+
Sbjct: 261 KKRM---TIQDSLQ 271
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 112/254 (44%), Gaps = 40/254 (15%)
Query: 4 VKQHKDASSQ---GDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+K+ + SS+ + + EV +L + +H NV+ L + +L+ E V G L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPM----LGD 116
L++ + L+ E+ + G+ YLH I H D+ P NI++ P + D
Sbjct: 104 FLAE--KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 117 FGLAKTQREDSDYSTE-TGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTN 175
FGLA D+ E + GT ++APE V L + D++S GV+ L++G
Sbjct: 162 FGLA----HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG---- 213
Query: 176 DKTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIA------KKCLSKDP 229
A P L + L + ++ Y+ ++ A ++ L KDP
Sbjct: 214 ------------ASPFLGDTKQETLANVSAVN-YEFEDEYFSNTSALAKDFIRRLLVKDP 260
Query: 230 QKRLPMDTVVDALK 243
+KR+ T+ D+L+
Sbjct: 261 KKRM---TIQDSLQ 271
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 109/253 (43%), Gaps = 38/253 (15%)
Query: 4 VKQHKDASSQ---GDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+K+ + SS+ + + EV +L + +H NV+ L + +L+ E V G L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPM----LGD 116
L++ + L+ E+ + G+ YLH I H D+ P NI++ P + D
Sbjct: 104 FLAE--KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 117 FGLAKTQREDSDYSTE-TGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTN 175
FGLA D+ E + GT ++APE V L + D++S GV+ L++G
Sbjct: 162 FGLAHK----IDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG---- 213
Query: 176 DKTLGEKGLVGWARPLLKERNYPDLIDPRII-----DCYDVHQLFWMVQIAKKCLSKDPQ 230
A P L + L + + D Y + ++ L KDP+
Sbjct: 214 ------------ASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPK 261
Query: 231 KRLPMDTVVDALK 243
KR+ T+ D+L+
Sbjct: 262 KRM---TIQDSLQ 271
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 75/163 (46%), Gaps = 27/163 (16%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEY----------VCNGSLDQHLSKHTRTPL 70
E+ +L + +H N+V L + +LV+E+ VC G L+ +K
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAK------ 103
Query: 71 SWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKT-QREDSDY 129
L G+ Y H+ ++HRD+ P N+L+ + E + DFGLA+ Y
Sbjct: 104 ------SFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY 157
Query: 130 STETGVVGTLGYLAPEYVE-CGKLSTKTDVYSFGVVLLQLITG 171
+ E V TL Y AP+ + K ST D++S G + +++ G
Sbjct: 158 THE---VVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 89/181 (49%), Gaps = 25/181 (13%)
Query: 7 HKDASSQGDREFKS---------EVQVLSKARHENVVMLLG------SCSDGNKRLLVYE 51
H+ A + R F+S E+++L +HENV+ LL S + N LV
Sbjct: 44 HRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTH 103
Query: 52 YVCNGSLDQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFE 111
+ G+ ++ K + L+ + + +GL+Y+H +IIHRD+ P+N+ V D E
Sbjct: 104 LM--GADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE 159
Query: 112 PMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLIT 170
+ DFGLA+ ++ TG V T Y APE + + D++S G ++ +L+T
Sbjct: 160 LKILDFGLARHTDDEM-----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
Query: 171 G 171
G
Sbjct: 215 G 215
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 112/254 (44%), Gaps = 40/254 (15%)
Query: 4 VKQHKDASSQ---GDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+K+ + SS+ + + EV +L + +H NV+ L + +L+ E V G L
Sbjct: 43 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 102
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPM----LGD 116
L++ + L+ E+ + G+ YLH I H D+ P NI++ P + D
Sbjct: 103 FLAE--KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID 160
Query: 117 FGLAKTQREDSDYSTE-TGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTN 175
FGLA D+ E + GT ++APE V L + D++S GV+ L++G
Sbjct: 161 FGLAHK----IDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG---- 212
Query: 176 DKTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIA------KKCLSKDP 229
A P L + L + ++ Y+ ++ A ++ L KDP
Sbjct: 213 ------------ASPFLGDTKQETLANVSAVN-YEFEDEYFSNTSALAKDFIRRLLVKDP 259
Query: 230 QKRLPMDTVVDALK 243
+KR+ T+ D+L+
Sbjct: 260 KKRM---TIQDSLQ 270
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 109/253 (43%), Gaps = 38/253 (15%)
Query: 4 VKQHKDASSQ---GDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+K+ + SS+ + + EV +L + +H NV+ L + +L+ E V G L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPM----LGD 116
L++ + L+ E+ + G+ YLH I H D+ P NI++ P + D
Sbjct: 104 FLAE--KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 117 FGLAKTQREDSDYSTE-TGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTN 175
FGLA D+ E + GT ++APE V L + D++S GV+ L++G
Sbjct: 162 FGLAHK----IDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG---- 213
Query: 176 DKTLGEKGLVGWARPLLKERNYPDLIDPRII-----DCYDVHQLFWMVQIAKKCLSKDPQ 230
A P L + L + + D Y + ++ L KDP+
Sbjct: 214 ------------ASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPK 261
Query: 231 KRLPMDTVVDALK 243
KR+ T+ D+L+
Sbjct: 262 KRM---TIQDSLQ 271
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 75/163 (46%), Gaps = 27/163 (16%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEY----------VCNGSLDQHLSKHTRTPL 70
E+ +L + +H N+V L + +LV+E+ VC G L+ +K
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAK------ 103
Query: 71 SWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKT-QREDSDY 129
L G+ Y H+ ++HRD+ P N+L+ + E + DFGLA+ Y
Sbjct: 104 ------SFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY 157
Query: 130 STETGVVGTLGYLAPEYVE-CGKLSTKTDVYSFGVVLLQLITG 171
+ E V TL Y AP+ + K ST D++S G + +++ G
Sbjct: 158 THE---VVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 71/152 (46%), Gaps = 5/152 (3%)
Query: 21 EVQVLSKA-RHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIA 79
E +VLS A H + + + V EY+ G L H+ + LS + A
Sbjct: 68 EKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLS--RATFYA 125
Query: 80 LGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTL 139
GLQ+LH I++RD+ +NIL+ D + DFG+ K + E GT
Sbjct: 126 AEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNE--FCGTP 183
Query: 140 GYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
Y+APE + K + D +SFGV+L +++ G
Sbjct: 184 DYIAPEILLGQKYNHSVDWWSFGVLLYEMLIG 215
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 89/181 (49%), Gaps = 25/181 (13%)
Query: 7 HKDASSQGDREFKS---------EVQVLSKARHENVVMLLG------SCSDGNKRLLVYE 51
H+ A + R F+S E+++L +HENV+ LL S + N LV
Sbjct: 58 HRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTH 117
Query: 52 YVCNGSLDQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFE 111
+ G+ ++ K + L+ + + +GL+Y+H +IIHRD+ P+N+ V D E
Sbjct: 118 LM--GADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE 173
Query: 112 PMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLIT 170
+ DFGLA+ ++ TG V T Y APE + + D++S G ++ +L+T
Sbjct: 174 LKILDFGLARHTDDEM-----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 228
Query: 171 G 171
G
Sbjct: 229 G 229
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 78/158 (49%), Gaps = 16/158 (10%)
Query: 21 EVQVLSKARHENVVMLLG------SCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
E+++L +HENV+ LL S + N LV ++ L+ + T +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKXQKLTD---DH 126
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
+ +GL+Y+H +IIHRD+ P+N+ V D E + DFGLA+ ++ TG
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-----TG 181
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLITG 171
V T Y APE + + D++S G ++ +L+TG
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 89/181 (49%), Gaps = 25/181 (13%)
Query: 7 HKDASSQGDREFKS---------EVQVLSKARHENVVMLLG------SCSDGNKRLLVYE 51
H+ A + R F+S E+++L +HENV+ LL S + N LV
Sbjct: 48 HRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTH 107
Query: 52 YVCNGSLDQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFE 111
+ G+ ++ K + L+ + + +GL+Y+H +IIHRD+ P+N+ V D E
Sbjct: 108 LM--GADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE 163
Query: 112 PMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLIT 170
+ DFGLA+ ++ TG V T Y APE + + D++S G ++ +L+T
Sbjct: 164 LKILDFGLARHTDDEM-----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 171 G 171
G
Sbjct: 219 G 219
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 89/181 (49%), Gaps = 25/181 (13%)
Query: 7 HKDASSQGDREFKS---------EVQVLSKARHENVVMLLG------SCSDGNKRLLVYE 51
H+ A + R F+S E+++L +HENV+ LL S + N LV
Sbjct: 67 HRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTH 126
Query: 52 YVCNGSLDQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFE 111
+ G+ ++ K + L+ + + +GL+Y+H +IIHRD+ P+N+ V D E
Sbjct: 127 LM--GADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE 182
Query: 112 PMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLIT 170
+ DFGLA+ ++ TG V T Y APE + + D++S G ++ +L+T
Sbjct: 183 LKILDFGLARHTDDEM-----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 237
Query: 171 G 171
G
Sbjct: 238 G 238
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 67/152 (44%), Gaps = 6/152 (3%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIAL 80
EV+++ H N+V L LV EY G + +L H R E R K
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMK-EKEARAKFR- 120
Query: 81 GAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLG 140
+QY H+ I+HRD+ N+L+ D + DFG + + T G+
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPP 177
Query: 141 YLAPEYVECGKLST-KTDVYSFGVVLLQLITG 171
Y APE + K + DV+S GV+L L++G
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 82/158 (51%), Gaps = 16/158 (10%)
Query: 21 EVQVLSKARHENVVMLLG------SCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
E+++L +HENV+ LL S + N LV + G+ ++ K + L+ +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK--LTDDH 126
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
+ +GL+Y+H +IIHRD+ P+N+ V D E + DFGLA+ ++ TG
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-----TG 181
Query: 135 VVGTLGYLAPEYVECGKLSTKT-DVYSFGVVLLQLITG 171
V T Y APE + +T D++S G ++ +L+TG
Sbjct: 182 YVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 89/181 (49%), Gaps = 25/181 (13%)
Query: 7 HKDASSQGDREFKS---------EVQVLSKARHENVVMLLG------SCSDGNKRLLVYE 51
H+ A + R F+S E+++L +HENV+ LL S + N LV
Sbjct: 68 HRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTH 127
Query: 52 YVCNGSLDQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFE 111
+ G+ ++ K + L+ + + +GL+Y+H +IIHRD+ P+N+ V D E
Sbjct: 128 LM--GADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE 183
Query: 112 PMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLIT 170
+ DFGLA+ ++ TG V T Y APE + + D++S G ++ +L+T
Sbjct: 184 LKILDFGLARHTDDEM-----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 238
Query: 171 G 171
G
Sbjct: 239 G 239
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 105/239 (43%), Gaps = 37/239 (15%)
Query: 16 REFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKR 75
+ + EV +L + +H NV+ L + +L+ E V G L L++ + L+ E+
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE--KESLTEEEA 116
Query: 76 MKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPM----LGDFGLAKTQREDSDYST 131
+ G+ YLH I H D+ P NI++ P + DFGLA D+
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK----IDFGN 172
Query: 132 E-TGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTNDKTLGEKGLVGWARP 190
E + GT ++APE V L + D++S GV+ L++G A P
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG----------------ASP 216
Query: 191 LLKERNYPDLIDPRIIDCYDVHQLFWMVQIA------KKCLSKDPQKRLPMDTVVDALK 243
L + L + ++ Y+ ++ A ++ L KDP+KR+ T+ D+L+
Sbjct: 217 FLGDTKQETLANVSAVN-YEFEDEYFSNTSALAKDFIRRLLVKDPKKRM---TIQDSLQ 271
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 67/152 (44%), Gaps = 6/152 (3%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIAL 80
EV+++ H N+V L LV EY G + +L H R E R K
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMK-EKEARAKFR- 120
Query: 81 GAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLG 140
+QY H+ I+HRD+ N+L+ D + DFG + + T G+
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPP 177
Query: 141 YLAPEYVECGKLST-KTDVYSFGVVLLQLITG 171
Y APE + K + DV+S GV+L L++G
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 67/152 (44%), Gaps = 6/152 (3%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIAL 80
EV+++ H N+V L LV EY G + +L H R E R K
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMK-EKEARAKFR- 120
Query: 81 GAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLG 140
+QY H+ I+HRD+ N+L+ D + DFG + + T G+
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPP 177
Query: 141 YLAPEYVECGKLST-KTDVYSFGVVLLQLITG 171
Y APE + K + DV+S GV+L L++G
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 84/190 (44%), Gaps = 43/190 (22%)
Query: 7 HKDASSQGDREFKS---------EVQVLSKARHENVVMLLG------SCSDGNKRLLVYE 51
H+ A + R F+S E+++L +HENV+ LL S + N LV
Sbjct: 54 HRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTH 113
Query: 52 YV---------CNGSLDQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPN 102
+ C D H+ + +GL+Y+H +IIHRD+ P+
Sbjct: 114 LMGADLNNIVKCQKLTDDHVQF-------------LIYQILRGLKYIHSADIIHRDLKPS 160
Query: 103 NILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPE-YVECGKLSTKTDVYSF 161
N+ V D E + DFGLA+ ++ TG V T Y APE + + D++S
Sbjct: 161 NLAVNEDCELKILDFGLARHTDDEM-----TGYVATRWYRAPEIMLNWMHYNQTVDIWSV 215
Query: 162 GVVLLQLITG 171
G ++ +L+TG
Sbjct: 216 GCIMAELLTG 225
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 67/152 (44%), Gaps = 6/152 (3%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIAL 80
EV+++ H N+V L LV EY G + +L H R E R K
Sbjct: 64 EVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMK-EKEARAKFR- 121
Query: 81 GAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLG 140
+QY H+ I+HRD+ N+L+ D + DFG + + T G+
Sbjct: 122 QIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDT---FCGSPP 178
Query: 141 YLAPEYVECGKLST-KTDVYSFGVVLLQLITG 171
Y APE + K + DV+S GV+L L++G
Sbjct: 179 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 27/163 (16%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEY----------VCNGSLDQHLSKHTRTPL 70
E+ +L + +H N+V L + +LV+E+ VC G L+ +K
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAK------ 103
Query: 71 SWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKT-QREDSDY 129
L G+ Y H+ ++HRD+ P N+L+ + E + DFGLA+ Y
Sbjct: 104 ------SFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY 157
Query: 130 STETGVVGTLGYLAPEYVE-CGKLSTKTDVYSFGVVLLQLITG 171
+ E + TL Y AP+ + K ST D++S G + +++ G
Sbjct: 158 THE---IVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIA 79
+E Q+L K VV L + + LV + G L H+ + + + A
Sbjct: 233 NEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYA 292
Query: 80 LGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTL 139
GL+ LH I++RD+ P NIL+ + D GLA E T G VGT+
Sbjct: 293 AEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG---QTIKGRVGTV 349
Query: 140 GYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
GY+APE V+ + + D ++ G +L ++I G
Sbjct: 350 GYMAPEVVKNERYTFSPDWWALGCLLYEMIAG 381
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIA 79
+E Q+L K VV L + + LV + G L H+ + + + A
Sbjct: 233 NEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYA 292
Query: 80 LGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTL 139
GL+ LH I++RD+ P NIL+ + D GLA E T G VGT+
Sbjct: 293 AEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG---QTIKGRVGTV 349
Query: 140 GYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
GY+APE V+ + + D ++ G +L ++I G
Sbjct: 350 GYMAPEVVKNERYTFSPDWWALGCLLYEMIAG 381
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 16/158 (10%)
Query: 21 EVQVLSKARHENVVMLLG------SCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
E+++L +HENV+ LL S + N LV + G+ ++ K + L+ +
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK--LTDDH 131
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
+ +GL+Y+H +IIHRD+ P+N+ V D E + DFGLA+ ++ TG
Sbjct: 132 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM-----TG 186
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLITG 171
V T Y APE + + D++S G ++ +L+TG
Sbjct: 187 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 16/158 (10%)
Query: 21 EVQVLSKARHENVVMLLG------SCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
E+++L +HENV+ LL S + N LV + G+ ++ K + L+ +
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK--LTDDH 131
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
+ +GL+Y+H +IIHRD+ P+N+ V D E + DFGLA+ ++ TG
Sbjct: 132 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM-----TG 186
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLITG 171
V T Y APE + + D++S G ++ +L+TG
Sbjct: 187 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 16/158 (10%)
Query: 21 EVQVLSKARHENVVMLLG------SCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
E+++L +HENV+ LL S + N LV + G+ ++ K + L+ +
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK--LTDDH 133
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
+ +GL+Y+H +IIHRD+ P+N+ V D E + DFGLA+ ++ TG
Sbjct: 134 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEM-----TG 188
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLITG 171
V T Y APE + + D++S G ++ +L+TG
Sbjct: 189 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 31/197 (15%)
Query: 1 MIAVKQHKDA---SSQGDREFKSEVQVLSK-ARHENVVMLLGSCSDGNKR--LLVYEYVC 54
++AVK+ DA S+ R F+ E+ +L++ + HEN+V LL N R LV++Y+
Sbjct: 36 VVAVKKIFDAFQNSTDAQRTFR-EIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYM- 93
Query: 55 NGSLDQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPML 114
L + + P+ + + K ++YLH ++HRDM P+NIL+ + +
Sbjct: 94 ETDLHAVIRANILEPVH---KQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKV 150
Query: 115 GDFGLAK-------------------TQREDSDYSTETGVVGTLGYLAPEYVECGKLSTK 155
DFGL++ T+ D D T V T Y APE + TK
Sbjct: 151 ADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTK 210
Query: 156 -TDVYSFGVVLLQLITG 171
D++S G +L +++ G
Sbjct: 211 GIDMWSLGCILGEILCG 227
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 112/254 (44%), Gaps = 40/254 (15%)
Query: 4 VKQHKDASSQ---GDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
+K+ + SS+ + + EV +L + +H NV+ L + +L+ E V G L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFD 103
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPM----LGD 116
L++ + L+ E+ + G+ YLH I H D+ P NI++ P + D
Sbjct: 104 FLAE--KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 117 FGLAKTQREDSDYSTE-TGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTN 175
FGLA D+ E + GT ++APE V L + D++S GV+ L++G
Sbjct: 162 FGLAHK----IDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG---- 213
Query: 176 DKTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIA------KKCLSKDP 229
A P L + L + ++ Y+ ++ A ++ L KDP
Sbjct: 214 ------------ASPFLGDTKQETLANVSAVN-YEFEDEYFSNTSALAKDFIRRLLVKDP 260
Query: 230 QKRLPMDTVVDALK 243
+KR+ T+ D+L+
Sbjct: 261 KKRM---TIQDSLQ 271
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 16/158 (10%)
Query: 21 EVQVLSKARHENVVMLLG------SCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
E+++L +HENV+ LL S + N LV + G+ ++ K + L+ +
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK--LTDDH 133
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
+ +GL+Y+H +IIHRD+ P+N+ V D E + DFGLA+ ++ TG
Sbjct: 134 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEM-----TG 188
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLITG 171
V T Y APE + + D++S G ++ +L+TG
Sbjct: 189 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 16/158 (10%)
Query: 21 EVQVLSKARHENVVMLLG------SCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
E+++L +HENV+ LL S + N LV + G+ ++ K + L+ +
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK--LTDDH 133
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
+ +GL+Y+H +IIHRD+ P+N+ V D E + DFGLA+ ++ TG
Sbjct: 134 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEM-----TG 188
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLITG 171
V T Y APE + + D++S G ++ +L+TG
Sbjct: 189 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 16/158 (10%)
Query: 21 EVQVLSKARHENVVMLLG------SCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
E+++L +HENV+ LL S + N LV + G+ ++ K + L+ +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK--LTDDH 126
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
+ +GL+Y+H +IIHRD+ P+N+ V D E + DFGLA+ ++ TG
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-----TG 181
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLITG 171
V T Y APE + + D++S G ++ +L+TG
Sbjct: 182 XVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 66/152 (43%), Gaps = 6/152 (3%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIAL 80
EV+++ H N+V L L+ EY G + +L H R E R K
Sbjct: 61 EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMK-EKEARSKFR- 118
Query: 81 GAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLG 140
+QY H+ I+HRD+ N+L+ D + DFG + T G+
Sbjct: 119 QIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDT---FCGSPP 175
Query: 141 YLAPEYVECGKLST-KTDVYSFGVVLLQLITG 171
Y APE + K + DV+S GV+L L++G
Sbjct: 176 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 207
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 16/158 (10%)
Query: 21 EVQVLSKARHENVVMLLG------SCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
E+++L +HENV+ LL S + N LV + G+ ++ K + L+ +
Sbjct: 100 ELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLM--GADLNNIVKCQK--LTDDH 155
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
+ +GL+Y+H +IIHRD+ P+N+ V D E + DFGLA+ ++ TG
Sbjct: 156 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-----TG 210
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLITG 171
V T Y APE + + D++S G ++ +L+TG
Sbjct: 211 YVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTG 248
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 16/158 (10%)
Query: 21 EVQVLSKARHENVVMLLG------SCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
E+++L +HENV+ LL S + N LV + G+ ++ K + L+ +
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK--LTDDH 122
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
+ +GL+Y+H +IIHRD+ P+N+ V D E + DFGLA+ ++ TG
Sbjct: 123 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-----TG 177
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLITG 171
V T Y APE + + D++S G ++ +L+TG
Sbjct: 178 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 16/158 (10%)
Query: 21 EVQVLSKARHENVVMLLG------SCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
E+++L +HENV+ LL S + N LV + G+ ++ K + L+ +
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK--LTDDH 133
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
+ +GL+Y+H +IIHRD+ P+N+ V D E + DFGLA+ ++ TG
Sbjct: 134 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-----TG 188
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLITG 171
V T Y APE + + D++S G ++ +L+TG
Sbjct: 189 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 16/158 (10%)
Query: 21 EVQVLSKARHENVVMLLG------SCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
E+++L +HENV+ LL S + N LV + G+ ++ K + L+ +
Sbjct: 68 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK--LTDDH 123
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
+ +GL+Y+H +IIHRD+ P+N+ V D E + DFGLA+ ++ TG
Sbjct: 124 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-----TG 178
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLITG 171
V T Y APE + + D++S G ++ +L+TG
Sbjct: 179 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 216
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 16/158 (10%)
Query: 21 EVQVLSKARHENVVMLLG------SCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
E+++L +HENV+ LL S + N LV + G+ ++ K + L+ +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK--LTDDH 126
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
+ +GL+Y+H +IIHRD+ P+N+ V D E + DFGLA+ ++ TG
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-----TG 181
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLITG 171
V T Y APE + + D++S G ++ +L+TG
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 73/160 (45%), Gaps = 12/160 (7%)
Query: 15 DREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
+ + + E+++ + H N++ L D + L+ EY G L + L K ++
Sbjct: 67 EHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQK--SCTFDEQR 124
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGL---AKTQREDSDYST 131
I A L Y H +IHRD+ P N+L+ E + DFG A + R +
Sbjct: 125 TATIMEELADALMYCHGKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKT---- 180
Query: 132 ETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
+ GTL YL PE +E + K D++ GV+ +L+ G
Sbjct: 181 ---MCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 16/158 (10%)
Query: 21 EVQVLSKARHENVVMLLG------SCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
E+++L +HENV+ LL S + N LV + G+ ++ K + L+ +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK--LTDDH 126
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
+ +GL+Y+H +IIHRD+ P+N+ V D E + DFGLA+ ++ TG
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-----TG 181
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLITG 171
V T Y APE + + D++S G ++ +L+TG
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 16/158 (10%)
Query: 21 EVQVLSKARHENVVMLLG------SCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
E+++L +HENV+ LL S + N LV + G+ ++ K + L+ +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK--LTDDH 126
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
+ +GL+Y+H +IIHRD+ P+N+ V D E + DFGLA+ ++ TG
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-----TG 181
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLITG 171
V T Y APE + + D++S G ++ +L+TG
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 16/158 (10%)
Query: 21 EVQVLSKARHENVVMLLG------SCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
E+++L +HENV+ LL S + N LV + G+ ++ K + L+ +
Sbjct: 82 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK--LTDDH 137
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
+ +GL+Y+H +IIHRD+ P+N+ V D E + DFGLA+ ++ TG
Sbjct: 138 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM-----TG 192
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLITG 171
V T Y APE + + D++S G ++ +L+TG
Sbjct: 193 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 230
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 16/158 (10%)
Query: 21 EVQVLSKARHENVVMLLG------SCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
E+++L +HENV+ LL S + N LV + G+ ++ K + L+ +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK--LTDDH 126
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
+ +GL+Y+H +IIHRD+ P+N+ V D E + DFGLA+ ++ TG
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-----TG 181
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLITG 171
V T Y APE + + D++S G ++ +L+TG
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 16/158 (10%)
Query: 21 EVQVLSKARHENVVMLLG------SCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
E+++L +HENV+ LL S + N LV + G+ ++ K + L+ +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK--LTDDH 126
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
+ +GL+Y+H +IIHRD+ P+N+ V D E + DFGLA+ ++ TG
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-----TG 181
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLITG 171
V T Y APE + + D++S G ++ +L+TG
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 16/158 (10%)
Query: 21 EVQVLSKARHENVVMLLG------SCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
E+++L +HENV+ LL S + N LV + G+ ++ K + L+ +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK--LTDDH 126
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
+ +GL+Y+H +IIHRD+ P+N+ V D E + DFGLA+ ++ TG
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-----TG 181
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLITG 171
V T Y APE + + D++S G ++ +L+TG
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 16/158 (10%)
Query: 21 EVQVLSKARHENVVMLLG------SCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
E+++L +HENV+ LL S + N LV + G+ ++ K + L+ +
Sbjct: 68 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK--LTDDH 123
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
+ +GL+Y+H +IIHRD+ P+N+ V D E + DFGLA+ ++ TG
Sbjct: 124 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-----TG 178
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLITG 171
V T Y APE + + D++S G ++ +L+TG
Sbjct: 179 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 216
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 16/158 (10%)
Query: 21 EVQVLSKARHENVVMLLG------SCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
E+++L +HENV+ LL S + N LV + G+ ++ K + L+ +
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK--LTDDH 131
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
+ +GL+Y+H +IIHRD+ P+N+ V D E + DFGLA+ ++ TG
Sbjct: 132 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-----TG 186
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLITG 171
V T Y APE + + D++S G ++ +L+TG
Sbjct: 187 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 16/158 (10%)
Query: 21 EVQVLSKARHENVVMLLG------SCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
E+++L +HENV+ LL S + N LV + G+ ++ K + L+ +
Sbjct: 70 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK--LTDDH 125
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
+ +GL+Y+H +IIHRD+ P+N+ V D E + DFGLA+ ++ TG
Sbjct: 126 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-----TG 180
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLITG 171
V T Y APE + + D++S G ++ +L+TG
Sbjct: 181 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 218
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 16/158 (10%)
Query: 21 EVQVLSKARHENVVMLLG------SCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
E+++L +HENV+ LL S + N LV + G+ ++ K + L+ +
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK--LTDDH 131
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
+ +GL+Y+H +IIHRD+ P+N+ V D E + DFGLA+ ++ TG
Sbjct: 132 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-----TG 186
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLITG 171
V T Y APE + + D++S G ++ +L+TG
Sbjct: 187 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 16/158 (10%)
Query: 21 EVQVLSKARHENVVMLLG------SCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
E+++L +HENV+ LL S + N LV + G+ ++ K + L+ +
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK--LTDDH 128
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
+ +GL+Y+H +IIHRD+ P+N+ V D E + DFGLA+ ++ TG
Sbjct: 129 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-----TG 183
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLITG 171
V T Y APE + + D++S G ++ +L+TG
Sbjct: 184 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 67/152 (44%), Gaps = 6/152 (3%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIAL 80
EV+++ H N+V L LV EY G + +L H R E R K
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMK-EKEARAKFR- 120
Query: 81 GAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLG 140
+QY H+ I+HRD+ N+L+ D + DFG + E + + G
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN---EFTFGNKLDAFCGAPP 177
Query: 141 YLAPEYVECGKLST-KTDVYSFGVVLLQLITG 171
Y APE + K + DV+S GV+L L++G
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 16/158 (10%)
Query: 21 EVQVLSKARHENVVMLLG------SCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
E+++L +HENV+ LL S + N LV + G+ ++ K + L+ +
Sbjct: 69 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK--LTDDH 124
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
+ +GL+Y+H +IIHRD+ P+N+ V D E + DFGLA+ ++ TG
Sbjct: 125 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-----TG 179
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLITG 171
V T Y APE + + D++S G ++ +L+TG
Sbjct: 180 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 217
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 16/158 (10%)
Query: 21 EVQVLSKARHENVVMLLG------SCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
E+++L +HENV+ LL S + N LV + G+ ++ K + L+ +
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK--LTDDH 128
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
+ +GL+Y+H +IIHRD+ P+N+ V D E + DFGLA+ ++ TG
Sbjct: 129 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-----TG 183
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLITG 171
V T Y APE + + D++S G ++ +L+TG
Sbjct: 184 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 6/153 (3%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYE--YVCNGSLDQHLSKHTRTPLSWEKRMKI 78
E+ ++ H+N++ LL + K L ++ Y+ +D +LS+ + L E+ +
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTP-QKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYL 131
Query: 79 ALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
G+++LH IIHRD+ P+NI+V D + DFGLA+T T V T
Sbjct: 132 LYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTA---GTSFMMTPYVVT 188
Query: 139 LGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
Y APE + D++S GV++ ++I G
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 16/158 (10%)
Query: 21 EVQVLSKARHENVVMLLG------SCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
E+++L +HENV+ LL S + N LV + G+ ++ K + L+ +
Sbjct: 83 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK--LTDDH 138
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
+ +GL+Y+H +IIHRD+ P+N+ V D E + DFGLA+ ++ TG
Sbjct: 139 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-----TG 193
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLITG 171
V T Y APE + + D++S G ++ +L+TG
Sbjct: 194 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 231
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 16/158 (10%)
Query: 21 EVQVLSKARHENVVMLLG------SCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
E+++L +HENV+ LL S + N LV + G+ ++ K + L+ +
Sbjct: 83 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK--LTDDH 138
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
+ +GL+Y+H +IIHRD+ P+N+ V D E + DFGLA+ ++ TG
Sbjct: 139 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-----TG 193
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLITG 171
V T Y APE + + D++S G ++ +L+TG
Sbjct: 194 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 231
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 16/158 (10%)
Query: 21 EVQVLSKARHENVVMLLG------SCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
E+++L +HENV+ LL S + N LV + G+ ++ K + L+ +
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK--LTDDH 132
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
+ +GL+Y+H +IIHRD+ P+N+ V D E + DFGLA+ ++ TG
Sbjct: 133 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-----TG 187
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLITG 171
V T Y APE + + D++S G ++ +L+TG
Sbjct: 188 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 16/158 (10%)
Query: 21 EVQVLSKARHENVVMLLG------SCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
E+++L +HENV+ LL S + N LV + G+ ++ K + L+ +
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK--LTDDH 132
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
+ +GL+Y+H +IIHRD+ P+N+ V D E + DFGLA+ ++ TG
Sbjct: 133 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-----TG 187
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLITG 171
V T Y APE + + D++S G ++ +L+TG
Sbjct: 188 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 16/158 (10%)
Query: 21 EVQVLSKARHENVVMLLG------SCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
E+++L +HENV+ LL S + N LV + G+ ++ K + L+ +
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK--LTDDH 132
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
+ +GL+Y+H +IIHRD+ P+N+ V D E + DFGLA+ ++ TG
Sbjct: 133 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEM-----TG 187
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLITG 171
V T Y APE + + D++S G ++ +L+TG
Sbjct: 188 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 68/159 (42%), Gaps = 20/159 (12%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIAL 80
EV+++ H N+V L L+ EY G + +L H R E R K
Sbjct: 64 EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMK-EKEARSKFR- 121
Query: 81 GAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLG 140
+QY H+ I+HRD+ N+L+ D + DFG +S E V G L
Sbjct: 122 QIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFG----------FSNEFTVGGKLD 171
Query: 141 -------YLAPEYVECGKLST-KTDVYSFGVVLLQLITG 171
Y APE + K + DV+S GV+L L++G
Sbjct: 172 AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 16/158 (10%)
Query: 21 EVQVLSKARHENVVMLLG------SCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
E+++L +HENV+ LL S + N LV + G+ ++ K + L+ +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK--LTDDH 126
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
+ +GL+Y+H +IIHRD+ P+N+ V D E + DFGLA+ ++ TG
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-----TG 181
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLITG 171
V T Y APE + + D++S G ++ +L+TG
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 16/158 (10%)
Query: 21 EVQVLSKARHENVVMLLG------SCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
E+++L +HENV+ LL S + N LV + G+ ++ K + L+ +
Sbjct: 82 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK--LTDDH 137
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
+ +GL+Y+H +IIHRD+ P+N+ V D E + DFGLA+ ++ TG
Sbjct: 138 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-----TG 192
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLITG 171
V T Y APE + + D++S G ++ +L+TG
Sbjct: 193 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 230
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 5/152 (3%)
Query: 21 EVQVLSKA-RHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIA 79
E +VLS A H + + + V EY+ G L H+ + LS + A
Sbjct: 67 EKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLS--RATFYA 124
Query: 80 LGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTL 139
GLQ+LH I++RD+ +NIL+ D + DFG+ K + GT
Sbjct: 125 AEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD--AKTNXFCGTP 182
Query: 140 GYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
Y+APE + K + D +SFGV+L +++ G
Sbjct: 183 DYIAPEILLGQKYNHSVDWWSFGVLLYEMLIG 214
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 16/158 (10%)
Query: 21 EVQVLSKARHENVVMLLG------SCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
E+++L +HENV+ LL S + N LV + G+ ++ K + L+ +
Sbjct: 83 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK--LTDDH 138
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
+ +GL+Y+H +IIHRD+ P+N+ V D E + DFGLA+ ++ TG
Sbjct: 139 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-----TG 193
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLITG 171
V T Y APE + + D++S G ++ +L+TG
Sbjct: 194 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 231
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 16/158 (10%)
Query: 21 EVQVLSKARHENVVMLLG------SCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
E+++L +HENV+ LL S + N LV + G+ ++ K + L+ +
Sbjct: 91 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK--LTDDH 146
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
+ +GL+Y+H +IIHRD+ P+N+ V D E + DFGLA+ ++ TG
Sbjct: 147 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-----TG 201
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLITG 171
V T Y APE + + D++S G ++ +L+TG
Sbjct: 202 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 239
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 16/158 (10%)
Query: 21 EVQVLSKARHENVVMLLG------SCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
E+++L +HENV+ LL S + N LV + G+ ++ K + L+ +
Sbjct: 90 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK--LTDDH 145
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
+ +GL+Y+H +IIHRD+ P+N+ V D E + DFGLA+ ++ TG
Sbjct: 146 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-----TG 200
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLITG 171
V T Y APE + + D++S G ++ +L+TG
Sbjct: 201 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 238
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 6/153 (3%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYE--YVCNGSLDQHLSKHTRTPLSWEKRMKI 78
E+ ++ H+N++ LL + K L ++ Y+ +D +LS+ + L E+ +
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTP-QKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYL 131
Query: 79 ALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
G+++LH IIHRD+ P+NI+V D + DFGLA+T T V T
Sbjct: 132 LYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTA---GTSFMMTPYVVT 188
Query: 139 LGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
Y APE + D++S GV++ ++I G
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 16/158 (10%)
Query: 21 EVQVLSKARHENVVMLLG------SCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
E+++L +HENV+ LL S + N LV + G+ ++ K + L+ +
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK--LTDDH 128
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
+ +GL+Y+H +IIHRD+ P+N+ V D E + DFGLA+ ++ TG
Sbjct: 129 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEM-----TG 183
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLITG 171
V T Y APE + + D++S G ++ +L+TG
Sbjct: 184 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 16/158 (10%)
Query: 21 EVQVLSKARHENVVMLLG------SCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
E+++L +HENV+ LL S + N LV + G+ ++ K + L+ +
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK--LTDDH 128
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
+ +GL+Y+H +IIHRD+ P+N+ V D E + DFGLA+ ++ TG
Sbjct: 129 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-----TG 183
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLITG 171
V T Y APE + + D++S G ++ +L+TG
Sbjct: 184 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 16/158 (10%)
Query: 21 EVQVLSKARHENVVMLLG------SCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
E+++L +HENV+ LL S + N LV + G+ ++ K + L+ +
Sbjct: 94 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK--LTDDH 149
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
+ +GL+Y+H +IIHRD+ P+N+ V D E + DFGLA+ ++ TG
Sbjct: 150 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-----TG 204
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLITG 171
V T Y APE + + D++S G ++ +L+TG
Sbjct: 205 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 242
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 88/181 (48%), Gaps = 25/181 (13%)
Query: 7 HKDASSQGDREFKS---------EVQVLSKARHENVVMLLG------SCSDGNKRLLVYE 51
H+ A + R F+S E+++L +HENV+ LL S + N LV
Sbjct: 44 HRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTH 103
Query: 52 YVCNGSLDQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFE 111
+ G+ ++ K + L+ + + +GL+Y+H +IIHRD+ P+N+ V D E
Sbjct: 104 LM--GADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE 159
Query: 112 PMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLIT 170
+ DFGLA+ ++ G V T Y APE + + D++S G ++ +L+T
Sbjct: 160 LKILDFGLARHTDDEM-----AGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
Query: 171 G 171
G
Sbjct: 215 G 215
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 88/181 (48%), Gaps = 25/181 (13%)
Query: 7 HKDASSQGDREFKS---------EVQVLSKARHENVVMLLG------SCSDGNKRLLVYE 51
H+ A + R F+S E+++L +HENV+ LL S + N LV
Sbjct: 48 HRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTH 107
Query: 52 YVCNGSLDQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFE 111
+ G+ ++ K + L+ + + +GL+Y+H +IIHRD+ P+N+ V D E
Sbjct: 108 LM--GADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE 163
Query: 112 PMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLIT 170
+ DFGLA+ ++ G V T Y APE + + D++S G ++ +L+T
Sbjct: 164 LKILDFGLARHTDDEM-----AGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 171 G 171
G
Sbjct: 219 G 219
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 88/181 (48%), Gaps = 25/181 (13%)
Query: 7 HKDASSQGDREFKS---------EVQVLSKARHENVVMLLG------SCSDGNKRLLVYE 51
H+ A + R F+S E+++L +HENV+ LL S + N LV
Sbjct: 48 HRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTH 107
Query: 52 YVCNGSLDQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFE 111
+ G+ ++ K + L+ + + +GL+Y+H +IIHRD+ P+N+ V D E
Sbjct: 108 LM--GADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE 163
Query: 112 PMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLIT 170
+ DFGLA+ ++ G V T Y APE + + D++S G ++ +L+T
Sbjct: 164 LKILDFGLARHTDDEM-----AGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 171 G 171
G
Sbjct: 219 G 219
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 80/176 (45%), Gaps = 22/176 (12%)
Query: 6 QHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKR----LLVYEYVCNGSLDQH 61
Q + + + FK E + L +H N+V S K +LV E +G+L +
Sbjct: 60 QDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTY 119
Query: 62 LSKHTRTPL----SWEKRMKIALGAAKGLQYLHENN--IIHRDMGPNNILVTHDFEPM-L 114
L + + SW +++ KGLQ+LH IIHRD+ +NI +T + +
Sbjct: 120 LKRFKVXKIKVLRSWCRQI------LKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKI 173
Query: 115 GDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
GD GLA +R S V+GT + APE E K DVY+FG L+ T
Sbjct: 174 GDLGLATLKRA----SFAKAVIGTPEFXAPEXYE-EKYDESVDVYAFGXCXLEXAT 224
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 87/175 (49%), Gaps = 18/175 (10%)
Query: 5 KQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSK 64
K H++ S F ++SK H+++V+ G C G++ +LV E+V GSLD +L K
Sbjct: 50 KAHRNYSES----FFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKK 105
Query: 65 HTRT-PLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQ 123
+ + W ++++A A + +L EN +IH ++ NIL+ + + G+ K
Sbjct: 106 NKNCINILW--KLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKL- 162
Query: 124 REDSDYSTETGVVGT------LGYLAPEYVECGK-LSTKTDVYSFGVVLLQLITG 171
SD V+ + ++ PE +E K L+ TD +SFG L ++ +G
Sbjct: 163 ---SDPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 68/152 (44%), Gaps = 6/152 (3%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIAL 80
EV+++ H N+V L LV EY G + +L H R E R K
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMK-EKEARAKFR- 120
Query: 81 GAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLG 140
+QY H+ I+HRD+ N+L+ D + DFG + E + + G+
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN---EFTFGNKLDEFCGSPP 177
Query: 141 YLAPEYVECGKLST-KTDVYSFGVVLLQLITG 171
Y APE + K + DV+S GV+L L++G
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 76/167 (45%), Gaps = 7/167 (4%)
Query: 8 KDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR 67
K S++ ++ + E ++ +H N+V L S S+ LV++ V G L + + R
Sbjct: 40 KKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIV--AR 97
Query: 68 TPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPM---LGDFGLAKTQR 124
S + + + H N I+HRD+ P N+L+ + L DFGLA +
Sbjct: 98 EYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQ 157
Query: 125 EDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
D G GT GYL+PE + D+++ GV+L L+ G
Sbjct: 158 --GDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 11/158 (6%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLL--VYEYVCNGSLDQHLSKHT--RTPLSWEKR 75
SEV +L + +H N+V D L V EY G L ++K T R L E
Sbjct: 54 SEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV 113
Query: 76 MKIALGAAKGLQYLHE-----NNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYS 130
+++ L+ H + ++HRD+ P N+ + LGDFGLA+ D+ ++
Sbjct: 114 LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFA 173
Query: 131 TETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQL 168
VGT Y++PE + + K+D++S G +L +L
Sbjct: 174 --KAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 76/157 (48%), Gaps = 8/157 (5%)
Query: 21 EVQVLSKARHENVVML---LGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMK 77
E+++L +H+N++ + L + VY + D H H+ PL+ E
Sbjct: 104 ELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRY 163
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK---TQREDSDYSTETG 134
+GL+Y+H +IHRD+ P+N+LV + E +GDFG+A+ T + Y T
Sbjct: 164 FLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFM-TE 222
Query: 135 VVGTLGYLAPEY-VECGKLSTKTDVYSFGVVLLQLIT 170
V T Y APE + + + D++S G + +++
Sbjct: 223 YVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLA 259
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 22/169 (13%)
Query: 16 REFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKR 75
+ FK EV + RHENVV+ +G+C L + +C G + + + L K
Sbjct: 74 KAFKREVMAYRQTRHENVVLFMGACMS-PPHLAIITSLCKGRTLYSVVRDAKIVLDVNKT 132
Query: 76 MKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKT-------QREDSD 128
+IA KG+ YLH I+H+D+ N+ + + ++ DFGL +RED
Sbjct: 133 RQIAQEIVKGMGYLHAKGILHKDLKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKL 191
Query: 129 YSTETGVVGTLGYLAPEYV-------ECGKL--STKTDVYSFGVVLLQL 168
G L +LAPE + E KL S +DV++ G + +L
Sbjct: 192 RIQN----GWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYEL 236
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 76/167 (45%), Gaps = 7/167 (4%)
Query: 8 KDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR 67
K S++ ++ + E ++ +H N+V L S S+ LV++ V G L + + R
Sbjct: 40 KKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIV--AR 97
Query: 68 TPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPM---LGDFGLAKTQR 124
S + + + H N I+HRD+ P N+L+ + L DFGLA +
Sbjct: 98 EYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQ 157
Query: 125 EDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
D G GT GYL+PE + D+++ GV+L L+ G
Sbjct: 158 --GDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 9/169 (5%)
Query: 9 DASSQGDREFKSEVQVLSKARHENVVML---LGSCSDGNKRLLVYEYVCNGSLDQHLSKH 65
D + R + E+++L +H+N++ + L + VY + D H H
Sbjct: 92 DVVTNAKRTLR-ELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIH 150
Query: 66 TRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK---T 122
+ PL+ E +GL+Y+H +IHRD+ P+N+LV + E +GDFG+A+ T
Sbjct: 151 SSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCT 210
Query: 123 QREDSDYSTETGVVGTLGYLAPEY-VECGKLSTKTDVYSFGVVLLQLIT 170
+ Y T V T Y APE + + + D++S G + +++
Sbjct: 211 SPAEHQYFM-TEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLA 258
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 77/158 (48%), Gaps = 16/158 (10%)
Query: 21 EVQVLSKARHENVVMLLG------SCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
E+++L +HENV+ LL S + N LV ++ L+ + T +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV-THLMGADLNNIVKSQKLTD---DH 126
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
+ +GL+Y+H +IIHRD+ P+N+ V D E + DFGL + ++ TG
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEM-----TG 181
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLITG 171
V T Y APE + + D++S G ++ +L+TG
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 87/175 (49%), Gaps = 18/175 (10%)
Query: 5 KQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSK 64
K H++ S F ++SK H+++V+ G C G++ +LV E+V GSLD +L K
Sbjct: 50 KAHRNYSES----FFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKK 105
Query: 65 HTRT-PLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQ 123
+ + W ++++A A + +L EN +IH ++ NIL+ + + G+ K
Sbjct: 106 NKNCINILW--KLEVAKQLAWAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKL- 162
Query: 124 REDSDYSTETGVVGT------LGYLAPEYVECGK-LSTKTDVYSFGVVLLQLITG 171
SD V+ + ++ PE +E K L+ TD +SFG L ++ +G
Sbjct: 163 ---SDPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 83/179 (46%), Gaps = 13/179 (7%)
Query: 1 MIAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
++ V + + + K E + +H ++V LL + S +V+E++ L
Sbjct: 56 IVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCF 115
Query: 61 HLSKHTRTPLSWEKR-----MKIALGAAKGLQYLHENNIIHRDMGPNNILVT--HDFEPM 113
+ K + + M+ L A L+Y H+NNIIHRD+ P+ +L+ + P+
Sbjct: 116 EIVKRADAGFVYSEAVASHYMRQILEA---LRYCHDNNIIHRDVKPHCVLLASKENSAPV 172
Query: 114 -LGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
LG FG+A E G VGT ++APE V+ DV+ GV+L L++G
Sbjct: 173 KLGGFGVAIQLGESG--LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 88/181 (48%), Gaps = 25/181 (13%)
Query: 7 HKDASSQGDREFKS---------EVQVLSKARHENVVMLLG------SCSDGNKRLLVYE 51
H+ A + R F+S E+++L +HENV+ LL S + N LV
Sbjct: 68 HRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTH 127
Query: 52 YVCNGSLDQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFE 111
+ G+ ++ K + L+ + + +GL+Y+H +IIHRD+ P+N+ V D E
Sbjct: 128 LM--GADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE 183
Query: 112 PMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLIT 170
+ DFGLA+ ++ G V T Y APE + + D++S G ++ +L+T
Sbjct: 184 LKILDFGLARHTDDEM-----XGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 238
Query: 171 G 171
G
Sbjct: 239 G 239
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 11/158 (6%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLL--VYEYVCNGSLDQHLSKHT--RTPLSWEKR 75
SEV +L + +H N+V D L V EY G L ++K T R L E
Sbjct: 54 SEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV 113
Query: 76 MKIALGAAKGLQYLHE-----NNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYS 130
+++ L+ H + ++HRD+ P N+ + LGDFGLA+ D+ ++
Sbjct: 114 LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFA 173
Query: 131 TETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQL 168
VGT Y++PE + + K+D++S G +L +L
Sbjct: 174 --KTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 16/158 (10%)
Query: 21 EVQVLSKARHENVVMLLG------SCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
E+++L +HENV+ LL S + N LV + G+ ++ K + L+ +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK--LTDDH 126
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
+ +GL+Y+H +IIHRD+ P+N+ V D E + D+GLA+ ++ TG
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEM-----TG 181
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLITG 171
V T Y APE + + D++S G ++ +L+TG
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 83/179 (46%), Gaps = 13/179 (7%)
Query: 1 MIAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
++ V + + + K E + +H ++V LL + S +V+E++ L
Sbjct: 58 IVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCF 117
Query: 61 HLSKHTRTPLSWEKR-----MKIALGAAKGLQYLHENNIIHRDMGPNNILVT--HDFEPM 113
+ K + + M+ L A L+Y H+NNIIHRD+ P+ +L+ + P+
Sbjct: 118 EIVKRADAGFVYSEAVASHYMRQILEA---LRYCHDNNIIHRDVKPHCVLLASKENSAPV 174
Query: 114 -LGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
LG FG+A E G VGT ++APE V+ DV+ GV+L L++G
Sbjct: 175 KLGGFGVAIQLGESG--LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 76/167 (45%), Gaps = 7/167 (4%)
Query: 8 KDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR 67
K S++ ++ + E ++ +H N+V L S S+ LV++ V G L + + R
Sbjct: 40 KKLSARDHQKLEREARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIV--AR 97
Query: 68 TPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPM---LGDFGLAKTQR 124
S + + + H+ ++HRD+ P N+L+ + L DFGLA +
Sbjct: 98 EYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQ 157
Query: 125 EDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
D G GT GYL+PE + D+++ GV+L L+ G
Sbjct: 158 --GDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVG 202
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 115/262 (43%), Gaps = 52/262 (19%)
Query: 11 SSQGDREFKSEVQVLSKA--RHENVVMLLGSCSDGNKR------LLVYEYVCNGSLDQHL 62
SS+ ++ + E ++ + RHEN++ + S D R L+ Y GSL +L
Sbjct: 40 SSRDEKSWFRETELYNTVMLRHENILGFIAS--DMTSRHSSTQLWLITHYHEMGSLYDYL 97
Query: 63 SKHTRTPLSWEKRMKIALGAAKGLQYLH--------ENNIIHRDMGPNNILVTHDFEPML 114
T +S ++I L A GL +LH + I HRD+ NILV + + +
Sbjct: 98 QLTTLDTVS---CLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCI 154
Query: 115 GDFGLAKTQREDSDYSTETG---VVGTLGYLAPEY------VECGKLSTKTDVYSFGVVL 165
D GLA + ++ + G VGT Y+APE V+C + D+++FG+VL
Sbjct: 155 ADLGLAVMHSQSTN-QLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVL 213
Query: 166 LQLITGLKTNDKTLGEKGLVGWARPLLKER--NYPDLIDPRIIDCYDVHQ---------- 213
++ + +N G+V +P + N P D R + C D +
Sbjct: 214 WEVARRMVSN-------GIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSD 266
Query: 214 --LFWMVQIAKKCLSKDPQKRL 233
L + ++ K+C ++P RL
Sbjct: 267 PTLTSLAKLMKECWYQNPSARL 288
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 66/152 (43%), Gaps = 6/152 (3%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIAL 80
EV++ H N+V L LV EY G + +L H R E R K
Sbjct: 63 EVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXK-EKEARAKFR- 120
Query: 81 GAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLG 140
+QY H+ I+HRD+ N+L+ D + DFG + E + + G
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFSN---EFTFGNKLDAFCGAPP 177
Query: 141 YLAPEYVECGKLST-KTDVYSFGVVLLQLITG 171
Y APE + K + DV+S GV+L L++G
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 115/262 (43%), Gaps = 52/262 (19%)
Query: 11 SSQGDREFKSEVQVLSKA--RHENVVMLLGSCSDGNKR------LLVYEYVCNGSLDQHL 62
SS+ ++ + E ++ + RHEN++ + S D R L+ Y GSL +L
Sbjct: 40 SSRDEKSWFRETELYNTVMLRHENILGFIAS--DMTSRHSSTQLWLITHYHEMGSLYDYL 97
Query: 63 SKHTRTPLSWEKRMKIALGAAKGLQYLH--------ENNIIHRDMGPNNILVTHDFEPML 114
T +S ++I L A GL +LH + I HRD+ NILV + + +
Sbjct: 98 QLTTLDTVS---CLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCI 154
Query: 115 GDFGLAKTQREDSDYSTETG---VVGTLGYLAPEY------VECGKLSTKTDVYSFGVVL 165
D GLA + ++ + G VGT Y+APE V+C + D+++FG+VL
Sbjct: 155 ADLGLAVMHSQSTN-QLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVL 213
Query: 166 LQLITGLKTNDKTLGEKGLVGWARPLLKER--NYPDLIDPRIIDCYDVHQ---------- 213
++ + +N G+V +P + N P D R + C D +
Sbjct: 214 WEVARRMVSN-------GIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSD 266
Query: 214 --LFWMVQIAKKCLSKDPQKRL 233
L + ++ K+C ++P RL
Sbjct: 267 PTLTSLAKLMKECWYQNPSARL 288
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 67/156 (42%), Gaps = 14/156 (8%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSW----EKRM 76
EV+++ H N+V L LV EY G + +L H W E R
Sbjct: 56 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH-----GWMKEKEARA 110
Query: 77 KIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVV 136
K +QY H+ I+HRD+ N+L+ D + DFG + + T
Sbjct: 111 KFR-QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FC 166
Query: 137 GTLGYLAPEYVECGKLST-KTDVYSFGVVLLQLITG 171
G+ Y APE + K + DV+S GV+L L++G
Sbjct: 167 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 202
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 78/166 (46%), Gaps = 19/166 (11%)
Query: 16 REFKSEVQVLSK-ARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
R+ E+++L + +H N++ L DG +V E + G L L K R E+
Sbjct: 60 RDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGEL---LDKILRQKFFSER 116
Query: 75 RMKIALGA-AKGLQYLHENNIIHRDMGPNNIL-VTHDFEP---MLGDFGLAKTQREDSDY 129
L K ++YLH ++HRD+ P+NIL V P + DFG AK R
Sbjct: 117 EASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR----- 171
Query: 130 STETGVVG----TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
E G++ T ++APE +E D++S GV+L ++TG
Sbjct: 172 -AENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYE--YVCNGSLDQHLSKHTRTPLSWEKRMKI 78
E+ ++ H+N++ LL + K L ++ Y+ +D +LS+ + L E+ +
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTP-QKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYL 131
Query: 79 ALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
G+++LH IIHRD+ P+NI+V D + DFGLA+T T V T
Sbjct: 132 LYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTA---GTSFMMTPYVVT 188
Query: 139 LGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
Y APE + D++S G ++ ++I G
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 85/194 (43%), Gaps = 32/194 (16%)
Query: 70 LSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDY 129
L+ E + + AKG+++L IHRD+ NIL++ + DFGLA+ +D DY
Sbjct: 195 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 254
Query: 130 STETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT-------GLKTNDKTLGEK 182
+ L ++APE + + ++DV+SFGV+L ++ + G+K +++
Sbjct: 255 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR- 313
Query: 183 GLVGWARPLLKE---RNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQKRLPMDTVV 239
LKE PD P M Q C +P +R +V
Sbjct: 314 ---------LKEGTRMRAPDYTTPE------------MYQTMLDCWHGEPSQRPTFSELV 352
Query: 240 DALKSIMEGTATSN 253
+ L ++++ A +
Sbjct: 353 EHLGNLLQANAQQD 366
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 2 IAVKQHKDASSQGD-REFKSEVQVLSK-ARHENVVMLLGSCSD-GNKRLLVYEYVCNGSL 58
+AVK K+ ++ + R SE+++L H NVV LLG+C+ G +++ E+ G+L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 59 DQHL 62
+L
Sbjct: 120 STYL 123
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 80/158 (50%), Gaps = 16/158 (10%)
Query: 21 EVQVLSKARHENVVMLLG------SCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
E+++L +HENV+ LL S + N LV + G+ ++ K + L+ +
Sbjct: 94 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK--LTDDH 149
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
+ +GL+Y+H +IIHRD+ P+N+ V D E + DFGLA+ ++ G
Sbjct: 150 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-----XG 204
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLITG 171
V T Y APE + + D++S G ++ +L+TG
Sbjct: 205 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 242
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 85/194 (43%), Gaps = 32/194 (16%)
Query: 70 LSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDY 129
L+ E + + AKG+++L IHRD+ NIL++ + DFGLA+ +D DY
Sbjct: 197 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 256
Query: 130 STETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT-------GLKTNDKTLGEK 182
+ L ++APE + + ++DV+SFGV+L ++ + G+K +++
Sbjct: 257 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR- 315
Query: 183 GLVGWARPLLKE---RNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQKRLPMDTVV 239
LKE PD P M Q C +P +R +V
Sbjct: 316 ---------LKEGTRMRAPDYTTPE------------MYQTMLDCWHGEPSQRPTFSELV 354
Query: 240 DALKSIMEGTATSN 253
+ L ++++ A +
Sbjct: 355 EHLGNLLQANAQQD 368
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 2 IAVKQHKDASSQGD-REFKSEVQVLSK-ARHENVVMLLGSCSD-GNKRLLVYEYVCNGSL 58
+AVK K+ ++ + R SE+++L H NVV LLG+C+ G +++ E+ G+L
Sbjct: 62 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 121
Query: 59 DQHL 62
+L
Sbjct: 122 STYL 125
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 88/181 (48%), Gaps = 25/181 (13%)
Query: 7 HKDASSQGDREFKS---------EVQVLSKARHENVVMLLG------SCSDGNKRLLVYE 51
H+ A + R F+S E+++L +HENV+ LL S + N LV
Sbjct: 48 HRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTH 107
Query: 52 YVCNGSLDQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFE 111
+ G+ ++ K + L+ + + +GL+Y+H +IIHRD+ P+N+ V D E
Sbjct: 108 LM--GADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE 163
Query: 112 PMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLIT 170
+ DF LA+ ++ TG V T Y APE + + D++S G ++ +L+T
Sbjct: 164 LKILDFYLARHTDDEM-----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 171 G 171
G
Sbjct: 219 G 219
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 32/191 (16%)
Query: 70 LSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDY 129
L+ E + + AKG+++L IHRD+ NIL++ + DFGLA+ +D DY
Sbjct: 190 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 249
Query: 130 STETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT-------GLKTNDKTLGEK 182
+ L ++APE + + ++DV+SFGV+L ++ + G+K +++
Sbjct: 250 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR- 308
Query: 183 GLVGWARPLLKE---RNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQKRLPMDTVV 239
LKE PD P M Q C +P +R +V
Sbjct: 309 ---------LKEGTRMRAPDYTTPE------------MYQTMLDCWHGEPSQRPTFSELV 347
Query: 240 DALKSIMEGTA 250
+ L ++++ A
Sbjct: 348 EHLGNLLQANA 358
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 2 IAVKQHKDASSQGD-REFKSEVQVLSK-ARHENVVMLLGSCSD-GNKRLLVYEYVCNGSL 58
+AVK K+ ++ + R SE+++L H NVV LLG+C+ G +++ E+ G+L
Sbjct: 55 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 114
Query: 59 DQHL 62
+L
Sbjct: 115 STYL 118
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 21 EVQVLSKARHENVVMLLG-----SCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKR 75
E+++L +HEN++ + S + N+ ++ E + D H T+ LS +
Sbjct: 59 EIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELM---QTDLHRVISTQM-LSDDHI 114
Query: 76 MKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQRED-SDYSTETG 134
+ ++ LH +N+IHRD+ P+N+L+ + + + DFGLA+ E +D S TG
Sbjct: 115 QYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 135 -------VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLI 169
V T Y APE + K S DV+S G +L +L
Sbjct: 175 QQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 32/191 (16%)
Query: 70 LSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDY 129
L+ E + + AKG+++L IHRD+ NIL++ + DFGLA+ +D DY
Sbjct: 188 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 247
Query: 130 STETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT-------GLKTNDKTLGEK 182
+ L ++APE + + ++DV+SFGV+L ++ + G+K +++
Sbjct: 248 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR- 306
Query: 183 GLVGWARPLLKE---RNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQKRLPMDTVV 239
LKE PD P M Q C +P +R +V
Sbjct: 307 ---------LKEGTRMRAPDYTTPE------------MYQTMLDCWHGEPSQRPTFSELV 345
Query: 240 DALKSIMEGTA 250
+ L ++++ A
Sbjct: 346 EHLGNLLQANA 356
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 2 IAVKQHKDASSQGD-REFKSEVQVLSK-ARHENVVMLLGSCSD-GNKRLLVYEYVCNGSL 58
+AVK K+ ++ + R SE+++L H NVV LLG+C+ G +++ E+ G+L
Sbjct: 53 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 112
Query: 59 DQHL 62
+L
Sbjct: 113 STYL 116
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 115/262 (43%), Gaps = 52/262 (19%)
Query: 11 SSQGDREFKSEVQVLSKA--RHENVVMLLGSCSDGNKR------LLVYEYVCNGSLDQHL 62
SS+ ++ + E ++ + RHEN++ + S D R L+ Y GSL +L
Sbjct: 69 SSRDEKSWFRETELYNTVMLRHENILGFIAS--DMTSRHSSTQLWLITHYHEMGSLYDYL 126
Query: 63 SKHTRTPLSWEKRMKIALGAAKGLQYLH--------ENNIIHRDMGPNNILVTHDFEPML 114
T +S ++I L A GL +LH + I HRD+ NILV + + +
Sbjct: 127 QLTTLDTVS---CLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCI 183
Query: 115 GDFGLAKTQREDSDYSTETG---VVGTLGYLAPEY------VECGKLSTKTDVYSFGVVL 165
D GLA + ++ + G VGT Y+APE V+C + D+++FG+VL
Sbjct: 184 ADLGLAVMHSQSTN-QLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVL 242
Query: 166 LQLITGLKTNDKTLGEKGLVGWARPLLKER--NYPDLIDPRIIDCYDVHQ---------- 213
++ + +N G+V +P + N P D R + C D +
Sbjct: 243 WEVARRMVSN-------GIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSD 295
Query: 214 --LFWMVQIAKKCLSKDPQKRL 233
L + ++ K+C ++P RL
Sbjct: 296 PTLTSLAKLMKECWYQNPSARL 317
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYE--YVCNGSLDQHLSKHTRTPLSWEKRMKI 78
E+ ++ H+N++ LL + K L ++ Y+ +D +LS+ + L E+ +
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTP-QKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYL 131
Query: 79 ALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
G+++LH IIHRD+ P+NI+V D + DFGLA+T T V T
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTA---GTSFMMTPYVVT 188
Query: 139 LGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
Y APE + D++S G ++ ++I G
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 93/177 (52%), Gaps = 14/177 (7%)
Query: 1 MIAVKQ----HKDASSQG-DREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCN 55
++A+K+ H+ + G +R E+++L + H N++ LL + + LV++++
Sbjct: 37 IVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM-E 95
Query: 56 GSLDQHLSKHTR--TPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPM 113
L+ + ++ TP + M + L +GL+YLH++ I+HRD+ PNN+L+ +
Sbjct: 96 TDLEVIIKDNSLVLTPSHIKAYMLMTL---QGLEYLHQHWILHRDLKPNNLLLDENGVLK 152
Query: 114 LGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKL-STKTDVYSFGVVLLQLI 169
L DFGLAK+ S V T Y APE + ++ D+++ G +L +L+
Sbjct: 153 LADFGLAKS--FGSPNRAYXHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 71/160 (44%), Gaps = 10/160 (6%)
Query: 16 REFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKR 75
R E+Q++ H +V L S D +V + + G L HL ++ E+
Sbjct: 60 RNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFK---EET 116
Query: 76 MKIALGA-AKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
+K+ + L YL IIHRDM P+NIL+ + DF +A ++ +T
Sbjct: 117 VKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITT--- 173
Query: 135 VVGTLGYLAPEYVECGK---LSTKTDVYSFGVVLLQLITG 171
+ GT Y+APE K S D +S GV +L+ G
Sbjct: 174 MAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRG 213
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 102/232 (43%), Gaps = 30/232 (12%)
Query: 19 KSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKI 78
K+E+ ++++ H ++ L + D + +L+ E++ G L ++ +S + +
Sbjct: 96 KNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYK-MSEAEVINY 154
Query: 79 ALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLG--DFGLAKTQREDSDYSTETGVV 136
A +GL+++HE++I+H D+ P NI+ + DFGLA D T
Sbjct: 155 MRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT--- 211
Query: 137 GTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTNDKTLGEKGLVGWARPLLKERN 196
T + APE V+ + TD+++ GV+ L++GL P E +
Sbjct: 212 ATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLS----------------PFAGEDD 255
Query: 197 YPDLIDPRIIDCYDVHQLFWMVQ-----IAKKCLSKDPQKRLPMDTVVDALK 243
L + + D F V K L K+P+KRL TV DAL+
Sbjct: 256 LETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRL---TVHDALE 304
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYE--YVCNGSLDQHLSKHTRTPLSWEKRMKI 78
E+ ++ H+N++ LL + K L ++ Y+ +D +LS+ + L E+ +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTP-QKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYL 131
Query: 79 ALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
G+++LH IIHRD+ P+NI+V D + DFGLA+T T V T
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVT 188
Query: 139 LGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
Y APE + D++S G ++ ++I G
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 114/259 (44%), Gaps = 37/259 (14%)
Query: 1 MIAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSD--GNKRLLVYEYVCNGSL 58
++ V + +D S++ R+F E L H NV+ +LG+C L+ ++ GSL
Sbjct: 37 VVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSL 96
Query: 59 DQHLSKHTRTPLSWEKRMKIALGAAKGLQYLH--ENNIIHRDMGPNNILVTHDFEPMLGD 116
L + T + + +K AL A+G+ +LH E I + ++++ D
Sbjct: 97 YNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMT----- 151
Query: 117 FGLAKTQREDSDYSTET-GVVGTLGYLAPEYVECGKLSTK---TDVYSFGVVLLQLITG- 171
A+ D +S ++ G + ++APE ++ T D++SF V+L +L+T
Sbjct: 152 ---ARISMADVKFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTRE 208
Query: 172 ---LKTNDKTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKD 228
++ +G K + RP + P I P + ++ K C+++D
Sbjct: 209 VPFADLSNMEIGMKVALEGLRPTI-----PPGISPHV------------SKLMKICMNED 251
Query: 229 PQKRLPMDTVVDALKSIME 247
P KR D +V L+ + +
Sbjct: 252 PAKRPKFDMIVPILEKMQD 270
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYE--YVCNGSLDQHLSKHTRTPLSWEKRMKI 78
E+ +L H+N++ LL + K L ++ Y+ +D +L + L E+ +
Sbjct: 73 ELVLLKCVNHKNIISLLNVFT-PQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYL 131
Query: 79 ALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
G+++LH IIHRD+ P+NI+V D + DFGLA+T + T V T
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTN---FMMTPYVVT 188
Query: 139 LGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
Y APE + + D++S G ++ +L+ G
Sbjct: 189 RYYRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYE--YVCNGSLDQHLSKHTRTPLSWEKRMKI 78
E+ ++ H+N++ LL + K L ++ Y+ +D +LS+ + L E+ +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTP-QKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYL 131
Query: 79 ALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
G+++LH IIHRD+ P+NI+V D + DFGLA+T T V T
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTA---GTSFMMTPYVVT 188
Query: 139 LGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
Y APE + D++S G ++ ++I G
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 80/158 (50%), Gaps = 16/158 (10%)
Query: 21 EVQVLSKARHENVVMLLG------SCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
E+++L +HENV+ LL S + N LV + G+ ++ K + L+ +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK--LTDDH 126
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
+ +GL+Y+H +IIHRD+ P+N+ V D E + FGLA+ ++ TG
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEM-----TG 181
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLITG 171
V T Y APE + + D++S G ++ +L+TG
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 21 EVQVLSKARHENVVMLLG-----SCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKR 75
E+++L +HEN++ + S + N+ ++ E + D H T+ LS +
Sbjct: 59 EIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELM---QTDLHRVISTQM-LSDDHI 114
Query: 76 MKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQRED-SDYSTETG 134
+ ++ LH +N+IHRD+ P+N+L+ + + + DFGLA+ E +D S TG
Sbjct: 115 QYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 135 -------VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLI 169
V T Y APE + K S DV+S G +L +L
Sbjct: 175 QQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 21 EVQVLSKARHENVVMLLG-----SCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKR 75
E+++L +HEN++ + S + N+ ++ E + D H T+ LS +
Sbjct: 59 EIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELM---QTDLHRVISTQM-LSDDHI 114
Query: 76 MKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQRED-SDYSTETG 134
+ ++ LH +N+IHRD+ P+N+L+ + + + DFGLA+ E +D S TG
Sbjct: 115 QYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 135 -------VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLI 169
V T Y APE + K S DV+S G +L +L
Sbjct: 175 QQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 84/183 (45%), Gaps = 18/183 (9%)
Query: 21 EVQVLSKAR-HENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIA 79
EV++L + + H NV+ L+ + ++ LV+E + GS+ H+ H R + + +
Sbjct: 60 EVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHI--HKRRHFNELEASVVV 117
Query: 80 LGAAKGLQYLHENNIIHRDMGPNNILVTH--DFEPM-LGDFGLAKTQREDSDYSTET--- 133
A L +LH I HRD+ P NIL H P+ + DFGL + + D S +
Sbjct: 118 QDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPE 177
Query: 134 --GVVGTLGYLAPEYV-----ECGKLSTKTDVYSFGVVLLQLITGLKTNDKTLGEKGLVG 186
G+ Y+APE V E + D++S GV+L L++G G G
Sbjct: 178 LLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSD--CG 235
Query: 187 WAR 189
W R
Sbjct: 236 WDR 238
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 74/153 (48%), Gaps = 6/153 (3%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYE--YVCNGSLDQHLSKHTRTPLSWEKRMKI 78
E+ +L H+N++ LL + K L ++ Y+ +D +L + L E+ +
Sbjct: 71 ELVLLKCVNHKNIISLLNVFT-PQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYL 129
Query: 79 ALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
G+++LH IIHRD+ P+NI+V D + DFGLA+T S T V T
Sbjct: 130 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---STNFMMTPYVVT 186
Query: 139 LGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
Y APE + D++S G ++ +L+ G
Sbjct: 187 RYYRAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 88/182 (48%), Gaps = 29/182 (15%)
Query: 11 SSQGDREFKSEVQVLSKA--RHENVVMLLGSCSDGN----KRLLVYEYVCNGSLDQHLSK 64
SS+ +R + E ++ RHEN++ + + + N + LV +Y +GSL +L++
Sbjct: 36 SSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR 95
Query: 65 HTRTPLSWEKRMKIALGAAKGLQYLH--------ENNIIHRDMGPNNILVTHDFEPMLGD 116
+T T E +K+AL A GL +LH + I HRD+ NILV + + D
Sbjct: 96 YTVTV---EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 152
Query: 117 FGLAKTQREDSDYST----ETGVVGTLGYLAPEYVECG------KLSTKTDVYSFGVVLL 166
GLA R DS T VGT Y+APE ++ + + D+Y+ G+V
Sbjct: 153 LGLA--VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFW 210
Query: 167 QL 168
++
Sbjct: 211 EI 212
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 10 ASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTP 69
A S + E+ L RH +++ L ++ ++V EY N D + R
Sbjct: 43 AKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQ---RDK 99
Query: 70 LSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDY 129
+S ++ + ++Y H + I+HRD+ P N+L+ + DFGL+ + +
Sbjct: 100 MSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFL 159
Query: 130 STETGVVGTLGYLAPEYVECGKLST--KTDVYSFGVVL 165
T G+ Y APE + GKL + DV+S GV+L
Sbjct: 160 KTSC---GSPNYAAPEVIS-GKLYAGPEVDVWSCGVIL 193
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 87/182 (47%), Gaps = 29/182 (15%)
Query: 11 SSQGDREFKSEVQVLSKA--RHENVVMLLGSCSDGN----KRLLVYEYVCNGSLDQHLSK 64
SS+ +R + E ++ RHEN++ + + + N + LV +Y +GSL +L++
Sbjct: 35 SSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR 94
Query: 65 HTRTPLSWEKRMKIALGAAKGLQYLHEN--------NIIHRDMGPNNILVTHDFEPMLGD 116
+T T E +K+AL A GL +LH I HRD+ NILV + + D
Sbjct: 95 YTVTV---EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 151
Query: 117 FGLAKTQREDSDYST----ETGVVGTLGYLAPEYVECG------KLSTKTDVYSFGVVLL 166
GLA R DS T VGT Y+APE ++ + + D+Y+ G+V
Sbjct: 152 LGLA--VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFW 209
Query: 167 QL 168
++
Sbjct: 210 EI 211
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 88/182 (48%), Gaps = 29/182 (15%)
Query: 11 SSQGDREFKSEVQVLSKA--RHENVVMLLGSCSDGN----KRLLVYEYVCNGSLDQHLSK 64
SS+ +R + E ++ RHEN++ + + + N + LV +Y +GSL +L++
Sbjct: 41 SSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR 100
Query: 65 HTRTPLSWEKRMKIALGAAKGLQYLH--------ENNIIHRDMGPNNILVTHDFEPMLGD 116
+T T E +K+AL A GL +LH + I HRD+ NILV + + D
Sbjct: 101 YTVTV---EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 157
Query: 117 FGLAKTQREDSDYST----ETGVVGTLGYLAPEYVECG------KLSTKTDVYSFGVVLL 166
GLA R DS T VGT Y+APE ++ + + D+Y+ G+V
Sbjct: 158 LGLA--VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFW 215
Query: 167 QL 168
++
Sbjct: 216 EI 217
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 88/182 (48%), Gaps = 29/182 (15%)
Query: 11 SSQGDREFKSEVQVLSKA--RHENVVMLLGSCSDGN----KRLLVYEYVCNGSLDQHLSK 64
SS+ +R + E ++ RHEN++ + + + N + LV +Y +GSL +L++
Sbjct: 74 SSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR 133
Query: 65 HTRTPLSWEKRMKIALGAAKGLQYLH--------ENNIIHRDMGPNNILVTHDFEPMLGD 116
+T T E +K+AL A GL +LH + I HRD+ NILV + + D
Sbjct: 134 YTVTV---EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 190
Query: 117 FGLAKTQREDSDYST----ETGVVGTLGYLAPEYVECG------KLSTKTDVYSFGVVLL 166
GLA R DS T VGT Y+APE ++ + + D+Y+ G+V
Sbjct: 191 LGLA--VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFW 248
Query: 167 QL 168
++
Sbjct: 249 EI 250
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 7/167 (4%)
Query: 8 KDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR 67
K S++ ++ + E ++ +H N+V L S S+ L+++ V G L + + R
Sbjct: 58 KKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIV--AR 115
Query: 68 TPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPM---LGDFGLAKTQR 124
S + + + H+ ++HRD+ P N+L+ + L DFGLA
Sbjct: 116 EYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAI--E 173
Query: 125 EDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
+ + G GT GYL+PE + D+++ GV+L L+ G
Sbjct: 174 VEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 220
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 88/182 (48%), Gaps = 29/182 (15%)
Query: 11 SSQGDREFKSEVQVLSKA--RHENVVMLLGSCSDGN----KRLLVYEYVCNGSLDQHLSK 64
SS+ +R + E ++ RHEN++ + + + N + LV +Y +GSL +L++
Sbjct: 61 SSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR 120
Query: 65 HTRTPLSWEKRMKIALGAAKGLQYLH--------ENNIIHRDMGPNNILVTHDFEPMLGD 116
+T T E +K+AL A GL +LH + I HRD+ NILV + + D
Sbjct: 121 YTVTV---EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 177
Query: 117 FGLAKTQREDSDYST----ETGVVGTLGYLAPEYVECG------KLSTKTDVYSFGVVLL 166
GLA R DS T VGT Y+APE ++ + + D+Y+ G+V
Sbjct: 178 LGLA--VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFW 235
Query: 167 QL 168
++
Sbjct: 236 EI 237
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 88/182 (48%), Gaps = 29/182 (15%)
Query: 11 SSQGDREFKSEVQVLSKA--RHENVVMLLGSCSDGN----KRLLVYEYVCNGSLDQHLSK 64
SS+ +R + E ++ RHEN++ + + + N + LV +Y +GSL +L++
Sbjct: 38 SSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR 97
Query: 65 HTRTPLSWEKRMKIALGAAKGLQYLH--------ENNIIHRDMGPNNILVTHDFEPMLGD 116
+T T E +K+AL A GL +LH + I HRD+ NILV + + D
Sbjct: 98 YTVTV---EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 154
Query: 117 FGLAKTQREDSDYST----ETGVVGTLGYLAPEYVECG------KLSTKTDVYSFGVVLL 166
GLA R DS T VGT Y+APE ++ + + D+Y+ G+V
Sbjct: 155 LGLA--VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFW 212
Query: 167 QL 168
++
Sbjct: 213 EI 214
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 10 ASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTP 69
A S + E+ L RH +++ L ++ ++V EY N D + R
Sbjct: 47 AKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQ---RDK 103
Query: 70 LSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDY 129
+S ++ + ++Y H + I+HRD+ P N+L+ + DFGL+ + +
Sbjct: 104 MSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFL 163
Query: 130 STETGVVGTLGYLAPEYVECGKLST--KTDVYSFGVVL 165
T G+ Y APE + GKL + DV+S GV+L
Sbjct: 164 KTSC---GSPNYAAPEVIS-GKLYAGPEVDVWSCGVIL 197
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 76/166 (45%), Gaps = 19/166 (11%)
Query: 16 REFKSEVQVLSK-ARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
R+ E+++L + +H N++ L DG +V E G L L K R E+
Sbjct: 60 RDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGEL---LDKILRQKFFSER 116
Query: 75 RMKIALGA-AKGLQYLHENNIIHRDMGPNNIL-VTHDFEP---MLGDFGLAKTQREDSDY 129
L K ++YLH ++HRD+ P+NIL V P + DFG AK R
Sbjct: 117 EASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR----- 171
Query: 130 STETGVVG----TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
E G++ T ++APE +E D++S GV+L +TG
Sbjct: 172 -AENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 80/158 (50%), Gaps = 16/158 (10%)
Query: 21 EVQVLSKARHENVVMLLG------SCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
E+++L +HENV+ LL S + N LV + G+ ++ K + L+ +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK--LTDDH 126
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
+ +GL+Y+H +IIHRD+ P+N+ V D E + D GLA+ ++ TG
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEM-----TG 181
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLITG 171
V T Y APE + + D++S G ++ +L+TG
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 10 ASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTP 69
A S + E+ L RH +++ L ++ ++V EY N D + R
Sbjct: 53 AKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQ---RDK 109
Query: 70 LSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDY 129
+S ++ + ++Y H + I+HRD+ P N+L+ + DFGL+ + +
Sbjct: 110 MSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFL 169
Query: 130 STETGVVGTLGYLAPEYVECGKLST--KTDVYSFGVVL 165
T G+ Y APE + GKL + DV+S GV+L
Sbjct: 170 KTSC---GSPNYAAPEVIS-GKLYAGPEVDVWSCGVIL 203
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 10 ASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTP 69
A S + E+ L RH +++ L ++ ++V EY N D + R
Sbjct: 52 AKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQ---RDK 108
Query: 70 LSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDY 129
+S ++ + ++Y H + I+HRD+ P N+L+ + DFGL+ + +
Sbjct: 109 MSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFL 168
Query: 130 STETGVVGTLGYLAPEYVECGKLST--KTDVYSFGVVL 165
T G+ Y APE + GKL + DV+S GV+L
Sbjct: 169 KTSC---GSPNYAAPEVIS-GKLYAGPEVDVWSCGVIL 202
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 75/155 (48%), Gaps = 11/155 (7%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSL-DQHLSKHTRTPLSWEKRMKIA 79
EV VL + H N++ L D LV E G L D+ + + + + MK
Sbjct: 71 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQV 130
Query: 80 LGAAKGLQYLHENNIIHRDMGPNNILV---THDFEPMLGDFGLAKTQREDSDYSTETGVV 136
L G YLH++NI+HRD+ P N+L+ + D + DFGL+ E E +
Sbjct: 131 LS---GTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLS-AHFEVGGKMKER--L 184
Query: 137 GTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
GT Y+APE + K K DV+S GV+L L+ G
Sbjct: 185 GTAYYIAPEVLR-KKYDEKCDVWSCGVILYILLCG 218
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 80/158 (50%), Gaps = 16/158 (10%)
Query: 21 EVQVLSKARHENVVMLLG------SCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
E+++L +HENV+ LL S + N LV + G+ ++ K + L+ +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK--LTDDH 126
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
+ +GL+Y+H +IIHRD+ P+N+ V D E + D GLA+ ++ TG
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEM-----TG 181
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLITG 171
V T Y APE + + D++S G ++ +L+TG
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 78/183 (42%), Gaps = 12/183 (6%)
Query: 18 FKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMK 77
F E +++ A VV L + D +V EY+ G L +S + P W K
Sbjct: 122 FWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYD-VPEKWAKFYT 180
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
+ A L +H +IHRD+ P+N+L+ L DFG E +T VG
Sbjct: 181 AEVVLA--LDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTA-VG 237
Query: 138 TLGYLAPEYVEC----GKLSTKTDVYSFGVVLLQLITGLKTNDKTLGEKGLVGWARPLLK 193
T Y++PE ++ G + D +S GV L +++ G D LVG ++
Sbjct: 238 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG----DTPFYADSLVGTYSKIMD 293
Query: 194 ERN 196
+N
Sbjct: 294 HKN 296
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYE--YVCNGSLDQHLSKHTRTPLSWEKRMKI 78
E+ ++ H+N++ LL + K L ++ Y+ +D +L + + L E+ +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTP-QKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL 131
Query: 79 ALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
G+++LH IIHRD+ P+NI+V D + DFGLA+T + E V T
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPE---VVT 188
Query: 139 LGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
Y APE + D++S G ++ ++I G
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR--TPLSWEKRMK 77
+E ++L +V L S D + +V EYV G + HL + R P + +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
I L +YLH ++I+RD+ P N+L+ + DFG AK + + G
Sbjct: 150 IVLT----FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCG 200
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T YLAPE + + D ++ GV++ Q+ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 78/173 (45%), Gaps = 6/173 (3%)
Query: 2 IAVKQHK-DASSQGDR--EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSL 58
+AVK K D SQ + +F EV + H N++ L G ++ V E GSL
Sbjct: 39 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSL 97
Query: 59 DQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFG 118
L KH L + A+ A+G+ YL IHRD+ N+L+ +GDFG
Sbjct: 98 LDRLRKHQGHFLL-GTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFG 156
Query: 119 LAKTQREDSD-YSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
L + ++ D Y + + APE ++ S +D + FGV L ++ T
Sbjct: 157 LMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 78/173 (45%), Gaps = 6/173 (3%)
Query: 2 IAVKQHK-DASSQGDR--EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSL 58
+AVK K D SQ + +F EV + H N++ L G ++ V E GSL
Sbjct: 39 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSL 97
Query: 59 DQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFG 118
L KH L + A+ A+G+ YL IHRD+ N+L+ +GDFG
Sbjct: 98 LDRLRKHQGHFLL-GTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFG 156
Query: 119 LAKTQREDSD-YSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
L + ++ D Y + + APE ++ S +D + FGV L ++ T
Sbjct: 157 LMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 78/174 (44%), Gaps = 11/174 (6%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSL-DQ 60
I + + S+ + + EV VL H N++ L D LV E G L D+
Sbjct: 67 IKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDE 126
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILV---THDFEPMLGDF 117
+ + + +K L G+ YLH++NI+HRD+ P N+L+ D + DF
Sbjct: 127 IIHRMKFNEVDAAVIIKQVLS---GVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDF 183
Query: 118 GLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
GL+ +GT Y+APE + K K DV+S GV+L L+ G
Sbjct: 184 GLSAVFENQKKMKER---LGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAG 233
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 48/104 (46%), Gaps = 13/104 (12%)
Query: 84 KGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDY------------ST 131
+ L Y+H IIHRD+ P NI + +GDFGLAK D
Sbjct: 127 EALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDN 186
Query: 132 ETGVVGTLGYLAPEYVE-CGKLSTKTDVYSFGVVLLQLITGLKT 174
T +GT Y+A E ++ G + K D+YS G++ ++I T
Sbjct: 187 LTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFST 230
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 80/158 (50%), Gaps = 16/158 (10%)
Query: 21 EVQVLSKARHENVVMLLG------SCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
E+++L +HENV+ LL S + N LV + G+ ++ K + L+ +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK--LTDDH 126
Query: 75 RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETG 134
+ +GL+Y+H +IIHRD+ P+N+ V D E + D GLA+ ++ TG
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEM-----TG 181
Query: 135 VVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLITG 171
V T Y APE + + D++S G ++ +L+TG
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 76/159 (47%), Gaps = 12/159 (7%)
Query: 19 KSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKI 78
++E+++L K H ++ + + D +V E + G L + + R + K
Sbjct: 188 ETEIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 246
Query: 79 ALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPML---GDFGLAKTQREDSDYSTETGV 135
+ A +QYLHEN IIHRD+ P N+L++ E L DFG +K E S T +
Sbjct: 247 QMLLA--VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT---L 301
Query: 136 VGTLGYLAPEY---VECGKLSTKTDVYSFGVVLLQLITG 171
GT YLAPE V + D +S GV+L ++G
Sbjct: 302 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 340
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 76/159 (47%), Gaps = 12/159 (7%)
Query: 19 KSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKI 78
++E+++L K H ++ + + D +V E + G L + + R + K
Sbjct: 62 ETEIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 120
Query: 79 ALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPML---GDFGLAKTQREDSDYSTETGV 135
+ A +QYLHEN IIHRD+ P N+L++ E L DFG +K E S T +
Sbjct: 121 QMLLA--VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT---L 175
Query: 136 VGTLGYLAPEY---VECGKLSTKTDVYSFGVVLLQLITG 171
GT YLAPE V + D +S GV+L ++G
Sbjct: 176 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 214
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 76/159 (47%), Gaps = 12/159 (7%)
Query: 19 KSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKI 78
++E+++L K H ++ + + D +V E + G L + + R + K
Sbjct: 63 ETEIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 79 ALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPML---GDFGLAKTQREDSDYSTETGV 135
+ A +QYLHEN IIHRD+ P N+L++ E L DFG +K E S T +
Sbjct: 122 QMLLA--VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT---L 176
Query: 136 VGTLGYLAPEY---VECGKLSTKTDVYSFGVVLLQLITG 171
GT YLAPE V + D +S GV+L ++G
Sbjct: 177 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 78/173 (45%), Gaps = 6/173 (3%)
Query: 2 IAVKQHK-DASSQGDR--EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSL 58
+AVK K D SQ + +F EV + H N++ L G ++ V E GSL
Sbjct: 43 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSL 101
Query: 59 DQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFG 118
L KH L + A+ A+G+ YL IHRD+ N+L+ +GDFG
Sbjct: 102 LDRLRKHQGHFLL-GTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFG 160
Query: 119 LAKTQREDSD-YSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
L + ++ D Y + + APE ++ S +D + FGV L ++ T
Sbjct: 161 LMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 78/173 (45%), Gaps = 6/173 (3%)
Query: 2 IAVKQHK-DASSQGDR--EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSL 58
+AVK K D SQ + +F EV + H N++ L G ++ V E GSL
Sbjct: 49 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSL 107
Query: 59 DQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFG 118
L KH L + A+ A+G+ YL IHRD+ N+L+ +GDFG
Sbjct: 108 LDRLRKHQGHFLL-GTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFG 166
Query: 119 LAKTQREDSD-YSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
L + ++ D Y + + APE ++ S +D + FGV L ++ T
Sbjct: 167 LMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 48/104 (46%), Gaps = 13/104 (12%)
Query: 84 KGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDY------------ST 131
+ L Y+H IIHRD+ P NI + +GDFGLAK D
Sbjct: 127 EALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDN 186
Query: 132 ETGVVGTLGYLAPEYVE-CGKLSTKTDVYSFGVVLLQLITGLKT 174
T +GT Y+A E ++ G + K D+YS G++ ++I T
Sbjct: 187 LTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFST 230
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 78/173 (45%), Gaps = 6/173 (3%)
Query: 2 IAVKQHK-DASSQGDR--EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSL 58
+AVK K D SQ + +F EV + H N++ L G ++ V E GSL
Sbjct: 43 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSL 101
Query: 59 DQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFG 118
L KH L + A+ A+G+ YL IHRD+ N+L+ +GDFG
Sbjct: 102 LDRLRKHQGHFLL-GTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFG 160
Query: 119 LAKTQREDSD-YSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
L + ++ D Y + + APE ++ S +D + FGV L ++ T
Sbjct: 161 LMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 76/159 (47%), Gaps = 12/159 (7%)
Query: 19 KSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKI 78
++E+++L K H ++ + + D +V E + G L + + R + K
Sbjct: 63 ETEIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 79 ALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPML---GDFGLAKTQREDSDYSTETGV 135
+ A +QYLHEN IIHRD+ P N+L++ E L DFG +K E S T +
Sbjct: 122 QMLLA--VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT---L 176
Query: 136 VGTLGYLAPEY---VECGKLSTKTDVYSFGVVLLQLITG 171
GT YLAPE V + D +S GV+L ++G
Sbjct: 177 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 76/159 (47%), Gaps = 12/159 (7%)
Query: 19 KSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKI 78
++E+++L K H ++ + + D +V E + G L + + R + K
Sbjct: 69 ETEIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 127
Query: 79 ALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPML---GDFGLAKTQREDSDYSTETGV 135
+ A +QYLHEN IIHRD+ P N+L++ E L DFG +K E S T +
Sbjct: 128 QMLLA--VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT---L 182
Query: 136 VGTLGYLAPEY---VECGKLSTKTDVYSFGVVLLQLITG 171
GT YLAPE V + D +S GV+L ++G
Sbjct: 183 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 221
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 76/159 (47%), Gaps = 12/159 (7%)
Query: 19 KSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKI 78
++E+++L K H ++ + + D +V E + G L + + R + K
Sbjct: 63 ETEIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 79 ALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPML---GDFGLAKTQREDSDYSTETGV 135
+ A +QYLHEN IIHRD+ P N+L++ E L DFG +K E S T +
Sbjct: 122 QMLLA--VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT---L 176
Query: 136 VGTLGYLAPEY---VECGKLSTKTDVYSFGVVLLQLITG 171
GT YLAPE V + D +S GV+L ++G
Sbjct: 177 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 77/166 (46%), Gaps = 19/166 (11%)
Query: 16 REFKSEVQVLSK-ARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
R+ E+++L + +H N++ L DG LV E + G L L K R E+
Sbjct: 65 RDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGEL---LDKILRQKFFSER 121
Query: 75 RMKIALGA-AKGLQYLHENNIIHRDMGPNNIL-VTHDFEP---MLGDFGLAKTQREDSDY 129
L K ++YLH ++HRD+ P+NIL V P + DFG AK R
Sbjct: 122 EASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLR----- 176
Query: 130 STETGVVG----TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
E G++ T ++APE ++ D++S G++L ++ G
Sbjct: 177 -AENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 79/158 (50%), Gaps = 7/158 (4%)
Query: 17 EFKSEVQVLSKARH-ENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKR 75
E E+ VL A+ V+ L + ++ +L+ EY G + +S
Sbjct: 74 EILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDV 133
Query: 76 MKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDF---EPMLGDFGLAKTQREDSDYSTE 132
+++ +G+ YLH+NNI+H D+ P NIL++ + + + DFG+++ +
Sbjct: 134 IRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELRE- 192
Query: 133 TGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
++GT YLAPE + ++T TD+++ G++ L+T
Sbjct: 193 --IMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLT 228
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 76/159 (47%), Gaps = 12/159 (7%)
Query: 19 KSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKI 78
++E+++L K H ++ + + D +V E + G L + + R + K
Sbjct: 202 ETEIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 260
Query: 79 ALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPML---GDFGLAKTQREDSDYSTETGV 135
+ A +QYLHEN IIHRD+ P N+L++ E L DFG +K E S T +
Sbjct: 261 QMLLA--VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT---L 315
Query: 136 VGTLGYLAPEY---VECGKLSTKTDVYSFGVVLLQLITG 171
GT YLAPE V + D +S GV+L ++G
Sbjct: 316 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 354
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 83/168 (49%), Gaps = 19/168 (11%)
Query: 17 EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSL---DQH---LSKHTRTPL 70
+FK+E+Q+++ ++E + G ++ ++ ++YEY+ N S+ D++ L K+ +
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFI 148
Query: 71 SWEKRMKIALGAAKGLQYLH-ENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDY 129
+ I Y+H E NI HRD+ P+NIL+ + L DFG +S+Y
Sbjct: 149 PIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFG-------ESEY 201
Query: 130 STETGVVGTLG---YLAPEYV--ECGKLSTKTDVYSFGVVLLQLITGL 172
+ + G+ G ++ PE+ E K D++S G+ L + +
Sbjct: 202 MVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNV 249
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 77/166 (46%), Gaps = 19/166 (11%)
Query: 16 REFKSEVQVLSK-ARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEK 74
R+ E+++L + +H N++ L DG LV E + G L L K R E+
Sbjct: 65 RDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGEL---LDKILRQKFFSER 121
Query: 75 RMKIALGA-AKGLQYLHENNIIHRDMGPNNIL-VTHDFEP---MLGDFGLAKTQREDSDY 129
L K ++YLH ++HRD+ P+NIL V P + DFG AK R
Sbjct: 122 EASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLR----- 176
Query: 130 STETGVVG----TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
E G++ T ++APE ++ D++S G++L ++ G
Sbjct: 177 -AENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 6/153 (3%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYE--YVCNGSLDQHLSKHTRTPLSWEKRMKI 78
E+ ++ H+N++ LL + K L ++ Y+ +D +L + + L E+ +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTP-QKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL 131
Query: 79 ALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
G+++LH IIHRD+ P+NI+V D + DFGLA+T T V T
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVT 188
Query: 139 LGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
Y APE + D++S G ++ ++I G
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 6/153 (3%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYE--YVCNGSLDQHLSKHTRTPLSWEKRMKI 78
E+ ++ H+N++ LL + K L ++ Y+ +D +L + + L E+ +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTP-QKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL 131
Query: 79 ALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
G+++LH IIHRD+ P+NI+V D + DFGLA+T T V T
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVT 188
Query: 139 LGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
Y APE + D++S G ++ ++I G
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 6/153 (3%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYE--YVCNGSLDQHLSKHTRTPLSWEKRMKI 78
E+ ++ H+N++ LL + K L ++ Y+ +D +L + + L E+ +
Sbjct: 74 ELVLMKCVNHKNIIGLLNVFTP-QKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL 132
Query: 79 ALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
G+++LH IIHRD+ P+NI+V D + DFGLA+T T V T
Sbjct: 133 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVT 189
Query: 139 LGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
Y APE + D++S G ++ ++I G
Sbjct: 190 RYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 73/153 (47%), Gaps = 9/153 (5%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIAL 80
E+ L RH +++ L + ++V EY G L ++ + R +R +
Sbjct: 59 EISYLKLLRHPHIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQI 117
Query: 81 GAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLG 140
A ++Y H + I+HRD+ P N+L+ + + DFGL+ + + T G+
Sbjct: 118 ICA--IEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC---GSPN 172
Query: 141 YLAPEYVECGKLST--KTDVYSFGVVLLQLITG 171
Y APE + GKL + DV+S G+VL ++ G
Sbjct: 173 YAAPEVIN-GKLYAGPEVDVWSCGIVLYVMLVG 204
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR--TPLSWEKRMK 77
+E ++L +V L S D + +V EYV G + HL + R P + +
Sbjct: 111 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 170
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
I L +YLH ++I+RD+ P N+L+ + DFG AK + + G
Sbjct: 171 IVLT----FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GATWTLCG 221
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T YLAPE + + D ++ GV++ ++ G
Sbjct: 222 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 7/167 (4%)
Query: 8 KDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR 67
K S++ ++ + E ++ +H N+V L S S+ L+++ V G L + + R
Sbjct: 47 KKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIV--AR 104
Query: 68 TPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPM---LGDFGLAKTQR 124
S + + + H+ ++HR++ P N+L+ + L DFGLA
Sbjct: 105 EYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAI--E 162
Query: 125 EDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
+ + G GT GYL+PE + D+++ GV+L L+ G
Sbjct: 163 VEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR--TPLSWEKRMK 77
+E ++L +V L S D + +V EYV G + HL + R P + +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
I L +YLH ++I+RD+ P N+L+ + DFG AK + + G
Sbjct: 150 IVLT----FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLAG 200
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T YLAPE + + D ++ GV++ ++ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 72/157 (45%), Gaps = 9/157 (5%)
Query: 18 FKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMK 77
FK E++++ H N++ L + D LV E G L + + H R +
Sbjct: 53 FKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVV-HKRV-FRESDAAR 110
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDF--EPM-LGDFGLAKTQREDSDYSTETG 134
I + Y H+ N+ HRD+ P N L D P+ L DFGLA + T+
Sbjct: 111 IMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK-- 168
Query: 135 VVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
VGT Y++P+ +E G + D +S GV++ L+ G
Sbjct: 169 -VGTPYYVSPQVLE-GLYGPECDEWSAGVMMYVLLCG 203
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 75/155 (48%), Gaps = 11/155 (7%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSL-DQHLSKHTRTPLSWEKRMKIA 79
EV VL + H N++ L D LV E G L D+ + + + + MK
Sbjct: 54 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQV 113
Query: 80 LGAAKGLQYLHENNIIHRDMGPNNILV---THDFEPMLGDFGLAKTQREDSDYSTETGVV 136
L G YLH++NI+HRD+ P N+L+ + D + DFGL+ E E +
Sbjct: 114 LS---GTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLS-AHFEVGGKMKER--L 167
Query: 137 GTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
GT Y+APE + K K DV+S GV+L L+ G
Sbjct: 168 GTAYYIAPEVLR-KKYDEKCDVWSCGVILYILLCG 201
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR--TPLSWEKRMK 77
+E ++L +V L S D + +V EYV G + HL + R P + +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQ 149
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
I L +YLH ++I+RD+ P N+L+ + DFG AK + + G
Sbjct: 150 IVLT----FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCG 200
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T YLAPE + + D ++ GV++ ++ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 78/174 (44%), Gaps = 8/174 (4%)
Query: 2 IAVKQHK-DASSQGDR--EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSL 58
+AVK K D SQ + +F EV + H N++ L G ++ V E GSL
Sbjct: 39 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSL 97
Query: 59 DQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFG 118
L KH L + A+ A+G+ YL IHRD+ N+L+ +GDFG
Sbjct: 98 LDRLRKHQGHFLL-GTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFG 156
Query: 119 LAKT--QREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
L + Q +D E V + APE ++ S +D + FGV L ++ T
Sbjct: 157 LMRALPQNDDHXVMQEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR--TPLSWEKRMK 77
+E ++L +V L S D + +V EYV G + HL + R P + +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
I L +YLH ++I+RD+ P N+L+ + DFG AK + + G
Sbjct: 150 IVLT----FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCG 200
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T YLAPE + + D ++ GV++ ++ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR--TPLSWEKRMK 77
+E ++L +V L S D + +V EYV G + HL + R P + +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQ 149
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
I L +YLH ++I+RD+ P N+L+ + DFG AK + + G
Sbjct: 150 IVLT----FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCG 200
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T YLAPE + + D ++ GV++ ++ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR--TPLSWEKRMK 77
+E ++L +V L S D + +V EYV G + HL + R P + +
Sbjct: 85 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQ 144
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
I L +YLH ++I+RD+ P N+L+ + DFG AK + + G
Sbjct: 145 IVLT----FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCG 195
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T YLAPE + + D ++ GV++ ++ G
Sbjct: 196 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 5/152 (3%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIAL 80
EV +L +H N+V L LV+EY+ + L Q+L ++
Sbjct: 50 EVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYL-DKDLKQYLDD-CGNIINMHNVKLFLF 107
Query: 81 GAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLG 140
+GL Y H ++HRD+ P N+L+ E L DFGLA+ + + T V TL
Sbjct: 108 QLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT--KTYDNEVVTLW 165
Query: 141 YLAPE-YVECGKLSTKTDVYSFGVVLLQLITG 171
Y P+ + ST+ D++ G + ++ TG
Sbjct: 166 YRPPDILLGSTDYSTQIDMWGVGCIFYEMATG 197
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 72/157 (45%), Gaps = 9/157 (5%)
Query: 18 FKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMK 77
FK E++++ H N++ L + D LV E G L + + H R +
Sbjct: 70 FKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVV-HKRV-FRESDAAR 127
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDF--EPM-LGDFGLAKTQREDSDYSTETG 134
I + Y H+ N+ HRD+ P N L D P+ L DFGLA + T+
Sbjct: 128 IMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK-- 185
Query: 135 VVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
VGT Y++P+ +E G + D +S GV++ L+ G
Sbjct: 186 -VGTPYYVSPQVLE-GLYGPECDEWSAGVMMYVLLCG 220
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 83/191 (43%), Gaps = 28/191 (14%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSW-EKRMKIA 79
E+ +L++ H++VV +L + YV D K RTP+ E +K
Sbjct: 102 EIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTL 161
Query: 80 L-GAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKT---------------Q 123
L G++Y+H I+HRD+ P N LV D + DFGLA+T +
Sbjct: 162 LYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPR 221
Query: 124 REDSDYSTE----------TGVVGTLGYLAPEYVECGKLSTKT-DVYSFGVVLLQLITGL 172
+D + T TG V T Y APE + + T+ DV+S G + +L+ +
Sbjct: 222 EDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMI 281
Query: 173 KTNDKTLGEKG 183
K N ++G
Sbjct: 282 KENVAYHADRG 292
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 5/152 (3%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRL-LVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIA 79
E +VL+ + L SC RL V EYV G L H+ + + + + A
Sbjct: 69 EKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGK--FKEPQAVFYA 126
Query: 80 LGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTL 139
+ GL +LH+ II+RD+ +N+++ + + DFG+ K D + E GT
Sbjct: 127 AEISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTRE--FCGTP 184
Query: 140 GYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
Y+APE + D +++GV+L +++ G
Sbjct: 185 DYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAG 216
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR--TPLSWEKRMK 77
+E ++L +V L S D + +V EYV G + HL + R P + +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
I L +YLH ++I+RD+ P N+L+ + DFG AK + + G
Sbjct: 150 IVLT----FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCG 200
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T YLAPE + + D ++ GV++ ++ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR--TPLSWEKRMK 77
+E ++L +V L S D + +V EYV G + HL + R P + +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQ 149
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
I L +YLH ++I+RD+ P N+L+ + DFG AK + + G
Sbjct: 150 IVLT----FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCG 200
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T YLAPE + + D ++ GV++ ++ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 76/151 (50%), Gaps = 6/151 (3%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYE--YVCNGSLDQHLSKHTRTPLSWEKRMKI 78
E+ ++ H+N++ LL + K L ++ Y+ +D +L + + L E+ +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFT-PQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL 131
Query: 79 ALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
G+++LH IIHRD+ P+NI+V D + DFGLA+T + + E VV T
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMEPEVV-T 188
Query: 139 LGYLAPEYVECGKLSTKTDVYSFGVVLLQLI 169
Y APE + D++S G ++ +++
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR--TPLSWEKRMK 77
+E ++L +V L S D + +V EYV G + HL + R P + +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQ 149
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
I L +YLH ++I+RD+ P N+L+ + DFG AK + + G
Sbjct: 150 IVLT----FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCG 200
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T YLAPE + + D ++ GV++ ++ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR--TPLSWEKRMK 77
+E ++L +V L S D + +V EYV G + HL + R P + +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
I L +YLH ++I+RD+ P N+L+ + DFG AK + + G
Sbjct: 150 IVLT----FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCG 200
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T YLAPE + + D ++ GV++ ++ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR--TPLSWEKRMK 77
+E ++L +V L S D + +V EYV G + HL + R P + +
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 150
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
I L +YLH ++I+RD+ P N+L+ + DFG AK + + G
Sbjct: 151 IVLT----FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCG 201
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T YLAPE + + D ++ GV++ ++ G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR--TPLSWEKRMK 77
+E ++L +V L S D + +V EYV G + HL + R P + +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
I L +YLH ++I+RD+ P N+L+ + DFG AK + + G
Sbjct: 150 IVLT----FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLXG 200
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T YLAPE + + D ++ GV++ ++ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR--TPLSWEKRMK 77
+E ++L +V L S D + +V EYV G + HL + R P + +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
I L +YLH ++I+RD+ P N+L+ + DFG AK + + G
Sbjct: 150 IVLT----FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCG 200
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T YLAPE + + D ++ GV++ ++ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR--TPLSWEKRMK 77
+E ++L +V L S D + +V EYV G + HL + R P + +
Sbjct: 77 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 136
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
I L +YLH ++I+RD+ P N+L+ + DFG AK + + G
Sbjct: 137 IVLT----FEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVK-----GRTWXLCG 187
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T YLAPE + + D ++ GV++ ++ G
Sbjct: 188 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR--TPLSWEKRMK 77
+E ++L +V L S D + +V EYV G + HL + R P + +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
I L +YLH ++I+RD+ P N+L+ + DFG AK + + G
Sbjct: 150 IVLT----FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCG 200
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T YLAPE + + D ++ GV++ ++ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR--TPLSWEKRMK 77
+E ++L +V L S D + +V EYV G + HL + R P + +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
I L +YLH ++I+RD+ P N+L+ + DFG AK + + G
Sbjct: 150 IVLT----FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCG 200
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T YLAPE + + D ++ GV++ ++ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR--TPLSWEKRMK 77
+E ++L +V L S D + +V EYV G + HL + R P + +
Sbjct: 111 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQ 170
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
I L +YLH ++I+RD+ P N+L+ + DFG AK + + G
Sbjct: 171 IVLT----FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCG 221
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T YLAPE + + D ++ GV++ ++ G
Sbjct: 222 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 78/174 (44%), Gaps = 8/174 (4%)
Query: 2 IAVKQHK-DASSQGDR--EFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSL 58
+AVK K D SQ + +F EV + H N++ L G ++ V E GSL
Sbjct: 49 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSL 107
Query: 59 DQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFG 118
L KH L + A+ A+G+ YL IHRD+ N+L+ +GDFG
Sbjct: 108 LDRLRKHQGHFLL-GTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFG 166
Query: 119 LAKT--QREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLIT 170
L + Q +D E V + APE ++ S +D + FGV L ++ T
Sbjct: 167 LMRALPQNDDHXVMQEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 81/189 (42%), Gaps = 15/189 (7%)
Query: 18 FKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMK 77
F E +++ A VV L + D +V EY+ G L +S + P W +
Sbjct: 116 FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD-VPEKWARFYT 174
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
+ A L +H IHRD+ P+N+L+ L DFG ++ +T VG
Sbjct: 175 AEVVLA--LDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA-VG 231
Query: 138 TLGYLAPEYVEC----GKLSTKTDVYSFGVVLLQLITGLKTNDKTLGEKGLVGWARPLLK 193
T Y++PE ++ G + D +S GV L +++ G D LVG ++
Sbjct: 232 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG----DTPFYADSLVGTYSKIMN 287
Query: 194 ERN---YPD 199
+N +PD
Sbjct: 288 HKNSLTFPD 296
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 76/153 (49%), Gaps = 6/153 (3%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYE--YVCNGSLDQHLSKHTRTPLSWEKRMKI 78
E+ ++ H+N++ LL + K L ++ Y+ +D +L + + L E+ +
Sbjct: 75 ELVLMKCVNHKNIIGLLNVFTP-QKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL 133
Query: 79 ALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
G+++LH IIHRD+ P+NI+V D + DFGLA+T + + VV T
Sbjct: 134 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMVPFVV-T 190
Query: 139 LGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
Y APE + D++S G ++ ++I G
Sbjct: 191 RYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 81/189 (42%), Gaps = 15/189 (7%)
Query: 18 FKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMK 77
F E +++ A VV L + D +V EY+ G L +S + P W +
Sbjct: 121 FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD-VPEKWARFYT 179
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
+ A L +H IHRD+ P+N+L+ L DFG ++ +T VG
Sbjct: 180 AEVVLA--LDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA-VG 236
Query: 138 TLGYLAPEYVEC----GKLSTKTDVYSFGVVLLQLITGLKTNDKTLGEKGLVGWARPLLK 193
T Y++PE ++ G + D +S GV L +++ G D LVG ++
Sbjct: 237 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG----DTPFYADSLVGTYSKIMN 292
Query: 194 ERN---YPD 199
+N +PD
Sbjct: 293 HKNSLTFPD 301
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 81/189 (42%), Gaps = 15/189 (7%)
Query: 18 FKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMK 77
F E +++ A VV L + D +V EY+ G L +S + P W +
Sbjct: 121 FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD-VPEKWARFYT 179
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
+ A L +H IHRD+ P+N+L+ L DFG ++ +T VG
Sbjct: 180 AEVVLA--LDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA-VG 236
Query: 138 TLGYLAPEYVEC----GKLSTKTDVYSFGVVLLQLITGLKTNDKTLGEKGLVGWARPLLK 193
T Y++PE ++ G + D +S GV L +++ G D LVG ++
Sbjct: 237 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG----DTPFYADSLVGTYSKIMN 292
Query: 194 ERN---YPD 199
+N +PD
Sbjct: 293 HKNSLTFPD 301
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 68/152 (44%), Gaps = 5/152 (3%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRL-LVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIA 79
E +VL+ + L SC RL V EYV G L H+ + R + A
Sbjct: 70 EKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGR--FKEPHAVFYA 127
Query: 80 LGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTL 139
A GL +L II+RD+ +N+++ + + DFG+ K D T GT
Sbjct: 128 AEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG--VTTKXFCGTP 185
Query: 140 GYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
Y+APE + D ++FGV+L +++ G
Sbjct: 186 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAG 217
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 6/151 (3%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYE--YVCNGSLDQHLSKHTRTPLSWEKRMKI 78
E+ ++ H+N++ LL + K L ++ Y+ +D +L + + L E+ +
Sbjct: 73 ELVLMKXVNHKNIISLLNVFT-PQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYL 131
Query: 79 ALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
G+++LH IIHRD+ P+NI+V D + DFGLA+T T V T
Sbjct: 132 LYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPYVVT 188
Query: 139 LGYLAPEYVECGKLSTKTDVYSFGVVLLQLI 169
Y APE + D++S G ++ +++
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 83/183 (45%), Gaps = 18/183 (9%)
Query: 21 EVQVLSKAR-HENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIA 79
EV++L + + H NV+ L+ + ++ LV+E + GS+ H+ H R + + +
Sbjct: 60 EVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHI--HKRRHFNELEASVVV 117
Query: 80 LGAAKGLQYLHENNIIHRDMGPNNILVTH--DFEPM-LGDFGLAKTQREDSDYSTET--- 133
A L +LH I HRD+ P NIL H P+ + DF L + + D S +
Sbjct: 118 QDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPE 177
Query: 134 --GVVGTLGYLAPEYVECGK-----LSTKTDVYSFGVVLLQLITGLKTNDKTLGEKGLVG 186
G+ Y+APE VE + D++S GV+L L++G G G
Sbjct: 178 LLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSD--CG 235
Query: 187 WAR 189
W R
Sbjct: 236 WDR 238
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 13/167 (7%)
Query: 14 GDREFKSEVQVLSKARHENVVMLLGSCSDGNKR--LLVYEYVCNGSLDQHLSK--HTRTP 69
G+ K E+Q+L + RH+NV+ L+ + K+ +V EY C + + L R P
Sbjct: 49 GEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEY-CVCGMQEMLDSVPEKRFP 107
Query: 70 LSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDY 129
+ L GL+YLH I+H+D+ P N+L+T + G+A+ +
Sbjct: 108 VCQAHGYFCQL--IDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAAD 165
Query: 130 STETGVVGTLGYLAPEYVECGKLST----KTDVYSFGVVLLQLITGL 172
T G+ + PE L T K D++S GV L + TGL
Sbjct: 166 DTCRTSQGSPAFQPPEIAN--GLDTFSGFKVDIWSAGVTLYNITTGL 210
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR--TPLSWEKRMK 77
+E ++L +V L S D + +V EYV G + HL + R P + +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
I L +YLH ++I+RD+ P N+L+ + DFG AK + + G
Sbjct: 150 IVLT----FEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK-----GRTWXLCG 200
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T YLAPE + + D ++ GV++ ++ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 68/152 (44%), Gaps = 5/152 (3%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRL-LVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIA 79
E +VL+ + L SC RL V EYV G L H+ + R + A
Sbjct: 391 EKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGR--FKEPHAVFYA 448
Query: 80 LGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTL 139
A GL +L II+RD+ +N+++ + + DFG+ K D T GT
Sbjct: 449 AEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG--VTTKXFCGTP 506
Query: 140 GYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
Y+APE + D ++FGV+L +++ G
Sbjct: 507 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAG 538
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 76/151 (50%), Gaps = 6/151 (3%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYE--YVCNGSLDQHLSKHTRTPLSWEKRMKI 78
E+ ++ H+N++ LL + K L ++ Y+ +D +L + + L E+ +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFT-PQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL 131
Query: 79 ALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
G+++LH IIHRD+ P+NI+V D + DFGLA+T + + E VV T
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMEPEVV-T 188
Query: 139 LGYLAPEYVECGKLSTKTDVYSFGVVLLQLI 169
Y APE + D++S G ++ +++
Sbjct: 189 RYYRAPEVILGMGYKENVDLWSVGCIMGEMV 219
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 82/164 (50%), Gaps = 19/164 (11%)
Query: 21 EVQVLSKARHENVVMLLGSC----SDGNK----RLLVYEYV---CNGSLDQHLSKHTRTP 69
E+++L +HENVV L+ C S N+ LV+++ G L L K T +
Sbjct: 67 EIKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSE 126
Query: 70 LSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK--TQREDS 127
+ ++ M++ L GL Y+H N I+HRDM N+L+T D L DFGLA+ + ++S
Sbjct: 127 I--KRVMQMLLN---GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNS 181
Query: 128 DYSTETGVVGTLGYLAPEYVECGK-LSTKTDVYSFGVVLLQLIT 170
+ V TL Y PE + + D++ G ++ ++ T
Sbjct: 182 QPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 82/164 (50%), Gaps = 19/164 (11%)
Query: 21 EVQVLSKARHENVVMLLGSC----SDGNK----RLLVYEYV---CNGSLDQHLSKHTRTP 69
E+++L +HENVV L+ C S N+ LV+++ G L L K T +
Sbjct: 66 EIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE 125
Query: 70 LSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK--TQREDS 127
+ ++ M++ L GL Y+H N I+HRDM N+L+T D L DFGLA+ + ++S
Sbjct: 126 I--KRVMQMLLN---GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNS 180
Query: 128 DYSTETGVVGTLGYLAPEYVECGK-LSTKTDVYSFGVVLLQLIT 170
+ V TL Y PE + + D++ G ++ ++ T
Sbjct: 181 QPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 224
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR--TPLSWEKRMK 77
+E ++L +V L S D + +V EYV G + HL + R P + +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
I L +YLH ++I+RD+ P N+++ + DFG AK + + G
Sbjct: 150 IVLT----FEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVK-----GRTWXLCG 200
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T YLAPE + + D ++ GV++ ++ G
Sbjct: 201 TPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR--TPLSWEKRMK 77
+E ++L +V L S D + +V EYV G + HL + R P + +
Sbjct: 83 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQ 142
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
I L +YLH ++I+RD+ P N+L+ + DFG AK + + G
Sbjct: 143 IVLT----FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCG 193
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T YLAPE + + D ++ GV++ ++ G
Sbjct: 194 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 82/164 (50%), Gaps = 19/164 (11%)
Query: 21 EVQVLSKARHENVVMLLGSC----SDGNK----RLLVYEYV---CNGSLDQHLSKHTRTP 69
E+++L +HENVV L+ C S N+ LV+++ G L L K T +
Sbjct: 67 EIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE 126
Query: 70 LSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK--TQREDS 127
+ ++ M++ L GL Y+H N I+HRDM N+L+T D L DFGLA+ + ++S
Sbjct: 127 I--KRVMQMLLN---GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNS 181
Query: 128 DYSTETGVVGTLGYLAPEYVECGK-LSTKTDVYSFGVVLLQLIT 170
+ V TL Y PE + + D++ G ++ ++ T
Sbjct: 182 QPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 82/164 (50%), Gaps = 19/164 (11%)
Query: 21 EVQVLSKARHENVVMLLGSC----SDGNK----RLLVYEYV---CNGSLDQHLSKHTRTP 69
E+++L +HENVV L+ C S N+ LV+++ G L L K T +
Sbjct: 67 EIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE 126
Query: 70 LSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAK--TQREDS 127
+ ++ M++ L GL Y+H N I+HRDM N+L+T D L DFGLA+ + ++S
Sbjct: 127 I--KRVMQMLLN---GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNS 181
Query: 128 DYSTETGVVGTLGYLAPEYVECGK-LSTKTDVYSFGVVLLQLIT 170
+ V TL Y PE + + D++ G ++ ++ T
Sbjct: 182 QPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR--TPLSWEKRMK 77
+E ++L +V L S D + +V EYV G + HL + R P + +
Sbjct: 83 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 142
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
I L +YLH ++I+RD+ P N+L+ + DFG AK + + G
Sbjct: 143 IVLT----FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCG 193
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T YLAPE + + D ++ GV++ ++ G
Sbjct: 194 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 67/152 (44%), Gaps = 7/152 (4%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIA 79
+E ++L +V L S D + +V EYV G + HL + R S A
Sbjct: 76 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYA 133
Query: 80 LGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTL 139
+YLH ++I+RD+ P N+L+ + DFG AK + + GT
Sbjct: 134 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWTLCGTP 188
Query: 140 GYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
YLAPE + + D ++ GV++ ++ G
Sbjct: 189 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR--TPLSWEKRMK 77
+E ++L +V L S D + +V EYV G + HL + R P + +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQ 149
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
I L +YLH ++I+RD+ P N+L+ + DFG AK + + G
Sbjct: 150 IVLT----FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCG 200
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T YLAPE + + D ++ GV++ ++ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR--TPLSWEKRMK 77
+E ++L +V L S D + +V EYV G + HL + R P + +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
I L +YLH ++I+RD+ P N+L+ + DFG AK + + G
Sbjct: 150 IVLT----FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCG 200
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T YLAPE + + D ++ GV++ ++ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR--TPLSWEKRMK 77
+E ++L +V L S D + +V EYV G + HL + R P + +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
I L +YLH ++I+RD+ P N+L+ + DFG AK + + G
Sbjct: 150 IVLT----FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCG 200
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T YLAPE + + D ++ GV++ ++ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR--TPLSWEKRMK 77
+E ++L +V L S D + +V EYV G + HL + R P + +
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 150
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
I L +YLH ++I+RD+ P N+L+ + DFG AK + + G
Sbjct: 151 IVLT----FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCG 201
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T YLAPE + + D ++ GV++ ++ G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR--TPLSWEKRMK 77
+E ++L +V L S D + +V EYV G + HL + R P + +
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 150
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
I L +YLH ++I+RD+ P N+L+ + DFG AK + + G
Sbjct: 151 IVLT----FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCG 201
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T YLAPE + + D ++ GV++ ++ G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR--TPLSWEKRMK 77
+E ++L +V L S D + +V EYV G + HL + R P + +
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 150
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
I L +YLH ++I+RD+ P N+L+ + DFG AK + + G
Sbjct: 151 IVLT----FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCG 201
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T YLAPE + + D ++ GV++ ++ G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR--TPLSWEKRMK 77
+E ++L +V L S D + +V EYV G + HL + R P + +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQ 149
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
I L +YLH ++I+RD+ P N+L+ + DFG AK + + G
Sbjct: 150 IVLT----FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCG 200
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T YLAPE + + D ++ GV++ ++ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 6/151 (3%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYE--YVCNGSLDQHLSKHTRTPLSWEKRMKI 78
E+ ++ H+N++ LL + K L ++ Y+ +D +L + + L E+ +
Sbjct: 66 ELVLMKCVNHKNIISLLNVFT-PQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYL 124
Query: 79 ALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
G+++LH IIHRD+ P+NI+V D + DFGLA+T T V T
Sbjct: 125 LYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPYVVT 181
Query: 139 LGYLAPEYVECGKLSTKTDVYSFGVVLLQLI 169
Y APE + D++S G ++ +++
Sbjct: 182 RYYRAPEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR--TPLSWEKRMK 77
+E ++L +V L S D + +V EYV G + HL + R P + +
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQ 150
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
I L +YLH ++I+RD+ P N+L+ + DFG AK + + G
Sbjct: 151 IVLT----FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCG 201
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T YLAPE + + D ++ GV++ ++ G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR--TPLSWEKRMK 77
+E ++L +V L S D + +V EYV G + HL + R P + +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
I L +YLH ++I+RD+ P N+L+ + DFG AK + + G
Sbjct: 150 IVLT----FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCG 200
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T YLAPE + + D ++ GV++ ++ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR--TPLSWEKRMK 77
+E ++L +V L S D + +V EYV G + HL + R P + +
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 150
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
I L +YLH ++I+RD+ P N+L+ + DFG AK + + G
Sbjct: 151 IVLT----FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCG 201
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T YLAPE + + D ++ GV++ ++ G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR--TPLSWEKRMK 77
+E ++L +V L S D + +V EYV G + HL + R P + +
Sbjct: 111 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 170
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
I L +YLH ++I+RD+ P N+L+ + DFG AK + + G
Sbjct: 171 IVLT----FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCG 221
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T YLAPE + + D ++ GV++ ++ G
Sbjct: 222 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR--TPLSWEKRMK 77
+E ++L +V L S D + +V EYV G + HL + R P + +
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 150
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
I L +YLH ++I+RD+ P N+L+ + DFG AK + + G
Sbjct: 151 IVLT----FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWTLCG 201
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T YLAPE + + D ++ GV++ ++ G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 6/151 (3%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYE--YVCNGSLDQHLSKHTRTPLSWEKRMKI 78
E+ ++ H+N++ LL + K L ++ Y+ +D +L + + L E+ +
Sbjct: 73 ELVLMKCVNHKNIISLLNVFT-PQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYL 131
Query: 79 ALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
G+++LH IIHRD+ P+NI+V D + DFGLA+T T V T
Sbjct: 132 LYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPYVVT 188
Query: 139 LGYLAPEYVECGKLSTKTDVYSFGVVLLQLI 169
Y APE + D++S G ++ +++
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR--TPLSWEKRMK 77
+E ++L +V L S D + +V EYV G + HL + R P + +
Sbjct: 90 NEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
I L +YLH ++I+RD+ P N+L+ + DFG AK + + G
Sbjct: 150 IVLT----FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCG 200
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T YLAPE + + D ++ GV++ ++ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 70/144 (48%), Gaps = 8/144 (5%)
Query: 33 VVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIALGAA-KGLQYLHE 91
+V L G+ +G + E + GSL Q + + P E R LG A +GL+YLH
Sbjct: 128 IVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLP---EDRALYYLGQALEGLEYLHS 184
Query: 92 NNIIHRDMGPNNILVTHD-FEPMLGDFGLAKTQREDS---DYSTETGVVGTLGYLAPEYV 147
I+H D+ +N+L++ D L DFG A + D D T + GT ++APE V
Sbjct: 185 RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVV 244
Query: 148 ECGKLSTKTDVYSFGVVLLQLITG 171
K DV+S ++L ++ G
Sbjct: 245 LGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR--TPLSWEKRMK 77
+E ++L +V L S D + +V EYV G + HL + R P + +
Sbjct: 90 NEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
I L +YLH ++I+RD+ P N+L+ + DFG AK + + G
Sbjct: 150 IVLT----FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCG 200
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T YLAPE + + D ++ GV++ ++ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 66/132 (50%), Gaps = 13/132 (9%)
Query: 44 NKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKI-ALGAAKGLQYLHENNIIHRDMGPN 102
+K + + + G L HLS+H + E M+ A GL+++H +++RD+ P
Sbjct: 265 DKLSFILDLMNGGDLHYHLSQHG---VFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPA 321
Query: 103 NILVTHDFEPMLGDFGLAKTQREDSDYSTET--GVVGTLGYLAPEYVECG-KLSTKTDVY 159
NIL+ + D GLA D+S + VGT GY+APE ++ G + D +
Sbjct: 322 NILLDEHGHVRISDLGLA------CDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWF 375
Query: 160 SFGVVLLQLITG 171
S G +L +L+ G
Sbjct: 376 SLGCMLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 66/132 (50%), Gaps = 13/132 (9%)
Query: 44 NKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKI-ALGAAKGLQYLHENNIIHRDMGPN 102
+K + + + G L HLS+H + E M+ A GL+++H +++RD+ P
Sbjct: 265 DKLSFILDLMNGGDLHYHLSQHG---VFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPA 321
Query: 103 NILVTHDFEPMLGDFGLAKTQREDSDYSTET--GVVGTLGYLAPEYVECG-KLSTKTDVY 159
NIL+ + D GLA D+S + VGT GY+APE ++ G + D +
Sbjct: 322 NILLDEHGHVRISDLGLA------CDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWF 375
Query: 160 SFGVVLLQLITG 171
S G +L +L+ G
Sbjct: 376 SLGCMLFKLLRG 387
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 66/132 (50%), Gaps = 13/132 (9%)
Query: 44 NKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKI-ALGAAKGLQYLHENNIIHRDMGPN 102
+K + + + G L HLS+H + E M+ A GL+++H +++RD+ P
Sbjct: 264 DKLSFILDLMNGGDLHYHLSQHG---VFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPA 320
Query: 103 NILVTHDFEPMLGDFGLAKTQREDSDYSTET--GVVGTLGYLAPEYVECG-KLSTKTDVY 159
NIL+ + D GLA D+S + VGT GY+APE ++ G + D +
Sbjct: 321 NILLDEHGHVRISDLGLA------CDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWF 374
Query: 160 SFGVVLLQLITG 171
S G +L +L+ G
Sbjct: 375 SLGCMLFKLLRG 386
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 66/132 (50%), Gaps = 13/132 (9%)
Query: 44 NKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKI-ALGAAKGLQYLHENNIIHRDMGPN 102
+K + + + G L HLS+H + E M+ A GL+++H +++RD+ P
Sbjct: 265 DKLSFILDLMNGGDLHYHLSQHG---VFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPA 321
Query: 103 NILVTHDFEPMLGDFGLAKTQREDSDYSTET--GVVGTLGYLAPEYVECG-KLSTKTDVY 159
NIL+ + D GLA D+S + VGT GY+APE ++ G + D +
Sbjct: 322 NILLDEHGHVRISDLGLA------CDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWF 375
Query: 160 SFGVVLLQLITG 171
S G +L +L+ G
Sbjct: 376 SLGCMLFKLLRG 387
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 102/222 (45%), Gaps = 29/222 (13%)
Query: 2 IAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLL--------------GSCSDGNKRL 47
+A+K+ Q + E++++ + H+N+V + GS ++ N
Sbjct: 39 VAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVY 98
Query: 48 LVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILV- 106
+V EY+ L L + PL E +GL+Y+H N++HRD+ P N+ +
Sbjct: 99 IVQEYM-ETDLANVLEQ---GPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFIN 154
Query: 107 THDFEPMLGDFGLAKTQREDSDYSTE----TGVVGTLGYLAPEYVECGKLSTKT-DVYSF 161
T D +GDFGLA+ D YS + G+V T Y +P + TK D+++
Sbjct: 155 TEDLVLKIGDFGLARIM--DPHYSHKGHLSEGLV-TKWYRSPRLLLSPNNYTKAIDMWAA 211
Query: 162 GVVLLQLITG--LKTNDKTLGEKGLVGWARPLLKERNYPDLI 201
G + +++TG L L + L+ + P++ E + +L+
Sbjct: 212 GCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELL 253
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR--TPLSWEKRMK 77
+E ++L +V L S D + +V EYV G + HL + R P + +
Sbjct: 90 NEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
I L +YLH ++I+RD+ P N+L+ + DFG AK + + G
Sbjct: 150 IVLT----FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCG 200
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T YLAPE + + D ++ GV++ ++ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 6/151 (3%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYE--YVCNGSLDQHLSKHTRTPLSWEKRMKI 78
E+ ++ H+N++ LL + K L ++ Y+ +D +L + + L E+ +
Sbjct: 73 ELVLMKXVNHKNIISLLNVFT-PQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYL 131
Query: 79 ALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
G+++LH IIHRD+ P+NI+V D + DFGLA+T T V T
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPYVVT 188
Query: 139 LGYLAPEYVECGKLSTKTDVYSFGVVLLQLI 169
Y APE + D++S G ++ +++
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 6/151 (3%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYE--YVCNGSLDQHLSKHTRTPLSWEKRMKI 78
E+ ++ H+N++ LL + K L ++ Y+ +D +L + + L E+ +
Sbjct: 73 ELVLMKXVNHKNIISLLNVFT-PQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL 131
Query: 79 ALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
G+++LH IIHRD+ P+NI+V D + DFGLA+T T V T
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPYVVT 188
Query: 139 LGYLAPEYVECGKLSTKTDVYSFGVVLLQLI 169
Y APE + D++S G ++ +++
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 46/104 (44%), Gaps = 13/104 (12%)
Query: 84 KGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDY------------ST 131
+ L Y+H IIHR++ P NI + +GDFGLAK D
Sbjct: 127 EALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDN 186
Query: 132 ETGVVGTLGYLAPEYVE-CGKLSTKTDVYSFGVVLLQLITGLKT 174
T +GT Y+A E ++ G + K D YS G++ + I T
Sbjct: 187 LTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIYPFST 230
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 72/164 (43%), Gaps = 17/164 (10%)
Query: 18 FKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSK-HTRTPLSWEK-- 74
F+ E VL + + L + D N LV +Y G L LSK R P +
Sbjct: 121 FREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFY 180
Query: 75 --RMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTE 132
M IA+ + L Y +HRD+ P+NIL+ + L DFG ED +
Sbjct: 181 LAEMVIAIDSVHQLHY------VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSS 234
Query: 133 TGVVGTLGYLAPEYVEC-----GKLSTKTDVYSFGVVLLQLITG 171
VGT Y++PE ++ G+ + D +S GV + +++ G
Sbjct: 235 VA-VGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYG 277
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR--TPLSWEKRMK 77
+E ++L +V L S D + +V EY+ G + HL + R P + +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
I L +YLH ++I+RD+ P N+L+ + DFG AK + + G
Sbjct: 150 IVLT----FEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK-----GRTWXLCG 200
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T YLAPE + + D ++ GV++ ++ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR--TPLSWEKRMK 77
+E ++L +V L S D + +V EY+ G + HL + R P + +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
I L +YLH ++I+RD+ P N+L+ + DFG AK + + G
Sbjct: 150 IVLT----FEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK-----GRTWXLCG 200
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T YLAPE + + D ++ GV++ ++ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 6/128 (4%)
Query: 47 LLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILV 106
L+V E + G L + + + +I + +QYLH NI HRD+ P N+L
Sbjct: 135 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLY 194
Query: 107 THDFEPM---LGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGV 163
T L DFG AK E + +++ T T Y+APE + K D++S GV
Sbjct: 195 TSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGV 251
Query: 164 VLLQLITG 171
++ L+ G
Sbjct: 252 IMYILLCG 259
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 6/151 (3%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYE--YVCNGSLDQHLSKHTRTPLSWEKRMKI 78
E+ ++ H+N++ LL + K L ++ Y+ +D +L + + L E+ +
Sbjct: 67 ELVLMKCVNHKNIISLLNVFT-PQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL 125
Query: 79 ALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
G+++LH IIHRD+ P+NI+V D + DFGLA+T T V T
Sbjct: 126 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVT 182
Query: 139 LGYLAPEYVECGKLSTKTDVYSFGVVLLQLI 169
Y APE + D++S G ++ +++
Sbjct: 183 RYYRAPEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 52/100 (52%), Gaps = 8/100 (8%)
Query: 77 KIALGAAKGLQYLHEN-NIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGV 135
KI L K L +L EN IIHRD+ P+NIL+ L DFG++ Q DS T
Sbjct: 129 KITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGIS-GQLVDSIAKTRDA- 186
Query: 136 VGTLGYLAPEYVECGK----LSTKTDVYSFGVVLLQLITG 171
G Y+APE ++ ++DV+S G+ L +L TG
Sbjct: 187 -GCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATG 225
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 69/154 (44%), Gaps = 11/154 (7%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR--TPLSWEKRMK 77
+E ++L +V L S D + +V EYV G + HL + R P + +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
I L +YLH ++I+RD+ P N+L+ + DFG AK + + G
Sbjct: 150 IVLT----FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCG 200
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T YLAP + + D ++ GV++ ++ G
Sbjct: 201 TPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 6/128 (4%)
Query: 47 LLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILV 106
L+V E + G L + + + +I + +QYLH NI HRD+ P N+L
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLY 150
Query: 107 THDFEPM---LGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGV 163
T L DFG AK E + +++ T T Y+APE + K D++S GV
Sbjct: 151 TSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGV 207
Query: 164 VLLQLITG 171
++ L+ G
Sbjct: 208 IMYILLCG 215
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 61/129 (47%), Gaps = 8/129 (6%)
Query: 47 LLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILV 106
L+V E + G L + + + +I + +QYLH NI HRD+ P N+L
Sbjct: 96 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLY 155
Query: 107 THDFEP----MLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFG 162
T P L DFG AK E + +++ T T Y+APE + K D++S G
Sbjct: 156 TSK-RPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLG 211
Query: 163 VVLLQLITG 171
V++ L+ G
Sbjct: 212 VIMYILLCG 220
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 6/151 (3%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYE--YVCNGSLDQHLSKHTRTPLSWEKRMKI 78
E+ ++ H+N++ LL + K L ++ Y+ +D +L + + L E+ +
Sbjct: 74 ELVLMKCVNHKNIISLLNVFT-PQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL 132
Query: 79 ALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
G+++LH IIHRD+ P+NI+V D + DFGLA+T T V T
Sbjct: 133 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVT 189
Query: 139 LGYLAPEYVECGKLSTKTDVYSFGVVLLQLI 169
Y APE + D++S G ++ +++
Sbjct: 190 RYYRAPEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 6/128 (4%)
Query: 47 LLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILV 106
L+V E + G L + + + +I + +QYLH NI HRD+ P N+L
Sbjct: 89 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLY 148
Query: 107 THDFEPM---LGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGV 163
T L DFG AK E + +++ T T Y+APE + K D++S GV
Sbjct: 149 TSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGV 205
Query: 164 VLLQLITG 171
++ L+ G
Sbjct: 206 IMYILLCG 213
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 6/151 (3%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYE--YVCNGSLDQHLSKHTRTPLSWEKRMKI 78
E+ ++ H+N++ LL + K L ++ Y+ +D +L + + L E+ +
Sbjct: 72 ELVLMKCVNHKNIISLLNVFT-PQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL 130
Query: 79 ALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
G+++LH IIHRD+ P+NI+V D + DFGLA+T T V T
Sbjct: 131 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVT 187
Query: 139 LGYLAPEYVECGKLSTKTDVYSFGVVLLQLI 169
Y APE + D++S G ++ +++
Sbjct: 188 RYYRAPEVILGMGYKENVDIWSVGCIMGEMV 218
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 6/151 (3%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYE--YVCNGSLDQHLSKHTRTPLSWEKRMKI 78
E+ ++ H+N++ LL + K L ++ Y+ +D +L + + L E+ +
Sbjct: 73 ELVLMKCVNHKNIISLLNVFT-PQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL 131
Query: 79 ALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
G+++LH IIHRD+ P+NI+V D + DFGLA+T T V T
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVT 188
Query: 139 LGYLAPEYVECGKLSTKTDVYSFGVVLLQLI 169
Y APE + D++S G ++ +++
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 61/129 (47%), Gaps = 8/129 (6%)
Query: 47 LLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILV 106
L+V E + G L + + + +I + +QYLH NI HRD+ P N+L
Sbjct: 95 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLY 154
Query: 107 THDFEP----MLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFG 162
T P L DFG AK E + +++ T T Y+APE + K D++S G
Sbjct: 155 TSK-RPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLG 210
Query: 163 VVLLQLITG 171
V++ L+ G
Sbjct: 211 VIMYILLCG 219
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 6/151 (3%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYE--YVCNGSLDQHLSKHTRTPLSWEKRMKI 78
E+ ++ H+N++ LL + K L ++ Y+ +D +L + + L E+ +
Sbjct: 73 ELVLMKCVNHKNIISLLNVFT-PQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL 131
Query: 79 ALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
G+++LH IIHRD+ P+NI+V D + DFGLA+T T V T
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVT 188
Query: 139 LGYLAPEYVECGKLSTKTDVYSFGVVLLQLI 169
Y APE + D++S G ++ +++
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 6/151 (3%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYE--YVCNGSLDQHLSKHTRTPLSWEKRMKI 78
E+ ++ H+N++ LL + K L ++ Y+ +D +L + + L E+ +
Sbjct: 67 ELVLMKCVNHKNIISLLNVFT-PQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL 125
Query: 79 ALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
G+++LH IIHRD+ P+NI+V D + DFGLA+T T V T
Sbjct: 126 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVT 182
Query: 139 LGYLAPEYVECGKLSTKTDVYSFGVVLLQLI 169
Y APE + D++S G ++ +++
Sbjct: 183 RYYRAPEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 6/128 (4%)
Query: 47 LLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILV 106
L+V E + G L + + + +I + +QYLH NI HRD+ P N+L
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLY 150
Query: 107 THDFEPM---LGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGV 163
T L DFG AK E + +++ T T Y+APE + K D++S GV
Sbjct: 151 TSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGV 207
Query: 164 VLLQLITG 171
++ L+ G
Sbjct: 208 IMYILLCG 215
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 6/151 (3%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYE--YVCNGSLDQHLSKHTRTPLSWEKRMKI 78
E+ ++ H+N++ LL + K L ++ Y+ +D +L + + L E+ +
Sbjct: 66 ELVLMKCVNHKNIISLLNVFT-PQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL 124
Query: 79 ALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
G+++LH IIHRD+ P+NI+V D + DFGLA+T T V T
Sbjct: 125 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVT 181
Query: 139 LGYLAPEYVECGKLSTKTDVYSFGVVLLQLI 169
Y APE + D++S G ++ +++
Sbjct: 182 RYYRAPEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 6/128 (4%)
Query: 47 LLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILV 106
L+V E + G L + + + +I + +QYLH NI HRD+ P N+L
Sbjct: 141 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLY 200
Query: 107 THDFEPM---LGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGV 163
T L DFG AK E + +++ T T Y+APE + K D++S GV
Sbjct: 201 TSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGV 257
Query: 164 VLLQLITG 171
++ L+ G
Sbjct: 258 IMYILLCG 265
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 6/151 (3%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYE--YVCNGSLDQHLSKHTRTPLSWEKRMKI 78
E+ ++ H+N++ LL + K L ++ Y+ +D +L + + L E+ +
Sbjct: 74 ELVLMKCVNHKNIISLLNVFT-PQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL 132
Query: 79 ALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
G+++LH IIHRD+ P+NI+V D + DFGLA+T T V T
Sbjct: 133 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVT 189
Query: 139 LGYLAPEYVECGKLSTKTDVYSFGVVLLQLI 169
Y APE + D++S G ++ +++
Sbjct: 190 RYYRAPEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 6/128 (4%)
Query: 47 LLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILV 106
L+V E + G L + + + +I + +QYLH NI HRD+ P N+L
Sbjct: 90 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLY 149
Query: 107 THDFEPM---LGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGV 163
T L DFG AK E + +++ T T Y+APE + K D++S GV
Sbjct: 150 TSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGV 206
Query: 164 VLLQLITG 171
++ L+ G
Sbjct: 207 IMYILLCG 214
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 61/129 (47%), Gaps = 8/129 (6%)
Query: 47 LLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILV 106
L+V E + G L + + + +I + +QYLH NI HRD+ P N+L
Sbjct: 97 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLY 156
Query: 107 THDFEP----MLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFG 162
T P L DFG AK E + +++ T T Y+APE + K D++S G
Sbjct: 157 TSK-RPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLG 212
Query: 163 VVLLQLITG 171
V++ L+ G
Sbjct: 213 VIMYILLCG 221
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 6/128 (4%)
Query: 47 LLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILV 106
L+V E + G L + + + +I + +QYLH NI HRD+ P N+L
Sbjct: 105 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLY 164
Query: 107 THDFEPM---LGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGV 163
T L DFG AK E + +++ T T Y+APE + K D++S GV
Sbjct: 165 TSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGV 221
Query: 164 VLLQLITG 171
++ L+ G
Sbjct: 222 IMYILLCG 229
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 82/181 (45%), Gaps = 12/181 (6%)
Query: 2 IAVKQHK-DASSQGD-REFKSEVQVLSKARHENVVMLLGSC--SDGNKRL----LVYEYV 53
+AVK K D + D EF E + + H +V L+G S RL ++ ++
Sbjct: 54 VAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFM 113
Query: 54 CNGSLDQHL--SKHTRTP--LSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHD 109
+G L L S+ P L + ++ + A G++YL N IHRD+ N ++ D
Sbjct: 114 KHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAED 173
Query: 110 FEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLI 169
+ DFGL++ Y + +LA E + + +DV++FGV + +++
Sbjct: 174 MTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIM 233
Query: 170 T 170
T
Sbjct: 234 T 234
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 6/128 (4%)
Query: 47 LLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILV 106
L+V E + G L + + + +I + +QYLH NI HRD+ P N+L
Sbjct: 89 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLY 148
Query: 107 THDFEPM---LGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGV 163
T L DFG AK E + +++ T T Y+APE + K D++S GV
Sbjct: 149 TSKRPNAILKLTDFGFAK---ETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGV 205
Query: 164 VLLQLITG 171
++ L+ G
Sbjct: 206 IMYILLCG 213
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR--TPLSWEKRMK 77
+E ++L +V L S D + +V EY G + HL + R P + +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
I L +YLH ++I+RD+ P N+++ + DFGLAK + + G
Sbjct: 150 IVLT----FEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVK-----GRTWXLCG 200
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T YLAPE + + D ++ GV++ ++ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 74/166 (44%), Gaps = 18/166 (10%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKR--LLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKI 78
E +VL K H+N+V L + R +L+ E+ GSL L + + E I
Sbjct: 57 EFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLI 116
Query: 79 AL-GAAKGLQYLHENNIIHRDMGPNNIL--VTHDFEPM--LGDFGLAKTQREDSDYSTET 133
L G+ +L EN I+HR++ P NI+ + D + + L DFG A+ +D + +
Sbjct: 117 VLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVS-- 174
Query: 134 GVVGTLGYLAPEYVECG--------KLSTKTDVYSFGVVLLQLITG 171
+ GT YL P+ E K D++S GV TG
Sbjct: 175 -LYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 24/190 (12%)
Query: 3 AVKQHKDASSQGDREFKSEVQVLSK-ARHENVVMLLGSCS-------DGNKRLLVYEYVC 54
A+K+ + +R EV + K + H N+V + S G L+ +C
Sbjct: 57 ALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELC 116
Query: 55 NGSLDQHLSK-HTRTPLSWEKRMKIALGAAKGLQYLHENN--IIHRDMGPNNILVTHDFE 111
G L + L K +R PLS + +KI + +Q++H IIHRD+ N+L+++
Sbjct: 117 KGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGT 176
Query: 112 PMLGDFGLAKTQREDSDYS----------TETGVVGTLGYLAPEYVECGK---LSTKTDV 158
L DFG A T DYS E T Y PE ++ + K D+
Sbjct: 177 IKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDI 236
Query: 159 YSFGVVLLQL 168
++ G +L L
Sbjct: 237 WALGCILYLL 246
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 6/151 (3%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYE--YVCNGSLDQHLSKHTRTPLSWEKRMKI 78
E+ ++ H+N++ LL + K L ++ Y+ +D +L + + L E+ +
Sbjct: 111 ELVLMKCVNHKNIISLLNVFT-PQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL 169
Query: 79 ALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
G+++LH IIHRD+ P+NI+V D + DFGLA+T T V T
Sbjct: 170 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYVVT 226
Query: 139 LGYLAPEYVECGKLSTKTDVYSFGVVLLQLI 169
Y APE + D++S G ++ +++
Sbjct: 227 RYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 6/151 (3%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYE--YVCNGSLDQHLSKHTRTPLSWEKRMKI 78
E+ ++ H+N++ LL + K L ++ Y+ +D +L + + L E+ +
Sbjct: 111 ELVLMKCVNHKNIISLLNVFT-PQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL 169
Query: 79 ALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
G+++LH IIHRD+ P+NI+V D + DFGLA+T T V T
Sbjct: 170 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYVVT 226
Query: 139 LGYLAPEYVECGKLSTKTDVYSFGVVLLQLI 169
Y APE + D++S G ++ +++
Sbjct: 227 RYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR--TPLSWEKRMK 77
+E ++L +V L S D + +V EY G + HL + R P + +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
I L +YLH ++I+RD+ P N+++ + DFGLAK + + G
Sbjct: 150 IVLT----FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVK-----GRTWXLCG 200
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T YLAPE + + D ++ GV++ ++ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 6/151 (3%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYE--YVCNGSLDQHLSKHTRTPLSWEKRMKI 78
E+ ++ H+N++ LL + K L ++ Y+ +D +L + + L E+ +
Sbjct: 78 ELVLMKCVNHKNIIGLLNVFTP-QKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL 136
Query: 79 ALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
G+++LH IIHRD+ P+NI+V D + DFGLA+T T V T
Sbjct: 137 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVT 193
Query: 139 LGYLAPEYVECGKLSTKTDVYSFGVVLLQLI 169
Y APE + D++S G ++ +++
Sbjct: 194 RYYRAPEVILGMGYKENVDLWSVGCIMGEMV 224
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 6/151 (3%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYE--YVCNGSLDQHLSKHTRTPLSWEKRMKI 78
E+ ++ H+N++ LL + K L ++ Y+ +D +L + + L E+ +
Sbjct: 67 ELVLMKCVNHKNIIGLLNVFT-PQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL 125
Query: 79 ALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGT 138
G+++LH IIHRD+ P+NI+V D + DFGLA+T T V T
Sbjct: 126 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVT 182
Query: 139 LGYLAPEYVECGKLSTKTDVYSFGVVLLQLI 169
Y APE + D++S G ++ +++
Sbjct: 183 RYYRAPEVILGMGYKENVDLWSVGCIMGEMV 213
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 71/144 (49%), Gaps = 8/144 (5%)
Query: 33 VVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIALGAA-KGLQYLHE 91
+V L G+ +G + E + GSL Q + + P E R LG A +GL+YLH
Sbjct: 147 IVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLP---EDRALYYLGQALEGLEYLHS 203
Query: 92 NNIIHRDMGPNNILVTHD-FEPMLGDFGLAKTQREDS-DYSTETG--VVGTLGYLAPEYV 147
I+H D+ +N+L++ D L DFG A + D S TG + GT ++APE V
Sbjct: 204 RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVV 263
Query: 148 ECGKLSTKTDVYSFGVVLLQLITG 171
K DV+S ++L ++ G
Sbjct: 264 LGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 73/166 (43%), Gaps = 18/166 (10%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKR--LLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKI 78
E +VL K H+N+V L + R +L+ E+ GSL L + + E I
Sbjct: 57 EFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLI 116
Query: 79 AL-GAAKGLQYLHENNIIHRDMGPNNIL--VTHDFEPM--LGDFGLAKTQREDSDYSTET 133
L G+ +L EN I+HR++ P NI+ + D + + L DFG A+ +D +
Sbjct: 117 VLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQF---V 173
Query: 134 GVVGTLGYLAPEYVECG--------KLSTKTDVYSFGVVLLQLITG 171
+ GT YL P+ E K D++S GV TG
Sbjct: 174 XLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 106/255 (41%), Gaps = 37/255 (14%)
Query: 1 MIAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSD--GNKRLLVYEYVCNGSL 58
++ V + +D S++ R+F E L H NV+ +LG+C L+ + GSL
Sbjct: 37 VVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWXPYGSL 96
Query: 59 DQHLSKHTRTPLSWEKRMKIALGAAKGLQYLH--ENNIIHRDMGPNNILVTHDFEPMLGD 116
L + T + + +K AL A+G +LH E I + ++ + D
Sbjct: 97 YNVLHEGTNFVVDQSQAVKFALDXARGXAFLHTLEPLIPRHALNSRSVXIDED------- 149
Query: 117 FGLAKTQREDSDYSTET-GVVGTLGYLAPEYVECGKLSTK---TDVYSFGVVLLQLITG- 171
A+ D +S ++ G ++APE ++ T D +SF V+L +L+T
Sbjct: 150 -XTARISXADVKFSFQSPGRXYAPAWVAPEALQKKPEDTNRRSADXWSFAVLLWELVTRE 208
Query: 172 ---LKTNDKTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKD 228
++ +G K + RP + P I P + ++ K C ++D
Sbjct: 209 VPFADLSNXEIGXKVALEGLRPTI-----PPGISPHV------------SKLXKICXNED 251
Query: 229 PQKRLPMDTVVDALK 243
P KR D +V L+
Sbjct: 252 PAKRPKFDXIVPILE 266
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 83/179 (46%), Gaps = 13/179 (7%)
Query: 1 MIAVKQ-HKDASSQGDREFKSEVQVLSKARH-ENVVMLLGSCSDGNKRLLVYEYVCNGSL 58
+IAVKQ + + + ++ ++ V+ K+ +V G+ + E + G+
Sbjct: 52 VIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM--GTC 109
Query: 59 DQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHE-NNIIHRDMGPNNILVTHDFEPMLGDF 117
+ L K + P+ K+ + K L YL E + +IHRD+ P+NIL+ + L DF
Sbjct: 110 AEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDF 169
Query: 118 GLAKTQREDSDYSTETGVVGTLGYLAPEYVE-----CGKLSTKTDVYSFGVVLLQLITG 171
G++ +D G Y+APE ++ + DV+S G+ L++L TG
Sbjct: 170 GISGRLVDDKAKDRSAGCA---AYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATG 225
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 82/178 (46%), Gaps = 17/178 (9%)
Query: 8 KDASSQGDREFKSEVQVLSKAR-HENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHT 66
K A R F+ EV+ L + + ++N++ L+ D + LV+E + GS+ H+ K
Sbjct: 48 KQAGHSRSRVFR-EVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQK 106
Query: 67 RTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVT--HDFEPM-LGDFGLAKTQ 123
+ + ++ A L +LH I HRD+ P NIL P+ + DF L
Sbjct: 107 H--FNEREASRVVRDVAAALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGM 164
Query: 124 REDSDYS-----TETGVVGTLGYLAPEYVECGK-----LSTKTDVYSFGVVLLQLITG 171
+ ++ + T G+ Y+APE VE + D++S GVVL +++G
Sbjct: 165 KLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 69/154 (44%), Gaps = 11/154 (7%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR--TPLSWEKRMK 77
+E ++L +V L S D + +V EYV G + HL + R P + +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
I L +YLH ++I+RD+ P N+L+ + DFG AK + + G
Sbjct: 150 IVLT----FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCG 200
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T LAPE + + D ++ GV++ ++ G
Sbjct: 201 TPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 78/156 (50%), Gaps = 6/156 (3%)
Query: 19 KSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKI 78
K E+ +L+ ARH N++ L S + ++++E++ + + ++ + L+ + +
Sbjct: 49 KKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINT-SAFELNEREIVSY 107
Query: 79 ALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLG--DFGLAKTQREDSDYSTETGVV 136
+ LQ+LH +NI H D+ P NI+ + +FG A+ + ++ +
Sbjct: 108 VHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRL---LF 164
Query: 137 GTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGL 172
Y APE + +ST TD++S G ++ L++G+
Sbjct: 165 TAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGI 200
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 11/154 (7%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR--TPLSWEKRMK 77
+E ++L +V L S D + +V EY G + HL + R P + +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
I L +YLH ++I+RD+ P N+++ + DFG AK + + G
Sbjct: 150 IVLT----FEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVK-----GRTWXLCG 200
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T YLAPE + + D ++ GV++ ++ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 73/161 (45%), Gaps = 11/161 (6%)
Query: 18 FKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSK-HTRTPLSWEKRM 76
F+ E VL + + L + D N LV +Y G L LSK + P E
Sbjct: 121 FREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLP---EDMA 177
Query: 77 KIALGA-AKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGV 135
+ +G + +H+ + +HRD+ P+N+L+ + L DFG +D +
Sbjct: 178 RFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVA- 236
Query: 136 VGTLGYLAPEYVEC-----GKLSTKTDVYSFGVVLLQLITG 171
VGT Y++PE ++ GK + D +S GV + +++ G
Sbjct: 237 VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYG 277
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 58/128 (45%), Gaps = 6/128 (4%)
Query: 47 LLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILV 106
L+V E + G L + + + +I + +QYLH NI HRD+ P N+L
Sbjct: 135 LIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAHRDVKPENLLY 194
Query: 107 THDFEPM---LGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGV 163
T L DFG AK E + +++ T T Y+APE + K D +S GV
Sbjct: 195 TSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGV 251
Query: 164 VLLQLITG 171
+ L+ G
Sbjct: 252 IXYILLCG 259
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 11/154 (7%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR--TPLSWEKRMK 77
+E ++L +V L S D + +V EY G + HL + R P + +
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ 150
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
I L +YLH ++I+RD+ P N+++ + DFG AK + + G
Sbjct: 151 IVLT----FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-----GRTWXLCG 201
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T YLAPE + + D ++ GV++ ++ G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 64/141 (45%), Gaps = 11/141 (7%)
Query: 33 VVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR--TPLSWEKRMKIALGAAKGLQYLH 90
+V L S D + +V EY G + HL + R P + +I L +YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH 159
Query: 91 ENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECG 150
++I+RD+ P N+L+ + DFG AK + + GT YLAPE +
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK-----GRTWXLCGTPEYLAPEIILSK 214
Query: 151 KLSTKTDVYSFGVVLLQLITG 171
+ D ++ GV++ ++ G
Sbjct: 215 GYNKAVDWWALGVLIYEMAAG 235
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 11/154 (7%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR--TPLSWEKRMK 77
+E ++L +V L S D + +V EY G + HL + R P + +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
I L +YLH ++I+RD+ P N+++ + DFG AK + + G
Sbjct: 150 IVLT----FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-----GRTWXLCG 200
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T YLAPE + + D ++ GV++ ++ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 73/161 (45%), Gaps = 11/161 (6%)
Query: 18 FKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSK-HTRTPLSWEKRM 76
F+ E VL + + L + D N LV +Y G L LSK + P E
Sbjct: 137 FREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLP---EDMA 193
Query: 77 KIALGA-AKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGV 135
+ +G + +H+ + +HRD+ P+N+L+ + L DFG +D +
Sbjct: 194 RFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVA- 252
Query: 136 VGTLGYLAPEYVEC-----GKLSTKTDVYSFGVVLLQLITG 171
VGT Y++PE ++ GK + D +S GV + +++ G
Sbjct: 253 VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYG 293
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 11/154 (7%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR--TPLSWEKRMK 77
+E ++L +V L S D + +V EY G + HL + R P + +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQ 149
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
I L +YLH ++I+RD+ P N+++ + DFG AK + + G
Sbjct: 150 IVLT----FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-----GRTWXLCG 200
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T YLAPE + + D ++ GV++ ++ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 61/129 (47%), Gaps = 7/129 (5%)
Query: 47 LLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILV 106
L++ E + G L + + + + +I +Q+LH +NI HRD+ P N+L
Sbjct: 83 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLY 142
Query: 107 T---HDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGV 163
T D L DFG AK E + + +T T Y+APE + K D++S GV
Sbjct: 143 TSKEKDAVLKLTDFGFAK---ETTQNALQTPCY-TPYYVAPEVLGPEKYDKSCDMWSLGV 198
Query: 164 VLLQLITGL 172
++ L+ G
Sbjct: 199 IMYILLCGF 207
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 71/144 (49%), Gaps = 8/144 (5%)
Query: 33 VVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIALGAA-KGLQYLHE 91
+V L G+ +G + E + GSL Q + + P E R LG A +GL+YLH
Sbjct: 128 IVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLP---EDRALYYLGQALEGLEYLHT 184
Query: 92 NNIIHRDMGPNNILVTHD-FEPMLGDFGLAKTQREDS-DYSTETG--VVGTLGYLAPEYV 147
I+H D+ +N+L++ D L DFG A + D S TG + GT ++APE V
Sbjct: 185 RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVV 244
Query: 148 ECGKLSTKTDVYSFGVVLLQLITG 171
K D++S ++L ++ G
Sbjct: 245 MGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 61/129 (47%), Gaps = 7/129 (5%)
Query: 47 LLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILV 106
L++ E + G L + + + + +I +Q+LH +NI HRD+ P N+L
Sbjct: 102 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLY 161
Query: 107 T---HDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTKTDVYSFGV 163
T D L DFG AK E + + +T T Y+APE + K D++S GV
Sbjct: 162 TSKEKDAVLKLTDFGFAK---ETTQNALQTPCY-TPYYVAPEVLGPEKYDKSCDMWSLGV 217
Query: 164 VLLQLITGL 172
++ L+ G
Sbjct: 218 IMYILLCGF 226
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 71/144 (49%), Gaps = 8/144 (5%)
Query: 33 VVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIALGAA-KGLQYLHE 91
+V L G+ +G + E + GSL Q + + P E R LG A +GL+YLH
Sbjct: 112 IVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLP---EDRALYYLGQALEGLEYLHT 168
Query: 92 NNIIHRDMGPNNILVTHD-FEPMLGDFGLAKTQREDS-DYSTETG--VVGTLGYLAPEYV 147
I+H D+ +N+L++ D L DFG A + D S TG + GT ++APE V
Sbjct: 169 RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVV 228
Query: 148 ECGKLSTKTDVYSFGVVLLQLITG 171
K D++S ++L ++ G
Sbjct: 229 MGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 71/144 (49%), Gaps = 8/144 (5%)
Query: 33 VVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIALGAA-KGLQYLHE 91
+V L G+ +G + E + GSL Q + + P E R LG A +GL+YLH
Sbjct: 126 IVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLP---EDRALYYLGQALEGLEYLHT 182
Query: 92 NNIIHRDMGPNNILVTHD-FEPMLGDFGLAKTQREDS-DYSTETG--VVGTLGYLAPEYV 147
I+H D+ +N+L++ D L DFG A + D S TG + GT ++APE V
Sbjct: 183 RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVV 242
Query: 148 ECGKLSTKTDVYSFGVVLLQLITG 171
K D++S ++L ++ G
Sbjct: 243 MGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 74/156 (47%), Gaps = 10/156 (6%)
Query: 30 HENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIALGAAKGLQYL 89
H N+V L D LV E + G L + + K + S + I + ++
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKK--KKHFSETEASYIMRKLVSAVSHM 122
Query: 90 HENNIIHRDMGPNNILVTHD---FEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEY 146
H+ ++HRD+ P N+L T + E + DFG A+ + D+ +T TL Y APE
Sbjct: 123 HDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ-PLKTPCF-TLHYAAPEL 180
Query: 147 VECGKLSTKTDVYSFGVVLLQLITG---LKTNDKTL 179
+ D++S GV+L +++G +++D++L
Sbjct: 181 LNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSL 216
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 83/185 (44%), Gaps = 29/185 (15%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYE--YVCNGSLDQHLSKHTRTP--LSWEKRM 76
E+ +L++ + + ++ L + LL ++ Y+ D L K +TP L+ E
Sbjct: 75 EITILNRLKSDYIIRLYDLIIPDD--LLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIK 132
Query: 77 KIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTE---- 132
I G ++HE+ IIHRD+ P N L+ D + DFGLA+T + D +
Sbjct: 133 TILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLE 192
Query: 133 ----------------TGVVGTLGYLAPEYVECGKLSTKT-DVYSFGVVLLQLITGLKT- 174
T V T Y APE + + TK+ D++S G + +L+ L++
Sbjct: 193 ENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH 252
Query: 175 -NDKT 178
ND T
Sbjct: 253 INDPT 257
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 68/154 (44%), Gaps = 11/154 (7%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR--TPLSWEKRMK 77
+E ++L + L S D + +V EY G + HL + R P + +
Sbjct: 91 NEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ 150
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
I L +YLH ++I+RD+ P N+++ + DFG AK + + G
Sbjct: 151 IVLT----FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-----GRTWXLCG 201
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T YLAPE + + D ++ GV++ ++ G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 68/154 (44%), Gaps = 11/154 (7%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR--TPLSWEKRMK 77
+E ++L + L S D + +V EY G + HL + R P + +
Sbjct: 91 NEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQ 150
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
I L +YLH ++I+RD+ P N+++ + DFG AK + + G
Sbjct: 151 IVLT----FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-----GRTWXLCG 201
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T YLAPE + + D ++ GV++ ++ G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Query: 85 GLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAP 144
GL LHE ++HRD+ P NIL+ + + + DF LA RED+ + +T V Y AP
Sbjct: 146 GLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLA---REDTADANKTHYVTHRWYRAP 202
Query: 145 EYVECGKLSTK-TDVYSFGVVLLQLI 169
E V K TK D++S G V+ ++
Sbjct: 203 ELVMQFKGFTKLVDMWSAGCVMAEMF 228
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Query: 85 GLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAP 144
GL LHE ++HRD+ P NIL+ + + + DF LA RED+ + +T V Y AP
Sbjct: 146 GLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLA---REDTADANKTHYVTHRWYRAP 202
Query: 145 EYVECGKLSTK-TDVYSFGVVLLQLIT 170
E V K TK D++S G V+ ++
Sbjct: 203 ELVMQFKGFTKLVDMWSAGCVMAEMFN 229
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 68/154 (44%), Gaps = 11/154 (7%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTR--TPLSWEKRMK 77
+E ++L + L S D + +V EY G + HL + R P + +
Sbjct: 91 NEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ 150
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
I L +YLH ++I+RD+ P N+++ + DFG AK + + G
Sbjct: 151 IVLT----FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-----GRTWXLCG 201
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
T YLAPE + + D ++ GV++ ++ G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 85/170 (50%), Gaps = 19/170 (11%)
Query: 15 DREFKS-EVQVLSKARHENVVML-LGSCSDGNKRLLVY-----EYVCNG--SLDQHLSKH 65
D+ FK+ E+Q++ K H N+V L S G K+ +VY +YV + +H S+
Sbjct: 56 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRA 115
Query: 66 TRT-PLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPM-LGDFGLAKT- 122
+T P+ + K L + L Y+H I HRD+ P N+L+ D + L DFG AK
Sbjct: 116 KQTLPVIYVKLYMYQL--FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
Query: 123 QREDSDYSTETGVVGTLGYLAPEYV-ECGKLSTKTDVYSFGVVLLQLITG 171
R + + S + + Y APE + ++ DV+S G VL +L+ G
Sbjct: 174 VRGEPNVSX----ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 105/240 (43%), Gaps = 27/240 (11%)
Query: 8 KDASSQGDREFKSEVQVLSK-ARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHT 66
++A +Q +++E+ L+K +H + ++ L ++ + + N L+ L K
Sbjct: 63 EEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKK-K 121
Query: 67 RTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQRED 126
++ WE++ + + +H++ I+H D+ P N L+ D L DFG+A + D
Sbjct: 122 KSIDPWERK-SYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD 179
Query: 127 SDYSTETGVVGTLGYLAPEYVECGKLSTKT-----------DVYSFGVVLLQLITGLKTN 175
+ + VGT+ Y+ PE ++ S + DV+S G +L + G
Sbjct: 180 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 239
Query: 176 DKTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQKRLPM 235
+ + + + E +PD+ + + D + K CL +DP++R+ +
Sbjct: 240 QQIINQISKLHAIIDPNHEIEFPDIPEKDLQD------------VLKCCLKRDPKQRISI 287
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 104/240 (43%), Gaps = 27/240 (11%)
Query: 8 KDASSQGDREFKSEVQVLSK-ARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHT 66
++A +Q +++E+ L+K +H + ++ L ++ + + N L+ L K
Sbjct: 47 EEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKK-K 105
Query: 67 RTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQRED 126
++ WE R + + +H++ I+H D+ P N L+ D L DFG+A + D
Sbjct: 106 KSIDPWE-RKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD 163
Query: 127 SDYSTETGVVGTLGYLAPEYVECGKLSTKT-----------DVYSFGVVLLQLITGLKTN 175
+ + VGT+ Y+ PE ++ S + DV+S G +L + G
Sbjct: 164 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 223
Query: 176 DKTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQKRLPM 235
+ + + + E +PD+ + + D + K CL +DP++R+ +
Sbjct: 224 QQIINQISKLHAIIDPNHEIEFPDIPEKDLQD------------VLKCCLKRDPKQRISI 271
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/240 (20%), Positives = 105/240 (43%), Gaps = 27/240 (11%)
Query: 8 KDASSQGDREFKSEVQVLSK-ARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHT 66
++A +Q +++E+ L+K +H + ++ L ++ + + N L+ L K
Sbjct: 43 EEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKK-K 101
Query: 67 RTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQRED 126
++ WE++ + + +H++ I+H D+ P N L+ ++ DFG+A + D
Sbjct: 102 KSIDPWERK-SYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPD 159
Query: 127 SDYSTETGVVGTLGYLAPEYVECGKLSTKT-----------DVYSFGVVLLQLITGLKTN 175
+ + VGT+ Y+ PE ++ S + DV+S G +L + G
Sbjct: 160 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 219
Query: 176 DKTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQKRLPM 235
+ + + + E +PD+ + + D + K CL +DP++R+ +
Sbjct: 220 QQIINQISKLHAIIDPNHEIEFPDIPEKDLQD------------VLKCCLKRDPKQRISI 267
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 26/150 (17%)
Query: 52 YVCNGSLDQHLSKHTRTPLSW-EKRMKIAL-GAAKGLQYLHENNIIHRDMGPNNILVTHD 109
Y+ D L K +TP+ E+ +K L G +++HE+ IIHRD+ P N L+ D
Sbjct: 108 YIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKFIHESGIIHRDLKPANCLLNQD 167
Query: 110 FEPMLGDFGLAKTQREDSDYSTE-----------------------TGVVGTLGYLAPEY 146
+ DFGLA+T D D T V T Y APE
Sbjct: 168 CSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPEL 227
Query: 147 VECGKLSTKT-DVYSFGVVLLQLITGLKTN 175
+ + T + D++S G + +L+ +K++
Sbjct: 228 ILLQENYTNSIDIWSTGCIFAELLNMMKSH 257
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 104/240 (43%), Gaps = 27/240 (11%)
Query: 8 KDASSQGDREFKSEVQVLSK-ARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHT 66
++A +Q +++E+ L+K +H + ++ L ++ + + N L+ L K
Sbjct: 91 EEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKK-K 149
Query: 67 RTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQRED 126
++ WE R + + +H++ I+H D+ P N L+ D L DFG+A + D
Sbjct: 150 KSIDPWE-RKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD 207
Query: 127 SDYSTETGVVGTLGYLAPEYVECGKLSTKT-----------DVYSFGVVLLQLITGLKTN 175
+ + VGT+ Y+ PE ++ S + DV+S G +L + G
Sbjct: 208 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 267
Query: 176 DKTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQKRLPM 235
+ + + + E +PD+ + + D + K CL +DP++R+ +
Sbjct: 268 QQIINQISKLHAIIDPNHEIEFPDIPEKDLQD------------VLKCCLKRDPKQRISI 315
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 85 GLQYLHENNIIHRDMGPNNILVTHD--FEPMLGDFGLAKT--QREDSDYSTETGVVGTLG 140
L YLH I HRD+ P N L + + FE L DFGL+K + + +Y T GT
Sbjct: 180 ALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPY 239
Query: 141 YLAPEYVECGKLST--KTDVYSFGVVLLQLITG 171
++APE + S K D +S GV+L L+ G
Sbjct: 240 FVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMG 272
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 104/240 (43%), Gaps = 27/240 (11%)
Query: 8 KDASSQGDREFKSEVQVLSK-ARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHT 66
++A +Q +++E+ L+K +H + ++ L ++ + + N L+ L K
Sbjct: 63 EEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKK-K 121
Query: 67 RTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQRED 126
++ WE++ + + +H++ I+H D+ P N L+ D L DFG+A + D
Sbjct: 122 KSIDPWERK-SYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD 179
Query: 127 SDYSTETGVVGTLGYLAPEYVECGKLSTKT-----------DVYSFGVVLLQLITGLKTN 175
+ VGT+ Y+ PE ++ S + DV+S G +L + G
Sbjct: 180 XXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 239
Query: 176 DKTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQKRLPM 235
+ + + + E +PD+ + + D + K CL +DP++R+ +
Sbjct: 240 QQIINQISKLHAIIDPNHEIEFPDIPEKDLQD------------VLKCCLKRDPKQRISI 287
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 68/151 (45%), Gaps = 7/151 (4%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNG-SLDQHLSKHTRTPLSWEKRMKIA 79
E+ +LS+ H N++ +L + LV E +G L + +H R +
Sbjct: 79 EIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQ 138
Query: 80 LGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTL 139
L +A G YL +IIHRD+ NI++ DF L DFG A + T GT+
Sbjct: 139 LVSAVG--YLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYT---FCGTI 193
Query: 140 GYLAPEYVECGKL-STKTDVYSFGVVLLQLI 169
Y APE + + +++S GV L L+
Sbjct: 194 EYCAPEVLMGNPYRGPELEMWSLGVTLYTLV 224
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 104/240 (43%), Gaps = 27/240 (11%)
Query: 8 KDASSQGDREFKSEVQVLSK-ARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHT 66
++A +Q +++E+ L+K +H + ++ L ++ + + N L+ L K
Sbjct: 44 EEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKK-K 102
Query: 67 RTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQRED 126
++ WE R + + +H++ I+H D+ P N L+ D L DFG+A + D
Sbjct: 103 KSIDPWE-RKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD 160
Query: 127 SDYSTETGVVGTLGYLAPEYVECGKLSTKT-----------DVYSFGVVLLQLITGLKTN 175
+ + VGT+ Y+ PE ++ S + DV+S G +L + G
Sbjct: 161 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 220
Query: 176 DKTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQKRLPM 235
+ + + + E +PD+ + + D + K CL +DP++R+ +
Sbjct: 221 QQIINQISKLHAIIDPNHEIEFPDIPEKDLQD------------VLKCCLKRDPKQRISI 268
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 84/170 (49%), Gaps = 19/170 (11%)
Query: 15 DREFKS-EVQVLSKARHENVVML-LGSCSDGNKRLLVY-----EYVCNG--SLDQHLSKH 65
D+ FK+ E+Q++ K H N+V L S G K+ VY +YV + +H S+
Sbjct: 68 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 127
Query: 66 TRT-PLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPM-LGDFGLAKT- 122
+T P+ + K L + L Y+H I HRD+ P N+L+ D + L DFG AK
Sbjct: 128 KQTLPVIYVKLYMYQL--FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 185
Query: 123 QREDSDYSTETGVVGTLGYLAPEYV-ECGKLSTKTDVYSFGVVLLQLITG 171
R + + S + + Y APE + ++ DV+S G VL +L+ G
Sbjct: 186 VRGEPNVSX----ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 231
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 84/170 (49%), Gaps = 19/170 (11%)
Query: 15 DREFKS-EVQVLSKARHENVVML-LGSCSDGNKRLLVY-----EYVCNG--SLDQHLSKH 65
D+ FK+ E+Q++ K H N+V L S G K+ VY +YV + +H S+
Sbjct: 64 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 123
Query: 66 TRT-PLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPM-LGDFGLAKT- 122
+T P+ + K L + L Y+H I HRD+ P N+L+ D + L DFG AK
Sbjct: 124 KQTLPVIYVKLYMYQL--FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 181
Query: 123 QREDSDYSTETGVVGTLGYLAPEYV-ECGKLSTKTDVYSFGVVLLQLITG 171
R + + S + + Y APE + ++ DV+S G VL +L+ G
Sbjct: 182 VRGEPNVSX----ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 227
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 84/170 (49%), Gaps = 19/170 (11%)
Query: 15 DREFKS-EVQVLSKARHENVVML-LGSCSDGNKRLLVY-----EYVCNG--SLDQHLSKH 65
D+ FK+ E+Q++ K H N+V L S G K+ VY +YV + +H S+
Sbjct: 68 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 127
Query: 66 TRT-PLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPM-LGDFGLAKT- 122
+T P+ + K L + L Y+H I HRD+ P N+L+ D + L DFG AK
Sbjct: 128 KQTLPVIYVKLYMYQL--FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 185
Query: 123 QREDSDYSTETGVVGTLGYLAPEYV-ECGKLSTKTDVYSFGVVLLQLITG 171
R + + S + + Y APE + ++ DV+S G VL +L+ G
Sbjct: 186 VRGEPNVSX----ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 231
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 84/170 (49%), Gaps = 19/170 (11%)
Query: 15 DREFKS-EVQVLSKARHENVVML-LGSCSDGNKRLLVY-----EYVCNG--SLDQHLSKH 65
D+ FK+ E+Q++ K H N+V L S G K+ VY +YV + +H S+
Sbjct: 56 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 115
Query: 66 TRT-PLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPM-LGDFGLAKT- 122
+T P+ + K L + L Y+H I HRD+ P N+L+ D + L DFG AK
Sbjct: 116 KQTLPVIYVKLYMYQL--FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
Query: 123 QREDSDYSTETGVVGTLGYLAPEYV-ECGKLSTKTDVYSFGVVLLQLITG 171
R + + S + + Y APE + ++ DV+S G VL +L+ G
Sbjct: 174 VRGEPNVSX----ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 84/170 (49%), Gaps = 19/170 (11%)
Query: 15 DREFKS-EVQVLSKARHENVVML-LGSCSDGNKRLLVY-----EYVCNG--SLDQHLSKH 65
D+ FK+ E+Q++ K H N+V L S G K+ VY +YV + +H S+
Sbjct: 75 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 134
Query: 66 TRT-PLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPM-LGDFGLAKT- 122
+T P+ + K L + L Y+H I HRD+ P N+L+ D + L DFG AK
Sbjct: 135 KQTLPVIYVKLYMYQL--FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 192
Query: 123 QREDSDYSTETGVVGTLGYLAPEYV-ECGKLSTKTDVYSFGVVLLQLITG 171
R + + S + + Y APE + ++ DV+S G VL +L+ G
Sbjct: 193 VRGEPNVSX----ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 238
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 84/170 (49%), Gaps = 19/170 (11%)
Query: 15 DREFKS-EVQVLSKARHENVVML-LGSCSDGNKRLLVY-----EYVCNG--SLDQHLSKH 65
D+ FK+ E+Q++ K H N+V L S G K+ VY +YV + +H S+
Sbjct: 56 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 115
Query: 66 TRT-PLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPM-LGDFGLAKT- 122
+T P+ + K L + L Y+H I HRD+ P N+L+ D + L DFG AK
Sbjct: 116 KQTLPVIYVKLYMYQL--FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
Query: 123 QREDSDYSTETGVVGTLGYLAPEYV-ECGKLSTKTDVYSFGVVLLQLITG 171
R + + S + + Y APE + ++ DV+S G VL +L+ G
Sbjct: 174 VRGEPNVSX----ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 84/170 (49%), Gaps = 19/170 (11%)
Query: 15 DREFKS-EVQVLSKARHENVVML-LGSCSDGNKRLLVY-----EYVCNG--SLDQHLSKH 65
D+ FK+ E+Q++ K H N+V L S G K+ VY +YV + +H S+
Sbjct: 90 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 149
Query: 66 TRT-PLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPM-LGDFGLAKT- 122
+T P+ + K L + L Y+H I HRD+ P N+L+ D + L DFG AK
Sbjct: 150 KQTLPVIYVKLYMYQL--FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 207
Query: 123 QREDSDYSTETGVVGTLGYLAPEYV-ECGKLSTKTDVYSFGVVLLQLITG 171
R + + S + + Y APE + ++ DV+S G VL +L+ G
Sbjct: 208 VRGEPNVSX----ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 253
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 29/163 (17%)
Query: 29 RHENVVMLLGSCSDGN----KRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIALGAAK 84
RHEN++ + + G + L+ +Y NGSL +L T L + +K+A +
Sbjct: 89 RHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKS---TTLDAKSMLKLAYSSVS 145
Query: 85 GLQYLHEN--------NIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGV- 135
GL +LH I HRD+ NILV + + D GLA D++ E +
Sbjct: 146 GLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTN---EVDIP 202
Query: 136 ----VGTLGYLAPEYVECG------KLSTKTDVYSFGVVLLQL 168
VGT Y+ PE ++ + D+YSFG++L ++
Sbjct: 203 PNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 84/170 (49%), Gaps = 19/170 (11%)
Query: 15 DREFKS-EVQVLSKARHENVVML-LGSCSDGNKRLLVY-----EYVCNG--SLDQHLSKH 65
D+ FK+ E+Q++ K H N+V L S G K+ VY +YV + +H S+
Sbjct: 57 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 116
Query: 66 TRT-PLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPM-LGDFGLAKT- 122
+T P+ + K L + L Y+H I HRD+ P N+L+ D + L DFG AK
Sbjct: 117 KQTLPVIYVKLYMYQL--FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 174
Query: 123 QREDSDYSTETGVVGTLGYLAPEYV-ECGKLSTKTDVYSFGVVLLQLITG 171
R + + S + + Y APE + ++ DV+S G VL +L+ G
Sbjct: 175 VRGEPNVSX----ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 220
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 84/170 (49%), Gaps = 19/170 (11%)
Query: 15 DREFKS-EVQVLSKARHENVVML-LGSCSDGNKRLLVY-----EYVCNG--SLDQHLSKH 65
D+ FK+ E+Q++ K H N+V L S G K+ VY +YV + +H S+
Sbjct: 90 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 149
Query: 66 TRT-PLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPM-LGDFGLAKT- 122
+T P+ + K L + L Y+H I HRD+ P N+L+ D + L DFG AK
Sbjct: 150 KQTLPVIYVKLYMYQL--FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 207
Query: 123 QREDSDYSTETGVVGTLGYLAPEYV-ECGKLSTKTDVYSFGVVLLQLITG 171
R + + S + + Y APE + ++ DV+S G VL +L+ G
Sbjct: 208 VRGEPNVS----YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 253
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 84/170 (49%), Gaps = 19/170 (11%)
Query: 15 DREFKS-EVQVLSKARHENVVML-LGSCSDGNKRLLVY-----EYVCNG--SLDQHLSKH 65
D+ FK+ E+Q++ K H N+V L S G K+ VY +YV + +H S+
Sbjct: 60 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 119
Query: 66 TRT-PLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPM-LGDFGLAKT- 122
+T P+ + K L + L Y+H I HRD+ P N+L+ D + L DFG AK
Sbjct: 120 KQTLPVIYVKLYMYQL--FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 177
Query: 123 QREDSDYSTETGVVGTLGYLAPEYV-ECGKLSTKTDVYSFGVVLLQLITG 171
R + + S + + Y APE + ++ DV+S G VL +L+ G
Sbjct: 178 VRGEPNVSX----ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 223
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 84/170 (49%), Gaps = 19/170 (11%)
Query: 15 DREFKS-EVQVLSKARHENVVML-LGSCSDGNKRLLVY-----EYVCNG--SLDQHLSKH 65
D+ FK+ E+Q++ K H N+V L S G K+ VY +YV + +H S+
Sbjct: 69 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 128
Query: 66 TRT-PLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPM-LGDFGLAKT- 122
+T P+ + K L + L Y+H I HRD+ P N+L+ D + L DFG AK
Sbjct: 129 KQTLPVIYVKLYMYQL--FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 186
Query: 123 QREDSDYSTETGVVGTLGYLAPEYV-ECGKLSTKTDVYSFGVVLLQLITG 171
R + + S + + Y APE + ++ DV+S G VL +L+ G
Sbjct: 187 VRGEPNVS----YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 232
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 84/170 (49%), Gaps = 19/170 (11%)
Query: 15 DREFKS-EVQVLSKARHENVVML-LGSCSDGNKRLLVY-----EYVCNG--SLDQHLSKH 65
D+ FK+ E+Q++ K H N+V L S G K+ VY +YV + +H S+
Sbjct: 92 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 151
Query: 66 TRT-PLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPM-LGDFGLAKT- 122
+T P+ + K L + L Y+H I HRD+ P N+L+ D + L DFG AK
Sbjct: 152 KQTLPVIYVKLYMYQL--FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 209
Query: 123 QREDSDYSTETGVVGTLGYLAPEYV-ECGKLSTKTDVYSFGVVLLQLITG 171
R + + S + + Y APE + ++ DV+S G VL +L+ G
Sbjct: 210 VRGEPNVS----YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 255
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 66/128 (51%), Gaps = 14/128 (10%)
Query: 52 YVCNGSLDQHLSKHTRTPLSWEKRM------KIALGAAKGLQYLHEN-NIIHRDMGPNNI 104
++C +D L K + + + + KIA+ K L++LH ++IHRD+ P+N+
Sbjct: 82 WICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNV 141
Query: 105 LVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYV--ECGK--LSTKTDVYS 160
L+ + + DFG++ +D + G Y+APE + E + S K+D++S
Sbjct: 142 LINALGQVKMCDFGISGYLVDDVAKDIDA---GCKPYMAPERINPELNQKGYSVKSDIWS 198
Query: 161 FGVVLLQL 168
G+ +++L
Sbjct: 199 LGITMIEL 206
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 84/170 (49%), Gaps = 19/170 (11%)
Query: 15 DREFKS-EVQVLSKARHENVVML-LGSCSDGNKRLLVY-----EYVCNG--SLDQHLSKH 65
D+ FK+ E+Q++ K H N+V L S G K+ VY +YV + +H S+
Sbjct: 56 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 115
Query: 66 TRT-PLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPM-LGDFGLAKT- 122
+T P+ + K L + L Y+H I HRD+ P N+L+ D + L DFG AK
Sbjct: 116 KQTLPVIYVKLYMYQL--FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
Query: 123 QREDSDYSTETGVVGTLGYLAPEYV-ECGKLSTKTDVYSFGVVLLQLITG 171
R + + S + + Y APE + ++ DV+S G VL +L+ G
Sbjct: 174 VRGEPNVS----YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 104/240 (43%), Gaps = 27/240 (11%)
Query: 8 KDASSQGDREFKSEVQVLSK-ARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHT 66
++A +Q +++E+ L+K +H + ++ L ++ + + N L+ L K
Sbjct: 91 EEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKK-K 149
Query: 67 RTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQRED 126
++ WE R + + +H++ I+H D+ P N L+ ++ DFG+A + D
Sbjct: 150 KSIDPWE-RKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPD 207
Query: 127 SDYSTETGVVGTLGYLAPEYVECGKLSTKT-----------DVYSFGVVLLQLITGLKTN 175
+ + VGT+ Y+ PE ++ S + DV+S G +L + G
Sbjct: 208 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 267
Query: 176 DKTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQKRLPM 235
+ + + + E +PD+ + + D + K CL +DP++R+ +
Sbjct: 268 QQIINQISKLHAIIDPNHEIEFPDIPEKDLQD------------VLKCCLKRDPKQRISI 315
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 84/170 (49%), Gaps = 19/170 (11%)
Query: 15 DREFKS-EVQVLSKARHENVVML-LGSCSDGNKRLLVY-----EYVCNG--SLDQHLSKH 65
D+ FK+ E+Q++ K H N+V L S G K+ VY +YV + +H S+
Sbjct: 94 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 153
Query: 66 TRT-PLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPM-LGDFGLAKT- 122
+T P+ + K L + L Y+H I HRD+ P N+L+ D + L DFG AK
Sbjct: 154 KQTLPVIYVKLYMYQL--FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 211
Query: 123 QREDSDYSTETGVVGTLGYLAPEYV-ECGKLSTKTDVYSFGVVLLQLITG 171
R + + S + + Y APE + ++ DV+S G VL +L+ G
Sbjct: 212 VRGEPNVS----YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 257
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 84/170 (49%), Gaps = 19/170 (11%)
Query: 15 DREFKS-EVQVLSKARHENVVML-LGSCSDGNKRLLVY-----EYVCNG--SLDQHLSKH 65
D+ FK+ E+Q++ K H N+V L S G K+ VY +YV + +H S+
Sbjct: 61 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 120
Query: 66 TRT-PLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPM-LGDFGLAKT- 122
+T P+ + K L + L Y+H I HRD+ P N+L+ D + L DFG AK
Sbjct: 121 KQTLPVIYVKLYMYQL--FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 178
Query: 123 QREDSDYSTETGVVGTLGYLAPEYV-ECGKLSTKTDVYSFGVVLLQLITG 171
R + + S + + Y APE + ++ DV+S G VL +L+ G
Sbjct: 179 VRGEPNVS----YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 224
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 84/170 (49%), Gaps = 19/170 (11%)
Query: 15 DREFKS-EVQVLSKARHENVVML-LGSCSDGNKRLLVY-----EYVCNG--SLDQHLSKH 65
D+ FK+ E+Q++ K H N+V L S G K+ VY +YV + +H S+
Sbjct: 84 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 143
Query: 66 TRT-PLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPM-LGDFGLAKT- 122
+T P+ + K L + L Y+H I HRD+ P N+L+ D + L DFG AK
Sbjct: 144 KQTLPVIYVKLYMYQL--FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 201
Query: 123 QREDSDYSTETGVVGTLGYLAPEYV-ECGKLSTKTDVYSFGVVLLQLITG 171
R + + S + + Y APE + ++ DV+S G VL +L+ G
Sbjct: 202 VRGEPNVS----YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 247
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 84/170 (49%), Gaps = 19/170 (11%)
Query: 15 DREFKS-EVQVLSKARHENVVML-LGSCSDGNKRLLVY-----EYVCNG--SLDQHLSKH 65
D+ FK+ E+Q++ K H N+V L S G K+ VY +YV + +H S+
Sbjct: 135 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 194
Query: 66 TRT-PLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPM-LGDFGLAKT- 122
+T P+ + K L + L Y+H I HRD+ P N+L+ D + L DFG AK
Sbjct: 195 KQTLPVIYVKLYMYQL--FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 252
Query: 123 QREDSDYSTETGVVGTLGYLAPEYV-ECGKLSTKTDVYSFGVVLLQLITG 171
R + + S + + Y APE + ++ DV+S G VL +L+ G
Sbjct: 253 VRGEPNVS----YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 298
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 76/177 (42%), Gaps = 17/177 (9%)
Query: 12 SQGDRE-FKSEVQVLSKARHENVVMLLGSC----SDGNKRLLVYEYVCNGSLDQHLS--K 64
Q DRE + E + H N++ L+ C ++ L+ + G+L + K
Sbjct: 66 EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLK 125
Query: 65 HTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGL----- 119
L+ ++ + + LG +GL+ +H HRD+ P NIL+ + +P+L D G
Sbjct: 126 DKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQAC 185
Query: 120 --AKTQREDSDYSTETGVVGTLGYLAPEYVECGK---LSTKTDVYSFGVVLLQLITG 171
+ R+ T+ Y APE + +TDV+S G VL ++ G
Sbjct: 186 IHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFG 242
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 66/128 (51%), Gaps = 14/128 (10%)
Query: 52 YVCNGSLDQHLSKHTRTPLSWEKRM------KIALGAAKGLQYLHEN-NIIHRDMGPNNI 104
++C +D L K + + + + KIA+ K L++LH ++IHRD+ P+N+
Sbjct: 126 WICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNV 185
Query: 105 LVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYV--ECGK--LSTKTDVYS 160
L+ + + DFG++ D +T G Y+APE + E + S K+D++S
Sbjct: 186 LINALGQVKMCDFGISGYL---VDSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWS 242
Query: 161 FGVVLLQL 168
G+ +++L
Sbjct: 243 LGITMIEL 250
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 96 HRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTK 155
HRD+ P NILV+ D L DFG+A D + VGTL Y APE + +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASAT-TDEKLTQLGNTVGTLYYXAPERFSESHATYR 215
Query: 156 TDVYSFGVVLLQLITG 171
D+Y+ VL + +TG
Sbjct: 216 ADIYALTCVLYECLTG 231
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 78/168 (46%), Gaps = 20/168 (11%)
Query: 21 EVQVLSKARHENVVML---LGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMK 77
E+ +L + +H NV+ L S +D K L+++Y + H+ K R + +K ++
Sbjct: 68 EIALLRELKHPNVISLQKVFLSHAD-RKVWLLFDYAEHDLW--HIIKFHRASKANKKPVQ 124
Query: 78 IALGAAK--------GLQYLHENNIIHRDMGPNNILVTHDFEP----MLGDFGLAKTQRE 125
+ G K G+ YLH N ++HRD+ P NILV + + D G A+
Sbjct: 125 LPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNS 184
Query: 126 D-SDYSTETGVVGTLGYLAPEYVECGKLSTKT-DVYSFGVVLLQLITG 171
+ VV T Y APE + + TK D+++ G + +L+T
Sbjct: 185 PLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS 232
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 71/174 (40%), Gaps = 9/174 (5%)
Query: 1 MIAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
++AVK + + + D K E+ RH N+V +V EY G L +
Sbjct: 46 LVAVK-YIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFE 104
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPML--GDFG 118
+ R S ++ G+ Y H + HRD+ N L+ P L DFG
Sbjct: 105 RICNAGR--FSEDEARFFFQQLISGVSYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFG 162
Query: 119 LAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTK-TDVYSFGVVLLQLITG 171
+K +S VGT Y+APE + + K DV+S GV L ++ G
Sbjct: 163 YSKAS---VLHSQPKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 84/181 (46%), Gaps = 34/181 (18%)
Query: 20 SEVQVLSKARHENVVMLLGSCSDGNKRLLV-YEYVCNGSLDQHLSKHTRTPLSWEKRMKI 78
+E+Q L+ A ++ VM + C N +++ Y+ + S L+ LS+++ +
Sbjct: 68 AELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNS-----LSFQEVREY 122
Query: 79 ALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEP-MLGDFGLAK---------------- 121
L K L+ +H+ I+HRD+ P+N L + L DFGLA+
Sbjct: 123 MLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSE 182
Query: 122 TQREDSDYSTETGVV----------GTLGYLAPEYV-ECGKLSTKTDVYSFGVVLLQLIT 170
Q+E + + + GT G+ APE + +C +T D++S GV+ L L++
Sbjct: 183 AQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLS 242
Query: 171 G 171
G
Sbjct: 243 G 243
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 72/174 (41%), Gaps = 9/174 (5%)
Query: 1 MIAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
++AVK + + + D K E+ RH N+V +V EY G L +
Sbjct: 45 LVAVK-YIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFE 103
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLG--DFG 118
+ R S ++ G+ Y H + HRD+ N L+ P L DFG
Sbjct: 104 RICNAGR--FSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFG 161
Query: 119 LAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTK-TDVYSFGVVLLQLITG 171
+K+ +S VGT Y+APE + + K DV+S GV L ++ G
Sbjct: 162 YSKSS---VLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 212
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/240 (20%), Positives = 103/240 (42%), Gaps = 27/240 (11%)
Query: 8 KDASSQGDREFKSEVQVLSK-ARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHT 66
++A +Q +++E+ L+K +H + ++ L ++ + + N L+ L K
Sbjct: 91 EEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKK-K 149
Query: 67 RTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQRED 126
++ WE R + + +H++ I+H D+ P N L+ ++ DFG+A + D
Sbjct: 150 KSIDPWE-RKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPD 207
Query: 127 SDYSTETGVVGTLGYLAPEYVECGKLSTKT-----------DVYSFGVVLLQLITGLKTN 175
+ + VG + Y+ PE ++ S + DV+S G +L + G
Sbjct: 208 TTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 267
Query: 176 DKTLGEKGLVGWARPLLKERNYPDLIDPRIIDCYDVHQLFWMVQIAKKCLSKDPQKRLPM 235
+ + + + E +PD+ + + D + K CL +DP++R+ +
Sbjct: 268 QQIINQISKLHAIIDPNHEIEFPDIPEKDLQD------------VLKCCLKRDPKQRISI 315
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 72/174 (41%), Gaps = 9/174 (5%)
Query: 1 MIAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
++AVK + + + D + E+ RH N+V ++ EY G L +
Sbjct: 47 LVAVK-YIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYE 105
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLG--DFG 118
+ R S ++ G+ Y H I HRD+ N L+ P L DFG
Sbjct: 106 RICNAGR--FSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFG 163
Query: 119 LAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTK-TDVYSFGVVLLQLITG 171
+K+ +S VGT Y+APE + + K DV+S GV L ++ G
Sbjct: 164 YSKSSVL---HSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVG 214
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 81/171 (47%), Gaps = 18/171 (10%)
Query: 13 QGDREFKSEVQVLSKARHENVVML-LGSCSDGNKRLLVY-----EYVCNG--SLDQHLSK 64
QG E+Q++ K H N+V L S G K+ VY +YV + +H S+
Sbjct: 55 QGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSR 114
Query: 65 HTRT-PLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPM-LGDFGLAKT 122
+T P+ + K L + L Y+H I HRD+ P N+L+ D + L DFG AK
Sbjct: 115 AKQTLPVIYVKLYMYQL--FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 172
Query: 123 -QREDSDYSTETGVVGTLGYLAPEYV-ECGKLSTKTDVYSFGVVLLQLITG 171
R + + S + + Y APE + ++ DV+S G VL +L+ G
Sbjct: 173 LVRGEPNVSX----ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 81/171 (47%), Gaps = 18/171 (10%)
Query: 13 QGDREFKSEVQVLSKARHENVVML-LGSCSDGNKRLLVY-----EYVCNG--SLDQHLSK 64
QG E+Q++ K H N+V L S G K+ VY +YV + +H S+
Sbjct: 55 QGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 114
Query: 65 HTRT-PLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPM-LGDFGLAKT 122
+T P+ + K L + L Y+H I HRD+ P N+L+ D + L DFG AK
Sbjct: 115 AKQTLPVIYVKLYMYQL--FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 172
Query: 123 -QREDSDYSTETGVVGTLGYLAPEYV-ECGKLSTKTDVYSFGVVLLQLITG 171
R + + S + + Y APE + ++ DV+S G VL +L+ G
Sbjct: 173 LVRGEPNVS----YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 81/171 (47%), Gaps = 18/171 (10%)
Query: 13 QGDREFKSEVQVLSKARHENVVML-LGSCSDGNKRLLVY-----EYVCNG--SLDQHLSK 64
QG E+Q++ K H N+V L S G K+ VY +YV + +H S+
Sbjct: 55 QGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 114
Query: 65 HTRT-PLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPM-LGDFGLAKT 122
+T P+ + K L + L Y+H I HRD+ P N+L+ D + L DFG AK
Sbjct: 115 AKQTLPVIYVKLYMYQL--FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 172
Query: 123 -QREDSDYSTETGVVGTLGYLAPEYV-ECGKLSTKTDVYSFGVVLLQLITG 171
R + + S + + Y APE + ++ DV+S G VL +L+ G
Sbjct: 173 LVRGEPNVS----YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 84/185 (45%), Gaps = 43/185 (23%)
Query: 21 EVQVLSKAR-HENVVMLLGSCSDGNKRLL-VYEYVCNGSL----------DQHLS-KHTR 67
E+++L+++ H NV+ CS+ R L + +CN +L D++L +
Sbjct: 58 EIKLLTESDDHPNVIRYY--CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEY 115
Query: 68 TPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVT-------------HDFEPML 114
P+S +++ A G+ +LH IIHRD+ P NILV+ + ++
Sbjct: 116 NPISLLRQI------ASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILI 169
Query: 115 GDFGLAKT--QREDSDYSTETGVVGTLGYLAPEYVECG-------KLSTKTDVYSFGVVL 165
DFGL K + S + GT G+ APE +E +L+ D++S G V
Sbjct: 170 SDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVF 229
Query: 166 LQLIT 170
+++
Sbjct: 230 YYILS 234
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 72/155 (46%), Gaps = 11/155 (7%)
Query: 21 EVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKIAL 80
EV +L + +H N++ L ++ L++EY N L +++ K+ + K L
Sbjct: 83 EVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQL 141
Query: 81 GAAKGLQYLHENNIIHRDMGPNNILVT---HDFEPML--GDFGLAKTQREDSDYSTETGV 135
G+ + H +HRD+ P N+L++ P+L GDFGLA+ T
Sbjct: 142 --INGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF--GIPIRQFTHE 197
Query: 136 VGTLGYLAPEYVECGK-LSTKTDVYSFGVVLLQLI 169
+ TL Y PE + + ST D++S + +++
Sbjct: 198 IITLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 64/161 (39%), Gaps = 9/161 (5%)
Query: 18 FKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMK 77
F+ E VL + L + D N LV EY G L LSK + R
Sbjct: 108 FREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFY 167
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
+A + +H +HRD+ P+NIL+ L DFG R D + VG
Sbjct: 168 LA-EIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVA-VG 225
Query: 138 TLGYLAPEYVEC-------GKLSTKTDVYSFGVVLLQLITG 171
T YL+PE ++ G + D ++ GV ++ G
Sbjct: 226 TPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYG 266
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 74/159 (46%), Gaps = 17/159 (10%)
Query: 23 QVLSKARHENVVMLLGSCSDGNKR-----LLVYEYVCNGSLDQHLSKHTRTPLSWEKRMK 77
Q L++ H ++V + ++ +V EYV SL + SK + P++ + +
Sbjct: 131 QFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKR--SKGQKLPVA--EAIA 186
Query: 78 IALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDYSTETGVVG 137
L L YLH +++ D+ P NI++T + + L D G A ++ Y + G
Sbjct: 187 YLLEILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLG-AVSRINSFGY-----LYG 239
Query: 138 TLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITGLKTND 176
T G+ APE V G + TD+Y+ G L L L T +
Sbjct: 240 TPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRN 277
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 82/181 (45%), Gaps = 39/181 (21%)
Query: 21 EVQVLSKAR-HENVVMLLGSCSDGNKRLL-VYEYVCNGSL----------DQHLS-KHTR 67
E+++L+++ H NV+ CS+ R L + +CN +L D++L +
Sbjct: 76 EIKLLTESDDHPNVIRYY--CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEY 133
Query: 68 TPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVT-------------HDFEPML 114
P+S +++ A G+ +LH IIHRD+ P NILV+ + ++
Sbjct: 134 NPISLLRQI------ASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILI 187
Query: 115 GDFGLAKT--QREDSDYSTETGVVGTLGYLAPEYVECG---KLSTKTDVYSFGVVLLQLI 169
DFGL K + GT G+ APE +E +L+ D++S G V ++
Sbjct: 188 SDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYIL 247
Query: 170 T 170
+
Sbjct: 248 S 248
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 82/181 (45%), Gaps = 39/181 (21%)
Query: 21 EVQVLSKAR-HENVVMLLGSCSDGNKRLL-VYEYVCNGSL----------DQHLS-KHTR 67
E+++L+++ H NV+ CS+ R L + +CN +L D++L +
Sbjct: 76 EIKLLTESDDHPNVIRYY--CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEY 133
Query: 68 TPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVT-------------HDFEPML 114
P+S +++ A G+ +LH IIHRD+ P NILV+ + ++
Sbjct: 134 NPISLLRQI------ASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILI 187
Query: 115 GDFGLAKT--QREDSDYSTETGVVGTLGYLAPEYVECG---KLSTKTDVYSFGVVLLQLI 169
DFGL K + GT G+ APE +E +L+ D++S G V ++
Sbjct: 188 SDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYIL 247
Query: 170 T 170
+
Sbjct: 248 S 248
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 63/156 (40%), Gaps = 8/156 (5%)
Query: 19 KSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTPLSWEKRMKI 78
K E+ RH N+V +V EY G L + + R S ++
Sbjct: 63 KREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR--FSEDEARFF 120
Query: 79 ALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLG--DFGLAKTQREDSDYSTETGVV 136
G+ Y H + HRD+ N L+ P L DFG +K+ +S V
Sbjct: 121 FQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSS---VLHSQPKSTV 177
Query: 137 GTLGYLAPEYVECGKLSTK-TDVYSFGVVLLQLITG 171
GT Y+APE + + K DV+S GV L ++ G
Sbjct: 178 GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 73/158 (46%), Gaps = 13/158 (8%)
Query: 17 EFKSEVQVLSKARH-ENVVMLLGSCSDGNKR--LLVYEYVCNGSLDQHLSKHTRTPLSWE 73
+ K E+++L R N++ L D R LV+E+V N Q +T ++
Sbjct: 77 KIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYD 132
Query: 74 KRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPM-LGDFGLAKTQREDSDYSTE 132
R + K L Y H I+HRD+ P+N+++ H+ + L D+GLA+ +Y+
Sbjct: 133 IRFYM-YEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR 191
Query: 133 TGVVGTLGYLAPE-YVECGKLSTKTDVYSFGVVLLQLI 169
V + + PE V+ D++S G +L +I
Sbjct: 192 ---VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 226
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 71/174 (40%), Gaps = 9/174 (5%)
Query: 1 MIAVKQHKDASSQGDREFKSEVQVLSKARHENVVMLLGSCSDGNKRLLVYEYVCNGSLDQ 60
++AVK + + + D K E+ RH N+V +V EY G L +
Sbjct: 46 LVAVK-YIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFE 104
Query: 61 HLSKHTRTPLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLG--DFG 118
+ R S ++ G+ Y H + HRD+ N L+ P L FG
Sbjct: 105 RICNAGR--FSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFG 162
Query: 119 LAKTQREDSDYSTETGVVGTLGYLAPEYVECGKLSTK-TDVYSFGVVLLQLITG 171
+K+ +S VGT Y+APE + + K DV+S GV L ++ G
Sbjct: 163 YSKSS---VLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 79/169 (46%), Gaps = 17/169 (10%)
Query: 15 DREFKS-EVQVLSKARHENVVMLLGSC-SDGNKR-----LLVYEYVCNG--SLDQHLSKH 65
D+ FK+ E+Q++ +H NVV L S+G+K+ LV EYV +H +K
Sbjct: 75 DKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKL 134
Query: 66 TRT-PLSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPM-LGDFGLAKTQ 123
+T P+ K L + L Y+H I HRD+ P N+L+ + L DFG AK
Sbjct: 135 KQTMPMLLIKLYMYQL--LRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL 192
Query: 124 REDSDYSTETGVVGTLGYLAPEYV-ECGKLSTKTDVYSFGVVLLQLITG 171
+ + Y APE + +T D++S G V+ +L+ G
Sbjct: 193 IAG---EPNVSXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQG 238
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 73/164 (44%), Gaps = 14/164 (8%)
Query: 16 REFKSEVQVLSKARHE------NVVMLLGSCSDGNKRLLVYEYVCNGSLDQHLSKHTRTP 69
R+ E+++L R + NV+ +L + + N + +E + + +L + + K+
Sbjct: 138 RQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFE-LLSMNLYELIKKNKFQG 196
Query: 70 LSWEKRMKIALGAAKGLQYLHENNIIHRDMGPNNILVTHDFEPMLGDFGLAKTQREDSDY 129
S K A + L LH+N IIH D+ P NIL+ G G+ S Y
Sbjct: 197 FSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQ-----GRSGIKVIDFGSSCY 251
Query: 130 STET--GVVGTLGYLAPEYVECGKLSTKTDVYSFGVVLLQLITG 171
+ + + Y APE + + D++S G +L +L+TG
Sbjct: 252 EHQRVYXXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,123,722
Number of Sequences: 62578
Number of extensions: 357264
Number of successful extensions: 3294
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1030
Number of HSP's successfully gapped in prelim test: 70
Number of HSP's that attempted gapping in prelim test: 877
Number of HSP's gapped (non-prelim): 1175
length of query: 338
length of database: 14,973,337
effective HSP length: 99
effective length of query: 239
effective length of database: 8,778,115
effective search space: 2097969485
effective search space used: 2097969485
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)