AmiGO: BLAST Results


BLAST match view associations BLAST with HB6 HB6 HB6 homeobox protein 6	protein from Arabidopsis thaliana	7.8e-62
BLAST match view associations BLAST with HB16 HB16 HB16 AT4G40060	protein from Arabidopsis thaliana	2.6e-57
BLAST match view associations BLAST with HB5 HB5 HB5 homeobox protein 5	protein from Arabidopsis thaliana	4.2e-53
BLAST match view associations BLAST with HB-1 HB-1 HB-1 AT3G01470	protein from Arabidopsis thaliana	1.1e-32
BLAST match view associations BLAST with ATHB13 ATHB13 ATHB13 AT1G69780	protein from Arabidopsis thaliana	2.3e-32
BLAST match view associations BLAST with HB20 HB20 HB20 AT3G01220	protein from Arabidopsis thaliana	3.0e-30
BLAST match view associations BLAST with HB-3 HB-3 HB-3 AT5G15150	protein from Arabidopsis thaliana	3.4e-29
BLAST match view associations BLAST with HB-7 HB-7 HB-7 homeobox 7	protein from Arabidopsis thaliana	1.9e-28
BLAST match view associations BLAST with AtHB23 AtHB23 AtHB23 AT1G26960	protein from Arabidopsis thaliana	1.2e-26
BLAST match view associations BLAST with HB-12 HB-12 HB-12 homeobox 12	protein from Arabidopsis thaliana	2.2e-25
BLAST match view associations BLAST with HB51 HB51 HB51 AT5G03790	protein from Arabidopsis thaliana	7.0e-22
BLAST match view associations BLAST with HB21 HB21 HB21 AT2G18550	protein from Arabidopsis thaliana	2.4e-21
BLAST match view associations BLAST with HB53 HB53 HB53 AT5G66700	protein from Arabidopsis thaliana	3.5e-20
BLAST match view associations BLAST with HB22 HB22 HB22 AT2G36610	protein from Arabidopsis thaliana	1.5e-19
BLAST match view associations BLAST with HB40 HB40 HB40 AT4G36740	protein from Arabidopsis thaliana	1.5e-19
BLAST match view associations BLAST with HB52 HB52 HB52 homeobox protein 52	protein from Arabidopsis thaliana	7.5e-18
BLAST match view associations BLAST with HAT14 HAT14 HAT14 AT5G06710	protein from Arabidopsis thaliana	3.7e-14
BLAST match view associations BLAST with HB4 HB4 HB4 AT2G44910	protein from Arabidopsis thaliana	1.1e-13
BLAST match view associations BLAST with HAT22 HAT22 HAT22	protein from Arabidopsis thaliana	2.9e-13
BLAST match view associations BLAST with HAT1 HAT1 HAT1 AT4G17460	protein from Arabidopsis thaliana	6.7e-13
BLAST match view associations BLAST with HAT2 HAT2 HAT2	protein from Arabidopsis thaliana	7.0e-13
BLAST match view associations BLAST with HB-2 HB-2 HB-2 AT4G16780	protein from Arabidopsis thaliana	7.2e-13
BLAST match view associations BLAST with HAT3 HAT3 HAT3 homeobox-leucine zipper protein 3	protein from Arabidopsis thaliana	1.8e-12
BLAST match view associations BLAST with HAT9 HAT9 HAT9 AT2G22800	protein from Arabidopsis thaliana	2.7e-12
BLAST match view associations BLAST with HB17 HB17 HB17 homeobox-leucine zipper protein 17	protein from Arabidopsis thaliana	2.5e-11
BLAST match view associations BLAST with HB18 HB18 HB18 AT1G70920	protein from Arabidopsis thaliana	4.4e-11
BLAST match view associations BLAST with HHEX HHEX HHEX Uncharacterized protein	protein from Sus scrofa	5.9e-10
BLAST match view associations BLAST with HHEX HHEX HHEX HHEX protein	protein from Bos taurus	8.4e-10
BLAST match view associations BLAST with HHEX HHEX HHEX Uncharacterized protein	protein from Canis lupus familiaris	2.6e-09
BLAST match view associations BLAST with HHEX HHEX HHEX Hematopoietically-expressed homeobox protein HHEX	protein from Homo sapiens	4.6e-09
BLAST match view associations BLAST with Hhex Hhex Hhex hematopoietically expressed homeobox	gene from Rattus norvegicus	6.1e-09
BLAST match view associations BLAST with hhex hhex hhex Hematopoietically-expressed homeobox protein hhex	protein from Xenopus (Silurana) tropicalis	8.5e-09
BLAST match view associations BLAST with Hhex Hhex Hhex hematopoietically expressed homeobox	protein from Mus musculus	2.5e-08
BLAST match view associations BLAST with hhex hhex hhex Hematopoietically-expressed homeobox protein hhex	protein from Xenopus laevis	4.5e-08
BLAST match view associations BLAST with pha-2 pha-2 pha-2	gene from Caenorhabditis elegans	5.0e-08
BLAST match view associations BLAST with DBX2 DBX2 DBX2 Homeobox protein DBX2	protein from Gallus gallus	8.2e-08
BLAST match view associations BLAST with DBX2 DBX2 DBX2 Homeobox protein DBX2	protein from Gallus gallus	8.2e-08
BLAST match view associations BLAST with DBX2 DBX2 DBX2 Homeobox protein DBX2	protein from Gallus gallus	8.2e-08
BLAST match view associations BLAST with NOBOX NOBOX NOBOX Homeobox protein NOBOX	protein from Homo sapiens	1.8e-07
BLAST match view associations BLAST with NKX6-2 NKX6-2 NKX6-2 Uncharacterized protein	protein from Gallus gallus	3.8e-07
BLAST match view associations BLAST with HLX HLX HLX H2.0-like homeobox protein	protein from Homo sapiens	3.8e-07
BLAST match view associations BLAST with LOC516179 LOC516179 LOC516179 Uncharacterized protein	protein from Bos taurus	5.0e-07
BLAST match view associations BLAST with HHEX HHEX HHEX Hematopoietically-expressed homeobox protein HHEX	protein from Gallus gallus	7.5e-07
BLAST match view associations BLAST with hhex hhex hhex hematopoietically expressed homeobox	gene_product from Danio rerio	8.3e-07
BLAST match view associations BLAST with hopx hopx hopx HOP homeobox	gene_product from Danio rerio	8.3e-07
BLAST match view associations BLAST with TLX3 TLX3 TLX3 T-cell leukemia homeobox protein 3	protein from Gallus gallus	1.1e-06
BLAST match view associations BLAST with Gga.48067 Gga.48067 Gga.48067 Uncharacterized protein	protein from Gallus gallus	1.4e-06
BLAST match view associations BLAST with ceh-9 ceh-9 ceh-9	gene from Caenorhabditis elegans	1.4e-06
BLAST match view associations BLAST with HHEX HHEX HHEX Hematopoietically-expressed homeobox protein HHEX	protein from Gallus gallus	1.7e-06
BLAST match view associations BLAST with HOXA4 HOXA4 HOXA4 Homeobox protein Hox-A4	protein from Homo sapiens	1.8e-06
BLAST match view associations BLAST with NKX3-1 NKX3-1 NKX3-1 Uncharacterized protein	protein from Equus caballus	1.8e-06
BLAST match view associations BLAST with Hoxc4 Hoxc4 Hoxc4 homeo box C4	gene from Rattus norvegicus	1.8e-06
BLAST match view associations BLAST with Hoxc4 Hoxc4 Hoxc4 Homeobox protein Hox-C4	protein from Rattus norvegicus	1.8e-06
BLAST match view associations BLAST with HHEX HHEX HHEX Hematopoietically-expressed homeobox protein HHEX	protein from Gallus gallus	1.8e-06
BLAST match view associations BLAST with HOXD8 HOXD8 HOXD8 Homeobox protein Hox-D8	protein from Gallus gallus	2.3e-06
BLAST match view associations BLAST with NKX3-1 NKX3-1 NKX3-1 Uncharacterized protein	protein from Canis lupus familiaris	2.3e-06
BLAST match view associations BLAST with HOXB8 HOXB8 HOXB8 Homeobox protein Hox-B8	protein from Homo sapiens	2.3e-06
BLAST match view associations BLAST with PANDA_002743 PANDA_002743 PANDA_002743 Putative uncharacterized protein	protein from Ailuropoda melanoleuca	2.3e-06
BLAST match view associations BLAST with Hoxb8 Hoxb8 Hoxb8 homeo box B8	gene from Rattus norvegicus	2.3e-06
BLAST match view associations BLAST with Hoxc9 Hoxc9 Hoxc9 homeobox C9	gene from Rattus norvegicus	2.3e-06
BLAST match view associations BLAST with Hoxc8 Hoxc8 Hoxc8 Homeobox protein Hox-C8	protein from Rattus norvegicus	2.3e-06
BLAST match view associations BLAST with HOXB8 HOXB8 HOXB8 Homeobox protein Hox-B8	protein from Sus scrofa	3.8e-06
BLAST match view associations BLAST with MEOX1 MEOX1 MEOX1 Homeobox protein MOX-1	protein from Homo sapiens	4.9e-06
BLAST match view associations BLAST with HOXB5 HOXB5 HOXB5 Homeobox protein Hox-B5	protein from Gallus gallus	6.3e-06
BLAST match view associations BLAST with HOXB6 HOXB6 HOXB6 Homeobox protein Hox-B6	protein from Gallus gallus	6.3e-06
BLAST match view associations BLAST with ceh-5 ceh-5 ceh-5	gene from Caenorhabditis elegans	6.3e-06
BLAST match view associations BLAST with DBX2 DBX2 DBX2 Homeobox protein DBX2	protein from Gallus gallus	7.0e-06
BLAST match view associations BLAST with Nkx3-1 Nkx3-1 Nkx3-1 NK-3 transcription factor, locus 1 (Drosophila)	protein from Mus musculus	7.1e-06
BLAST match view associations BLAST with MEOX2 MEOX2 MEOX2 Uncharacterized protein	protein from Gallus gallus	7.7e-06
BLAST match view associations BLAST with Dbx1 Dbx1 Dbx1 developing brain homeobox 1	protein from Mus musculus	7.9e-06
BLAST match view associations BLAST with Dbx1 Dbx1 Dbx1 developing brain homeobox 1	gene from Rattus norvegicus	7.9e-06
BLAST match view associations BLAST with CDX4 CDX4 CDX4 Uncharacterized protein	protein from Gallus gallus	8.2e-06
BLAST match view associations BLAST with HOXD11 HOXD11 HOXD11 Homeobox protein Hox-D11	protein from Gallus gallus	8.2e-06
BLAST match view associations BLAST with HOXB7 HOXB7 HOXB7 Uncharacterized protein	protein from Gallus gallus	8.2e-06
BLAST match view associations BLAST with HOXD1 HOXD1 HOXD1 Homeobox protein Hox-D1	protein from Gallus gallus	8.2e-06
BLAST match view associations BLAST with Hoxa7 Hoxa7 Hoxa7 homeobox A7	gene from Rattus norvegicus	8.2e-06
BLAST match view associations BLAST with DBX2 DBX2 DBX2 Uncharacterized protein	protein from Canis lupus familiaris	9.0e-06
BLAST match view associations BLAST with lbx1 lbx1 lbx1 Transcription factor LBX1	protein from Xenopus (Silurana) tropicalis	1.0e-05
BLAST match view associations BLAST with TLX1 TLX1 TLX1 T-cell leukemia homeobox protein 1	protein from Gallus gallus	1.1e-05
BLAST match view associations BLAST with HDG4 HDG4 HDG4 AT4G17710	protein from Arabidopsis thaliana	1.2e-05
BLAST match view associations BLAST with CDX2 CDX2 CDX2 Uncharacterized protein	protein from Bos taurus	1.4e-05
BLAST match view associations BLAST with NKX6-2 NKX6-2 NKX6-2 Homeobox protein Nkx-6.2	protein from Homo sapiens	1.5e-05
BLAST match view associations BLAST with F1NPY3 F1NPY3 F1NPY3 Uncharacterized protein	protein from Gallus gallus	1.5e-05
BLAST match view associations BLAST with nkx6.2 nkx6.2 nkx6.2 NK6 transcription factor related, locus 2	gene_product from Danio rerio	1.5e-05
BLAST match view associations BLAST with dbx1a dbx1a dbx1a developing brain homeobox 1a	gene_product from Danio rerio	1.5e-05
BLAST match view associations BLAST with dbx1b dbx1b dbx1b developing brain homeobox 1b	gene_product from Danio rerio	1.6e-05
BLAST match view associations BLAST with HGTX HGTX HGTX	protein from Drosophila melanogaster	1.6e-05
BLAST match view associations BLAST with Nkx3-1 Nkx3-1 Nkx3-1 NK3 homeobox 1	gene from Rattus norvegicus	1.6e-05
BLAST match view associations BLAST with CDX1 CDX1 CDX1 Homeobox protein CDX-1	protein from Gallus gallus	1.8e-05
BLAST match view associations BLAST with BARX2 BARX2 BARX2 Homeobox protein BarH-like 2	protein from Homo sapiens	1.8e-05
BLAST match view associations BLAST with I3LRX4 I3LRX4 I3LRX4 Uncharacterized protein	protein from Sus scrofa	1.8e-05
BLAST match view associations BLAST with ceh-19 ceh-19 ceh-19	gene from Caenorhabditis elegans	1.8e-05
BLAST match view associations BLAST with DBX1 DBX1 DBX1 Uncharacterized protein	protein from Gallus gallus	1.8e-05
BLAST match view associations BLAST with DBX1 DBX1 DBX1 Homeobox protein DBX1	protein from Homo sapiens	1.8e-05
BLAST match view associations BLAST with DBX1 DBX1 DBX1 Uncharacterized protein	protein from Sus scrofa	1.8e-05
BLAST match view associations BLAST with DBX1 DBX1 DBX1 Homeobox protein DBX1	protein from Bos taurus	1.9e-05
BLAST match view associations BLAST with lbx2 lbx2 lbx2 ladybird homeobox homolog 2 (Drosophila)	gene_product from Danio rerio	2.1e-05
BLAST match view associations BLAST with HDG11 HDG11 HDG11 AT1G73360	protein from Arabidopsis thaliana	2.1e-05
BLAST match view associations BLAST with Gga.20677 Gga.20677 Gga.20677 Uncharacterized protein	protein from Gallus gallus	2.3e-05
Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  019637
        (338 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2041283 - symbol:HB6 "homeobox protein 6" spec...   531  7.8e-62   2
TAIR|locus:2140055 - symbol:HB16 "homeobox protein 16" sp...   485  2.6e-57   2
TAIR|locus:2168225 - symbol:HB5 "homeobox protein 5" spec...   456  4.2e-53   2
TAIR|locus:2084228 - symbol:HB-1 "homeobox 1" species:370...   357  1.1e-32   1
TAIR|locus:2205075 - symbol:ATHB13 species:3702 "Arabidop...   354  2.3e-32   1
TAIR|locus:2102107 - symbol:HB20 "homeobox protein 20" sp...   334  3.0e-30   1
TAIR|locus:2150901 - symbol:HB-3 "homeobox 3" species:370...   324  3.4e-29   1
TAIR|locus:2062754 - symbol:HB-7 "homeobox 7" species:370...   317  1.9e-28   1
TAIR|locus:2202795 - symbol:AtHB23 "homeobox protein 23" ...   300  1.2e-26   1
TAIR|locus:2079542 - symbol:HB-12 "homeobox 12" species:3...   288  2.2e-25   1
TAIR|locus:2144578 - symbol:HB51 "homeobox 51" species:37...   255  7.0e-22   1
TAIR|locus:2046263 - symbol:HB21 "homeobox protein 21" sp...   250  2.4e-21   1
TAIR|locus:2173669 - symbol:HB53 "homeobox 53" species:37...   239  3.5e-20   1
TAIR|locus:2040520 - symbol:HB22 "homeobox protein 22" sp...   233  1.5e-19   1
TAIR|locus:2115215 - symbol:HB40 "homeobox protein 40" sp...   233  1.5e-19   1
TAIR|locus:2154724 - symbol:HB52 "homeobox protein 52" sp...   217  7.5e-18   1
TAIR|locus:2170194 - symbol:HAT14 "homeobox from Arabidop...   196  3.7e-14   1
TAIR|locus:2055028 - symbol:HB4 "homeobox-leucine zipper ...   192  1.1e-13   1
TAIR|locus:2137599 - symbol:HAT22 species:3702 "Arabidops...   186  2.9e-13   1
TAIR|locus:2129061 - symbol:HAT1 species:3702 "Arabidopsi...   184  6.7e-13   1
TAIR|locus:2171489 - symbol:HAT2 species:3702 "Arabidopsi...   184  7.0e-13   1
TAIR|locus:2129136 - symbol:HB-2 "homeobox protein 2" spe...   184  7.2e-13   1
TAIR|locus:2103396 - symbol:HAT3 "homeobox-leucine zipper...   183  1.8e-12   1
TAIR|locus:2059143 - symbol:HAT9 species:3702 "Arabidopsi...   179  2.7e-12   1
TAIR|locus:2049614 - symbol:HB17 "homeobox-leucine zipper...   172  2.5e-11   1
TAIR|locus:2013980 - symbol:HB18 "homeobox-leucine zipper...   156  4.4e-11   1
UNIPROTKB|F1SC87 - symbol:HHEX "Uncharacterized protein" ...   161  5.9e-10   1
UNIPROTKB|A7YWK1 - symbol:HHEX "HHEX protein" species:991...   160  8.4e-10   1
UNIPROTKB|E2QXS9 - symbol:HHEX "Uncharacterized protein" ...   156  2.6e-09   1
UNIPROTKB|Q03014 - symbol:HHEX "Hematopoietically-express...   154  4.6e-09   1
RGD|619932 - symbol:Hhex "hematopoietically expressed hom...   153  6.1e-09   1
UNIPROTKB|Q8AWG6 - symbol:hhex "Hematopoietically-express...   152  8.5e-09   1
MGI|MGI:96086 - symbol:Hhex "hematopoietically expressed ...   148  2.5e-08   1
UNIPROTKB|O13023 - symbol:hhex "Hematopoietically-express...   146  4.5e-08   1
WB|WBGene00004011 - symbol:pha-2 species:6239 "Caenorhabd...   129  5.0e-08   1
UNIPROTKB|F1NXJ0 - symbol:DBX2 "Homeobox protein DBX2" sp...   127  8.2e-08   1
UNIPROTKB|F1P169 - symbol:DBX2 "Homeobox protein DBX2" sp...   127  8.2e-08   1
UNIPROTKB|Q91975 - symbol:DBX2 "Homeobox protein DBX2" sp...   127  8.2e-08   1
UNIPROTKB|G3V2N9 - symbol:NOBOX "Homeobox protein NOBOX" ...   124  1.8e-07   1
UNIPROTKB|F1NYF2 - symbol:NKX6-2 "Uncharacterized protein...   121  3.8e-07   1
UNIPROTKB|F8VWZ5 - symbol:HLX "H2.0-like homeobox protein...   121  3.8e-07   1
UNIPROTKB|F1MZR4 - symbol:LOC516179 "Uncharacterized prot...   120  5.0e-07   1
UNIPROTKB|Q05502 - symbol:HHEX "Hematopoietically-express...   136  7.5e-07   1
ZFIN|ZDB-GENE-980526-299 - symbol:hhex "hematopoietically...   133  8.3e-07   1
ZFIN|ZDB-GENE-031016-2 - symbol:hopx "HOP homeobox" speci...   118  8.3e-07   1
UNIPROTKB|F1NVB2 - symbol:TLX3 "T-cell leukemia homeobox ...   117  1.1e-06   1
UNIPROTKB|H9L184 - symbol:Gga.48067 "Uncharacterized prot...   116  1.4e-06   1
WB|WBGene00000434 - symbol:ceh-9 species:6239 "Caenorhabd...   116  1.4e-06   1
UNIPROTKB|F1NXB2 - symbol:HHEX "Hematopoietically-express...   133  1.7e-06   1
UNIPROTKB|H0YHX3 - symbol:HOXA4 "Homeobox protein Hox-A4"...   115  1.8e-06   1
UNIPROTKB|F6VMK5 - symbol:NKX3-1 "Uncharacterized protein...   115  1.8e-06   1
RGD|1586210 - symbol:Hoxc4 "homeo box C4" species:10116 "...   115  1.8e-06   1
UNIPROTKB|P18865 - symbol:Hoxc4 "Homeobox protein Hox-C4"...   115  1.8e-06   1
UNIPROTKB|F1NES3 - symbol:HHEX "Hematopoietically-express...   133  1.8e-06   1
UNIPROTKB|F1P4U9 - symbol:HOXD8 "Homeobox protein Hox-D8"...   114  2.3e-06   1
UNIPROTKB|F1PRX2 - symbol:NKX3-1 "Uncharacterized protein...   114  2.3e-06   1
UNIPROTKB|I3L383 - symbol:HOXB8 "Homeobox protein Hox-B8"...   114  2.3e-06   1
UNIPROTKB|D2H028 - symbol:PANDA_002743 "Putative uncharac...   114  2.3e-06   1
RGD|1586211 - symbol:Hoxb8 "homeo box B8" species:10116 "...   114  2.3e-06   1
RGD|1595784 - symbol:Hoxc9 "homeobox C9" species:10116 "R...   114  2.3e-06   1
UNIPROTKB|P18866 - symbol:Hoxc8 "Homeobox protein Hox-C8"...   114  2.3e-06   1
UNIPROTKB|P09078 - symbol:HOXB8 "Homeobox protein Hox-B8"...   112  3.8e-06   1
UNIPROTKB|A8MWF9 - symbol:MEOX1 "Homeobox protein MOX-1" ...   111  4.9e-06   1
UNIPROTKB|P14838 - symbol:HOXB5 "Homeobox protein Hox-B5"...   110  6.3e-06   1
UNIPROTKB|P14839 - symbol:HOXB6 "Homeobox protein Hox-B6"...   110  6.3e-06   1
WB|WBGene00000430 - symbol:ceh-5 species:6239 "Caenorhabd...   110  6.3e-06   1
UNIPROTKB|F1NXJ2 - symbol:DBX2 "Homeobox protein DBX2" sp...   127  7.0e-06   1
MGI|MGI:97352 - symbol:Nkx3-1 "NK-3 transcription factor,...   126  7.1e-06   1
UNIPROTKB|F6USR4 - symbol:MEOX2 "Uncharacterized protein"...   112  7.7e-06   1
MGI|MGI:94867 - symbol:Dbx1 "developing brain homeobox 1"...   129  7.9e-06   1
RGD|1308896 - symbol:Dbx1 "developing brain homeobox 1" s...   129  7.9e-06   1
UNIPROTKB|F1NHM4 - symbol:CDX4 "Uncharacterized protein" ...   109  8.2e-06   1
UNIPROTKB|F1P4U7 - symbol:HOXD11 "Homeobox protein Hox-D1...   109  8.2e-06   1
UNIPROTKB|H9KZ47 - symbol:HOXB7 "Uncharacterized protein"...   109  8.2e-06   1
UNIPROTKB|P13544 - symbol:HOXD1 "Homeobox protein Hox-D1"...   109  8.2e-06   1
RGD|1587253 - symbol:Hoxa7 "homeobox A7" species:10116 "R...   109  8.2e-06   1
UNIPROTKB|P09634 - symbol:Hoxa7 "Homeobox protein Hox-A7"...   109  8.2e-06   1
UNIPROTKB|F1PND7 - symbol:DBX2 "Uncharacterized protein" ...   123  9.0e-06   1
UNIPROTKB|Q0P4H6 - symbol:lbx1 "Transcription factor LBX1...   126  1.0e-05   1
UNIPROTKB|F1NNC8 - symbol:TLX1 "T-cell leukemia homeobox ...   108  1.1e-05   1
TAIR|locus:2129396 - symbol:HDG4 "AT4G17710" species:3702...   132  1.2e-05   1
UNIPROTKB|F1MJX0 - symbol:CDX2 "Uncharacterized protein" ...   107  1.4e-05   1
UNIPROTKB|Q9C056 - symbol:NKX6-2 "Homeobox protein Nkx-6....   125  1.5e-05   1
UNIPROTKB|F1NPY3 - symbol:F1NPY3 "Uncharacterized protein...   121  1.5e-05   1
ZFIN|ZDB-GENE-070626-1 - symbol:nkx6.2 "NK6 transcription...   125  1.5e-05   1
ZFIN|ZDB-GENE-000128-8 - symbol:dbx1a "developing brain h...   126  1.5e-05   1
ZFIN|ZDB-GENE-000128-11 - symbol:dbx1b "developing brain ...   126  1.6e-05   1
FB|FBgn0040318 - symbol:HGTX "HGTX" species:7227 "Drosoph...   130  1.6e-05   1
RGD|1305369 - symbol:Nkx3-1 "NK3 homeobox 1" species:1011...   123  1.6e-05   1
UNIPROTKB|F6R243 - symbol:CDX1 "Homeobox protein CDX-1" s...   106  1.8e-05   1
UNIPROTKB|G3V397 - symbol:BARX2 "Homeobox protein BarH-li...   106  1.8e-05   1
UNIPROTKB|I3LRX4 - symbol:I3LRX4 "Uncharacterized protein...   106  1.8e-05   1
WB|WBGene00000442 - symbol:ceh-19 species:6239 "Caenorhab...   120  1.8e-05   1
UNIPROTKB|E1BS07 - symbol:DBX1 "Uncharacterized protein" ...   126  1.8e-05   1
UNIPROTKB|A6NMT0 - symbol:DBX1 "Homeobox protein DBX1" sp...   126  1.8e-05   1
UNIPROTKB|F1SFY4 - symbol:DBX1 "Uncharacterized protein" ...   126  1.8e-05   1
UNIPROTKB|A5PKG8 - symbol:DBX1 "Homeobox protein DBX1" sp...   126  1.9e-05   1
ZFIN|ZDB-GENE-001206-2 - symbol:lbx2 "ladybird homeobox h...   123  2.1e-05   1
TAIR|locus:2206880 - symbol:HDG11 "AT1G73360" species:370...   130  2.1e-05   1
UNIPROTKB|H9L2H7 - symbol:Gga.20677 "Uncharacterized prot...   105  2.3e-05   1

WARNING:  Descriptions of 362 database sequences were not reported due to the
          limiting value of parameter V = 100.


>TAIR|locus:2041283 [details] [associations]
            symbol:HB6 "homeobox protein 6" species:3702 "Arabidopsis
            thaliana" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA;IDA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA;ISS;TAS]
            [GO:0005634 "nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA;ISS]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
            [GO:0009414 "response to water deprivation" evidence=IEP]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0009738 "abscisic
            acid mediated signaling pathway" evidence=TAS] [GO:0009788
            "negative regulation of abscisic acid mediated signaling pathway"
            evidence=IMP] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=IDA] [GO:0009269 "response to desiccation"
            evidence=RCA] [GO:0009409 "response to cold" evidence=RCA]
            [GO:0009651 "response to salt stress" evidence=RCA] [GO:0009737
            "response to abscisic acid stimulus" evidence=RCA] [GO:0042744
            "hydrogen peroxide catabolic process" evidence=RCA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
            PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0045893 EMBL:CP002685 GenomeReviews:CT485783_GR
            GO:GO:0009738 GO:GO:0009414 GO:GO:0043565 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009788
            EMBL:AC006592 GO:GO:0000976 KO:K09338 HOGENOM:HOG000006025
            ProtClustDB:CLSN2685900 EMBL:X67034 EMBL:AY060569 EMBL:AY063819
            EMBL:AY094457 EMBL:AY122903 EMBL:AF104900 IPI:IPI00548532
            PIR:E84612 PIR:S47136 RefSeq:NP_565536.1 UniGene:At.25257
            ProteinModelPortal:P46668 SMR:P46668 STRING:P46668
            EnsemblPlants:AT2G22430.1 GeneID:816775 KEGG:ath:AT2G22430
            GeneFarm:3962 TAIR:At2g22430 eggNOG:NOG255500 InParanoid:P46668
            OMA:ESDISVK PhylomeDB:P46668 Genevestigator:P46668
            GermOnline:AT2G22430 Uniprot:P46668
        Length = 311

 Score = 531 (192.0 bits), Expect = 7.8e-62, Sum P(2) = 7.8e-62
 Identities = 122/194 (62%), Positives = 143/194 (73%)

Query:     1 MKRSLCSSDDSLGALMSICP--ATDEQSPRNNQVYSREFQTMXXXXXXXXXXXXXXX-HV 57
             MKR   SS DS+G L+S+CP  +TDEQSPR  +   REFQ+M                HV
Sbjct:     2 MKR--LSSSDSVGGLISLCPTTSTDEQSPR--RYGGREFQSMLEGYEEEEEAIVEERGHV 57

Query:    58 --SEKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTK 115
               SEKKRRLS++QVKALEKNFE+ENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTK
Sbjct:    58 GLSEKKRRLSINQVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTK 117

Query:   116 QLERDYGVLKANYDALKLNYDSLQHDNEALLKEIRELKSKLN--------EEN-----TE 162
             QLE+DYGVLK  YD+L+ N+DSL+ DNE+LL+EI +LK+KLN        EEN     TE
Sbjct:   118 QLEKDYGVLKTQYDSLRHNFDSLRRDNESLLQEISKLKTKLNGGGGEEEEEENNAAVTTE 177

Query:   163 SNISVKQEETIVHE 176
             S+ISVK+EE  + E
Sbjct:   178 SDISVKEEEVSLPE 191

 Score = 119 (46.9 bits), Expect = 7.8e-62, Sum P(2) = 7.8e-62
 Identities = 25/41 (60%), Positives = 28/41 (68%)

Query:   303 QFVKMEE---HNFF--GDETCNFFSDEQPPSLPWYCS-DQW 337
             QFVKME+   H  F  G+E C FFSDEQPPSL WY + D W
Sbjct:   270 QFVKMEQTEDHEDFLSGEEACEFFSDEQPPSLHWYSTVDHW 310


>TAIR|locus:2140055 [details] [associations]
            symbol:HB16 "homeobox protein 16" species:3702
            "Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA;ISS;NAS] [GO:0005634
            "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA;IDA] [GO:0009637
            "response to blue light" evidence=IMP] [GO:0030308 "negative
            regulation of cell growth" evidence=IMP] [GO:0048510 "regulation of
            timing of transition from vegetative to reproductive phase"
            evidence=IMP] [GO:0048573 "photoperiodism, flowering"
            evidence=RCA;IMP] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=IDA] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0045893 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0030308
            GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0009637
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0048510 GO:GO:0048573
            EMBL:AL161596 GO:GO:0000976 EMBL:AL035708 KO:K09338
            HOGENOM:HOG000006025 EMBL:AF076641 EMBL:AF370620 EMBL:AY054571
            EMBL:AY128917 IPI:IPI00531709 PIR:G85474 PIR:T06112
            RefSeq:NP_195716.1 UniGene:At.20863 ProteinModelPortal:Q940J1
            SMR:Q940J1 PaxDb:Q940J1 PRIDE:Q940J1 EnsemblPlants:AT4G40060.1
            GeneID:830169 KEGG:ath:AT4G40060 GeneFarm:3982 TAIR:At4g40060
            eggNOG:NOG321520 InParanoid:Q940J1 OMA:CDSSAVL PhylomeDB:Q940J1
            ProtClustDB:CLSN2685900 Genevestigator:Q940J1 Uniprot:Q940J1
        Length = 294

 Score = 485 (175.8 bits), Expect = 2.6e-57, Sum P(2) = 2.6e-57
 Identities = 108/187 (57%), Positives = 134/187 (71%)

Query:     1 MKRSLCSSDDSLGALMSICPATDEQSPRNNQVYSREFQTMXXXXXXXXXXXXXXX--H-- 56
             MKR   SS DS+  L+S   +TDEQSPR    Y   +Q+M                 H  
Sbjct:     1 MKR--LSSSDSMCGLIST--STDEQSPRG---YGSNYQSMLEGYDEDATLIEEYSGNHHH 53

Query:    57 --VSEKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKT 114
               +SEKKRRL VDQVKALEKNFE+ENKLEPERK KLAQELGLQPRQVAVWFQNRRARWKT
Sbjct:    54 MGLSEKKRRLKVDQVKALEKNFELENKLEPERKTKLAQELGLQPRQVAVWFQNRRARWKT 113

Query:   115 KQLERDYGVLKANYDALKLNYDSLQHDNEALLKEIRELKSKLN-EENTESNISVKQ--EE 171
             KQLE+DYGVLK  YD+L+ N+DSL+ DN++LL+EI ++K+K+N EE+  +N ++ +  +E
Sbjct:   114 KQLEKDYGVLKGQYDSLRHNFDSLRRDNDSLLQEISKIKAKVNGEEDNNNNKAITEGVKE 173

Query:   172 TIVHETD 178
               VH+TD
Sbjct:   174 EEVHKTD 180

 Score = 122 (48.0 bits), Expect = 2.6e-57, Sum P(2) = 2.6e-57
 Identities = 26/42 (61%), Positives = 28/42 (66%)

Query:   303 QFVKMEE---HNFF--GDETCNFFSDEQPPSLPWY-CSDQWT 338
             QFVK E+   H  F  G+E C FFSDEQPPSL WY  SD WT
Sbjct:   253 QFVKTEQTEDHEDFLSGEEACGFFSDEQPPSLHWYSASDHWT 294


>TAIR|locus:2168225 [details] [associations]
            symbol:HB5 "homeobox protein 5" species:3702 "Arabidopsis
            thaliana" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
            "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA;ISS] [GO:0009787
            "regulation of abscisic acid mediated signaling pathway"
            evidence=NAS] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA;IDA] [GO:0042803 "protein homodimerization activity"
            evidence=IDA] [GO:0009737 "response to abscisic acid stimulus"
            evidence=IMP;IDA] [GO:0009738 "abscisic acid mediated signaling
            pathway" evidence=TAS] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=IDA] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045893 GO:GO:0042803
            GO:GO:0009738 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AB011479 GO:GO:0000976
            HOGENOM:HOG000006025 EMBL:X67033 EMBL:AF325054 EMBL:AY074293
            EMBL:AY091340 IPI:IPI00526581 PIR:S47135 RefSeq:NP_201334.1
            UniGene:At.19698 UniGene:At.67842 ProteinModelPortal:P46667
            SMR:P46667 STRING:P46667 EnsemblPlants:AT5G65310.1 GeneID:836656
            KEGG:ath:AT5G65310 GeneFarm:3988 TAIR:At5g65310 eggNOG:NOG325574
            InParanoid:P46667 OMA:PTSELAF PhylomeDB:P46667
            ProtClustDB:CLSN2686460 Genevestigator:P46667 Uniprot:P46667
        Length = 312

 Score = 456 (165.6 bits), Expect = 4.2e-53, Sum P(2) = 4.2e-53
 Identities = 106/186 (56%), Positives = 123/186 (66%)

Query:     1 MKRSLCSSDDSLGALMSICPATDEQ-SPRNNQV---------YSREFQTMXXXXXXXXXX 50
             MKRS  SSD   G L      TD+Q SPR             YS+ F  +          
Sbjct:     1 MKRSRGSSDSLSGFLPIRHSTTDKQISPRPTTTGFLYSGAGDYSQMFDALEDDGSLEDLG 60

Query:    51 XX--XXXHVSEKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNR 108
                      +EKKRRL V+QVKALEKNFE++NKLEPERKVKLAQELGLQPRQVA+WFQNR
Sbjct:    61 GVGHASSTAAEKKRRLGVEQVKALEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWFQNR 120

Query:   109 RARWKTKQLERDYGVLKANYDALKLNYDSLQHDNEALLKEIRELKSKLNEENT---ESNI 165
             RARWKTKQLERDYGVLK+N+DALK N DSLQ DN++LL +I+ELK+KLN E     E N 
Sbjct:   121 RARWKTKQLERDYGVLKSNFDALKRNRDSLQRDNDSLLGQIKELKAKLNVEGVKGIEENG 180

Query:   166 SVKQEE 171
             ++K  E
Sbjct:   181 ALKAVE 186

 Score = 111 (44.1 bits), Expect = 4.2e-53, Sum P(2) = 4.2e-53
 Identities = 21/38 (55%), Positives = 25/38 (65%)

Query:   302 TQFVKMEEHN--FFGDETCNFFSDEQPPSLPWYCSDQW 337
             +QFVKMEEH   F G+E C  F+D +     WYCSDQW
Sbjct:   277 SQFVKMEEHEDLFSGEEACKLFADNEQ----WYCSDQW 310


>TAIR|locus:2084228 [details] [associations]
            symbol:HB-1 "homeobox 1" species:3702 "Arabidopsis
            thaliana" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA;IDA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA;ISS]
            [GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
            of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA;IDA] [GO:0009637
            "response to blue light" evidence=IEP] [GO:0009651 "response to
            salt stress" evidence=IEP] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=IDA] [GO:0010167 "response
            to nitrate" evidence=RCA] [GO:0015706 "nitrate transport"
            evidence=RCA] [GO:0015996 "chlorophyll catabolic process"
            evidence=RCA] [GO:0042803 "protein homodimerization activity"
            evidence=IDA] [GO:0009965 "leaf morphogenesis" evidence=IMP]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
            PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893
            GO:GO:0042803 GO:GO:0009651 GO:GO:0043565 GO:GO:0003700
            GO:GO:0006351 GO:GO:0009637 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GO:GO:0009965 EMBL:AC009325 GO:GO:0000976 KO:K09338
            HOGENOM:HOG000006025 EMBL:X58821 EMBL:AY058188 EMBL:AY098972
            EMBL:M90416 IPI:IPI00536407 PIR:S16325 RefSeq:NP_186796.1
            UniGene:At.41275 UniGene:At.47815 ProteinModelPortal:Q02283
            SMR:Q02283 STRING:Q02283 EnsemblPlants:AT3G01470.1 GeneID:821138
            KEGG:ath:AT3G01470 GeneFarm:3968 TAIR:At3g01470 eggNOG:NOG245596
            InParanoid:Q02283 OMA:QVHLLEK PhylomeDB:Q02283
            ProtClustDB:CLSN2684999 Genevestigator:Q02283 GermOnline:AT3G01470
            Uniprot:Q02283
        Length = 272

 Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
 Identities = 69/106 (65%), Positives = 82/106 (77%)

Query:    59 EKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLE 118
             EKKRRL+ +QV  LEK+FE ENKLEPERK +LA++LGLQPRQVAVWFQNRRARWKTKQLE
Sbjct:    67 EKKRRLTTEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLE 126

Query:   119 RDYGVLKANYDALKLNYDSLQHDNEALLKEIRELKSKLNEENTESN 164
             RDY +LK+ YD L  NYDS+  DN+ L  E+  L  KL  +   +N
Sbjct:   127 RDYDLLKSTYDQLLSNYDSIVMDNDKLRSEVTSLTEKLQGKQETAN 172


>TAIR|locus:2205075 [details] [associations]
            symbol:ATHB13 species:3702 "Arabidopsis thaliana"
            [GO:0000976 "transcription regulatory region sequence-specific DNA
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
            evidence=ISM;IEA;ISS] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA;IDA] [GO:0009744 "response to sucrose
            stimulus" evidence=IMP] [GO:0009965 "leaf morphogenesis"
            evidence=IMP] [GO:0048826 "cotyledon morphogenesis" evidence=IMP]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
            PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009744
            GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GO:GO:0009965 GO:GO:0000976 KO:K09338 EMBL:AF208044
            EMBL:AC013289 EMBL:AY057572 EMBL:AY133645 EMBL:AY086888
            IPI:IPI00519626 PIR:H96719 RefSeq:NP_177136.1 UniGene:At.23736
            UniGene:At.68137 ProteinModelPortal:Q8LC03 SMR:Q8LC03 STRING:Q8LC03
            PaxDb:Q8LC03 PRIDE:Q8LC03 EnsemblPlants:AT1G69780.1 GeneID:843314
            KEGG:ath:AT1G69780 GeneFarm:3958 TAIR:At1g69780 eggNOG:NOG250192
            HOGENOM:HOG000006025 InParanoid:Q8LC03 OMA:NPILPSC PhylomeDB:Q8LC03
            ProtClustDB:CLSN2682576 Genevestigator:Q8LC03 GO:GO:0048826
            Uniprot:Q8LC03
        Length = 294

 Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
 Identities = 72/126 (57%), Positives = 93/126 (73%)

Query:    57 VSEKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQ 116
             + EKKRRL+++QVK LEKNFE+ NKLEPERK++LA+ LGLQPRQ+A+WFQNRRARWKTKQ
Sbjct:    82 MGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQ 141

Query:   117 LERDYGVLKANYDALKLNYDSLQHDNEALLKEIRELKSKLNEENTES-NISVKQEETIVH 175
             LE+DY  LK  +D LK   D LQ  N+ L  EI  LK   N E TES N++ + E +  +
Sbjct:   142 LEKDYDTLKRQFDTLKAENDLLQTHNQKLQAEIMGLK---NREQTESINLNKETEGSCSN 198

Query:   176 ETDHQN 181
              +D+ +
Sbjct:   199 RSDNSS 204


>TAIR|locus:2102107 [details] [associations]
            symbol:HB20 "homeobox protein 20" species:3702
            "Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA;ISS]
            [GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
            of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0009733 "response
            to auxin stimulus" evidence=IEP] [GO:0000041 "transition metal ion
            transport" evidence=RCA] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 KO:K09338
            HOGENOM:HOG000006025 EMBL:AC008261 EMBL:AK228890 EMBL:BT029221
            EMBL:AY087631 IPI:IPI00546192 RefSeq:NP_186771.1 UniGene:At.41313
            HSSP:P14859 ProteinModelPortal:Q8LAT0 SMR:Q8LAT0 IntAct:Q8LAT0
            PaxDb:Q8LAT0 PRIDE:Q8LAT0 EnsemblPlants:AT3G01220.1 GeneID:821232
            KEGG:ath:AT3G01220 GeneFarm:3967 TAIR:At3g01220 eggNOG:NOG328135
            InParanoid:Q8LAT0 OMA:SDINLEM PhylomeDB:Q8LAT0
            ProtClustDB:CLSN2684985 Genevestigator:Q8LAT0 Uniprot:Q8LAT0
        Length = 286

 Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
 Identities = 68/114 (59%), Positives = 89/114 (78%)

Query:    57 VSEKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQ 116
             + EKK+RL ++QVKALEK+FE+ NKLEPERK++LA+ LG+QPRQ+A+WFQNRRARWKT+Q
Sbjct:    84 LGEKKKRLQLEQVKALEKSFELGNKLEPERKIQLAKALGMQPRQIAIWFQNRRARWKTRQ 143

Query:   117 LERDYGVLKANYDALKLNYDSLQHDNEALLKEIRELKSKLNEENTESNISVKQE 170
             LERDY  LK  +++LK +  SL   N+ LL E+  LK   N+E  E NI VK+E
Sbjct:   144 LERDYDSLKKQFESLKSDNASLLAYNKKLLAEVMALK---NKECNEGNI-VKRE 193


>TAIR|locus:2150901 [details] [associations]
            symbol:HB-3 "homeobox 3" species:3702 "Arabidopsis
            thaliana" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA;ISS]
            [GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
            of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA;IDA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
            PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0043565
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GO:GO:0000976 KO:K09338 HOGENOM:HOG000006025
            ProtClustDB:CLSN2684985 EMBL:AL353993 EMBL:X62644 EMBL:AK229364
            EMBL:U09340 IPI:IPI00541406 IPI:IPI00570430 PIR:S20930 PIR:T49950
            PIR:T52370 RefSeq:NP_568309.2 UniGene:At.49022
            ProteinModelPortal:Q00466 SMR:Q00466 EnsemblPlants:AT5G15150.1
            GeneID:831367 KEGG:ath:AT5G15150 GeneFarm:3985 TAIR:At5g15150
            eggNOG:NOG322183 InParanoid:Q00466 OMA:EERNNIN PhylomeDB:Q00466
            Genevestigator:Q00466 GermOnline:AT5G15150 Uniprot:Q00466
        Length = 314

 Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
 Identities = 63/106 (59%), Positives = 83/106 (78%)

Query:    57 VSEKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQ 116
             + EKK+RL+++QV+ALEK+FE+ NKLEPERK++LA+ LGLQPRQ+A+WFQNRRARWKTKQ
Sbjct:   112 LGEKKKRLNLEQVRALEKSFELGNKLEPERKMQLAKALGLQPRQIAIWFQNRRARWKTKQ 171

Query:   117 LERDYGVLKANYDALKLNYDSLQHDNEALLKEIRELKSKLNEENTE 162
             LERDY  LK  +D LK + DSL   N+ L  E+  LK    +E+ +
Sbjct:   172 LERDYDSLKKQFDVLKSDNDSLLAHNKKLHAELVALKKHDRKESAK 217


>TAIR|locus:2062754 [details] [associations]
            symbol:HB-7 "homeobox 7" species:3702 "Arabidopsis
            thaliana" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA;ISS] [GO:0005634
            "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=IDA]
            [GO:0009409 "response to cold" evidence=RCA] [GO:0009414 "response
            to water deprivation" evidence=IEP;RCA] [GO:0009737 "response to
            abscisic acid stimulus" evidence=IEP;RCA] [GO:0009738 "abscisic
            acid mediated signaling pathway" evidence=IGI;RCA] [GO:0042538
            "hyperosmotic salinity response" evidence=RCA] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0045893 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009738
            GO:GO:0009414 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG252905 HOGENOM:HOG000006310
            ProtClustDB:CLSN2683559 EMBL:X67032 EMBL:AC005819 EMBL:AY045826
            EMBL:AY091364 IPI:IPI00544746 PIR:H84905 PIR:S47137
            RefSeq:NP_182191.1 UniGene:At.136 ProteinModelPortal:P46897
            SMR:P46897 STRING:P46897 EnsemblPlants:AT2G46680.1 GeneID:819280
            KEGG:ath:AT2G46680 GeneFarm:3966 TAIR:At2g46680 InParanoid:P46897
            OMA:THHESEN PhylomeDB:P46897 Genevestigator:P46897 Uniprot:P46897
        Length = 258

 Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
 Identities = 59/140 (42%), Positives = 94/140 (67%)

Query:    56 HVSEKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTK 115
             H    +RR S +Q+K+LE  FE E +LEP +KV+LA+ELGLQPRQVA+WFQN+RARWK+K
Sbjct:    28 HNKNNQRRFSDEQIKSLEMMFESETRLEPRKKVQLARELGLQPRQVAIWFQNKRARWKSK 87

Query:   116 QLERDYGVLKANYDALKLNYDSLQHDNEALLKEIRELKSKLNEENTESNISVKQEETIV- 174
             QLE +Y +L+ NYD L   ++SL+ + +AL+ E++ LK    ++  E       ++ +V 
Sbjct:    88 QLETEYNILRQNYDNLASQFESLKKEKQALVSELQRLKEATQKKTQEEERQCSGDQAVVA 147

Query:   175 -HETDHQNKATLDRDQESDD 193
                T H+++   +R ++ ++
Sbjct:   148 LSSTHHESENEENRRRKPEE 167


>TAIR|locus:2202795 [details] [associations]
            symbol:AtHB23 "homeobox protein 23" species:3702
            "Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA;ISS]
            [GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
            of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0009739 "response
            to gibberellin stimulus" evidence=IEP] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 GO:GO:0000976
            KO:K09338 HOGENOM:HOG000006025 EMBL:AC005508 EMBL:BT009727
            EMBL:AK228056 EMBL:AY084913 IPI:IPI00532646 PIR:F86396
            RefSeq:NP_564268.1 UniGene:At.43561 ProteinModelPortal:Q8LFD3
            SMR:Q8LFD3 STRING:Q8LFD3 PRIDE:Q8LFD3 EnsemblPlants:AT1G26960.1
            GeneID:839587 KEGG:ath:AT1G26960 GeneFarm:3956 TAIR:At1g26960
            eggNOG:NOG257807 InParanoid:Q8LFD3 OMA:LAFFPEN PhylomeDB:Q8LFD3
            ProtClustDB:CLSN2917066 Genevestigator:Q8LFD3 GermOnline:AT1G26960
            Uniprot:Q8LFD3
        Length = 255

 Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
 Identities = 63/121 (52%), Positives = 90/121 (74%)

Query:    57 VSEKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQ 116
             + EKKRRL+++Q+KALEK+FE+ NKLE +RK++LA+ LGLQPRQ+A+WFQNRRAR KTKQ
Sbjct:    68 MGEKKRRLNMEQLKALEKDFELGNKLESDRKLELARALGLQPRQIAIWFQNRRARSKTKQ 127

Query:   117 LERDYGVLKANYDALKLNYDSLQHDNEALLKEIRELKSK-------LNEENTESNISVKQ 169
             LE+DY +LK  +++L+   + LQ  N+ L  ++  LKS+       LN+E TE + S + 
Sbjct:   128 LEKDYDMLKRQFESLRDENEVLQTQNQKLQAQVMALKSREPIESINLNKE-TEGSCSDRS 186

Query:   170 E 170
             E
Sbjct:   187 E 187


>TAIR|locus:2079542 [details] [associations]
            symbol:HB-12 "homeobox 12" species:3702 "Arabidopsis
            thaliana" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA;ISS] [GO:0005634
            "nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0009651 "response
            to salt stress" evidence=IGI;RCA] [GO:0009737 "response to abscisic
            acid stimulus" evidence=IEP;RCA;IMP] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=IDA]
            [GO:0009414 "response to water deprivation" evidence=IEP]
            [GO:0009615 "response to virus" evidence=IEP] [GO:0006970 "response
            to osmotic stress" evidence=IEP] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
            GO:GO:0009737 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
            GO:GO:0045893 GO:GO:0009651 GO:GO:0009414 GO:GO:0003700
            GO:GO:0006351 GO:GO:0009615 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GO:GO:0000976 EMBL:AF001949 EMBL:AL138642 EMBL:AY059828
            EMBL:BT002206 EMBL:AY087187 IPI:IPI00522302 PIR:T47981 PIR:T51751
            RefSeq:NP_191748.1 UniGene:At.25517 HSSP:P02836
            ProteinModelPortal:Q9M276 SMR:Q9M276 STRING:Q9M276
            EnsemblPlants:AT3G61890.1 GeneID:825362 KEGG:ath:AT3G61890
            GeneFarm:3970 TAIR:At3g61890 eggNOG:NOG252905 HOGENOM:HOG000006310
            InParanoid:Q9M276 KO:K09338 OMA:HELMNIV PhylomeDB:Q9M276
            ProtClustDB:CLSN2683559 Genevestigator:Q9M276 GermOnline:AT3G61890
            Uniprot:Q9M276
        Length = 235

 Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
 Identities = 50/107 (46%), Positives = 79/107 (73%)

Query:    58 SEKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQL 117
             S  ++R S +Q+K+LE  FE E +LEP +KV++A+ELGLQPRQVA+WFQN+RARWKTKQL
Sbjct:    28 SNNQKRFSEEQIKSLELIFESETRLEPRKKVQVARELGLQPRQVAIWFQNKRARWKTKQL 87

Query:   118 ERDYGVLKANYDALKLNYDSLQHDNEALLKEIRELKSKLNEENTESN 164
             E++Y  L+ANY+ L   ++ ++ + ++L+ E++ L  ++     E +
Sbjct:    88 EKEYNTLRANYNNLASQFEIMKKEKQSLVSELQRLNEEMQRPKEEKH 134


>TAIR|locus:2144578 [details] [associations]
            symbol:HB51 "homeobox 51" species:3702 "Arabidopsis
            thaliana" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA;ISS] [GO:0005634
            "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA;IDA] [GO:0009965 "leaf
            morphogenesis" evidence=IMP] [GO:0010434 "bract formation"
            evidence=IGI] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=IGI] [GO:0048510 "regulation of timing of
            transition from vegetative to reproductive phase" evidence=IGI]
            [GO:0010582 "floral meristem determinacy" evidence=IGI] [GO:0048443
            "stamen development" evidence=RCA] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
            GO:GO:0045893 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
            EMBL:AB005235 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009965
            GO:GO:0048510 GO:GO:0010582 GO:GO:0000976 HOGENOM:HOG000006025
            EMBL:AL162506 IPI:IPI00533817 IPI:IPI01019585 PIR:T48406
            RefSeq:NP_195999.2 UniGene:At.54712 ProteinModelPortal:Q9LZR0
            SMR:Q9LZR0 GeneID:831723 KEGG:ath:AT5G03790 GeneFarm:3983
            TAIR:At5g03790 eggNOG:KOG0483 InParanoid:Q9LZR0 OMA:AHPRTEN
            ArrayExpress:Q9LZR0 Genevestigator:Q9LZR0 GermOnline:AT5G03790
            GO:GO:0010434 Uniprot:Q9LZR0
        Length = 235

 Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
 Identities = 53/115 (46%), Positives = 75/115 (65%)

Query:    60 KKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLER 119
             KK+RL+  Q+ +LE++F+ E KL+ +RKVKL++ELGLQPRQ+AVWFQNRRARWK KQLE+
Sbjct:    77 KKKRLTSGQLASLERSFQEEIKLDSDRKVKLSRELGLQPRQIAVWFQNRRARWKAKQLEQ 136

Query:   120 DYGVLKANYDALKLNYDSLQHDNEALLKEIRELKSKLNEENTESNISVKQEETIV 174
              Y  L+  YD +      L HD    L+ +   +  + ++ +   I V  EE  V
Sbjct:   137 LYDSLRQEYDVVSREKQML-HDEVKKLRALLRDQGLIKKQISAGTIKVSGEEDTV 190


>TAIR|locus:2046263 [details] [associations]
            symbol:HB21 "homeobox protein 21" species:3702
            "Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA;ISS] [GO:0005634
            "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
            GO:GO:0006950 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GO:GO:0000976 KO:K09338 HSSP:P01366 EMBL:AC006135
            EMBL:BT031362 IPI:IPI00520845 PIR:F84565 RefSeq:NP_179445.1
            UniGene:At.52810 ProteinModelPortal:Q9ZU70 SMR:Q9ZU70
            EnsemblPlants:AT2G18550.1 GeneID:816370 KEGG:ath:AT2G18550
            GeneFarm:3961 TAIR:At2g18550 eggNOG:NOG270330 HOGENOM:HOG000034122
            InParanoid:Q9ZU70 OMA:RVEDEYT PhylomeDB:Q9ZU70
            ProtClustDB:CLSN2683051 ArrayExpress:Q9ZU70 Genevestigator:Q9ZU70
            GermOnline:AT2G18550 Uniprot:Q9ZU70
        Length = 220

 Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
 Identities = 63/141 (44%), Positives = 83/141 (58%)

Query:    60 KKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLER 119
             +KR+LS +QV+ LE +FE ++KLE ERK +LA ELGL PRQVAVWFQNRRARWK K++E 
Sbjct:    61 RKRKLSDEQVRMLEISFEDDHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKRVED 120

Query:   120 DYGVLKANYDAL---KLNYDS-LQHDNEALLKEIRELKSKLNE-ENTESNISVKQEETIV 174
             +Y  LK  Y+     K   DS + H  E L +  RE++      E T SN  +    TI 
Sbjct:   121 EYTKLKNAYETTVVEKCRLDSEVIHLKEQLYEAEREIQRLAKRVEGTLSNSPISSSVTIE 180

Query:   175 --HETDHQNKATLDRDQESDD 193
               H T       +  D E+D+
Sbjct:   181 ANHTTPFFGDYDIGFDGEADE 201


>TAIR|locus:2173669 [details] [associations]
            symbol:HB53 "homeobox 53" species:3702 "Arabidopsis
            thaliana" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA;ISS] [GO:0005634
            "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0009733 "response
            to auxin stimulus" evidence=IEP] [GO:0048364 "root development"
            evidence=TAS] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009733 GO:GO:0006950
            GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0048364
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG250192
            HSSP:P01366 HOGENOM:HOG000034122 ProtClustDB:CLSN2683051
            EMBL:AY683477 EMBL:AB018119 EMBL:BT024847 IPI:IPI00532925
            RefSeq:NP_201471.1 UniGene:At.51263 ProteinModelPortal:Q9LVR0
            SMR:Q9LVR0 PRIDE:Q9LVR0 EnsemblPlants:AT5G66700.1 GeneID:836803
            KEGG:ath:AT5G66700 GeneFarm:3989 TAIR:At5g66700 InParanoid:Q9LVR0
            OMA:ELAPETN PhylomeDB:Q9LVR0 Genevestigator:Q9LVR0
            GermOnline:AT5G66700 Uniprot:Q9LVR0
        Length = 228

 Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
 Identities = 59/128 (46%), Positives = 77/128 (60%)

Query:    60 KKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLER 119
             +KR+L+ +QV  LE +F  E+KLE  RK K+A ELGL PRQVAVWFQNRRARWK K+LE 
Sbjct:    71 RKRKLTDEQVNMLEYSFGNEHKLESGRKEKIAGELGLDPRQVAVWFQNRRARWKNKKLEE 130

Query:   120 DYGVLKANYDALKLNYDSLQHD----NEALLK---EIRELKSKLNEENTESNISVKQEET 172
             +Y  LK ++D + L    L+       E L +   EIR+L  +L E  T S+ S    E 
Sbjct:   131 EYAKLKNHHDNVVLGQCQLESQILKLTEQLSEAQSEIRKLSERLEEMPTNSSSSSLSVEA 190

Query:   173 IVHETDHQ 180
                 TD +
Sbjct:   191 NNAPTDFE 198


>TAIR|locus:2040520 [details] [associations]
            symbol:HB22 "homeobox protein 22" species:3702
            "Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA;ISS] [GO:0005634
            "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
            GO:GO:0003700 GO:GO:0006351 EMBL:AC006919 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GO:GO:0000976 KO:K09338 HOGENOM:HOG000006025
            EMBL:AC006282 EMBL:DQ056569 IPI:IPI00527137 PIR:E84782
            RefSeq:NP_850266.1 UniGene:At.53052 ProteinModelPortal:Q4PSR7
            SMR:Q4PSR7 EnsemblPlants:AT2G36610.1 GeneID:818233
            KEGG:ath:AT2G36610 GeneFarm:3964 TAIR:At2g36610 eggNOG:NOG297545
            InParanoid:Q4PSR7 OMA:MEYWSSS PhylomeDB:Q4PSR7
            ProtClustDB:CLSN2918190 Genevestigator:Q4PSR7 GermOnline:AT2G36610
            Uniprot:Q4PSR7
        Length = 185

 Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
 Identities = 49/111 (44%), Positives = 78/111 (70%)

Query:    59 EKKRRLSVDQVKALEKNFEVE---N-----KLEPERKVKLAQELGLQPRQVAVWFQNRRA 110
             +KK++++ +Q+K LE++F+ E   N     KL P+RK+KL++ELGLQPRQ+AVWFQNR+A
Sbjct:    70 KKKKKMTSEQLKFLERSFQEEIKLNPDRKMKLNPDRKMKLSKELGLQPRQIAVWFQNRKA 129

Query:   111 RWKTKQLERDYGVLKANYDALKLNYDSLQHDNEALLKEIRELKSKLNEENT 161
             RWK KQLE         Y++L+  +D +  + E L +E+ +LKS + E+++
Sbjct:   130 RWKNKQLEH-------LYESLRQEFDIVSREKELLQEELIQLKSMIREDSS 173


>TAIR|locus:2115215 [details] [associations]
            symbol:HB40 "homeobox protein 40" species:3702
            "Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA;ISS] [GO:0005634
            "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0009733 "response
            to auxin stimulus" evidence=IEP] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
            GO:GO:0009733 GO:GO:0006950 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AL161589 GO:GO:0000976
            KO:K09338 HSSP:P10037 HOGENOM:HOG000034122 EMBL:Z99708
            EMBL:BX827896 IPI:IPI00520900 PIR:H85433 RefSeq:NP_195392.2
            UniGene:At.50404 ProteinModelPortal:O23208 SMR:O23208 PRIDE:O23208
            EnsemblPlants:AT4G36740.1 GeneID:829827 KEGG:ath:AT4G36740
            GeneFarm:3980 TAIR:At4g36740 eggNOG:NOG244411 InParanoid:O23208
            OMA:NSYIDEA PhylomeDB:O23208 Genevestigator:O23208 Uniprot:O23208
        Length = 216

 Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
 Identities = 56/124 (45%), Positives = 80/124 (64%)

Query:    60 KKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLER 119
             +KR+L+ +QV  LE +F  E+KLE ERK +LA ELGL PRQVAVWFQNRRARWK K+LE 
Sbjct:    55 RKRKLTDEQVNMLEMSFGDEHKLESERKDRLAAELGLDPRQVAVWFQNRRARWKNKRLEE 114

Query:   120 DYGVLKANYDALKLNYDSLQHD----NEALL---KEIRELKSKLN--EENT--ESNISVK 168
             +Y  LK ++D + ++   L+ +     E L    +EI+ L  ++     N+   S++SV+
Sbjct:   115 EYNKLKNSHDNVVVDKCRLESEVIQLKEQLYDAEREIQRLAERVEGGSSNSPISSSVSVE 174

Query:   169 QEET 172
               ET
Sbjct:   175 ANET 178


>TAIR|locus:2154724 [details] [associations]
            symbol:HB52 "homeobox protein 52" species:3702
            "Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA;ISS] [GO:0005634
            "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0009637 "response
            to blue light" evidence=IEP] [GO:0009646 "response to absence of
            light" evidence=IEP] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
            GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0009637
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009646 EMBL:AB007644
            EMBL:BT015927 EMBL:BT021920 EMBL:AK229211 IPI:IPI00520413
            RefSeq:NP_200209.1 UniGene:At.29523 ProteinModelPortal:Q9FN29
            SMR:Q9FN29 EnsemblPlants:AT5G53980.1 GeneID:835481
            KEGG:ath:AT5G53980 GeneFarm:3987 TAIR:At5g53980 eggNOG:NOG240187
            HOGENOM:HOG000029156 InParanoid:Q9FN29 OMA:DELYACF PhylomeDB:Q9FN29
            ProtClustDB:CLSN2916425 Genevestigator:Q9FN29 GermOnline:AT5G53980
            Uniprot:Q9FN29
        Length = 156

 Score = 217 (81.4 bits), Expect = 7.5e-18, P = 7.5e-18
 Identities = 43/97 (44%), Positives = 68/97 (70%)

Query:    60 KKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLER 119
             KK+RL+ DQV+ LEK F +  KLEP+ K++L+ +LGL  RQVAVWFQN+RAR+KT+ LE 
Sbjct:    11 KKKRLTQDQVRQLEKCFTMNKKLEPDLKLQLSNQLGLPQRQVAVWFQNKRARFKTQSLEV 70

Query:   120 DYGVLKANYDALKLNYDSLQHDNEALLKEIRELKSKL 156
              +  L++ ++A   +   L+H  + L  E++  +++L
Sbjct:    71 QHCTLQSKHEAALSDKAKLEHQVQFLQDELKRARNQL 107


>TAIR|locus:2170194 [details] [associations]
            symbol:HAT14 "homeobox from Arabidopsis thaliana"
            species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
            evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA;ISS] [GO:0005634
            "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
            InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00340 SMART:SM00389 GO:GO:0005634 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
            EMBL:AP002032 EMBL:AJ431182 EMBL:BT005879 EMBL:AK227423 EMBL:U09334
            IPI:IPI00522942 IPI:IPI00547278 PIR:T52367 RefSeq:NP_196289.2
            RefSeq:NP_974743.1 UniGene:At.357 ProteinModelPortal:P46665
            SMR:P46665 IntAct:P46665 PaxDb:P46665 PRIDE:P46665
            EnsemblPlants:AT5G06710.1 GeneID:830560 KEGG:ath:AT5G06710
            GeneFarm:3984 TAIR:At5g06710 eggNOG:NOG310615 InParanoid:P46665
            OMA:KTSTPFY PhylomeDB:P46665 ProtClustDB:CLSN2917817
            Genevestigator:P46665 Uniprot:P46665
        Length = 336

 Score = 196 (74.1 bits), Expect = 3.7e-14, P = 3.7e-14
 Identities = 46/97 (47%), Positives = 62/97 (63%)

Query:    58 SEKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQL 117
             + KK RLS DQ   LE +F+  + L P++K+ LA++L L+PRQV VWFQNRRAR K KQ 
Sbjct:   188 TRKKLRLSKDQSAFLEDSFKEHSTLNPKQKIALAKQLNLRPRQVEVWFQNRRARTKLKQT 247

Query:   118 ERDYGVLKANYDALKLNYDSLQHDNEALLKEIRELKS 154
             E D       Y  LK   +SL  +N  L KE++EL++
Sbjct:   248 EVD-----CEY--LKRCCESLTEENRRLQKEVKELRT 277


>TAIR|locus:2055028 [details] [associations]
            symbol:HB4 "homeobox-leucine zipper protein 4"
            species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
            evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA;ISS] [GO:0005634
            "nucleus" evidence=ISM;IEA;ISS] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA;ISS;IMP] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0009641 "shade
            avoidance" evidence=IEP] [GO:0009725 "response to hormone stimulus"
            evidence=IMP] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0010218
            "response to far red light" evidence=IEP] InterPro:IPR001356
            InterPro:IPR003106 InterPro:IPR006712 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 Pfam:PF04618
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
            GO:GO:0009506 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
            GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0010218
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009725 EMBL:AC002388
            KO:K09338 HOGENOM:HOG000241612 EMBL:Y09582 EMBL:AJ441251
            IPI:IPI00540244 PIR:T00402 RefSeq:NP_182018.1 UniGene:At.44957
            ProteinModelPortal:P92953 SMR:P92953 PaxDb:P92953 PRIDE:P92953
            EnsemblPlants:AT2G44910.1 GeneID:819100 KEGG:ath:AT2G44910
            GeneFarm:3965 TAIR:At2g44910 eggNOG:NOG279137 InParanoid:P92953
            OMA:RGGDENE PhylomeDB:P92953 ProtClustDB:CLSN2683322
            ArrayExpress:P92953 Genevestigator:P92953 GermOnline:AT2G44910
            GO:GO:0009641 Uniprot:P92953
        Length = 318

 Score = 192 (72.6 bits), Expect = 1.1e-13, P = 1.1e-13
 Identities = 48/101 (47%), Positives = 63/101 (62%)

Query:    58 SEKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQL 117
             S KK RLS DQ   LE+ F+  + L P++K+ LA++L L+ RQV VWFQNRRAR K KQ 
Sbjct:   161 SRKKLRLSKDQALVLEETFKEHSTLNPKQKLALAKQLNLRARQVEVWFQNRRARTKLKQT 220

Query:   118 ERDYGVLKANYDALKLNYDSLQHDNEALLKEIRELKS-KLN 157
             E D       Y  LK   D+L  +N  L KE+ EL++ KL+
Sbjct:   221 EVD-----CEY--LKRCCDNLTEENRRLQKEVSELRALKLS 254


>TAIR|locus:2137599 [details] [associations]
            symbol:HAT22 species:3702 "Arabidopsis thaliana"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0009735 "response to cytokinin stimulus"
            evidence=IEP] [GO:0006473 "protein acetylation" evidence=RCA]
            InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00340 SMART:SM00389 GO:GO:0005634
            EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009735 EMBL:AL035709
            EMBL:AL161592 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
            EMBL:U09336 EMBL:U09337 EMBL:AJ441254 EMBL:BT002318 EMBL:AY087563
            EMBL:M90417 IPI:IPI00522748 PIR:T06026 RefSeq:NP_195493.1
            UniGene:At.23912 ProteinModelPortal:P46604 SMR:P46604 IntAct:P46604
            EnsemblPlants:AT4G37790.1 GeneID:829935 KEGG:ath:AT4G37790
            GeneFarm:3981 TAIR:At4g37790 eggNOG:NOG259949 InParanoid:P46604
            OMA:TTERVVC PhylomeDB:P46604 ProtClustDB:CLSN2683864
            Genevestigator:P46604 GermOnline:AT4G37790 Uniprot:P46604
        Length = 278

 Score = 186 (70.5 bits), Expect = 2.9e-13, P = 2.9e-13
 Identities = 45/102 (44%), Positives = 65/102 (63%)

Query:    58 SEKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQL 117
             + KK RL+  Q   LE NF++ + L P++K  LA++L L+PRQV VWFQNRRAR K KQ 
Sbjct:   124 ARKKLRLTKQQSALLEDNFKLHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQT 183

Query:   118 ERDYGVLKANYDALKLNYDSLQHDNEALLKEIRELKS-KLNE 158
             E D        + LK   ++L  +N  L KE+++LK+ KL++
Sbjct:   184 EVDC-------EFLKKCCETLTDENRRLQKELQDLKALKLSQ 218


>TAIR|locus:2129061 [details] [associations]
            symbol:HAT1 species:3702 "Arabidopsis thaliana"
            [GO:0000976 "transcription regulatory region sequence-specific DNA
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
            evidence=ISM;IEA;ISS;IDA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003006
            "developmental process involved in reproduction" evidence=IGI]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0010582 "floral
            meristem determinacy" evidence=IGI] [GO:0043621 "protein
            self-association" evidence=IPI] [GO:0048467 "gynoecium development"
            evidence=IGI] [GO:0048507 "meristem development" evidence=IGI]
            [GO:0080127 "fruit septum development" evidence=IGI]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
            InterPro:IPR006712 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 Pfam:PF02183 Pfam:PF04618 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
            GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010582
            EMBL:Z97343 GO:GO:0000976 KO:K09338 HOGENOM:HOG000241612
            eggNOG:KOG0483 EMBL:AL161546 EMBL:U09332 EMBL:U09333 EMBL:AJ441252
            EMBL:BT005756 EMBL:BT006112 EMBL:AY087322 EMBL:AK228587
            IPI:IPI00538010 PIR:B71444 RefSeq:NP_193476.1 UniGene:At.19738
            ProteinModelPortal:P46600 SMR:P46600 EnsemblPlants:AT4G17460.1
            GeneID:827457 KEGG:ath:AT4G17460 GeneFarm:3979 TAIR:At4g17460
            InParanoid:P46600 OMA:LMCPSCE PhylomeDB:P46600
            ProtClustDB:CLSN2685891 Genevestigator:P46600 GermOnline:AT4G17460
            GO:GO:0080127 GO:GO:0048467 Uniprot:P46600
        Length = 282

 Score = 184 (69.8 bits), Expect = 6.7e-13, P = 6.7e-13
 Identities = 48/99 (48%), Positives = 59/99 (59%)

Query:    60 KKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLER 119
             KK RLS DQ   LE  F+  N L P++K+ LA++LGL  RQV VWFQNRRAR K KQ E 
Sbjct:   135 KKLRLSKDQSAVLEDTFKEHNTLNPKQKLALAKKLGLTARQVEVWFQNRRARTKLKQTEV 194

Query:   120 DYGVLKANYDALKLNYDSLQHDNEALLKEIRELKS-KLN 157
             D       Y  LK   + L  +N  L KE  EL++ KL+
Sbjct:   195 D-----CEY--LKRCVEKLTEENRRLEKEAAELRALKLS 226


>TAIR|locus:2171489 [details] [associations]
            symbol:HAT2 species:3702 "Arabidopsis thaliana"
            [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0009733 "response to auxin stimulus"
            evidence=RCA;IMP] [GO:0009734 "auxin mediated signaling pathway"
            evidence=IEP] [GO:0009826 "unidimensional cell growth"
            evidence=IMP] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=IMP] [GO:0009641 "shade avoidance"
            evidence=IEP] InterPro:IPR001356 InterPro:IPR003106
            InterPro:IPR006712 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 Pfam:PF02183 Pfam:PF04618 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00340 SMART:SM00389 GO:GO:0005634
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045892 GO:GO:0009734
            GO:GO:0003677 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009826 KO:K09338
            HOGENOM:HOG000241612 GO:GO:0009641 EMBL:AB018117
            ProtClustDB:CLSN2685891 EMBL:AB067629 EMBL:AJ431183 EMBL:AF428450
            EMBL:AY052324 EMBL:AY061904 EMBL:U09335 IPI:IPI00526064 PIR:T52368
            RefSeq:NP_199548.1 UniGene:At.25127 ProteinModelPortal:P46601
            SMR:P46601 IntAct:P46601 STRING:P46601 EnsemblPlants:AT5G47370.1
            GeneID:834784 KEGG:ath:AT5G47370 GeneFarm:3986 TAIR:At5g47370
            eggNOG:NOG256142 InParanoid:P46601 OMA:IPINPWA PhylomeDB:P46601
            Genevestigator:P46601 GermOnline:AT5G47370 Uniprot:P46601
        Length = 283

 Score = 184 (69.8 bits), Expect = 7.0e-13, P = 7.0e-13
 Identities = 48/103 (46%), Positives = 61/103 (59%)

Query:    58 SEKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQL 117
             S KK RLS DQ   LE+ F+  N L P++K+ LA++L L  RQV VWFQNRRAR K KQ 
Sbjct:   128 SRKKLRLSKDQSAFLEETFKEHNTLNPKQKLALAKKLNLTARQVEVWFQNRRARTKLKQT 187

Query:   118 ERDYGVLKANYDALKLNYDSLQHDNEALLKEIRELKS-KLNEE 159
             E D       Y  LK   + L  +N  L KE  EL++ KL+ +
Sbjct:   188 EVD-----CEY--LKRCVEKLTEENRRLQKEAMELRTLKLSPQ 223


>TAIR|locus:2129136 [details] [associations]
            symbol:HB-2 "homeobox protein 2" species:3702
            "Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA;ISS]
            [GO:0005634 "nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA;ISS]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
            [GO:0008283 "cell proliferation" evidence=IMP] [GO:0009733
            "response to auxin stimulus" evidence=IMP] [GO:0009826
            "unidimensional cell growth" evidence=IMP] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=IDA]
            [GO:0048364 "root development" evidence=IMP] [GO:0009735 "response
            to cytokinin stimulus" evidence=IEP] [GO:0009641 "shade avoidance"
            evidence=IEP] [GO:0010017 "red or far-red light signaling pathway"
            evidence=IEP] [GO:0010218 "response to far red light" evidence=IEP]
            [GO:0042803 "protein homodimerization activity" evidence=IDA]
            [GO:0010016 "shoot system morphogenesis" evidence=IMP]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
            InterPro:IPR006712 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 Pfam:PF02183 Pfam:PF04618 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
            GO:GO:0005634 GO:GO:0045892 GO:GO:0042803 EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0009735 GO:GO:0009733 GO:GO:0008283
            GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0010218
            GO:GO:0048364 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009826
            EMBL:AL161544 GO:GO:0009585 GO:GO:0000976 GO:GO:0010017 KO:K09338
            GO:GO:0009641 EMBL:Z97342 EMBL:M90394 EMBL:Z19602 EMBL:X68145
            EMBL:X68146 EMBL:AF375453 EMBL:AY081747 EMBL:EF193551 EMBL:EF193552
            EMBL:EF193553 EMBL:EF193554 EMBL:EF193555 EMBL:EF193556
            EMBL:EF193557 EMBL:EF193558 EMBL:EF193559 EMBL:EF193560
            EMBL:EF193561 EMBL:EF193562 EMBL:EF193563 EMBL:EF193564
            EMBL:EF193565 EMBL:AY174653 EMBL:AY174654 EMBL:AY174655
            EMBL:AY174656 IPI:IPI00517186 PIR:S31424 RefSeq:NP_193411.1
            UniGene:At.24419 UniGene:At.74809 ProteinModelPortal:Q05466
            SMR:Q05466 IntAct:Q05466 STRING:Q05466 EnsemblPlants:AT4G16780.1
            GeneID:827384 KEGG:ath:AT4G16780 GeneFarm:3977 TAIR:At4g16780
            eggNOG:NOG150160 InParanoid:Q05466 OMA:EDGDNSR PhylomeDB:Q05466
            ProtClustDB:CLSN2685845 Genevestigator:Q05466 GermOnline:AT4G16780
            GO:GO:0010016 Uniprot:Q05466
        Length = 284

 Score = 184 (69.8 bits), Expect = 7.2e-13, P = 7.2e-13
 Identities = 46/103 (44%), Positives = 64/103 (62%)

Query:    58 SEKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQL 117
             S KK RLS DQ   LE+ F+  + L P++K  LA++LGL+ RQV VWFQNRRAR K KQ 
Sbjct:   127 SRKKLRLSKDQSAILEETFKDHSTLNPKQKQALAKQLGLRARQVEVWFQNRRARTKLKQT 186

Query:   118 ERDYGVLKANYDALKLNYDSLQHDNEALLKEIRELKS-KLNEE 159
             E D        + L+   ++L  +N  L KE+ EL++ KL+ +
Sbjct:   187 EVDC-------EFLRRCCENLTEENRRLQKEVTELRALKLSPQ 222


>TAIR|locus:2103396 [details] [associations]
            symbol:HAT3 "homeobox-leucine zipper protein 3"
            species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA;ISS] [GO:0005634
            "nucleus" evidence=ISM;IEA;ISS] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
            InterPro:IPR003106 InterPro:IPR006712 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 Pfam:PF04618
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
            GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0043565
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
            EMBL:AL138646 KO:K09338 HOGENOM:HOG000241612
            ProtClustDB:CLSN2683322 EMBL:U09338 EMBL:U09339 EMBL:AJ440781
            EMBL:AY099565 EMBL:BT008713 IPI:IPI00525230 PIR:T47850 PIR:T52350
            RefSeq:NP_191598.1 UniGene:At.21112 ProteinModelPortal:P46602
            SMR:P46602 IntAct:P46602 EnsemblPlants:AT3G60390.1 GeneID:825210
            KEGG:ath:AT3G60390 GeneFarm:3969 TAIR:At3g60390 eggNOG:NOG246006
            InParanoid:P46602 OMA:IQNTWIN PhylomeDB:P46602
            Genevestigator:P46602 GermOnline:AT3G60390 Uniprot:P46602
        Length = 315

 Score = 183 (69.5 bits), Expect = 1.8e-12, P = 1.8e-12
 Identities = 46/101 (45%), Positives = 63/101 (62%)

Query:    58 SEKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQL 117
             S KK RLS +Q   LE+ F+  + L P++K+ LA++L L+ RQV VWFQNRRAR K KQ 
Sbjct:   160 SRKKLRLSKEQALVLEETFKEHSTLNPKQKMALAKQLNLRTRQVEVWFQNRRARTKLKQT 219

Query:   118 ERDYGVLKANYDALKLNYDSLQHDNEALLKEIRELKS-KLN 157
             E D       Y  LK   ++L  +N  L KE+ EL++ KL+
Sbjct:   220 EVD-----CEY--LKRCCENLTDENRRLQKEVSELRALKLS 253


>TAIR|locus:2059143 [details] [associations]
            symbol:HAT9 species:3702 "Arabidopsis thaliana"
            [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0006473 "protein acetylation" evidence=RCA]
            InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00340 SMART:SM00389 GO:GO:0005634
            EMBL:AC004786 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
            GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
            SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
            ProtClustDB:CLSN2683864 EMBL:U09341 EMBL:U09342 EMBL:AJ441253
            EMBL:AK229218 IPI:IPI00526618 PIR:A84617 PIR:T52371 PIR:T52372
            RefSeq:NP_179865.1 UniGene:At.12844 UniGene:At.67823
            ProteinModelPortal:P46603 SMR:P46603 EnsemblPlants:AT2G22800.1
            GeneID:816811 KEGG:ath:AT2G22800 GeneFarm:3963 TAIR:At2g22800
            eggNOG:NOG323848 InParanoid:P46603 OMA:MHMPAST PhylomeDB:P46603
            Genevestigator:P46603 GermOnline:AT2G22800 Uniprot:P46603
        Length = 274

 Score = 179 (68.1 bits), Expect = 2.7e-12, P = 2.7e-12
 Identities = 46/102 (45%), Positives = 64/102 (62%)

Query:    58 SEKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQL 117
             + KK RL+  Q   LE++F+  + L P++K  LA++L L+PRQV VWFQNRRAR K KQ 
Sbjct:   111 ARKKLRLTKQQSALLEESFKDHSTLNPKQKQVLARQLNLRPRQVEVWFQNRRARTKLKQT 170

Query:   118 ERDYGVLKANYDALKLNYDSLQHDNEALLKEIRELKS-KLNE 158
             E D        + LK   ++L  +N  L KEI+ELK+ KL +
Sbjct:   171 EVDC-------EFLKKCCETLADENIRLQKEIQELKTLKLTQ 205


>TAIR|locus:2049614 [details] [associations]
            symbol:HB17 "homeobox-leucine zipper protein 17"
            species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA;ISS] [GO:0005634
            "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
            InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00340 SMART:SM00389 GO:GO:0005634 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 EMBL:AJ431181
            EMBL:AC005560 IPI:IPI00540169 PIR:F84424 RefSeq:NP_178252.2
            UniGene:At.42490 HSSP:P01366 ProteinModelPortal:Q8S9N6 SMR:Q8S9N6
            PRIDE:Q8S9N6 EnsemblPlants:AT2G01430.1 GeneID:814671
            KEGG:ath:AT2G01430 GeneFarm:3960 TAIR:At2g01430 eggNOG:NOG248755
            HOGENOM:HOG000241612 InParanoid:Q8S9N6 OMA:PRCERIT PhylomeDB:Q8S9N6
            ProtClustDB:CLSN2917976 Genevestigator:Q8S9N6 GermOnline:AT2G01430
            Uniprot:Q8S9N6
        Length = 275

 Score = 172 (65.6 bits), Expect = 2.5e-11, P = 2.5e-11
 Identities = 41/95 (43%), Positives = 59/95 (62%)

Query:    60 KKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLER 119
             KK RL+ +Q + LE +F   + L P++K  LA+ L L+PRQ+ VWFQNRRAR K KQ E 
Sbjct:   139 KKLRLTREQSRLLEDSFRQNHTLNPKQKEVLAKHLMLRPRQIEVWFQNRRARSKLKQTE- 197

Query:   120 DYGVLKANYDALKLNYDSLQHDNEALLKEIRELKS 154
                 ++  Y  LK  + SL  +N  L +E+ EL++
Sbjct:   198 ----MECEY--LKRWFGSLTEENHRLHREVEELRA 226


>TAIR|locus:2013980 [details] [associations]
            symbol:HB18 "homeobox-leucine zipper protein 18"
            species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
            evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA;ISS] [GO:0005634
            "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
            InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00340 SMART:SM00389 EMBL:CP002684 GenomeReviews:CT485782_GR
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
            EMBL:AC008148 EMBL:AK118149 EMBL:BT005594 EMBL:AK175837
            EMBL:AK175965 IPI:IPI00520212 RefSeq:NP_177248.3 UniGene:At.35255
            HSSP:Q6B2C0 ProteinModelPortal:Q8GXM7 SMR:Q8GXM7
            EnsemblPlants:AT1G70920.1 GeneID:843431 KEGG:ath:AT1G70920
            GeneFarm:3959 TAIR:At1g70920 eggNOG:NOG312506 InParanoid:Q8GXM7
            OMA:HTEMECE PhylomeDB:Q8GXM7 ProtClustDB:CLSN2918454
            Genevestigator:Q8GXM7 GermOnline:AT1G70920 Uniprot:Q8GXM7
        Length = 206

 Score = 156 (60.0 bits), Expect = 4.4e-11, P = 4.4e-11
 Identities = 45/124 (36%), Positives = 65/124 (52%)

Query:    60 KKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLER 119
             KK RL+ +Q   LE++F   + L P++K  LA  L L  RQV VWFQNRRAR K K  E 
Sbjct:    69 KKLRLTKEQSHLLEESFIQNHTLTPKQKKDLATFLKLSQRQVEVWFQNRRARSKLKHTE- 127

Query:   120 DYGVLKANYDALKLNYDSLQHDNEALLKEIRELKSKLNEENTESNISVKQEETIVHETDH 179
                 ++  Y  LK  + SL+  N  L  E+ EL++ L   +T +     + E +    D+
Sbjct:   128 ----MECEY--LKRWFGSLKEQNRRLQIEVEELRA-LKPSSTSALTMCPRCERVTDAVDN 180

Query:   180 QNKA 183
              + A
Sbjct:   181 DSNA 184


>UNIPROTKB|F1SC87 [details] [associations]
            symbol:HHEX "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0090009 "primitive
            streak formation" evidence=IEA] [GO:0071837 "HMG box domain
            binding" evidence=IEA] [GO:0071103 "DNA conformation change"
            evidence=IEA] [GO:0070491 "repressing transcription factor binding"
            evidence=IEA] [GO:0070365 "hepatocyte differentiation"
            evidence=IEA] [GO:0061017 "hepatoblast differentiation"
            evidence=IEA] [GO:0061011 "hepatic duct development" evidence=IEA]
            [GO:0061010 "gall bladder development" evidence=IEA] [GO:0061009
            "common bile duct development" evidence=IEA] [GO:0060431 "primary
            lung bud formation" evidence=IEA] [GO:0048853 "forebrain
            morphogenesis" evidence=IEA] [GO:0048568 "embryonic organ
            development" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0044212 "transcription regulatory region DNA binding"
            evidence=IEA] [GO:0042803 "protein homodimerization activity"
            evidence=IEA] [GO:0042127 "regulation of cell proliferation"
            evidence=IEA] [GO:0035264 "multicellular organism growth"
            evidence=IEA] [GO:0035050 "embryonic heart tube development"
            evidence=IEA] [GO:0034504 "protein localization to nucleus"
            evidence=IEA] [GO:0032993 "protein-DNA complex" evidence=IEA]
            [GO:0031016 "pancreas development" evidence=IEA] [GO:0030878
            "thyroid gland development" evidence=IEA] [GO:0030183 "B cell
            differentiation" evidence=IEA] [GO:0030177 "positive regulation of
            Wnt receptor signaling pathway" evidence=IEA] [GO:0022027
            "interkinetic nuclear migration" evidence=IEA] [GO:0016973
            "poly(A)+ mRNA export from nucleus" evidence=IEA] [GO:0008301 "DNA
            binding, bending" evidence=IEA] [GO:0008190 "eukaryotic initiation
            factor 4E binding" evidence=IEA] [GO:0007492 "endoderm development"
            evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
            [GO:0007049 "cell cycle" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
            [GO:0002573 "myeloid leukocyte differentiation" evidence=IEA]
            [GO:0001701 "in utero embryonic development" evidence=IEA]
            [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
            GO:GO:0007165 GO:GO:0043565 GO:GO:0001701 GO:GO:0045944
            GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0000122
            GO:GO:0008301 GO:GO:0044212 GO:GO:0007049 GO:GO:0030183
            GO:GO:0035264 GO:GO:0001570 GO:GO:0031016 GO:GO:0007492
            GO:GO:0070365 GO:GO:0030177 GO:GO:0034504 GO:GO:0032993
            GO:GO:0048568 GO:GO:0090009 GO:GO:0022027 GO:GO:0035050
            GO:GO:0016973 GO:GO:0030878 GeneTree:ENSGT00680000099625
            GO:GO:0048853 GO:GO:0061009 CTD:3087 KO:K08024 OMA:DNSCDQR
            GO:GO:0071103 GO:GO:0061010 GO:GO:0061011 GO:GO:0061017
            GO:GO:0002573 GO:GO:0060431 EMBL:CU467586 RefSeq:NP_001231508.1
            UniGene:Ssc.15862 Ensembl:ENSSSCT00000011460 GeneID:397232
            KEGG:ssc:397232 Uniprot:F1SC87
        Length = 269

 Score = 161 (61.7 bits), Expect = 5.9e-10, P = 5.9e-10
 Identities = 41/120 (34%), Positives = 60/120 (50%)

Query:    63 RLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYG 122
             R S DQ   LEK FE +  L P  + +LA+ L L  RQV  WFQNRRA+W+  + E    
Sbjct:   143 RFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQN 202

Query:   123 VLKANYDALKLNYDSLQ----HDNEALLKEIRELKSKLNEENTESNISVKQEETIVHETD 178
               K   ++L  + D  Q      N+  L   +   S +++E+ ES IS   ++ +  E D
Sbjct:   203 NKKEELESLDNSCDQRQDLPSEQNKGALDSSQCSPSPVSQEDLESEISEDSDQEVDIEGD 262


>UNIPROTKB|A7YWK1 [details] [associations]
            symbol:HHEX "HHEX protein" species:9913 "Bos taurus"
            [GO:0005634 "nucleus" evidence=IEA] [GO:0090009 "primitive streak
            formation" evidence=IEA] [GO:0071837 "HMG box domain binding"
            evidence=IEA] [GO:0071103 "DNA conformation change" evidence=IEA]
            [GO:0070491 "repressing transcription factor binding" evidence=IEA]
            [GO:0070365 "hepatocyte differentiation" evidence=IEA] [GO:0061017
            "hepatoblast differentiation" evidence=IEA] [GO:0061011 "hepatic
            duct development" evidence=IEA] [GO:0061010 "gall bladder
            development" evidence=IEA] [GO:0061009 "common bile duct
            development" evidence=IEA] [GO:0060431 "primary lung bud formation"
            evidence=IEA] [GO:0048853 "forebrain morphogenesis" evidence=IEA]
            [GO:0048568 "embryonic organ development" evidence=IEA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0044212 "transcription regulatory
            region DNA binding" evidence=IEA] [GO:0042803 "protein
            homodimerization activity" evidence=IEA] [GO:0042127 "regulation of
            cell proliferation" evidence=IEA] [GO:0035264 "multicellular
            organism growth" evidence=IEA] [GO:0035050 "embryonic heart tube
            development" evidence=IEA] [GO:0034504 "protein localization to
            nucleus" evidence=IEA] [GO:0032993 "protein-DNA complex"
            evidence=IEA] [GO:0031016 "pancreas development" evidence=IEA]
            [GO:0030878 "thyroid gland development" evidence=IEA] [GO:0030183
            "B cell differentiation" evidence=IEA] [GO:0030177 "positive
            regulation of Wnt receptor signaling pathway" evidence=IEA]
            [GO:0022027 "interkinetic nuclear migration" evidence=IEA]
            [GO:0016973 "poly(A)+ mRNA export from nucleus" evidence=IEA]
            [GO:0008301 "DNA binding, bending" evidence=IEA] [GO:0008190
            "eukaryotic initiation factor 4E binding" evidence=IEA] [GO:0007492
            "endoderm development" evidence=IEA] [GO:0007165 "signal
            transduction" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003682 "chromatin
            binding" evidence=IEA] [GO:0002573 "myeloid leukocyte
            differentiation" evidence=IEA] [GO:0001701 "in utero embryonic
            development" evidence=IEA] [GO:0001570 "vasculogenesis"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0007165
            GO:GO:0043565 GO:GO:0001701 GO:GO:0045944 GO:GO:0003700
            GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0000122 GO:GO:0008301
            GO:GO:0044212 GO:GO:0007049 GO:GO:0030183 GO:GO:0035264
            GO:GO:0001570 GO:GO:0031016 GO:GO:0007492 GO:GO:0070365
            GO:GO:0030177 eggNOG:NOG252905 GO:GO:0034504 GO:GO:0032993
            GO:GO:0048568 GO:GO:0090009 GO:GO:0022027 GO:GO:0035050
            GO:GO:0016973 GO:GO:0030878 GeneTree:ENSGT00680000099625
            GO:GO:0048853 GO:GO:0061009 CTD:3087 HOGENOM:HOG000049110
            HOVERGEN:HBG055460 KO:K08024 OrthoDB:EOG4XKV7W OMA:DNSCDQR
            GO:GO:0071103 GO:GO:0061010 GO:GO:0061011 GO:GO:0061017
            GO:GO:0002573 GO:GO:0060431 EMBL:DAAA02058821 EMBL:BC134632
            IPI:IPI00712870 RefSeq:NP_001098894.1 UniGene:Bt.27920 SMR:A7YWK1
            Ensembl:ENSBTAT00000018899 GeneID:539542 KEGG:bta:539542
            InParanoid:A7YWK1 NextBio:20878060 Uniprot:A7YWK1
        Length = 271

 Score = 160 (61.4 bits), Expect = 8.4e-10, P = 8.4e-10
 Identities = 41/120 (34%), Positives = 60/120 (50%)

Query:    63 RLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYG 122
             R S DQ   LEK FE +  L P  + +LA+ L L  RQV  WFQNRRA+W+  + E    
Sbjct:   145 RFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQN 204

Query:   123 VLKANYDALKLNYDSLQH----DNEALLKEIRELKSKLNEENTESNISVKQEETIVHETD 178
               K   ++L  + D  Q      N   L+  +   S +++E+ ES IS   ++ +  E D
Sbjct:   205 NKKEELESLDNSCDQRQDLPSDQNTGALESSQCSPSPVSQEDLESEISEDSDQEVDIEGD 264


>UNIPROTKB|E2QXS9 [details] [associations]
            symbol:HHEX "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0090009
            "primitive streak formation" evidence=IEA] [GO:0071837 "HMG box
            domain binding" evidence=IEA] [GO:0071103 "DNA conformation change"
            evidence=IEA] [GO:0070491 "repressing transcription factor binding"
            evidence=IEA] [GO:0070365 "hepatocyte differentiation"
            evidence=IEA] [GO:0061017 "hepatoblast differentiation"
            evidence=IEA] [GO:0061011 "hepatic duct development" evidence=IEA]
            [GO:0061010 "gall bladder development" evidence=IEA] [GO:0061009
            "common bile duct development" evidence=IEA] [GO:0060431 "primary
            lung bud formation" evidence=IEA] [GO:0048853 "forebrain
            morphogenesis" evidence=IEA] [GO:0048568 "embryonic organ
            development" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0044212 "transcription regulatory region DNA binding"
            evidence=IEA] [GO:0042803 "protein homodimerization activity"
            evidence=IEA] [GO:0042127 "regulation of cell proliferation"
            evidence=IEA] [GO:0035264 "multicellular organism growth"
            evidence=IEA] [GO:0035050 "embryonic heart tube development"
            evidence=IEA] [GO:0034504 "protein localization to nucleus"
            evidence=IEA] [GO:0032993 "protein-DNA complex" evidence=IEA]
            [GO:0031016 "pancreas development" evidence=IEA] [GO:0030878
            "thyroid gland development" evidence=IEA] [GO:0030183 "B cell
            differentiation" evidence=IEA] [GO:0030177 "positive regulation of
            Wnt receptor signaling pathway" evidence=IEA] [GO:0022027
            "interkinetic nuclear migration" evidence=IEA] [GO:0016973
            "poly(A)+ mRNA export from nucleus" evidence=IEA] [GO:0008301 "DNA
            binding, bending" evidence=IEA] [GO:0008190 "eukaryotic initiation
            factor 4E binding" evidence=IEA] [GO:0007492 "endoderm development"
            evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
            [GO:0007049 "cell cycle" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
            [GO:0002573 "myeloid leukocyte differentiation" evidence=IEA]
            [GO:0001701 "in utero embryonic development" evidence=IEA]
            [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
            GO:GO:0007165 GO:GO:0043565 GO:GO:0001701 GO:GO:0045944
            GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0000122
            GO:GO:0008301 GO:GO:0044212 GO:GO:0007049 GO:GO:0030183
            GO:GO:0035264 GO:GO:0001570 GO:GO:0031016 GO:GO:0007492
            GO:GO:0070365 GO:GO:0030177 GO:GO:0034504 GO:GO:0032993
            GO:GO:0048568 GO:GO:0090009 GO:GO:0022027 GO:GO:0035050
            GO:GO:0016973 GO:GO:0030878 GeneTree:ENSGT00680000099625
            GO:GO:0048853 GO:GO:0061009 CTD:3087 KO:K08024 OMA:DNSCDQR
            GO:GO:0071103 GO:GO:0061010 GO:GO:0061011 GO:GO:0061017
            GO:GO:0002573 GO:GO:0060431 EMBL:AAEX03015414 RefSeq:XP_850204.1
            Ensembl:ENSCAFT00000012018 GeneID:608175 KEGG:cfa:608175
            NextBio:20893846 Uniprot:E2QXS9
        Length = 270

 Score = 156 (60.0 bits), Expect = 2.6e-09, P = 2.6e-09
 Identities = 41/120 (34%), Positives = 58/120 (48%)

Query:    63 RLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYG 122
             R S DQ   LEK FE +  L P  + +LA+ L L  RQV  WFQNRRA+W+  + E    
Sbjct:   144 RFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQS 203

Query:   123 VLKANYDALKLNYDSLQ----HDNEALLKEIRELKSKLNEENTESNISVKQEETIVHETD 178
               K   ++L    D  Q      N+  L   +   S  ++E+ ES IS   ++ +  E D
Sbjct:   204 NKKEELESLDNPCDQRQDLSSEQNKGALDSSQCSPSPASQEDLESEISEDSDQEVDIEGD 263


>UNIPROTKB|Q03014 [details] [associations]
            symbol:HHEX "Hematopoietically-expressed homeobox protein
            HHEX" species:9606 "Homo sapiens" [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
            [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001701 "in utero
            embryonic development" evidence=IEA] [GO:0002573 "myeloid leukocyte
            differentiation" evidence=IEA] [GO:0003682 "chromatin binding"
            evidence=IEA] [GO:0007492 "endoderm development" evidence=IEA]
            [GO:0009611 "response to wounding" evidence=IEA] [GO:0022027
            "interkinetic nuclear migration" evidence=IEA] [GO:0030878 "thyroid
            gland development" evidence=IEA] [GO:0031016 "pancreas development"
            evidence=IEA] [GO:0035050 "embryonic heart tube development"
            evidence=IEA] [GO:0035264 "multicellular organism growth"
            evidence=IEA] [GO:0042127 "regulation of cell proliferation"
            evidence=IEA] [GO:0043434 "response to peptide hormone stimulus"
            evidence=IEA] [GO:0048568 "embryonic organ development"
            evidence=IEA] [GO:0048853 "forebrain morphogenesis" evidence=IEA]
            [GO:0060431 "primary lung bud formation" evidence=IEA] [GO:0061009
            "common bile duct development" evidence=IEA] [GO:0061010 "gall
            bladder development" evidence=IEA] [GO:0061011 "hepatic duct
            development" evidence=IEA] [GO:0061017 "hepatoblast
            differentiation" evidence=IEA] [GO:0070365 "hepatocyte
            differentiation" evidence=IEA] [GO:0071837 "HMG box domain binding"
            evidence=IEA] [GO:0090009 "primitive streak formation"
            evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=ISS] [GO:0030177 "positive regulation of Wnt receptor
            signaling pathway" evidence=ISS] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IDA] [GO:0006406 "mRNA export from nucleus"
            evidence=IDA] [GO:0007049 "cell cycle" evidence=IDA] [GO:0008190
            "eukaryotic initiation factor 4E binding" evidence=IDA] [GO:0008283
            "cell proliferation" evidence=IDA] [GO:0045892 "negative regulation
            of transcription, DNA-dependent" evidence=IDA] [GO:0043565
            "sequence-specific DNA binding" evidence=IDA] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IDA] [GO:0008134 "transcription factor binding"
            evidence=IPI] [GO:0030154 "cell differentiation" evidence=IC]
            [GO:0030183 "B cell differentiation" evidence=ISS] [GO:0016973
            "poly(A)+ mRNA export from nucleus" evidence=IMP] [GO:0042803
            "protein homodimerization activity" evidence=IPI] [GO:0070491
            "repressing transcription factor binding" evidence=IDA] [GO:0044212
            "transcription regulatory region DNA binding" evidence=IDA;TAS]
            [GO:0010944 "negative regulation of transcription by competitive
            promoter binding" evidence=TAS] [GO:0017025 "TBP-class protein
            binding" evidence=TAS] [GO:0034504 "protein localization to
            nucleus" evidence=IDA] [GO:0010621 "negative regulation of
            transcription by transcription factor localization" evidence=IC]
            [GO:0032993 "protein-DNA complex" evidence=IDA] [GO:0008301 "DNA
            binding, bending" evidence=IDA] [GO:0071103 "DNA conformation
            change" evidence=IDA] [GO:0016525 "negative regulation of
            angiogenesis" evidence=ISS] [GO:0030948 "negative regulation of
            vascular endothelial growth factor receptor signaling pathway"
            evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0009611
            GO:GO:0016055 GO:GO:0009952 GO:GO:0008283 EMBL:CH471066
            GO:GO:0043565 GO:GO:0001701 GO:GO:0043434 GO:GO:0045944
            GO:GO:0003700 GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042127
            GO:GO:0000122 GO:GO:0008301 GO:GO:0044212 GO:GO:0007049
            GO:GO:0030183 GO:GO:0035264 GO:GO:0001570 GO:GO:0016525
            GO:GO:0031016 GO:GO:0007492 GO:GO:0070365 GO:GO:0010944
            GO:GO:0030177 eggNOG:NOG252905 GO:GO:0034504 GO:GO:0032993
            GO:GO:0048568 GO:GO:0090009 GO:GO:0017025 GO:GO:0070491
            GO:GO:0030948 GO:GO:0022027 GO:GO:0035050 GO:GO:0008190
            GO:GO:0016973 GO:GO:0030878 EMBL:AL590080 GO:GO:0048853
            GO:GO:0010621 GO:GO:0061009 CTD:3087 HOGENOM:HOG000049110
            HOVERGEN:HBG055460 KO:K08024 OrthoDB:EOG4XKV7W EMBL:X67235
            EMBL:L16499 EMBL:AK314891 EMBL:BC014336 EMBL:BC015110 EMBL:BC050638
            EMBL:Z21533 IPI:IPI00008771 PIR:JN0767 RefSeq:NP_002720.1
            UniGene:Hs.118651 PDB:2E1O PDBsum:2E1O ProteinModelPortal:Q03014
            SMR:Q03014 IntAct:Q03014 MINT:MINT-1439118 STRING:Q03014
            PhosphoSite:Q03014 DMDM:547658 PRIDE:Q03014 DNASU:3087
            Ensembl:ENST00000282728 GeneID:3087 KEGG:hsa:3087 UCSC:uc001kid.3
            GeneCards:GC10P094439 HGNC:HGNC:4901 MIM:604420 neXtProt:NX_Q03014
            PharmGKB:PA29274 InParanoid:Q03014 OMA:DNSCDQR PhylomeDB:Q03014
            EvolutionaryTrace:Q03014 GenomeRNAi:3087 NextBio:12253
            ArrayExpress:Q03014 Bgee:Q03014 CleanEx:HS_HHEX
            Genevestigator:Q03014 GermOnline:ENSG00000152804 GO:GO:0071103
            GO:GO:0061010 GO:GO:0061011 GO:GO:0061017 GO:GO:0002573
            GO:GO:0060431 Uniprot:Q03014
        Length = 270

 Score = 154 (59.3 bits), Expect = 4.6e-09, P = 4.6e-09
 Identities = 42/121 (34%), Positives = 60/121 (49%)

Query:    63 RLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYG 122
             R S DQ   LEK FE +  L P  + +LA+ L L  RQV  WFQNRRA+W+  + E    
Sbjct:   143 RFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQS 202

Query:   123 VLKANYDALKLNYDSLQ----HDNE-ALLKEIRELKSKLNEENTESNISVKQEETIVHET 177
               K   ++L  + D  Q      N+ A L   +   S  ++E+ ES IS   ++ +  E 
Sbjct:   203 NKKEELESLDSSCDQRQDLPSEQNKGASLDSSQCSPSPASQEDLESEISEDSDQEVDIEG 262

Query:   178 D 178
             D
Sbjct:   263 D 263


>RGD|619932 [details] [associations]
            symbol:Hhex "hematopoietically expressed homeobox" species:10116
            "Rattus norvegicus" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=ISO;IDA]
            [GO:0001570 "vasculogenesis" evidence=IEA;ISO] [GO:0001701 "in
            utero embryonic development" evidence=IEA;ISO] [GO:0001889 "liver
            development" evidence=ISO] [GO:0002009 "morphogenesis of an
            epithelium" evidence=ISO] [GO:0002573 "myeloid leukocyte
            differentiation" evidence=IEA;ISO] [GO:0003682 "chromatin binding"
            evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA;ISO] [GO:0005634
            "nucleus" evidence=ISO;IDA;TAS] [GO:0005737 "cytoplasm"
            evidence=IEA;ISO] [GO:0006357 "regulation of transcription from RNA
            polymerase II promoter" evidence=ISO] [GO:0006406 "mRNA export from
            nucleus" evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA;ISO]
            [GO:0007165 "signal transduction" evidence=IEA;ISO] [GO:0007492
            "endoderm development" evidence=IEA;ISO] [GO:0008134 "transcription
            factor binding" evidence=ISO] [GO:0008190 "eukaryotic initiation
            factor 4E binding" evidence=IEA;ISO] [GO:0008283 "cell
            proliferation" evidence=ISO] [GO:0008301 "DNA binding, bending"
            evidence=IEA;ISO] [GO:0009611 "response to wounding" evidence=IEP]
            [GO:0009887 "organ morphogenesis" evidence=ISO] [GO:0009952
            "anterior/posterior pattern specification" evidence=ISO]
            [GO:0016525 "negative regulation of angiogenesis" evidence=ISO;IDA]
            [GO:0016973 "poly(A)+ mRNA export from nucleus" evidence=IEA;ISO]
            [GO:0022027 "interkinetic nuclear migration" evidence=IEA;ISO]
            [GO:0030097 "hemopoiesis" evidence=ISO;TAS] [GO:0030154 "cell
            differentiation" evidence=IDA] [GO:0030177 "positive regulation of
            Wnt receptor signaling pathway" evidence=IEA;ISO] [GO:0030183 "B
            cell differentiation" evidence=IEA;ISO] [GO:0030878 "thyroid gland
            development" evidence=IEA;ISO] [GO:0030900 "forebrain development"
            evidence=ISO] [GO:0030948 "negative regulation of vascular
            endothelial growth factor receptor signaling pathway"
            evidence=ISO;IDA] [GO:0031016 "pancreas development"
            evidence=IEA;ISO] [GO:0032993 "protein-DNA complex"
            evidence=IEA;ISO] [GO:0034504 "protein localization to nucleus"
            evidence=IEA;ISO] [GO:0035050 "embryonic heart tube development"
            evidence=IEA;ISO] [GO:0035264 "multicellular organism growth"
            evidence=IEA;ISO] [GO:0042127 "regulation of cell proliferation"
            evidence=IEA;ISO] [GO:0042803 "protein homodimerization activity"
            evidence=IEA;ISO] [GO:0043434 "response to peptide hormone
            stimulus" evidence=IEP] [GO:0043565 "sequence-specific DNA binding"
            evidence=ISO;IDA] [GO:0044212 "transcription regulatory region DNA
            binding" evidence=IEA;ISO] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=ISO;IDA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IEA;ISO] [GO:0048568 "embryonic organ
            development" evidence=IEA;ISO] [GO:0048729 "tissue morphogenesis"
            evidence=ISO] [GO:0048853 "forebrain morphogenesis"
            evidence=IEA;ISO] [GO:0060431 "primary lung bud formation"
            evidence=IEA;ISO] [GO:0061009 "common bile duct development"
            evidence=IEA;ISO] [GO:0061010 "gall bladder development"
            evidence=IEA;ISO] [GO:0061011 "hepatic duct development"
            evidence=IEA;ISO] [GO:0061017 "hepatoblast differentiation"
            evidence=IEA;ISO] [GO:0070365 "hepatocyte differentiation"
            evidence=IEA;ISO] [GO:0070491 "repressing transcription factor
            binding" evidence=IEA;ISO] [GO:0071103 "DNA conformation change"
            evidence=IEA;ISO] [GO:0071837 "HMG box domain binding"
            evidence=IEA;ISO] [GO:0090009 "primitive streak formation"
            evidence=IEA;ISO] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 RGD:619932 GO:GO:0005634 GO:GO:0005737 GO:GO:0007165
            GO:GO:0030154 GO:GO:0009611 GO:GO:0043565 GO:GO:0001701
            GO:GO:0043434 GO:GO:0045944 GO:GO:0003700 GO:GO:0003682
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0042127 GO:GO:0000122 GO:GO:0008301 GO:GO:0044212
            GO:GO:0007049 GO:GO:0030183 GO:GO:0035264 GO:GO:0030097
            GO:GO:0001570 GO:GO:0016525 GO:GO:0031016 GO:GO:0007492
            GO:GO:0070365 GO:GO:0030177 eggNOG:NOG252905 GO:GO:0034504
            GO:GO:0032993 GO:GO:0048568 GO:GO:0090009 GO:GO:0030948
            GO:GO:0022027 GO:GO:0035050 GO:GO:0016973 GO:GO:0030878
            EMBL:CH473953 GeneTree:ENSGT00680000099625 GO:GO:0048853
            GO:GO:0061009 CTD:3087 HOGENOM:HOG000049110 HOVERGEN:HBG055460
            KO:K08024 OrthoDB:EOG4XKV7W HSSP:P22808 OMA:DNSCDQR GO:GO:0071103
            GO:GO:0061010 GO:GO:0061011 GO:GO:0061017 GO:GO:0002573
            GO:GO:0060431 EMBL:BC088135 EMBL:D86383 IPI:IPI00211318
            RefSeq:NP_077361.1 UniGene:Rn.12188 SMR:Q9WV22 STRING:Q9WV22
            Ensembl:ENSRNOT00000022384 GeneID:79237 KEGG:rno:79237
            UCSC:RGD:619932 InParanoid:Q9WV22 NextBio:614664
            Genevestigator:Q9WV22 Uniprot:Q9WV22
        Length = 271

 Score = 153 (58.9 bits), Expect = 6.1e-09, P = 6.1e-09
 Identities = 43/121 (35%), Positives = 59/121 (48%)

Query:    63 RLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYG 122
             R S DQ   LEK FE +  L P  + +LA+ L L  RQV  WFQNRRA+W+  + E    
Sbjct:   144 RFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQS 203

Query:   123 VLKANYDALKLNYDSLQ----HDNE-ALLKEIRELKSKLNEENTESNISVKQEETIVHET 177
               K   D+L  + D  Q      N+ A L   +   S  + E+ ES IS   ++ +  E 
Sbjct:   204 NKKDELDSLDTSCDQGQDLPSEQNKGASLDSSQCSPSPASPEDPESEISEDSDQEVDIEG 263

Query:   178 D 178
             D
Sbjct:   264 D 264


>UNIPROTKB|Q8AWG6 [details] [associations]
            symbol:hhex "Hematopoietically-expressed homeobox protein
            hhex" species:8364 "Xenopus (Silurana) tropicalis" [GO:0000122
            "negative regulation of transcription from RNA polymerase II
            promoter" evidence=ISS] [GO:0001570 "vasculogenesis" evidence=ISS]
            [GO:0001889 "liver development" evidence=ISS] [GO:0005634 "nucleus"
            evidence=ISS] [GO:0007507 "heart development" evidence=ISS]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=ISS] [GO:0030177 "positive regulation of Wnt receptor
            signaling pathway" evidence=ISS] [GO:0035162 "embryonic
            hemopoiesis" evidence=ISS] [GO:0043565 "sequence-specific DNA
            binding" evidence=ISS] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=ISS] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0007507
            GO:GO:0016055 GO:GO:0009952 GO:GO:0043565 GO:GO:0001889
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0001570
            GO:GO:0030177 GO:GO:0035162 eggNOG:NOG252905 CTD:3087
            HOGENOM:HOG000049110 HOVERGEN:HBG055460 KO:K08024 OrthoDB:EOG4XKV7W
            HSSP:P22808 EMBL:AY160969 EMBL:CR761571 RefSeq:NP_989420.1
            UniGene:Str.111 ProteinModelPortal:Q8AWG6 SMR:Q8AWG6 STRING:Q8AWG6
            GeneID:395060 KEGG:xtr:395060 Xenbase:XB-GENE-487159
            InParanoid:Q8AWG6 Uniprot:Q8AWG6
        Length = 274

 Score = 152 (58.6 bits), Expect = 8.5e-09, P = 8.5e-09
 Identities = 47/130 (36%), Positives = 63/130 (48%)

Query:    63 RLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYG 122
             R S DQ   LEK FE +  L P  + +LA+ L L  RQV  WFQNRRA+W+  + E   G
Sbjct:   145 RFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQG 204

Query:   123 VLKANYDALKLNYDSLQHDNEALLKEIRELKSKLNEENTESNISVKQEETIVHETDHQNK 182
               K   ++L+   +  Q     L  E +  +S L+E  T S  S   +ET+  E      
Sbjct:   205 NKKDETESLENICEESQE--RCLSAEQKSRESSLDEP-TSSPTS---QETLDSEVSD--- 255

Query:   183 ATLDRDQESD 192
                D DQE D
Sbjct:   256 ---DSDQEVD 262


>MGI|MGI:96086 [details] [associations]
            symbol:Hhex "hematopoietically expressed homeobox"
            species:10090 "Mus musculus" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=ISO;IDA]
            [GO:0001570 "vasculogenesis" evidence=IMP] [GO:0001701 "in utero
            embryonic development" evidence=IMP] [GO:0001889 "liver
            development" evidence=IMP] [GO:0002009 "morphogenesis of an
            epithelium" evidence=IMP] [GO:0002573 "myeloid leukocyte
            differentiation" evidence=IMP] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=IDA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IDA] [GO:0005634 "nucleus" evidence=ISO;IDA]
            [GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0006357 "regulation of transcription from RNA polymerase II
            promoter" evidence=IMP] [GO:0006406 "mRNA export from nucleus"
            evidence=ISO] [GO:0007049 "cell cycle" evidence=ISO] [GO:0007165
            "signal transduction" evidence=IMP] [GO:0007275 "multicellular
            organismal development" evidence=IEA] [GO:0007492 "endoderm
            development" evidence=IMP] [GO:0008134 "transcription factor
            binding" evidence=ISO] [GO:0008190 "eukaryotic initiation factor 4E
            binding" evidence=ISO] [GO:0008283 "cell proliferation"
            evidence=ISO] [GO:0008301 "DNA binding, bending" evidence=ISO]
            [GO:0009887 "organ morphogenesis" evidence=IMP] [GO:0009952
            "anterior/posterior pattern specification" evidence=IMP]
            [GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
            [GO:0016525 "negative regulation of angiogenesis" evidence=ISO;IDA]
            [GO:0016973 "poly(A)+ mRNA export from nucleus" evidence=ISO]
            [GO:0022027 "interkinetic nuclear migration" evidence=IMP]
            [GO:0030097 "hemopoiesis" evidence=IMP] [GO:0030154 "cell
            differentiation" evidence=ISO] [GO:0030177 "positive regulation of
            Wnt receptor signaling pathway" evidence=IMP] [GO:0030183 "B cell
            differentiation" evidence=IMP] [GO:0030878 "thyroid gland
            development" evidence=IMP] [GO:0030900 "forebrain development"
            evidence=IMP] [GO:0030948 "negative regulation of vascular
            endothelial growth factor receptor signaling pathway"
            evidence=ISO;IDA] [GO:0031016 "pancreas development" evidence=IMP]
            [GO:0032993 "protein-DNA complex" evidence=ISO] [GO:0034504
            "protein localization to nucleus" evidence=ISO] [GO:0035050
            "embryonic heart tube development" evidence=IMP] [GO:0035264
            "multicellular organism growth" evidence=IMP] [GO:0042127
            "regulation of cell proliferation" evidence=IMP] [GO:0042803
            "protein homodimerization activity" evidence=ISO] [GO:0043565
            "sequence-specific DNA binding" evidence=ISO] [GO:0044212
            "transcription regulatory region DNA binding" evidence=ISO]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=ISO;IDA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=ISO] [GO:0048568
            "embryonic organ development" evidence=IMP] [GO:0048729 "tissue
            morphogenesis" evidence=IMP] [GO:0048853 "forebrain morphogenesis"
            evidence=IMP] [GO:0060431 "primary lung bud formation"
            evidence=IMP] [GO:0061009 "common bile duct development"
            evidence=IMP] [GO:0061010 "gall bladder development" evidence=IMP]
            [GO:0061011 "hepatic duct development" evidence=IMP] [GO:0061017
            "hepatoblast differentiation" evidence=IMP] [GO:0070365 "hepatocyte
            differentiation" evidence=IMP] [GO:0070491 "repressing
            transcription factor binding" evidence=ISO] [GO:0071103 "DNA
            conformation change" evidence=ISO] [GO:0071837 "HMG box domain
            binding" evidence=IPI] [GO:0090009 "primitive streak formation"
            evidence=IGI;IMP] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 MGI:MGI:96086 GO:GO:0005634 GO:GO:0005737
            GO:GO:0007165 GO:GO:0009611 GO:GO:0016055 GO:GO:0043565
            GO:GO:0001701 GO:GO:0043434 GO:GO:0045944 GO:GO:0003700
            GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0000122
            GO:GO:0008301 GO:GO:0044212 GO:GO:0007049 GO:GO:0030183
            GO:GO:0035264 GO:GO:0001570 GO:GO:0016525 GO:GO:0031016
            GO:GO:0007492 GO:GO:0070365 GO:GO:0030177 eggNOG:NOG252905
            GO:GO:0034504 GO:GO:0032993 GO:GO:0048568 GO:GO:0090009
            GO:GO:0030948 GO:GO:0022027 GO:GO:0035050 GO:GO:0016973
            GO:GO:0030878 GeneTree:ENSGT00680000099625 GO:GO:0048853
            GO:GO:0061009 CTD:3087 HOGENOM:HOG000049110 HOVERGEN:HBG055460
            KO:K08024 OrthoDB:EOG4XKV7W OMA:DNSCDQR GO:GO:0071103 GO:GO:0061010
            GO:GO:0061011 GO:GO:0061017 GO:GO:0002573 GO:GO:0060431 EMBL:Z21524
            EMBL:AB017132 EMBL:AF132550 EMBL:AK014111 EMBL:AK033664
            EMBL:BC057986 IPI:IPI00474062 PIR:S30230 RefSeq:NP_032271.1
            UniGene:Mm.33896 ProteinModelPortal:P43120 SMR:P43120 STRING:P43120
            PhosphoSite:P43120 PRIDE:P43120 Ensembl:ENSMUST00000025944
            GeneID:15242 KEGG:mmu:15242 UCSC:uc008hio.1 InParanoid:P43120
            NextBio:287843 Bgee:P43120 CleanEx:MM_HHEX Genevestigator:P43120
            GermOnline:ENSMUSG00000024986 Uniprot:P43120
        Length = 271

 Score = 148 (57.2 bits), Expect = 2.5e-08, P = 2.5e-08
 Identities = 41/121 (33%), Positives = 60/121 (49%)

Query:    63 RLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYG 122
             R S DQ   LEK FE +  L P  + +LA+ L L  RQV  WFQNRRA+W+  + E    
Sbjct:   144 RFSNDQTVELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQS 203

Query:   123 VLKANYDALKLNYDSLQ----HDNE-ALLKEIRELKSKLNEENTESNISVKQEETIVHET 177
               K   D+L  + +  Q      N+ A L   +   S  ++E+ +S IS   ++ +  E 
Sbjct:   204 NKKDALDSLDTSCEQGQDLPSEQNKGASLDRSQCSPSPASQEDPDSEISEDSDQEVDIEG 263

Query:   178 D 178
             D
Sbjct:   264 D 264


>UNIPROTKB|O13023 [details] [associations]
            symbol:hhex "Hematopoietically-expressed homeobox protein
            hhex" species:8355 "Xenopus laevis" [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=ISS] [GO:0001570 "vasculogenesis" evidence=IMP]
            [GO:0001889 "liver development" evidence=IEP] [GO:0005634 "nucleus"
            evidence=ISS] [GO:0007507 "heart development" evidence=IMP]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IEP;IMP] [GO:0030177 "positive regulation of Wnt receptor
            signaling pathway" evidence=IMP] [GO:0035162 "embryonic
            hemopoiesis" evidence=ISS] [GO:0043565 "sequence-specific DNA
            binding" evidence=ISS] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=ISS] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0007507
            GO:GO:0016055 GO:GO:0009952 GO:GO:0043565 GO:GO:0001889
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0001570
            GO:GO:0030177 GO:GO:0035162 CTD:3087 HOVERGEN:HBG055460 KO:K08024
            HSSP:P22808 EMBL:U94837 EMBL:BC059320 RefSeq:NP_001079059.1
            UniGene:Xl.225 ProteinModelPortal:O13023 SMR:O13023 GeneID:373590
            KEGG:xla:373590 Xenbase:XB-GENE-865680 Uniprot:O13023
        Length = 272

 Score = 146 (56.5 bits), Expect = 4.5e-08, P = 4.5e-08
 Identities = 36/118 (30%), Positives = 57/118 (48%)

Query:    63 RLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYG 122
             R S DQ   LEK FE +  L P  + +LA+ L L  RQV  WFQNRRA+W+  + E   G
Sbjct:   143 RFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQG 202

Query:   123 VLKANYDALKLNYDSLQHDNEALLKEIRELKSKLNEENTESNISVKQEETIVHETDHQ 180
               K   ++L+   +  Q     L  E +  +S L++  +        +  +  ++D +
Sbjct:   203 NKKDETESLENICEESQE--RCLSAEQKSRESSLDDPTSSPTSQGNLDSEVSDDSDQE 258


>WB|WBGene00004011 [details] [associations]
            symbol:pha-2 species:6239 "Caenorhabditis elegans"
            [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0000976 "transcription
            regulatory region sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0043282 "pharyngeal muscle development"
            evidence=IMP] [GO:0042755 "eating behavior" evidence=IMP]
            [GO:0042694 "muscle cell fate specification" evidence=IMP]
            [GO:0006357 "regulation of transcription from RNA polymerase II
            promoter" evidence=IMP] [GO:0009887 "organ morphogenesis"
            evidence=IMP] [GO:0030036 "actin cytoskeleton organization"
            evidence=IMP] [GO:0040014 "regulation of multicellular organism
            growth" evidence=IGI;IMP] [GO:0002119 "nematode larval development"
            evidence=IGI] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0002119 GO:GO:0042694 GO:GO:0030036 GO:GO:0040014
            GO:GO:0042755 GO:GO:0003700 GO:GO:0006357 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0009887
            GO:GO:0000976 GeneTree:ENSGT00680000099625 GO:GO:0043282 KO:K08024
            EMBL:FO081140 RefSeq:NP_508131.3 ProteinModelPortal:Q21578
            SMR:Q21578 EnsemblMetazoa:M6.3 GeneID:187454 KEGG:cel:CELE_M6.3
            UCSC:M6.3 CTD:187454 WormBase:M6.3 InParanoid:Q21578 OMA:DEDEMPN
            NextBio:935326 ArrayExpress:Q21578 Uniprot:Q21578
        Length = 166

 Score = 129 (50.5 bits), Expect = 5.0e-08, P = 5.0e-08
 Identities = 24/51 (47%), Positives = 32/51 (62%)

Query:    63 RLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 113
             R + +Q  ALE  F+    L P+ + KLA+ L L  RQV  WFQNRRA+W+
Sbjct:    82 RFTNEQTDALEHKFDSHKYLSPQERKKLAKSLSLSERQVKTWFQNRRAKWR 132


>UNIPROTKB|F1NXJ0 [details] [associations]
            symbol:DBX2 "Homeobox protein DBX2" species:9031 "Gallus
            gallus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0000976 GeneTree:ENSGT00700000104097 IPI:IPI00822533
            EMBL:AADN02010005 EMBL:AADN02010006 Ensembl:ENSGALT00000038779
            ArrayExpress:F1NXJ0 Uniprot:F1NXJ0
        Length = 160

 Score = 127 (49.8 bits), Expect = 8.2e-08, P = 8.2e-08
 Identities = 28/71 (39%), Positives = 42/71 (59%)

Query:    65 SVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVL 124
             S DQ KALEK F+ +  +    + KLA  LGL+  QV +WFQNRR +W+  + E++    
Sbjct:    20 SEDQRKALEKMFQKQKYISKTDRKKLAINLGLKESQVKIWFQNRRMKWRNSK-EKEVLSN 78

Query:   125 KANYDALKLNY 135
             +   + L+ NY
Sbjct:    79 RCLQEGLQENY 89


>UNIPROTKB|F1P169 [details] [associations]
            symbol:DBX2 "Homeobox protein DBX2" species:9031 "Gallus
            gallus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0000976 GeneTree:ENSGT00700000104097 EMBL:AADN02010005
            EMBL:AADN02010006 IPI:IPI00822985 Ensembl:ENSGALT00000015650
            ArrayExpress:F1P169 Uniprot:F1P169
        Length = 156

 Score = 127 (49.8 bits), Expect = 8.2e-08, P = 8.2e-08
 Identities = 28/71 (39%), Positives = 42/71 (59%)

Query:    65 SVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVL 124
             S DQ KALEK F+ +  +    + KLA  LGL+  QV +WFQNRR +W+  + E++    
Sbjct:    17 SEDQRKALEKMFQKQKYISKTDRKKLAINLGLKESQVKIWFQNRRMKWRNSK-EKEVLSN 75

Query:   125 KANYDALKLNY 135
             +   + L+ NY
Sbjct:    76 RCLQEGLQENY 86


>UNIPROTKB|Q91975 [details] [associations]
            symbol:DBX2 "Homeobox protein DBX2" species:9031 "Gallus
            gallus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG270330 HOGENOM:HOG000112172
            HOVERGEN:HBG104467 OrthoDB:EOG4MPHQG EMBL:X59548 EMBL:X59549
            IPI:IPI00822533 PIR:A56566 UniGene:Gga.12249
            ProteinModelPortal:Q91975 SMR:Q91975 ArrayExpress:Q91975
            Uniprot:Q91975
        Length = 157

 Score = 127 (49.8 bits), Expect = 8.2e-08, P = 8.2e-08
 Identities = 28/71 (39%), Positives = 42/71 (59%)

Query:    65 SVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVL 124
             S DQ KALEK F+ +  +    + KLA  LGL+  QV +WFQNRR +W+  + E++    
Sbjct:    17 SEDQRKALEKMFQKQKYISKTDRKKLAINLGLKESQVKIWFQNRRMKWRNSK-EKEVLSN 75

Query:   125 KANYDALKLNY 135
             +   + L+ NY
Sbjct:    76 RCLQEGLQENY 86


>UNIPROTKB|G3V2N9 [details] [associations]
            symbol:NOBOX "Homeobox protein NOBOX" species:9606 "Homo
            sapiens" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GO:GO:0000976 EMBL:AC004534 HGNC:HGNC:22448
            ProteinModelPortal:G3V2N9 SMR:G3V2N9 Ensembl:ENST00000555556
            ArrayExpress:G3V2N9 Bgee:G3V2N9 Uniprot:G3V2N9
        Length = 166

 Score = 124 (48.7 bits), Expect = 1.8e-07, P = 1.8e-07
 Identities = 22/58 (37%), Positives = 42/58 (72%)

Query:    57 VSEKKRRL-SVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 113
             + +K R L   DQ++ LEK F+ ++  + +++ ++AQ +G+ P+++ VWFQNRRA+W+
Sbjct:    60 IRKKTRTLYRSDQLEELEKIFQEDHYPDSDKRREIAQTVGVTPQRIMVWFQNRRAKWR 117


>UNIPROTKB|F1NYF2 [details] [associations]
            symbol:NKX6-2 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0010454 "negative regulation of cell fate
            commitment" evidence=IEA] [GO:0010455 "positive regulation of cell
            fate commitment" evidence=IEA] [GO:0021912 "regulation of
            transcription from RNA polymerase II promoter involved in spinal
            cord motor neuron fate specification" evidence=IEA] [GO:0021913
            "regulation of transcription from RNA polymerase II promoter
            involved in ventral spinal cord interneuron specification"
            evidence=IEA] [GO:0022010 "central nervous system myelination"
            evidence=IEA] [GO:0031018 "endocrine pancreas development"
            evidence=IEA] [GO:0045686 "negative regulation of glial cell
            differentiation" evidence=IEA] [GO:0045687 "positive regulation of
            glial cell differentiation" evidence=IEA] [GO:0050885
            "neuromuscular process controlling balance" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0030154
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0000976
            GeneTree:ENSGT00680000099625 GO:GO:0010455 GO:GO:0010454
            EMBL:AADN02047157 EMBL:AADN02047158 IPI:IPI00600245
            Ensembl:ENSGALT00000018301 Uniprot:F1NYF2
        Length = 133

 Score = 121 (47.7 bits), Expect = 3.8e-07, P = 3.8e-07
 Identities = 31/87 (35%), Positives = 44/87 (50%)

Query:    65 SVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVL 124
             S  Q+ ALEK FE    L    + +LA  LG+   QV VWFQNRR +W+ K+   +    
Sbjct:    31 SGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWR-KRHAAEMASA 89

Query:   125 KANYDAL--KLNYDSLQHDNEALLKEI 149
             K  +D+   KL   S   D++   K +
Sbjct:    90 KKKHDSETEKLKESSDNEDDDEYNKPL 116


>UNIPROTKB|F8VWZ5 [details] [associations]
            symbol:HLX "H2.0-like homeobox protein" species:9606 "Homo
            sapiens" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
            [GO:0007519 "skeletal muscle tissue development" evidence=IEA]
            [GO:0008284 "positive regulation of cell proliferation"
            evidence=IEA] [GO:0045627 "positive regulation of T-helper 1 cell
            differentiation" evidence=IEA] [GO:0045629 "negative regulation of
            T-helper 2 cell differentiation" evidence=IEA] [GO:0046622
            "positive regulation of organ growth" evidence=IEA] [GO:0048484
            "enteric nervous system development" evidence=IEA] [GO:0048557
            "embryonic digestive tract morphogenesis" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0008284 GO:GO:0001889 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0046622
            GO:GO:0000976 GO:GO:0048484 GO:GO:0045629 GO:GO:0007519
            GO:GO:0045627 GO:GO:0048557 EMBL:AL445423 HGNC:HGNC:4978
            IPI:IPI00643042 ProteinModelPortal:F8VWZ5 SMR:F8VWZ5
            Ensembl:ENST00000427693 ArrayExpress:F8VWZ5 Bgee:F8VWZ5
            Uniprot:F8VWZ5
        Length = 151

 Score = 121 (47.7 bits), Expect = 3.8e-07, P = 3.8e-07
 Identities = 28/57 (49%), Positives = 37/57 (64%)

Query:    68 QVKALEKNFEVENKL-EPERKVKLAQELGLQPRQVAVWFQNRRARW---KTKQLERD 120
             Q K LEK FE++  + +P+RK +LA  LGL   QV VWFQNRR +W   K  Q ++D
Sbjct:    20 QRKGLEKRFEIQKYVTKPDRK-QLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQKD 75


>UNIPROTKB|F1MZR4 [details] [associations]
            symbol:LOC516179 "Uncharacterized protein" species:9913
            "Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0050885
            "neuromuscular process controlling balance" evidence=IEA]
            [GO:0045687 "positive regulation of glial cell differentiation"
            evidence=IEA] [GO:0045686 "negative regulation of glial cell
            differentiation" evidence=IEA] [GO:0031018 "endocrine pancreas
            development" evidence=IEA] [GO:0022010 "central nervous system
            myelination" evidence=IEA] [GO:0021913 "regulation of transcription
            from RNA polymerase II promoter involved in ventral spinal cord
            interneuron specification" evidence=IEA] [GO:0021912 "regulation of
            transcription from RNA polymerase II promoter involved in spinal
            cord motor neuron fate specification" evidence=IEA] [GO:0010455
            "positive regulation of cell fate commitment" evidence=IEA]
            [GO:0010454 "negative regulation of cell fate commitment"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0050885 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0000122 GO:GO:0022010 GO:GO:0031018 GO:GO:0000976
            GeneTree:ENSGT00680000099625 GO:GO:0021913 GO:GO:0045687
            GO:GO:0045686 GO:GO:0010455 GO:GO:0010454 GO:GO:0021912
            EMBL:DAAA02046415 IPI:IPI00838790 Ensembl:ENSBTAT00000045009
            OMA:WDDEKIT Uniprot:F1MZR4
        Length = 151

 Score = 120 (47.3 bits), Expect = 5.0e-07, P = 5.0e-07
 Identities = 31/82 (37%), Positives = 41/82 (50%)

Query:    65 SVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQL-ERDYGV 123
             S  Q  ALEK FE    L    + +LA  LG+   QV VWFQNRR +W+ +   E     
Sbjct:    32 SGQQTFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKRHAAEMASAK 91

Query:   124 LKANYDA--LKLNYDSLQHDNE 143
              K + DA  LK+     + D+E
Sbjct:    92 KKQDSDAEKLKVGGSDAEDDDE 113


>UNIPROTKB|Q05502 [details] [associations]
            symbol:HHEX "Hematopoietically-expressed homeobox protein
            HHEX" species:9031 "Gallus gallus" [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0030154 "cell differentiation" evidence=IEA] [GO:0045892
            "negative regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0043565 "sequence-specific DNA binding" evidence=IDA]
            [GO:0005634 "nucleus" evidence=IC;ISS] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0045892 GO:GO:0030154 GO:GO:0043565 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 eggNOG:NOG252905 EMBL:X64711 IPI:IPI00584628
            PIR:S78063 RefSeq:NP_990583.1 UniGene:Gga.3316
            ProteinModelPortal:Q05502 SMR:Q05502 STRING:Q05502 GeneID:396182
            KEGG:gga:396182 CTD:3087 HOGENOM:HOG000049110 HOVERGEN:HBG055460
            KO:K08024 OrthoDB:EOG4XKV7W NextBio:20816236 Uniprot:Q05502
        Length = 277

 Score = 136 (52.9 bits), Expect = 7.5e-07, P = 7.5e-07
 Identities = 36/120 (30%), Positives = 58/120 (48%)

Query:    63 RLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYG 122
             R S +Q   LEK FE +  L P  + +LA+ L L  RQV  WFQNRRA+W+  + E    
Sbjct:   150 RFSNEQTIELEKKFETQKYLSPPERKRLAKLLQLSERQVKTWFQNRRAKWRRLKQENPQA 209

Query:   123 VLKANYDALKLNYDSLQHDNEALL----KEIRELKSKLNEENTESNISVKQEETIVHETD 178
               K   +    + D     + +       E ++  S  ++E+ ES++S   ++ +  E D
Sbjct:   210 TKKEEAEGTGDHGDPRSEGSPSPAGGGEAEPQDSPSAASQEDPESDVSDDSDQEVDIEGD 269


>ZFIN|ZDB-GENE-980526-299 [details] [associations]
            symbol:hhex "hematopoietically expressed homeobox"
            species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA;ISS] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=IDA] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IDA] [GO:0009953 "dorsal/ventral pattern formation"
            evidence=IMP] [GO:0060217 "hemangioblast cell differentiation"
            evidence=IMP] [GO:0045603 "positive regulation of endothelial cell
            differentiation" evidence=IMP] [GO:0035162 "embryonic hemopoiesis"
            evidence=IMP] [GO:0007507 "heart development" evidence=IMP]
            [GO:0030878 "thyroid gland development" evidence=IMP] [GO:0046620
            "regulation of organ growth" evidence=IMP] [GO:0009952
            "anterior/posterior pattern specification" evidence=ISS]
            [GO:0001889 "liver development" evidence=IMP] [GO:0048565
            "digestive tract development" evidence=IMP] [GO:0007368
            "determination of left/right symmetry" evidence=IMP] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            ZFIN:ZDB-GENE-980526-299 GO:GO:0005634 GO:GO:0007507 GO:GO:0009952
            GO:GO:0043565 GO:GO:0001889 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0000122 GO:GO:0045603 GO:GO:0007368 GO:GO:0009953
            GO:GO:0048565 GO:GO:0035162 eggNOG:NOG252905 GO:GO:0046620
            GO:GO:0030878 CTD:3087 HOVERGEN:HBG055460 KO:K08024
            OrthoDB:EOG4XKV7W EMBL:AF131070 IPI:IPI00485854 RefSeq:NP_571009.1
            UniGene:Dr.79053 HSSP:P22808 ProteinModelPortal:Q9IAV3 SMR:Q9IAV3
            STRING:Q9IAV3 GeneID:30098 KEGG:dre:30098 NextBio:20806580
            Uniprot:Q9IAV3
        Length = 228

 Score = 133 (51.9 bits), Expect = 8.3e-07, P = 8.3e-07
 Identities = 27/56 (48%), Positives = 34/56 (60%)

Query:    63 RLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLE 118
             R S DQ   LEK FE +  L P  + +LA+ L L  RQV  WFQNRRA+W+  + E
Sbjct:   123 RFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQE 178


>ZFIN|ZDB-GENE-031016-2 [details] [associations]
            symbol:hopx "HOP homeobox" species:7955 "Danio rerio"
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0007507 "heart development" evidence=IMP]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0007275 "multicellular
            organismal development" evidence=IEA] InterPro:IPR001356
            InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 ZFIN:ZDB-GENE-031016-2 GO:GO:0005634 GO:GO:0007507
            GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
            SUPFAM:SSF46689 CTD:84525 GeneTree:ENSGT00390000017143
            HOGENOM:HOG000112932 HOVERGEN:HBG051921 EMBL:AF536198 EMBL:BC096856
            EMBL:BC153537 IPI:IPI00498482 RefSeq:NP_937852.1 UniGene:Dr.117691
            UniGene:Dr.151001 ProteinModelPortal:Q8AYB8 SMR:Q8AYB8 PRIDE:Q8AYB8
            Ensembl:ENSDART00000125203 GeneID:386589 KEGG:dre:386589
            NextBio:20813951 Bgee:Q8AYB8 Uniprot:Q8AYB8
        Length = 77

 Score = 118 (46.6 bits), Expect = 8.3e-07, P = 8.3e-07
 Identities = 29/65 (44%), Positives = 38/65 (58%)

Query:    63 RLSVDQVKALEKNFEVENKLEPERKVKL-AQELGLQPRQVAVWFQNRRARW-KTKQLERD 120
             RL+ DQVK LE+NF   +K   E  + L A E GL   Q AVWF+ R A+W K + L  +
Sbjct:    12 RLTEDQVKVLEENFTKVSKHPDETTLMLIAAECGLSEEQTAVWFRMRNAQWRKAEGLPAE 71

Query:   121 YGVLK 125
              G +K
Sbjct:    72 LGSVK 76


>UNIPROTKB|F1NVB2 [details] [associations]
            symbol:TLX3 "T-cell leukemia homeobox protein 3"
            species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0002087 "regulation of respiratory gaseous
            exchange by neurological system process" evidence=IEA] [GO:0007417
            "central nervous system development" evidence=IEA] [GO:0007585
            "respiratory gaseous exchange" evidence=IEA] [GO:0045665 "negative
            regulation of neuron differentiation" evidence=IEA] [GO:0048665
            "neuron fate specification" evidence=IEA] [GO:0001764 "neuron
            migration" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104454 EMBL:AADN02035942 IPI:IPI00814284
            Ensembl:ENSGALT00000003427 OMA:LAFPIAR ArrayExpress:F1NVB2
            Uniprot:F1NVB2
        Length = 136

 Score = 117 (46.2 bits), Expect = 1.1e-06, P = 1.1e-06
 Identities = 31/90 (34%), Positives = 48/90 (53%)

Query:    60 KKRRLSVDQVKA--LEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQL 117
             KK R S  +V+   LEK F  +  L    +  LA+ L +   QV  WFQNRR +W+ +  
Sbjct:    12 KKPRTSFSRVQICELEKRFHRQKYLASAERAALAKSLKMTDAQVKTWFQNRRTKWRRQTA 71

Query:   118 E-RDYGVLKANYDALKLNYDSLQHD-NEAL 145
             E R+    +A+   L+L +D+ Q   NE++
Sbjct:    72 EEREAERQQASRLMLQLQHDAFQKSLNESI 101


>UNIPROTKB|H9L184 [details] [associations]
            symbol:Gga.48067 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0002011
            "morphogenesis of an epithelial sheet" evidence=IEA] [GO:0008283
            "cell proliferation" evidence=IEA] [GO:0009952 "anterior/posterior
            pattern specification" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0048103 "somatic stem cell division"
            evidence=IEA] [GO:0048536 "spleen development" evidence=IEA]
            [GO:0048539 "bone marrow development" evidence=IEA] [GO:0048704
            "embryonic skeletal system morphogenesis" evidence=IEA] [GO:0060216
            "definitive hemopoiesis" evidence=IEA] [GO:0060218 "hematopoietic
            stem cell differentiation" evidence=IEA] [GO:2000738 "positive
            regulation of stem cell differentiation" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104090 EMBL:AADN02014570
            Ensembl:ENSGALT00000029853 OMA:MANTIPP Uniprot:H9L184
        Length = 102

 Score = 116 (45.9 bits), Expect = 1.4e-06, P = 1.4e-06
 Identities = 22/46 (47%), Positives = 28/46 (60%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 113
             QV  LEK F     L   R+V++A  L L  RQ+ +WFQNRR +WK
Sbjct:    21 QVLELEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRMKWK 66


>WB|WBGene00000434 [details] [associations]
            symbol:ceh-9 species:6239 "Caenorhabditis elegans"
            [GO:0000976 "transcription regulatory region sequence-specific DNA
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0000976 GeneTree:ENSGT00700000104206 EMBL:FO081483
            EMBL:X52811 PIR:S13129 RefSeq:NP_001021797.1 UniGene:Cel.30778
            ProteinModelPortal:P56407 SMR:P56407 EnsemblMetazoa:Y65B4BR.9
            GeneID:267057 KEGG:cel:CELE_Y65B4BR.9 UCSC:Y65B4BR.9 CTD:267057
            WormBase:Y65B4BR.9 eggNOG:NOG237842 InParanoid:P56407 OMA:FSGKQVF
            NextBio:953494 Uniprot:P56407
        Length = 147

 Score = 116 (45.9 bits), Expect = 1.4e-06, P = 1.4e-06
 Identities = 26/63 (41%), Positives = 36/63 (57%)

Query:    60 KKRR--LSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQL 117
             KK R   S  QV  LEK FE +  L    + +LA+ L +   QV +WFQNRR +WK  + 
Sbjct:    71 KKARTTFSGKQVFELEKQFEAKKYLSSSDRSELAKRLDVTETQVKIWFQNRRTKWKKIES 130

Query:   118 ERD 120
             E++
Sbjct:   131 EKE 133


>UNIPROTKB|F1NXB2 [details] [associations]
            symbol:HHEX "Hematopoietically-expressed homeobox protein
            HHEX" species:9031 "Gallus gallus" [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GeneTree:ENSGT00680000099625 IPI:IPI00584628
            EMBL:AADN02046631 Ensembl:ENSGALT00000010965 Uniprot:F1NXB2
        Length = 277

 Score = 133 (51.9 bits), Expect = 1.7e-06, P = 1.7e-06
 Identities = 36/120 (30%), Positives = 57/120 (47%)

Query:    63 RLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYG 122
             R S +Q   LEK FE +  L P  + +LA+ L L  RQV  WFQNRRA+W+  + E    
Sbjct:   150 RFSNEQTIELEKKFETQKYLSPPERKRLAKLLQLSERQVKTWFQNRRAKWRRLKQENPQA 209

Query:   123 VLKANYDALKLNYDSLQHDNEALL----KEIRELKSKLNEENTESNISVKQEETIVHETD 178
               K   +    + D     + +       E  +  S  ++E+ ES++S   ++ +  E D
Sbjct:   210 TKKEEAEGTGDHGDPRPEGSPSPAGGGEAEPXDSPSAASQEDPESDVSDDSDQEVDIEGD 269


>UNIPROTKB|H0YHX3 [details] [associations]
            symbol:HOXA4 "Homeobox protein Hox-A4" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            EMBL:AC004080 HGNC:HGNC:5105 Ensembl:ENST00000511914 Uniprot:H0YHX3
        Length = 140

 Score = 115 (45.5 bits), Expect = 1.8e-06, P = 1.8e-06
 Identities = 22/46 (47%), Positives = 28/46 (60%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 113
             QV  LEK F     L   R++++A  L L  RQV +WFQNRR +WK
Sbjct:    46 QVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWK 91


>UNIPROTKB|F6VMK5 [details] [associations]
            symbol:NKX3-1 "Uncharacterized protein" species:9796 "Equus
            caballus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=ISS] [GO:0000988 "protein
            binding transcription factor activity" evidence=ISS] [GO:0001047
            "core promoter binding" evidence=ISS] [GO:0001934 "positive
            regulation of protein phosphorylation" evidence=ISS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISS] [GO:0004882 "androgen receptor activity"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006919
            "activation of cysteine-type endopeptidase activity involved in
            apoptotic process" evidence=ISS] [GO:0007431 "salivary gland
            development" evidence=ISS] [GO:0008284 "positive regulation of cell
            proliferation" evidence=ISS] [GO:0008285 "negative regulation of
            cell proliferation" evidence=ISS] [GO:0010628 "positive regulation
            of gene expression" evidence=ISS] [GO:0010942 "positive regulation
            of cell death" evidence=ISS] [GO:0014068 "positive regulation of
            phosphatidylinositol 3-kinase cascade" evidence=ISS] [GO:0030284
            "estrogen receptor activity" evidence=ISS] [GO:0030295 "protein
            kinase activator activity" evidence=ISS] [GO:0030331 "estrogen
            receptor binding" evidence=ISS] [GO:0030521 "androgen receptor
            signaling pathway" evidence=ISS] [GO:0033574 "response to
            testosterone stimulus" evidence=ISS] [GO:0043280 "positive
            regulation of cysteine-type endopeptidase activity involved in
            apoptotic process" evidence=ISS] [GO:0043491 "protein kinase B
            signaling cascade" evidence=ISS] [GO:0043569 "negative regulation
            of insulin-like growth factor receptor signaling pathway"
            evidence=ISS] [GO:0043621 "protein self-association" evidence=ISS]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=ISS] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0045931 "positive regulation of
            mitotic cell cycle" evidence=ISS] [GO:0045944 "positive regulation
            of transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0048754 "branching morphogenesis of an epithelial tube"
            evidence=ISS] [GO:0050680 "negative regulation of epithelial cell
            proliferation" evidence=ISS] [GO:0051781 "positive regulation of
            cell division" evidence=ISS] [GO:0060442 "branching involved in
            prostate gland morphogenesis" evidence=ISS] [GO:0060664 "epithelial
            cell proliferation involved in salivary gland morphogenesis"
            evidence=ISS] [GO:0060770 "negative regulation of epithelial cell
            proliferation involved in prostate gland development" evidence=ISS]
            [GO:0071383 "cellular response to steroid hormone stimulus"
            evidence=ISS] [GO:0071899 "negative regulation of estrogen receptor
            binding" evidence=ISS] [GO:2000836 "positive regulation of androgen
            secretion" evidence=ISS] [GO:2001022 "positive regulation of
            response to DNA damage stimulus" evidence=ISS] [GO:2001244
            "positive regulation of intrinsic apoptotic signaling pathway"
            evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0045892 GO:GO:0007507
            GO:GO:0045931 GO:GO:0008284 GO:GO:0051781 GO:GO:0045944
            GO:GO:0071456 GO:GO:0014068 GO:GO:0030295 GO:GO:0043621
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0008584 GO:GO:0001756 GO:GO:0006919 GO:GO:0035690
            GO:GO:0010942 GO:GO:0060037 GO:GO:0033574 GO:GO:0001047
            GO:GO:0008656 GO:GO:0043491 GO:GO:0000976 GO:GO:0004882
            GO:GO:0071347 GO:GO:0071356 GO:GO:0030331 GO:GO:0000983
            GO:GO:0060770 GO:GO:0001656 GO:GO:2001244 GO:GO:0043569
            GO:GO:0048754 GeneTree:ENSGT00700000104206 GO:GO:0045930
            GO:GO:2001022 GO:GO:0060442 GO:GO:0071850 GO:GO:0000988
            GO:GO:0030284 GO:GO:0060664 GO:GO:0071899 GO:GO:0035907
            GO:GO:2000836 OMA:YCLGGWN Ensembl:ENSECAT00000001320 Uniprot:F6VMK5
        Length = 142

 Score = 115 (45.5 bits), Expect = 1.8e-06, P = 1.8e-06
 Identities = 31/78 (39%), Positives = 42/78 (53%)

Query:    59 EKKRR--LSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQ 116
             +K+ R   S  QV  LE+ F  +  L    +  LA+ L L   QV +WFQNRR + K KQ
Sbjct:    32 QKRSRAAFSHTQVIELERKFSRQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTKRKQ 91

Query:   117 LERDYGVLK--ANYDALK 132
             L  D G L+  ++  ALK
Sbjct:    92 LSSDLGNLEKPSSLPALK 109


>RGD|1586210 [details] [associations]
            symbol:Hoxc4 "homeo box C4" species:10116 "Rattus norvegicus"
            [GO:0001501 "skeletal system development" evidence=ISO] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA;ISO]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0048562 "embryonic organ morphogenesis" evidence=IEA;ISO]
            [GO:0051216 "cartilage development" evidence=IEA;ISO] [GO:0071837
            "HMG box domain binding" evidence=IEA;ISO] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1586210
            GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 eggNOG:NOG305812 EMBL:M37567 IPI:IPI00195532
            PIR:C43559 UniGene:Rn.12051 ProteinModelPortal:P18865 SMR:P18865
            STRING:P18865 UCSC:RGD:1586210 Genevestigator:P18865 Uniprot:P18865
        Length = 76

 Score = 115 (45.5 bits), Expect = 1.8e-06, P = 1.8e-06
 Identities = 21/46 (45%), Positives = 28/46 (60%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 113
             QV  LEK F     L   R++++A  L L  RQ+ +WFQNRR +WK
Sbjct:    22 QVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWK 67


>UNIPROTKB|P18865 [details] [associations]
            symbol:Hoxc4 "Homeobox protein Hox-C4" species:10116
            "Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1586210
            GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 eggNOG:NOG305812 EMBL:M37567 IPI:IPI00195532
            PIR:C43559 UniGene:Rn.12051 ProteinModelPortal:P18865 SMR:P18865
            STRING:P18865 UCSC:RGD:1586210 Genevestigator:P18865 Uniprot:P18865
        Length = 76

 Score = 115 (45.5 bits), Expect = 1.8e-06, P = 1.8e-06
 Identities = 21/46 (45%), Positives = 28/46 (60%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 113
             QV  LEK F     L   R++++A  L L  RQ+ +WFQNRR +WK
Sbjct:    22 QVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWK 67


>UNIPROTKB|F1NES3 [details] [associations]
            symbol:HHEX "Hematopoietically-expressed homeobox protein
            HHEX" species:9031 "Gallus gallus" [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
            [GO:0001701 "in utero embryonic development" evidence=IEA]
            [GO:0002573 "myeloid leukocyte differentiation" evidence=IEA]
            [GO:0003682 "chromatin binding" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
            [GO:0007165 "signal transduction" evidence=IEA] [GO:0007492
            "endoderm development" evidence=IEA] [GO:0008190 "eukaryotic
            initiation factor 4E binding" evidence=IEA] [GO:0008301 "DNA
            binding, bending" evidence=IEA] [GO:0016973 "poly(A)+ mRNA export
            from nucleus" evidence=IEA] [GO:0022027 "interkinetic nuclear
            migration" evidence=IEA] [GO:0030177 "positive regulation of Wnt
            receptor signaling pathway" evidence=IEA] [GO:0030183 "B cell
            differentiation" evidence=IEA] [GO:0030878 "thyroid gland
            development" evidence=IEA] [GO:0031016 "pancreas development"
            evidence=IEA] [GO:0032993 "protein-DNA complex" evidence=IEA]
            [GO:0034504 "protein localization to nucleus" evidence=IEA]
            [GO:0035050 "embryonic heart tube development" evidence=IEA]
            [GO:0035264 "multicellular organism growth" evidence=IEA]
            [GO:0042127 "regulation of cell proliferation" evidence=IEA]
            [GO:0042803 "protein homodimerization activity" evidence=IEA]
            [GO:0044212 "transcription regulatory region DNA binding"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0048568
            "embryonic organ development" evidence=IEA] [GO:0048853 "forebrain
            morphogenesis" evidence=IEA] [GO:0060431 "primary lung bud
            formation" evidence=IEA] [GO:0061009 "common bile duct development"
            evidence=IEA] [GO:0061010 "gall bladder development" evidence=IEA]
            [GO:0061011 "hepatic duct development" evidence=IEA] [GO:0061017
            "hepatoblast differentiation" evidence=IEA] [GO:0070365 "hepatocyte
            differentiation" evidence=IEA] [GO:0070491 "repressing
            transcription factor binding" evidence=IEA] [GO:0071103 "DNA
            conformation change" evidence=IEA] [GO:0071837 "HMG box domain
            binding" evidence=IEA] [GO:0090009 "primitive streak formation"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0007165
            GO:GO:0008283 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
            GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0000122 GO:GO:0008301
            GO:GO:0044212 GO:GO:0007049 GO:GO:0030177 GO:GO:0034504
            GO:GO:0032993 GO:GO:0016973 GeneTree:ENSGT00680000099625
            OMA:DNSCDQR GO:GO:0071103 EMBL:AADN02046631 IPI:IPI00820051
            Ensembl:ENSGALT00000039741 Uniprot:F1NES3
        Length = 285

 Score = 133 (51.9 bits), Expect = 1.8e-06, P = 1.8e-06
 Identities = 36/120 (30%), Positives = 57/120 (47%)

Query:    63 RLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYG 122
             R S +Q   LEK FE +  L P  + +LA+ L L  RQV  WFQNRRA+W+  + E    
Sbjct:   159 RFSNEQTIELEKKFETQKYLSPPERKRLAKLLQLSERQVKTWFQNRRAKWRRLKQENPQA 218

Query:   123 VLKANYDALKLNYDSLQHDNEALL----KEIRELKSKLNEENTESNISVKQEETIVHETD 178
               K   +    + D     + +       E  +  S  ++E+ ES++S   ++ +  E D
Sbjct:   219 TKKEEAEGTGDHGDPRPEGSPSPAGGGEAEPXDSPSAASQEDPESDVSDDSDQEVDIEGD 278


>UNIPROTKB|F1P4U9 [details] [associations]
            symbol:HOXD8 "Homeobox protein Hox-D8" species:9031 "Gallus
            gallus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
            GeneTree:ENSGT00700000104054 IPI:IPI00576774 EMBL:AADN02020025
            EMBL:AADN02020026 EMBL:AADN02020027 EMBL:AADN02020028
            EMBL:AADN02020029 EMBL:AADN02020030 Ensembl:ENSGALT00000015083
            ArrayExpress:F1P4U9 Uniprot:F1P4U9
        Length = 148

 Score = 114 (45.2 bits), Expect = 2.3e-06, P = 2.3e-06
 Identities = 23/53 (43%), Positives = 33/53 (62%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERD 120
             Q   LEK F     L  +R+++++  LGL  RQV +WFQNRR +WK K+  +D
Sbjct:    66 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-KENNKD 117


>UNIPROTKB|F1PRX2 [details] [associations]
            symbol:NKX3-1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=ISS] [GO:0010942 "positive
            regulation of cell death" evidence=ISS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISS] [GO:0043491 "protein kinase B signaling cascade"
            evidence=ISS] [GO:0004882 "androgen receptor activity"
            evidence=ISS] [GO:0071383 "cellular response to steroid hormone
            stimulus" evidence=ISS] [GO:2000836 "positive regulation of
            androgen secretion" evidence=ISS] [GO:2001022 "positive regulation
            of response to DNA damage stimulus" evidence=ISS] [GO:0030521
            "androgen receptor signaling pathway" evidence=ISS] [GO:0014068
            "positive regulation of phosphatidylinositol 3-kinase cascade"
            evidence=ISS] [GO:0008284 "positive regulation of cell
            proliferation" evidence=ISS] [GO:0043621 "protein self-association"
            evidence=ISS] [GO:0030331 "estrogen receptor binding" evidence=ISS]
            [GO:0030284 "estrogen receptor activity" evidence=ISS] [GO:0000976
            "transcription regulatory region sequence-specific DNA binding"
            evidence=ISS] [GO:0071899 "negative regulation of estrogen receptor
            binding" evidence=ISS] [GO:0051781 "positive regulation of cell
            division" evidence=ISS] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0045931 "positive regulation of mitotic cell cycle"
            evidence=ISS] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:2001244 "positive regulation of
            intrinsic apoptotic signaling pathway" evidence=ISS] [GO:0008285
            "negative regulation of cell proliferation" evidence=ISS]
            [GO:0006919 "activation of cysteine-type endopeptidase activity
            involved in apoptotic process" evidence=ISS] [GO:0007431 "salivary
            gland development" evidence=ISS] [GO:0005634 "nucleus"
            evidence=ISS] [GO:0060770 "negative regulation of epithelial cell
            proliferation involved in prostate gland development" evidence=ISS]
            [GO:0060664 "epithelial cell proliferation involved in salivary
            gland morphogenesis" evidence=ISS] [GO:0060442 "branching involved
            in prostate gland morphogenesis" evidence=ISS] [GO:0050680
            "negative regulation of epithelial cell proliferation"
            evidence=ISS] [GO:0048754 "branching morphogenesis of an epithelial
            tube" evidence=ISS] [GO:0043569 "negative regulation of
            insulin-like growth factor receptor signaling pathway"
            evidence=ISS] [GO:0033574 "response to testosterone stimulus"
            evidence=ISS] [GO:0043280 "positive regulation of cysteine-type
            endopeptidase activity involved in apoptotic process" evidence=ISS]
            [GO:0030295 "protein kinase activator activity" evidence=ISS]
            [GO:0001047 "core promoter binding" evidence=ISS] [GO:0000988
            "protein binding transcription factor activity" evidence=ISS]
            [GO:0010628 "positive regulation of gene expression" evidence=ISS]
            [GO:0001934 "positive regulation of protein phosphorylation"
            evidence=ISS] [GO:0097162 "MADS box domain binding" evidence=IEA]
            [GO:0071850 "mitotic cell cycle arrest" evidence=IEA] [GO:0071456
            "cellular response to hypoxia" evidence=IEA] [GO:0071356 "cellular
            response to tumor necrosis factor" evidence=IEA] [GO:0071347
            "cellular response to interleukin-1" evidence=IEA] [GO:0060037
            "pharyngeal system development" evidence=IEA] [GO:0045930 "negative
            regulation of mitotic cell cycle" evidence=IEA] [GO:0042826
            "histone deacetylase binding" evidence=IEA] [GO:0035907 "dorsal
            aorta development" evidence=IEA] [GO:0035690 "cellular response to
            drug" evidence=IEA] [GO:0008656 "cysteine-type endopeptidase
            activator activity involved in apoptotic process" evidence=IEA]
            [GO:0008584 "male gonad development" evidence=IEA] [GO:0008134
            "transcription factor binding" evidence=IEA] [GO:0007507 "heart
            development" evidence=IEA] [GO:0001756 "somitogenesis"
            evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
            [GO:0000983 "RNA polymerase II core promoter sequence-specific DNA
            binding transcription factor activity" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0045892 GO:GO:0007507 GO:GO:0045931
            GO:GO:0008284 GO:GO:0051781 GO:GO:0045944 GO:GO:0071456
            GO:GO:0014068 GO:GO:0030295 GO:GO:0043621 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0008584
            GO:GO:0001756 GO:GO:0006919 GO:GO:0035690 GO:GO:0010942
            GO:GO:0060037 GO:GO:0033574 GO:GO:0001047 GO:GO:0008656
            GO:GO:0043491 GO:GO:0000976 GO:GO:0004882 GO:GO:0071347
            GO:GO:0071356 GO:GO:0030331 GO:GO:0000983 GO:GO:0060770
            GO:GO:0001656 GO:GO:2001244 GO:GO:0043569 GO:GO:0048754
            GeneTree:ENSGT00700000104206 GO:GO:0045930 GO:GO:2001022
            GO:GO:0060442 GO:GO:0071850 GO:GO:0000988 GO:GO:0030284
            GO:GO:0060664 GO:GO:0071899 GO:GO:0035907 GO:GO:2000836
            EMBL:AAEX03014362 Ensembl:ENSCAFT00000014483 OMA:YCLGGWN
            Uniprot:F1PRX2
        Length = 140

 Score = 114 (45.2 bits), Expect = 2.3e-06, P = 2.3e-06
 Identities = 31/78 (39%), Positives = 42/78 (53%)

Query:    59 EKKRR--LSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQ 116
             +K+ R   S  QV  LE+ F  +  L    +  LA+ L L   QV +WFQNRR + K KQ
Sbjct:    30 QKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTKRKQ 89

Query:   117 LERDYGVLK--ANYDALK 132
             L  D G L+  ++  ALK
Sbjct:    90 LTSDLGDLEKHSSLPALK 107


>UNIPROTKB|I3L383 [details] [associations]
            symbol:HOXB8 "Homeobox protein Hox-B8" species:9606 "Homo
            sapiens" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0000976 EMBL:AC103702 HGNC:HGNC:5119 Ensembl:ENST00000498634
            Uniprot:I3L383
        Length = 128

 Score = 114 (45.2 bits), Expect = 2.3e-06, P = 2.3e-06
 Identities = 23/53 (43%), Positives = 33/53 (62%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERD 120
             Q   LEK F     L  +R+++++  LGL  RQV +WFQNRR +WK K+  +D
Sbjct:     6 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-KENNKD 57


>UNIPROTKB|D2H028 [details] [associations]
            symbol:PANDA_002743 "Putative uncharacterized protein"
            species:9646 "Ailuropoda melanoleuca" [GO:0000976 "transcription
            regulatory region sequence-specific DNA binding" evidence=ISS]
            [GO:0000988 "protein binding transcription factor activity"
            evidence=ISS] [GO:0001047 "core promoter binding" evidence=ISS]
            [GO:0001934 "positive regulation of protein phosphorylation"
            evidence=ISS] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0004882 "androgen
            receptor activity" evidence=ISS] [GO:0005634 "nucleus"
            evidence=ISS] [GO:0006919 "activation of cysteine-type
            endopeptidase activity involved in apoptotic process" evidence=ISS]
            [GO:0007431 "salivary gland development" evidence=ISS] [GO:0008284
            "positive regulation of cell proliferation" evidence=ISS]
            [GO:0008285 "negative regulation of cell proliferation"
            evidence=ISS] [GO:0010628 "positive regulation of gene expression"
            evidence=ISS] [GO:0010942 "positive regulation of cell death"
            evidence=ISS] [GO:0014068 "positive regulation of
            phosphatidylinositol 3-kinase cascade" evidence=ISS] [GO:0030284
            "estrogen receptor activity" evidence=ISS] [GO:0030295 "protein
            kinase activator activity" evidence=ISS] [GO:0030331 "estrogen
            receptor binding" evidence=ISS] [GO:0030521 "androgen receptor
            signaling pathway" evidence=ISS] [GO:0033574 "response to
            testosterone stimulus" evidence=ISS] [GO:0043280 "positive
            regulation of cysteine-type endopeptidase activity involved in
            apoptotic process" evidence=ISS] [GO:0043491 "protein kinase B
            signaling cascade" evidence=ISS] [GO:0043569 "negative regulation
            of insulin-like growth factor receptor signaling pathway"
            evidence=ISS] [GO:0043621 "protein self-association" evidence=ISS]
            [GO:0045860 "positive regulation of protein kinase activity"
            evidence=ISS] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=ISS] [GO:0045931 "positive
            regulation of mitotic cell cycle" evidence=ISS] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=ISS] [GO:0048754 "branching morphogenesis of an
            epithelial tube" evidence=ISS] [GO:0050680 "negative regulation of
            epithelial cell proliferation" evidence=ISS] [GO:0051781 "positive
            regulation of cell division" evidence=ISS] [GO:0060442 "branching
            involved in prostate gland morphogenesis" evidence=ISS] [GO:0060664
            "epithelial cell proliferation involved in salivary gland
            morphogenesis" evidence=ISS] [GO:0060770 "negative regulation of
            epithelial cell proliferation involved in prostate gland
            development" evidence=ISS] [GO:0071383 "cellular response to
            steroid hormone stimulus" evidence=ISS] [GO:0071899 "negative
            regulation of estrogen receptor binding" evidence=ISS] [GO:2000836
            "positive regulation of androgen secretion" evidence=ISS]
            [GO:2001022 "positive regulation of response to DNA damage
            stimulus" evidence=ISS] [GO:2001244 "positive regulation of
            intrinsic apoptotic signaling pathway" evidence=ISS]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0045892 GO:GO:0045931 GO:GO:0008284
            GO:GO:0051781 GO:GO:0045944 GO:GO:0014068 GO:GO:0030295
            GO:GO:0043621 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0006919 GO:GO:0010942 GO:GO:0033574
            GO:GO:0001047 GO:GO:0043491 GO:GO:0000976 GO:GO:0004882
            GO:GO:0030331 GO:GO:0060770 GO:GO:2001244 GO:GO:0043569
            GO:GO:0048754 GO:GO:2001022 GO:GO:0060442 GO:GO:0000988
            GO:GO:0030284 GO:GO:0060664 HOGENOM:HOG000231923 GO:GO:0071899
            GO:GO:2000836 EMBL:GL192401 Uniprot:D2H028
        Length = 140

 Score = 114 (45.2 bits), Expect = 2.3e-06, P = 2.3e-06
 Identities = 31/78 (39%), Positives = 42/78 (53%)

Query:    59 EKKRR--LSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQ 116
             +K+ R   S  QV  LE+ F  +  L    +  LA+ L L   QV +WFQNRR + K KQ
Sbjct:    30 QKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTKRKQ 89

Query:   117 LERDYGVLK--ANYDALK 132
             L  D G L+  ++  ALK
Sbjct:    90 LTSDLGDLEKHSSLPALK 107


>RGD|1586211 [details] [associations]
            symbol:Hoxb8 "homeo box B8" species:10116 "Rattus norvegicus"
            [GO:0000976 "transcription regulatory region sequence-specific DNA
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0007625 "grooming behavior" evidence=ISO]
            [GO:0008344 "adult locomotory behavior" evidence=ISO] [GO:0009952
            "anterior/posterior pattern specification" evidence=ISO]
            [GO:0019233 "sensory perception of pain" evidence=ISO] [GO:0021516
            "dorsal spinal cord development" evidence=ISO] [GO:0045638
            "negative regulation of myeloid cell differentiation"
            evidence=ISO;ISS] [GO:0048704 "embryonic skeletal system
            morphogenesis" evidence=ISO] [GO:0048705 "skeletal system
            morphogenesis" evidence=ISO] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            RGD:1586211 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0000976 GO:GO:0045638 eggNOG:NOG314669 EMBL:M37565
            IPI:IPI00476117 PIR:A43559 UniGene:Rn.231433
            ProteinModelPortal:P18863 SMR:P18863 STRING:P18863 UCSC:RGD:1586211
            Genevestigator:P18863 Uniprot:P18863
        Length = 92

 Score = 114 (45.2 bits), Expect = 2.3e-06, P = 2.3e-06
 Identities = 23/53 (43%), Positives = 33/53 (62%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERD 120
             Q   LEK F     L  +R+++++  LGL  RQV +WFQNRR +WK K+  +D
Sbjct:    22 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-KENNKD 73


>RGD|1595784 [details] [associations]
            symbol:Hoxc9 "homeobox C9" species:10116 "Rattus norvegicus"
            [GO:0000976 "transcription regulatory region sequence-specific DNA
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0048704 "embryonic skeletal system
            morphogenesis" evidence=IEA;ISO] [GO:0048706 "embryonic skeletal
            system development" evidence=ISO] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 RGD:1595784 GO:GO:0007275
            GO:GO:0005634 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
            eggNOG:NOG314669 EMBL:S76301 EMBL:M37568 IPI:IPI01016344 PIR:D43559
            UniGene:Rn.91646 ProteinModelPortal:P18866 SMR:P18866 STRING:P18866
            UCSC:RGD:1595784 HOVERGEN:HBG107057 Genevestigator:P18866
            Uniprot:P18866
        Length = 108

 Score = 114 (45.2 bits), Expect = 2.3e-06, P = 2.3e-06
 Identities = 23/53 (43%), Positives = 33/53 (62%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERD 120
             Q   LEK F     L  +R+++++  LGL  RQV +WFQNRR +WK K+  +D
Sbjct:    26 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-KENNKD 77


>UNIPROTKB|P18866 [details] [associations]
            symbol:Hoxc8 "Homeobox protein Hox-C8" species:10116
            "Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            RGD:1595784 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0000976 eggNOG:NOG314669 EMBL:S76301 EMBL:M37568
            IPI:IPI01016344 PIR:D43559 UniGene:Rn.91646
            ProteinModelPortal:P18866 SMR:P18866 STRING:P18866 UCSC:RGD:1595784
            HOVERGEN:HBG107057 Genevestigator:P18866 Uniprot:P18866
        Length = 108

 Score = 114 (45.2 bits), Expect = 2.3e-06, P = 2.3e-06
 Identities = 23/53 (43%), Positives = 33/53 (62%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERD 120
             Q   LEK F     L  +R+++++  LGL  RQV +WFQNRR +WK K+  +D
Sbjct:    26 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-KENNKD 77


>UNIPROTKB|P09078 [details] [associations]
            symbol:HOXB8 "Homeobox protein Hox-B8" species:9823 "Sus
            scrofa" [GO:0045638 "negative regulation of myeloid cell
            differentiation" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0000976 "transcription regulatory
            region sequence-specific DNA binding" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
            GO:GO:0005634 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
            GO:GO:0045638 EMBL:X06668 ProteinModelPortal:P09078 SMR:P09078
            Uniprot:P09078
        Length = 93

 Score = 112 (44.5 bits), Expect = 3.8e-06, P = 3.8e-06
 Identities = 20/49 (40%), Positives = 31/49 (63%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQ 116
             Q   LEK F+    L  +R ++++  LGL  RQ+ +WFQNRR +WK ++
Sbjct:    18 QTLELEKEFQCNPYLTCKRWIEVSHALGLTERQIKIWFQNRRMKWKKRE 66


>UNIPROTKB|A8MWF9 [details] [associations]
            symbol:MEOX1 "Homeobox protein MOX-1" species:9606 "Homo
            sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0001757 "somite specification" evidence=IEA] [GO:0003682
            "chromatin binding" evidence=IEA] [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0071837 "HMG box domain
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
            GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0001757 EMBL:AC068675 EMBL:AC004149
            RefSeq:NP_001035091.1 UniGene:Hs.438 DNASU:4222 GeneID:4222
            KEGG:hsa:4222 CTD:4222 HGNC:HGNC:7013 PharmGKB:PA30747
            HOGENOM:HOG000230987 KO:K09322 GenomeRNAi:4222 NextBio:16659
            IPI:IPI00744956 ProteinModelPortal:A8MWF9 SMR:A8MWF9 STRING:A8MWF9
            Ensembl:ENST00000393661 HOVERGEN:HBG100054 ArrayExpress:A8MWF9
            Bgee:A8MWF9 Uniprot:A8MWF9
        Length = 139

 Score = 111 (44.1 bits), Expect = 4.9e-06, P = 4.9e-06
 Identities = 22/55 (40%), Positives = 33/55 (60%)

Query:    59 EKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 113
             +++   + +Q++ LE  F   N L   R+ ++A  L L  RQV VWFQNRR +WK
Sbjct:    58 KERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQVKVWFQNRRMKWK 112


>UNIPROTKB|P14838 [details] [associations]
            symbol:HOXB5 "Homeobox protein Hox-B5" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
            SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104189
            eggNOG:NOG305812 EMBL:X16846 IPI:IPI00570687 PIR:S08302
            UniGene:Gga.22931 ProteinModelPortal:P14838 SMR:P14838
            STRING:P14838 Ensembl:ENSGALT00000029223 ArrayExpress:P14838
            Uniprot:P14838
        Length = 82

 Score = 110 (43.8 bits), Expect = 6.3e-06, P = 6.3e-06
 Identities = 20/46 (43%), Positives = 27/46 (58%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 113
             Q   LEK F     L   R++++A  L L  RQ+ +WFQNRR +WK
Sbjct:    18 QTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWK 63


>UNIPROTKB|P14839 [details] [associations]
            symbol:HOXB6 "Homeobox protein Hox-B6" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
            SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 EMBL:X16847 IPI:IPI00589688
            PIR:S08303 ProteinModelPortal:P14839 SMR:P14839 Uniprot:P14839
        Length = 84

 Score = 110 (43.8 bits), Expect = 6.3e-06, P = 6.3e-06
 Identities = 20/46 (43%), Positives = 27/46 (58%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 113
             Q   LEK F     L   R++++A  L L  RQ+ +WFQNRR +WK
Sbjct:    18 QTLELEKEFHFNRYLTRRRRIEIAHSLCLTERQIKIWFQNRRMKWK 63


>WB|WBGene00000430 [details] [associations]
            symbol:ceh-5 species:6239 "Caenorhabditis elegans"
            [GO:0000976 "transcription regulatory region sequence-specific DNA
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0000976 EMBL:Z81036 PIR:S05706 PIR:T19335 RefSeq:NP_492586.2
            ProteinModelPortal:P20269 SMR:P20269 EnsemblMetazoa:C16C2.1
            GeneID:191616 KEGG:cel:CELE_C16C2.1 UCSC:C16C2.1 CTD:191616
            WormBase:C16C2.1 eggNOG:NOG309408 GeneTree:ENSGT00680000099870
            HOGENOM:HOG000017392 InParanoid:P20269 OMA:QNYWTAA NextBio:949690
            Uniprot:P20269
        Length = 134

 Score = 110 (43.8 bits), Expect = 6.3e-06, P = 6.3e-06
 Identities = 30/76 (39%), Positives = 40/76 (52%)

Query:    67 DQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDY---GV 123
             +Q++ LE++F     L    + KLA+ LGL   QV VWFQNRR + K K   RD      
Sbjct:    45 EQLEKLEESFNTSGYLSGSTRAKLAESLGLSDNQVKVWFQNRRTKQK-KIDSRDPIKPET 103

Query:   124 LKA--NYDALKLNYDS 137
             LK   NY  +  NY +
Sbjct:   104 LKPAENYQNVYQNYQN 119


>UNIPROTKB|F1NXJ2 [details] [associations]
            symbol:DBX2 "Homeobox protein DBX2" species:9031 "Gallus
            gallus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0000976 GeneTree:ENSGT00700000104097 OMA:HEMRITL
            EMBL:AADN02010005 EMBL:AADN02010006 IPI:IPI00582102
            Ensembl:ENSGALT00000038776 ArrayExpress:F1NXJ2 Uniprot:F1NXJ2
        Length = 258

 Score = 127 (49.8 bits), Expect = 7.0e-06, P = 7.0e-06
 Identities = 28/71 (39%), Positives = 42/71 (59%)

Query:    65 SVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVL 124
             S DQ KALEK F+ +  +    + KLA  LGL+  QV +WFQNRR +W+  + E++    
Sbjct:   118 SEDQRKALEKMFQKQKYISKTDRKKLAINLGLKESQVKIWFQNRRMKWRNSK-EKEVLSN 176

Query:   125 KANYDALKLNY 135
             +   + L+ NY
Sbjct:   177 RCLQEGLQENY 187


>MGI|MGI:97352 [details] [associations]
            symbol:Nkx3-1 "NK-3 transcription factor, locus 1
            (Drosophila)" species:10090 "Mus musculus" [GO:0000976
            "transcription regulatory region sequence-specific DNA binding"
            evidence=ISO] [GO:0000983 "RNA polymerase II core promoter
            sequence-specific DNA binding transcription factor activity"
            evidence=IMP] [GO:0000988 "protein binding transcription factor
            activity" evidence=ISO] [GO:0001047 "core promoter binding"
            evidence=ISO] [GO:0001655 "urogenital system development"
            evidence=TAS] [GO:0001934 "positive regulation of protein
            phosphorylation" evidence=ISO] [GO:0003677 "DNA binding"
            evidence=IDA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISO;IDA] [GO:0004882
            "androgen receptor activity" evidence=ISO] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005622 "intracellular"
            evidence=ISO;IDA] [GO:0005634 "nucleus" evidence=ISO;IDA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0006919 "activation of cysteine-type
            endopeptidase activity involved in apoptotic process" evidence=ISO]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0007431 "salivary gland development" evidence=IMP] [GO:0008134
            "transcription factor binding" evidence=ISO;IDA;IPI] [GO:0008284
            "positive regulation of cell proliferation" evidence=ISO]
            [GO:0008285 "negative regulation of cell proliferation"
            evidence=ISO;IGI] [GO:0010628 "positive regulation of gene
            expression" evidence=ISO] [GO:0010629 "negative regulation of gene
            expression" evidence=ISO] [GO:0010942 "positive regulation of cell
            death" evidence=ISO] [GO:0014068 "positive regulation of
            phosphatidylinositol 3-kinase cascade" evidence=ISO] [GO:0030284
            "estrogen receptor activity" evidence=ISO] [GO:0030295 "protein
            kinase activator activity" evidence=ISO] [GO:0030331 "estrogen
            receptor binding" evidence=ISO] [GO:0030521 "androgen receptor
            signaling pathway" evidence=ISO] [GO:0030850 "prostate gland
            development" evidence=TAS] [GO:0033574 "response to testosterone
            stimulus" evidence=IMP] [GO:0035260 "internal genitalia
            morphogenesis" evidence=TAS] [GO:0042826 "histone deacetylase
            binding" evidence=ISO] [GO:0043280 "positive regulation of
            cysteine-type endopeptidase activity involved in apoptotic process"
            evidence=ISO] [GO:0043491 "protein kinase B signaling cascade"
            evidence=ISO;IMP] [GO:0043565 "sequence-specific DNA binding"
            evidence=ISO;IDA] [GO:0043569 "negative regulation of insulin-like
            growth factor receptor signaling pathway" evidence=IDA] [GO:0043621
            "protein self-association" evidence=ISO] [GO:0044212 "transcription
            regulatory region DNA binding" evidence=ISO] [GO:0045860 "positive
            regulation of protein kinase activity" evidence=ISO] [GO:0045892
            "negative regulation of transcription, DNA-dependent"
            evidence=ISO;IMP] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=ISO;IDA] [GO:0045930
            "negative regulation of mitotic cell cycle" evidence=ISO]
            [GO:0045931 "positive regulation of mitotic cell cycle"
            evidence=ISO] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=ISO] [GO:0048754
            "branching morphogenesis of an epithelial tube" evidence=IMP]
            [GO:0050680 "negative regulation of epithelial cell proliferation"
            evidence=IMP] [GO:0051781 "positive regulation of cell division"
            evidence=ISO] [GO:0060442 "branching involved in prostate gland
            morphogenesis" evidence=IMP] [GO:0060664 "epithelial cell
            proliferation involved in salivary gland morphogenesis"
            evidence=IMP] [GO:0060770 "negative regulation of epithelial cell
            proliferation involved in prostate gland development" evidence=IMP]
            [GO:0071383 "cellular response to steroid hormone stimulus"
            evidence=ISO] [GO:0071456 "cellular response to hypoxia"
            evidence=ISO] [GO:0071850 "mitotic cell cycle arrest" evidence=ISO]
            [GO:0071899 "negative regulation of estrogen receptor binding"
            evidence=ISO] [GO:0097162 "MADS box domain binding" evidence=IDA]
            [GO:2000836 "positive regulation of androgen secretion"
            evidence=ISO] [GO:2001022 "positive regulation of response to DNA
            damage stimulus" evidence=ISO] [GO:2001235 "positive regulation of
            apoptotic signaling pathway" evidence=ISO] [GO:2001244 "positive
            regulation of intrinsic apoptotic signaling pathway" evidence=ISO]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            MGI:MGI:97352 GO:GO:0005634 GO:GO:0045892 GO:GO:0007507
            GO:GO:0045931 GO:GO:0008284 GO:GO:0051781 GO:GO:0045944
            GO:GO:0071456 GO:GO:0014068 GO:GO:0030295 GO:GO:0043621
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0008584 GO:GO:0001756 GO:GO:0006919 GO:GO:0035690
            GO:GO:0010942 GO:GO:0060037 GO:GO:0033574 GO:GO:0001047
            GO:GO:0008656 GO:GO:0008134 GO:GO:0043491 GO:GO:0000976
            GO:GO:0004882 GO:GO:0071347 GO:GO:0071356 GO:GO:0030331
            GO:GO:0060770 GO:GO:0001656 GO:GO:2001244 GO:GO:0043569
            GO:GO:0048754 GO:GO:0045930 GO:GO:2001022 GO:GO:0060442
            GO:GO:0071850 GO:GO:0000988 GO:GO:0030284 GO:GO:0060664
            HOGENOM:HOG000231923 HOVERGEN:HBG006689 KO:K09348 GO:GO:0071899
            CTD:4824 eggNOG:NOG238786 OMA:TEPERHL OrthoDB:EOG46Q6TS
            GO:GO:0035907 GO:GO:2000836 EMBL:U73460 EMBL:U88542 IPI:IPI00125359
            RefSeq:NP_035051.1 UniGene:Mm.3520 ProteinModelPortal:P97436
            SMR:P97436 STRING:P97436 PhosphoSite:P97436 PRIDE:P97436
            Ensembl:ENSMUST00000022646 GeneID:18095 KEGG:mmu:18095
            InParanoid:P97436 NextBio:293247 Bgee:P97436 CleanEx:MM_NKX3-1
            Genevestigator:P97436 GermOnline:ENSMUSG00000022061 GO:GO:0097162
            GO:GO:0035260 Uniprot:P97436
        Length = 237

 Score = 126 (49.4 bits), Expect = 7.1e-06, P = 7.1e-06
 Identities = 30/71 (42%), Positives = 39/71 (54%)

Query:    59 EKKRR--LSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQ 116
             +K+ R   S  QV  LE+ F  +  L    +  LA+ L L   QV +WFQNRR + K KQ
Sbjct:   125 QKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTKRKQ 184

Query:   117 LERDYGVLKAN 127
             L  D GVL+ N
Sbjct:   185 LSEDLGVLEKN 195


>UNIPROTKB|F6USR4 [details] [associations]
            symbol:MEOX2 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0001525 "angiogenesis" evidence=IEA] [GO:0001757 "somite
            specification" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0007519 "skeletal muscle tissue development" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0060021 "palate development" evidence=IEA] [GO:0060173 "limb
            development" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 EMBL:AADN02000860 EMBL:AADN02000861
            EMBL:AADN02000862 EMBL:AADN02000863 EMBL:AADN02000864
            IPI:IPI00821029 ProteinModelPortal:F6USR4
            Ensembl:ENSGALT00000037944 ArrayExpress:F6USR4 Uniprot:F6USR4
        Length = 154

 Score = 112 (44.5 bits), Expect = 7.7e-06, P = 7.7e-06
 Identities = 22/55 (40%), Positives = 33/55 (60%)

Query:    59 EKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 113
             +++   + +Q++ LE  F   N L   R+ ++A  L L  RQV VWFQNRR +WK
Sbjct:    39 KERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWK 93


>MGI|MGI:94867 [details] [associations]
            symbol:Dbx1 "developing brain homeobox 1" species:10090 "Mus
            musculus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0006357 "regulation of
            transcription from RNA polymerase II promoter" evidence=ISO;IMP]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0021521 "ventral spinal cord interneuron specification"
            evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 MGI:MGI:94867
            GO:GO:0005634 GO:GO:0003700 GO:GO:0006357 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
            GeneTree:ENSGT00700000104097 HOGENOM:HOG000112172
            HOVERGEN:HBG005454 eggNOG:NOG257690 OrthoDB:EOG4T4CW6 CTD:120237
            OMA:YHASPDP GO:GO:0021521 EMBL:S75837 EMBL:BC082541 EMBL:AK134473
            IPI:IPI00132583 PIR:E41606 RefSeq:NP_001005232.1 UniGene:Mm.307176
            ProteinModelPortal:P52950 SMR:P52950 STRING:P52950
            PhosphoSite:P52950 PRIDE:P52950 Ensembl:ENSMUST00000032717
            GeneID:13172 KEGG:mmu:13172 UCSC:uc009hbn.1 InParanoid:P52950
            NextBio:283272 Bgee:P52950 CleanEx:MM_DBX1 Genevestigator:P52950
            GermOnline:ENSMUSG00000030507 Uniprot:P52950
        Length = 335

 Score = 129 (50.5 bits), Expect = 7.9e-06, P = 7.9e-06
 Identities = 27/54 (50%), Positives = 39/54 (72%)

Query:    68 QVKALEKNFEVENKL-EPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERD 120
             Q KALEK F+ +  + +P+RK KLA +LGL+  QV +WFQNRR +W+  + ER+
Sbjct:   192 QRKALEKTFQKQKYISKPDRK-KLASKLGLKDSQVKIWFQNRRMKWRNSK-ERE 243


>RGD|1308896 [details] [associations]
            symbol:Dbx1 "developing brain homeobox 1" species:10116 "Rattus
            norvegicus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006357
            "regulation of transcription from RNA polymerase II promoter"
            evidence=IEA;ISO] [GO:0021521 "ventral spinal cord interneuron
            specification" evidence=IEA;ISO] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 RGD:1308896 GO:GO:0005634 GO:GO:0003700 GO:GO:0006357
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0000976 GeneTree:ENSGT00700000104097 HOGENOM:HOG000112172
            HOVERGEN:HBG005454 HSSP:P23441 eggNOG:NOG257690 OrthoDB:EOG4T4CW6
            CTD:120237 OMA:YHASPDP GO:GO:0021521 EMBL:AB197138 IPI:IPI00203263
            RefSeq:NP_001009644.1 UniGene:Rn.104881 ProteinModelPortal:Q5NSW5
            STRING:Q5NSW5 PRIDE:Q5NSW5 Ensembl:ENSRNOT00000019739 GeneID:292934
            KEGG:rno:292934 UCSC:RGD:1308896 InParanoid:Q5NSW5 NextBio:635079
            Genevestigator:Q5NSW5 Uniprot:Q5NSW5
        Length = 335

 Score = 129 (50.5 bits), Expect = 7.9e-06, P = 7.9e-06
 Identities = 27/54 (50%), Positives = 39/54 (72%)

Query:    68 QVKALEKNFEVENKL-EPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERD 120
             Q KALEK F+ +  + +P+RK KLA +LGL+  QV +WFQNRR +W+  + ER+
Sbjct:   192 QRKALEKTFQKQKYISKPDRK-KLASKLGLKDSQVKIWFQNRRMKWRNSK-ERE 243


>UNIPROTKB|F1NHM4 [details] [associations]
            symbol:CDX4 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00530000063388 GO:GO:0000976 EMBL:AADN02013531
            EMBL:AADN02013532 IPI:IPI00820756 Ensembl:ENSGALT00000039471
            Uniprot:F1NHM4
        Length = 60

 Score = 109 (43.4 bits), Expect = 8.2e-06, P = 8.2e-06
 Identities = 25/54 (46%), Positives = 31/54 (57%)

Query:    59 EKKRRLSVDQVKA-LEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRAR 111
             EK R +  D  +  LEK F     +   RK +LA  LGL  RQV +WFQNRRA+
Sbjct:     2 EKYRVVYTDHQRLELEKEFHCNRYITIRRKSELAANLGLSERQVKIWFQNRRAK 55


>UNIPROTKB|F1P4U7 [details] [associations]
            symbol:HOXD11 "Homeobox protein Hox-D11" species:9031
            "Gallus gallus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
            [GO:0001658 "branching involved in ureteric bud morphogenesis"
            evidence=IEA] [GO:0001759 "organ induction" evidence=IEA]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
            evidence=IEA] [GO:0009954 "proximal/distal pattern formation"
            evidence=IEA] [GO:0010720 "positive regulation of cell development"
            evidence=IEA] [GO:0032332 "positive regulation of chondrocyte
            differentiation" evidence=IEA] [GO:0042733 "embryonic digit
            morphogenesis" evidence=IEA] [GO:0048589 "developmental growth"
            evidence=IEA] [GO:0060272 "embryonic skeletal joint morphogenesis"
            evidence=IEA] [GO:0060351 "cartilage development involved in
            endochondral bone morphogenesis" evidence=IEA] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0032332 GO:GO:0048589 GO:GO:0001759
            GO:GO:0010720 GeneTree:ENSGT00700000104263 IPI:IPI00583692
            EMBL:AADN02020032 Ensembl:ENSGALT00000015085 Uniprot:F1P4U7
        Length = 109

 Score = 109 (43.4 bits), Expect = 8.2e-06, P = 8.2e-06
 Identities = 26/64 (40%), Positives = 39/64 (60%)

Query:    58 SEKKR-RLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQ 116
             S KKR   +  Q++ LE+ F     +  E++++L++ L L  RQV +WFQNRR   K K+
Sbjct:    37 SRKKRCPYTKYQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRM--KEKK 94

Query:   117 LERD 120
             L RD
Sbjct:    95 LNRD 98


>UNIPROTKB|H9KZ47 [details] [associations]
            symbol:HOXB7 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104090 EMBL:AADN02027109 EMBL:AADN02027110
            Ensembl:ENSGALT00000004740 Uniprot:H9KZ47
        Length = 147

 Score = 109 (43.4 bits), Expect = 8.2e-06, P = 8.2e-06
 Identities = 20/46 (43%), Positives = 27/46 (58%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 113
             Q   LEK F     L   R++++A  L L  RQ+ +WFQNRR +WK
Sbjct:    78 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWK 123


>UNIPROTKB|P13544 [details] [associations]
            symbol:HOXD1 "Homeobox protein Hox-D1" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 eggNOG:NOG314488 EMBL:M23611 IPI:IPI01017276
            PIR:JU0068 ProteinModelPortal:P13544 SMR:P13544 InParanoid:P13544
            Uniprot:P13544
        Length = 67

 Score = 109 (43.4 bits), Expect = 8.2e-06, P = 8.2e-06
 Identities = 23/55 (41%), Positives = 33/55 (60%)

Query:    65 SVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLER 119
             S  Q+  LEK F     L   R++++A+ L L+  QV VWFQNRR + K ++ ER
Sbjct:     9 STRQLTELEKEFHFSRYLSRARRLEVARSLRLRDAQVKVWFQNRRMKQKKRERER 63


>RGD|1587253 [details] [associations]
            symbol:Hoxa7 "homeobox A7" species:10116 "Rattus norvegicus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=ISO] [GO:0001525 "angiogenesis"
            evidence=ISO] [GO:0001953 "negative regulation of cell-matrix
            adhesion" evidence=ISO] [GO:0002686 "negative regulation of
            leukocyte migration" evidence=ISO] [GO:0003677 "DNA binding"
            evidence=ISO] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA;ISO] [GO:0005634
            "nucleus" evidence=IEA;ISO] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0008134 "transcription factor
            binding" evidence=ISO] [GO:0009952 "anterior/posterior pattern
            specification" evidence=ISO] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA;ISO] [GO:0045617 "negative regulation of
            keratinocyte differentiation" evidence=ISO] [GO:0045656 "negative
            regulation of monocyte differentiation" evidence=ISO] [GO:0045892
            "negative regulation of transcription, DNA-dependent" evidence=ISO]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=ISO] [GO:0048704 "embryonic
            skeletal system morphogenesis" evidence=ISO] [GO:0048863 "stem cell
            differentiation" evidence=ISO] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1587253
            GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
            GO:GO:0048863 GO:GO:0002686 GO:GO:0003700 GO:GO:0006351
            GO:GO:0001525 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0000122 GO:GO:0001953
            GO:GO:0048704 eggNOG:NOG238660 HOVERGEN:HBG006088 OrthoDB:EOG4W9J4Z
            GO:GO:0045617 GO:GO:0045656 EMBL:M16807 IPI:IPI01016307 PIR:A27471
            UniGene:Rn.203714 ProteinModelPortal:P09634 SMR:P09634
            UCSC:RGD:1587253 InParanoid:P09634 ArrayExpress:P09634
            Genevestigator:P09634 GermOnline:ENSRNOG00000006544 Uniprot:P09634
        Length = 105

 Score = 109 (43.4 bits), Expect = 8.2e-06, P = 8.2e-06
 Identities = 23/64 (35%), Positives = 31/64 (48%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKAN 127
             Q   LEK F     L   R V++A  L L  RQ+ +WFQNRR +WK +  +         
Sbjct:    16 QTLELEKEFHFNRYLTRRRAVEIAHALCLTERQIKIWFQNRRMKWKKEHKDESQAPTAVP 75

Query:   128 YDAL 131
              DA+
Sbjct:    76 EDAV 79


>UNIPROTKB|P09634 [details] [associations]
            symbol:Hoxa7 "Homeobox protein Hox-A7" species:10116
            "Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1587253
            GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
            GO:GO:0048863 GO:GO:0002686 GO:GO:0003700 GO:GO:0006351
            GO:GO:0001525 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0000122 GO:GO:0001953
            GO:GO:0048704 eggNOG:NOG238660 HOVERGEN:HBG006088 OrthoDB:EOG4W9J4Z
            GO:GO:0045617 GO:GO:0045656 EMBL:M16807 IPI:IPI01016307 PIR:A27471
            UniGene:Rn.203714 ProteinModelPortal:P09634 SMR:P09634
            UCSC:RGD:1587253 InParanoid:P09634 ArrayExpress:P09634
            Genevestigator:P09634 GermOnline:ENSRNOG00000006544 Uniprot:P09634
        Length = 105

 Score = 109 (43.4 bits), Expect = 8.2e-06, P = 8.2e-06
 Identities = 23/64 (35%), Positives = 31/64 (48%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKAN 127
             Q   LEK F     L   R V++A  L L  RQ+ +WFQNRR +WK +  +         
Sbjct:    16 QTLELEKEFHFNRYLTRRRAVEIAHALCLTERQIKIWFQNRRMKWKKEHKDESQAPTAVP 75

Query:   128 YDAL 131
              DA+
Sbjct:    76 EDAV 79


>UNIPROTKB|F1PND7 [details] [associations]
            symbol:DBX2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
            GeneTree:ENSGT00700000104097 EMBL:AAEX03015118
            Ensembl:ENSCAFT00000014915 OMA:HEMRITL Uniprot:F1PND7
        Length = 206

 Score = 123 (48.4 bits), Expect = 9.0e-06, P = 9.0e-06
 Identities = 26/55 (47%), Positives = 36/55 (65%)

Query:    65 SVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK-TKQLE 118
             S DQ KALEK F+ +  +    + KLA  LGL+  QV +WFQNRR +W+ +K+ E
Sbjct:    62 SEDQRKALEKMFQKQKYISKTDRKKLAISLGLKESQVKIWFQNRRMKWRNSKEKE 116


>UNIPROTKB|Q0P4H6 [details] [associations]
            symbol:lbx1 "Transcription factor LBX1" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=ISS] [GO:0005667 "transcription factor complex"
            evidence=ISS] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0007517 "muscle organ development"
            evidence=ISS] [GO:0051450 "myoblast proliferation" evidence=ISS]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0030154 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
            GO:GO:0000122 GO:GO:0007517 GO:GO:0000976 GO:GO:0051450 CTD:10660
            HOVERGEN:HBG006244 KO:K09353 EMBL:BC122077 RefSeq:NP_001072559.1
            UniGene:Str.53738 ProteinModelPortal:Q0P4H6 GeneID:780014
            KEGG:xtr:780014 Xenbase:XB-GENE-6455157 Uniprot:Q0P4H6
        Length = 265

 Score = 126 (49.4 bits), Expect = 1.0e-05, P = 1.0e-05
 Identities = 41/109 (37%), Positives = 58/109 (53%)

Query:    60 KKRRLSVD-----QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKT 114
             KKRR S       Q+  LEK F  +  L P  + ++AQ+LGL   QV  WFQNRRA+   
Sbjct:   123 KKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAK--- 179

Query:   115 KQLERDYGVLKANYDALKLNYDSLQHDNEALLKEIRELKSKLNEENTES 163
               L+RD   +KA+ +++K    S     EA+L  I EL+ + N    +S
Sbjct:   180 --LKRDLEEMKADVESVKKMSPSTV---EAVLT-ISELEEETNSVRDDS 222


>UNIPROTKB|F1NNC8 [details] [associations]
            symbol:TLX1 "T-cell leukemia homeobox protein 1"
            species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0007417 "central nervous system development"
            evidence=IEA] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IEA] [GO:0030182 "neuron differentiation"
            evidence=IEA] [GO:0045165 "cell fate commitment" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0046982 "protein
            heterodimerization activity" evidence=IEA] [GO:0048536 "spleen
            development" evidence=IEA] [GO:0048645 "organ formation"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0008284 GO:GO:0043565
            GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0045165
            GeneTree:ENSGT00700000104454 IPI:IPI00573767 EMBL:AADN02030793
            Ensembl:ENSGALT00000012707 OMA:XLISELE ArrayExpress:F1NNC8
            Uniprot:F1NNC8
        Length = 141

 Score = 108 (43.1 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 28/84 (33%), Positives = 43/84 (51%)

Query:    59 EKKRRLSVD--QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQ 116
             +KK R S    Q+  LEK F  +  L    +  LA+ L +   QV  WFQNRR +W+ + 
Sbjct:    12 KKKPRTSFTRLQICELEKRFHRQKYLASAERAALAKALKMTDAQVKTWFQNRRTKWRRQT 71

Query:   117 LE-RDYGVLKANYDALKLNYDSLQ 139
              E R+    +AN   ++L  ++ Q
Sbjct:    72 AEEREAERQQANRILMQLQQEAFQ 95


>TAIR|locus:2129396 [details] [associations]
            symbol:HDG4 "AT4G17710" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0006944 "cellular membrane fusion" evidence=RCA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
            EMBL:AL161547 Gene3D:1.10.10.60 SUPFAM:SSF46689 Pfam:PF01852
            SMART:SM00234 PROSITE:PS50848 HOGENOM:HOG000243256 KO:K09338
            HSSP:Q6B2C0 EMBL:Z97344 eggNOG:NOG264325 EMBL:AY133700
            IPI:IPI00546205 PIR:B71447 RefSeq:NP_193506.2 UniGene:At.32974
            ProteinModelPortal:Q8L7H4 SMR:Q8L7H4 IntAct:Q8L7H4 PaxDb:Q8L7H4
            PRIDE:Q8L7H4 EnsemblPlants:AT4G17710.1 GeneID:827492
            KEGG:ath:AT4G17710 TAIR:At4g17710 InParanoid:Q8L7H4
            PhylomeDB:Q8L7H4 Genevestigator:Q8L7H4 Uniprot:Q8L7H4
        Length = 709

 Score = 132 (51.5 bits), Expect = 1.2e-05, P = 1.2e-05
 Identities = 38/136 (27%), Positives = 70/136 (51%)

Query:    58 SEKKR--RLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTK 115
             ++KKR  R +  Q++ +E  F+     + + +++L+++LGL P QV  WFQN+R + K +
Sbjct:    87 AKKKRYHRHTASQIQQMEALFKENAHPDTKTRLRLSKKLGLSPIQVKFWFQNKRTQIKAQ 146

Query:   116 QLERDYGVLKANYDALKLNYDSLQHDNEALL-----KEIRELKSKLNEE--NTESNISVK 168
             Q   D   LKA  + LK    ++Q + + L        +R   ++L +E     S +S++
Sbjct:   147 QSRSDNAKLKAENETLKTESQNIQSNFQCLFCSTCGHNLRLENARLRQELDRLRSIVSMR 206

Query:   169 Q---EETIVHETDHQN 181
                  + I  ET+  N
Sbjct:   207 NPSPSQEITPETNKNN 222


>UNIPROTKB|F1MJX0 [details] [associations]
            symbol:CDX2 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0060711 "labyrinthine layer development" evidence=IEA]
            [GO:0045597 "positive regulation of cell differentiation"
            evidence=IEA] [GO:0045197 "establishment or maintenance of
            epithelial cell apical/basal polarity" evidence=IEA] [GO:0035019
            "somatic stem cell maintenance" evidence=IEA] [GO:0017053
            "transcriptional repressor complex" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0008333 "endosome to lysosome transport" evidence=IEA]
            [GO:0003714 "transcription corepressor activity" evidence=IEA]
            [GO:0001829 "trophectodermal cell differentiation" evidence=IEA]
            [GO:0001568 "blood vessel development" evidence=IEA] [GO:0000794
            "condensed nuclear chromosome" evidence=IEA] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0000976
            "transcription regulatory region sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0017053
            GO:GO:0003714 GO:GO:0009952 GO:GO:0045597 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00530000063388 GO:GO:0000122 GO:GO:0001829
            GO:GO:0000794 GO:GO:0008333 GO:GO:0035019 GO:GO:0001568
            GO:GO:0000976 GO:GO:0060711 GO:GO:0045197 EMBL:DAAA02033157
            IPI:IPI00838985 Ensembl:ENSBTAT00000047376 Uniprot:F1MJX0
        Length = 142

 Score = 107 (42.7 bits), Expect = 1.4e-05, P = 1.4e-05
 Identities = 24/54 (44%), Positives = 31/54 (57%)

Query:    59 EKKRRLSVDQVKA-LEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRAR 111
             +K R +  D  +  LEK F     +   RK +LA  LGL  RQV +WFQNRRA+
Sbjct:    23 DKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAK 76


>UNIPROTKB|Q9C056 [details] [associations]
            symbol:NKX6-2 "Homeobox protein Nkx-6.2" species:9606 "Homo
            sapiens" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0010454 "negative regulation of cell fate
            commitment" evidence=IEA] [GO:0010455 "positive regulation of cell
            fate commitment" evidence=IEA] [GO:0021912 "regulation of
            transcription from RNA polymerase II promoter involved in spinal
            cord motor neuron fate specification" evidence=IEA] [GO:0021913
            "regulation of transcription from RNA polymerase II promoter
            involved in ventral spinal cord interneuron specification"
            evidence=IEA] [GO:0022010 "central nervous system myelination"
            evidence=IEA] [GO:0031018 "endocrine pancreas development"
            evidence=IEA] [GO:0045686 "negative regulation of glial cell
            differentiation" evidence=IEA] [GO:0045687 "positive regulation of
            glial cell differentiation" evidence=IEA] [GO:0050885
            "neuromuscular process controlling balance" evidence=IEA]
            [GO:0005634 "nucleus" evidence=NAS] [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=NAS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=NAS] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0050885 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0022010
            GO:GO:0031018 GO:GO:0000976 EMBL:CH471211 GO:GO:0021913
            GO:GO:0045687 HSSP:P13297 EMBL:AL392043 GO:GO:0045686 GO:GO:0010455
            GO:GO:0010454 eggNOG:NOG265304 HOGENOM:HOG000060127
            HOVERGEN:HBG070987 OrthoDB:EOG4JT064 GO:GO:0021912 EMBL:AF184215
            EMBL:BC101635 EMBL:BC104823 IPI:IPI00028161 RefSeq:NP_796374.1
            UniGene:Hs.134013 ProteinModelPortal:Q9C056 SMR:Q9C056
            STRING:Q9C056 PhosphoSite:Q9C056 DMDM:158564033 PRIDE:Q9C056
            Ensembl:ENST00000368592 GeneID:84504 KEGG:hsa:84504 UCSC:uc001llr.2
            CTD:84504 GeneCards:GC10M134598 HGNC:HGNC:19321 MIM:605955
            neXtProt:NX_Q9C056 PharmGKB:PA134896334 InParanoid:Q9C056 KO:K09350
            OMA:GPAGFKA PhylomeDB:Q9C056 GenomeRNAi:84504 NextBio:74300
            Bgee:Q9C056 CleanEx:HS_NKX6-2 Genevestigator:Q9C056 Uniprot:Q9C056
        Length = 277

 Score = 125 (49.1 bits), Expect = 1.5e-05, P = 1.5e-05
 Identities = 31/82 (37%), Positives = 43/82 (52%)

Query:    65 SVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQ-LERDYGV 123
             S  Q+ ALEK FE    L    + +LA  LG+   QV VWFQNRR +W+ +  +E     
Sbjct:   156 SGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKRHAVEMASAK 215

Query:   124 LKANYDA--LKLNYDSLQHDNE 143
              K + DA  LK+     + D+E
Sbjct:   216 KKQDSDAEKLKVGGSDAEDDDE 237


>UNIPROTKB|F1NPY3 [details] [associations]
            symbol:F1NPY3 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0001541 "ovarian follicle development"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0045944 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976
            GeneTree:ENSGT00650000093445 EMBL:AADN02065142 EMBL:AADN02065141
            IPI:IPI00584945 Ensembl:ENSGALT00000030041 OMA:GMIASCE
            Uniprot:F1NPY3
        Length = 204

 Score = 121 (47.7 bits), Expect = 1.5e-05, P = 1.5e-05
 Identities = 24/62 (38%), Positives = 43/62 (69%)

Query:    57 VSEKKRRL-SVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARW-KT 114
             V +K R   S +Q++ LEK F+ +   + E++ ++A  +G+ P+++ VWFQNRRA+W KT
Sbjct:     8 VKKKTRTFYSAEQLEELEKVFQEDRYPDNEKRREIAAVIGVTPQRIMVWFQNRRAKWRKT 67

Query:   115 KQ 116
             ++
Sbjct:    68 EK 69


>ZFIN|ZDB-GENE-070626-1 [details] [associations]
            symbol:nkx6.2 "NK6 transcription factor related,
            locus 2" species:7955 "Danio rerio" [GO:0043565 "sequence-specific
            DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0000976 "transcription
            regulatory region sequence-specific DNA binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003310 "pancreatic A
            cell differentiation" evidence=IGI;IMP] [GO:0003309 "type B
            pancreatic cell differentiation" evidence=IGI;IMP] [GO:0031018
            "endocrine pancreas development" evidence=IGI;IMP] [GO:0021522
            "spinal cord motor neuron differentiation" evidence=IGI;IMP]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-070626-1 GO:GO:0005634
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0021522 GO:GO:0000976 GO:GO:0003310
            GO:GO:0003309 eggNOG:NOG265304 HOGENOM:HOG000060127
            HOVERGEN:HBG070987 OrthoDB:EOG4JT064 EMBL:DQ416765 IPI:IPI00511922
            UniGene:Dr.15365 STRING:A3QRJ9 InParanoid:A3QRJ9 Uniprot:A3QRJ9
        Length = 280

 Score = 125 (49.1 bits), Expect = 1.5e-05, P = 1.5e-05
 Identities = 36/111 (32%), Positives = 56/111 (50%)

Query:    65 SVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVL 124
             S  Q+ ALEK FE    L    + +LA  LG+   QV VWFQNRR +W+ K+   +    
Sbjct:   159 SGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWR-KRHAAEMATA 217

Query:   125 KANYDA----LKLNYDSLQHD--NEAL--LKEIRELKSKLNEENTESNISV 167
             K  +D+    +K + D+ + D  N+ L    +  ++   L    T SN+S+
Sbjct:   218 KKKHDSETEKMKESSDNDEDDEYNKPLDPNSDDEKITRLLKXHKTTSNLSL 268


>ZFIN|ZDB-GENE-000128-8 [details] [associations]
            symbol:dbx1a "developing brain homeobox 1a"
            species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0021515 "cell
            differentiation in spinal cord" evidence=IGI] [GO:0007275
            "multicellular organismal development" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-000128-8 GO:GO:0005634
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0000976 HSSP:P06602
            GeneTree:ENSGT00700000104097 EMBL:AF030284 EMBL:BC095020
            IPI:IPI00496328 RefSeq:NP_571233.1 UniGene:Dr.8070
            ProteinModelPortal:Q9PTU1 Ensembl:ENSDART00000022441 GeneID:30394
            KEGG:dre:30394 CTD:30394 HOGENOM:HOG000112172 HOVERGEN:HBG005454
            InParanoid:Q9PTU1 NextBio:20806805 Bgee:Q9PTU1 GO:GO:0021515
            Uniprot:Q9PTU1
        Length = 314

 Score = 126 (49.4 bits), Expect = 1.5e-05, P = 1.5e-05
 Identities = 27/54 (50%), Positives = 39/54 (72%)

Query:    68 QVKALEKNFEVENKL-EPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERD 120
             Q KALEK F+ +  + +P+RK KLA +LGL+  QV +WFQNRR +W+  + ER+
Sbjct:   186 QRKALEKMFQKQKYISKPDRK-KLAAKLGLKDSQVKIWFQNRRMKWRNSK-ERE 237


>ZFIN|ZDB-GENE-000128-11 [details] [associations]
            symbol:dbx1b "developing brain homeobox 1b"
            species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0021515 "cell
            differentiation in spinal cord" evidence=IGI] [GO:0007275
            "multicellular organismal development" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-000128-11 GO:GO:0005634
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0000976 HOGENOM:HOG000112172
            HOVERGEN:HBG005454 GO:GO:0021515 EMBL:AF030285 IPI:IPI00508605
            RefSeq:NP_571253.1 UniGene:Dr.81310 HSSP:P23441
            ProteinModelPortal:Q9PTU0 PRIDE:Q9PTU0 GeneID:30416 KEGG:dre:30416
            CTD:30416 eggNOG:NOG257690 InParanoid:Q9PTU0 OrthoDB:EOG4T4CW6
            NextBio:20806822 ArrayExpress:Q9PTU0 Uniprot:Q9PTU0
        Length = 322

 Score = 126 (49.4 bits), Expect = 1.6e-05, P = 1.6e-05
 Identities = 27/54 (50%), Positives = 39/54 (72%)

Query:    68 QVKALEKNFEVENKL-EPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERD 120
             Q KALEK F+ +  + +P+RK KLA +LGL+  QV +WFQNRR +W+  + ER+
Sbjct:   190 QRKALEKMFQKQKYISKPDRK-KLATKLGLKDSQVKIWFQNRRMKWRNSK-ERE 241


>FB|FBgn0040318 [details] [associations]
            symbol:HGTX "HGTX" species:7227 "Drosophila melanogaster"
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISS] [GO:0007399 "nervous system development"
            evidence=IMP] [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0007417 "central
            nervous system development" evidence=IGI] [GO:0010629 "negative
            regulation of gene expression" evidence=IGI;IMP] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IDA] [GO:0070491
            "repressing transcription factor binding" evidence=IPI] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IDA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IDA]
            [GO:0030182 "neuron differentiation" evidence=IMP]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 EMBL:AE014296
            GO:GO:0030182 GO:GO:0045944 GO:GO:0007417 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0003705
            GO:GO:0000122 GO:GO:0000976 eggNOG:NOG265304 RefSeq:NP_001137954.1
            UniGene:Dm.3490 ProteinModelPortal:B7Z056 SMR:B7Z056 STRING:B7Z056
            GeneID:53446 KEGG:dme:Dmel_CG13475 CTD:53446 FlyBase:FBgn0040318
            OMA:VHAHAMA OrthoDB:EOG447D8J PhylomeDB:B7Z056 GenomeRNAi:53446
            NextBio:841198 Bgee:B7Z056 Uniprot:B7Z056
        Length = 605

 Score = 130 (50.8 bits), Expect = 1.6e-05, P = 1.6e-05
 Identities = 38/116 (32%), Positives = 56/116 (48%)

Query:    65 SVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVL 124
             S  Q+ ALEK FE    L    + KLA  LG+   QV VWFQNRR +W+ K+   +    
Sbjct:   492 SGQQIFALEKTFEQTKYLAGPERAKLAYALGMSESQVKVWFQNRRTKWR-KRHAAEMATA 550

Query:   125 KANYDALKLNYD-----SLQHDNEALLKEIRELKSKLNEENTESNISVKQEETIVH 175
             K   D +  + D     ++  DNE+L       ++K    N+ S  S +Q++   H
Sbjct:   551 KRKQDDMGGDNDGDCSETMDSDNESLDMGESPAQNKRCRSNS-SGSSQQQQDNYRH 605


>RGD|1305369 [details] [associations]
            symbol:Nkx3-1 "NK3 homeobox 1" species:10116 "Rattus norvegicus"
            [GO:0000976 "transcription regulatory region sequence-specific DNA
            binding" evidence=ISO;ISS] [GO:0000983 "RNA polymerase II core
            promoter sequence-specific DNA binding transcription factor
            activity" evidence=IEA;ISO] [GO:0000988 "protein binding
            transcription factor activity" evidence=ISO;ISS] [GO:0001047 "core
            promoter binding" evidence=ISO;ISS] [GO:0001656 "metanephros
            development" evidence=IEA] [GO:0001756 "somitogenesis"
            evidence=IEA] [GO:0001934 "positive regulation of protein
            phosphorylation" evidence=ISO;ISS] [GO:0003677 "DNA binding"
            evidence=ISO] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISO;ISS] [GO:0004882
            "androgen receptor activity" evidence=ISO;ISS] [GO:0005622
            "intracellular" evidence=ISO] [GO:0005634 "nucleus"
            evidence=ISO;ISS] [GO:0006919 "activation of cysteine-type
            endopeptidase activity involved in apoptotic process"
            evidence=ISO;ISS] [GO:0007431 "salivary gland development"
            evidence=ISO;ISS] [GO:0007507 "heart development" evidence=IEA]
            [GO:0008134 "transcription factor binding" evidence=IEA;ISO]
            [GO:0008284 "positive regulation of cell proliferation"
            evidence=ISO;ISS] [GO:0008285 "negative regulation of cell
            proliferation" evidence=ISO;ISS] [GO:0008584 "male gonad
            development" evidence=IEA] [GO:0008656 "cysteine-type endopeptidase
            activator activity involved in apoptotic process" evidence=IEA;ISO]
            [GO:0010628 "positive regulation of gene expression"
            evidence=ISO;ISS] [GO:0010629 "negative regulation of gene
            expression" evidence=ISO] [GO:0010942 "positive regulation of cell
            death" evidence=ISO;ISS] [GO:0014068 "positive regulation of
            phosphatidylinositol 3-kinase cascade" evidence=ISO;ISS]
            [GO:0030284 "estrogen receptor activity" evidence=ISO;ISS]
            [GO:0030295 "protein kinase activator activity" evidence=ISO;ISS]
            [GO:0030331 "estrogen receptor binding" evidence=ISO;ISS]
            [GO:0030521 "androgen receptor signaling pathway" evidence=ISO;ISS]
            [GO:0033574 "response to testosterone stimulus" evidence=ISO;ISS]
            [GO:0035690 "cellular response to drug" evidence=IEA;ISO]
            [GO:0035907 "dorsal aorta development" evidence=IEA] [GO:0042826
            "histone deacetylase binding" evidence=IEA;ISO] [GO:0043280
            "positive regulation of cysteine-type endopeptidase activity
            involved in apoptotic process" evidence=ISO;ISS] [GO:0043491
            "protein kinase B signaling cascade" evidence=ISO;ISS] [GO:0043565
            "sequence-specific DNA binding" evidence=ISO] [GO:0043569 "negative
            regulation of insulin-like growth factor receptor signaling
            pathway" evidence=ISO;ISS] [GO:0043621 "protein self-association"
            evidence=ISO;ISS] [GO:0044212 "transcription regulatory region DNA
            binding" evidence=ISO] [GO:0045860 "positive regulation of protein
            kinase activity" evidence=ISO] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=ISO;ISS] [GO:0045893
            "positive regulation of transcription, DNA-dependent"
            evidence=ISO;ISS] [GO:0045930 "negative regulation of mitotic cell
            cycle" evidence=IEA;ISO] [GO:0045931 "positive regulation of
            mitotic cell cycle" evidence=ISO;ISS] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=ISO;ISS] [GO:0048754 "branching morphogenesis of an
            epithelial tube" evidence=ISO;ISS] [GO:0050680 "negative regulation
            of epithelial cell proliferation" evidence=ISO;ISS] [GO:0051781
            "positive regulation of cell division" evidence=ISO;ISS]
            [GO:0060037 "pharyngeal system development" evidence=IEA]
            [GO:0060442 "branching involved in prostate gland morphogenesis"
            evidence=ISO;ISS] [GO:0060664 "epithelial cell proliferation
            involved in salivary gland morphogenesis" evidence=ISO;ISS]
            [GO:0060770 "negative regulation of epithelial cell proliferation
            involved in prostate gland development" evidence=ISO;ISS]
            [GO:0071347 "cellular response to interleukin-1" evidence=IEA;ISO]
            [GO:0071356 "cellular response to tumor necrosis factor"
            evidence=IEA;ISO] [GO:0071383 "cellular response to steroid hormone
            stimulus" evidence=ISO;ISS] [GO:0071456 "cellular response to
            hypoxia" evidence=IEA;ISO] [GO:0071850 "mitotic cell cycle arrest"
            evidence=IEA;ISO] [GO:0071899 "negative regulation of estrogen
            receptor binding" evidence=ISO;ISS] [GO:0097162 "MADS box domain
            binding" evidence=IEA;ISO] [GO:2000836 "positive regulation of
            androgen secretion" evidence=ISO;ISS] [GO:2001022 "positive
            regulation of response to DNA damage stimulus" evidence=ISO;ISS]
            [GO:2001235 "positive regulation of apoptotic signaling pathway"
            evidence=ISO] [GO:2001244 "positive regulation of intrinsic
            apoptotic signaling pathway" evidence=ISO;ISS] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 RGD:1305369 GO:GO:0005634
            GO:GO:0045892 GO:GO:0007507 GO:GO:0045931 GO:GO:0008284
            GO:GO:0051781 GO:GO:0045944 GO:GO:0071456 GO:GO:0014068
            GO:GO:0030295 GO:GO:0043621 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0008584 GO:GO:0001756
            GO:GO:0006919 GO:GO:0035690 GO:GO:0010942 GO:GO:0060037
            GO:GO:0033574 GO:GO:0001047 GO:GO:0008656 GO:GO:0043491
            GO:GO:0000976 GO:GO:0004882 GO:GO:0071347 GO:GO:0071356
            GO:GO:0030331 GO:GO:0000983 GO:GO:0060770 GO:GO:0001656
            GO:GO:2001244 GO:GO:0043569 GO:GO:0048754
            GeneTree:ENSGT00700000104206 GO:GO:0045930 GO:GO:2001022
            GO:GO:0060442 GO:GO:0071850 GO:GO:0000988 GO:GO:0030284
            GO:GO:0060664 EMBL:CH473951 HOGENOM:HOG000231923 HOVERGEN:HBG006689
            KO:K09348 GO:GO:0071899 CTD:4824 eggNOG:NOG238786 OMA:TEPERHL
            OrthoDB:EOG46Q6TS GO:GO:0035907 GO:GO:2000836 EMBL:BC100628
            IPI:IPI00373298 RefSeq:NP_001029316.1 UniGene:Rn.43468 SMR:Q497B7
            STRING:Q497B7 Ensembl:ENSRNOT00000020753 GeneID:305999
            KEGG:rno:305999 UCSC:RGD:1305369 InParanoid:Q497B7 NextBio:655374
            Genevestigator:Q497B7 Uniprot:Q497B7
        Length = 238

 Score = 123 (48.4 bits), Expect = 1.6e-05, P = 1.6e-05
 Identities = 29/71 (40%), Positives = 39/71 (54%)

Query:    59 EKKRR--LSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQ 116
             +K+ R   S  QV  LE+ F  +  L    +  LA+ L L   QV +WFQNRR + K +Q
Sbjct:   126 QKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTKRRQ 185

Query:   117 LERDYGVLKAN 127
             L  D GVL+ N
Sbjct:   186 LSEDLGVLEKN 196


>UNIPROTKB|F6R243 [details] [associations]
            symbol:CDX1 "Homeobox protein CDX-1" species:9031 "Gallus
            gallus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0060349 "bone
            morphogenesis" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0000976 EMBL:AADN02028624 IPI:IPI00819151
            ProteinModelPortal:F6R243 Ensembl:ENSGALT00000040457 Uniprot:F6R243
        Length = 117

 Score = 106 (42.4 bits), Expect = 1.8e-05, P = 1.8e-05
 Identities = 24/54 (44%), Positives = 31/54 (57%)

Query:    59 EKKRRLSVDQVKA-LEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRAR 111
             +K R +  D  +  LEK F     +   RK +LA  LGL  RQV +WFQNRRA+
Sbjct:     7 DKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAAALGLTERQVKIWFQNRRAK 60


>UNIPROTKB|G3V397 [details] [associations]
            symbol:BARX2 "Homeobox protein BarH-like 2" species:9606
            "Homo sapiens" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0001502 "cartilage condensation" evidence=IEA]
            [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=IEA] [GO:0014902 "myotube differentiation" evidence=IEA]
            [GO:0042637 "catagen" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0045944
            GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122
            GO:GO:0001502 GO:GO:0000976 EMBL:AP003775 HGNC:HGNC:956
            GO:GO:0042637 GO:GO:0014902 ProteinModelPortal:G3V397 SMR:G3V397
            Ensembl:ENST00000526127 ArrayExpress:G3V397 Bgee:G3V397
            Uniprot:G3V397
        Length = 134

 Score = 106 (42.4 bits), Expect = 1.8e-05, P = 1.8e-05
 Identities = 21/47 (44%), Positives = 28/47 (59%)

Query:    72 LEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLE 118
             LEK F+ +  L    ++ LAQ LGL   QV  W+QNRR +WK   L+
Sbjct:     3 LEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKWKKMVLK 49


>UNIPROTKB|I3LRX4 [details] [associations]
            symbol:I3LRX4 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00660000095141 Ensembl:ENSSSCT00000029259 OMA:PVHVNRI
            Uniprot:I3LRX4
        Length = 116

 Score = 106 (42.4 bits), Expect = 1.8e-05, P = 1.8e-05
 Identities = 23/58 (39%), Positives = 34/58 (58%)

Query:    59 EKKRR---LSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 113
             E++RR    + +Q+  LEK F  +  L    + ++A  L L   QV +WFQNRRA+WK
Sbjct:     1 ERRRRGQHXTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWK 58


>WB|WBGene00000442 [details] [associations]
            symbol:ceh-19 species:6239 "Caenorhabditis elegans"
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104206 EMBL:Z11794 EMBL:Z11795 EMBL:FO080909
            PIR:S26301 PIR:T16113 RefSeq:NP_001023141.1 RefSeq:NP_001023142.1
            ProteinModelPortal:P26797 SMR:P26797 EnsemblMetazoa:F20D12.6b
            GeneID:177590 KEGG:cel:CELE_F20D12.6 UCSC:F20D12.6a CTD:177590
            WormBase:F20D12.6a WormBase:F20D12.6b eggNOG:NOG279638
            InParanoid:P26797 OMA:SARKHDY NextBio:897488 Uniprot:P26797
        Length = 199

 Score = 120 (47.3 bits), Expect = 1.8e-05, P = 1.8e-05
 Identities = 26/63 (41%), Positives = 37/63 (58%)

Query:    57 VSEKKRR--LSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKT 114
             V E+K R   S  Q+  LE  F+ +  L   ++++L+Q L L   Q+  WFQNRR +WK 
Sbjct:    92 VCERKPRQAYSARQLDRLETEFQTDKYLSVNKRIQLSQTLNLTETQIKTWFQNRRTKWK- 150

Query:   115 KQL 117
             KQL
Sbjct:   151 KQL 153


>UNIPROTKB|E1BS07 [details] [associations]
            symbol:DBX1 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0021521
            "ventral spinal cord interneuron specification" evidence=IEA]
            [GO:0006357 "regulation of transcription from RNA polymerase II
            promoter" evidence=IDA] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0003700 GO:GO:0006357 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
            GeneTree:ENSGT00700000104097 CTD:120237 OMA:YHASPDP
            EMBL:AADN02040078 IPI:IPI00580884 RefSeq:NP_001186403.1
            UniGene:Gga.25865 Ensembl:ENSGALT00000006317 GeneID:422976
            KEGG:gga:422976 NextBio:20825517 Uniprot:E1BS07
        Length = 340

 Score = 126 (49.4 bits), Expect = 1.8e-05, P = 1.8e-05
 Identities = 27/54 (50%), Positives = 39/54 (72%)

Query:    68 QVKALEKNFEVENKL-EPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERD 120
             Q KALEK F+ +  + +P+RK KLA +LGL+  QV +WFQNRR +W+  + ER+
Sbjct:   186 QRKALEKMFQKQKYISKPDRK-KLAAKLGLKDSQVKIWFQNRRMKWRNSK-ERE 237


>UNIPROTKB|A6NMT0 [details] [associations]
            symbol:DBX1 "Homeobox protein DBX1" species:9606 "Homo
            sapiens" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0000976 HOVERGEN:HBG005454 CTD:120237
            EMBL:AC068860 IPI:IPI00027329 RefSeq:NP_001025036.2
            UniGene:Hs.558604 ProteinModelPortal:A6NMT0 SMR:A6NMT0
            PhosphoSite:A6NMT0 PRIDE:A6NMT0 DNASU:120237
            Ensembl:ENST00000524983 GeneID:120237 KEGG:hsa:120237
            UCSC:uc021qey.1 GeneCards:GC11M020177 HGNC:HGNC:33185 HPA:HPA039802
            neXtProt:NX_A6NMT0 PhylomeDB:A6NMT0 GenomeRNAi:120237 NextBio:80553
            ArrayExpress:A6NMT0 Bgee:A6NMT0 CleanEx:HS_DBX1
            Genevestigator:A6NMT0 Uniprot:A6NMT0
        Length = 343

 Score = 126 (49.4 bits), Expect = 1.8e-05, P = 1.8e-05
 Identities = 27/54 (50%), Positives = 39/54 (72%)

Query:    68 QVKALEKNFEVENKL-EPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERD 120
             Q KALEK F+ +  + +P+RK KLA +LGL+  QV +WFQNRR +W+  + ER+
Sbjct:   192 QRKALEKMFQKQKYISKPDRK-KLAAKLGLKDSQVKIWFQNRRMKWRNSK-ERE 243


>UNIPROTKB|F1SFY4 [details] [associations]
            symbol:DBX1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0021521 "ventral
            spinal cord interneuron specification" evidence=IEA] [GO:0006357
            "regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0000976
            "transcription regulatory region sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0003700 GO:GO:0006357 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
            GeneTree:ENSGT00700000104097 OMA:YHASPDP GO:GO:0021521
            EMBL:CU571227 RefSeq:XP_003122964.1 UniGene:Ssc.94783
            Ensembl:ENSSSCT00000014579 GeneID:100520887 KEGG:ssc:100520887
            Uniprot:F1SFY4
        Length = 343

 Score = 126 (49.4 bits), Expect = 1.8e-05, P = 1.8e-05
 Identities = 27/54 (50%), Positives = 39/54 (72%)

Query:    68 QVKALEKNFEVENKL-EPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERD 120
             Q KALEK F+ +  + +P+RK KLA +LGL+  QV +WFQNRR +W+  + ER+
Sbjct:   192 QRKALEKMFQKQKYISKPDRK-KLAAKLGLKDSQVKIWFQNRRMKWRNSK-ERE 243


>UNIPROTKB|A5PKG8 [details] [associations]
            symbol:DBX1 "Homeobox protein DBX1" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0021521 "ventral
            spinal cord interneuron specification" evidence=IEA] [GO:0006357
            "regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0000976
            "transcription regulatory region sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0003700 GO:GO:0006357 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
            GeneTree:ENSGT00700000104097 HOGENOM:HOG000112172
            HOVERGEN:HBG005454 eggNOG:NOG257690 OrthoDB:EOG4T4CW6 EMBL:BC142482
            IPI:IPI00854488 RefSeq:NP_001092468.1 UniGene:Bt.88762
            ProteinModelPortal:A5PKG8 PRIDE:A5PKG8 Ensembl:ENSBTAT00000003543
            GeneID:517514 KEGG:bta:517514 CTD:120237 InParanoid:A5PKG8
            OMA:YHASPDP NextBio:20872455 GO:GO:0021521 Uniprot:A5PKG8
        Length = 345

 Score = 126 (49.4 bits), Expect = 1.9e-05, P = 1.9e-05
 Identities = 27/54 (50%), Positives = 39/54 (72%)

Query:    68 QVKALEKNFEVENKL-EPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERD 120
             Q KALEK F+ +  + +P+RK KLA +LGL+  QV +WFQNRR +W+  + ER+
Sbjct:   193 QRKALEKMFQKQKYISKPDRK-KLAAKLGLKDSQVKIWFQNRRMKWRNSK-ERE 244


>ZFIN|ZDB-GENE-001206-2 [details] [associations]
            symbol:lbx2 "ladybird homeobox homolog 2
            (Drosophila)" species:7955 "Danio rerio" [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0055001
            "muscle cell development" evidence=IMP] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 ZFIN:ZDB-GENE-001206-2 GO:GO:0005634 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 GO:GO:0055001
            HSSP:P13297 HOVERGEN:HBG006244 EMBL:AJ295165 IPI:IPI00511662
            UniGene:Dr.27181 ProteinModelPortal:Q9DD91 InParanoid:Q9DD91
            Uniprot:Q9DD91
        Length = 257

 Score = 123 (48.4 bits), Expect = 2.1e-05, P = 2.1e-05
 Identities = 33/80 (41%), Positives = 46/80 (57%)

Query:    58 SEKKRRLSVD-----QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARW 112
             + KKRR S       Q+  LEK F  +  L P  + ++AQ+LGL   QV  WFQNRRA+ 
Sbjct:   122 ASKKRRKSRTAFTNHQIYELEKRFWYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAK- 180

Query:   113 KTKQLERDYGVLKANYDALK 132
                 L+RD   +KA+ ++LK
Sbjct:   181 ----LKRDLEEMKADVESLK 196


>TAIR|locus:2206880 [details] [associations]
            symbol:HDG11 "AT1G73360" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA;ISS;IDA] [GO:0005634 "nucleus"
            evidence=ISM;IEA;ISS;IDA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0010091 "trichome branching"
            evidence=IGI;IMP] [GO:0005515 "protein binding" evidence=IPI]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            INTERPRO:IPR002913 EMBL:CP002684 GenomeReviews:CT485782_GR
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
            InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
            HOGENOM:HOG000243256 GO:GO:0010091 HSSP:P02836 KO:K09338
            EMBL:AC012396 EMBL:BT003979 EMBL:BT004915 IPI:IPI00520147
            PIR:B96760 RefSeq:NP_177479.1 UniGene:At.34997
            ProteinModelPortal:Q9FX31 SMR:Q9FX31 IntAct:Q9FX31 PaxDb:Q9FX31
            PRIDE:Q9FX31 EnsemblPlants:AT1G73360.1 GeneID:843671
            KEGG:ath:AT1G73360 TAIR:At1g73360 eggNOG:NOG70408 InParanoid:Q9FX31
            OMA:MKLAQRM PhylomeDB:Q9FX31 ProtClustDB:CLSN2679864
            Genevestigator:Q9FX31 Uniprot:Q9FX31
        Length = 722

 Score = 130 (50.8 bits), Expect = 2.1e-05, P = 2.1e-05
 Identities = 31/77 (40%), Positives = 46/77 (59%)

Query:    59 EKKR--RLSVDQVKALEKNF-EVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTK 115
             +KKR  R +  Q++ LE +F E  +  E +R  +L++ELGL PRQ+  WFQNRR + K +
Sbjct:    32 KKKRYHRHTAQQIQRLESSFKECPHPDEKQRN-QLSRELGLAPRQIKFWFQNRRTQLKAQ 90

Query:   116 QLERDYGVLKANYDALK 132
                 D   LKA  D ++
Sbjct:    91 HERADNSALKAENDKIR 107


>UNIPROTKB|H9L2H7 [details] [associations]
            symbol:Gga.20677 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104054 EMBL:AADN02023992
            Ensembl:ENSGALT00000035897 Uniprot:H9L2H7
        Length = 95

 Score = 105 (42.0 bits), Expect = 2.3e-05, P = 2.3e-05
 Identities = 25/74 (33%), Positives = 40/74 (54%)

Query:    58 SEKKRRL--SVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTK 115
             S +K+R   +  Q   LEK F     L  ER++++++ + L  RQV +WFQNRR + K  
Sbjct:    20 SGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQVKIWFQNRRMKLKKM 79

Query:   116 QLERDYGVLKANYD 129
               E     L +N++
Sbjct:    80 NRENRIRELTSNFN 93


>UNIPROTKB|H9L2H8 [details] [associations]
            symbol:Gga.20677 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104054 EMBL:AADN02023992
            Ensembl:ENSGALT00000035898 Uniprot:H9L2H8
        Length = 99

 Score = 105 (42.0 bits), Expect = 2.3e-05, P = 2.3e-05
 Identities = 25/74 (33%), Positives = 40/74 (54%)

Query:    58 SEKKRRL--SVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTK 115
             S +K+R   +  Q   LEK F     L  ER++++++ + L  RQV +WFQNRR + K  
Sbjct:    24 SGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQVKIWFQNRRMKLKKM 83

Query:   116 QLERDYGVLKANYD 129
               E     L +N++
Sbjct:    84 NRENRIRELTSNFN 97


>UNIPROTKB|F1MCF6 [details] [associations]
            symbol:CDX1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060349 "bone
            morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0000976
            "transcription regulatory region sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0009952 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00530000063388 GO:GO:0000976 GO:GO:0060349
            EMBL:DAAA02020624 IPI:IPI00867478 Ensembl:ENSBTAT00000015934
            OMA:MTIKEEY Uniprot:F1MCF6
        Length = 118

 Score = 105 (42.0 bits), Expect = 2.3e-05, P = 2.3e-05
 Identities = 24/54 (44%), Positives = 31/54 (57%)

Query:    59 EKKRRLSVDQVKA-LEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRAR 111
             +K R +  D  +  LEK F     +   RK +LA  LGL  RQV +WFQNRRA+
Sbjct:     8 DKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAK 61


>UNIPROTKB|F1SHT6 [details] [associations]
            symbol:F1SHT6 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104054 EMBL:CU480612
            ProteinModelPortal:F1SHT6 SMR:F1SHT6 Ensembl:ENSSSCT00000018180
            OMA:RRYEISQ Uniprot:F1SHT6
        Length = 93

 Score = 105 (42.0 bits), Expect = 2.3e-05, P = 2.3e-05
 Identities = 26/74 (35%), Positives = 40/74 (54%)

Query:    58 SEKKRRL--SVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTK 115
             S +K+R   +  Q   LEK F     L  ER++++++ + L  RQV +WFQNRR + K  
Sbjct:    18 SGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLKKM 77

Query:   116 QLERDYGVLKANYD 129
               E     L AN++
Sbjct:    78 NRENRIRELTANFN 91


>UNIPROTKB|G3ECA1 [details] [associations]
            symbol:HoxA10 "Homebox A10" species:9823 "Sus scrofa"
            [GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
            DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09295
            GeneTree:ENSGT00700000104054 EMBL:CU570959 EMBL:HQ700342
            RefSeq:NP_001231267.1 UniGene:Ssc.100927 UniGene:Ssc.26254
            SMR:G3ECA1 Ensembl:ENSSSCT00000028043 GeneID:100620451
            KEGG:ssc:100620451 OMA:GNTKGEN Uniprot:G3ECA1
        Length = 94

 Score = 105 (42.0 bits), Expect = 2.3e-05, P = 2.3e-05
 Identities = 26/74 (35%), Positives = 40/74 (54%)

Query:    58 SEKKRRL--SVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTK 115
             S +K+R   +  Q   LEK F     L  ER++++++ + L  RQV +WFQNRR + K  
Sbjct:    19 SGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLKKM 78

Query:   116 QLERDYGVLKANYD 129
               E     L AN++
Sbjct:    79 NRENRIRELTANFN 92


>RGD|621233 [details] [associations]
            symbol:Cdx1 "caudal type homeo box 1" species:10116 "Rattus
            norvegicus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA;TAS] [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0007389
            "pattern specification process" evidence=ISO] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA;ISO]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA;ISO] [GO:0060349 "bone
            morphogenesis" evidence=IEA;ISO] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 RGD:621233 GO:GO:0005634 GO:GO:0009952 GO:GO:0045944
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0000976 GO:GO:0060349 eggNOG:NOG291290
            HOGENOM:HOG000115975 HOVERGEN:HBG005302 OrthoDB:EOG42FSK7
            EMBL:M91450 IPI:IPI00766495 PIR:S27397 ProteinModelPortal:Q05095
            SMR:Q05095 STRING:Q05095 UCSC:RGD:621233 InParanoid:Q05095
            ArrayExpress:Q05095 Genevestigator:Q05095
            GermOnline:ENSRNOG00000018624 Uniprot:Q05095
        Length = 123

 Score = 105 (42.0 bits), Expect = 2.3e-05, P = 2.3e-05
 Identities = 24/54 (44%), Positives = 31/54 (57%)

Query:    59 EKKRRLSVDQVKA-LEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRAR 111
             +K R +  D  +  LEK F     +   RK +LA  LGL  RQV +WFQNRRA+
Sbjct:     6 DKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAK 59


>UNIPROTKB|Q05095 [details] [associations]
            symbol:Cdx1 "Homeobox protein CDX-1" species:10116 "Rattus
            norvegicus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:621233
            GO:GO:0005634 GO:GO:0009952 GO:GO:0045944 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0000976 GO:GO:0060349 eggNOG:NOG291290 HOGENOM:HOG000115975
            HOVERGEN:HBG005302 OrthoDB:EOG42FSK7 EMBL:M91450 IPI:IPI00766495
            PIR:S27397 ProteinModelPortal:Q05095 SMR:Q05095 STRING:Q05095
            UCSC:RGD:621233 InParanoid:Q05095 ArrayExpress:Q05095
            Genevestigator:Q05095 GermOnline:ENSRNOG00000018624 Uniprot:Q05095
        Length = 123

 Score = 105 (42.0 bits), Expect = 2.3e-05, P = 2.3e-05
 Identities = 24/54 (44%), Positives = 31/54 (57%)

Query:    59 EKKRRLSVDQVKA-LEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRAR 111
             +K R +  D  +  LEK F     +   RK +LA  LGL  RQV +WFQNRRA+
Sbjct:     6 DKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAK 59


>WB|WBGene00000428 [details] [associations]
            symbol:ceh-1 species:6239 "Caenorhabditis elegans"
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00660000095141 EMBL:FO080880 EMBL:X52810 PIR:S13128
            PIR:T16081 PIR:T37298 RefSeq:NP_508796.1 ProteinModelPortal:P53547
            SMR:P53547 EnsemblMetazoa:F16H11.4.1 EnsemblMetazoa:F16H11.4.2
            GeneID:191614 KEGG:cel:CELE_F16H11.4 UCSC:F16H11.4 CTD:191614
            WormBase:F16H11.4 eggNOG:NOG286158 HOGENOM:HOG000020299
            InParanoid:P53547 OMA:DANTPQT NextBio:949682 Uniprot:P53547
        Length = 132

 Score = 105 (42.0 bits), Expect = 2.3e-05, P = 2.3e-05
 Identities = 20/47 (42%), Positives = 28/47 (59%)

Query:    67 DQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 113
             +Q+ ALE  F+    L    ++ LA +L L   QV +WFQNRR +WK
Sbjct:    11 EQLVALENKFKTSRYLSVVERLNLAIQLQLSETQVKIWFQNRRTKWK 57


>ZFIN|ZDB-GENE-030328-42 [details] [associations]
            symbol:pnx "posterior neuron-specific homeobox"
            species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 ZFIN:ZDB-GENE-030328-42 GO:GO:0005634 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0000976 HSSP:P13297 HOVERGEN:HBG066288 EMBL:BC162069
            EMBL:BC162454 EMBL:AB067731 IPI:IPI00491629 RefSeq:NP_840087.1
            UniGene:Dr.88552 STRING:Q8AXR6 GeneID:352939 KEGG:dre:352939
            CTD:352939 eggNOG:NOG325253 HOGENOM:HOG000205901 InParanoid:Q8AXR6
            OrthoDB:EOG4H72D8 NextBio:20812680 Uniprot:Q8AXR6
        Length = 182

 Score = 117 (46.2 bits), Expect = 2.5e-05, P = 2.5e-05
 Identities = 25/64 (39%), Positives = 40/64 (62%)

Query:    57 VSEKKRR--LSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKT 114
             V  K+ R   ++DQ++ LE++F+  + L    +  +A  LGL   QV +WFQNRR +WK 
Sbjct:    65 VKSKRIRTAFTLDQLRILERSFQSSHYLSVFERHCIASALGLSETQVKIWFQNRRTKWK- 123

Query:   115 KQLE 118
             K+L+
Sbjct:   124 KELD 127


>RGD|1307280 [details] [associations]
            symbol:Nkx6-2 "NK6 homeobox 2" species:10116 "Rattus norvegicus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA;ISO] [GO:0000976
            "transcription regulatory region sequence-specific DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA;ISO] [GO:0005634
            "nucleus" evidence=IEA;ISO] [GO:0010454 "negative regulation of
            cell fate commitment" evidence=IEA;ISO] [GO:0010455 "positive
            regulation of cell fate commitment" evidence=IEA;ISO] [GO:0021912
            "regulation of transcription from RNA polymerase II promoter
            involved in spinal cord motor neuron fate specification"
            evidence=IEA;ISO] [GO:0021913 "regulation of transcription from RNA
            polymerase II promoter involved in ventral spinal cord interneuron
            specification" evidence=IEA;ISO] [GO:0022010 "central nervous
            system myelination" evidence=IEA;ISO] [GO:0030154 "cell
            differentiation" evidence=ISO] [GO:0031018 "endocrine pancreas
            development" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
            binding" evidence=ISO] [GO:0045686 "negative regulation of glial
            cell differentiation" evidence=IEA;ISO] [GO:0045687 "positive
            regulation of glial cell differentiation" evidence=IEA;ISO]
            [GO:0048709 "oligodendrocyte differentiation" evidence=ISO]
            [GO:0050885 "neuromuscular process controlling balance"
            evidence=IEA;ISO] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:1307280
            GO:GO:0005634 GO:GO:0050885 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
            GO:GO:0022010 GO:GO:0031018 GO:GO:0000976 EMBL:CH473953
            GeneTree:ENSGT00680000099625 GO:GO:0021913 GO:GO:0045687
            GO:GO:0045686 GO:GO:0010455 GO:GO:0010454 OrthoDB:EOG4JT064
            GO:GO:0021912 CTD:84504 KO:K09350 OMA:GPAGFKA IPI:IPI00779623
            RefSeq:NP_001101028.1 UniGene:Rn.222182 SMR:D3ZZX2
            Ensembl:ENSRNOT00000054887 GeneID:309095 KEGG:rno:309095
            UCSC:RGD:1307280 NextBio:660104 Uniprot:D3ZZX2
        Length = 277

 Score = 123 (48.4 bits), Expect = 2.5e-05, P = 2.5e-05
 Identities = 31/82 (37%), Positives = 42/82 (51%)

Query:    65 SVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQL-ERDYGV 123
             S  Q+ ALEK FE    L    + +LA  LG+   QV VWFQNRR +W+ +   E     
Sbjct:   156 SGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKRHAAEMASAK 215

Query:   124 LKANYDA--LKLNYDSLQHDNE 143
              K + DA  LK+     + D+E
Sbjct:   216 KKQDSDAEKLKVGGSDAEDDDE 237


>UNIPROTKB|E1BAF5 [details] [associations]
            symbol:BSX "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0060056 "mammary gland involution" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0042755 "eating
            behavior" evidence=IEA] [GO:0007626 "locomotory behavior"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667
            "transcription factor complex" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005737 GO:GO:0043565 GO:GO:0045944
            GO:GO:0042755 GO:GO:0007626 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
            GO:GO:0060056 GeneTree:ENSGT00700000104097 CTD:390259 OMA:LHKPEHH
            EMBL:DAAA02040563 IPI:IPI00701228 RefSeq:NP_001179998.1
            UniGene:Bt.106481 Ensembl:ENSBTAT00000018597 GeneID:615347
            KEGG:bta:615347 NextBio:20899575 Uniprot:E1BAF5
        Length = 232

 Score = 121 (47.7 bits), Expect = 2.6e-05, P = 2.6e-05
 Identities = 30/73 (41%), Positives = 38/73 (52%)

Query:    56 HVSEKKRR--LSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 113
             H   +K R   S  Q+  LEK FE++  L    +V+LA  L L   QV  WFQNRR + K
Sbjct:   107 HCRRRKARTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHK 166

Query:   114 TKQLERDYGVLKA 126
              KQL +     KA
Sbjct:   167 -KQLRKSQDEPKA 178


>UNIPROTKB|E2R0R6 [details] [associations]
            symbol:BSX "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0060056 "mammary gland involution"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0042755 "eating
            behavior" evidence=IEA] [GO:0007626 "locomotory behavior"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667
            "transcription factor complex" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005737 GO:GO:0043565 GO:GO:0045944
            GO:GO:0042755 GO:GO:0007626 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
            GO:GO:0060056 GeneTree:ENSGT00700000104097 CTD:390259 OMA:LHKPEHH
            EMBL:AAEX03003408 RefSeq:XP_546472.2 ProteinModelPortal:E2R0R6
            Ensembl:ENSCAFT00000018539 GeneID:489354 KEGG:cfa:489354
            NextBio:20862533 Uniprot:E2R0R6
        Length = 232

 Score = 121 (47.7 bits), Expect = 2.6e-05, P = 2.6e-05
 Identities = 30/73 (41%), Positives = 38/73 (52%)

Query:    56 HVSEKKRR--LSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 113
             H   +K R   S  Q+  LEK FE++  L    +V+LA  L L   QV  WFQNRR + K
Sbjct:   107 HCRRRKARTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHK 166

Query:   114 TKQLERDYGVLKA 126
              KQL +     KA
Sbjct:   167 -KQLRKSQDEPKA 178


>UNIPROTKB|F1S9Q4 [details] [associations]
            symbol:BSX "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0060056 "mammary gland involution" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0042755 "eating
            behavior" evidence=IEA] [GO:0007626 "locomotory behavior"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667
            "transcription factor complex" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005737 GO:GO:0043565 GO:GO:0045944
            GO:GO:0042755 GO:GO:0007626 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
            GO:GO:0060056 GeneTree:ENSGT00700000104097 OMA:LHKPEHH
            EMBL:CU570649 RefSeq:XP_003482678.1 Ensembl:ENSSSCT00000016505
            GeneID:100738917 KEGG:ssc:100738917 Uniprot:F1S9Q4
        Length = 232

 Score = 121 (47.7 bits), Expect = 2.6e-05, P = 2.6e-05
 Identities = 30/73 (41%), Positives = 38/73 (52%)

Query:    56 HVSEKKRR--LSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 113
             H   +K R   S  Q+  LEK FE++  L    +V+LA  L L   QV  WFQNRR + K
Sbjct:   107 HCRRRKARTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHK 166

Query:   114 TKQLERDYGVLKA 126
              KQL +     KA
Sbjct:   167 -KQLRKSQDEPKA 178


>MGI|MGI:2669849 [details] [associations]
            symbol:Bsx "brain specific homeobox" species:10090 "Mus
            musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005667 "transcription
            factor complex" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0007626 "locomotory behavior" evidence=IMP]
            [GO:0042755 "eating behavior" evidence=IMP] [GO:0043565
            "sequence-specific DNA binding" evidence=IDA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IGI;IDA] [GO:0060056 "mammary gland involution"
            evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 MGI:MGI:2669849 GO:GO:0005737 GO:GO:0007420
            GO:GO:0043565 GO:GO:0045944 GO:GO:0042755 GO:GO:0007626
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0060056
            GeneTree:ENSGT00700000104097 HOGENOM:HOG000231924 CTD:390259
            eggNOG:NOG242366 HOVERGEN:HBG050738 OMA:LHKPEHH OrthoDB:EOG4KKZ41
            EMBL:AY233396 EMBL:BC104386 EMBL:BC104387 IPI:IPI00329841
            IPI:IPI00857232 RefSeq:NP_839976.1 UniGene:Mm.261652
            ProteinModelPortal:Q810B3 SMR:Q810B3 STRING:Q810B3
            PhosphoSite:Q810B3 PRIDE:Q810B3 Ensembl:ENSMUST00000067375
            GeneID:244813 KEGG:mmu:244813 UCSC:uc009paa.1 InParanoid:Q3SXB1
            NextBio:386432 Bgee:Q810B3 CleanEx:MM_BSX Genevestigator:Q810B3
            Uniprot:Q810B3
        Length = 232

 Score = 121 (47.7 bits), Expect = 2.6e-05, P = 2.6e-05
 Identities = 30/73 (41%), Positives = 38/73 (52%)

Query:    56 HVSEKKRR--LSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 113
             H   +K R   S  Q+  LEK FE++  L    +V+LA  L L   QV  WFQNRR + K
Sbjct:   107 HCRRRKARTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHK 166

Query:   114 TKQLERDYGVLKA 126
              KQL +     KA
Sbjct:   167 -KQLRKSQDEPKA 178


>RGD|1565120 [details] [associations]
            symbol:Bsx "brain specific homeobox" species:10116 "Rattus
            norvegicus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA;ISO] [GO:0005634
            "nucleus" evidence=ISO] [GO:0005667 "transcription factor complex"
            evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
            [GO:0007626 "locomotory behavior" evidence=IEA;ISO] [GO:0042755
            "eating behavior" evidence=IEA;ISO] [GO:0043565 "sequence-specific
            DNA binding" evidence=IEA;ISO] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA;ISO]
            [GO:0060056 "mammary gland involution" evidence=IEA;ISO]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            RGD:1565120 GO:GO:0005737 GO:GO:0043565 GO:GO:0045944 GO:GO:0042755
            GO:GO:0007626 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0060056
            GeneTree:ENSGT00700000104097 CTD:390259 OMA:LHKPEHH
            OrthoDB:EOG4KKZ41 IPI:IPI00369244 RefSeq:NP_001178924.1
            UniGene:Rn.228217 Ensembl:ENSRNOT00000028909 GeneID:500982
            KEGG:rno:500982 UCSC:RGD:1565120 NextBio:707867 Uniprot:D4A5F6
        Length = 232

 Score = 121 (47.7 bits), Expect = 2.6e-05, P = 2.6e-05
 Identities = 30/73 (41%), Positives = 38/73 (52%)

Query:    56 HVSEKKRR--LSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 113
             H   +K R   S  Q+  LEK FE++  L    +V+LA  L L   QV  WFQNRR + K
Sbjct:   107 HCRRRKARTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHK 166

Query:   114 TKQLERDYGVLKA 126
              KQL +     KA
Sbjct:   167 -KQLRKSQDEPKA 178


>UNIPROTKB|Q3C1V8 [details] [associations]
            symbol:BSX "Brain-specific homeobox protein homolog"
            species:9606 "Homo sapiens" [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0005667
            "transcription factor complex" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0007626 "locomotory behavior"
            evidence=IEA] [GO:0042755 "eating behavior" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0060056 "mammary gland
            involution" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0005737 GO:GO:0043565 GO:GO:0045944
            GO:GO:0042755 GO:GO:0007626 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0005667 GO:GO:0060056 HOGENOM:HOG000231924 CTD:390259
            eggNOG:NOG242366 HOVERGEN:HBG050738 OMA:LHKPEHH OrthoDB:EOG4KKZ41
            EMBL:AP003040 EMBL:AB231738 IPI:IPI00847613 RefSeq:NP_001091639.1
            UniGene:Hs.449687 ProteinModelPortal:Q3C1V8 SMR:Q3C1V8
            STRING:Q3C1V8 PhosphoSite:Q3C1V8 DMDM:156630463 PRIDE:Q3C1V8
            Ensembl:ENST00000343035 GeneID:390259 KEGG:hsa:390259
            UCSC:uc010rzs.2 GeneCards:GC11M122848 HGNC:HGNC:20450 HPA:HPA015654
            MIM:611074 neXtProt:NX_Q3C1V8 PharmGKB:PA162377618
            InParanoid:Q3C1V8 PhylomeDB:Q3C1V8 GenomeRNAi:390259 NextBio:103586
            Bgee:Q3C1V8 CleanEx:HS_BSX Genevestigator:Q3C1V8 Uniprot:Q3C1V8
        Length = 233

 Score = 121 (47.7 bits), Expect = 2.6e-05, P = 2.6e-05
 Identities = 30/73 (41%), Positives = 38/73 (52%)

Query:    56 HVSEKKRR--LSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 113
             H   +K R   S  Q+  LEK FE++  L    +V+LA  L L   QV  WFQNRR + K
Sbjct:   107 HCRRRKARTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHK 166

Query:   114 TKQLERDYGVLKA 126
              KQL +     KA
Sbjct:   167 -KQLRKSQDEPKA 178


>UNIPROTKB|F6Q274 [details] [associations]
            symbol:F6Q274 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GO:GO:0000976 GeneTree:ENSGT00700000104206
            OrthoDB:EOG4TTGJP EMBL:CU498958 Ensembl:ENSSSCT00000011554
            OMA:CGSEDED Uniprot:F6Q274
        Length = 280

 Score = 123 (48.4 bits), Expect = 2.6e-05, P = 2.6e-05
 Identities = 34/86 (39%), Positives = 47/86 (54%)

Query:    60 KKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLER 119
             K R  +  Q+  LEK F  +  L P  + ++AQ+LGL   QV  WFQNRRA+     L+R
Sbjct:   127 KSRTFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAK-----LKR 181

Query:   120 DYGVLKANYDALKLNYDSLQHDNEAL 145
             D   +KA+ ++ K    S Q D  AL
Sbjct:   182 DLEEMKADVESPKKLGPSGQMDIVAL 207


>UNIPROTKB|J9P8I3 [details] [associations]
            symbol:NKX6-2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
            GeneTree:ENSGT00680000099625 OMA:GPAGFKA EMBL:AAEX03015714
            Ensembl:ENSCAFT00000048528 Uniprot:J9P8I3
        Length = 281

 Score = 123 (48.4 bits), Expect = 2.6e-05, P = 2.6e-05
 Identities = 31/82 (37%), Positives = 42/82 (51%)

Query:    65 SVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQL-ERDYGV 123
             S  Q+ ALEK FE    L    + +LA  LG+   QV VWFQNRR +W+ +   E     
Sbjct:   161 SGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKRHAAEMASAK 220

Query:   124 LKANYDA--LKLNYDSLQHDNE 143
              K + DA  LK+     + D+E
Sbjct:   221 KKQDSDAEKLKVGGSDAEDDDE 242


>ZFIN|ZDB-GENE-080204-54 [details] [associations]
            symbol:hmx1 "H6 homeo box 1" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0043010 "camera-type
            eye development" evidence=IMP] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-080204-54 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0043010
            GeneTree:ENSGT00700000104333 EMBL:AL929576 EMBL:EU203551
            IPI:IPI00884721 UniGene:Dr.45660 Ensembl:ENSDART00000113087
            HOVERGEN:HBG101086 Uniprot:B2KTE5
        Length = 282

 Score = 123 (48.4 bits), Expect = 2.7e-05, P = 2.7e-05
 Identities = 31/86 (36%), Positives = 45/86 (52%)

Query:    59 EKKRR--LSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQ 116
             +KK R   S  QV  LE  F+++  L    +  LA  L L   QV +WFQNRR +WK +Q
Sbjct:   150 KKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAASLHLTETQVKIWFQNRRNKWK-RQ 208

Query:   117 LERDYGVLKANYDALKL-NYDSLQHD 141
             L  D   +  N+++ ++     L HD
Sbjct:   209 LAADLEAVNFNHNSQRIVRVPILYHD 234


>UNIPROTKB|F1NF72 [details] [associations]
            symbol:F1NF72 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0009953
            "dorsal/ventral pattern formation" evidence=IEA] [GO:0009954
            "proximal/distal pattern formation" evidence=IEA] [GO:0030901
            "midbrain development" evidence=IEA] [GO:0030902 "hindbrain
            development" evidence=IEA] [GO:0030917 "midbrain-hindbrain boundary
            development" evidence=IEA] [GO:0035115 "embryonic forelimb
            morphogenesis" evidence=IEA] [GO:0043473 "pigmentation"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0048666 "neuron
            development" evidence=IEA] InterPro:IPR000047 InterPro:IPR000747
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00026 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0000976 GeneTree:ENSGT00680000099870
            PROSITE:PS00033 InterPro:IPR019549 InterPro:IPR019737 Pfam:PF10525
            EMBL:AADN02016916 IPI:IPI00812139 Ensembl:ENSGALT00000019794
            OMA:ASNDEKR Uniprot:F1NF72
        Length = 100

 Score = 104 (41.7 bits), Expect = 2.9e-05, P = 2.9e-05
 Identities = 20/57 (35%), Positives = 35/57 (61%)

Query:    59 EKKRR--LSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 113
             +K+ R   + +Q++ L+  F+    +  +R+  LAQEL L   Q+ +WFQN+RA+ K
Sbjct:     3 DKRPRTAFTAEQLQRLKAEFQANRYITEQRRQSLAQELSLNESQIKIWFQNKRAKIK 59


>UNIPROTKB|F1P4V0 [details] [associations]
            symbol:F1P4V0 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0048706 "embryonic skeletal system development"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104161 EMBL:AADN02020016 IPI:IPI00596552
            Ensembl:ENSGALT00000015078 OMA:VKENQIS Uniprot:F1P4V0
        Length = 67

 Score = 104 (41.7 bits), Expect = 2.9e-05, P = 2.9e-05
 Identities = 22/54 (40%), Positives = 32/54 (59%)

Query:    65 SVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLE 118
             S  Q+  LEK F     L   R++++A+ L L+  QV VWFQNRR + K ++ E
Sbjct:     9 STRQLTELEKEFHFSRYLSRARRLEVARSLRLRDAQVKVWFQNRRMKQKKRERE 62


>UNIPROTKB|P15142 [details] [associations]
            symbol:CHOX-7 "Homeobox protein CHOX-7" species:9031
            "Gallus gallus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 EMBL:X16159 IPI:IPI00683482 PIR:S05005
            UniGene:Gga.190 ProteinModelPortal:P15142 SMR:P15142
            HOVERGEN:HBG100178 Uniprot:P15142
        Length = 124

 Score = 104 (41.7 bits), Expect = 2.9e-05, P = 2.9e-05
 Identities = 22/56 (39%), Positives = 33/56 (58%)

Query:    60 KKRRLSV--DQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 113
             ++RR +   +Q+  LEK F  +  L    + ++A  L L   QV +WFQNRRA+WK
Sbjct:    25 RRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWK 80


>RGD|1588601 [details] [associations]
            symbol:Hoxd3 "homeo box D3" species:10116 "Rattus norvegicus"
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA;ISO]
            [GO:0007160 "cell-matrix adhesion" evidence=IEA;ISO] [GO:0007219
            "Notch signaling pathway" evidence=IEA;ISO] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA;ISO]
            [GO:0010628 "positive regulation of gene expression"
            evidence=IEA;ISO] [GO:0021615 "glossopharyngeal nerve
            morphogenesis" evidence=IEA;ISO] [GO:0030878 "thyroid gland
            development" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0045666 "positive regulation of neuron
            differentiation" evidence=IEA;ISO] [GO:0048704 "embryonic skeletal
            system morphogenesis" evidence=IEA;ISO] [GO:0051216 "cartilage
            development" evidence=IEA;ISO] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1588601
            GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 eggNOG:NOG284589 EMBL:M37569 IPI:IPI00195537
            PIR:E43559 UniGene:Rn.223085 ProteinModelPortal:P18867 SMR:P18867
            STRING:P18867 UCSC:RGD:1588601 HOVERGEN:HBG052632
            Genevestigator:P18867 Uniprot:P18867
        Length = 114

 Score = 104 (41.7 bits), Expect = 2.9e-05, P = 2.9e-05
 Identities = 23/57 (40%), Positives = 33/57 (57%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVL 124
             Q+  LEK F     L   R+V++A  L L  RQ+ +WFQNRR ++K  Q  +  G+L
Sbjct:    22 QLVELEKEFHFNRYLCRRRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAK--GIL 76


>UNIPROTKB|P18867 [details] [associations]
            symbol:Hoxd3 "Homeobox protein Hox-D3" species:10116
            "Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1588601
            GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 eggNOG:NOG284589 EMBL:M37569 IPI:IPI00195537
            PIR:E43559 UniGene:Rn.223085 ProteinModelPortal:P18867 SMR:P18867
            STRING:P18867 UCSC:RGD:1588601 HOVERGEN:HBG052632
            Genevestigator:P18867 Uniprot:P18867
        Length = 114

 Score = 104 (41.7 bits), Expect = 2.9e-05, P = 2.9e-05
 Identities = 23/57 (40%), Positives = 33/57 (57%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVL 124
             Q+  LEK F     L   R+V++A  L L  RQ+ +WFQNRR ++K  Q  +  G+L
Sbjct:    22 QLVELEKEFHFNRYLCRRRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAK--GIL 76


>UNIPROTKB|Q6ZNG2 [details] [associations]
            symbol:DBX2 "Homeobox protein DBX2" species:9606 "Homo
            sapiens" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0000976 eggNOG:NOG270330 HSSP:P06602 HOGENOM:HOG000112172
            CTD:440097 HOVERGEN:HBG104467 OMA:GTRWAFQ OrthoDB:EOG4MPHQG
            EMBL:AK131230 EMBL:AC008127 EMBL:AC079033 EMBL:AC089986
            IPI:IPI00418609 RefSeq:NP_001004329.2 UniGene:Hs.302764
            ProteinModelPortal:Q6ZNG2 SMR:Q6ZNG2 STRING:Q6ZNG2
            PhosphoSite:Q6ZNG2 DMDM:296434473 PRIDE:Q6ZNG2 DNASU:440097
            Ensembl:ENST00000332700 GeneID:440097 KEGG:hsa:440097
            UCSC:uc001rok.1 GeneCards:GC12M045408 HGNC:HGNC:33186
            neXtProt:NX_Q6ZNG2 PharmGKB:PA162383249 InParanoid:Q6ZNG2
            GenomeRNAi:440097 NextBio:108942 Bgee:Q6ZNG2 CleanEx:HS_DBX2
            Genevestigator:Q6ZNG2 Uniprot:Q6ZNG2
        Length = 339

 Score = 123 (48.4 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
 Identities = 26/55 (47%), Positives = 36/55 (65%)

Query:    65 SVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK-TKQLE 118
             S DQ KALEK F+ +  +    + KLA  LGL+  QV +WFQNRR +W+ +K+ E
Sbjct:   194 SEDQRKALEKMFQKQKYISKTDRKKLAINLGLKESQVKIWFQNRRMKWRNSKEKE 248

 Score = 38 (18.4 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
 Identities = 8/26 (30%), Positives = 14/26 (53%)

Query:    16 MSICPATDEQSPRNNQVYSR-EFQTM 40
             + +CPA ++ SP      +R  FQ +
Sbjct:    83 LKLCPAAEQVSPAGAPYGTRWAFQVL 108


>UNIPROTKB|F1NZJ4 [details] [associations]
            symbol:HOXD8 "Homeobox protein Hox-D8" species:9031 "Gallus
            gallus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
            GeneTree:ENSGT00700000104054 EMBL:AADN02020025 EMBL:AADN02020026
            EMBL:AADN02020027 EMBL:AADN02020028 EMBL:AADN02020029
            EMBL:AADN02020030 IPI:IPI00818317 Ensembl:ENSGALT00000038689
            ArrayExpress:F1NZJ4 Uniprot:F1NZJ4
        Length = 168

 Score = 114 (45.2 bits), Expect = 3.0e-05, P = 3.0e-05
 Identities = 23/53 (43%), Positives = 33/53 (62%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERD 120
             Q   LEK F     L  +R+++++  LGL  RQV +WFQNRR +WK K+  +D
Sbjct:    86 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-KENNKD 137


>UNIPROTKB|F7ENZ5 [details] [associations]
            symbol:NKX3-1 "Uncharacterized protein" species:9258
            "Ornithorhynchus anatinus" [GO:0000976 "transcription regulatory
            region sequence-specific DNA binding" evidence=ISS] [GO:0000988
            "protein binding transcription factor activity" evidence=ISS]
            [GO:0001047 "core promoter binding" evidence=ISS] [GO:0001934
            "positive regulation of protein phosphorylation" evidence=ISS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=ISS] [GO:0004882 "androgen receptor activity"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006919
            "activation of cysteine-type endopeptidase activity involved in
            apoptotic process" evidence=ISS] [GO:0007431 "salivary gland
            development" evidence=ISS] [GO:0008284 "positive regulation of cell
            proliferation" evidence=ISS] [GO:0008285 "negative regulation of
            cell proliferation" evidence=ISS] [GO:0010628 "positive regulation
            of gene expression" evidence=ISS] [GO:0010942 "positive regulation
            of cell death" evidence=ISS] [GO:0014068 "positive regulation of
            phosphatidylinositol 3-kinase cascade" evidence=ISS] [GO:0030284
            "estrogen receptor activity" evidence=ISS] [GO:0030295 "protein
            kinase activator activity" evidence=ISS] [GO:0030331 "estrogen
            receptor binding" evidence=ISS] [GO:0030521 "androgen receptor
            signaling pathway" evidence=ISS] [GO:0033574 "response to
            testosterone stimulus" evidence=ISS] [GO:0043280 "positive
            regulation of cysteine-type endopeptidase activity involved in
            apoptotic process" evidence=ISS] [GO:0043491 "protein kinase B
            signaling cascade" evidence=ISS] [GO:0043569 "negative regulation
            of insulin-like growth factor receptor signaling pathway"
            evidence=ISS] [GO:0043621 "protein self-association" evidence=ISS]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=ISS] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0045931 "positive regulation of
            mitotic cell cycle" evidence=ISS] [GO:0045944 "positive regulation
            of transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0048754 "branching morphogenesis of an epithelial tube"
            evidence=ISS] [GO:0050680 "negative regulation of epithelial cell
            proliferation" evidence=ISS] [GO:0051781 "positive regulation of
            cell division" evidence=ISS] [GO:0060442 "branching involved in
            prostate gland morphogenesis" evidence=ISS] [GO:0060664 "epithelial
            cell proliferation involved in salivary gland morphogenesis"
            evidence=ISS] [GO:0060770 "negative regulation of epithelial cell
            proliferation involved in prostate gland development" evidence=ISS]
            [GO:0071383 "cellular response to steroid hormone stimulus"
            evidence=ISS] [GO:0071899 "negative regulation of estrogen receptor
            binding" evidence=ISS] [GO:2000836 "positive regulation of androgen
            secretion" evidence=ISS] [GO:2001022 "positive regulation of
            response to DNA damage stimulus" evidence=ISS] [GO:2001244
            "positive regulation of intrinsic apoptotic signaling pathway"
            evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0045892 GO:GO:0045931
            GO:GO:0008284 GO:GO:0051781 GO:GO:0045944 GO:GO:0071456
            GO:GO:0014068 GO:GO:0030295 GO:GO:0043621 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0006919
            GO:GO:0035690 GO:GO:0010942 GO:GO:0033574 GO:GO:0001047
            GO:GO:0008656 GO:GO:0043491 GO:GO:0000976 GO:GO:0004882
            GO:GO:0071347 GO:GO:0071356 GO:GO:0030331 GO:GO:0000983
            GO:GO:0060770 GO:GO:2001244 GO:GO:0043569 GO:GO:0048754
            GeneTree:ENSGT00700000104206 GO:GO:0045930 GO:GO:2001022
            GO:GO:0060442 GO:GO:0071850 GO:GO:0000988 GO:GO:0030284
            GO:GO:0060664 GO:GO:0071899 GO:GO:2000836 OMA:YCLGGWN
            EMBL:AAPN01142035 EMBL:AAPN01142036 EMBL:AAPN01142037
            EMBL:AAPN01142038 EMBL:AAPN01142039 EMBL:AAPN01142040
            EMBL:AAPN01142041 EMBL:AAPN01142042 EMBL:AAPN01142043
            EMBL:AAPN01142044 EMBL:AAPN01142045 EMBL:AAPN01142046
            EMBL:AAPN01142047 Ensembl:ENSOANT00000012766 Uniprot:F7ENZ5
        Length = 180

 Score = 116 (45.9 bits), Expect = 3.0e-05, P = 3.0e-05
 Identities = 29/71 (40%), Positives = 36/71 (50%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKAN 127
             QV  LE+ F  +  L    +  LA+ L L   QV +WFQNRR + K KQL  D G L  N
Sbjct:    81 QVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTKRKQLTSDLGDLDPN 140

Query:   128 YDALKLNYDSL 138
                  L  +SL
Sbjct:   141 STLPGLKEESL 151


>UNIPROTKB|F1S9I5 [details] [associations]
            symbol:HLX "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048557 "embryonic
            digestive tract morphogenesis" evidence=IEA] [GO:0048484 "enteric
            nervous system development" evidence=IEA] [GO:0046622 "positive
            regulation of organ growth" evidence=IEA] [GO:0045629 "negative
            regulation of T-helper 2 cell differentiation" evidence=IEA]
            [GO:0045627 "positive regulation of T-helper 1 cell
            differentiation" evidence=IEA] [GO:0008284 "positive regulation of
            cell proliferation" evidence=IEA] [GO:0007519 "skeletal muscle
            tissue development" evidence=IEA] [GO:0001889 "liver development"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0000976
            "transcription regulatory region sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0008284 GO:GO:0001889 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0046622
            GO:GO:0000976 GO:GO:0048484 GeneTree:ENSGT00700000104097
            GO:GO:0045629 GO:GO:0007519 GO:GO:0045627 GO:GO:0048557 OMA:ESTQAPL
            EMBL:CU855622 Ensembl:ENSSSCT00000011848 Uniprot:F1S9I5
        Length = 245

 Score = 121 (47.7 bits), Expect = 3.1e-05, P = 3.1e-05
 Identities = 28/57 (49%), Positives = 37/57 (64%)

Query:    68 QVKALEKNFEVENKL-EPERKVKLAQELGLQPRQVAVWFQNRRARW---KTKQLERD 120
             Q K LEK FE++  + +P+RK +LA  LGL   QV VWFQNRR +W   K  Q ++D
Sbjct:    45 QRKGLEKRFEIQKYVTKPDRK-QLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQKD 100


>ZFIN|ZDB-GENE-040628-4 [details] [associations]
            symbol:bsx "brain specific homeobox" species:7955
            "Danio rerio" [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0007420 "brain development" evidence=ISS]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            ZFIN:ZDB-GENE-040628-4 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104097 EMBL:BX120005 IPI:IPI00931915
            Ensembl:ENSDART00000090003 Uniprot:F1R6K5
        Length = 245

 Score = 121 (47.7 bits), Expect = 3.1e-05, P = 3.1e-05
 Identities = 34/95 (35%), Positives = 48/95 (50%)

Query:    56 HVSEKKRR--LSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 113
             H   +K R   S  Q+  LEK FE++  L    +V+LA  L L   QV  WFQNRR + K
Sbjct:   120 HCRRRKARTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHK 179

Query:   114 TKQLERDYGVLKANYDALKLNYDSLQHDNEALLKE 148
              KQL +     K   D  +    SL++ +E+ + E
Sbjct:   180 -KQLRKTQDDQKTPNDVDR----SLENTSESEMHE 209


>UNIPROTKB|F1P2W4 [details] [associations]
            symbol:NKX6-2 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0000976 GeneTree:ENSGT00680000099625 EMBL:AADN02047157
            EMBL:AADN02047158 IPI:IPI00822098 Ensembl:ENSGALT00000038553
            Uniprot:F1P2W4
        Length = 250

 Score = 121 (47.7 bits), Expect = 3.3e-05, P = 3.3e-05
 Identities = 31/87 (35%), Positives = 44/87 (50%)

Query:    65 SVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVL 124
             S  Q+ ALEK FE    L    + +LA  LG+   QV VWFQNRR +W+ K+   +    
Sbjct:   137 SGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWR-KRHAAEMASA 195

Query:   125 KANYDAL--KLNYDSLQHDNEALLKEI 149
             K  +D+   KL   S   D++   K +
Sbjct:   196 KKKHDSETEKLKESSDNEDDDEYNKPL 222


>FB|FBgn0038852 [details] [associations]
            symbol:CG7056 species:7227 "Drosophila melanogaster"
            [GO:0005634 "nucleus" evidence=ISS] [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=ISS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
            [GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 EMBL:AE014297 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048813
            GeneTree:ENSGT00680000099625 RefSeq:NP_650938.2 UniGene:Dm.27358
            ProteinModelPortal:Q9VDF0 SMR:Q9VDF0 DIP:DIP-18460N IntAct:Q9VDF0
            MINT:MINT-281000 EnsemblMetazoa:FBtr0084037 GeneID:42495
            KEGG:dme:Dmel_CG7056 UCSC:CG7056-RA FlyBase:FBgn0038852
            InParanoid:Q9VDF0 OMA:QIRFTSQ OrthoDB:EOG4RBP28 PhylomeDB:Q9VDF0
            GenomeRNAi:42495 NextBio:829091 ArrayExpress:Q9VDF0 Bgee:Q9VDF0
            Uniprot:Q9VDF0
        Length = 323

 Score = 121 (47.7 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
 Identities = 25/57 (43%), Positives = 31/57 (54%)

Query:    63 RLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLER 119
             R +  Q K LE  F     L PE +  LA +L L  RQV  WFQNRRA+W+   L +
Sbjct:   200 RFTSQQTKNLEARFASSKYLSPEERRHLALQLKLTDRQVKTWFQNRRAKWRRANLSK 256

 Score = 39 (18.8 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
 Identities = 6/19 (31%), Positives = 12/19 (63%)

Query:   176 ETDHQNKATLDRDQESDDK 194
             ++D +++  L  D E DD+
Sbjct:   295 QSDEEDRMYLSEDDEDDDE 313


>FB|FBgn0034520 [details] [associations]
            symbol:lms "lateral muscles scarcer" species:7227 "Drosophila
            melanogaster" [GO:0005634 "nucleus" evidence=ISS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0060361 "flight" evidence=IMP]
            [GO:0007526 "larval somatic muscle development" evidence=IMP]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            EMBL:AE013599 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0007526 GeneTree:ENSGT00700000104206 GO:GO:0060361
            RefSeq:NP_611491.1 UniGene:Dm.36477 ProteinModelPortal:A1ZBV6
            SMR:A1ZBV6 PRIDE:A1ZBV6 EnsemblMetazoa:FBtr0086218 GeneID:37322
            KEGG:dme:Dmel_CG13424 UCSC:CG13424-RA CTD:37322 FlyBase:FBgn0034520
            eggNOG:NOG290719 InParanoid:A1ZBV6 OMA:PIQSIML OrthoDB:EOG4BVQ95
            PhylomeDB:A1ZBV6 GenomeRNAi:37322 NextBio:803112 Bgee:A1ZBV6
            Uniprot:A1ZBV6
        Length = 411

 Score = 125 (49.1 bits), Expect = 3.3e-05, P = 3.3e-05
 Identities = 30/74 (40%), Positives = 40/74 (54%)

Query:    60 KKR---RLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQ 116
             KKR     S  Q+KALE  FE    L   ++  LA++L L   Q+ +WFQNRR +WK K 
Sbjct:   119 KKRPRTAFSAAQIKALETEFERGKYLSVAKRTALAKQLQLTETQIKIWFQNRRTKWKRKY 178

Query:   117 LERDYGVLKANYDA 130
                D   L ++Y A
Sbjct:   179 TS-DVETLASHYYA 191


>FB|FBgn0014949 [details] [associations]
            symbol:btn "buttonless" species:7227 "Drosophila
            melanogaster" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISS] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=ISS] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 HSSP:P14653 EMBL:S75228 ProteinModelPortal:Q26381
            FlyBase:FBgn0014949 InParanoid:Q26381 OrthoDB:EOG4RFJ98
            Uniprot:Q26381
        Length = 158

 Score = 111 (44.1 bits), Expect = 3.5e-05, P = 3.5e-05
 Identities = 29/67 (43%), Positives = 36/67 (53%)

Query:    58 SEKKRR--LSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTK 115
             S +K R   S  Q+K LE  F   N L   R+ ++A  L L  RQV VWFQNRR + K  
Sbjct:    85 SNRKERTAFSKTQLKQLEAEFCYSNYLTRLRRYEIAVALELTERQVKVWFQNRRMKCKRI 144

Query:   116 QLERDYG 122
             +LE   G
Sbjct:   145 KLEEQQG 151


>UNIPROTKB|P24341 [details] [associations]
            symbol:HOXD10 "Homeobox protein Hox-D10" species:9031
            "Gallus gallus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 EMBL:D10287 IPI:IPI00593695
            PIR:A37914 UniGene:Gga.20677 ProteinModelPortal:P24341 SMR:P24341
            eggNOG:KOG0487 Uniprot:P24341
        Length = 95

 Score = 103 (41.3 bits), Expect = 3.8e-05, P = 3.8e-05
 Identities = 26/72 (36%), Positives = 38/72 (52%)

Query:    58 SEKKRRL--SVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTK 115
             S +K+R   +  Q   LEK F     L  ER++++++ + L  RQV +WFQNRR + K  
Sbjct:    20 SGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRRMKLKKM 79

Query:   116 QLERDYGVLKAN 127
               E     L AN
Sbjct:    80 SRENRIRELTAN 91


>UNIPROTKB|Q02814 [details] [associations]
            symbol:CHOX-CAD2 "Homeobox protein CHOX-CAD2" species:9031
            "Gallus gallus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG291290 OrthoDB:EOG42FSK7
            EMBL:L06621 IPI:IPI00576916 PIR:PC1228 ProteinModelPortal:Q02814
            SMR:Q02814 InParanoid:Q02814 Uniprot:Q02814
        Length = 60

 Score = 103 (41.3 bits), Expect = 3.8e-05, P = 3.8e-05
 Identities = 25/54 (46%), Positives = 30/54 (55%)

Query:    59 EKKRRLSVDQVKA-LEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRAR 111
             EK R +  D  +  LEK F     +   RK +LA  LGL  RQV  WFQNRRA+
Sbjct:     2 EKYRVVYTDHQRLELEKEFHCNRYITIRRKSELAVNLGLSERQVKSWFQNRRAK 55


>RGD|1564874 [details] [associations]
            symbol:Nkx1-1 "NK1 transcription factor related, locus 1
            (Drosophila)" species:10116 "Rattus norvegicus" [GO:0000976
            "transcription regulatory region sequence-specific DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0043467 "regulation of generation of precursor
            metabolites and energy" evidence=IEA;ISO] [GO:0050877 "neurological
            system process" evidence=IEA;ISO] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 RGD:1564874 GO:GO:0005634 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0000976 GO:GO:0050877 GeneTree:ENSGT00660000095141
            GO:GO:0043467 IPI:IPI00766731 ProteinModelPortal:F1M5E3 SMR:F1M5E3
            Ensembl:ENSRNOT00000057911 Uniprot:F1M5E3
        Length = 60

 Score = 103 (41.3 bits), Expect = 3.8e-05, P = 3.8e-05
 Identities = 22/50 (44%), Positives = 29/50 (58%)

Query:    67 DQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQ 116
             +Q+ ALE  F+    L    ++ LA  L L   QV +WFQNRR +WK KQ
Sbjct:    11 EQLVALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWK-KQ 59


>UNIPROTKB|Q00444 [details] [associations]
            symbol:HOXC5 "Homeobox protein Hox-C5" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0048706 "embryonic skeletal system
            development" evidence=IEA] [GO:0006357 "regulation of transcription
            from RNA polymerase II promoter" evidence=TAS] [GO:0005634
            "nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
            [GO:0030054 "cell junction" evidence=IDA] InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0009952 GO:GO:0030054 GO:GO:0043565 GO:GO:0003700
            GO:GO:0006357 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048706 HOVERGEN:HBG016849
            HOGENOM:HOG000231178 KO:K09305 UniGene:Hs.549040 EMBL:X61755
            IPI:IPI00022893 PIR:S20029 RefSeq:NP_061826.1
            ProteinModelPortal:Q00444 SMR:Q00444 STRING:Q00444
            PhosphoSite:Q00444 DMDM:232262 PRIDE:Q00444 DNASU:3222
            Ensembl:ENST00000312492 GeneID:3222 KEGG:hsa:3222 UCSC:uc001sew.3
            CTD:3222 GeneCards:GC12P054379 HGNC:HGNC:5127 HPA:HPA026794
            MIM:142973 neXtProt:NX_Q00444 PharmGKB:PA29402 eggNOG:NOG286013
            InParanoid:Q00444 OMA:CYSGLDL OrthoDB:EOG4CRM16 PhylomeDB:Q00444
            GenomeRNAi:3222 NextBio:12820 Bgee:Q00444 Genevestigator:Q00444
            GermOnline:ENSG00000172789 Uniprot:Q00444
        Length = 222

 Score = 114 (45.2 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
 Identities = 25/61 (40%), Positives = 34/61 (55%)

Query:    56 HVSEKKR-RLSVD--QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARW 112
             H ++ KR R S    Q   LEK F     L   R++++A  L L  RQ+ +WFQNRR +W
Sbjct:   151 HETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKW 210

Query:   113 K 113
             K
Sbjct:   211 K 211

 Score = 39 (18.8 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
 Identities = 9/26 (34%), Positives = 13/26 (50%)

Query:    11 SLGALMSICPATDEQSPRNNQVYSRE 36
             S  A     P  DE +P N  +YS++
Sbjct:    77 SAAAAPGHAPGRDEAAPLNPGMYSQK 102


>UNIPROTKB|F1NDR5 [details] [associations]
            symbol:HMX1 "Homeobox protein HMX1" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 IPI:IPI00596089
            GeneTree:ENSGT00700000104333 EMBL:AADN02014984
            Ensembl:ENSGALT00000025153 Uniprot:F1NDR5
        Length = 298

 Score = 122 (48.0 bits), Expect = 3.9e-05, P = 3.9e-05
 Identities = 32/87 (36%), Positives = 44/87 (50%)

Query:    59 EKKRR--LSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQ 116
             +KK R   S  QV  LE  F+V+  L    +  LA  L L   QV +WFQNRR +WK +Q
Sbjct:   166 KKKTRTVFSRSQVFQLESTFDVKRYLSSSERAGLAASLHLTETQVKIWFQNRRNKWK-RQ 224

Query:   117 LERDYGVLKANYDALKL-NYDSLQHDN 142
             L  D      ++ A ++     L H+N
Sbjct:   225 LAADLEAANLSHAAQRIVRVPILYHEN 251


>UNIPROTKB|Q17QR5 [details] [associations]
            symbol:DBX2 "Homeobox protein DBX2" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
            eggNOG:NOG270330 GeneTree:ENSGT00700000104097 HOGENOM:HOG000112172
            EMBL:BC118220 IPI:IPI00717015 RefSeq:NP_001068929.1
            UniGene:Bt.40769 ProteinModelPortal:Q17QR5 SMR:Q17QR5 PRIDE:Q17QR5
            Ensembl:ENSBTAT00000008720 GeneID:510669 KEGG:bta:510669 CTD:440097
            HOVERGEN:HBG104467 InParanoid:Q17QR5 OMA:GTRWAFQ OrthoDB:EOG4MPHQG
            NextBio:20869558 Uniprot:Q17QR5
        Length = 340

 Score = 123 (48.4 bits), Expect = 4.0e-05, P = 4.0e-05
 Identities = 26/55 (47%), Positives = 36/55 (65%)

Query:    65 SVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK-TKQLE 118
             S DQ KALEK F+ +  +    + KLA  LGL+  QV +WFQNRR +W+ +K+ E
Sbjct:   193 SEDQRKALEKMFQKQKYISKTDRKKLAINLGLKESQVKIWFQNRRMKWRNSKEKE 247


>ZFIN|ZDB-GENE-070810-7 [details] [associations]
            symbol:nkx6.3 "NK6 homeobox 3" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0000976 "transcription
            regulatory region sequence-specific DNA binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            ZFIN:ZDB-GENE-070810-7 GO:GO:0005634 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0000976 GeneTree:ENSGT00680000099625 EMBL:BX571947
            IPI:IPI00996504 Ensembl:ENSDART00000125516 Bgee:F1R8I3
            Uniprot:F1R8I3
        Length = 273

 Score = 121 (47.7 bits), Expect = 4.1e-05, P = 4.1e-05
 Identities = 25/60 (41%), Positives = 33/60 (55%)

Query:    56 HVSEKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTK 115
             +V   +   S  Q+ ALEK FE    L    + +LA  LG+   QV VWFQNRR +W+ K
Sbjct:   151 NVQHTRPTFSGHQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKK 210


>UNIPROTKB|F8VVX3 [details] [associations]
            symbol:HLX "H2.0-like homeobox protein" species:9606 "Homo
            sapiens" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0000976 EMBL:AL445423 HGNC:HGNC:4978 IPI:IPI00643042
            ProteinModelPortal:F8VVX3 SMR:F8VVX3 Ensembl:ENST00000549319
            OMA:ESTQAPL ArrayExpress:F8VVX3 Bgee:F8VVX3 Uniprot:F8VVX3
        Length = 274

 Score = 121 (47.7 bits), Expect = 4.2e-05, P = 4.2e-05
 Identities = 28/57 (49%), Positives = 37/57 (64%)

Query:    68 QVKALEKNFEVENKL-EPERKVKLAQELGLQPRQVAVWFQNRRARW---KTKQLERD 120
             Q K LEK FE++  + +P+RK +LA  LGL   QV VWFQNRR +W   K  Q ++D
Sbjct:    73 QRKGLEKRFEIQKYVTKPDRK-QLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQKD 128


>UNIPROTKB|F1NKM9 [details] [associations]
            symbol:CNOT2 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GeneTree:ENSGT00680000099625 EMBL:AADN02049009
            EMBL:AADN02049010 IPI:IPI00592679 Ensembl:ENSGALT00000037090
            Uniprot:F1NKM9
        Length = 151

 Score = 108 (43.1 bits), Expect = 4.2e-05, P = 4.2e-05
 Identities = 23/58 (39%), Positives = 31/58 (53%)

Query:    67 DQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVL 124
             DQ+  LEK F  +  +    +  LA  L L   QV VWFQNRR +W+ + LE+    L
Sbjct:    84 DQLARLEKEFARQQYMVGTERCLLASALHLTEEQVKVWFQNRRIKWRKQSLEQQQAKL 141


>UNIPROTKB|F1NNJ9 [details] [associations]
            symbol:NKX6-2 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0010454 "negative regulation of cell fate
            commitment" evidence=IEA] [GO:0010455 "positive regulation of cell
            fate commitment" evidence=IEA] [GO:0021912 "regulation of
            transcription from RNA polymerase II promoter involved in spinal
            cord motor neuron fate specification" evidence=IEA] [GO:0021913
            "regulation of transcription from RNA polymerase II promoter
            involved in ventral spinal cord interneuron specification"
            evidence=IEA] [GO:0022010 "central nervous system myelination"
            evidence=IEA] [GO:0031018 "endocrine pancreas development"
            evidence=IEA] [GO:0045686 "negative regulation of glial cell
            differentiation" evidence=IEA] [GO:0045687 "positive regulation of
            glial cell differentiation" evidence=IEA] [GO:0050885
            "neuromuscular process controlling balance" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0030154
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0000976
            GeneTree:ENSGT00680000099625 GO:GO:0010455 GO:GO:0010454 CTD:84504
            KO:K09350 OMA:GPAGFKA EMBL:AADN02047157 EMBL:AADN02047158
            IPI:IPI00604205 RefSeq:NP_001186477.1 UniGene:Gga.2725
            Ensembl:ENSGALT00000017097 GeneID:395591 KEGG:gga:395591
            NextBio:20815664 Uniprot:F1NNJ9
        Length = 278

 Score = 121 (47.7 bits), Expect = 4.3e-05, P = 4.3e-05
 Identities = 31/87 (35%), Positives = 44/87 (50%)

Query:    65 SVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVL 124
             S  Q+ ALEK FE    L    + +LA  LG+   QV VWFQNRR +W+ K+   +    
Sbjct:   159 SGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWR-KRHAAEMASA 217

Query:   125 KANYDAL--KLNYDSLQHDNEALLKEI 149
             K  +D+   KL   S   D++   K +
Sbjct:   218 KKKHDSETEKLKESSDNEDDDEYNKPL 244


>ZFIN|ZDB-GENE-030131-5304 [details] [associations]
            symbol:hlx1 "H2.0-like homeo box 1 (Drosophila)"
            species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0000976 "transcription
            regulatory region sequence-specific DNA binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 ZFIN:ZDB-GENE-030131-5304 GO:GO:0005634 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0000976 GeneTree:ENSGT00700000104097 eggNOG:NOG331357
            HOGENOM:HOG000112911 HOVERGEN:HBG000457 OrthoDB:EOG473PRM
            EMBL:CU633978 IPI:IPI00510547 Ensembl:ENSDART00000131806
            OMA:CIADILQ Uniprot:B8JMG3
        Length = 356

 Score = 123 (48.4 bits), Expect = 4.4e-05, P = 4.4e-05
 Identities = 34/110 (30%), Positives = 58/110 (52%)

Query:    68 QVKALEKNFEVENKL-EPERKVKLAQELGLQPRQVAVWFQNRRARWK-TKQLERDYGVLK 125
             Q K LEK FE++  + +P+RK +LA  LGL   QV VWFQNRR +W+ +K+ +      K
Sbjct:   219 QRKGLEKRFEIQKYVTKPDRK-QLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQKDKEK 277

Query:   126 ANYDALKLNYDSLQHDNEALLKEIRELKSKLN-EENTESNISVKQEETIV 174
                D      +  + D+     E  E + +   E+ ++ +IS   + +++
Sbjct:   278 EQPDKSAAETEQKERDDSECETEPSESEFEDGPEDKSDVDISDLNKASVI 327


>UNIPROTKB|Q6RFL5 [details] [associations]
            symbol:BSX "Brain-specific homeobox protein homolog"
            species:9031 "Gallus gallus" [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0007420 "brain development"
            evidence=ISS] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005667
            "transcription factor complex" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0007626 "locomotory behavior"
            evidence=IEA] [GO:0042755 "eating behavior" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0060056 "mammary gland
            involution" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005737 GO:GO:0007420 GO:GO:0043565
            GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
            GeneTree:ENSGT00700000104097 HOGENOM:HOG000231924 EMBL:AY500594
            IPI:IPI00581246 RefSeq:NP_989843.1 UniGene:Gga.9478
            ProteinModelPortal:Q6RFL5 SMR:Q6RFL5 Ensembl:ENSGALT00000010527
            GeneID:395183 KEGG:gga:395183 CTD:390259 eggNOG:NOG242366
            HOVERGEN:HBG050738 InParanoid:Q6RFL5 OMA:LHKPEHH OrthoDB:EOG4KKZ41
            NextBio:20815273 Uniprot:Q6RFL5
        Length = 233

 Score = 119 (46.9 bits), Expect = 4.5e-05, P = 4.5e-05
 Identities = 28/66 (42%), Positives = 36/66 (54%)

Query:    56 HVSEKKRR--LSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 113
             H   +K R   S  Q+  LEK FE++  L    +V+LA  L L   QV  WFQNRR + K
Sbjct:   109 HCRRRKARTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHK 168

Query:   114 TKQLER 119
              KQL +
Sbjct:   169 -KQLRK 173


>FB|FBgn0261723 [details] [associations]
            symbol:Dbx "Dbx" species:7227 "Drosophila melanogaster"
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=ISS] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0005634 "nucleus"
            evidence=ISS] [GO:0007399 "nervous system development"
            evidence=IMP] [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0048663 "neuron
            fate commitment" evidence=IMP] [GO:0007411 "axon guidance"
            evidence=IMP] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0007411 EMBL:AE014296 GO:GO:0003700 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GO:GO:0000976 GO:GO:0048663
            GeneTree:ENSGT00700000104097 eggNOG:NOG257690 RefSeq:NP_647677.2
            UniGene:Dm.23633 ProteinModelPortal:Q9W064 SMR:Q9W064
            MINT:MINT-921726 EnsemblMetazoa:FBtr0290136 GeneID:38254
            KEGG:dme:Dmel_CG42234 UCSC:CG42234-RC CTD:38254 FlyBase:FBgn0261723
            InParanoid:Q9W064 OMA:HPAFLTH OrthoDB:EOG4N02X7 PhylomeDB:Q9W064
            GenomeRNAi:38254 NextBio:807751 ArrayExpress:Q9W064 Bgee:Q9W064
            Uniprot:Q9W064
        Length = 741

 Score = 127 (49.8 bits), Expect = 4.7e-05, P = 4.7e-05
 Identities = 27/57 (47%), Positives = 39/57 (68%)

Query:    65 SVDQVKALEKNFEVENKL-EPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERD 120
             S  Q K LEK F+ +  + +P+RK KLA+ LGL+  QV +WFQNRR +W+  + ER+
Sbjct:   442 SDSQRKGLEKRFQQQKYISKPDRK-KLAERLGLKDSQVKIWFQNRRMKWRNSK-ERE 496


>UNIPROTKB|F1NZL9 [details] [associations]
            symbol:LOC100857765 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0000976 GeneTree:ENSGT00660000095141 OMA:RRIRMRR
            EMBL:AADN02056979 EMBL:AADN02056980 IPI:IPI00821562
            Ensembl:ENSGALT00000038656 Uniprot:F1NZL9
        Length = 78

 Score = 102 (41.0 bits), Expect = 4.8e-05, P = 4.8e-05
 Identities = 22/50 (44%), Positives = 28/50 (56%)

Query:    67 DQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQ 116
             +Q+ ALE  F     L    ++ LA  L L   QV +WFQNRR +WK KQ
Sbjct:    25 EQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWK-KQ 73


>UNIPROTKB|Q90789 [details] [associations]
            symbol:Cnot "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0009880 "embryonic pattern specification" evidence=IEA]
            [GO:0009953 "dorsal/ventral pattern formation" evidence=IEA]
            [GO:0030903 "notochord development" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00680000099625 HOVERGEN:HBG016849 OrthoDB:EOG48GW4Q
            HSSP:P14653 eggNOG:NOG249605 EMBL:AADN02049007 EMBL:X82575
            IPI:IPI00679844 PIR:I50622 UniGene:Gga.677
            Ensembl:ENSGALT00000037091 HOGENOM:HOG000202447 InParanoid:Q90789
            Uniprot:Q90789
        Length = 111

 Score = 102 (41.0 bits), Expect = 4.8e-05, P = 4.8e-05
 Identities = 20/53 (37%), Positives = 32/53 (60%)

Query:    67 DQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLER 119
             +Q++ LE+ F  +  +    +V LA  L L   QV VWFQNRR +W+ + +E+
Sbjct:    26 EQLERLEQEFLKQQYMVGTERVDLAATLRLTETQVKVWFQNRRIKWRKQSMEQ 78


>UNIPROTKB|G3V567 [details] [associations]
            symbol:PAX6 "Paired box protein Pax-6" species:9606 "Homo
            sapiens" [GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0000979
            "RNA polymerase II core promoter sequence-specific DNA binding"
            evidence=IEA] [GO:0000981 "sequence-specific DNA binding RNA
            polymerase II transcription factor activity" evidence=IEA]
            [GO:0001709 "cell fate determination" evidence=IEA] [GO:0001764
            "neuron migration" evidence=IEA] [GO:0002052 "positive regulation
            of neuroblast proliferation" evidence=IEA] [GO:0002088 "lens
            development in camera-type eye" evidence=IEA] [GO:0003322
            "pancreatic A cell development" evidence=IEA] [GO:0003680 "AT DNA
            binding" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
            evidence=IEA] [GO:0007224 "smoothened signaling pathway"
            evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0007435
            "salivary gland morphogenesis" evidence=IEA] [GO:0008134
            "transcription factor binding" evidence=IEA] [GO:0009950
            "dorsal/ventral axis specification" evidence=IEA] [GO:0019901
            "protein kinase binding" evidence=IEA] [GO:0021778 "oligodendrocyte
            cell fate specification" evidence=IEA] [GO:0021796 "cerebral cortex
            regionalization" evidence=IEA] [GO:0021797 "forebrain
            anterior/posterior pattern specification" evidence=IEA] [GO:0021798
            "forebrain dorsal/ventral pattern formation" evidence=IEA]
            [GO:0021902 "commitment of neuronal cell to specific neuron type in
            forebrain" evidence=IEA] [GO:0021905 "forebrain-midbrain boundary
            formation" evidence=IEA] [GO:0021912 "regulation of transcription
            from RNA polymerase II promoter involved in spinal cord motor
            neuron fate specification" evidence=IEA] [GO:0021913 "regulation of
            transcription from RNA polymerase II promoter involved in ventral
            spinal cord interneuron specification" evidence=IEA] [GO:0021918
            "regulation of transcription from RNA polymerase II promoter
            involved in somatic motor neuron fate commitment" evidence=IEA]
            [GO:0021983 "pituitary gland development" evidence=IEA] [GO:0023019
            "signal transduction involved in regulation of gene expression"
            evidence=IEA] [GO:0030216 "keratinocyte differentiation"
            evidence=IEA] [GO:0030334 "regulation of cell migration"
            evidence=IEA] [GO:0030858 "positive regulation of epithelial cell
            differentiation" evidence=IEA] [GO:0030902 "hindbrain development"
            evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
            evidence=IEA] [GO:0032808 "lacrimal gland development"
            evidence=IEA] [GO:0033365 "protein localization to organelle"
            evidence=IEA] [GO:0035035 "histone acetyltransferase binding"
            evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
            evidence=IEA] [GO:0042660 "positive regulation of cell fate
            specification" evidence=IEA] [GO:0045665 "negative regulation of
            neuron differentiation" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0048505 "regulation of timing of cell
            differentiation" evidence=IEA] [GO:0048596 "embryonic camera-type
            eye morphogenesis" evidence=IEA] [GO:0048708 "astrocyte
            differentiation" evidence=IEA] [GO:0050680 "negative regulation of
            epithelial cell proliferation" evidence=IEA] [GO:0070410 "co-SMAD
            binding" evidence=IEA] [GO:0070412 "R-SMAD binding" evidence=IEA]
            [GO:0071837 "HMG box domain binding" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0007411 GO:GO:0001764 GO:GO:0030216 GO:GO:0007435
            GO:GO:0045944 GO:GO:0045665 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GO:GO:0030334 GO:GO:0000790 GO:GO:0006366 GO:GO:0000981
            GO:GO:0033365 GO:GO:0021983 GO:GO:0050680 GO:GO:0000979
            GO:GO:0030858 GO:GO:0007224 GO:GO:0001709 GO:GO:0002052
            GO:GO:0009950 GO:GO:0021797 GO:GO:0048596 GO:GO:0023019
            GO:GO:0002088 GO:GO:0042462 EMBL:Z83307 GO:GO:0021796 GO:GO:0021913
            GO:GO:0032808 GO:GO:0021798 GO:GO:0048505 GO:GO:0021905
            GO:GO:0048708 GO:GO:0021912 GO:GO:0021902 GO:GO:0021778
            GO:GO:0003322 GO:GO:0021918 EMBL:Z95332 HGNC:HGNC:8620
            ProteinModelPortal:G3V567 SMR:G3V567 Ensembl:ENST00000530373
            ArrayExpress:G3V567 Bgee:G3V567 Uniprot:G3V567
        Length = 128

 Score = 102 (41.0 bits), Expect = 4.8e-05, P = 4.8e-05
 Identities = 19/54 (35%), Positives = 35/54 (64%)

Query:    67 DQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERD 120
             +Q++ALEK FE  +  +   + +LA ++ L   ++ VWF NRRA+W+ ++  R+
Sbjct:    19 EQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRN 72


>UNIPROTKB|F1NDR4 [details] [associations]
            symbol:HMX1 "Homeobox protein HMX1" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104333 EMBL:AADN02014984 IPI:IPI00574330
            Ensembl:ENSGALT00000025154 Uniprot:F1NDR4
        Length = 330

 Score = 122 (48.0 bits), Expect = 4.9e-05, P = 4.9e-05
 Identities = 32/87 (36%), Positives = 44/87 (50%)

Query:    59 EKKRR--LSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQ 116
             +KK R   S  QV  LE  F+V+  L    +  LA  L L   QV +WFQNRR +WK +Q
Sbjct:   165 KKKTRTVFSRSQVFQLESTFDVKRYLSSSERAGLAASLHLTETQVKIWFQNRRNKWK-RQ 223

Query:   117 LERDYGVLKANYDALKL-NYDSLQHDN 142
             L  D      ++ A ++     L H+N
Sbjct:   224 LAADLEAANLSHAAQRIVRVPILYHEN 250


>UNIPROTKB|Q9DE09 [details] [associations]
            symbol:HMX1 "Homeobox protein HMX1" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IMP] [GO:0045892
            "negative regulation of transcription, DNA-dependent" evidence=IMP]
            [GO:0005634 "nucleus" evidence=IC] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0045892 GO:GO:0003677 GO:GO:0043565 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 EMBL:AF227921 IPI:IPI00596089 RefSeq:NP_990864.1
            UniGene:Gga.14432 HSSP:P13297 ProteinModelPortal:Q9DE09
            GeneID:396546 KEGG:gga:396546 CTD:3166 eggNOG:NOG241326
            HOGENOM:HOG000231923 HOVERGEN:HBG031610 KO:K09349 OrthoDB:EOG434W7H
            NextBio:20816582 Uniprot:Q9DE09
        Length = 333

 Score = 122 (48.0 bits), Expect = 5.0e-05, P = 5.0e-05
 Identities = 32/87 (36%), Positives = 44/87 (50%)

Query:    59 EKKRR--LSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQ 116
             +KK R   S  QV  LE  F+V+  L    +  LA  L L   QV +WFQNRR +WK +Q
Sbjct:   201 KKKTRTVFSRSQVFQLESTFDVKRYLSSSERAGLAASLHLTETQVKIWFQNRRNKWK-RQ 259

Query:   117 LERDYGVLKANYDALKL-NYDSLQHDN 142
             L  D      ++ A ++     L H+N
Sbjct:   260 LAADLEAANLSHAAQRIVRVPILYHEN 286


>ZFIN|ZDB-GENE-040724-40 [details] [associations]
            symbol:lbx1a "ladybird homeobox 1a" species:7955
            "Danio rerio" [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000976
            "transcription regulatory region sequence-specific DNA binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            ZFIN:ZDB-GENE-040724-40 GO:GO:0005634 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG240187
            GeneTree:ENSGT00700000104206 HOGENOM:HOG000007247
            HOVERGEN:HBG006244 KO:K09353 OrthoDB:EOG4TTGJP EMBL:BX950184
            EMBL:AL928816 IPI:IPI00513398 RefSeq:NP_001020703.1
            UniGene:Dr.135691 Ensembl:ENSDART00000045351 GeneID:564103
            KEGG:dre:564103 CTD:564103 InParanoid:Q6ZM39 OMA:DHTTSKE
            NextBio:20885231 Uniprot:Q6ZM39
        Length = 269

 Score = 120 (47.3 bits), Expect = 5.3e-05, P = 5.3e-05
 Identities = 41/128 (32%), Positives = 64/128 (50%)

Query:    60 KKRRLSVD-----QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKT 114
             KKRR S       Q+  LEK F  +  L P  + ++AQ+LGL   QV  WFQNRRA+   
Sbjct:   123 KKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAK--- 179

Query:   115 KQLERDYGVLKANYDALKLNYDSLQHDNEALLKEIRELKSKLNEENTESNISVKQEETIV 174
               L+RD   +KA+ ++ K    ++  +  A   ++ +L+ ++N   T  + S        
Sbjct:   180 --LKRDLEEMKADVESAKA-VGNVPFEKMA---KLADLEKRVN--GTLGDSSAVSPSRSN 231

Query:   175 HETDHQNK 182
             HE +  NK
Sbjct:   232 HEHEGTNK 239


>UNIPROTKB|J9NYL4 [details] [associations]
            symbol:LBX1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GO:GO:0000976 GeneTree:ENSGT00700000104206
            CTD:10660 KO:K09353 OMA:NSEATAG EMBL:AAEX03015474
            RefSeq:XP_543979.1 Ensembl:ENSCAFT00000047871 GeneID:486850
            KEGG:cfa:486850 Uniprot:J9NYL4
        Length = 281

 Score = 120 (47.3 bits), Expect = 5.9e-05, P = 5.9e-05
 Identities = 37/91 (40%), Positives = 49/91 (53%)

Query:    60 KKRRLSVD-----QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKT 114
             KKRR S       Q+  LEK F  +  L P  + ++AQ+LGL   QV  WFQNRRA+   
Sbjct:   123 KKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAK--- 179

Query:   115 KQLERDYGVLKANYDALKLNYDSLQHDNEAL 145
               L+RD   +KA+ ++ K    S Q D  AL
Sbjct:   180 --LKRDLEEMKADVESAKKLGPSGQMDIVAL 208


>UNIPROTKB|P52954 [details] [associations]
            symbol:LBX1 "Transcription factor LBX1" species:9606 "Homo
            sapiens" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0007517 "muscle
            organ development" evidence=IEA] [GO:0001947 "heart looping"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005667
            "transcription factor complex" evidence=IEA] [GO:0008285 "negative
            regulation of cell proliferation" evidence=IEA] [GO:0021920
            "regulation of transcription from RNA polymerase II promoter
            involved in spinal cord association neuron specification"
            evidence=IEA] [GO:0045665 "negative regulation of neuron
            differentiation" evidence=IEA] [GO:0048664 "neuron fate
            determination" evidence=IEA] [GO:0009653 "anatomical structure
            morphogenesis" evidence=TAS] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0008285
            EMBL:CH471066 GO:GO:0045665 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0007517
            GO:GO:0001947 GO:GO:0009653 GO:GO:0000976 eggNOG:NOG240187
            GO:GO:0048664 EMBL:X90828 EMBL:AL135794 EMBL:BC069156 EMBL:BC136321
            IPI:IPI00006058 RefSeq:NP_006553.2 UniGene:Hs.37128
            ProteinModelPortal:P52954 SMR:P52954 STRING:P52954 DMDM:117949813
            PRIDE:P52954 Ensembl:ENST00000370193 GeneID:10660 KEGG:hsa:10660
            UCSC:uc001ksx.3 CTD:10660 GeneCards:GC10M102976 HGNC:HGNC:16960
            HPA:HPA002086 MIM:604255 neXtProt:NX_P52954 PharmGKB:PA142671561
            HOGENOM:HOG000007247 HOVERGEN:HBG006244 InParanoid:P52954 KO:K09353
            OMA:NSEATAG OrthoDB:EOG4TTGJP GenomeRNAi:10660 NextBio:40539
            ArrayExpress:P52954 Bgee:P52954 CleanEx:HS_LBX1
            Genevestigator:P52954 GermOnline:ENSG00000138136 GO:GO:0021920
            Uniprot:P52954
        Length = 281

 Score = 120 (47.3 bits), Expect = 5.9e-05, P = 5.9e-05
 Identities = 37/91 (40%), Positives = 49/91 (53%)

Query:    60 KKRRLSVD-----QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKT 114
             KKRR S       Q+  LEK F  +  L P  + ++AQ+LGL   QV  WFQNRRA+   
Sbjct:   123 KKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAK--- 179

Query:   115 KQLERDYGVLKANYDALKLNYDSLQHDNEAL 145
               L+RD   +KA+ ++ K    S Q D  AL
Sbjct:   180 --LKRDLEEMKADVESAKKLGPSGQMDIVAL 208


>UNIPROTKB|D7R811 [details] [associations]
            symbol:LBX1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GO:GO:0000976 GeneTree:ENSGT00700000104206
            CTD:10660 KO:K09353 OMA:NSEATAG OrthoDB:EOG4TTGJP EMBL:CU469143
            EMBL:HM044216 RefSeq:NP_001193265.1 UniGene:Ssc.101871
            Ensembl:ENSSSCT00000031910 GeneID:100155030 KEGG:ssc:100155030
            Uniprot:D7R811
        Length = 281

 Score = 120 (47.3 bits), Expect = 5.9e-05, P = 5.9e-05
 Identities = 37/91 (40%), Positives = 49/91 (53%)

Query:    60 KKRRLSVD-----QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKT 114
             KKRR S       Q+  LEK F  +  L P  + ++AQ+LGL   QV  WFQNRRA+   
Sbjct:   123 KKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAK--- 179

Query:   115 KQLERDYGVLKANYDALKLNYDSLQHDNEAL 145
               L+RD   +KA+ ++ K    S Q D  AL
Sbjct:   180 --LKRDLEEMKADVESAKKLGPSGQMDIVAL 208


>RGD|2321880 [details] [associations]
            symbol:LOC100360577 "homeobox A4-like" species:10116 "Rattus
            norvegicus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 RGD:2321880 GO:GO:0007275
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104090 EMBL:AC122669 IPI:IPI00778476
            Ensembl:ENSRNOT00000058985 ArrayExpress:E9PTN3 Uniprot:E9PTN3
        Length = 189

 Score = 115 (45.5 bits), Expect = 5.9e-05, P = 5.9e-05
 Identities = 22/46 (47%), Positives = 28/46 (60%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 113
             QV  LEK F     L   R++++A  L L  RQV +WFQNRR +WK
Sbjct:    95 QVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWK 140


>UNIPROTKB|E1BC20 [details] [associations]
            symbol:LBX1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0048664 "neuron fate determination" evidence=IEA]
            [GO:0045665 "negative regulation of neuron differentiation"
            evidence=IEA] [GO:0021920 "regulation of transcription from RNA
            polymerase II promoter involved in spinal cord association neuron
            specification" evidence=IEA] [GO:0008285 "negative regulation of
            cell proliferation" evidence=IEA] [GO:0005667 "transcription factor
            complex" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0001947 "heart
            looping" evidence=IEA] [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0008285 GO:GO:0045665 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0001947
            GO:GO:0000976 GeneTree:ENSGT00700000104206 GO:GO:0048664 CTD:10660
            KO:K09353 OMA:NSEATAG GO:GO:0021920 EMBL:DAAA02058980
            IPI:IPI00685675 RefSeq:NP_001179743.1 UniGene:Bt.54498
            Ensembl:ENSBTAT00000032902 GeneID:534470 KEGG:bta:534470
            NextBio:20876409 Uniprot:E1BC20
        Length = 282

 Score = 120 (47.3 bits), Expect = 5.9e-05, P = 5.9e-05
 Identities = 37/91 (40%), Positives = 49/91 (53%)

Query:    60 KKRRLSVD-----QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKT 114
             KKRR S       Q+  LEK F  +  L P  + ++AQ+LGL   QV  WFQNRRA+   
Sbjct:   123 KKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAK--- 179

Query:   115 KQLERDYGVLKANYDALKLNYDSLQHDNEAL 145
               L+RD   +KA+ ++ K    S Q D  AL
Sbjct:   180 --LKRDLEEMKADVESAKKLGPSGQMDIVAL 208


>MGI|MGI:104867 [details] [associations]
            symbol:Lbx1 "ladybird homeobox homolog 1 (Drosophila)"
            species:10090 "Mus musculus" [GO:0000976 "transcription regulatory
            region sequence-specific DNA binding" evidence=IEA] [GO:0001947
            "heart looping" evidence=IMP] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IDA] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005667 "transcription factor complex" evidence=IDA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IDA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0007399 "nervous system development"
            evidence=IEA] [GO:0007517 "muscle organ development" evidence=IEA]
            [GO:0008285 "negative regulation of cell proliferation"
            evidence=IMP] [GO:0021920 "regulation of transcription from RNA
            polymerase II promoter involved in spinal cord association neuron
            specification" evidence=IMP] [GO:0030154 "cell differentiation"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0045665 "negative regulation of neuron
            differentiation" evidence=IMP] [GO:0048663 "neuron fate commitment"
            evidence=IMP] [GO:0048664 "neuron fate determination"
            evidence=IGI;IMP] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 MGI:MGI:104867
            GO:GO:0008285 GO:GO:0045665 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0007517
            GO:GO:0001947 GO:GO:0000976 eggNOG:NOG240187
            GeneTree:ENSGT00700000104206 GO:GO:0048664 CTD:10660
            HOGENOM:HOG000007247 HOVERGEN:HBG006244 KO:K09353 OMA:NSEATAG
            OrthoDB:EOG4TTGJP GO:GO:0021920 EMBL:X90829 EMBL:AB108497
            EMBL:BC119177 EMBL:BC120586 EMBL:AK144562 IPI:IPI00132589
            RefSeq:NP_034821.2 UniGene:Mm.116815 ProteinModelPortal:P52955
            SMR:P52955 IntAct:P52955 STRING:P52955 PRIDE:P52955
            Ensembl:ENSMUST00000099401 GeneID:16814 KEGG:mmu:16814
            UCSC:uc008hqv.1 InParanoid:P52955 NextBio:290692 Bgee:P52955
            CleanEx:MM_LBX1 Genevestigator:P52955 GermOnline:ENSMUSG00000025216
            Uniprot:P52955
        Length = 282

 Score = 120 (47.3 bits), Expect = 5.9e-05, P = 5.9e-05
 Identities = 37/91 (40%), Positives = 49/91 (53%)

Query:    60 KKRRLSVD-----QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKT 114
             KKRR S       Q+  LEK F  +  L P  + ++AQ+LGL   QV  WFQNRRA+   
Sbjct:   123 KKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAK--- 179

Query:   115 KQLERDYGVLKANYDALKLNYDSLQHDNEAL 145
               L+RD   +KA+ ++ K    S Q D  AL
Sbjct:   180 --LKRDLEEMKADVESAKKLGPSGQMDIVAL 208


>RGD|1564197 [details] [associations]
            symbol:Lbx1 "ladybird homeobox 1" species:10116 "Rattus
            norvegicus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0001947 "heart
            looping" evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA;ISO]
            [GO:0005667 "transcription factor complex" evidence=IEA;ISO]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=ISO] [GO:0007517 "muscle organ development" evidence=IEA]
            [GO:0008285 "negative regulation of cell proliferation"
            evidence=IEA;ISO] [GO:0021920 "regulation of transcription from RNA
            polymerase II promoter involved in spinal cord association neuron
            specification" evidence=IEA;ISO] [GO:0045665 "negative regulation
            of neuron differentiation" evidence=IEA;ISO] [GO:0048663 "neuron
            fate commitment" evidence=ISO] [GO:0048664 "neuron fate
            determination" evidence=IEA;ISO] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 RGD:1564197 GO:GO:0008285 GO:GO:0045665 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
            GO:GO:0007517 GO:GO:0001947 GO:GO:0000976 eggNOG:NOG240187
            GeneTree:ENSGT00700000104206 GO:GO:0048664 CTD:10660
            HOGENOM:HOG000007247 HOVERGEN:HBG006244 KO:K09353 OrthoDB:EOG4TTGJP
            GO:GO:0021920 EMBL:AB197923 IPI:IPI00392001 RefSeq:NP_001040573.1
            UniGene:Rn.194904 ProteinModelPortal:Q1XID0 PRIDE:Q1XID0
            Ensembl:ENSRNOT00000021748 GeneID:499362 KEGG:rno:499362
            NextBio:702666 Genevestigator:Q1XID0 Uniprot:Q1XID0
        Length = 285

 Score = 120 (47.3 bits), Expect = 6.1e-05, P = 6.1e-05
 Identities = 37/91 (40%), Positives = 49/91 (53%)

Query:    60 KKRRLSVD-----QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKT 114
             KKRR S       Q+  LEK F  +  L P  + ++AQ+LGL   QV  WFQNRRA+   
Sbjct:   123 KKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAK--- 179

Query:   115 KQLERDYGVLKANYDALKLNYDSLQHDNEAL 145
               L+RD   +KA+ ++ K    S Q D  AL
Sbjct:   180 --LKRDLEEMKADVESAKKLGPSGQMDIVAL 208


>UNIPROTKB|F1NHF8 [details] [associations]
            symbol:CDX4 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00530000063388 GO:GO:0000976 EMBL:AADN02013531
            IPI:IPI00819450 Ensembl:ENSGALT00000039481 Uniprot:F1NHF8
        Length = 60

 Score = 101 (40.6 bits), Expect = 6.3e-05, P = 6.3e-05
 Identities = 24/54 (44%), Positives = 30/54 (55%)

Query:    59 EKKRRLSVDQVKA-LEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRAR 111
             EK R +  D  +  LEK F     +   RK +LA  L L  RQV +WFQNRRA+
Sbjct:     2 EKYRVVYTDHQRLELEKEFHYNRYITIRRKSELAANLRLSERQVKIWFQNRRAK 55


>UNIPROTKB|F1LRM4 [details] [associations]
            symbol:Dbx2 "Protein Dbx2" species:10116 "Rattus
            norvegicus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0000976 GeneTree:ENSGT00700000104097 CTD:440097
            IPI:IPI00387767 RefSeq:XP_001053826.1 RefSeq:XP_001058743.1
            UniGene:Rn.93216 Ensembl:ENSRNOT00000009143 GeneID:541457
            KEGG:rno:541457 RGD:1359605 NextBio:714075 Uniprot:F1LRM4
        Length = 377

 Score = 122 (48.0 bits), Expect = 6.3e-05, P = 6.3e-05
 Identities = 26/55 (47%), Positives = 36/55 (65%)

Query:    65 SVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK-TKQLE 118
             S DQ KALEK F+ +  +    + KLA  LGL+  QV +WFQNRR +W+ +K+ E
Sbjct:   234 SEDQRKALEKMFQKQKYISKTDRRKLAISLGLKESQVKIWFQNRRMKWRNSKEKE 288


>UNIPROTKB|E1C639 [details] [associations]
            symbol:Gga.30007 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104256
            EMBL:AADN02006258 IPI:IPI00598714 Ensembl:ENSGALT00000020505
            OMA:WRKHEKF Uniprot:E1C639
        Length = 160

 Score = 110 (43.8 bits), Expect = 6.3e-05, P = 6.3e-05
 Identities = 25/75 (33%), Positives = 46/75 (61%)

Query:    56 HVSEK-KRRL----SVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRA 110
             HV  K KRR+    + +Q++ LEK F+V +  +   + +LA ++ L   +V +WFQN+RA
Sbjct:    76 HVERKGKRRIRTTFTAEQLQELEKIFQVTHYPDVHIRNQLAAKINLPEARVQIWFQNQRA 135

Query:   111 RWKTKQLERDYGVLK 125
             +W+  +   ++G L+
Sbjct:   136 KWRKHEKFGNFGGLQ 150


>UNIPROTKB|F1NMY3 [details] [associations]
            symbol:HOXB8 "Homeobox protein Hox-B8" species:9031 "Gallus
            gallus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007625
            "grooming behavior" evidence=IEA] [GO:0008344 "adult locomotory
            behavior" evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0019233 "sensory perception of
            pain" evidence=IEA] [GO:0021516 "dorsal spinal cord development"
            evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
            evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0000976 GeneTree:ENSGT00700000104332
            OMA:MERAQEV EMBL:AADN02070205 EMBL:AADN02070206 EMBL:AADN02027051
            EMBL:AADN02027057 EMBL:AADN02027058 EMBL:AADN02027059
            EMBL:AADN02027047 EMBL:AADN02027048 EMBL:AADN02027049
            EMBL:AADN02027050 EMBL:AADN02027052 EMBL:AADN02027053
            EMBL:AADN02027054 EMBL:AADN02027055 EMBL:AADN02027056
            EMBL:AADN02027060 EMBL:AADN02027061 EMBL:AADN02027062
            EMBL:AADN02027063 EMBL:AADN02027064 EMBL:AADN02027065
            EMBL:AADN02027066 EMBL:AADN02027067 EMBL:AADN02027068
            EMBL:AADN02027069 EMBL:AADN02070203 EMBL:AADN02070204
            EMBL:AADN02073361 IPI:IPI00572938 Ensembl:ENSGALT00000028037
            Uniprot:F1NMY3
        Length = 240

 Score = 118 (46.6 bits), Expect = 6.7e-05, P = 6.7e-05
 Identities = 25/76 (32%), Positives = 40/76 (52%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKAN 127
             Q   LEK F     L  +R+++++  LGL  RQV +WFQNRR +WK +  +  +   K  
Sbjct:   155 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKFPSSKCE 214

Query:   128 YDALKLNYDSLQHDNE 143
              + L+   +  Q  +E
Sbjct:   215 QEELEKQMERAQEVDE 230


>UNIPROTKB|Q2PYN8 [details] [associations]
            symbol:lbx1 "Transcription factor LBX1" species:8355
            "Xenopus laevis" [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IMP] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISS] [GO:0005667 "transcription factor complex"
            evidence=ISS] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0007517 "muscle organ development"
            evidence=IMP] [GO:0051450 "myoblast proliferation" evidence=IMP]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0030154 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
            GO:GO:0000122 GO:GO:0007517 GO:GO:0000976 HSSP:P06601 GO:GO:0051450
            CTD:10660 HOVERGEN:HBG006244 KO:K09353 EMBL:DQ294722
            RefSeq:NP_001089192.1 UniGene:Xl.55973 ProteinModelPortal:Q2PYN8
            GeneID:734237 KEGG:xla:734237 Xenbase:XB-GENE-6251676
            Uniprot:Q2PYN8
        Length = 267

 Score = 119 (46.9 bits), Expect = 6.7e-05, P = 6.7e-05
 Identities = 42/110 (38%), Positives = 58/110 (52%)

Query:    60 KKRRLSVD-----QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKT 114
             KKRR S       Q+  LEK F  +  L P  + ++AQ+LGL   QV  WFQNRRA+   
Sbjct:   125 KKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAK--- 181

Query:   115 KQLERDYGVLKANYDALKLNYDSLQHDNEALLKEIRELKSKLNEE-NTES 163
               L+RD   +KA+ ++ K    S     EA+L  I EL+   +E  N+ S
Sbjct:   182 --LKRDLEEMKADVESTKKMSPSAV---EAVLT-ISELEESGSERGNSRS 225


>UNIPROTKB|H2L2F8 [details] [associations]
            symbol:ceh-27 "Protein CEH-27, isoform b" species:6239
            "Caenorhabditis elegans" [GO:0006366 "transcription from RNA
            polymerase II promoter" evidence=ISS] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009792
            GO:GO:0040007 GO:GO:0002119 GO:GO:0043565 GO:GO:0010171
            GO:GO:0000003 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0000981 GO:GO:0034243
            GeneTree:ENSGT00700000104098 EMBL:Z81085 RefSeq:NP_001256349.1
            ProteinModelPortal:H2L2F8 SMR:H2L2F8 EnsemblMetazoa:F46F3.1b
            GeneID:185853 KEGG:cel:CELE_F46F3.1 CTD:185853 WormBase:F46F3.1b
            Uniprot:H2L2F8
        Length = 170

 Score = 112 (44.5 bits), Expect = 6.9e-05, P = 6.9e-05
 Identities = 23/65 (35%), Positives = 38/65 (58%)

Query:    57 VSEKKRRL--SVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKT 114
             +S +KRR+  S  QV  LE+ F++   L    +  LA+ + L   QV +WFQN+R + K 
Sbjct:     3 ISRRKRRVLFSPQQVHVLERKFQINRYLSAADRENLAKSINLSATQVKIWFQNQRYKCKR 62

Query:   115 KQLER 119
             ++ E+
Sbjct:    63 QEKEK 67


>UNIPROTKB|H9KV25 [details] [associations]
            symbol:NOBOX "Homeobox protein NOBOX" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AC004534 HGNC:HGNC:22448
            ProteinModelPortal:H9KV25 SMR:H9KV25 Ensembl:ENST00000223140
            Bgee:H9KV25 Uniprot:H9KV25
        Length = 574

 Score = 124 (48.7 bits), Expect = 7.2e-05, P = 7.2e-05
 Identities = 22/58 (37%), Positives = 42/58 (72%)

Query:    57 VSEKKRRL-SVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 113
             + +K R L   DQ++ LEK F+ ++  + +++ ++AQ +G+ P+++ VWFQNRRA+W+
Sbjct:   186 IRKKTRTLYRSDQLEELEKIFQEDHYPDSDKRREIAQTVGVTPQRIMVWFQNRRAKWR 243


>UNIPROTKB|Q9DED6 [details] [associations]
            symbol:BARX1B "Homeobox protein BarH-like 1b" species:9031
            "Gallus gallus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0000976 UniGene:Gga.44 HOVERGEN:HBG050665
            CTD:56033 KO:K09361 EMBL:AB044371 IPI:IPI00593961
            RefSeq:NP_989524.1 ProteinModelPortal:Q9DED6 SMR:Q9DED6
            GeneID:374017 KEGG:gga:374017 NextBio:20813544 Uniprot:Q9DED6
        Length = 247

 Score = 118 (46.6 bits), Expect = 7.2e-05, P = 7.2e-05
 Identities = 33/104 (31%), Positives = 51/104 (49%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKAN 127
             Q+  LEK FE +  L    ++ LA+ LGL   QV  W+QNRR +WK   L+   G+    
Sbjct:   146 QLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWKKIVLQGG-GLESPT 204

Query:   128 YDALKLNYDSLQHDNEALLKEIRELKSKLNEENTESNISVKQEE 171
                 +   +S+   +E L ++ R   ++   E+  S   V QEE
Sbjct:   205 KPKGRPKKNSIP-SSEQLSEQERARDAEKPPESLGSPAEVSQEE 247


>UNIPROTKB|P23459 [details] [associations]
            symbol:HOXD8 "Homeobox protein Hox-D8" species:9031 "Gallus
            gallus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0000976 HOVERGEN:HBG016849 KO:K09308 EMBL:X57158
            IPI:IPI00576774 PIR:I50145 RefSeq:NP_997060.1 UniGene:Gga.3187
            ProteinModelPortal:P23459 SMR:P23459 GeneID:396301 KEGG:gga:396301
            CTD:3234 NextBio:20816351 Uniprot:P23459
        Length = 188

 Score = 114 (45.2 bits), Expect = 7.6e-05, P = 7.6e-05
 Identities = 23/53 (43%), Positives = 33/53 (62%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERD 120
             Q   LEK F     L  +R+++++  LGL  RQV +WFQNRR +WK K+  +D
Sbjct:   106 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-KENNKD 157


>UNIPROTKB|F1MD21 [details] [associations]
            symbol:HOXA2 "Homeobox protein Hox-A2" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048703 "embryonic
            viscerocranium morphogenesis" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0045665 "negative regulation of neuron
            differentiation" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0042474 "middle ear morphogenesis"
            evidence=IEA] [GO:0035284 "brain segmentation" evidence=IEA]
            [GO:0021658 "rhombomere 3 morphogenesis" evidence=IEA] [GO:0021568
            "rhombomere 2 development" evidence=IEA] [GO:0009953
            "dorsal/ventral pattern formation" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0007379
            "segment specification" evidence=IEA] [GO:0002076 "osteoblast
            development" evidence=IEA] [GO:0001709 "cell fate determination"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0045665
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0008045 GO:GO:0002076
            GO:GO:0007379 GO:GO:0009953 GO:GO:0001709 GO:GO:0035284
            GO:GO:0048703 GO:GO:0042474 GO:GO:0021568
            GeneTree:ENSGT00700000104446 IPI:IPI00689409 UniGene:Bt.111374
            OMA:NCGSGLN GO:GO:0021658 EMBL:DAAA02010939
            Ensembl:ENSBTAT00000010699 Uniprot:F1MD21
        Length = 372

 Score = 111 (44.1 bits), Expect = 7.9e-05, Sum P(2) = 7.8e-05
 Identities = 36/121 (29%), Positives = 58/121 (47%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKT----KQLERDYGV 123
             Q+  LEK F     L   R+V++A  L L  RQV VWFQNRR + K     K+ +   G 
Sbjct:   150 QLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQCKENQNSEGK 209

Query:   124 LKANYDALKLNYDSLQHDNEALLKEIRELKSKLNEENT---ESNISVKQEETIVHETDHQ 180
              K+  D+ K++ D    + ++L ++   +   L E      + N   +Q+ +  H  D Q
Sbjct:   210 FKSLEDSEKVDEDE---EEKSLFEQALSVSGALLEREGYTFQQNALSQQQASNGHNGDSQ 266

Query:   181 N 181
             +
Sbjct:   267 S 267

 Score = 49 (22.3 bits), Expect = 7.9e-05, Sum P(2) = 7.8e-05
 Identities = 9/24 (37%), Positives = 14/24 (58%)

Query:   307 MEEHNFFGDETCNFFSDEQPPSLP 330
             +++ N F  ++C   SD   PSLP
Sbjct:   318 LQDFNVFSTDSCLQLSDAVSPSLP 341


>ZFIN|ZDB-GENE-980526-533 [details] [associations]
            symbol:hoxc5a "homeo box C5a" species:7955 "Danio
            rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            ZFIN:ZDB-GENE-980526-533 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GeneTree:ENSGT00700000104161 HOVERGEN:HBG016849
            HOGENOM:HOG000231178 EMBL:BX005254 EMBL:BC163205 IPI:IPI00499962
            UniGene:Dr.132198 Ensembl:ENSDART00000103038 Uniprot:B3DIP7
        Length = 233

 Score = 117 (46.2 bits), Expect = 7.9e-05, P = 7.9e-05
 Identities = 26/61 (42%), Positives = 34/61 (55%)

Query:    56 HVSEKKR-RLSVD--QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARW 112
             H S+ KR R S    Q   LEK F     L   R++++A  L L  RQ+ +WFQNRR +W
Sbjct:   162 HESDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKW 221

Query:   113 K 113
             K
Sbjct:   222 K 222


>UNIPROTKB|E2RRG1 [details] [associations]
            symbol:NKX6-1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
            GeneTree:ENSGT00680000099625 OMA:TPLYPAY EMBL:AAEX03016734
            Ensembl:ENSCAFT00000014553 NextBio:20861334 Uniprot:E2RRG1
        Length = 288

 Score = 119 (46.9 bits), Expect = 8.1e-05, P = 8.1e-05
 Identities = 24/51 (47%), Positives = 30/51 (58%)

Query:    65 SVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTK 115
             S  Q+ ALEK FE    L    + +LA  LG+   QV VWFQNRR +W+ K
Sbjct:   168 SGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKK 218


>UNIPROTKB|E1C0H3 [details] [associations]
            symbol:NKX6-3 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0000976 GeneTree:ENSGT00680000099625 CTD:157848 OMA:SFYKLSP
            KO:K09351 EMBL:AADN02054827 IPI:IPI00600356 RefSeq:XP_428808.2
            Ensembl:ENSGALT00000017098 GeneID:431254 KEGG:gga:431254
            NextBio:20830730 Uniprot:E1C0H3
        Length = 259

 Score = 118 (46.6 bits), Expect = 8.2e-05, P = 8.2e-05
 Identities = 23/48 (47%), Positives = 29/48 (60%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTK 115
             Q+ ALEK FE    L    + +LA  LG+   QV VWFQNRR +W+ K
Sbjct:   149 QIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKK 196


>UNIPROTKB|E2R395 [details] [associations]
            symbol:NKX6-3 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
            CTD:157848 KO:K09351 RefSeq:XP_849158.1 Ensembl:ENSCAFT00000009208
            GeneID:607413 KEGG:cfa:607413 NextBio:20893140 Uniprot:E2R395
        Length = 262

 Score = 118 (46.6 bits), Expect = 8.5e-05, P = 8.5e-05
 Identities = 23/48 (47%), Positives = 29/48 (60%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTK 115
             Q+ ALEK FE    L    + +LA  LG+   QV VWFQNRR +W+ K
Sbjct:   150 QIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKK 197


>MGI|MGI:1921811 [details] [associations]
            symbol:Nkx6-3 "NK6 homeobox 3" species:10090 "Mus musculus"
            [GO:0000976 "transcription regulatory region sequence-specific DNA
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 MGI:MGI:1921811 GO:GO:0005634
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976 HSSP:P06601
            GeneTree:ENSGT00680000099625 eggNOG:NOG265304 HOGENOM:HOG000060127
            HOVERGEN:HBG070987 CTD:157848 OMA:SFYKLSP OrthoDB:EOG44TP8F
            EMBL:DQ093570 EMBL:AK018683 EMBL:AK147163 IPI:IPI00316492
            RefSeq:NP_083278.1 UniGene:Mm.290028 ProteinModelPortal:Q3UHX8
            SMR:Q3UHX8 STRING:Q3UHX8 PhosphoSite:Q3UHX8 PRIDE:Q3UHX8
            Ensembl:ENSMUST00000071588 GeneID:74561 KEGG:mmu:74561
            InParanoid:Q3UHX8 KO:K09351 NextBio:341094 Bgee:Q3UHX8
            Genevestigator:Q3UHX8 Uniprot:Q3UHX8
        Length = 262

 Score = 118 (46.6 bits), Expect = 8.5e-05, P = 8.5e-05
 Identities = 23/48 (47%), Positives = 29/48 (60%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTK 115
             Q+ ALEK FE    L    + +LA  LG+   QV VWFQNRR +W+ K
Sbjct:   151 QIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKK 198


>RGD|1597780 [details] [associations]
            symbol:Nkx6-3 "NK6 homeobox 3" species:10116 "Rattus norvegicus"
            [GO:0000976 "transcription regulatory region sequence-specific DNA
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:1597780
            GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976 EMBL:CH473970
            GeneTree:ENSGT00680000099625 CTD:157848 OMA:SFYKLSP
            OrthoDB:EOG44TP8F KO:K09351 IPI:IPI00191962 RefSeq:NP_001102925.1
            UniGene:Rn.132252 Ensembl:ENSRNOT00000024532 GeneID:685102
            KEGG:rno:685102 UCSC:RGD:1597780 NextBio:728965 Uniprot:D3ZCL0
        Length = 262

 Score = 118 (46.6 bits), Expect = 8.5e-05, P = 8.5e-05
 Identities = 23/48 (47%), Positives = 29/48 (60%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTK 115
             Q+ ALEK FE    L    + +LA  LG+   QV VWFQNRR +W+ K
Sbjct:   151 QIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKK 198


>UNIPROTKB|E1BA63 [details] [associations]
            symbol:LOC784372 "Uncharacterized protein" species:9913
            "Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
            GeneTree:ENSGT00680000099625 OMA:SFYKLSP KO:K09351
            EMBL:DAAA02060932 IPI:IPI00688482 RefSeq:XP_002698770.1
            Ensembl:ENSBTAT00000047361 GeneID:784372 KEGG:bta:784372
            NextBio:20926655 Uniprot:E1BA63
        Length = 263

 Score = 118 (46.6 bits), Expect = 8.6e-05, P = 8.6e-05
 Identities = 23/48 (47%), Positives = 29/48 (60%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTK 115
             Q+ ALEK FE    L    + +LA  LG+   QV VWFQNRR +W+ K
Sbjct:   150 QIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKK 197


>UNIPROTKB|A6NJ46 [details] [associations]
            symbol:NKX6-3 "Homeobox protein Nkx-6.3" species:9606 "Homo
            sapiens" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 EMBL:CH471080
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976 EMBL:AC113133
            HOGENOM:HOG000060127 HOVERGEN:HBG070987 EMBL:AK057898
            IPI:IPI00065178 IPI:IPI00784472 RefSeq:NP_689781.1
            UniGene:Hs.647132 ProteinModelPortal:A6NJ46 SMR:A6NJ46
            STRING:A6NJ46 PhosphoSite:A6NJ46 PRIDE:A6NJ46 DNASU:157848
            Ensembl:ENST00000425142 Ensembl:ENST00000518699
            Ensembl:ENST00000524115 GeneID:157848 KEGG:hsa:157848
            UCSC:uc003xoa.2 CTD:157848 GeneCards:GC08M041503 HGNC:HGNC:26328
            HPA:HPA042790 MIM:610772 neXtProt:NX_A6NJ46 PharmGKB:PA145148400
            eggNOG:NOG258693 OMA:SFYKLSP OrthoDB:EOG44TP8F ChiTaRS:NKX6-3
            GenomeRNAi:157848 NextBio:87562 Bgee:A6NJ46 CleanEx:HS_NKX6-3
            Genevestigator:A6NJ46 Uniprot:A6NJ46
        Length = 265

 Score = 118 (46.6 bits), Expect = 8.7e-05, P = 8.7e-05
 Identities = 23/48 (47%), Positives = 29/48 (60%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTK 115
             Q+ ALEK FE    L    + +LA  LG+   QV VWFQNRR +W+ K
Sbjct:   150 QIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKK 197


>UNIPROTKB|A5D7C5 [details] [associations]
            symbol:MEOX2 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060173 "limb
            development" evidence=IEA] [GO:0060021 "palate development"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0001757
            "somite specification" evidence=IEA] [GO:0001525 "angiogenesis"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
            GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
            GO:GO:0060173 eggNOG:NOG250192 GO:GO:0007519 GO:GO:0001757
            GeneTree:ENSGT00660000095141 HOGENOM:HOG000230987
            HOVERGEN:HBG052456 KO:K09322 CTD:4223 OMA:DHTLFGC OrthoDB:EOG4PZJ7H
            EMBL:DAAA02009993 EMBL:DAAA02009994 EMBL:DAAA02009995 EMBL:BC140506
            IPI:IPI00711174 RefSeq:NP_001091514.1 UniGene:Bt.63482 SMR:A5D7C5
            Ensembl:ENSBTAT00000004198 GeneID:518540 KEGG:bta:518540
            InParanoid:A5D7C5 NextBio:20872676 Uniprot:A5D7C5
        Length = 303

 Score = 119 (46.9 bits), Expect = 9.0e-05, P = 9.0e-05
 Identities = 37/117 (31%), Positives = 51/117 (43%)

Query:     5 LCSSDDSLGALM---SICPATD--EQ--SPRNNQVYSREFQTMXXXXXXXXXXXXXXXHV 57
             LCS+  SLG+     + CP  D   Q  SP   +  S   +                   
Sbjct:   126 LCSNSSSLGSSTPTGAACPPGDYGRQALSPAEAEKRSGSKRKSDSSDSQEGNYKSEVNSK 185

Query:    58 SEKKRR-LSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 113
               K+R   + +Q++ LE  F   N L   R+ ++A  L L  RQV VWFQNRR +WK
Sbjct:   186 PRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWK 242


>UNIPROTKB|E2R2R4 [details] [associations]
            symbol:HLX "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0048557 "embryonic digestive tract
            morphogenesis" evidence=IEA] [GO:0048484 "enteric nervous system
            development" evidence=IEA] [GO:0046622 "positive regulation of
            organ growth" evidence=IEA] [GO:0045629 "negative regulation of
            T-helper 2 cell differentiation" evidence=IEA] [GO:0045627
            "positive regulation of T-helper 1 cell differentiation"
            evidence=IEA] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IEA] [GO:0007519 "skeletal muscle tissue
            development" evidence=IEA] [GO:0001889 "liver development"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0008284 GO:GO:0001889
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0046622 GO:GO:0000976 GO:GO:0048484
            GO:GO:0045629 GO:GO:0007519 GO:GO:0045627 GO:GO:0048557
            Ensembl:ENSCAFT00000018023 Uniprot:E2R2R4
        Length = 405

 Score = 121 (47.7 bits), Expect = 9.2e-05, P = 9.2e-05
 Identities = 28/57 (49%), Positives = 37/57 (64%)

Query:    68 QVKALEKNFEVENKL-EPERKVKLAQELGLQPRQVAVWFQNRRARW---KTKQLERD 120
             Q K LEK FE++  + +P+RK +LA  LGL   QV VWFQNRR +W   K  Q ++D
Sbjct:   287 QRKGLEKRFEIQKYVTKPDRK-QLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQKD 342


>ZFIN|ZDB-GENE-010108-2 [details] [associations]
            symbol:vent "ventral expressed homeobox" species:7955
            "Danio rerio" [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0009953
            "dorsal/ventral pattern formation" evidence=IGI] [GO:0042661
            "regulation of mesodermal cell fate specification" evidence=IGI]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            ZFIN:ZDB-GENE-010108-2 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0009953 HSSP:P06602 GO:GO:0042661 eggNOG:NOG150160
            GeneTree:ENSGT00610000086217 OrthoDB:EOG44TP97 EMBL:CABZ01072677
            EMBL:AF255044 EMBL:AF277077 IPI:IPI00511939 RefSeq:NP_571775.1
            UniGene:Dr.106743 STRING:Q9DGM9 Ensembl:ENSDART00000017456
            GeneID:64810 KEGG:dre:64810 CTD:64810 HOGENOM:HOG000206355
            InParanoid:Q9DGM9 OMA:RRMRTKF NextBio:20901999 Uniprot:Q9DGM9
        Length = 170

 Score = 111 (44.1 bits), Expect = 9.4e-05, P = 9.4e-05
 Identities = 28/82 (34%), Positives = 42/82 (51%)

Query:    61 KRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERD 120
             + + + DQ+  LEK+F     L   ++ K+A++L L   QV  WFQNRR   K K+  +D
Sbjct:    68 RTKFTCDQISGLEKSFSKHRYLGATQRRKIAEKLHLSETQVKTWFQNRRM--KLKREVQD 125

Query:   121 YGVLKANYDALKLNYDSLQHDN 142
                    Y A+     SLQH +
Sbjct:   126 MRAADFLYPAVFPPMTSLQHQS 147


>UNIPROTKB|F1NLW0 [details] [associations]
            symbol:LOC100858514 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
            IPI:IPI00573429 OMA:EHKDEGP EMBL:AADN02000985 EMBL:AADN02000986
            Ensembl:ENSGALT00000018013 Uniprot:F1NLW0
        Length = 187

 Score = 113 (44.8 bits), Expect = 9.8e-05, P = 9.8e-05
 Identities = 24/77 (31%), Positives = 37/77 (48%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKAN 127
             Q   LEK F     L   R++++A  L L  RQ+ +WFQNRR +WK +  E        N
Sbjct:   108 QTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKEESSSTPAPN 167

Query:   128 YD-ALKLNYDSLQHDNE 143
                +   + + ++ D E
Sbjct:   168 EPTSAAASVEKVEEDEE 184


>FB|FBgn0000529 [details] [associations]
            symbol:bsh "brain-specific homeobox" species:7227 "Drosophila
            melanogaster" [GO:0007420 "brain development" evidence=NAS;IMP]
            [GO:0005634 "nucleus" evidence=ISS;NAS;IDA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA;NAS] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0000976 "transcription regulatory
            region sequence-specific DNA binding" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0007420
            EMBL:AE014134 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
            GeneTree:ENSGT00700000104097 eggNOG:NOG242366 EMBL:BT022203
            EMBL:L06475 RefSeq:NP_477350.1 RefSeq:NP_995728.2 UniGene:Dm.25407
            ProteinModelPortal:Q04787 SMR:Q04787 DIP:DIP-17210N IntAct:Q04787
            MINT:MINT-285443 STRING:Q04787 EnsemblMetazoa:FBtr0089320
            GeneID:35266 KEGG:dme:Dmel_CG10604 CTD:35266 FlyBase:FBgn0000529
            InParanoid:Q04787 OMA:TPFSIEH OrthoDB:EOG4QNKC1 PhylomeDB:Q04787
            GenomeRNAi:35266 NextBio:792701 Bgee:Q04787 GermOnline:CG10604
            Uniprot:Q04787
        Length = 429

 Score = 121 (47.7 bits), Expect = 0.00010, P = 0.00010
 Identities = 30/66 (45%), Positives = 36/66 (54%)

Query:    56 HVSEKKRR--LSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 113
             H   +K R   S  Q+  LEK FE +  L    +V+LA  LGL   QV  WFQNRR + K
Sbjct:   271 HCRRRKARTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHK 330

Query:   114 TKQLER 119
              KQL R
Sbjct:   331 -KQLRR 335


>UNIPROTKB|J9P485 [details] [associations]
            symbol:EMX2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
            GeneTree:ENSGT00680000099625 EMBL:AAEX03015567 EMBL:AAEX03015568
            EMBL:AAEX03015569 Ensembl:ENSCAFT00000043720 Uniprot:J9P485
        Length = 134

 Score = 99 (39.9 bits), Expect = 0.00010, P = 0.00010
 Identities = 22/56 (39%), Positives = 32/56 (57%)

Query:    65 SVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERD 120
             S  Q+  LE  FE  + +    + +LA  L L   QV VWFQNRR ++K ++LE +
Sbjct:    44 SPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTKFKRQKLEEE 99


>UNIPROTKB|F6XFB6 [details] [associations]
            symbol:HLX "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
            GeneTree:ENSGT00700000104097 OMA:AHPHASF Ensembl:ENSCAFT00000018023
            EMBL:AAEX03018361 EMBL:AAEX03018362 Uniprot:F6XFB6
        Length = 438

 Score = 121 (47.7 bits), Expect = 0.00010, P = 0.00010
 Identities = 28/57 (49%), Positives = 37/57 (64%)

Query:    68 QVKALEKNFEVENKL-EPERKVKLAQELGLQPRQVAVWFQNRRARW---KTKQLERD 120
             Q K LEK FE++  + +P+RK +LA  LGL   QV VWFQNRR +W   K  Q ++D
Sbjct:   287 QRKGLEKRFEIQKYVTKPDRK-QLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQKD 342


>UNIPROTKB|Q06615 [details] [associations]
            symbol:noto "Homeobox protein notochord" species:8355
            "Xenopus laevis" [GO:0005634 "nucleus" evidence=IC] [GO:0014028
            "notochord formation" evidence=IMP] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=IDA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0045892
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976 GO:GO:0014028
            HOVERGEN:HBG082047 EMBL:Z19577 EMBL:BC123237 PIR:A46305
            RefSeq:NP_001081625.1 UniGene:Xl.35 HSSP:P14653
            ProteinModelPortal:Q06615 GeneID:397961 KEGG:xla:397961 CTD:397961
            Xenbase:XB-GENE-865187 Uniprot:Q06615
        Length = 236

 Score = 116 (45.9 bits), Expect = 0.00011, P = 0.00011
 Identities = 30/93 (32%), Positives = 49/93 (52%)

Query:    67 DQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKA 126
             +Q++ LEK F  +  +    +V LA  L L   QV VWFQNRR +W+ + LE+    L +
Sbjct:   148 EQLEKLEKEFLKQQYMVGTERVDLASTLNLTETQVKVWFQNRRIKWRKQSLEQKKAKL-S 206

Query:   127 NYDALKLNYDSLQHDNEALLKEIRELKSKLNEE 159
              +  +    DS  H +++  +E  E +  L+ E
Sbjct:   207 QFGVIPA--DSSDHTDDS--RETEEDEDDLDVE 235


>UNIPROTKB|F1SAC8 [details] [associations]
            symbol:NOBOX "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 OMA:CPQALGH
            GeneTree:ENSGT00650000093445 EMBL:FP089699 EMBL:FP565161
            Ensembl:ENSSSCT00000016847 Ensembl:ENSSSCT00000029776
            Uniprot:F1SAC8
        Length = 472

 Score = 121 (47.7 bits), Expect = 0.00012, P = 0.00012
 Identities = 27/72 (37%), Positives = 48/72 (66%)

Query:    59 EKKRRL-SVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQL 117
             +K R L   DQ++ LEK F+ ++  + E++ ++AQ + + P+++ VWFQNRRA+W+  ++
Sbjct:   189 KKTRTLYRSDQLEELEKFFQEDHYPDSEKRREIAQTVNVAPQRIMVWFQNRRAKWR--KV 246

Query:   118 ERDYGVLKANYD 129
             E+  G  K N D
Sbjct:   247 EKMNG--KENKD 256


>MGI|MGI:96109 [details] [associations]
            symbol:Hlx "H2.0-like homeobox" species:10090 "Mus musculus"
            [GO:0000976 "transcription regulatory region sequence-specific DNA
            binding" evidence=IEA] [GO:0001889 "liver development"
            evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007519 "skeletal muscle tissue development" evidence=IMP]
            [GO:0008284 "positive regulation of cell proliferation"
            evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=ISO]
            [GO:0045627 "positive regulation of T-helper 1 cell
            differentiation" evidence=IGI;IMP] [GO:0045629 "negative regulation
            of T-helper 2 cell differentiation" evidence=IGI;IMP] [GO:0046622
            "positive regulation of organ growth" evidence=IMP] [GO:0048484
            "enteric nervous system development" evidence=IMP] [GO:0048513
            "organ development" evidence=IMP] [GO:0048557 "embryonic digestive
            tract morphogenesis" evidence=IMP] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 MGI:MGI:96109 GO:GO:0005634 GO:GO:0030154
            GO:GO:0008284 GO:GO:0001889 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0046622 GO:GO:0000976 GO:GO:0048484
            GeneTree:ENSGT00700000104097 GO:GO:0045629 GO:GO:0007519
            GO:GO:0045627 GO:GO:0048557 CTD:3142 eggNOG:NOG331357
            HOGENOM:HOG000112911 HOVERGEN:HBG000457 KO:K09339 OMA:AHPHASF
            OrthoDB:EOG473PRM EMBL:X58250 IPI:IPI00123711 PIR:A39621
            RefSeq:NP_032276.1 UniGene:Mm.1347 ProteinModelPortal:Q61670
            SMR:Q61670 STRING:Q61670 PRIDE:Q61670 Ensembl:ENSMUST00000048572
            GeneID:15284 KEGG:mmu:15284 InParanoid:Q61670 NextBio:287919
            Bgee:Q61670 CleanEx:MM_HLX Genevestigator:Q61670
            GermOnline:ENSMUSG00000039377 Uniprot:Q61670
        Length = 476

 Score = 121 (47.7 bits), Expect = 0.00012, P = 0.00012
 Identities = 28/57 (49%), Positives = 37/57 (64%)

Query:    68 QVKALEKNFEVENKL-EPERKVKLAQELGLQPRQVAVWFQNRRARW---KTKQLERD 120
             Q K LEK FE++  + +P+RK +LA  LGL   QV VWFQNRR +W   K  Q ++D
Sbjct:   284 QRKGLEKRFEIQKYVTKPDRK-QLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQKD 339


>RGD|1311961 [details] [associations]
            symbol:Hlx "H2.0-like homeobox" species:10116 "Rattus
            norvegicus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0001889 "liver
            development" evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
            evidence=IEA;ISO] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IEA;ISO] [GO:0030154 "cell differentiation"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=ISO] [GO:0045627 "positive regulation of T-helper 1 cell
            differentiation" evidence=IEA;ISO] [GO:0045629 "negative regulation
            of T-helper 2 cell differentiation" evidence=IEA;ISO] [GO:0046622
            "positive regulation of organ growth" evidence=IEA;ISO] [GO:0048484
            "enteric nervous system development" evidence=IEA;ISO] [GO:0048513
            "organ development" evidence=ISO] [GO:0048557 "embryonic digestive
            tract morphogenesis" evidence=IEA;ISO] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 RGD:1311961 GO:GO:0005634 GO:GO:0030154 GO:GO:0008284
            GO:GO:0001889 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0046622
            GO:GO:0000976 GO:GO:0048484 GeneTree:ENSGT00700000104097
            GO:GO:0045629 GO:GO:0007519 GO:GO:0045627 GO:GO:0048557 CTD:3142
            eggNOG:NOG331357 HOGENOM:HOG000112911 HOVERGEN:HBG000457 KO:K09339
            OMA:AHPHASF OrthoDB:EOG473PRM EMBL:BC127513 IPI:IPI00194237
            RefSeq:NP_001071142.1 UniGene:Rn.35243 ProteinModelPortal:A0JPN1
            SMR:A0JPN1 Ensembl:ENSRNOT00000003155 GeneID:364069 KEGG:rno:364069
            UCSC:RGD:1311961 InParanoid:A0JPN1 NextBio:684784
            Genevestigator:A0JPN1 Uniprot:A0JPN1
        Length = 476

 Score = 121 (47.7 bits), Expect = 0.00012, P = 0.00012
 Identities = 28/57 (49%), Positives = 37/57 (64%)

Query:    68 QVKALEKNFEVENKL-EPERKVKLAQELGLQPRQVAVWFQNRRARW---KTKQLERD 120
             Q K LEK FE++  + +P+RK +LA  LGL   QV VWFQNRR +W   K  Q ++D
Sbjct:   284 QRKGLEKRFEIQKYVTKPDRK-QLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQKD 339


>UNIPROTKB|P14840 [details] [associations]
            symbol:HOXB4 "Homeobox protein Hox-B4" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
            OrthoDB:EOG4GTKF7 CTD:3214 EMBL:X17612 IPI:IPI00572832 PIR:S10092
            RefSeq:NP_990624.1 UniGene:Gga.39784 ProteinModelPortal:P14840
            SMR:P14840 STRING:P14840 GeneID:396230 KEGG:gga:396230
            eggNOG:NOG297644 InParanoid:P14840 NextBio:20816282 Uniprot:P14840
        Length = 245

 Score = 116 (45.9 bits), Expect = 0.00012, P = 0.00012
 Identities = 22/46 (47%), Positives = 28/46 (60%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 113
             QV  LEK F     L   R+V++A  L L  RQ+ +WFQNRR +WK
Sbjct:   161 QVLELEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRMKWK 206


>UNIPROTKB|A7MB54 [details] [associations]
            symbol:HLX "H2.0-like homeobox protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048557 "embryonic
            digestive tract morphogenesis" evidence=IEA] [GO:0048484 "enteric
            nervous system development" evidence=IEA] [GO:0046622 "positive
            regulation of organ growth" evidence=IEA] [GO:0045629 "negative
            regulation of T-helper 2 cell differentiation" evidence=IEA]
            [GO:0045627 "positive regulation of T-helper 1 cell
            differentiation" evidence=IEA] [GO:0008284 "positive regulation of
            cell proliferation" evidence=IEA] [GO:0007519 "skeletal muscle
            tissue development" evidence=IEA] [GO:0001889 "liver development"
            evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0000976 "transcription regulatory
            region sequence-specific DNA binding" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0030154
            GO:GO:0008284 GO:GO:0001889 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0046622 GO:GO:0000976 GO:GO:0048484
            GeneTree:ENSGT00700000104097 GO:GO:0045629 GO:GO:0007519
            GO:GO:0045627 GO:GO:0048557 EMBL:BC151345 IPI:IPI00688900
            RefSeq:NP_001094567.1 UniGene:Bt.58987 ProteinModelPortal:A7MB54
            SMR:A7MB54 PRIDE:A7MB54 Ensembl:ENSBTAT00000019352 GeneID:519165
            KEGG:bta:519165 CTD:3142 eggNOG:NOG331357 HOGENOM:HOG000112911
            HOVERGEN:HBG000457 InParanoid:A7MB54 KO:K09339 OMA:AHPHASF
            OrthoDB:EOG473PRM NextBio:20872819 Uniprot:A7MB54
        Length = 486

 Score = 121 (47.7 bits), Expect = 0.00012, P = 0.00012
 Identities = 28/57 (49%), Positives = 37/57 (64%)

Query:    68 QVKALEKNFEVENKL-EPERKVKLAQELGLQPRQVAVWFQNRRARW---KTKQLERD 120
             Q K LEK FE++  + +P+RK +LA  LGL   QV VWFQNRR +W   K  Q ++D
Sbjct:   287 QRKGLEKRFEIQKYVTKPDRK-QLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQKD 342


>UNIPROTKB|Q14774 [details] [associations]
            symbol:HLX "H2.0-like homeobox protein" species:9606 "Homo
            sapiens" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
            [GO:0001889 "liver development" evidence=IEA] [GO:0007519 "skeletal
            muscle tissue development" evidence=IEA] [GO:0008284 "positive
            regulation of cell proliferation" evidence=IEA] [GO:0045627
            "positive regulation of T-helper 1 cell differentiation"
            evidence=IEA] [GO:0045629 "negative regulation of T-helper 2 cell
            differentiation" evidence=IEA] [GO:0046622 "positive regulation of
            organ growth" evidence=IEA] [GO:0048484 "enteric nervous system
            development" evidence=IEA] [GO:0048557 "embryonic digestive tract
            morphogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IDA]
            [GO:0007275 "multicellular organismal development" evidence=TAS]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0030154 Pathway_Interaction_DB:il12_2pathway EMBL:CH471100
            GO:GO:0008284 GO:GO:0043565 GO:GO:0001889 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0046622 GO:GO:0000976 GO:GO:0048484
            GO:GO:0045629 GO:GO:0007519 GO:GO:0045627 GO:GO:0048557 CTD:3142
            eggNOG:NOG331357 HOGENOM:HOG000112911 HOVERGEN:HBG000457 KO:K09339
            OrthoDB:EOG473PRM EMBL:M60721 EMBL:AF217621 EMBL:AK313298
            EMBL:AB208812 EMBL:AL445423 EMBL:BC007294 EMBL:BC033808 EMBL:U14328
            EMBL:U14325 EMBL:U14326 EMBL:U14327 EMBL:S56767 IPI:IPI00292164
            PIR:A55180 RefSeq:NP_068777.1 UniGene:Hs.74870
            ProteinModelPortal:Q14774 SMR:Q14774 STRING:Q14774
            PhosphoSite:Q14774 DMDM:160291960 PaxDb:Q14774 PRIDE:Q14774
            DNASU:3142 Ensembl:ENST00000366903 GeneID:3142 KEGG:hsa:3142
            UCSC:uc001hmv.4 GeneCards:GC01P221052 H-InvDB:HIX0001609
            HGNC:HGNC:4978 HPA:HPA005968 MIM:142995 neXtProt:NX_Q14774
            PharmGKB:PA162391017 InParanoid:Q14774 PhylomeDB:Q14774
            GenomeRNAi:3142 NextBio:12460 ArrayExpress:Q14774 Bgee:Q14774
            CleanEx:HS_HLX Genevestigator:Q14774 GermOnline:ENSG00000136630
            Uniprot:Q14774
        Length = 488

 Score = 121 (47.7 bits), Expect = 0.00012, P = 0.00012
 Identities = 28/57 (49%), Positives = 37/57 (64%)

Query:    68 QVKALEKNFEVENKL-EPERKVKLAQELGLQPRQVAVWFQNRRARW---KTKQLERD 120
             Q K LEK FE++  + +P+RK +LA  LGL   QV VWFQNRR +W   K  Q ++D
Sbjct:   287 QRKGLEKRFEIQKYVTKPDRK-QLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQKD 342


>UNIPROTKB|F1MRG3 [details] [associations]
            symbol:NOBOX "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0001541 "ovarian
            follicle development" evidence=IEA] [GO:0043565 "sequence-specific
            DNA binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            Pfam:PF00046 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GO:GO:0001541 CTD:135935 OMA:CPQALGH
            GeneTree:ENSGT00650000093445 EMBL:DAAA02011823 IPI:IPI00693587
            RefSeq:XP_002687182.2 RefSeq:XP_606837.6 UniGene:Bt.106636
            Ensembl:ENSBTAT00000012965 GeneID:528414 KEGG:bta:528414
            Uniprot:F1MRG3
        Length = 499

 Score = 121 (47.7 bits), Expect = 0.00013, P = 0.00013
 Identities = 22/58 (37%), Positives = 42/58 (72%)

Query:    57 VSEKKRRL-SVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 113
             V +K R L   DQ++ LE+ F+ ++  + +++ ++AQ +G+ P+++ VWFQNRRA+W+
Sbjct:   116 VRKKTRTLYRSDQLEELERLFQDDHYPDSDKRREIAQTVGVTPQRIMVWFQNRRAKWR 173


>UNIPROTKB|Q60554 [details] [associations]
            symbol:NKX6-1 "Homeobox protein Nkx-6.1" species:10036
            "Mesocricetus auratus" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IMP]
            [GO:0031016 "pancreas development" evidence=IMP] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IMP] [GO:0051091 "positive regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IMP] [GO:0051594 "detection of glucose" evidence=IDA]
            [GO:0072560 "type B pancreatic cell maturation" evidence=IMP]
            [GO:2000078 "positive regulation of type B pancreatic cell
            development" evidence=IMP] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0051091 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0000122 GO:GO:0000976 GO:GO:2000078 GO:GO:0051594
            HOVERGEN:HBG070987 GO:GO:0072560 EMBL:X81409 PIR:I48188
            ProteinModelPortal:Q60554 SMR:Q60554 Uniprot:Q60554
        Length = 364

 Score = 119 (46.9 bits), Expect = 0.00013, P = 0.00013
 Identities = 24/51 (47%), Positives = 30/51 (58%)

Query:    65 SVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTK 115
             S  Q+ ALEK FE    L    + +LA  LG+   QV VWFQNRR +W+ K
Sbjct:   244 SGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKK 294


>FB|FBgn0004054 [details] [associations]
            symbol:zen2 "zerknullt-related" species:7227 "Drosophila
            melanogaster" [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0005634 "nucleus"
            evidence=ISS;NAS] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0007450
            "dorsal/ventral pattern formation, imaginal disc" evidence=NAS]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            EMBL:AE014297 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 KO:K09311 EMBL:AE001572
            eggNOG:NOG325574 ChiTaRS:br GeneTree:ENSGT00700000104161
            EMBL:X68348 PIR:B43697 RefSeq:NP_476794.1 UniGene:Dm.27226
            ProteinModelPortal:P09090 SMR:P09090 EnsemblMetazoa:FBtr0081671
            GeneID:40827 KEGG:dme:Dmel_CG1048 CTD:40827 FlyBase:FBgn0004054
            InParanoid:P09090 OMA:CWDSNSS OrthoDB:EOG4KD53G PhylomeDB:P09090
            GenomeRNAi:40827 NextBio:820795 Bgee:P09090 GermOnline:CG1048
            Uniprot:P09090
        Length = 252

 Score = 116 (45.9 bits), Expect = 0.00013, P = 0.00013
 Identities = 32/99 (32%), Positives = 51/99 (51%)

Query:    58 SEKKRR----LSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 113
             SEK +R     S  Q+  LE+ F +   L   R+++++Q L L  RQV +WFQNRR + K
Sbjct:    40 SEKSKRSRTAFSSLQLIELEREFHLNKYLARTRRIEISQRLALTERQVKIWFQNRRMKLK 99

Query:   114 TKQLERD--YGVLKANYDALKLNYDSLQHDNEALLKEIR 150
              K   R    G L  +      + + LQ D++ + + +R
Sbjct:   100 -KSTNRKGAIGALTTSIPLSSQSSEDLQKDDQIVERLLR 137


>MGI|MGI:1206039 [details] [associations]
            symbol:Nkx6-1 "NK6 homeobox 1" species:10090 "Mus musculus"
            [GO:0000976 "transcription regulatory region sequence-specific DNA
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0003682 "chromatin binding" evidence=ISO] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISO;TAS] [GO:0005634 "nucleus" evidence=ISO;IDA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=TAS] [GO:0006357 "regulation of transcription from RNA
            polymerase II promoter" evidence=ISO;IMP] [GO:0006366
            "transcription from RNA polymerase II promoter" evidence=ISO]
            [GO:0007224 "smoothened signaling pathway" evidence=IDA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0008283 "cell proliferation" evidence=ISO] [GO:0021912
            "regulation of transcription from RNA polymerase II promoter
            involved in spinal cord motor neuron fate specification"
            evidence=IGI] [GO:0021913 "regulation of transcription from RNA
            polymerase II promoter involved in ventral spinal cord interneuron
            specification" evidence=IMP] [GO:0022008 "neurogenesis"
            evidence=ISO] [GO:0030154 "cell differentiation" evidence=IGI;IMP]
            [GO:0031018 "endocrine pancreas development" evidence=IGI;IMP]
            [GO:0032024 "positive regulation of insulin secretion"
            evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
            evidence=ISO] [GO:0044424 "intracellular part" evidence=IDA]
            [GO:0045666 "positive regulation of neuron differentiation"
            evidence=IDA] [GO:0045686 "negative regulation of glial cell
            differentiation" evidence=IGI] [GO:0045687 "positive regulation of
            glial cell differentiation" evidence=IGI] [GO:0048709
            "oligodendrocyte differentiation" evidence=IGI]
            Reactome:REACT_13641 InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 MGI:MGI:1206039
            GO:GO:0005829 GO:GO:0005634 GO:GO:0042493 GO:GO:0008283
            GO:GO:0032024 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            Reactome:REACT_127416 GO:GO:0035094 GO:GO:0045666 GO:GO:0031018
            GO:GO:0000976 GO:GO:0071375 GO:GO:0007224 GO:GO:0048709
            GO:GO:0003323 GO:GO:0071345 GeneTree:ENSGT00680000099625
            GO:GO:0021913 GO:GO:0045687 GO:GO:0045686 CTD:4825 eggNOG:NOG265304
            HOGENOM:HOG000060127 HOVERGEN:HBG070987 KO:K08030 OMA:TPLYPAY
            OrthoDB:EOG4JT064 GO:GO:0021912 EMBL:AF357883 EMBL:BC138019
            EMBL:BC138020 EMBL:AF291666 IPI:IPI00117513 RefSeq:NP_659204.1
            UniGene:Mm.193072 ProteinModelPortal:Q99MA9 SMR:Q99MA9
            STRING:Q99MA9 PhosphoSite:Q99MA9 PRIDE:Q99MA9
            Ensembl:ENSMUST00000044125 GeneID:18096 KEGG:mmu:18096
            UCSC:uc008yim.1 InParanoid:B2RQP4 NextBio:293251 Bgee:Q99MA9
            Genevestigator:Q99MA9 GermOnline:ENSMUSG00000035187 Uniprot:Q99MA9
        Length = 365

 Score = 119 (46.9 bits), Expect = 0.00013, P = 0.00013
 Identities = 24/51 (47%), Positives = 30/51 (58%)

Query:    65 SVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTK 115
             S  Q+ ALEK FE    L    + +LA  LG+   QV VWFQNRR +W+ K
Sbjct:   245 SGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKK 295


>RGD|69318 [details] [associations]
            symbol:Nkx6-1 "NK6 homeobox 1" species:10116 "Rattus norvegicus"
           [GO:0000976 "transcription regulatory region sequence-specific DNA
           binding" evidence=IEA] [GO:0003323 "type B pancreatic cell
           development" evidence=IEP] [GO:0003682 "chromatin binding"
           evidence=IDA] [GO:0003700 "sequence-specific DNA binding
           transcription factor activity" evidence=IDA] [GO:0005634 "nucleus"
           evidence=ISO;IDA] [GO:0006357 "regulation of transcription from RNA
           polymerase II promoter" evidence=ISO] [GO:0006366 "transcription
           from RNA polymerase II promoter" evidence=IMP] [GO:0007224
           "smoothened signaling pathway" evidence=IEA;ISO] [GO:0008283 "cell
           proliferation" evidence=IMP] [GO:0021912 "regulation of
           transcription from RNA polymerase II promoter involved in spinal
           cord motor neuron fate specification" evidence=IEA;ISO] [GO:0021913
           "regulation of transcription from RNA polymerase II promoter
           involved in ventral spinal cord interneuron specification"
           evidence=IEA;ISO] [GO:0022008 "neurogenesis" evidence=IMP]
           [GO:0030154 "cell differentiation" evidence=ISO] [GO:0031018
           "endocrine pancreas development" evidence=ISO] [GO:0032024 "positive
           regulation of insulin secretion" evidence=IMP] [GO:0035094 "response
           to nicotine" evidence=IEP] [GO:0042493 "response to drug"
           evidence=IEP] [GO:0043565 "sequence-specific DNA binding"
           evidence=IDA] [GO:0044424 "intracellular part" evidence=ISO]
           [GO:0045666 "positive regulation of neuron differentiation"
           evidence=IEA;ISO] [GO:0045686 "negative regulation of glial cell
           differentiation" evidence=IEA;ISO] [GO:0045687 "positive regulation
           of glial cell differentiation" evidence=IEA;ISO] [GO:0048709
           "oligodendrocyte differentiation" evidence=IEA;ISO] [GO:0071345
           "cellular response to cytokine stimulus" evidence=IEP] [GO:0071375
           "cellular response to peptide hormone stimulus" evidence=IEP]
           [GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000047
           InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
           Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
           SMART:SM00389 RGD:69318 GO:GO:0005634 GO:GO:0022008 GO:GO:0042493
           GO:GO:0008283 GO:GO:0043565 GO:GO:0032024 GO:GO:0003700
           GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
           SUPFAM:SSF46689 GO:GO:0006366 GO:GO:0035094 GO:GO:0045666
           GO:GO:0000976 GO:GO:0071375 GO:GO:0007224 GO:GO:0048709
           GO:GO:0003323 GO:GO:0071345 GeneTree:ENSGT00680000099625
           GO:GO:0021913 GO:GO:0045687 GO:GO:0045686 CTD:4825 eggNOG:NOG265304
           HOGENOM:HOG000060127 HOVERGEN:HBG070987 KO:K08030 OMA:TPLYPAY
           OrthoDB:EOG4JT064 GO:GO:0021912 EMBL:AF004431 IPI:IPI00212312
           RefSeq:NP_113925.1 UniGene:Rn.11387 ProteinModelPortal:O35762
           SMR:O35762 STRING:O35762 Ensembl:ENSRNOT00000002928 GeneID:65193
           KEGG:rno:65193 InParanoid:O35762 NextBio:614120
           Genevestigator:O35762 GermOnline:ENSRNOG00000002149 Uniprot:O35762
        Length = 365

 Score = 119 (46.9 bits), Expect = 0.00013, P = 0.00013
 Identities = 24/51 (47%), Positives = 30/51 (58%)

Query:    65 SVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTK 115
             S  Q+ ALEK FE    L    + +LA  LG+   QV VWFQNRR +W+ K
Sbjct:   245 SGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKK 295


>MGI|MGI:96179 [details] [associations]
            symbol:Hoxa7 "homeobox A7" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=ISO;IDA] [GO:0001953 "negative
            regulation of cell-matrix adhesion" evidence=ISO] [GO:0002686
            "negative regulation of leukocyte migration" evidence=ISO]
            [GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0008134 "transcription factor binding" evidence=ISO]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
            evidence=ISO] [GO:0045617 "negative regulation of keratinocyte
            differentiation" evidence=ISO] [GO:0045656 "negative regulation of
            monocyte differentiation" evidence=ISO] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=ISO]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IDA] [GO:0048704 "embryonic
            skeletal system morphogenesis" evidence=IGI] [GO:0048863 "stem cell
            differentiation" evidence=IDA] InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 MGI:MGI:96179
            GO:GO:0005634 GO:GO:0009952 GO:GO:0003677 GO:GO:0043565
            GO:GO:0045944 GO:GO:0048863 GO:GO:0002686 GO:GO:0003700
            GO:GO:0006351 GO:GO:0001525 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 HOGENOM:HOG000231181
            GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0001953
            GO:GO:0048704 eggNOG:NOG238660 HOVERGEN:HBG016849 CTD:3204
            KO:K09307 OrthoDB:EOG4W9J4Z OMA:EHKDEGP GO:GO:0045617 GO:GO:0045656
            EMBL:M17192 EMBL:U15972 EMBL:AK033500 EMBL:BC131978 EMBL:BC132643
            IPI:IPI00113735 PIR:A03314 PIR:A28329 RefSeq:NP_034585.1
            UniGene:Mm.294826 ProteinModelPortal:P02830 SMR:P02830
            IntAct:P02830 MINT:MINT-1172633 STRING:P02830 PRIDE:P02830
            Ensembl:ENSMUST00000048715 GeneID:15404 KEGG:mmu:15404
            UCSC:uc009byj.1 InParanoid:A2RS54 NextBio:288110 Bgee:P02830
            CleanEx:MM_HOXA7 Genevestigator:P02830
            GermOnline:ENSMUSG00000038236 Uniprot:P02830
        Length = 229

 Score = 115 (45.5 bits), Expect = 0.00013, P = 0.00013
 Identities = 23/64 (35%), Positives = 33/64 (51%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKAN 127
             Q   LEK F     L   R++++A  L L  RQ+ +WFQNRR +WK +  +       A 
Sbjct:   140 QTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKDESQAPTAAP 199

Query:   128 YDAL 131
              DA+
Sbjct:   200 EDAV 203


>UNIPROTKB|E1BNQ7 [details] [associations]
            symbol:NKX6-1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048709
            "oligodendrocyte differentiation" evidence=IEA] [GO:0045687
            "positive regulation of glial cell differentiation" evidence=IEA]
            [GO:0045686 "negative regulation of glial cell differentiation"
            evidence=IEA] [GO:0045666 "positive regulation of neuron
            differentiation" evidence=IEA] [GO:0031018 "endocrine pancreas
            development" evidence=IEA] [GO:0021913 "regulation of transcription
            from RNA polymerase II promoter involved in ventral spinal cord
            interneuron specification" evidence=IEA] [GO:0021912 "regulation of
            transcription from RNA polymerase II promoter involved in spinal
            cord motor neuron fate specification" evidence=IEA] [GO:0007224
            "smoothened signaling pathway" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0045666
            GO:GO:0031018 GO:GO:0000976 GO:GO:0007224 GO:GO:0048709
            GeneTree:ENSGT00680000099625 GO:GO:0021913 GO:GO:0045687
            GO:GO:0045686 CTD:4825 KO:K08030 OMA:TPLYPAY GO:GO:0021912
            EMBL:DAAA02018306 IPI:IPI00696939 RefSeq:NP_001193167.1
            UniGene:Bt.112406 Ensembl:ENSBTAT00000003266 GeneID:616211
            KEGG:bta:616211 NextBio:20900018 Uniprot:E1BNQ7
        Length = 366

 Score = 119 (46.9 bits), Expect = 0.00013, P = 0.00013
 Identities = 24/51 (47%), Positives = 30/51 (58%)

Query:    65 SVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTK 115
             S  Q+ ALEK FE    L    + +LA  LG+   QV VWFQNRR +W+ K
Sbjct:   242 SGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKK 292


>UNIPROTKB|P78426 [details] [associations]
            symbol:NKX6-1 "Homeobox protein Nkx-6.1" species:9606 "Homo
            sapiens" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003682 "chromatin
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006366
            "transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0007224 "smoothened signaling pathway" evidence=IEA]
            [GO:0008283 "cell proliferation" evidence=IEA] [GO:0021912
            "regulation of transcription from RNA polymerase II promoter
            involved in spinal cord motor neuron fate specification"
            evidence=IEA] [GO:0021913 "regulation of transcription from RNA
            polymerase II promoter involved in ventral spinal cord interneuron
            specification" evidence=IEA] [GO:0032024 "positive regulation of
            insulin secretion" evidence=IEA] [GO:0035094 "response to nicotine"
            evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
            [GO:0045666 "positive regulation of neuron differentiation"
            evidence=IEA] [GO:0045686 "negative regulation of glial cell
            differentiation" evidence=IEA] [GO:0045687 "positive regulation of
            glial cell differentiation" evidence=IEA] [GO:0048709
            "oligodendrocyte differentiation" evidence=IEA] [GO:0071345
            "cellular response to cytokine stimulus" evidence=IEA] [GO:0071375
            "cellular response to peptide hormone stimulus" evidence=IEA]
            [GO:0009887 "organ morphogenesis" evidence=TAS] [GO:0031018
            "endocrine pancreas development" evidence=TAS] [GO:2000078
            "positive regulation of type B pancreatic cell development"
            evidence=ISS] [GO:0072560 "type B pancreatic cell maturation"
            evidence=ISS] [GO:0051594 "detection of glucose" evidence=ISS]
            [GO:0051091 "positive regulation of sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0031016 "pancreas
            development" evidence=ISS] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=ISS] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 Reactome:REACT_111045
            GO:GO:0051091 GO:GO:0042493 GO:GO:0008283 GO:GO:0045944
            GO:GO:0032024 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0000122 GO:GO:0009887 GO:GO:0035094 GO:GO:0045666
            GO:GO:0000976 GO:GO:0071375 GO:GO:0007224 GO:GO:0048709
            GO:GO:2000078 GO:GO:0071345 GO:GO:0021913 GO:GO:0051594
            GO:GO:0045687 GO:GO:0045686 EMBL:U66799 EMBL:U66797 EMBL:U66798
            EMBL:AC096766 IPI:IPI00019774 RefSeq:NP_006159.2 UniGene:Hs.546270
            ProteinModelPortal:P78426 SMR:P78426 STRING:P78426
            PhosphoSite:P78426 DMDM:288558819 PRIDE:P78426 DNASU:4825
            Ensembl:ENST00000295886 GeneID:4825 KEGG:hsa:4825 UCSC:uc003hpa.1
            CTD:4825 GeneCards:GC04M085339 HGNC:HGNC:7839 HPA:HPA036774
            MIM:602563 neXtProt:NX_P78426 PharmGKB:PA31646 eggNOG:NOG265304
            HOGENOM:HOG000060127 HOVERGEN:HBG070987 InParanoid:P78426 KO:K08030
            OMA:TPLYPAY OrthoDB:EOG4JT064 PhylomeDB:P78426 GenomeRNAi:4825
            NextBio:18584 ArrayExpress:P78426 Bgee:P78426 CleanEx:HS_NKX6-1
            Genevestigator:P78426 GermOnline:ENSG00000163623 GO:GO:0021912
            GO:GO:0072560 Uniprot:P78426
        Length = 367

 Score = 119 (46.9 bits), Expect = 0.00013, P = 0.00013
 Identities = 24/51 (47%), Positives = 30/51 (58%)

Query:    65 SVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTK 115
             S  Q+ ALEK FE    L    + +LA  LG+   QV VWFQNRR +W+ K
Sbjct:   244 SGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKK 294


>UNIPROTKB|F6ZYW8 [details] [associations]
            symbol:LOC100412294 "Uncharacterized protein" species:9483
            "Callithrix jacchus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=ISS] [GO:0000988 "protein
            binding transcription factor activity" evidence=ISS] [GO:0001047
            "core promoter binding" evidence=ISS] [GO:0001934 "positive
            regulation of protein phosphorylation" evidence=ISS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISS] [GO:0004882 "androgen receptor activity"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006919
            "activation of cysteine-type endopeptidase activity involved in
            apoptotic process" evidence=ISS] [GO:0007431 "salivary gland
            development" evidence=ISS] [GO:0008284 "positive regulation of cell
            proliferation" evidence=ISS] [GO:0008285 "negative regulation of
            cell proliferation" evidence=ISS] [GO:0010628 "positive regulation
            of gene expression" evidence=ISS] [GO:0010942 "positive regulation
            of cell death" evidence=ISS] [GO:0014068 "positive regulation of
            phosphatidylinositol 3-kinase cascade" evidence=ISS] [GO:0030284
            "estrogen receptor activity" evidence=ISS] [GO:0030295 "protein
            kinase activator activity" evidence=ISS] [GO:0030331 "estrogen
            receptor binding" evidence=ISS] [GO:0030521 "androgen receptor
            signaling pathway" evidence=ISS] [GO:0033574 "response to
            testosterone stimulus" evidence=ISS] [GO:0043280 "positive
            regulation of cysteine-type endopeptidase activity involved in
            apoptotic process" evidence=ISS] [GO:0043491 "protein kinase B
            signaling cascade" evidence=ISS] [GO:0043569 "negative regulation
            of insulin-like growth factor receptor signaling pathway"
            evidence=ISS] [GO:0043621 "protein self-association" evidence=ISS]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=ISS] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0045931 "positive regulation of
            mitotic cell cycle" evidence=ISS] [GO:0045944 "positive regulation
            of transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0048754 "branching morphogenesis of an epithelial tube"
            evidence=ISS] [GO:0050680 "negative regulation of epithelial cell
            proliferation" evidence=ISS] [GO:0051781 "positive regulation of
            cell division" evidence=ISS] [GO:0060442 "branching involved in
            prostate gland morphogenesis" evidence=ISS] [GO:0060664 "epithelial
            cell proliferation involved in salivary gland morphogenesis"
            evidence=ISS] [GO:0060770 "negative regulation of epithelial cell
            proliferation involved in prostate gland development" evidence=ISS]
            [GO:0071383 "cellular response to steroid hormone stimulus"
            evidence=ISS] [GO:0071899 "negative regulation of estrogen receptor
            binding" evidence=ISS] [GO:2000836 "positive regulation of androgen
            secretion" evidence=ISS] [GO:2001022 "positive regulation of
            response to DNA damage stimulus" evidence=ISS] [GO:2001244
            "positive regulation of intrinsic apoptotic signaling pathway"
            evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0045892 GO:GO:0045931
            GO:GO:0008284 GO:GO:0051781 GO:GO:0045944 GO:GO:0014068
            GO:GO:0030295 GO:GO:0043621 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0006919 GO:GO:0010942
            GO:GO:0033574 GO:GO:0001047 GO:GO:0043491 GO:GO:0000976
            GO:GO:0004882 GO:GO:0030331 GO:GO:0060770 GO:GO:2001244
            GO:GO:0043569 GO:GO:0048754 GeneTree:ENSGT00700000104206
            GO:GO:2001022 GO:GO:0060442 GO:GO:0000988 GO:GO:0030284
            GO:GO:0060664 GO:GO:0071899 GO:GO:2000836 EMBL:ACFV01082154
            Ensembl:ENSCJAT00000039452 Uniprot:F6ZYW8
        Length = 230

 Score = 115 (45.5 bits), Expect = 0.00013, P = 0.00013
 Identities = 31/78 (39%), Positives = 42/78 (53%)

Query:    59 EKKRR--LSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQ 116
             +K+ R   S  QV  LE+ F  +  L    +  LA+ L L   QV +WFQNRR + K KQ
Sbjct:   120 QKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTKRKQ 179

Query:   117 LERDYGVL--KANYDALK 132
             L  + G L  +A+  ALK
Sbjct:   180 LSSELGDLEKRASSSALK 197


>UNIPROTKB|D6RAR5 [details] [associations]
            symbol:D6RAR5 "Uncharacterized protein" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AC004080
            HOGENOM:HOG000294138 IPI:IPI00382764 ProteinModelPortal:D6RAR5
            SMR:D6RAR5 Ensembl:ENST00000470747 Uniprot:D6RAR5
        Length = 112

 Score = 98 (39.6 bits), Expect = 0.00013, P = 0.00013
 Identities = 25/65 (38%), Positives = 37/65 (56%)

Query:    58 SEKKRRL--SVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTK 115
             S +K+R   +  Q   LEK F     L  +R+ ++A+ L L  RQV +WFQNRR   K K
Sbjct:    45 STRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRM--KMK 102

Query:   116 QLERD 120
             ++ +D
Sbjct:   103 KINKD 107


>WB|WBGene00000439 [details] [associations]
            symbol:ceh-16 species:6239 "Caenorhabditis elegans"
            [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA;IDA] [GO:0000976
            "transcription regulatory region sequence-specific DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0040015 "negative regulation of multicellular organism growth"
            evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0009792
            "embryo development ending in birth or egg hatching" evidence=IMP]
            [GO:0009957 "epidermal cell fate specification" evidence=IMP]
            [GO:0010172 "embryonic body morphogenesis" evidence=IMP]
            [GO:0045026 "plasma membrane fusion" evidence=IGI;IMP] [GO:0048859
            "formation of anatomical boundary" evidence=IMP] [GO:0000122
            "negative regulation of transcription from RNA polymerase II
            promoter" evidence=IMP] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IMP]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009792
            GO:GO:0043565 GO:GO:0045944 GO:GO:0040011 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0000122 GO:GO:0040015 GO:GO:0000976 GO:GO:0010172
            GO:GO:0009957 GO:GO:0048859 GeneTree:ENSGT00680000099870
            EMBL:AY647457 EMBL:FO080380 PIR:S44752 PIR:T15488
            RefSeq:NP_498898.2 UniGene:Cel.25260 ProteinModelPortal:P34326
            SMR:P34326 STRING:P34326 EnsemblMetazoa:C13G5.1.1
            EnsemblMetazoa:C13G5.1.2 GeneID:191618 KEGG:cel:CELE_C13G5.1
            UCSC:C13G5.1 CTD:191618 WormBase:C13G5.1 eggNOG:NOG306728
            HOGENOM:HOG000022417 InParanoid:P34326 OMA:PTFASPN NextBio:949698
            GO:GO:0045026 PROSITE:PS00033 Uniprot:P34326
        Length = 187

 Score = 112 (44.5 bits), Expect = 0.00013, P = 0.00013
 Identities = 26/66 (39%), Positives = 38/66 (57%)

Query:    59 EKKRRLSV--DQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK--T 114
             EK+ R +   DQ+  L+  F     L  +R+ +LA ELGL   Q+ +WFQN+RA+ K  T
Sbjct:    87 EKRPRTAFTGDQLDRLKTEFRESRYLTEKRRQELAHELGLNESQIKIWFQNKRAKLKKST 146

Query:   115 KQLERD 120
               + RD
Sbjct:   147 SSVPRD 152


>WB|WBGene00000584 [details] [associations]
            symbol:cog-1 species:6239 "Caenorhabditis elegans"
            [GO:0000976 "transcription regulatory region sequence-specific DNA
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0000003 "reproduction"
            evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0008406
            "gonad development" evidence=IMP] [GO:0007389 "pattern
            specification process" evidence=IMP] [GO:0007368 "determination of
            left/right symmetry" evidence=IMP] [GO:0070491 "repressing
            transcription factor binding" evidence=IPI] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0018991
            GO:GO:0008406 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0007368
            GeneTree:ENSGT00680000099625 HSSP:P13297 EMBL:Z82279 EMBL:AY151209
            PIR:T23866 RefSeq:NP_001022264.1 UniGene:Cel.20704
            ProteinModelPortal:G5EGE2 SMR:G5EGE2 IntAct:G5EGE2
            EnsemblMetazoa:R03C1.3a GeneID:175149 KEGG:cel:CELE_R03C1.3
            CTD:175149 WormBase:R03C1.3a OMA:ASGDKSP NextBio:886968
            Uniprot:G5EGE2
        Length = 256

 Score = 116 (45.9 bits), Expect = 0.00013, P = 0.00013
 Identities = 22/49 (44%), Positives = 30/49 (61%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQ 116
             Q+  LE+ FE    L    + +LAQEL +   QV VWFQNRR +W+ K+
Sbjct:   180 QIYQLERKFEQTKYLAGADRAQLAQELNMSESQVKVWFQNRRTKWRKKE 228


>UNIPROTKB|H0YJ33 [details] [associations]
            symbol:CDX2 "Homeobox protein CDX-2" species:9606 "Homo
            sapiens" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0000976 EMBL:AL591024 HGNC:HGNC:1806 Ensembl:ENST00000548877
            Uniprot:H0YJ33
        Length = 156

 Score = 107 (42.7 bits), Expect = 0.00014, P = 0.00014
 Identities = 24/54 (44%), Positives = 31/54 (57%)

Query:    59 EKKRRLSVDQVKA-LEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRAR 111
             +K R +  D  +  LEK F     +   RK +LA  LGL  RQV +WFQNRRA+
Sbjct:    30 DKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAK 83


>WB|WBGene00000452 [details] [associations]
            symbol:ceh-31 species:6239 "Caenorhabditis elegans"
            [GO:0000976 "transcription regulatory region sequence-specific DNA
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0000976 eggNOG:NOG263484 EMBL:FO080757
            GeneTree:ENSGT00700000104454 HOGENOM:HOG000020180 PIR:T25611
            RefSeq:NP_508525.3 ProteinModelPortal:Q22910 SMR:Q22910
            PaxDb:Q22910 EnsemblMetazoa:C33D12.1 GeneID:191621
            KEGG:cel:CELE_C33D12.1 UCSC:C33D12.1 CTD:191621 WormBase:C33D12.1
            InParanoid:Q22910 OMA:MELAHRM NextBio:949710 Uniprot:Q22910
        Length = 260

 Score = 116 (45.9 bits), Expect = 0.00014, P = 0.00014
 Identities = 28/83 (33%), Positives = 43/83 (51%)

Query:    58 SEKKRRLSVD-QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTK- 115
             + K R +  D Q++ LE  FE +  L  + +++LA  +GL   QV  W+QNRR +WK + 
Sbjct:    94 ARKARTIFTDKQLQELENTFEKQKYLSVQDRMELAHRMGLTDTQVKTWYQNRRTKWKRQA 153

Query:   116 ----QLERDYGVLKANYDALKLN 134
                  L  D G + A    L+ N
Sbjct:   154 SVGMDLLHDAGNMAAVQQLLRTN 176


>WB|WBGene00000451 [details] [associations]
            symbol:ceh-30 species:6239 "Caenorhabditis elegans"
            [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0000976 "transcription
            regulatory region sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0043066 GO:GO:0007399 GO:GO:0030154 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0000976 GO:GO:0007548 eggNOG:NOG263484
            EMBL:FO080757 PIR:T25610 RefSeq:NP_508524.2
            ProteinModelPortal:Q22909 SMR:Q22909 STRING:Q22909 PaxDb:Q22909
            PRIDE:Q22909 EnsemblMetazoa:C33D12.7 GeneID:191620
            KEGG:cel:CELE_C33D12.7 UCSC:C33D12.7 CTD:191620 WormBase:C33D12.7
            GeneTree:ENSGT00700000104454 HOGENOM:HOG000020180 InParanoid:Q22909
            OMA:MDLAHRM NextBio:949706 Uniprot:Q22909
        Length = 237

 Score = 115 (45.5 bits), Expect = 0.00014, P = 0.00014
 Identities = 23/57 (40%), Positives = 33/57 (57%)

Query:    58 SEKKRRLSVD-QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 113
             S K R +  D Q++ LE  FE +  L  + ++ LA  +GL   QV  W+QNRR +WK
Sbjct:    95 SRKARTIFTDKQLQELENTFEKQKYLSVQDRMDLAHRMGLTDTQVKTWYQNRRTKWK 151


>UNIPROTKB|Q22909 [details] [associations]
            symbol:ceh-30 "Homeobox protein ceh-30" species:6239
            "Caenorhabditis elegans" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0043066 "negative regulation of apoptotic process"
            evidence=IMP] [GO:0007548 "sex differentiation" evidence=IMP]
            [GO:0007399 "nervous system development" evidence=IMP] [GO:0005634
            "nucleus" evidence=IDA] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0043066 GO:GO:0007399 GO:GO:0030154 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0000976 GO:GO:0007548 eggNOG:NOG263484
            EMBL:FO080757 PIR:T25610 RefSeq:NP_508524.2
            ProteinModelPortal:Q22909 SMR:Q22909 STRING:Q22909 PaxDb:Q22909
            PRIDE:Q22909 EnsemblMetazoa:C33D12.7 GeneID:191620
            KEGG:cel:CELE_C33D12.7 UCSC:C33D12.7 CTD:191620 WormBase:C33D12.7
            GeneTree:ENSGT00700000104454 HOGENOM:HOG000020180 InParanoid:Q22909
            OMA:MDLAHRM NextBio:949706 Uniprot:Q22909
        Length = 237

 Score = 115 (45.5 bits), Expect = 0.00014, P = 0.00014
 Identities = 23/57 (40%), Positives = 33/57 (57%)

Query:    58 SEKKRRLSVD-QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 113
             S K R +  D Q++ LE  FE +  L  + ++ LA  +GL   QV  W+QNRR +WK
Sbjct:    95 SRKARTIFTDKQLQELENTFEKQKYLSVQDRMDLAHRMGLTDTQVKTWYQNRRTKWK 151


>UNIPROTKB|O93367 [details] [associations]
            symbol:TLX3 "T-cell leukemia homeobox protein 3"
            species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
            [GO:0002087 "regulation of respiratory gaseous exchange by
            neurological system process" evidence=IEA] [GO:0007417 "central
            nervous system development" evidence=IEA] [GO:0007585 "respiratory
            gaseous exchange" evidence=IEA] [GO:0045665 "negative regulation of
            neuron differentiation" evidence=IEA] [GO:0048665 "neuron fate
            specification" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 eggNOG:NOG314631 HOGENOM:HOG000116280
            HOVERGEN:HBG036206 OrthoDB:EOG4QJRP8 EMBL:AF071875 IPI:IPI00572018
            RefSeq:NP_990345.1 UniGene:Gga.45972 ProteinModelPortal:O93367
            GeneID:395867 KEGG:gga:395867 CTD:30012 InParanoid:O93367 KO:K15607
            NextBio:20815934 ArrayExpress:O93367 Uniprot:O93367
        Length = 297

 Score = 117 (46.2 bits), Expect = 0.00015, P = 0.00015
 Identities = 31/90 (34%), Positives = 48/90 (53%)

Query:    60 KKRRLSVDQVKA--LEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQL 117
             KK R S  +V+   LEK F  +  L    +  LA+ L +   QV  WFQNRR +W+ +  
Sbjct:   173 KKPRTSFSRVQICELEKRFHRQKYLASAERAALAKSLKMTDAQVKTWFQNRRTKWRRQTA 232

Query:   118 E-RDYGVLKANYDALKLNYDSLQHD-NEAL 145
             E R+    +A+   L+L +D+ Q   NE++
Sbjct:   233 EEREAERQQASRLMLQLQHDAFQKSLNESI 262


>UNIPROTKB|F1LWY9 [details] [associations]
            symbol:F1LWY9 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
            GO:GO:0048705 GeneTree:ENSGT00700000104332 IPI:IPI00957183
            Ensembl:ENSRNOT00000067861 Uniprot:F1LWY9
        Length = 181

 Score = 111 (44.1 bits), Expect = 0.00015, P = 0.00015
 Identities = 23/53 (43%), Positives = 32/53 (60%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERD 120
             Q   LEK F     L  +R+++++  L L  RQV +WFQNRR +WK K+  RD
Sbjct:    99 QTLELEKEFLFNPYLTRKRRIEVSHTLALTERQVKIWFQNRRMKWK-KENNRD 150


>ZFIN|ZDB-GENE-990415-75 [details] [associations]
            symbol:flh "floating head" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0030325 "adrenal gland
            development" evidence=IMP] [GO:0048319 "axial mesoderm
            morphogenesis" evidence=IGI;IMP] [GO:0061371 "determination of
            heart left/right asymmetry" evidence=IMP] [GO:0021982 "pineal gland
            development" evidence=IMP] [GO:0035050 "embryonic heart tube
            development" evidence=IMP] [GO:0003143 "embryonic heart tube
            morphogenesis" evidence=IMP] [GO:2000223 "regulation of BMP
            signaling pathway involved in heart jogging" evidence=IMP]
            [GO:0014028 "notochord formation" evidence=IMP] [GO:0001947 "heart
            looping" evidence=IMP] [GO:0007368 "determination of left/right
            symmetry" evidence=IMP] [GO:0032835 "glomerulus development"
            evidence=IMP] [GO:0003160 "endocardium morphogenesis" evidence=IMP]
            [GO:0003140 "determination of left/right asymmetry in lateral
            mesoderm" evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 ZFIN:ZDB-GENE-990415-75 GO:GO:0005634 GO:GO:0030325
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
            KO:K09311 GO:GO:0001947 GO:GO:0032835 GO:GO:0003160 HSSP:P06602
            GO:GO:0003140 GO:GO:2000223 GO:GO:0014028 GO:GO:0048319 EMBL:L48017
            EMBL:BC162344 EMBL:AY214391 IPI:IPI00485170 PIR:S60249
            RefSeq:NP_571130.1 UniGene:Dr.352 STRING:Q90461 GeneID:30260
            KEGG:dre:30260 CTD:30260 HOVERGEN:HBG098267 InParanoid:Q90461
            NextBio:20806708 GO:GO:0021982 Uniprot:Q90461
        Length = 241

 Score = 115 (45.5 bits), Expect = 0.00015, P = 0.00015
 Identities = 27/73 (36%), Positives = 37/73 (50%)

Query:    56 HVSEKKRRLSV----DQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRAR 111
             H S K +R+      DQ+  LEK F  +  +    +  LA  L L   QV VWFQNRR +
Sbjct:   129 HKSGKSKRMRTSFTNDQLSRLEKEFARQQYMVGSERFLLASALQLTEAQVKVWFQNRRIK 188

Query:   112 WKTKQLERDYGVL 124
             W+ + LE+    L
Sbjct:   189 WRKQSLEQQQAKL 201


>UNIPROTKB|F1NM26 [details] [associations]
            symbol:MEOX2 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0001525 "angiogenesis" evidence=IEA] [GO:0001757 "somite
            specification" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0007519 "skeletal muscle tissue development" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0060021 "palate development" evidence=IEA] [GO:0060173 "limb
            development" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GeneTree:ENSGT00660000095141 OMA:DHTLFGC
            EMBL:AADN02000860 EMBL:AADN02000861 EMBL:AADN02000862
            EMBL:AADN02000863 EMBL:AADN02000864 IPI:IPI00604288
            Ensembl:ENSGALT00000017555 ArrayExpress:F1NM26 Uniprot:F1NM26
        Length = 302

 Score = 117 (46.2 bits), Expect = 0.00015, P = 0.00015
 Identities = 34/116 (29%), Positives = 49/116 (42%)

Query:     5 LCSSDDSLGALM---SICPATDEQSPRNNQVYSREFQTMXXXXXXXXXXXXXXXHVSEKK 61
             LCS+  SLG      + C   D      + V + +                    V+ K 
Sbjct:   126 LCSNSSSLGTTTPTGAACAPGDYGRQALSPVETEKRSGKRKSDSSDSQEGNYKSEVNSKP 185

Query:    62 RR----LSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 113
             R+     + +Q++ LE  F   N L   R+ ++A  L L  RQV VWFQNRR +WK
Sbjct:   186 RKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWK 241


>UNIPROTKB|E1BHR6 [details] [associations]
            symbol:HOXC5 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048706 "embryonic
            skeletal system development" evidence=IEA] [GO:0030054 "cell
            junction" evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0009952 GO:GO:0030054 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0048706 GeneTree:ENSGT00700000104161 KO:K09305 CTD:3222
            OMA:CYSGLDL EMBL:DAAA02012839 IPI:IPI00694608 RefSeq:NP_001178280.1
            UniGene:Bt.93629 Ensembl:ENSBTAT00000012696 GeneID:100140629
            KEGG:bta:100140629 NextBio:20790992 Uniprot:E1BHR6
        Length = 222

 Score = 114 (45.2 bits), Expect = 0.00015, P = 0.00015
 Identities = 25/61 (40%), Positives = 34/61 (55%)

Query:    56 HVSEKKR-RLSVD--QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARW 112
             H ++ KR R S    Q   LEK F     L   R++++A  L L  RQ+ +WFQNRR +W
Sbjct:   151 HETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKW 210

Query:   113 K 113
             K
Sbjct:   211 K 211


>UNIPROTKB|J9P833 [details] [associations]
            symbol:HOXC5 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104161
            OMA:CYSGLDL EMBL:AAEX03014973 ProteinModelPortal:J9P833
            Ensembl:ENSCAFT00000049441 Uniprot:J9P833
        Length = 222

 Score = 114 (45.2 bits), Expect = 0.00015, P = 0.00015
 Identities = 25/61 (40%), Positives = 34/61 (55%)

Query:    56 HVSEKKR-RLSVD--QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARW 112
             H ++ KR R S    Q   LEK F     L   R++++A  L L  RQ+ +WFQNRR +W
Sbjct:   151 HETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKW 210

Query:   113 K 113
             K
Sbjct:   211 K 211


>UNIPROTKB|I3LRP3 [details] [associations]
            symbol:LOC100627840 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048706
            "embryonic skeletal system development" evidence=IEA] [GO:0030054
            "cell junction" evidence=IEA] [GO:0009952 "anterior/posterior
            pattern specification" evidence=IEA] [GO:0043565 "sequence-specific
            DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104161 KO:K09305 OMA:CYSGLDL EMBL:CU633419
            EMBL:FP579005 RefSeq:XP_003126250.1 RefSeq:XP_003355471.1
            SMR:I3LRP3 Ensembl:ENSSSCT00000028782 Ensembl:ENSSSCT00000031368
            GeneID:100152707 GeneID:100627840 KEGG:ssc:100152707
            KEGG:ssc:100627840 Uniprot:I3LRP3
        Length = 222

 Score = 114 (45.2 bits), Expect = 0.00015, P = 0.00015
 Identities = 25/61 (40%), Positives = 34/61 (55%)

Query:    56 HVSEKKR-RLSVD--QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARW 112
             H ++ KR R S    Q   LEK F     L   R++++A  L L  RQ+ +WFQNRR +W
Sbjct:   151 HETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKW 210

Query:   113 K 113
             K
Sbjct:   211 K 211


>MGI|MGI:96196 [details] [associations]
            symbol:Hoxc5 "homeobox C5" species:10090 "Mus musculus"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0048706 "embryonic skeletal system development"
            evidence=IGI] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 MGI:MGI:96196 GO:GO:0005634
            GO:GO:0009952 GO:GO:0030054 GO:GO:0043565 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0048706 GeneTree:ENSGT00700000104161
            HOVERGEN:HBG016849 HOGENOM:HOG000231178 KO:K09305 CTD:3222
            eggNOG:NOG286013 OMA:CYSGLDL OrthoDB:EOG4CRM16 EMBL:U28071
            EMBL:AK078527 EMBL:BC115551 EMBL:BC115552 IPI:IPI00134225
            PIR:A60084 RefSeq:NP_783857.1 UniGene:Mm.103825
            ProteinModelPortal:P32043 SMR:P32043 STRING:P32043
            PhosphoSite:P32043 PRIDE:P32043 Ensembl:ENSMUST00000001709
            GeneID:15424 KEGG:mmu:15424 UCSC:uc007xxe.1 InParanoid:P32043
            NextBio:288170 Bgee:P32043 CleanEx:MM_HOXC5 Genevestigator:P32043
            GermOnline:ENSMUSG00000022485 Uniprot:P32043
        Length = 222

 Score = 114 (45.2 bits), Expect = 0.00015, P = 0.00015
 Identities = 25/61 (40%), Positives = 34/61 (55%)

Query:    56 HVSEKKR-RLSVD--QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARW 112
             H ++ KR R S    Q   LEK F     L   R++++A  L L  RQ+ +WFQNRR +W
Sbjct:   151 HETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKW 210

Query:   113 K 113
             K
Sbjct:   211 K 211


>RGD|1307584 [details] [associations]
            symbol:Hoxc5 "homeo box C5" species:10116 "Rattus norvegicus"
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IEA;ISO] [GO:0030054 "cell junction" evidence=IEA;ISO]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0048706 "embryonic skeletal system development"
            evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            RGD:1307584 GO:GO:0005634 GO:GO:0009952 GO:GO:0030054 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0048706 EMBL:CH474035
            GeneTree:ENSGT00700000104161 KO:K09305 CTD:3222 OMA:CYSGLDL
            OrthoDB:EOG4CRM16 EMBL:AC116663 IPI:IPI00210372
            RefSeq:NP_001101586.1 UniGene:Rn.152771 SMR:D3ZP88
            Ensembl:ENSRNOT00000022247 GeneID:315341 KEGG:rno:315341
            NextBio:669109 Uniprot:D3ZP88
        Length = 222

 Score = 114 (45.2 bits), Expect = 0.00015, P = 0.00015
 Identities = 25/61 (40%), Positives = 34/61 (55%)

Query:    56 HVSEKKR-RLSVD--QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARW 112
             H ++ KR R S    Q   LEK F     L   R++++A  L L  RQ+ +WFQNRR +W
Sbjct:   151 HETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKW 210

Query:   113 K 113
             K
Sbjct:   211 K 211


>UNIPROTKB|F1SEJ3 [details] [associations]
            symbol:MEOX2 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060173 "limb
            development" evidence=IEA] [GO:0060021 "palate development"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0001757
            "somite specification" evidence=IEA] [GO:0001525 "angiogenesis"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
            GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
            GO:GO:0060173 GO:GO:0007519 GO:GO:0001757
            GeneTree:ENSGT00660000095141 KO:K09322 OMA:DHTLFGC EMBL:FP565218
            RefSeq:XP_003482725.1 Ensembl:ENSSSCT00000016732 GeneID:100736898
            KEGG:ssc:100736898 Uniprot:F1SEJ3
        Length = 303

 Score = 117 (46.2 bits), Expect = 0.00015, P = 0.00015
 Identities = 37/117 (31%), Positives = 51/117 (43%)

Query:     5 LCSSDDSLGALM---SICPATD--EQ--SPRNNQVYSREFQTMXXXXXXXXXXXXXXXHV 57
             LCS+  SLG+     + CP  D   Q  SP   +  S   +                   
Sbjct:   126 LCSNSSSLGSSTPTGAACPPGDYGRQALSPAEAEKRSGGKRKSDSSDSQEGNYKSEVNSK 185

Query:    58 SEKKRR-LSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 113
               K+R   + +Q++ LE  F   N L   R+ ++A  L L  RQV VWFQNRR +WK
Sbjct:   186 PRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWK 242


>UNIPROTKB|Q9W6D8 [details] [associations]
            symbol:BARX1 "Homeobox protein BarH-like 1" species:9031
            "Gallus gallus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0000976 EMBL:AF116460 IPI:IPI00600643
            UniGene:Gga.44 ProteinModelPortal:Q9W6D8 SMR:Q9W6D8
            HOVERGEN:HBG050665 Uniprot:Q9W6D8
        Length = 207

 Score = 113 (44.8 bits), Expect = 0.00016, P = 0.00016
 Identities = 21/46 (45%), Positives = 28/46 (60%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 113
             Q+  LEK FE +  L    ++ LA+ LGL   QV  W+QNRR +WK
Sbjct:   106 QLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWK 151


>ZFIN|ZDB-GENE-990415-105 [details] [associations]
            symbol:hoxb4a "homeo box B4a" species:7955 "Danio
            rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            ZFIN:ZDB-GENE-990415-105 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
            eggNOG:NOG314883 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
            OrthoDB:EOG4GTKF7 EMBL:AL645782 EMBL:AF071252 EMBL:M24085
            EMBL:Y13946 IPI:IPI00499387 PIR:JT0489 RefSeq:NP_571193.1
            UniGene:Dr.133609 ProteinModelPortal:P22574 SMR:P22574
            Ensembl:ENSDART00000012470 GeneID:30340 KEGG:dre:30340 CTD:30340
            InParanoid:P22574 OMA:RSACNEQ NextBio:20806771 ArrayExpress:P22574
            Bgee:P22574 Uniprot:P22574
        Length = 246

 Score = 115 (45.5 bits), Expect = 0.00016, P = 0.00016
 Identities = 22/46 (47%), Positives = 28/46 (60%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 113
             QV  LEK F     L   R+V++A  L L  RQ+ +WFQNRR +WK
Sbjct:   162 QVLELEKEFHYNRYLTRRRRVEIAHTLCLSERQIKIWFQNRRMKWK 207


>MGI|MGI:96185 [details] [associations]
            symbol:Hoxb4 "homeobox B4" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IDA] [GO:0002011 "morphogenesis of
            an epithelial sheet" evidence=IGI] [GO:0003677 "DNA binding"
            evidence=IDA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0008283 "cell proliferation"
            evidence=IMP] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IGI] [GO:0030097 "hemopoiesis"
            evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=ISO] [GO:0048103 "somatic
            stem cell division" evidence=IDA] [GO:0048536 "spleen development"
            evidence=IMP] [GO:0048539 "bone marrow development" evidence=IMP]
            [GO:0048704 "embryonic skeletal system morphogenesis" evidence=IGI]
            [GO:0048705 "skeletal system morphogenesis" evidence=IGI;IMP]
            [GO:0060216 "definitive hemopoiesis" evidence=IGI] [GO:0060218
            "hematopoietic stem cell differentiation" evidence=ISO] [GO:2000738
            "positive regulation of stem cell differentiation" evidence=ISO]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            MGI:MGI:96185 GO:GO:0005634 GO:GO:0009952 GO:GO:0003677
            GO:GO:0008283 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0048536
            GO:GO:0048704 GO:GO:0048103 GO:GO:0060216 GO:GO:0002011
            eggNOG:NOG314883 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
            OrthoDB:EOG4GTKF7 CTD:3214 OMA:RYAACRD GO:GO:0048539 EMBL:M36654
            EMBL:AK133945 EMBL:BC095947 IPI:IPI00109338 PIR:A31757
            RefSeq:NP_034589.3 UniGene:Mm.3546 ProteinModelPortal:P10284
            SMR:P10284 IntAct:P10284 STRING:P10284 PhosphoSite:P10284
            PRIDE:P10284 Ensembl:ENSMUST00000049241 GeneID:15412 KEGG:mmu:15412
            InParanoid:P10284 NextBio:288134 Bgee:P10284 CleanEx:MM_HOXB4
            Genevestigator:P10284 GermOnline:ENSMUSG00000038692 Uniprot:P10284
        Length = 250

 Score = 115 (45.5 bits), Expect = 0.00017, P = 0.00017
 Identities = 22/46 (47%), Positives = 28/46 (60%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 113
             QV  LEK F     L   R+V++A  L L  RQ+ +WFQNRR +WK
Sbjct:   172 QVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWK 217


>RGD|1560113 [details] [associations]
            symbol:Hoxb4 "homeo box B4" species:10116 "Rattus norvegicus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA;ISO] [GO:0002011
            "morphogenesis of an epithelial sheet" evidence=IEA;ISO]
            [GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008283 "cell
            proliferation" evidence=IEA;ISO] [GO:0009952 "anterior/posterior
            pattern specification" evidence=IEA;ISO] [GO:0030097 "hemopoiesis"
            evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048103
            "somatic stem cell division" evidence=IEA;ISO] [GO:0048536 "spleen
            development" evidence=IEA;ISO] [GO:0048539 "bone marrow
            development" evidence=IEA;ISO] [GO:0048704 "embryonic skeletal
            system morphogenesis" evidence=IEA;ISO] [GO:0048705 "skeletal
            system morphogenesis" evidence=ISO] [GO:0060216 "definitive
            hemopoiesis" evidence=IEA;ISO] [GO:0060218 "hematopoietic stem cell
            differentiation" evidence=IEA;ISO] [GO:2000738 "positive regulation
            of stem cell differentiation" evidence=IEA;ISO] InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1560113
            GO:GO:0005634 GO:GO:0009952 GO:GO:0008283 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 GO:GO:0000122
            GO:GO:0048536 GO:GO:0048704 EMBL:CH473948 GO:GO:0048103
            GO:GO:0060216 GO:GO:0002011 eggNOG:NOG314883 KO:K09304
            HOGENOM:HOG000231179 HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7 CTD:3214
            OMA:RYAACRD GO:GO:0048539 EMBL:BC161863 IPI:IPI00199999
            RefSeq:NP_001094257.1 UniGene:Rn.209614 SMR:B1WBS2 STRING:B1WBS2
            Ensembl:ENSRNOT00000010965 GeneID:497988 KEGG:rno:497988
            NextBio:698314 Genevestigator:B1WBS2 Uniprot:B1WBS2
        Length = 250

 Score = 115 (45.5 bits), Expect = 0.00017, P = 0.00017
 Identities = 22/46 (47%), Positives = 28/46 (60%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 113
             QV  LEK F     L   R+V++A  L L  RQ+ +WFQNRR +WK
Sbjct:   172 QVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWK 217


>UNIPROTKB|F1N257 [details] [associations]
            symbol:HOXB4 "Homeobox protein Hox-B4" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:2000738 "positive
            regulation of stem cell differentiation" evidence=IEA] [GO:0060218
            "hematopoietic stem cell differentiation" evidence=IEA] [GO:0060216
            "definitive hemopoiesis" evidence=IEA] [GO:0048704 "embryonic
            skeletal system morphogenesis" evidence=IEA] [GO:0048539 "bone
            marrow development" evidence=IEA] [GO:0048536 "spleen development"
            evidence=IEA] [GO:0048103 "somatic stem cell division"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0008283 "cell proliferation" evidence=IEA] [GO:0002011
            "morphogenesis of an epithelial sheet" evidence=IEA] [GO:0000122
            "negative regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0009952 GO:GO:0008283 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0048536
            GO:GO:0048704 GO:GO:0048103 GO:GO:0060216 GO:GO:0002011
            IPI:IPI00713167 OMA:RYAACRD GO:GO:0048539 EMBL:DAAA02049065
            Ensembl:ENSBTAT00000043402 Uniprot:F1N257
        Length = 251

 Score = 115 (45.5 bits), Expect = 0.00017, P = 0.00017
 Identities = 22/46 (47%), Positives = 28/46 (60%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 113
             QV  LEK F     L   R+V++A  L L  RQ+ +WFQNRR +WK
Sbjct:   173 QVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWK 218


>UNIPROTKB|Q08DG5 [details] [associations]
            symbol:HOXB4 "Homeobox protein Hox-B4" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09304
            HOGENOM:HOG000231179 HOVERGEN:HBG016849 eggNOG:NOG305812
            EMBL:BC123761 IPI:IPI00713167 RefSeq:NP_001071582.1
            UniGene:Bt.46279 ProteinModelPortal:Q08DG5 SMR:Q08DG5 PRIDE:Q08DG5
            GeneID:768240 KEGG:bta:768240 CTD:3214 InParanoid:Q08DG5
            NextBio:20918537 Uniprot:Q08DG5
        Length = 251

 Score = 115 (45.5 bits), Expect = 0.00017, P = 0.00017
 Identities = 22/46 (47%), Positives = 28/46 (60%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 113
             QV  LEK F     L   R+V++A  L L  RQ+ +WFQNRR +WK
Sbjct:   173 QVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWK 218


>UNIPROTKB|F6UWC1 [details] [associations]
            symbol:HOXB4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
            OMA:RYAACRD EMBL:AAEX03006516 Ensembl:ENSCAFT00000026671
            EMBL:AAEX03006515 Uniprot:F6UWC1
        Length = 251

 Score = 115 (45.5 bits), Expect = 0.00017, P = 0.00017
 Identities = 22/46 (47%), Positives = 28/46 (60%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 113
             QV  LEK F     L   R+V++A  L L  RQ+ +WFQNRR +WK
Sbjct:   173 QVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWK 218


>UNIPROTKB|P17483 [details] [associations]
            symbol:HOXB4 "Homeobox protein Hox-B4" species:9606 "Homo
            sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0002011 "morphogenesis of
            an epithelial sheet" evidence=IEA] [GO:0008283 "cell proliferation"
            evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0048103 "somatic stem cell
            division" evidence=IEA] [GO:0048536 "spleen development"
            evidence=IEA] [GO:0048539 "bone marrow development" evidence=IEA]
            [GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
            [GO:0060216 "definitive hemopoiesis" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=NAS]
            [GO:0005634 "nucleus" evidence=NAS] [GO:0007275 "multicellular
            organismal development" evidence=NAS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=NAS] [GO:2000738 "positive regulation of stem cell
            differentiation" evidence=IDA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IDA]
            [GO:0060218 "hematopoietic stem cell differentiation" evidence=IDA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0009952 GO:GO:0008283 GO:GO:0043565
            GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
            GO:GO:0060218 GO:GO:0048536 GO:GO:0048704 GO:GO:0048103
            GO:GO:0060216 GO:GO:0002011 eggNOG:NOG314883 KO:K09304
            GO:GO:2000738 HOGENOM:HOG000231179 HOVERGEN:HBG016849
            OrthoDB:EOG4GTKF7 EMBL:AF287967 CTD:3214 EMBL:X16174 EMBL:AF307160
            EMBL:BC049204 EMBL:AL137449 IPI:IPI00014540 PIR:B60492 PIR:T46446
            RefSeq:NP_076920.1 UniGene:Hs.664706 ProteinModelPortal:P17483
            SMR:P17483 STRING:P17483 PhosphoSite:P17483 DMDM:547692
            PaxDb:P17483 PeptideAtlas:P17483 PRIDE:P17483
            Ensembl:ENST00000332503 GeneID:3214 KEGG:hsa:3214 UCSC:uc002inp.3
            GeneCards:GC17M046652 HGNC:HGNC:5115 MIM:142965 neXtProt:NX_P17483
            PharmGKB:PA29391 InParanoid:P17483 OMA:RYAACRD GenomeRNAi:3214
            NextBio:12788 Bgee:P17483 CleanEx:HS_HOXB4 Genevestigator:P17483
            GermOnline:ENSG00000182742 GO:GO:0048539 Uniprot:P17483
        Length = 251

 Score = 115 (45.5 bits), Expect = 0.00017, P = 0.00017
 Identities = 22/46 (47%), Positives = 28/46 (60%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 113
             QV  LEK F     L   R+V++A  L L  RQ+ +WFQNRR +WK
Sbjct:   173 QVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWK 218


>UNIPROTKB|F1RWG5 [details] [associations]
            symbol:HOXB4 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:2000738 "positive
            regulation of stem cell differentiation" evidence=IEA] [GO:0060218
            "hematopoietic stem cell differentiation" evidence=IEA] [GO:0060216
            "definitive hemopoiesis" evidence=IEA] [GO:0048704 "embryonic
            skeletal system morphogenesis" evidence=IEA] [GO:0048539 "bone
            marrow development" evidence=IEA] [GO:0048536 "spleen development"
            evidence=IEA] [GO:0048103 "somatic stem cell division"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0008283 "cell proliferation" evidence=IEA] [GO:0002011
            "morphogenesis of an epithelial sheet" evidence=IEA] [GO:0000122
            "negative regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0009952 GO:GO:0008283 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0048536
            GO:GO:0048704 GO:GO:0048103 GO:GO:0060216 GO:GO:0002011 KO:K09304
            OMA:RYAACRD GO:GO:0048539 EMBL:CU856160 RefSeq:XP_003131596.1
            Ensembl:ENSSSCT00000019089 GeneID:100522341 KEGG:ssc:100522341
            Uniprot:F1RWG5
        Length = 251

 Score = 115 (45.5 bits), Expect = 0.00017, P = 0.00017
 Identities = 22/46 (47%), Positives = 28/46 (60%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 113
             QV  LEK F     L   R+V++A  L L  RQ+ +WFQNRR +WK
Sbjct:   173 QVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWK 218


>UNIPROTKB|J9P7F8 [details] [associations]
            symbol:NOTO "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976
            GeneTree:ENSGT00680000099625 EMBL:AAEX03010974
            Ensembl:ENSCAFT00000046319 OMA:WAPAEEL Uniprot:J9P7F8
        Length = 123

 Score = 97 (39.2 bits), Expect = 0.00017, P = 0.00017
 Identities = 18/52 (34%), Positives = 33/52 (63%)

Query:    65 SVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQ 116
             ++ Q++ LE  F  ++ L  +++ +LA  L L   QV +WFQNRR +++ +Q
Sbjct:    37 NLKQLEELENVFTKQHNLVGKKRAQLAARLNLTENQVRIWFQNRRVKYQKQQ 88


>UNIPROTKB|F8VU08 [details] [associations]
            symbol:HHEX "Hematopoietically-expressed homeobox protein
            HHEX" species:9606 "Homo sapiens" [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0001570 "vasculogenesis"
            evidence=IEA] [GO:0001701 "in utero embryonic development"
            evidence=IEA] [GO:0002573 "myeloid leukocyte differentiation"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007165 "signal
            transduction" evidence=IEA] [GO:0007492 "endoderm development"
            evidence=IEA] [GO:0009611 "response to wounding" evidence=IEA]
            [GO:0016525 "negative regulation of angiogenesis" evidence=IEA]
            [GO:0022027 "interkinetic nuclear migration" evidence=IEA]
            [GO:0030177 "positive regulation of Wnt receptor signaling pathway"
            evidence=IEA] [GO:0030183 "B cell differentiation" evidence=IEA]
            [GO:0030878 "thyroid gland development" evidence=IEA] [GO:0030948
            "negative regulation of vascular endothelial growth factor receptor
            signaling pathway" evidence=IEA] [GO:0031016 "pancreas development"
            evidence=IEA] [GO:0035050 "embryonic heart tube development"
            evidence=IEA] [GO:0035264 "multicellular organism growth"
            evidence=IEA] [GO:0042127 "regulation of cell proliferation"
            evidence=IEA] [GO:0043434 "response to peptide hormone stimulus"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0048568 "embryonic organ development"
            evidence=IEA] [GO:0048853 "forebrain morphogenesis" evidence=IEA]
            [GO:0060431 "primary lung bud formation" evidence=IEA] [GO:0061009
            "common bile duct development" evidence=IEA] [GO:0061010 "gall
            bladder development" evidence=IEA] [GO:0061011 "hepatic duct
            development" evidence=IEA] [GO:0061017 "hepatoblast
            differentiation" evidence=IEA] [GO:0070365 "hepatocyte
            differentiation" evidence=IEA] [GO:0071837 "HMG box domain binding"
            evidence=IEA] [GO:0090009 "primitive streak formation"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071
            GO:GO:0005634 GO:GO:0005737 GO:GO:0007165 GO:GO:0009611
            GO:GO:0043565 GO:GO:0001701 GO:GO:0043434 GO:GO:0003700
            GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0042127
            GO:GO:0000122 GO:GO:0030183 GO:GO:0035264 GO:GO:0001570
            GO:GO:0016525 GO:GO:0031016 GO:GO:0007492 GO:GO:0070365
            GO:GO:0030177 GO:GO:0048568 GO:GO:0090009 GO:GO:0030948
            GO:GO:0022027 GO:GO:0035050 GO:GO:0030878 EMBL:AL590080
            GO:GO:0048853 GO:GO:0061009 HGNC:HGNC:4901 GO:GO:0061010
            GO:GO:0061011 GO:GO:0061017 GO:GO:0002573 GO:GO:0060431
            IPI:IPI01021632 SMR:F8VU08 Ensembl:ENST00000472590
            Ensembl:ENST00000492654 Uniprot:F8VU08
        Length = 98

 Score = 97 (39.2 bits), Expect = 0.00017, P = 0.00017
 Identities = 29/90 (32%), Positives = 43/90 (47%)

Query:    94 LGLQPRQVAVWFQNRRARWKTKQLERDYGVLKANYDALKLNYDSLQ----HDNE-ALLKE 148
             L L  RQV  WFQNRRA+W+  + E      K   ++L  + D  Q      N+ A L  
Sbjct:     2 LQLSERQVKTWFQNRRAKWRRLKQENPQSNKKEELESLDSSCDQRQDLPSEQNKGASLDS 61

Query:   149 IRELKSKLNEENTESNISVKQEETIVHETD 178
              +   S  ++E+ ES IS   ++ +  E D
Sbjct:    62 SQCSPSPASQEDLESEISEDSDQEVDIEGD 91


>UNIPROTKB|F1MJX6 [details] [associations]
            symbol:HOXA4 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
            EMBL:DAAA02010938 IPI:IPI00692351 UniGene:Bt.59423
            Ensembl:ENSBTAT00000001409 NextBio:20877630 Uniprot:F1MJX6
        Length = 253

 Score = 115 (45.5 bits), Expect = 0.00017, P = 0.00017
 Identities = 22/46 (47%), Positives = 28/46 (60%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 113
             QV  LEK F     L   R++++A  L L  RQV +WFQNRR +WK
Sbjct:   159 QVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWK 204


>UNIPROTKB|E2R5Y1 [details] [associations]
            symbol:HOXA2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0048703
            "embryonic viscerocranium morphogenesis" evidence=IEA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0045665 "negative regulation of neuron
            differentiation" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0042474 "middle ear morphogenesis"
            evidence=IEA] [GO:0035284 "brain segmentation" evidence=IEA]
            [GO:0021658 "rhombomere 3 morphogenesis" evidence=IEA] [GO:0021568
            "rhombomere 2 development" evidence=IEA] [GO:0009953
            "dorsal/ventral pattern formation" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0007379
            "segment specification" evidence=IEA] [GO:0002076 "osteoblast
            development" evidence=IEA] [GO:0001709 "cell fate determination"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0045665
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0008045 GO:GO:0002076
            GO:GO:0007379 GO:GO:0009953 GO:GO:0001709 GO:GO:0035284
            GO:GO:0048703 GO:GO:0042474 GO:GO:0021568
            GeneTree:ENSGT00700000104446 KO:K09302 CTD:3199 OMA:NCGSGLN
            GO:GO:0021658 EMBL:AAEX03009390 RefSeq:XP_851905.1
            Ensembl:ENSCAFT00000004713 GeneID:609592 KEGG:cfa:609592
            NextBio:20895182 Uniprot:E2R5Y1
        Length = 374

 Score = 108 (43.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
 Identities = 36/121 (29%), Positives = 56/121 (46%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKT----KQLERDYGV 123
             Q+  LEK F     L   R+V++A  L L  RQV VWFQNRR + K     K+ +   G 
Sbjct:   152 QLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQCKENQNSEGK 211

Query:   124 LKANYDALKLNYDSLQHDNEALLKEIRELKSKLNEENT---ESNISVKQEETIVHETDHQ 180
              K+  D+ K+  D    + ++L ++   +   L E      + N   +Q+    H  D Q
Sbjct:   212 FKSLEDSEKVEEDE---EEKSLFEQALSVSGALLEREGYTFQQNALSQQQAPNGHNGDSQ 268

Query:   181 N 181
             +
Sbjct:   269 S 269

 Score = 49 (22.3 bits), Expect = 0.00018, Sum P(2) = 0.00018
 Identities = 9/24 (37%), Positives = 14/24 (58%)

Query:   307 MEEHNFFGDETCNFFSDEQPPSLP 330
             +++ N F  ++C   SD   PSLP
Sbjct:   320 LQDFNVFSTDSCLQLSDAVSPSLP 343


>ZFIN|ZDB-GENE-030131-4340 [details] [associations]
            symbol:nkx2.9 "NK2 transcription factor related,
            locus 9 (Drosophila)" species:7955 "Danio rerio" [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0021514 "ventral spinal cord interneuron
            differentiation" evidence=IGI;IMP] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-030131-4340
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0021514
            HOGENOM:HOG000231923 HOVERGEN:HBG006689 eggNOG:NOG243784
            OrthoDB:EOG466VN6 EMBL:DQ924560 IPI:IPI00617799 UniGene:Dr.79439
            STRING:Q06AD2 InParanoid:Q06AD2 Uniprot:Q06AD2
        Length = 164

 Score = 108 (43.1 bits), Expect = 0.00018, P = 0.00018
 Identities = 28/66 (42%), Positives = 37/66 (56%)

Query:    56 HVSEKKRRL--SVDQVKALEKNFEVENKLE-PERKVKLAQELGLQPRQVAVWFQNRRARW 112
             H   KKRR+  S  Q   LE+ F  +  L  PER+ +LA  L L P QV +WFQN R + 
Sbjct:    75 HEKRKKRRVLFSKAQTYELERRFRQQRYLSAPERE-QLAHLLRLTPTQVKIWFQNHRYKM 133

Query:   113 KTKQLE 118
             K  ++E
Sbjct:   134 KRARIE 139


>UNIPROTKB|P17278 [details] [associations]
            symbol:HOXD4 "Homeobox protein Hox-D4" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 eggNOG:NOG314883 HOGENOM:HOG000231179
            HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7 EMBL:X52671 EMBL:X52672
            IPI:IPI00600943 PIR:S09256 UniGene:Gga.54375
            ProteinModelPortal:P17278 SMR:P17278 STRING:P17278
            InParanoid:P17278 Uniprot:P17278
        Length = 235

 Score = 114 (45.2 bits), Expect = 0.00018, P = 0.00018
 Identities = 21/46 (45%), Positives = 28/46 (60%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 113
             QV  LEK F     L   R++++A  L L  RQ+ +WFQNRR +WK
Sbjct:   155 QVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWK 200


>UNIPROTKB|F1SHT0 [details] [associations]
            symbol:HOXA2 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048703 "embryonic
            viscerocranium morphogenesis" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0045665 "negative regulation of neuron
            differentiation" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0042474 "middle ear morphogenesis"
            evidence=IEA] [GO:0035284 "brain segmentation" evidence=IEA]
            [GO:0021658 "rhombomere 3 morphogenesis" evidence=IEA] [GO:0021568
            "rhombomere 2 development" evidence=IEA] [GO:0009953
            "dorsal/ventral pattern formation" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0007379
            "segment specification" evidence=IEA] [GO:0002076 "osteoblast
            development" evidence=IEA] [GO:0001709 "cell fate determination"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0045665
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0008045 GO:GO:0002076
            GO:GO:0007379 GO:GO:0009953 GO:GO:0001709 GO:GO:0035284
            GO:GO:0048703 GO:GO:0042474 GO:GO:0021568
            GeneTree:ENSGT00700000104446 KO:K09302 OMA:NCGSGLN GO:GO:0021658
            EMBL:CU570959 RefSeq:XP_003134891.1 Ensembl:ENSSSCT00000018187
            GeneID:100519993 KEGG:ssc:100519993 Uniprot:F1SHT0
        Length = 380

 Score = 108 (43.1 bits), Expect = 0.00019, Sum P(2) = 0.00019
 Identities = 36/121 (29%), Positives = 56/121 (46%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKT----KQLERDYGV 123
             Q+  LEK F     L   R+V++A  L L  RQV VWFQNRR + K     K+ +   G 
Sbjct:   158 QLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQCKENQNSEGK 217

Query:   124 LKANYDALKLNYDSLQHDNEALLKEIRELKSKLNEENT---ESNISVKQEETIVHETDHQ 180
              K+  D+ K+  D    + ++L ++   +   L E      + N   +Q+    H  D Q
Sbjct:   218 FKSLEDSEKVEEDE---EEKSLFEQALSVSGALLEREGYTFQQNALSQQQAPNGHNGDSQ 274

Query:   181 N 181
             +
Sbjct:   275 S 275

 Score = 49 (22.3 bits), Expect = 0.00019, Sum P(2) = 0.00019
 Identities = 9/24 (37%), Positives = 14/24 (58%)

Query:   307 MEEHNFFGDETCNFFSDEQPPSLP 330
             +++ N F  ++C   SD   PSLP
Sbjct:   326 LQDFNVFSTDSCLQLSDAVSPSLP 349


>UNIPROTKB|F1NZJ3 [details] [associations]
            symbol:HOXD4 "Homeobox protein Hox-D4" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
            evidence=IEA] [GO:0048863 "stem cell differentiation" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0048863
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 KO:K09304
            UniGene:Gga.54375 CTD:3233 EMBL:AADN02020023 IPI:IPI01017209
            RefSeq:NP_001012293.1 RefSeq:XP_421990.1 Ensembl:ENSGALT00000038691
            GeneID:424139 KEGG:gga:424139 OMA:SRACSQQ NextBio:20826511
            Uniprot:F1NZJ3
        Length = 237

 Score = 114 (45.2 bits), Expect = 0.00019, P = 0.00019
 Identities = 21/46 (45%), Positives = 28/46 (60%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 113
             QV  LEK F     L   R++++A  L L  RQ+ +WFQNRR +WK
Sbjct:   157 QVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWK 202


>UNIPROTKB|E2QT33 [details] [associations]
            symbol:HOXB7 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 Ensembl:ENSCAFT00000026688 Uniprot:E2QT33
        Length = 237

 Score = 114 (45.2 bits), Expect = 0.00019, P = 0.00019
 Identities = 27/89 (30%), Positives = 44/89 (49%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKAN 127
             Q   LEK F     L   R++++A  L L  RQ+ +WFQNRR +WK +      G   ++
Sbjct:   148 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSTGPGATASS 207

Query:   128 YDALKLNYDSLQH-DNEALLKEIRELKSK 155
               +L+    +++   N    +E RE + K
Sbjct:   208 AGSLRALLPAVRAAGNLESPREYREREKK 236


>ZFIN|ZDB-GENE-001020-1 [details] [associations]
            symbol:hmx3 "homeo box (H6 family) 3" species:7955
            "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0042472 "inner ear morphogenesis" evidence=IGI] [GO:0048916
            "posterior lateral line development" evidence=IGI] [GO:0030154
            "cell differentiation" evidence=IEA] [GO:0007275 "multicellular
            organismal development" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0007399 "nervous system
            development" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 ZFIN:ZDB-GENE-001020-1 GO:GO:0005634 GO:GO:0007399
            GO:GO:0030154 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0042472 GO:GO:0048916 HSSP:P13297 HOGENOM:HOG000231923
            KO:K09349 CTD:340784 eggNOG:NOG312519 HOVERGEN:HBG098273
            OrthoDB:EOG4T1HN9 EMBL:AF288211 EMBL:EU050651 EMBL:BC095015
            IPI:IPI00859820 RefSeq:NP_571709.1 UniGene:Dr.82517
            ProteinModelPortal:Q504H8 STRING:Q504H8 GeneID:60310 KEGG:dre:60310
            InParanoid:Q9DFB1 NextBio:20892417 ArrayExpress:Q504H8
            Uniprot:Q504H8
        Length = 297

 Score = 116 (45.9 bits), Expect = 0.00019, P = 0.00019
 Identities = 31/90 (34%), Positives = 45/90 (50%)

Query:    59 EKKRR--LSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQ 116
             +KK R   S  QV  LE  F+++  L    +  LA  L L   QV +WFQNRR +WK +Q
Sbjct:   170 KKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAASLHLTETQVKIWFQNRRNKWK-RQ 228

Query:   117 LERDYGVLKANYDALK--LNYDSLQHDNEA 144
             L  +      ++ A +  +    L H+N A
Sbjct:   229 LAAELEAANLSHAAAQRIVRVPILYHENSA 258


>UNIPROTKB|Q90VZ9 [details] [associations]
            symbol:HOXA7 "Homeobox protein Hox-A7" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 HOGENOM:HOG000231181 eggNOG:NOG238660
            HOVERGEN:HBG016849 EMBL:AJ291729 EMBL:AF408695 IPI:IPI00573429
            RefSeq:NP_989926.1 RefSeq:XP_003640750.1 RefSeq:XP_003640779.1
            UniGene:Gga.5122 ProteinModelPortal:Q90VZ9 SMR:Q90VZ9
            GeneID:100858514 GeneID:100858856 GeneID:395290 KEGG:gga:100858514
            KEGG:gga:100858856 KEGG:gga:395290 CTD:3204 InParanoid:Q90VZ9
            KO:K09307 OrthoDB:EOG4W9J4Z NextBio:20815375 Uniprot:Q90VZ9
        Length = 219

 Score = 113 (44.8 bits), Expect = 0.00019, P = 0.00019
 Identities = 24/77 (31%), Positives = 37/77 (48%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKAN 127
             Q   LEK F     L   R++++A  L L  RQ+ +WFQNRR +WK +  E        N
Sbjct:   140 QTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKEESSSTPAPN 199

Query:   128 YD-ALKLNYDSLQHDNE 143
                +   + + ++ D E
Sbjct:   200 EPTSAAASVEKVEEDEE 216


>UNIPROTKB|A4FUC1 [details] [associations]
            symbol:HOXC4 "HOXC4 protein" species:9913 "Bos taurus"
            [GO:0005634 "nucleus" evidence=IEA] [GO:0071837 "HMG box domain
            binding" evidence=IEA] [GO:0051216 "cartilage development"
            evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
            evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104090 GO:GO:0051216 eggNOG:NOG314883
            KO:K09304 GO:GO:0048562 HOGENOM:HOG000231179 HOVERGEN:HBG016849
            OrthoDB:EOG4GTKF7 OMA:ERQYNCA CTD:3221 EMBL:DAAA02012839
            EMBL:BC114690 IPI:IPI00729483 RefSeq:NP_001095843.1
            UniGene:Bt.29064 STRING:A4FUC1 Ensembl:ENSBTAT00000004277
            GeneID:613740 KEGG:bta:613740 InParanoid:A4FUC1 NextBio:20898740
            Uniprot:A4FUC1
        Length = 264

 Score = 115 (45.5 bits), Expect = 0.00019, P = 0.00019
 Identities = 21/46 (45%), Positives = 28/46 (60%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 113
             QV  LEK F     L   R++++A  L L  RQ+ +WFQNRR +WK
Sbjct:   167 QVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWK 212


>UNIPROTKB|E2QSM9 [details] [associations]
            symbol:HOXC4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0071837
            "HMG box domain binding" evidence=IEA] [GO:0051216 "cartilage
            development" evidence=IEA] [GO:0048562 "embryonic organ
            morphogenesis" evidence=IEA] [GO:0009952 "anterior/posterior
            pattern specification" evidence=IEA] [GO:0043565 "sequence-specific
            DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104090 GO:GO:0051216 KO:K09304 GO:GO:0048562
            OMA:ERQYNCA CTD:3221 EMBL:AAEX03014973 RefSeq:XP_543624.1
            RefSeq:XP_856443.1 Ensembl:ENSCAFT00000010661 GeneID:486498
            KEGG:cfa:486498 NextBio:20860261 Uniprot:E2QSM9
        Length = 264

 Score = 115 (45.5 bits), Expect = 0.00019, P = 0.00019
 Identities = 21/46 (45%), Positives = 28/46 (60%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 113
             QV  LEK F     L   R++++A  L L  RQ+ +WFQNRR +WK
Sbjct:   167 QVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWK 212


>UNIPROTKB|P09017 [details] [associations]
            symbol:HOXC4 "Homeobox protein Hox-C4" species:9606 "Homo
            sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
            evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
            [GO:0071837 "HMG box domain binding" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=NAS]
            [GO:0005634 "nucleus" evidence=NAS] [GO:0007275 "multicellular
            organismal development" evidence=NAS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=NAS] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0051216 eggNOG:NOG314883 KO:K09304 GO:GO:0048562
            HOGENOM:HOG000231179 HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7
            OMA:ERQYNCA EMBL:X07495 EMBL:AY014298 EMBL:AY014297 EMBL:AC023794
            IPI:IPI00295561 PIR:S01030 RefSeq:NP_055435.2 RefSeq:NP_705897.1
            UniGene:Hs.549040 ProteinModelPortal:P09017 SMR:P09017
            IntAct:P09017 STRING:P09017 PhosphoSite:P09017 DMDM:281185468
            PRIDE:P09017 DNASU:3221 Ensembl:ENST00000303406
            Ensembl:ENST00000430889 GeneID:3221 KEGG:hsa:3221 UCSC:uc001seu.3
            CTD:3221 GeneCards:GC12P054410 H-InvDB:HIX0079410
            H-InvDB:HIX0079484 H-InvDB:HIX0171647 HGNC:HGNC:5126 MIM:142974
            neXtProt:NX_P09017 PharmGKB:PA29401 InParanoid:P09017
            PhylomeDB:P09017 GenomeRNAi:3221 NextBio:12814 Bgee:P09017
            Genevestigator:P09017 GermOnline:ENSG00000198353 Uniprot:P09017
        Length = 264

 Score = 115 (45.5 bits), Expect = 0.00019, P = 0.00019
 Identities = 21/46 (45%), Positives = 28/46 (60%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 113
             QV  LEK F     L   R++++A  L L  RQ+ +WFQNRR +WK
Sbjct:   167 QVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWK 212


>UNIPROTKB|F1SR58 [details] [associations]
            symbol:HOXC4 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0071837 "HMG box
            domain binding" evidence=IEA] [GO:0051216 "cartilage development"
            evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
            evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104090 GO:GO:0051216 KO:K09304 GO:GO:0048562
            OMA:ERQYNCA EMBL:CU633419 RefSeq:XP_001925163.2
            Ensembl:ENSSSCT00000000306 GeneID:100154759 KEGG:ssc:100154759
            Uniprot:F1SR58
        Length = 264

 Score = 115 (45.5 bits), Expect = 0.00019, P = 0.00019
 Identities = 21/46 (45%), Positives = 28/46 (60%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 113
             QV  LEK F     L   R++++A  L L  RQ+ +WFQNRR +WK
Sbjct:   167 QVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWK 212


>MGI|MGI:96195 [details] [associations]
            symbol:Hoxc4 "homeobox C4" species:10090 "Mus musculus"
            [GO:0001501 "skeletal system development" evidence=IMP] [GO:0003677
            "DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IMP] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
            evidence=IMP] [GO:0051216 "cartilage development" evidence=IMP]
            [GO:0071837 "HMG box domain binding" evidence=IPI]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            MGI:MGI:96195 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
            GO:GO:0051216 eggNOG:NOG314883 KO:K09304 GO:GO:0048562
            HOGENOM:HOG000231179 HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7
            OMA:ERQYNCA CTD:3221 EMBL:D11328 EMBL:S62287 EMBL:X69019
            EMBL:M81660 IPI:IPI00122942 PIR:S35219 RefSeq:NP_038581.2
            UniGene:Mm.1351 ProteinModelPortal:Q08624 SMR:Q08624 STRING:Q08624
            PhosphoSite:Q08624 PRIDE:Q08624 Ensembl:ENSMUST00000100164
            GeneID:15423 KEGG:mmu:15423 UCSC:uc007xxg.1 InParanoid:Q08624
            NextBio:288166 Bgee:Q08624 CleanEx:MM_HOXC4 Genevestigator:Q08624
            GermOnline:ENSMUSG00000075394 Uniprot:Q08624
        Length = 264

 Score = 115 (45.5 bits), Expect = 0.00019, P = 0.00019
 Identities = 21/46 (45%), Positives = 28/46 (60%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 113
             QV  LEK F     L   R++++A  L L  RQ+ +WFQNRR +WK
Sbjct:   167 QVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWK 212


>RGD|1559918 [details] [associations]
            symbol:Hoxb7 "homeo box B7" species:10116 "Rattus norvegicus"
            [GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737
            "cytoplasm" evidence=IEA;ISO] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0009952 "anterior/posterior
            pattern specification" evidence=IEA;ISO] [GO:0030099 "myeloid cell
            differentiation" evidence=IEA;ISO] [GO:0043565 "sequence-specific
            DNA binding" evidence=IEA] [GO:0048704 "embryonic skeletal system
            morphogenesis" evidence=IEA;ISO] [GO:0090190 "positive regulation
            of branching involved in ureteric bud morphogenesis"
            evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            RGD:1559918 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 HOGENOM:HOG000231181 GeneTree:ENSGT00700000104090
            GO:GO:0090190 GO:GO:0048704 eggNOG:NOG238660 GO:GO:0030099
            HOVERGEN:HBG016849 KO:K09307 OrthoDB:EOG4W9J4Z CTD:3217 OMA:WMRSSGT
            EMBL:BC079340 EMBL:M37566 IPI:IPI00195529 PIR:T10775
            RefSeq:NP_001017480.1 UniGene:Rn.113631 ProteinModelPortal:P18864
            SMR:P18864 PhosphoSite:P18864 Ensembl:ENSRNOT00000031035
            GeneID:497985 KEGG:rno:497985 UCSC:RGD:1559918 InParanoid:P18864
            NextBio:698299 Genevestigator:P18864 GermOnline:ENSRNOG00000007611
            Uniprot:P18864
        Length = 219

 Score = 109 (43.4 bits), Expect = 0.00020, Sum P(2) = 0.00020
 Identities = 20/46 (43%), Positives = 27/46 (58%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 113
             Q   LEK F     L   R++++A  L L  RQ+ +WFQNRR +WK
Sbjct:   148 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWK 193

 Score = 38 (18.4 bits), Expect = 0.00020, Sum P(2) = 0.00020
 Identities = 8/26 (30%), Positives = 15/26 (57%)

Query:   168 KQEETIVHETDHQNKATLDRDQESDD 193
             K+ +T    T  Q+KA  D ++E ++
Sbjct:   194 KENKTSGPGTTGQDKAEADEEEEEEE 219


>RGD|1584840 [details] [associations]
            symbol:Barx2 "BARX homeobox 2" species:10116 "Rattus norvegicus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=ISO] [GO:0000976 "transcription
            regulatory region sequence-specific DNA binding" evidence=IEA]
            [GO:0001502 "cartilage condensation" evidence=ISO] [GO:0003677 "DNA
            binding" evidence=ISO] [GO:0003682 "chromatin binding"
            evidence=ISO] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA;ISO] [GO:0005634
            "nucleus" evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=ISO] [GO:0014902 "myotube differentiation" evidence=ISO]
            [GO:0042637 "catagen" evidence=ISO] [GO:0043565 "sequence-specific
            DNA binding" evidence=ISO] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=ISO]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 RGD:1584840 GO:GO:0005634
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0000976 IPI:IPI00558793
            Ensembl:ENSRNOT00000043255 Uniprot:F1M1I7
        Length = 191

 Score = 111 (44.1 bits), Expect = 0.00020, P = 0.00020
 Identities = 22/51 (43%), Positives = 30/51 (58%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLE 118
             Q+  LEK F+ +  L    ++ LAQ LGL   QV  W+QNRR +WK   L+
Sbjct:    86 QLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKWKKMVLK 136


>UNIPROTKB|Q9YH13 [details] [associations]
            symbol:HOXC8 "Homeobox protein Hox-C8" species:9031 "Gallus
            gallus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0000976 HOVERGEN:HBG016849 KO:K09308 EMBL:X94179
            IPI:IPI00581117 RefSeq:NP_990224.1 UniGene:Gga.413
            ProteinModelPortal:Q9YH13 SMR:Q9YH13 GeneID:395711 KEGG:gga:395711
            CTD:3224 NextBio:20815781 Uniprot:Q9YH13
        Length = 242

 Score = 114 (45.2 bits), Expect = 0.00020, P = 0.00020
 Identities = 23/53 (43%), Positives = 33/53 (62%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERD 120
             Q   LEK F     L  +R+++++  LGL  RQV +WFQNRR +WK K+  +D
Sbjct:   160 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-KENNKD 211


>UNIPROTKB|E1BI54 [details] [associations]
            symbol:HOXC8 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048705 "skeletal
            system morphogenesis" evidence=IEA] [GO:0030182 "neuron
            differentiation" evidence=IEA] [GO:0009952 "anterior/posterior
            pattern specification" evidence=IEA] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0000976
            "transcription regulatory region sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0030182
            GO:GO:0009952 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0000976
            GO:GO:0048705 GeneTree:ENSGT00700000104332 KO:K09308 OMA:HHGTSSI
            CTD:3224 EMBL:DAAA02012840 IPI:IPI00711888 RefSeq:XP_002687278.1
            RefSeq:XP_002704291.1 ProteinModelPortal:E1BI54 SMR:E1BI54
            Ensembl:ENSBTAT00000016117 GeneID:100295249 KEGG:bta:100295249
            Uniprot:E1BI54
        Length = 242

 Score = 114 (45.2 bits), Expect = 0.00020, P = 0.00020
 Identities = 23/53 (43%), Positives = 33/53 (62%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERD 120
             Q   LEK F     L  +R+++++  LGL  RQV +WFQNRR +WK K+  +D
Sbjct:   160 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-KENNKD 211


>UNIPROTKB|E2QRS0 [details] [associations]
            symbol:HOXC8 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
            GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
            GeneTree:ENSGT00700000104054 EMBL:AAEX03014973 EMBL:AAEX03014974
            Ensembl:ENSCAFT00000010684 Ensembl:ENSCAFT00000047496
            NextBio:20892804 Uniprot:E2QRS0
        Length = 242

 Score = 114 (45.2 bits), Expect = 0.00020, P = 0.00020
 Identities = 23/53 (43%), Positives = 33/53 (62%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERD 120
             Q   LEK F     L  +R+++++  LGL  RQV +WFQNRR +WK K+  +D
Sbjct:   160 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-KENNKD 211


>UNIPROTKB|E2RQ19 [details] [associations]
            symbol:HOXB8 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704
            "embryonic skeletal system morphogenesis" evidence=IEA] [GO:0021516
            "dorsal spinal cord development" evidence=IEA] [GO:0019233 "sensory
            perception of pain" evidence=IEA] [GO:0009952 "anterior/posterior
            pattern specification" evidence=IEA] [GO:0008344 "adult locomotory
            behavior" evidence=IEA] [GO:0007625 "grooming behavior"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0000976
            "transcription regulatory region sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
            GO:GO:0019233 GO:GO:0008344 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704
            GO:GO:0000976 GO:GO:0007625 GO:GO:0021516
            GeneTree:ENSGT00700000104332 OMA:MERAQEV EMBL:AAEX03006516
            Ensembl:ENSCAFT00000026696 NextBio:20863956 Uniprot:E2RQ19
        Length = 242

 Score = 114 (45.2 bits), Expect = 0.00020, P = 0.00020
 Identities = 23/53 (43%), Positives = 33/53 (62%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERD 120
             Q   LEK F     L  +R+++++  LGL  RQV +WFQNRR +WK K+  +D
Sbjct:   156 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-KENNKD 207


>UNIPROTKB|I3L3R1 [details] [associations]
            symbol:HOXB8 "Homeobox B8, isoform CRA_a" species:9606
            "Homo sapiens" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:CH471109
            GO:GO:0000976 EMBL:AC103702 UniGene:Hs.514292 HGNC:HGNC:5119
            SMR:I3L3R1 Ensembl:ENST00000576562 Uniprot:I3L3R1
        Length = 242

 Score = 114 (45.2 bits), Expect = 0.00020, P = 0.00020
 Identities = 23/53 (43%), Positives = 33/53 (62%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERD 120
             Q   LEK F     L  +R+++++  LGL  RQV +WFQNRR +WK K+  +D
Sbjct:   156 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-KENNKD 207


>UNIPROTKB|P31273 [details] [associations]
            symbol:HOXC8 "Homeobox protein Hox-C8" species:9606 "Homo
            sapiens" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0030182 "neuron differentiation"
            evidence=IEA] [GO:0048705 "skeletal system morphogenesis"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
            [GO:0007275 "multicellular organismal development" evidence=NAS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=NAS] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0030182 GO:GO:0009952 EMBL:CH471054 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0000122 GO:GO:0000976
            GO:GO:0048705 HOVERGEN:HBG016849 eggNOG:NOG314669 OrthoDB:EOG4H464V
            KO:K09308 OMA:HHGTSSI CTD:3224 EMBL:AY014300 EMBL:AY014299
            EMBL:AK290959 EMBL:BC053898 EMBL:X99680 EMBL:X99681 IPI:IPI00010756
            PIR:S15534 RefSeq:NP_073149.1 UniGene:Hs.664500
            ProteinModelPortal:P31273 SMR:P31273 DIP:DIP-52312N IntAct:P31273
            MINT:MINT-2802457 STRING:P31273 PhosphoSite:P31273 DMDM:13124745
            PRIDE:P31273 DNASU:3224 Ensembl:ENST00000040584 GeneID:3224
            KEGG:hsa:3224 UCSC:uc001ser.3 GeneCards:GC12P054402 HGNC:HGNC:5129
            HPA:HPA028911 MIM:142970 neXtProt:NX_P31273 PharmGKB:PA29404
            InParanoid:P31273 PhylomeDB:P31273 ChiTaRS:HOXC8 GenomeRNAi:3224
            NextBio:12831 Bgee:P31273 CleanEx:HS_HOXC8 Genevestigator:P31273
            GermOnline:ENSG00000037965 Uniprot:P31273
        Length = 242

 Score = 114 (45.2 bits), Expect = 0.00020, P = 0.00020
 Identities = 23/53 (43%), Positives = 33/53 (62%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERD 120
             Q   LEK F     L  +R+++++  LGL  RQV +WFQNRR +WK K+  +D
Sbjct:   160 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-KENNKD 211


>MGI|MGI:96198 [details] [associations]
            symbol:Hoxc8 "homeobox C8" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IDA] [GO:0000976 "transcription
            regulatory region sequence-specific DNA binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IGI;IMP] [GO:0030182 "neuron differentiation"
            evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0048705 "skeletal system morphogenesis"
            evidence=IGI;IMP] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 MGI:MGI:96198 GO:GO:0005634
            GO:GO:0030182 GO:GO:0009952 GO:GO:0003677 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0000122 GO:GO:0000976
            GO:GO:0048705 HOVERGEN:HBG016849 GeneTree:ENSGT00700000104332
            eggNOG:NOG314669 OrthoDB:EOG4H464V KO:K09308 OMA:HHGTSSI CTD:3224
            EMBL:X07439 EMBL:X07646 EMBL:M35603 EMBL:X03659 IPI:IPI00132381
            PIR:B25180 PIR:B36023 PIR:S13785 RefSeq:NP_034596.1 UniGene:Mm.6167
            ProteinModelPortal:P09025 SMR:P09025 IntAct:P09025 MINT:MINT-210049
            STRING:P09025 PhosphoSite:P09025 PRIDE:P09025 DNASU:15426
            Ensembl:ENSMUST00000001703 GeneID:15426 KEGG:mmu:15426
            UCSC:uc012aaf.1 InParanoid:P09025 NextBio:288178 Bgee:P09025
            CleanEx:MM_HOXC8 Genevestigator:P09025
            GermOnline:ENSMUSG00000001657 Uniprot:P09025
        Length = 242

 Score = 114 (45.2 bits), Expect = 0.00020, P = 0.00020
 Identities = 23/53 (43%), Positives = 33/53 (62%)

Query:    68 QVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERD 120
             Q   LEK F     L  +R+++++  LGL  RQV +WFQNRR +WK K+  +D
Sbjct:   160 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-KENNKD 211

WARNING:  HSPs involving 212 database sequences were not reported due to the
          limiting value of parameter B = 250.


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.313   0.130   0.375    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      338       280   0.00082  115 3  11 23  0.43    34
                                                     33  0.41    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  462
  No. of states in DFA:  610 (65 KB)
  Total size of DFA:  221 KB (2122 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  31.33u 0.10s 31.43t   Elapsed:  00:00:01
  Total cpu time:  31.35u 0.10s 31.45t   Elapsed:  00:00:01
  Start:  Thu May  9 22:16:40 2013   End:  Thu May  9 22:16:41 2013
WARNINGS ISSUED:  2
the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data


Symbol, full name	Information	P value
BLAST match view associations BLAST with HB6 HB6 HB6 homeobox protein 6	protein from Arabidopsis thaliana	7.8e-62
BLAST match view associations BLAST with HB16 HB16 HB16 AT4G40060	protein from Arabidopsis thaliana	2.6e-57
BLAST match view associations BLAST with HB5 HB5 HB5 homeobox protein 5	protein from Arabidopsis thaliana	4.2e-53
BLAST match view associations BLAST with HB-1 HB-1 HB-1 AT3G01470	protein from Arabidopsis thaliana	1.1e-32
BLAST match view associations BLAST with ATHB13 ATHB13 ATHB13 AT1G69780	protein from Arabidopsis thaliana	2.3e-32
BLAST match view associations BLAST with HB20 HB20 HB20 AT3G01220	protein from Arabidopsis thaliana	3.0e-30
BLAST match view associations BLAST with HB-3 HB-3 HB-3 AT5G15150	protein from Arabidopsis thaliana	3.4e-29
BLAST match view associations BLAST with HB-7 HB-7 HB-7 homeobox 7	protein from Arabidopsis thaliana	1.9e-28
BLAST match view associations BLAST with AtHB23 AtHB23 AtHB23 AT1G26960	protein from Arabidopsis thaliana	1.2e-26
BLAST match view associations BLAST with HB-12 HB-12 HB-12 homeobox 12	protein from Arabidopsis thaliana	2.2e-25
BLAST match view associations BLAST with HB51 HB51 HB51 AT5G03790	protein from Arabidopsis thaliana	7.0e-22
BLAST match view associations BLAST with HB21 HB21 HB21 AT2G18550	protein from Arabidopsis thaliana	2.4e-21
BLAST match view associations BLAST with HB53 HB53 HB53 AT5G66700	protein from Arabidopsis thaliana	3.5e-20
BLAST match view associations BLAST with HB22 HB22 HB22 AT2G36610	protein from Arabidopsis thaliana	1.5e-19
BLAST match view associations BLAST with HB40 HB40 HB40 AT4G36740	protein from Arabidopsis thaliana	1.5e-19
BLAST match view associations BLAST with HB52 HB52 HB52 homeobox protein 52	protein from Arabidopsis thaliana	7.5e-18
BLAST match view associations BLAST with HAT14 HAT14 HAT14 AT5G06710	protein from Arabidopsis thaliana	3.7e-14
BLAST match view associations BLAST with HB4 HB4 HB4 AT2G44910	protein from Arabidopsis thaliana	1.1e-13
BLAST match view associations BLAST with HAT22 HAT22 HAT22	protein from Arabidopsis thaliana	2.9e-13
BLAST match view associations BLAST with HAT1 HAT1 HAT1 AT4G17460	protein from Arabidopsis thaliana	6.7e-13
BLAST match view associations BLAST with HAT2 HAT2 HAT2	protein from Arabidopsis thaliana	7.0e-13
BLAST match view associations BLAST with HB-2 HB-2 HB-2 AT4G16780	protein from Arabidopsis thaliana	7.2e-13
BLAST match view associations BLAST with HAT3 HAT3 HAT3 homeobox-leucine zipper protein 3	protein from Arabidopsis thaliana	1.8e-12
BLAST match view associations BLAST with HAT9 HAT9 HAT9 AT2G22800	protein from Arabidopsis thaliana	2.7e-12
BLAST match view associations BLAST with HB17 HB17 HB17 homeobox-leucine zipper protein 17	protein from Arabidopsis thaliana	2.5e-11
BLAST match view associations BLAST with HB18 HB18 HB18 AT1G70920	protein from Arabidopsis thaliana	4.4e-11
BLAST match view associations BLAST with HHEX HHEX HHEX Uncharacterized protein	protein from Sus scrofa	5.9e-10
BLAST match view associations BLAST with HHEX HHEX HHEX HHEX protein	protein from Bos taurus	8.4e-10
BLAST match view associations BLAST with HHEX HHEX HHEX Uncharacterized protein	protein from Canis lupus familiaris	2.6e-09
BLAST match view associations BLAST with HHEX HHEX HHEX Hematopoietically-expressed homeobox protein HHEX	protein from Homo sapiens	4.6e-09
BLAST match view associations BLAST with Hhex Hhex Hhex hematopoietically expressed homeobox	gene from Rattus norvegicus	6.1e-09
BLAST match view associations BLAST with hhex hhex hhex Hematopoietically-expressed homeobox protein hhex	protein from Xenopus (Silurana) tropicalis	8.5e-09
BLAST match view associations BLAST with Hhex Hhex Hhex hematopoietically expressed homeobox	protein from Mus musculus	2.5e-08
BLAST match view associations BLAST with hhex hhex hhex Hematopoietically-expressed homeobox protein hhex	protein from Xenopus laevis	4.5e-08
BLAST match view associations BLAST with pha-2 pha-2 pha-2	gene from Caenorhabditis elegans	5.0e-08
BLAST match view associations BLAST with DBX2 DBX2 DBX2 Homeobox protein DBX2	protein from Gallus gallus	8.2e-08
BLAST match view associations BLAST with DBX2 DBX2 DBX2 Homeobox protein DBX2	protein from Gallus gallus	8.2e-08
BLAST match view associations BLAST with DBX2 DBX2 DBX2 Homeobox protein DBX2	protein from Gallus gallus	8.2e-08
BLAST match view associations BLAST with NOBOX NOBOX NOBOX Homeobox protein NOBOX	protein from Homo sapiens	1.8e-07
BLAST match view associations BLAST with NKX6-2 NKX6-2 NKX6-2 Uncharacterized protein	protein from Gallus gallus	3.8e-07
BLAST match view associations BLAST with HLX HLX HLX H2.0-like homeobox protein	protein from Homo sapiens	3.8e-07
BLAST match view associations BLAST with LOC516179 LOC516179 LOC516179 Uncharacterized protein	protein from Bos taurus	5.0e-07
BLAST match view associations BLAST with HHEX HHEX HHEX Hematopoietically-expressed homeobox protein HHEX	protein from Gallus gallus	7.5e-07
BLAST match view associations BLAST with hhex hhex hhex hematopoietically expressed homeobox	gene_product from Danio rerio	8.3e-07
BLAST match view associations BLAST with hopx hopx hopx HOP homeobox	gene_product from Danio rerio	8.3e-07
BLAST match view associations BLAST with TLX3 TLX3 TLX3 T-cell leukemia homeobox protein 3	protein from Gallus gallus	1.1e-06
BLAST match view associations BLAST with Gga.48067 Gga.48067 Gga.48067 Uncharacterized protein	protein from Gallus gallus	1.4e-06
BLAST match view associations BLAST with ceh-9 ceh-9 ceh-9	gene from Caenorhabditis elegans	1.4e-06
BLAST match view associations BLAST with HHEX HHEX HHEX Hematopoietically-expressed homeobox protein HHEX	protein from Gallus gallus	1.7e-06
BLAST match view associations BLAST with HOXA4 HOXA4 HOXA4 Homeobox protein Hox-A4	protein from Homo sapiens	1.8e-06
BLAST match view associations BLAST with NKX3-1 NKX3-1 NKX3-1 Uncharacterized protein	protein from Equus caballus	1.8e-06
BLAST match view associations BLAST with Hoxc4 Hoxc4 Hoxc4 homeo box C4	gene from Rattus norvegicus	1.8e-06
BLAST match view associations BLAST with Hoxc4 Hoxc4 Hoxc4 Homeobox protein Hox-C4	protein from Rattus norvegicus	1.8e-06
BLAST match view associations BLAST with HHEX HHEX HHEX Hematopoietically-expressed homeobox protein HHEX	protein from Gallus gallus	1.8e-06
BLAST match view associations BLAST with HOXD8 HOXD8 HOXD8 Homeobox protein Hox-D8	protein from Gallus gallus	2.3e-06
BLAST match view associations BLAST with NKX3-1 NKX3-1 NKX3-1 Uncharacterized protein	protein from Canis lupus familiaris	2.3e-06
BLAST match view associations BLAST with HOXB8 HOXB8 HOXB8 Homeobox protein Hox-B8	protein from Homo sapiens	2.3e-06
BLAST match view associations BLAST with PANDA_002743 PANDA_002743 PANDA_002743 Putative uncharacterized protein	protein from Ailuropoda melanoleuca	2.3e-06
BLAST match view associations BLAST with Hoxb8 Hoxb8 Hoxb8 homeo box B8	gene from Rattus norvegicus	2.3e-06
BLAST match view associations BLAST with Hoxc9 Hoxc9 Hoxc9 homeobox C9	gene from Rattus norvegicus	2.3e-06
BLAST match view associations BLAST with Hoxc8 Hoxc8 Hoxc8 Homeobox protein Hox-C8	protein from Rattus norvegicus	2.3e-06
BLAST match view associations BLAST with HOXB8 HOXB8 HOXB8 Homeobox protein Hox-B8	protein from Sus scrofa	3.8e-06
BLAST match view associations BLAST with MEOX1 MEOX1 MEOX1 Homeobox protein MOX-1	protein from Homo sapiens	4.9e-06
BLAST match view associations BLAST with HOXB5 HOXB5 HOXB5 Homeobox protein Hox-B5	protein from Gallus gallus	6.3e-06
BLAST match view associations BLAST with HOXB6 HOXB6 HOXB6 Homeobox protein Hox-B6	protein from Gallus gallus	6.3e-06
BLAST match view associations BLAST with ceh-5 ceh-5 ceh-5	gene from Caenorhabditis elegans	6.3e-06
BLAST match view associations BLAST with DBX2 DBX2 DBX2 Homeobox protein DBX2	protein from Gallus gallus	7.0e-06
BLAST match view associations BLAST with Nkx3-1 Nkx3-1 Nkx3-1 NK-3 transcription factor, locus 1 (Drosophila)	protein from Mus musculus	7.1e-06
BLAST match view associations BLAST with MEOX2 MEOX2 MEOX2 Uncharacterized protein	protein from Gallus gallus	7.7e-06
BLAST match view associations BLAST with Dbx1 Dbx1 Dbx1 developing brain homeobox 1	protein from Mus musculus	7.9e-06
BLAST match view associations BLAST with Dbx1 Dbx1 Dbx1 developing brain homeobox 1	gene from Rattus norvegicus	7.9e-06
BLAST match view associations BLAST with CDX4 CDX4 CDX4 Uncharacterized protein	protein from Gallus gallus	8.2e-06
BLAST match view associations BLAST with HOXD11 HOXD11 HOXD11 Homeobox protein Hox-D11	protein from Gallus gallus	8.2e-06
BLAST match view associations BLAST with HOXB7 HOXB7 HOXB7 Uncharacterized protein	protein from Gallus gallus	8.2e-06
BLAST match view associations BLAST with HOXD1 HOXD1 HOXD1 Homeobox protein Hox-D1	protein from Gallus gallus	8.2e-06
BLAST match view associations BLAST with Hoxa7 Hoxa7 Hoxa7 homeobox A7	gene from Rattus norvegicus	8.2e-06
BLAST match view associations BLAST with DBX2 DBX2 DBX2 Uncharacterized protein	protein from Canis lupus familiaris	9.0e-06
BLAST match view associations BLAST with lbx1 lbx1 lbx1 Transcription factor LBX1	protein from Xenopus (Silurana) tropicalis	1.0e-05
BLAST match view associations BLAST with TLX1 TLX1 TLX1 T-cell leukemia homeobox protein 1	protein from Gallus gallus	1.1e-05
BLAST match view associations BLAST with HDG4 HDG4 HDG4 AT4G17710	protein from Arabidopsis thaliana	1.2e-05
BLAST match view associations BLAST with CDX2 CDX2 CDX2 Uncharacterized protein	protein from Bos taurus	1.4e-05
BLAST match view associations BLAST with NKX6-2 NKX6-2 NKX6-2 Homeobox protein Nkx-6.2	protein from Homo sapiens	1.5e-05
BLAST match view associations BLAST with F1NPY3 F1NPY3 F1NPY3 Uncharacterized protein	protein from Gallus gallus	1.5e-05
BLAST match view associations BLAST with nkx6.2 nkx6.2 nkx6.2 NK6 transcription factor related, locus 2	gene_product from Danio rerio	1.5e-05
BLAST match view associations BLAST with dbx1a dbx1a dbx1a developing brain homeobox 1a	gene_product from Danio rerio	1.5e-05
BLAST match view associations BLAST with dbx1b dbx1b dbx1b developing brain homeobox 1b	gene_product from Danio rerio	1.6e-05
BLAST match view associations BLAST with HGTX HGTX HGTX	protein from Drosophila melanogaster	1.6e-05
BLAST match view associations BLAST with Nkx3-1 Nkx3-1 Nkx3-1 NK3 homeobox 1	gene from Rattus norvegicus	1.6e-05
BLAST match view associations BLAST with CDX1 CDX1 CDX1 Homeobox protein CDX-1	protein from Gallus gallus	1.8e-05
BLAST match view associations BLAST with BARX2 BARX2 BARX2 Homeobox protein BarH-like 2	protein from Homo sapiens	1.8e-05
BLAST match view associations BLAST with I3LRX4 I3LRX4 I3LRX4 Uncharacterized protein	protein from Sus scrofa	1.8e-05
BLAST match view associations BLAST with ceh-19 ceh-19 ceh-19	gene from Caenorhabditis elegans	1.8e-05
BLAST match view associations BLAST with DBX1 DBX1 DBX1 Uncharacterized protein	protein from Gallus gallus	1.8e-05
BLAST match view associations BLAST with DBX1 DBX1 DBX1 Homeobox protein DBX1	protein from Homo sapiens	1.8e-05
BLAST match view associations BLAST with DBX1 DBX1 DBX1 Uncharacterized protein	protein from Sus scrofa	1.8e-05
BLAST match view associations BLAST with DBX1 DBX1 DBX1 Homeobox protein DBX1	protein from Bos taurus	1.9e-05
BLAST match view associations BLAST with lbx2 lbx2 lbx2 ladybird homeobox homolog 2 (Drosophila)	gene_product from Danio rerio	2.1e-05
BLAST match view associations BLAST with HDG11 HDG11 HDG11 AT1G73360	protein from Arabidopsis thaliana	2.1e-05
BLAST match view associations BLAST with Gga.20677 Gga.20677 Gga.20677 Uncharacterized protein	protein from Gallus gallus	2.3e-05