BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019642
(338 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 558 bits (1439), Expect = e-159, Method: Compositional matrix adjust.
Identities = 268/315 (85%), Positives = 282/315 (89%), Gaps = 1/315 (0%)
Query: 25 FWNVSSYVI-FSDQDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXX 83
+W+ + + + +QDDYEVVRKVGRGKYSEVFEGINVN NE+C
Sbjct: 18 YWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREI 77
Query: 84 XXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLK 143
LQNLCGGPN+VKLLDIVRDQHSKTPSLIFEYVN+TDFKVLYPTLTDYDIRYYIYELLK
Sbjct: 78 KILQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLK 137
Query: 144 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 203
ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL
Sbjct: 138 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 197
Query: 204 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYH 263
LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD LN YLNKY
Sbjct: 198 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYR 257
Query: 264 LELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHP 323
+ELDPQL+ALVGRHSRKPW KF+NADNQHLVSPEAIDFLDKLLRYDHQ+RLTA EAM HP
Sbjct: 258 IELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHP 317
Query: 324 YFAQVRAAESSRTRA 338
YF QVRAAE+SRTRA
Sbjct: 318 YFQQVRAAENSRTRA 332
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 558 bits (1439), Expect = e-159, Method: Compositional matrix adjust.
Identities = 268/315 (85%), Positives = 282/315 (89%), Gaps = 1/315 (0%)
Query: 25 FWNVSSYVI-FSDQDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXX 83
+W+ + + + +QDDYEVVRKVGRGKYSEVFEGINVN NE+C
Sbjct: 19 YWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREI 78
Query: 84 XXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLK 143
LQNLCGGPN+VKLLDIVRDQHSKTPSLIFEYVN+TDFKVLYPTLTDYDIRYYIYELLK
Sbjct: 79 KILQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLK 138
Query: 144 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 203
ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL
Sbjct: 139 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 198
Query: 204 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYH 263
LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD LN YLNKY
Sbjct: 199 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYR 258
Query: 264 LELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHP 323
+ELDPQL+ALVGRHSRKPW KF+NADNQHLVSPEAIDFLDKLLRYDHQ+RLTA EAM HP
Sbjct: 259 IELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHP 318
Query: 324 YFAQVRAAESSRTRA 338
YF QVRAAE+SRTRA
Sbjct: 319 YFQQVRAAENSRTRA 333
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 556 bits (1434), Expect = e-159, Method: Compositional matrix adjust.
Identities = 268/315 (85%), Positives = 282/315 (89%), Gaps = 1/315 (0%)
Query: 25 FWNVSSYVI-FSDQDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXX 83
+W+ + + + +QDDYEVVRKVGRGKYSEVFEGINVN NE+C
Sbjct: 38 YWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREI 97
Query: 84 XXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLK 143
LQNL GGPN+VKLLDIVRDQHSKTPSLIFEYVN+TDFKVLYPTLTDYDIRYYIYELLK
Sbjct: 98 KILQNLXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLK 157
Query: 144 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 203
ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL
Sbjct: 158 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 217
Query: 204 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYH 263
LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD LNAYLNKY
Sbjct: 218 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNAYLNKYR 277
Query: 264 LELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHP 323
+ELDPQL+ALVGRHSRKPW KF+NADNQHLVSPEAIDFLDKLLRYDHQ+RLTA EAM HP
Sbjct: 278 IELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHP 337
Query: 324 YFAQVRAAESSRTRA 338
YF QVRAAE+SRTRA
Sbjct: 338 YFQQVRAAENSRTRA 352
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 555 bits (1429), Expect = e-158, Method: Compositional matrix adjust.
Identities = 267/315 (84%), Positives = 281/315 (89%), Gaps = 1/315 (0%)
Query: 25 FWNVSSYVI-FSDQDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXX 83
+W+ + + + +QDDYEVVRKVGRGKYSEVFEGINVN NE+C
Sbjct: 17 YWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREI 76
Query: 84 XXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLK 143
LQNL GGPN+VKLLDIVRDQHSKTPSLIFEYVN+TDFKVLYPTLTDYDIRYYIYELLK
Sbjct: 77 KILQNLXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLK 136
Query: 144 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 203
ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL
Sbjct: 137 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 196
Query: 204 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYH 263
LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD LN YLNKY
Sbjct: 197 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYR 256
Query: 264 LELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHP 323
+ELDPQL+ALVGRHSRKPW KF+NADNQHLVSPEAIDFLDKLLRYDHQ+RLTA EAM HP
Sbjct: 257 IELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHP 316
Query: 324 YFAQVRAAESSRTRA 338
YF QVRAAE+SRTRA
Sbjct: 317 YFQQVRAAENSRTRA 331
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 555 bits (1429), Expect = e-158, Method: Compositional matrix adjust.
Identities = 267/315 (84%), Positives = 281/315 (89%), Gaps = 1/315 (0%)
Query: 25 FWNVSSYVI-FSDQDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXX 83
+W+ + + + +QDDYEVVRKVGRGKYSEVFEGINVN NE+C
Sbjct: 18 YWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREI 77
Query: 84 XXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLK 143
LQNL GGPN+VKLLDIVRDQHSKTPSLIFEYVN+TDFKVLYPTLTDYDIRYYIYELLK
Sbjct: 78 KILQNLXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLK 137
Query: 144 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 203
ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL
Sbjct: 138 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 197
Query: 204 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYH 263
LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD LN YLNKY
Sbjct: 198 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYR 257
Query: 264 LELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHP 323
+ELDPQL+ALVGRHSRKPW KF+NADNQHLVSPEAIDFLDKLLRYDHQ+RLTA EAM HP
Sbjct: 258 IELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHP 317
Query: 324 YFAQVRAAESSRTRA 338
YF QVRAAE+SRTRA
Sbjct: 318 YFQQVRAAENSRTRA 332
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 550 bits (1416), Expect = e-157, Method: Compositional matrix adjust.
Identities = 264/311 (84%), Positives = 278/311 (89%), Gaps = 1/311 (0%)
Query: 25 FWNVSSYVI-FSDQDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXX 83
+W+ + + + +QDDYEVVRKVGRGKYSEVFEGINVN NE+C
Sbjct: 17 YWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREI 76
Query: 84 XXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLK 143
LQNLCGGPN+VKLLDIVRDQHSKTPSLIFEYVN+TDFKVLYPTLTDYDIRYYIYELLK
Sbjct: 77 KILQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLK 136
Query: 144 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 203
ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL
Sbjct: 137 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 196
Query: 204 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYH 263
LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD LN YLNKY
Sbjct: 197 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYR 256
Query: 264 LELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHP 323
+ELDPQL+ALVGRHSRKPW KF+NADNQHLVSPEAIDFLDKLLRYDHQ+RLTA EAM HP
Sbjct: 257 IELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHP 316
Query: 324 YFAQVRAAESS 334
YF QVRAAE+S
Sbjct: 317 YFQQVRAAENS 327
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 547 bits (1410), Expect = e-156, Method: Compositional matrix adjust.
Identities = 263/309 (85%), Positives = 276/309 (89%), Gaps = 1/309 (0%)
Query: 25 FWNVSSYVI-FSDQDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXX 83
+W+ + + + +QDDYEVVRKVGRGKYSEVFEGINVN NE+C
Sbjct: 17 YWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREI 76
Query: 84 XXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLK 143
LQNLCGGPN+VKLLDIVRDQHSKTPSLIFEYVN+TDFKVLYPTLTDYDIRYYIYELLK
Sbjct: 77 KILQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLK 136
Query: 144 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 203
ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL
Sbjct: 137 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 196
Query: 204 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYH 263
LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD LN YLNKY
Sbjct: 197 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYR 256
Query: 264 LELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHP 323
+ELDPQL+ALVGRHSRKPW KF+NADNQHLVSPEAIDFLDKLLRYDHQ+RLTA EAM HP
Sbjct: 257 IELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHP 316
Query: 324 YFAQVRAAE 332
YF QVRAAE
Sbjct: 317 YFQQVRAAE 325
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 546 bits (1407), Expect = e-156, Method: Compositional matrix adjust.
Identities = 263/311 (84%), Positives = 277/311 (89%), Gaps = 1/311 (0%)
Query: 25 FWNVSSYVI-FSDQDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXX 83
+W+ + + + +QDDYEVVRKVGRGKYSEVFEGINVN NE+C
Sbjct: 17 YWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREI 76
Query: 84 XXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLK 143
LQNL GGPN+VKLLDIVRDQHSKTPSLIFEYVN+TDFKVLYPTLTDYDIRYYIYELLK
Sbjct: 77 KILQNLXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLK 136
Query: 144 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 203
ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL
Sbjct: 137 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 196
Query: 204 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYH 263
LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD LN YLNKY
Sbjct: 197 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYR 256
Query: 264 LELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHP 323
+ELDPQL+ALVGRHSRKPW KF+NADNQHLVSPEAIDFLDKLLRYDHQ+RLTA EAM HP
Sbjct: 257 IELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHP 316
Query: 324 YFAQVRAAESS 334
YF QVRAAE+S
Sbjct: 317 YFQQVRAAENS 327
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 545 bits (1404), Expect = e-155, Method: Compositional matrix adjust.
Identities = 262/310 (84%), Positives = 276/310 (89%), Gaps = 1/310 (0%)
Query: 25 FWNVSSYVI-FSDQDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXX 83
+W+ + + + +QDDYEVVRKVGRGKYSEVFEGINVN NE+C
Sbjct: 17 YWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREI 76
Query: 84 XXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLK 143
LQNL GGPN+VKLLDIVRDQHSKTPSLIFEYVN+TDFKVLYPTLTDYDIRYYIYELLK
Sbjct: 77 KILQNLMGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLK 136
Query: 144 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 203
ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL
Sbjct: 137 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 196
Query: 204 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYH 263
LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD LN YLNKY
Sbjct: 197 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYR 256
Query: 264 LELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHP 323
+ELDPQL+ALVGRHSRKPW KF+NADNQHLVSPEAIDFLDKLLRYDHQ+RLTA EAM HP
Sbjct: 257 IELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHP 316
Query: 324 YFAQVRAAES 333
YF QVRAAE+
Sbjct: 317 YFQQVRAAEN 326
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 544 bits (1402), Expect = e-155, Method: Compositional matrix adjust.
Identities = 262/310 (84%), Positives = 276/310 (89%), Gaps = 1/310 (0%)
Query: 25 FWNVSSYVI-FSDQDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXX 83
+W+ + + + +QDDYEVVRKVGRGKYSEVFEGINVN NE+C
Sbjct: 17 YWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREI 76
Query: 84 XXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLK 143
LQNL GGPN+VKLLDIVRDQHSKTPSLIFEYVN+TDFKVLYPTLTDYDIRYYIYELLK
Sbjct: 77 KILQNLXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLK 136
Query: 144 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 203
ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL
Sbjct: 137 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 196
Query: 204 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYH 263
LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD LN YLNKY
Sbjct: 197 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYR 256
Query: 264 LELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHP 323
+ELDPQL+ALVGRHSRKPW KF+NADNQHLVSPEAIDFLDKLLRYDHQ+RLTA EAM HP
Sbjct: 257 IELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHP 316
Query: 324 YFAQVRAAES 333
YF QVRAAE+
Sbjct: 317 YFQQVRAAEN 326
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 456 bits (1172), Expect = e-128, Method: Compositional matrix adjust.
Identities = 212/305 (69%), Positives = 256/305 (83%), Gaps = 1/305 (0%)
Query: 25 FWNVSSYVI-FSDQDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXX 83
+W+ +S+V+ + +QDDY++VRK+GRGKYSEVFE IN+ NE+
Sbjct: 23 YWDYASHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKREI 82
Query: 84 XXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLK 143
L+NL GGPN++ L DIV+D S+TP+L+FE+VN+TDFK LY TLTDYDIR+Y+YE+LK
Sbjct: 83 KILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILK 142
Query: 144 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 203
ALDYCHS GIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHPG+EYNVRVASRYFKGPEL
Sbjct: 143 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
Query: 204 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYH 263
LVD Q YDYSLDMWSLGCM A MIFRKEPFF+GHDN+DQLV+IAKVLGT++L Y++KY+
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 262
Query: 264 LELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHP 323
+ELDP+ + ++GRHSRK W +F++++NQHLVSPEA+DFLDKLLRYDHQ RLTAREAM HP
Sbjct: 263 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 322
Query: 324 YFAQV 328
YF V
Sbjct: 323 YFYTV 327
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 452 bits (1162), Expect = e-127, Method: Compositional matrix adjust.
Identities = 213/311 (68%), Positives = 257/311 (82%), Gaps = 1/311 (0%)
Query: 25 FWNVSSYVI-FSDQDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXX 83
+W+ S+V+ + +QDDY++VRK+GRGKYSEVFE IN+ NE+
Sbjct: 23 YWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREI 82
Query: 84 XXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLK 143
L+NL GGPN++ L DIV+D S+TP+L+FE+VN+TDFK LY TLTDYDIR+Y+YE+LK
Sbjct: 83 KILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILK 142
Query: 144 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 203
ALDYCHS GIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHPG+EYNVRVASRYFKGPEL
Sbjct: 143 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
Query: 204 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYH 263
LVD Q YDYSLDMWSLGCM A MIFRKEPFF+GHDN+DQLV+IAKVLGT++L Y++KY+
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 262
Query: 264 LELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHP 323
+ELDP+ + ++GRHSRK W +F++++NQHLVSPEA+DFLDKLLRYDHQ RLTAREAM HP
Sbjct: 263 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 322
Query: 324 YFAQVRAAESS 334
YF V +S
Sbjct: 323 YFYPVVKEQSQ 333
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 452 bits (1162), Expect = e-127, Method: Compositional matrix adjust.
Identities = 211/305 (69%), Positives = 255/305 (83%), Gaps = 1/305 (0%)
Query: 25 FWNVSSYVI-FSDQDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXX 83
+W+ S+V+ + +QDDY++VRK+GRGKYSEVFE IN+ NE+
Sbjct: 23 YWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVAVKILKPVKKKKIKREI 82
Query: 84 XXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLK 143
L+NL GGPN++ L DIV+D S+TP+L+FE+VN+TDFK LY TLTDYDIR+Y+YE+LK
Sbjct: 83 KILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILK 142
Query: 144 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 203
ALDYCHS GIMHRDVKPHNV+IDHE RKLRLIDWGLAEFYHPG+EYNVRVASRYFKGPEL
Sbjct: 143 ALDYCHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
Query: 204 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYH 263
LVD Q YDYSLDMWSLGCM A MIFRKEPFF+GHDN+DQLV+IAKVLGT++L Y++KY+
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 262
Query: 264 LELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHP 323
+ELDP+ + ++GRHSRK W +F++++NQHLVSPEA+DFLDKLLRYDHQ RLTAREAM HP
Sbjct: 263 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 322
Query: 324 YFAQV 328
YF V
Sbjct: 323 YFYTV 327
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 451 bits (1161), Expect = e-127, Method: Compositional matrix adjust.
Identities = 212/305 (69%), Positives = 255/305 (83%), Gaps = 1/305 (0%)
Query: 25 FWNVSSYVI-FSDQDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXX 83
+W+ S+V+ + +QDDY++VRK+GRGKYSEVFE IN+ NE+
Sbjct: 23 YWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREI 82
Query: 84 XXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLK 143
L+NL GGPN++ L DIV+D S+TP+L+FE+VN+TDFK LY TLTDYDIR+Y+YE+LK
Sbjct: 83 KILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILK 142
Query: 144 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 203
ALDYCHS GIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHPG+EYNVRVASRYFKGPEL
Sbjct: 143 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
Query: 204 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYH 263
LVD Q YDYSLDMWSLGCM A MIFRKEPFF+GHDN+DQLV+IAKVLGT++L Y++KY+
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 262
Query: 264 LELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHP 323
+ELDP+ + ++GRHSRK W +F++++NQHLVSPEA+DFLDKLLRYDHQ RLTAREAM HP
Sbjct: 263 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 322
Query: 324 YFAQV 328
YF V
Sbjct: 323 YFYTV 327
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 451 bits (1161), Expect = e-127, Method: Compositional matrix adjust.
Identities = 212/305 (69%), Positives = 255/305 (83%), Gaps = 1/305 (0%)
Query: 25 FWNVSSYVI-FSDQDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXX 83
+W+ S+V+ + +QDDY++VRK+GRGKYSEVFE IN+ NE+
Sbjct: 23 YWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREI 82
Query: 84 XXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLK 143
L+NL GGPN++ L DIV+D S+TP+L+FE+VN+TDFK LY TLTDYDIR+Y+YE+LK
Sbjct: 83 KILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILK 142
Query: 144 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 203
ALDYCHS GIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHPG+EYNVRVASRYFKGPEL
Sbjct: 143 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
Query: 204 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYH 263
LVD Q YDYSLDMWSLGCM A MIFRKEPFF+GHDN+DQLV+IAKVLGT++L Y++KY+
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 262
Query: 264 LELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHP 323
+ELDP+ + ++GRHSRK W +F++++NQHLVSPEA+DFLDKLLRYDHQ RLTAREAM HP
Sbjct: 263 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 322
Query: 324 YFAQV 328
YF V
Sbjct: 323 YFYTV 327
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 451 bits (1161), Expect = e-127, Method: Compositional matrix adjust.
Identities = 212/305 (69%), Positives = 255/305 (83%), Gaps = 1/305 (0%)
Query: 25 FWNVSSYVI-FSDQDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXX 83
+W+ S+V+ + +QDDY++VRK+GRGKYSEVFE IN+ NE+
Sbjct: 23 YWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREI 82
Query: 84 XXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLK 143
L+NL GGPN++ L DIV+D S+TP+L+FE+VN+TDFK LY TLTDYDIR+Y+YE+LK
Sbjct: 83 KILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILK 142
Query: 144 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 203
ALDYCHS GIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHPG+EYNVRVASRYFKGPEL
Sbjct: 143 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
Query: 204 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYH 263
LVD Q YDYSLDMWSLGCM A MIFRKEPFF+GHDN+DQLV+IAKVLGT++L Y++KY+
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 262
Query: 264 LELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHP 323
+ELDP+ + ++GRHSRK W +F++++NQHLVSPEA+DFLDKLLRYDHQ RLTAREAM HP
Sbjct: 263 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 322
Query: 324 YFAQV 328
YF V
Sbjct: 323 YFYTV 327
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 451 bits (1161), Expect = e-127, Method: Compositional matrix adjust.
Identities = 212/305 (69%), Positives = 255/305 (83%), Gaps = 1/305 (0%)
Query: 25 FWNVSSYVI-FSDQDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXX 83
+W+ S+V+ + +QDDY++VRK+GRGKYSEVFE IN+ NE+
Sbjct: 23 YWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREI 82
Query: 84 XXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLK 143
L+NL GGPN++ L DIV+D S+TP+L+FE+VN+TDFK LY TLTDYDIR+Y+YE+LK
Sbjct: 83 KILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILK 142
Query: 144 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 203
ALDYCHS GIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHPG+EYNVRVASRYFKGPEL
Sbjct: 143 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
Query: 204 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYH 263
LVD Q YDYSLDMWSLGCM A MIFRKEPFF+GHDN+DQLV+IAKVLGT++L Y++KY+
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 262
Query: 264 LELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHP 323
+ELDP+ + ++GRHSRK W +F++++NQHLVSPEA+DFLDKLLRYDHQ RLTAREAM HP
Sbjct: 263 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 322
Query: 324 YFAQV 328
YF V
Sbjct: 323 YFYTV 327
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 451 bits (1160), Expect = e-127, Method: Compositional matrix adjust.
Identities = 212/305 (69%), Positives = 255/305 (83%), Gaps = 1/305 (0%)
Query: 25 FWNVSSYVI-FSDQDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXX 83
+W+ S+V+ + +QDDY++VRK+GRGKYSEVFE IN+ NE+
Sbjct: 23 YWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREI 82
Query: 84 XXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLK 143
L+NL GGPN++ L DIV+D S+TP+L+FE+VN+TDFK LY TLTDYDIR+Y+YE+LK
Sbjct: 83 KILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILK 142
Query: 144 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 203
ALDYCHS GIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHPG+EYNVRVASRYFKGPEL
Sbjct: 143 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
Query: 204 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYH 263
LVD Q YDYSLDMWSLGCM A MIFRKEPFF+GHDN+DQLV+IAKVLGT++L Y++KY+
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 262
Query: 264 LELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHP 323
+ELDP+ + ++GRHSRK W +F++++NQHLVSPEA+DFLDKLLRYDHQ RLTAREAM HP
Sbjct: 263 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 322
Query: 324 YFAQV 328
YF V
Sbjct: 323 YFYTV 327
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 451 bits (1160), Expect = e-127, Method: Compositional matrix adjust.
Identities = 212/305 (69%), Positives = 255/305 (83%), Gaps = 1/305 (0%)
Query: 25 FWNVSSYVI-FSDQDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXX 83
+W+ S+V+ + +QDDY++VRK+GRGKYSEVFE IN+ NE+
Sbjct: 22 YWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREI 81
Query: 84 XXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLK 143
L+NL GGPN++ L DIV+D S+TP+L+FE+VN+TDFK LY TLTDYDIR+Y+YE+LK
Sbjct: 82 KILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILK 141
Query: 144 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 203
ALDYCHS GIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHPG+EYNVRVASRYFKGPEL
Sbjct: 142 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 201
Query: 204 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYH 263
LVD Q YDYSLDMWSLGCM A MIFRKEPFF+GHDN+DQLV+IAKVLGT++L Y++KY+
Sbjct: 202 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 261
Query: 264 LELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHP 323
+ELDP+ + ++GRHSRK W +F++++NQHLVSPEA+DFLDKLLRYDHQ RLTAREAM HP
Sbjct: 262 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 321
Query: 324 YFAQV 328
YF V
Sbjct: 322 YFYTV 326
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 451 bits (1160), Expect = e-127, Method: Compositional matrix adjust.
Identities = 212/305 (69%), Positives = 255/305 (83%), Gaps = 1/305 (0%)
Query: 25 FWNVSSYVI-FSDQDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXX 83
+W+ S+V+ + +QDDY++VRK+GRGKYSEVFE IN+ NE+
Sbjct: 23 YWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREI 82
Query: 84 XXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLK 143
L+NL GGPN++ L DIV+D S+TP+L+FE+VN+TDFK LY TLTDYDIR+Y+YE+LK
Sbjct: 83 KILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILK 142
Query: 144 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 203
ALDYCHS GIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHPG+EYNVRVASRYFKGPEL
Sbjct: 143 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
Query: 204 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYH 263
LVD Q YDYSLDMWSLGCM A MIFRKEPFF+GHDN+DQLV+IAKVLGT++L Y++KY+
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 262
Query: 264 LELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHP 323
+ELDP+ + ++GRHSRK W +F++++NQHLVSPEA+DFLDKLLRYDHQ RLTAREAM HP
Sbjct: 263 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 322
Query: 324 YFAQV 328
YF V
Sbjct: 323 YFYTV 327
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 451 bits (1160), Expect = e-127, Method: Compositional matrix adjust.
Identities = 212/305 (69%), Positives = 255/305 (83%), Gaps = 1/305 (0%)
Query: 25 FWNVSSYVI-FSDQDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXX 83
+W+ S+V+ + +QDDY++VRK+GRGKYSEVFE IN+ NE+
Sbjct: 28 YWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREI 87
Query: 84 XXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLK 143
L+NL GGPN++ L DIV+D S+TP+L+FE+VN+TDFK LY TLTDYDIR+Y+YE+LK
Sbjct: 88 KILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILK 147
Query: 144 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 203
ALDYCHS GIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHPG+EYNVRVASRYFKGPEL
Sbjct: 148 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 207
Query: 204 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYH 263
LVD Q YDYSLDMWSLGCM A MIFRKEPFF+GHDN+DQLV+IAKVLGT++L Y++KY+
Sbjct: 208 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 267
Query: 264 LELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHP 323
+ELDP+ + ++GRHSRK W +F++++NQHLVSPEA+DFLDKLLRYDHQ RLTAREAM HP
Sbjct: 268 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 327
Query: 324 YFAQV 328
YF V
Sbjct: 328 YFYTV 332
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 451 bits (1160), Expect = e-127, Method: Compositional matrix adjust.
Identities = 212/305 (69%), Positives = 255/305 (83%), Gaps = 1/305 (0%)
Query: 25 FWNVSSYVI-FSDQDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXX 83
+W+ S+V+ + +QDDY++VRK+GRGKYSEVFE IN+ NE+
Sbjct: 23 YWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREI 82
Query: 84 XXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLK 143
L+NL GGPN++ L DIV+D S+TP+L+FE+VN+TDFK LY TLTDYDIR+Y+YE+LK
Sbjct: 83 KILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILK 142
Query: 144 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 203
ALDYCHS GIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHPG+EYNVRVASRYFKGPEL
Sbjct: 143 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
Query: 204 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYH 263
LVD Q YDYSLDMWSLGCM A MIFRKEPFF+GHDN+DQLV+IAKVLGT++L Y++KY+
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 262
Query: 264 LELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHP 323
+ELDP+ + ++GRHSRK W +F++++NQHLVSPEA+DFLDKLLRYDHQ RLTAREAM HP
Sbjct: 263 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 322
Query: 324 YFAQV 328
YF V
Sbjct: 323 YFYTV 327
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 451 bits (1159), Expect = e-127, Method: Compositional matrix adjust.
Identities = 212/305 (69%), Positives = 255/305 (83%), Gaps = 1/305 (0%)
Query: 25 FWNVSSYVI-FSDQDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXX 83
+W+ S+V+ + +QDDY++VRK+GRGKYSEVFE IN+ NE+
Sbjct: 22 YWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREI 81
Query: 84 XXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLK 143
L+NL GGPN++ L DIV+D S+TP+L+FE+VN+TDFK LY TLTDYDIR+Y+YE+LK
Sbjct: 82 KILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILK 141
Query: 144 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 203
ALDYCHS GIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHPG+EYNVRVASRYFKGPEL
Sbjct: 142 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 201
Query: 204 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYH 263
LVD Q YDYSLDMWSLGCM A MIFRKEPFF+GHDN+DQLV+IAKVLGT++L Y++KY+
Sbjct: 202 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 261
Query: 264 LELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHP 323
+ELDP+ + ++GRHSRK W +F++++NQHLVSPEA+DFLDKLLRYDHQ RLTAREAM HP
Sbjct: 262 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 321
Query: 324 YFAQV 328
YF V
Sbjct: 322 YFYTV 326
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 451 bits (1159), Expect = e-127, Method: Compositional matrix adjust.
Identities = 212/305 (69%), Positives = 255/305 (83%), Gaps = 1/305 (0%)
Query: 25 FWNVSSYVI-FSDQDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXX 83
+W+ S+V+ + +QDDY++VRK+GRGKYSEVFE IN+ NE+
Sbjct: 21 YWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREI 80
Query: 84 XXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLK 143
L+NL GGPN++ L DIV+D S+TP+L+FE+VN+TDFK LY TLTDYDIR+Y+YE+LK
Sbjct: 81 KILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILK 140
Query: 144 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 203
ALDYCHS GIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHPG+EYNVRVASRYFKGPEL
Sbjct: 141 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 200
Query: 204 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYH 263
LVD Q YDYSLDMWSLGCM A MIFRKEPFF+GHDN+DQLV+IAKVLGT++L Y++KY+
Sbjct: 201 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 260
Query: 264 LELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHP 323
+ELDP+ + ++GRHSRK W +F++++NQHLVSPEA+DFLDKLLRYDHQ RLTAREAM HP
Sbjct: 261 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 320
Query: 324 YFAQV 328
YF V
Sbjct: 321 YFYTV 325
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 448 bits (1152), Expect = e-126, Method: Compositional matrix adjust.
Identities = 211/305 (69%), Positives = 254/305 (83%), Gaps = 1/305 (0%)
Query: 25 FWNVSSYVI-FSDQDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXX 83
+W+ S+V+ + +QDDY++VRK+GRGKYSEVFE IN+ NE+
Sbjct: 23 YWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREI 82
Query: 84 XXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLK 143
L+NL GGPN++ L DIV+D S+TP+L+FE+VN+TDFK L TLTDYDIR+Y+YE+LK
Sbjct: 83 KILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLRQTLTDYDIRFYMYEILK 142
Query: 144 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 203
ALDYCHS GIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHPG+EYNVRVASRYFKGPEL
Sbjct: 143 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
Query: 204 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYH 263
LVD Q YDYSLDMWSLGCM A MIFRKEPFF+GHDN+DQLV+IAKVLGT++L Y++KY+
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 262
Query: 264 LELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHP 323
+ELDP+ + ++GRHSRK W +F++++NQHLVSPEA+DFLDKLLRYDHQ RLTAREAM HP
Sbjct: 263 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 322
Query: 324 YFAQV 328
YF V
Sbjct: 323 YFYTV 327
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 441 bits (1133), Expect = e-124, Method: Compositional matrix adjust.
Identities = 206/311 (66%), Positives = 250/311 (80%), Gaps = 1/311 (0%)
Query: 25 FWNVSSYV-IFSDQDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXX 83
+W+ ++V + +QDDY++VRK+GRGKYSEVFE IN+ NER
Sbjct: 24 YWDYEAHVPSWGNQDDYQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVKKKKIKREV 83
Query: 84 XXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLK 143
L+NL GG N++KL+D V+D SKTP+L+FEY+N+TDFK LY LTD+DIR+Y+YELLK
Sbjct: 84 KILENLRGGTNIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQILTDFDIRFYMYELLK 143
Query: 144 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 203
ALDYCHS+GIMHRDVKPHNVMIDH+ +KLRLIDWGLAEFYHP +EYNVRVASRYFKGPEL
Sbjct: 144 ALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPEL 203
Query: 204 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYH 263
LVD Q YDYSLDMWSLGCM A MIFR+EPFF+G DN+DQLV+IAKVLGT+EL YL KYH
Sbjct: 204 LVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYH 263
Query: 264 LELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHP 323
++LDP + ++G+HSRK W FI+++N+HLVSPEA+D LDKLLRYDHQ RLTA+EAM HP
Sbjct: 264 IDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHP 323
Query: 324 YFAQVRAAESS 334
YF V +S
Sbjct: 324 YFYPVVKEQSQ 334
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 439 bits (1129), Expect = e-123, Method: Compositional matrix adjust.
Identities = 206/311 (66%), Positives = 250/311 (80%), Gaps = 1/311 (0%)
Query: 25 FWNVSSYV-IFSDQDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXX 83
+W+ ++V + +QDDY++VRK+GRGKYSEVFE IN+ NER
Sbjct: 29 YWDYEAHVPSWGNQDDYQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVKKKKIKREV 88
Query: 84 XXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLK 143
L+NL GG N++KL+D V+D SKTP+L+FEY+N+TDFK LY LTD+DIR+Y+YELLK
Sbjct: 89 KILENLRGGTNIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQILTDFDIRFYMYELLK 148
Query: 144 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 203
ALDYCHS+GIMHRDVKPHNVMIDH+ +KLRLIDWGLAEFYHP +EYNVRVASRYFKGPEL
Sbjct: 149 ALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPEL 208
Query: 204 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYH 263
LVD Q YDYSLDMWSLGCM A MIFR+EPFF+G DN+DQLV+IAKVLGT+EL YL KYH
Sbjct: 209 LVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYH 268
Query: 264 LELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHP 323
++LDP + ++G+HSRK W FI+++N+HLVSPEA+D LDKLLRYDHQ RLTA+EAM HP
Sbjct: 269 IDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHP 328
Query: 324 YFAQVRAAESS 334
YF V +S
Sbjct: 329 YFYPVVKEQSQ 339
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 148 bits (374), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 99/296 (33%), Positives = 151/296 (51%), Gaps = 20/296 (6%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTN----ERCXXXXXXXXXXXXXXXXXXXLQNLCGGP 93
+ Y+ + KVG G Y V++ + +R L+ L P
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKEL-HHP 79
Query: 94 NVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL---YPTLTDYDIRYYIYELLKALDYCHS 150
N+V L+D++ + T L+FE++ KVL L D I+ Y+Y+LL+ + +CH
Sbjct: 80 NIVSLIDVIHSERCLT--LVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQ 137
Query: 151 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQD 209
I+HRD+KP N++I+ + L+L D+GLA F P + Y V + +++ P++L+ +
Sbjct: 138 HRILHRDLKPQNLLINSD-GALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKK 196
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
Y S+D+WS+GC+FA MI K P F G + DQL KI +LGT + L L Q
Sbjct: 197 YSTSVDIWSIGCIFAEMITGK-PLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQ 255
Query: 270 LDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 325
V +KPWS I Q E ID L +L +D R++AR+AM HPYF
Sbjct: 256 RTFQV--FEKKPWSSIIPGFCQ-----EGIDLLSNMLCFDPNKRISARDAMNHPYF 304
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 148 bits (373), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 99/296 (33%), Positives = 151/296 (51%), Gaps = 20/296 (6%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTN----ERCXXXXXXXXXXXXXXXXXXXLQNLCGGP 93
+ Y+ + KVG G Y V++ + +R L+ L P
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKEL-HHP 79
Query: 94 NVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL---YPTLTDYDIRYYIYELLKALDYCHS 150
N+V L+D++ + T L+FE++ KVL L D I+ Y+Y+LL+ + +CH
Sbjct: 80 NIVSLIDVIHSERCLT--LVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQ 137
Query: 151 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQD 209
I+HRD+KP N++I+ + L+L D+GLA F P + Y V + +++ P++L+ +
Sbjct: 138 HRILHRDLKPQNLLINSD-GALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKK 196
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
Y S+D+WS+GC+FA MI K P F G + DQL KI +LGT + L L Q
Sbjct: 197 YSTSVDIWSIGCIFAEMITGK-PLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQ 255
Query: 270 LDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 325
V +KPWS I Q E ID L +L +D R++AR+AM HPYF
Sbjct: 256 RTFQV--FEKKPWSSIIPGFCQ-----EGIDLLSNMLCFDPNKRISARDAMNHPYF 304
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 144 bits (363), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 129/232 (55%), Gaps = 21/232 (9%)
Query: 111 SLIFEYVNSTDFKV------LYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVM 164
+L+ EYV T ++ L T+ I+ Y+Y+LL++L Y HS GI HRD+KP N++
Sbjct: 114 NLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLL 173
Query: 165 IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFA 224
+D L+LID+G A+ G+ + SRY++ PEL+ +Y ++D+WS GC+ A
Sbjct: 174 LDPPSGVLKLIDFGSAKILIAGEPNVSXICSRYYRAPELIFGATNYTTNIDIWSTGCVMA 233
Query: 225 GMIFRKEPFFYGHDNHDQLVKIAKVLGTD--ELNAYLNKYHLELD-PQLDALVGRHSRKP 281
++ + +P F G DQLV+I KVLGT E +N ++E PQ+ P
Sbjct: 234 ELM-QGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRP-------HP 285
Query: 282 WSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQVRAAES 333
+SK P+AID + +LL Y RLTA EA+ HP+F ++R E+
Sbjct: 286 FSKVFRPRT----PPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRTGEA 333
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 85/246 (34%), Positives = 135/246 (54%), Gaps = 21/246 (8%)
Query: 101 IVRDQHSKTPSLIFEYVNSTDFKVLYP------TLTDYDIRYYIYELLKALDYCHSQGIM 154
IV +K ++I EYV T KVL ++ I YIY+L +A+ + HS GI
Sbjct: 104 IVNPSQNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGIC 163
Query: 155 HRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSL 214
HRD+KP N++++ + L+L D+G A+ P + + SR+++ PEL++ +Y S+
Sbjct: 164 HRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSI 223
Query: 215 DMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG--TDELNAYLNKYHLELD-PQLD 271
D+WS+GC+F +I K P F G + DQLV+I +++G T E +N ++ E+ P L
Sbjct: 224 DLWSIGCVFGELILGK-PLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLK 282
Query: 272 ALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQVRAA 331
A K W K + L AID L+++LRY+ R+ EAMAHP+F +R +
Sbjct: 283 A-------KDWRKILPEGTPSL----AIDLLEQILRYEPDLRINPYEAMAHPFFDHLRNS 331
Query: 332 ESSRTR 337
S +
Sbjct: 332 YESEVK 337
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 121/228 (53%), Gaps = 21/228 (9%)
Query: 111 SLIFEYVNSTDFKVL------YPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVM 164
+L+ +YV T ++V TL ++ Y+Y+L ++L Y HS GI HRD+KP N++
Sbjct: 129 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 188
Query: 165 IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFA 224
+D + L+L D+G A+ G+ + SRY++ PEL+ DY S+D+WS GC+ A
Sbjct: 189 LDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLA 248
Query: 225 GMIFRKEPFFYGHDNHDQLVKIAKVLGTD--ELNAYLNKYHLELD-PQLDALVGRHSRKP 281
++ +P F G DQLV+I KVLGT E +N + E PQ+ A P
Sbjct: 249 ELLL-GQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKA-------HP 300
Query: 282 WSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQVR 329
W+K PEAI +LL Y RLT EA AH +F ++R
Sbjct: 301 WTKVFRPRT----PPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 344
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 122/231 (52%), Gaps = 27/231 (11%)
Query: 111 SLIFEYVNSTDFKVL------YPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVM 164
+L+ +YV +T ++V TL ++ Y+Y+L ++L Y HS GI HRD+KP N++
Sbjct: 95 NLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 154
Query: 165 IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFA 224
+D + L+L D+G A+ G+ + SRY++ PEL+ DY S+D+WS GC+ A
Sbjct: 155 LDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLA 214
Query: 225 GMIFRKEPFFYGHDNHDQLVKIAKVLGTD------ELNAYLNKYHLELDPQLDALVGRHS 278
++ +P F G DQLV+I KVLGT E+N ++ PQ+ A
Sbjct: 215 ELLL-GQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFAF---PQIKA------ 264
Query: 279 RKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQVR 329
PW+K PEAI +LL Y RLT EA AH +F ++R
Sbjct: 265 -HPWTKVFRPRT----PPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 310
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 121/228 (53%), Gaps = 21/228 (9%)
Query: 111 SLIFEYVNSTDFKVL------YPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVM 164
+L+ +YV T ++V TL ++ Y+Y+L ++L Y HS GI HRD+KP N++
Sbjct: 107 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 166
Query: 165 IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFA 224
+D + L+L D+G A+ G+ + SRY++ PEL+ DY S+D+WS GC+ A
Sbjct: 167 LDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLA 226
Query: 225 GMIFRKEPFFYGHDNHDQLVKIAKVLGTD--ELNAYLNKYHLELD-PQLDALVGRHSRKP 281
++ +P F G DQLV+I KVLGT E +N + E PQ+ A P
Sbjct: 227 ELLL-GQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKA-------HP 278
Query: 282 WSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQVR 329
W+K PEAI +LL Y RLT EA AH +F ++R
Sbjct: 279 WTKVFRPRT----PPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 322
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 121/228 (53%), Gaps = 21/228 (9%)
Query: 111 SLIFEYVNSTDFKVL------YPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVM 164
+L+ +YV T ++V TL ++ Y+Y+L ++L Y HS GI HRD+KP N++
Sbjct: 114 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 173
Query: 165 IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFA 224
+D + L+L D+G A+ G+ + SRY++ PEL+ DY S+D+WS GC+ A
Sbjct: 174 LDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLA 233
Query: 225 GMIFRKEPFFYGHDNHDQLVKIAKVLGTD--ELNAYLNKYHLELD-PQLDALVGRHSRKP 281
++ +P F G DQLV+I KVLGT E +N + E PQ+ A P
Sbjct: 234 ELLL-GQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKA-------HP 285
Query: 282 WSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQVR 329
W+K PEAI +LL Y RLT EA AH +F ++R
Sbjct: 286 WTKVFRPRT----PPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 329
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 121/228 (53%), Gaps = 21/228 (9%)
Query: 111 SLIFEYVNSTDFKVL------YPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVM 164
+L+ +YV T ++V TL ++ Y+Y+L ++L Y HS GI HRD+KP N++
Sbjct: 95 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 154
Query: 165 IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFA 224
+D + L+L D+G A+ G+ + SRY++ PEL+ DY S+D+WS GC+ A
Sbjct: 155 LDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLA 214
Query: 225 GMIFRKEPFFYGHDNHDQLVKIAKVLGTD--ELNAYLNKYHLELD-PQLDALVGRHSRKP 281
++ +P F G DQLV+I KVLGT E +N + E PQ+ A P
Sbjct: 215 ELLL-GQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKA-------HP 266
Query: 282 WSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQVR 329
W+K PEAI +LL Y RLT EA AH +F ++R
Sbjct: 267 WTKVFRPRT----PPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 310
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 121/228 (53%), Gaps = 21/228 (9%)
Query: 111 SLIFEYVNSTDFKVL------YPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVM 164
+L+ +YV T ++V TL ++ Y+Y+L ++L Y HS GI HRD+KP N++
Sbjct: 103 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 162
Query: 165 IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFA 224
+D + L+L D+G A+ G+ + SRY++ PEL+ DY S+D+WS GC+ A
Sbjct: 163 LDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLA 222
Query: 225 GMIFRKEPFFYGHDNHDQLVKIAKVLGTD--ELNAYLNKYHLELD-PQLDALVGRHSRKP 281
++ +P F G DQLV+I KVLGT E +N + E PQ+ A P
Sbjct: 223 ELLL-GQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKA-------HP 274
Query: 282 WSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQVR 329
W+K PEAI +LL Y RLT EA AH +F ++R
Sbjct: 275 WTKVFRPRT----PPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 318
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 135 bits (339), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 121/228 (53%), Gaps = 21/228 (9%)
Query: 111 SLIFEYVNSTDFKVL------YPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVM 164
+L+ +YV T ++V TL ++ Y+Y+L ++L Y HS GI HRD+KP N++
Sbjct: 107 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 166
Query: 165 IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFA 224
+D + L+L D+G A+ G+ + SRY++ PEL+ DY S+D+WS GC+ A
Sbjct: 167 LDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLA 226
Query: 225 GMIFRKEPFFYGHDNHDQLVKIAKVLGTD--ELNAYLNKYHLELD-PQLDALVGRHSRKP 281
++ +P F G DQLV+I KVLGT E +N + E PQ+ A P
Sbjct: 227 ELLL-GQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKA-------HP 278
Query: 282 WSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQVR 329
W+K PEAI +LL Y RLT EA AH +F ++R
Sbjct: 279 WTKVFRPRT----PPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 322
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 135 bits (339), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 121/228 (53%), Gaps = 21/228 (9%)
Query: 111 SLIFEYVNSTDFKVL------YPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVM 164
+L+ +YV T ++V TL ++ Y+Y+L ++L Y HS GI HRD+KP N++
Sbjct: 96 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 155
Query: 165 IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFA 224
+D + L+L D+G A+ G+ + SRY++ PEL+ DY S+D+WS GC+ A
Sbjct: 156 LDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLA 215
Query: 225 GMIFRKEPFFYGHDNHDQLVKIAKVLGTD--ELNAYLNKYHLELD-PQLDALVGRHSRKP 281
++ +P F G DQLV+I KVLGT E +N + E PQ+ A P
Sbjct: 216 ELLL-GQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKA-------HP 267
Query: 282 WSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQVR 329
W+K PEAI +LL Y RLT EA AH +F ++R
Sbjct: 268 WTKVFRPRT----PPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 311
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 135 bits (339), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 121/228 (53%), Gaps = 21/228 (9%)
Query: 111 SLIFEYVNSTDFKVL------YPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVM 164
+L+ +YV T ++V TL ++ Y+Y+L ++L Y HS GI HRD+KP N++
Sbjct: 99 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 158
Query: 165 IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFA 224
+D + L+L D+G A+ G+ + SRY++ PEL+ DY S+D+WS GC+ A
Sbjct: 159 LDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLA 218
Query: 225 GMIFRKEPFFYGHDNHDQLVKIAKVLGTD--ELNAYLNKYHLELD-PQLDALVGRHSRKP 281
++ +P F G DQLV+I KVLGT E +N + E PQ+ A P
Sbjct: 219 ELLL-GQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKA-------HP 270
Query: 282 WSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQVR 329
W+K PEAI +LL Y RLT EA AH +F ++R
Sbjct: 271 WTKVFRPRT----PPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 314
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 134 bits (338), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 121/228 (53%), Gaps = 21/228 (9%)
Query: 111 SLIFEYVNSTDFKVL------YPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVM 164
+L+ +YV T ++V TL ++ Y+Y+L ++L Y HS GI HRD+KP N++
Sbjct: 95 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 154
Query: 165 IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFA 224
+D + L+L D+G A+ G+ + SRY++ PEL+ DY S+D+WS GC+ A
Sbjct: 155 LDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLA 214
Query: 225 GMIFRKEPFFYGHDNHDQLVKIAKVLGTD--ELNAYLNKYHLELD-PQLDALVGRHSRKP 281
++ +P F G DQLV+I KVLGT E +N + E PQ+ A P
Sbjct: 215 ELLL-GQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKA-------HP 266
Query: 282 WSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQVR 329
W+K PEAI +LL Y RLT EA AH +F ++R
Sbjct: 267 WTKVFRPRT----PPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 310
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 134 bits (338), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 121/228 (53%), Gaps = 21/228 (9%)
Query: 111 SLIFEYVNSTDFKVL------YPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVM 164
+L+ +YV T ++V TL ++ Y+Y+L ++L Y HS GI HRD+KP N++
Sbjct: 95 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 154
Query: 165 IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFA 224
+D + L+L D+G A+ G+ + SRY++ PEL+ DY S+D+WS GC+ A
Sbjct: 155 LDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLA 214
Query: 225 GMIFRKEPFFYGHDNHDQLVKIAKVLGTD--ELNAYLNKYHLELD-PQLDALVGRHSRKP 281
++ +P F G DQLV+I KVLGT E +N + E PQ+ A P
Sbjct: 215 ELLL-GQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKA-------HP 266
Query: 282 WSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQVR 329
W+K PEAI +LL Y RLT EA AH +F ++R
Sbjct: 267 WTKVFRPRT----PPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 310
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 134 bits (338), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 122/228 (53%), Gaps = 21/228 (9%)
Query: 111 SLIFEYVNSTDFKVL------YPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVM 164
+L+ +YV T ++V TL ++ Y+Y+L ++L Y HS GI HRD+KP N++
Sbjct: 123 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 182
Query: 165 IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFA 224
+D + L+L D+G A+ G+ + SRY++ PEL+ DY S+D+WS GC+ A
Sbjct: 183 LDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLA 242
Query: 225 GMIFRKEPFFYGHDNHDQLVKIAKVLGTD--ELNAYLNKYHLELD-PQLDALVGRHSRKP 281
++ +P F G DQLV+I KVLGT E +N + E PQ+ A P
Sbjct: 243 ELLL-GQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKA-------HP 294
Query: 282 WSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQVR 329
W+K + PEAI +LL Y RLT EA AH +F ++R
Sbjct: 295 WTKVF----RPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 338
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 134 bits (338), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 155/302 (51%), Gaps = 21/302 (6%)
Query: 36 DQDDYEVVRKVGRGKYSEVFEGINVNTNE----RCXXXXXXXXXXXXXXXXXXXLQNLCG 91
D ++++ V K+G G Y V++ N T E + L
Sbjct: 5 DMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 92 GPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL-YPTLTDYD---IRYYIYELLKALDY 147
PN+VKLLD++ ++ L+FE+++ K + LT I+ Y+++LL+ L +
Sbjct: 65 HPNIVKLLDVIHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 122
Query: 148 CHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVD 206
CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L+
Sbjct: 123 CHSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 181
Query: 207 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLEL 266
+ Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT + + +
Sbjct: 182 CKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM-- 238
Query: 267 DPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFA 326
P + +R+ +SK + ++ + L ++L YD R++A+ A+AHP+F
Sbjct: 239 -PDYKPSFPKWARQDFSKVVPPLDE-----DGRSLLSQMLHYDPNKRISAKAALAHPFFQ 292
Query: 327 QV 328
V
Sbjct: 293 DV 294
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 134 bits (338), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 122/228 (53%), Gaps = 21/228 (9%)
Query: 111 SLIFEYVNSTDFKVL------YPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVM 164
+L+ +YV T ++V TL ++ Y+Y+L ++L Y HS GI HRD+KP N++
Sbjct: 133 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 192
Query: 165 IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFA 224
+D + L+L D+G A+ G+ + SRY++ PEL+ DY S+D+WS GC+ A
Sbjct: 193 LDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLA 252
Query: 225 GMIFRKEPFFYGHDNHDQLVKIAKVLGTD--ELNAYLNKYHLELD-PQLDALVGRHSRKP 281
++ +P F G DQLV+I KVLGT E +N + E PQ+ A P
Sbjct: 253 ELLL-GQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKA-------HP 304
Query: 282 WSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQVR 329
W+K + PEAI +LL Y RLT EA AH +F ++R
Sbjct: 305 WTKVF----RPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 348
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 134 bits (338), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 121/228 (53%), Gaps = 21/228 (9%)
Query: 111 SLIFEYVNSTDFKVL------YPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVM 164
+L+ +YV T ++V TL ++ Y+Y+L ++L Y HS GI HRD+KP N++
Sbjct: 129 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 188
Query: 165 IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFA 224
+D + L+L D+G A+ G+ + SRY++ PEL+ DY S+D+WS GC+ A
Sbjct: 189 LDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLA 248
Query: 225 GMIFRKEPFFYGHDNHDQLVKIAKVLGTD--ELNAYLNKYHLELD-PQLDALVGRHSRKP 281
++ +P F G DQLV+I KVLGT E +N + E PQ+ A P
Sbjct: 249 ELLL-GQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKA-------HP 300
Query: 282 WSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQVR 329
W+K PEAI +LL Y RLT EA AH +F ++R
Sbjct: 301 WTKVFRPRT----PPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 344
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 134 bits (338), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 121/228 (53%), Gaps = 21/228 (9%)
Query: 111 SLIFEYVNSTDFKVL------YPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVM 164
+L+ +YV T ++V TL ++ Y+Y+L ++L Y HS GI HRD+KP N++
Sbjct: 174 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 233
Query: 165 IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFA 224
+D + L+L D+G A+ G+ + SRY++ PEL+ DY S+D+WS GC+ A
Sbjct: 234 LDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLA 293
Query: 225 GMIFRKEPFFYGHDNHDQLVKIAKVLGTD--ELNAYLNKYHLELD-PQLDALVGRHSRKP 281
++ +P F G DQLV+I KVLGT E +N + E PQ+ A P
Sbjct: 294 ELLL-GQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKA-------HP 345
Query: 282 WSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQVR 329
W+K PEAI +LL Y RLT EA AH +F ++R
Sbjct: 346 WTKVFRPRT----PPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 389
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 134 bits (338), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 122/228 (53%), Gaps = 21/228 (9%)
Query: 111 SLIFEYVNSTDFKVL------YPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVM 164
+L+ +YV T ++V TL ++ Y+Y+L ++L Y HS GI HRD+KP N++
Sbjct: 131 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 190
Query: 165 IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFA 224
+D + L+L D+G A+ G+ + SRY++ PEL+ DY S+D+WS GC+ A
Sbjct: 191 LDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLA 250
Query: 225 GMIFRKEPFFYGHDNHDQLVKIAKVLGTD--ELNAYLNKYHLELD-PQLDALVGRHSRKP 281
++ +P F G DQLV+I KVLGT E +N + E PQ+ A P
Sbjct: 251 ELLL-GQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKA-------HP 302
Query: 282 WSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQVR 329
W+K + PEAI +LL Y RLT EA AH +F ++R
Sbjct: 303 WTKVF----RPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 346
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 134 bits (338), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 121/228 (53%), Gaps = 21/228 (9%)
Query: 111 SLIFEYVNSTDFKVL------YPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVM 164
+L+ +YV T ++V TL ++ Y+Y+L ++L Y HS GI HRD+KP N++
Sbjct: 100 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 159
Query: 165 IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFA 224
+D + L+L D+G A+ G+ + SRY++ PEL+ DY S+D+WS GC+ A
Sbjct: 160 LDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLA 219
Query: 225 GMIFRKEPFFYGHDNHDQLVKIAKVLGTD--ELNAYLNKYHLELD-PQLDALVGRHSRKP 281
++ +P F G DQLV+I KVLGT E +N + E PQ+ A P
Sbjct: 220 ELLL-GQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKA-------HP 271
Query: 282 WSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQVR 329
W+K PEAI +LL Y RLT EA AH +F ++R
Sbjct: 272 WTKVFRPRT----PPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 315
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 134 bits (337), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 90/302 (29%), Positives = 156/302 (51%), Gaps = 25/302 (8%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTNE-----RCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
++++ V K+G G Y V++ N T E + L+ L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NH 60
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLY--PTLTDYD---IRYYIYELLKALDY 147
PN+VKLLD++ ++ L+FE+V+ D K LT I+ Y+++LL+ L +
Sbjct: 61 PNIVKLLDVIHTENKL--YLVFEHVHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 148 CHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVD 206
CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L+
Sbjct: 118 CHSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 176
Query: 207 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLEL 266
+ Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT + + +
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM-- 233
Query: 267 DPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFA 326
P + +R+ +SK + ++ + L ++L YD R++A+ A+AHP+F
Sbjct: 234 -PDYKPSFPKWARQDFSKVVPPLDE-----DGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
Query: 327 QV 328
V
Sbjct: 288 DV 289
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 134 bits (337), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 121/228 (53%), Gaps = 21/228 (9%)
Query: 111 SLIFEYVNSTDFKVL------YPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVM 164
+L+ +YV T ++V TL ++ Y+Y+L ++L Y HS GI HRD+KP N++
Sbjct: 108 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 167
Query: 165 IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFA 224
+D + L+L D+G A+ G+ + SRY++ PEL+ DY S+D+WS GC+ A
Sbjct: 168 LDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLA 227
Query: 225 GMIFRKEPFFYGHDNHDQLVKIAKVLGTD--ELNAYLNKYHLELD-PQLDALVGRHSRKP 281
++ +P F G DQLV+I KVLGT E +N + E PQ+ A P
Sbjct: 228 ELLL-GQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKA-------HP 279
Query: 282 WSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQVR 329
W+K PEAI +LL Y RLT EA AH +F ++R
Sbjct: 280 WTKVFRPRT----PPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 323
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 134 bits (337), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 121/228 (53%), Gaps = 21/228 (9%)
Query: 111 SLIFEYVNSTDFKVL------YPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVM 164
+L+ +YV T ++V TL ++ Y+Y+L ++L Y HS GI HRD+KP N++
Sbjct: 95 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 154
Query: 165 IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFA 224
+D + L+L D+G A+ G+ + SRY++ PEL+ DY S+D+WS GC+ A
Sbjct: 155 LDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLA 214
Query: 225 GMIFRKEPFFYGHDNHDQLVKIAKVLGTD--ELNAYLNKYHLELD-PQLDALVGRHSRKP 281
++ +P F G DQLV+I KVLGT E +N + E PQ+ A P
Sbjct: 215 ELLL-GQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKA-------HP 266
Query: 282 WSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQVR 329
W+K PEAI +LL Y RLT EA AH +F ++R
Sbjct: 267 WTKVFRPRT----PPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 310
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 134 bits (336), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 121/231 (52%), Gaps = 27/231 (11%)
Query: 111 SLIFEYVNSTDFKVL------YPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVM 164
+L+ +YV T ++V TL ++ Y+Y+L ++L Y HS GI HRD+KP N++
Sbjct: 95 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 154
Query: 165 IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFA 224
+D + L+L D+G A+ G+ + SRY++ PEL+ DY S+D+WS GC+ A
Sbjct: 155 LDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLA 214
Query: 225 GMIFRKEPFFYGHDNHDQLVKIAKVLGTD------ELNAYLNKYHLELDPQLDALVGRHS 278
++ +P F G DQLV+I KVLGT E+N ++ PQ+ A
Sbjct: 215 ELLL-GQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFAF---PQIKA------ 264
Query: 279 RKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQVR 329
PW+K PEAI +LL Y RLT EA AH +F ++R
Sbjct: 265 -HPWTKVFRPRT----PPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 310
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 134 bits (336), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 121/228 (53%), Gaps = 21/228 (9%)
Query: 111 SLIFEYVNSTDFKVL------YPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVM 164
+L+ +YV T ++V TL ++ Y+Y+L ++L Y HS GI HRD+KP N++
Sbjct: 95 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 154
Query: 165 IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFA 224
+D + L+L D+G A+ G+ + SRY++ PEL+ DY S+D+WS GC+ A
Sbjct: 155 LDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLA 214
Query: 225 GMIFRKEPFFYGHDNHDQLVKIAKVLGTD--ELNAYLNKYHLELD-PQLDALVGRHSRKP 281
++ +P F G DQLV+I KVLGT E +N + E PQ+ A P
Sbjct: 215 ELLL-GQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKA-------HP 266
Query: 282 WSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQVR 329
W+K PEAI +LL Y RLT EA AH +F ++R
Sbjct: 267 WTKVFRPRT----PPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 310
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 156/301 (51%), Gaps = 23/301 (7%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTNE-----RCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
++++ V K+G G Y V++ N T E + L+ L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NH 61
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL-YPTLTDYD---IRYYIYELLKALDYC 148
PN+VKLLD++ ++ L+FE+++ K + LT I+ Y+++LL+ L +C
Sbjct: 62 PNIVKLLDVIHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFC 119
Query: 149 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDL 207
HS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L+
Sbjct: 120 HSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 178
Query: 208 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELD 267
+ Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT + + +
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM--- 234
Query: 268 PQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQ 327
P + +R+ +SK + ++ + L ++L YD R++A+ A+AHP+F
Sbjct: 235 PDYKPSFPKWARQDFSKVVPPLDE-----DGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
Query: 328 V 328
V
Sbjct: 290 V 290
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 156/301 (51%), Gaps = 23/301 (7%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTNE-----RCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
++++ V K+G G Y V++ N T E + L+ L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NH 61
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL-YPTLTDYD---IRYYIYELLKALDYC 148
PN+VKLLD++ ++ L+FE+++ K + LT I+ Y+++LL+ L +C
Sbjct: 62 PNIVKLLDVIHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 149 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDL 207
HS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L+
Sbjct: 120 HSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 178
Query: 208 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELD 267
+ Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT + + +
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM--- 234
Query: 268 PQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQ 327
P + +R+ +SK + ++ + L ++L YD R++A+ A+AHP+F
Sbjct: 235 PDYKPSFPKWARQDFSKVVPPLDE-----DGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
Query: 328 V 328
V
Sbjct: 290 V 290
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 156/301 (51%), Gaps = 23/301 (7%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTNE-----RCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
++++ V K+G G Y V++ N T E + L+ L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NH 60
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL-YPTLTDYD---IRYYIYELLKALDYC 148
PN+VKLLD++ ++ L+FE+++ K + LT I+ Y+++LL+ L +C
Sbjct: 61 PNIVKLLDVIHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 149 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDL 207
HS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L+
Sbjct: 119 HSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 177
Query: 208 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELD 267
+ Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT + + +
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM--- 233
Query: 268 PQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQ 327
P + +R+ +SK + ++ + L ++L YD R++A+ A+AHP+F
Sbjct: 234 PDYKPSFPKWARQDFSKVVPPLDE-----DGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
Query: 328 V 328
V
Sbjct: 289 V 289
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 156/306 (50%), Gaps = 25/306 (8%)
Query: 34 FSDQDDYEVVRKVGRGKYSEVFEGINVNTNE-----RCXXXXXXXXXXXXXXXXXXXLQN 88
++++ V K+G G Y V++ N T E + L+
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 89 LCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLY--PTLTDYD---IRYYIYELLK 143
L PN+VKLLD++ ++ L+FE++ S D K LT I+ Y+++LL+
Sbjct: 62 L-NHPNIVKLLDVIHTENKL--YLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 144 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPE 202
L +CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE
Sbjct: 118 GLAFCHSHRVLHRDLKPENLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 176
Query: 203 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKY 262
+L+ + Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT + +
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 235
Query: 263 HLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAH 322
+ P + +R+ +SK + ++ + L ++L YD R++A+ A+AH
Sbjct: 236 SM---PDYKPSFPKWARQDFSKVVPPLDE-----DGRSLLSQMLHYDPNKRISAKAALAH 287
Query: 323 PYFAQV 328
P+F V
Sbjct: 288 PFFQDV 293
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 156/305 (51%), Gaps = 25/305 (8%)
Query: 35 SDQDDYEVVRKVGRGKYSEVFEGINVNTNE-----RCXXXXXXXXXXXXXXXXXXXLQNL 89
++++ V K+G G Y V++ N T E + L+ L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 90 CGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLY--PTLTDYD---IRYYIYELLKA 144
PN+VKLLD++ ++ L+FE++ S D K LT I+ Y+++LL+
Sbjct: 61 -NHPNIVKLLDVIHTENKL--YLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQG 116
Query: 145 LDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPEL 203
L +CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+
Sbjct: 117 LAFCHSHRVLHRDLKPENLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 175
Query: 204 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYH 263
L+ + Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT + +
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 234
Query: 264 LELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHP 323
+ P + +R+ +SK + ++ + L ++L YD R++A+ A+AHP
Sbjct: 235 M---PDYKPSFPKWARQDFSKVVPPLDE-----DGRSLLSQMLHYDPNKRISAKAALAHP 286
Query: 324 YFAQV 328
+F V
Sbjct: 287 FFQDV 291
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 154/300 (51%), Gaps = 21/300 (7%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTNE----RCXXXXXXXXXXXXXXXXXXXLQNLCGGP 93
++++ V K+G G Y V++ N T E + L P
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 94 NVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL-YPTLTDYD---IRYYIYELLKALDYCH 149
N+VKLLD++ ++ L+FE+++ K + LT I+ Y+++LL+ L +CH
Sbjct: 63 NIVKLLDVIHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 208
S ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L+ +
Sbjct: 121 SHRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 209 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDP 268
Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT + + + P
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM---P 235
Query: 269 QLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQV 328
+ +R+ +SK + ++ + L ++L YD R++A+ A+AHP+F V
Sbjct: 236 DYKPSFPKWARQDFSKVVPPLDE-----DGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 290
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 156/304 (51%), Gaps = 23/304 (7%)
Query: 35 SDQDDYEVVRKVGRGKYSEVFEGINVNTNE-----RCXXXXXXXXXXXXXXXXXXXLQNL 89
++++ V K+G G Y V++ N T E + L+ L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 90 CGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL-YPTLTDYD---IRYYIYELLKAL 145
PN+VKLLD++ ++ L+FE+V+ K + LT I+ Y+++LL+ L
Sbjct: 63 -NHPNIVKLLDVIHTENKL--YLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 146 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELL 204
+CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 178
Query: 205 VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHL 264
+ + Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT + + +
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 237
Query: 265 ELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPY 324
P + +R+ +SK + ++ + L ++L YD R++A+ A+AHP+
Sbjct: 238 ---PDYKPSFPKWARQDFSKVVPPLDE-----DGRSLLSQMLHYDPNKRISAKAALAHPF 289
Query: 325 FAQV 328
F V
Sbjct: 290 FQDV 293
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 154/303 (50%), Gaps = 21/303 (6%)
Query: 35 SDQDDYEVVRKVGRGKYSEVFEGINVNTNE----RCXXXXXXXXXXXXXXXXXXXLQNLC 90
++++ V K+G G Y V++ N T E + L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 91 GGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL-YPTLTDYD---IRYYIYELLKALD 146
PN+VKLLD++ ++ L+FE+++ K + LT I+ Y+++LL+ L
Sbjct: 61 NHPNIVKLLDVIHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 147 YCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLV 205
+CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L+
Sbjct: 119 FCHSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 177
Query: 206 DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLE 265
+ Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT + + +
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM- 235
Query: 266 LDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 325
P + +R+ +SK + ++ + L ++L YD R++A+ A+AHP+F
Sbjct: 236 --PDYKPSFPKWARQDFSKVVPPLDE-----DGRSLLSQMLHYDPNKRISAKAALAHPFF 288
Query: 326 AQV 328
V
Sbjct: 289 QDV 291
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 156/305 (51%), Gaps = 25/305 (8%)
Query: 35 SDQDDYEVVRKVGRGKYSEVFEGINVNTNE-----RCXXXXXXXXXXXXXXXXXXXLQNL 89
++++ V K+G G Y V++ N T E + L+ L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 90 CGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLY--PTLTDYD---IRYYIYELLKA 144
PN+VKLLD++ ++ L+FE+++ D K LT I+ Y+++LL+
Sbjct: 63 -NHPNIVKLLDVIHTENKL--YLVFEFLHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 145 LDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPEL 203
L +CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+
Sbjct: 119 LAFCHSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 177
Query: 204 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYH 263
L+ + Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT + +
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 236
Query: 264 LELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHP 323
+ P + +R+ +SK + ++ + L ++L YD R++A+ A+AHP
Sbjct: 237 M---PDYKPSFPKWARQDFSKVVPPLDE-----DGRSLLSQMLHYDPNKRISAKAALAHP 288
Query: 324 YFAQV 328
+F V
Sbjct: 289 FFQDV 293
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 154/300 (51%), Gaps = 21/300 (7%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTNE----RCXXXXXXXXXXXXXXXXXXXLQNLCGGP 93
++++ V K+G G Y V++ N T E + L P
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 94 NVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL-YPTLTDYD---IRYYIYELLKALDYCH 149
N+VKLLD++ ++ L+FE+++ K + LT I+ Y+++LL+ L +CH
Sbjct: 63 NIVKLLDVIHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 208
S ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L+ +
Sbjct: 121 SHRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXK 179
Query: 209 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDP 268
Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT + + + P
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM---P 235
Query: 269 QLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQV 328
+ +R+ +SK + ++ + L ++L YD R++A+ A+AHP+F V
Sbjct: 236 DYKPSFPKWARQDFSKVVPPLDE-----DGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 290
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 156/306 (50%), Gaps = 25/306 (8%)
Query: 34 FSDQDDYEVVRKVGRGKYSEVFEGINVNTNE-----RCXXXXXXXXXXXXXXXXXXXLQN 88
++++ V K+G G Y V++ N T E + L+
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 89 LCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLY--PTLTDYD---IRYYIYELLK 143
L PN+VKLLD++ ++ L+FE++ S D K LT I+ Y+++LL+
Sbjct: 62 L-NHPNIVKLLDVIHTENKL--YLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 144 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPE 202
L +CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 176
Query: 203 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKY 262
+L+ + Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT + +
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 235
Query: 263 HLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAH 322
+ P + +R+ +SK + ++ + L ++L YD R++A+ A+AH
Sbjct: 236 SM---PDYKPSFPKWARQDFSKVVPPLDE-----DGRSLLSQMLHYDPNKRISAKAALAH 287
Query: 323 PYFAQV 328
P+F V
Sbjct: 288 PFFQDV 293
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 154/300 (51%), Gaps = 21/300 (7%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTNE----RCXXXXXXXXXXXXXXXXXXXLQNLCGGP 93
++++ V K+G G Y V++ N T E + L P
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 94 NVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL-YPTLTDYD---IRYYIYELLKALDYCH 149
N+VKLLD++ ++ L+FE+++ K + LT I+ Y+++LL+ L +CH
Sbjct: 62 NIVKLLDVIHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 208
S ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L+ +
Sbjct: 120 SHRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 209 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDP 268
Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT + + + P
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM---P 234
Query: 269 QLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQV 328
+ +R+ +SK + ++ + L ++L YD R++A+ A+AHP+F V
Sbjct: 235 DYKPSFPKWARQDFSKVVPPLDE-----DGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 289
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 156/306 (50%), Gaps = 25/306 (8%)
Query: 34 FSDQDDYEVVRKVGRGKYSEVFEGINVNTNE-----RCXXXXXXXXXXXXXXXXXXXLQN 88
++++ V K+G G Y V++ N T E + L+
Sbjct: 1 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 60
Query: 89 LCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLY--PTLTDYD---IRYYIYELLK 143
L PN+VKLLD++ ++ L+FE++ S D K LT I+ Y+++LL+
Sbjct: 61 L-NHPNIVKLLDVIHTENKL--YLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQ 116
Query: 144 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPE 202
L +CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE
Sbjct: 117 GLAFCHSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 175
Query: 203 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKY 262
+L+ + Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT + +
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 234
Query: 263 HLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAH 322
+ P + +R+ +SK + ++ + L ++L YD R++A+ A+AH
Sbjct: 235 SM---PDYKPSFPKWARQDFSKVVPPLDE-----DGRSLLSQMLHYDPNKRISAKAALAH 286
Query: 323 PYFAQV 328
P+F V
Sbjct: 287 PFFQDV 292
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 154/300 (51%), Gaps = 21/300 (7%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTNE----RCXXXXXXXXXXXXXXXXXXXLQNLCGGP 93
++++ V K+G G Y V++ N T E + L P
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 94 NVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL-YPTLTDYD---IRYYIYELLKALDYCH 149
N+VKLLD++ ++ L+FE+++ K + LT I+ Y+++LL+ L +CH
Sbjct: 70 NIVKLLDVIHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 127
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 208
S ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L+ +
Sbjct: 128 SHRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXK 186
Query: 209 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDP 268
Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT + + + P
Sbjct: 187 YYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM---P 242
Query: 269 QLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQV 328
+ +R+ +SK + ++ + L ++L YD R++A+ A+AHP+F V
Sbjct: 243 DYKPSFPKWARQDFSKVVPPLDE-----DGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 297
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 156/301 (51%), Gaps = 23/301 (7%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTNE-----RCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
++++ V K+G G Y V++ N T E + L+ L
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NH 68
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL-YPTLTDYD---IRYYIYELLKALDYC 148
PN+VKLLD++ ++ L+FE+++ K + LT I+ Y+++LL+ L +C
Sbjct: 69 PNIVKLLDVIHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 149 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDL 207
HS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L+
Sbjct: 127 HSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 185
Query: 208 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELD 267
+ Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT + + +
Sbjct: 186 KYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM--- 241
Query: 268 PQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQ 327
P + +R+ +SK + ++ + L ++L YD R++A+ A+AHP+F
Sbjct: 242 PDYKPSFPKWARQDFSKVVPPLDE-----DGRSLLSQMLHYDPNKRISAKAALAHPFFQD 296
Query: 328 V 328
V
Sbjct: 297 V 297
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 156/301 (51%), Gaps = 23/301 (7%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTNE-----RCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
++++ V K+G G Y V++ N T E + L+ L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKEL-NH 61
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL-YPTLTDYD---IRYYIYELLKALDYC 148
PN+VKLLD++ ++ L+FE+++ K + LT I+ Y+++LL+ L +C
Sbjct: 62 PNIVKLLDVIHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 149 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDL 207
HS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L+
Sbjct: 120 HSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 178
Query: 208 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELD 267
+ Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT + + +
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM--- 234
Query: 268 PQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQ 327
P + +R+ +SK + ++ + L ++L YD R++A+ A+AHP+F
Sbjct: 235 PDYKPSFPKWARQDFSKVVPPLDE-----DGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
Query: 328 V 328
V
Sbjct: 290 V 290
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 156/301 (51%), Gaps = 23/301 (7%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTNE-----RCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
++++ V K+G G Y V++ N T E + L+ L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKEL-NH 60
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL-YPTLTDYD---IRYYIYELLKALDYC 148
PN+VKLLD++ ++ L+FE+++ K + LT I+ Y+++LL+ L +C
Sbjct: 61 PNIVKLLDVIHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 149 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDL 207
HS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L+
Sbjct: 119 HSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 177
Query: 208 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELD 267
+ Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT + + +
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM--- 233
Query: 268 PQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQ 327
P + +R+ +SK + ++ + L ++L YD R++A+ A+AHP+F
Sbjct: 234 PDYKPSFPKWARQDFSKVVPPLDE-----DGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
Query: 328 V 328
V
Sbjct: 289 V 289
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 156/301 (51%), Gaps = 23/301 (7%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTNE-----RCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
++++ V K+G G Y V++ N T E + L+ L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NH 61
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL-YPTLTDYD---IRYYIYELLKALDYC 148
PN+VKLLD++ ++ L+FE+++ K + LT I+ Y+++LL+ L +C
Sbjct: 62 PNIVKLLDVIHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 149 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDL 207
HS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L+
Sbjct: 120 HSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 178
Query: 208 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELD 267
+ Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT + + +
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM--- 234
Query: 268 PQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQ 327
P + +R+ +SK + ++ + L ++L YD R++A+ A+AHP+F
Sbjct: 235 PDYKPSFPKWARQDFSKVVPPLDE-----DGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
Query: 328 V 328
V
Sbjct: 290 V 290
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 154/304 (50%), Gaps = 21/304 (6%)
Query: 34 FSDQDDYEVVRKVGRGKYSEVFEGINVNTNE----RCXXXXXXXXXXXXXXXXXXXLQNL 89
++++ V K+G G Y V++ N T E + L
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 90 CGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL-YPTLTDYD---IRYYIYELLKAL 145
PN+VKLLD++ ++ L+FE+++ K + LT I+ Y+++LL+ L
Sbjct: 62 LNHPNIVKLLDVIHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 146 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELL 204
+CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 178
Query: 205 VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHL 264
+ + Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT + + +
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 237
Query: 265 ELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPY 324
P + +R+ +SK + ++ + L ++L YD R++A+ A+AHP+
Sbjct: 238 ---PDYKPSFPKWARQDFSKVVPPLDE-----DGRSLLSQMLHYDPNKRISAKAALAHPF 289
Query: 325 FAQV 328
F V
Sbjct: 290 FQDV 293
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 154/303 (50%), Gaps = 21/303 (6%)
Query: 35 SDQDDYEVVRKVGRGKYSEVFEGINVNTNE----RCXXXXXXXXXXXXXXXXXXXLQNLC 90
++++ V K+G G Y V++ N T E + L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 91 GGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL-YPTLTDYD---IRYYIYELLKALD 146
PN+VKLLD++ ++ L+FE+++ K + LT I+ Y+++LL+ L
Sbjct: 61 NHPNIVKLLDVIHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 147 YCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLV 205
+CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L+
Sbjct: 119 FCHSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 177
Query: 206 DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLE 265
+ Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT + + +
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM- 235
Query: 266 LDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 325
P + +R+ +SK + ++ + L ++L YD R++A+ A+AHP+F
Sbjct: 236 --PDYKPSFPKWARQDFSKVVPPLDE-----DGRSLLSQMLHYDPNKRISAKAALAHPFF 288
Query: 326 AQV 328
V
Sbjct: 289 QDV 291
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 156/301 (51%), Gaps = 23/301 (7%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTNE-----RCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
++++ V K+G G Y V++ N T E + L+ L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NH 60
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL-YPTLTDYD---IRYYIYELLKALDYC 148
PN+VKLLD++ ++ L+FE+++ K + LT I+ Y+++LL+ L +C
Sbjct: 61 PNIVKLLDVIHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 149 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDL 207
HS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L+
Sbjct: 119 HSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 177
Query: 208 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELD 267
+ Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT + + +
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM--- 233
Query: 268 PQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQ 327
P + +R+ +SK + ++ + L ++L YD R++A+ A+AHP+F
Sbjct: 234 PDYKPSFPKWARQDFSKVVPPLDE-----DGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
Query: 328 V 328
V
Sbjct: 289 V 289
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 154/300 (51%), Gaps = 21/300 (7%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTNE----RCXXXXXXXXXXXXXXXXXXXLQNLCGGP 93
++++ V K+G G Y V++ N T E + L P
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 94 NVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL-YPTLTDYD---IRYYIYELLKALDYCH 149
N+VKLLD++ ++ L+FE+++ K + LT I+ Y+++LL+ L +CH
Sbjct: 63 NIVKLLDVIHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 208
S ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L+ +
Sbjct: 121 SHRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 209 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDP 268
Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT + + + P
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM---P 235
Query: 269 QLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQV 328
+ +R+ +SK + ++ + L ++L YD R++A+ A+AHP+F V
Sbjct: 236 DYKPSFPKWARQDFSKVVPPLDE-----DGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 290
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 154/303 (50%), Gaps = 21/303 (6%)
Query: 35 SDQDDYEVVRKVGRGKYSEVFEGINVNTNE----RCXXXXXXXXXXXXXXXXXXXLQNLC 90
++++ V K+G G Y V++ N T E + L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 91 GGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL-YPTLTDYD---IRYYIYELLKALD 146
PN+VKLLD++ ++ L+FE+++ K + LT I+ Y+++LL+ L
Sbjct: 62 NHPNIVKLLDVIHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 147 YCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLV 205
+CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L+
Sbjct: 120 FCHSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 178
Query: 206 DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLE 265
+ Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT + + +
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM- 236
Query: 266 LDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 325
P + +R+ +SK + ++ + L ++L YD R++A+ A+AHP+F
Sbjct: 237 --PDYKPSFPKWARQDFSKVVPPLDE-----DGRSLLSQMLHYDPNKRISAKAALAHPFF 289
Query: 326 AQV 328
V
Sbjct: 290 QDV 292
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 154/304 (50%), Gaps = 21/304 (6%)
Query: 34 FSDQDDYEVVRKVGRGKYSEVFEGINVNTNE----RCXXXXXXXXXXXXXXXXXXXLQNL 89
++++ V K+G G Y V++ N T E + L
Sbjct: 3 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 62
Query: 90 CGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL-YPTLTDYD---IRYYIYELLKAL 145
PN+VKLLD++ ++ L+FE+++ K + LT I+ Y+++LL+ L
Sbjct: 63 LNHPNIVKLLDVIHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 120
Query: 146 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELL 204
+CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L
Sbjct: 121 AFCHSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 179
Query: 205 VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHL 264
+ + Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT + + +
Sbjct: 180 LGCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 238
Query: 265 ELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPY 324
P + +R+ +SK + ++ + L ++L YD R++A+ A+AHP+
Sbjct: 239 ---PDYKPSFPKWARQDFSKVVPPLDE-----DGRSLLSQMLHYDPNKRISAKAALAHPF 290
Query: 325 FAQV 328
F V
Sbjct: 291 FQDV 294
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 156/304 (51%), Gaps = 23/304 (7%)
Query: 35 SDQDDYEVVRKVGRGKYSEVFEGINVNTNE-----RCXXXXXXXXXXXXXXXXXXXLQNL 89
++++ V K+G G Y V++ N T E + L+ L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 90 CGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL-YPTLTDYD---IRYYIYELLKAL 145
PN+VKLLD++ ++ L+FE+++ K + LT I+ Y+++LL+ L
Sbjct: 63 -NHPNIVKLLDVIHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 146 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELL 204
+CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 178
Query: 205 VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHL 264
+ + Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT + + +
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 237
Query: 265 ELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPY 324
P + +R+ +SK + ++ + L ++L YD R++A+ A+AHP+
Sbjct: 238 ---PDYKPSFPKWARQDFSKVVPPLDE-----DGRSLLSQMLHYDPNKRISAKAALAHPF 289
Query: 325 FAQV 328
F V
Sbjct: 290 FQDV 293
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 156/301 (51%), Gaps = 23/301 (7%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTNE-----RCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
++++ V K+G G Y V++ N T E + L+ L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NH 61
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL-YPTLTDYD---IRYYIYELLKALDYC 148
PN+VKLLD++ ++ L+FE+++ K + LT I+ Y+++LL+ L +C
Sbjct: 62 PNIVKLLDVIHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 149 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDL 207
HS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L+
Sbjct: 120 HSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 178
Query: 208 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELD 267
+ Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT + + +
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM--- 234
Query: 268 PQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQ 327
P + +R+ +SK + ++ + L ++L YD R++A+ A+AHP+F
Sbjct: 235 PDYKPSFPKWARQDFSKVVPPLDE-----DGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
Query: 328 V 328
V
Sbjct: 290 V 290
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 156/304 (51%), Gaps = 23/304 (7%)
Query: 35 SDQDDYEVVRKVGRGKYSEVFEGINVNTNE-----RCXXXXXXXXXXXXXXXXXXXLQNL 89
++++ V K+G G Y V++ N T E + L+ L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 90 CGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL-YPTLTDYD---IRYYIYELLKAL 145
PN+VKLLD++ ++ L+FE+++ K + LT I+ Y+++LL+ L
Sbjct: 62 -NHPNIVKLLDVIHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 146 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELL 204
+CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L
Sbjct: 119 AFCHSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 177
Query: 205 VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHL 264
+ + Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT + + +
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 236
Query: 265 ELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPY 324
P + +R+ +SK + ++ + L ++L YD R++A+ A+AHP+
Sbjct: 237 ---PDYKPSFPKWARQDFSKVVPPLDE-----DGRSLLSQMLHYDPNKRISAKAALAHPF 288
Query: 325 FAQV 328
F V
Sbjct: 289 FQDV 292
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 156/301 (51%), Gaps = 23/301 (7%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTNE-----RCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
++++ V K+G G Y V++ N T E + L+ L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NH 60
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL-YPTLTDYD---IRYYIYELLKALDYC 148
PN+VKLLD++ ++ L+FE+++ K + LT I+ Y+++LL+ L +C
Sbjct: 61 PNIVKLLDVIHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 149 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDL 207
HS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L+
Sbjct: 119 HSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 177
Query: 208 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELD 267
+ Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT + + +
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM--- 233
Query: 268 PQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQ 327
P + +R+ +SK + ++ + L ++L YD R++A+ A+AHP+F
Sbjct: 234 PDYKPSFPKWARQDFSKVVPPLDE-----DGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
Query: 328 V 328
V
Sbjct: 289 V 289
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 132 bits (331), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 154/300 (51%), Gaps = 21/300 (7%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTNE----RCXXXXXXXXXXXXXXXXXXXLQNLCGGP 93
++++ V K+G G Y V++ N T E + L P
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 94 NVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL-YPTLTDYD---IRYYIYELLKALDYCH 149
N+VKLLD++ ++ L+FE+++ K + LT I+ Y+++LL+ L +CH
Sbjct: 64 NIVKLLDVIHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 208
S ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L+ +
Sbjct: 122 SHRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 209 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDP 268
Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT + + + P
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM---P 236
Query: 269 QLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQV 328
+ +R+ +SK + ++ + L ++L YD R++A+ A+AHP+F V
Sbjct: 237 DYKPSFPKWARQDFSKVVPPLDE-----DGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 291
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 154/303 (50%), Gaps = 21/303 (6%)
Query: 35 SDQDDYEVVRKVGRGKYSEVFEGINVNTNE----RCXXXXXXXXXXXXXXXXXXXLQNLC 90
++++ V K+G G Y V++ N T E + L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 91 GGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL-YPTLTDYD---IRYYIYELLKALD 146
PN+VKLLD++ ++ L+FE+++ K + LT I+ Y+++LL+ L
Sbjct: 62 NHPNIVKLLDVIHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 147 YCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLV 205
+CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L+
Sbjct: 120 FCHSHRVLHRDLKPENLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 178
Query: 206 DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLE 265
+ Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT + + +
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM- 236
Query: 266 LDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 325
P + +R+ +SK + ++ + L ++L YD R++A+ A+AHP+F
Sbjct: 237 --PDYKPSFPKWARQDFSKVVPPLDE-----DGRSLLSQMLHYDPNKRISAKAALAHPFF 289
Query: 326 AQV 328
V
Sbjct: 290 QDV 292
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 154/303 (50%), Gaps = 21/303 (6%)
Query: 35 SDQDDYEVVRKVGRGKYSEVFEGINVNTNE----RCXXXXXXXXXXXXXXXXXXXLQNLC 90
++++ V K+G G Y V++ N T E + L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 91 GGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL-YPTLTDYD---IRYYIYELLKALD 146
PN+VKLLD++ ++ L+FE+++ K + LT I+ Y+++LL+ L
Sbjct: 61 NHPNIVKLLDVIHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 147 YCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLV 205
+CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L+
Sbjct: 119 FCHSHRVLHRDLKPENLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 177
Query: 206 DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLE 265
+ Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT + + +
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM- 235
Query: 266 LDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 325
P + +R+ +SK + ++ + L ++L YD R++A+ A+AHP+F
Sbjct: 236 --PDYKPSFPKWARQDFSKVVPPLDE-----DGRSLLSQMLHYDPNKRISAKAALAHPFF 288
Query: 326 AQV 328
V
Sbjct: 289 QDV 291
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 131 bits (330), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 133/239 (55%), Gaps = 18/239 (7%)
Query: 94 NVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPT----LTDYDIRYYIYELLKALDYCH 149
N+VKL D++ + K L+FE+++ D K L L + ++ +LL + YCH
Sbjct: 61 NIVKLYDVIHTK--KRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH 117
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 208
+ ++HRD+KP N++I+ E +L++ D+GLA F P ++Y V + +++ P++L+ +
Sbjct: 118 DRRVLHRDLKPQNLLINRE-GELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSK 176
Query: 209 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDP 268
Y ++D+WS+GC+FA M+ P F G DQL++I ++LGT + N L P
Sbjct: 177 KYSTTIDIWSVGCIFAEMV-NGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTEL---P 232
Query: 269 QLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQ 327
+ D + PW F+ ++ ID L K+L+ D R+TA++A+ H YF +
Sbjct: 233 KYDPNFTVYEPLPWESFLKGLDE-----SGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 131 bits (330), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 133/238 (55%), Gaps = 16/238 (6%)
Query: 94 NVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL---YPTLTDYDIRYYIYELLKALDYCHS 150
N+VKL D++ + K L+FE+++ K+L L + ++ +LL + YCH
Sbjct: 61 NIVKLYDVIHTK--KRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD 118
Query: 151 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQD 209
+ ++HRD+KP N++I+ E +L++ D+GLA F P ++Y V + +++ P++L+ +
Sbjct: 119 RRVLHRDLKPQNLLINRE-GELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKK 177
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
Y ++D+WS+GC+FA M+ P F G DQL++I ++LGT + N L P+
Sbjct: 178 YSTTIDIWSVGCIFAEMV-NGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTEL---PK 233
Query: 270 LDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQ 327
D + PW F+ ++ ID L K+L+ D R+TA++A+ H YF +
Sbjct: 234 YDPNFTVYEPLPWESFLKGLDE-----SGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 131 bits (329), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 155/298 (52%), Gaps = 23/298 (7%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTNE-----RCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
++++ V K+G G Y V++ N T E + L+ L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NH 61
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL-YPTLTDYD---IRYYIYELLKALDYC 148
PN+VKLLD++ ++ L+FE+++ K + LT I+ Y+++LL+ L +C
Sbjct: 62 PNIVKLLDVIHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 149 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDL 207
HS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L+
Sbjct: 120 HSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 178
Query: 208 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELD 267
+ Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT + + +
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM--- 234
Query: 268 PQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 325
P + +R+ +SK + ++ + L ++L YD R++A+ A+AHP+F
Sbjct: 235 PDYKPSFPKWARQDFSKVVPPLDE-----DGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 131 bits (329), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 133/239 (55%), Gaps = 18/239 (7%)
Query: 94 NVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPT----LTDYDIRYYIYELLKALDYCH 149
N+VKL D++ + K L+FE+++ D K L L + ++ +LL + YCH
Sbjct: 61 NIVKLYDVIHTK--KRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH 117
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 208
+ ++HRD+KP N++I+ E +L++ D+GLA F P ++Y + + +++ P++L+ +
Sbjct: 118 DRRVLHRDLKPQNLLINRE-GELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSK 176
Query: 209 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDP 268
Y ++D+WS+GC+FA M+ P F G DQL++I ++LGT + N L P
Sbjct: 177 KYSTTIDIWSVGCIFAEMV-NGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTEL---P 232
Query: 269 QLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQ 327
+ D + PW F+ ++ ID L K+L+ D R+TA++A+ H YF +
Sbjct: 233 KYDPNFTVYEPLPWESFLKGLDE-----SGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 130 bits (328), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 156/302 (51%), Gaps = 25/302 (8%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTNE-----RCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
++++ V K+G G Y V++ N T E + L+ L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NH 61
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLY--PTLTDYD---IRYYIYELLKALDY 147
PN+VKLLD++ ++ L+FE+++ D K LT I+ Y+++LL+ L +
Sbjct: 62 PNIVKLLDVIHTENKL--YLVFEFLHQ-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 148 CHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVD 206
CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L+
Sbjct: 119 CHSHRVLHRDLKPENLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 177
Query: 207 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLEL 266
+ Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT + + +
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM-- 234
Query: 267 DPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFA 326
P + +R+ +SK + ++ + L ++L YD R++A+ A+AHP+F
Sbjct: 235 -PDYKPSFPKWARQDFSKVVPPLDE-----DGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
Query: 327 QV 328
V
Sbjct: 289 DV 290
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 148/300 (49%), Gaps = 29/300 (9%)
Query: 40 YEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNLC-----GGPN 94
YE + K+G G Y VF+ N T+E L+ +C N
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHE-IVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 95 VVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYD---IRYYIYELLKALDYCHSQ 151
+V+L D++ K +L+FE+ + K D D ++ ++++LLK L +CHS+
Sbjct: 63 IVRLHDVL--HSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR 120
Query: 152 GIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQDY 210
++HRD+KP N++I+ +L+L D+GLA F P + Y+ V + +++ P++L + Y
Sbjct: 121 NVLHRDLKPQNLLINRN-GELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLY 179
Query: 211 DYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQL 270
S+DMWS GC+FA + P F G+D DQL +I ++LGT + Q
Sbjct: 180 STSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGT------------PTEEQW 227
Query: 271 DALVGRHSRKPWSKFINADNQHLVSPE----AIDFLDKLLRYDHQDRLTAREAMAHPYFA 326
++ KP+ + + V P+ D L LL+ + R++A EA+ HPYF+
Sbjct: 228 PSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS 287
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 127 bits (320), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 135/255 (52%), Gaps = 38/255 (14%)
Query: 94 NVVKLLDIVRDQHSKTPS----------LIFEYVNSTDFKVLYPTLTDYDIRYYIYELLK 143
NV+ LLD+ TP+ L+ ++ + K++ ++ I+Y +Y++LK
Sbjct: 102 NVIGLLDVF------TPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLK 155
Query: 144 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 203
L Y HS G++HRD+KP N+ ++ + +L+++D+GLA H E V +R+++ PE+
Sbjct: 156 GLKYIHSAGVVHRDLKPGNLAVNEDC-ELKILDFGLAR--HADAEMTGYVVTRWYRAPEV 212
Query: 204 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG------TDELNA 257
++ Y+ ++D+WS+GC+ A M+ K F G D DQL +I KV G +LN
Sbjct: 213 ILSWMHYNQTVDIWSVGCIMAEMLTGKT-LFKGKDYLDQLTQILKVTGVPGTEFVQKLND 271
Query: 258 YLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAR 317
K +++ PQ RK +++ SP+A D L+K+L D RLTA
Sbjct: 272 KAAKSYIQSLPQT-------PRKDFTQLFPR-----ASPQAADLLEKMLELDVDKRLTAA 319
Query: 318 EAMAHPYFAQVRAAE 332
+A+ HP+F R E
Sbjct: 320 QALTHPFFEPFRDPE 334
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 127 bits (320), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 135/255 (52%), Gaps = 38/255 (14%)
Query: 94 NVVKLLDIVRDQHSKTPS----------LIFEYVNSTDFKVLYPTLTDYDIRYYIYELLK 143
NV+ LLD+ TP+ L+ ++ + K++ ++ I+Y +Y++LK
Sbjct: 84 NVIGLLDVF------TPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLK 137
Query: 144 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 203
L Y HS G++HRD+KP N+ ++ + +L+++D+GLA H E V +R+++ PE+
Sbjct: 138 GLKYIHSAGVVHRDLKPGNLAVNEDC-ELKILDFGLAR--HADAEMTGYVVTRWYRAPEV 194
Query: 204 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG------TDELNA 257
++ Y+ ++D+WS+GC+ A M+ K F G D DQL +I KV G +LN
Sbjct: 195 ILSWMHYNQTVDIWSVGCIMAEMLTGKT-LFKGKDYLDQLTQILKVTGVPGTEFVQKLND 253
Query: 258 YLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAR 317
K +++ PQ RK +++ SP+A D L+K+L D RLTA
Sbjct: 254 KAAKSYIQSLPQT-------PRKDFTQLFPR-----ASPQAADLLEKMLELDVDKRLTAA 301
Query: 318 EAMAHPYFAQVRAAE 332
+A+ HP+F R E
Sbjct: 302 QALTHPFFEPFRDPE 316
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 127 bits (319), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 150/301 (49%), Gaps = 31/301 (10%)
Query: 40 YEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNLC-----GGPN 94
YE + K+G G Y VF+ N T+E L+ +C N
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHE-IVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 95 VVKLLDIVRDQHS-KTPSLIFEYVNSTDFKVLYPTLTDYD---IRYYIYELLKALDYCHS 150
+V+L D++ HS K +L+FE+ + K D D ++ ++++LLK L +CHS
Sbjct: 63 IVRLHDVL---HSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS 119
Query: 151 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQD 209
+ ++HRD+KP N++I+ +L+L ++GLA F P + Y+ V + +++ P++L +
Sbjct: 120 RNVLHRDLKPQNLLINRN-GELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKL 178
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
Y S+DMWS GC+FA + P F G+D DQL +I ++LGT + Q
Sbjct: 179 YSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGT------------PTEEQ 226
Query: 270 LDALVGRHSRKPWSKFINADNQHLVSPE----AIDFLDKLLRYDHQDRLTAREAMAHPYF 325
++ KP+ + + V P+ D L LL+ + R++A EA+ HPYF
Sbjct: 227 WPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYF 286
Query: 326 A 326
+
Sbjct: 287 S 287
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 118/199 (59%), Gaps = 10/199 (5%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 188
LTD +++ IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++D+GLA H E
Sbjct: 151 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLAR--HTDDE 207
Query: 189 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
VA+R+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ +QL +I +
Sbjct: 208 MTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRT-LFPGTDHINQLQQIMR 266
Query: 249 VLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRY 308
+ GT + E +++L R FI A+ P A+D L+K+L
Sbjct: 267 LTGTPPASVISRMPSHEARNYINSLPQMPKRNFADVFIGAN------PLAVDLLEKMLVL 320
Query: 309 DHQDRLTAREAMAHPYFAQ 327
D R+TA EA+AHPYF+Q
Sbjct: 321 DTDKRITASEALAHPYFSQ 339
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 155/306 (50%), Gaps = 19/306 (6%)
Query: 34 FSDQDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXX---XXXXXXXXXXXXXXLQNLC 90
S ++ + K+G G Y+ V++G+N T L
Sbjct: 1 MSSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKEL 60
Query: 91 GGPNVVKLLDIVRDQHSKTPSLIFEYVNS-----TDFKVLYPTLTDYD---IRYYIYELL 142
N+V+L D++ ++ T L+FE++++ D + + T + ++Y+ ++LL
Sbjct: 61 KHENIVRLYDVIHTENKLT--LVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLL 118
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGP 201
+ L +CH I+HRD+KP N++I+ +L+L D+GLA F P ++ V + +++ P
Sbjct: 119 QGLAFCHENKILHRDLKPQNLLINKR-GQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAP 177
Query: 202 ELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNK 261
++L+ + Y S+D+WS GC+ A MI K P F G ++ +QL I ++GT + + +
Sbjct: 178 DVLMGSRTYSTSIDIWSCGCILAEMITGK-PLFPGTNDEEQLKLIFDIMGTPNESLWPSV 236
Query: 262 YHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMA 321
L P+ + + + + + + + + +DFL LL+ + RL+A++A+
Sbjct: 237 TKL---PKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293
Query: 322 HPYFAQ 327
HP+FA+
Sbjct: 294 HPWFAE 299
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 148/311 (47%), Gaps = 39/311 (12%)
Query: 35 SDQDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNLC---- 90
+DQ YE V ++G G Y +VF+ ++ R ++ +
Sbjct: 9 ADQQ-YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 67
Query: 91 ----GGPNVVKLLDIV---RDQHSKTPSLIFEYVNS--TDF--KVLYPTLTDYDIRYYIY 139
PNVV+L D+ R +L+FE+V+ T + KV P + I+ ++
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF 127
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 199
+LL+ LD+ HS ++HRD+KP N+++ +++L D+GLA Y V + +++
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSS-GQIKLADFGLARIYSFQMALTSVVVTLWYR 186
Query: 200 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYL 259
PE+L+ Y +D+WS+GC+FA M FR++P F G + DQL KI V+G
Sbjct: 187 APEVLLQ-SSYATPVDLWSVGCIFAEM-FRRKPLFRGSSDVDQLGKILDVIGLPG----- 239
Query: 260 NKYHLELDPQLDALVGRH-----SRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRL 314
E D D + R S +P KF+ D L D L K L ++ R+
Sbjct: 240 -----EEDWPRDVALPRQAFHSKSAQPIEKFVT-DIDEL----GKDLLLKCLTFNPAKRI 289
Query: 315 TAREAMAHPYF 325
+A A++HPYF
Sbjct: 290 SAYSALSHPYF 300
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 148/311 (47%), Gaps = 39/311 (12%)
Query: 35 SDQDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNLC---- 90
+DQ YE V ++G G Y +VF+ ++ R ++ +
Sbjct: 9 ADQQ-YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 67
Query: 91 ----GGPNVVKLLDIV---RDQHSKTPSLIFEYVNS--TDF--KVLYPTLTDYDIRYYIY 139
PNVV+L D+ R +L+FE+V+ T + KV P + I+ ++
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF 127
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 199
+LL+ LD+ HS ++HRD+KP N+++ +++L D+GLA Y V + +++
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSS-GQIKLADFGLARIYSFQMALTSVVVTLWYR 186
Query: 200 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYL 259
PE+L+ Y +D+WS+GC+FA M FR++P F G + DQL KI V+G
Sbjct: 187 APEVLLQ-SSYATPVDLWSVGCIFAEM-FRRKPLFRGSSDVDQLGKILDVIGLPG----- 239
Query: 260 NKYHLELDPQLDALVGRH-----SRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRL 314
E D D + R S +P KF+ D L D L K L ++ R+
Sbjct: 240 -----EEDWPRDVALPRQAFHSKSAQPIEKFVT-DIDEL----GKDLLLKCLTFNPAKRI 289
Query: 315 TAREAMAHPYF 325
+A A++HPYF
Sbjct: 290 SAYSALSHPYF 300
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 159/330 (48%), Gaps = 50/330 (15%)
Query: 40 YEVVRKVGRGKYSEVFEGINVNTNE-----RCXXXXXXXXXXXXXXXXXXXLQNLCGGPN 94
YE+V+K+G+G Y V++ I+ T E + L L G N
Sbjct: 11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHEN 70
Query: 95 VVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTD-YDIRYYIYELLKALDYCHSQGI 153
+V LL+++R + + L+F+Y+ + V+ + + +Y +Y+L+K + Y HS G+
Sbjct: 71 IVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGL 130
Query: 154 MHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR--------------------- 192
+HRD+KP N++++ E +++ D+GL+ + N+R
Sbjct: 131 LHRDMKPSNILLNAECH-VKVADFGLSRSF-----VNIRRVTNNIPLSINENTENFDDDQ 184
Query: 193 ------VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKI 246
VA+R+++ PE+L+ Y +DMWSLGC+ G I +P F G +QL +I
Sbjct: 185 PILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCIL-GEILCGKPIFPGSSTMNQLERI 243
Query: 247 AKVL------GTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFIN----ADNQHLVSP 296
V+ + + + K +E + + + R ++K+ N + + +
Sbjct: 244 IGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNE 303
Query: 297 EAIDFLDKLLRYDHQDRLTAREAMAHPYFA 326
EA+D LDKLL+++ R++A +A+ HP+ +
Sbjct: 304 EALDLLDKLLQFNPNKRISANDALKHPFVS 333
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 138/258 (53%), Gaps = 43/258 (16%)
Query: 94 NVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYP-------------TLTDYDIRYYIYE 140
NV+ LLD+ TP + + TDF ++ P L + I++ +Y+
Sbjct: 85 NVIGLLDVF------TPDETLD--DFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQ 136
Query: 141 LLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 200
+LK L Y H+ GI+HRD+KP N+ ++ + +L+++D+GLA E V +R+++
Sbjct: 137 MLKGLRYIHAAGIIHRDLKPGNLAVNEDC-ELKILDFGLAR--QADSEMXGXVVTRWYRA 193
Query: 201 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT------DE 254
PE++++ Y ++D+WS+GC+ A MI K F G D+ DQL +I KV GT
Sbjct: 194 PEVILNWMRYTQTVDIWSVGCIMAEMITGKT-LFKGSDHLDQLKEIMKVTGTPPAEFVQR 252
Query: 255 LNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRL 314
L + K +++ P+L+ +K ++ + SP A++ L+K+L D + R+
Sbjct: 253 LQSDEAKNYMKGLPELE-------KKDFASILTN-----ASPLAVNLLEKMLVLDAEQRV 300
Query: 315 TAREAMAHPYFAQVRAAE 332
TA EA+AHPYF + E
Sbjct: 301 TAGEALAHPYFESLHDTE 318
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 145/306 (47%), Gaps = 38/306 (12%)
Query: 40 YEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNLC--------G 91
YE V ++G G Y +VF+ ++ R ++ +
Sbjct: 13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE 72
Query: 92 GPNVVKLLDIV---RDQHSKTPSLIFEYVNS--TDF--KVLYPTLTDYDIRYYIYELLKA 144
PNVV+L D+ R +L+FE+V+ T + KV P + I+ +++LL+
Sbjct: 73 HPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRG 132
Query: 145 LDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELL 204
LD+ HS ++HRD+KP N+++ +++L D+GLA Y V + +++ PE+L
Sbjct: 133 LDFLHSHRVVHRDLKPQNILVTSS-GQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVL 191
Query: 205 VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHL 264
+ Y +D+WS+GC+FA M FR++P F G + DQL KI V+G
Sbjct: 192 LQ-SSYATPVDLWSVGCIFAEM-FRRKPLFRGSSDVDQLGKILDVIGLPG---------- 239
Query: 265 ELDPQLDALVGRH-----SRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREA 319
E D D + R S +P KF+ D L D L K L ++ R++A A
Sbjct: 240 EEDWPRDVALPRQAFHSKSAQPIEKFVT-DIDEL----GKDLLLKCLTFNPAKRISAYSA 294
Query: 320 MAHPYF 325
++HPYF
Sbjct: 295 LSHPYF 300
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 143/251 (56%), Gaps = 34/251 (13%)
Query: 94 NVVKLLDIVRDQHSKTPSL-------IFEYVNSTDFKVLYPT--LTDYDIRYYIYELLKA 144
N++ + DI+R P++ I + + TD L T L++ I Y++Y++L+
Sbjct: 84 NIIGINDIIR-----APTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 138
Query: 145 LDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKG 200
L Y HS ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++
Sbjct: 139 LKYIHSANVLHRDLKPSNLLLNTTC-DLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 197
Query: 201 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT---DELNA 257
PE++++ + Y S+D+WS+GC+ A M+ + P F G DQL I +LG+ ++LN
Sbjct: 198 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQEDLNC 256
Query: 258 YLNKYHLELDPQLDALVGRHSRKPWSK-FINADNQHLVSPEAIDFLDKLLRYDHQDRLTA 316
+N L+ L +L + ++ PW++ F NAD++ A+D LDK+L ++ R+
Sbjct: 257 IIN---LKARNYLLSLPHK-NKVPWNRLFPNADSK------ALDLLDKMLTFNPHKRIEV 306
Query: 317 REAMAHPYFAQ 327
+A+AHPY AQ
Sbjct: 307 EQALAHPYLAQ 317
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 121/202 (59%), Gaps = 14/202 (6%)
Query: 128 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 187
L+D +++ +Y+LL+ L Y HS GI+HRD+KP NV ++ + +LR++D+GLA +
Sbjct: 119 ALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDC-ELRILDFGLAR--QADE 175
Query: 188 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 247
E VA+R+++ PE++++ Y+ ++D+WS+GC+ A ++ + + F G D DQL +I
Sbjct: 176 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-QGKALFPGSDYIDQLKRIM 234
Query: 248 KVLGT--DELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKL 305
+V+GT E+ A ++ H + +L + S F A+ P AID L ++
Sbjct: 235 EVVGTPSPEVLAKISSEHART--YIQSLPPMPQKDLSSIFRGAN------PLAIDLLGRM 286
Query: 306 LRYDHQDRLTAREAMAHPYFAQ 327
L D R++A EA+AH YF+Q
Sbjct: 287 LVLDSDQRVSAAEALAHAYFSQ 308
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 121/202 (59%), Gaps = 14/202 (6%)
Query: 128 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 187
L+D +++ +Y+LL+ L Y HS GI+HRD+KP NV ++ + +LR++D+GLA +
Sbjct: 127 ALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNED-SELRILDFGLAR--QADE 183
Query: 188 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 247
E VA+R+++ PE++++ Y+ ++D+WS+GC+ A ++ + + F G D DQL +I
Sbjct: 184 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-QGKALFPGSDYIDQLKRIM 242
Query: 248 KVLGT--DELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKL 305
+V+GT E+ A ++ H + +L + S F A+ P AID L ++
Sbjct: 243 EVVGTPSPEVLAKISSEHART--YIQSLPPMPQKDLSSIFRGAN------PLAIDLLGRM 294
Query: 306 LRYDHQDRLTAREAMAHPYFAQ 327
L D R++A EA+AH YF+Q
Sbjct: 295 LVLDSDQRVSAAEALAHAYFSQ 316
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 121/202 (59%), Gaps = 14/202 (6%)
Query: 128 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 187
L+D +++ +Y+LL+ L Y HS GI+HRD+KP NV ++ + +LR++D+GLA +
Sbjct: 127 ALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNED-SELRILDFGLAR--QADE 183
Query: 188 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 247
E VA+R+++ PE++++ Y+ ++D+WS+GC+ A ++ + + F G D DQL +I
Sbjct: 184 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-QGKALFPGSDYIDQLKRIM 242
Query: 248 KVLGT--DELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKL 305
+V+GT E+ A ++ H + +L + S F A+ P AID L ++
Sbjct: 243 EVVGTPSPEVLAKISSEHART--YIQSLPPMPQKDLSSIFRGAN------PLAIDLLGRM 294
Query: 306 LRYDHQDRLTAREAMAHPYFAQ 327
L D R++A EA+AH YF+Q
Sbjct: 295 LVLDSDQRVSAAEALAHAYFSQ 316
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 143/251 (56%), Gaps = 34/251 (13%)
Query: 94 NVVKLLDIVRDQHSKTPSL-------IFEYVNSTDFKVLYPT--LTDYDIRYYIYELLKA 144
N++ + DI+R P++ I + + TD L T L++ I Y++Y++L+
Sbjct: 84 NIIGINDIIR-----APTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 138
Query: 145 LDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKG 200
L Y HS ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++
Sbjct: 139 LKYIHSANVLHRDLKPSNLLLN-TTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 197
Query: 201 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT---DELNA 257
PE++++ + Y S+D+WS+GC+ A M+ + P F G DQL I +LG+ ++LN
Sbjct: 198 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQEDLNC 256
Query: 258 YLNKYHLELDPQLDALVGRHSRKPWSK-FINADNQHLVSPEAIDFLDKLLRYDHQDRLTA 316
+N L+ L +L + ++ PW++ F NAD++ A+D LDK+L ++ R+
Sbjct: 257 GIN---LKARNYLLSLPHK-NKVPWNRLFPNADSK------ALDLLDKMLTFNPHKRIEV 306
Query: 317 REAMAHPYFAQ 327
+A+AHPY AQ
Sbjct: 307 EQALAHPYLAQ 317
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 142/246 (57%), Gaps = 24/246 (9%)
Query: 94 NVVKLLDIVRD---QHSKTPSLIFEYVNSTDFKVLYPT-LTDYDIRYYIYELLKALDYCH 149
N++ + DI+R + K L+ + + +K+L L++ I Y++Y++L+ L Y H
Sbjct: 102 NIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIH 161
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKGPELLV 205
S ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++ PE+++
Sbjct: 162 SANVLHRDLKPSNLLLN-TTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 220
Query: 206 DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT---DELNAYLNKY 262
+ + Y S+D+WS+GC+ A M+ + P F G DQL I +LG+ ++LN +N
Sbjct: 221 NSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQEDLNCIIN-- 277
Query: 263 HLELDPQLDALVGRHSRKPWSK-FINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMA 321
L+ L +L + ++ PW++ F NAD++ A+D LDK+L ++ R+ +A+A
Sbjct: 278 -LKARNYLLSLPHK-NKVPWNRLFPNADSK------ALDLLDKMLTFNPHKRIEVEQALA 329
Query: 322 HPYFAQ 327
HPY Q
Sbjct: 330 HPYLEQ 335
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 142/251 (56%), Gaps = 34/251 (13%)
Query: 94 NVVKLLDIVRDQHSKTPSL-------IFEYVNSTDFKVLYPT--LTDYDIRYYIYELLKA 144
N++ + DI+R P++ I + + TD L T L++ I Y++Y++L+
Sbjct: 86 NIIGINDIIR-----APTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 140
Query: 145 LDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYN----VRVASRYFKG 200
L Y HS ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++
Sbjct: 141 LKYIHSANVLHRDLKPSNLLLNTTC-DLKICDFGLARVADPDHDHTGFLXEXVATRWYRA 199
Query: 201 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT---DELNA 257
PE++++ + Y S+D+WS+GC+ A M+ + P F G DQL I +LG+ ++LN
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQEDLNC 258
Query: 258 YLNKYHLELDPQLDALVGRHSRKPWSK-FINADNQHLVSPEAIDFLDKLLRYDHQDRLTA 316
+N L+ L +L + ++ PW++ F NAD++ A+D LDK+L ++ R+
Sbjct: 259 IIN---LKARNYLLSLPHK-NKVPWNRLFPNADSK------ALDLLDKMLTFNPHKRIEV 308
Query: 317 REAMAHPYFAQ 327
+A+AHPY Q
Sbjct: 309 EQALAHPYLEQ 319
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 139/246 (56%), Gaps = 24/246 (9%)
Query: 94 NVVKLLDIVRDQ--HSKTPSLIFEYVNSTDFKVLYPT--LTDYDIRYYIYELLKALDYCH 149
NV+ + DI+R + I + + TD L + L++ I Y++Y++L+ L Y H
Sbjct: 102 NVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIH 161
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKGPELLV 205
S ++HRD+KP N++I+ L++ D+GLA P ++ VA+R+++ PE+++
Sbjct: 162 SANVLHRDLKPSNLLINTTC-DLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIML 220
Query: 206 DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT---DELNAYLNKY 262
+ + Y S+D+WS+GC+ A M+ + P F G DQL I +LG+ ++LN +N
Sbjct: 221 NSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQEDLNCIIN-- 277
Query: 263 HLELDPQLDALVGRHSRKPWSK-FINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMA 321
++ L +L + ++ W+K F +D++ A+D LD++L ++ R+T EA+A
Sbjct: 278 -MKARNYLQSLPSK-TKVAWAKLFPKSDSK------ALDLLDRMLTFNPNKRITVEEALA 329
Query: 322 HPYFAQ 327
HPY Q
Sbjct: 330 HPYLEQ 335
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 142/251 (56%), Gaps = 34/251 (13%)
Query: 94 NVVKLLDIVRDQHSKTPSL-------IFEYVNSTDFKVLYPT--LTDYDIRYYIYELLKA 144
N++ + DI+R P++ I + + TD L T L++ I Y++Y++L+
Sbjct: 87 NIIGINDIIR-----APTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 141
Query: 145 LDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYN----VRVASRYFKG 200
L Y HS ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++
Sbjct: 142 LKYIHSANVLHRDLKPSNLLLNTTC-DLKICDFGLARVADPDHDHTGFLXEXVATRWYRA 200
Query: 201 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT---DELNA 257
PE++++ + Y S+D+WS+GC+ A M+ + P F G DQL I +LG+ ++LN
Sbjct: 201 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQEDLNC 259
Query: 258 YLNKYHLELDPQLDALVGRHSRKPWSK-FINADNQHLVSPEAIDFLDKLLRYDHQDRLTA 316
+N L+ L +L + ++ PW++ F NAD++ A+D LDK+L ++ R+
Sbjct: 260 IIN---LKARNYLLSLPHK-NKVPWNRLFPNADSK------ALDLLDKMLTFNPHKRIEV 309
Query: 317 REAMAHPYFAQ 327
+A+AHPY Q
Sbjct: 310 EQALAHPYLEQ 320
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 141/251 (56%), Gaps = 34/251 (13%)
Query: 94 NVVKLLDIVRDQHSKTPSL-------IFEYVNSTDFKVLYPT--LTDYDIRYYIYELLKA 144
N++ + DI+R P++ I + + TD L T L++ I Y++Y++L+
Sbjct: 80 NIIGINDIIR-----APTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 134
Query: 145 LDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKG 200
L Y HS ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++
Sbjct: 135 LKYIHSANVLHRDLKPSNLLLNTTC-DLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 193
Query: 201 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDE---LNA 257
PE++++ + Y S+D+WS+GC+ A M+ + P F G DQL I +LG+ E LN
Sbjct: 194 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPEQEDLNC 252
Query: 258 YLNKYHLELDPQLDALVGRHSRKPWSK-FINADNQHLVSPEAIDFLDKLLRYDHQDRLTA 316
+N L+ L +L + ++ PW++ F NAD++ A+D LDK+L ++ R+
Sbjct: 253 IIN---LKARNYLLSLPHK-NKVPWNRLFPNADSK------ALDLLDKMLTFNPHKRIEV 302
Query: 317 REAMAHPYFAQ 327
+A+AHPY Q
Sbjct: 303 EQALAHPYLEQ 313
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 142/251 (56%), Gaps = 34/251 (13%)
Query: 94 NVVKLLDIVRDQHSKTPSL-------IFEYVNSTDFKVLYPT--LTDYDIRYYIYELLKA 144
N++ + DI+R P++ I + + TD L T L++ I Y++Y++L+
Sbjct: 102 NIIGINDIIR-----APTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 156
Query: 145 LDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKG 200
L Y HS ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++
Sbjct: 157 LKYIHSANVLHRDLKPSNLLLNTTC-DLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 215
Query: 201 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT---DELNA 257
PE++++ + Y S+D+WS+GC+ A M+ + P F G DQL I +LG+ ++LN
Sbjct: 216 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQEDLNC 274
Query: 258 YLNKYHLELDPQLDALVGRHSRKPWSK-FINADNQHLVSPEAIDFLDKLLRYDHQDRLTA 316
+N L+ L +L + ++ PW++ F NAD++ A+D LDK+L ++ R+
Sbjct: 275 IIN---LKARNYLLSLPHK-NKVPWNRLFPNADSK------ALDLLDKMLTFNPHKRIEV 324
Query: 317 REAMAHPYFAQ 327
+A+AHPY Q
Sbjct: 325 EQALAHPYLEQ 335
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 142/251 (56%), Gaps = 34/251 (13%)
Query: 94 NVVKLLDIVRDQHSKTPSL-------IFEYVNSTDFKVLYPT--LTDYDIRYYIYELLKA 144
N++ + DI+R P++ I + + TD L T L++ I Y++Y++L+
Sbjct: 82 NIIGINDIIR-----APTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 136
Query: 145 LDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKG 200
L Y HS ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++
Sbjct: 137 LKYIHSANVLHRDLKPSNLLLN-TTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 201 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT---DELNA 257
PE++++ + Y S+D+WS+GC+ A M+ + P F G DQL I +LG+ ++LN
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQEDLNC 254
Query: 258 YLNKYHLELDPQLDALVGRHSRKPWSK-FINADNQHLVSPEAIDFLDKLLRYDHQDRLTA 316
+N L+ L +L + ++ PW++ F NAD++ A+D LDK+L ++ R+
Sbjct: 255 IIN---LKARNYLLSLPHK-NKVPWNRLFPNADSK------ALDLLDKMLTFNPHKRIEV 304
Query: 317 REAMAHPYFAQ 327
+A+AHPY Q
Sbjct: 305 EQALAHPYLEQ 315
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 142/251 (56%), Gaps = 34/251 (13%)
Query: 94 NVVKLLDIVRDQHSKTPSL-------IFEYVNSTDFKVLYPT--LTDYDIRYYIYELLKA 144
N++ + DI+R P++ I + + TD L T L++ I Y++Y++L+
Sbjct: 86 NIIGINDIIR-----APTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 140
Query: 145 LDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKG 200
L Y HS ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++
Sbjct: 141 LKYIHSANVLHRDLKPSNLLLN-TTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 201 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT---DELNA 257
PE++++ + Y S+D+WS+GC+ A M+ + P F G DQL I +LG+ ++LN
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQEDLNC 258
Query: 258 YLNKYHLELDPQLDALVGRHSRKPWSK-FINADNQHLVSPEAIDFLDKLLRYDHQDRLTA 316
+N L+ L +L + ++ PW++ F NAD++ A+D LDK+L ++ R+
Sbjct: 259 IIN---LKARNYLLSLPHK-NKVPWNRLFPNADSK------ALDLLDKMLTFNPHKRIEV 308
Query: 317 REAMAHPYFAQ 327
+A+AHPY Q
Sbjct: 309 EQALAHPYLEQ 319
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 142/251 (56%), Gaps = 34/251 (13%)
Query: 94 NVVKLLDIVRDQHSKTPSL-------IFEYVNSTDFKVLYPT--LTDYDIRYYIYELLKA 144
N++ + DI+R P++ I + + TD L T L++ I Y++Y++L+
Sbjct: 82 NIIGINDIIR-----APTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 136
Query: 145 LDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKG 200
L Y HS ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++
Sbjct: 137 LKYIHSANVLHRDLKPSNLLLNTTC-DLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 201 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT---DELNA 257
PE++++ + Y S+D+WS+GC+ A M+ + P F G DQL I +LG+ ++LN
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQEDLNC 254
Query: 258 YLNKYHLELDPQLDALVGRHSRKPWSK-FINADNQHLVSPEAIDFLDKLLRYDHQDRLTA 316
+N L+ L +L + ++ PW++ F NAD++ A+D LDK+L ++ R+
Sbjct: 255 IIN---LKARNYLLSLPHK-NKVPWNRLFPNADSK------ALDLLDKMLTFNPHKRIEV 304
Query: 317 REAMAHPYFAQ 327
+A+AHPY Q
Sbjct: 305 EQALAHPYLEQ 315
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 135/254 (53%), Gaps = 29/254 (11%)
Query: 93 PNVVKLLDIV-----RDQHSKTPSLIFEYVNST---------DFKVLYPTLTDYDIRYYI 138
PN+V+L RD+ +++ EYV T +V P + I+ ++
Sbjct: 79 PNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPIL---IKVFL 135
Query: 139 YELLKALDYCH--SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 196
++L++++ H S + HRD+KPHNV+++ L+L D+G A+ P + + SR
Sbjct: 136 FQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSR 195
Query: 197 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG--TDE 254
Y++ PEL+ Q Y ++D+WS+GC+FA M+ EP F G ++ QL +I +VLG + E
Sbjct: 196 YYRAPELIFGNQHYTTAVDIWSVGCIFAEMML-GEPIFRGDNSAGQLHEIVRVLGCPSRE 254
Query: 255 LNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRL 314
+ LN H ++D + PWS + +D+ + EA D L LL+Y ++R+
Sbjct: 255 VLRKLNPSHTDVD------LYNSKGIPWSN-VFSDHSLKDAKEAYDLLSALLQYLPEERM 307
Query: 315 TAREAMAHPYFAQV 328
EA+ HPYF ++
Sbjct: 308 KPYEALCHPYFDEL 321
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 142/251 (56%), Gaps = 34/251 (13%)
Query: 94 NVVKLLDIVRDQHSKTPSL-------IFEYVNSTDFKVLYPT--LTDYDIRYYIYELLKA 144
N++ + DI+R P++ I + + TD L T L++ I Y++Y++L+
Sbjct: 86 NIIGINDIIR-----APTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 140
Query: 145 LDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKG 200
L Y HS ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++
Sbjct: 141 LKYIHSANVLHRDLKPSNLLLN-TTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 201 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT---DELNA 257
PE++++ + Y S+D+WS+GC+ A M+ + P F G DQL I +LG+ ++LN
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQEDLNC 258
Query: 258 YLNKYHLELDPQLDALVGRHSRKPWSK-FINADNQHLVSPEAIDFLDKLLRYDHQDRLTA 316
+N L+ L +L + ++ PW++ F NAD++ A+D LDK+L ++ R+
Sbjct: 259 IIN---LKARNYLLSLPHK-NKVPWNRLFPNADSK------ALDLLDKMLTFNPHKRIEV 308
Query: 317 REAMAHPYFAQ 327
+A+AHPY Q
Sbjct: 309 EQALAHPYLEQ 319
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 142/251 (56%), Gaps = 34/251 (13%)
Query: 94 NVVKLLDIVRDQHSKTPSL-------IFEYVNSTDFKVLYPT--LTDYDIRYYIYELLKA 144
N++ + DI+R P++ I + + TD L T L++ I Y++Y++L+
Sbjct: 90 NIIGINDIIR-----APTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 144
Query: 145 LDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKG 200
L Y HS ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++
Sbjct: 145 LKYIHSANVLHRDLKPSNLLLNTTC-DLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 203
Query: 201 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT---DELNA 257
PE++++ + Y S+D+WS+GC+ A M+ + P F G DQL I +LG+ ++LN
Sbjct: 204 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQEDLNC 262
Query: 258 YLNKYHLELDPQLDALVGRHSRKPWSK-FINADNQHLVSPEAIDFLDKLLRYDHQDRLTA 316
+N L+ L +L + ++ PW++ F NAD++ A+D LDK+L ++ R+
Sbjct: 263 IIN---LKARNYLLSLPHK-NKVPWNRLFPNADSK------ALDLLDKMLTFNPHKRIEV 312
Query: 317 REAMAHPYFAQ 327
+A+AHPY Q
Sbjct: 313 EQALAHPYLEQ 323
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 142/251 (56%), Gaps = 34/251 (13%)
Query: 94 NVVKLLDIVRDQHSKTPSL-------IFEYVNSTDFKVLYPT--LTDYDIRYYIYELLKA 144
N++ + DI+R P++ I + + TD L T L++ I Y++Y++L+
Sbjct: 82 NIIGINDIIR-----APTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 136
Query: 145 LDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKG 200
L Y HS ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++
Sbjct: 137 LKYIHSANVLHRDLKPSNLLLNTTC-DLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 201 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT---DELNA 257
PE++++ + Y S+D+WS+GC+ A M+ + P F G DQL I +LG+ ++LN
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQEDLNC 254
Query: 258 YLNKYHLELDPQLDALVGRHSRKPWSK-FINADNQHLVSPEAIDFLDKLLRYDHQDRLTA 316
+N L+ L +L + ++ PW++ F NAD++ A+D LDK+L ++ R+
Sbjct: 255 IIN---LKARNYLLSLPHK-NKVPWNRLFPNADSK------ALDLLDKMLTFNPHKRIEV 304
Query: 317 REAMAHPYFAQ 327
+A+AHPY Q
Sbjct: 305 EQALAHPYLEQ 315
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 142/251 (56%), Gaps = 34/251 (13%)
Query: 94 NVVKLLDIVRDQHSKTPSL-------IFEYVNSTDFKVLYPT--LTDYDIRYYIYELLKA 144
N++ + DI+R P++ I + + TD L T L++ I Y++Y++L+
Sbjct: 80 NIIGINDIIR-----APTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 134
Query: 145 LDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKG 200
L Y HS ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++
Sbjct: 135 LKYIHSANVLHRDLKPSNLLLNTTC-DLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 193
Query: 201 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT---DELNA 257
PE++++ + Y S+D+WS+GC+ A M+ + P F G DQL I +LG+ ++LN
Sbjct: 194 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQEDLNC 252
Query: 258 YLNKYHLELDPQLDALVGRHSRKPWSK-FINADNQHLVSPEAIDFLDKLLRYDHQDRLTA 316
+N L+ L +L + ++ PW++ F NAD++ A+D LDK+L ++ R+
Sbjct: 253 IIN---LKARNYLLSLPHK-NKVPWNRLFPNADSK------ALDLLDKMLTFNPHKRIEV 302
Query: 317 REAMAHPYFAQ 327
+A+AHPY Q
Sbjct: 303 EQALAHPYLEQ 313
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 142/251 (56%), Gaps = 34/251 (13%)
Query: 94 NVVKLLDIVRDQHSKTPSL-------IFEYVNSTDFKVLYPT--LTDYDIRYYIYELLKA 144
N++ + DI+R P++ I + + TD L T L++ I Y++Y++L+
Sbjct: 84 NIIGINDIIR-----APTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 138
Query: 145 LDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKG 200
L Y HS ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++
Sbjct: 139 LKYIHSANVLHRDLKPSNLLLNTTC-DLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 197
Query: 201 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT---DELNA 257
PE++++ + Y S+D+WS+GC+ A M+ + P F G DQL I +LG+ ++LN
Sbjct: 198 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQEDLNC 256
Query: 258 YLNKYHLELDPQLDALVGRHSRKPWSK-FINADNQHLVSPEAIDFLDKLLRYDHQDRLTA 316
+N L+ L +L + ++ PW++ F NAD++ A+D LDK+L ++ R+
Sbjct: 257 IIN---LKARNYLLSLPHK-NKVPWNRLFPNADSK------ALDLLDKMLTFNPHKRIEV 306
Query: 317 REAMAHPYFAQ 327
+A+AHPY Q
Sbjct: 307 EQALAHPYLEQ 317
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 118 bits (295), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 142/251 (56%), Gaps = 34/251 (13%)
Query: 94 NVVKLLDIVRDQHSKTPSL-------IFEYVNSTDFKVLYPT--LTDYDIRYYIYELLKA 144
N++ + DI+R P++ I + + TD L T L++ I Y++Y++L+
Sbjct: 82 NIIGINDIIR-----APTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 136
Query: 145 LDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKG 200
L Y HS ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++
Sbjct: 137 LKYIHSANVLHRDLKPSNLLLN-TTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 201 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT---DELNA 257
PE++++ + Y S+D+WS+GC+ A M+ + P F G DQL I +LG+ ++LN
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQEDLNX 254
Query: 258 YLNKYHLELDPQLDALVGRHSRKPWSK-FINADNQHLVSPEAIDFLDKLLRYDHQDRLTA 316
+N L+ L +L + ++ PW++ F NAD++ A+D LDK+L ++ R+
Sbjct: 255 IIN---LKARNYLLSLPHK-NKVPWNRLFPNADSK------ALDLLDKMLTFNPHKRIEV 304
Query: 317 REAMAHPYFAQ 327
+A+AHPY Q
Sbjct: 305 EQALAHPYLEQ 315
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 118 bits (295), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 142/251 (56%), Gaps = 34/251 (13%)
Query: 94 NVVKLLDIVRDQHSKTPSL-------IFEYVNSTDFKVLYPT--LTDYDIRYYIYELLKA 144
N++ + DI+R P++ I + + TD L T L++ I Y++Y++L+
Sbjct: 87 NIIGINDIIR-----APTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 141
Query: 145 LDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKG 200
L Y HS ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++
Sbjct: 142 LKYIHSANVLHRDLKPSNLLLNTTC-DLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 200
Query: 201 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT---DELNA 257
PE++++ + Y S+D+WS+GC+ A M+ + P F G DQL I +LG+ ++LN
Sbjct: 201 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQEDLNC 259
Query: 258 YLNKYHLELDPQLDALVGRHSRKPWSK-FINADNQHLVSPEAIDFLDKLLRYDHQDRLTA 316
+N L+ L +L + ++ PW++ F NAD++ A+D LDK+L ++ R+
Sbjct: 260 IIN---LKARNYLLSLPHK-NKVPWNRLFPNADSK------ALDLLDKMLTFNPHKRIEV 309
Query: 317 REAMAHPYFAQ 327
+A+AHPY Q
Sbjct: 310 EQALAHPYLEQ 320
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 118 bits (295), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 142/251 (56%), Gaps = 34/251 (13%)
Query: 94 NVVKLLDIVRDQHSKTPSL-------IFEYVNSTDFKVLYPT--LTDYDIRYYIYELLKA 144
N++ + DI+R P++ I + + TD L T L++ I Y++Y++L+
Sbjct: 88 NIIGINDIIR-----APTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 142
Query: 145 LDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKG 200
L Y HS ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++
Sbjct: 143 LKYIHSANVLHRDLKPSNLLLNTTC-DLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 201
Query: 201 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT---DELNA 257
PE++++ + Y S+D+WS+GC+ A M+ + P F G DQL I +LG+ ++LN
Sbjct: 202 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQEDLNC 260
Query: 258 YLNKYHLELDPQLDALVGRHSRKPWSK-FINADNQHLVSPEAIDFLDKLLRYDHQDRLTA 316
+N L+ L +L + ++ PW++ F NAD++ A+D LDK+L ++ R+
Sbjct: 261 IIN---LKARNYLLSLPHK-NKVPWNRLFPNADSK------ALDLLDKMLTFNPHKRIEV 310
Query: 317 REAMAHPYFAQ 327
+A+AHPY Q
Sbjct: 311 EQALAHPYLEQ 321
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 118 bits (295), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 142/251 (56%), Gaps = 34/251 (13%)
Query: 94 NVVKLLDIVRDQHSKTPSL-------IFEYVNSTDFKVLYPT--LTDYDIRYYIYELLKA 144
N++ + DI+R P++ I + + TD L T L++ I Y++Y++L+
Sbjct: 79 NIIGINDIIR-----APTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 133
Query: 145 LDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKG 200
L Y HS ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++
Sbjct: 134 LKYIHSANVLHRDLKPSNLLLNTTC-DLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 192
Query: 201 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT---DELNA 257
PE++++ + Y S+D+WS+GC+ A M+ + P F G DQL I +LG+ ++LN
Sbjct: 193 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQEDLNC 251
Query: 258 YLNKYHLELDPQLDALVGRHSRKPWSK-FINADNQHLVSPEAIDFLDKLLRYDHQDRLTA 316
+N L+ L +L + ++ PW++ F NAD++ A+D LDK+L ++ R+
Sbjct: 252 IIN---LKARNYLLSLPHK-NKVPWNRLFPNADSK------ALDLLDKMLTFNPHKRIEV 301
Query: 317 REAMAHPYFAQ 327
+A+AHPY Q
Sbjct: 302 EQALAHPYLEQ 312
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 118 bits (295), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 142/251 (56%), Gaps = 34/251 (13%)
Query: 94 NVVKLLDIVRDQHSKTPSL-------IFEYVNSTDFKVLYPT--LTDYDIRYYIYELLKA 144
N++ + DI+R P++ I + + TD L T L++ I Y++Y++L+
Sbjct: 86 NIIGINDIIR-----APTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 140
Query: 145 LDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKG 200
L Y HS ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++
Sbjct: 141 LKYIHSANVLHRDLKPSNLLLNTTC-DLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 201 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT---DELNA 257
PE++++ + Y S+D+WS+GC+ A M+ + P F G DQL I +LG+ ++LN
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQEDLNC 258
Query: 258 YLNKYHLELDPQLDALVGRHSRKPWSK-FINADNQHLVSPEAIDFLDKLLRYDHQDRLTA 316
+N L+ L +L + ++ PW++ F NAD++ A+D LDK+L ++ R+
Sbjct: 259 IIN---LKARNYLLSLPHK-NKVPWNRLFPNADSK------ALDLLDKMLTFNPHKRIEV 308
Query: 317 REAMAHPYFAQ 327
+A+AHPY Q
Sbjct: 309 EQALAHPYLEQ 319
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 118 bits (295), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 143/246 (58%), Gaps = 24/246 (9%)
Query: 94 NVVKLLDIVRD---QHSKTPSLIFEYVNSTDFKVLYPT-LTDYDIRYYIYELLKALDYCH 149
N++ + DI+R + K ++ + + + +K+L L++ I Y++Y++L+ L Y H
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 145
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKGPELLV 205
S ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++ PE+++
Sbjct: 146 SANVLHRDLKPSNLLLNTTC-DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 206 DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT---DELNAYLNKY 262
+ + Y S+D+WS+GC+ A M+ + P F G DQL I +LG+ ++LN +N
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQEDLNCIIN-- 261
Query: 263 HLELDPQLDALVGRHSRKPWSK-FINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMA 321
L+ L +L + ++ PW++ F NAD++ A+D LDK+L ++ R+ +A+A
Sbjct: 262 -LKARNYLLSLPHK-NKVPWNRLFPNADSK------ALDLLDKMLTFNPHKRIEVEQALA 313
Query: 322 HPYFAQ 327
HPY Q
Sbjct: 314 HPYLEQ 319
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 142/251 (56%), Gaps = 34/251 (13%)
Query: 94 NVVKLLDIVRDQHSKTPSL-------IFEYVNSTDFKVLYPT--LTDYDIRYYIYELLKA 144
N++ + DI+R P++ I + + TD L T L++ I Y++Y++L+
Sbjct: 82 NIIGINDIIR-----APTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 136
Query: 145 LDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKG 200
L Y HS ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++
Sbjct: 137 LKYIHSANVLHRDLKPSNLLLN-TTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 201 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT---DELNA 257
PE++++ + Y S+D+WS+GC+ A M+ + P F G DQL I +LG+ ++LN
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQEDLNX 254
Query: 258 YLNKYHLELDPQLDALVGRHSRKPWSK-FINADNQHLVSPEAIDFLDKLLRYDHQDRLTA 316
+N L+ L +L + ++ PW++ F NAD++ A+D LDK+L ++ R+
Sbjct: 255 IIN---LKARNYLLSLPHK-NKVPWNRLFPNADSK------ALDLLDKMLTFNPHKRIEV 304
Query: 317 REAMAHPYFAQ 327
+A+AHPY Q
Sbjct: 305 EQALAHPYLEQ 315
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 143/246 (58%), Gaps = 24/246 (9%)
Query: 94 NVVKLLDIVRD---QHSKTPSLIFEYVNSTDFKVLYPT-LTDYDIRYYIYELLKALDYCH 149
N++ + DI+R + K ++ + + + +K+L L++ I Y++Y++L+ L Y H
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIH 145
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKGPELLV 205
S ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++ PE+++
Sbjct: 146 SANVLHRDLKPSNLLLNTTC-DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 206 DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT---DELNAYLNKY 262
+ + Y S+D+WS+GC+ A M+ + P F G DQL I +LG+ ++LN +N
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQEDLNCIIN-- 261
Query: 263 HLELDPQLDALVGRHSRKPWSK-FINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMA 321
L+ L +L + ++ PW++ F NAD++ A+D LDK+L ++ R+ +A+A
Sbjct: 262 -LKARNYLLSLPHK-NKVPWNRLFPNADSK------ALDLLDKMLTFNPHKRIEVEQALA 313
Query: 322 HPYFAQ 327
HPY Q
Sbjct: 314 HPYLEQ 319
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 114/199 (57%), Gaps = 10/199 (5%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 188
LTD +++ IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++D+GLA H E
Sbjct: 129 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLAR--HTADE 185
Query: 189 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
VA+R+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +
Sbjct: 186 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILR 244
Query: 249 VLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRY 308
++GT + +L + FI A+ P A+D L+K+L
Sbjct: 245 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN------PLAVDLLEKMLVL 298
Query: 309 DHQDRLTAREAMAHPYFAQ 327
D R+TA +A+AH YFAQ
Sbjct: 299 DSDKRITAAQALAHAYFAQ 317
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 114/199 (57%), Gaps = 10/199 (5%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 188
LTD +++ IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++D+GLA H E
Sbjct: 129 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLAR--HTADE 185
Query: 189 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
VA+R+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +
Sbjct: 186 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILR 244
Query: 249 VLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRY 308
++GT + +L + FI A+ P A+D L+K+L
Sbjct: 245 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN------PLAVDLLEKMLVL 298
Query: 309 DHQDRLTAREAMAHPYFAQ 327
D R+TA +A+AH YFAQ
Sbjct: 299 DSDKRITAAQALAHAYFAQ 317
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 114/199 (57%), Gaps = 10/199 (5%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 188
LTD +++ IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++D+GLA H E
Sbjct: 129 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLAR--HTADE 185
Query: 189 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
VA+R+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +
Sbjct: 186 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILR 244
Query: 249 VLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRY 308
++GT + +L + FI A+ P A+D L+K+L
Sbjct: 245 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN------PLAVDLLEKMLVL 298
Query: 309 DHQDRLTAREAMAHPYFAQ 327
D R+TA +A+AH YFAQ
Sbjct: 299 DSDKRITAAQALAHAYFAQ 317
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 114/199 (57%), Gaps = 10/199 (5%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 188
LTD +++ IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++D+GLA H E
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLAR--HTDDE 178
Query: 189 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
VA+R+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +
Sbjct: 179 MTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILR 237
Query: 249 VLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRY 308
++GT + +L + FI A+ P A+D L+K+L
Sbjct: 238 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN------PLAVDLLEKMLVL 291
Query: 309 DHQDRLTAREAMAHPYFAQ 327
D R+TA +A+AH YFAQ
Sbjct: 292 DSDKRITAAQALAHAYFAQ 310
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 114/199 (57%), Gaps = 10/199 (5%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 188
LTD +++ IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++D+GLA H E
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLAR--HTDDE 178
Query: 189 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
VA+R+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +
Sbjct: 179 MTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILR 237
Query: 249 VLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRY 308
++GT + +L + FI A+ P A+D L+K+L
Sbjct: 238 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN------PLAVDLLEKMLVL 291
Query: 309 DHQDRLTAREAMAHPYFAQ 327
D R+TA +A+AH YFAQ
Sbjct: 292 DSDKRITAAQALAHAYFAQ 310
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 143/311 (45%), Gaps = 31/311 (9%)
Query: 32 VIFSDQDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXX----XLQ 87
I+ + Y+ + VG G Y V + T R L
Sbjct: 12 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 71
Query: 88 NLCGGPNVVKLLDIVRDQHSKTPSLIFEYVN---------STDFK--VLYPTLTDYDIRY 136
NV+ LLD+ TP+ E N D V LTD +++
Sbjct: 72 KHMKHENVIGLLDVF------TPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQF 125
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 196
IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++D+GLA H E VA+R
Sbjct: 126 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLAR--HTDDEMTGYVATR 182
Query: 197 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELN 256
+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 183 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGTPGAE 241
Query: 257 AYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTA 316
+ +L + FI A+ P A+D L+K+L D R+TA
Sbjct: 242 LLKKISSESARNYIQSLAQMPKMNFANVFIGAN------PLAVDLLEKMLVLDSDKRITA 295
Query: 317 REAMAHPYFAQ 327
+A+AH YFAQ
Sbjct: 296 AQALAHAYFAQ 306
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 114/199 (57%), Gaps = 10/199 (5%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 188
LTD +++ IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++D+GLA H E
Sbjct: 124 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED-SELKILDFGLAR--HTDDE 180
Query: 189 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
VA+R+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +
Sbjct: 181 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILR 239
Query: 249 VLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRY 308
++GT + +L + FI A+ P A+D L+K+L
Sbjct: 240 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN------PLAVDLLEKMLVL 293
Query: 309 DHQDRLTAREAMAHPYFAQ 327
D R+TA +A+AH YFAQ
Sbjct: 294 DSDKRITAAQALAHAYFAQ 312
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 114/199 (57%), Gaps = 10/199 (5%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 188
LTD +++ IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++D+GLA H E
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDYGLAR--HTDDE 178
Query: 189 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
VA+R+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +
Sbjct: 179 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILR 237
Query: 249 VLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRY 308
++GT + +L + FI A+ P A+D L+K+L
Sbjct: 238 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN------PLAVDLLEKMLVL 291
Query: 309 DHQDRLTAREAMAHPYFAQ 327
D R+TA +A+AH YFAQ
Sbjct: 292 DSDKRITAAQALAHAYFAQ 310
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 114/199 (57%), Gaps = 10/199 (5%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 188
LTD +++ IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++D+GLA H E
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLAR--HTDDE 178
Query: 189 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
VA+R+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +
Sbjct: 179 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILR 237
Query: 249 VLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRY 308
++GT + +L + FI A+ P A+D L+K+L
Sbjct: 238 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN------PLAVDLLEKMLVL 291
Query: 309 DHQDRLTAREAMAHPYFAQ 327
D R+TA +A+AH YFAQ
Sbjct: 292 DSDKRITAAQALAHAYFAQ 310
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 114/199 (57%), Gaps = 10/199 (5%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 188
LTD +++ IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++D+GLA H E
Sbjct: 127 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED-XELKILDFGLAR--HTDDE 183
Query: 189 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
VA+R+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +
Sbjct: 184 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILR 242
Query: 249 VLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRY 308
++GT + +L + FI A+ P A+D L+K+L
Sbjct: 243 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN------PLAVDLLEKMLVL 296
Query: 309 DHQDRLTAREAMAHPYFAQ 327
D R+TA +A+AH YFAQ
Sbjct: 297 DSDKRITAAQALAHAYFAQ 315
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 114/199 (57%), Gaps = 10/199 (5%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 188
LTD +++ IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++D+GLA H E
Sbjct: 134 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLAR--HTDDE 190
Query: 189 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
VA+R+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +
Sbjct: 191 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILR 249
Query: 249 VLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRY 308
++GT + +L + FI A+ P A+D L+K+L
Sbjct: 250 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN------PLAVDLLEKMLVL 303
Query: 309 DHQDRLTAREAMAHPYFAQ 327
D R+TA +A+AH YFAQ
Sbjct: 304 DSDKRITAAQALAHAYFAQ 322
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 114/199 (57%), Gaps = 10/199 (5%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 188
LTD +++ IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++D+GLA H E
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLAR--HTDDE 178
Query: 189 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
VA+R+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +
Sbjct: 179 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILR 237
Query: 249 VLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRY 308
++GT + +L + FI A+ P A+D L+K+L
Sbjct: 238 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN------PLAVDLLEKMLVL 291
Query: 309 DHQDRLTAREAMAHPYFAQ 327
D R+TA +A+AH YFAQ
Sbjct: 292 DSDKRITAAQALAHAYFAQ 310
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 114/199 (57%), Gaps = 10/199 (5%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 188
LTD +++ IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++D+GLA H E
Sbjct: 134 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLAR--HTDDE 190
Query: 189 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
VA+R+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +
Sbjct: 191 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILR 249
Query: 249 VLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRY 308
++GT + +L + FI A+ P A+D L+K+L
Sbjct: 250 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN------PLAVDLLEKMLVL 303
Query: 309 DHQDRLTAREAMAHPYFAQ 327
D R+TA +A+AH YFAQ
Sbjct: 304 DSDKRITAAQALAHAYFAQ 322
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 114/199 (57%), Gaps = 10/199 (5%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 188
LTD +++ IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++D+GLA H E
Sbjct: 124 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLAR--HTDDE 180
Query: 189 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
VA+R+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +
Sbjct: 181 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILR 239
Query: 249 VLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRY 308
++GT + +L + FI A+ P A+D L+K+L
Sbjct: 240 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN------PLAVDLLEKMLVL 293
Query: 309 DHQDRLTAREAMAHPYFAQ 327
D R+TA +A+AH YFAQ
Sbjct: 294 DSDKRITAAQALAHAYFAQ 312
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 114/199 (57%), Gaps = 10/199 (5%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 188
LTD +++ IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++D+GLA H E
Sbjct: 127 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED-XELKILDFGLAR--HTDDE 183
Query: 189 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
VA+R+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +
Sbjct: 184 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILR 242
Query: 249 VLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRY 308
++GT + +L + FI A+ P A+D L+K+L
Sbjct: 243 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN------PLAVDLLEKMLVL 296
Query: 309 DHQDRLTAREAMAHPYFAQ 327
D R+TA +A+AH YFAQ
Sbjct: 297 DSDKRITAAQALAHAYFAQ 315
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 114/199 (57%), Gaps = 10/199 (5%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 188
LTD +++ IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++D+GLA H E
Sbjct: 124 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLAR--HTDDE 180
Query: 189 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
VA+R+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +
Sbjct: 181 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILR 239
Query: 249 VLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRY 308
++GT + +L + FI A+ P A+D L+K+L
Sbjct: 240 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN------PLAVDLLEKMLVL 293
Query: 309 DHQDRLTAREAMAHPYFAQ 327
D R+TA +A+AH YFAQ
Sbjct: 294 DSDKRITAAQALAHAYFAQ 312
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 114/199 (57%), Gaps = 10/199 (5%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 188
LTD +++ IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++D+GLA H E
Sbjct: 120 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLAR--HTDDE 176
Query: 189 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
VA+R+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +
Sbjct: 177 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILR 235
Query: 249 VLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRY 308
++GT + +L + FI A+ P A+D L+K+L
Sbjct: 236 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN------PLAVDLLEKMLVL 289
Query: 309 DHQDRLTAREAMAHPYFAQ 327
D R+TA +A+AH YFAQ
Sbjct: 290 DSDKRITAAQALAHAYFAQ 308
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 143/311 (45%), Gaps = 31/311 (9%)
Query: 32 VIFSDQDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXX----XLQ 87
I+ + Y+ + VG G Y V + T R L
Sbjct: 36 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 95
Query: 88 NLCGGPNVVKLLDIVRDQHSKTPSLIFEYVN---------STDFK--VLYPTLTDYDIRY 136
NV+ LLD+ TP+ E N D V LTD +++
Sbjct: 96 KHMKHENVIGLLDVF------TPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 149
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 196
IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++D+GLA H E VA+R
Sbjct: 150 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLAR--HTDDEMXGXVATR 206
Query: 197 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELN 256
+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 207 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGTPGAE 265
Query: 257 AYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTA 316
+ +L + FI A+ P A+D L+K+L D R+TA
Sbjct: 266 LLKKISSESARNYIQSLAQMPKMNFANVFIGAN------PLAVDLLEKMLVLDSDKRITA 319
Query: 317 REAMAHPYFAQ 327
+A+AH YFAQ
Sbjct: 320 AQALAHAYFAQ 330
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 114/199 (57%), Gaps = 10/199 (5%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 188
LTD +++ IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++D+GLA H E
Sbjct: 118 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLAR--HTDDE 174
Query: 189 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
VA+R+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +
Sbjct: 175 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILR 233
Query: 249 VLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRY 308
++GT + +L + FI A+ P A+D L+K+L
Sbjct: 234 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN------PLAVDLLEKMLVL 287
Query: 309 DHQDRLTAREAMAHPYFAQ 327
D R+TA +A+AH YFAQ
Sbjct: 288 DSDKRITAAQALAHAYFAQ 306
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 114/199 (57%), Gaps = 10/199 (5%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 188
LTD +++ IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++D+GLA H E
Sbjct: 134 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLAR--HTDDE 190
Query: 189 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
VA+R+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +
Sbjct: 191 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILR 249
Query: 249 VLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRY 308
++GT + +L + FI A+ P A+D L+K+L
Sbjct: 250 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN------PLAVDLLEKMLVL 303
Query: 309 DHQDRLTAREAMAHPYFAQ 327
D R+TA +A+AH YFAQ
Sbjct: 304 DSDKRITAAQALAHAYFAQ 322
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 114/199 (57%), Gaps = 10/199 (5%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 188
LTD +++ IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++D+GLA H E
Sbjct: 133 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED-XELKILDFGLAR--HTDDE 189
Query: 189 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
VA+R+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +
Sbjct: 190 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILR 248
Query: 249 VLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRY 308
++GT + +L + FI A+ P A+D L+K+L
Sbjct: 249 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN------PLAVDLLEKMLVL 302
Query: 309 DHQDRLTAREAMAHPYFAQ 327
D R+TA +A+AH YFAQ
Sbjct: 303 DSDKRITAAQALAHAYFAQ 321
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 114/199 (57%), Gaps = 10/199 (5%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 188
LTD +++ IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++D+GLA H E
Sbjct: 129 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLAR--HTDDE 185
Query: 189 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
VA+R+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +
Sbjct: 186 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILR 244
Query: 249 VLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRY 308
++GT + +L + FI A+ P A+D L+K+L
Sbjct: 245 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN------PLAVDLLEKMLVL 298
Query: 309 DHQDRLTAREAMAHPYFAQ 327
D R+TA +A+AH YFAQ
Sbjct: 299 DSDKRITAAQALAHAYFAQ 317
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 114/199 (57%), Gaps = 10/199 (5%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 188
LTD +++ IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++D+GLA H E
Sbjct: 141 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLAR--HTDDE 197
Query: 189 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
VA+R+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +
Sbjct: 198 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILR 256
Query: 249 VLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRY 308
++GT + +L + FI A+ P A+D L+K+L
Sbjct: 257 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN------PLAVDLLEKMLVL 310
Query: 309 DHQDRLTAREAMAHPYFAQ 327
D R+TA +A+AH YFAQ
Sbjct: 311 DSDKRITAAQALAHAYFAQ 329
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 114/199 (57%), Gaps = 10/199 (5%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 188
LTD +++ IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++D+GLA H E
Sbjct: 119 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLAR--HTDDE 175
Query: 189 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
VA+R+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +
Sbjct: 176 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILR 234
Query: 249 VLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRY 308
++GT + +L + FI A+ P A+D L+K+L
Sbjct: 235 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN------PLAVDLLEKMLVL 288
Query: 309 DHQDRLTAREAMAHPYFAQ 327
D R+TA +A+AH YFAQ
Sbjct: 289 DSDKRITAAQALAHAYFAQ 307
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 114/199 (57%), Gaps = 10/199 (5%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 188
LTD +++ IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++D+GLA H E
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLAR--HTDDE 178
Query: 189 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
VA+R+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +
Sbjct: 179 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILR 237
Query: 249 VLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRY 308
++GT + +L + FI A+ P A+D L+K+L
Sbjct: 238 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN------PLAVDLLEKMLVL 291
Query: 309 DHQDRLTAREAMAHPYFAQ 327
D R+TA +A+AH YFAQ
Sbjct: 292 DSDKRITAAQALAHAYFAQ 310
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 114/199 (57%), Gaps = 10/199 (5%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 188
LTD +++ IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++D+GLA H E
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLAR--HTDDE 178
Query: 189 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
VA+R+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +
Sbjct: 179 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILR 237
Query: 249 VLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRY 308
++GT + +L + FI A+ P A+D L+K+L
Sbjct: 238 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN------PLAVDLLEKMLVL 291
Query: 309 DHQDRLTAREAMAHPYFAQ 327
D R+TA +A+AH YFAQ
Sbjct: 292 DSDKRITAAQALAHAYFAQ 310
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 114/199 (57%), Gaps = 10/199 (5%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 188
LTD +++ IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++D+GLA H E
Sbjct: 128 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED-SELKILDFGLAR--HTDDE 184
Query: 189 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
VA+R+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +
Sbjct: 185 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILR 243
Query: 249 VLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRY 308
++GT + +L + FI A+ P A+D L+K+L
Sbjct: 244 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN------PLAVDLLEKMLVL 297
Query: 309 DHQDRLTAREAMAHPYFAQ 327
D R+TA +A+AH YFAQ
Sbjct: 298 DSDKRITAAQALAHAYFAQ 316
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 114/199 (57%), Gaps = 10/199 (5%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 188
LTD +++ IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++D+GLA H E
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLAR--HTDDE 178
Query: 189 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
VA+R+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +
Sbjct: 179 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILR 237
Query: 249 VLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRY 308
++GT + +L + FI A+ P A+D L+K+L
Sbjct: 238 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN------PLAVDLLEKMLVL 291
Query: 309 DHQDRLTAREAMAHPYFAQ 327
D R+TA +A+AH YFAQ
Sbjct: 292 DSDKRITAAQALAHAYFAQ 310
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 114/199 (57%), Gaps = 10/199 (5%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 188
LTD +++ IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++D+GLA H E
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED-XELKILDFGLAR--HTDDE 178
Query: 189 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
VA+R+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +
Sbjct: 179 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILR 237
Query: 249 VLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRY 308
++GT + +L + FI A+ P A+D L+K+L
Sbjct: 238 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN------PLAVDLLEKMLVL 291
Query: 309 DHQDRLTAREAMAHPYFAQ 327
D R+TA +A+AH YFAQ
Sbjct: 292 DSDKRITAAQALAHAYFAQ 310
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 114/199 (57%), Gaps = 10/199 (5%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 188
LTD +++ IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++D+GLA H E
Sbjct: 127 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLAR--HTDDE 183
Query: 189 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
VA+R+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +
Sbjct: 184 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILR 242
Query: 249 VLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRY 308
++GT + +L + FI A+ P A+D L+K+L
Sbjct: 243 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN------PLAVDLLEKMLVL 296
Query: 309 DHQDRLTAREAMAHPYFAQ 327
D R+TA +A+AH YFAQ
Sbjct: 297 DSDKRITAAQALAHAYFAQ 315
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 114/199 (57%), Gaps = 10/199 (5%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 188
LTD +++ IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++D+GLA H E
Sbjct: 121 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLAR--HTDDE 177
Query: 189 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
VA+R+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +
Sbjct: 178 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILR 236
Query: 249 VLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRY 308
++GT + +L + FI A+ P A+D L+K+L
Sbjct: 237 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN------PLAVDLLEKMLVL 290
Query: 309 DHQDRLTAREAMAHPYFAQ 327
D R+TA +A+AH YFAQ
Sbjct: 291 DSDKRITAAQALAHAYFAQ 309
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 114/199 (57%), Gaps = 10/199 (5%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 188
LTD +++ IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++D+GLA H E
Sbjct: 119 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLAR--HTDDE 175
Query: 189 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
VA+R+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +
Sbjct: 176 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILR 234
Query: 249 VLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRY 308
++GT + +L + FI A+ P A+D L+K+L
Sbjct: 235 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN------PLAVDLLEKMLVL 288
Query: 309 DHQDRLTAREAMAHPYFAQ 327
D R+TA +A+AH YFAQ
Sbjct: 289 DSDKRITAAQALAHAYFAQ 307
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 114/199 (57%), Gaps = 10/199 (5%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 188
LTD +++ IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++D+GLA H E
Sbjct: 127 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLAR--HTDDE 183
Query: 189 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
VA+R+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +
Sbjct: 184 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILR 242
Query: 249 VLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRY 308
++GT + +L + FI A+ P A+D L+K+L
Sbjct: 243 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN------PLAVDLLEKMLVL 296
Query: 309 DHQDRLTAREAMAHPYFAQ 327
D R+TA +A+AH YFAQ
Sbjct: 297 DSDKRITAAQALAHAYFAQ 315
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 143/311 (45%), Gaps = 31/311 (9%)
Query: 32 VIFSDQDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXX----XLQ 87
I+ + Y+ + VG G Y V + T R L
Sbjct: 12 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 71
Query: 88 NLCGGPNVVKLLDIVRDQHSKTPSLIFEYVN---------STDFK--VLYPTLTDYDIRY 136
NV+ LLD+ TP+ E N D V LTD +++
Sbjct: 72 KHMKHENVIGLLDVF------TPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 125
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 196
IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++D+GLA H E VA+R
Sbjct: 126 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLAR--HTDDEMTGYVATR 182
Query: 197 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELN 256
+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 183 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGTPGAE 241
Query: 257 AYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTA 316
+ +L + FI A+ P A+D L+K+L D R+TA
Sbjct: 242 LLKKISSESARNYIQSLAQMPKMNFANVFIGAN------PLAVDLLEKMLVLDSDKRITA 295
Query: 317 REAMAHPYFAQ 327
+A+AH YFAQ
Sbjct: 296 AQALAHAYFAQ 306
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 114/199 (57%), Gaps = 10/199 (5%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 188
LTD +++ IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++D+GLA H E
Sbjct: 124 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLAR--HTDDE 180
Query: 189 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
VA+R+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +
Sbjct: 181 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILR 239
Query: 249 VLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRY 308
++GT + +L + FI A+ P A+D L+K+L
Sbjct: 240 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN------PLAVDLLEKMLVL 293
Query: 309 DHQDRLTAREAMAHPYFAQ 327
D R+TA +A+AH YFAQ
Sbjct: 294 DSDKRITAAQALAHAYFAQ 312
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 114/199 (57%), Gaps = 10/199 (5%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 188
LTD +++ IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++D+GLA H E
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLAR--HTDDE 178
Query: 189 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
VA+R+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +
Sbjct: 179 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILR 237
Query: 249 VLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRY 308
++GT + +L + FI A+ P A+D L+K+L
Sbjct: 238 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN------PLAVDLLEKMLVL 291
Query: 309 DHQDRLTAREAMAHPYFAQ 327
D R+TA +A+AH YFAQ
Sbjct: 292 DSDKRITAAQALAHAYFAQ 310
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 114/199 (57%), Gaps = 10/199 (5%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 188
LTD +++ IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++D+GLA H E
Sbjct: 133 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLAR--HTDDE 189
Query: 189 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
VA+R+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +
Sbjct: 190 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILR 248
Query: 249 VLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRY 308
++GT + +L + FI A+ P A+D L+K+L
Sbjct: 249 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN------PLAVDLLEKMLVL 302
Query: 309 DHQDRLTAREAMAHPYFAQ 327
D R+TA +A+AH YFAQ
Sbjct: 303 DSDKRITAAQALAHAYFAQ 321
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 114/199 (57%), Gaps = 10/199 (5%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 188
LTD +++ IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++D+GLA H E
Sbjct: 142 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLAR--HTDDE 198
Query: 189 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
VA+R+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +
Sbjct: 199 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILR 257
Query: 249 VLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRY 308
++GT + +L + FI A+ P A+D L+K+L
Sbjct: 258 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN------PLAVDLLEKMLVL 311
Query: 309 DHQDRLTAREAMAHPYFAQ 327
D R+TA +A+AH YFAQ
Sbjct: 312 DSDKRITAAQALAHAYFAQ 330
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 114/199 (57%), Gaps = 10/199 (5%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 188
LTD +++ IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++D+GLA H E
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLAR--HTDDE 178
Query: 189 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
VA+R+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +
Sbjct: 179 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILR 237
Query: 249 VLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRY 308
++GT + +L + FI A+ P A+D L+K+L
Sbjct: 238 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN------PLAVDLLEKMLVL 291
Query: 309 DHQDRLTAREAMAHPYFAQ 327
D R+TA +A+AH YFAQ
Sbjct: 292 DSDKRITAAQALAHAYFAQ 310
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 143/311 (45%), Gaps = 31/311 (9%)
Query: 32 VIFSDQDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXX----XLQ 87
I+ + Y+ + VG G Y V + T R L
Sbjct: 35 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 94
Query: 88 NLCGGPNVVKLLDIVRDQHSKTPSLIFEYVN---------STDFK--VLYPTLTDYDIRY 136
NV+ LLD+ TP+ E N D V LTD +++
Sbjct: 95 KHMKHENVIGLLDVF------TPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 148
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 196
IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++D+GLA H E VA+R
Sbjct: 149 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLAR--HTDDEMTGYVATR 205
Query: 197 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELN 256
+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 206 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGTPGAE 264
Query: 257 AYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTA 316
+ +L + FI A+ P A+D L+K+L D R+TA
Sbjct: 265 LLKKISSESARNYIQSLAQMPKMNFANVFIGAN------PLAVDLLEKMLVLDSDKRITA 318
Query: 317 REAMAHPYFAQ 327
+A+AH YFAQ
Sbjct: 319 AQALAHAYFAQ 329
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 114/199 (57%), Gaps = 10/199 (5%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 188
LTD +++ IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++D+GLA H E
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLAR--HTDDE 178
Query: 189 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
VA+R+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +
Sbjct: 179 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILR 237
Query: 249 VLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRY 308
++GT + +L + FI A+ P A+D L+K+L
Sbjct: 238 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN------PLAVDLLEKMLVL 291
Query: 309 DHQDRLTAREAMAHPYFAQ 327
D R+TA +A+AH YFAQ
Sbjct: 292 DSDKRITAAQALAHAYFAQ 310
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 114/199 (57%), Gaps = 10/199 (5%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 188
LTD +++ IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++D+GLA H E
Sbjct: 145 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLAR--HTDDE 201
Query: 189 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
VA+R+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +
Sbjct: 202 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILR 260
Query: 249 VLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRY 308
++GT + +L + FI A+ P A+D L+K+L
Sbjct: 261 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN------PLAVDLLEKMLVL 314
Query: 309 DHQDRLTAREAMAHPYFAQ 327
D R+TA +A+AH YFAQ
Sbjct: 315 DSDKRITAAQALAHAYFAQ 333
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 143/311 (45%), Gaps = 31/311 (9%)
Query: 32 VIFSDQDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXX----XLQ 87
I+ + Y+ + VG G Y V + T R L
Sbjct: 36 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 95
Query: 88 NLCGGPNVVKLLDIVRDQHSKTPSLIFEYVN---------STDFK--VLYPTLTDYDIRY 136
NV+ LLD+ TP+ E N D V LTD +++
Sbjct: 96 KHMKHENVIGLLDVF------TPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 149
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 196
IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++D+GLA H E VA+R
Sbjct: 150 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLAR--HTDDEMTGYVATR 206
Query: 197 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELN 256
+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 207 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGTPGAE 265
Query: 257 AYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTA 316
+ +L + FI A+ P A+D L+K+L D R+TA
Sbjct: 266 LLKKISSESARNYIQSLAQMPKMNFANVFIGAN------PLAVDLLEKMLVLDSDKRITA 319
Query: 317 REAMAHPYFAQ 327
+A+AH YFAQ
Sbjct: 320 AQALAHAYFAQ 330
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 132/253 (52%), Gaps = 49/253 (19%)
Query: 94 NVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTD-------YDIRYYIYELLKALD 146
N+V L DI+ + S T L+FEY++ K L L D ++++ ++++LL+ L
Sbjct: 61 NIVTLHDIIHTEKSLT--LVFEYLD----KDLKQYLDDCGNIINMHNVKLFLFQLLRGLA 114
Query: 147 YCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH-PGKEYNVRVASRYFKGPELLV 205
YCH Q ++HRD+KP N++I+ E +L+L D+GLA P K Y+ V + +++ P++L+
Sbjct: 115 YCHRQKVLHRDLKPQNLLIN-ERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILL 173
Query: 206 DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT------------D 253
DY +DMW +GC+F M + P F G +QL I ++LGT +
Sbjct: 174 GSTDYSTQIDMWGVGCIFYEMATGR-PLFPGSTVEEQLHFIFRILGTPTEETWPGILSNE 232
Query: 254 ELNAY-LNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQD 312
E Y KY E AL+ R + + D L KLL+++ ++
Sbjct: 233 EFKTYNYPKYRAE------ALLSHAPR--------------LDSDGADLLTKLLQFEGRN 272
Query: 313 RLTAREAMAHPYF 325
R++A +AM HP+F
Sbjct: 273 RISAEDAMKHPFF 285
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 143/311 (45%), Gaps = 31/311 (9%)
Query: 32 VIFSDQDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXX----XLQ 87
I+ + Y+ + VG G Y V + T R L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 88 NLCGGPNVVKLLDIVRDQHSKTPSLIFEYVN---------STDFK--VLYPTLTDYDIRY 136
NV+ LLD+ TP+ E N D V LTD +++
Sbjct: 76 KHMKHENVIGLLDVF------TPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 196
IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++D+GLA H E VA+R
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLAR--HTDDEMTGYVATR 186
Query: 197 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELN 256
+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGTPGAE 245
Query: 257 AYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTA 316
+ +L + FI A+ P A+D L+K+L D R+TA
Sbjct: 246 LLKKISSESARNYIQSLAQMPKMNFANVFIGAN------PLAVDLLEKMLVLDSDKRITA 299
Query: 317 REAMAHPYFAQ 327
+A+AH YFAQ
Sbjct: 300 AQALAHAYFAQ 310
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 114/199 (57%), Gaps = 10/199 (5%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 188
LTD +++ IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++D+GLA H E
Sbjct: 128 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLAR--HTDDE 184
Query: 189 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
VA+R+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +
Sbjct: 185 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILR 243
Query: 249 VLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRY 308
++GT + +L + FI A+ P A+D L+K+L
Sbjct: 244 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN------PLAVDLLEKMLVL 297
Query: 309 DHQDRLTAREAMAHPYFAQ 327
D R+TA +A+AH YFAQ
Sbjct: 298 DSDKRITAAQALAHAYFAQ 316
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 143/311 (45%), Gaps = 31/311 (9%)
Query: 32 VIFSDQDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXX----XLQ 87
I+ + Y+ + VG G Y V + T R L
Sbjct: 22 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 81
Query: 88 NLCGGPNVVKLLDIVRDQHSKTPSLIFEYVN---------STDFK--VLYPTLTDYDIRY 136
NV+ LLD+ TP+ E N D V LTD +++
Sbjct: 82 KHMKHENVIGLLDVF------TPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 135
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 196
IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++D+GLA H E VA+R
Sbjct: 136 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLAR--HTDDEMTGYVATR 192
Query: 197 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELN 256
+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 193 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGTPGAE 251
Query: 257 AYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTA 316
+ +L + FI A+ P A+D L+K+L D R+TA
Sbjct: 252 LLKKISSESARNYIQSLAQMPKMNFANVFIGAN------PLAVDLLEKMLVLDSDKRITA 305
Query: 317 REAMAHPYFAQ 327
+A+AH YFAQ
Sbjct: 306 AQALAHAYFAQ 316
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 114/199 (57%), Gaps = 10/199 (5%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 188
LTD +++ IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++D+GLA H E
Sbjct: 145 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLAR--HTDDE 201
Query: 189 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
VA+R+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +
Sbjct: 202 MXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILR 260
Query: 249 VLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRY 308
++GT + +L + FI A+ P A+D L+K+L
Sbjct: 261 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN------PLAVDLLEKMLVL 314
Query: 309 DHQDRLTAREAMAHPYFAQ 327
D R+TA +A+AH YFAQ
Sbjct: 315 DSDKRITAAQALAHAYFAQ 333
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 114/199 (57%), Gaps = 10/199 (5%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 188
LTD +++ IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++D+GLA H E
Sbjct: 132 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLAR--HTDDE 188
Query: 189 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
VA+R+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +
Sbjct: 189 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILR 247
Query: 249 VLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRY 308
++GT + +L + FI A+ P A+D L+K+L
Sbjct: 248 LVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGAN------PLAVDLLEKMLVL 301
Query: 309 DHQDRLTAREAMAHPYFAQ 327
D R+TA +A+AH YFAQ
Sbjct: 302 DSDKRITAAQALAHAYFAQ 320
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 143/311 (45%), Gaps = 31/311 (9%)
Query: 32 VIFSDQDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXX----XLQ 87
I+ + Y+ + VG G Y V + T R L
Sbjct: 12 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 71
Query: 88 NLCGGPNVVKLLDIVRDQHSKTPSLIFEYVN---------STDFK--VLYPTLTDYDIRY 136
NV+ LLD+ TP+ E N D V LTD +++
Sbjct: 72 KHMKHENVIGLLDVF------TPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 125
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 196
IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++D+GLA H E VA+R
Sbjct: 126 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLAR--HTDDEMAGFVATR 182
Query: 197 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELN 256
+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 183 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGTPGAE 241
Query: 257 AYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTA 316
+ +L + FI A+ P A+D L+K+L D R+TA
Sbjct: 242 LLKKISSESARNYIQSLAQMPKMNFANVFIGAN------PLAVDLLEKMLVLDSDKRITA 295
Query: 317 REAMAHPYFAQ 327
+A+AH YFAQ
Sbjct: 296 AQALAHAYFAQ 306
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 114/199 (57%), Gaps = 10/199 (5%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 188
LTD +++ IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++D+GLA H E
Sbjct: 128 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLAR--HTDDE 184
Query: 189 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
VA+R+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +
Sbjct: 185 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILR 243
Query: 249 VLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRY 308
++GT + +L + FI A+ P A+D L+K+L
Sbjct: 244 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN------PLAVDLLEKMLVL 297
Query: 309 DHQDRLTAREAMAHPYFAQ 327
D R+TA +A+AH YFAQ
Sbjct: 298 DSDKRITAAQALAHAYFAQ 316
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 113/199 (56%), Gaps = 10/199 (5%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 188
LTD +++ IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++D GLA H E
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDGGLAR--HTDDE 178
Query: 189 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
VA+R+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +
Sbjct: 179 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILR 237
Query: 249 VLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRY 308
++GT + +L + FI A+ P A+D L+K+L
Sbjct: 238 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN------PLAVDLLEKMLVL 291
Query: 309 DHQDRLTAREAMAHPYFAQ 327
D R+TA +A+AH YFAQ
Sbjct: 292 DSDKRITAAQALAHAYFAQ 310
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 114 bits (285), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 143/311 (45%), Gaps = 31/311 (9%)
Query: 32 VIFSDQDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXX----XLQ 87
I+ + Y+ + VG G Y V + T R L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 88 NLCGGPNVVKLLDIVRDQHSKTPSLIFEYVN---------STDFK--VLYPTLTDYDIRY 136
NV+ LLD+ TP+ E N D V LTD +++
Sbjct: 76 KHMKHENVIGLLDVF------TPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 196
IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++D+GLA H E VA+R
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLAR--HTDDEMAGFVATR 186
Query: 197 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELN 256
+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGTPGAE 245
Query: 257 AYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTA 316
+ +L + FI A+ P A+D L+K+L D R+TA
Sbjct: 246 LLKKISSESARNYIQSLTQMPKMNFANVFIGAN------PLAVDLLEKMLVLDSDKRITA 299
Query: 317 REAMAHPYFAQ 327
+A+AH YFAQ
Sbjct: 300 AQALAHAYFAQ 310
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 143/311 (45%), Gaps = 31/311 (9%)
Query: 32 VIFSDQDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXX----XLQ 87
I+ + Y+ + VG G Y V + T R L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 88 NLCGGPNVVKLLDIVRDQHSKTPSLIFEYVN---------STDFK--VLYPTLTDYDIRY 136
NV+ LLD+ TP+ E N D V LTD +++
Sbjct: 76 KHMKHENVIGLLDVF------TPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 196
IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++D+GLA H E VA+R
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLAR--HTDDEMAGFVATR 186
Query: 197 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELN 256
+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGTPGAE 245
Query: 257 AYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTA 316
+ +L + FI A+ P A+D L+K+L D R+TA
Sbjct: 246 LLKKISSESARNYIQSLAQMPKMNFANVFIGAN------PLAVDLLEKMLVLDSDKRITA 299
Query: 317 REAMAHPYFAQ 327
+A+AH YFAQ
Sbjct: 300 AQALAHAYFAQ 310
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 113/199 (56%), Gaps = 10/199 (5%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 188
LTD +++ IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++D GLA H E
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDAGLAR--HTDDE 178
Query: 189 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
VA+R+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +
Sbjct: 179 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILR 237
Query: 249 VLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRY 308
++GT + +L + FI A+ P A+D L+K+L
Sbjct: 238 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN------PLAVDLLEKMLVL 291
Query: 309 DHQDRLTAREAMAHPYFAQ 327
D R+TA +A+AH YFAQ
Sbjct: 292 DSDKRITAAQALAHAYFAQ 310
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 113/199 (56%), Gaps = 10/199 (5%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 188
LTD +++ IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++D GLA H E
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDRGLAR--HTDDE 178
Query: 189 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
VA+R+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +
Sbjct: 179 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILR 237
Query: 249 VLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRY 308
++GT + +L + FI A+ P A+D L+K+L
Sbjct: 238 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN------PLAVDLLEKMLVL 291
Query: 309 DHQDRLTAREAMAHPYFAQ 327
D R+TA +A+AH YFAQ
Sbjct: 292 DSDKRITAAQALAHAYFAQ 310
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 113/199 (56%), Gaps = 10/199 (5%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 188
LTD +++ IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++D+GL H E
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED-SELKILDFGLCR--HTDDE 178
Query: 189 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
VA+R+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +
Sbjct: 179 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILR 237
Query: 249 VLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRY 308
++GT + +L + FI A+ P A+D L+K+L
Sbjct: 238 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN------PLAVDLLEKMLVL 291
Query: 309 DHQDRLTAREAMAHPYFAQ 327
D R+TA +A+AH YFAQ
Sbjct: 292 DSDKRITAAQALAHAYFAQ 310
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 145/302 (48%), Gaps = 32/302 (10%)
Query: 40 YEVVRKVGRGKYSEVFEGINVNTNE-------RCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
YE + +G G+++ V++ + NTN+ + L
Sbjct: 12 YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH 71
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYP----TLTDYDIRYYIYELLKALDYC 148
PN++ LLD H SL+F+++ TD +V+ LT I+ Y+ L+ L+Y
Sbjct: 72 PNIIGLLDAF--GHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYL 128
Query: 149 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDL 207
H I+HRD+KP+N+++D E L+L D+GLA+ F P + Y +V +R+++ PELL
Sbjct: 129 HQHWILHRDLKPNNLLLD-ENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGA 187
Query: 208 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELD 267
+ Y +DMW++GC+ A ++ R PF G + DQL +I + LGT +
Sbjct: 188 RMYGVGVDMWAVGCILAELLLRV-PFLPGDSDLDQLTRIFETLGTPTEEQW--------- 237
Query: 268 PQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLD---KLLRYDHQDRLTAREAMAHPY 324
P + +L + K F H+ S D LD L ++ R+TA +A+ Y
Sbjct: 238 PDMCSLPDYVTFK---SFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKY 294
Query: 325 FA 326
F+
Sbjct: 295 FS 296
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 113/199 (56%), Gaps = 10/199 (5%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 188
LTD +++ IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++ +GLA H E
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILGFGLAR--HTDDE 178
Query: 189 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
VA+R+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +
Sbjct: 179 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILR 237
Query: 249 VLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRY 308
++GT + +L + FI A+ P A+D L+K+L
Sbjct: 238 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN------PLAVDLLEKMLVL 291
Query: 309 DHQDRLTAREAMAHPYFAQ 327
D R+TA +A+AH YFAQ
Sbjct: 292 DSDKRITAAQALAHAYFAQ 310
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 157/330 (47%), Gaps = 32/330 (9%)
Query: 18 VYSYCLCFWNVSSY-VIFSDQDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXX-- 74
V + L S+ V F D+YE++ +G G Y V T ++
Sbjct: 33 VAAKNLALLKARSFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFD 92
Query: 75 --XXXXXXXXXXXLQNLCGGPNVVKLLDIVRDQ----HSKTPSLIFEYVNSTDFKVLYPT 128
+ N++ + DI+R K+ ++ + + S ++++ +
Sbjct: 93 VVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSS 152
Query: 129 --LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA------ 180
LT +RY++Y+LL+ L Y HS ++HRD+KP N++++ +L++ D+G+A
Sbjct: 153 QPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENC-ELKIGDFGMARGLCTS 211
Query: 181 --EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHD 238
E + EY VA+R+++ PEL++ L +Y ++D+WS+GC+F M+ R++ F G +
Sbjct: 212 PAEHQYFMTEY---VATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ-LFPGKN 267
Query: 239 NHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPW-SKFINADNQHLVSPE 297
QL I VLGT + + +L R PW + + AD Q
Sbjct: 268 YVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQP-VPWETVYPGADRQ------ 320
Query: 298 AIDFLDKLLRYDHQDRLTAREAMAHPYFAQ 327
A+ L ++LR++ R++A A+ HP+ A+
Sbjct: 321 ALSLLGRMLRFEPSARISAAAALRHPFLAK 350
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 151/315 (47%), Gaps = 31/315 (9%)
Query: 32 VIFSDQDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXX----XXXXXXXXXXXLQ 87
V F D+YE++ +G G Y V T ++ +
Sbjct: 49 VTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKIL 108
Query: 88 NLCGGPNVVKLLDIVRDQ----HSKTPSLIFEYVNSTDFKVLYPT--LTDYDIRYYIYEL 141
N++ + DI+R K+ ++ + + S ++++ + LT +RY++Y+L
Sbjct: 109 KHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQL 168
Query: 142 LKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA--------EFYHPGKEYNVRV 193
L+ L Y HS ++HRD+KP N++++ +L++ D+G+A E + EY V
Sbjct: 169 LRGLKYMHSAQVIHRDLKPSNLLVNENC-ELKIGDFGMARGLCTSPAEHQYFMTEY---V 224
Query: 194 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 253
A+R+++ PEL++ L +Y ++D+WS+GC+F M+ R++ F G + QL I VLGT
Sbjct: 225 ATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ-LFPGKNYVHQLQLIMMVLGTP 283
Query: 254 ELNAYLNKYHLELDPQLDALVGRHSRKPWSK-FINADNQHLVSPEAIDFLDKLLRYDHQD 312
+ + +L R PW + AD Q A+ L ++LR++
Sbjct: 284 SPAVIQAVGAERVRAYIQSLPPRQP-VPWETVYPGADRQ------ALSLLGRMLRFEPSA 336
Query: 313 RLTAREAMAHPYFAQ 327
R++A A+ HP+ A+
Sbjct: 337 RISAAAALRHPFLAK 351
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 149/312 (47%), Gaps = 23/312 (7%)
Query: 27 NVSSYVIFSDQDDYEVVRKVGRGKYSEVFEGINVNTNE-----RCXXXXXXXXXXXXXXX 81
+VS+ + D Y + K+G G Y EV++ I+ TNE R
Sbjct: 23 SVSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIR 82
Query: 82 XXXXLQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL--YPTLTDYDIRYYIY 139
L+ L N+++L ++ H LIFEY + K + P ++ I+ ++Y
Sbjct: 83 EVSLLKELQHR-NIIELKSVIHHNHRL--HLIFEYAENDLKKYMDKNPDVSMRVIKSFLY 139
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMID----HELRKLRLIDWGLAE-FYHPGKEYNVRVA 194
+L+ +++CHS+ +HRD+KP N+++ E L++ D+GLA F P +++ +
Sbjct: 140 QLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEII 199
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDE 254
+ +++ PE+L+ + Y S+D+WS+ C++A M+ K P F G DQL KI +VLG +
Sbjct: 200 TLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLM-KTPLFPGDSEIDQLFKIFEVLGLPD 258
Query: 255 LNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRL 314
+ L P + K + + A D L +L D R+
Sbjct: 259 DTTWPGVTAL---PDWKQSFPKFRGKTLKRVLGALLDDEGL----DLLTAMLEMDPVKRI 311
Query: 315 TAREAMAHPYFA 326
+A+ A+ HPYF+
Sbjct: 312 SAKNALEHPYFS 323
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 142/311 (45%), Gaps = 31/311 (9%)
Query: 32 VIFSDQDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXX----XLQ 87
I+ + Y+ + VG G Y V + T R L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 88 NLCGGPNVVKLLDIVRDQHSKTPSLIFEYVN---------STDFK--VLYPTLTDYDIRY 136
NV+ LLD+ TP+ E N D V LTD +++
Sbjct: 76 KHMKHENVIGLLDVF------TPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 196
IY++L+ L Y HS I+HRD+KP N+ ++ + +L+++D+ LA H E VA+R
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFYLAR--HTDDEMTGYVATR 186
Query: 197 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELN 256
+++ PE++++ Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGTPGAE 245
Query: 257 AYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTA 316
+ +L + FI A+ P A+D L+K+L D R+TA
Sbjct: 246 LLKKISSESARNYIQSLTQMPKMNFANVFIGAN------PLAVDLLEKMLVLDSDKRITA 299
Query: 317 REAMAHPYFAQ 327
+A+AH YFAQ
Sbjct: 300 AQALAHAYFAQ 310
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 143/313 (45%), Gaps = 38/313 (12%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTNE-----RCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
+ YE + K+G G Y VF+ N +T + + L+ L
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQL-KH 61
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL---YPTLTDYDIRYYIYELLKALDYCH 149
PN+V LL++ R + L+FEY + T L + ++ ++ ++ L+A+++CH
Sbjct: 62 PNLVNLLEVFR--RKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCH 119
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH-PGKEYNVRVASRYFKGPELLVDLQ 208
+HRDVKP N++I ++L D+G A P Y+ VA+R+++ PELLV
Sbjct: 120 KHNCIHRDVKPENILITKH-SVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDT 178
Query: 209 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG--------TDELNAYLN 260
Y +D+W++GC+FA ++ P + G + DQL I K LG N Y +
Sbjct: 179 QYGPPVDVWAIGCVFAELL-SGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFS 237
Query: 261 KYHLELDPQLDALVGRHSRKPWS-KFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREA 319
+ DP+ +P KF N +S A+ L L D +RLT +
Sbjct: 238 GVKIP-DPE--------DMEPLELKFPN------ISYPALGLLKGCLHMDPTERLTCEQL 282
Query: 320 MAHPYFAQVRAAE 332
+ HPYF +R E
Sbjct: 283 LHHPYFENIREIE 295
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 112/226 (49%), Gaps = 20/226 (8%)
Query: 113 IFEYVNSTDFKVLYPT--LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELR 170
I + + TD + T L+D I+Y+IY+ L+A+ H ++HRD+KP N++I+
Sbjct: 91 IIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNC- 149
Query: 171 KLRLIDWGLAEFYHPGKEYNVR-----------VASRYFKGPELLVDLQDYDYSLDMWSL 219
L++ D+GLA N VA+R+++ PE+++ Y ++D+WS
Sbjct: 150 DLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSC 209
Query: 220 GCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSR 279
GC+ A + R+ P F G D QL+ I ++GT + L + + +
Sbjct: 210 GCILAELFLRR-PIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPA 268
Query: 280 KPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 325
P K V+P+ ID L ++L +D R+TA+EA+ HPY
Sbjct: 269 APLEKMFPR-----VNPKGIDLLQRMLVFDPAKRITAKEALEHPYL 309
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 112/226 (49%), Gaps = 20/226 (8%)
Query: 113 IFEYVNSTDFKVLYPT--LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELR 170
I + + TD + T L+D I+Y+IY+ L+A+ H ++HRD+KP N++I+
Sbjct: 91 IIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNC- 149
Query: 171 KLRLIDWGLAEFYHPGKEYNVR-----------VASRYFKGPELLVDLQDYDYSLDMWSL 219
L++ D+GLA N VA+R+++ PE+++ Y ++D+WS
Sbjct: 150 DLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSC 209
Query: 220 GCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSR 279
GC+ A + R+ P F G D QL+ I ++GT + L + + +
Sbjct: 210 GCILAELFLRR-PIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPA 268
Query: 280 KPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 325
P K V+P+ ID L ++L +D R+TA+EA+ HPY
Sbjct: 269 APLEKMFPR-----VNPKGIDLLQRMLVFDPAKRITAKEALEHPYL 309
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 112/226 (49%), Gaps = 20/226 (8%)
Query: 113 IFEYVNSTDFKVLYPT--LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELR 170
I + + TD + T L+D I+Y+IY+ L+A+ H ++HRD+KP N++I+
Sbjct: 91 IIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNC- 149
Query: 171 KLRLIDWGLAEFYHPGKEYNVR-----------VASRYFKGPELLVDLQDYDYSLDMWSL 219
L++ D+GLA N VA+R+++ PE+++ Y ++D+WS
Sbjct: 150 DLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSC 209
Query: 220 GCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSR 279
GC+ A + R+ P F G D QL+ I ++GT + L + + +
Sbjct: 210 GCILAELFLRR-PIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPA 268
Query: 280 KPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 325
P K V+P+ ID L ++L +D R+TA+EA+ HPY
Sbjct: 269 APLEKMFPR-----VNPKGIDLLQRMLVFDPAKRITAKEALEHPYL 309
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 122/248 (49%), Gaps = 24/248 (9%)
Query: 94 NVVKLLDIVRDQHSKTPSLIFEYVNST--DFKVLYPTLTDYDI-RYYIYELLKALDYCHS 150
N+V LL++ + + K L+FE+V+ T D L+P DY + + Y+++++ + +CHS
Sbjct: 85 NLVNLLEVCKKK--KRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHS 142
Query: 151 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQD 209
I+HRD+KP N+++ ++L D+G A PG+ Y+ VA+R+++ PELLV
Sbjct: 143 HNIIHRDIKPENILVSQS-GVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVK 201
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
Y ++D+W++GC+ M F EP F G + DQL I LG L H EL +
Sbjct: 202 YGKAVDVWAIGCLVTEM-FMGEPLFPGDSDIDQLYHIMMCLGN------LIPRHQELFNK 254
Query: 270 LDALVGRH-----SRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPY 324
G R+P + +S ID K L D R E + H +
Sbjct: 255 NPVFAGVRLPEIKEREPLERRYPK-----LSEVVIDLAKKCLHIDPDKRPFCAELLHHDF 309
Query: 325 FAQVRAAE 332
F AE
Sbjct: 310 FQMDGFAE 317
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 124/228 (54%), Gaps = 29/228 (12%)
Query: 112 LIFEYVNSTDFKVLY--PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEL 169
++ EY+ + VL P L ++ R ++Y+LL+ L Y HS ++HRD+KP N+ I+ E
Sbjct: 99 IVQEYMETDLANVLEQGPLLEEH-ARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTED 157
Query: 170 RKLRLIDWGLAEFYHPGKEYNVRVA----SRYFKGPELLVDLQDYDYSLDMWSLGCMFAG 225
L++ D+GLA P + ++ +++++ P LL+ +Y ++DMW+ GC+FA
Sbjct: 158 LVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAE 217
Query: 226 MIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSR------ 279
M+ K F H +L ++ +L + + H E +L +++ + R
Sbjct: 218 MLTGKTLFAGAH----ELEQMQLILES------IPVVHEEDRQELLSVIPVYIRNDMTEP 267
Query: 280 -KPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFA 326
KP ++ + +S EA+DFL+++L + DRLTA EA++HPY +
Sbjct: 268 HKPLTQLLPG-----ISREAVDFLEQILTFSPMDRLTAEEALSHPYMS 310
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 144/311 (46%), Gaps = 26/311 (8%)
Query: 34 FSDQ-DDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXX----XXXXXXXLQN 88
F D+ YE + K+G+G + EVF+ + T ++ +
Sbjct: 13 FCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQ 72
Query: 89 LCGGPNVVKLLDIVRDQHSK------TPSLIFEYVNSTDFKVLYPTLTDY---DIRYYIY 139
L NVV L++I R + S + L+F++ +L L + +I+ +
Sbjct: 73 LLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQ 132
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK-----EYNVRVA 194
LL L Y H I+HRD+K NV+I + L+L D+GLA + K Y RV
Sbjct: 133 MLLNGLYYIHRNKILHRDMKAANVLITRD-GVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDE 254
+ +++ PELL+ +DY +D+W GC+ A M + + P G+ QL I+++ G+
Sbjct: 192 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEM-WTRSPIMQGNTEQHQLALISQLCGSIT 250
Query: 255 LNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRL 314
+ N + EL +L+ LV RK + ++ P A+D +DKLL D R+
Sbjct: 251 PEVWPNVDNYELYEKLE-LVKGQKRKVKDRL----KAYVRDPYALDLIDKLLVLDPAQRI 305
Query: 315 TAREAMAHPYF 325
+ +A+ H +F
Sbjct: 306 DSDDALNHDFF 316
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 144/311 (46%), Gaps = 26/311 (8%)
Query: 34 FSDQ-DDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXX----XXXXXXXLQN 88
F D+ YE + K+G+G + EVF+ + T ++ +
Sbjct: 13 FCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQ 72
Query: 89 LCGGPNVVKLLDIVRDQHS------KTPSLIFEYVNSTDFKVLYPTLTDY---DIRYYIY 139
L NVV L++I R + S + L+F++ +L L + +I+ +
Sbjct: 73 LLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQ 132
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK-----EYNVRVA 194
LL L Y H I+HRD+K NV+I + L+L D+GLA + K Y RV
Sbjct: 133 MLLNGLYYIHRNKILHRDMKAANVLITRD-GVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDE 254
+ +++ PELL+ +DY +D+W GC+ A M + + P G+ QL I+++ G+
Sbjct: 192 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEM-WTRSPIMQGNTEQHQLALISQLCGSIT 250
Query: 255 LNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRL 314
+ N + EL +L+ LV RK + ++ P A+D +DKLL D R+
Sbjct: 251 PEVWPNVDNYELYEKLE-LVKGQKRKVKDRL----KAYVRDPYALDLIDKLLVLDPAQRI 305
Query: 315 TAREAMAHPYF 325
+ +A+ H +F
Sbjct: 306 DSDDALNHDFF 316
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 144/311 (46%), Gaps = 26/311 (8%)
Query: 34 FSDQ-DDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXX----XXXXXXXLQN 88
F D+ YE + K+G+G + EVF+ + T ++ +
Sbjct: 12 FCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQ 71
Query: 89 LCGGPNVVKLLDIVRDQHSK------TPSLIFEYVNSTDFKVLYPTLTDY---DIRYYIY 139
L NVV L++I R + S + L+F++ +L L + +I+ +
Sbjct: 72 LLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQ 131
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK-----EYNVRVA 194
LL L Y H I+HRD+K NV+I + L+L D+GLA + K Y RV
Sbjct: 132 MLLNGLYYIHRNKILHRDMKAANVLITRD-GVLKLADFGLARAFSLAKNSQPNRYXNRVV 190
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDE 254
+ +++ PELL+ +DY +D+W GC+ A M + + P G+ QL I+++ G+
Sbjct: 191 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEM-WTRSPIMQGNTEQHQLALISQLCGSIT 249
Query: 255 LNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRL 314
+ N + EL +L+ + G+ K + ++ P A+D +DKLL D R+
Sbjct: 250 PEVWPNVDNYELYEKLELVKGQK-----RKVKDRLKAYVRDPYALDLIDKLLVLDPAQRI 304
Query: 315 TAREAMAHPYF 325
+ +A+ H +F
Sbjct: 305 DSDDALNHDFF 315
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 144/311 (46%), Gaps = 26/311 (8%)
Query: 34 FSDQ-DDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXX----XXXXXXXLQN 88
F D+ YE + K+G+G + EVF+ + T ++ +
Sbjct: 13 FCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQ 72
Query: 89 LCGGPNVVKLLDIVRDQHSK------TPSLIFEYVNSTDFKVLYPTLTDY---DIRYYIY 139
L NVV L++I R + S + L+F++ +L L + +I+ +
Sbjct: 73 LLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQ 132
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK-----EYNVRVA 194
LL L Y H I+HRD+K NV+I + L+L D+GLA + K Y RV
Sbjct: 133 MLLNGLYYIHRNKILHRDMKAANVLITRD-GVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDE 254
+ +++ PELL+ +DY +D+W GC+ A M + + P G+ QL I+++ G+
Sbjct: 192 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEM-WTRSPIMQGNTEQHQLALISQLCGSIT 250
Query: 255 LNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRL 314
+ N + EL +L+ + G+ K + ++ P A+D +DKLL D R+
Sbjct: 251 PEVWPNVDNYELYEKLELVKGQK-----RKVKDRLKAYVRDPYALDLIDKLLVLDPAQRI 305
Query: 315 TAREAMAHPYF 325
+ +A+ H +F
Sbjct: 306 DSDDALNHDFF 316
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 125/246 (50%), Gaps = 22/246 (8%)
Query: 94 NVVKLLDIVRDQHS----KTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCH 149
N++ LL++ Q S + ++ E +++ +V+ L + Y +Y++L + + H
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+++ +
Sbjct: 144 SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPEVVTRYYRAPEVILGM-G 201
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
Y ++D+WS+GC+ MI + F G D+ DQ K+ + LGT ++ +L P
Sbjct: 202 YKENVDIWSVGCIMGEMI-KGGVLFPGTDHIDQWNKVIEQLGTP-----CPEFMKKLQPT 255
Query: 270 LDALVGRHSRKPWSKF--------INADNQH--LVSPEAIDFLDKLLRYDHQDRLTAREA 319
+ V + F AD++H L + +A D L K+L D R++ EA
Sbjct: 256 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVIDASKRISVDEA 315
Query: 320 MAHPYF 325
+ HPY
Sbjct: 316 LQHPYI 321
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 125/246 (50%), Gaps = 22/246 (8%)
Query: 94 NVVKLLDIVRDQHS----KTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCH 149
N++ LL++ Q S + ++ E +++ +V+ L + Y +Y++L + + H
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+++ +
Sbjct: 144 SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGM-G 201
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
Y ++D+WS+GC+ M+ K F G D DQ K+ + LGT A++ K L P
Sbjct: 202 YKENVDIWSVGCIMGEMVCHK-ILFPGRDYIDQWNKVIEQLGT-PCPAFMKK----LQPT 255
Query: 270 LDALVGRHSRKPWSKF--------INADNQH--LVSPEAIDFLDKLLRYDHQDRLTAREA 319
+ V + F AD++H L + +A D L K+L D R++ EA
Sbjct: 256 VRNYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 315
Query: 320 MAHPYF 325
+ HPY
Sbjct: 316 LQHPYI 321
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 124/246 (50%), Gaps = 22/246 (8%)
Query: 94 NVVKLLDIVRDQHS----KTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCH 149
N++ LL++ Q S + ++ E +++ +V+ L + Y +Y++L + + H
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+++ +
Sbjct: 144 SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGM-G 201
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
Y ++D+WS+GC+ M+ K F G D DQ K+ + LGT ++ +L P
Sbjct: 202 YKENVDLWSVGCIMGEMVCHK-ILFPGRDYIDQWNKVIEQLGTP-----CPEFMKKLQPT 255
Query: 270 LDALVGRHSRKPWSKF--------INADNQH--LVSPEAIDFLDKLLRYDHQDRLTAREA 319
+ V + F AD++H L + +A D L K+L D R++ EA
Sbjct: 256 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 315
Query: 320 MAHPYF 325
+ HPY
Sbjct: 316 LQHPYI 321
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 124/242 (51%), Gaps = 12/242 (4%)
Query: 94 NVVKLLDIVRDQHS----KTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCH 149
N++ LL++ Q + + L+ E +++ +V++ L + Y +Y++L + + H
Sbjct: 82 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLH 141
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+++ +
Sbjct: 142 SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTASTNFMMTPYVVTRYYRAPEVILGM-G 199
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD--ELNAYLN---KYHL 264
Y ++D+WS+GC+ G + + F G D+ DQ K+ + LGT E A L + ++
Sbjct: 200 YKENVDIWSVGCIM-GELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYV 258
Query: 265 ELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPY 324
E P + W ++ + + +A D L K+L D R++ EA+ HPY
Sbjct: 259 ENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPY 318
Query: 325 FA 326
Sbjct: 319 IT 320
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 127/254 (50%), Gaps = 22/254 (8%)
Query: 86 LQNLCGGPNVVKLLDIVRDQHS----KTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYEL 141
L + N++ LL++ Q S + ++ E +++ +V+ L + Y +Y++
Sbjct: 76 LMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQM 135
Query: 142 LKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGP 201
L + + HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ P
Sbjct: 136 LVGIKHLHSAGIIHRDLKPSNIVVKSD-ATLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 202 ELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNK 261
E+++ + Y ++D+WS+GC+ MI + F G D+ DQ K+ + LGT +
Sbjct: 195 EVILGM-GYKENVDIWSVGCIMGEMI-KGGVLFPGTDHIDQWNKVIEQLGTPS-----PE 247
Query: 262 YHLELDPQLDALVGRHSRKPWSKF--------INADNQH--LVSPEAIDFLDKLLRYDHQ 311
+ +L P + V + F AD++H L + +A D L K+L D
Sbjct: 248 FMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDAS 307
Query: 312 DRLTAREAMAHPYF 325
R++ EA+ HPY
Sbjct: 308 KRISVDEALQHPYI 321
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 125/246 (50%), Gaps = 22/246 (8%)
Query: 94 NVVKLLDIVRDQHS----KTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCH 149
N++ LL++ Q S + ++ E +++ +V+ L + Y +Y++L + + H
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+++ +
Sbjct: 144 SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM-G 201
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
Y ++D+WS+GC+ MI + F G D+ DQ K+ + LGT ++ +L P
Sbjct: 202 YKENVDIWSVGCIMGEMI-KGGVLFPGTDHIDQWNKVIEQLGTP-----CPEFMKKLQPT 255
Query: 270 LDALVGRHSRKPWSKF--------INADNQH--LVSPEAIDFLDKLLRYDHQDRLTAREA 319
+ V + F AD++H L + +A D L K+L D R++ EA
Sbjct: 256 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 315
Query: 320 MAHPYF 325
+ HPY
Sbjct: 316 LQHPYI 321
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 125/246 (50%), Gaps = 22/246 (8%)
Query: 94 NVVKLLDIVRDQHS----KTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCH 149
N++ LL++ Q S + ++ E +++ +V+ L + Y +Y++L + + H
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+++ +
Sbjct: 144 SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM-G 201
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
Y ++D+WS+GC+ MI + F G D+ DQ K+ + LGT ++ +L P
Sbjct: 202 YKENVDIWSVGCIMGEMI-KGGVLFPGTDHIDQWNKVIEQLGTPS-----PEFMKKLQPT 255
Query: 270 LDALVGRHSRKPWSKF--------INADNQH--LVSPEAIDFLDKLLRYDHQDRLTAREA 319
+ V + F AD++H L + +A D L K+L D R++ EA
Sbjct: 256 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 315
Query: 320 MAHPYF 325
+ HPY
Sbjct: 316 LQHPYI 321
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 125/246 (50%), Gaps = 22/246 (8%)
Query: 94 NVVKLLDIVRDQHS----KTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCH 149
N++ LL++ Q S + ++ E +++ +V+ L + Y +Y++L + + H
Sbjct: 85 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 144
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+++ +
Sbjct: 145 SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM-G 202
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
Y ++D+WS+GC+ MI + F G D+ DQ K+ + LGT ++ +L P
Sbjct: 203 YKENVDIWSVGCIMGEMI-KGGVLFPGTDHIDQWNKVIEQLGTP-----CPEFMKKLQPT 256
Query: 270 LDALVGRHSRKPWSKF--------INADNQH--LVSPEAIDFLDKLLRYDHQDRLTAREA 319
+ V + F AD++H L + +A D L K+L D R++ EA
Sbjct: 257 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 316
Query: 320 MAHPYF 325
+ HPY
Sbjct: 317 LQHPYI 322
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 125/246 (50%), Gaps = 22/246 (8%)
Query: 94 NVVKLLDIVRDQHS----KTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCH 149
N++ LL++ Q S + ++ E +++ +V+ L + Y +Y++L + + H
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+++ +
Sbjct: 144 SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM-G 201
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
Y ++D+WS+GC+ MI + F G D+ DQ K+ + LGT ++ +L P
Sbjct: 202 YKENVDIWSVGCIMGEMI-KGGVLFPGTDHIDQWNKVIEQLGTPS-----PEFMKKLQPT 255
Query: 270 LDALVGRHSRKPWSKF--------INADNQH--LVSPEAIDFLDKLLRYDHQDRLTAREA 319
+ V + F AD++H L + +A D L K+L D R++ EA
Sbjct: 256 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 315
Query: 320 MAHPYF 325
+ HPY
Sbjct: 316 LQHPYI 321
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 127/254 (50%), Gaps = 22/254 (8%)
Query: 86 LQNLCGGPNVVKLLDIVRDQHS----KTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYEL 141
L + N++ LL++ Q S + ++ E +++ +V+ L + Y +Y++
Sbjct: 76 LMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQM 135
Query: 142 LKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGP 201
L + + HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ P
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVVKSD-ATLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 202 ELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNK 261
E+++ + Y ++D+WS+GC+ MI + F G D+ DQ K+ + LGT +
Sbjct: 195 EVILGM-GYKENVDIWSVGCIMGEMI-KGGVLFPGTDHIDQWNKVIEQLGTPS-----PE 247
Query: 262 YHLELDPQLDALVGRHSRKPWSKF--------INADNQH--LVSPEAIDFLDKLLRYDHQ 311
+ +L P + V + F AD++H L + +A D L K+L D
Sbjct: 248 FMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDAS 307
Query: 312 DRLTAREAMAHPYF 325
R++ EA+ HPY
Sbjct: 308 KRISVDEALQHPYI 321
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 124/246 (50%), Gaps = 22/246 (8%)
Query: 94 NVVKLLDIVRDQHS----KTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCH 149
N++ LL++ Q S + ++ E +++ +V+ L + Y +Y++L + + H
Sbjct: 89 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 148
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+++ +
Sbjct: 149 SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM-G 206
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
Y ++D+WS+GC+ M+ K F G D DQ K+ + LGT ++ +L P
Sbjct: 207 YKENVDLWSVGCIMGEMVCHKI-LFPGRDYIDQWNKVIEQLGTP-----CPEFMKKLQPT 260
Query: 270 LDALVGRHSRKPWSKF--------INADNQH--LVSPEAIDFLDKLLRYDHQDRLTAREA 319
+ V + F AD++H L + +A D L K+L D R++ EA
Sbjct: 261 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 320
Query: 320 MAHPYF 325
+ HPY
Sbjct: 321 LQHPYI 326
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 125/246 (50%), Gaps = 22/246 (8%)
Query: 94 NVVKLLDIVRDQHS----KTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCH 149
N++ LL++ Q S + ++ E +++ +V+ L + Y +Y++L + + H
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+++ +
Sbjct: 144 SAGIIHRDLKPSNIVVKSD-ATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM-G 201
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
Y ++D+WS+GC+ MI + F G D+ DQ K+ + LGT ++ +L P
Sbjct: 202 YKENVDIWSVGCIMGEMI-KGGVLFPGTDHIDQWNKVIEQLGTPS-----PEFMKKLQPT 255
Query: 270 LDALVGRHSRKPWSKF--------INADNQH--LVSPEAIDFLDKLLRYDHQDRLTAREA 319
+ V + F AD++H L + +A D L K+L D R++ EA
Sbjct: 256 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 315
Query: 320 MAHPYF 325
+ HPY
Sbjct: 316 LQHPYI 321
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 124/247 (50%), Gaps = 22/247 (8%)
Query: 94 NVVKLLDIVRDQHS----KTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCH 149
N++ LL++ Q + + L+ E +++ +V++ L + Y +Y++L + + H
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLH 143
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+++ +
Sbjct: 144 SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGM-G 201
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
Y ++D+WS+GC+ G + + F G D+ DQ K+ + LGT ++ L P
Sbjct: 202 YAANVDIWSVGCIM-GELVKGCVIFQGTDHIDQWNKVIEQLGTPS-----AEFMAALQPT 255
Query: 270 LDALVGRHSRKPWSKF----------INADNQHLVSPEAIDFLDKLLRYDHQDRLTAREA 319
+ V + P KF ++ + + +A D L K+L D R++ EA
Sbjct: 256 VRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEA 315
Query: 320 MAHPYFA 326
+ HPY
Sbjct: 316 LRHPYIT 322
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 124/246 (50%), Gaps = 22/246 (8%)
Query: 94 NVVKLLDIVRDQHS----KTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCH 149
N++ LL++ Q S + ++ E +++ +V+ L + Y +Y++L + + H
Sbjct: 78 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 137
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+++ +
Sbjct: 138 SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM-G 195
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
Y ++D+WS+GC+ M+ K F G D DQ K+ + LGT ++ +L P
Sbjct: 196 YKENVDLWSVGCIMGEMVCHK-ILFPGRDYIDQWNKVIEQLGTP-----CPEFMKKLQPT 249
Query: 270 LDALVGRHSRKPWSKF--------INADNQH--LVSPEAIDFLDKLLRYDHQDRLTAREA 319
+ V + F AD++H L + +A D L K+L D R++ EA
Sbjct: 250 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 309
Query: 320 MAHPYF 325
+ HPY
Sbjct: 310 LQHPYI 315
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 125/246 (50%), Gaps = 22/246 (8%)
Query: 94 NVVKLLDIVRDQHS----KTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCH 149
N++ LL++ Q S + ++ E +++ +V+ L + Y +Y++L + + H
Sbjct: 86 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 145
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+++ +
Sbjct: 146 SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVILGM-G 203
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
Y ++D+WS+GC+ MI + F G D+ DQ K+ + LGT ++ +L P
Sbjct: 204 YKENVDIWSVGCIMGEMI-KGGVLFPGTDHIDQWNKVIEQLGTP-----CPEFMKKLQPT 257
Query: 270 LDALVGRHSRKPWSKF--------INADNQH--LVSPEAIDFLDKLLRYDHQDRLTAREA 319
+ V + F AD++H L + +A D L K+L D R++ EA
Sbjct: 258 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 317
Query: 320 MAHPYF 325
+ HPY
Sbjct: 318 LQHPYI 323
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 125/246 (50%), Gaps = 22/246 (8%)
Query: 94 NVVKLLDIVRDQHS----KTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCH 149
N++ LL++ Q + + L+ E +++ +V+ L + Y +Y++L + + H
Sbjct: 122 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 181
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+++ +
Sbjct: 182 SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM-G 239
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
Y ++D+WS+GC+ M+ R + F G D DQ K+ + LGT ++ +L P
Sbjct: 240 YKENVDIWSVGCIMGEMV-RHKILFPGRDYIDQWNKVIEQLGTP-----CPEFMKKLQPT 293
Query: 270 LDALVGRHSRKPWSKF--------INADNQH--LVSPEAIDFLDKLLRYDHQDRLTAREA 319
+ V + F AD++H L + +A D L K+L D R++ +A
Sbjct: 294 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 353
Query: 320 MAHPYF 325
+ HPY
Sbjct: 354 LQHPYI 359
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 125/246 (50%), Gaps = 22/246 (8%)
Query: 94 NVVKLLDIVRDQHS----KTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCH 149
N++ LL++ Q + + L+ E +++ +V+ L + Y +Y++L + + H
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLH 143
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+++ +
Sbjct: 144 SAGIIHRDLKPSNIVVKSD-XTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM-G 201
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
Y ++D+WS+GC+ M+ R + F G D DQ K+ + LGT ++ +L P
Sbjct: 202 YKENVDIWSVGCIMGEMV-RHKILFPGRDYIDQWNKVIEQLGTP-----CPEFMKKLQPT 255
Query: 270 LDALVGRHSRKPWSKF--------INADNQH--LVSPEAIDFLDKLLRYDHQDRLTAREA 319
+ V + F AD++H L + +A D L K+L D R++ +A
Sbjct: 256 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 315
Query: 320 MAHPYF 325
+ HPY
Sbjct: 316 LQHPYI 321
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 125/246 (50%), Gaps = 22/246 (8%)
Query: 94 NVVKLLDIVRDQHS----KTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCH 149
N++ LL++ Q + + L+ E +++ +V+ L + Y +Y++L + + H
Sbjct: 77 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLH 136
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+++ +
Sbjct: 137 SAGIIHRDLKPSNIVVKSD-XTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM-G 194
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
Y ++D+WS+GC+ M+ R + F G D DQ K+ + LGT ++ +L P
Sbjct: 195 YKENVDIWSVGCIMGEMV-RHKILFPGRDYIDQWNKVIEQLGTP-----CPEFMKKLQPT 248
Query: 270 LDALVGRHSRKPWSKF--------INADNQH--LVSPEAIDFLDKLLRYDHQDRLTAREA 319
+ V + F AD++H L + +A D L K+L D R++ +A
Sbjct: 249 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 308
Query: 320 MAHPYF 325
+ HPY
Sbjct: 309 LQHPYI 314
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 125/246 (50%), Gaps = 22/246 (8%)
Query: 94 NVVKLLDIVRDQHS----KTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCH 149
N++ LL++ Q + + L+ E +++ +V+ L + Y +Y++L + + H
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLH 143
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+++ +
Sbjct: 144 SAGIIHRDLKPSNIVVKSD-XTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM-G 201
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
Y ++D+WS+GC+ M+ R + F G D DQ K+ + LGT ++ +L P
Sbjct: 202 YKENVDIWSVGCIMGEMV-RHKILFPGRDYIDQWNKVIEQLGTP-----CPEFMKKLQPT 255
Query: 270 LDALVGRHSRKPWSKF--------INADNQH--LVSPEAIDFLDKLLRYDHQDRLTAREA 319
+ V + F AD++H L + +A D L K+L D R++ +A
Sbjct: 256 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 315
Query: 320 MAHPYF 325
+ HPY
Sbjct: 316 LQHPYI 321
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 125/246 (50%), Gaps = 22/246 (8%)
Query: 94 NVVKLLDIVRDQHS----KTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCH 149
N++ LL++ Q + + L+ E +++ +V+ L + Y +Y++L + + H
Sbjct: 122 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 181
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+++ +
Sbjct: 182 SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM-G 239
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
Y ++D+WS+GC+ M+ R + F G D DQ K+ + LGT ++ +L P
Sbjct: 240 YKENVDIWSVGCIMGEMV-RHKILFPGRDYIDQWNKVIEQLGTP-----CPEFMKKLQPT 293
Query: 270 LDALVGRHSRKPWSKF--------INADNQH--LVSPEAIDFLDKLLRYDHQDRLTAREA 319
+ V + F AD++H L + +A D L K+L D R++ +A
Sbjct: 294 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 353
Query: 320 MAHPYF 325
+ HPY
Sbjct: 354 LQHPYI 359
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 125/246 (50%), Gaps = 22/246 (8%)
Query: 94 NVVKLLDIVRDQHS----KTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCH 149
N++ LL++ Q + + L+ E +++ +V+ L + Y +Y++L + + H
Sbjct: 78 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 137
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+++ +
Sbjct: 138 SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM-G 195
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
Y ++D+WS+GC+ M+ R + F G D DQ K+ + LGT ++ +L P
Sbjct: 196 YKENVDIWSVGCIMGEMV-RHKILFPGRDYIDQWNKVIEQLGTP-----CPEFMKKLQPT 249
Query: 270 LDALVGRHSRKPWSKF--------INADNQH--LVSPEAIDFLDKLLRYDHQDRLTAREA 319
+ V + F AD++H L + +A D L K+L D R++ +A
Sbjct: 250 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 309
Query: 320 MAHPYF 325
+ HPY
Sbjct: 310 LQHPYI 315
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 125/246 (50%), Gaps = 22/246 (8%)
Query: 94 NVVKLLDIVRDQHS----KTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCH 149
N++ LL++ Q + + L+ E +++ +V+ L + Y +Y++L + + H
Sbjct: 83 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 142
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+++ +
Sbjct: 143 SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM-G 200
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
Y ++D+WS+GC+ M+ R + F G D DQ K+ + LGT ++ +L P
Sbjct: 201 YKENVDIWSVGCIMGEMV-RHKILFPGRDYIDQWNKVIEQLGTP-----CPEFMKKLQPT 254
Query: 270 LDALVGRHSRKPWSKF--------INADNQH--LVSPEAIDFLDKLLRYDHQDRLTAREA 319
+ V + F AD++H L + +A D L K+L D R++ +A
Sbjct: 255 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 314
Query: 320 MAHPYF 325
+ HPY
Sbjct: 315 LQHPYI 320
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 125/246 (50%), Gaps = 22/246 (8%)
Query: 94 NVVKLLDIVRDQHS----KTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCH 149
N++ LL++ Q + + L+ E +++ +V+ L + Y +Y++L + + H
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+++ +
Sbjct: 144 SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM-G 201
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
Y ++D+WS+GC+ M+ R + F G D DQ K+ + LGT ++ +L P
Sbjct: 202 YKENVDIWSVGCIMGEMV-RHKILFPGRDYIDQWNKVIEQLGTP-----CPEFMKKLQPT 255
Query: 270 LDALVGRHSRKPWSKF--------INADNQH--LVSPEAIDFLDKLLRYDHQDRLTAREA 319
+ V + F AD++H L + +A D L K+L D R++ +A
Sbjct: 256 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 315
Query: 320 MAHPYF 325
+ HPY
Sbjct: 316 LQHPYI 321
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 125/246 (50%), Gaps = 22/246 (8%)
Query: 94 NVVKLLDIVRDQHS----KTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCH 149
N++ LL++ Q + + L+ E +++ +V+ L + Y +Y++L + + H
Sbjct: 85 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 144
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+++ +
Sbjct: 145 SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM-G 202
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
Y ++D+WS+GC+ M+ R + F G D DQ K+ + LGT ++ +L P
Sbjct: 203 YKENVDIWSVGCIMGEMV-RHKILFPGRDYIDQWNKVIEQLGTP-----CPEFMKKLQPT 256
Query: 270 LDALVGRHSRKPWSKF--------INADNQH--LVSPEAIDFLDKLLRYDHQDRLTAREA 319
+ V + F AD++H L + +A D L K+L D R++ +A
Sbjct: 257 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 316
Query: 320 MAHPYF 325
+ HPY
Sbjct: 317 LQHPYI 322
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 125/246 (50%), Gaps = 22/246 (8%)
Query: 94 NVVKLLDIVRDQHS----KTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCH 149
N++ LL++ Q + + L+ E +++ +V+ L + Y +Y++L + + H
Sbjct: 77 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 136
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+++ +
Sbjct: 137 SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM-G 194
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
Y ++D+WS+GC+ M+ R + F G D DQ K+ + LGT ++ +L P
Sbjct: 195 YKENVDIWSVGCIMGEMV-RHKILFPGRDYIDQWNKVIEQLGTP-----CPEFMKKLQPT 248
Query: 270 LDALVGRHSRKPWSKF--------INADNQH--LVSPEAIDFLDKLLRYDHQDRLTAREA 319
+ V + F AD++H L + +A D L K+L D R++ +A
Sbjct: 249 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 308
Query: 320 MAHPYF 325
+ HPY
Sbjct: 309 LQHPYI 314
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 125/246 (50%), Gaps = 22/246 (8%)
Query: 94 NVVKLLDIVRDQHS----KTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCH 149
N++ LL++ Q + + L+ E +++ +V+ L + Y +Y++L + + H
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+++ +
Sbjct: 144 SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM-G 201
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
Y ++D+WS+GC+ M+ R + F G D DQ K+ + LGT ++ +L P
Sbjct: 202 YKENVDIWSVGCIMGEMV-RHKILFPGRDYIDQWNKVIEQLGTP-----CPEFMKKLQPT 255
Query: 270 LDALVGRHSRKPWSKF--------INADNQH--LVSPEAIDFLDKLLRYDHQDRLTAREA 319
+ V + F AD++H L + +A D L K+L D R++ +A
Sbjct: 256 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 315
Query: 320 MAHPYF 325
+ HPY
Sbjct: 316 LQHPYI 321
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 125/246 (50%), Gaps = 22/246 (8%)
Query: 94 NVVKLLDIVRDQHS----KTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCH 149
N++ LL++ Q + + L+ E +++ +V+ L + Y +Y++L + + H
Sbjct: 85 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 144
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+++ +
Sbjct: 145 SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM-G 202
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
Y ++D+WS+GC+ M+ R + F G D DQ K+ + LGT ++ +L P
Sbjct: 203 YKENVDIWSVGCIMGEMV-RHKILFPGRDYIDQWNKVIEQLGTP-----CPEFMKKLQPT 256
Query: 270 LDALVGRHSRKPWSKF--------INADNQH--LVSPEAIDFLDKLLRYDHQDRLTAREA 319
+ V + F AD++H L + +A D L K+L D R++ +A
Sbjct: 257 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 316
Query: 320 MAHPYF 325
+ HPY
Sbjct: 317 LQHPYI 322
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 125/246 (50%), Gaps = 22/246 (8%)
Query: 94 NVVKLLDIVRDQHS----KTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCH 149
N++ LL++ Q + + L+ E +++ +V+ L + Y +Y++L + + H
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+++ +
Sbjct: 144 SAGIIHRDLKPSNIVVKSD-XTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM-G 201
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
Y ++D+WS+GC+ M+ R + F G D DQ K+ + LGT ++ +L P
Sbjct: 202 YKENVDIWSVGCIMGEMV-RHKILFPGRDYIDQWNKVIEQLGTP-----CPEFMKKLQPT 255
Query: 270 LDALVGRHSRKPWSKF--------INADNQH--LVSPEAIDFLDKLLRYDHQDRLTAREA 319
+ V + F AD++H L + +A D L K+L D R++ +A
Sbjct: 256 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 315
Query: 320 MAHPYF 325
+ HPY
Sbjct: 316 LQHPYI 321
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 125/246 (50%), Gaps = 22/246 (8%)
Query: 94 NVVKLLDIVRDQHS----KTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCH 149
N++ LL++ Q + + L+ E +++ +V+ L + Y +Y++L + + H
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+++ +
Sbjct: 144 SAGIIHRDLKPSNIVVKSD-XTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM-G 201
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
Y ++D+WS+GC+ M+ R + F G D DQ K+ + LGT ++ +L P
Sbjct: 202 YKENVDIWSVGCIMGEMV-RHKILFPGRDYIDQWNKVIEQLGTP-----CPEFMKKLQPT 255
Query: 270 LDALVGRHSRKPWSKF--------INADNQH--LVSPEAIDFLDKLLRYDHQDRLTAREA 319
+ V + F AD++H L + +A D L K+L D R++ +A
Sbjct: 256 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 315
Query: 320 MAHPYF 325
+ HPY
Sbjct: 316 LQHPYI 321
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 125/246 (50%), Gaps = 22/246 (8%)
Query: 94 NVVKLLDIVRDQHS----KTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCH 149
N++ LL++ Q + + L+ E +++ +V+ L + Y +Y++L + + H
Sbjct: 78 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 137
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+++ +
Sbjct: 138 SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM-G 195
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
Y ++D+WS+GC+ M+ R + F G D DQ K+ + LGT ++ +L P
Sbjct: 196 YKENVDIWSVGCIMGEMV-RHKILFPGRDYIDQWNKVIEQLGTP-----CPEFMKKLQPT 249
Query: 270 LDALVGRHSRKPWSKF--------INADNQH--LVSPEAIDFLDKLLRYDHQDRLTAREA 319
+ V + F AD++H L + +A D L K+L D R++ +A
Sbjct: 250 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 309
Query: 320 MAHPYF 325
+ HPY
Sbjct: 310 LQHPYI 315
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 115/241 (47%), Gaps = 22/241 (9%)
Query: 93 PNVVKLLDIV---RDQHSKTPSLIFEYVNSTDF-----KVLYPTLTDYDIRYYIYELLKA 144
PNVV+L+D+ R +L+FE+V+ D K P L I+ + + L+
Sbjct: 74 PNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRG 132
Query: 145 LDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELL 204
LD+ H+ I+HRD+KP N+++ ++L D+GLA Y V + +++ PE+L
Sbjct: 133 LDFLHANCIVHRDLKPENILVTSG-GTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVL 191
Query: 205 VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHL 264
+ Y +DMWS+GC+FA M FR++P F G+ DQL KI ++G + + L
Sbjct: 192 LQ-STYATPVDMWSVGCIFAEM-FRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSL 249
Query: 265 ELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPY 324
A R R S + L ++L ++ R++A A+ H Y
Sbjct: 250 P----RGAFPPRGPRPVQSVVPEMEES------GAQLLLEMLTFNPHKRISAFRALQHSY 299
Query: 325 F 325
Sbjct: 300 L 300
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 116/241 (48%), Gaps = 22/241 (9%)
Query: 93 PNVVKLLDIV---RDQHSKTPSLIFEYVNSTDF-----KVLYPTLTDYDIRYYIYELLKA 144
PNVV+L+D+ R +L+FE+V+ D K P L I+ + + L+
Sbjct: 66 PNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRG 124
Query: 145 LDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELL 204
LD+ H+ I+HRD+KP N+++ ++L D+GLA Y + V + +++ PE+L
Sbjct: 125 LDFLHANCIVHRDLKPENILVTSG-GTVKLADFGLARIYSYQMALDPVVVTLWYRAPEVL 183
Query: 205 VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHL 264
+ Y +DMWS+GC+FA M FR++P F G+ DQL KI ++G + + L
Sbjct: 184 LQ-STYATPVDMWSVGCIFAEM-FRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSL 241
Query: 265 ELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPY 324
A R R S + L ++L ++ R++A A+ H Y
Sbjct: 242 ----PRGAFPPRGPRPVQSVVPEMEES------GAQLLLEMLTFNPHKRISAFRALQHSY 291
Query: 325 F 325
Sbjct: 292 L 292
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 135/295 (45%), Gaps = 58/295 (19%)
Query: 95 VVKLLDIV--RDQHSKTPSLIFEYVNSTDFKVLYPT---LTDYDIRYYIYELLKALDYCH 149
VVK+LDIV +D + + +DFK L+ T LT+ I+ +Y LL + Y H
Sbjct: 114 VVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVH 173
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-------------------------FYH 184
S GI+HRD+KP N +++ + +++ D+GLA F H
Sbjct: 174 SAGILHRDLKPANCLVNQDC-SVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPH 232
Query: 185 PG---KEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMI----------FRKE 231
++ V +R+++ PEL++ ++Y ++D+WS+GC+FA ++ +
Sbjct: 233 TKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRG 292
Query: 232 PFFYGHD----NHDQLV----KIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWS 283
P F G + DQ K D+LN N + ++AL +++
Sbjct: 293 PLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIR 352
Query: 284 KFINADNQHLV------SPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQVRAAE 332
F + L S +AI L ++L ++ R+T E +AHP+F +VR AE
Sbjct: 353 IFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRIAE 407
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 115/241 (47%), Gaps = 22/241 (9%)
Query: 93 PNVVKLLDIV---RDQHSKTPSLIFEYVNSTDF-----KVLYPTLTDYDIRYYIYELLKA 144
PNVV+L+D+ R +L+FE+V+ D K P L I+ + + L+
Sbjct: 66 PNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRG 124
Query: 145 LDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELL 204
LD+ H+ I+HRD+KP N+++ ++L D+GLA Y V + +++ PE+L
Sbjct: 125 LDFLHANCIVHRDLKPENILVTSG-GTVKLADFGLARIYSYQMALAPVVVTLWYRAPEVL 183
Query: 205 VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHL 264
+ Y +DMWS+GC+FA M FR++P F G+ DQL KI ++G + + L
Sbjct: 184 LQ-STYATPVDMWSVGCIFAEM-FRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSL 241
Query: 265 ELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPY 324
A R R S + L ++L ++ R++A A+ H Y
Sbjct: 242 ----PRGAFPPRGPRPVQSVVPEMEES------GAQLLLEMLTFNPHKRISAFRALQHSY 291
Query: 325 F 325
Sbjct: 292 L 292
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 149/349 (42%), Gaps = 59/349 (16%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXX----XXXXXXXXLQNLCGGP 93
D+YE+ +GRG Y V+ + N N+ + N
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 87
Query: 94 NVVKLLD-IVRDQHSKTPSL-IFEYVNSTDFKVLYPT---LTDYDIRYYIYELLKALDYC 148
+++L D I+ + K L I + +D K L+ T LT+ ++ +Y LL +
Sbjct: 88 YIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKFI 147
Query: 149 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH-------------------PG--- 186
H GI+HRD+KP N +++ + +++ D+GLA + PG
Sbjct: 148 HESGIIHRDLKPANCLLNQDC-SVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHN 206
Query: 187 ----KEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMI----------FRKEP 232
K+ V +R+++ PEL++ ++Y S+D+WS GC+FA ++ + P
Sbjct: 207 KNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINNPTNRFP 266
Query: 233 FFYGHD------NHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFI 286
F G +H+ K+ + D+LN N + L + + K F
Sbjct: 267 LFPGSSCFPLSPDHNS-KKVHEKSNRDQLNIIFNVIGTPPEEDLKCITKQEVIKYIKLFP 325
Query: 287 NADNQHL------VSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQVR 329
D L +S E ID L+ +LR++ Q R+T +A++HPY VR
Sbjct: 326 TRDGIDLSKKYSSISKEGIDLLESMLRFNAQKRITIDKALSHPYLKDVR 374
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 126/254 (49%), Gaps = 22/254 (8%)
Query: 86 LQNLCGGPNVVKLLDIVRDQHS----KTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYEL 141
L + N++ LL++ Q S + ++ E +++ +V+ L + Y +Y++
Sbjct: 76 LMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQM 135
Query: 142 LKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGP 201
L + + HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ P
Sbjct: 136 LVGIKHLHSAGIIHRDLKPSNIVVKSD-ATLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 202 ELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNK 261
E+++ + Y ++D+WS+G + MI + F G D+ DQ K+ + LGT +
Sbjct: 195 EVILGM-GYKENVDIWSVGVIMGEMI-KGGVLFPGTDHIDQWNKVIEQLGTPS-----PE 247
Query: 262 YHLELDPQLDALVGRHSRKPWSKF--------INADNQH--LVSPEAIDFLDKLLRYDHQ 311
+ +L P + V + F AD++H L + +A D L K+L D
Sbjct: 248 FMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDAS 307
Query: 312 DRLTAREAMAHPYF 325
R++ EA+ HPY
Sbjct: 308 KRISVDEALQHPYI 321
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 126/254 (49%), Gaps = 22/254 (8%)
Query: 86 LQNLCGGPNVVKLLDIVRDQHS----KTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYEL 141
L + N++ LL++ Q S + ++ E +++ +V+ L + Y +Y++
Sbjct: 76 LMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQM 135
Query: 142 LKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGP 201
L + + HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ P
Sbjct: 136 LVGIKHLHSAGIIHRDLKPSNIVVKSD-ATLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 202 ELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNK 261
E+++ + Y ++D+WS+G + MI + F G D+ DQ K+ + LGT +
Sbjct: 195 EVILGM-GYKENVDIWSVGVIMGEMI-KGGVLFPGTDHIDQWNKVIEQLGTPS-----PE 247
Query: 262 YHLELDPQLDALVGRHSRKPWSKF--------INADNQH--LVSPEAIDFLDKLLRYDHQ 311
+ +L P + V + F AD++H L + +A D L K+L D
Sbjct: 248 FMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDAS 307
Query: 312 DRLTAREAMAHPYF 325
R++ EA+ HPY
Sbjct: 308 KRISVDEALQHPYI 321
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 115/241 (47%), Gaps = 22/241 (9%)
Query: 93 PNVVKLLDIV---RDQHSKTPSLIFEYVNSTDF-----KVLYPTLTDYDIRYYIYELLKA 144
PNVV+L+D+ R +L+FE+V+ D K P L I+ + + L+
Sbjct: 66 PNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRG 124
Query: 145 LDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELL 204
LD+ H+ I+HRD+KP N+++ ++L D+GLA Y V + +++ PE+L
Sbjct: 125 LDFLHANCIVHRDLKPENILVTSG-GTVKLADFGLARIYSYQMALFPVVVTLWYRAPEVL 183
Query: 205 VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHL 264
+ Y +DMWS+GC+FA M FR++P F G+ DQL KI ++G + + L
Sbjct: 184 LQ-STYATPVDMWSVGCIFAEM-FRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSL 241
Query: 265 ELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPY 324
A R R S + L ++L ++ R++A A+ H Y
Sbjct: 242 ----PRGAFPPRGPRPVQSVVPEMEES------GAQLLLEMLTFNPHKRISAFRALQHSY 291
Query: 325 F 325
Sbjct: 292 L 292
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 119/241 (49%), Gaps = 17/241 (7%)
Query: 93 PNVVKLLDIVRDQHSKTPS-----LIFEYVNSTDFKVLYP---TLTDYDIRYYIYELLKA 144
PN++ L DI H + P+ L+ E + + +V++ ++ I+Y++Y +L
Sbjct: 89 PNILGLRDIF--VHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLG 146
Query: 145 LDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELL 204
L H G++HRD+ P N+++ + + D+ LA V R+++ PEL+
Sbjct: 147 LHVLHEAGVVHRDLHPGNILLADN-NDITICDFNLAREDTADANKTHYVTHRWYRAPELV 205
Query: 205 VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHL 264
+ + + +DMWS GC+ A M F ++ F G ++QL KI +V+GT ++ +
Sbjct: 206 MQFKGFTKLVDMWSAGCVMAEM-FNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSP 264
Query: 265 ELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPY 324
L + + W+ + + P A+D + K+L ++ Q R++ +A+ HPY
Sbjct: 265 SARDYLRNSLSNVPARAWTAVVPTAD-----PVALDLIAKMLEFNPQRRISTEQALRHPY 319
Query: 325 F 325
F
Sbjct: 320 F 320
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 119/241 (49%), Gaps = 17/241 (7%)
Query: 93 PNVVKLLDIVRDQHSKTPS-----LIFEYVNSTDFKVLYP---TLTDYDIRYYIYELLKA 144
PN++ L DI H + P+ L+ E + + +V++ ++ I+Y++Y +L
Sbjct: 89 PNILGLRDIF--VHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLG 146
Query: 145 LDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELL 204
L H G++HRD+ P N+++ + + D+ LA V R+++ PEL+
Sbjct: 147 LHVLHEAGVVHRDLHPGNILLADN-NDITICDFNLAREDTADANKTHYVTHRWYRAPELV 205
Query: 205 VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHL 264
+ + + +DMWS GC+ A M F ++ F G ++QL KI +V+GT ++ +
Sbjct: 206 MQFKGFTKLVDMWSAGCVMAEM-FNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSP 264
Query: 265 ELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPY 324
L + + W+ + + P A+D + K+L ++ Q R++ +A+ HPY
Sbjct: 265 SARDYLRNSLSNVPARAWTAVVPTAD-----PVALDLIAKMLEFNPQRRISTEQALRHPY 319
Query: 325 F 325
F
Sbjct: 320 F 320
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 149/355 (41%), Gaps = 68/355 (19%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXX----XXXXXXXXLQNLCGGP 93
D+Y + +GRG Y V+ + NT + + N
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 85
Query: 94 NVVKLLD-IVRDQHSKTPSL-IFEYVNSTDFKVLYPT---LTDYDIRYYIYELLKALDYC 148
+++L D I+ D K L I + +D K L+ T LT+ I+ +Y LL ++
Sbjct: 86 YIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFI 145
Query: 149 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV----------------- 191
H GI+HRD+KP N +++ + +++ D+GLA + K+ N+
Sbjct: 146 HESGIIHRDLKPANCLLNQDC-SVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNL 204
Query: 192 ------RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMI----------FRKEPFFY 235
V +R+++ PEL++ ++Y S+D+WS GC+FA ++ + P F
Sbjct: 205 KKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFP 264
Query: 236 G-----------------HDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHS 278
G N DQL I ++GT + N E+ +
Sbjct: 265 GSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLF----- 319
Query: 279 RKPWSKFINADNQHL-VSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQVRAAE 332
P K IN ++ +S + I+ L+ +L+++ R+T +A+ HPY VR +
Sbjct: 320 --PHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRKKK 372
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 111/214 (51%), Gaps = 24/214 (11%)
Query: 134 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMI---DHELRKLRLIDWGLAEFYH----PG 186
++ +Y++L + Y H+ ++HRD+KP N+++ E ++++ D G A ++ P
Sbjct: 130 VKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPL 189
Query: 187 KEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHD-------- 238
+ + V + +++ PELL+ + Y ++D+W++GC+FA ++ EP F+
Sbjct: 190 ADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELL-TSEPIFHCRQEDIKTSNP 248
Query: 239 -NHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWS--KFINADNQHLVS 295
+HDQL +I V+G A + ++ P+ L+ R ++ I +H V
Sbjct: 249 YHHDQLDRIFNVMG---FPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVK 305
Query: 296 PEAIDF--LDKLLRYDHQDRLTAREAMAHPYFAQ 327
P++ F L KLL D R+T+ +AM PYF +
Sbjct: 306 PDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLE 339
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 117/237 (49%), Gaps = 45/237 (18%)
Query: 132 YDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI---DHELR---------------KLR 173
+ +R+ ++L +A+ + H + H D+KP N++ D+EL +R
Sbjct: 137 HQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVR 196
Query: 174 LIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCM----FAGMIFR 229
++D+G A F H + ++ V++R+++ PE++++L + D+WS+GC+ + G
Sbjct: 197 VVDFGSATFDH--EHHSTIVSTRHYRAPEVILEL-GWSQPCDVWSIGCIIFEYYVGFTL- 252
Query: 230 KEPFFYGHDNHDQLVKIAKVLG--------TDELNAYLNKYHLELDPQLDALVGRHSR-- 279
F HDN + L + ++LG Y + L+ D A GR+ R
Sbjct: 253 ----FQTHDNREHLAMMERILGPIPSRMIRKTRKQKYFYRGRLDWDENTSA--GRYVREN 306
Query: 280 -KPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQVRAAESSR 335
KP +++ ++ + + D ++ +L Y+ RLT EA+ HP+FA++RA ++
Sbjct: 307 CKPLRRYLTSEAEE--HHQLFDLIESMLEYEPAKRLTLGEALQHPFFARLRAEPPNK 361
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 109/260 (41%), Gaps = 46/260 (17%)
Query: 112 LIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRK 171
+ Y+ F + +L+ ++R Y+ L KAL H GI+HRDVKP N + + L+K
Sbjct: 97 IAMPYLEHESFLDILNSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKK 156
Query: 172 LRLIDWGLAEFYHPGK-----------------------------EYNVRVASRYFKGPE 202
L+D+GLA+ H K + R + F+ PE
Sbjct: 157 YALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPE 216
Query: 203 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKY 262
+L + ++DMWS G +F ++ + PF+ D+ L +I + G+ E +
Sbjct: 217 VLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTF 276
Query: 263 -----------HLELDPQLDALVGRHSRKP------WSKFINADNQHLVSPEAIDFLDKL 305
+L + L G S P N + + V EA D LDKL
Sbjct: 277 GKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKL 336
Query: 306 LRYDHQDRLTAREAMAHPYF 325
L + R+TA EA+ HP+F
Sbjct: 337 LDLNPASRITAEEALLHPFF 356
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 133/309 (43%), Gaps = 57/309 (18%)
Query: 40 YEVVRKVGRGKYSEVF----EGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGGPNV 95
Y+ V+K+G G Y EV + +V + + L PN+
Sbjct: 39 YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNI 98
Query: 96 VKLLDIVRDQHS--------KTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDY 147
+KL D D+ + K L E ++ F + D I ++L + Y
Sbjct: 99 MKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKF-------NEVDAAVIIKQVLSGVTY 151
Query: 148 CHSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLV 205
H I+HRD+KP N++++ + + ++++D+GL+ + K+ R+ + Y+ PE+L
Sbjct: 152 LHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVL- 210
Query: 206 DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLE 265
+ YD D+WS+G + ++ P F G + + L K+ K KY +
Sbjct: 211 -RKKYDEKCDVWSIGVILF-ILLAGYPPFGGQTDQEILRKVEK-----------GKYTFD 257
Query: 266 LDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 325
P+ W VS A D + ++L++D Q R++A++A+ HP+
Sbjct: 258 -SPE------------WKN---------VSEGAKDLIKQMLQFDSQRRISAQQALEHPWI 295
Query: 326 AQVRAAESS 334
++ + + S
Sbjct: 296 KEMCSKKES 304
Score = 28.5 bits (62), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 23 LCFWNVSSYVIFSDQDDYEVVRKVGRGKYS 52
+ F ++ Y F Q D E++RKV +GKY+
Sbjct: 226 ILFILLAGYPPFGGQTDQEILRKVEKGKYT 255
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 131/310 (42%), Gaps = 58/310 (18%)
Query: 30 SYVIFSDQDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNL 89
S IFSD+ Y+ R +G+G + EV + T + C L+ +
Sbjct: 43 STAIFSDR--YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREV 100
Query: 90 -----CGGPNVVKLLDIVRDQ-------HSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYY 137
PN++KL + D+ T +F+ + S ++ D
Sbjct: 101 QLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISR------KRFSEVDAARI 154
Query: 138 IYELLKALDYCHSQGIMHRDVKPHNVMIDHELR--KLRLIDWGLAEFYHPGKEYNVRVAS 195
I ++L + Y H I+HRD+KP N++++ + + +R+ID+GL+ + K+ ++ +
Sbjct: 155 IRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGT 214
Query: 196 RYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDEL 255
Y+ PE+L YD D+WS G + ++ P F G + +D L K+ K
Sbjct: 215 AYYIAPEVLHGT--YDEKCDVWSTGVILY-ILLSGCPPFNGANEYDILKKVEK------- 264
Query: 256 NAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLT 315
KY EL PQ W K VS A D + K+L Y R++
Sbjct: 265 ----GKYTFEL-PQ------------WKK---------VSESAKDLIRKMLTYVPSMRIS 298
Query: 316 AREAMAHPYF 325
AR+A+ H +
Sbjct: 299 ARDALDHEWI 308
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 131/310 (42%), Gaps = 58/310 (18%)
Query: 30 SYVIFSDQDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNL 89
S IFSD+ Y+ R +G+G + EV + T + C L+ +
Sbjct: 20 STAIFSDR--YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREV 77
Query: 90 -----CGGPNVVKLLDIVRDQ-------HSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYY 137
PN++KL + D+ T +F+ + S ++ D
Sbjct: 78 QLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISR------KRFSEVDAARI 131
Query: 138 IYELLKALDYCHSQGIMHRDVKPHNVMIDHELR--KLRLIDWGLAEFYHPGKEYNVRVAS 195
I ++L + Y H I+HRD+KP N++++ + + +R+ID+GL+ + K+ ++ +
Sbjct: 132 IRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGT 191
Query: 196 RYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDEL 255
Y+ PE+L YD D+WS G + ++ P F G + +D L K+ K
Sbjct: 192 AYYIAPEVLHGT--YDEKCDVWSTGVILY-ILLSGCPPFNGANEYDILKKVEK------- 241
Query: 256 NAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLT 315
KY EL PQ W K VS A D + K+L Y R++
Sbjct: 242 ----GKYTFEL-PQ------------WKK---------VSESAKDLIRKMLTYVPSMRIS 275
Query: 316 AREAMAHPYF 325
AR+A+ H +
Sbjct: 276 ARDALDHEWI 285
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 131/310 (42%), Gaps = 58/310 (18%)
Query: 30 SYVIFSDQDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNL 89
S IFSD+ Y+ R +G+G + EV + T + C L+ +
Sbjct: 44 STAIFSDR--YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREV 101
Query: 90 -----CGGPNVVKLLDIVRDQ-------HSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYY 137
PN++KL + D+ T +F+ + S ++ D
Sbjct: 102 QLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISR------KRFSEVDAARI 155
Query: 138 IYELLKALDYCHSQGIMHRDVKPHNVMIDHELR--KLRLIDWGLAEFYHPGKEYNVRVAS 195
I ++L + Y H I+HRD+KP N++++ + + +R+ID+GL+ + K+ ++ +
Sbjct: 156 IRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGT 215
Query: 196 RYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDEL 255
Y+ PE+L YD D+WS G + ++ P F G + +D L K+ K
Sbjct: 216 AYYIAPEVLHGT--YDEKCDVWSTGVILY-ILLSGCPPFNGANEYDILKKVEK------- 265
Query: 256 NAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLT 315
KY EL PQ W K VS A D + K+L Y R++
Sbjct: 266 ----GKYTFEL-PQ------------WKK---------VSESAKDLIRKMLTYVPSMRIS 299
Query: 316 AREAMAHPYF 325
AR+A+ H +
Sbjct: 300 ARDALDHEWI 309
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 131/310 (42%), Gaps = 58/310 (18%)
Query: 30 SYVIFSDQDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNL 89
S IFSD+ Y+ R +G+G + EV + T + C L+ +
Sbjct: 26 STAIFSDR--YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREV 83
Query: 90 -----CGGPNVVKLLDIVRDQ-------HSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYY 137
PN++KL + D+ T +F+ + S ++ D
Sbjct: 84 QLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISR------KRFSEVDAARI 137
Query: 138 IYELLKALDYCHSQGIMHRDVKPHNVMIDHELR--KLRLIDWGLAEFYHPGKEYNVRVAS 195
I ++L + Y H I+HRD+KP N++++ + + +R+ID+GL+ + K+ ++ +
Sbjct: 138 IRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGT 197
Query: 196 RYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDEL 255
Y+ PE+L YD D+WS G + ++ P F G + +D L K+ K
Sbjct: 198 AYYIAPEVLHGT--YDEKCDVWSTGVILY-ILLSGCPPFNGANEYDILKKVEK------- 247
Query: 256 NAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLT 315
KY EL PQ W K VS A D + K+L Y R++
Sbjct: 248 ----GKYTFEL-PQ------------WKK---------VSESAKDLIRKMLTYVPSMRIS 281
Query: 316 AREAMAHPYF 325
AR+A+ H +
Sbjct: 282 ARDALDHEWI 291
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 115/248 (46%), Gaps = 37/248 (14%)
Query: 114 FEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVM-IDHELRKL 172
FE++ +F+ YP +R+ Y+L AL + H + H D+KP N++ ++ E L
Sbjct: 141 FEFLKENNFQP-YPLP---HVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETL 196
Query: 173 -----------------RLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLD 215
R+ D+G A F H + + VA+R+++ PE++++L + D
Sbjct: 197 YNEHKSCEEKSVKNTSIRVADFGSATFDH--EHHTTIVATRHYRPPEVILEL-GWAQPCD 253
Query: 216 MWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT--------DELNAYLNKYHLELD 267
+WS+GC+ +R F H+N + LV + K+LG Y K L D
Sbjct: 254 VWSIGCILFEY-YRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWD 312
Query: 268 PQL-DALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFA 326
D + + KP ++ D+ L + D + ++L +D R+T EA+ HP+FA
Sbjct: 313 ENSSDGRYVKENCKPLKSYMLQDS--LEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFA 370
Query: 327 QVRAAESS 334
+ E S
Sbjct: 371 GLTPEERS 378
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 115/248 (46%), Gaps = 37/248 (14%)
Query: 114 FEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVM-IDHELRKL 172
FE++ +F+ YP +R+ Y+L AL + H + H D+KP N++ ++ E L
Sbjct: 109 FEFLKENNFQP-YPLP---HVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETL 164
Query: 173 -----------------RLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLD 215
R+ D+G A F H + + VA+R+++ PE++++L + D
Sbjct: 165 YNEHKSCEEKSVKNTSIRVADFGSATFDH--EHHTTIVATRHYRPPEVILEL-GWAQPCD 221
Query: 216 MWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT--------DELNAYLNKYHLELD 267
+WS+GC+ +R F H+N + LV + K+LG Y K L D
Sbjct: 222 VWSIGCILFEY-YRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWD 280
Query: 268 PQL-DALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFA 326
D + + KP ++ D+ L + D + ++L +D R+T EA+ HP+FA
Sbjct: 281 ENSSDGRYVKENCKPLKSYMLQDS--LEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFA 338
Query: 327 QVRAAESS 334
+ E S
Sbjct: 339 GLTPEERS 346
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 115/248 (46%), Gaps = 37/248 (14%)
Query: 114 FEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVM-IDHELRKL 172
FE++ +F+ YP +R+ Y+L AL + H + H D+KP N++ ++ E L
Sbjct: 118 FEFLKENNFQP-YPLP---HVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETL 173
Query: 173 -----------------RLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLD 215
R+ D+G A F H + + VA+R+++ PE++++L + D
Sbjct: 174 YNEHKSCEEKSVKNTSIRVADFGSATFDH--EHHTTIVATRHYRPPEVILEL-GWAQPCD 230
Query: 216 MWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT--------DELNAYLNKYHLELD 267
+WS+GC+ +R F H+N + LV + K+LG Y K L D
Sbjct: 231 VWSIGCILFEY-YRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWD 289
Query: 268 PQL-DALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFA 326
D + + KP ++ D+ L + D + ++L +D R+T EA+ HP+FA
Sbjct: 290 ENSSDGRYVKENCKPLKSYMLQDS--LEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFA 347
Query: 327 QVRAAESS 334
+ E S
Sbjct: 348 GLTPEERS 355
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 129/310 (41%), Gaps = 58/310 (18%)
Query: 30 SYVIFSDQDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNL 89
S IFSD+ Y+ R +G+G + EV + T + C L+ +
Sbjct: 20 STAIFSDR--YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREV 77
Query: 90 -----CGGPNVVKLLDIVRDQ-------HSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYY 137
PN+ KL + D+ T +F+ + + ++ D
Sbjct: 78 QLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEI------ISRKRFSEVDAARI 131
Query: 138 IYELLKALDYCHSQGIMHRDVKPHNVMIDHELR--KLRLIDWGLAEFYHPGKEYNVRVAS 195
I ++L + Y H I+HRD+KP N++++ + + +R+ID+GL+ + K+ ++ +
Sbjct: 132 IRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGT 191
Query: 196 RYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDEL 255
Y+ PE+L YD D+WS G + ++ P F G + +D L K+ K
Sbjct: 192 AYYIAPEVLHGT--YDEKCDVWSTGVILY-ILLSGCPPFNGANEYDILKKVEK------- 241
Query: 256 NAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLT 315
KY EL PQ W K VS A D + K L Y R++
Sbjct: 242 ----GKYTFEL-PQ------------WKK---------VSESAKDLIRKXLTYVPSXRIS 275
Query: 316 AREAMAHPYF 325
AR+A+ H +
Sbjct: 276 ARDALDHEWI 285
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 111/249 (44%), Gaps = 51/249 (20%)
Query: 93 PNVVKLLDIVRDQHS-------KTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKAL 145
PN++KL +I+ D S T +F+ + + +++D I ++ +
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEI------IKRKRFSEHDAARIIKQVFSGI 134
Query: 146 DYCHSQGIMHRDVKPHNVMIDHELR--KLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 203
Y H I+HRD+KP N++++ + + +++ID+GL+ + + R+ + Y+ PE+
Sbjct: 135 TYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEV 194
Query: 204 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYH 263
L YD D+WS G + ++ P FYG + +D L ++ KY
Sbjct: 195 LRGT--YDEKCDVWSAGVILY-ILLSGTPPFYGKNEYDILKRVE-----------TGKYA 240
Query: 264 LELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHP 323
+L PQ W +S +A D + K+L + R+TA + + HP
Sbjct: 241 FDL-PQ------------W---------RTISDDAKDLIRKMLTFHPSLRITATQCLEHP 278
Query: 324 YFAQVRAAE 332
+ + + E
Sbjct: 279 WIQKYSSEE 287
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 109/244 (44%), Gaps = 51/244 (20%)
Query: 93 PNVVKLLDIVRDQHS-------KTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKAL 145
PN++KL +I+ D S T +F+ + + +++D I ++ +
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEI------IKRKRFSEHDAARIIKQVFSGI 134
Query: 146 DYCHSQGIMHRDVKPHNVMIDHELR--KLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 203
Y H I+HRD+KP N++++ + + +++ID+GL+ + + R+ + Y+ PE+
Sbjct: 135 TYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEV 194
Query: 204 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYH 263
L YD D+WS G + ++ P FYG + +D L ++ KY
Sbjct: 195 LRGT--YDEKCDVWSAGVILY-ILLSGTPPFYGKNEYDILKRVET-----------GKYA 240
Query: 264 LELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHP 323
+L PQ W +S +A D + K+L + R+TA + + HP
Sbjct: 241 FDL-PQ------------W---------RTISDDAKDLIRKMLTFHPSLRITATQCLEHP 278
Query: 324 YFAQ 327
+ +
Sbjct: 279 WIQK 282
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 27/215 (12%)
Query: 134 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRK-LRLIDWGLAEFYHPGKEYNVR 192
+R + + +L+ LD H I+H D+KP N+++ + R +++ID+G + + H +
Sbjct: 202 VRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEH--QRVYTX 259
Query: 193 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 252
+ SR+++ PE+++ + Y +DMWSLGC+ A ++ P G D DQL + ++LG
Sbjct: 260 IQSRFYRAPEVILGAR-YGMPIDMWSLGCILAELL-TGYPLLPGEDEGDQLACMIELLGM 317
Query: 253 DE---LNAYLNKYHL-------------ELDPQLDALVGRHSRK------PWSKFINADN 290
L+A + L L G SR+ P S+
Sbjct: 318 PSQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNAL 377
Query: 291 QHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 325
+ P +DFL + L +D R+T +A+ HP+
Sbjct: 378 KGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWL 412
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 109/236 (46%), Gaps = 31/236 (13%)
Query: 113 IFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRK- 171
++E + F+ L +R + + +L+ LD H I+H D+KP N+++ + R
Sbjct: 185 LYELIKKNKFQGFSLPL----VRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSG 240
Query: 172 LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKE 231
+++ID+G + + H + + SR+++ PE+++ + Y +DMWSLGC+ A ++
Sbjct: 241 IKVIDFGSSCYEH--QRVYTXIQSRFYRAPEVILGAR-YGMPIDMWSLGCILAELL-TGY 296
Query: 232 PFFYGHDNHDQLVKIAKVLGTDE---LNAYLNKYHL-------------ELDPQLDALVG 275
P G D DQL + ++LG L+A + L L G
Sbjct: 297 PLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNG 356
Query: 276 RHSRK------PWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 325
SR+ P S+ + P +DFL + L +D R+T +A+ HP+
Sbjct: 357 GRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWL 412
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 109/244 (44%), Gaps = 51/244 (20%)
Query: 93 PNVVKLLDIVRDQHS-------KTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKAL 145
PN++KL +I+ D S T +F+ + + +++D I ++ +
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEI------IKRKRFSEHDAARIIKQVFSGI 134
Query: 146 DYCHSQGIMHRDVKPHNVMIDHELR--KLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 203
Y H I+HRD+KP N++++ + + +++ID+GL+ + + R+ + Y+ PE+
Sbjct: 135 TYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEV 194
Query: 204 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYH 263
L YD D+WS G + ++ P FYG + +D L ++ KY
Sbjct: 195 LRGT--YDEKCDVWSAGVILY-ILLSGTPPFYGKNEYDILKRVE-----------TGKYA 240
Query: 264 LELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHP 323
+L PQ W +S +A D + K+L + R+TA + + HP
Sbjct: 241 FDL-PQ------------W---------RTISDDAKDLIRKMLTFHPSLRITATQCLEHP 278
Query: 324 YFAQ 327
+ +
Sbjct: 279 WIQK 282
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 127/305 (41%), Gaps = 48/305 (15%)
Query: 32 VIFSDQDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCG 91
++FSD Y V +G G YSE ++ TN L+
Sbjct: 23 LVFSD--GYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLR-YGQ 79
Query: 92 GPNVVKLLDIVRDQHSKTPSLIFEYVNSTDF--KVLYPTL-TDYDIRYYIYELLKALDYC 148
PN++ L D+ D K L+ E + + K+L ++ + + ++ + K ++Y
Sbjct: 80 HPNIITLKDVYDD--GKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYL 137
Query: 149 HSQGIMHRDVKPHNVMIDHELRK---LRLIDWGLAEFYHPGKEYNVRVASRY---FKGPE 202
HSQG++HRD+KP N++ E LR+ D+G A+ E + + Y F PE
Sbjct: 138 HSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLR--AENGLLMTPCYTANFVAPE 195
Query: 203 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKY 262
+L Q YD D+WSLG + M+ PF G + + +I +G+ +
Sbjct: 196 VL-KRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPE--EILTRIGSGKFT------ 246
Query: 263 HLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAH 322
++ N + VS A D + K+L D RLTA++ + H
Sbjct: 247 -----------------------LSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQH 283
Query: 323 PYFAQ 327
P+ Q
Sbjct: 284 PWVTQ 288
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 124/302 (41%), Gaps = 52/302 (17%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNLC-----GG 92
D Y+ V+K+G G Y EV + T L +
Sbjct: 21 DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDH 80
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNST---DFKVLYPTLTDYDIRYYIYELLKALDYCH 149
PN++KL + D+ + L+ E D +L ++ D + ++L Y H
Sbjct: 81 PNIMKLYEFFEDK--RNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLH 138
Query: 150 SQGIMHRDVKPHNVMIDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDL 207
I+HRD+KP N++++ + R ++++D+GL+ + G + R+ + Y+ PE+L
Sbjct: 139 KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVL--R 196
Query: 208 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELD 267
+ YD D+WS G + ++ P F G + + L ++ K
Sbjct: 197 KKYDEKCDVWSCGVILY-ILLCGYPPFGGQTDQEILKRVEK------------------- 236
Query: 268 PQLDALVGRHSRKP--WSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 325
G+ S P W++ VS EA + +L Y+ R++A EA+ HP+
Sbjct: 237 -------GKFSFDPPDWTQ---------VSDEAKQLVKLMLTYEPSKRISAEEALNHPWI 280
Query: 326 AQ 327
+
Sbjct: 281 VK 282
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 127/305 (41%), Gaps = 48/305 (15%)
Query: 32 VIFSDQDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCG 91
++FSD Y V +G G YSE ++ TN L+
Sbjct: 23 MVFSD--GYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLR-YGQ 79
Query: 92 GPNVVKLLDIVRDQHSKTPSLIFEYVNSTDF--KVLYPTL-TDYDIRYYIYELLKALDYC 148
PN++ L D+ D K L+ E + + K+L ++ + + ++ + K ++Y
Sbjct: 80 HPNIITLKDVYDD--GKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYL 137
Query: 149 HSQGIMHRDVKPHNVMIDHELRK---LRLIDWGLAEFYHPGKEYNVRVASRY---FKGPE 202
HSQG++HRD+KP N++ E LR+ D+G A+ E + + Y F PE
Sbjct: 138 HSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLR--AENGLLMTPCYTANFVAPE 195
Query: 203 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKY 262
+L Q YD D+WSLG + M+ PF G + + +I +G+ +
Sbjct: 196 VL-KRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPE--EILTRIGSGKFT------ 246
Query: 263 HLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAH 322
++ N + VS A D + K+L D RLTA++ + H
Sbjct: 247 -----------------------LSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQH 283
Query: 323 PYFAQ 327
P+ Q
Sbjct: 284 PWVTQ 288
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 124/302 (41%), Gaps = 52/302 (17%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNLC-----GG 92
D Y+ V+K+G G Y EV + T L +
Sbjct: 4 DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDH 63
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNST---DFKVLYPTLTDYDIRYYIYELLKALDYCH 149
PN++KL + D+ + L+ E D +L ++ D + ++L Y H
Sbjct: 64 PNIMKLYEFFEDK--RNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLH 121
Query: 150 SQGIMHRDVKPHNVMIDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDL 207
I+HRD+KP N++++ + R ++++D+GL+ + G + R+ + Y+ PE+L
Sbjct: 122 KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVL--R 179
Query: 208 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELD 267
+ YD D+WS G + ++ P F G + + L ++ K
Sbjct: 180 KKYDEKCDVWSCGVILY-ILLCGYPPFGGQTDQEILKRVEK------------------- 219
Query: 268 PQLDALVGRHSRKP--WSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 325
G+ S P W++ VS EA + +L Y+ R++A EA+ HP+
Sbjct: 220 -------GKFSFDPPDWTQ---------VSDEAKQLVKLMLTYEPSKRISAEEALNHPWI 263
Query: 326 AQ 327
+
Sbjct: 264 VK 265
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 27/215 (12%)
Query: 134 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRK-LRLIDWGLAEFYHPGKEYNVR 192
+R + + +L+ LD H I+H D+KP N+++ + R +++ID+G + + H +
Sbjct: 202 VRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEH--QRVYXX 259
Query: 193 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 252
+ SR+++ PE+++ + Y +DMWSLGC+ A ++ P G D DQL + ++LG
Sbjct: 260 IQSRFYRAPEVILGAR-YGMPIDMWSLGCILAELL-TGYPLLPGEDEGDQLACMIELLGM 317
Query: 253 DE---LNAYLNKYHL-------------ELDPQLDALVGRHSRK------PWSKFINADN 290
L+A + L L G SR+ P S+
Sbjct: 318 PXQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNAL 377
Query: 291 QHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 325
+ P +DFL + L +D R+T +A+ HP+
Sbjct: 378 KGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWL 412
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 148/329 (44%), Gaps = 55/329 (16%)
Query: 40 YEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNL----CGGPN- 94
YE+V +G G + +V E I+ R +Q L PN
Sbjct: 16 YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNS 75
Query: 95 ---VVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL-----YPTLTDYDIRYYIYELLKALD 146
V++L+ +H ++FE + + + + P D+ IR Y++ K+++
Sbjct: 76 TFRCVQMLEWF--EHHGHICIVFELLGLSTYDFIKENGFLPFRLDH-IRKMAYQICKSVN 132
Query: 147 YCHSQGIMHRDVKPHNVM-------------IDHELRKL-----RLIDWGLAEFYHPGKE 188
+ HS + H D+KP N++ I + R L +++D+G A + +
Sbjct: 133 FLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATY--DDEH 190
Query: 189 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
++ V++R+++ PE+++ L + D+WS+GC+ + F HD+ + L + +
Sbjct: 191 HSTLVSTRHYRAPEVILAL-GWSQPCDVWSIGCILIEY-YLGFTVFPTHDSKEHLAMMER 248
Query: 249 VLGTDELNAYLNK--------YHLELDPQLDALVGRH-SR--KPWSKF-INADNQHLVSP 296
+LG L ++ + +H LD + GR+ SR KP +F ++ D +H
Sbjct: 249 ILGP--LPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEH---E 303
Query: 297 EAIDFLDKLLRYDHQDRLTAREAMAHPYF 325
D + K+L YD R+T REA+ HP+F
Sbjct: 304 RLFDLIQKMLEYDPAKRITLREALKHPFF 332
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 112/258 (43%), Gaps = 48/258 (18%)
Query: 86 LQNLCGGPNVVKLLDIVRDQHSKTPSL-------IFEYVNSTDFKVLYPTLTDYDIRYYI 138
+ N P ++ L D D++ L +F+ + + D+K +++ ++ Y+
Sbjct: 101 IMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYK-----MSEAEVINYM 155
Query: 139 YELLKALDYCHSQGIMHRDVKPHNVMID-HELRKLRLIDWGLAEFYHPGKEYNVRVASRY 197
+ + L + H I+H D+KP N+M + + +++ID+GLA +P + V A+
Sbjct: 156 RQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAE 215
Query: 198 FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNA 257
F PE +VD + + DMW++G + ++ PF G D+L
Sbjct: 216 FAAPE-IVDREPVGFYTDMWAIGVLGYVLLSGLSPF----------------AGEDDLET 258
Query: 258 YLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAR 317
N + + DA VSPEA DF+ LL+ + + RLT
Sbjct: 259 LQNVKRCDWEFDEDAFSS------------------VSPEAKDFIKNLLQKEPRKRLTVH 300
Query: 318 EAMAHPYFAQVRAAESSR 335
+A+ HP+ + +SR
Sbjct: 301 DALEHPWLKGDHSNLTSR 318
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 95/211 (45%), Gaps = 38/211 (18%)
Query: 124 VLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGL-AEF 182
V + + + I +L+AL H+QG++HRD+K ++++ H+ R ++L D+G A+
Sbjct: 239 VTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR-VKLSDFGFCAQV 297
Query: 183 YHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQ 242
V + Y+ PEL+ L Y +D+WSLG M M+ + P+F ++
Sbjct: 298 SKEVPRRKXLVGTPYWMAPELISRL-PYGPEVDIWSLGIMVIEMVDGEPPYF-----NEP 351
Query: 243 LVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFL 302
+K K++ + L P+L N H VSP FL
Sbjct: 352 PLKAMKMIRDN------------LPPRL------------------KNLHKVSPSLKGFL 381
Query: 303 DKLLRYDHQDRLTAREAMAHPYFAQVRAAES 333
D+LL D R TA E + HP+ A+ S
Sbjct: 382 DRLLVRDPAQRATAAELLKHPFLAKAGPPAS 412
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 95/211 (45%), Gaps = 38/211 (18%)
Query: 124 VLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGL-AEF 182
V + + + I +L+AL H+QG++HRD+K ++++ H+ R ++L D+G A+
Sbjct: 119 VTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR-VKLSDFGFCAQV 177
Query: 183 YHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQ 242
V + Y+ PEL+ L Y +D+WSLG M M+ + P+F ++
Sbjct: 178 SKEVPRRKXLVGTPYWMAPELISRL-PYGPEVDIWSLGIMVIEMVDGEPPYF-----NEP 231
Query: 243 LVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFL 302
+K K++ + L P+L N H VSP FL
Sbjct: 232 PLKAMKMIRDN------------LPPRL------------------KNLHKVSPSLKGFL 261
Query: 303 DKLLRYDHQDRLTAREAMAHPYFAQVRAAES 333
D+LL D R TA E + HP+ A+ S
Sbjct: 262 DRLLVRDPAQRATAAELLKHPFLAKAGPPAS 292
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 97/215 (45%), Gaps = 39/215 (18%)
Query: 120 TDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGL 179
TD V + + + I +L+AL H+QG++HRD+K ++++ H+ R ++L D+G
Sbjct: 159 TDI-VTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR-VKLSDFGF 216
Query: 180 -AEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHD 238
A+ V + Y+ PEL+ L Y +D+WSLG M M+ + P+F
Sbjct: 217 CAQVSKEVPRRKXLVGTPYWMAPELISRL-PYGPEVDIWSLGIMVIEMVDGEPPYF---- 271
Query: 239 NHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEA 298
++ +K K++ + L P+L N H VSP
Sbjct: 272 -NEPPLKAMKMIRDN------------LPPRL------------------KNLHKVSPSL 300
Query: 299 IDFLDKLLRYDHQDRLTAREAMAHPYFAQVRAAES 333
FLD+LL D R TA E + HP+ A+ S
Sbjct: 301 KGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPAS 335
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 95/211 (45%), Gaps = 38/211 (18%)
Query: 124 VLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGL-AEF 182
V + + + I +L+AL H+QG++HRD+K ++++ H+ R ++L D+G A+
Sbjct: 117 VTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR-VKLSDFGFCAQV 175
Query: 183 YHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQ 242
V + Y+ PEL+ L Y +D+WSLG M M+ + P+F ++
Sbjct: 176 SKEVPRRKXLVGTPYWMAPELISRL-PYGPEVDIWSLGIMVIEMVDGEPPYF-----NEP 229
Query: 243 LVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFL 302
+K K++ + L P+L N H VSP FL
Sbjct: 230 PLKAMKMIRDN------------LPPRL------------------KNLHKVSPSLKGFL 259
Query: 303 DKLLRYDHQDRLTAREAMAHPYFAQVRAAES 333
D+LL D R TA E + HP+ A+ S
Sbjct: 260 DRLLVRDPAQRATAAELLKHPFLAKAGPPAS 290
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 95/211 (45%), Gaps = 38/211 (18%)
Query: 124 VLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGL-AEF 182
V + + + I +L+AL H+QG++HRD+K ++++ H+ R ++L D+G A+
Sbjct: 112 VTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR-VKLSDFGFCAQV 170
Query: 183 YHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQ 242
V + Y+ PEL+ L Y +D+WSLG M M+ + P+F ++
Sbjct: 171 SKEVPRRKXLVGTPYWMAPELISRL-PYGPEVDIWSLGIMVIEMVDGEPPYF-----NEP 224
Query: 243 LVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFL 302
+K K++ + L P+L N H VSP FL
Sbjct: 225 PLKAMKMIRDN------------LPPRL------------------KNLHKVSPSLKGFL 254
Query: 303 DKLLRYDHQDRLTAREAMAHPYFAQVRAAES 333
D+LL D R TA E + HP+ A+ S
Sbjct: 255 DRLLVRDPAQRATAAELLKHPFLAKAGPPAS 285
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 95/211 (45%), Gaps = 38/211 (18%)
Query: 124 VLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGL-AEF 182
V + + + I +L+AL H+QG++HRD+K ++++ H+ R ++L D+G A+
Sbjct: 108 VTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR-VKLSDFGFCAQV 166
Query: 183 YHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQ 242
V + Y+ PEL+ L Y +D+WSLG M M+ + P+F ++
Sbjct: 167 SKEVPRRKXLVGTPYWMAPELISRL-PYGPEVDIWSLGIMVIEMVDGEPPYF-----NEP 220
Query: 243 LVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFL 302
+K K++ + L P+L N H VSP FL
Sbjct: 221 PLKAMKMIRDN------------LPPRL------------------KNLHKVSPSLKGFL 250
Query: 303 DKLLRYDHQDRLTAREAMAHPYFAQVRAAES 333
D+LL D R TA E + HP+ A+ S
Sbjct: 251 DRLLVRDPAQRATAAELLKHPFLAKAGPPAS 281
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 146/329 (44%), Gaps = 55/329 (16%)
Query: 40 YEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNL----CGGPN- 94
YE+V +G G + +V E I+ R +Q L PN
Sbjct: 16 YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNS 75
Query: 95 ---VVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL-----YPTLTDYDIRYYIYELLKALD 146
V++L+ +H ++FE + + + + P D+ IR Y++ K+++
Sbjct: 76 TFRCVQMLEWF--EHHGHICIVFELLGLSTYDFIKENGFLPFRLDH-IRKMAYQICKSVN 132
Query: 147 YCHSQGIMHRDVKPHNVM-------------IDHELRKL-----RLIDWGLAEFYHPGKE 188
+ HS + H D+KP N++ I + R L +++D+G A + +
Sbjct: 133 FLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATY--DDEH 190
Query: 189 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
++ V R+++ PE+++ L + D+WS+GC+ + F HD+ + L + +
Sbjct: 191 HSTLVXXRHYRAPEVILAL-GWSQPCDVWSIGCILIEY-YLGFTVFPTHDSKEHLAMMER 248
Query: 249 VLGTDELNAYLNK--------YHLELDPQLDALVGRH-SR--KPWSKF-INADNQHLVSP 296
+LG L ++ + +H LD + GR+ SR KP +F ++ D +H
Sbjct: 249 ILGP--LPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEH---E 303
Query: 297 EAIDFLDKLLRYDHQDRLTAREAMAHPYF 325
D + K+L YD R+T REA+ HP+F
Sbjct: 304 RLFDLIQKMLEYDPAKRITLREALKHPFF 332
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 38/205 (18%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGL-AEFYHPGK 187
L + I +L+AL Y H+QG++HRD+K ++++ + R ++L D+G A+
Sbjct: 138 LNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGR-VKLSDFGFCAQISKDVP 196
Query: 188 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 247
+ V + Y+ PE ++ Y +D+WSLG M M+ + P+F D V+
Sbjct: 197 KRKXLVGTPYWMAPE-VISRSLYATEVDIWSLGIMVIEMVDGEPPYF-----SDSPVQAM 250
Query: 248 KVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLR 307
K L R S P K N H VSP DFL+++L
Sbjct: 251 KRL-------------------------RDSPPPKLK-----NSHKVSPVLRDFLERMLV 280
Query: 308 YDHQDRLTAREAMAHPYFAQVRAAE 332
D Q+R TA+E + HP+ Q E
Sbjct: 281 RDPQERATAQELLDHPFLLQTGLPE 305
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 94/202 (46%), Gaps = 10/202 (4%)
Query: 39 DYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQN-----LCGGP 93
+Y++V+ +G G + +V + T ++ + L P
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 94 NVVKLLDIVRDQHSKTPSLIFEYVNST--DFKVLYPTLTDYDIRYYIYELLKALDYCHSQ 151
+++KL D+++ + ++ EY + D+ V +++ + R + +++ A++YCH
Sbjct: 75 HIIKLYDVIKSKDEII--MVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH 132
Query: 152 GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYD 211
I+HRD+KP N+++D L +++ D+GL+ G S + PE++
Sbjct: 133 KIVHRDLKPENLLLDEHL-NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAG 191
Query: 212 YSLDMWSLGCMFAGMIFRKEPF 233
+D+WS G + M+ R+ PF
Sbjct: 192 PEVDVWSCGVILYVMLCRRLPF 213
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 94/202 (46%), Gaps = 10/202 (4%)
Query: 39 DYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQN-----LCGGP 93
+Y++V+ +G G + +V + T ++ + L P
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 94 NVVKLLDIVRDQHSKTPSLIFEYVNST--DFKVLYPTLTDYDIRYYIYELLKALDYCHSQ 151
+++KL D+++ + ++ EY + D+ V +++ + R + +++ A++YCH
Sbjct: 74 HIIKLYDVIKSKDEII--MVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH 131
Query: 152 GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYD 211
I+HRD+KP N+++D L +++ D+GL+ G S + PE++
Sbjct: 132 KIVHRDLKPENLLLDEHL-NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAG 190
Query: 212 YSLDMWSLGCMFAGMIFRKEPF 233
+D+WS G + M+ R+ PF
Sbjct: 191 PEVDVWSCGVILYVMLCRRLPF 212
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 94/202 (46%), Gaps = 10/202 (4%)
Query: 39 DYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQN-----LCGGP 93
+Y++V+ +G G + +V + T ++ + L P
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 94 NVVKLLDIVRDQHSKTPSLIFEYVNST--DFKVLYPTLTDYDIRYYIYELLKALDYCHSQ 151
+++KL D+++ + ++ EY + D+ V +++ + R + +++ A++YCH
Sbjct: 65 HIIKLYDVIKSKDEII--MVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH 122
Query: 152 GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYD 211
I+HRD+KP N+++D L +++ D+GL+ G S + PE++
Sbjct: 123 KIVHRDLKPENLLLDEHL-NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAG 181
Query: 212 YSLDMWSLGCMFAGMIFRKEPF 233
+D+WS G + M+ R+ PF
Sbjct: 182 PEVDVWSCGVILYVMLCRRLPF 203
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 94/202 (46%), Gaps = 10/202 (4%)
Query: 39 DYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQN-----LCGGP 93
+Y++V+ +G G + +V + T ++ + L P
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 94 NVVKLLDIVRDQHSKTPSLIFEYVNST--DFKVLYPTLTDYDIRYYIYELLKALDYCHSQ 151
+++KL D+++ + ++ EY + D+ V +++ + R + +++ A++YCH
Sbjct: 69 HIIKLYDVIKSKDEII--MVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH 126
Query: 152 GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYD 211
I+HRD+KP N+++D L +++ D+GL+ G S + PE++
Sbjct: 127 KIVHRDLKPENLLLDEHL-NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAG 185
Query: 212 YSLDMWSLGCMFAGMIFRKEPF 233
+D+WS G + M+ R+ PF
Sbjct: 186 PEVDVWSCGVILYVMLCRRLPF 207
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 128/303 (42%), Gaps = 47/303 (15%)
Query: 35 SDQDDYEVVRKVGRGKYSEVFEGINVNTNE----RCXXXXXXXXXXXXXXXXXXXLQNLC 90
S D+Y++ ++G+G +S V + + T + + + L
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 91 GGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDF---KVLYPTLTDYDIRYYIYELLKALDY 147
PN+V+L D + ++ L+F+ V + V ++ D + I ++L+++++
Sbjct: 61 KHPNIVRLHDSISEEGFHY--LVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNH 118
Query: 148 CHSQGIMHRDVKPHNVMIDHELR--KLRLIDWGLA-EFYHPGKEYNVRVASRYFKGPELL 204
CH GI+HRD+KP N+++ + + ++L D+GLA E + + + + PE+L
Sbjct: 119 CHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVL 178
Query: 205 VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHL 264
Y +DMW+ G + ++ P F+ D H
Sbjct: 179 RK-DPYGKPVDMWACGVILY-ILLVGYPPFWDEDQH------------------------ 212
Query: 265 ELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPY 324
L Q+ A W V+PEA D ++K+L + R+TA EA+ HP+
Sbjct: 213 RLYQQIKAGAYDFPSPEWDT---------VTPEAKDLINKMLTINPAKRITASEALKHPW 263
Query: 325 FAQ 327
Q
Sbjct: 264 ICQ 266
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 128/303 (42%), Gaps = 47/303 (15%)
Query: 35 SDQDDYEVVRKVGRGKYSEVFEGINVNTNE----RCXXXXXXXXXXXXXXXXXXXLQNLC 90
S D+Y++ ++G+G +S V + + T + + + L
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 91 GGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDF---KVLYPTLTDYDIRYYIYELLKALDY 147
PN+V+L D + ++ L+F+ V + V ++ D + I ++L+++++
Sbjct: 61 KHPNIVRLHDSISEEGFHY--LVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNH 118
Query: 148 CHSQGIMHRDVKPHNVMIDHELR--KLRLIDWGLA-EFYHPGKEYNVRVASRYFKGPELL 204
CH GI+HRD+KP N+++ + + ++L D+GLA E + + + + PE+L
Sbjct: 119 CHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVL 178
Query: 205 VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHL 264
Y +DMW+ G + ++ P F+ D H
Sbjct: 179 RK-DPYGKPVDMWACGVILY-ILLVGYPPFWDEDQH------------------------ 212
Query: 265 ELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPY 324
L Q+ A W V+PEA D ++K+L + R+TA EA+ HP+
Sbjct: 213 RLYQQIKAGAYDFPSPEWDT---------VTPEAKDLINKMLTINPAKRITASEALKHPW 263
Query: 325 FAQ 327
Q
Sbjct: 264 ICQ 266
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 95/204 (46%), Gaps = 51/204 (25%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY---NV 191
R+Y E++ AL+Y H +GI+HRD+KP N++++ ++ +++ D+G A+ P + N
Sbjct: 135 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANX 193
Query: 192 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG 251
V + + PELL + + S D+W+LGC+ ++ PF G++ + AK++
Sbjct: 194 FVGTAQYVSPELLTE-KSAXKSSDLWALGCIIYQLVAGLPPFRAGNEG----LIFAKII- 247
Query: 252 TDELNAYLNKYHLELD-PQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDH 310
LE D P+ KF P+A D ++KLL D
Sbjct: 248 -----------KLEYDFPE--------------KFF---------PKARDLVEKLLVLDA 273
Query: 311 QDRLTAREA------MAHPYFAQV 328
RL E AHP+F V
Sbjct: 274 TKRLGCEEMEGYGPLKAHPFFESV 297
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 106/242 (43%), Gaps = 43/242 (17%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNST---DFKVLYPTLTDYDIRYYIYELLKALDYCH 149
PN++ L D+ ++ LI E V+ DF +L++ + +I ++L ++Y H
Sbjct: 75 PNIITLHDVYENRTDVV--LILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH 132
Query: 150 SQGIMHRDVKPHNVMI---DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 206
++ I H D+KP N+M+ + + ++LID+GLA G E+ + F PE +V+
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPE-IVN 191
Query: 207 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLEL 266
+ DMWS+G + ++ PF G + L I V +Y + E
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANITAV-------SY--DFDEEF 241
Query: 267 DPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFA 326
Q L A DF+ KLL + + RLT +EA+ HP+
Sbjct: 242 FSQTSEL------------------------AKDFIRKLLVKETRKRLTIQEALRHPWIT 277
Query: 327 QV 328
V
Sbjct: 278 PV 279
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 81/148 (54%), Gaps = 8/148 (5%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNS---TDFKVLYPTLTDYDIRYYIYELLKALDYCH 149
PNVVKL++++ D + ++FE VN + L P L++ R+Y +L+K ++Y H
Sbjct: 96 PNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKP-LSEDQARFYFQDLIKGIEYLH 154
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDLQ 208
Q I+HRD+KP N+++ + +++ D+G++ EF + V + F PE L + +
Sbjct: 155 YQKIIHRDIKPSNLLVGED-GHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETR 213
Query: 209 DY--DYSLDMWSLGCMFAGMIFRKEPFF 234
+LD+W++G +F + PF
Sbjct: 214 KIFSGKALDVWAMGVTLYCFVFGQCPFM 241
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 128/310 (41%), Gaps = 59/310 (19%)
Query: 37 QDDYEVVRKVGRGKYSEVFEGINVNTNER-------CXXXXXXXXXXXXXXXXXXXLQNL 89
+D YE+ +G+G +S V IN T ++ + ++
Sbjct: 23 EDVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHM 82
Query: 90 CGGPNVVKLLDIVRD--------QHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYEL 141
P++V+LL+ + L FE V D +Y ++ +Y+ ++
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVY---SEAVASHYMRQI 139
Query: 142 LKALDYCHSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLA-EFYHPGKEYNVRVASRYF 198
L+AL YCH I+HRDVKP NV++ + ++L D+G+A + G RV + +F
Sbjct: 140 LEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHF 199
Query: 199 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDE-LNA 257
PE +V + Y +D+W G + ++ PF+ GT E L
Sbjct: 200 MAPE-VVKREPYGKPVDVWGCGVILFILLSGCLPFY----------------GTKERLFE 242
Query: 258 YLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAR 317
+ K +++P + WS +S A D + ++L D +R+T
Sbjct: 243 GIIKGKYKMNP-----------RQWSH---------ISESAKDLVRRMLMLDPAERITVY 282
Query: 318 EAMAHPYFAQ 327
EA+ HP+ +
Sbjct: 283 EALNHPWLKE 292
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 111/240 (46%), Gaps = 43/240 (17%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTD-FKVLYP--TLTDYDIRYYIYELLKALDYCH 149
PN++KL D+ D+ K L+ E+ + F+ + + D + ++L + Y H
Sbjct: 106 PNIIKLFDVFEDK--KYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLH 163
Query: 150 SQGIMHRDVKPHNVMIDHE--LRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDL 207
I+HRD+KP N++++++ L ++++D+GL+ F+ + R+ + Y+ PE+L
Sbjct: 164 KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLK-- 221
Query: 208 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELD 267
+ Y+ D+WS G + ++ P F G ++ D + K+ K KY+ + +
Sbjct: 222 KKYNEKCDVWSCGVIMY-ILLCGYPPFGGQNDQDIIKKVEK-----------GKYYFDFN 269
Query: 268 PQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQ 327
W +S EA + + +L YD+ R TA EA+ + +
Sbjct: 270 -------------DWKN---------ISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKK 307
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 107/219 (48%), Gaps = 47/219 (21%)
Query: 113 IFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRK- 171
IFE +N++ F+ L + +I Y++++ +AL + HS I H D++P N++ ++ R+
Sbjct: 88 IFERINTSAFE-----LNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENII--YQTRRS 140
Query: 172 --LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD-YDYSLDMWSLGCMFAGMIF 228
+++I++G A PG + + + + PE V D + DMWSLG + ++
Sbjct: 141 STIKIIEFGQARQLKPGDNFRLLFTAPEYYAPE--VHQHDVVSTATDMWSLGTLVYVLLS 198
Query: 229 RKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINA 288
PF + + Q+++ + +NA +Y + + +
Sbjct: 199 GINPFLA--ETNQQIIE-------NIMNA---EYTFDEEAFKE----------------- 229
Query: 289 DNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQ 327
+S EA+DF+D+LL + + R+TA EA+ HP+ Q
Sbjct: 230 -----ISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQ 263
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 113/248 (45%), Gaps = 45/248 (18%)
Query: 86 LQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNST---DFKVLYPTLTDYDIRYYIYELL 142
L+ + G P+++ L+D + S L+F+ + D+ L++ + R + LL
Sbjct: 153 LRQVAGHPHIITLIDSY--ESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLL 210
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 202
+A+ + H+ I+HRD+KP N+++D + ++RL D+G + PG++ + + PE
Sbjct: 211 EAVSFLHANNIVHRDLKPENILLDDNM-QIRLSDFGFSCHLEPGEKLRELCGTPGYLAPE 269
Query: 203 LLVDLQD-----YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNA 257
+L D Y +D+W+ G + ++ PF++ Q++ + ++
Sbjct: 270 ILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWH----RRQILMLRMIME------ 319
Query: 258 YLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAR 317
+Y P+ D D V D + +LL+ D + RLTA
Sbjct: 320 --GQYQFS-SPEWD-----------------DRSSTVK----DLISRLLQVDPEARLTAE 355
Query: 318 EAMAHPYF 325
+A+ HP+F
Sbjct: 356 QALQHPFF 363
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 95/204 (46%), Gaps = 51/204 (25%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY---NV 191
R+Y E++ AL+Y H +GI+HRD+KP N++++ ++ +++ D+G A+ P + N
Sbjct: 135 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANX 193
Query: 192 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG 251
V + + PELL + + S D+W+LGC+ ++ PF G++ + AK++
Sbjct: 194 FVGTAQYVSPELLTE-KSACKSSDLWALGCIIYQLVAGLPPFRAGNEG----LIFAKII- 247
Query: 252 TDELNAYLNKYHLELD-PQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDH 310
LE D P+ KF P+A D ++KLL D
Sbjct: 248 -----------KLEYDFPE--------------KFF---------PKARDLVEKLLVLDA 273
Query: 311 QDRLTAREA------MAHPYFAQV 328
RL E AHP+F V
Sbjct: 274 TKRLGCEEMEGYGPLKAHPFFESV 297
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 102/240 (42%), Gaps = 43/240 (17%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDF--KVLYP-TLTDYDIRYYIYELLKALDYCH 149
PN+++L + D L+ E + +V++ + D + ++L A+ YCH
Sbjct: 83 PNIIRLYETFEDNTDIY--LVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCH 140
Query: 150 SQGIMHRDVKPHNVM--IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDL 207
+ HRD+KP N + D L+LID+GLA + PGK +V + Y+ P++L L
Sbjct: 141 KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGL 200
Query: 208 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELD 267
Y D WS G M ++ PF D + ++KI + T +LN
Sbjct: 201 --YGPECDEWSAGVMMYVLLCGYPPFSAPTD-XEVMLKIREGTFTFPEKDWLN------- 250
Query: 268 PQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQ 327
VSP+A + +LL + R+T+ +A+ H +F +
Sbjct: 251 --------------------------VSPQAESLIRRLLTKSPKQRITSLQALEHEWFEK 284
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 102/240 (42%), Gaps = 43/240 (17%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDF--KVLYP-TLTDYDIRYYIYELLKALDYCH 149
PN+++L + D L+ E + +V++ + D + ++L A+ YCH
Sbjct: 66 PNIIRLYETFEDNTDIY--LVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCH 123
Query: 150 SQGIMHRDVKPHNVM--IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDL 207
+ HRD+KP N + D L+LID+GLA + PGK +V + Y+ P++L L
Sbjct: 124 KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGL 183
Query: 208 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELD 267
Y D WS G M ++ PF D + ++KI + T +LN
Sbjct: 184 --YGPECDEWSAGVMMYVLLCGYPPFSAPTD-XEVMLKIREGTFTFPEKDWLN------- 233
Query: 268 PQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQ 327
VSP+A + +LL + R+T+ +A+ H +F +
Sbjct: 234 --------------------------VSPQAESLIRRLLTKSPKQRITSLQALEHEWFEK 267
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 77/144 (53%), Gaps = 6/144 (4%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNST---DFKVLYPTLTDYDIRYYIYELLKALDYCH 149
PN+VKL +++ + KT LI EY + D+ V + + + + R +++ A+ YCH
Sbjct: 71 PNIVKLFEVIETE--KTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCH 128
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
+ I+HRD+K N+++D ++ +++ D+G + + G + + S + PEL +
Sbjct: 129 QKRIVHRDLKAENLLLDADM-NIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKY 187
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPF 233
+D+WSLG + ++ PF
Sbjct: 188 DGPEVDVWSLGVILYTLVSGSLPF 211
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 64/107 (59%), Gaps = 5/107 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY---NV 191
R+Y E++ AL+Y H +GI+HRD+KP N++++ ++ +++ D+G A+ P + N
Sbjct: 135 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANS 193
Query: 192 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHD 238
V + + PELL + + S D+W+LGC+ ++ PF G++
Sbjct: 194 FVGTAQYVSPELLTE-KSASKSSDLWALGCIIYQLVAGLPPFRAGNE 239
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 97/202 (48%), Gaps = 10/202 (4%)
Query: 39 DYEVVRKVGRGKYSEVFEGINVNTNE----RCXXXXXXXXXXXXXXXXXXXLQNLCGGPN 94
+Y +++ +G+G +++V ++ T + R + + PN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 95 VVKLLDIVRDQHSKTPSLIFEYVNST---DFKVLYPTLTDYDIRYYIYELLKALDYCHSQ 151
+VKL +++ + KT L+ EY + D+ V + + + + R +++ A+ YCH +
Sbjct: 75 IVKLFEVIETE--KTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 152 GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYD 211
I+HRD+K N+++D ++ +++ D+G + + G + + S + PEL +
Sbjct: 133 FIVHRDLKAENLLLDADM-NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDG 191
Query: 212 YSLDMWSLGCMFAGMIFRKEPF 233
+D+WSLG + ++ PF
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPF 213
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 127/310 (40%), Gaps = 59/310 (19%)
Query: 37 QDDYEVVRKVGRGKYSEVFEGINVNTNER-------CXXXXXXXXXXXXXXXXXXXLQNL 89
+D YE+ +G+G +S V IN T ++ + ++
Sbjct: 25 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHM 84
Query: 90 CGGPNVVKLLDIVRD--------QHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYEL 141
P++V+LL+ + L FE V D +Y ++ +Y+ ++
Sbjct: 85 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVY---SEAVASHYMRQI 141
Query: 142 LKALDYCHSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLA-EFYHPGKEYNVRVASRYF 198
L+AL YCH I+HRDVKPH V++ + ++L +G+A + G RV + +F
Sbjct: 142 LEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHF 201
Query: 199 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDE-LNA 257
PE +V + Y +D+W G + ++ PF+ GT E L
Sbjct: 202 MAPE-VVKREPYGKPVDVWGCGVILFILLSGCLPFY----------------GTKERLFE 244
Query: 258 YLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAR 317
+ K +++P + WS +S A D + ++L D +R+T
Sbjct: 245 GIIKGKYKMNP-----------RQWSH---------ISESAKDLVRRMLMLDPAERITVY 284
Query: 318 EAMAHPYFAQ 327
EA+ HP+ +
Sbjct: 285 EALNHPWLKE 294
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 120/297 (40%), Gaps = 51/297 (17%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTN-----ERCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
+D+E+ R +G+GK+ V+ N+ + +Q+
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYD---IRYYIYELLKALDYCH 149
PN+++L D S LI EY L+ +D YI EL AL YCH
Sbjct: 68 PNILRLYGYFHD--STRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S+ ++HRD+KP N+++ +L++ D+G + + P + + PE +++ +
Sbjct: 126 SKKVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRAALCGTLDYLPPE-MIEGRM 182
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
+D +D+WSLG + + K PF E N Y + Y
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPF--------------------EANTYQDTYK------ 216
Query: 270 LDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFA 326
R SR +F D V+ A D + +LL+++ R RE + HP+
Sbjct: 217 ------RISR---VEFTFPD---FVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 261
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 64/107 (59%), Gaps = 5/107 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY---NV 191
R+Y E++ AL+Y H +GI+HRD+KP N++++ ++ +++ D+G A+ P + N
Sbjct: 133 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANA 191
Query: 192 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHD 238
V + + PELL + + S D+W+LGC+ ++ PF G++
Sbjct: 192 FVGTAQYVSPELLTE-KSACKSSDLWALGCIIYQLVAGLPPFRAGNE 237
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 127/311 (40%), Gaps = 47/311 (15%)
Query: 37 QDDYEVVRKVGRGKYSEVFEGINVNTNE----RCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
Q Y++ ++G+G +S V + V + + + L
Sbjct: 21 QSMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 80
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDF---KVLYPTLTDYDIRYYIYELLKALDYCH 149
PN+V+L D + ++ LIF+ V + V ++ D + I ++L+A+ +CH
Sbjct: 81 PNIVRLHDSISEEGHHY--LIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCH 138
Query: 150 SQGIMHRDVKPHNVMIDHELR--KLRLIDWGLA-EFYHPGKEYNVRVASRYFKGPELLVD 206
G++HRD+KP N+++ +L+ ++L D+GLA E + + + + PE+L
Sbjct: 139 QMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRK 198
Query: 207 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLEL 266
Y +D+W+ G + ++ P F+ D H L
Sbjct: 199 -DPYGKPVDLWACGVILY-ILLVGYPPFWDEDQH------------------------RL 232
Query: 267 DPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFA 326
Q+ A W V+PEA D ++K+L + R+TA EA+ HP+ +
Sbjct: 233 YQQIKAGAYDFPSPEWDT---------VTPEAKDLINKMLTINPSKRITAAEALKHPWIS 283
Query: 327 QVRAAESSRTR 337
S R
Sbjct: 284 HRSTVASCMHR 294
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 127/310 (40%), Gaps = 59/310 (19%)
Query: 37 QDDYEVVRKVGRGKYSEVFEGINVNTNER-------CXXXXXXXXXXXXXXXXXXXLQNL 89
+D YE+ +G+G +S V IN T ++ + ++
Sbjct: 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHM 82
Query: 90 CGGPNVVKLLDIVRD--------QHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYEL 141
P++V+LL+ + L FE V D +Y ++ +Y+ ++
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVY---SEAVASHYMRQI 139
Query: 142 LKALDYCHSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLA-EFYHPGKEYNVRVASRYF 198
L+AL YCH I+HRDVKPH V++ + ++L +G+A + G RV + +F
Sbjct: 140 LEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHF 199
Query: 199 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDE-LNA 257
PE +V + Y +D+W G + ++ PF+ GT E L
Sbjct: 200 MAPE-VVKREPYGKPVDVWGCGVILFILLSGCLPFY----------------GTKERLFE 242
Query: 258 YLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAR 317
+ K +++P + WS +S A D + ++L D +R+T
Sbjct: 243 GIIKGKYKMNP-----------RQWSH---------ISESAKDLVRRMLMLDPAERITVY 282
Query: 318 EAMAHPYFAQ 327
EA+ HP+ +
Sbjct: 283 EALNHPWLKE 292
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 95/213 (44%), Gaps = 19/213 (8%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNST---DFKVLYPTLTDYDIRYYIYELLKALDYCH 149
PN++ L DI ++ LI E V+ DF +LT+ + ++ ++L + Y H
Sbjct: 68 PNIITLHDIFENKTDVV--LILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLH 125
Query: 150 SQGIMHRDVKPHNVM-IDHEL--RKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 206
S+ I H D+KP N+M +D + +++LID+G+A G E+ + F PE +V+
Sbjct: 126 SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPE-IVN 184
Query: 207 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKV---------LGTDELNA 257
+ DMWS+G + ++ PF G + L I+ V T EL
Sbjct: 185 YEPLGLEADMWSIGVITYILLSGASPFL-GETKQETLTNISAVNYDFDEEYFSNTSELAK 243
Query: 258 YLNKYHLELDPQLDALVGRHSRKPWSKFINADN 290
+ L DP+ + + W K I N
Sbjct: 244 DFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRRN 276
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 77/144 (53%), Gaps = 6/144 (4%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNST---DFKVLYPTLTDYDIRYYIYELLKALDYCH 149
PN+VKL +++ + KT LI EY + D+ V + + + + R +++ A+ YCH
Sbjct: 74 PNIVKLFEVIETE--KTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCH 131
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
+ I+HRD+K N+++D ++ +++ D+G + + G + + + + PEL +
Sbjct: 132 QKRIVHRDLKAENLLLDADM-NIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKY 190
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPF 233
+D+WSLG + ++ PF
Sbjct: 191 DGPEVDVWSLGVILYTLVSGSLPF 214
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 105/241 (43%), Gaps = 43/241 (17%)
Query: 94 NVVKLLDIVRDQHSKTPSLIFEYVNST---DFKVLYPTLTDYDIRYYIYELLKALDYCHS 150
NV+ L D+ ++ LI E V+ DF +L++ + +I ++L ++Y H+
Sbjct: 76 NVITLHDVYENRTDVV--LILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 151 QGIMHRDVKPHNVMI---DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDL 207
+ I H D+KP N+M+ + + ++LID+GLA G E+ + F PE +V+
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPE-IVNY 192
Query: 208 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELD 267
+ DMWS+G + ++ PF G + L I V +Y + E
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANITAV-------SY--DFDEEFF 242
Query: 268 PQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQ 327
Q L A DF+ KLL + + RLT +EA+ HP+
Sbjct: 243 SQTSEL------------------------AKDFIRKLLVKETRKRLTIQEALRHPWITP 278
Query: 328 V 328
V
Sbjct: 279 V 279
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 105/241 (43%), Gaps = 43/241 (17%)
Query: 94 NVVKLLDIVRDQHSKTPSLIFEYVNST---DFKVLYPTLTDYDIRYYIYELLKALDYCHS 150
NV+ L D+ ++ LI E V+ DF +L++ + +I ++L ++Y H+
Sbjct: 76 NVITLHDVYENRTDVV--LILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 151 QGIMHRDVKPHNVMI---DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDL 207
+ I H D+KP N+M+ + + ++LID+GLA G E+ + F PE +V+
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPE-IVNY 192
Query: 208 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELD 267
+ DMWS+G + ++ PF G + L I V +Y + E
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANITAV-------SY--DFDEEFF 242
Query: 268 PQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQ 327
Q L A DF+ KLL + + RLT +EA+ HP+
Sbjct: 243 SQTSEL------------------------AKDFIRKLLVKETRKRLTIQEALRHPWITP 278
Query: 328 V 328
V
Sbjct: 279 V 279
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 105/241 (43%), Gaps = 43/241 (17%)
Query: 94 NVVKLLDIVRDQHSKTPSLIFEYVNST---DFKVLYPTLTDYDIRYYIYELLKALDYCHS 150
NV+ L D+ ++ LI E V+ DF +L++ + +I ++L ++Y H+
Sbjct: 76 NVITLHDVYENRTDVV--LILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 151 QGIMHRDVKPHNVMI---DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDL 207
+ I H D+KP N+M+ + + ++LID+GLA G E+ + F PE +V+
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPE-IVNY 192
Query: 208 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELD 267
+ DMWS+G + ++ PF G + L I V +Y
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANITSV-------SY--------- 235
Query: 268 PQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQ 327
D H+ S A DF+ KLL + + RLT +EA+ HP+
Sbjct: 236 -DFDEEFFSHT----------------SELAKDFIRKLLVKETRKRLTIQEALRHPWITP 278
Query: 328 V 328
V
Sbjct: 279 V 279
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 77/144 (53%), Gaps = 6/144 (4%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNST---DFKVLYPTLTDYDIRYYIYELLKALDYCH 149
PN+VKL +++ + KT L+ EY + D+ V + + + + R +++ A+ YCH
Sbjct: 74 PNIVKLFEVI--ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH 131
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
+ I+HRD+K N+++D ++ +++ D+G + + G + + S + PEL +
Sbjct: 132 QKYIVHRDLKAENLLLDGDM-NIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKY 190
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPF 233
+D+WSLG + ++ PF
Sbjct: 191 DGPEVDVWSLGVILYTLVSGSLPF 214
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 105/241 (43%), Gaps = 43/241 (17%)
Query: 94 NVVKLLDIVRDQHSKTPSLIFEYVNST---DFKVLYPTLTDYDIRYYIYELLKALDYCHS 150
NV+ L D+ ++ LI E V+ DF +L++ + +I ++L ++Y H+
Sbjct: 76 NVITLHDVYENRTDVV--LILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 151 QGIMHRDVKPHNVMI---DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDL 207
+ I H D+KP N+M+ + + ++LID+GLA G E+ + F PE +V+
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPE-IVNY 192
Query: 208 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELD 267
+ DMWS+G + ++ PF G + L I V +Y
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANITSV-------SY--------- 235
Query: 268 PQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQ 327
D H+ S A DF+ KLL + + RLT +EA+ HP+
Sbjct: 236 -DFDEEFFSHT----------------SELAKDFIRKLLVKETRKRLTIQEALRHPWITP 278
Query: 328 V 328
V
Sbjct: 279 V 279
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 82/142 (57%), Gaps = 11/142 (7%)
Query: 113 IFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQ--GIMHRDVKPHNVMIDHELR 170
+++ + +T+F+ + LT R + ++ AL + + I+H D+KP N+++ + R
Sbjct: 123 LYDLLRNTNFRGVSLNLT----RKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKR 178
Query: 171 K-LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFR 229
++++D+G + G+ + SR+++ PE+L+ + YD ++DMWSLGC+ M
Sbjct: 179 SAIKIVDFGSS--CQLGQRIYQXIQSRFYRSPEVLLGM-PYDLAIDMWSLGCILVEM-HT 234
Query: 230 KEPFFYGHDNHDQLVKIAKVLG 251
EP F G + DQ+ KI +VLG
Sbjct: 235 GEPLFSGANEVDQMNKIVEVLG 256
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 64/107 (59%), Gaps = 5/107 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY---NV 191
R+Y E++ AL+Y H +GI+HRD+KP N++++ ++ +++ D+G A+ P + N
Sbjct: 135 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANX 193
Query: 192 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHD 238
V + + PELL + + S D+W+LGC+ ++ PF G++
Sbjct: 194 FVGTAQYVSPELLTE-KSACKSSDLWALGCIIYQLVAGLPPFRAGNE 239
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 64/107 (59%), Gaps = 5/107 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY---NV 191
R+Y E++ AL+Y H +GI+HRD+KP N++++ ++ +++ D+G A+ P + N
Sbjct: 136 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANX 194
Query: 192 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHD 238
V + + PELL + + S D+W+LGC+ ++ PF G++
Sbjct: 195 FVGTAQYVSPELLTE-KSACKSSDLWALGCIIYQLVAGLPPFRAGNE 240
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 97/202 (48%), Gaps = 10/202 (4%)
Query: 39 DYEVVRKVGRGKYSEVFEGINVNTNE----RCXXXXXXXXXXXXXXXXXXXLQNLCGGPN 94
+Y +++ +G+G +++V ++ T + R + + PN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 95 VVKLLDIVRDQHSKTPSLIFEYVNST---DFKVLYPTLTDYDIRYYIYELLKALDYCHSQ 151
+VKL +++ + KT L+ EY + D+ V + + + + R +++ A+ YCH +
Sbjct: 75 IVKLFEVIETE--KTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 152 GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYD 211
I+HRD+K N+++D ++ +++ D+G + + G + + S + PEL +
Sbjct: 133 FIVHRDLKAENLLLDADM-NIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYDG 191
Query: 212 YSLDMWSLGCMFAGMIFRKEPF 233
+D+WSLG + ++ PF
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPF 213
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 115/241 (47%), Gaps = 48/241 (19%)
Query: 94 NVVKLLDIVRDQHSKTPSLIFEYVNSTDF--KVLYPT--LTDYDIRYYIYELLKALDYCH 149
N+++L D ++ L+ EYV+ + +++ + LT+ D ++ ++ + + + H
Sbjct: 147 NLIQLYDAFESKNDIV--LVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMH 204
Query: 150 SQGIMHRDVKPHNVM-IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 208
I+H D+KP N++ ++ + +++++ID+GLA Y P ++ V + F PE++
Sbjct: 205 QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVV---- 260
Query: 209 DYD---YSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLE 265
+YD + DMWS+G + ++ PF +D A+ L N ++ LE
Sbjct: 261 NYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDND--------AETLN----NILACRWDLE 308
Query: 266 LDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 325
+ D +S EA +F+ KLL + R++A EA+ HP+
Sbjct: 309 DEEFQD----------------------ISEEAKEFISKLLIKEKSWRISASEALKHPWL 346
Query: 326 A 326
+
Sbjct: 347 S 347
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 64/107 (59%), Gaps = 5/107 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY---NV 191
R+Y E++ AL+Y H +GI+HRD+KP N++++ ++ +++ D+G A+ P + N
Sbjct: 138 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANX 196
Query: 192 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHD 238
V + + PELL + + S D+W+LGC+ ++ PF G++
Sbjct: 197 FVGTAQYVSPELLTE-KSACKSSDLWALGCIIYQLVAGLPPFRAGNE 242
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 95/213 (44%), Gaps = 19/213 (8%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNST---DFKVLYPTLTDYDIRYYIYELLKALDYCH 149
PN++ L DI ++ LI E V+ DF +LT+ + ++ ++L + Y H
Sbjct: 89 PNIITLHDIFENKTDVV--LILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLH 146
Query: 150 SQGIMHRDVKPHNVM-IDHEL--RKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 206
S+ I H D+KP N+M +D + +++LID+G+A G E+ + F PE +V+
Sbjct: 147 SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPE-IVN 205
Query: 207 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKV---------LGTDELNA 257
+ DMWS+G + ++ PF G + L I+ V T EL
Sbjct: 206 YEPLGLEADMWSIGVITYILLSGASPFL-GETKQETLTNISAVNYDFDEEYFSNTSELAK 264
Query: 258 YLNKYHLELDPQLDALVGRHSRKPWSKFINADN 290
+ L DP+ + + W K I N
Sbjct: 265 DFIRRLLVKDPKRRMXIAQSLEHSWIKAIRRRN 297
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 64/107 (59%), Gaps = 5/107 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY---NV 191
R+Y E++ AL+Y H +GI+HRD+KP N++++ ++ +++ D+G A+ P + N
Sbjct: 135 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANX 193
Query: 192 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHD 238
V + + PELL + + S D+W+LGC+ ++ PF G++
Sbjct: 194 FVGTAQYVSPELLTE-KSACKSSDLWALGCIIYQLVAGLPPFRAGNE 239
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 64/107 (59%), Gaps = 5/107 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY---NV 191
R+Y E++ AL+Y H +GI+HRD+KP N++++ ++ +++ D+G A+ P + N
Sbjct: 133 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANX 191
Query: 192 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHD 238
V + + PELL + + S D+W+LGC+ ++ PF G++
Sbjct: 192 FVGTAQYVSPELLTE-KSACKSSDLWALGCIIYQLVAGLPPFRAGNE 237
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 64/107 (59%), Gaps = 5/107 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY---NV 191
R+Y E++ AL+Y H +GI+HRD+KP N++++ ++ +++ D+G A+ P + N
Sbjct: 133 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANX 191
Query: 192 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHD 238
V + + PELL + + S D+W+LGC+ ++ PF G++
Sbjct: 192 FVGTAQYVSPELLTE-KSACKSSDLWALGCIIYQLVAGLPPFRAGNE 237
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 82/142 (57%), Gaps = 11/142 (7%)
Query: 113 IFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQ--GIMHRDVKPHNVMIDHELR 170
+++ + +T+F+ + LT R + ++ AL + + I+H D+KP N+++ + R
Sbjct: 142 LYDLLRNTNFRGVSLNLT----RKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKR 197
Query: 171 K-LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFR 229
++++D+G + G+ + SR+++ PE+L+ + YD ++DMWSLGC+ M
Sbjct: 198 SAIKIVDFGSS--CQLGQRIYQXIQSRFYRSPEVLLGM-PYDLAIDMWSLGCILVEM-HT 253
Query: 230 KEPFFYGHDNHDQLVKIAKVLG 251
EP F G + DQ+ KI +VLG
Sbjct: 254 GEPLFSGANEVDQMNKIVEVLG 275
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 64/107 (59%), Gaps = 5/107 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY---NV 191
R+Y E++ AL+Y H +GI+HRD+KP N++++ ++ +++ D+G A+ P + N
Sbjct: 136 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANS 194
Query: 192 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHD 238
V + + PELL + + S D+W+LGC+ ++ PF G++
Sbjct: 195 FVGTAQYVSPELLTE-KSACKSSDLWALGCIIYQLVAGLPPFRAGNE 240
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 97/202 (48%), Gaps = 10/202 (4%)
Query: 39 DYEVVRKVGRGKYSEVFEGINVNTNE----RCXXXXXXXXXXXXXXXXXXXLQNLCGGPN 94
+Y +++ +G+G +++V ++ T + + + + PN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 95 VVKLLDIVRDQHSKTPSLIFEYVNST---DFKVLYPTLTDYDIRYYIYELLKALDYCHSQ 151
+VKL +++ + KT L+ EY + D+ V + + + + R +++ A+ YCH +
Sbjct: 75 IVKLFEVIETE--KTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 152 GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYD 211
I+HRD+K N+++D ++ +++ D+G + + G + + S + PEL +
Sbjct: 133 FIVHRDLKAENLLLDADM-NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDG 191
Query: 212 YSLDMWSLGCMFAGMIFRKEPF 233
+D+WSLG + ++ PF
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPF 213
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 64/107 (59%), Gaps = 5/107 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY---NV 191
R+Y E++ AL+Y H +GI+HRD+KP N++++ ++ +++ D+G A+ P + N
Sbjct: 135 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANX 193
Query: 192 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHD 238
V + + PELL + + S D+W+LGC+ ++ PF G++
Sbjct: 194 FVGTAQYVSPELLTE-KSACKSSDLWALGCIIYQLVAGLPPFRAGNE 239
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 105/241 (43%), Gaps = 43/241 (17%)
Query: 94 NVVKLLDIVRDQHSKTPSLIFEYVNST---DFKVLYPTLTDYDIRYYIYELLKALDYCHS 150
NV+ L D+ ++ LI E V+ DF +L++ + +I ++L ++Y H+
Sbjct: 76 NVITLHDVYENRTDVV--LILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 151 QGIMHRDVKPHNVMI---DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDL 207
+ I H D+KP N+M+ + + ++LID+GLA G E+ + F PE +V+
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPE-IVNY 192
Query: 208 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELD 267
+ DMWS+G + ++ PF G + L I V +Y
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANITSV-------SY--------- 235
Query: 268 PQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQ 327
D H+ S A DF+ KLL + + RLT +EA+ HP+
Sbjct: 236 -DFDEEFFSHT----------------SELAKDFIRKLLVKETRKRLTIQEALRHPWITP 278
Query: 328 V 328
V
Sbjct: 279 V 279
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 64/107 (59%), Gaps = 5/107 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY---NV 191
R+Y E++ AL+Y H +GI+HRD+KP N++++ ++ +++ D+G A+ P + N
Sbjct: 133 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANX 191
Query: 192 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHD 238
V + + PELL + + S D+W+LGC+ ++ PF G++
Sbjct: 192 FVGTAQYVSPELLTE-KSACKSSDLWALGCIIYQLVAGLPPFRAGNE 237
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 64/107 (59%), Gaps = 5/107 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY---NV 191
R+Y E++ AL+Y H +GI+HRD+KP N++++ ++ +++ D+G A+ P + N
Sbjct: 110 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANX 168
Query: 192 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHD 238
V + + PELL + + S D+W+LGC+ ++ PF G++
Sbjct: 169 FVGTAQYVSPELLTE-KSACKSSDLWALGCIIYQLVAGLPPFRAGNE 214
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 64/107 (59%), Gaps = 5/107 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY---NV 191
R+Y E++ AL+Y H +GI+HRD+KP N++++ ++ +++ D+G A+ P + N
Sbjct: 113 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANX 171
Query: 192 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHD 238
V + + PELL + + S D+W+LGC+ ++ PF G++
Sbjct: 172 FVGTAQYVSPELLTE-KSACKSSDLWALGCIIYQLVAGLPPFRAGNE 217
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 97/202 (48%), Gaps = 10/202 (4%)
Query: 39 DYEVVRKVGRGKYSEVFEGINVNTNE----RCXXXXXXXXXXXXXXXXXXXLQNLCGGPN 94
+Y +++ +G+G +++V ++ T + + + + PN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 95 VVKLLDIVRDQHSKTPSLIFEYVNST---DFKVLYPTLTDYDIRYYIYELLKALDYCHSQ 151
+VKL +++ + KT L+ EY + D+ V + + + + R +++ A+ YCH +
Sbjct: 75 IVKLFEVIETE--KTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 152 GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYD 211
I+HRD+K N+++D ++ +++ D+G + + G + + S + PEL +
Sbjct: 133 FIVHRDLKAENLLLDADM-NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDG 191
Query: 212 YSLDMWSLGCMFAGMIFRKEPF 233
+D+WSLG + ++ PF
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPF 213
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 82/142 (57%), Gaps = 11/142 (7%)
Query: 113 IFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQ--GIMHRDVKPHNVMIDHELR 170
+++ + +T+F+ + LT R + ++ AL + + I+H D+KP N+++ + R
Sbjct: 142 LYDLLRNTNFRGVSLNLT----RKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKR 197
Query: 171 -KLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFR 229
++++D+G + G+ + SR+++ PE+L+ + YD ++DMWSLGC+ M
Sbjct: 198 XAIKIVDFGSS--CQLGQRIYQXIQSRFYRSPEVLLGM-PYDLAIDMWSLGCILVEM-HT 253
Query: 230 KEPFFYGHDNHDQLVKIAKVLG 251
EP F G + DQ+ KI +VLG
Sbjct: 254 GEPLFSGANEVDQMNKIVEVLG 275
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 64/107 (59%), Gaps = 5/107 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY---NV 191
R+Y E++ AL+Y H +GI+HRD+KP N++++ ++ +++ D+G A+ P + N
Sbjct: 140 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANX 198
Query: 192 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHD 238
V + + PELL + + S D+W+LGC+ ++ PF G++
Sbjct: 199 FVGTAQYVSPELLTE-KSACKSSDLWALGCIIYQLVAGLPPFRAGNE 244
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 64/107 (59%), Gaps = 5/107 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY---NV 191
R+Y E++ AL+Y H +GI+HRD+KP N++++ ++ +++ D+G A+ P + N
Sbjct: 111 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANX 169
Query: 192 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHD 238
V + + PELL + + S D+W+LGC+ ++ PF G++
Sbjct: 170 FVGTAQYVSPELLTE-KSACKSSDLWALGCIIYQLVAGLPPFRAGNE 215
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 64/107 (59%), Gaps = 5/107 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY---NV 191
R+Y E++ AL+Y H +GI+HRD+KP N++++ ++ +++ D+G A+ P + N
Sbjct: 112 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANX 170
Query: 192 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHD 238
V + + PELL + + S D+W+LGC+ ++ PF G++
Sbjct: 171 FVGTAQYVSPELLTE-KSACKSSDLWALGCIIYQLVAGLPPFRAGNE 216
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 124/297 (41%), Gaps = 46/297 (15%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGGPNVVK 97
D YEV +G G YS I+ TN L+ PN++
Sbjct: 22 DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLR-YGQHPNIIT 80
Query: 98 LLDIVRDQHSKTPSLIFEYVNSTDF--KVLYPTL-TDYDIRYYIYELLKALDYCHSQGIM 154
L D+ D K ++ E + + K+L ++ + ++ + K ++Y H+QG++
Sbjct: 81 LKDVYDD--GKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVV 138
Query: 155 HRDVKPHNVMIDHEL---RKLRLIDWGLAEFYHPGKEYNVRVASRY---FKGPELLVDLQ 208
HRD+KP N++ E +R+ D+G A+ E + + Y F PE+L + Q
Sbjct: 139 HRDLKPSNILYVDESGNPESIRICDFGFAKQLR--AENGLLMTPCYTANFVAPEVL-ERQ 195
Query: 209 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDP 268
YD + D+WSLG + M+ PF G D+ + +I +G+ +
Sbjct: 196 GYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPE--EILARIGSGKF------------- 240
Query: 269 QLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 325
+L G + W+ VS A D + K+L D RLTA + HP+
Sbjct: 241 ---SLSGGY----WNS---------VSDTAKDLVSKMLHVDPHQRLTAALVLRHPWI 281
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 64/107 (59%), Gaps = 5/107 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY---NV 191
R+Y E++ AL+Y H +GI+HRD+KP N++++ ++ +++ D+G A+ P + N
Sbjct: 117 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANX 175
Query: 192 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHD 238
V + + PELL + + S D+W+LGC+ ++ PF G++
Sbjct: 176 FVGTAQYVSPELLTE-KSACKSSDLWALGCIIYQLVAGLPPFRAGNE 221
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 68/125 (54%), Gaps = 19/125 (15%)
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH-------------PG 186
++L+AL Y HSQGI+HRD+KP N+ ID E R +++ D+GLA+ H PG
Sbjct: 124 QILEALSYIHSQGIIHRDLKPMNIFID-ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 187 KEYNVR--VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLV 244
N+ + + + E+L Y+ +DM+SLG +F MI+ PF G + + L
Sbjct: 183 SSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILK 239
Query: 245 KIAKV 249
K+ V
Sbjct: 240 KLRSV 244
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 64/107 (59%), Gaps = 5/107 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY---NV 191
R+Y E++ AL+Y H +GI+HRD+KP N++++ ++ +++ D+G A+ P + N
Sbjct: 132 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANX 190
Query: 192 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHD 238
V + + PELL + + S D+W+LGC+ ++ PF G++
Sbjct: 191 FVGTAQYVSPELLTE-KSACKSSDLWALGCIIYQLVAGLPPFRAGNE 236
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 94/197 (47%), Gaps = 11/197 (5%)
Query: 44 RKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGGPNVVKLLDIVR 103
+ +G G +S + ++ +N+ L+ G PN+VKL ++
Sbjct: 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFH 76
Query: 104 DQ-HSKTPSLIFEYVNSTD-FKVLYPT--LTDYDIRYYIYELLKALDYCHSQGIMHRDVK 159
DQ H+ L+ E +N + F+ + ++ + Y + +L+ A+ + H G++HRD+K
Sbjct: 77 DQLHT---FLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLK 133
Query: 160 PHNVMIDHELRKL--RLIDWGLAEFYHP-GKEYNVRVASRYFKGPELLVDLQDYDYSLDM 216
P N++ E L ++ID+G A P + + ++ PELL + YD S D+
Sbjct: 134 PENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELL-NQNGYDESCDL 192
Query: 217 WSLGCMFAGMIFRKEPF 233
WSLG + M+ + PF
Sbjct: 193 WSLGVILYTMLSGQVPF 209
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 68/125 (54%), Gaps = 19/125 (15%)
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH-------------PG 186
++L+AL Y HSQGI+HRD+KP N+ ID E R +++ D+GLA+ H PG
Sbjct: 124 QILEALSYIHSQGIIHRDLKPMNIFID-ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 187 KEYNVR--VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLV 244
N+ + + + E+L Y+ +DM+SLG +F MI+ PF G + + L
Sbjct: 183 SSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILK 239
Query: 245 KIAKV 249
K+ V
Sbjct: 240 KLRSV 244
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 97/202 (48%), Gaps = 10/202 (4%)
Query: 39 DYEVVRKVGRGKYSEVFEGINVNTNE----RCXXXXXXXXXXXXXXXXXXXLQNLCGGPN 94
+Y +++ +G+G +++V ++ T + + + + PN
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 67
Query: 95 VVKLLDIVRDQHSKTPSLIFEYVNST---DFKVLYPTLTDYDIRYYIYELLKALDYCHSQ 151
+VKL +++ + KT L+ EY + D+ V + + + + R +++ A+ YCH +
Sbjct: 68 IVKLFEVIETE--KTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQK 125
Query: 152 GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYD 211
I+HRD+K N+++D ++ +++ D+G + + G + + S + PEL +
Sbjct: 126 FIVHRDLKAENLLLDADM-NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDG 184
Query: 212 YSLDMWSLGCMFAGMIFRKEPF 233
+D+WSLG + ++ PF
Sbjct: 185 PEVDVWSLGVILYTLVSGSLPF 206
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 64/107 (59%), Gaps = 5/107 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY---NV 191
R+Y E++ AL+Y H +GI+HRD+KP N++++ ++ +++ D+G A+ P + N
Sbjct: 132 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANS 190
Query: 192 RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHD 238
V + + PELL + + S D+W+LGC+ ++ PF G++
Sbjct: 191 FVGTAQYVSPELLTE-KSACKSSDLWALGCIIYQLVAGLPPFRAGNE 236
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 119/297 (40%), Gaps = 51/297 (17%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTN-----ERCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
+D+E+ R +G+GK+ V+ + + +Q+
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYD---IRYYIYELLKALDYCH 149
PN+++L D + LI EY + L+ +D YI EL AL YCH
Sbjct: 73 PNILRLYGYFHD--ATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCH 130
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S+ ++HRD+KP N+++ +L++ D+G + + P + + PE +++ +
Sbjct: 131 SKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPE-MIEGRM 187
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
+D +D+WSLG + + K PF E N Y Y
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPF--------------------EANTYQETYK------ 221
Query: 270 LDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFA 326
R SR +F D V+ A D + +LL+++ R RE + HP+
Sbjct: 222 ------RISR---VEFTFPD---FVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 266
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 105/244 (43%), Gaps = 54/244 (22%)
Query: 99 LDIVRDQHSKTPSLIFEYVN--------STDFKVLYPTLTDYDIRYYIYELLKALDYCHS 150
+D+V+ Q P E +N S DF + I + ++ AL Y H+
Sbjct: 132 MDVVKTQICPCPECNEEAINGSIHGFRESLDF-----VQREKLISNIMRQIFSALHYLHN 186
Query: 151 QGIMHRDVKPHNVMID-HELRKLRLIDWGLA-EFY--HPGKEYNV--RVASRYFKGPELL 204
QGI HRD+KP N + ++ +++L+D+GL+ EFY + G+ Y + + + YF PE+L
Sbjct: 187 QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVL 246
Query: 205 -VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYH 263
+ Y D WS G + ++ PF +D D ++ LNK
Sbjct: 247 NTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVND-------------ADTISQVLNKKL 293
Query: 264 LELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHP 323
+P N +++SP A D L LL + +R A A+ HP
Sbjct: 294 CFENP---------------------NYNVLSPLARDLLSNLLNRNVDERFDAMRALQHP 332
Query: 324 YFAQ 327
+ +Q
Sbjct: 333 WISQ 336
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 71/137 (51%), Gaps = 8/137 (5%)
Query: 112 LIFEYVNSTDFKVLYP---TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 168
+ EYVN D L + R+Y E+ AL+Y H +GI++RD+K NV++D E
Sbjct: 130 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSE 189
Query: 169 LRKLRLIDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMI 227
++L D+G+ E PG + + + PE+L +DY +S+D W+LG + M+
Sbjct: 190 -GHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRG-EDYGFSVDWWALGVLMFEMM 247
Query: 228 FRKEPF--FYGHDNHDQ 242
+ PF DN DQ
Sbjct: 248 AGRSPFDIVGSSDNPDQ 264
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 98/217 (45%), Gaps = 47/217 (21%)
Query: 113 IFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKL 172
+F+Y+ S D L++ + R +++ A+ Y HSQG HRD+KP N++ D E KL
Sbjct: 95 LFDYIISQD------RLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFD-EYHKL 147
Query: 173 RLIDWGLAEFYHPGKEYNVRV--ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRK 230
+LID+GL K+Y+++ S + PEL+ D+WS+G + ++
Sbjct: 148 KLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGF 207
Query: 231 EPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADN 290
PF + D ++ + K + + G++ W
Sbjct: 208 LPF-----DDDNVMALYKKI----------------------MRGKYDVPKW-------- 232
Query: 291 QHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQ 327
+SP +I L ++L+ D + R++ + + HP+ Q
Sbjct: 233 ---LSPSSILLLQQMLQVDPKKRISMKNLLNHPWIMQ 266
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 81/163 (49%), Gaps = 10/163 (6%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNST---DFKVLYPTLTDYDIRYYIYELLKALDYCH 149
PN++ L DI ++ LI E V+ DF +LT+ + ++ ++L + Y H
Sbjct: 75 PNIITLHDIFENKTDVV--LILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLH 132
Query: 150 SQGIMHRDVKPHNVM-IDHEL--RKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 206
S+ I H D+KP N+M +D + +++LID+G+A G E+ + F PE +V+
Sbjct: 133 SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPE-IVN 191
Query: 207 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKV 249
+ DMWS+G + ++ PF G + L I+ V
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPFL-GETKQETLTNISAV 233
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 97/202 (48%), Gaps = 10/202 (4%)
Query: 39 DYEVVRKVGRGKYSEVFEGINVNTNE----RCXXXXXXXXXXXXXXXXXXXLQNLCGGPN 94
+Y +++ +G+G +++V ++ T + + + + PN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 95 VVKLLDIVRDQHSKTPSLIFEYVNST---DFKVLYPTLTDYDIRYYIYELLKALDYCHSQ 151
+VKL +++ + KT L+ EY + D+ V + + + + R +++ A+ YCH +
Sbjct: 75 IVKLFEVIETE--KTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 152 GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYD 211
I+HRD+K N+++D ++ +++ D+G + + G + + + + PEL +
Sbjct: 133 FIVHRDLKAENLLLDADM-NIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDG 191
Query: 212 YSLDMWSLGCMFAGMIFRKEPF 233
+D+WSLG + ++ PF
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPF 213
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 71/137 (51%), Gaps = 8/137 (5%)
Query: 112 LIFEYVNSTDFKVLYP---TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 168
+ EYVN D L + R+Y E+ AL+Y H +GI++RD+K NV++D E
Sbjct: 98 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSE 157
Query: 169 LRKLRLIDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMI 227
++L D+G+ E PG + + + PE+L +DY +S+D W+LG + M+
Sbjct: 158 -GHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRG-EDYGFSVDWWALGVLMFEMM 215
Query: 228 FRKEPF--FYGHDNHDQ 242
+ PF DN DQ
Sbjct: 216 AGRSPFDIVGSSDNPDQ 232
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 127/310 (40%), Gaps = 47/310 (15%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTNER----CXXXXXXXXXXXXXXXXXXXLQNLCGGP 93
++Y++ ++G+G +S V + V + + L P
Sbjct: 11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHP 70
Query: 94 NVVKLLDIVRDQHSKTPSLIFEYVNSTDF---KVLYPTLTDYDIRYYIYELLKALDYCHS 150
N+V+L D + ++ LIF+ V + V ++ D + I ++L+A+ +CH
Sbjct: 71 NIVRLHDSISEEGHHY--LIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQ 128
Query: 151 QGIMHRDVKPHNVMIDHELR--KLRLIDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDL 207
G++HR++KP N+++ +L+ ++L D+GLA E + + + + PE+L
Sbjct: 129 MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRK- 187
Query: 208 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELD 267
Y +D+W+ G + ++ P F+ D H L
Sbjct: 188 DPYGKPVDLWACGVILY-ILLVGYPPFWDEDQH------------------------RLY 222
Query: 268 PQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQ 327
Q+ A W V+PEA D ++K+L + R+TA EA+ HP+ +
Sbjct: 223 QQIKAGAYDFPSPEWDT---------VTPEAKDLINKMLTINPSKRITAAEALKHPWISH 273
Query: 328 VRAAESSRTR 337
S R
Sbjct: 274 RSTVASCMHR 283
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 126/297 (42%), Gaps = 46/297 (15%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTN-ERCXXXXXXXXXXXXXXXXXXXLQNLCGG---P 93
D+Y+V ++G+G +S V ++ T E +C P
Sbjct: 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP 65
Query: 94 NVVKLLDIVRDQHSKTPSLIFEYVNSTDF---KVLYPTLTDYDIRYYIYELLKALDYCHS 150
N+V+L D ++++ L+F+ V + V ++ D + I ++L+++ YCHS
Sbjct: 66 NIVRLHDSIQEESFHY--LVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 123
Query: 151 QGIMHRDVKPHNVMIDHELR--KLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 208
GI+HR++KP N+++ + + ++L D+GLA + + ++ + + PE+L
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKK-D 182
Query: 209 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDP 268
Y +D+W+ G + ++ P F+ D H L
Sbjct: 183 PYSKPVDIWACGVILY-ILLVGYPPFWDEDQH------------------------RLYA 217
Query: 269 QLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 325
Q+ A + W V+PEA +D +L + + R+TA +A+ P+
Sbjct: 218 QIKAGAYDYPSPEWDT---------VTPEAKSLIDSMLTVNPKKRITADQALKVPWI 265
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 126/297 (42%), Gaps = 46/297 (15%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTN-ERCXXXXXXXXXXXXXXXXXXXLQNLCGG---P 93
D+Y+V ++G+G +S V ++ T E +C P
Sbjct: 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP 65
Query: 94 NVVKLLDIVRDQHSKTPSLIFEYVNSTDF---KVLYPTLTDYDIRYYIYELLKALDYCHS 150
N+V+L D ++++ L+F+ V + V ++ D + I ++L+++ YCHS
Sbjct: 66 NIVRLHDSIQEESFHY--LVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 123
Query: 151 QGIMHRDVKPHNVMIDHELR--KLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 208
GI+HR++KP N+++ + + ++L D+GLA + + ++ + + PE+L
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKK-D 182
Query: 209 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDP 268
Y +D+W+ G + ++ P F+ D H L
Sbjct: 183 PYSKPVDIWACGVILYILLVGYPP-FWDEDQH------------------------RLYA 217
Query: 269 QLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 325
Q+ A + W V+PEA +D +L + + R+TA +A+ P+
Sbjct: 218 QIKAGAYDYPSPEWDT---------VTPEAKSLIDSMLTVNPKKRITADQALKVPWI 265
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 126/297 (42%), Gaps = 46/297 (15%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTN-ERCXXXXXXXXXXXXXXXXXXXLQNLCGG---P 93
D+Y+V ++G+G +S V ++ T E +C P
Sbjct: 5 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP 64
Query: 94 NVVKLLDIVRDQHSKTPSLIFEYVNSTDF---KVLYPTLTDYDIRYYIYELLKALDYCHS 150
N+V+L D ++++ L+F+ V + V ++ D + I ++L+++ YCHS
Sbjct: 65 NIVRLHDSIQEESFHY--LVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 122
Query: 151 QGIMHRDVKPHNVMIDHELR--KLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 208
GI+HR++KP N+++ + + ++L D+GLA + + ++ + + PE+L
Sbjct: 123 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVL-KKD 181
Query: 209 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDP 268
Y +D+W+ G + ++ P F+ D H L
Sbjct: 182 PYSKPVDIWACGVILYILLVGYPP-FWDEDQH------------------------RLYA 216
Query: 269 QLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 325
Q+ A + W V+PEA +D +L + + R+TA +A+ P+
Sbjct: 217 QIKAGAYDYPSPEWDT---------VTPEAKSLIDSMLTVNPKKRITADQALKVPWI 264
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 71/137 (51%), Gaps = 8/137 (5%)
Query: 112 LIFEYVNSTDFKVLYP---TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 168
+ EYVN D L + R+Y E+ AL+Y H +GI++RD+K NV++D E
Sbjct: 83 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSE 142
Query: 169 LRKLRLIDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMI 227
++L D+G+ E PG + + + PE+L +DY +S+D W+LG + M+
Sbjct: 143 -GHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRG-EDYGFSVDWWALGVLMFEMM 200
Query: 228 FRKEPF--FYGHDNHDQ 242
+ PF DN DQ
Sbjct: 201 AGRSPFDIVGSSDNPDQ 217
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 89/203 (43%), Gaps = 46/203 (22%)
Query: 136 YYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA-EFYHPGKEYNVRVA 194
+Y+ E+ AL + H +GI++RD+KP N+M++H+ ++L D+GL E H G +
Sbjct: 125 FYLAEISMALGHLHQKGIIYRDLKPENIMLNHQ-GHVKLTDFGLCKESIHDGTVTHTFCG 183
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDE 254
+ + PE+L+ ++ ++D WSLG + M+ P F G + + KI K
Sbjct: 184 TIEYMAPEILMR-SGHNRAVDWWSLGALMYDMLTGAPP-FTGENRKKTIDKILKC----- 236
Query: 255 LNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRL 314
L L P L + EA D L KLL+ + RL
Sbjct: 237 --------KLNLPPYL------------------------TQEARDLLKKLLKRNAASRL 264
Query: 315 T-----AREAMAHPYFAQVRAAE 332
A E AHP+F + E
Sbjct: 265 GAGPGDAGEVQAHPFFRHINWEE 287
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 119/297 (40%), Gaps = 51/297 (17%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTN-----ERCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
+D+E+ R +G+GK+ V+ + + +Q+
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYD---IRYYIYELLKALDYCH 149
PN+++L D + LI EY + L+ +D YI EL AL YCH
Sbjct: 73 PNILRLYGYFHD--ATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCH 130
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S+ ++HRD+KP N+++ +L++ D+G + + P + + PE +++ +
Sbjct: 131 SKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRXXLXGTLDYLPPE-MIEGRM 187
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
+D +D+WSLG + + K PF E N Y Y
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPF--------------------EANTYQETYK------ 221
Query: 270 LDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFA 326
R SR +F D V+ A D + +LL+++ R RE + HP+
Sbjct: 222 ------RISR---VEFTFPD---FVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 266
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 125/300 (41%), Gaps = 49/300 (16%)
Query: 37 QDDYEVVRKVGRGKYSEVFEGINVNTNE----RCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
+D Y+ +G G +SEV + T + +C L +
Sbjct: 17 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKI-KH 75
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNST---DFKVLYPTLTDYDIRYYIYELLKALDYCH 149
PN+V L DI + LI + V+ D V T+ D I+++L A+ Y H
Sbjct: 76 PNIVALDDIY--ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLH 133
Query: 150 SQGIMHRDVKPHNVM---IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 206
GI+HRD+KP N++ +D + K+ + D+GL++ PG + + + PE+L
Sbjct: 134 DLGIVHRDLKPENLLYYSLDED-SKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQ 192
Query: 207 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLEL 266
+ Y ++D WS+G + ++ PF+ DE +A L + L+
Sbjct: 193 -KPYSKAVDCWSIGVIAYILLCGYPPFY------------------DENDAKLFEQILKA 233
Query: 267 DPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFA 326
+ + D+ W +S A DF+ L+ D + R T +A+ HP+ A
Sbjct: 234 EYEFDSPY-------WDD---------ISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIA 277
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 108/243 (44%), Gaps = 50/243 (20%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDF------KVLYPTLTDYDIRYYIYELLKALD 146
PN+V L DI + LI + V+ + K Y T+ D I+++L A+
Sbjct: 76 PNIVALDDIY--ESGGHLYLIMQLVSGGELFDRIVEKGFY---TERDASRLIFQVLDAVK 130
Query: 147 YCHSQGIMHRDVKPHNVM---IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 203
Y H GI+HRD+KP N++ +D E K+ + D+GL++ PG + + + PE+
Sbjct: 131 YLHDLGIVHRDLKPENLLYYSLD-EDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEV 189
Query: 204 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYH 263
L + Y ++D WS+G + ++ PF+ DE +A L +
Sbjct: 190 LAQ-KPYSKAVDCWSIGVIAYILLCGYPPFY------------------DENDAKLFEQI 230
Query: 264 LELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHP 323
L+ + + D+ W +S A DF+ L+ D + R T +A+ HP
Sbjct: 231 LKAEYEFDSPY-------WDD---------ISDSAKDFIRHLMEKDPEKRFTCEQALQHP 274
Query: 324 YFA 326
+ A
Sbjct: 275 WIA 277
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 126/297 (42%), Gaps = 46/297 (15%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTN-ERCXXXXXXXXXXXXXXXXXXXLQNLCGG---P 93
D+Y+V ++G+G +S V ++ T E +C P
Sbjct: 29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP 88
Query: 94 NVVKLLDIVRDQHSKTPSLIFEYVNSTDF---KVLYPTLTDYDIRYYIYELLKALDYCHS 150
N+V+L D ++++ L+F+ V + V ++ D + I ++L+++ YCHS
Sbjct: 89 NIVRLHDSIQEESFHY--LVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 146
Query: 151 QGIMHRDVKPHNVMIDHELR--KLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 208
GI+HR++KP N+++ + + ++L D+GLA + + ++ + + PE+L
Sbjct: 147 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKK-D 205
Query: 209 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDP 268
Y +D+W+ G + ++ P F+ D H L
Sbjct: 206 PYSKPVDIWACGVILY-ILLVGYPPFWDEDQH------------------------RLYA 240
Query: 269 QLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 325
Q+ A + W V+PEA +D +L + + R+TA +A+ P+
Sbjct: 241 QIKAGAYDYPSPEWD---------TVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 288
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 68/123 (55%), Gaps = 6/123 (4%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE--FYHPG 186
T+ D+++Y+ EL LD+ HS GI++RD+KP N+++D E ++L D+GL++ H
Sbjct: 127 FTEEDVKFYLAELALGLDHLHSLGIIYRDLKPENILLDEE-GHIKLTDFGLSKEAIDHEK 185
Query: 187 KEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKI 246
K Y+ Y PE +V+ Q + +S D WS G + M+ P F G D + + I
Sbjct: 186 KAYSFCGTVEYM-APE-VVNRQGHSHSADWWSYGVLMFEMLTGSLP-FQGKDRKETMTLI 242
Query: 247 AKV 249
K
Sbjct: 243 LKA 245
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 71/137 (51%), Gaps = 8/137 (5%)
Query: 112 LIFEYVNSTDFKVLYP---TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 168
+ EYVN D L + R+Y E+ AL+Y H +GI++RD+K NV++D E
Sbjct: 87 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSE 146
Query: 169 LRKLRLIDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMI 227
++L D+G+ E PG + + + PE+L +DY +S+D W+LG + M+
Sbjct: 147 -GHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRG-EDYGFSVDWWALGVLMFEMM 204
Query: 228 FRKEPF--FYGHDNHDQ 242
+ PF DN DQ
Sbjct: 205 AGRSPFDIVGSSDNPDQ 221
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 125/300 (41%), Gaps = 49/300 (16%)
Query: 37 QDDYEVVRKVGRGKYSEVFEGINVNTNE----RCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
+D Y+ +G G +SEV + T + +C L +
Sbjct: 17 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKI-KH 75
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNST---DFKVLYPTLTDYDIRYYIYELLKALDYCH 149
PN+V L DI + LI + V+ D V T+ D I+++L A+ Y H
Sbjct: 76 PNIVALDDIY--ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLH 133
Query: 150 SQGIMHRDVKPHNVM---IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 206
GI+HRD+KP N++ +D + K+ + D+GL++ PG + + + PE+L
Sbjct: 134 DLGIVHRDLKPENLLYYSLDED-SKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQ 192
Query: 207 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLEL 266
+ Y ++D WS+G + ++ PF+ DE +A L + L+
Sbjct: 193 -KPYSKAVDCWSIGVIAYILLCGYPPFY------------------DENDAKLFEQILKA 233
Query: 267 DPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFA 326
+ + D+ W +S A DF+ L+ D + R T +A+ HP+ A
Sbjct: 234 EYEFDSPY-------WDD---------ISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIA 277
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 107/240 (44%), Gaps = 44/240 (18%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNST---DFKVLYPTLTDYDIRYYIYELLKALDYCH 149
PN+V L DI + LI + V+ D V T+ D I+++L A+ Y H
Sbjct: 76 PNIVALDDIY--ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLH 133
Query: 150 SQGIMHRDVKPHNVM---IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 206
GI+HRD+KP N++ +D + K+ + D+GL++ PG + + + PE+L
Sbjct: 134 DLGIVHRDLKPENLLYYSLDED-SKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQ 192
Query: 207 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLEL 266
+ Y ++D WS+G + ++ PF+ DE +A L + L+
Sbjct: 193 -KPYSKAVDCWSIGVIAYILLCGYPPFY------------------DENDAKLFEQILKA 233
Query: 267 DPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFA 326
+ + D+ W +S A DF+ L+ D + R T +A+ HP+ A
Sbjct: 234 EYEFDSPY-------WDD---------ISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIA 277
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 118/297 (39%), Gaps = 51/297 (17%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTN-----ERCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
+D+E+ R +G+GK+ V+ + + +Q+
Sbjct: 12 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 71
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYD---IRYYIYELLKALDYCH 149
PN+++L D + LI EY L+ +D YI EL AL YCH
Sbjct: 72 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 129
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S+ ++HRD+KP N+++ +L++ D+G + + P + + PE +++ +
Sbjct: 130 SKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPE-MIEGRM 186
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
+D +D+WSLG + + K PF E N Y Y
Sbjct: 187 HDEKVDLWSLGVLCYEFLVGKPPF--------------------EANTYQETYK------ 220
Query: 270 LDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFA 326
R SR +F D V+ A D + +LL+++ R RE + HP+
Sbjct: 221 ------RISR---VEFTFPD---FVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 265
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 75/146 (51%), Gaps = 11/146 (7%)
Query: 93 PNVVKLLDIVRDQHSKTPS---LIFEYVNST--DFKVLYPTLTDYDIRYYIYELLKALDY 147
P+++KL D++ TP+ ++ EY D+ V +T+ + R + +++ A++Y
Sbjct: 69 PHIIKLYDVI-----TTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEY 123
Query: 148 CHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDL 207
CH I+HRD+KP N+++D L +++ D+GL+ G S + PE++
Sbjct: 124 CHRHKIVHRDLKPENLLLDDNL-NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGK 182
Query: 208 QDYDYSLDMWSLGCMFAGMIFRKEPF 233
+D+WS G + M+ + PF
Sbjct: 183 LYAGPEVDVWSCGIVLYVMLVGRLPF 208
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 68/123 (55%), Gaps = 6/123 (4%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE--FYHPG 186
T+ D+++Y+ EL ALD+ HS GI++RD+KP N+++D E ++L D+GL++ H
Sbjct: 123 FTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEE-GHIKLTDFGLSKESIDHEK 181
Query: 187 KEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKI 246
K Y+ Y PE +V+ + + S D WS G + M+ P F G D + + I
Sbjct: 182 KAYSFCGTVEYM-APE-VVNRRGHTQSADWWSFGVLMFEMLTGTLP-FQGKDRKETMTMI 238
Query: 247 AKV 249
K
Sbjct: 239 LKA 241
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 119/297 (40%), Gaps = 51/297 (17%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTN-----ERCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
+D+E+ R +G+GK+ V+ + + +Q+
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYD---IRYYIYELLKALDYCH 149
PN+++L D + LI EY L+ +D YI EL AL YCH
Sbjct: 69 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S+ ++HRD+KP N+++ +L++ D+G + + P + + + PE +++ +
Sbjct: 127 SKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRDTLCGTLDYLPPE-MIEGRM 183
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
+D +D+WSLG + + K PF E N Y Y
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPF--------------------EANTYQETYK------ 217
Query: 270 LDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFA 326
R SR +F D V+ A D + +LL+++ R RE + HP+
Sbjct: 218 ------RISR---VEFTFPD---FVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 262
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 118/297 (39%), Gaps = 51/297 (17%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTN-----ERCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
+D+E+ R +G+GK+ V+ + + +Q+
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYD---IRYYIYELLKALDYCH 149
PN+++L D + LI EY L+ +D YI EL AL YCH
Sbjct: 73 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S+ ++HRD+KP N+++ +L++ D+G + + P + + PE +++ +
Sbjct: 131 SKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPE-MIEGRM 187
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
+D +D+WSLG + + K PF E N Y Y
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPF--------------------EANTYQETYK------ 221
Query: 270 LDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFA 326
R SR +F D V+ A D + +LL+++ R RE + HP+
Sbjct: 222 ------RISR---VEFTFPD---FVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 266
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 109/257 (42%), Gaps = 59/257 (22%)
Query: 86 LQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNST---DFKVLYPTLTDYDIRYYIYELL 142
L+ + G PN+++L D + + L+F+ + D+ TL++ + R + LL
Sbjct: 77 LRKVSGHPNIIQLKDTY--ETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALL 134
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 202
+ + H I+HRD+KP N+++D ++ ++L D+G + PG++ + + PE
Sbjct: 135 EVICALHKLNIVHRDLKPENILLDDDM-NIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPE 193
Query: 203 LL-VDLQD----YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNA 257
++ + D Y +DMWS G + ++ PF++ Q++ +
Sbjct: 194 IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH----RKQMLML----------- 238
Query: 258 YLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLD-------KLLRYDH 310
+ I + N SPE D+ D + L
Sbjct: 239 --------------------------RMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQP 272
Query: 311 QDRLTAREAMAHPYFAQ 327
Q R TA EA+AHP+F Q
Sbjct: 273 QKRYTAEEALAHPFFQQ 289
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 68/122 (55%), Gaps = 6/122 (4%)
Query: 130 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE--FYHPGK 187
T+ D+++Y+ EL ALD+ HS GI++RD+KP N+++D E ++L D+GL++ H K
Sbjct: 125 TEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEE-GHIKLTDFGLSKESIDHEKK 183
Query: 188 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 247
Y+ Y PE +V+ + + S D WS G + M+ P F G D + + I
Sbjct: 184 AYSFCGTVEYM-APE-VVNRRGHTQSADWWSFGVLMFEMLTGTLP-FQGKDRKETMTMIL 240
Query: 248 KV 249
K
Sbjct: 241 KA 242
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 118/297 (39%), Gaps = 51/297 (17%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTN-----ERCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
+D+E+ R +G+GK+ V+ + + +Q+
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYD---IRYYIYELLKALDYCH 149
PN+++L D + LI EY L+ +D YI EL AL YCH
Sbjct: 68 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S+ ++HRD+KP N+++ +L++ D+G + + P + + PE +++ +
Sbjct: 126 SKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPE-MIEGRM 182
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
+D +D+WSLG + + K PF E N Y Y
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPF--------------------EANTYQETYK------ 216
Query: 270 LDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFA 326
R SR +F D V+ A D + +LL+++ R RE + HP+
Sbjct: 217 ------RISR---VEFTFPD---FVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 261
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 96/211 (45%), Gaps = 21/211 (9%)
Query: 39 DYEVVRKVGRGKYSEVF------EGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
++ + +K+GRG++SEV+ +G+ V + L+ L
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL-NH 91
Query: 93 PNVVKL-LDIVRDQHSKTPSLIFEYVNSTD-------FKVLYPTLTDYDIRYYIYELLKA 144
PNV+K + D +++ E ++ D FK + + + Y +L A
Sbjct: 92 PNVIKYYASFIEDNEL---NIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSA 148
Query: 145 LDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP-GKEYNVRVASRYFKGPEL 203
L++ HS+ +MHRD+KP NV I ++L D GL F+ + V + Y+ PE
Sbjct: 149 LEHMHSRRVMHRDIKPANVFIT-ATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPER 207
Query: 204 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 234
+ + Y++ D+WSLGC+ M + PF+
Sbjct: 208 IHE-NGYNFKSDIWSLGCLLYEMAALQSPFY 237
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 68/122 (55%), Gaps = 6/122 (4%)
Query: 130 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE--FYHPGK 187
T+ D+++Y+ EL ALD+ HS GI++RD+KP N+++D E ++L D+GL++ H K
Sbjct: 124 TEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEE-GHIKLTDFGLSKESIDHEKK 182
Query: 188 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 247
Y+ Y PE +V+ + + S D WS G + M+ P F G D + + I
Sbjct: 183 AYSFCGTVEYM-APE-VVNRRGHTQSADWWSFGVLMFEMLTGTLP-FQGKDRKETMTMIL 239
Query: 248 KV 249
K
Sbjct: 240 KA 241
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 118/297 (39%), Gaps = 51/297 (17%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTN-----ERCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
+D+E+ R +G+GK+ V+ + + +Q+
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYD---IRYYIYELLKALDYCH 149
PN+++L D + LI EY L+ +D YI EL AL YCH
Sbjct: 71 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S+ ++HRD+KP N+++ +L++ D+G + + P + + PE +++ +
Sbjct: 129 SKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPE-MIEGRM 185
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
+D +D+WSLG + + K PF E N Y Y
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPF--------------------EANTYQETYK------ 219
Query: 270 LDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFA 326
R SR +F D V+ A D + +LL+++ R RE + HP+
Sbjct: 220 ------RISR---VEFTFPD---FVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 264
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 118/297 (39%), Gaps = 51/297 (17%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTN-----ERCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
+D+E+ R +G+GK+ V+ + + +Q+
Sbjct: 7 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 66
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYD---IRYYIYELLKALDYCH 149
PN+++L D + LI EY L+ +D YI EL AL YCH
Sbjct: 67 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 124
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S+ ++HRD+KP N+++ +L++ D+G + + P + + PE +++ +
Sbjct: 125 SKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPE-MIEGRM 181
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
+D +D+WSLG + + K PF E N Y Y
Sbjct: 182 HDEKVDLWSLGVLCYEFLVGKPPF--------------------EANTYQETYK------ 215
Query: 270 LDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFA 326
R SR +F D V+ A D + +LL+++ R RE + HP+
Sbjct: 216 ------RISR---VEFTFPD---FVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 260
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 118/297 (39%), Gaps = 51/297 (17%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTN-----ERCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
+D+E+ R +G+GK+ V+ + + +Q+
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYD---IRYYIYELLKALDYCH 149
PN+++L D + LI EY L+ +D YI EL AL YCH
Sbjct: 71 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S+ ++HRD+KP N+++ +L++ D+G + + P + + PE +++ +
Sbjct: 129 SKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPE-MIEGRM 185
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
+D +D+WSLG + + K PF E N Y Y
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPF--------------------EANTYQETYK------ 219
Query: 270 LDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFA 326
R SR +F D V+ A D + +LL+++ R RE + HP+
Sbjct: 220 ------RISR---VEFTFPD---FVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 264
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 109/257 (42%), Gaps = 59/257 (22%)
Query: 86 LQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNST---DFKVLYPTLTDYDIRYYIYELL 142
L+ + G PN+++L D + + L+F+ + D+ TL++ + R + LL
Sbjct: 64 LRKVSGHPNIIQLKDTY--ETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALL 121
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 202
+ + H I+HRD+KP N+++D ++ ++L D+G + PG++ + + PE
Sbjct: 122 EVICALHKLNIVHRDLKPENILLDDDM-NIKLTDFGFSCQLDPGEKLREVCGTPSYLAPE 180
Query: 203 LL-VDLQD----YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNA 257
++ + D Y +DMWS G + ++ PF++ Q++ +
Sbjct: 181 IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH----RKQMLML----------- 225
Query: 258 YLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLD-------KLLRYDH 310
+ I + N SPE D+ D + L
Sbjct: 226 --------------------------RMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQP 259
Query: 311 QDRLTAREAMAHPYFAQ 327
Q R TA EA+AHP+F Q
Sbjct: 260 QKRYTAEEALAHPFFQQ 276
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 89/203 (43%), Gaps = 46/203 (22%)
Query: 136 YYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA-EFYHPGKEYNVRVA 194
+Y+ E+ AL + H +GI++RD+KP N+M++H+ ++L D+GL E H G +
Sbjct: 125 FYLAEISMALGHLHQKGIIYRDLKPENIMLNHQ-GHVKLTDFGLCKESIHDGTVTHXFCG 183
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDE 254
+ + PE+L+ ++ ++D WSLG + M+ P F G + + KI K
Sbjct: 184 TIEYMAPEILMR-SGHNRAVDWWSLGALMYDMLTGAPP-FTGENRKKTIDKILKC----- 236
Query: 255 LNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRL 314
L L P L + EA D L KLL+ + RL
Sbjct: 237 --------KLNLPPYL------------------------TQEARDLLKKLLKRNAASRL 264
Query: 315 T-----AREAMAHPYFAQVRAAE 332
A E AHP+F + E
Sbjct: 265 GAGPGDAGEVQAHPFFRHINWEE 287
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 109/257 (42%), Gaps = 59/257 (22%)
Query: 86 LQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNST---DFKVLYPTLTDYDIRYYIYELL 142
L+ + G PN+++L D + + L+F+ + D+ TL++ + R + LL
Sbjct: 77 LRKVSGHPNIIQLKDTY--ETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALL 134
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 202
+ + H I+HRD+KP N+++D ++ ++L D+G + PG++ + + PE
Sbjct: 135 EVICALHKLNIVHRDLKPENILLDDDM-NIKLTDFGFSCQLDPGEKLREVCGTPSYLAPE 193
Query: 203 LL-VDLQD----YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNA 257
++ + D Y +DMWS G + ++ PF++ Q++ +
Sbjct: 194 IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH----RKQMLML----------- 238
Query: 258 YLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLD-------KLLRYDH 310
+ I + N SPE D+ D + L
Sbjct: 239 --------------------------RMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQP 272
Query: 311 QDRLTAREAMAHPYFAQ 327
Q R TA EA+AHP+F Q
Sbjct: 273 QKRYTAEEALAHPFFQQ 289
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 37/201 (18%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLAEFYHPG 186
L + + Y Y++L A+ Y H GI+HRD+KP NV++ + +++ D+G ++
Sbjct: 111 LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 170
Query: 187 KEYNVRVASRYFKGPELLVDL--QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLV 244
+ + PE+LV + Y+ ++D WSLG + + P F H L
Sbjct: 171 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF-ICLSGYPPFSEHRTQVSL- 228
Query: 245 KIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDK 304
D++ + KY+ P++ W++ VS +A+D + K
Sbjct: 229 -------KDQITS--GKYN--FIPEV-----------WAE---------VSEKALDLVKK 257
Query: 305 LLRYDHQDRLTAREAMAHPYF 325
LL D + R T EA+ HP+
Sbjct: 258 LLVVDPKARFTTEEALRHPWL 278
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 117/297 (39%), Gaps = 51/297 (17%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTN-----ERCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
+D+E+ R +G+GK+ V+ + + +Q+
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYD---IRYYIYELLKALDYCH 149
PN+++L D + LI EY L+ +D YI EL AL YCH
Sbjct: 73 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S+ ++HRD+KP N+++ +L++ D+G + + P + + PE ++ +
Sbjct: 131 SKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPE-XIEGRX 187
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
+D +D+WSLG + + K PF E N Y Y
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPF--------------------EANTYQETYK------ 221
Query: 270 LDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFA 326
R SR +F D V+ A D + +LL+++ R RE + HP+
Sbjct: 222 ------RISR---VEFTFPD---FVTEGARDLISRLLKHNPSQRPXLREVLEHPWIT 266
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 37/201 (18%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLAEFYHPG 186
L + + Y Y++L A+ Y H GI+HRD+KP NV++ + +++ D+G ++
Sbjct: 111 LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 170
Query: 187 KEYNVRVASRYFKGPELLVDL--QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLV 244
+ + PE+LV + Y+ ++D WSLG + + P F H L
Sbjct: 171 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF-ICLSGYPPFSEHRTQVSL- 228
Query: 245 KIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDK 304
D++ + KY+ P++ W++ VS +A+D + K
Sbjct: 229 -------KDQITS--GKYN--FIPEV-----------WAE---------VSEKALDLVKK 257
Query: 305 LLRYDHQDRLTAREAMAHPYF 325
LL D + R T EA+ HP+
Sbjct: 258 LLVVDPKARFTTEEALRHPWL 278
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 118/297 (39%), Gaps = 51/297 (17%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTN-----ERCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
+D+E+ R +G+GK+ V+ + + +Q+
Sbjct: 25 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 84
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYD---IRYYIYELLKALDYCH 149
PN+++L D + LI EY L+ +D YI EL AL YCH
Sbjct: 85 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 142
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S+ ++HRD+KP N+++ +L++ D+G + + P + + PE +++ +
Sbjct: 143 SKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPE-MIEGRM 199
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
+D +D+WSLG + + K PF E N Y Y
Sbjct: 200 HDEKVDLWSLGVLCYEFLVGKPPF--------------------EANTYQETYK------ 233
Query: 270 LDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFA 326
R SR +F D V+ A D + +LL+++ R RE + HP+
Sbjct: 234 ------RISR---VEFTFPD---FVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 278
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 122/298 (40%), Gaps = 53/298 (17%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTN-----ERCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
+D+E+ R +G+GK+ V+ + + +Q+
Sbjct: 34 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 93
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVN-STDFKVLYPTLTDYD---IRYYIYELLKALDYC 148
PN+++L D + LI EY T ++ L L+ +D YI EL AL YC
Sbjct: 94 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITELANALSYC 150
Query: 149 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 208
HS+ ++HRD+KP N+++ +L++ D+G + + P + + PE +++ +
Sbjct: 151 HSKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPE-MIEGR 207
Query: 209 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDP 268
+D +D+WSLG + + K PF E N Y Y
Sbjct: 208 MHDEKVDLWSLGVLCYEFLVGKPPF--------------------EANTYQETYK----- 242
Query: 269 QLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFA 326
R SR +F D V+ A D + +LL+++ R RE + HP+
Sbjct: 243 -------RISR---VEFTFPD---FVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 287
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 118/297 (39%), Gaps = 51/297 (17%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTN-----ERCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
+D+E+ R +G+GK+ V+ + + +Q+
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYD---IRYYIYELLKALDYCH 149
PN+++L D + LI EY L+ +D YI EL AL YCH
Sbjct: 71 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S+ ++HRD+KP N+++ +L++ D+G + + P + + PE +++ +
Sbjct: 129 SKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRAALCGTLDYLPPE-MIEGRM 185
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
+D +D+WSLG + + K PF E N Y Y
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPF--------------------EANTYQETYK------ 219
Query: 270 LDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFA 326
R SR +F D V+ A D + +LL+++ R RE + HP+
Sbjct: 220 ------RISR---VEFTFPD---FVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 264
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 118/297 (39%), Gaps = 51/297 (17%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTN-----ERCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
+D+E+ R +G+GK+ V+ + + +Q+
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYD---IRYYIYELLKALDYCH 149
PN+++L D + LI EY L+ +D YI EL AL YCH
Sbjct: 68 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S+ ++HRD+KP N+++ +L++ D+G + + P + + PE +++ +
Sbjct: 126 SKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTXLCGTLDYLPPE-MIEGRM 182
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
+D +D+WSLG + + K PF E N Y Y
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPF--------------------EANTYQETYK------ 216
Query: 270 LDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFA 326
R SR +F D V+ A D + +LL+++ R RE + HP+
Sbjct: 217 ------RISR---VEFTFPD---FVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 261
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 37/201 (18%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLAEFYHPG 186
L + + Y Y++L A+ Y H GI+HRD+KP NV++ + +++ D+G ++
Sbjct: 111 LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 170
Query: 187 KEYNVRVASRYFKGPELLVDL--QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLV 244
+ + PE+LV + Y+ ++D WSLG + + P F H L
Sbjct: 171 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF-ICLSGYPPFSEHRTQVSL- 228
Query: 245 KIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDK 304
D++ + KY+ P++ W++ VS +A+D + K
Sbjct: 229 -------KDQITS--GKYN--FIPEV-----------WAE---------VSEKALDLVKK 257
Query: 305 LLRYDHQDRLTAREAMAHPYF 325
LL D + R T EA+ HP+
Sbjct: 258 LLVVDPKARFTTEEALRHPWL 278
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 37/201 (18%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLAEFYHPG 186
L + + Y Y++L A+ Y H GI+HRD+KP NV++ + +++ D+G ++
Sbjct: 110 LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 169
Query: 187 KEYNVRVASRYFKGPELLVDL--QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLV 244
+ + PE+LV + Y+ ++D WSLG + + P F H L
Sbjct: 170 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF-ICLSGYPPFSEHRTQVSL- 227
Query: 245 KIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDK 304
D++ + KY+ P++ W++ VS +A+D + K
Sbjct: 228 -------KDQITS--GKYN--FIPEV-----------WAE---------VSEKALDLVKK 256
Query: 305 LLRYDHQDRLTAREAMAHPYF 325
LL D + R T EA+ HP+
Sbjct: 257 LLVVDPKARFTTEEALRHPWL 277
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 118/297 (39%), Gaps = 51/297 (17%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTN-----ERCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
+D+E+ R +G+GK+ V+ + + +Q+
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYD---IRYYIYELLKALDYCH 149
PN+++L D + LI EY L+ +D YI EL AL YCH
Sbjct: 68 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S+ ++HRD+KP N+++ +L++ D+G + + P + + PE +++ +
Sbjct: 126 SKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRAALCGTLDYLPPE-MIEGRM 182
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
+D +D+WSLG + + K PF E N Y Y
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPF--------------------EANTYQETYK------ 216
Query: 270 LDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFA 326
R SR +F D V+ A D + +LL+++ R RE + HP+
Sbjct: 217 ------RISR---VEFTFPD---FVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 261
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 37/201 (18%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLAEFYHPG 186
L + + Y Y++L A+ Y H GI+HRD+KP NV++ + +++ D+G ++
Sbjct: 117 LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 176
Query: 187 KEYNVRVASRYFKGPELLVDL--QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLV 244
+ + PE+LV + Y+ ++D WSLG + + P F H L
Sbjct: 177 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF-ICLSGYPPFSEHRTQVSL- 234
Query: 245 KIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDK 304
D++ + KY+ P++ W++ VS +A+D + K
Sbjct: 235 -------KDQITS--GKYN--FIPEV-----------WAE---------VSEKALDLVKK 263
Query: 305 LLRYDHQDRLTAREAMAHPYF 325
LL D + R T EA+ HP+
Sbjct: 264 LLVVDPKARFTTEEALRHPWL 284
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 95/205 (46%), Gaps = 41/205 (20%)
Query: 130 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA-EFYHPGKE 188
++ + R+++++++ + Y HS GI+HRD+ N+++ + +++ D+GLA + P ++
Sbjct: 110 SENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNM-NIKIADFGLATQLKMPHEK 168
Query: 189 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
+ + + PE+ + D+WSLGCMF ++ + PF
Sbjct: 169 HYTLCGTPNYISPEIATR-SAHGLESDVWSLGCMFYTLLIGRPPF--------------- 212
Query: 249 VLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRY 308
TD + LNK L D ++ + +S EA D + +LLR
Sbjct: 213 --DTDTVKNTLNKVVLA-DYEMPS--------------------FLSIEAKDLIHQLLRR 249
Query: 309 DHQDRLTAREAMAHPYFAQVRAAES 333
+ DRL+ + HP+ ++ + +S
Sbjct: 250 NPADRLSLSSVLDHPFMSRNSSTKS 274
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 117/297 (39%), Gaps = 51/297 (17%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTN-----ERCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
+D+E+ R +G+GK+ V+ + +Q+
Sbjct: 5 EDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 64
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYD---IRYYIYELLKALDYCH 149
PN+++L D + LI EY L+ +D YI EL AL YCH
Sbjct: 65 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 122
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S+ ++HRD+KP N+++ +L++ D+G + + P + + PE +++ +
Sbjct: 123 SKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPE-MIEGRM 179
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
+D +D+WSLG + + K PF E N Y Y
Sbjct: 180 HDEKVDLWSLGVLCYEFLVGKPPF--------------------EANTYQETYK------ 213
Query: 270 LDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFA 326
R SR +F D V+ A D + +LL+++ R RE + HP+
Sbjct: 214 ------RISR---VEFTFPD---FVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 258
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 88/201 (43%), Gaps = 37/201 (18%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLAEFYHPG 186
L + + Y Y++L A+ Y H GI+HRD+KP NV++ + +++ D+G ++
Sbjct: 250 LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 309
Query: 187 KEYNVRVASRYFKGPELLVDL--QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLV 244
+ + PE+LV + Y+ ++D WSLG + + PF H V
Sbjct: 310 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF----SEHRTQV 365
Query: 245 KIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDK 304
+ + + + N P++ W++ VS +A+D + K
Sbjct: 366 SLKDQITSGKYN---------FIPEV-----------WAE---------VSEKALDLVKK 396
Query: 305 LLRYDHQDRLTAREAMAHPYF 325
LL D + R T EA+ HP+
Sbjct: 397 LLVVDPKARFTTEEALRHPWL 417
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 118/297 (39%), Gaps = 51/297 (17%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTN-----ERCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
+D+E+ R +G+GK+ V+ + + +Q+
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYD---IRYYIYELLKALDYCH 149
PN+++L D + LI EY L+ +D YI EL AL YCH
Sbjct: 68 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S+ ++HRD+KP N+++ +L++ D+G + + P + + PE +++ +
Sbjct: 126 SKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRXXLCGTLDYLPPE-MIEGRM 182
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
+D +D+WSLG + + K PF E N Y Y
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPF--------------------EANTYQETYK------ 216
Query: 270 LDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFA 326
R SR +F D V+ A D + +LL+++ R RE + HP+
Sbjct: 217 ------RISR---VEFTFPD---FVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 261
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 118/297 (39%), Gaps = 51/297 (17%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTN-----ERCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
+D+E+ R +G+GK+ V+ + + +Q+
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYD---IRYYIYELLKALDYCH 149
PN+++L D + LI EY L+ +D YI EL AL YCH
Sbjct: 69 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S+ ++HRD+KP N+++ +L++ D+G + + P + + PE +++ +
Sbjct: 127 SKRVIHRDIKPENLLLG-SAGELKIADFGWS-CHAPSSRRTTLSGTLDYLPPE-MIEGRM 183
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
+D +D+WSLG + + K PF E N Y Y
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPF--------------------EANTYQETYK------ 217
Query: 270 LDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFA 326
R SR +F D V+ A D + +LL+++ R RE + HP+
Sbjct: 218 ------RISR---VEFTFPD---FVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 262
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 118/297 (39%), Gaps = 51/297 (17%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTN-----ERCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
+D+E+ R +G+GK+ V+ + + +Q+
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYD---IRYYIYELLKALDYCH 149
PN+++L D + LI EY L+ +D YI EL AL YCH
Sbjct: 71 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S+ ++HRD+KP N+++ +L++ D+G + + P + + PE +++ +
Sbjct: 129 SKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRXXLCGTLDYLPPE-MIEGRM 185
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
+D +D+WSLG + + K PF E N Y Y
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPF--------------------EANTYQETYK------ 219
Query: 270 LDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFA 326
R SR +F D V+ A D + +LL+++ R RE + HP+
Sbjct: 220 ------RISR---VEFTFPD---FVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 264
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 88/201 (43%), Gaps = 37/201 (18%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLAEFYHPG 186
L + + Y Y++L A+ Y H GI+HRD+KP NV++ + +++ D+G ++
Sbjct: 236 LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 295
Query: 187 KEYNVRVASRYFKGPELLVDL--QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLV 244
+ + PE+LV + Y+ ++D WSLG + + PF H V
Sbjct: 296 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF----SEHRTQV 351
Query: 245 KIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDK 304
+ + + + N P++ W++ VS +A+D + K
Sbjct: 352 SLKDQITSGKYN---------FIPEV-----------WAE---------VSEKALDLVKK 382
Query: 305 LLRYDHQDRLTAREAMAHPYF 325
LL D + R T EA+ HP+
Sbjct: 383 LLVVDPKARFTTEEALRHPWL 403
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 118/297 (39%), Gaps = 51/297 (17%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTN-----ERCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
+D+E+ R +G+GK+ V+ + + +Q+
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYD---IRYYIYELLKALDYCH 149
PN+++L D + LI EY L+ +D YI EL AL YCH
Sbjct: 68 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S+ ++HRD+KP N+++ +L++ D+G + + P + + PE +++ +
Sbjct: 126 SKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTELCGTLDYLPPE-MIEGRM 182
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
+D +D+WSLG + + K PF E N Y Y
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPF--------------------EANTYQETYK------ 216
Query: 270 LDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFA 326
R SR +F D V+ A D + +LL+++ R RE + HP+
Sbjct: 217 ------RISR---VEFTFPD---FVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 261
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 118/297 (39%), Gaps = 51/297 (17%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTN-----ERCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
+D+E+ R +G+GK+ V+ + + +Q+
Sbjct: 10 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 69
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYD---IRYYIYELLKALDYCH 149
PN+++L D + LI EY L+ +D YI EL AL YCH
Sbjct: 70 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 127
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S+ ++HRD+KP N+++ +L++ D+G + + P + + PE +++ +
Sbjct: 128 SKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRXXLCGTLDYLPPE-MIEGRM 184
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
+D +D+WSLG + + K PF E N Y Y
Sbjct: 185 HDEKVDLWSLGVLCYEFLVGKPPF--------------------EANTYQETYK------ 218
Query: 270 LDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFA 326
R SR +F D V+ A D + +LL+++ R RE + HP+
Sbjct: 219 ------RISR---VEFTFPD---FVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 263
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 119/297 (40%), Gaps = 51/297 (17%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTN-----ERCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
+D+E+ R +G+GK+ V+ + + +Q+
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYD---IRYYIYELLKALDYCH 149
PN+++L D + LI EY L+ +D YI EL AL YCH
Sbjct: 71 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S+ ++HRD+KP N+++ +L++ D+G + + P + + + PE +++ +
Sbjct: 129 SKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRDDLCGTLDYLPPE-MIEGRM 185
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
+D +D+WSLG + + K PF E N Y Y
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPF--------------------EANTYQETYK------ 219
Query: 270 LDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFA 326
R SR +F D V+ A D + +LL+++ R RE + HP+
Sbjct: 220 ------RISR---VEFTFPD---FVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 264
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 75/144 (52%), Gaps = 6/144 (4%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNST---DFKVLYPTLTDYDIRYYIYELLKALDYCH 149
PN+VKL +++ + KT L+ EY + D+ V + + + R +++ A+ YCH
Sbjct: 73 PNIVKLFEVIETE--KTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCH 130
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
+ I+HRD+K N+++D + +++ D+G + + G + + + + PEL +
Sbjct: 131 QKFIVHRDLKAENLLLDAD-XNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKY 189
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPF 233
+D+WSLG + ++ PF
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 118/297 (39%), Gaps = 51/297 (17%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTN-----ERCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
+D+E+ R +G+GK+ V+ + + +Q+
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYD---IRYYIYELLKALDYCH 149
PN+++L D + LI EY L+ +D YI EL AL YCH
Sbjct: 68 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S+ ++HRD+KP N+++ +L++ D+G + + P + + PE +++ +
Sbjct: 126 SKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPE-MIEGRM 182
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
+D +D+WSLG + + K PF E N Y Y
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPF--------------------EANTYQETYK------ 216
Query: 270 LDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFA 326
R SR +F D V+ A D + +LL+++ R RE + HP+
Sbjct: 217 ------RISR---VEFTFPD---FVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 261
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 118/297 (39%), Gaps = 51/297 (17%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTN-----ERCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
+D+E+ R +G+GK+ V+ + + +Q+
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYD---IRYYIYELLKALDYCH 149
PN+++L D + LI EY L+ +D YI EL AL YCH
Sbjct: 73 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S+ ++HRD+KP N+++ +L++ D+G + + P + + PE +++ +
Sbjct: 131 SKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPE-MIEGRM 187
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
+D +D+WSLG + + K PF E N Y Y
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPF--------------------EANTYQETYK------ 221
Query: 270 LDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFA 326
R SR +F D V+ A D + +LL+++ R RE + HP+
Sbjct: 222 ------RISR---VEFTFPD---FVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 266
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 118/297 (39%), Gaps = 51/297 (17%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTN-----ERCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
+D+E+ R +G+GK+ V+ + + +Q+
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYD---IRYYIYELLKALDYCH 149
PN+++L D + LI EY L+ +D YI EL AL YCH
Sbjct: 71 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S+ ++HRD+KP N+++ +L++ ++G + + P + + PE +++ +
Sbjct: 129 SKRVIHRDIKPENLLLG-SAGELKIANFGWS-VHAPSSRRTTLCGTLDYLPPE-MIEGRM 185
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
+D +D+WSLG + + K PF E N Y Y
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPF--------------------EANTYQETYK------ 219
Query: 270 LDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFA 326
R SR +F D V+ A D + +LL+++ R RE + HP+
Sbjct: 220 ------RISR---VEFTFPD---FVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 264
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 118/297 (39%), Gaps = 51/297 (17%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTN-----ERCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
+D+E+ R +G+GK+ V+ + + +Q+
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYD---IRYYIYELLKALDYCH 149
PN+++L D + LI EY L+ +D YI EL AL YCH
Sbjct: 69 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S+ ++HRD+KP N+++ +L++ D+G + + P + + PE +++ +
Sbjct: 127 SKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPE-MIEGRM 183
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
+D +D+WSLG + + K PF E N Y Y
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPF--------------------EANTYQETYK------ 217
Query: 270 LDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFA 326
R SR +F D V+ A D + +LL+++ R RE + HP+
Sbjct: 218 ------RISR---VEFTFPD---FVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 262
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 118/297 (39%), Gaps = 51/297 (17%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTN-----ERCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
+D+E+ R +G+GK+ V+ + + +Q+
Sbjct: 10 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 69
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYD---IRYYIYELLKALDYCH 149
PN+++L D + LI EY L+ +D YI EL AL YCH
Sbjct: 70 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 127
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S+ ++HRD+KP N+++ +L++ ++G + + P + + PE +++ +
Sbjct: 128 SKRVIHRDIKPENLLLG-SAGELKIANFGWS-VHAPSSRRTTLCGTLDYLPPE-MIEGRM 184
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
+D +D+WSLG + + K PF E N Y Y
Sbjct: 185 HDEKVDLWSLGVLCYEFLVGKPPF--------------------EANTYQETYK------ 218
Query: 270 LDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFA 326
R SR +F D V+ A D + +LL+++ R RE + HP+
Sbjct: 219 ------RISR---VEFTFPD---FVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 263
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 118/297 (39%), Gaps = 51/297 (17%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTN-----ERCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
+D+E+ R +G+GK+ V+ + + +Q+
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYD---IRYYIYELLKALDYCH 149
PN+++L D + LI EY L+ +D YI EL AL YCH
Sbjct: 68 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S+ ++HRD+KP N+++ +L++ D+G + + P + + PE +++ +
Sbjct: 126 SKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPE-MIEGRM 182
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQ 269
+D +D+WSLG + + K PF E N Y Y
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPF--------------------EANTYQETYK------ 216
Query: 270 LDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFA 326
R SR +F D V+ A D + +LL+++ R RE + HP+
Sbjct: 217 ------RISR---VEFTFPD---FVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 261
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 73/147 (49%), Gaps = 12/147 (8%)
Query: 93 PNVVKLLDIVRDQHSKTPS---LIFEYVNST---DFKVLYPTLTDYDIRYYIYELLKALD 146
P+++KL ++ TP+ ++ EYV+ D+ + + + + R ++L A+D
Sbjct: 71 PHIIKLYQVI-----STPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVD 125
Query: 147 YCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 206
YCH ++HRD+KP NV++D + ++ D+GL+ G+ S + PE++
Sbjct: 126 YCHRHMVVHRDLKPENVLLDAHMNA-KIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISG 184
Query: 207 LQDYDYSLDMWSLGCMFAGMIFRKEPF 233
+D+WS G + ++ PF
Sbjct: 185 RLYAGPEVDIWSCGVILYALLCGTLPF 211
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 104/239 (43%), Gaps = 43/239 (17%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNST---DFKVLYPTLTDYDIRYYIYELLKALDYCH 149
PNV+ L ++ ++ LI E V DF +LT+ + ++ ++L + Y H
Sbjct: 74 PNVITLHEVYENKTDVI--LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 150 SQGIMHRDVKPHNVM-IDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 206
S I H D+KP N+M +D + K +++ID+GLA G E+ + F PE +V+
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPE-IVN 190
Query: 207 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLEL 266
+ DMWS+G + ++ PF G + L ++ V Y E
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANVSAV-----------NYEFED 238
Query: 267 DPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 325
+ F N S A DF+ +LL D + R+T ++++ HP+
Sbjct: 239 E----------------YFSN------TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 123/298 (41%), Gaps = 53/298 (17%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTN-----ERCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
+D+E+ R +G+GK+ V+ + + +Q+
Sbjct: 34 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 93
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVN-STDFKVLYPTLTDYD---IRYYIYELLKALDYC 148
PN+++L D + LI EY T ++ L L+ +D YI EL AL YC
Sbjct: 94 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITELANALSYC 150
Query: 149 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 208
HS+ ++HRD+KP N+++ +L++ D+G + + P + + + PE +++ +
Sbjct: 151 HSKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRDDLCGTLDYLPPE-MIEGR 207
Query: 209 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDP 268
+D +D+WSLG + + K PF E N Y Y
Sbjct: 208 MHDEKVDLWSLGVLCYEFLVGKPPF--------------------EANTYQETYK----- 242
Query: 269 QLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFA 326
R SR +F D V+ A D + +LL+++ R RE + HP+
Sbjct: 243 -------RISR---VEFTFPD---FVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 287
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 98/220 (44%), Gaps = 11/220 (5%)
Query: 23 LCFWNVSSYVIFSDQDDYEVVRKVGRGKYSEVFEGINVNTNE----RCXXXXXXXXXXXX 78
C W I +D+ V R +GRG + EV+ +T + +C
Sbjct: 174 FCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGE 233
Query: 79 XXXXXXXLQ-NLCGGPNVVKLLDIVRDQHSKTP-SLIFEYVNSTDFK---VLYPTLTDYD 133
+ +L + ++ + H+ S I + +N D + ++ D
Sbjct: 234 TLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEAD 293
Query: 134 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRV 193
+R+Y E++ L++ H++ +++RD+KP N+++D E +R+ D GLA + K + V
Sbjct: 294 MRFYAAEIILGLEHMHNRFVVYRDLKPANILLD-EHGHVRISDLGLACDFSKKKPH-ASV 351
Query: 194 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 233
+ + PE+L YD S D +SLGCM ++ PF
Sbjct: 352 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 118/295 (40%), Gaps = 42/295 (14%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGGPNVVK 97
D YEV +G G YS I+ TN L+ PN++
Sbjct: 22 DGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEILLR-YGQHPNIIT 80
Query: 98 LLDIVRDQHSKTPSLIFEYVNSTDF--KVLYPTL-TDYDIRYYIYELLKALDYCHSQGIM 154
L D+ D K ++ E + K+L ++ + ++ + K ++Y H+QG++
Sbjct: 81 LKDVYDD--GKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVV 138
Query: 155 HRDVKPHNVMIDHEL---RKLRLIDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDLQDY 210
HRD+KP N++ E +R+ D+G A + + F PE+L + Q Y
Sbjct: 139 HRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAPEVL-ERQGY 197
Query: 211 DYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQL 270
D + D+WSLG + + PF G D+ + +I +G+ +
Sbjct: 198 DAACDIWSLGVLLYTXLTGYTPFANGPDDTPE--EILARIGSGKF--------------- 240
Query: 271 DALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 325
+L G + W+ VS A D + K L D RLTA + HP+
Sbjct: 241 -SLSGGY----WNS---------VSDTAKDLVSKXLHVDPHQRLTAALVLRHPWI 281
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 98/220 (44%), Gaps = 11/220 (5%)
Query: 23 LCFWNVSSYVIFSDQDDYEVVRKVGRGKYSEVFEGINVNTNE----RCXXXXXXXXXXXX 78
C W I +D+ V R +GRG + EV+ +T + +C
Sbjct: 173 FCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGE 232
Query: 79 XXXXXXXLQ-NLCGGPNVVKLLDIVRDQHSKTP-SLIFEYVNSTDFK---VLYPTLTDYD 133
+ +L + ++ + H+ S I + +N D + ++ D
Sbjct: 233 TLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEAD 292
Query: 134 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRV 193
+R+Y E++ L++ H++ +++RD+KP N+++D E +R+ D GLA + K + V
Sbjct: 293 MRFYAAEIILGLEHMHNRFVVYRDLKPANILLD-EHGHVRISDLGLACDFSKKKPH-ASV 350
Query: 194 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 233
+ + PE+L YD S D +SLGCM ++ PF
Sbjct: 351 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 390
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 98/220 (44%), Gaps = 11/220 (5%)
Query: 23 LCFWNVSSYVIFSDQDDYEVVRKVGRGKYSEVFEGINVNTNE----RCXXXXXXXXXXXX 78
C W I +D+ V R +GRG + EV+ +T + +C
Sbjct: 174 FCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGE 233
Query: 79 XXXXXXXLQ-NLCGGPNVVKLLDIVRDQHSKTP-SLIFEYVNSTDFK---VLYPTLTDYD 133
+ +L + ++ + H+ S I + +N D + ++ D
Sbjct: 234 TLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEAD 293
Query: 134 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRV 193
+R+Y E++ L++ H++ +++RD+KP N+++D E +R+ D GLA + K + V
Sbjct: 294 MRFYAAEIILGLEHMHNRFVVYRDLKPANILLD-EHGHVRISDLGLACDFSKKKPH-ASV 351
Query: 194 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 233
+ + PE+L YD S D +SLGCM ++ PF
Sbjct: 352 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 98/220 (44%), Gaps = 11/220 (5%)
Query: 23 LCFWNVSSYVIFSDQDDYEVVRKVGRGKYSEVFEGINVNTNE----RCXXXXXXXXXXXX 78
C W I +D+ V R +GRG + EV+ +T + +C
Sbjct: 174 FCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGE 233
Query: 79 XXXXXXXLQ-NLCGGPNVVKLLDIVRDQHSKTP-SLIFEYVNSTDFK---VLYPTLTDYD 133
+ +L + ++ + H+ S I + +N D + ++ D
Sbjct: 234 TLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEAD 293
Query: 134 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRV 193
+R+Y E++ L++ H++ +++RD+KP N+++D E +R+ D GLA + K + V
Sbjct: 294 MRFYAAEIILGLEHMHNRFVVYRDLKPANILLD-EHGHVRISDLGLACDFSKKKPH-ASV 351
Query: 194 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 233
+ + PE+L YD S D +SLGCM ++ PF
Sbjct: 352 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 126/303 (41%), Gaps = 47/303 (15%)
Query: 35 SDQDDYEVVRKVGRGKYSEVFEGINVNTNE----RCXXXXXXXXXXXXXXXXXXXLQNLC 90
S D+Y++ +G+G +S V + + T + + L
Sbjct: 1 SMTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 91 GGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDF---KVLYPTLTDYDIRYYIYELLKALDY 147
N+V+L D + ++ L+F+ V + V ++ D + I ++L+A+ +
Sbjct: 61 KHSNIVRLHDSISEEGFHY--LVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLH 118
Query: 148 CHSQGIMHRDVKPHNVMIDHELR--KLRLIDWGLA-EFYHPGKEYNVRVASRYFKGPELL 204
CH G++HRD+KP N+++ + + ++L D+GLA E + + + + PE+L
Sbjct: 119 CHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVL 178
Query: 205 VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHL 264
+ Y +D+W+ G + ++ P F+ D H
Sbjct: 179 RK-EAYGKPVDIWACGVILY-ILLVGYPPFWDEDQH------------------------ 212
Query: 265 ELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPY 324
+L Q+ A W V+PEA + ++++L + R+TA EA+ HP+
Sbjct: 213 KLYQQIKAGAYDFPSPEWDT---------VTPEAKNLINQMLTINPAKRITAHEALKHPW 263
Query: 325 FAQ 327
Q
Sbjct: 264 VCQ 266
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 104/239 (43%), Gaps = 43/239 (17%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNST---DFKVLYPTLTDYDIRYYIYELLKALDYCH 149
PNV+ L ++ ++ LI E V DF +LT+ + ++ ++L + Y H
Sbjct: 74 PNVITLHEVYENKTDVI--LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 150 SQGIMHRDVKPHNVM-IDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 206
S I H D+KP N+M +D + K +++ID+GLA G E+ + F PE +V+
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE-IVN 190
Query: 207 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLEL 266
+ DMWS+G + ++ PF G + L ++ V Y E
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANVSAV-----------NYEFED 238
Query: 267 DPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 325
+ F N S A DF+ +LL D + R+T ++++ HP+
Sbjct: 239 E----------------YFSN------TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 104/239 (43%), Gaps = 43/239 (17%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNST---DFKVLYPTLTDYDIRYYIYELLKALDYCH 149
PNV+ L ++ ++ LI E V DF +LT+ + ++ ++L + Y H
Sbjct: 74 PNVITLHEVYENKTDVI--LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 150 SQGIMHRDVKPHNVM-IDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 206
S I H D+KP N+M +D + K +++ID+GLA G E+ + F PE +V+
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE-IVN 190
Query: 207 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLEL 266
+ DMWS+G + ++ PF G + L ++ V Y E
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANVSAV-----------NYEFED 238
Query: 267 DPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 325
+ F N S A DF+ +LL D + R+T ++++ HP+
Sbjct: 239 E----------------YFSN------TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 119/301 (39%), Gaps = 45/301 (14%)
Query: 38 DDYEVVRKV-GRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGGPNVV 96
DDY+V +V G G +V + N T E+ + C P++V
Sbjct: 31 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC--PHIV 88
Query: 97 KLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYI----YELLK----ALDYC 148
+++D+ + ++ L+ + D L+ + D + + E++K A+ Y
Sbjct: 89 RIVDVYENLYAGRKCLLI-VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 147
Query: 149 HSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 206
HS I HRDVKP N++ + L+L D+G A+ + Y+ PE+L
Sbjct: 148 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL-G 206
Query: 207 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLEL 266
+ YD S DMWSLG + ++ PF+ H L +
Sbjct: 207 PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG-------------------------LAI 241
Query: 267 DPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFA 326
P + + R +F N + VS E + LL+ + R+T E M HP+
Sbjct: 242 SPGMKTRI----RMGQYEFPNPEWSE-VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM 296
Query: 327 Q 327
Q
Sbjct: 297 Q 297
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 119/301 (39%), Gaps = 45/301 (14%)
Query: 38 DDYEVVRKV-GRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGGPNVV 96
DDY+V +V G G +V + N T E+ + C P++V
Sbjct: 16 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC--PHIV 73
Query: 97 KLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYI----YELLK----ALDYC 148
+++D+ + ++ L+ + D L+ + D + + E++K A+ Y
Sbjct: 74 RIVDVYENLYAGRKCLLI-VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 132
Query: 149 HSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 206
HS I HRDVKP N++ + L+L D+G A+ + Y+ PE+L
Sbjct: 133 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL-G 191
Query: 207 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLEL 266
+ YD S DMWSLG + ++ PF+ H L +
Sbjct: 192 PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG-------------------------LAI 226
Query: 267 DPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFA 326
P + + R +F N + VS E + LL+ + R+T E M HP+
Sbjct: 227 SPGMKTRI----RMGQYEFPNPEWSE-VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM 281
Query: 327 Q 327
Q
Sbjct: 282 Q 282
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 104/239 (43%), Gaps = 43/239 (17%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNST---DFKVLYPTLTDYDIRYYIYELLKALDYCH 149
PNV+ L ++ ++ LI E V DF +LT+ + ++ ++L + Y H
Sbjct: 74 PNVITLHEVYENKTDVI--LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 150 SQGIMHRDVKPHNVM-IDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 206
S I H D+KP N+M +D + K +++ID+GLA G E+ + F PE +V+
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE-IVN 190
Query: 207 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLEL 266
+ DMWS+G + ++ PF G + L ++ V Y E
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANVSAV-----------NYEFED 238
Query: 267 DPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 325
+ F N S A DF+ +LL D + R+T ++++ HP+
Sbjct: 239 E----------------YFSNT------SALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 123/301 (40%), Gaps = 45/301 (14%)
Query: 38 DDYEVVRKV-GRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGGPNVV 96
DDY+V +V G G +V + N T E+ + C P++V
Sbjct: 21 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC--PHIV 78
Query: 97 KLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYI----YELLK----ALDYC 148
+++D+ + ++ L+ + D L+ + D + + E++K A+ Y
Sbjct: 79 RIVDVYENLYAGRKCLLI-VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 137
Query: 149 HSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 206
HS I HRDVKP N++ + L+L D+G A+ + Y+ PE+L
Sbjct: 138 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL-G 196
Query: 207 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLEL 266
+ YD S DMWSLG + ++ PF+ H + I+ + T + +Y
Sbjct: 197 PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG-----LAISPGMKT---RIRMGQYEFP- 247
Query: 267 DPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFA 326
+P+ WS+ VS E + LL+ + R+T E M HP+
Sbjct: 248 NPE------------WSE---------VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM 286
Query: 327 Q 327
Q
Sbjct: 287 Q 287
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 123/301 (40%), Gaps = 45/301 (14%)
Query: 38 DDYEVVRKV-GRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGGPNVV 96
DDY+V +V G G +V + N T E+ + C P++V
Sbjct: 23 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC--PHIV 80
Query: 97 KLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYI----YELLK----ALDYC 148
+++D+ + ++ L+ + D L+ + D + + E++K A+ Y
Sbjct: 81 RIVDVYENLYAGRKCLLI-VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 139
Query: 149 HSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 206
HS I HRDVKP N++ + L+L D+G A+ + Y+ PE+L
Sbjct: 140 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL-G 198
Query: 207 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLEL 266
+ YD S DMWSLG + ++ PF+ H + I+ + T + +Y
Sbjct: 199 PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG-----LAISPGMKT---RIRMGQYEFP- 249
Query: 267 DPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFA 326
+P+ WS+ VS E + LL+ + R+T E M HP+
Sbjct: 250 NPE------------WSE---------VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM 288
Query: 327 Q 327
Q
Sbjct: 289 Q 289
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 123/301 (40%), Gaps = 45/301 (14%)
Query: 38 DDYEVVRKV-GRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGGPNVV 96
DDY+V +V G G +V + N T E+ + C P++V
Sbjct: 22 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC--PHIV 79
Query: 97 KLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYI----YELLK----ALDYC 148
+++D+ + ++ L+ + D L+ + D + + E++K A+ Y
Sbjct: 80 RIVDVYENLYAGRKCLLI-VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 138
Query: 149 HSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 206
HS I HRDVKP N++ + L+L D+G A+ + Y+ PE+L
Sbjct: 139 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL-G 197
Query: 207 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLEL 266
+ YD S DMWSLG + ++ PF+ H + I+ + T + +Y
Sbjct: 198 PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG-----LAISPGMKT---RIRMGQYEFP- 248
Query: 267 DPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFA 326
+P+ WS+ VS E + LL+ + R+T E M HP+
Sbjct: 249 NPE------------WSE---------VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM 287
Query: 327 Q 327
Q
Sbjct: 288 Q 288
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 119/301 (39%), Gaps = 45/301 (14%)
Query: 38 DDYEVVRKV-GRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGGPNVV 96
DDY+V +V G G +V + N T E+ + C P++V
Sbjct: 15 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC--PHIV 72
Query: 97 KLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYI----YELLK----ALDYC 148
+++D+ + ++ L+ + D L+ + D + + E++K A+ Y
Sbjct: 73 RIVDVYENLYAGRKCLLI-VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 131
Query: 149 HSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 206
HS I HRDVKP N++ + L+L D+G A+ + Y+ PE+L
Sbjct: 132 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL-G 190
Query: 207 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLEL 266
+ YD S DMWSLG + ++ PF+ H L +
Sbjct: 191 PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG-------------------------LAI 225
Query: 267 DPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFA 326
P + + R +F N + VS E + LL+ + R+T E M HP+
Sbjct: 226 SPGMKTRI----RMGQYEFPNPEWSE-VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM 280
Query: 327 Q 327
Q
Sbjct: 281 Q 281
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 104/238 (43%), Gaps = 43/238 (18%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNST---DFKVLYPTLTDYDIRYYIYELLKALDYCH 149
PNV+ L ++ ++ LI E V DF +LT+ + ++ ++L + Y H
Sbjct: 74 PNVITLHEVYENKTDVI--LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 150 SQGIMHRDVKPHNVM-IDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 206
S I H D+KP N+M +D + K +++ID+GLA G E+ + F PE +V+
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE-IVN 190
Query: 207 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLEL 266
+ DMWS+G + ++ PF G + L ++ V Y E
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANVSAV-----------NYEFED 238
Query: 267 DPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPY 324
+ F N S A DF+ +LL D + R+T ++++ HP+
Sbjct: 239 E----------------YFSN------TSALAKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 104/238 (43%), Gaps = 43/238 (18%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNST---DFKVLYPTLTDYDIRYYIYELLKALDYCH 149
PNV+ L ++ ++ LI E V DF +LT+ + ++ ++L + Y H
Sbjct: 73 PNVITLHEVYENKTDVI--LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 130
Query: 150 SQGIMHRDVKPHNVM-IDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 206
S I H D+KP N+M +D + K +++ID+GLA G E+ + F PE +V+
Sbjct: 131 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE-IVN 189
Query: 207 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLEL 266
+ DMWS+G + ++ PF G + L ++ V Y E
Sbjct: 190 YEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANVSAV-----------NYEFED 237
Query: 267 DPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPY 324
+ F N S A DF+ +LL D + R+T ++++ HP+
Sbjct: 238 E----------------YFSN------TSALAKDFIRRLLVKDPKKRMTIQDSLQHPW 273
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 104/238 (43%), Gaps = 43/238 (18%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNST---DFKVLYPTLTDYDIRYYIYELLKALDYCH 149
PNV+ L ++ ++ LI E V DF +LT+ + ++ ++L + Y H
Sbjct: 73 PNVITLHEVYENKTDVI--LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 130
Query: 150 SQGIMHRDVKPHNVM-IDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 206
S I H D+KP N+M +D + K +++ID+GLA G E+ + F PE +V+
Sbjct: 131 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE-IVN 189
Query: 207 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLEL 266
+ DMWS+G + ++ PF G + L ++ V Y E
Sbjct: 190 YEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANVSAV-----------NYEFED 237
Query: 267 DPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPY 324
+ F N S A DF+ +LL D + R+T ++++ HP+
Sbjct: 238 E----------------YFSN------TSALAKDFIRRLLVKDPKKRMTIQDSLQHPW 273
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 96/217 (44%), Gaps = 54/217 (24%)
Query: 112 LIFEYVNSTDFKVL----YPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDH 167
LIFE + + ++++ Y DI+ Y E+LKAL+Y + H D+KP N+++D
Sbjct: 113 LIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDD 172
Query: 168 --------ELRK----------------LRLIDWGLAEF---YHPGKEYNVRVASRYFKG 200
+R+ ++LID+G A F YH + +R ++
Sbjct: 173 PYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGS-----IINTRQYRA 227
Query: 201 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLN 260
PE++++L +D S DMWS GC+ A + + F H++ + L + +
Sbjct: 228 PEVILNL-GWDVSSDMWSFGCVLAEL-YTGSLLFRTHEHMEHLAMMESI----------- 274
Query: 261 KYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPE 297
+ P ++ ++ SK++N D L PE
Sbjct: 275 -----IQPIPKNMLYEATKTNGSKYVNKDELKLAWPE 306
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 119/301 (39%), Gaps = 45/301 (14%)
Query: 38 DDYEVVRKV-GRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGGPNVV 96
DDY+V +V G G +V + N T E+ + C P++V
Sbjct: 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC--PHIV 74
Query: 97 KLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYI----YELLK----ALDYC 148
+++D+ + ++ L+ + D L+ + D + + E++K A+ Y
Sbjct: 75 RIVDVYENLYAGRKCLLI-VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 133
Query: 149 HSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 206
HS I HRDVKP N++ + L+L D+G A+ + Y+ PE+L
Sbjct: 134 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL-G 192
Query: 207 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLEL 266
+ YD S DMWSLG + ++ PF+ H L +
Sbjct: 193 PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG-------------------------LAI 227
Query: 267 DPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFA 326
P + + R +F N + VS E + LL+ + R+T E M HP+
Sbjct: 228 SPGMKTRI----RMGQYEFPNPEWSE-VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM 282
Query: 327 Q 327
Q
Sbjct: 283 Q 283
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 104/239 (43%), Gaps = 43/239 (17%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNST---DFKVLYPTLTDYDIRYYIYELLKALDYCH 149
PNV+ L ++ ++ LI E V DF +LT+ + ++ ++L + Y H
Sbjct: 74 PNVITLHEVYENKTDVI--LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 150 SQGIMHRDVKPHNVM-IDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 206
S I H D+KP N+M +D + K +++ID+GLA G E+ + F PE +V+
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE-IVN 190
Query: 207 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLEL 266
+ DMWS+G + ++ PF G + L ++ V Y E
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANVSAV-----------NYEFED 238
Query: 267 DPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 325
+ F N S A DF+ +LL D + R+T ++++ HP+
Sbjct: 239 E----------------YFSNT------SALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 104/238 (43%), Gaps = 43/238 (18%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNST---DFKVLYPTLTDYDIRYYIYELLKALDYCH 149
PNV+ L ++ ++ LI E V DF +LT+ + ++ ++L + Y H
Sbjct: 74 PNVITLHEVYENKTDVI--LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 150 SQGIMHRDVKPHNVM-IDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 206
S I H D+KP N+M +D + K +++ID+GLA G E+ + F PE +V+
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE-IVN 190
Query: 207 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLEL 266
+ DMWS+G + ++ PF G + L ++ V Y E
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANVSAV-----------NYEFED 238
Query: 267 DPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPY 324
+ F N S A DF+ +LL D + R+T ++++ HP+
Sbjct: 239 E----------------YFSN------TSALAKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 120/300 (40%), Gaps = 59/300 (19%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTN-----ERCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
+D+++ R +G+GK+ V+ + + +Q+
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYD---IRYYIYELLKALDYCH 149
PN+++L D + LI EY L+ +D YI EL AL YCH
Sbjct: 72 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCH 129
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S+ ++HRD+KP N+++ +L++ D+G + + P + + + PE +++ +
Sbjct: 130 SKRVIHRDIKPENLLLGSN-GELKIADFGWS-VHAPSSRRDTLCGTLDYLPPE-MIEGRM 186
Query: 210 YDYSLDMWSLGCM----FAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLE 265
+D +D+WSLG + GM P F H + +I++V
Sbjct: 187 HDEKVDLWSLGVLCYEFLVGM-----PPFEAHTYQETYRRISRV---------------- 225
Query: 266 LDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 325
+F D V+ A D + +LL+++ RLT E + HP+
Sbjct: 226 ------------------EFTFPD---FVTEGARDLISRLLKHNASQRLTLAEVLEHPWI 264
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 104/239 (43%), Gaps = 43/239 (17%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNST---DFKVLYPTLTDYDIRYYIYELLKALDYCH 149
PNV+ L ++ ++ LI E V DF +LT+ + ++ ++L + Y H
Sbjct: 74 PNVITLHEVYENKTDVI--LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 150 SQGIMHRDVKPHNVM-IDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 206
S I H D+KP N+M +D + K +++ID+GLA G E+ + F PE +V+
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE-IVN 190
Query: 207 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLEL 266
+ DMWS+G + ++ PF G + L ++ V Y E
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANVSAV-----------NYEFED 238
Query: 267 DPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 325
+ F N S A DF+ +LL D + R+T ++++ HP+
Sbjct: 239 E----------------YFSNT------SALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 119/300 (39%), Gaps = 59/300 (19%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTN-----ERCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
+D+++ R +G+GK+ V+ + + +Q+
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYD---IRYYIYELLKALDYCH 149
PN+++L D + LI EY L+ +D YI EL AL YCH
Sbjct: 72 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCH 129
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S+ ++HRD+KP N+++ +L++ D+G + + P + + PE +++ +
Sbjct: 130 SKRVIHRDIKPENLLLGSN-GELKIADFGWS-VHAPSSRRTTLCGTLDYLPPE-MIEGRM 186
Query: 210 YDYSLDMWSLGCM----FAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLE 265
+D +D+WSLG + GM P F H + +I++V
Sbjct: 187 HDEKVDLWSLGVLCYEFLVGM-----PPFEAHTYQETYRRISRV---------------- 225
Query: 266 LDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 325
+F D V+ A D + +LL+++ RLT E + HP+
Sbjct: 226 ------------------EFTFPD---FVTEGARDLISRLLKHNASQRLTLAEVLEHPWI 264
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 38/203 (18%)
Query: 124 VLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGL-AEF 182
V + + + I +L+AL Y H+QG++HRD+K ++++ + R ++L D+G A+
Sbjct: 133 VTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGR-IKLSDFGFCAQV 191
Query: 183 YHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQ 242
+ V + Y+ PE++ L Y +D+WSLG M MI + P+F N
Sbjct: 192 SKEVPKRKXLVGTPYWMAPEVISRL-PYGTEVDIWSLGIMVIEMIDGEPPYF----NEPP 246
Query: 243 LVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFL 302
L + ++ R S P K + H VS FL
Sbjct: 247 LQAMRRI--------------------------RDSLPPRVK-----DLHKVSSVLRGFL 275
Query: 303 DKLLRYDHQDRLTAREAMAHPYF 325
D +L + R TA+E + HP+
Sbjct: 276 DLMLVREPSQRATAQELLGHPFL 298
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 104/239 (43%), Gaps = 43/239 (17%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNST---DFKVLYPTLTDYDIRYYIYELLKALDYCH 149
PNV+ L ++ ++ LI E V DF +LT+ + ++ ++L + Y H
Sbjct: 74 PNVITLHEVYENKTDVI--LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 150 SQGIMHRDVKPHNVM-IDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 206
S I H D+KP N+M +D + K +++ID+GLA G E+ + F PE +V+
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE-IVN 190
Query: 207 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLEL 266
+ DMWS+G + ++ PF G + L ++ V Y E
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANVSAV-----------NYEFED 238
Query: 267 DPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 325
+ F N S A DF+ +LL D + R+T ++++ HP+
Sbjct: 239 E----------------YFSNT------SALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 104/238 (43%), Gaps = 43/238 (18%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNST---DFKVLYPTLTDYDIRYYIYELLKALDYCH 149
PNV+ L ++ ++ LI E V DF +LT+ + ++ ++L + Y H
Sbjct: 74 PNVITLHEVYENKTDVI--LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 150 SQGIMHRDVKPHNVM-IDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 206
S I H D+KP N+M +D + K +++ID+GLA G E+ + F PE +V+
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE-IVN 190
Query: 207 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLEL 266
+ DMWS+G + ++ PF G + L ++ V Y E
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANVSAV-----------NYEFED 238
Query: 267 DPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPY 324
+ F N S A DF+ +LL D + R+T ++++ HP+
Sbjct: 239 E----------------YFSN------TSALAKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 123/301 (40%), Gaps = 45/301 (14%)
Query: 38 DDYEVVRKV-GRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGGPNVV 96
DDY+V +V G G +V + N T E+ + C P++V
Sbjct: 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC--PHIV 118
Query: 97 KLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYI----YELLK----ALDYC 148
+++D+ + ++ L+ + D L+ + D + + E++K A+ Y
Sbjct: 119 RIVDVYENLYAGRKCLLI-VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 177
Query: 149 HSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 206
HS I HRDVKP N++ + L+L D+G A+ + Y+ PE+L
Sbjct: 178 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL-G 236
Query: 207 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLEL 266
+ YD S DMWSLG + ++ PF+ H + I+ + T + +Y
Sbjct: 237 PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG-----LAISPGMKT---RIRMGQYEFP- 287
Query: 267 DPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFA 326
+P+ WS+ VS E + LL+ + R+T E M HP+
Sbjct: 288 NPE------------WSE---------VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM 326
Query: 327 Q 327
Q
Sbjct: 327 Q 327
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 104/239 (43%), Gaps = 43/239 (17%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNST---DFKVLYPTLTDYDIRYYIYELLKALDYCH 149
PNV+ L ++ ++ LI E V DF +LT+ + ++ ++L + Y H
Sbjct: 74 PNVITLHEVYENKTDVI--LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 150 SQGIMHRDVKPHNVM-IDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 206
S I H D+KP N+M +D + K +++ID+GLA G E+ + F PE +V+
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE-IVN 190
Query: 207 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLEL 266
+ DMWS+G + ++ PF G + L ++ V Y E
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANVSAV-----------NYEFED 238
Query: 267 DPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 325
+ F N S A DF+ +LL D + R+T ++++ HP+
Sbjct: 239 E----------------YFSNT------SALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 119/301 (39%), Gaps = 45/301 (14%)
Query: 38 DDYEVVRKV-GRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGGPNVV 96
DDY+V +V G G +V + N T E+ + C P++V
Sbjct: 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC--PHIV 74
Query: 97 KLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYI----YELLK----ALDYC 148
+++D+ + ++ L+ + D L+ + D + + E++K A+ Y
Sbjct: 75 RIVDVYENLYAGRKCLLI-VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 133
Query: 149 HSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 206
HS I HRDVKP N++ + L+L D+G A+ + Y+ PE+L
Sbjct: 134 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL-G 192
Query: 207 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLEL 266
+ YD S DMWSLG + ++ PF+ H L +
Sbjct: 193 PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG-------------------------LAI 227
Query: 267 DPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFA 326
P + + R +F N + VS E + LL+ + R+T E M HP+
Sbjct: 228 SPGMKTRI----RMGQYEFPNPEWSE-VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM 282
Query: 327 Q 327
Q
Sbjct: 283 Q 283
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 125/304 (41%), Gaps = 44/304 (14%)
Query: 34 FSDQDDYEVVRKV-GRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
++ DDY++ ++V G G +V E + T ++C GG
Sbjct: 5 YAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHW--QASGG 62
Query: 93 PNVVKLLDIVRDQHSKTPSL--IFEYVNSTD-FKVLYP----TLTDYDIRYYIYELLKAL 145
P++V +LD+ + H L I E + + F + T+ + + ++ A+
Sbjct: 63 PHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAI 122
Query: 146 DYCHSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 203
+ HS I HRDVKP N++ + + L+L D+G A+ + Y+ PE+
Sbjct: 123 QFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK-ETTQNALQTPCYTPYYVAPEV 181
Query: 204 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYH 263
L + YD S DMWSLG + ++ PF+ N Q + + L +Y
Sbjct: 182 L-GPEKYDKSCDMWSLGVIMYILLCGFPPFY---SNTGQAISPGM-----KRRIRLGQYG 232
Query: 264 LELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHP 323
+P+ WS+ VS +A + LL+ D +RLT + M HP
Sbjct: 233 FP-NPE------------WSE---------VSEDAKQLIRLLLKTDPTERLTITQFMNHP 270
Query: 324 YFAQ 327
+ Q
Sbjct: 271 WINQ 274
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 123/300 (41%), Gaps = 44/300 (14%)
Query: 38 DDYEVVRKV-GRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGGPNVV 96
DDY++ ++V G G +V E + T ++C GGP++V
Sbjct: 28 DDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHW--QASGGPHIV 85
Query: 97 KLLDIVRDQHSKTPSL--IFEYVNSTD-FKVLYP----TLTDYDIRYYIYELLKALDYCH 149
+LD+ + H L I E + + F + T+ + + ++ A+ + H
Sbjct: 86 CILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH 145
Query: 150 SQGIMHRDVKPHNVMIDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDL 207
S I HRDVKP N++ + + L+L D+G A+ + Y+ PE+L
Sbjct: 146 SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK-ETTQNALQTPCYTPYYVAPEVL-GP 203
Query: 208 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELD 267
+ YD S DMWSLG + ++ PF+ N Q + + L +Y +
Sbjct: 204 EKYDKSCDMWSLGVIMYILLCGFPPFY---SNTGQAISPGM-----KRRIRLGQYGFP-N 254
Query: 268 PQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQ 327
P+ WS+ VS +A + LL+ D +RLT + M HP+ Q
Sbjct: 255 PE------------WSE---------VSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQ 293
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 119/301 (39%), Gaps = 45/301 (14%)
Query: 38 DDYEVVRKV-GRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGGPNVV 96
DDY+V +V G G +V + N T E+ + C P++V
Sbjct: 67 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC--PHIV 124
Query: 97 KLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYI----YELLK----ALDYC 148
+++D+ + ++ L+ + D L+ + D + + E++K A+ Y
Sbjct: 125 RIVDVYENLYAGRKCLLI-VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 183
Query: 149 HSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 206
HS I HRDVKP N++ + L+L D+G A+ + Y+ PE+L
Sbjct: 184 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL-G 242
Query: 207 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLEL 266
+ YD S DMWSLG + ++ PF+ H L +
Sbjct: 243 PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG-------------------------LAI 277
Query: 267 DPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFA 326
P + + R +F N + VS E + LL+ + R+T E M HP+
Sbjct: 278 SPGMKTRI----RMGQYEFPNPEWSE-VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM 332
Query: 327 Q 327
Q
Sbjct: 333 Q 333
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 73/147 (49%), Gaps = 12/147 (8%)
Query: 93 PNVVKLLDIVRDQHSKTPS---LIFEYVNST---DFKVLYPTLTDYDIRYYIYELLKALD 146
P+++KL ++ TP+ ++ EYV+ D+ + + + + R ++L A+D
Sbjct: 71 PHIIKLYQVI-----STPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVD 125
Query: 147 YCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 206
YCH ++HRD+KP NV++D + ++ D+GL+ G+ S + PE++
Sbjct: 126 YCHRHMVVHRDLKPENVLLDAHMNA-KIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISG 184
Query: 207 LQDYDYSLDMWSLGCMFAGMIFRKEPF 233
+D+WS G + ++ PF
Sbjct: 185 RLYAGPEVDIWSCGVILYALLCGTLPF 211
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 22/197 (11%)
Query: 134 IRYYIYELLKALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR 192
I+ I +L + Y H++ I HRDVKP N+++D R ++L D+G +E Y K+
Sbjct: 153 IKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGR-VKLSDFGESE-YMVDKKIKGS 210
Query: 193 VASRYFKGPELLVDLQDYDYS-LDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG 251
+ F PE + Y+ + +D+WSLG M + PF LV++ +
Sbjct: 211 RGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKI----SLVELFNNIR 266
Query: 252 TDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQ 311
T + L++ H L L + S + + +S E IDFL LR +
Sbjct: 267 TKNIEYPLDRNHF-----LYPLTNKKS---------TCSNNFLSNEDIDFLKLFLRKNPA 312
Query: 312 DRLTAREAMAHPYFAQV 328
+R+T+ +A+ H + A
Sbjct: 313 ERITSEDALKHEWLADT 329
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 66/125 (52%), Gaps = 19/125 (15%)
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH-------------PG 186
++L+AL Y HSQGI+HR++KP N+ ID E R +++ D+GLA+ H PG
Sbjct: 124 QILEALSYIHSQGIIHRNLKPXNIFID-ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 187 KEYNVR--VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLV 244
N+ + + + E+L Y+ +D +SLG +F I+ PF G + + L
Sbjct: 183 SSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIY---PFSTGXERVNILK 239
Query: 245 KIAKV 249
K+ V
Sbjct: 240 KLRSV 244
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 90/205 (43%), Gaps = 22/205 (10%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIF---EYVNST---DFKVLYPTLTDYDIRYYIYELLKALD 146
P+++KL ++ TPS IF EYV+ D+ L + + R ++L +D
Sbjct: 76 PHIIKLYQVI-----STPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVD 130
Query: 147 YCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 206
YCH ++HRD+KP NV++D + ++ D+GL+ G+ S + PE++
Sbjct: 131 YCHRHMVVHRDLKPENVLLDAHMNA-KIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISG 189
Query: 207 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLN------ 260
+D+WS G + ++ PF D+H + G YLN
Sbjct: 190 RLYAGPEVDIWSSGVILYALLCGTLPF---DDDHVPTLFKKICDGIFYTPQYLNPSVISL 246
Query: 261 -KYHLELDPQLDALVGRHSRKPWSK 284
K+ L++DP A + W K
Sbjct: 247 LKHMLQVDPMKRATIKDIREHEWFK 271
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 123/301 (40%), Gaps = 45/301 (14%)
Query: 38 DDYEVVRKV-GRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGGPNVV 96
DDY+V +V G G +V + N T E+ + C P++V
Sbjct: 15 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC--PHIV 72
Query: 97 KLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYI----YELLK----ALDYC 148
+++D+ + ++ L+ + D L+ + D + + E++K A+ Y
Sbjct: 73 RIVDVYENLYAGRKCLLI-VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 131
Query: 149 HSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 206
HS I HRDVKP N++ + L+L D+G A+ + Y+ PE+L
Sbjct: 132 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPEVL-G 190
Query: 207 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLEL 266
+ YD S DMWSLG + ++ PF+ H + I+ + T + +Y
Sbjct: 191 PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG-----LAISPGMKT---RIRMGQYEFP- 241
Query: 267 DPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFA 326
+P+ WS+ VS E + LL+ + R+T E M HP+
Sbjct: 242 NPE------------WSE---------VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM 280
Query: 327 Q 327
Q
Sbjct: 281 Q 281
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 104/238 (43%), Gaps = 43/238 (18%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNST---DFKVLYPTLTDYDIRYYIYELLKALDYCH 149
PNV+ L ++ ++ LI E V DF +LT+ + ++ ++L + Y H
Sbjct: 74 PNVITLHEVYENKTDVI--LIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 150 SQGIMHRDVKPHNVM-IDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 206
S I H D+KP N+M +D + K +++ID+GLA G E+ + F PE +V+
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE-IVN 190
Query: 207 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLEL 266
+ DMWS+G + ++ PF G + L ++ V Y E
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANVSAV-----------NYEFED 238
Query: 267 DPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPY 324
+ F N S A DF+ +LL D + R+T ++++ HP+
Sbjct: 239 E----------------YFSN------TSALAKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 103/245 (42%), Gaps = 46/245 (18%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDF--KVL--YPTLTDYDIRYYIYELLKALDYC 148
P +V L D D + +I+E+++ + KV + +++ + Y+ ++ K L +
Sbjct: 214 PTLVNLHDAFEDDNEMV--MIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHM 271
Query: 149 HSQGIMHRDVKPHNVM-IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDL 207
H +H D+KP N+M +L+LID+GL P + V + F PE + +
Sbjct: 272 HENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPE-VAEG 330
Query: 208 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELD 267
+ Y DMWS+G + ++ PF G +N D+ ++ K D
Sbjct: 331 KPVGYYTDMWSVGVLSYILLSGLSPF--GGENDDETLRNVK----------------SCD 372
Query: 268 PQLD--ALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 325
+D A G +S + DF+ KLL D R+T +A+ HP+
Sbjct: 373 WNMDDSAFSG------------------ISEDGKDFIRKLLLADPNTRMTIHQALEHPWL 414
Query: 326 AQVRA 330
A
Sbjct: 415 TPGNA 419
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 72/143 (50%), Gaps = 22/143 (15%)
Query: 111 SLIFEYVNSTDFKVLYPTLTDYDIRYYIY-------------------ELLKALDYCHSQ 151
SL + + TD ++ + DIRY+IY +++ L++ H +
Sbjct: 249 SLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR 308
Query: 152 GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA-SRYFKGPELLVDLQDY 210
I++RD+KP NV++D + +R+ D GLA G+ A + F PELL+ ++Y
Sbjct: 309 NIIYRDLKPENVLLDDD-GNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG-EEY 366
Query: 211 DYSLDMWSLGCMFAGMIFRKEPF 233
D+S+D ++LG MI + PF
Sbjct: 367 DFSVDYFALGVTLYEMIAARGPF 389
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 72/143 (50%), Gaps = 22/143 (15%)
Query: 111 SLIFEYVNSTDFKVLYPTLTDYDIRYYIY-------------------ELLKALDYCHSQ 151
SL + + TD ++ + DIRY+IY +++ L++ H +
Sbjct: 249 SLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR 308
Query: 152 GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA-SRYFKGPELLVDLQDY 210
I++RD+KP NV++D + +R+ D GLA G+ A + F PELL+ ++Y
Sbjct: 309 NIIYRDLKPENVLLDDD-GNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG-EEY 366
Query: 211 DYSLDMWSLGCMFAGMIFRKEPF 233
D+S+D ++LG MI + PF
Sbjct: 367 DFSVDYFALGVTLYEMIAARGPF 389
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 72/143 (50%), Gaps = 22/143 (15%)
Query: 111 SLIFEYVNSTDFKVLYPTLTDYDIRYYIY-------------------ELLKALDYCHSQ 151
SL + + TD ++ + DIRY+IY +++ L++ H +
Sbjct: 249 SLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR 308
Query: 152 GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA-SRYFKGPELLVDLQDY 210
I++RD+KP NV++D + +R+ D GLA G+ A + F PELL+ ++Y
Sbjct: 309 NIIYRDLKPENVLLDDD-GNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG-EEY 366
Query: 211 DYSLDMWSLGCMFAGMIFRKEPF 233
D+S+D ++LG MI + PF
Sbjct: 367 DFSVDYFALGVTLYEMIAARGPF 389
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 103/242 (42%), Gaps = 47/242 (19%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYV--NSTDF-KVLYPTLTDYDIRYYIYELLKALDYCH 149
PN ++ +H T L+ EY +++D +V L + +I + L+ L Y H
Sbjct: 114 PNTIQYRGCYLREH--TAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH 171
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE--LLVDL 207
S ++HRDVK N+++ E ++L D+G A P N V + Y+ PE L +D
Sbjct: 172 SHNMIHRDVKAGNILLS-EPGLVKLGDFGSASIMAPA---NXFVGTPYWMAPEVILAMDE 227
Query: 208 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELD 267
YD +D+WSLG + RK P F +NA YH+ +
Sbjct: 228 GQYDGKVDVWSLGITCIELAERKPPLF-------------------NMNAMSALYHIAQN 268
Query: 268 PQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQ 327
+ AL H WS++ +F+D L+ QDR T+ + H + +
Sbjct: 269 -ESPALQSGH----WSEYFR------------NFVDSCLQKIPQDRPTSEVLLKHRFVLR 311
Query: 328 VR 329
R
Sbjct: 312 ER 313
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 72/143 (50%), Gaps = 22/143 (15%)
Query: 111 SLIFEYVNSTDFKVLYPTLTDYDIRYYIY-------------------ELLKALDYCHSQ 151
SL + + TD ++ + DIRY+IY +++ L++ H +
Sbjct: 249 SLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR 308
Query: 152 GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA-SRYFKGPELLVDLQDY 210
I++RD+KP NV++D + +R+ D GLA G+ A + F PELL+ ++Y
Sbjct: 309 NIIYRDLKPENVLLDDD-GNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG-EEY 366
Query: 211 DYSLDMWSLGCMFAGMIFRKEPF 233
D+S+D ++LG MI + PF
Sbjct: 367 DFSVDYFALGVTLYEMIAARGPF 389
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 103/245 (42%), Gaps = 46/245 (18%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDF--KVL--YPTLTDYDIRYYIYELLKALDYC 148
P +V L D D + +I+E+++ + KV + +++ + Y+ ++ K L +
Sbjct: 108 PTLVNLHDAFEDDNEMV--MIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHM 165
Query: 149 HSQGIMHRDVKPHNVM-IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDL 207
H +H D+KP N+M +L+LID+GL P + V + F PE + +
Sbjct: 166 HENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPE-VAEG 224
Query: 208 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELD 267
+ Y DMWS+G + ++ PF G +N D+ ++ K D
Sbjct: 225 KPVGYYTDMWSVGVLSYILLSGLSPF--GGENDDETLRNVK----------------SCD 266
Query: 268 PQLD--ALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 325
+D A G +S + DF+ KLL D R+T +A+ HP+
Sbjct: 267 WNMDDSAFSG------------------ISEDGKDFIRKLLLADPNTRMTIHQALEHPWL 308
Query: 326 AQVRA 330
A
Sbjct: 309 TPGNA 313
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 129/312 (41%), Gaps = 59/312 (18%)
Query: 40 YEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNL--CGGPNVVK 97
+E+V ++G G + +V++ N T ++ L C P +VK
Sbjct: 13 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVK 72
Query: 98 LLDIVRDQHSKTPSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKALDYCHSQGI 153
LL H ++ E+ + LT+ I+ ++L+AL++ HS+ I
Sbjct: 73 LLGAY--YHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRI 130
Query: 154 MHRDVKPHNVMIDHELRKLRLIDWGL-AEFYHPGKEYNVRVASRYFKGPELLV--DLQD- 209
+HRD+K NV++ E +RL D+G+ A+ ++ + + + Y+ PE+++ ++D
Sbjct: 131 IHRDLKAGNVLMTLE-GDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDT 189
Query: 210 -YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDP 268
YDY D+WSLG M A + H EL+P
Sbjct: 190 PYDYKADIWSLGITLIEM------------------------------AQIEPPHHELNP 219
Query: 269 QLDALVGRHSRKPWSKFINADNQHLVSP-----EAIDFLDKLLRYDHQDRLTAREAMAHP 323
L K +D L++P E DFL L + + R +A + + HP
Sbjct: 220 MRVLL----------KIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHP 269
Query: 324 YFAQVRAAESSR 335
+ + + + ++ R
Sbjct: 270 FVSSITSNKALR 281
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 104/248 (41%), Gaps = 54/248 (21%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRY------YIYELLK--- 143
PN++K+ ++ D H+ ++ + + + L + R Y+ EL+K
Sbjct: 80 PNIIKIFEVFEDYHN-----MYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMM 134
Query: 144 -ALDYCHSQGIMHRDVKPHNVMIDHEL--RKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 200
AL Y HSQ ++H+D+KP N++ +++ID+GLAE + + + +
Sbjct: 135 NALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMA 194
Query: 201 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLN 260
PE+ +D + D+WS G + ++ PF L ++ + E N
Sbjct: 195 PEVFK--RDVTFKCDIWSAGVVMYFLLTGCLPF-----TGTSLEEVQQKATYKEPN---- 243
Query: 261 KYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAM 320
Y +E P ++P+A+D L ++L D + R +A + +
Sbjct: 244 -YAVECRP-------------------------LTPQAVDLLKQMLTKDPERRPSAAQVL 277
Query: 321 AHPYFAQV 328
H +F Q
Sbjct: 278 HHEWFKQA 285
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 105/242 (43%), Gaps = 47/242 (19%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYV--NSTDF-KVLYPTLTDYDIRYYIYELLKALDYCH 149
PN ++ +H T L+ EY +++D +V L + +I + L+ L Y H
Sbjct: 75 PNTIQYRGCYLREH--TAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH 132
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
S ++HRDVK N+++ E ++L D+G A P N V + Y+ PE+++ + +
Sbjct: 133 SHNMIHRDVKAGNILLS-EPGLVKLGDFGSASIMAPA---NXFVGTPYWMAPEVILAMDE 188
Query: 210 --YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELD 267
YD +D+WSLG + RK P F +NA YH+ +
Sbjct: 189 GQYDGKVDVWSLGITCIELAERKPPLF-------------------NMNAMSALYHIAQN 229
Query: 268 PQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQ 327
+ AL H WS++ +F+D L+ QDR T+ + H + +
Sbjct: 230 -ESPALQSGH----WSEYFR------------NFVDSCLQKIPQDRPTSEVLLKHRFVLR 272
Query: 328 VR 329
R
Sbjct: 273 ER 274
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 93/197 (47%), Gaps = 13/197 (6%)
Query: 43 VRKVGRGKYSEVFEGINVNTNERCXXXX---XXXXXXXXXXXXXXXLQNLCGGPNVVKLL 99
+ K+G+G + EVF+GI+ T + + + C P V K
Sbjct: 12 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 71
Query: 100 -DIVRDQHSKTPSLIFEYVNS-TDFKVLYP-TLTDYDIRYYIYELLKALDYCHSQGIMHR 156
++D +I EY+ + +L P L + I + E+LK LDY HS+ +HR
Sbjct: 72 GSYLKDTKL---WIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHR 128
Query: 157 DVKPHNVMIDHELRKLRLIDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLD 215
D+K NV++ E +++L D+G+A + + N V + ++ PE ++ YD D
Sbjct: 129 DIKAANVLLS-EHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPE-VIKQSAYDSKAD 186
Query: 216 MWSLGCMFAGMIFRKEP 232
+WSLG + A + R EP
Sbjct: 187 IWSLG-ITAIELARGEP 202
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 129/312 (41%), Gaps = 59/312 (18%)
Query: 40 YEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNL--CGGPNVVK 97
+E+V ++G G + +V++ N T ++ L C P +VK
Sbjct: 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVK 80
Query: 98 LLDIVRDQHSKTPSLIFEYVNSTDFKVLY----PTLTDYDIRYYIYELLKALDYCHSQGI 153
LL H ++ E+ + LT+ I+ ++L+AL++ HS+ I
Sbjct: 81 LLGAY--YHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRI 138
Query: 154 MHRDVKPHNVMIDHELRKLRLIDWGL-AEFYHPGKEYNVRVASRYFKGPELLV--DLQD- 209
+HRD+K NV++ E +RL D+G+ A+ ++ + + + Y+ PE+++ ++D
Sbjct: 139 IHRDLKAGNVLMTLE-GDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDT 197
Query: 210 -YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDP 268
YDY D+WSLG M A + H EL+P
Sbjct: 198 PYDYKADIWSLGITLIEM------------------------------AQIEPPHHELNP 227
Query: 269 QLDALVGRHSRKPWSKFINADNQHLVSP-----EAIDFLDKLLRYDHQDRLTAREAMAHP 323
L K +D L++P E DFL L + + R +A + + HP
Sbjct: 228 MRVLL----------KIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHP 277
Query: 324 YFAQVRAAESSR 335
+ + + + ++ R
Sbjct: 278 FVSSITSNKALR 289
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 46/206 (22%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA-EFYHPGK 187
T+ R+Y E++ AL+Y HS+ +++RD+K N+M+D + +++ D+GL E G
Sbjct: 102 FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGA 160
Query: 188 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 247
+ + PE+L D DY ++D W LG + M+ + PF+ + +H++L ++
Sbjct: 161 TMKTFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFY--NQDHERLFEL- 216
Query: 248 KVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLR 307
++ R P + +SPEA L LL+
Sbjct: 217 -------------------------ILMEEIRFPRT----------LSPEAKSLLAGLLK 241
Query: 308 YDHQDRLT-----AREAMAHPYFAQV 328
D + RL A+E M H +F +
Sbjct: 242 KDPKQRLGGGPSDAKEVMEHRFFLSI 267
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 97/209 (46%), Gaps = 16/209 (7%)
Query: 34 FSDQDDYEV---VRKVGRGKYSEVFEGINVNTNERCXXXX---XXXXXXXXXXXXXXXLQ 87
F D E+ + K+G+G + EVF+GI+ T + +
Sbjct: 20 FQSMDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVL 79
Query: 88 NLCGGPNVVKLL-DIVRDQHSKTPSLIFEYVNS-TDFKVLYP-TLTDYDIRYYIYELLKA 144
+ C P V K ++D +I EY+ + +L P L + I + E+LK
Sbjct: 80 SQCDSPYVTKYYGSYLKDTKL---WIIMEYLGGGSALDLLEPGPLDETQIATILREILKG 136
Query: 145 LDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA-EFYHPGKEYNVRVASRYFKGPEL 203
LDY HS+ +HRD+K NV++ E +++L D+G+A + + N V + ++ PE
Sbjct: 137 LDYLHSEKKIHRDIKAANVLLS-EHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPE- 194
Query: 204 LVDLQDYDYSLDMWSLGCMFAGMIFRKEP 232
++ YD D+WSLG + A + R EP
Sbjct: 195 VIKQSAYDSKADIWSLG-ITAIELARGEP 222
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 46/206 (22%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA-EFYHPGK 187
T+ R+Y E++ AL+Y HS+ +++RD+K N+M+D + +++ D+GL E G
Sbjct: 105 FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGA 163
Query: 188 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 247
+ + PE+L D DY ++D W LG + M+ + PF+ + +H++L ++
Sbjct: 164 TMKTFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFY--NQDHERLFEL- 219
Query: 248 KVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLR 307
++ R P + +SPEA L LL+
Sbjct: 220 -------------------------ILMEEIRFPRT----------LSPEAKSLLAGLLK 244
Query: 308 YDHQDRLT-----AREAMAHPYFAQV 328
D + RL A+E M H +F +
Sbjct: 245 KDPKQRLGGGPSDAKEVMEHRFFLSI 270
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 12/205 (5%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXX---XXXXXXXXLQNLCGGPN 94
+D+++V+ +G G Y EV +N T E + + N
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHEN 65
Query: 95 VVKLLDIVRDQHSKTPSLIFEYVNSTD-FKVLYP--TLTDYDIRYYIYELLKALDYCHSQ 151
VVK R+ + + L EY + + F + P + + D + + ++L+ + Y H
Sbjct: 66 VVKFYGHRREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 152 GIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKE--YNVRVASRYFKGPELLVDLQ 208
GI HRD+KP N+++D E L++ D+GLA F + +E N + + PELL +
Sbjct: 124 GITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 209 DYDYSLDMWSLGCMFAGMIFRKEPF 233
+ +D+WS G + M+ + P+
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 12/205 (5%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXX---XXXXXXXXLQNLCGGPN 94
+D+++V+ +G G Y EV +N T E + + N
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 95 VVKLLDIVRDQHSKTPSLIFEYVNSTD-FKVLYP--TLTDYDIRYYIYELLKALDYCHSQ 151
VVK R+ + + L EY + + F + P + + D + + ++L+ + Y H
Sbjct: 67 VVKFYGHRREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 152 GIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKE--YNVRVASRYFKGPELLVDLQ 208
GI HRD+KP N+++D E L++ D+GLA F + +E N + + PELL +
Sbjct: 125 GITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 209 DYDYSLDMWSLGCMFAGMIFRKEPF 233
+ +D+WS G + M+ + P+
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 46/206 (22%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA-EFYHPGK 187
T+ R+Y E++ AL+Y HS+ +++RD+K N+M+D + +++ D+GL E G
Sbjct: 102 FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGA 160
Query: 188 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 247
+ + PE+L D DY ++D W LG + M+ + PF+ + +H++L ++
Sbjct: 161 TMKTFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFY--NQDHERLFEL- 216
Query: 248 KVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLR 307
++ R P + +SPEA L LL+
Sbjct: 217 -------------------------ILMEEIRFPRT----------LSPEAKSLLAGLLK 241
Query: 308 YDHQDRLT-----AREAMAHPYFAQV 328
D + RL A+E M H +F +
Sbjct: 242 KDPKQRLGGGPSDAKEVMEHRFFLSI 267
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 12/205 (5%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXX---XXXXXXXXLQNLCGGPN 94
+D+++V+ +G G Y EV +N T E + + N
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 95 VVKLLDIVRDQHSKTPSLIFEYVNSTD-FKVLYP--TLTDYDIRYYIYELLKALDYCHSQ 151
VVK R+ + + L EY + + F + P + + D + + ++L+ + Y H
Sbjct: 66 VVKFYGHRREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 152 GIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKE--YNVRVASRYFKGPELLVDLQ 208
GI HRD+KP N+++D E L++ D+GLA F + +E N + + PELL +
Sbjct: 124 GITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 209 DYDYSLDMWSLGCMFAGMIFRKEPF 233
+ +D+WS G + M+ + P+
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 70/151 (46%), Gaps = 15/151 (9%)
Query: 91 GGPNVVKLLDIVRDQHS-------KTPSL-IFEYVNSTDFKVLYPTLTDYDIRYYIYELL 142
G P V++LLD Q P+ +F+Y+ L + R + +++
Sbjct: 96 GHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKG------PLGEGPSRCFFGQVV 149
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 202
A+ +CHS+G++HRD+K N++ID +LID+G H + Y +R + PE
Sbjct: 150 AAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLH-DEPYTDFDGTRVYSPPE 208
Query: 203 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 233
+ Q + +WSLG + M+ PF
Sbjct: 209 WISRHQYHALPATVWSLGILLYDMVCGDIPF 239
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 12/205 (5%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXX---XXXXXXXXLQNLCGGPN 94
+D+++V+ +G G Y EV +N T E + + N
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 95 VVKLLDIVRDQHSKTPSLIFEYVNSTD-FKVLYP--TLTDYDIRYYIYELLKALDYCHSQ 151
VVK R+ + + L EY + + F + P + + D + + ++L+ + Y H
Sbjct: 67 VVKFYGHRREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 152 GIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKE--YNVRVASRYFKGPELLVDLQ 208
GI HRD+KP N+++D E L++ D+GLA F + +E N + + PELL +
Sbjct: 125 GITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 209 DYDYSLDMWSLGCMFAGMIFRKEPF 233
+ +D+WS G + M+ + P+
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 12/205 (5%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXX---XXXXXXXXLQNLCGGPN 94
+D+++V+ +G G Y EV +N T E + + N
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHEN 65
Query: 95 VVKLLDIVRDQHSKTPSLIFEYVNSTD-FKVLYP--TLTDYDIRYYIYELLKALDYCHSQ 151
VVK R+ + + L EY + + F + P + + D + + ++L+ + Y H
Sbjct: 66 VVKFYGHRREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 152 GIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKE--YNVRVASRYFKGPELLVDLQ 208
GI HRD+KP N+++D E L++ D+GLA F + +E N + + PELL +
Sbjct: 124 GITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 209 DYDYSLDMWSLGCMFAGMIFRKEPF 233
+ +D+WS G + M+ + P+
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 12/205 (5%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXX---XXXXXXXXLQNLCGGPN 94
+D+++V+ +G G Y EV +N T E + + N
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 95 VVKLLDIVRDQHSKTPSLIFEYVNSTD-FKVLYP--TLTDYDIRYYIYELLKALDYCHSQ 151
VVK R+ + + L EY + + F + P + + D + + ++L+ + Y H
Sbjct: 66 VVKFYGHRREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 152 GIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKE--YNVRVASRYFKGPELLVDLQ 208
GI HRD+KP N+++D E L++ D+GLA F + +E N + + PELL +
Sbjct: 124 GITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 209 DYDYSLDMWSLGCMFAGMIFRKEPF 233
+ +D+WS G + M+ + P+
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 12/205 (5%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXX---XXXXXXXXLQNLCGGPN 94
+D+++V+ +G G Y EV +N T E + + N
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 95 VVKLLDIVRDQHSKTPSLIFEYVNSTD-FKVLYP--TLTDYDIRYYIYELLKALDYCHSQ 151
VVK R+ + + L EY + + F + P + + D + + ++L+ + Y H
Sbjct: 66 VVKFYGHRREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 152 GIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKE--YNVRVASRYFKGPELLVDLQ 208
GI HRD+KP N+++D E L++ D+GLA F + +E N + + PELL +
Sbjct: 124 GITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 209 DYDYSLDMWSLGCMFAGMIFRKEPF 233
+ +D+WS G + M+ + P+
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 12/205 (5%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXX---XXXXXXXXLQNLCGGPN 94
+D+++V+ +G G Y EV +N T E + + N
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 95 VVKLLDIVRDQHSKTPSLIFEYVNSTD-FKVLYP--TLTDYDIRYYIYELLKALDYCHSQ 151
VVK R+ + + L EY + + F + P + + D + + ++L+ + Y H
Sbjct: 67 VVKFYGHRREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 152 GIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKE--YNVRVASRYFKGPELLVDLQ 208
GI HRD+KP N+++D E L++ D+GLA F + +E N + + PELL +
Sbjct: 125 GITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 209 DYDYSLDMWSLGCMFAGMIFRKEPF 233
+ +D+WS G + M+ + P+
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 12/205 (5%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXX---XXXXXXXXLQNLCGGPN 94
+D+++V+ +G G Y EV +N T E + + N
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 95 VVKLLDIVRDQHSKTPSLIFEYVNSTD-FKVLYP--TLTDYDIRYYIYELLKALDYCHSQ 151
VVK R+ + + L EY + + F + P + + D + + ++L+ + Y H
Sbjct: 67 VVKFYGHRREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 152 GIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKE--YNVRVASRYFKGPELLVDLQ 208
GI HRD+KP N+++D E L++ D+GLA F + +E N + + PELL +
Sbjct: 125 GITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 209 DYDYSLDMWSLGCMFAGMIFRKEPF 233
+ +D+WS G + M+ + P+
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 12/205 (5%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXX---XXXXXXXXLQNLCGGPN 94
+D+++V+ +G G Y EV +N T E + + N
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHEN 66
Query: 95 VVKLLDIVRDQHSKTPSLIFEYVNSTD-FKVLYP--TLTDYDIRYYIYELLKALDYCHSQ 151
VVK R+ + + L EY + + F + P + + D + + ++L+ + Y H
Sbjct: 67 VVKFYGHRREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 152 GIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKE--YNVRVASRYFKGPELLVDLQ 208
GI HRD+KP N+++D E L++ D+GLA F + +E N + + PELL +
Sbjct: 125 GITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 183
Query: 209 DYDYSLDMWSLGCMFAGMIFRKEPF 233
+ +D+WS G + M+ + P+
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 12/205 (5%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXX---XXXXXXXXLQNLCGGPN 94
+D+++V+ +G G Y EV +N T E + + N
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 95 VVKLLDIVRDQHSKTPSLIFEYVNSTD-FKVLYP--TLTDYDIRYYIYELLKALDYCHSQ 151
VVK R+ + + L EY + + F + P + + D + + ++L+ + Y H
Sbjct: 67 VVKFYGHRREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 152 GIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKE--YNVRVASRYFKGPELLVDLQ 208
GI HRD+KP N+++D E L++ D+GLA F + +E N + + PELL +
Sbjct: 125 GITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 209 DYDYSLDMWSLGCMFAGMIFRKEPF 233
+ +D+WS G + M+ + P+
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 12/205 (5%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXX---XXXXXXXXLQNLCGGPN 94
+D+++V+ +G G Y EV +N T E + + N
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 95 VVKLLDIVRDQHSKTPSLIFEYVNSTD-FKVLYP--TLTDYDIRYYIYELLKALDYCHSQ 151
VVK R+ + + L EY + + F + P + + D + + ++L+ + Y H
Sbjct: 66 VVKFYGHRREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 152 GIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKE--YNVRVASRYFKGPELLVDLQ 208
GI HRD+KP N+++D E L++ D+GLA F + +E N + + PELL +
Sbjct: 124 GITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 209 DYDYSLDMWSLGCMFAGMIFRKEPF 233
+ +D+WS G + M+ + P+
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 12/205 (5%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXX---XXXXXXXXLQNLCGGPN 94
+D+++V+ +G G Y EV +N T E + + N
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 95 VVKLLDIVRDQHSKTPSLIFEYVNSTD-FKVLYP--TLTDYDIRYYIYELLKALDYCHSQ 151
VVK R+ + + L EY + + F + P + + D + + ++L+ + Y H
Sbjct: 66 VVKFYGHRREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 152 GIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKE--YNVRVASRYFKGPELLVDLQ 208
GI HRD+KP N+++D E L++ D+GLA F + +E N + + PELL +
Sbjct: 124 GITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 209 DYDYSLDMWSLGCMFAGMIFRKEPF 233
+ +D+WS G + M+ + P+
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 97/214 (45%), Gaps = 12/214 (5%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXX---XXXXXXXXLQNLCGGPN 94
+D+++V+ +G G Y EV +N T E + + N
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 95 VVKLLDIVRDQHSKTPSLIFEYVNSTD-FKVLYP--TLTDYDIRYYIYELLKALDYCHSQ 151
VVK R+ + + L EY + + F + P + + D + + ++L+ + Y H
Sbjct: 66 VVKFYGHRREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 152 GIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKE--YNVRVASRYFKGPELLVDLQ 208
GI HRD+KP N+++D E L++ D+GLA F + +E N + + PELL +
Sbjct: 124 GITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 209 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQ 242
+ +D+WS G + M+ + P+ D+ +
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQE 216
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 12/205 (5%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXX---XXXXXXXXLQNLCGGPN 94
+D+++V+ +G G Y EV +N T E + + N
Sbjct: 5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 64
Query: 95 VVKLLDIVRDQHSKTPSLIFEYVNSTD-FKVLYP--TLTDYDIRYYIYELLKALDYCHSQ 151
VVK R+ + + L EY + + F + P + + D + + ++L+ + Y H
Sbjct: 65 VVKFYGHRREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 122
Query: 152 GIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKE--YNVRVASRYFKGPELLVDLQ 208
GI HRD+KP N+++D E L++ D+GLA F + +E N + + PELL +
Sbjct: 123 GITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 181
Query: 209 DYDYSLDMWSLGCMFAGMIFRKEPF 233
+ +D+WS G + M+ + P+
Sbjct: 182 FHAEPVDVWSCGIVLTAMLAGELPW 206
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 93/197 (47%), Gaps = 13/197 (6%)
Query: 43 VRKVGRGKYSEVFEGINVNTNERCXXXX---XXXXXXXXXXXXXXXLQNLCGGPNVVKLL 99
+ K+G+G + EVF+GI+ T + + + C P V K
Sbjct: 27 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 86
Query: 100 -DIVRDQHSKTPSLIFEYVNS-TDFKVLYP-TLTDYDIRYYIYELLKALDYCHSQGIMHR 156
++D +I EY+ + +L P L + I + E+LK LDY HS+ +HR
Sbjct: 87 GSYLKDTKL---WIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHR 143
Query: 157 DVKPHNVMIDHELRKLRLIDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLD 215
D+K NV++ E +++L D+G+A + + N V + ++ PE ++ YD D
Sbjct: 144 DIKAANVLLS-EHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPE-VIKQSAYDSKAD 201
Query: 216 MWSLGCMFAGMIFRKEP 232
+WSLG + A + R EP
Sbjct: 202 IWSLG-ITAIELARGEP 217
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 125/300 (41%), Gaps = 47/300 (15%)
Query: 38 DDYEVVRKVGRGKYSEVFEGIN-VNTNERCXXXXXXXXXXXXXXXXXXXLQNLC---GGP 93
DDY++ ++G+G +S V + T E +C P
Sbjct: 31 DDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 90
Query: 94 NVVKLLDIVRDQHSKTPSLIFEYVNSTDF---KVLYPTLTDYDIRYYIYELLKALDYCHS 150
N+V+L D + ++ L+F+ V + V ++ D + I+++L+++++ H
Sbjct: 91 NIVRLHDSISEEGFHY--LVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQ 148
Query: 151 QGIMHRDVKPHNVMIDHELR--KLRLIDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDL 207
I+HRD+KP N+++ + + ++L D+GLA E + + + + PE+L
Sbjct: 149 HDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRK- 207
Query: 208 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELD 267
Y +D+W+ G + ++ P F+ D H +L
Sbjct: 208 DPYGKPVDIWACGVILY-ILLVGYPPFWDEDQH------------------------KLY 242
Query: 268 PQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQ 327
Q+ A W V+PEA + ++++L + R+TA +A+ HP+ Q
Sbjct: 243 QQIKAGAYDFPSPEWDT---------VTPEAKNLINQMLTINPAKRITADQALKHPWVCQ 293
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 82/198 (41%), Gaps = 41/198 (20%)
Query: 136 YYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVAS 195
+Y E+ L+ H + I++RD+KP N+++D +R+ D GLA G+ RV +
Sbjct: 290 FYAAEICCGLEDLHRERIVYRDLKPENILLDDH-GHIRISDLGLAVHVPEGQTIKGRVGT 348
Query: 196 RYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDEL 255
+ PE++ + + Y +S D W+LGC+ MI + PF
Sbjct: 349 VGYMAPEVVKN-ERYTFSPDWWALGCLLYEMIAGQSPF---------------------- 385
Query: 256 NAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRL- 314
Q + R + K + + SP+A +LL D +RL
Sbjct: 386 ------------QQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLG 433
Query: 315 ----TAREAMAHPYFAQV 328
+ARE HP F ++
Sbjct: 434 CRGGSAREVKEHPLFKKL 451
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 12/205 (5%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXX---XXXXXXXXLQNLCGGPN 94
+D+++V+ +G G Y EV +N T E + + N
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 95 VVKLLDIVRDQHSKTPSLIFEYVNSTD-FKVLYP--TLTDYDIRYYIYELLKALDYCHSQ 151
VVK R+ + + L EY + + F + P + + D + + ++L+ + Y H
Sbjct: 66 VVKFYGHRREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 152 GIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKE--YNVRVASRYFKGPELLVDLQ 208
GI HRD+KP N+++D E L++ D+GLA F + +E N + + PELL +
Sbjct: 124 GITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 209 DYDYSLDMWSLGCMFAGMIFRKEPF 233
+ +D+WS G + M+ + P+
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 93/197 (47%), Gaps = 13/197 (6%)
Query: 43 VRKVGRGKYSEVFEGINVNTNERCXXXX---XXXXXXXXXXXXXXXLQNLCGGPNVVKLL 99
+ K+G+G + EVF+GI+ T + + + C P V K
Sbjct: 12 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 71
Query: 100 -DIVRDQHSKTPSLIFEYVNS-TDFKVLYP-TLTDYDIRYYIYELLKALDYCHSQGIMHR 156
++D +I EY+ + +L P L + I + E+LK LDY HS+ +HR
Sbjct: 72 GSYLKDTKL---WIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHR 128
Query: 157 DVKPHNVMIDHELRKLRLIDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLD 215
D+K NV++ E +++L D+G+A + + N V + ++ PE ++ YD D
Sbjct: 129 DIKAANVLLS-EHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPE-VIKQSAYDSKAD 186
Query: 216 MWSLGCMFAGMIFRKEP 232
+WSLG + A + R EP
Sbjct: 187 IWSLG-ITAIELARGEP 202
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 12/205 (5%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXX---XXXXXXXXLQNLCGGPN 94
+D+++V+ +G G Y EV +N T E + + N
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 95 VVKLLDIVRDQHSKTPSLIFEYVNSTD-FKVLYP--TLTDYDIRYYIYELLKALDYCHSQ 151
VVK R+ + + L EY + + F + P + + D + + ++L+ + Y H
Sbjct: 66 VVKFYGHRREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 152 GIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKE--YNVRVASRYFKGPELLVDLQ 208
GI HRD+KP N+++D E L++ D+GLA F + +E N + + PELL +
Sbjct: 124 GITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 209 DYDYSLDMWSLGCMFAGMIFRKEPF 233
+ +D+WS G + M+ + P+
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 12/205 (5%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXX---XXXXXXXXLQNLCGGPN 94
+D+++V+ +G G Y EV +N T E + + N
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 95 VVKLLDIVRDQHSKTPSLIFEYVNSTD-FKVLYP--TLTDYDIRYYIYELLKALDYCHSQ 151
VVK R+ + + L EY + + F + P + + D + + ++L+ + Y H
Sbjct: 67 VVKFYGHRREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 152 GIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKE--YNVRVASRYFKGPELLVDLQ 208
GI HRD+KP N+++D E L++ D+GLA F + +E N + + PELL +
Sbjct: 125 GITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 209 DYDYSLDMWSLGCMFAGMIFRKEPF 233
+ +D+WS G + M+ + P+
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 12/205 (5%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXX---XXXXXXXXLQNLCGGPN 94
+D+++V+ +G G Y EV +N T E + + N
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 95 VVKLLDIVRDQHSKTPSLIFEYVNSTD-FKVLYP--TLTDYDIRYYIYELLKALDYCHSQ 151
VVK R+ + + L EY + + F + P + + D + + ++L+ + Y H
Sbjct: 66 VVKFYGHRREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 152 GIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKE--YNVRVASRYFKGPELLVDLQ 208
GI HRD+KP N+++D E L++ D+GLA F + +E N + + PELL +
Sbjct: 124 GITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 209 DYDYSLDMWSLGCMFAGMIFRKEPF 233
+ +D+WS G + M+ + P+
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 82/198 (41%), Gaps = 41/198 (20%)
Query: 136 YYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVAS 195
+Y E+ L+ H + I++RD+KP N+++D +R+ D GLA G+ RV +
Sbjct: 290 FYAAEICCGLEDLHRERIVYRDLKPENILLDDH-GHIRISDLGLAVHVPEGQTIKGRVGT 348
Query: 196 RYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDEL 255
+ PE++ + + Y +S D W+LGC+ MI + PF
Sbjct: 349 VGYMAPEVVKN-ERYTFSPDWWALGCLLYEMIAGQSPF---------------------- 385
Query: 256 NAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRL- 314
Q + R + K + + SP+A +LL D +RL
Sbjct: 386 ------------QQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLG 433
Query: 315 ----TAREAMAHPYFAQV 328
+ARE HP F ++
Sbjct: 434 CRGGSAREVKEHPLFKKL 451
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 108/245 (44%), Gaps = 50/245 (20%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTD-FKVLYPTL----TDYDIRYYIYELLKALDY 147
P V+ L ++ +++ LI EY + F + P L ++ D+ I ++L+ + Y
Sbjct: 89 PRVINLHEVY--ENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYY 146
Query: 148 CHSQGIMHRDVKPHNVMID--HELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLV 205
H I+H D+KP N+++ + L ++++D+G++ E + + + PE+L
Sbjct: 147 LHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEIL- 205
Query: 206 DLQDYD---YSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKY 262
+YD + DMW++G + A M+ F G DN + YLN
Sbjct: 206 ---NYDPITTATDMWNIG-IIAYMLLTHTSPFVGEDNQE---------------TYLNIS 246
Query: 263 HLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAH 322
+ +D +S + +S VS A DF+ LL + + R TA ++H
Sbjct: 247 QVNVD---------YSEETFSS---------VSQLATDFIQSLLVKNPEKRPTAEICLSH 288
Query: 323 PYFAQ 327
+ Q
Sbjct: 289 SWLQQ 293
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 87/201 (43%), Gaps = 33/201 (16%)
Query: 138 IYELLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYH--------PGK 187
+ ++ ALD+ H++GI HRD+KP N++ +H ++ +++ D+GL
Sbjct: 117 VQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTP 176
Query: 188 EYNVRVASRYFKGPELLVDLQD----YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQL 243
E S + PE++ + YD D+WSLG + ++ P F G D
Sbjct: 177 ELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILY-ILLSGYPPFVGRCGSD-- 233
Query: 244 VKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLD 303
G D A P ++ ++ +F + D H +S A D +
Sbjct: 234 ------CGWDRGEAC---------PACQNMLFESIQEGKYEFPDKDWAH-ISCAAKDLIS 277
Query: 304 KLLRYDHQDRLTAREAMAHPY 324
KLL D + RL+A + + HP+
Sbjct: 278 KLLVRDAKQRLSAAQVLQHPW 298
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 106/263 (40%), Gaps = 25/263 (9%)
Query: 37 QDDYEVVRKVGRGKYSEVFEGINVNTN----------ERCXXXXXXXXXXXXXXXXXXXL 86
+ Y+V +G G + V+ GI V+ N +R
Sbjct: 7 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 66
Query: 87 QNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNST----DFKVLYPTLTDYDIRYYIYELL 142
+ G V++LLD S LI E + DF L + R + +++L
Sbjct: 67 KVSSGFSGVIRLLDWFERPDSFV--LILERMEPVQDLFDFITERGALQEELARSFFWQVL 124
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 202
+A+ +CH+ G++HRD+K N++ID +L+LID+G Y +R + PE
Sbjct: 125 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPE 183
Query: 203 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNA---YL 259
+ + + S +WSLG + M+ PF HD+ + +V +++ +L
Sbjct: 184 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIRGQVFFRQRVSSECQHL 238
Query: 260 NKYHLELDPQLDALVGRHSRKPW 282
++ L L P PW
Sbjct: 239 IRWCLALRPSDRPTFEEIQNHPW 261
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 46/206 (22%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA-EFYHPGK 187
T+ R+Y E++ AL+Y HS+ +++RD+K N+M+D + +++ D+GL E G
Sbjct: 102 FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGA 160
Query: 188 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 247
+ + PE+L D DY ++D W LG + M+ + PF+ + +H++L ++
Sbjct: 161 TMKXFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFY--NQDHERLFEL- 216
Query: 248 KVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLR 307
++ R P + +SPEA L LL+
Sbjct: 217 -------------------------ILMEEIRFPRT----------LSPEAKSLLAGLLK 241
Query: 308 YDHQDRLT-----AREAMAHPYFAQV 328
D + RL A+E M H +F +
Sbjct: 242 KDPKQRLGGGPSDAKEVMEHRFFLSI 267
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 46/206 (22%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA-EFYHPGK 187
T+ R+Y E++ AL+Y HS+ +++RD+K N+M+D + +++ D+GL E G
Sbjct: 102 FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGA 160
Query: 188 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 247
+ + PE+L D DY ++D W LG + M+ + PF+ + +H++L ++
Sbjct: 161 TMKXFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFY--NQDHERLFEL- 216
Query: 248 KVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLR 307
++ R P + +SPEA L LL+
Sbjct: 217 -------------------------ILMEEIRFPRT----------LSPEAKSLLAGLLK 241
Query: 308 YDHQDRLT-----AREAMAHPYFAQV 328
D + RL A+E M H +F +
Sbjct: 242 KDPKQRLGGGPSDAKEVMEHRFFLSI 267
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 12/205 (5%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXX---XXXXXXXXLQNLCGGPN 94
+D+++V+ +G G Y EV +N T E + + N
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHEN 66
Query: 95 VVKLLDIVRDQHSKTPSLIFEYVNSTD-FKVLYP--TLTDYDIRYYIYELLKALDYCHSQ 151
VVK R+ + + L EY + + F + P + + D + + ++L+ + Y H
Sbjct: 67 VVKFYGHRREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 152 GIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKE--YNVRVASRYFKGPELLVDLQ 208
GI HRD+KP N+++D E L++ D+GLA F + +E N + + PELL +
Sbjct: 125 GITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 209 DYDYSLDMWSLGCMFAGMIFRKEPF 233
+ +D+WS G + M+ + P+
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 71/144 (49%), Gaps = 7/144 (4%)
Query: 94 NVVKLLDIVRDQHSKTPSLIFEYVNST----DFKVLYPTLTDYDIRYYIYELLKALDYCH 149
N++K+LDI +Q L+ E S F +P L + Y +L+ A+ Y
Sbjct: 90 NIIKVLDIFENQGFF--QLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLR 147
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
+ I+HRD+K N++I + ++LID+G A + GK + + + PE+L+
Sbjct: 148 LKDIIHRDIKDENIVIAEDF-TIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPY 206
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPF 233
L+MWSLG ++F + PF
Sbjct: 207 RGPELEMWSLGVTLYTLVFEENPF 230
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 46/206 (22%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA-EFYHPGK 187
T+ R+Y E++ AL+Y HS+ +++RD+K N+M+D + +++ D+GL E G
Sbjct: 107 FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGA 165
Query: 188 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 247
+ + PE+L D DY ++D W LG + M+ + PF+ + +H++L ++
Sbjct: 166 TMKXFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFY--NQDHERLFEL- 221
Query: 248 KVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLR 307
++ R P + +SPEA L LL+
Sbjct: 222 -------------------------ILMEEIRFPRT----------LSPEAKSLLAGLLK 246
Query: 308 YDHQDRLT-----AREAMAHPYFAQV 328
D + RL A+E M H +F +
Sbjct: 247 KDPKQRLGGGPSDAKEVMEHRFFLSI 272
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 46/206 (22%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA-EFYHPGK 187
T+ R+Y E++ AL+Y HS+ +++RD+K N+M+D + +++ D+GL E G
Sbjct: 102 FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGA 160
Query: 188 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 247
+ + PE+L D DY ++D W LG + M+ + PF+ + +H++L ++
Sbjct: 161 TMKXFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFY--NQDHERLFEL- 216
Query: 248 KVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLR 307
++ R P + +SPEA L LL+
Sbjct: 217 -------------------------ILMEEIRFPRT----------LSPEAKSLLAGLLK 241
Query: 308 YDHQDRLT-----AREAMAHPYFAQV 328
D + RL A+E M H +F +
Sbjct: 242 KDPKQRLGGGPSDAKEVMEHRFFLSI 267
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 89/201 (44%), Gaps = 13/201 (6%)
Query: 40 YEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGGPNVVKLL 99
++V+ K+G G Y V++ I+ T + + C P+VVK
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYY 90
Query: 100 DIVRDQHSKTPSL--IFEYVNSTD----FKVLYPTLTDYDIRYYIYELLKALDYCHSQGI 153
+ K L + EY + ++ TLT+ +I + LK L+Y H
Sbjct: 91 G----SYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK 146
Query: 154 MHRDVKPHNVMIDHELRKLRLIDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDLQDYDY 212
+HRD+K N++++ E +L D+G+A + + N + + ++ PE++ ++ Y+
Sbjct: 147 IHRDIKAGNILLNTE-GHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEI-GYNC 204
Query: 213 SLDMWSLGCMFAGMIFRKEPF 233
D+WSLG M K P+
Sbjct: 205 VADIWSLGITAIEMAEGKPPY 225
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 106/265 (40%), Gaps = 25/265 (9%)
Query: 37 QDDYEVVRKVGRGKYSEVFEGINVNTN----------ERCXXXXXXXXXXXXXXXXXXXL 86
+ Y+V +G G + V+ GI V+ N +R
Sbjct: 3 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 62
Query: 87 QNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNST----DFKVLYPTLTDYDIRYYIYELL 142
+ G V++LLD S LI E DF L + R + +++L
Sbjct: 63 KVSSGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFITERGALQEELARSFFWQVL 120
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 202
+A+ +CH+ G++HRD+K N++ID +L+LID+G Y +R + PE
Sbjct: 121 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPE 179
Query: 203 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNA---YL 259
+ + + S +WSLG + M+ PF HD+ + +V +++ +L
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIRGQVFFRQRVSSECQHL 234
Query: 260 NKYHLELDPQLDALVGRHSRKPWSK 284
++ L L P PW +
Sbjct: 235 IRWCLALRPSDRPTFEEIQNHPWMQ 259
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 106/265 (40%), Gaps = 25/265 (9%)
Query: 37 QDDYEVVRKVGRGKYSEVFEGINVNTN----------ERCXXXXXXXXXXXXXXXXXXXL 86
+ Y+V +G G + V+ GI V+ N +R
Sbjct: 3 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 62
Query: 87 QNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNST----DFKVLYPTLTDYDIRYYIYELL 142
+ G V++LLD S LI E DF L + R + +++L
Sbjct: 63 KVSSGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFITERGALQEELARSFFWQVL 120
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 202
+A+ +CH+ G++HRD+K N++ID +L+LID+G Y +R + PE
Sbjct: 121 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPE 179
Query: 203 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNA---YL 259
+ + + S +WSLG + M+ PF HD+ + +V +++ +L
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIGGQVFFRQRVSSECQHL 234
Query: 260 NKYHLELDPQLDALVGRHSRKPWSK 284
++ L L P PW +
Sbjct: 235 IRWCLALRPSDRPTFEEIQNHPWMQ 259
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 85/190 (44%), Gaps = 40/190 (21%)
Query: 141 LLKALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 199
++KAL++ HS+ ++HRDVKP NV+I+ L ++++ D+G++ + + + +
Sbjct: 162 IVKALEHLHSKLSVIHRDVKPSNVLINA-LGQVKMCDFGISGYLVDSVAKTIDAGCKPYM 220
Query: 200 GPELL---VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELN 256
PE + ++ + Y D+WSLG + + P+ QL ++ +
Sbjct: 221 APERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE-------- 272
Query: 257 AYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTA 316
E PQL P KF S E +DF + L+ + ++R T
Sbjct: 273 --------EPSPQL----------PADKF---------SAEFVDFTSQCLKKNSKERPTY 305
Query: 317 REAMAHPYFA 326
E M HP+F
Sbjct: 306 PELMQHPFFT 315
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 105/265 (39%), Gaps = 25/265 (9%)
Query: 37 QDDYEVVRKVGRGKYSEVFEGINVNTN----------ERCXXXXXXXXXXXXXXXXXXXL 86
+ Y+V +G G + V+ GI V+ N +R
Sbjct: 3 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 62
Query: 87 QNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNST----DFKVLYPTLTDYDIRYYIYELL 142
+ G V++LLD S LI E DF L + R + +++L
Sbjct: 63 KVSSGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFITERGALQEELARSFFWQVL 120
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 202
+A+ +CH+ G++HRD+K N++ID +L+LID+G Y +R + PE
Sbjct: 121 EAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPE 179
Query: 203 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNA---YL 259
+ + + S +WSLG + M+ PF HD+ + +V ++ +L
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIRGQVFFRQRVSXECQHL 234
Query: 260 NKYHLELDPQLDALVGRHSRKPWSK 284
++ L L P PW +
Sbjct: 235 IRWCLALRPSDRPTFEEIQNHPWMQ 259
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 105/263 (39%), Gaps = 25/263 (9%)
Query: 37 QDDYEVVRKVGRGKYSEVFEGINVNTN----------ERCXXXXXXXXXXXXXXXXXXXL 86
+ Y+V +G G + V+ GI V+ N +R
Sbjct: 22 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 81
Query: 87 QNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNST----DFKVLYPTLTDYDIRYYIYELL 142
+ G V++LLD S LI E DF L + R + +++L
Sbjct: 82 KVSSGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFITERGALQEELARSFFWQVL 139
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 202
+A+ +CH+ G++HRD+K N++ID +L+LID+G Y +R + PE
Sbjct: 140 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPE 198
Query: 203 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNA---YL 259
+ + + S +WSLG + M+ PF HD+ + +V +++ +L
Sbjct: 199 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIRGQVFFRQRVSSECQHL 253
Query: 260 NKYHLELDPQLDALVGRHSRKPW 282
++ L L P PW
Sbjct: 254 IRWCLALRPSDRPTFEEIQNHPW 276
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 105/263 (39%), Gaps = 25/263 (9%)
Query: 37 QDDYEVVRKVGRGKYSEVFEGINVNTN----------ERCXXXXXXXXXXXXXXXXXXXL 86
+ Y+V +G G + V+ GI V+ N +R
Sbjct: 8 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 67
Query: 87 QNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNST----DFKVLYPTLTDYDIRYYIYELL 142
+ G V++LLD S LI E DF L + R + +++L
Sbjct: 68 KVSSGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFITERGALQEELARSFFWQVL 125
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 202
+A+ +CH+ G++HRD+K N++ID +L+LID+G Y +R + PE
Sbjct: 126 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPE 184
Query: 203 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNA---YL 259
+ + + S +WSLG + M+ PF HD+ + +V +++ +L
Sbjct: 185 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIRGQVFFRQRVSSECQHL 239
Query: 260 NKYHLELDPQLDALVGRHSRKPW 282
++ L L P PW
Sbjct: 240 IRWCLALRPSDRPTFEEIQNHPW 262
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 105/263 (39%), Gaps = 25/263 (9%)
Query: 37 QDDYEVVRKVGRGKYSEVFEGINVNTN----------ERCXXXXXXXXXXXXXXXXXXXL 86
+ Y+V +G G + V+ GI V+ N +R
Sbjct: 7 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 66
Query: 87 QNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNST----DFKVLYPTLTDYDIRYYIYELL 142
+ G V++LLD S LI E DF L + R + +++L
Sbjct: 67 KVSSGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFITERGALQEELARSFFWQVL 124
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 202
+A+ +CH+ G++HRD+K N++ID +L+LID+G Y +R + PE
Sbjct: 125 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPE 183
Query: 203 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNA---YL 259
+ + + S +WSLG + M+ PF HD+ + +V +++ +L
Sbjct: 184 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIRGQVFFRQRVSSECQHL 238
Query: 260 NKYHLELDPQLDALVGRHSRKPW 282
++ L L P PW
Sbjct: 239 IRWCLALRPSDRPTFEEIQNHPW 261
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 120/293 (40%), Gaps = 48/293 (16%)
Query: 40 YEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNL--CGGPNVVK 97
Y K+G+G V+ ++V T + + + PN+V
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 98 LLD--IVRDQHSKTPSLIFEYVNSTDFK--VLYPTLTDYDIRYYIYELLKALDYCHSQGI 153
LD +V D+ ++ EY+ V + + I E L+AL++ HS +
Sbjct: 82 YLDSYLVGDELW----VVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQV 137
Query: 154 MHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK-EYNVRVASRYFKGPELLVDLQDYDY 212
+HRD+K N+++ + ++L D+G P + + + V + Y+ PE +V + Y
Sbjct: 138 IHRDIKSDNILLGMD-GSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPE-VVTRKAYGP 195
Query: 213 SLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDA 272
+D+WSLG M MI + P+ ++N + + + GT EL +P+ +
Sbjct: 196 KVDIWSLGIMAIEMIEGEPPYL--NENPLRALYLIATNGTPELQ----------NPEKLS 243
Query: 273 LVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 325
+ R DFL++ L D + R +A+E + H +
Sbjct: 244 AIFR-----------------------DFLNRCLEMDVEKRGSAKELLQHQFL 273
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 105/263 (39%), Gaps = 25/263 (9%)
Query: 37 QDDYEVVRKVGRGKYSEVFEGINVNTN----------ERCXXXXXXXXXXXXXXXXXXXL 86
+ Y+V +G G + V+ GI V+ N +R
Sbjct: 35 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 94
Query: 87 QNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNST----DFKVLYPTLTDYDIRYYIYELL 142
+ G V++LLD S LI E DF L + R + +++L
Sbjct: 95 KVSSGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFITERGALQEELARSFFWQVL 152
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 202
+A+ +CH+ G++HRD+K N++ID +L+LID+G Y +R + PE
Sbjct: 153 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPE 211
Query: 203 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNA---YL 259
+ + + S +WSLG + M+ PF HD+ + +V +++ +L
Sbjct: 212 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIGGQVFFRQRVSSECQHL 266
Query: 260 NKYHLELDPQLDALVGRHSRKPW 282
++ L L P PW
Sbjct: 267 IRWCLALRPSDRPTFEEIQNHPW 289
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 105/263 (39%), Gaps = 25/263 (9%)
Query: 37 QDDYEVVRKVGRGKYSEVFEGINVNTN----------ERCXXXXXXXXXXXXXXXXXXXL 86
+ Y+V +G G + V+ GI V+ N +R
Sbjct: 8 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 67
Query: 87 QNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNST----DFKVLYPTLTDYDIRYYIYELL 142
+ G V++LLD S LI E DF L + R + +++L
Sbjct: 68 KVSSGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFITERGALQEELARSFFWQVL 125
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 202
+A+ +CH+ G++HRD+K N++ID +L+LID+G Y +R + PE
Sbjct: 126 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPE 184
Query: 203 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNA---YL 259
+ + + S +WSLG + M+ PF HD+ + +V +++ +L
Sbjct: 185 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIRGQVFFRQRVSSECQHL 239
Query: 260 NKYHLELDPQLDALVGRHSRKPW 282
++ L L P PW
Sbjct: 240 IRWCLALRPSDRPTFEEIQNHPW 262
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 106/265 (40%), Gaps = 25/265 (9%)
Query: 37 QDDYEVVRKVGRGKYSEVFEGINVNTN----------ERCXXXXXXXXXXXXXXXXXXXL 86
+ Y+V +G G + V+ GI V+ N +R
Sbjct: 6 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 65
Query: 87 QNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNST----DFKVLYPTLTDYDIRYYIYELL 142
+ G V++LLD S LI E DF L + R + +++L
Sbjct: 66 KVSSGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFITERGALQEELARSFFWQVL 123
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 202
+A+ +CH+ G++HRD+K N++ID +L+LID+G Y +R + PE
Sbjct: 124 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPE 182
Query: 203 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNA---YL 259
+ + + S +WSLG + M+ PF HD+ + +V +++ +L
Sbjct: 183 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIRGQVFFRQRVSSECQHL 237
Query: 260 NKYHLELDPQLDALVGRHSRKPWSK 284
++ L L P PW +
Sbjct: 238 IRWCLALRPSDRPTFEEIQNHPWMQ 262
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 105/263 (39%), Gaps = 25/263 (9%)
Query: 37 QDDYEVVRKVGRGKYSEVFEGINVNTN----------ERCXXXXXXXXXXXXXXXXXXXL 86
+ Y+V +G G + V+ GI V+ N +R
Sbjct: 23 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 82
Query: 87 QNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNST----DFKVLYPTLTDYDIRYYIYELL 142
+ G V++LLD S LI E DF L + R + +++L
Sbjct: 83 KVSSGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFITERGALQEELARSFFWQVL 140
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 202
+A+ +CH+ G++HRD+K N++ID +L+LID+G Y +R + PE
Sbjct: 141 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPE 199
Query: 203 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNA---YL 259
+ + + S +WSLG + M+ PF HD+ + +V +++ +L
Sbjct: 200 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIRGQVFFRQRVSSECQHL 254
Query: 260 NKYHLELDPQLDALVGRHSRKPW 282
++ L L P PW
Sbjct: 255 IRWCLALRPSDRPTFEEIQNHPW 277
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 105/263 (39%), Gaps = 25/263 (9%)
Query: 37 QDDYEVVRKVGRGKYSEVFEGINVNTN----------ERCXXXXXXXXXXXXXXXXXXXL 86
+ Y+V +G G + V+ GI V+ N +R
Sbjct: 36 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 95
Query: 87 QNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNST----DFKVLYPTLTDYDIRYYIYELL 142
+ G V++LLD S LI E DF L + R + +++L
Sbjct: 96 KVSSGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFITERGALQEELARSFFWQVL 153
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 202
+A+ +CH+ G++HRD+K N++ID +L+LID+G Y +R + PE
Sbjct: 154 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPE 212
Query: 203 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNA---YL 259
+ + + S +WSLG + M+ PF HD+ + +V +++ +L
Sbjct: 213 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIGGQVFFRQRVSSECQHL 267
Query: 260 NKYHLELDPQLDALVGRHSRKPW 282
++ L L P PW
Sbjct: 268 IRWCLALRPSDRPTFEEIQNHPW 290
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 105/263 (39%), Gaps = 25/263 (9%)
Query: 37 QDDYEVVRKVGRGKYSEVFEGINVNTN----------ERCXXXXXXXXXXXXXXXXXXXL 86
+ Y+V +G G + V+ GI V+ N +R
Sbjct: 8 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 67
Query: 87 QNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNST----DFKVLYPTLTDYDIRYYIYELL 142
+ G V++LLD S LI E DF L + R + +++L
Sbjct: 68 KVSSGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFITERGALQEELARSFFWQVL 125
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 202
+A+ +CH+ G++HRD+K N++ID +L+LID+G Y +R + PE
Sbjct: 126 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPE 184
Query: 203 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNA---YL 259
+ + + S +WSLG + M+ PF HD+ + +V +++ +L
Sbjct: 185 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIRGQVFFRQRVSSECQHL 239
Query: 260 NKYHLELDPQLDALVGRHSRKPW 282
++ L L P PW
Sbjct: 240 IRWCLALRPSDRPTFEEIQNHPW 262
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 105/263 (39%), Gaps = 25/263 (9%)
Query: 37 QDDYEVVRKVGRGKYSEVFEGINVNTN----------ERCXXXXXXXXXXXXXXXXXXXL 86
+ Y+V +G G + V+ GI V+ N +R
Sbjct: 35 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 94
Query: 87 QNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNST----DFKVLYPTLTDYDIRYYIYELL 142
+ G V++LLD S LI E DF L + R + +++L
Sbjct: 95 KVSSGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFITERGALQEELARSFFWQVL 152
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 202
+A+ +CH+ G++HRD+K N++ID +L+LID+G Y +R + PE
Sbjct: 153 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPE 211
Query: 203 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNA---YL 259
+ + + S +WSLG + M+ PF HD+ + +V +++ +L
Sbjct: 212 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIRGQVFFRQRVSSECQHL 266
Query: 260 NKYHLELDPQLDALVGRHSRKPW 282
++ L L P PW
Sbjct: 267 IRWCLALRPSDRPTFEEIQNHPW 289
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 105/263 (39%), Gaps = 25/263 (9%)
Query: 37 QDDYEVVRKVGRGKYSEVFEGINVNTN----------ERCXXXXXXXXXXXXXXXXXXXL 86
+ Y+V +G G + V+ GI V+ N +R
Sbjct: 42 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 101
Query: 87 QNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNST----DFKVLYPTLTDYDIRYYIYELL 142
+ G V++LLD S LI E DF L + R + +++L
Sbjct: 102 KVSSGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFITERGALQEELARSFFWQVL 159
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 202
+A+ +CH+ G++HRD+K N++ID +L+LID+G Y +R + PE
Sbjct: 160 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPE 218
Query: 203 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNA---YL 259
+ + + S +WSLG + M+ PF HD+ + +V +++ +L
Sbjct: 219 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIRGQVFFRQRVSSECQHL 273
Query: 260 NKYHLELDPQLDALVGRHSRKPW 282
++ L L P PW
Sbjct: 274 IRWCLALRPSDRPTFEEIQNHPW 296
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 105/263 (39%), Gaps = 25/263 (9%)
Query: 37 QDDYEVVRKVGRGKYSEVFEGINVNTN----------ERCXXXXXXXXXXXXXXXXXXXL 86
+ Y+V +G G + V+ GI V+ N +R
Sbjct: 50 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 109
Query: 87 QNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNST----DFKVLYPTLTDYDIRYYIYELL 142
+ G V++LLD S LI E DF L + R + +++L
Sbjct: 110 KVSSGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFITERGALQEELARSFFWQVL 167
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 202
+A+ +CH+ G++HRD+K N++ID +L+LID+G Y +R + PE
Sbjct: 168 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPE 226
Query: 203 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNA---YL 259
+ + + S +WSLG + M+ PF HD+ + +V +++ +L
Sbjct: 227 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIRGQVFFRQRVSSECQHL 281
Query: 260 NKYHLELDPQLDALVGRHSRKPW 282
++ L L P PW
Sbjct: 282 IRWCLALRPSDRPTFEEIQNHPW 304
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 105/263 (39%), Gaps = 25/263 (9%)
Query: 37 QDDYEVVRKVGRGKYSEVFEGINVNTN----------ERCXXXXXXXXXXXXXXXXXXXL 86
+ Y+V +G G + V+ GI V+ N +R
Sbjct: 36 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 95
Query: 87 QNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNST----DFKVLYPTLTDYDIRYYIYELL 142
+ G V++LLD S LI E DF L + R + +++L
Sbjct: 96 KVSSGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFITERGALQEELARSFFWQVL 153
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 202
+A+ +CH+ G++HRD+K N++ID +L+LID+G Y +R + PE
Sbjct: 154 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPE 212
Query: 203 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNA---YL 259
+ + + S +WSLG + M+ PF HD+ + +V +++ +L
Sbjct: 213 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIGGQVFFRQRVSSECQHL 267
Query: 260 NKYHLELDPQLDALVGRHSRKPW 282
++ L L P PW
Sbjct: 268 IRWCLALRPSDRPTFEEIQNHPW 290
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 105/263 (39%), Gaps = 25/263 (9%)
Query: 37 QDDYEVVRKVGRGKYSEVFEGINVNTN----------ERCXXXXXXXXXXXXXXXXXXXL 86
+ Y+V +G G + V+ GI V+ N +R
Sbjct: 35 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 94
Query: 87 QNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNST----DFKVLYPTLTDYDIRYYIYELL 142
+ G V++LLD S LI E DF L + R + +++L
Sbjct: 95 KVSSGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFITERGALQEELARSFFWQVL 152
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 202
+A+ +CH+ G++HRD+K N++ID +L+LID+G Y +R + PE
Sbjct: 153 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPE 211
Query: 203 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNA---YL 259
+ + + S +WSLG + M+ PF HD+ + +V +++ +L
Sbjct: 212 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIGGQVFFRQRVSSECQHL 266
Query: 260 NKYHLELDPQLDALVGRHSRKPW 282
++ L L P PW
Sbjct: 267 IRWCLALRPSDRPTFEEIQNHPW 289
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 90/214 (42%), Gaps = 25/214 (11%)
Query: 38 DDYEVVRKVGRGKYSEV-----FEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
+DYEVV+ +GRG + EV V + +
Sbjct: 74 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS 133
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDI-----RYYIYELLKALDY 147
P VV+L +D + ++ EY+ D L +++YD+ R+Y E++ ALD
Sbjct: 134 PWVVQLFYAFQDD--RYLYMVMEYMPGGD---LVNLMSNYDVPEKWARFYTAEVVLALDA 188
Query: 148 CHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR----VASRYFKGPEL 203
HS G +HRDVKP N+++D L+L D+G KE VR V + + PE+
Sbjct: 189 IHSMGFIHRDVKPDNMLLDKS-GHLKLADFGTC--MKMNKEGMVRCDTAVGTPDYISPEV 245
Query: 204 LVDLQD---YDYSLDMWSLGCMFAGMIFRKEPFF 234
L Y D WS+G M+ PF+
Sbjct: 246 LKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY 279
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 105/238 (44%), Gaps = 46/238 (19%)
Query: 93 PNVVKLLD--IVRDQHSKTPSLIFEYVNSTDFK--VLYPTLTDYDIRYYIYELLKALDYC 148
PN+V LD +V D+ ++ EY+ V + + I E L+AL++
Sbjct: 78 PNIVNYLDSYLVGDELW----VVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFL 133
Query: 149 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK-EYNVRVASRYFKGPELLVDL 207
HS ++HRD+K N+++ + ++L D+G P + + + V + Y+ PE +V
Sbjct: 134 HSNQVIHRDIKSDNILLGMD-GSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPE-VVTR 191
Query: 208 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELD 267
+ Y +D+WSLG M MI + P+ ++N + + + GT EL +
Sbjct: 192 KAYGPKVDIWSLGIMAIEMIEGEPPYL--NENPLRALYLIATNGTPELQ----------N 239
Query: 268 PQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 325
P+ + + R DFL++ L D + R +A+E + H +
Sbjct: 240 PEKLSAIFR-----------------------DFLNRCLEMDVEKRGSAKELIQHQFL 274
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 86/190 (45%), Gaps = 40/190 (21%)
Query: 141 LLKALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 199
++KAL++ HS+ ++HRDVKP NV+I + L ++++ D+G++ + ++ + +
Sbjct: 118 IVKALEHLHSKLSVIHRDVKPSNVLI-NALGQVKMCDFGISGYLVDDVAKDIDAGCKPYM 176
Query: 200 GPELL---VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELN 256
PE + ++ + Y D+WSLG + + P+ QL ++ +
Sbjct: 177 APERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE-------- 228
Query: 257 AYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTA 316
E PQL P KF S E +DF + L+ + ++R T
Sbjct: 229 --------EPSPQL----------PADKF---------SAEFVDFTSQCLKKNSKERPTY 261
Query: 317 REAMAHPYFA 326
E M HP+F
Sbjct: 262 PELMQHPFFT 271
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 90/214 (42%), Gaps = 25/214 (11%)
Query: 38 DDYEVVRKVGRGKYSEV-----FEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
+DYEVV+ +GRG + EV V + +
Sbjct: 74 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS 133
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDI-----RYYIYELLKALDY 147
P VV+L +D + ++ EY+ D L +++YD+ R+Y E++ ALD
Sbjct: 134 PWVVQLFYAFQDD--RYLYMVMEYMPGGD---LVNLMSNYDVPEKWARFYTAEVVLALDA 188
Query: 148 CHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR----VASRYFKGPEL 203
HS G +HRDVKP N+++D L+L D+G KE VR V + + PE+
Sbjct: 189 IHSMGFIHRDVKPDNMLLDKS-GHLKLADFGTC--MKMNKEGMVRCDTAVGTPDYISPEV 245
Query: 204 LVDLQD---YDYSLDMWSLGCMFAGMIFRKEPFF 234
L Y D WS+G M+ PF+
Sbjct: 246 LKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY 279
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 128 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA-EFYHPG 186
LT+ + RYY+ +++ Y H ++HRD+K N+ ++ +L ++++ D+GLA + + G
Sbjct: 135 ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDL-EVKIGDFGLATKVEYDG 193
Query: 187 KEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 233
+ V + + PE+L + + + +D+WS+GC+ ++ K PF
Sbjct: 194 ERKKVLCGTPNYIAPEVLSK-KGHSFEVDVWSIGCIMYTLLVGKPPF 239
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 128 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA-EFYHPG 186
LT+ + RYY+ +++ Y H ++HRD+K N+ ++ +L ++++ D+GLA + + G
Sbjct: 137 ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDL-EVKIGDFGLATKVEYDG 195
Query: 187 KEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 233
+ V + + PE+L + + + +D+WS+GC+ ++ K PF
Sbjct: 196 ERKKVLCGTPNYIAPEVLSK-KGHSFEVDVWSIGCIMYTLLVGKPPF 241
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 120/293 (40%), Gaps = 48/293 (16%)
Query: 40 YEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNL--CGGPNVVK 97
Y K+G+G V+ ++V T + + + PN+V
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 98 LLD--IVRDQHSKTPSLIFEYVNSTDFK--VLYPTLTDYDIRYYIYELLKALDYCHSQGI 153
LD +V D+ ++ EY+ V + + I E L+AL++ HS +
Sbjct: 82 YLDSYLVGDELW----VVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQV 137
Query: 154 MHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK-EYNVRVASRYFKGPELLVDLQDYDY 212
+HRD+K N+++ + ++L D+G P + + + V + Y+ PE +V + Y
Sbjct: 138 IHRDIKSDNILLGMD-GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPE-VVTRKAYGP 195
Query: 213 SLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDA 272
+D+WSLG M MI + P+ ++N + + + GT EL +P+ +
Sbjct: 196 KVDIWSLGIMAIEMIEGEPPYL--NENPLRALYLIATNGTPELQ----------NPEKLS 243
Query: 273 LVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 325
+ R DFL++ L D + R +A+E + H +
Sbjct: 244 AIFR-----------------------DFLNRCLDMDVEKRGSAKELLQHQFL 273
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 128 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA-EFYHPG 186
LT+ + RYY+ +++ Y H ++HRD+K N+ ++ +L ++++ D+GLA + + G
Sbjct: 111 ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDL-EVKIGDFGLATKVEYDG 169
Query: 187 KEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 233
+ V + + PE+L + + + +D+WS+GC+ ++ K PF
Sbjct: 170 ERKKVLCGTPNYIAPEVLSK-KGHSFEVDVWSIGCIMYTLLVGKPPF 215
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 90/214 (42%), Gaps = 25/214 (11%)
Query: 38 DDYEVVRKVGRGKYSEV-----FEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
+DYEVV+ +GRG + EV V + +
Sbjct: 69 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS 128
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDI-----RYYIYELLKALDY 147
P VV+L +D + ++ EY+ D L +++YD+ R+Y E++ ALD
Sbjct: 129 PWVVQLFYAFQDD--RYLYMVMEYMPGGD---LVNLMSNYDVPEKWARFYTAEVVLALDA 183
Query: 148 CHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR----VASRYFKGPEL 203
HS G +HRDVKP N+++D L+L D+G KE VR V + + PE+
Sbjct: 184 IHSMGFIHRDVKPDNMLLDKS-GHLKLADFGTC--MKMNKEGMVRCDTAVGTPDYISPEV 240
Query: 204 LVDLQD---YDYSLDMWSLGCMFAGMIFRKEPFF 234
L Y D WS+G M+ PF+
Sbjct: 241 LKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY 274
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 104/263 (39%), Gaps = 25/263 (9%)
Query: 37 QDDYEVVRKVGRGKYSEVFEGINVNTN----------ERCXXXXXXXXXXXXXXXXXXXL 86
+ Y+V +G G + V+ GI V+ N +R
Sbjct: 22 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 81
Query: 87 QNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNST----DFKVLYPTLTDYDIRYYIYELL 142
+ G V++LLD S LI E DF L + R + +++L
Sbjct: 82 KVSSGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFITERGALQEELARSFFWQVL 139
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 202
+A+ +CH+ G++HRD+K N++ID +L+LID+G Y +R + PE
Sbjct: 140 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPE 198
Query: 203 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNA---YL 259
+ + + S +WSLG + M+ PF HD+ + +V ++ +L
Sbjct: 199 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIRGQVFFRQRVSXECQHL 253
Query: 260 NKYHLELDPQLDALVGRHSRKPW 282
++ L L P PW
Sbjct: 254 IRWCLALRPSDRPTFEEIQNHPW 276
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 104/263 (39%), Gaps = 25/263 (9%)
Query: 37 QDDYEVVRKVGRGKYSEVFEGINVNTN----------ERCXXXXXXXXXXXXXXXXXXXL 86
+ Y+V +G G + V+ GI V+ N +R
Sbjct: 36 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 95
Query: 87 QNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNST----DFKVLYPTLTDYDIRYYIYELL 142
+ G V++LLD S LI E DF L + R + +++L
Sbjct: 96 KVSSGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFITERGALQEELARSFFWQVL 153
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 202
+A+ +CH+ G++HRD+K N++ID +L+LID+G Y +R + PE
Sbjct: 154 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPE 212
Query: 203 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNA---YL 259
+ + + S +WSLG + M+ PF HD+ + +V ++ +L
Sbjct: 213 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIGGQVFFRQRVSXECQHL 267
Query: 260 NKYHLELDPQLDALVGRHSRKPW 282
++ L L P PW
Sbjct: 268 IRWCLALRPSDRPTFEEIQNHPW 290
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 104/263 (39%), Gaps = 25/263 (9%)
Query: 37 QDDYEVVRKVGRGKYSEVFEGINVNTN----------ERCXXXXXXXXXXXXXXXXXXXL 86
+ Y+V +G G + V+ GI V+ N +R
Sbjct: 23 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 82
Query: 87 QNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNST----DFKVLYPTLTDYDIRYYIYELL 142
+ G V++LLD S LI E DF L + R + +++L
Sbjct: 83 KVSSGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFITERGALQEELARSFFWQVL 140
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 202
+A+ +CH+ G++HRD+K N++ID +L+LID+G Y +R + PE
Sbjct: 141 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPE 199
Query: 203 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNA---YL 259
+ + + S +WSLG + M+ PF HD+ + +V ++ +L
Sbjct: 200 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIRGQVFFRQRVSXECQHL 254
Query: 260 NKYHLELDPQLDALVGRHSRKPW 282
++ L L P PW
Sbjct: 255 IRWCLALRPSDRPTFEEIQNHPW 277
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 116/296 (39%), Gaps = 47/296 (15%)
Query: 37 QDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGGPNVV 96
D +EV ++GRG S V+ T + + PN++
Sbjct: 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNII 111
Query: 97 KLLDIVRDQHSKTP---SLIFEYVNST---DFKVLYPTLTDYDIRYYIYELLKALDYCHS 150
KL +I +TP SL+ E V D V ++ D + ++L+A+ Y H
Sbjct: 112 KLKEIF-----ETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHE 166
Query: 151 QGIMHRDVKPHNVMIDHEL--RKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 208
GI+HRD+KP N++ L++ D+GL++ + + PE+L
Sbjct: 167 NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCA 226
Query: 209 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDP 268
Y +DMWS+G + ++ EPF+ + DQ + LN + + P
Sbjct: 227 -YGPEVDMWSVGIITYILLCGFEPFY--DERGDQFM----------FRRILNCEYYFISP 273
Query: 269 QLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPY 324
D VS A D + KL+ D + RLT +A+ HP+
Sbjct: 274 WWDE---------------------VSLNAKDLVRKLIVLDPKKRLTTFQALQHPW 308
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 104/263 (39%), Gaps = 25/263 (9%)
Query: 37 QDDYEVVRKVGRGKYSEVFEGINVNTN----------ERCXXXXXXXXXXXXXXXXXXXL 86
+ Y+V +G G + V+ GI V+ N +R
Sbjct: 50 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 109
Query: 87 QNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNST----DFKVLYPTLTDYDIRYYIYELL 142
+ G V++LLD S LI E DF L + R + +++L
Sbjct: 110 KVSSGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFITERGALQEELARSFFWQVL 167
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 202
+A+ +CH+ G++HRD+K N++ID +L+LID+G Y +R + PE
Sbjct: 168 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPE 226
Query: 203 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNA---YL 259
+ + + S +WSLG + M+ PF HD+ + +V ++ +L
Sbjct: 227 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIRGQVFFRQRVSXECQHL 281
Query: 260 NKYHLELDPQLDALVGRHSRKPW 282
++ L L P PW
Sbjct: 282 IRWCLALRPSDRPTFEEIQNHPW 304
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 104/263 (39%), Gaps = 25/263 (9%)
Query: 37 QDDYEVVRKVGRGKYSEVFEGINVNTN----------ERCXXXXXXXXXXXXXXXXXXXL 86
+ Y+V +G G + V+ GI V+ N +R
Sbjct: 36 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 95
Query: 87 QNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNST----DFKVLYPTLTDYDIRYYIYELL 142
+ G V++LLD S LI E DF L + R + +++L
Sbjct: 96 KVSSGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFITERGALQEELARSFFWQVL 153
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 202
+A+ +CH+ G++HRD+K N++ID +L+LID+G Y +R + PE
Sbjct: 154 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPE 212
Query: 203 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNA---YL 259
+ + + S +WSLG + M+ PF HD+ + +V ++ +L
Sbjct: 213 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIGGQVFFRQRVSXECQHL 267
Query: 260 NKYHLELDPQLDALVGRHSRKPW 282
++ L L P PW
Sbjct: 268 IRWCLALRPSDRPTFEEIQNHPW 290
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 104/263 (39%), Gaps = 25/263 (9%)
Query: 37 QDDYEVVRKVGRGKYSEVFEGINVNTN----------ERCXXXXXXXXXXXXXXXXXXXL 86
+ Y+V +G G + V+ GI V+ N +R
Sbjct: 23 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 82
Query: 87 QNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNST----DFKVLYPTLTDYDIRYYIYELL 142
+ G V++LLD S LI E DF L + R + +++L
Sbjct: 83 KVSSGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFITERGALQEELARSFFWQVL 140
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 202
+A+ +CH+ G++HRD+K N++ID +L+LID+G Y +R + PE
Sbjct: 141 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPE 199
Query: 203 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNA---YL 259
+ + + S +WSLG + M+ PF HD+ + +V ++ +L
Sbjct: 200 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIRGQVFFRQRVSXECQHL 254
Query: 260 NKYHLELDPQLDALVGRHSRKPW 282
++ L L P PW
Sbjct: 255 IRWCLALRPXDRPTFEEIQNHPW 277
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 104/263 (39%), Gaps = 25/263 (9%)
Query: 37 QDDYEVVRKVGRGKYSEVFEGINVNTN----------ERCXXXXXXXXXXXXXXXXXXXL 86
+ Y+V +G G + V+ GI V+ N +R
Sbjct: 35 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 94
Query: 87 QNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNST----DFKVLYPTLTDYDIRYYIYELL 142
+ G V++LLD S LI E DF L + R + +++L
Sbjct: 95 KVSSGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFITERGALQEELARSFFWQVL 152
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 202
+A+ +CH+ G++HRD+K N++ID +L+LID+G Y +R + PE
Sbjct: 153 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPE 211
Query: 203 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNA---YL 259
+ + + S +WSLG + M+ PF HD+ + +V ++ +L
Sbjct: 212 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIGGQVFFRQRVSXECQHL 266
Query: 260 NKYHLELDPQLDALVGRHSRKPW 282
++ L L P PW
Sbjct: 267 IRWCLALRPSDRPTFEEIQNHPW 289
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 87/185 (47%), Gaps = 14/185 (7%)
Query: 45 KVGRGKYSEVFEGINVNTNERCXXXX---XXXXXXXXXXXXXXXLQNLCGGPNVVKLLDI 101
++G+G + EV++GI+ +T E + + C P + +
Sbjct: 26 RIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFG- 84
Query: 102 VRDQHSKTPSL--IFEYVNS-TDFKVLYP-TLTDYDIRYYIYELLKALDYCHSQGIMHRD 157
+ K+ L I EY+ + +L P L + I + E+LK LDY HS+ +HRD
Sbjct: 85 ---SYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHRD 141
Query: 158 VKPHNVMIDHELRKLRLIDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDM 216
+K NV++ E ++L D+G+A + + N V + ++ PE ++ YD+ D+
Sbjct: 142 IKAANVLLS-EQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPE-VIKQSAYDFKADI 199
Query: 217 WSLGC 221
WSLG
Sbjct: 200 WSLGI 204
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 105/265 (39%), Gaps = 25/265 (9%)
Query: 37 QDDYEVVRKVGRGKYSEVFEGINVNTN----------ERCXXXXXXXXXXXXXXXXXXXL 86
+ Y+V +G G + V+ GI V+ N +R
Sbjct: 30 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 89
Query: 87 QNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNST----DFKVLYPTLTDYDIRYYIYELL 142
+ G V++LLD S LI E DF L + R + +++L
Sbjct: 90 KVSSGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFITERGALQEELARSFFWQVL 147
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 202
+A+ +CH+ G++HRD+K N++ID +L+LID+G Y +R + PE
Sbjct: 148 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPE 206
Query: 203 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNA---YL 259
+ + + S +WSLG + M+ PF HD+ + +V ++ +L
Sbjct: 207 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIRGQVFFRQRVSXECQHL 261
Query: 260 NKYHLELDPQLDALVGRHSRKPWSK 284
++ L L P PW +
Sbjct: 262 IRWCLALRPSDRPTFEEIQNHPWMQ 286
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 102/221 (46%), Gaps = 11/221 (4%)
Query: 37 QDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNL--CGGPN 94
+D +E++ ++G G + +V++ N T+ + L C PN
Sbjct: 36 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPN 95
Query: 95 VVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLY--PTLTDYDIRYYIYELLKALDYCHSQG 152
+VKLLD +++ + F + D +L LT+ I+ + L AL+Y H
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK 155
Query: 153 IMHRDVKPHNVMIDHELRKLRLIDWGL-AEFYHPGKEYNVRVASRYFKGPELLV----DL 207
I+HRD+K N++ + ++L D+G+ A+ + + + + Y+ PE+++
Sbjct: 156 IIHRDLKAGNILFTLD-GDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKD 214
Query: 208 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
+ YDY D+WSLG M EP + + L+KIAK
Sbjct: 215 RPYDYKADVWSLGITLIEMA-EIEPPHHELNPMRVLLKIAK 254
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 72/134 (53%), Gaps = 7/134 (5%)
Query: 112 LIFEYVNSTDFKVLYPTLTDYDIR---YYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 168
+ EY+N D + +D+ +Y E++ L + HS+GI++RD+K N+++D +
Sbjct: 95 FVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKD 154
Query: 169 LRKLRLIDWGLAEFYHPG-KEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMI 227
+++ D+G+ + G + N + + PE+L+ Q Y++S+D WS G + M+
Sbjct: 155 -GHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLG-QKYNHSVDWWSFGVLLYEML 212
Query: 228 FRKEPFFYGHDNHD 241
+ P F+G D +
Sbjct: 213 IGQSP-FHGQDEEE 225
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 104/263 (39%), Gaps = 25/263 (9%)
Query: 37 QDDYEVVRKVGRGKYSEVFEGINVNTN----------ERCXXXXXXXXXXXXXXXXXXXL 86
+ Y+V +G G + V+ GI V+ N +R
Sbjct: 55 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 114
Query: 87 QNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNST----DFKVLYPTLTDYDIRYYIYELL 142
+ G V++LLD S LI E DF L + R + +++L
Sbjct: 115 KVSSGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFITERGALQEELARSFFWQVL 172
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 202
+A+ +CH+ G++HRD+K N++ID +L+LID+G Y +R + PE
Sbjct: 173 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPE 231
Query: 203 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNA---YL 259
+ + + S +WSLG + M+ PF HD+ + +V ++ +L
Sbjct: 232 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIRGQVFFRQRVSXECQHL 286
Query: 260 NKYHLELDPQLDALVGRHSRKPW 282
++ L L P PW
Sbjct: 287 IRWCLALRPSDRPTFEEIQNHPW 309
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 102/221 (46%), Gaps = 11/221 (4%)
Query: 37 QDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNL--CGGPN 94
+D +E++ ++G G + +V++ N T+ + L C PN
Sbjct: 36 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPN 95
Query: 95 VVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLY--PTLTDYDIRYYIYELLKALDYCHSQG 152
+VKLLD +++ + F + D +L LT+ I+ + L AL+Y H
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK 155
Query: 153 IMHRDVKPHNVMIDHELRKLRLIDWGL-AEFYHPGKEYNVRVASRYFKGPELLV----DL 207
I+HRD+K N++ + ++L D+G+ A+ + + + + Y+ PE+++
Sbjct: 156 IIHRDLKAGNILFTLD-GDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKD 214
Query: 208 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
+ YDY D+WSLG M EP + + L+KIAK
Sbjct: 215 RPYDYKADVWSLGITLIEMA-EIEPPHHELNPMRVLLKIAK 254
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 86/199 (43%), Gaps = 37/199 (18%)
Query: 130 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVM--IDHELRKLRLIDWGLAEFYHPGK 187
T+ D I ++L A+ Y H GI+HRD+KP N++ E K+ + D+GL++ G
Sbjct: 118 TEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD 177
Query: 188 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 247
+ + + PE+L + Y ++D WS+G + ++ PF+
Sbjct: 178 VMSTACGTPGYVAPEVLAQ-KPYSKAVDCWSIGVIAYILLCGYPPFY------------- 223
Query: 248 KVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLR 307
DE ++ L + L+ + + D+ W +S A DF+ L+
Sbjct: 224 -----DENDSKLFEQILKAEYEFDSPY-------WDD---------ISDSAKDFIRNLME 262
Query: 308 YDHQDRLTAREAMAHPYFA 326
D R T +A HP+ A
Sbjct: 263 KDPNKRYTCEQAARHPWIA 281
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 105/238 (44%), Gaps = 46/238 (19%)
Query: 93 PNVVKLLD--IVRDQHSKTPSLIFEYVNSTDFK--VLYPTLTDYDIRYYIYELLKALDYC 148
PN+V LD +V D+ ++ EY+ V + + I E L+AL++
Sbjct: 78 PNIVNYLDSYLVGDELW----VVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFL 133
Query: 149 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK-EYNVRVASRYFKGPELLVDL 207
HS ++HR++K N+++ + ++L D+G P + + + V + Y+ PE +V
Sbjct: 134 HSNQVIHRNIKSDNILLGMD-GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPE-VVTR 191
Query: 208 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELD 267
+ Y +D+WSLG M MI + P+ ++N + + + GT EL +
Sbjct: 192 KAYGPKVDIWSLGIMAIEMIEGEPPYL--NENPLRALYLIATNGTPELQ----------N 239
Query: 268 PQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 325
P+ + + R DFL++ L D + R +A+E + H +
Sbjct: 240 PEKLSAIFR-----------------------DFLNRCLEMDVEKRGSAKELIQHQFL 274
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 17/155 (10%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLT--------DYDIRYYIYELLKA 144
PN+V+ D + D+ + T ++ EY D + T ++ +R + +L A
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRV-MTQLTLA 123
Query: 145 LDYCHSQG-----IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR-VASRYF 198
L CH + ++HRD+KP NV +D + + ++L D+GLA + +++ V + Y+
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGK-QNVKLGDFGLARILNHDEDFAKEFVGTPYY 182
Query: 199 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 233
PE + + Y+ D+WSLGC+ + PF
Sbjct: 183 MSPEQM-NRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 102/221 (46%), Gaps = 11/221 (4%)
Query: 37 QDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNL--CGGPN 94
+D +E++ ++G G + +V++ N T+ + L C PN
Sbjct: 36 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPN 95
Query: 95 VVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLY--PTLTDYDIRYYIYELLKALDYCHSQG 152
+VKLLD +++ + F + D +L LT+ I+ + L AL+Y H
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK 155
Query: 153 IMHRDVKPHNVMIDHELRKLRLIDWGL-AEFYHPGKEYNVRVASRYFKGPELLV----DL 207
I+HRD+K N++ + ++L D+G+ A+ + + + + Y+ PE+++
Sbjct: 156 IIHRDLKAGNILFTLD-GDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKD 214
Query: 208 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
+ YDY D+WSLG M EP + + L+KIAK
Sbjct: 215 RPYDYKADVWSLGITLIEMA-EIEPPHHELNPMRVLLKIAK 254
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 118/293 (40%), Gaps = 48/293 (16%)
Query: 40 YEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNL--CGGPNVVK 97
Y K+G+G V+ ++V T + + + PN+V
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 98 LLD--IVRDQHSKTPSLIFEYVNSTDFK--VLYPTLTDYDIRYYIYELLKALDYCHSQGI 153
LD +V D+ ++ EY+ V + + I E L+AL++ HS +
Sbjct: 82 YLDSYLVGDELW----VVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQV 137
Query: 154 MHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR-VASRYFKGPELLVDLQDYDY 212
+HRD+K N+++ + ++L D+G P + V + Y+ PE +V + Y
Sbjct: 138 IHRDIKSDNILLGMD-GSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPE-VVTRKAYGP 195
Query: 213 SLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDA 272
+D+WSLG M MI + P+ ++N + + + GT EL +P+ +
Sbjct: 196 KVDIWSLGIMAIEMIEGEPPYL--NENPLRALYLIATNGTPELQ----------NPEKLS 243
Query: 273 LVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 325
+ R DFL++ L D + R +A+E + H +
Sbjct: 244 AIFR-----------------------DFLNRCLDMDVEKRGSAKELLQHQFL 273
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 90/201 (44%), Gaps = 47/201 (23%)
Query: 135 RYYIYELLKALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLA-EFYHPGKEYNVR 192
R+Y E++ ALDY HS+ +++RD+K N+M+D + +++ D+GL E G
Sbjct: 251 RFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKTF 309
Query: 193 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 252
+ + PE+L D DY ++D W LG + M+ + PF+ + +H++L ++
Sbjct: 310 CGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFY--NQDHEKLFEL------ 360
Query: 253 DELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQD 312
++ R P + PEA L LL+ D +
Sbjct: 361 --------------------ILMEEIRFP----------RTLGPEAKSLLSGLLKKDPKQ 390
Query: 313 RLT-----AREAMAHPYFAQV 328
RL A+E M H +FA +
Sbjct: 391 RLGGGSEDAKEIMQHRFFAGI 411
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 12/205 (5%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXX---XXXXXXXXLQNLCGGPN 94
+D+++V+ +G G EV +N T E + + N
Sbjct: 6 EDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 95 VVKLLDIVRDQHSKTPSLIFEYVNSTD-FKVLYP--TLTDYDIRYYIYELLKALDYCHSQ 151
VVK R+ + + L EY + + F + P + + D + + ++L+ + Y H
Sbjct: 66 VVKFYGHRREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 152 GIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKE--YNVRVASRYFKGPELLVDLQ 208
GI HRD+KP N+++D E L++ D+GLA F + +E N + + PELL +
Sbjct: 124 GITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 209 DYDYSLDMWSLGCMFAGMIFRKEPF 233
+ +D+WS G + M+ + P+
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 90/201 (44%), Gaps = 47/201 (23%)
Query: 135 RYYIYELLKALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLA-EFYHPGKEYNVR 192
R+Y E++ ALDY HS+ +++RD+K N+M+D + +++ D+GL E G
Sbjct: 254 RFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKTF 312
Query: 193 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 252
+ + PE+L D DY ++D W LG + M+ + PF+ + +H++L ++
Sbjct: 313 CGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFY--NQDHEKLFEL------ 363
Query: 253 DELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQD 312
++ R P + PEA L LL+ D +
Sbjct: 364 --------------------ILMEEIRFP----------RTLGPEAKSLLSGLLKKDPKQ 393
Query: 313 RLT-----AREAMAHPYFAQV 328
RL A+E M H +FA +
Sbjct: 394 RLGGGSEDAKEIMQHRFFAGI 414
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 91/211 (43%), Gaps = 34/211 (16%)
Query: 138 IYELLKALDYCHSQGIMHRDVKPHNVMID--HELRKLRLIDWGLAEFYH--------PGK 187
+ ++ ALD+ H++GI HRD+KP N++ + ++ +++ D+ L
Sbjct: 117 VRDVAAALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTP 176
Query: 188 EYNVRVASRYFKGPELLVDLQD----YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQL 243
E S + PE++ D YD D+WSLG + M+ PF GH D
Sbjct: 177 ELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFV-GHCGADCG 235
Query: 244 VKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLD 303
+V NK + G++ +F + D H +S EA D +
Sbjct: 236 WDRGEV-----CRVCQNKLFESIQE------GKY------EFPDKDWAH-ISSEAKDLIS 277
Query: 304 KLLRYDHQDRLTAREAMAHPYFAQVRAAESS 334
KLL D + RL+A + + HP+ Q +A E
Sbjct: 278 KLLVRDAKQRLSAAQVLQHPW-VQGQAPEKG 307
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 91/201 (45%), Gaps = 47/201 (23%)
Query: 135 RYYIYELLKALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLA-EFYHPGKEYNVR 192
R+Y E++ ALDY HS+ +++RD+K N+M+D + +++ D+GL E G
Sbjct: 111 RFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKXF 169
Query: 193 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 252
+ + PE+L D DY ++D W LG + M+ + PF+ + +H++L ++
Sbjct: 170 CGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFY--NQDHEKLFEL------ 220
Query: 253 DELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQD 312
++ R P + + PEA L LL+ D +
Sbjct: 221 --------------------ILMEEIRFPRT----------LGPEAKSLLSGLLKKDPKQ 250
Query: 313 RLT-----AREAMAHPYFAQV 328
RL A+E M H +FA +
Sbjct: 251 RLGGGSEDAKEIMQHRFFAGI 271
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 72/134 (53%), Gaps = 7/134 (5%)
Query: 112 LIFEYVNSTDFKVLYPTLTDYDIR---YYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 168
+ EY+N D + +D+ +Y E++ L + HS+GI++RD+K N+++D +
Sbjct: 96 FVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKD 155
Query: 169 LRKLRLIDWGLAEFYHPG-KEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMI 227
+++ D+G+ + G + N + + PE+L+ Q Y++S+D WS G + M+
Sbjct: 156 -GHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLG-QKYNHSVDWWSFGVLLYEML 213
Query: 228 FRKEPFFYGHDNHD 241
+ P F+G D +
Sbjct: 214 IGQSP-FHGQDEEE 226
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 128 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA-EFYHPG 186
LT+ + RYY+ +++ Y H ++HRD+K N+ ++ +L ++++ D+GLA + + G
Sbjct: 117 ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDL-EVKIGDFGLATKVEYDG 175
Query: 187 KEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 233
+ + + PE+L + + + +D+WS+GC+ ++ K PF
Sbjct: 176 ERKKTLCGTPNYIAPEVLSK-KGHSFEVDVWSIGCIMYTLLVGKPPF 221
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 128 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA-EFYHPG 186
LT+ + RYY+ +++ Y H ++HRD+K N+ ++ +L ++++ D+GLA + + G
Sbjct: 113 ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDL-EVKIGDFGLATKVEYDG 171
Query: 187 KEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 233
+ + + PE+L + + + +D+WS+GC+ ++ K PF
Sbjct: 172 ERKKTLCGTPNYIAPEVLSK-KGHSFEVDVWSIGCIMYTLLVGKPPF 217
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 128 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA-EFYHPG 186
LT+ + RYY+ +++ Y H ++HRD+K N+ ++ +L ++++ D+GLA + + G
Sbjct: 113 ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDL-EVKIGDFGLATKVEYDG 171
Query: 187 KEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 233
+ + + PE+L + + + +D+WS+GC+ ++ K PF
Sbjct: 172 ERKKTLCGTPNYIAPEVLSK-KGHSFEVDVWSIGCIMYTLLVGKPPF 217
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 91/201 (45%), Gaps = 47/201 (23%)
Query: 135 RYYIYELLKALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLA-EFYHPGKEYNVR 192
R+Y E++ ALDY HS+ +++RD+K N+M+D + +++ D+GL E G
Sbjct: 112 RFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKXF 170
Query: 193 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 252
+ + PE+L D DY ++D W LG + M+ + PF+ + +H++L ++
Sbjct: 171 CGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFY--NQDHEKLFEL------ 221
Query: 253 DELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQD 312
++ R P + + PEA L LL+ D +
Sbjct: 222 --------------------ILMEEIRFPRT----------LGPEAKSLLSGLLKKDPKQ 251
Query: 313 RLT-----AREAMAHPYFAQV 328
RL A+E M H +FA +
Sbjct: 252 RLGGGSEDAKEIMQHRFFAGI 272
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 74/155 (47%), Gaps = 17/155 (10%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLT--------DYDIRYYIYELLKA 144
PN+V+ D + D+ + T ++ EY D + T ++ +R + +L A
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRV-MTQLTLA 123
Query: 145 LDYCHSQG-----IMHRDVKPHNVMIDHELRKLRLIDWGLAEFY-HPGKEYNVRVASRYF 198
L CH + ++HRD+KP NV +D + + ++L D+GLA H V + Y+
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGK-QNVKLGDFGLARILNHDTSFAKAFVGTPYY 182
Query: 199 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 233
PE + + Y+ D+WSLGC+ + PF
Sbjct: 183 MSPEQM-NRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 74/155 (47%), Gaps = 17/155 (10%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLT--------DYDIRYYIYELLKA 144
PN+V+ D + D+ + T ++ EY D + T ++ +R + +L A
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRV-MTQLTLA 123
Query: 145 LDYCHSQG-----IMHRDVKPHNVMIDHELRKLRLIDWGLAEFY-HPGKEYNVRVASRYF 198
L CH + ++HRD+KP NV +D + + ++L D+GLA H V + Y+
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGK-QNVKLGDFGLARILNHDTSFAKTFVGTPYY 182
Query: 199 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 233
PE + + Y+ D+WSLGC+ + PF
Sbjct: 183 MSPEQM-NRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 91/201 (45%), Gaps = 47/201 (23%)
Query: 135 RYYIYELLKALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLA-EFYHPGKEYNVR 192
R+Y E++ ALDY HS+ +++RD+K N+M+D + +++ D+GL E G
Sbjct: 113 RFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKXF 171
Query: 193 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 252
+ + PE+L D DY ++D W LG + M+ + PF+ + +H++L ++
Sbjct: 172 CGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFY--NQDHEKLFEL------ 222
Query: 253 DELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQD 312
++ R P + + PEA L LL+ D +
Sbjct: 223 --------------------ILMEEIRFPRT----------LGPEAKSLLSGLLKKDPKQ 252
Query: 313 RLT-----AREAMAHPYFAQV 328
RL A+E M H +FA +
Sbjct: 253 RLGGGSEDAKEIMQHRFFAGI 273
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 94/213 (44%), Gaps = 23/213 (10%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXX------XLQNLCG 91
+DY+VV+ +GRG + EV + + +++ +
Sbjct: 75 EDYDVVKVIGRGAFGEV-QLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN 133
Query: 92 GPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDI-----RYYIYELLKALD 146
P VV+L +D K ++ EY+ D L +++YD+ ++Y E++ ALD
Sbjct: 134 SPWVVQLFCAFQDD--KYLYMVMEYMPGGD---LVNLMSNYDVPEKWAKFYTAEVVLALD 188
Query: 147 YCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA-EFYHPGKEY-NVRVASRYFKGPELL 204
HS G++HRDVKP N+++D L+L D+G + G + + V + + PE+L
Sbjct: 189 AIHSMGLIHRDVKPDNMLLDKH-GHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVL 247
Query: 205 VDLQD---YDYSLDMWSLGCMFAGMIFRKEPFF 234
Y D WS+G M+ PF+
Sbjct: 248 KSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFY 280
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 86/201 (42%), Gaps = 33/201 (16%)
Query: 138 IYELLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYH--------PGK 187
+ ++ ALD+ H++GI HRD+KP N++ +H ++ +++ D+ L
Sbjct: 117 VQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTP 176
Query: 188 EYNVRVASRYFKGPELLVDLQD----YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQL 243
E S + PE++ + YD D+WSLG + ++ P F G D
Sbjct: 177 ELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILY-ILLSGYPPFVGRCGSD-- 233
Query: 244 VKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLD 303
G D A P ++ ++ +F + D H +S A D +
Sbjct: 234 ------CGWDRGEAC---------PACQNMLFESIQEGKYEFPDKDWAH-ISCAAKDLIS 277
Query: 304 KLLRYDHQDRLTAREAMAHPY 324
KLL D + RL+A + + HP+
Sbjct: 278 KLLVRDAKQRLSAAQVLQHPW 298
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 102/244 (41%), Gaps = 52/244 (21%)
Query: 93 PNVVKLLDIVRDQHSKTPS---LIFEYVNSTDFKVLYPTL------TDYDIRYYIYELLK 143
PN+V+ +++ TP+ +I EY + + LY + ++ + R++ +LL
Sbjct: 76 PNIVRFKEVIL-----TPTHLAIIMEYASGGE---LYERICNAGRFSEDEARFFFQQLLS 127
Query: 144 ALDYCHSQGIMHRDVKPHNVMID-HELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 202
+ YCHS I HRD+K N ++D +L++ D+G ++ + V + + PE
Sbjct: 128 GVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPE 187
Query: 203 LLVDLQDYDYSL-DMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNK 261
+L+ Q+YD + D+WS G M+ PF + D I ++L K
Sbjct: 188 VLLR-QEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSV--------K 238
Query: 262 YHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMA 321
Y + D + +SPE + ++ D R++ E
Sbjct: 239 YSIPDDIR------------------------ISPECCHLISRIFVADPATRISIPEIKT 274
Query: 322 HPYF 325
H +F
Sbjct: 275 HSWF 278
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 75/151 (49%), Gaps = 15/151 (9%)
Query: 94 NVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVL-------YPTLTDYDIRYYIYELLKALD 146
NV++L+D++ ++ + ++ EY ++L +P + Y +L+ L+
Sbjct: 67 NVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHG---YFCQLIDGLE 123
Query: 147 YCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP-GKEYNVRVA--SRYFKGPEL 203
Y HSQGI+H+D+KP N+++ L++ G+AE HP + R + S F+ PE+
Sbjct: 124 YLHSQGIVHKDIKPGNLLLTTG-GTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEI 182
Query: 204 LVDLQDYD-YSLDMWSLGCMFAGMIFRKEPF 233
L + + +D+WS G + PF
Sbjct: 183 ANGLDTFSGFKVDIWSAGVTLYNITTGLYPF 213
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 87/199 (43%), Gaps = 15/199 (7%)
Query: 91 GGPNVVKLLDIVRDQHSKTPSLIFEYVNST----DFKVLYPTLTDYDIRYYIYELLKALD 146
G V++LLD S LI E DF L + R + +++L+A+
Sbjct: 114 GFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 171
Query: 147 YCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 206
+CH+ G++HRD+K N++ID +L+LID+G Y +R + PE +
Sbjct: 172 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRY 230
Query: 207 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNA---YLNKYH 263
+ + S +WSLG + M+ PF HD+ + +V +++ +L ++
Sbjct: 231 HRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIRGQVFFRQRVSSECQHLIRWC 285
Query: 264 LELDPQLDALVGRHSRKPW 282
L L P PW
Sbjct: 286 LALRPSDRPTFEEIQNHPW 304
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 85/198 (42%), Gaps = 38/198 (19%)
Query: 130 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNV--MIDHELRKLRLIDWGLAEFYHPGK 187
T+ D I ++L A+ Y H GI+HRD+KP N+ + E K+ + D+GL++ G
Sbjct: 104 TEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGI 163
Query: 188 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 247
+ + + PE+L + Y ++D WS+G + ++ PF+ + +L +
Sbjct: 164 -MSTACGTPGYVAPEVLAQ-KPYSKAVDCWSIGVITYILLCGYPPFY--EETESKLFEKI 219
Query: 248 KVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLR 307
K Y Y E P D +S A DF+ LL
Sbjct: 220 K-------EGY---YEFE-SPFWDD---------------------ISESAKDFICHLLE 247
Query: 308 YDHQDRLTAREAMAHPYF 325
D +R T +A++HP+
Sbjct: 248 KDPNERYTCEKALSHPWI 265
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 84/190 (44%), Gaps = 40/190 (21%)
Query: 141 LLKALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 199
++KAL++ HS+ ++HRDVKP NV+I+ L +++ D+G++ + ++ + +
Sbjct: 145 IVKALEHLHSKLSVIHRDVKPSNVLINA-LGQVKXCDFGISGYLVDDVAKDIDAGCKPYX 203
Query: 200 GPELL---VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELN 256
PE + ++ + Y D+WSLG + + P+ QL ++ +
Sbjct: 204 APERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVE-------- 255
Query: 257 AYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTA 316
E PQL P KF S E +DF + L+ + ++R T
Sbjct: 256 --------EPSPQL----------PADKF---------SAEFVDFTSQCLKKNSKERPTY 288
Query: 317 REAMAHPYFA 326
E HP+F
Sbjct: 289 PELXQHPFFT 298
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 194
++Y E+ AL+Y HS+ I++RD+KP N+++D +++ D+G A+ Y P Y +
Sbjct: 109 KFYAAEVCLALEYLHSKDIIYRDLKPENILLDKN-GHIKITDFGFAK-YVPDVTYXLCGT 166
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 234
Y PE +V + Y+ S+D WS G + M+ PF+
Sbjct: 167 PDYI-APE-VVSTKPYNKSIDWWSFGILIYEMLAGYTPFY 204
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 47/227 (20%)
Query: 140 ELLKALDYCHSQ-GIMHRDVKPHNVMID-----HELRKLRLIDWGLAEFYHPGKEYNVRV 193
+LL LDY H + GI+H D+KP NV+++ L ++++ D G A +Y + Y +
Sbjct: 139 QLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYD--EHYTNSI 196
Query: 194 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMI---FRKEPFFYGHD---NHDQLVKIA 247
+R ++ PE+L+ + D+WS C+ +I F EP GH + D + +I
Sbjct: 197 QTREYRSPEVLLG-APWGCGADIWSTACLIFELITGDFLFEP-DEGHSYTKDDDHIAQII 254
Query: 248 KVLGTDELNAYL------------------NKYHLELDPQLDALVGRHSRKPWSKFINAD 289
++LG EL +YL N L+ P D L ++ KF +
Sbjct: 255 ELLG--ELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKY------KFSKDE 306
Query: 290 NQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQVRAAESSRT 336
+ E DFL +L+ D + R A + HP+ E R
Sbjct: 307 -----AKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEEIRV 348
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 47/227 (20%)
Query: 140 ELLKALDYCHSQ-GIMHRDVKPHNVMID-----HELRKLRLIDWGLAEFYHPGKEYNVRV 193
+LL LDY H + GI+H D+KP NV+++ L ++++ D G A +Y + Y +
Sbjct: 139 QLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYD--EHYTNSI 196
Query: 194 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMI---FRKEPFFYGHD---NHDQLVKIA 247
+R ++ PE+L+ + D+WS C+ +I F EP GH + D + +I
Sbjct: 197 QTREYRSPEVLLG-APWGCGADIWSTACLIFELITGDFLFEP-DEGHSYTKDDDHIAQII 254
Query: 248 KVLGTDELNAYL------------------NKYHLELDPQLDALVGRHSRKPWSKFINAD 289
++LG EL +YL N L+ P D L ++ KF +
Sbjct: 255 ELLG--ELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKY------KFSKDE 306
Query: 290 NQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQVRAAESSRT 336
+ E DFL +L+ D + R A + HP+ E R
Sbjct: 307 -----AKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEEIRV 348
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 128 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA-EFYHPG 186
+T+ + RY++ + ++ + Y H+ ++HRD+K N+ ++ ++ +++ D+GLA + G
Sbjct: 138 AVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDM-DVKIGDFGLATKIEFDG 196
Query: 187 KEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 233
+ + + PE+L + + + +D+WSLGC+ ++ K PF
Sbjct: 197 ERKKTLCGTPNYIAPEVLCK-KGHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 75/158 (47%), Gaps = 19/158 (12%)
Query: 94 NVVKLLDIVRD-QHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRY---------------Y 137
NV K L I++ +H +L + + + D ++ L D+RY +
Sbjct: 61 NVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLF 120
Query: 138 IYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY 197
I EL+ ALDY +Q I+HRD+KP N+++D E + + D+ +A + ++
Sbjct: 121 ICELVMALDYLQNQRIIHRDMKPDNILLD-EHGHVHITDFNIAAMLPRETQITTMAGTKP 179
Query: 198 FKGPELLVDLQ--DYDYSLDMWSLGCMFAGMIFRKEPF 233
+ PE+ + Y +++D WSLG ++ + P+
Sbjct: 180 YMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPY 217
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 194
R+Y E+ AL Y HS I++RD+KP N+++D + + L D+GL + E+N
Sbjct: 142 RFYAAEIASALGYLHSLNIVYRDLKPENILLDSQ-GHIVLTDFGLCK---ENIEHN-STT 196
Query: 195 SRYFKGPELLVD----LQDYDYSLDMWSLGCMFAGMIFRKEPFF 234
S + PE L Q YD ++D W LG + M++ PF+
Sbjct: 197 STFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFY 240
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 87/211 (41%), Gaps = 50/211 (23%)
Query: 128 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 187
++ ++ + Y +L+A+ H GI+H D+KP N +I + L+LID+G+A P
Sbjct: 107 SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM--LKLIDFGIANQMQPDT 164
Query: 188 EYNVR---VASRYFKGPELLVDLQD----------YDYSLDMWSLGCMFAGMIFRKEPFF 234
V+ V + + PE + D+ D+WSLGC+ M + K PF
Sbjct: 165 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF- 223
Query: 235 YGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLV 294
++ ++K H +DP + +F + + L
Sbjct: 224 ------------------QQIINQISKLHAIIDPNHEI-----------EFPDIPEKDLQ 254
Query: 295 SPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 325
D L L+ D + R++ E +AHPY
Sbjct: 255 -----DVLKCCLKRDPKQRISIPELLAHPYV 280
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 87/210 (41%), Gaps = 50/210 (23%)
Query: 128 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 187
++ ++ + Y +L+A+ H GI+H D+KP N +I + L+LID+G+A P
Sbjct: 104 SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM--LKLIDFGIANQMQPDT 161
Query: 188 EYNVR---VASRYFKGPELLVDLQD----------YDYSLDMWSLGCMFAGMIFRKEPFF 234
V+ V + + PE + D+ D+WSLGC+ M + K PF
Sbjct: 162 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF- 220
Query: 235 YGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLV 294
++ ++K H +DP + +F + + L
Sbjct: 221 ------------------QQIINQISKLHAIIDPNHEI-----------EFPDIPEKDLQ 251
Query: 295 SPEAIDFLDKLLRYDHQDRLTAREAMAHPY 324
D L L+ D + R++ E +AHPY
Sbjct: 252 -----DVLKCCLKRDPKQRISIPELLAHPY 276
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 87/211 (41%), Gaps = 50/211 (23%)
Query: 128 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 187
++ ++ + Y +L+A+ H GI+H D+KP N +I + L+LID+G+A P
Sbjct: 103 SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM--LKLIDFGIANQMQPDT 160
Query: 188 EYNVR---VASRYFKGPELLVDLQD----------YDYSLDMWSLGCMFAGMIFRKEPFF 234
V+ V + + PE + D+ D+WSLGC+ M + K PF
Sbjct: 161 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF- 219
Query: 235 YGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLV 294
++ ++K H +DP + +F + + L
Sbjct: 220 ------------------QQIINQISKLHAIIDPNHEI-----------EFPDIPEKDLQ 250
Query: 295 SPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 325
D L L+ D + R++ E +AHPY
Sbjct: 251 -----DVLKCCLKRDPKQRISIPELLAHPYV 276
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 131 DYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA-EFYHPGKEY 189
++ I + E+LK LDY HS+ +HRD+K NV++ E ++L D+G+A + +
Sbjct: 119 EFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLS-EQGDVKLADFGVAGQLTDTQIKR 177
Query: 190 NVRVASRYFKGPELLVDLQDYDYSLDMWSLG 220
N V + ++ PE ++ YD D+WSLG
Sbjct: 178 NTFVGTPFWMAPE-VIQQSAYDSKADIWSLG 207
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 128 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA-EFYHPG 186
+T+ + RY++ + ++ + Y H+ ++HRD+K N+ ++ ++ +++ D+GLA + G
Sbjct: 138 AVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDM-DVKIGDFGLATKIEFDG 196
Query: 187 KEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 233
+ + + PE+L + + + +D+WSLGC+ ++ K PF
Sbjct: 197 ERKKXLCGTPNYIAPEVLCK-KGHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 87/211 (41%), Gaps = 50/211 (23%)
Query: 128 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 187
++ ++ + Y +L+A+ H GI+H D+KP N +I + L+LID+G+A P
Sbjct: 151 SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM--LKLIDFGIANQMQPDT 208
Query: 188 EYNVR---VASRYFKGPELLVDLQD----------YDYSLDMWSLGCMFAGMIFRKEPFF 234
V+ V + + PE + D+ D+WSLGC+ M + K PF
Sbjct: 209 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF- 267
Query: 235 YGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLV 294
++ ++K H +DP + +F + + L
Sbjct: 268 ------------------QQIINQISKLHAIIDPNHEI-----------EFPDIPEKDLQ 298
Query: 295 SPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 325
D L L+ D + R++ E +AHPY
Sbjct: 299 -----DVLKCCLKRDPKQRISIPELLAHPYV 324
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 55/111 (49%), Gaps = 7/111 (6%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 188
L + I + E+L+ L+Y H G +HRDVK N+++ + +++ D+G++ F G +
Sbjct: 113 LDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGED-GSVQIADFGVSAFLATGGD 171
Query: 189 YNVRVASRYFKG------PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 233
+ F G PE++ ++ YD+ D+WS G + P+
Sbjct: 172 ITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY 222
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 88/211 (41%), Gaps = 50/211 (23%)
Query: 128 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 187
++ ++ + Y +L+A+ H GI+H D+KP N +I + L+LID+G+A P
Sbjct: 151 SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM--LKLIDFGIANQMQPDT 208
Query: 188 EYNVR---VASRYFKGPELLVDLQD----------YDYSLDMWSLGCMFAGMIFRKEPFF 234
V+ V + + PE + D+ D+WSLGC+ M + K PF
Sbjct: 209 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF- 267
Query: 235 YGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLV 294
Q++ ++K H +DP + +F + + L
Sbjct: 268 ------QQIIN------------QISKLHAIIDPNHEI-----------EFPDIPEKDLQ 298
Query: 295 SPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 325
D L L+ D + R++ E +AHPY
Sbjct: 299 -----DVLKCCLKRDPKQRISIPELLAHPYV 324
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 55/111 (49%), Gaps = 7/111 (6%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 188
L + I + E+L+ L+Y H G +HRDVK N+++ + +++ D+G++ F G +
Sbjct: 118 LDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGED-GSVQIADFGVSAFLATGGD 176
Query: 189 YNVRVASRYFKG------PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 233
+ F G PE++ ++ YD+ D+WS G + P+
Sbjct: 177 ITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY 227
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 87/210 (41%), Gaps = 50/210 (23%)
Query: 128 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 187
++ ++ + Y +L+A+ H GI+H D+KP N +I + L+LID+G+A P
Sbjct: 123 SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM--LKLIDFGIANQMQPDT 180
Query: 188 EYNVR---VASRYFKGPELLVDLQD----------YDYSLDMWSLGCMFAGMIFRKEPFF 234
V+ V + + PE + D+ D+WSLGC+ M + K PF
Sbjct: 181 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF- 239
Query: 235 YGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLV 294
++ ++K H +DP + +F + + L
Sbjct: 240 ------------------QQIINQISKLHAIIDPNHEI-----------EFPDIPEKDLQ 270
Query: 295 SPEAIDFLDKLLRYDHQDRLTAREAMAHPY 324
D L L+ D + R++ E +AHPY
Sbjct: 271 -----DVLKCCLKRDPKQRISIPELLAHPY 295
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 88/211 (41%), Gaps = 50/211 (23%)
Query: 128 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 187
++ ++ + Y +L+A+ H GI+H D+KP N +I + L+LID+G+A P
Sbjct: 151 SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM--LKLIDFGIANQMQPDT 208
Query: 188 EYNVR---VASRYFKGPELLVDLQD----------YDYSLDMWSLGCMFAGMIFRKEPFF 234
V+ V + + PE + D+ D+WSLGC+ M + K PF
Sbjct: 209 TSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF- 267
Query: 235 YGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLV 294
Q++ ++K H +DP + +F + + L
Sbjct: 268 ------QQIIN------------QISKLHAIIDPNHEI-----------EFPDIPEKDLQ 298
Query: 295 SPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 325
D L L+ D + R++ E +AHPY
Sbjct: 299 -----DVLKCCLKRDPKQRISIPELLAHPYV 324
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 87/210 (41%), Gaps = 50/210 (23%)
Query: 128 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 187
++ ++ + Y +L+A+ H GI+H D+KP N +I + L+LID+G+A P
Sbjct: 123 SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM--LKLIDFGIANQMQPDX 180
Query: 188 EYNVR---VASRYFKGPELLVDLQD----------YDYSLDMWSLGCMFAGMIFRKEPFF 234
V+ V + + PE + D+ D+WSLGC+ M + K PF
Sbjct: 181 XXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF- 239
Query: 235 YGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLV 294
++ ++K H +DP + +F + + L
Sbjct: 240 ------------------QQIINQISKLHAIIDPNHEI-----------EFPDIPEKDLQ 270
Query: 295 SPEAIDFLDKLLRYDHQDRLTAREAMAHPY 324
D L L+ D + R++ E +AHPY
Sbjct: 271 -----DVLKCCLKRDPKQRISIPELLAHPY 295
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 90/211 (42%), Gaps = 15/211 (7%)
Query: 38 DDYEVVRKV-GRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGGPNVV 96
DDY+V +V G G +V + N T E+ + C P++V
Sbjct: 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKXLQDCPKARREVELHWRASQC--PHIV 118
Query: 97 KLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYI----YELLK----ALDYC 148
+++D+ + ++ L+ D L+ + D + + E+ K A+ Y
Sbjct: 119 RIVDVYENLYAGRKCLLI-VXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYL 177
Query: 149 HSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 206
HS I HRDVKP N++ + L+L D+G A+ + Y+ PE+L
Sbjct: 178 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL-G 236
Query: 207 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGH 237
+ YD S D WSLG + ++ PF+ H
Sbjct: 237 PEKYDKSCDXWSLGVIXYILLCGYPPFYSNH 267
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 67/133 (50%), Gaps = 9/133 (6%)
Query: 108 KTPSLIF---EYVNSTDFKVLYPTLTDYD---IRYYIYELLKALDYCHSQGIMHRDVKPH 161
+TP +F E+VN D +D R+Y E++ AL + H +GI++RD+K
Sbjct: 94 QTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLD 153
Query: 162 NVMIDHELRKLRLIDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLG 220
NV++DHE +L D+G+ E G + + PE+L ++ Y ++D W++G
Sbjct: 154 NVLLDHE-GHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEML-YGPAVDWWAMG 211
Query: 221 CMFAGMIFRKEPF 233
+ M+ PF
Sbjct: 212 VLLYEMLCGHAPF 224
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 128 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA-EFYHPG 186
+T+ + RY++ + ++ + Y H+ ++HRD+K N+ ++ ++ +++ D+GLA + G
Sbjct: 138 AVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDM-DVKIGDFGLATKIEFDG 196
Query: 187 KEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 233
+ + + PE+L + + + +D+WSLGC+ ++ K PF
Sbjct: 197 ERKKDLCGTPNYIAPEVLCK-KGHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 12/121 (9%)
Query: 134 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRV 193
I +Y ++L+ L Y H I+HRD+K NV+I+ L++ D+G ++ + +
Sbjct: 124 IGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSK-----RLAGINP 178
Query: 194 ASRYFKG------PELL-VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKI 246
+ F G PE++ + Y + D+WSLGC M K PF+ + + K+
Sbjct: 179 CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKV 238
Query: 247 A 247
Sbjct: 239 G 239
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 12/121 (9%)
Query: 134 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRV 193
I +Y ++L+ L Y H I+HRD+K NV+I+ L++ D+G ++ + +
Sbjct: 110 IGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSK-----RLAGINP 164
Query: 194 ASRYFKG------PELL-VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKI 246
+ F G PE++ + Y + D+WSLGC M K PF+ + + K+
Sbjct: 165 CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKV 224
Query: 247 A 247
Sbjct: 225 G 225
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 128 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA-EFYHPG 186
+T+ + RY++ + ++ + Y H+ ++HRD+K N+ ++ ++ +++ D+GLA + G
Sbjct: 122 AVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDM-DVKIGDFGLATKIEFDG 180
Query: 187 KEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 233
+ + + PE+L + + + +D+WSLGC+ ++ K PF
Sbjct: 181 ERKKDLCGTPNYIAPEVLCK-KGHSFEVDIWSLGCILYTLLVGKPPF 226
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 68/154 (44%), Gaps = 13/154 (8%)
Query: 93 PNVVKLLDIVRDQHSKTPS----LIFEYVNSTDFKVLYPT------LTDYDIRYYIYELL 142
PNVV ++ P+ L EY D + L + IR + ++
Sbjct: 72 PNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDIS 131
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKL--RLIDWGLAEFYHPGKEYNVRVASRYFKG 200
AL Y H I+HRD+KP N+++ ++L ++ID G A+ G+ V + +
Sbjct: 132 SALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLA 191
Query: 201 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 234
PELL + + Y ++D WS G + I PF
Sbjct: 192 PELL-EQKKYTVTVDYWSFGTLAFECITGFRPFL 224
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 68/154 (44%), Gaps = 13/154 (8%)
Query: 93 PNVVKLLDIVRDQHSKTPS----LIFEYVNSTDFKVLYPT------LTDYDIRYYIYELL 142
PNVV ++ P+ L EY D + L + IR + ++
Sbjct: 73 PNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDIS 132
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKL--RLIDWGLAEFYHPGKEYNVRVASRYFKG 200
AL Y H I+HRD+KP N+++ ++L ++ID G A+ G+ V + +
Sbjct: 133 SALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLA 192
Query: 201 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 234
PELL + + Y ++D WS G + I PF
Sbjct: 193 PELL-EQKKYTVTVDYWSFGTLAFECITGFRPFL 225
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 58/100 (58%), Gaps = 4/100 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 194
R+Y +++ +Y HS +++RD+KP N+MID + +++ D+GLA+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQ-GYIKVTDFGLAKRVK-GRTWXLCGT 201
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 234
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 202 PEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 58/100 (58%), Gaps = 4/100 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 194
R+Y +++ +Y HS +++RD+KP N+MID + +++ D+GLA+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQ-GYIQVTDFGLAKRVK-GRTWXLCGT 201
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 234
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 202 PEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 126/279 (45%), Gaps = 36/279 (12%)
Query: 38 DDYEVVRKVGRGKYSEVF---EGIN--VNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
DD+++VR +G+GK+ V+ E N + + +Q+
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRY-------YIYELLKAL 145
PN++++ + D+ K L+ E+ + LY L + R+ ++ EL AL
Sbjct: 74 PNILRMYNYFHDR--KRIYLMLEFAPRGE---LYKELQKHG-RFDEQRSATFMEELADAL 127
Query: 146 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLV 205
YCH + ++HRD+KP N+++ ++ +L++ D+G + + P + + PE ++
Sbjct: 128 HYCHERKVIHRDIKPENLLMGYK-GELKIADFGWS-VHAPSLRRRXMCGTLDYLPPE-MI 184
Query: 206 DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGH--DNHDQLV----KIAKVL--GTDELNA 257
+ + +D +D+W G + + PF + H ++V K L G+ +L +
Sbjct: 185 EGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLIS 244
Query: 258 YLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSP 296
L +YH PQ L G PW + A+++ ++ P
Sbjct: 245 KLLRYH---PPQRLPLKGVMEH-PW---VKANSRRVLPP 276
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 57/106 (53%), Gaps = 7/106 (6%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA-EFYHPGK-EYNVR 192
R+YI E++ A+D H +HRD+KP NV++D +RL D+G + G + +V
Sbjct: 194 RFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVN-GHIRLADFGSCLKMNDDGTVQSSVA 252
Query: 193 VASRYFKGPELLVDLQD----YDYSLDMWSLGCMFAGMIFRKEPFF 234
V + + PE+L ++D Y D WSLG M++ + PF+
Sbjct: 253 VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFY 298
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 57/106 (53%), Gaps = 7/106 (6%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWG-LAEFYHPGK-EYNVR 192
R+YI E++ A+D H +HRD+KP NV++D +RL D+G + G + +V
Sbjct: 178 RFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVN-GHIRLADFGSCLKMNDDGTVQSSVA 236
Query: 193 VASRYFKGPELLVDLQD----YDYSLDMWSLGCMFAGMIFRKEPFF 234
V + + PE+L ++D Y D WSLG M++ + PF+
Sbjct: 237 VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFY 282
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 6/111 (5%)
Query: 128 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGL-AEFYHPG 186
TL + I Y E+L+ L + H ++HRD+K NV++ E +++L+D+G+ A+
Sbjct: 125 TLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLT-ENAEVKLVDFGVSAQLDRTV 183
Query: 187 KEYNVRVASRYFKGPELLVDLQD----YDYSLDMWSLGCMFAGMIFRKEPF 233
N + + Y+ PE++ ++ YD+ D+WSLG M P
Sbjct: 184 GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 234
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 16/146 (10%)
Query: 110 PSLIFEYVNSTDFKVLYPT---LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID 166
P ++ EYV+ + + T +T I + +AL++ H GI+HRDVKP N+MI
Sbjct: 91 PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS 150
Query: 167 HELRKLRLIDWGLAEFYHPGKEYNVRVA-----SRYFKGPELLVDLQDYDYSLDMWSLGC 221
++++D+G+A + A ++Y + D D D++SLGC
Sbjct: 151 -ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD--SVDARSDVYSLGC 207
Query: 222 MFAGMIFRKEPFFYGHDNHDQLVKIA 247
+ + EP F G D V +A
Sbjct: 208 VLY-EVLTGEPPFTG----DSPVSVA 228
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 16/146 (10%)
Query: 110 PSLIFEYVNSTDFKVLYPT---LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID 166
P ++ EYV+ + + T +T I + +AL++ H GI+HRDVKP N+MI
Sbjct: 91 PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS 150
Query: 167 HELRKLRLIDWGLAEFYHPGKEYNVRVA-----SRYFKGPELLVDLQDYDYSLDMWSLGC 221
++++D+G+A + A ++Y + D D D++SLGC
Sbjct: 151 -ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD--SVDARSDVYSLGC 207
Query: 222 MFAGMIFRKEPFFYGHDNHDQLVKIA 247
+ + EP F G D V +A
Sbjct: 208 VLY-EVLTGEPPFTG----DSPVSVA 228
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 16/146 (10%)
Query: 110 PSLIFEYVNSTDFKVLYPT---LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID 166
P ++ EYV+ + + T +T I + +AL++ H GI+HRDVKP N+MI
Sbjct: 91 PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS 150
Query: 167 HELRKLRLIDWGLAEFYHPGKEYNVRVA-----SRYFKGPELLVDLQDYDYSLDMWSLGC 221
++++D+G+A + A ++Y + D D D++SLGC
Sbjct: 151 -ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD--SVDARSDVYSLGC 207
Query: 222 MFAGMIFRKEPFFYGHDNHDQLVKIA 247
+ + EP F G D V +A
Sbjct: 208 VLY-EVLTGEPPFTG----DSPVSVA 228
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 13/143 (9%)
Query: 110 PSLIFEYVNSTDFKVLYPT---LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID 166
P ++ EYV+ + + T +T I + +AL++ H GI+HRDVKP N+MI
Sbjct: 91 PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS 150
Query: 167 HELRKLRLIDWGLAEFYHPGKEYNVRVA-----SRYFKGPELLVDLQDYDYSLDMWSLGC 221
++++D+G+A + A ++Y + D D D++SLGC
Sbjct: 151 -ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD--SVDARSDVYSLGC 207
Query: 222 MFAGMIFRKEPFFYGHDNHDQLV 244
+ + EP F G D+ D +
Sbjct: 208 VLY-EVLTGEPPFTG-DSPDSVA 228
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 94/210 (44%), Gaps = 15/210 (7%)
Query: 33 IFSDQDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNLC-G 91
I D D YE+V+ +G G + + +NE + +
Sbjct: 14 IMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLR 73
Query: 92 GPNVVKLLDIVRDQHSKTPS---LIFEYVNSTD-FKVLYPT--LTDYDIRYYIYELLKAL 145
PN+V+ +++ TP+ ++ EY + + F+ + ++ + R++ +L+ +
Sbjct: 74 HPNIVRFKEVIL-----TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGV 128
Query: 146 DYCHSQGIMHRDVKPHNVMID-HELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELL 204
YCH+ + HRD+K N ++D +L++ D+G ++ + V + + PE+L
Sbjct: 129 SYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL 188
Query: 205 VDLQDYDYSL-DMWSLGCMFAGMIFRKEPF 233
+ ++YD + D+WS G M+ PF
Sbjct: 189 LK-KEYDGKVADVWSCGVTLYVMLVGAYPF 217
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 11/132 (8%)
Query: 110 PSLIFEYVNSTDFKVLYPT---LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID 166
P ++ EYV+ + + T +T I + +AL++ H GI+HRDVKP N+MI
Sbjct: 108 PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS 167
Query: 167 HELRKLRLIDWGLAEFYHPGKEYNVRVA-----SRYFKGPELLVDLQDYDYSLDMWSLGC 221
++++D+G+A + A ++Y + D D D++SLGC
Sbjct: 168 -ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD--SVDARSDVYSLGC 224
Query: 222 MFAGMIFRKEPF 233
+ ++ + PF
Sbjct: 225 VLYEVLTGEPPF 236
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 24/174 (13%)
Query: 90 CGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLY--PTLTDYDIRYYIYELLKALDY 147
C PN+VKLLD +++ + F + D +L LT+ I+ + L AL+Y
Sbjct: 64 CDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNY 123
Query: 148 CHSQGIMHRDVKPHNVM--IDHELRKLRLIDWGLAEFYHPGKEYNVRVASR-------YF 198
H I+HRD+K N++ +D +++ LA+F K + R Y+
Sbjct: 124 LHDNKIIHRDLKAGNILFTLDGDIK--------LADFGVSAKNTRTXIQRRDSFIGTPYW 175
Query: 199 KGPELLV----DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
PE+++ + YDY D+WSLG M EP + + L+KIAK
Sbjct: 176 MAPEVVMCETSKDRPYDYKADVWSLGITLIEMA-EIEPPHHELNPMRVLLKIAK 228
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 94/210 (44%), Gaps = 15/210 (7%)
Query: 33 IFSDQDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNLC-G 91
I D D YE+V+ +G G + + +NE + +
Sbjct: 13 IMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLR 72
Query: 92 GPNVVKLLDIVRDQHSKTPS---LIFEYVNSTD-FKVLYPT--LTDYDIRYYIYELLKAL 145
PN+V+ +++ TP+ ++ EY + + F+ + ++ + R++ +L+ +
Sbjct: 73 HPNIVRFKEVIL-----TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGV 127
Query: 146 DYCHSQGIMHRDVKPHNVMID-HELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELL 204
YCH+ + HRD+K N ++D +L++ D+G ++ + V + + PE+L
Sbjct: 128 SYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL 187
Query: 205 VDLQDYDYSL-DMWSLGCMFAGMIFRKEPF 233
+ ++YD + D+WS G M+ PF
Sbjct: 188 LK-KEYDGKVADVWSCGVTLYVMLVGAYPF 216
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 194
R+Y +++ +Y HS +++RD+KP N+MID + +++ D+G A+ G+ + +
Sbjct: 145 RFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQ-GYIKVTDFGFAKRVK-GRTWXLCGT 202
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 234
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 203 PEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 194
R+Y +++ +Y HS +++RD+KP N+MID + +++ D+G A+ G+ + +
Sbjct: 145 RFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQ-GYIKVTDFGFAKRVK-GRTWXLCGT 202
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 234
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 203 PEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 194
R+Y +++ +Y HS +++RD+KP N+MID + +++ D+G A+ G+ + +
Sbjct: 145 RFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQ-GYIKVTDFGFAKRVK-GRTWXLCGT 202
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 234
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 203 PEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 194
R+Y +++ +Y HS +++RD+KP N+MID + +++ D+G A+ G+ + +
Sbjct: 145 RFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQ-GYIKVTDFGFAKRVK-GRTWXLCGT 202
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 234
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 203 PEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 194
R+Y +++ +Y HS +++RD+KP N+MID + +++ D+G A+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQ-GYIKVTDFGFAKRVK-GRTWXLCGT 201
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 234
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 202 PEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 194
R+Y +++ +Y HS +++RD+KP N+MID + +++ D+G A+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQ-GYIKVTDFGFAKRVK-GRTWXLCGT 201
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 234
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 202 PEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 194
R+Y +++ +Y HS +++RD+KP N+MID + +++ D+G A+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQ-GYIQVTDFGFAKRVK-GRTWXLCGT 201
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 234
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 202 PEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 117/301 (38%), Gaps = 66/301 (21%)
Query: 38 DDYEVVRKV-GRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGGPNVV 96
DDY+V +V G G +V + N T E+ + C P++V
Sbjct: 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC--PHIV 74
Query: 97 KLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYI----YELLK----ALDYC 148
+++D+ + ++ L+ + D L+ + D + + E++K A+ Y
Sbjct: 75 RIVDVYENLYAGRKCLLI-VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 133
Query: 149 HSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 206
HS I HRDVKP N++ + L+L D+G A KE
Sbjct: 134 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA------KETTG--------------- 172
Query: 207 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLEL 266
+ YD S DMWSLG + ++ PF+ H + I+ + T + +Y
Sbjct: 173 -EKYDKSCDMWSLGVIMYILLCGYPPFYSNHG-----LAISPGMKT---RIRMGQYEFP- 222
Query: 267 DPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFA 326
+P+ WS+ VS E + LL+ + R+T E M HP+
Sbjct: 223 NPE------------WSE---------VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM 261
Query: 327 Q 327
Q
Sbjct: 262 Q 262
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 67/146 (45%), Gaps = 16/146 (10%)
Query: 110 PSLIFEYVNSTDFKVLYPT---LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID 166
P ++ EYV+ + + T +T I + +AL++ H GI+HRDVKP N++I
Sbjct: 91 PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANILIS 150
Query: 167 HELRKLRLIDWGLAEFYHPGKEYNVRVA-----SRYFKGPELLVDLQDYDYSLDMWSLGC 221
++++D+G+A + A ++Y + D D D++SLGC
Sbjct: 151 -ATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGD--SVDARSDVYSLGC 207
Query: 222 MFAGMIFRKEPFFYGHDNHDQLVKIA 247
+ + EP F G D V +A
Sbjct: 208 VLY-EVLTGEPPFTG----DSPVSVA 228
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 194
R+Y +++ +Y HS +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKRVK-GRTWXLAGT 201
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 234
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 202 PEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 194
R+Y +++ +Y HS +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKRVK-GRTWXLXGT 201
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 234
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 202 PEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 55/106 (51%), Gaps = 7/106 (6%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWG--LAEFYHPGKEYNVR 192
R+Y+ E++ A+D H +HRD+KP N+++D +RL D+G L + +V
Sbjct: 178 RFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMN-GHIRLADFGSCLKLMEDGTVQSSVA 236
Query: 193 VASRYFKGPELLVDLQD----YDYSLDMWSLGCMFAGMIFRKEPFF 234
V + + PE+L ++ Y D WSLG M++ + PF+
Sbjct: 237 VGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFY 282
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 194
R+Y +++ +Y HS +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLIIDQQ-GYIQVTDFGFAKRVK-GRTWXLCGT 201
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 234
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 202 PEYL-APEIIIS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 194
R+Y +++ +Y HS +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 145 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKRVK-GRTWTLCGT 202
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 234
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 203 PEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 70/133 (52%), Gaps = 8/133 (6%)
Query: 94 NVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYP--TLTDYDIRYYIYELLKALDYCHSQ 151
+++K DQ K+ L+ EYV + P ++ + + ++ + + Y HSQ
Sbjct: 77 HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHSQ 136
Query: 152 GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE-YNVRV---ASRYFKGPELLVDL 207
+HR++ NV++D++ R +++ D+GLA+ G E Y VR + ++ PE L +
Sbjct: 137 HYIHRNLAARNVLLDND-RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEY 195
Query: 208 QDYDYSLDMWSLG 220
+ Y Y+ D+WS G
Sbjct: 196 KFY-YASDVWSFG 207
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 194
R+Y +++ +Y HS +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 130 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKRVK-GRTWTLCGT 187
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 234
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 188 PEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 225
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 194
R+Y +++ +Y HS +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKRVK-GRTWXLCGT 201
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 234
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 202 PEYL-APEIILS-KGYNKAVDWWALGVLIYQMAAGYPPFF 239
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 194
R+Y +++ +Y HS +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKRVK-GRTWXLCGT 201
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 234
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 202 PEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 125/279 (44%), Gaps = 36/279 (12%)
Query: 38 DDYEVVRKVGRGKYSEVF---EGIN--VNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
DD+++ R +G+GK+ V+ E N + + +Q+
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRY-------YIYELLKAL 145
PN++++ + D+ K L+ E+ + LY L + R+ ++ EL AL
Sbjct: 74 PNILRMYNYFHDR--KRIYLMLEFAPRGE---LYKELQKHG-RFDEQRSATFMEELADAL 127
Query: 146 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLV 205
YCH + ++HRD+KP N+++ ++ +L++ D+G + + P + + PE ++
Sbjct: 128 HYCHERKVIHRDIKPENLLMGYK-GELKIADFGWS-VHAPSLRRRXMCGTLDYLPPE-MI 184
Query: 206 DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGH--DNHDQLV----KIAKVL--GTDELNA 257
+ + +D +D+W G + + PF + H ++V K L G+ +L +
Sbjct: 185 EGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLIS 244
Query: 258 YLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSP 296
L +YH PQ L G PW + A+++ ++ P
Sbjct: 245 KLLRYH---PPQRLPLKGVMEH-PW---VKANSRRVLPP 276
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 53/89 (59%), Gaps = 4/89 (4%)
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGL-AEFYHPGKEYNVRVASRYF 198
++ K +DY HS+ ++HRD+KP N+ + + +++++ D+GL + GK + RY
Sbjct: 144 QITKGVDYIHSKKLIHRDLKPSNIFL-VDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYM 202
Query: 199 KGPELLVDLQDYDYSLDMWSLGCMFAGMI 227
PE + QDY +D+++LG + A ++
Sbjct: 203 -SPE-QISSQDYGKEVDLYALGLILAELL 229
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 194
R+Y +++ +Y HS +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKRVK-GRTWXLCGT 201
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 234
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 202 PEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 194
R+Y +++ +Y HS +++RD+KP N++ID E +++ D+G A+ G+ + +
Sbjct: 131 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-EQGYIQVTDFGFAKRVK-GRTWXLCGT 188
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 234
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 189 PEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 226
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 194
R+Y +++ +Y HS +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 145 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ-GYIKVADFGFAKRVK-GRTWXLCGT 202
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 234
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 203 PEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 194
R+Y +++ +Y HS +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKRVK-GRTWXLCGT 201
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 234
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 202 PEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 194
R+Y +++ +Y HS +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 145 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKRVK-GRTWXLCGT 202
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 234
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 203 PEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 194
R+Y +++ +Y HS +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKRVK-GRTWXLCGT 201
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 234
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 202 PEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 194
R+Y +++ +Y HS +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ-GYIKVADFGFAKRVK-GRTWXLCGT 201
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 234
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 202 PEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 194
R+Y +++ +Y HS +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKRVK-GRTWXLCGT 201
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 234
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 202 PEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 194
R+Y +++ +Y HS +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKRVK-GRTWXLCGT 201
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 234
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 202 PEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 194
R+Y +++ +Y HS +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKRVK-GRTWXLCGT 201
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 234
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 202 PEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 194
R+Y +++ +Y HS +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKRVK-GRTWXLCGT 201
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 234
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 202 PEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 125/279 (44%), Gaps = 36/279 (12%)
Query: 38 DDYEVVRKVGRGKYSEVF---EGIN--VNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
DD+++ R +G+GK+ V+ E N + + +Q+
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRY-------YIYELLKAL 145
PN++++ + D+ K L+ E+ + LY L + R+ ++ EL AL
Sbjct: 75 PNILRMYNYFHDR--KRIYLMLEFAPRGE---LYKELQKHG-RFDEQRSATFMEELADAL 128
Query: 146 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLV 205
YCH + ++HRD+KP N+++ ++ +L++ D+G + + P + + PE ++
Sbjct: 129 HYCHERKVIHRDIKPENLLMGYK-GELKIADFGWS-VHAPSLRRRXMCGTLDYLPPE-MI 185
Query: 206 DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGH--DNHDQLV----KIAKVL--GTDELNA 257
+ + +D +D+W G + + PF + H ++V K L G+ +L +
Sbjct: 186 EGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLIS 245
Query: 258 YLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSP 296
L +YH PQ L G PW + A+++ ++ P
Sbjct: 246 KLLRYH---PPQRLPLKGVMEH-PW---VKANSRRVLPP 277
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 194
R+Y +++ +Y HS +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKRVK-GRTWXLCGT 201
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 234
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 202 PEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 194
R+Y +++ +Y HS +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ-GYIKVADFGFAKRVK-GRTWXLCGT 201
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 234
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 202 PEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 194
R+Y +++ +Y HS +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ-GYIKVADFGFAKRVK-GRTWXLCGT 201
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 234
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 202 PEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 194
R+Y +++ +Y HS +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKRVK-GRTWXLCGT 201
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 234
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 202 PEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 194
R+Y +++ +Y HS +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 137 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKRVK-GRTWXLCGT 194
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 234
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 195 PEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 232
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 194
R+Y +++ +Y HS +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 145 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKRVK-GRTWXLCGT 202
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 234
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 203 PEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 194
R+Y +++ +Y HS +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 165 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKRVK-GRTWXLCGT 222
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 234
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 223 PEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 260
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 194
R+Y +++ +Y HS +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKRVK-GRTWXLCGT 201
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 234
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 202 PEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 194
R+Y +++ +Y HS +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKRVK-GRTWXLCGT 201
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 234
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 202 PEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 194
R+Y +++ +Y HS +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 137 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKRVK-GRTWXLCGT 194
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 234
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 195 PEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 232
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 194
R+Y +++ +Y HS +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 145 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKRVK-GRTWXLCGT 202
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 234
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 203 PEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 194
R+Y +++ +Y HS +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKRVK-GRTWXLCGT 201
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 234
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 202 PEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 194
R+Y +++ +Y HS +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 145 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKRVK-GRTWXLCGT 202
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 234
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 203 PEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 194
R+Y +++ +Y HS +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 145 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKRVK-GRTWXLCGT 202
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 234
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 203 PEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 194
R+Y +++ +Y HS +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKRVK-GRTWXLCGT 201
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 234
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 202 PEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 194
R+Y +++ +Y HS +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 145 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKRVK-GRTWXLCGT 202
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 234
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 203 PEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 194
R+Y +++ +Y HS +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKRVK-GRTWXLCGT 201
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 234
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 202 PEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 194
R+Y +++ +Y HS +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 139 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKRVK-GRTWXLCGT 196
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 234
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 197 PEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 234
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 194
R+Y +++ +Y HS +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKRVK-GRTWXLCGT 201
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 234
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 202 PEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 194
R+Y +++ +Y HS +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKRVK-GRTWXLCGT 201
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 234
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 202 PEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 194
R+Y +++ +Y HS +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKRVK-GRTWXLCGT 201
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 234
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 202 PEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 194
R+Y +++ +Y HS +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 165 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKRVK-GRTWXLCGT 222
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 234
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 223 PEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 260
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 94/217 (43%), Gaps = 28/217 (12%)
Query: 37 QDDYEVVRKVGRGKYSEVFEGI-------NVNTNERCXXXXXXXXXXXXXXXXXXXLQNL 89
++D + R +G G + EV+EG+ +N + ++NL
Sbjct: 7 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNL 66
Query: 90 CGGPNVVKLLDIVRDQHSKTPSLIFEYV--------NSTDFKVLYPTLTDYDIRYYIYEL 141
P++VKL+ I+ ++ + ++ Y N KVL TL Y + ++
Sbjct: 67 -DHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVL--TLVLYSL-----QI 118
Query: 142 LKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFK-- 199
KA+ Y S +HRD+ N+++ ++L D+GL+ + Y V K
Sbjct: 119 CKAMAYLESINCVHRDIAVRNILVASP-ECVKLGDFGLSRYIEDEDYYKASVTRLPIKWM 177
Query: 200 GPELLVDLQDYDYSLDMWSLG-CMFAGMIFRKEPFFY 235
PE ++ + + + D+W CM+ + F K+PFF+
Sbjct: 178 SPE-SINFRRFTTASDVWMFAVCMWEILSFGKQPFFW 213
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 94/217 (43%), Gaps = 28/217 (12%)
Query: 37 QDDYEVVRKVGRGKYSEVFEGI-------NVNTNERCXXXXXXXXXXXXXXXXXXXLQNL 89
++D + R +G G + EV+EG+ +N + ++NL
Sbjct: 23 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNL 82
Query: 90 CGGPNVVKLLDIVRDQHSKTPSLIFEYV--------NSTDFKVLYPTLTDYDIRYYIYEL 141
P++VKL+ I+ ++ + ++ Y N KVL TL Y + ++
Sbjct: 83 -DHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVL--TLVLYSL-----QI 134
Query: 142 LKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFK-- 199
KA+ Y S +HRD+ N+++ ++L D+GL+ + Y V K
Sbjct: 135 CKAMAYLESINCVHRDIAVRNILVASP-ECVKLGDFGLSRYIEDEDYYKASVTRLPIKWM 193
Query: 200 GPELLVDLQDYDYSLDMWSLG-CMFAGMIFRKEPFFY 235
PE ++ + + + D+W CM+ + F K+PFF+
Sbjct: 194 SPE-SINFRRFTTASDVWMFAVCMWEILSFGKQPFFW 229
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 94/217 (43%), Gaps = 28/217 (12%)
Query: 37 QDDYEVVRKVGRGKYSEVFEGI-------NVNTNERCXXXXXXXXXXXXXXXXXXXLQNL 89
++D + R +G G + EV+EG+ +N + ++NL
Sbjct: 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNL 70
Query: 90 CGGPNVVKLLDIVRDQHSKTPSLIFEYV--------NSTDFKVLYPTLTDYDIRYYIYEL 141
P++VKL+ I+ ++ + ++ Y N KVL TL Y + ++
Sbjct: 71 -DHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVL--TLVLYSL-----QI 122
Query: 142 LKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFK-- 199
KA+ Y S +HRD+ N+++ ++L D+GL+ + Y V K
Sbjct: 123 CKAMAYLESINCVHRDIAVRNILVASP-ECVKLGDFGLSRYIEDEDYYKASVTRLPIKWM 181
Query: 200 GPELLVDLQDYDYSLDMWSLG-CMFAGMIFRKEPFFY 235
PE ++ + + + D+W CM+ + F K+PFF+
Sbjct: 182 SPE-SINFRRFTTASDVWMFAVCMWEILSFGKQPFFW 217
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 56/100 (56%), Gaps = 4/100 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 194
R+Y +++ +Y HS +++RD+KP N++ID + +++ D+G A+ G + +
Sbjct: 165 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKRVK-GATWTLCGT 222
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 234
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 223 PEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 260
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 79/201 (39%), Gaps = 21/201 (10%)
Query: 45 KVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGG---PNVVKLLDI 101
+VGRG + EV + T +C C G P +V L
Sbjct: 81 RVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVA------CAGLSSPRIVPLYGA 134
Query: 102 VRDQHSKTPSLIFEYVNSTDFKVL---YPTLTDYDIRYYIYELLKALDYCHSQGIMHRDV 158
VR+ ++ E + L L + YY+ + L+ L+Y H++ I+H DV
Sbjct: 135 VRE--GPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDV 192
Query: 159 KPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG------PELLVDLQDYDY 212
K NV++ + + L D+G A P + Y G PE+++ + D
Sbjct: 193 KADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG-KPCDA 251
Query: 213 SLDMWSLGCMFAGMIFRKEPF 233
+D+WS CM M+ P+
Sbjct: 252 KVDIWSSCCMMLHMLNGCHPW 272
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 70/133 (52%), Gaps = 8/133 (6%)
Query: 94 NVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYP--TLTDYDIRYYIYELLKALDYCHSQ 151
+++K DQ K+ L+ EYV + P ++ + + ++ + + Y H+Q
Sbjct: 77 HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQ 136
Query: 152 GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE-YNVRV---ASRYFKGPELLVDL 207
+HR++ NV++D++ R +++ D+GLA+ G E Y VR + ++ PE L +
Sbjct: 137 HYIHRNLAARNVLLDND-RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEY 195
Query: 208 QDYDYSLDMWSLG 220
+ Y Y+ D+WS G
Sbjct: 196 KFY-YASDVWSFG 207
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 79/201 (39%), Gaps = 21/201 (10%)
Query: 45 KVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGG---PNVVKLLDI 101
+VGRG + EV + T +C C G P +V L
Sbjct: 65 RVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVA------CAGLSSPRIVPLYGA 118
Query: 102 VRDQHSKTPSLIFEYVNSTDFKVL---YPTLTDYDIRYYIYELLKALDYCHSQGIMHRDV 158
VR+ ++ E + L L + YY+ + L+ L+Y H++ I+H DV
Sbjct: 119 VRE--GPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDV 176
Query: 159 KPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG------PELLVDLQDYDY 212
K NV++ + + L D+G A P + Y G PE+++ + D
Sbjct: 177 KADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG-KPCDA 235
Query: 213 SLDMWSLGCMFAGMIFRKEPF 233
+D+WS CM M+ P+
Sbjct: 236 KVDIWSSCCMMLHMLNGCHPW 256
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 77/166 (46%), Gaps = 28/166 (16%)
Query: 94 NVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRY----------YIYELLK 143
N+V ++D+ D+ L+ EY+ PTL++Y + + ++L
Sbjct: 72 NIVSMIDV--DEEDDCYYLVMEYIEG-------PTLSEYIESHGPLSVDTAINFTNQILD 122
Query: 144 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK--EYNVRVASRYFKGP 201
+ + H I+HRD+KP N++ID + L++ D+G+A+ + N + + + P
Sbjct: 123 GIKHAHDMRIVHRDIKPQNILIDSN-KTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSP 181
Query: 202 ELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 247
E + D D++S+G + M+ + PF N + V IA
Sbjct: 182 E-QAKGEATDECTDIYSIGIVLYEMLVGEPPF-----NGETAVSIA 221
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 68/133 (51%), Gaps = 8/133 (6%)
Query: 94 NVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYP--TLTDYDIRYYIYELLKALDYCHSQ 151
++VK DQ K+ L+ EYV + P + + + ++ + + Y H+Q
Sbjct: 71 HIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHAQ 130
Query: 152 GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE-YNVRV---ASRYFKGPELLVDL 207
+HR + NV++D++ R +++ D+GLA+ G E Y VR + ++ PE L +
Sbjct: 131 HYIHRALAARNVLLDND-RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEC 189
Query: 208 QDYDYSLDMWSLG 220
+ Y Y+ D+WS G
Sbjct: 190 KFY-YASDVWSFG 201
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 68/133 (51%), Gaps = 8/133 (6%)
Query: 94 NVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYP--TLTDYDIRYYIYELLKALDYCHSQ 151
++VK DQ K+ L+ EYV + P + + + ++ + + Y H+Q
Sbjct: 72 HIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHAQ 131
Query: 152 GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE-YNVRV---ASRYFKGPELLVDL 207
+HR + NV++D++ R +++ D+GLA+ G E Y VR + ++ PE L +
Sbjct: 132 HYIHRALAARNVLLDND-RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEC 190
Query: 208 QDYDYSLDMWSLG 220
+ Y Y+ D+WS G
Sbjct: 191 KFY-YASDVWSFG 202
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 93/210 (44%), Gaps = 15/210 (7%)
Query: 33 IFSDQDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNLC-G 91
I D D YE+V+ +G G + + +NE + +
Sbjct: 14 IMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLR 73
Query: 92 GPNVVKLLDIVRDQHSKTPS---LIFEYVNSTD-FKVLYPT--LTDYDIRYYIYELLKAL 145
PN+V+ +++ TP+ ++ EY + + F+ + ++ + R++ +L+ +
Sbjct: 74 HPNIVRFKEVIL-----TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGV 128
Query: 146 DYCHSQGIMHRDVKPHNVMID-HELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELL 204
YCH+ + HRD+K N ++D +L++ +G ++ + V + + PE+L
Sbjct: 129 SYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVL 188
Query: 205 VDLQDYDYSL-DMWSLGCMFAGMIFRKEPF 233
+ ++YD + D+WS G M+ PF
Sbjct: 189 LK-KEYDGKVADVWSCGVTLYVMLVGAYPF 217
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 80/207 (38%), Gaps = 24/207 (11%)
Query: 45 KVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGG---PNVVKLLDI 101
++GRG + EV + T +C C G P +V L
Sbjct: 100 RLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEELMA------CAGLTSPRIVPLYGA 153
Query: 102 VRDQHSKTPSLIFEYVNSTDFKVLYP---TLTDYDIRYYIYELLKALDYCHSQGIMHRDV 158
VR+ ++ E + L L + YY+ + L+ L+Y HS+ I+H DV
Sbjct: 154 VRE--GPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDV 211
Query: 159 KPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG------PELLVDLQDYDY 212
K NV++ + L D+G A P + Y G PE+++ + D
Sbjct: 212 KADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLG-RSCDA 270
Query: 213 SLDMWSLGCMFAGMIFRKEP---FFYG 236
+D+WS CM M+ P FF G
Sbjct: 271 KVDVWSSCCMMLHMLNGCHPWTQFFRG 297
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 11/140 (7%)
Query: 93 PNVVKLLDIVR--DQHSKTPS-LIFEYVNSTDFK-VLYPTLTDYDIRYYIYELLKALDYC 148
P++V++ + V D+H ++ EYV K L + Y+ E+L AL Y
Sbjct: 139 PSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQKLPVAEAIAYLLEILPALSYL 198
Query: 149 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 208
HS G+++ D+KP N+M+ E +L+LID G + + + F+ PE++
Sbjct: 199 HSIGLVYNDLKPENIMLTEE--QLKLIDLGAVSRIN---SFGYLYGTPGFQAPEIV--RT 251
Query: 209 DYDYSLDMWSLGCMFAGMIF 228
+ D++++G A +
Sbjct: 252 GPTVATDIYTVGRTLAALTL 271
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 92/210 (43%), Gaps = 15/210 (7%)
Query: 33 IFSDQDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNLC-G 91
I D D YE+V+ +G G + + NE + +
Sbjct: 14 IMHDSDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLR 73
Query: 92 GPNVVKLLDIVRDQHSKTPS---LIFEYVNSTD-FKVLYPT--LTDYDIRYYIYELLKAL 145
PN+V+ +++ TP+ ++ EY + + F+ + ++ + R++ +L+ +
Sbjct: 74 HPNIVRFKEVIL-----TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGV 128
Query: 146 DYCHSQGIMHRDVKPHNVMID-HELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELL 204
Y H+ + HRD+K N ++D +L++ D+G ++ + V + + PE+L
Sbjct: 129 SYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVL 188
Query: 205 VDLQDYDYSL-DMWSLGCMFAGMIFRKEPF 233
+ ++YD + D+WS G M+ PF
Sbjct: 189 LK-KEYDGKVADVWSCGVTLYVMLVGAYPF 217
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 79/201 (39%), Gaps = 21/201 (10%)
Query: 45 KVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGG---PNVVKLLDI 101
++GRG + EV + T +C C G P +V L
Sbjct: 79 RLGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVA------CAGLSSPRIVPLYGA 132
Query: 102 VRDQHSKTPSLIFEYVNSTDFKVL---YPTLTDYDIRYYIYELLKALDYCHSQGIMHRDV 158
VR+ ++ E + L L + YY+ + L+ L+Y H++ I+H DV
Sbjct: 133 VRE--GPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDV 190
Query: 159 KPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG------PELLVDLQDYDY 212
K NV++ + + L D+G A P + Y G PE+++ + D
Sbjct: 191 KADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG-KPCDA 249
Query: 213 SLDMWSLGCMFAGMIFRKEPF 233
+D+WS CM M+ P+
Sbjct: 250 KVDIWSSCCMMLHMLNGCHPW 270
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 56/100 (56%), Gaps = 4/100 (4%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 194
R+Y +++ +Y HS +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKRVK-GRTWXLCGT 201
Query: 195 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 234
Y P +++ + Y+ ++D W+LG + M PFF
Sbjct: 202 PEYL-APAIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 93/210 (44%), Gaps = 15/210 (7%)
Query: 33 IFSDQDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNLC-G 91
I D D YE+V+ +G G + + +NE + +
Sbjct: 14 IMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLR 73
Query: 92 GPNVVKLLDIVRDQHSKTPS---LIFEYVNSTD-FKVLYPT--LTDYDIRYYIYELLKAL 145
PN+V+ +++ TP+ ++ EY + + F+ + ++ + R++ +L+ +
Sbjct: 74 HPNIVRFKEVIL-----TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGV 128
Query: 146 DYCHSQGIMHRDVKPHNVMID-HELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELL 204
YCH+ + HRD+K N ++D +L++ +G ++ + V + + PE+L
Sbjct: 129 SYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVL 188
Query: 205 VDLQDYDYSL-DMWSLGCMFAGMIFRKEPF 233
+ ++YD + D+WS G M+ PF
Sbjct: 189 LK-KEYDGKVADVWSCGVTLYVMLVGAYPF 217
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 67/137 (48%), Gaps = 7/137 (5%)
Query: 112 LIFEYVNSTDFKVLYPT---LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 168
LI +Y+N + T+++++ Y+ E++ AL++ H GI++RD+K N+++D
Sbjct: 136 LILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSN 195
Query: 169 LRKLRLIDWGLAEFY---HPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAG 225
+ L D+GL++ + + Y+ Y + +D ++D WSLG +
Sbjct: 196 -GHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYE 254
Query: 226 MIFRKEPFFYGHDNHDQ 242
++ PF + + Q
Sbjct: 255 LLTGASPFTVDGEKNSQ 271
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 80/207 (38%), Gaps = 24/207 (11%)
Query: 45 KVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGG---PNVVKLLDI 101
++GRG + EV + T +C C G P +V L
Sbjct: 81 RLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEELMA------CAGLTSPRIVPLYGA 134
Query: 102 VRDQHSKTPSLIFEYVNSTDFKVLYP---TLTDYDIRYYIYELLKALDYCHSQGIMHRDV 158
VR+ ++ E + L L + YY+ + L+ L+Y HS+ I+H DV
Sbjct: 135 VRE--GPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDV 192
Query: 159 KPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG------PELLVDLQDYDY 212
K NV++ + L D+G A P + Y G PE+++ + D
Sbjct: 193 KADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLG-RSCDA 251
Query: 213 SLDMWSLGCMFAGMIFRKEP---FFYG 236
+D+WS CM M+ P FF G
Sbjct: 252 KVDVWSSCCMMLHMLNGCHPWTQFFRG 278
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 53/89 (59%), Gaps = 4/89 (4%)
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGL-AEFYHPGKEYNVRVASRYF 198
++ K +DY HS+ +++RD+KP N+ + + +++++ D+GL + GK + RY
Sbjct: 130 QITKGVDYIHSKKLINRDLKPSNIFL-VDTKQVKIGDFGLVTSLKNDGKRXRSKGTLRYM 188
Query: 199 KGPELLVDLQDYDYSLDMWSLGCMFAGMI 227
PE + QDY +D+++LG + A ++
Sbjct: 189 -SPE-QISSQDYGKEVDLYALGLILAELL 215
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 56/108 (51%), Gaps = 20/108 (18%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 194
R+Y +++ +Y HS +++RD+KP N++ID + +++ D+G A+ RV
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAK----------RVK 192
Query: 195 SRYFK--------GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 234
R + PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 193 GRTWXLCGTPEALAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 123/279 (44%), Gaps = 28/279 (10%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTN-----ERCXXXXXXXXXXXXXXXXXXXLQNLCGG 92
DD+E+ R +G+GK+ V+ ++ + +Q
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTD-FKVLYPTLT--DYDIRYYIYELLKALDYCH 149
PN+++L + D+ + LI EY + +K L + T + + EL AL YCH
Sbjct: 83 PNILRLYNYFYDR--RRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCH 140
Query: 150 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 209
+ ++HRD+KP N+++ +L++ D+G + + P + + PE +++ +
Sbjct: 141 GKKVIHRDIKPENLLLG-LKGELKIADFGWS-VHAPSLRRKTMCGTLDYLPPE-MIEGRM 197
Query: 210 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHD--QLVKI-----AKV-LGTDELNAYLNK 261
++ +D+W +G + ++ PF N ++VK+ A V G +L + L
Sbjct: 198 HNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPASVPTGAQDLISKL-- 255
Query: 262 YHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAID 300
L +P + + S PW + A+++ ++ P A+
Sbjct: 256 --LRHNPSERLPLAQVSAHPW---VRANSRRVLPPSALQ 289
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 69/133 (51%), Gaps = 8/133 (6%)
Query: 94 NVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYP--TLTDYDIRYYIYELLKALDYCHSQ 151
+++K D + + L+ EYV + P ++ + + ++ + + Y H+Q
Sbjct: 94 HIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQ 153
Query: 152 GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE-YNVRV---ASRYFKGPELLVDL 207
+HRD+ NV++D++ R +++ D+GLA+ G E Y VR + ++ PE L +
Sbjct: 154 HYIHRDLAARNVLLDND-RLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEY 212
Query: 208 QDYDYSLDMWSLG 220
+ Y Y+ D+WS G
Sbjct: 213 KFY-YASDVWSFG 224
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 102/250 (40%), Gaps = 57/250 (22%)
Query: 93 PNVVKLLDIVRDQHSK------TPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALD 146
PNV++ +D+ + + + EYV DF L + + + L
Sbjct: 78 PNVIRYFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHL-----GLEPITLLQQTTSGLA 132
Query: 147 YCHSQGIMHRDVKPHNVMID----HELRKLRLIDWGLAEFYHPGKEYNVR----VASRYF 198
+ HS I+HRD+KPHN++I H K + D+GL + G+ R + +
Sbjct: 133 HLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGW 192
Query: 199 KGPELLVD--LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKV-LGTDEL 255
PE+L + ++ Y++D++S GC+F +I H L + A + LG L
Sbjct: 193 IAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEG-----SHPFGKSLQRQANILLGACSL 247
Query: 256 NAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLT 315
+ + H + ++ R + ++K++ D Q R +
Sbjct: 248 DCLHPEKH-------EDVIAR-----------------------ELIEKMIAMDPQKRPS 277
Query: 316 AREAMAHPYF 325
A+ + HP+F
Sbjct: 278 AKHVLKHPFF 287
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 62/118 (52%), Gaps = 15/118 (12%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWG---LAEFYHP 185
LT+ I + + + + L+ H++G HRD+KP N+++ E + + L+D G A +
Sbjct: 131 LTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPV-LMDLGSMNQACIHVE 189
Query: 186 G-------KEYNVRVASRYFKGPELLVDLQDY---DYSLDMWSLGCMFAGMIFRKEPF 233
G +++ + + ++ PEL +Q + D D+WSLGC+ M+F + P+
Sbjct: 190 GSRQALTLQDWAAQRCTISYRAPELF-SVQSHCVIDERTDVWSLGCVLYAMMFGEGPY 246
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 18/132 (13%)
Query: 112 LIFEYVNSTDFKVLYPTLTDY---DIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 168
+ EYVN D + + +Y E+ L + H +GI++RD+K NVM+D E
Sbjct: 97 FVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLDSE 156
Query: 169 LRKLRLIDWGLAEFYHPGKEYNV-RVASRYFKG------PELLVDLQDYDYSLDMWSLGC 221
+++ D+G+ KE+ + V +R F G PE++ Q Y S+D W+ G
Sbjct: 157 -GHIKIADFGMC------KEHMMDGVTTREFCGTPDYIAPEIIA-YQPYGKSVDWWAYGV 208
Query: 222 MFAGMIFRKEPF 233
+ M+ + PF
Sbjct: 209 LLYEMLAGQPPF 220
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 80/197 (40%), Gaps = 39/197 (19%)
Query: 142 LKALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 200
+KAL++ I+HRD+KP N+++D ++L D+G++ R +
Sbjct: 135 VKALNHLKENLKIIHRDIKPSNILLDRS-GNIKLCDFGISGQLVDSIAKTRDAGCRPYMA 193
Query: 201 PELL---VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNA 257
PE + Q YD D+WSLG + + P+ + DQL ++ K G
Sbjct: 194 PERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVK--GD----- 246
Query: 258 YLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAR 317
PQL N++ + SP I+F++ L D R +
Sbjct: 247 ---------PPQLS---------------NSEEREF-SPSFINFVNLCLTKDESKRPKYK 281
Query: 318 EAMAHPYFA--QVRAAE 332
E + HP+ + RA E
Sbjct: 282 ELLKHPFILMYEERAVE 298
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 96/233 (41%), Gaps = 30/233 (12%)
Query: 36 DQDDYEV-------VRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQN 88
D+D +E+ V+++G G++ EV+ G N+ + L
Sbjct: 4 DKDAWEIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMK 63
Query: 89 LCGGPNVVKLLDIVRDQHSKTPSLIFEYVNST---DF-------KVLYPTLTDYDIRYYI 138
+V+L +V + +I EY+ DF KVL P L D+
Sbjct: 64 TLQHDKLVRLYAVVTREEPI--YIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSA---- 117
Query: 139 YELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY- 197
++ + + Y + +HRD++ NV++ L ++ D+GLA EY R +++
Sbjct: 118 -QIAEGMAYIERKNYIHRDLRAANVLVSESLM-CKIADFGLARVIE-DNEYTAREGAKFP 174
Query: 198 --FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
+ PE ++ + D+WS G + ++ + + G N D + +++
Sbjct: 175 IKWTAPE-AINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQ 226
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 6/126 (4%)
Query: 112 LIFEYVNSTDFKVLYPTLTDYD---IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 168
+ EYVN D + + +Y E+ L + S+GI++RD+K NVM+D E
Sbjct: 419 FVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSE 478
Query: 169 LRKLRLIDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMI 227
+++ D+G+ E G + + PE++ Q Y S+D W+ G + M+
Sbjct: 479 GH-IKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIA-YQPYGKSVDWWAFGVLLYEML 536
Query: 228 FRKEPF 233
+ PF
Sbjct: 537 AGQAPF 542
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 6/126 (4%)
Query: 112 LIFEYVNSTDFKVLYPTLTDYD---IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 168
+ EYVN D + + +Y E+ L + S+GI++RD+K NVM+D E
Sbjct: 98 FVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSE 157
Query: 169 LRKLRLIDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMI 227
+++ D+G+ E G + + PE++ Q Y S+D W+ G + M+
Sbjct: 158 -GHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIA-YQPYGKSVDWWAFGVLLYEML 215
Query: 228 FRKEPF 233
+ PF
Sbjct: 216 AGQAPF 221
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 6/111 (5%)
Query: 141 LLKALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 199
++KAL Y + G++HRDVKP N+++D E +++L D+G++ K + +
Sbjct: 133 IVKALYYLKEKHGVIHRDVKPSNILLD-ERGQIKLCDFGISGRLVDDKAKDRSAGCAAYM 191
Query: 200 GPELL----VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKI 246
PE + DYD D+WSLG + + P+ + + L K+
Sbjct: 192 APERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKV 242
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 96/228 (42%), Gaps = 28/228 (12%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELR--------KLRLIDWGLA 180
+ + I Y + +LKALDY H G +HR VK +++I + + L +I G
Sbjct: 125 MNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQR 184
Query: 181 E-FYHPGKEYNVRVASRYFKGPELL-VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHD 238
+ H +Y+V+V + PE+L +LQ YD D++S+G + PF D
Sbjct: 185 QRVVHDFPKYSVKVLP--WLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPF---KD 239
Query: 239 NHDQLVKIAKVLGTDEL---NAYLNKYHLELDPQ--------LDALVGRHSRKPWSKFIN 287
+ + K+ GT + + L + P D+L R +
Sbjct: 240 MPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPS 299
Query: 288 ADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQV--RAAES 333
SP F+++ L+ + R +A + H +F Q+ RA+E+
Sbjct: 300 HPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKRRASEA 347
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 96/228 (42%), Gaps = 28/228 (12%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELR--------KLRLIDWGLA 180
+ + I Y + +LKALDY H G +HR VK +++I + + L +I G
Sbjct: 109 MNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQR 168
Query: 181 E-FYHPGKEYNVRVASRYFKGPELL-VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHD 238
+ H +Y+V+V + PE+L +LQ YD D++S+G + PF D
Sbjct: 169 QRVVHDFPKYSVKVLP--WLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPF---KD 223
Query: 239 NHDQLVKIAKVLGTDEL---NAYLNKYHLELDPQ--------LDALVGRHSRKPWSKFIN 287
+ + K+ GT + + L + P D+L R +
Sbjct: 224 MPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPS 283
Query: 288 ADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQV--RAAES 333
SP F+++ L+ + R +A + H +F Q+ RA+E+
Sbjct: 284 HPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKRRASEA 331
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 76/145 (52%), Gaps = 13/145 (8%)
Query: 125 LYPTLTDYDIRYYI---YELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE 181
L+ + T ++++ I + + +DY H++ I+HRD+K +N+ + HE +++ D+GLA
Sbjct: 98 LHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFL-HEDNTVKIGDFGLAT 156
Query: 182 F---YHPGKEYNVRVASRYFKGPEL--LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYG 236
+ ++ S + PE+ + D Y + D+++ G + ++ + P +
Sbjct: 157 VKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP-YSN 215
Query: 237 HDNHDQLVKIAKVLGTDELNAYLNK 261
+N DQ++++ +G L+ L+K
Sbjct: 216 INNRDQIIEM---VGRGSLSPDLSK 237
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 65/136 (47%), Gaps = 12/136 (8%)
Query: 94 NVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTD-----YDIRYYIYELLKALDYC 148
N+VK I + LI E++ S K P + ++Y + ++ K +DY
Sbjct: 72 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAV-QICKGMDYL 130
Query: 149 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV----RVASRYFKGPELL 204
S+ +HRD+ NV+++ E ++++ D+GL + KE R + ++ PE L
Sbjct: 131 GSRQYVHRDLAARNVLVESE-HQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECL 189
Query: 205 VDLQDYDYSLDMWSLG 220
+ + Y S D+WS G
Sbjct: 190 MQSKFYIAS-DVWSFG 204
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 65/136 (47%), Gaps = 12/136 (8%)
Query: 94 NVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTD-----YDIRYYIYELLKALDYC 148
N+VK I + LI E++ S K P + ++Y + ++ K +DY
Sbjct: 84 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAV-QICKGMDYL 142
Query: 149 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV----RVASRYFKGPELL 204
S+ +HRD+ NV+++ E ++++ D+GL + KE R + ++ PE L
Sbjct: 143 GSRQYVHRDLAARNVLVESE-HQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECL 201
Query: 205 VDLQDYDYSLDMWSLG 220
+ + Y S D+WS G
Sbjct: 202 MQSKFYIAS-DVWSFG 216
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 128 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 187
+L + + Y+ + L AL + HSQG++H DVKP N+ + R +L D+GL
Sbjct: 153 SLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGR-CKLGDFGLLVELGTAG 211
Query: 188 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLG 220
V+ + PELL Y + D++SLG
Sbjct: 212 AGEVQEGDPRYMAPELLQG--SYGTAADVFSLG 242
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 76/145 (52%), Gaps = 13/145 (8%)
Query: 125 LYPTLTDYDIRYYI---YELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA- 180
L+ + T ++++ I + + +DY H++ I+HRD+K +N+ + HE +++ D+GLA
Sbjct: 110 LHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFL-HEDNTVKIGDFGLAT 168
Query: 181 --EFYHPGKEYNVRVASRYFKGPEL--LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYG 236
+ ++ S + PE+ + D Y + D+++ G + ++ + P +
Sbjct: 169 EKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP-YSN 227
Query: 237 HDNHDQLVKIAKVLGTDELNAYLNK 261
+N DQ++++ +G L+ L+K
Sbjct: 228 INNRDQIIEM---VGRGSLSPDLSK 249
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 76/145 (52%), Gaps = 13/145 (8%)
Query: 125 LYPTLTDYDIRYYI---YELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA- 180
L+ + T ++++ I + + +DY H++ I+HRD+K +N+ + HE +++ D+GLA
Sbjct: 110 LHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFL-HEDNTVKIGDFGLAT 168
Query: 181 --EFYHPGKEYNVRVASRYFKGPEL--LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYG 236
+ ++ S + PE+ + D Y + D+++ G + ++ + P +
Sbjct: 169 EKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP-YSN 227
Query: 237 HDNHDQLVKIAKVLGTDELNAYLNK 261
+N DQ++++ +G L+ L+K
Sbjct: 228 INNRDQIIEM---VGRGSLSPDLSK 249
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 135 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWG-LAEFYHPGKEYN-VR 192
R+Y+ E++ A+D H G +HRD+KP N+++D +RL D+G + G + V
Sbjct: 165 RFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDR-CGHIRLADFGSCLKLRADGTVRSLVA 223
Query: 193 VASRYFKGPELLVDLQDYDY------SLDMWSLGCMFAGMIFRKEPFF 234
V + + PE+L + D W+LG M + + PF+
Sbjct: 224 VGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFY 271
Score = 27.7 bits (60), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 9/18 (50%), Positives = 16/18 (88%)
Query: 37 QDDYEVVRKVGRGKYSEV 54
+DD+E+++ +GRG +SEV
Sbjct: 60 RDDFEILKVIGRGAFSEV 77
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 144 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY-NVRVASRYFKGPE 202
AL + H + I+HRD+K N+ + + ++L D+G+A + E + + Y+ PE
Sbjct: 137 ALKHVHDRKILHRDIKSQNIFLTKD-GTVQLGDFGIARVLNSTVELARACIGTPYYLSPE 195
Query: 203 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYG 236
+ + + Y+ D+W+LGC+ + K F G
Sbjct: 196 ICEN-KPYNNKSDIWALGCVLYELCTLKHAFEAG 228
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/223 (18%), Positives = 93/223 (41%), Gaps = 19/223 (8%)
Query: 37 QDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGGPNVV 96
++ ++V+K+G G++ EV+ G N+ + L +V
Sbjct: 11 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLV 70
Query: 97 KLLDIVRDQHS-------KTPSLIFEYVNSTDF-KVLYPTLTDYDIRYYIYELLKALDYC 148
+L +V + + +++ S + KVL P L D+ ++ + + Y
Sbjct: 71 RLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSA-----QIAEGMAYI 125
Query: 149 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY---FKGPELLV 205
+ +HRD++ NV++ L ++ D+GLA EY R +++ + PE +
Sbjct: 126 ERKNYIHRDLRAANVLVSESLM-CKIADFGLARVIE-DNEYTAREGAKFPIKWTAPE-AI 182
Query: 206 DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
+ + ++WS G + ++ + + G N D + +++
Sbjct: 183 NFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQ 225
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 70/153 (45%), Gaps = 20/153 (13%)
Query: 93 PNVVKLLDI-VRDQHSKTPSLIFEYVNSTDFKVLY------PTLTDYDIRYYIYELLKAL 145
PNV+ LL I +R + S P ++ Y+ D + PT+ D + + ++ K +
Sbjct: 83 PNVLSLLGICLRSEGS--PLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGM 138
Query: 146 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA------EFYHPGKEYNVRVASRYFK 199
Y S+ +HRD+ N M+D + +++ D+GLA E+Y + ++ ++
Sbjct: 139 KYLASKKFVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 197
Query: 200 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEP 232
L Q + D+WS G + ++ R P
Sbjct: 198 LESL--QTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 70/153 (45%), Gaps = 20/153 (13%)
Query: 93 PNVVKLLDI-VRDQHSKTPSLIFEYVNSTDFKVLY------PTLTDYDIRYYIYELLKAL 145
PNV+ LL I +R + S P ++ Y+ D + PT+ D + + ++ K +
Sbjct: 109 PNVLSLLGICLRSEGS--PLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGM 164
Query: 146 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA------EFYHPGKEYNVRVASRYFK 199
Y S+ +HRD+ N M+D + +++ D+GLA E+Y + ++ ++
Sbjct: 165 KYLASKKFVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 223
Query: 200 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEP 232
L Q + D+WS G + ++ R P
Sbjct: 224 LESL--QTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 70/153 (45%), Gaps = 20/153 (13%)
Query: 93 PNVVKLLDI-VRDQHSKTPSLIFEYVNSTDFKVLY------PTLTDYDIRYYIYELLKAL 145
PNV+ LL I +R + S P ++ Y+ D + PT+ D + + ++ K +
Sbjct: 91 PNVLSLLGICLRSEGS--PLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGM 146
Query: 146 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA------EFYHPGKEYNVRVASRYFK 199
Y S+ +HRD+ N M+D + +++ D+GLA E+Y + ++ ++
Sbjct: 147 KYLASKKFVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 200 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEP 232
L Q + D+WS G + ++ R P
Sbjct: 206 LESL--QTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 70/153 (45%), Gaps = 20/153 (13%)
Query: 93 PNVVKLLDI-VRDQHSKTPSLIFEYVNSTDFKVLY------PTLTDYDIRYYIYELLKAL 145
PNV+ LL I +R + S P ++ Y+ D + PT+ D + + ++ K +
Sbjct: 91 PNVLSLLGICLRSEGS--PLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGM 146
Query: 146 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA------EFYHPGKEYNVRVASRYFK 199
Y S+ +HRD+ N M+D + +++ D+GLA E+Y + ++ ++
Sbjct: 147 KYLASKKFVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 200 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEP 232
L Q + D+WS G + ++ R P
Sbjct: 206 LESL--QTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 70/153 (45%), Gaps = 20/153 (13%)
Query: 93 PNVVKLLDI-VRDQHSKTPSLIFEYVNSTDFKVLY------PTLTDYDIRYYIYELLKAL 145
PNV+ LL I +R + S P ++ Y+ D + PT+ D + + ++ K +
Sbjct: 89 PNVLSLLGICLRSEGS--PLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGM 144
Query: 146 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA------EFYHPGKEYNVRVASRYFK 199
Y S+ +HRD+ N M+D + +++ D+GLA E+Y + ++ ++
Sbjct: 145 KYLASKKFVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 203
Query: 200 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEP 232
L Q + D+WS G + ++ R P
Sbjct: 204 LESL--QTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 70/153 (45%), Gaps = 20/153 (13%)
Query: 93 PNVVKLLDI-VRDQHSKTPSLIFEYVNSTDFKVLY------PTLTDYDIRYYIYELLKAL 145
PNV+ LL I +R + S P ++ Y+ D + PT+ D + + ++ K +
Sbjct: 88 PNVLSLLGICLRSEGS--PLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGM 143
Query: 146 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA------EFYHPGKEYNVRVASRYFK 199
Y S+ +HRD+ N M+D + +++ D+GLA E+Y + ++ ++
Sbjct: 144 KYLASKKFVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 202
Query: 200 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEP 232
L Q + D+WS G + ++ R P
Sbjct: 203 LESL--QTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 70/153 (45%), Gaps = 20/153 (13%)
Query: 93 PNVVKLLDI-VRDQHSKTPSLIFEYVNSTDFKVLY------PTLTDYDIRYYIYELLKAL 145
PNV+ LL I +R + S P ++ Y+ D + PT+ D + + ++ K +
Sbjct: 110 PNVLSLLGICLRSEGS--PLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGM 165
Query: 146 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA------EFYHPGKEYNVRVASRYFK 199
Y S+ +HRD+ N M+D + +++ D+GLA E+Y + ++ ++
Sbjct: 166 KYLASKKFVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 224
Query: 200 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEP 232
L Q + D+WS G + ++ R P
Sbjct: 225 LESL--QTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 71/134 (52%), Gaps = 18/134 (13%)
Query: 125 LYPTLTDYDIRYYIYELL-------KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDW 177
LY L + ++ +++L+ + +DY H++ I+HRD+K +N+ + HE +++ D+
Sbjct: 118 LYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFL-HEGLTVKIGDF 176
Query: 178 GLAEF---YHPGKEYNVRVASRYFKGPELLVDLQD---YDYSLDMWSLGCMFAGMIFRKE 231
GLA + ++ S + PE ++ +QD + + D++S G + ++ +
Sbjct: 177 GLATVKSRWSGSQQVEQPTGSVLWMAPE-VIRMQDNNPFSFQSDVYSYGIVLYELMTGEL 235
Query: 232 PFFYGH-DNHDQLV 244
P Y H +N DQ++
Sbjct: 236 P--YSHINNRDQII 247
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 70/153 (45%), Gaps = 20/153 (13%)
Query: 93 PNVVKLLDI-VRDQHSKTPSLIFEYVNSTDFKVLY------PTLTDYDIRYYIYELLKAL 145
PNV+ LL I +R + S P ++ Y+ D + PT+ D + + ++ K +
Sbjct: 90 PNVLSLLGICLRSEGS--PLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGM 145
Query: 146 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA------EFYHPGKEYNVRVASRYFK 199
Y S+ +HRD+ N M+D + +++ D+GLA E+Y + ++ ++
Sbjct: 146 KYLASKKFVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 204
Query: 200 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEP 232
L Q + D+WS G + ++ R P
Sbjct: 205 LESL--QTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 88/209 (42%), Gaps = 30/209 (14%)
Query: 141 LLKALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 199
++K L Y + IMHRDVKP N++++ +++L D+G++ N V +R +
Sbjct: 140 VIKGLTYLREKHKIMHRDVKPSNILVNSR-GEIKLCDFGVSGQLI-DSMANSFVGTRSYM 197
Query: 200 GPELLVDLQDYDYSL--DMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG------ 251
PE LQ YS+ D+WS+G M + P +L+ +V G
Sbjct: 198 SPE---RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETP 254
Query: 252 --TDELNAYLNKYHLELDPQ------LDALVGRHSRKPWSKFINADNQHLVSPEAIDFLD 303
LNK+ ++ P LD +V K S + + Q DF++
Sbjct: 255 PRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQ--------DFVN 306
Query: 304 KLLRYDHQDRLTAREAMAHPYFAQVRAAE 332
K L + +R ++ M H + + A E
Sbjct: 307 KCLIKNPAERADLKQLMVHAFIKRSDAEE 335
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 71/165 (43%), Gaps = 32/165 (19%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXX----LQNLCGGP 93
+ + + RK+G G + E++ G N+ TNE LQ G P
Sbjct: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIP 66
Query: 94 NV----------VKLLDIVRDQHSKTPSL--IFEYVNSTDFKVLYPTLTDYDIRYYIYEL 141
NV V ++D++ PSL +F + + L+ + ++
Sbjct: 67 NVRWFGVEGDYNVLVMDLL------GPSLEDLFNFCSRK--------LSLKTVLMLADQM 112
Query: 142 LKALDYCHSQGIMHRDVKPHNVMIDHELR--KLRLIDWGLAEFYH 184
+ +++ HS+ +HRD+KP N ++ R ++ +ID+GLA+ Y
Sbjct: 113 INRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYR 157
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 70/153 (45%), Gaps = 20/153 (13%)
Query: 93 PNVVKLLDI-VRDQHSKTPSLIFEYVNSTDFKVLY------PTLTDYDIRYYIYELLKAL 145
PNV+ LL I +R + S P ++ Y+ D + PT+ D + + ++ K +
Sbjct: 86 PNVLSLLGICLRSEGS--PLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGM 141
Query: 146 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA------EFYHPGKEYNVRVASRYFK 199
Y S+ +HRD+ N M+D + +++ D+GLA E+Y + ++ ++
Sbjct: 142 KYLASKKFVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 200
Query: 200 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEP 232
L Q + D+WS G + ++ R P
Sbjct: 201 LESL--QTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 89/215 (41%), Gaps = 53/215 (24%)
Query: 131 DYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELR----------KLRLI--DWG 178
+Y+ + ++ + + HS I+HRD+KP N+++ R LR++ D+G
Sbjct: 132 EYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 191
Query: 179 LAEFYHPGK-----EYNVRVASRYFKGPELLVD--LQDYDYSLDMWSLGCMFAGMIFR-K 230
L + G+ N + ++ PELL + + S+D++S+GC+F ++ + K
Sbjct: 192 LCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGK 251
Query: 231 EPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADN 290
PF + +++ + DE+ H R
Sbjct: 252 HPFGDKYSRESNIIR--GIFSLDEMKCL------------------HDRS---------- 281
Query: 291 QHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 325
+ EA D + +++ +D R TA + + HP F
Sbjct: 282 ---LIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 313
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 89/215 (41%), Gaps = 53/215 (24%)
Query: 131 DYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELR----------KLRLI--DWG 178
+Y+ + ++ + + HS I+HRD+KP N+++ R LR++ D+G
Sbjct: 132 EYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 191
Query: 179 LAEFYHPGK-----EYNVRVASRYFKGPELLVD--LQDYDYSLDMWSLGCMFAGMIFR-K 230
L + G+ N + ++ PELL + + S+D++S+GC+F ++ + K
Sbjct: 192 LCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGK 251
Query: 231 EPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADN 290
PF + +++ + DE+ H R
Sbjct: 252 HPFGDKYSRESNIIR--GIFSLDEMKCL------------------HDRS---------- 281
Query: 291 QHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 325
+ EA D + +++ +D R TA + + HP F
Sbjct: 282 ---LIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 313
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 89/219 (40%), Gaps = 57/219 (26%)
Query: 131 DYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELR----------KLRLI--DWG 178
+Y+ + ++ + + HS I+HRD+KP N+++ R LR++ D+G
Sbjct: 114 EYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 173
Query: 179 LAEFYHPGKE-----YNVRVASRYFKGPELLVDLQDYDY------SLDMWSLGCMFAGMI 227
L + G+ N + ++ PELL + + S+D++S+GC+F ++
Sbjct: 174 LCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYIL 233
Query: 228 FR-KEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFI 286
+ K PF + +++ + DE+ H R
Sbjct: 234 SKGKHPFGDKYSRESNIIR--GIFSLDEMKCL------------------HDRS------ 267
Query: 287 NADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 325
+ EA D + +++ +D R TA + + HP F
Sbjct: 268 -------LIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 299
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 89/219 (40%), Gaps = 57/219 (26%)
Query: 131 DYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELR----------KLRLI--DWG 178
+Y+ + ++ + + HS I+HRD+KP N+++ R LR++ D+G
Sbjct: 114 EYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 173
Query: 179 LAEFYHPGK-----EYNVRVASRYFKGPELLVDLQDYDY------SLDMWSLGCMFAGMI 227
L + G+ N + ++ PELL + + S+D++S+GC+F ++
Sbjct: 174 LCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYIL 233
Query: 228 FR-KEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFI 286
+ K PF + +++ + DE+ H R
Sbjct: 234 SKGKHPFGDKYSRESNIIR--GIFSLDEMKCL------------------HDRS------ 267
Query: 287 NADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 325
+ EA D + +++ +D R TA + + HP F
Sbjct: 268 -------LIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 299
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA------EF 182
+T D+ Y+L + ++Y SQ +HRD+ NV++ E +R+ D+GLA ++
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV-TENNVMRIADFGLARDINNIDY 212
Query: 183 YHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMF 223
Y K N R+ ++ PE L D + Y + D+WS G +
Sbjct: 213 YK--KTTNGRLPVKWM-APEALFD-RVYTHQSDVWSFGVLM 249
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 74/160 (46%), Gaps = 31/160 (19%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRY-------YIYELLKAL 145
PNV+K + ++ K + I EY+ + + ++ D +Y + ++ +
Sbjct: 67 PNVLKFIGVL--YKDKRLNFITEYIKGGTLRGIIKSM---DSQYPWSQRVSFAKDIASGM 121
Query: 146 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA-----EFYHP-----------GKEY 189
Y HS I+HRD+ HN ++ E + + + D+GLA E P K Y
Sbjct: 122 AYLHSMNIIHRDLNSHNCLV-RENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRY 180
Query: 190 NVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFR 229
V V + Y+ PE +++ + YD +D++S G + +I R
Sbjct: 181 TV-VGNPYWMAPE-MINGRSYDEKVDVFSFGIVLCEIIGR 218
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 60/123 (48%), Gaps = 10/123 (8%)
Query: 105 QHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVM 164
Q + P L F + S + + L+ D+ Y++ + ++Y S+ +HRD+ NV+
Sbjct: 126 QARRPPGLEFSFNPSHNPE---EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 182
Query: 165 IDHELRKLRLIDWGLAEFYH----PGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLG 220
+ + +++ D+GLA H K N R+ ++ PE L D + Y + D+WS G
Sbjct: 183 VTED-NVMKIADFGLARDIHHIDXXKKTTNGRLPVKWM-APEALFD-RIYTHQSDVWSFG 239
Query: 221 CMF 223
+
Sbjct: 240 VLL 242
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 99/250 (39%), Gaps = 62/250 (24%)
Query: 134 IRYYIYELLKALDYCHSQ-GIMHRDVKPHNVMI---DHELRKL----------------- 172
++ I ++L+ LDY HS+ I+H D+KP N+++ D +R++
Sbjct: 142 VKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAYVRRMAAEATEWQKAGAPPPSG 201
Query: 173 --------------------------RLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 206
++ D G A + H K + + +R ++ E+L+
Sbjct: 202 SAVSTAPAADLLVNPLDPRNADKIRVKIADLGNACWVH--KHFTEDIQTRQYRSIEVLIG 259
Query: 207 LQDYDYSLDMWSLGCM---FAGMIFRKEPFFYGHD---NHDQLVKIAKVLGTDELN-AYL 259
Y D+WS CM A + EP G D + D + I ++LG+ + A
Sbjct: 260 -AGYSTPADIWSTACMAFELATGDYLFEPH-SGEDYSRDEDHIAHIIELLGSIPRHFALS 317
Query: 260 NKYHLELDPQLDALVGRHSRKPWSKFINADNQ----HLVSPEAIDFLDKLLRYDHQDRLT 315
KY E + L KPWS F + H + + DFL +L + R +
Sbjct: 318 GKYSREFFNRRGELRHITKLKPWSLFDVLVEKYGWPHEDAAQFTDFLIPMLEMVPEKRAS 377
Query: 316 AREAMAHPYF 325
A E + HP+
Sbjct: 378 AGECLRHPWL 387
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 89/205 (43%), Gaps = 22/205 (10%)
Query: 141 LLKALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 199
++K L Y + IMHRDVKP N++++ +++L D+G++ N V +R +
Sbjct: 175 VIKGLTYLREKHKIMHRDVKPSNILVNSR-GEIKLCDFGVSGQLI-DSMANSFVGTRSYM 232
Query: 200 GPELLVDLQDYDYSL--DMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG------ 251
PE LQ YS+ D+WS+G M + P +L+ +V G
Sbjct: 233 SPE---RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETP 289
Query: 252 --TDELNAYLNKYHLELDPQLD--ALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLR 307
L+ Y ++ P + L+ +P K +A + S E DF++K L
Sbjct: 290 PRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSA----VFSLEFQDFVNKCLI 345
Query: 308 YDHQDRLTAREAMAHPYFAQVRAAE 332
+ +R ++ M H + + A E
Sbjct: 346 KNPAERADLKQLMVHAFIKRSDAEE 370
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA------EF 182
+T D+ Y+L + ++Y SQ +HRD+ NV++ E +++ D+GLA ++
Sbjct: 200 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV-TENNVMKIADFGLARDINNIDY 258
Query: 183 YHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMF 223
Y K N R+ ++ PE L D + Y + D+WS G +
Sbjct: 259 YK--KTTNGRLPVKWM-APEALFD-RVYTHQSDVWSFGVLM 295
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 97/233 (41%), Gaps = 28/233 (12%)
Query: 35 SDQDDYEVVRK-------VGRGKYSEVFEGINVNT-NERCXXXXXXXXXXXXXXXXXXXL 86
S DYE+ R+ +G G++ +V +GI ++ N L
Sbjct: 28 SSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFL 87
Query: 87 QNLCGG-----PNVVKLLDIVRDQHSKTPS-LIFEYVNSTDFKVLYP----TLTDYDIRY 136
Q P++VKL+ ++ ++ P +I E + + +L +
Sbjct: 88 QEALTMRQFDHPHIVKLIGVI----TENPVWIIMELCTLGELRSFLQVRKYSLDLASLIL 143
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 196
Y Y+L AL Y S+ +HRD+ NV++ ++L D+GL+ + Y
Sbjct: 144 YAYQLSTALAYLESKRFVHRDIAARNVLVSSN-DCVKLGDFGLSRYMEDSTYYKASKGKL 202
Query: 197 YFK--GPELLVDLQDYDYSLDMWSLG-CMFAGMIFRKEPFFYGHDNHDQLVKI 246
K PE ++ + + + D+W G CM+ ++ +P F G N+D + +I
Sbjct: 203 PIKWMAPE-SINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 253
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 97/233 (41%), Gaps = 28/233 (12%)
Query: 35 SDQDDYEVVRK-------VGRGKYSEVFEGINVNT-NERCXXXXXXXXXXXXXXXXXXXL 86
S DYE+ R+ +G G++ +V +GI ++ N L
Sbjct: 5 SSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFL 64
Query: 87 QNLCGG-----PNVVKLLDIVRDQHSKTPS-LIFEYVNSTDFKVLYP----TLTDYDIRY 136
Q P++VKL+ ++ ++ P +I E + + +L +
Sbjct: 65 QEALTMRQFDHPHIVKLIGVI----TENPVWIIMELCTLGELRSFLQVRKYSLDLASLIL 120
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 196
Y Y+L AL Y S+ +HRD+ NV++ ++L D+GL+ + Y
Sbjct: 121 YAYQLSTALAYLESKRFVHRDIAARNVLVSSN-DCVKLGDFGLSRYMEDSTYYKASKGKL 179
Query: 197 YFK--GPELLVDLQDYDYSLDMWSLG-CMFAGMIFRKEPFFYGHDNHDQLVKI 246
K PE ++ + + + D+W G CM+ ++ +P F G N+D + +I
Sbjct: 180 PIKWMAPE-SINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 230
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 87/205 (42%), Gaps = 22/205 (10%)
Query: 141 LLKALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 199
++K L Y + IMHRDVKP N++++ +++L D+G++ N V +R +
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVNSR-GEIKLCDFGVSGQLI-DSMANSFVGTRSYM 170
Query: 200 GPELLVDLQDYDYSL--DMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNA 257
PE LQ YS+ D+WS+G M + P +L+ +V G +A
Sbjct: 171 SPE---RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEG----DA 223
Query: 258 YLNKYHLELDPQLDALVGRHSRKPWSKF------INADNQHLVSP----EAIDFLDKLLR 307
+ + G SR P + F +N L S E DF++K L
Sbjct: 224 AETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLI 283
Query: 308 YDHQDRLTAREAMAHPYFAQVRAAE 332
+ +R ++ M H + + A E
Sbjct: 284 KNPAERADLKQLMVHAFIKRSDAEE 308
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 87/205 (42%), Gaps = 22/205 (10%)
Query: 141 LLKALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 199
++K L Y + IMHRDVKP N++++ +++L D+G++ N V +R +
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVNSR-GEIKLCDFGVSGQLI-DSMANSFVGTRSYM 170
Query: 200 GPELLVDLQDYDYSL--DMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNA 257
PE LQ YS+ D+WS+G M + P +L+ +V G +A
Sbjct: 171 SPE---RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEG----DA 223
Query: 258 YLNKYHLELDPQLDALVGRHSRKPWSKF------INADNQHLVSP----EAIDFLDKLLR 307
+ + G SR P + F +N L S E DF++K L
Sbjct: 224 AETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLI 283
Query: 308 YDHQDRLTAREAMAHPYFAQVRAAE 332
+ +R ++ M H + + A E
Sbjct: 284 KNPAERADLKQLMVHAFIKRSDAEE 308
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 87/205 (42%), Gaps = 22/205 (10%)
Query: 141 LLKALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 199
++K L Y + IMHRDVKP N++++ +++L D+G++ N V +R +
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVNSR-GEIKLCDFGVSGQLI-DSMANSFVGTRSYM 170
Query: 200 GPELLVDLQDYDYSL--DMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNA 257
PE LQ YS+ D+WS+G M + P +L+ +V G +A
Sbjct: 171 SPE---RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEG----DA 223
Query: 258 YLNKYHLELDPQLDALVGRHSRKPWSKF------INADNQHLVSP----EAIDFLDKLLR 307
+ + G SR P + F +N L S E DF++K L
Sbjct: 224 AETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLI 283
Query: 308 YDHQDRLTAREAMAHPYFAQVRAAE 332
+ +R ++ M H + + A E
Sbjct: 284 KNPAERADLKQLMVHAFIKRSDAEE 308
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 95/252 (37%), Gaps = 64/252 (25%)
Query: 134 IRYYIYELLKALDYCHSQG-IMHRDVKPHNVMI--------------------------- 165
++ I ++L+ LDY H++ I+H D+KP N+++
Sbjct: 132 VKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSG 191
Query: 166 ---------------------DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELL 204
+ E K+++ D G A + H K + + +R ++ E+L
Sbjct: 192 SAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVH--KHFTEDIQTRQYRSLEVL 249
Query: 205 VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHD------NHDQLVKIAKVLGTDELNAY 258
+ Y+ D+WS CM A + + F H + D + I ++LG
Sbjct: 250 IG-SGYNTPADIWSTACM-AFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLI 307
Query: 259 L-NKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEA----IDFLDKLLRYDHQDR 313
+ KY E + L KPW F ++ S E DFL +L + R
Sbjct: 308 VAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKR 367
Query: 314 LTAREAMAHPYF 325
TA E + HP+
Sbjct: 368 ATAAECLRHPWL 379
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Query: 141 LLKALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 199
++K L Y + IMHRDVKP N++++ +++L D+G++ N V +R +
Sbjct: 132 VIKGLTYLREKHKIMHRDVKPSNILVNSR-GEIKLCDFGVSGQLIDSMA-NSFVGTRSYM 189
Query: 200 GPELLVDLQDYDYSL--DMWSLGCMFAGMIFRKEPFFYGHDN 239
PE LQ YS+ D+WS+G M + P G +
Sbjct: 190 SPE---RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGS 228
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 87/205 (42%), Gaps = 22/205 (10%)
Query: 141 LLKALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 199
++K L Y + IMHRDVKP N++++ +++L D+G++ N V +R +
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVNSR-GEIKLCDFGVSGQLI-DSMANSFVGTRSYM 170
Query: 200 GPELLVDLQDYDYSL--DMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNA 257
PE LQ YS+ D+WS+G M + P +L+ +V G +A
Sbjct: 171 SPE---RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEG----DA 223
Query: 258 YLNKYHLELDPQLDALVGRHSRKPWSKF------INADNQHLVSP----EAIDFLDKLLR 307
+ + G SR P + F +N L S E DF++K L
Sbjct: 224 AETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLI 283
Query: 308 YDHQDRLTAREAMAHPYFAQVRAAE 332
+ +R ++ M H + + A E
Sbjct: 284 KNPAERADLKQLMVHAFIKRSDAEE 308
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA------EF 182
+T D+ Y+L + ++Y SQ +HRD+ NV++ E +++ D+GLA ++
Sbjct: 141 MTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLV-TENNVMKIADFGLARDINNIDY 199
Query: 183 YHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMF 223
Y K N R+ ++ PE L D + Y + D+WS G +
Sbjct: 200 YK--KTTNGRLPVKWM-APEALFD-RVYTHQSDVWSFGVLM 236
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 60/123 (48%), Gaps = 10/123 (8%)
Query: 105 QHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVM 164
Q + P L + Y S + + L+ D+ Y++ + ++Y S+ +HRD+ NV+
Sbjct: 119 QARRPPGLEYSYNPSHNPE---EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 175
Query: 165 IDHELRKLRLIDWGLAEFYHP----GKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLG 220
+ + +++ D+GLA H K N R+ ++ PE L D + Y + D+WS G
Sbjct: 176 VTED-NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWM-APEALFD-RIYTHQSDVWSFG 232
Query: 221 CMF 223
+
Sbjct: 233 VLL 235
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 60/123 (48%), Gaps = 10/123 (8%)
Query: 105 QHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVM 164
Q + P L + Y S + + L+ D+ Y++ + ++Y S+ +HRD+ NV+
Sbjct: 118 QARRPPGLEYSYNPSHNPE---EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 174
Query: 165 IDHELRKLRLIDWGLAEFYHP----GKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLG 220
+ + +++ D+GLA H K N R+ ++ PE L D + Y + D+WS G
Sbjct: 175 VTED-NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWM-APEALFD-RIYTHQSDVWSFG 231
Query: 221 CMF 223
+
Sbjct: 232 VLL 234
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 60/123 (48%), Gaps = 10/123 (8%)
Query: 105 QHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVM 164
Q + P L + Y S + + L+ D+ Y++ + ++Y S+ +HRD+ NV+
Sbjct: 126 QARRPPGLEYSYNPSHNPE---EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 182
Query: 165 IDHELRKLRLIDWGLAEFYHP----GKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLG 220
+ + +++ D+GLA H K N R+ ++ PE L D + Y + D+WS G
Sbjct: 183 VTED-NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWM-APEALFD-RIYTHQSDVWSFG 239
Query: 221 CMF 223
+
Sbjct: 240 VLL 242
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA------EF 182
+T D+ Y+L + ++Y SQ +HRD+ NV++ E +++ D+GLA ++
Sbjct: 143 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV-TENNVMKIADFGLARDINNIDY 201
Query: 183 YHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMF 223
Y K N R+ ++ PE L D + Y + D+WS G +
Sbjct: 202 YK--KTTNGRLPVKWM-APEALFD-RVYTHQSDVWSFGVLM 238
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA------EF 182
+T D+ Y+L + ++Y SQ +HRD+ NV++ E +++ D+GLA ++
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV-TENNVMKIADFGLARDINNIDY 212
Query: 183 YHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMF 223
Y K N R+ ++ PE L D + Y + D+WS G +
Sbjct: 213 YK--KTTNGRLPVKWM-APEALFD-RVYTHQSDVWSFGVLM 249
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA------EF 182
+T D+ Y+L + ++Y SQ +HRD+ NV++ E +++ D+GLA ++
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV-TENNVMKIADFGLARDINNIDY 212
Query: 183 YHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMF 223
Y K N R+ ++ PE L D + Y + D+WS G +
Sbjct: 213 YK--KTTNGRLPVKWM-APEALFD-RVYTHQSDVWSFGVLM 249
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA------EF 182
+T D+ Y+L + ++Y SQ +HRD+ NV++ E +++ D+GLA ++
Sbjct: 146 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV-TENNVMKIADFGLARDINNIDY 204
Query: 183 YHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMF 223
Y K N R+ ++ PE L D + Y + D+WS G +
Sbjct: 205 YK--KTTNGRLPVKWM-APEALFD-RVYTHQSDVWSFGVLM 241
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA------EF 182
+T D+ Y+L + ++Y SQ +HRD+ NV++ E +++ D+GLA ++
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV-TENNVMKIADFGLARDINNIDY 212
Query: 183 YHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMF 223
Y K N R+ ++ PE L D + Y + D+WS G +
Sbjct: 213 YK--KTTNGRLPVKWM-APEALFD-RVYTHQSDVWSFGVLM 249
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 60/123 (48%), Gaps = 10/123 (8%)
Query: 105 QHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVM 164
Q + P L + Y S + + L+ D+ Y++ + ++Y S+ +HRD+ NV+
Sbjct: 115 QARRPPGLEYSYNPSHNPE---EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 171
Query: 165 IDHELRKLRLIDWGLAEFYHP----GKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLG 220
+ + +++ D+GLA H K N R+ ++ PE L D + Y + D+WS G
Sbjct: 172 VTED-NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWM-APEALFD-RIYTHQSDVWSFG 228
Query: 221 CMF 223
+
Sbjct: 229 VLL 231
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA------EF 182
+T D+ Y+L + ++Y SQ +HRD+ NV++ E +++ D+GLA ++
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV-TENNVMKIADFGLARDINNIDY 212
Query: 183 YHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMF 223
Y K N R+ ++ PE L D + Y + D+WS G +
Sbjct: 213 YK--KTTNGRLPVKWM-APEALFD-RVYTHQSDVWSFGVLM 249
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA------EF 182
+T D+ Y+L + ++Y SQ +HRD+ NV++ E +++ D+GLA ++
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV-TENNVMKIADFGLARDINNIDY 212
Query: 183 YHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMF 223
Y K N R+ ++ PE L D + Y + D+WS G +
Sbjct: 213 YK--KTTNGRLPVKWM-APEALFD-RVYTHQSDVWSFGVLM 249
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 95/252 (37%), Gaps = 64/252 (25%)
Query: 134 IRYYIYELLKALDYCHSQG-IMHRDVKPHNVMI--------------------------- 165
++ I ++L+ LDY H++ I+H D+KP N+++
Sbjct: 148 VKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSG 207
Query: 166 ---------------------DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELL 204
+ E K+++ D G A + H K + + +R ++ E+L
Sbjct: 208 SAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVH--KHFTEDIQTRQYRSLEVL 265
Query: 205 VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHD------NHDQLVKIAKVLGTDELNAY 258
+ Y+ D+WS CM A + + F H + D + I ++LG
Sbjct: 266 IG-SGYNTPADIWSTACM-AFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLI 323
Query: 259 L-NKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEA----IDFLDKLLRYDHQDR 313
+ KY E + L KPW F ++ S E DFL +L + R
Sbjct: 324 VAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKR 383
Query: 314 LTAREAMAHPYF 325
TA E + HP+
Sbjct: 384 ATAAECLRHPWL 395
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 75/162 (46%), Gaps = 15/162 (9%)
Query: 93 PNVVKLLDIVRDQHSKTPS-LIFEYVNSTDFKVLYP----TLTDYDIRYYIYELLKALDY 147
P++VKL+ ++ ++ P +I E + + +L + Y Y+L AL Y
Sbjct: 74 PHIVKLIGVI----TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAY 129
Query: 148 CHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFK--GPELLV 205
S+ +HRD+ NV++ ++L D+GL+ + Y K PE +
Sbjct: 130 LESKRFVHRDIAARNVLVSSN-DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE-SI 187
Query: 206 DLQDYDYSLDMWSLG-CMFAGMIFRKEPFFYGHDNHDQLVKI 246
+ + + + D+W G CM+ ++ +P F G N+D + +I
Sbjct: 188 NFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 228
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 95/225 (42%), Gaps = 21/225 (9%)
Query: 36 DQDDYEVVRKVGRGKYSEVFEGINVNT-NERCXXXXXXXXXXXXXXXXXXXLQNLCGG-- 92
++ E+ R +G G++ +V +GI ++ N LQ
Sbjct: 8 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQ 67
Query: 93 ---PNVVKLLDIVRDQHSKTPS-LIFEYVNSTDFKVLYP----TLTDYDIRYYIYELLKA 144
P++VKL+ ++ ++ P +I E + + +L + Y Y+L A
Sbjct: 68 FDHPHIVKLIGVI----TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 123
Query: 145 LDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFK--GPE 202
L Y S+ +HRD+ NV++ ++L D+GL+ + Y K PE
Sbjct: 124 LAYLESKRFVHRDIAARNVLVSSN-DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 182
Query: 203 LLVDLQDYDYSLDMWSLG-CMFAGMIFRKEPFFYGHDNHDQLVKI 246
++ + + + D+W G CM+ ++ +P F G N+D + +I
Sbjct: 183 -SINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 225
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 95/225 (42%), Gaps = 21/225 (9%)
Query: 36 DQDDYEVVRKVGRGKYSEVFEGINVNT-NERCXXXXXXXXXXXXXXXXXXXLQNLCGG-- 92
++ E+ R +G G++ +V +GI ++ N LQ
Sbjct: 8 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQ 67
Query: 93 ---PNVVKLLDIVRDQHSKTPS-LIFEYVNSTDFKVLYP----TLTDYDIRYYIYELLKA 144
P++VKL+ ++ ++ P +I E + + +L + Y Y+L A
Sbjct: 68 FDHPHIVKLIGVI----TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 123
Query: 145 LDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFK--GPE 202
L Y S+ +HRD+ NV++ ++L D+GL+ + Y K PE
Sbjct: 124 LAYLESKRFVHRDIAARNVLVSSN-DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 182
Query: 203 LLVDLQDYDYSLDMWSLG-CMFAGMIFRKEPFFYGHDNHDQLVKI 246
++ + + + D+W G CM+ ++ +P F G N+D + +I
Sbjct: 183 -SINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 225
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 100/252 (39%), Gaps = 45/252 (17%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDF---KVLYPTLTDYDIRYYIYELL------- 142
PN+++L +V + P +I T+F L L D ++ + +L+
Sbjct: 77 PNIIRLEGVVTNS---MPVMIL-----TEFMENGALDSFLRLNDGQFTVIQLVGMLRGIA 128
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFK--- 199
+ Y +HRD+ N++++ L ++ D+GL+ F +S K
Sbjct: 129 SGMRYLAEMSYVHRDLAARNILVNSNL-VCKVSDFGLSRFLEENSSDPTETSSLGGKIPI 187
Query: 200 ---GPELLVDLQDYDYSLDMWSLG-CMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDEL 255
PE + + + + D WS G M+ M F + P++ D +Q D +
Sbjct: 188 RWTAPEAIA-FRKFTSASDAWSYGIVMWEVMSFGERPYW---DMSNQ----------DVI 233
Query: 256 NAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLT 315
NA Y L P + + W K NA + P+ + LDK++R ++
Sbjct: 234 NAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRF---PQVVSALDKMIRNPASLKIV 290
Query: 316 ARE--AMAHPYF 325
ARE +HP
Sbjct: 291 ARENGGASHPLL 302
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 60/123 (48%), Gaps = 10/123 (8%)
Query: 105 QHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVM 164
Q + P L + Y S + + L+ D+ Y++ + ++Y S+ +HRD+ NV+
Sbjct: 167 QARRPPGLEYSYNPSHNPE---EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 223
Query: 165 IDHELRKLRLIDWGLAEFYHP----GKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLG 220
+ + +++ D+GLA H K N R+ ++ PE L D + Y + D+WS G
Sbjct: 224 VTED-NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWM-APEALFD-RIYTHQSDVWSFG 280
Query: 221 CMF 223
+
Sbjct: 281 VLL 283
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 95/225 (42%), Gaps = 21/225 (9%)
Query: 36 DQDDYEVVRKVGRGKYSEVFEGINVNT-NERCXXXXXXXXXXXXXXXXXXXLQNLCGG-- 92
++ E+ R +G G++ +V +GI ++ N LQ
Sbjct: 5 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQ 64
Query: 93 ---PNVVKLLDIVRDQHSKTPS-LIFEYVNSTDFKVLYP----TLTDYDIRYYIYELLKA 144
P++VKL+ ++ ++ P +I E + + +L + Y Y+L A
Sbjct: 65 FDHPHIVKLIGVI----TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 120
Query: 145 LDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFK--GPE 202
L Y S+ +HRD+ NV++ ++L D+GL+ + Y K PE
Sbjct: 121 LAYLESKRFVHRDIAARNVLVSSN-DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 179
Query: 203 LLVDLQDYDYSLDMWSLG-CMFAGMIFRKEPFFYGHDNHDQLVKI 246
++ + + + D+W G CM+ ++ +P F G N+D + +I
Sbjct: 180 -SINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 222
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 75/162 (46%), Gaps = 15/162 (9%)
Query: 93 PNVVKLLDIVRDQHSKTPS-LIFEYVNSTDFKVLYP----TLTDYDIRYYIYELLKALDY 147
P++VKL+ ++ ++ P +I E + + +L + Y Y+L AL Y
Sbjct: 73 PHIVKLIGVI----TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAY 128
Query: 148 CHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFK--GPELLV 205
S+ +HRD+ NV++ ++L D+GL+ + Y K PE +
Sbjct: 129 LESKRFVHRDIAARNVLVSSN-DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE-SI 186
Query: 206 DLQDYDYSLDMWSLG-CMFAGMIFRKEPFFYGHDNHDQLVKI 246
+ + + + D+W G CM+ ++ +P F G N+D + +I
Sbjct: 187 NFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 227
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 95/225 (42%), Gaps = 21/225 (9%)
Query: 36 DQDDYEVVRKVGRGKYSEVFEGINVNT-NERCXXXXXXXXXXXXXXXXXXXLQNLCGG-- 92
++ E+ R +G G++ +V +GI ++ N LQ
Sbjct: 8 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQ 67
Query: 93 ---PNVVKLLDIVRDQHSKTPS-LIFEYVNSTDFKVLYP----TLTDYDIRYYIYELLKA 144
P++VKL+ ++ ++ P +I E + + +L + Y Y+L A
Sbjct: 68 FDHPHIVKLIGVI----TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTA 123
Query: 145 LDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFK--GPE 202
L Y S+ +HRD+ NV++ ++L D+GL+ + Y K PE
Sbjct: 124 LAYLESKRFVHRDIAARNVLVSAT-DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 182
Query: 203 LLVDLQDYDYSLDMWSLG-CMFAGMIFRKEPFFYGHDNHDQLVKI 246
++ + + + D+W G CM+ ++ +P F G N+D + +I
Sbjct: 183 -SINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 225
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 72/163 (44%), Gaps = 22/163 (13%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLY------PTLTDYDIRYYIYELLKALD 146
PNV+ L+ I+ P ++ Y+ D PT+ D + + ++ + ++
Sbjct: 82 PNVLALIGIMLPPEG-LPHVLLPYMCHGDLLQFIRSPQRNPTVKD--LISFGLQVARGME 138
Query: 147 YCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA------EFYHPGKEYNVRVASRYFKG 200
Y Q +HRD+ N M+D +++ D+GLA E+Y + + R+ ++
Sbjct: 139 YLAEQKFVHRDLAARNCMLDESF-TVKVADFGLARDILDREYYSVQQHRHARLPVKWTA- 196
Query: 201 PELLVDLQDYDYSL--DMWSLGCMFAGMIFRKEPFFYGHDNHD 241
L LQ Y ++ D+WS G + ++ R P + D D
Sbjct: 197 ---LESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFD 236
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 57/107 (53%), Gaps = 7/107 (6%)
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEF---YHPGKEYNVRVASRYFK 199
+ +DY H++ I+HRD+K +N+ + HE +++ D+GLA + ++ S +
Sbjct: 120 QGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 178
Query: 200 GPEL--LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLV 244
PE+ + D Y + D+++ G + ++ + P + +N DQ++
Sbjct: 179 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP-YSNINNRDQII 224
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 60/123 (48%), Gaps = 10/123 (8%)
Query: 105 QHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVM 164
Q + P L + Y S + + L+ D+ Y++ + ++Y S+ +HRD+ NV+
Sbjct: 126 QAREPPGLEYSYNPSHNPE---EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 182
Query: 165 IDHELRKLRLIDWGLAEFYHP----GKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLG 220
+ + +++ D+GLA H K N R+ ++ PE L D + Y + D+WS G
Sbjct: 183 VTED-NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWM-APEALFD-RIYTHQSDVWSFG 239
Query: 221 CMF 223
+
Sbjct: 240 VLL 242
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 57/107 (53%), Gaps = 7/107 (6%)
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEF---YHPGKEYNVRVASRYFK 199
+ +DY H++ I+HRD+K +N+ + HE +++ D+GLA + ++ S +
Sbjct: 115 QGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 173
Query: 200 GPEL--LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLV 244
PE+ + D Y + D+++ G + ++ + P + +N DQ++
Sbjct: 174 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP-YSNINNRDQII 219
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 75/162 (46%), Gaps = 15/162 (9%)
Query: 93 PNVVKLLDIVRDQHSKTPS-LIFEYVNSTDFKVLYP----TLTDYDIRYYIYELLKALDY 147
P++VKL+ ++ ++ P +I E + + +L + Y Y+L AL Y
Sbjct: 451 PHIVKLIGVI----TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAY 506
Query: 148 CHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFK--GPELLV 205
S+ +HRD+ NV++ ++L D+GL+ + Y K PE +
Sbjct: 507 LESKRFVHRDIAARNVLVSSN-DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE-SI 564
Query: 206 DLQDYDYSLDMWSLG-CMFAGMIFRKEPFFYGHDNHDQLVKI 246
+ + + + D+W G CM+ ++ +P F G N+D + +I
Sbjct: 565 NFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 605
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 57/107 (53%), Gaps = 7/107 (6%)
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEF---YHPGKEYNVRVASRYFK 199
+ +DY H++ I+HRD+K +N+ + HE +++ D+GLA + ++ S +
Sbjct: 120 QGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 178
Query: 200 GPEL--LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLV 244
PE+ + D Y + D+++ G + ++ + P + +N DQ++
Sbjct: 179 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP-YSNINNRDQII 224
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 57/107 (53%), Gaps = 7/107 (6%)
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEF---YHPGKEYNVRVASRYFK 199
+ +DY H++ I+HRD+K +N+ + HE +++ D+GLA + ++ S +
Sbjct: 117 QGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 175
Query: 200 GPEL--LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLV 244
PE+ + D Y + D+++ G + ++ + P + +N DQ++
Sbjct: 176 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP-YSNINNRDQII 221
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 57/107 (53%), Gaps = 7/107 (6%)
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEF---YHPGKEYNVRVASRYFK 199
+ +DY H++ I+HRD+K +N+ + HE +++ D+GLA + ++ S +
Sbjct: 115 QGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 173
Query: 200 GPEL--LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLV 244
PE+ + D Y + D+++ G + ++ + P + +N DQ++
Sbjct: 174 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP-YSNINNRDQII 219
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 12/94 (12%)
Query: 147 YCHSQG----IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK---EYNVRVASRYFK 199
+C +G I HRD K NV++ +L + L D+GLA + PGK + + +V +R +
Sbjct: 134 WCRGEGHKPSIAHRDFKSKNVLLKSDLTAV-LADFGLAVRFEPGKPPGDTHGQVGTRRYM 192
Query: 200 GPELL---VDLQ-DYDYSLDMWSLGCMFAGMIFR 229
PE+L ++ Q D +DM+++G + ++ R
Sbjct: 193 APEVLEGAINFQRDAFLRIDMYAMGLVLWELVSR 226
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 58/110 (52%), Gaps = 7/110 (6%)
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEF---YHPGKEYNVRVASR 196
+ + +DY H++ I+HRD+K +N+ + HE +++ D+GLA + ++ S
Sbjct: 139 QTAQGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI 197
Query: 197 YFKGPEL--LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLV 244
+ PE+ + D Y + D+++ G + ++ + P + +N DQ++
Sbjct: 198 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP-YSNINNRDQII 246
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 96/229 (41%), Gaps = 28/229 (12%)
Query: 39 DYEVVRK-------VGRGKYSEVFEGINVNT-NERCXXXXXXXXXXXXXXXXXXXLQNLC 90
DYE+ R+ +G G++ +V +GI ++ N LQ
Sbjct: 384 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 443
Query: 91 GG-----PNVVKLLDIVRDQHSKTPS-LIFEYVNSTDFKVLYP----TLTDYDIRYYIYE 140
P++VKL+ ++ ++ P +I E + + +L + Y Y+
Sbjct: 444 TMRQFDHPHIVKLIGVI----TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQ 499
Query: 141 LLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFK- 199
L AL Y S+ +HRD+ NV++ ++L D+GL+ + Y K
Sbjct: 500 LSTALAYLESKRFVHRDIAARNVLVS-ATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW 558
Query: 200 -GPELLVDLQDYDYSLDMWSLG-CMFAGMIFRKEPFFYGHDNHDQLVKI 246
PE ++ + + + D+W G CM+ ++ +P F G N+D + +I
Sbjct: 559 MAPE-SINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 605
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH---- 184
+T D+ Y+L + ++Y SQ +HRD+ NV++ E +++ D+GLA +
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV-TENNVMKIADFGLARDINNIDX 212
Query: 185 PGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMF 223
K N R+ ++ PE L D + Y + D+WS G +
Sbjct: 213 XKKTTNGRLPVKWM-APEALFD-RVYTHQSDVWSFGVLM 249
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 58/110 (52%), Gaps = 7/110 (6%)
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEF---YHPGKEYNVRVASR 196
+ + +DY H++ I+HRD+K +N+ + HE +++ D+GLA + ++ S
Sbjct: 140 QTAQGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI 198
Query: 197 YFKGPEL--LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLV 244
+ PE+ + D Y + D+++ G + ++ + P + +N DQ++
Sbjct: 199 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP-YSNINNRDQII 247
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH---- 184
+T D+ Y+L + ++Y SQ +HRD+ NV++ E +++ D+GLA +
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV-TENNVMKIADFGLARDINNIDX 212
Query: 185 PGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMF 223
K N R+ ++ PE L D + Y + D+WS G +
Sbjct: 213 XKKTTNGRLPVKWM-APEALFD-RVYTHQSDVWSFGVLM 249
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 80/212 (37%), Gaps = 29/212 (13%)
Query: 45 KVGRGKYSEVFEGINVNTNERCX--XXXXXXXXXXXXXXXXXXLQNLCG--GPNVVKLLD 100
++GRG + V++G++ T + L G PN+V+ D
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 101 IVRD--QHSKTPSLIFEYVNSTDFKVLYPTLTDYDI---RYYIYELLKALDYCHSQG--I 153
+ K L+ E S K I R + ++LK L + H++ I
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRTPPI 152
Query: 154 MHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYS 213
+HRD+K N+ I +++ D GLA V + + F PE + YD S
Sbjct: 153 IHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAV-IGTPEFXAPEXYEE--KYDES 209
Query: 214 LDMWSLG---------------CMFAGMIFRK 230
+D+++ G C A I+R+
Sbjct: 210 VDVYAFGXCXLEXATSEYPYSECQNAAQIYRR 241
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 69/153 (45%), Gaps = 20/153 (13%)
Query: 93 PNVVKLLDI-VRDQHSKTPSLIFEYVNSTDFKVLY------PTLTDYDIRYYIYELLKAL 145
PNV+ LL I +R + S P ++ Y+ D + PT+ D + + ++ K +
Sbjct: 91 PNVLSLLGICLRSEGS--PLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGM 146
Query: 146 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA------EFYHPGKEYNVRVASRYFK 199
+ S+ +HRD+ N M+D + +++ D+GLA EF + ++ ++
Sbjct: 147 KFLASKKFVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
Query: 200 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEP 232
L Q + D+WS G + ++ R P
Sbjct: 206 LESL--QTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 69/153 (45%), Gaps = 20/153 (13%)
Query: 93 PNVVKLLDI-VRDQHSKTPSLIFEYVNSTDFKVLY------PTLTDYDIRYYIYELLKAL 145
PNV+ LL I +R + S P ++ Y+ D + PT+ D + + ++ K +
Sbjct: 150 PNVLSLLGICLRSEGS--PLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGM 205
Query: 146 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA------EFYHPGKEYNVRVASRYFK 199
+ S+ +HRD+ N M+D + +++ D+GLA EF + ++ ++
Sbjct: 206 KFLASKKFVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 264
Query: 200 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEP 232
L Q + D+WS G + ++ R P
Sbjct: 265 LESL--QTQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP--- 185
L+ D+ Y++ + ++Y S+ +HRD+ NV++ + +++ D+GLA H
Sbjct: 132 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED-NVMKIADFGLARDIHHIDY 190
Query: 186 -GKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMF 223
K N R+ ++ PE L D + Y + D+WS G +
Sbjct: 191 YKKTTNGRLPVKWM-APEALFD-RIYTHQSDVWSFGVLL 227
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 69/153 (45%), Gaps = 20/153 (13%)
Query: 93 PNVVKLLDI-VRDQHSKTPSLIFEYVNSTDFKVLY------PTLTDYDIRYYIYELLKAL 145
PNV+ LL I +R + S P ++ Y+ D + PT+ D + + ++ K +
Sbjct: 92 PNVLSLLGICLRSEGS--PLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGM 147
Query: 146 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA------EFYHPGKEYNVRVASRYFK 199
+ S+ +HRD+ N M+D + +++ D+GLA EF + ++ ++
Sbjct: 148 KFLASKKFVHRDLAARNCMLDEKF-TVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMA 206
Query: 200 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEP 232
L Q + D+WS G + ++ R P
Sbjct: 207 LESL--QTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 69/153 (45%), Gaps = 20/153 (13%)
Query: 93 PNVVKLLDI-VRDQHSKTPSLIFEYVNSTDFKVLY------PTLTDYDIRYYIYELLKAL 145
PNV+ LL I +R + S P ++ Y+ D + PT+ D + + ++ K +
Sbjct: 89 PNVLSLLGICLRSEGS--PLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGM 144
Query: 146 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA------EFYHPGKEYNVRVASRYFK 199
+ S+ +HRD+ N M+D + +++ D+GLA EF + ++ ++
Sbjct: 145 KFLASKKFVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 203
Query: 200 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEP 232
L Q + D+WS G + ++ R P
Sbjct: 204 LESL--QTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 69/153 (45%), Gaps = 20/153 (13%)
Query: 93 PNVVKLLDI-VRDQHSKTPSLIFEYVNSTDFKVLY------PTLTDYDIRYYIYELLKAL 145
PNV+ LL I +R + S P ++ Y+ D + PT+ D + + ++ K +
Sbjct: 92 PNVLSLLGICLRSEGS--PLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGM 147
Query: 146 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA------EFYHPGKEYNVRVASRYFK 199
+ S+ +HRD+ N M+D + +++ D+GLA EF + ++ ++
Sbjct: 148 KFLASKKFVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 206
Query: 200 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEP 232
L Q + D+WS G + ++ R P
Sbjct: 207 LESL--QTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 7/131 (5%)
Query: 98 LLDIVRDQHSKTPSLIFEYVNSTDFKVL--YPTLTDYDIRYYIYELLKALDYCHSQGIMH 155
LL+ +R + K EY N + LT D+ + Y++ K +++ + +H
Sbjct: 136 LLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVH 195
Query: 156 RDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY---FKGPELLVDLQDYDY 212
RD+ NV++ H + +++ D+GLA Y VR +R + PE L + Y
Sbjct: 196 RDLAARNVLVTHG-KVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFE-GIYTI 253
Query: 213 SLDMWSLGCMF 223
D+WS G +
Sbjct: 254 KSDVWSYGILL 264
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 57/107 (53%), Gaps = 7/107 (6%)
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA---EFYHPGKEYNVRVASRYFK 199
+ +DY H++ I+HRD+K +N+ + HE +++ D+GLA + ++ S +
Sbjct: 115 QGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 173
Query: 200 GPEL--LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLV 244
PE+ + D Y + D+++ G + ++ + P + +N DQ++
Sbjct: 174 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP-YSNINNRDQII 219
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK---EYNVRV 193
Y++E + L H I HRD+K NV++ + L + D+GLA + GK + + +V
Sbjct: 136 YLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTAC-IADFGLALKFEAGKSAGDTHGQV 194
Query: 194 ASRYFKGPELL---VDLQ-DYDYSLDMWSLGCMF 223
+R + PE+L ++ Q D +DM+++G +
Sbjct: 195 GTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVL 228
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 69/153 (45%), Gaps = 20/153 (13%)
Query: 93 PNVVKLLDI-VRDQHSKTPSLIFEYVNSTDFKVLY------PTLTDYDIRYYIYELLKAL 145
PNV+ LL I +R + S P ++ Y+ D + PT+ D + + ++ K +
Sbjct: 91 PNVLSLLGICLRSEGS--PLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGM 146
Query: 146 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA------EFYHPGKEYNVRVASRYFK 199
+ S+ +HRD+ N M+D + +++ D+GLA EF + ++ ++
Sbjct: 147 KFLASKKFVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
Query: 200 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEP 232
L Q + D+WS G + ++ R P
Sbjct: 206 LESL--QTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 141 LLKALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 199
++K L Y + IMHRDVKP N++++ +++L D+G++ N V +R +
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVNSR-GEIKLCDFGVSGQLI-DSMANSFVGTRSYM 170
Query: 200 GPELLVDLQDYDYSL--DMWSLGCMFAGMIFRKEPF 233
PE LQ YS+ D+WS+G M + P
Sbjct: 171 SPE---RLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 57/107 (53%), Gaps = 7/107 (6%)
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA---EFYHPGKEYNVRVASRYFK 199
+ +DY H++ I+HRD+K +N+ + HE +++ D+GLA + ++ S +
Sbjct: 135 QGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 193
Query: 200 GPEL--LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLV 244
PE+ + D Y + D+++ G + ++ + P + +N DQ++
Sbjct: 194 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP-YSNINNRDQII 239
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP--- 185
L+ D+ Y++ + ++Y S+ +HRD+ NV++ + +++ D+GLA H
Sbjct: 147 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED-NVMKIADFGLARDIHHIDY 205
Query: 186 -GKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMF 223
K N R+ ++ PE L D + Y + D+WS G +
Sbjct: 206 YKKTTNGRLPVKWM-APEALFD-RIYTHQSDVWSFGVLL 242
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 69/153 (45%), Gaps = 20/153 (13%)
Query: 93 PNVVKLLDI-VRDQHSKTPSLIFEYVNSTDFKVLY------PTLTDYDIRYYIYELLKAL 145
PNV+ LL I +R + S P ++ Y+ D + PT+ D + + ++ K +
Sbjct: 96 PNVLSLLGICLRSEGS--PLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGM 151
Query: 146 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA------EFYHPGKEYNVRVASRYFK 199
+ S+ +HRD+ N M+D + +++ D+GLA EF + ++ ++
Sbjct: 152 KFLASKKFVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 210
Query: 200 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEP 232
L Q + D+WS G + ++ R P
Sbjct: 211 LESL--QTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 57/107 (53%), Gaps = 7/107 (6%)
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA---EFYHPGKEYNVRVASRYFK 199
+ +DY H++ I+HRD+K +N+ + HE +++ D+GLA + ++ S +
Sbjct: 143 QGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 201
Query: 200 GPEL--LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLV 244
PE+ + D Y + D+++ G + ++ + P + +N DQ++
Sbjct: 202 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP-YSNINNRDQII 247
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 8/95 (8%)
Query: 141 LLKALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 199
++K L Y + IMHRDVKP N++++ +++L D+G++ + N V +R +
Sbjct: 116 VIKGLTYLREKHKIMHRDVKPSNILVNSR-GEIKLCDFGVSGQLI-DEMANEFVGTRSYM 173
Query: 200 GPELLVDLQDYDYSL--DMWSLGCMFAGMIFRKEP 232
PE LQ YS+ D+WS+G M + P
Sbjct: 174 SPE---RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 68/153 (44%), Gaps = 20/153 (13%)
Query: 93 PNVVKLLDI-VRDQHSKTPSLIFEYVNSTDFKVLY------PTLTDYDIRYYIYELLKAL 145
PNV+ LL I +R + S P ++ Y+ D + PT+ D + + ++ K +
Sbjct: 90 PNVLSLLGICLRSEGS--PLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGM 145
Query: 146 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA------EFYHPGKEYNVRVASRYFK 199
Y S+ +HRD+ N M+D + +++ D+GLA E + ++ ++
Sbjct: 146 KYLASKKFVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMA 204
Query: 200 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEP 232
L Q + D+WS G + ++ R P
Sbjct: 205 LESL--QTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 94/225 (41%), Gaps = 21/225 (9%)
Query: 36 DQDDYEVVRKVGRGKYSEVFEGINVNT-NERCXXXXXXXXXXXXXXXXXXXLQNLCGG-- 92
++ E+ R +G G++ +V +GI ++ N LQ
Sbjct: 8 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQ 67
Query: 93 ---PNVVKLLDIVRDQHSKTPS-LIFEYVNSTDFKVLYP----TLTDYDIRYYIYELLKA 144
P++VKL+ ++ ++ P +I E + + +L + Y Y+L A
Sbjct: 68 FDHPHIVKLIGVI----TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTA 123
Query: 145 LDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFK--GPE 202
L Y S+ +HRD+ NV++ ++L D+GL+ + K PE
Sbjct: 124 LAYLESKRFVHRDIAARNVLVSSN-DCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPE 182
Query: 203 LLVDLQDYDYSLDMWSLG-CMFAGMIFRKEPFFYGHDNHDQLVKI 246
++ + + + D+W G CM+ ++ +P F G N+D + +I
Sbjct: 183 -SINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 225
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA------EF 182
+T D+ Y+L + ++Y SQ +HRD+ NV++ E +++ D+GLA ++
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV-TENNVMKIADFGLARDINNIDY 212
Query: 183 YHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMF 223
Y N R+ ++ PE L D + Y + D+WS G +
Sbjct: 213 YK--NTTNGRLPVKWM-APEALFD-RVYTHQSDVWSFGVLM 249
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 81/180 (45%), Gaps = 31/180 (17%)
Query: 86 LQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDF------------KVLYPTLTDYD 133
++ L G PN+V+ ++ + E++ T+ + P D
Sbjct: 79 MKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTV 138
Query: 134 IRYYIYELLKALDYCHSQG--IMHRDVKPHNVMIDHELRKLRLIDWGLAEF--YHPG--- 186
++ + Y+ +A+ + H Q I+HRD+K N+++ ++ ++L D+G A ++P
Sbjct: 139 LKIF-YQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQ-GTIKLCDFGSATTISHYPDYSW 196
Query: 187 --------KEYNVRVASRYFKGPELLVDLQDYDYS--LDMWSLGCMFAGMIFRKEPFFYG 236
+E R + ++ PE++ ++ D+W+LGC+ + FR+ PF G
Sbjct: 197 SAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDG 256
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 29/177 (16%)
Query: 94 NVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYE---------LLKA 144
N+VKL I + ++ LI E+ LY L + Y + E ++
Sbjct: 68 NIVKLFAIEEETTTRHKVLIMEFCPCGS---LYTVLEEPSNAYGLPESEFLIVLRDVVGG 124
Query: 145 LDYCHSQGIMHRDVKPHNVM--IDHELRKL-RLIDWGLAEFYHPGKEYNVRVASRYFKGP 201
+++ GI+HR++KP N+M I + + + +L D+G A +++ + + P
Sbjct: 125 MNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHP 184
Query: 202 E------LLVDLQ-DYDYSLDMWSLGCMF-----AGMIFRKEPFFYGHDNHDQLVKI 246
+ L D Q Y ++D+WS+G F + FR PF N + + KI
Sbjct: 185 DMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFR--PFEGPRRNKEVMYKI 239
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 98/243 (40%), Gaps = 43/243 (17%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDF---KVLYPTLTDYDIRYYIYELL------- 142
PN+++L +V + P +I T+F L L D ++ + +L+
Sbjct: 75 PNIIRLEGVVTNS---MPVMIL-----TEFMENGALDSFLRLNDGQFTVIQLVGMLRGIA 126
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE---YNVRVASRY-- 197
+ Y +HRD+ N++++ L ++ D+GL+ F Y + +
Sbjct: 127 SGMRYLAEMSYVHRDLAARNILVNSNL-VCKVSDFGLSRFLEENSSDPTYTSSLGGKIPI 185
Query: 198 -FKGPELLVDLQDYDYSLDMWSLG-CMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDEL 255
+ PE + + + + D WS G M+ M F + P++ D +Q D +
Sbjct: 186 RWTAPEAIA-FRKFTSASDAWSYGIVMWEVMSFGERPYW---DMSNQ----------DVI 231
Query: 256 NAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLT 315
NA Y L P + + W K NA + P+ + LDK++R ++
Sbjct: 232 NAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRF---PQVVSALDKMIRNPASLKIV 288
Query: 316 ARE 318
ARE
Sbjct: 289 ARE 291
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 82/188 (43%), Gaps = 30/188 (15%)
Query: 94 NVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDY-----------DIRYYIYELL 142
N+VK + + LI EY+ Y +L DY + Y ++
Sbjct: 72 NIVKYKGVCYSAGRRNLKLIMEYLP-------YGSLRDYLQKHKERIDHIKLLQYTSQIC 124
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE-YNVRVASR---YF 198
K ++Y ++ +HRD+ N+++++E R +++ D+GL + KE + V+ ++
Sbjct: 125 KGMEYLGTKRYIHRDLATRNILVENENR-VKIGDFGLTKVLPQDKEFFKVKEPGESPIFW 183
Query: 199 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAY 258
PE L + + + D+WS G + E F Y + + +++G D+
Sbjct: 184 YAPESLTE-SKFSVASDVWSFGVVLY------ELFTYIEKSKSPPAEFMRMIGNDKQGQM 236
Query: 259 LNKYHLEL 266
+ + +EL
Sbjct: 237 IVFHLIEL 244
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 60/144 (41%), Gaps = 24/144 (16%)
Query: 152 GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY-----NVRVASRYFKGPELLVD 206
I HRD K NV++ L+ + D GLA + G +Y N RV ++ + PE+L +
Sbjct: 133 AIAHRDFKSRNVLVKSNLQCC-IADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVLDE 191
Query: 207 ------LQDYDYSLDMWSLGCMFAGMIFR----------KEPFFYGHDNHDQLVKIAKVL 250
+ Y ++ D+W+ G + + R + PF+ N + KV+
Sbjct: 192 QIRTDCFESYKWT-DIWAFGLVLWEIARRTIVNGIVEDYRPPFYDVVPNDPSFEDMKKVV 250
Query: 251 GTDELNAYLNKYHLELDPQLDALV 274
D+ + L DP L L
Sbjct: 251 CVDQQTPTIPN-RLAADPVLSGLA 273
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 32/48 (66%), Gaps = 4/48 (8%)
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRK----LRLIDWGLAEFY 183
+LL ++Y HS+ +++RDVKP N +I + K + +ID+GLA+ Y
Sbjct: 105 QLLSRMEYVHSKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEY 152
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 29/177 (16%)
Query: 94 NVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYE---------LLKA 144
N+VKL I + ++ LI E+ LY L + Y + E ++
Sbjct: 68 NIVKLFAIEEETTTRHKVLIMEFCPCGS---LYTVLEEPSNAYGLPESEFLIVLRDVVGG 124
Query: 145 LDYCHSQGIMHRDVKPHNVM--IDHELRKL-RLIDWGLAEFYHPGKEYNVRVASRYFKGP 201
+++ GI+HR++KP N+M I + + + +L D+G A +++ + + P
Sbjct: 125 MNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHP 184
Query: 202 E------LLVDLQ-DYDYSLDMWSLGCMF-----AGMIFRKEPFFYGHDNHDQLVKI 246
+ L D Q Y ++D+WS+G F + FR PF N + + KI
Sbjct: 185 DMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFR--PFEGPRRNKEVMYKI 239
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 71/156 (45%), Gaps = 22/156 (14%)
Query: 93 PNVVKLLDIVRDQHSKTPSL--IFEYVNSTDF-KVLYPTLTDYDIRY-YIYELLKALDYC 148
PN++ L R K P+L + E+ +VL DI + ++ + ++Y
Sbjct: 66 PNIIAL----RGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYL 121
Query: 149 HSQGI---MHRDVKPHNVMI-------DHELRKLRLIDWGLAEFYHPGKEYNVRVASRY- 197
H + I +HRD+K N++I D + L++ D+GLA +H + + A Y
Sbjct: 122 HDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWH--RTTKMSAAGAYA 179
Query: 198 FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 233
+ PE ++ + D+WS G + ++ + PF
Sbjct: 180 WMAPE-VIRASMFSKGSDVWSYGVLLWELLTGEVPF 214
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 82/188 (43%), Gaps = 30/188 (15%)
Query: 94 NVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDY-----------DIRYYIYELL 142
N+VK + + LI EY+ Y +L DY + Y ++
Sbjct: 73 NIVKYKGVCYSAGRRNLKLIMEYLP-------YGSLRDYLQKHKERIDHIKLLQYTSQIC 125
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE-YNVRVASR---YF 198
K ++Y ++ +HR++ N+++++E R +++ D+GL + KE Y V+ ++
Sbjct: 126 KGMEYLGTKRYIHRNLATRNILVENENR-VKIGDFGLTKVLPQDKEYYKVKEPGESPIFW 184
Query: 199 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAY 258
PE L + + + D+WS G + E F Y + + +++G D+
Sbjct: 185 YAPESLTE-SKFSVASDVWSFGVVLY------ELFTYIEKSKSPPAEFMRMIGNDKQGQM 237
Query: 259 LNKYHLEL 266
+ + +EL
Sbjct: 238 IVFHLIEL 245
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 141 LLKALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 199
+L+ L Y + IMHRDVKP N++++ +++L D+G++ N V +R +
Sbjct: 123 VLRGLAYLREKHQIMHRDVKPSNILVNSR-GEIKLCDFGVSGQLI-DSMANSFVGTRSYM 180
Query: 200 GPELLVDLQDYDYSL--DMWSLGCMFAGMIFRKEPF 233
PE LQ YS+ D+WS+G + + P
Sbjct: 181 APE---RLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 53/102 (51%), Gaps = 15/102 (14%)
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE----------- 188
++ +A+++ HS+G+MHRD+KP N+ + +++ D+GL +E
Sbjct: 126 QIAEAVEFLHSKGLMHRDLKPSNIFFTMD-DVVKVGDFGLVTAMDQDEEEQTVLTPMPAY 184
Query: 189 --YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIF 228
+ +V ++ + PE + Y + +D++SLG + +++
Sbjct: 185 ARHTGQVGTKLYMSPE-QIHGNSYSHKVDIFSLGLILFELLY 225
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 53/102 (51%), Gaps = 15/102 (14%)
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV-------- 191
++ +A+++ HS+G+MHRD+KP N+ + +++ D+GL +E
Sbjct: 172 QIAEAVEFLHSKGLMHRDLKPSNIFFTMD-DVVKVGDFGLVTAMDQDEEEQTVLTPMPAY 230
Query: 192 -----RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIF 228
+V ++ + PE + +Y + +D++SLG + +++
Sbjct: 231 ATHXGQVGTKLYMSPE-QIHGNNYSHKVDIFSLGLILFELLY 271
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 67/150 (44%), Gaps = 16/150 (10%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTD-FKVLY-----PTLTDYDIRYYIYELLKALD 146
PN+VKL + L+ EY + VL+ P T + + + +
Sbjct: 62 PNIVKLYGACLNPVC----LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVA 117
Query: 147 YCHS---QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 203
Y HS + ++HRD+KP N+++ L++ D+G A N A+ + PE+
Sbjct: 118 YLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAA--WMAPEV 175
Query: 204 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 233
+ +Y D++S G + +I R++PF
Sbjct: 176 F-EGSNYSEKCDVFSWGIILWEVITRRKPF 204
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 95/220 (43%), Gaps = 24/220 (10%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELL-------KAL 145
PN+++L +V + ++ EY+ + L +D ++ I +L+ +
Sbjct: 110 PNIIRLEGVV--TRGRLAMIVTEYMENGSLDTF---LRTHDGQFTIMQLVGMLRGVGAGM 164
Query: 146 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH--PGKEYNV---RVASRYFKG 200
Y G +HRD+ NV++D L ++ D+GL+ P Y ++ R+
Sbjct: 165 RYLSDLGYVHRDLAARNVLVDSNL-VCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRW-TA 222
Query: 201 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLN 260
PE + + + + D+WS G + ++ E ++ N D I+ V L A +
Sbjct: 223 PEAIA-FRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD---VISSVEEGYRLPAPMG 278
Query: 261 KYHLELDPQLDALVGRHSRKP-WSKFINADNQHLVSPEAI 299
H LD +++P +S+ ++ + + SPE++
Sbjct: 279 CPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPESL 318
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 82/188 (43%), Gaps = 30/188 (15%)
Query: 94 NVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDY-----------DIRYYIYELL 142
N+VK + + LI EY+ Y +L DY + Y ++
Sbjct: 79 NIVKYKGVCYSAGRRNLKLIMEYLP-------YGSLRDYLQKHKERIDHIKLLQYTSQIC 131
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE-YNVRVASR---YF 198
K ++Y ++ +HRD+ N+++++E R +++ D+GL + KE V+ ++
Sbjct: 132 KGMEYLGTKRYIHRDLATRNILVENENR-VKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 190
Query: 199 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAY 258
PE L + + + + D+WS G + E F Y + + +++G D+
Sbjct: 191 YAPESLTESK-FSVASDVWSFGVVLY------ELFTYIEKSKSPPAEFMRMIGNDKQGQM 243
Query: 259 LNKYHLEL 266
+ + +EL
Sbjct: 244 IVFHLIEL 251
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 67/150 (44%), Gaps = 16/150 (10%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTD-FKVLY-----PTLTDYDIRYYIYELLKALD 146
PN+VKL + L+ EY + VL+ P T + + + +
Sbjct: 61 PNIVKLYGACLNPVC----LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVA 116
Query: 147 YCHS---QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 203
Y HS + ++HRD+KP N+++ L++ D+G A N A+ + PE+
Sbjct: 117 YLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAA--WMAPEV 174
Query: 204 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 233
+ +Y D++S G + +I R++PF
Sbjct: 175 F-EGSNYSEKCDVFSWGIILWEVITRRKPF 203
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 81/188 (43%), Gaps = 30/188 (15%)
Query: 94 NVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDY-----------DIRYYIYELL 142
N+VK + + LI EY+ Y +L DY + Y ++
Sbjct: 78 NIVKYKGVCYSAGRRNLKLIMEYLP-------YGSLRDYLQKHKERIDHIKLLQYTSQIC 130
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE-YNVRVASR---YF 198
K ++Y ++ +HRD+ N+++++E R +++ D+GL + KE V+ ++
Sbjct: 131 KGMEYLGTKRYIHRDLATRNILVENENR-VKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 189
Query: 199 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAY 258
PE L + + + D+WS G + E F Y + + +++G D+
Sbjct: 190 YAPESLTE-SKFSVASDVWSFGVVLY------ELFTYIEKSKSPPAEFMRMIGNDKQGQM 242
Query: 259 LNKYHLEL 266
+ + +EL
Sbjct: 243 IVFHLIEL 250
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 81/188 (43%), Gaps = 30/188 (15%)
Query: 94 NVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDY-----------DIRYYIYELL 142
N+VK + + LI EY+ Y +L DY + Y ++
Sbjct: 75 NIVKYKGVCYSAGRRNLKLIMEYLP-------YGSLRDYLQAHAERIDHIKLLQYTSQIC 127
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE-YNVRVASR---YF 198
K ++Y ++ +HRD+ N+++++E R +++ D+GL + KE V+ ++
Sbjct: 128 KGMEYLGTKRYIHRDLATRNILVENENR-VKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 186
Query: 199 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAY 258
PE L + + + D+WS G + E F Y + + +++G D+
Sbjct: 187 YAPESLTE-SKFSVASDVWSFGVVLY------ELFTYIEKSKSPPAEFMRMIGNDKQGQM 239
Query: 259 LNKYHLEL 266
+ + +EL
Sbjct: 240 IVFHLIEL 247
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 81/188 (43%), Gaps = 30/188 (15%)
Query: 94 NVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDY-----------DIRYYIYELL 142
N+VK + + LI EY+ Y +L DY + Y ++
Sbjct: 103 NIVKYKGVCYSAGRRNLKLIMEYLP-------YGSLRDYLQKHKERIDHIKLLQYTSQIC 155
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE-YNVRVASR---YF 198
K ++Y ++ +HRD+ N+++++E R +++ D+GL + KE V+ ++
Sbjct: 156 KGMEYLGTKRYIHRDLATRNILVENENR-VKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 214
Query: 199 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAY 258
PE L + + + D+WS G + E F Y + + +++G D+
Sbjct: 215 YAPESLTE-SKFSVASDVWSFGVVLY------ELFTYIEKSKSPPAEFMRMIGNDKQGQM 267
Query: 259 LNKYHLEL 266
+ + +EL
Sbjct: 268 IVFHLIEL 275
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 81/188 (43%), Gaps = 30/188 (15%)
Query: 94 NVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDY-----------DIRYYIYELL 142
N+VK + + LI EY+ Y +L DY + Y ++
Sbjct: 77 NIVKYKGVCYSAGRRNLKLIMEYLP-------YGSLRDYLQKHKERIDHIKLLQYTSQIC 129
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE-YNVRVASR---YF 198
K ++Y ++ +HRD+ N+++++E R +++ D+GL + KE V+ ++
Sbjct: 130 KGMEYLGTKRYIHRDLATRNILVENENR-VKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 188
Query: 199 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAY 258
PE L + + + D+WS G + E F Y + + +++G D+
Sbjct: 189 YAPESLTE-SKFSVASDVWSFGVVLY------ELFTYIEKSKSPPAEFMRMIGNDKQGQM 241
Query: 259 LNKYHLEL 266
+ + +EL
Sbjct: 242 IVFHLIEL 249
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 81/188 (43%), Gaps = 30/188 (15%)
Query: 94 NVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDY-----------DIRYYIYELL 142
N+VK + + LI EY+ Y +L DY + Y ++
Sbjct: 90 NIVKYKGVCYSAGRRNLKLIMEYLP-------YGSLRDYLQKHKERIDHIKLLQYTSQIC 142
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE-YNVRVASR---YF 198
K ++Y ++ +HRD+ N+++++E R +++ D+GL + KE V+ ++
Sbjct: 143 KGMEYLGTKRYIHRDLATRNILVENENR-VKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 201
Query: 199 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAY 258
PE L + + + D+WS G + E F Y + + +++G D+
Sbjct: 202 YAPESLTE-SKFSVASDVWSFGVVLY------ELFTYIEKSKSPPAEFMRMIGNDKQGQM 254
Query: 259 LNKYHLEL 266
+ + +EL
Sbjct: 255 IVFHLIEL 262
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 81/188 (43%), Gaps = 30/188 (15%)
Query: 94 NVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDY-----------DIRYYIYELL 142
N+VK + + LI EY+ Y +L DY + Y ++
Sbjct: 72 NIVKYKGVCYSAGRRNLKLIMEYLP-------YGSLRDYLQKHKERIDHIKLLQYTSQIC 124
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE-YNVRVASR---YF 198
K ++Y ++ +HRD+ N+++++E R +++ D+GL + KE V+ ++
Sbjct: 125 KGMEYLGTKRYIHRDLATRNILVENENR-VKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 183
Query: 199 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAY 258
PE L + + + D+WS G + E F Y + + +++G D+
Sbjct: 184 YAPESLTE-SKFSVASDVWSFGVVLY------ELFTYIEKSKSPPAEFMRMIGNDKQGQM 236
Query: 259 LNKYHLEL 266
+ + +EL
Sbjct: 237 IVFHLIEL 244
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 196
+ Y++ K + + S+ +HRD+ N+++ H R ++ D+GLA Y V+ +R
Sbjct: 173 FSYQVAKGMAFLASKNCIHRDLAARNILLTHG-RITKICDFGLARHIKNDSNYVVKGNAR 231
Query: 197 Y---FKGPELLVDLQDYDYSLDMWSLG 220
+ PE + + Y + D+WS G
Sbjct: 232 LPVKWMAPESIFNCV-YTFESDVWSYG 257
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 81/188 (43%), Gaps = 30/188 (15%)
Query: 94 NVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDY-----------DIRYYIYELL 142
N+VK + + LI EY+ Y +L DY + Y ++
Sbjct: 76 NIVKYKGVCYSAGRRNLKLIMEYLP-------YGSLRDYLQKHKERIDHIKLLQYTSQIC 128
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE-YNVRVASR---YF 198
K ++Y ++ +HRD+ N+++++E R +++ D+GL + KE V+ ++
Sbjct: 129 KGMEYLGTKRYIHRDLATRNILVENENR-VKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 187
Query: 199 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAY 258
PE L + + + D+WS G + E F Y + + +++G D+
Sbjct: 188 YAPESLTE-SKFSVASDVWSFGVVLY------ELFTYIEKSKSPPAEFMRMIGNDKQGQM 240
Query: 259 LNKYHLEL 266
+ + +EL
Sbjct: 241 IVFHLIEL 248
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 80/162 (49%), Gaps = 14/162 (8%)
Query: 139 YELLKALDYCHSQG--IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA-S 195
Y++ K ++Y H++ I+HRD+K N+++D + +++ D+GL+ + A +
Sbjct: 144 YDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKY-TVKVCDFGLSRLKASXFLXSKXAAGT 202
Query: 196 RYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDEL 255
+ PE+L D + S D++S G + + ++P +G+ N Q+V A L
Sbjct: 203 PEWMAPEVLRDEPSNEKS-DVYSFGVILWELATLQQP--WGNLNPAQVVA-AVGFKCKRL 258
Query: 256 NAYLNKYHLELDPQLDALV-GRHSRKPWSKFINADNQHLVSP 296
N L+PQ+ A++ G + +PW + A L+ P
Sbjct: 259 EIPRN-----LNPQVAAIIEGCWTNEPWKRPSFATIMDLLRP 295
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 81/188 (43%), Gaps = 30/188 (15%)
Query: 94 NVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDY-----------DIRYYIYELL 142
N+VK + + LI EY+ Y +L DY + Y ++
Sbjct: 75 NIVKYKGVCYSAGRRNLKLIMEYLP-------YGSLRDYLQKHKERIDHIKLLQYTSQIC 127
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE-YNVRVASR---YF 198
K ++Y ++ +HRD+ N+++++E R +++ D+GL + KE V+ ++
Sbjct: 128 KGMEYLGTKRYIHRDLATRNILVENENR-VKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 186
Query: 199 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAY 258
PE L + + + D+WS G + E F Y + + +++G D+
Sbjct: 187 YAPESLTE-SKFSVASDVWSFGVVLY------ELFTYIEKSKSPPAEFMRMIGNDKQGQM 239
Query: 259 LNKYHLEL 266
+ + +EL
Sbjct: 240 IVFHLIEL 247
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 81/188 (43%), Gaps = 30/188 (15%)
Query: 94 NVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDY-----------DIRYYIYELL 142
N+VK + + LI EY+ Y +L DY + Y ++
Sbjct: 72 NIVKYKGVCYSAGRRNLKLIMEYLP-------YGSLRDYLQKHKERIDHIKLLQYTSQIC 124
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE-YNVRVASR---YF 198
K ++Y ++ +HRD+ N+++++E R +++ D+GL + KE V+ ++
Sbjct: 125 KGMEYLGTKRYIHRDLATRNILVENENR-VKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 183
Query: 199 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAY 258
PE L + + + D+WS G + E F Y + + +++G D+
Sbjct: 184 YAPESLTE-SKFSVASDVWSFGVVLY------ELFTYIEKSKSPPAEFMRMIGNDKQGQM 236
Query: 259 LNKYHLEL 266
+ + +EL
Sbjct: 237 IVFHLIEL 244
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 69/160 (43%), Gaps = 18/160 (11%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELL-------KAL 145
PN+++L +V SK ++ EY+ + L +D ++ + +L+ +
Sbjct: 106 PNIIRLEGVV--TKSKPVMIVTEYMENGSLDSF---LRKHDAQFTVIQLVGMLRGIASGM 160
Query: 146 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH--PGKEYNVRVASRYFK--GP 201
Y G +HRD+ N++I+ L ++ D+GLA P Y R + P
Sbjct: 161 KYLSDMGYVHRDLAARNILINSNL-VCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 202 ELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHD 241
E + + + + D+WS G + ++ E ++ N D
Sbjct: 220 EAIA-YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD 258
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 81/188 (43%), Gaps = 30/188 (15%)
Query: 94 NVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDY-----------DIRYYIYELL 142
N+VK + + LI EY+ Y +L DY + Y ++
Sbjct: 70 NIVKYKGVCYSAGRRNLKLIMEYLP-------YGSLRDYLQKHKERIDHIKLLQYTSQIC 122
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE-YNVRVASR---YF 198
K ++Y ++ +HRD+ N+++++E R +++ D+GL + KE V+ ++
Sbjct: 123 KGMEYLGTKRYIHRDLATRNILVENENR-VKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 181
Query: 199 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAY 258
PE L + + + D+WS G + E F Y + + +++G D+
Sbjct: 182 YAPESLTE-SKFSVASDVWSFGVVLY------ELFTYIEKSKSPPAEFMRMIGNDKQGQM 234
Query: 259 LNKYHLEL 266
+ + +EL
Sbjct: 235 IVFHLIEL 242
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 81/188 (43%), Gaps = 30/188 (15%)
Query: 94 NVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDY-----------DIRYYIYELL 142
N+VK + + LI EY+ Y +L DY + Y ++
Sbjct: 90 NIVKYKGVCYSAGRRNLKLIMEYLP-------YGSLRDYLQKHKERIDHIKLLQYTSQIC 142
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE-YNVRVASR---YF 198
K ++Y ++ +HRD+ N+++++E R +++ D+GL + KE V+ ++
Sbjct: 143 KGMEYLGTKRYIHRDLATRNILVENENR-VKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 201
Query: 199 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAY 258
PE L + + + D+WS G + E F Y + + +++G D+
Sbjct: 202 YAPESLTE-SKFSVASDVWSFGVVLY------ELFTYIEKSKSPPAEFMRMIGNDKQGQM 254
Query: 259 LNKYHLEL 266
+ + +EL
Sbjct: 255 IVFHLIEL 262
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 81/188 (43%), Gaps = 30/188 (15%)
Query: 94 NVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDY-----------DIRYYIYELL 142
N+VK + + LI EY+ Y +L DY + Y ++
Sbjct: 71 NIVKYKGVCYSAGRRNLKLIMEYLP-------YGSLRDYLQKHKERIDHIKLLQYTSQIC 123
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE-YNVRVASR---YF 198
K ++Y ++ +HRD+ N+++++E R +++ D+GL + KE V+ ++
Sbjct: 124 KGMEYLGTKRYIHRDLATRNILVENENR-VKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 182
Query: 199 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAY 258
PE L + + + D+WS G + E F Y + + +++G D+
Sbjct: 183 YAPESLTE-SKFSVASDVWSFGVVLY------ELFTYIEKSKSPPAEFMRMIGNDKQGQM 235
Query: 259 LNKYHLEL 266
+ + +EL
Sbjct: 236 IVFHLIEL 243
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 31/48 (64%), Gaps = 4/48 (8%)
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRK----LRLIDWGLAEFY 183
+L+ ++Y HS+ +++RDVKP N +I K + +ID+GLA+ Y
Sbjct: 113 QLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAKEY 160
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 196
+ Y++ K + + S+ +HRD+ N+++ H R ++ D+GLA Y V+ +R
Sbjct: 150 FSYQVAKGMAFLASKNCIHRDLAARNILLTHG-RITKICDFGLARDIKNDSNYVVKGNAR 208
Query: 197 Y---FKGPELLVDLQDYDYSLDMWSLG 220
+ PE + + Y + D+WS G
Sbjct: 209 LPVKWMAPESIFNCV-YTFESDVWSYG 234
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 196
+ Y++ K + + S+ +HRD+ N+++ H R ++ D+GLA Y V+ +R
Sbjct: 166 FSYQVAKGMAFLASKNCIHRDLAARNILLTHG-RITKICDFGLARDIKNDSNYVVKGNAR 224
Query: 197 Y---FKGPELLVDLQDYDYSLDMWSLG 220
+ PE + + Y + D+WS G
Sbjct: 225 LPVKWMAPESIFNCV-YTFESDVWSYG 250
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 69/160 (43%), Gaps = 18/160 (11%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELL-------KAL 145
PN+++L +V SK ++ EY+ + L +D ++ + +L+ +
Sbjct: 106 PNIIRLEGVV--TKSKPVMIVTEYMENGSLDSF---LRKHDAQFTVIQLVGMLRGIASGM 160
Query: 146 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH--PGKEYNVRVASRYFK--GP 201
Y G +HRD+ N++I+ L ++ D+GL+ P Y R + P
Sbjct: 161 KYLSDMGFVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 202 ELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHD 241
E + + + + D+WS G + ++ E ++ N D
Sbjct: 220 EAIA-YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD 258
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 196
+ Y++ K + + S+ +HRD+ N+++ H R ++ D+GLA Y V+ +R
Sbjct: 168 FSYQVAKGMAFLASKNCIHRDLAARNILLTHG-RITKICDFGLARDIKNDSNYVVKGNAR 226
Query: 197 Y---FKGPELLVDLQDYDYSLDMWSLG 220
+ PE + + Y + D+WS G
Sbjct: 227 LPVKWMAPESIFNCV-YTFESDVWSYG 252
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 69/160 (43%), Gaps = 18/160 (11%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELL-------KAL 145
PN+++L +V SK ++ EY+ + L +D ++ + +L+ +
Sbjct: 77 PNIIRLEGVV--TKSKPVMIVTEYMENGSLDSF---LRKHDAQFTVIQLVGMLRGIASGM 131
Query: 146 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH--PGKEYNVRVASRYFK--GP 201
Y G +HRD+ N++I+ L ++ D+GL+ P Y R + P
Sbjct: 132 KYLSDMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 190
Query: 202 ELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHD 241
E + + + + D+WS G + ++ E ++ N D
Sbjct: 191 EAIA-YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD 229
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 23/132 (17%)
Query: 123 KVLYPTLTDYDI-------RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLI 175
+ LY + D I R E++K + Y H++GI+H+D+K NV D+ K+ +
Sbjct: 114 RTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYDNG--KVVIT 171
Query: 176 DWGL---AEFYHPG-KEYNVRVASRYF--KGPELLVDLQ--------DYDYSLDMWSLGC 221
D+GL + G +E +R+ + + PE++ L + D+++LG
Sbjct: 172 DFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGT 231
Query: 222 MFAGMIFRKEPF 233
++ + R+ PF
Sbjct: 232 IWYELHAREWPF 243
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 196
+ Y++ K + + S+ +HRD+ N+++ H R ++ D+GLA Y V+ +R
Sbjct: 173 FSYQVAKGMAFLASKNCIHRDLAARNILLTHG-RITKICDFGLARDIKNDSNYVVKGNAR 231
Query: 197 Y---FKGPELLVDLQDYDYSLDMWSLG 220
+ PE + + Y + D+WS G
Sbjct: 232 LPVKWMAPESIFNCV-YTFESDVWSYG 257
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 69/160 (43%), Gaps = 18/160 (11%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELL-------KAL 145
PN+++L +V SK ++ EY+ + L +D ++ + +L+ +
Sbjct: 94 PNIIRLEGVV--TKSKPVMIVTEYMENGSLDSF---LRKHDAQFTVIQLVGMLRGIASGM 148
Query: 146 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH--PGKEYNVRVASRYFK--GP 201
Y G +HRD+ N++I+ L ++ D+GL+ P Y R + P
Sbjct: 149 KYLSDMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 207
Query: 202 ELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHD 241
E + + + + D+WS G + ++ E ++ N D
Sbjct: 208 EAIA-YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD 246
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 83/167 (49%), Gaps = 24/167 (14%)
Query: 139 YELLKALDYCHSQG--IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 196
Y++ K ++Y H++ I+HR++K N+++D + +++ D+GL+ + + ++S+
Sbjct: 144 YDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKY-TVKVCDFGLSRL-----KASTFLSSK 197
Query: 197 YFKG------PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVL 250
G PE+L D + S D++S G + + ++P +G+ N Q+V A
Sbjct: 198 SAAGTPEWMAPEVLRDEPSNEKS-DVYSFGVILWELATLQQP--WGNLNPAQVVA-AVGF 253
Query: 251 GTDELNAYLNKYHLELDPQLDALV-GRHSRKPWSKFINADNQHLVSP 296
L N L+PQ+ A++ G + +PW + A L+ P
Sbjct: 254 KCKRLEIPRN-----LNPQVAAIIEGCWTNEPWKRPSFATIMDLLRP 295
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 135/325 (41%), Gaps = 67/325 (20%)
Query: 36 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGGPNV 95
D D+ +++ +GRG+Y V++G + +ER QN N+
Sbjct: 11 DLDNLKLLELIGRGRYGAVYKG---SLDERPVAVKVFSFANR---------QNFINEKNI 58
Query: 96 --VKLLD-------IVRDQHSKTPS-----LIFEY-VNSTDFKVLYPTLTDYDIRYYI-Y 139
V L++ IV D+ L+ EY N + K L +D+ + +
Sbjct: 59 YRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAH 118
Query: 140 ELLKALDYCHSQ---------GIMHRDVKPHNVMIDHELRKLRLIDWGLA------EFYH 184
+ + L Y H++ I HRD+ NV++ ++ + + D+GL+
Sbjct: 119 SVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCV-ISDFGLSMRLTGNRLVR 177
Query: 185 PGKEYNV---RVASRYFKGPELL---VDLQDYDYSL---DMWSLGCMFAGMIFRKEPFFY 235
PG+E N V + + PE+L V+L+D + +L DM++LG ++ + R F
Sbjct: 178 PGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFP 237
Query: 236 GHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVS 295
G + + +G N E + LV R ++P KF A ++ ++
Sbjct: 238 GESVPEYQMAFQTEVG--------NHPTFE---DMQVLVSREKQRP--KFPEAWKENSLA 284
Query: 296 PEAI-DFLDKLLRYDHQDRLTAREA 319
++ + ++ D + RLTA+ A
Sbjct: 285 VRSLKETIEDCWDQDAEARLTAQXA 309
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 72/164 (43%), Gaps = 17/164 (10%)
Query: 93 PNVVKLLDIVRDQHSK---TPSLIFEYVNSTDFK--VLYPTLTDYDIRYYIYELLK---- 143
PNV++LL + + S+ P +I ++ D +LY L + LLK
Sbjct: 96 PNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVD 155
Query: 144 ---ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY-NVRVASRYFK 199
++Y ++ +HRD+ N M+ ++ + + D+GL++ + G Y R+A K
Sbjct: 156 IALGMEYLSNRNFLHRDLAARNCMLRDDM-TVCVADFGLSKKIYSGDYYRQGRIAKMPVK 214
Query: 200 --GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHD 241
E L D + Y D+W+ G + R + G NH+
Sbjct: 215 WIAIESLAD-RVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE 257
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 69/160 (43%), Gaps = 18/160 (11%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELL-------KAL 145
PN+++L +V SK ++ EY+ + L +D ++ + +L+ +
Sbjct: 106 PNIIRLEGVV--TKSKPVMIVTEYMENGSLDSF---LRKHDAQFTVIQLVGMLRGIASGM 160
Query: 146 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH--PGKEYNVRVASRYFK--GP 201
Y G +HRD+ N++I+ L ++ D+GL+ P Y R + P
Sbjct: 161 KYLSDMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 202 ELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHD 241
E + + + + D+WS G + ++ E ++ N D
Sbjct: 220 EAIA-YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD 258
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 69/160 (43%), Gaps = 18/160 (11%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELL-------KAL 145
PN+++L +V SK ++ EY+ + L +D ++ + +L+ +
Sbjct: 106 PNIIRLEGVV--TKSKPVMIVTEYMENGSLDSF---LRKHDAQFTVIQLVGMLRGIASGM 160
Query: 146 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH--PGKEYNVRVASRYFK--GP 201
Y G +HRD+ N++I+ L ++ D+GL+ P Y R + P
Sbjct: 161 KYLSDMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 202 ELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHD 241
E + + + + D+WS G + ++ E ++ N D
Sbjct: 220 EAIA-YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD 258
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 69/160 (43%), Gaps = 18/160 (11%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELL-------KAL 145
PN+++L +V SK ++ EY+ + L +D ++ + +L+ +
Sbjct: 106 PNIIRLEGVV--TKSKPVMIVTEYMENGSLDSF---LRKHDAQFTVIQLVGMLRGIASGM 160
Query: 146 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH--PGKEYNVRVASRYFK--GP 201
Y G +HRD+ N++I+ L ++ D+GL+ P Y R + P
Sbjct: 161 KYLSDMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 202 ELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHD 241
E + + + + D+WS G + ++ E ++ N D
Sbjct: 220 EAIA-YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD 258
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 69/160 (43%), Gaps = 18/160 (11%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELL-------KAL 145
PN+++L +V SK ++ EY+ + L +D ++ + +L+ +
Sbjct: 104 PNIIRLEGVV--TKSKPVMIVTEYMENGSLDSF---LRKHDAQFTVIQLVGMLRGIASGM 158
Query: 146 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH--PGKEYNVRVASRYFK--GP 201
Y G +HRD+ N++I+ L ++ D+GL+ P Y R + P
Sbjct: 159 KYLSDMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 217
Query: 202 ELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHD 241
E + + + + D+WS G + ++ E ++ N D
Sbjct: 218 EAIA-YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD 256
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 50/105 (47%), Gaps = 5/105 (4%)
Query: 122 FKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE 181
F + TL+ D+ ++ ++ + + + S+ +HRDV NV++ + ++ D+GLA
Sbjct: 154 FAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNG-HVAKIGDFGLAR 212
Query: 182 FYHPGKEYNVRVASRY---FKGPELLVDLQDYDYSLDMWSLGCMF 223
Y V+ +R + PE + D Y D+WS G +
Sbjct: 213 DIMNDSNYIVKGNARLPVKWMAPESIFDCV-YTVQSDVWSYGILL 256
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 69/160 (43%), Gaps = 18/160 (11%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELL-------KAL 145
PN+++L +V SK ++ EY+ + L +D ++ + +L+ +
Sbjct: 106 PNIIRLEGVV--TKSKPVMIVTEYMENGSLDSF---LRKHDAQFTVIQLVGMLRGIASGM 160
Query: 146 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH--PGKEYNVRVASRYFK--GP 201
Y G +HRD+ N++I+ L ++ D+GL+ P Y R + P
Sbjct: 161 KYLSDMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 202 ELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHD 241
E + + + + D+WS G + ++ E ++ N D
Sbjct: 220 EAIA-YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD 258
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 65/156 (41%), Gaps = 16/156 (10%)
Query: 39 DYEVVRKVGRGKYSEVFEGINVNTNE----RCXXXXXXXXXXXXXXXXXXXLQNLCGGPN 94
++ V +K+G G + E+ G N+ TNE + L G P
Sbjct: 5 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLSATEGVPQ 64
Query: 95 VVKLLDIVRDQHSKTPSLIFEYVNSTD---FKVLYPTLTDYDIRYYIYELLKALDYCHSQ 151
V K +++ E + + F + T T + +L+ ++Y H++
Sbjct: 65 VYYF-----GPXGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLITRMEYVHTK 119
Query: 152 GIMHRDVKPHNVMIDHELRK----LRLIDWGLAEFY 183
+++RDVKP N ++ K + +ID+GLA+ Y
Sbjct: 120 SLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAKEY 155
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 64/134 (47%), Gaps = 12/134 (8%)
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE-YNVRVAS 195
Y ++ K ++Y ++ +HRD+ N+++++E R +++ D+GL + KE V+
Sbjct: 122 YTSQICKGMEYLGTKRYIHRDLATRNILVENENR-VKIGDFGLTKVLPQDKEXXKVKEPG 180
Query: 196 R---YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 252
++ PE L + + + D+WS G + E F Y + + +++G
Sbjct: 181 ESPIFWYAPESLTE-SKFSVASDVWSFGVVLY------ELFTYIEKSKSPPAEFMRMIGN 233
Query: 253 DELNAYLNKYHLEL 266
D+ + + +EL
Sbjct: 234 DKQGQMIVFHLIEL 247
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 63/134 (47%), Gaps = 10/134 (7%)
Query: 95 VVKLLDIVRDQHSKTPSLIFEYVNST---DFKVLYPTLTDYD-IRYYIYELLKALDYCHS 150
+VK + ++ L+ EY+ S DF + D + Y ++ K ++Y S
Sbjct: 86 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS 145
Query: 151 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV----RVASRYFKGPELLVD 206
+ +HRD+ N++++ E +++ D+GLA+ K+Y V + ++ PE L D
Sbjct: 146 RRCVHRDLAARNILVESEAH-VKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSD 204
Query: 207 LQDYDYSLDMWSLG 220
+ D+WS G
Sbjct: 205 -NIFSRQSDVWSFG 217
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 68/160 (42%), Gaps = 18/160 (11%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELL-------KAL 145
PN+++L +V SK ++ EY+ + L +D ++ + +L+ +
Sbjct: 106 PNIIRLEGVV--TKSKPVMIVTEYMENGSLDSF---LRKHDAQFTVIQLVGMLRGIASGM 160
Query: 146 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH--PGKEYNVRVASRYFK--GP 201
Y G +HRD+ N++I+ L ++ D+GL P Y R + P
Sbjct: 161 KYLSDMGYVHRDLAARNILINSNL-VCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 202 ELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHD 241
E + + + + D+WS G + ++ E ++ N D
Sbjct: 220 EAIA-YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD 258
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 63/134 (47%), Gaps = 10/134 (7%)
Query: 95 VVKLLDIVRDQHSKTPSLIFEYVNST---DFKVLYPTLTDYD-IRYYIYELLKALDYCHS 150
+VK + ++ L+ EY+ S DF + D + Y ++ K ++Y S
Sbjct: 74 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS 133
Query: 151 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV----RVASRYFKGPELLVD 206
+ +HRD+ N++++ E +++ D+GLA+ K+Y V + ++ PE L D
Sbjct: 134 RRCVHRDLAARNILVESEAH-VKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSD 192
Query: 207 LQDYDYSLDMWSLG 220
+ D+WS G
Sbjct: 193 -NIFSRQSDVWSFG 205
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV----R 192
Y ++ K ++Y S+ +HRD+ N++++ E +++ D+GLA+ K+Y V
Sbjct: 119 YSSQICKGMEYLGSRRCVHRDLAARNILVESEAH-VKIADFGLAKLLPLDKDYYVVREPG 177
Query: 193 VASRYFKGPELLVDLQDYDYSLDMWSLG 220
+ ++ PE L D + D+WS G
Sbjct: 178 QSPIFWYAPESLSD-NIFSRQSDVWSFG 204
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 94/224 (41%), Gaps = 32/224 (14%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELL-------KAL 145
PN+++L +V + ++ EY+ + L +D ++ I +L+ +
Sbjct: 110 PNIIRLEGVV--TRGRLAMIVTEYMENGSLDTF---LRTHDGQFTIMQLVGMLRGVGAGM 164
Query: 146 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGL---------AEFYHPGKEYNVRVASR 196
Y G +HRD+ NV++D L ++ D+GL A G + +R
Sbjct: 165 RYLSDLGYVHRDLAARNVLVDSNL-VCKVSDFGLSRVLEDDPDAAXTTTGGKIPIR---- 219
Query: 197 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELN 256
+ PE + + + + D+WS G + ++ E ++ N D I+ V L
Sbjct: 220 -WTAPEAIA-FRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD---VISSVEEGYRLP 274
Query: 257 AYLNKYHLELDPQLDALVGRHSRKP-WSKFINADNQHLVSPEAI 299
A + H LD +++P +S+ ++ + + SPE++
Sbjct: 275 APMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPESL 318
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 48/98 (48%), Gaps = 3/98 (3%)
Query: 128 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 187
LT D+ + +++ + + Y ++HRD+ N+++ E RK+++ D+GL+ +
Sbjct: 146 ALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILV-AEGRKMKISDFGLSRDVYEED 204
Query: 188 EYNVRVASRYFKGPELLVDLQDYDYSL--DMWSLGCMF 223
Y R R + L D+ Y+ D+WS G +
Sbjct: 205 SYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLL 242
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 196
Y +++ K +++ S+ +HRD+ N+++ E +++ D+GLA + +Y + +R
Sbjct: 196 YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDAR 254
Query: 197 Y---FKGPELLVDLQDYDYSLDMWSLGCMF 223
+ PE + D + Y D+WS G +
Sbjct: 255 LPLKWMAPETIFD-RVYTIQSDVWSFGVLL 283
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 196
Y +++ K +++ S+ +HRD+ N+++ E +++ D+GLA + +Y + +R
Sbjct: 198 YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDAR 256
Query: 197 Y---FKGPELLVDLQDYDYSLDMWSLGCMF 223
+ PE + D + Y D+WS G +
Sbjct: 257 LPLKWMAPETIFD-RVYTIQSDVWSFGVLL 285
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 188
+T D+ Y +++ + +++ S+ +HRD+ N+++ E +++ D+GLA + +
Sbjct: 196 ITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILL-SENNVVKICDFGLARDIYKNPD 254
Query: 189 YNVRVASRY---FKGPELLVDLQDYDYSLDMWSLGCMF 223
Y + +R + PE + D + Y D+WS G +
Sbjct: 255 YVRKGDTRLPLKWMAPESIFD-KIYSTKSDVWSYGVLL 291
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 196
Y +++ K +++ S+ +HRD+ N+++ E +++ D+GLA + +Y + +R
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 197 Y---FKGPELLVDLQDYDYSLDMWSLGCMF 223
+ PE + D + Y D+WS G +
Sbjct: 203 LPLKWMAPETIFD-RVYTIQSDVWSFGVLL 231
>pdb|4AX8|A Chain A, Medium Resolution Structure Of The Bifunctional Kinase-
Methyltransferase Wbdd
Length = 569
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 101 IVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKP 160
+ +++++ L+ E + + + D + LL++L QG H DV+P
Sbjct: 308 LAHGENAQSGWLVMEKLPGRLLSDMLAAGEEIDREKILGSLLRSLAALEKQGFWHDDVRP 367
Query: 161 HNVMIDHELRKLRLIDWG 178
NVM+D + RLID+G
Sbjct: 368 WNVMVDAR-QHARLIDFG 384
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 196
Y +++ K +++ S+ +HRD+ N+++ E +++ D+GLA + +Y + +R
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 197 Y---FKGPELLVDLQDYDYSLDMWSLGCMF 223
+ PE + D + Y D+WS G +
Sbjct: 203 LPLKWMAPETIFD-RVYTIQSDVWSFGVLL 231
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 196
Y +++ K +++ S+ +HRD+ N+++ E +++ D+GLA + +Y + +R
Sbjct: 203 YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDAR 261
Query: 197 Y---FKGPELLVDLQDYDYSLDMWSLGCMF 223
+ PE + D + Y D+WS G +
Sbjct: 262 LPLKWMAPETIFD-RVYTIQSDVWSFGVLL 290
>pdb|4AZS|A Chain A, High Resolution (2.2 A) Crystal Structure Of Wbdd.
pdb|4AZT|A Chain A, Co-Crystal Structure Of Wbdd And Kinase Inhibitor
Ly294002.
pdb|4AZV|A Chain A, Co-crystal Structure Of Wbdd And Kinase Inhibitor
Gw435821x
Length = 569
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 101 IVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKP 160
+ +++++ L+ E + + + D + LL++L QG H DV+P
Sbjct: 308 LAHGENAQSGWLVMEKLPGRLLSDMLAAGEEIDREKILGSLLRSLAALEKQGFWHDDVRP 367
Query: 161 HNVMIDHELRKLRLIDWG 178
NVM+D + RLID+G
Sbjct: 368 WNVMVDAR-QHARLIDFG 384
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 196
Y +++ K +++ S+ +HRD+ N+++ E +++ D+GLA + +Y + +R
Sbjct: 190 YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDAR 248
Query: 197 Y---FKGPELLVDLQDYDYSLDMWSLGCMF 223
+ PE + D + Y D+WS G +
Sbjct: 249 LPLKWMAPETIFD-RVYTIQSDVWSFGVLL 277
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 196
Y +++ K +++ S+ +HRD+ N+++ E +++ D+GLA + +Y + +R
Sbjct: 205 YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDAR 263
Query: 197 Y---FKGPELLVDLQDYDYSLDMWSLGCMF 223
+ PE + D + Y D+WS G +
Sbjct: 264 LPLKWMAPETIFD-RVYTIQSDVWSFGVLL 292
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 196
Y +++ K +++ S+ +HRD+ N+++ E +++ D+GLA + +Y + +R
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDAR 211
Query: 197 Y---FKGPELLVDLQDYDYSLDMWSLGCMF 223
+ PE + D + Y D+WS G +
Sbjct: 212 LPLKWMAPETIFD-RVYTIQSDVWSFGVLL 240
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 77/204 (37%), Gaps = 26/204 (12%)
Query: 36 DQDDYEVVRKVGRGKYSEVFEGINVNTN-----ERCXXXXXXXXXXXXXXXXXXXLQNLC 90
+ +D + ++GRG + EVF G N + C Q
Sbjct: 112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQY-- 169
Query: 91 GGPNVVKLLDIVRDQHSKTPS-LIFEYVNSTDFKVLYPTLTDYDIRYYIYELLK------ 143
PN+V+L+ + K P ++ E V DF L R + LL+
Sbjct: 170 SHPNIVRLIGVCTQ---KQPIYIVMELVQGGDFLTF---LRTEGARLRVKTLLQMVGDAA 223
Query: 144 -ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPG---KEYNVRVASRYFK 199
++Y S+ +HRD+ N ++ E L++ D+G++ G +R +
Sbjct: 224 AGMEYLESKCCIHRDLAARNCLVT-EKNVLKISDFGMSREEADGVXAASGGLRQVPVKWT 282
Query: 200 GPELLVDLQDYDYSLDMWSLGCMF 223
PE L + Y D+WS G +
Sbjct: 283 APEAL-NYGRYSSESDVWSFGILL 305
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 196
Y +++ K +++ S+ +HRD+ N+++ E +++ D+GLA + +Y + +R
Sbjct: 155 YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDAR 213
Query: 197 Y---FKGPELLVDLQDYDYSLDMWSLGCMF 223
+ PE + D + Y D+WS G +
Sbjct: 214 LPLKWMAPETIFD-RVYTIQSDVWSFGVLL 242
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 77/204 (37%), Gaps = 26/204 (12%)
Query: 36 DQDDYEVVRKVGRGKYSEVFEGINVNTN-----ERCXXXXXXXXXXXXXXXXXXXLQNLC 90
+ +D + ++GRG + EVF G N + C Q
Sbjct: 112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQY-- 169
Query: 91 GGPNVVKLLDIVRDQHSKTPS-LIFEYVNSTDFKVLYPTLTDYDIRYYIYELLK------ 143
PN+V+L+ + K P ++ E V DF L R + LL+
Sbjct: 170 SHPNIVRLIGVCTQ---KQPIYIVMELVQGGDFLTF---LRTEGARLRVKTLLQMVGDAA 223
Query: 144 -ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPG---KEYNVRVASRYFK 199
++Y S+ +HRD+ N ++ E L++ D+G++ G +R +
Sbjct: 224 AGMEYLESKCCIHRDLAARNCLVT-EKNVLKISDFGMSREEADGVYAASGGLRQVPVKWT 282
Query: 200 GPELLVDLQDYDYSLDMWSLGCMF 223
PE L + Y D+WS G +
Sbjct: 283 APEAL-NYGRYSSESDVWSFGILL 305
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 196
Y +++ K +++ S+ +HRD+ N+++ E +++ D+GLA + +Y + +R
Sbjct: 149 YSFQVAKGMEFLASRKXIHRDLAARNILLS-EKNVVKIXDFGLARDIYKDPDYVRKGDAR 207
Query: 197 Y---FKGPELLVDLQDYDYSLDMWSLGCMF 223
+ PE + D + Y D+WS G +
Sbjct: 208 LPLKWMAPETIFD-RVYTIQSDVWSFGVLL 236
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 196
Y +++ K +++ S+ +HRD+ N+++ E +++ D+GLA + +Y + +R
Sbjct: 149 YSFQVAKGMEFLASRKXIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDAR 207
Query: 197 Y---FKGPELLVDLQDYDYSLDMWSLGCMF 223
+ PE + D + Y D+WS G +
Sbjct: 208 LPLKWMAPETIFD-RVYTIQSDVWSFGVLL 236
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 67/160 (41%), Gaps = 18/160 (11%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELL-------KAL 145
PN++ L +V SK ++ EY+ + L D ++ + +L+ +
Sbjct: 83 PNIIHLEGVV--TKSKPVMIVTEYMENGSLDTF---LKKNDGQFTVIQLVGMLRGISAGM 137
Query: 146 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH--PGKEYNVRVASRYFK--GP 201
Y G +HRD+ N++I+ L ++ D+GL+ P Y R + P
Sbjct: 138 KYLSDMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAP 196
Query: 202 ELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHD 241
E + + + + D+WS G + ++ E ++ N D
Sbjct: 197 EAIA-FRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQD 235
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 4/48 (8%)
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRK----LRLIDWGLAEFY 183
+L+ ++Y HS+ +++RDVKP N +I K + +ID+ LA+ Y
Sbjct: 134 QLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEY 181
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 4/48 (8%)
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRK----LRLIDWGLAEFY 183
+L+ ++Y HS+ +++RDVKP N +I K + +ID+ LA+ Y
Sbjct: 113 QLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEY 160
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 56/101 (55%), Gaps = 10/101 (9%)
Query: 88 NLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKV-LY----PTLT-DYDIRYYI-YE 140
+ C P++V L+ +++ LI++Y+ + + K LY PT++ ++ R I
Sbjct: 90 SFCRHPHLVSLIGFCDERNEMI--LIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 141 LLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE 181
+ L Y H++ I+HRDVK N+++D ++ D+G+++
Sbjct: 148 AARGLHYLHTRAIIHRDVKSINILLDENFVP-KITDFGISK 187
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 59/131 (45%), Gaps = 17/131 (12%)
Query: 98 LLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRD 157
LLD +R F NST TL+ + ++ ++ + +DY + +HRD
Sbjct: 113 LLDFLRKSRVLETDPAFAIANSTA-----STLSSQQLLHFAADVARGMDYLSQKQFIHRD 167
Query: 158 VKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSL--- 214
+ N+++ E ++ D+GL+ G+E V V + P + ++ +YS+
Sbjct: 168 LAARNILVG-ENYVAKIADFGLSR----GQE--VYVKKTMGRLPVRWMAIESLNYSVYTT 220
Query: 215 --DMWSLGCMF 223
D+WS G +
Sbjct: 221 NSDVWSYGVLL 231
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 52/107 (48%), Gaps = 3/107 (2%)
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 196
++ ++ ++Y S+ +HRD+ N M+ ++ + + D+GL+ + G Y AS+
Sbjct: 142 FMVDIACGMEYLSSRNFIHRDLAARNCMLAEDM-TVCVADFGLSRKIYSGDYYRQGCASK 200
Query: 197 YFKGPELLVDLQDYDYSL--DMWSLGCMFAGMIFRKEPFFYGHDNHD 241
L L D Y++ D+W+ G ++ R + + G +N +
Sbjct: 201 LPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE 247
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 35.8 bits (81), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 59/131 (45%), Gaps = 17/131 (12%)
Query: 98 LLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRD 157
LLD +R F NST TL+ + ++ ++ + +DY + +HRD
Sbjct: 103 LLDFLRKSRVLETDPAFAIANSTA-----STLSSQQLLHFAADVARGMDYLSQKQFIHRD 157
Query: 158 VKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSL--- 214
+ N+++ E ++ D+GL+ G+E V V + P + ++ +YS+
Sbjct: 158 LAARNILVG-ENYVAKIADFGLSR----GQE--VYVKKTMGRLPVRWMAIESLNYSVYTT 210
Query: 215 --DMWSLGCMF 223
D+WS G +
Sbjct: 211 NSDVWSYGVLL 221
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 56/101 (55%), Gaps = 10/101 (9%)
Query: 88 NLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKV-LY----PTLT-DYDIRYYI-YE 140
+ C P++V L+ +++ LI++Y+ + + K LY PT++ ++ R I
Sbjct: 90 SFCRHPHLVSLIGFCDERNEMI--LIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 141 LLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE 181
+ L Y H++ I+HRDVK N+++D ++ D+G+++
Sbjct: 148 AARGLHYLHTRAIIHRDVKSINILLDENFVP-KITDFGISK 187
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 68/160 (42%), Gaps = 18/160 (11%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELL-------KAL 145
PN+++L +V SK ++ E + + L +D ++ + +L+ +
Sbjct: 106 PNIIRLEGVV--TKSKPVMIVTEXMENGSLDSF---LRKHDAQFTVIQLVGMLRGIASGM 160
Query: 146 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH--PGKEYNVRVASRYFK--GP 201
Y G +HRD+ N++I+ L ++ D+GL+ P Y R + P
Sbjct: 161 KYLSDMGAVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 202 ELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHD 241
E + + + + D+WS G + ++ E ++ N D
Sbjct: 220 EAIA-YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD 258
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 49/105 (46%), Gaps = 5/105 (4%)
Query: 122 FKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE 181
F + T + D+ ++ ++ + + + S+ +HRDV NV++ + ++ D+GLA
Sbjct: 154 FAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNG-HVAKIGDFGLAR 212
Query: 182 FYHPGKEYNVRVASRY---FKGPELLVDLQDYDYSLDMWSLGCMF 223
Y V+ +R + PE + D Y D+WS G +
Sbjct: 213 DIMNDSNYIVKGNARLPVKWMAPESIFDCV-YTVQSDVWSYGILL 256
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 35.4 bits (80), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV----R 192
Y ++ K ++Y S+ +HRD+ N++++ E +++ D+GLA+ K+ V
Sbjct: 116 YSSQICKGMEYLGSRRCVHRDLAARNILVESEAH-VKIADFGLAKLLPLDKDXXVVREPG 174
Query: 193 VASRYFKGPELLVDLQDYDYSLDMWSLG 220
+ ++ PE L D + D+WS G
Sbjct: 175 QSPIFWYAPESLSD-NIFSRQSDVWSFG 201
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 35.4 bits (80), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/134 (20%), Positives = 58/134 (43%), Gaps = 27/134 (20%)
Query: 98 LLDIVR-DQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHR 156
LLD ++ D+ SK P P L D+ ++ + + + + +HR
Sbjct: 96 LLDFLKSDEGSKQP---------------LPKLIDFSA-----QIAEGMAFIEQRNYIHR 135
Query: 157 DVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY---FKGPELLVDLQDYDYS 213
D++ N+++ L ++ D+GLA EY R +++ + PE ++ +
Sbjct: 136 DLRAANILVSASL-VCKIADFGLARVIE-DNEYTAREGAKFPIKWTAPE-AINFGSFTIK 192
Query: 214 LDMWSLGCMFAGMI 227
D+WS G + ++
Sbjct: 193 SDVWSFGILLMEIV 206
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 35.4 bits (80), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 68/160 (42%), Gaps = 18/160 (11%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELL-------KAL 145
PN+++L +V SK ++ E + + L +D ++ + +L+ +
Sbjct: 77 PNIIRLEGVV--TKSKPVMIVTEXMENGSLDSF---LRKHDAQFTVIQLVGMLRGIASGM 131
Query: 146 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH--PGKEYNVRVASRYFK--GP 201
Y G +HRD+ N++I+ L ++ D+GL+ P Y R + P
Sbjct: 132 KYLSDMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 190
Query: 202 ELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHD 241
E + + + + D+WS G + ++ E ++ N D
Sbjct: 191 EAIA-YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD 229
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 35.4 bits (80), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 34/169 (20%), Positives = 70/169 (41%), Gaps = 30/169 (17%)
Query: 38 DDYEVVRKVGRGKYSEVFEGINVNTNE----RCXXXXXXXXXXXXXXXXXXXLQNLCGGP 93
+ Y + RK+G G + +++ G N+ + E + +Q G P
Sbjct: 9 NKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQGGVGIP 68
Query: 94 NVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTD--------YDIRYYIY---ELL 142
++ K D N ++L P+L D + ++ + +++
Sbjct: 69 SI-KWCGAEGD------------YNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMI 115
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLAEFYHPGKEY 189
++Y HS+ +HRDVKP N ++ + + +ID+GLA+ Y + +
Sbjct: 116 SRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH 164
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 40/206 (19%), Positives = 80/206 (38%), Gaps = 32/206 (15%)
Query: 36 DQDDYEVVRKVGRGKYSEVFEGI-NVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGGPN 94
++ D + K+G G+Y EV+EG+ + + PN
Sbjct: 16 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 75
Query: 95 VVKLLDIVRDQHSKTPS--LIFEYVNSTDFKVLYPTLTDY------------DIRYYIYE 140
+V+LL + ++ P +I E++ Y L DY + Y +
Sbjct: 76 LVQLLGVC----TREPPFYIIIEFMT-------YGNLLDYLRECNRQEVNAVVLLYMATQ 124
Query: 141 LLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY--- 197
+ A++Y + +HRD+ N ++ E +++ D+GL+ G Y +++
Sbjct: 125 ISSAMEYLEKKNFIHRDLAARNCLVG-ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIK 182
Query: 198 FKGPELLVDLQDYDYSLDMWSLGCMF 223
+ PE L + D+W+ G +
Sbjct: 183 WTAPESLA-YNKFSIKSDVWAFGVLL 207
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 35.0 bits (79), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLAEFYHPGKEYN 190
+++ ++Y HS+ +HRDVKP N ++ + + +ID+GLA+ Y + +
Sbjct: 113 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQ 165
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 35.0 bits (79), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 66/144 (45%), Gaps = 18/144 (12%)
Query: 91 GGPNVV--------KLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELL 142
GGP +V LL+ +R + + P L + Y S + + L+ D+ ++ ++
Sbjct: 122 GGPVLVITEYCCYGDLLNFLRRK--RPPGLEYSYNPSHNPE---EQLSSRDLLHFSSQVA 176
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY---FK 199
+ + + S+ +HRDV NV++ + ++ D+GLA Y V+ +R +
Sbjct: 177 QGMAFLASKNCIHRDVAARNVLLTNG-HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWM 235
Query: 200 GPELLVDLQDYDYSLDMWSLGCMF 223
PE + D Y D+WS G +
Sbjct: 236 APESIFDCV-YTVQSDVWSYGILL 258
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 35.0 bits (79), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 40/206 (19%), Positives = 80/206 (38%), Gaps = 32/206 (15%)
Query: 36 DQDDYEVVRKVGRGKYSEVFEGI-NVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGGPN 94
++ D + K+G G+Y EV+EG+ + + PN
Sbjct: 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 70
Query: 95 VVKLLDIVRDQHSKTPS--LIFEYVNSTDFKVLYPTLTDY------------DIRYYIYE 140
+V+LL + ++ P +I E++ Y L DY + Y +
Sbjct: 71 LVQLLGVC----TREPPFYIIIEFMT-------YGNLLDYLRECNRQEVSAVVLLYMATQ 119
Query: 141 LLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY--- 197
+ A++Y + +HRD+ N ++ E +++ D+GL+ G Y +++
Sbjct: 120 ISSAMEYLEKKNFIHRDLAARNCLVG-ENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIK 177
Query: 198 FKGPELLVDLQDYDYSLDMWSLGCMF 223
+ PE L + D+W+ G +
Sbjct: 178 WTAPESLA-YNKFSIKSDVWAFGVLL 202
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 35.0 bits (79), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLAEFYHPGKEYN 190
+++ ++Y HS+ +HRDVKP N ++ + + +ID+GLA+ Y + +
Sbjct: 111 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQ 163
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 35.0 bits (79), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Query: 128 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 187
LT D+ + +++ + + Y ++HRD+ N+++ E RK+++ D+GL+ +
Sbjct: 146 ALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILV-AEGRKMKISDFGLSRDVYEED 204
Query: 188 EYNVRVASRYFKGPELLVDLQDYDYSL--DMWSLGCMF 223
R R + L D+ Y+ D+WS G +
Sbjct: 205 SXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLL 242
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 35.0 bits (79), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 37/195 (18%), Positives = 78/195 (40%), Gaps = 10/195 (5%)
Query: 36 DQDDYEVVRKVGRGKYSEVFEGI-NVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGGPN 94
++ D + K+G G+Y EV+EG+ + + PN
Sbjct: 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 70
Query: 95 VVKLLDI-VRDQHSKTPSLIFEYVNSTDF--KVLYPTLTDYDIRYYIYELLKALDYCHSQ 151
+V+LL + R+ + Y N D+ + ++ + Y ++ A++Y +
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 152 GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY---FKGPELLVDLQ 208
+HRD+ N ++ E +++ D+GL+ G Y +++ + PE L
Sbjct: 131 NFIHRDLAARNCLVG-ENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA-YN 187
Query: 209 DYDYSLDMWSLGCMF 223
+ D+W+ G +
Sbjct: 188 KFSIKSDVWAFGVLL 202
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 35.0 bits (79), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 40/206 (19%), Positives = 80/206 (38%), Gaps = 32/206 (15%)
Query: 36 DQDDYEVVRKVGRGKYSEVFEGI-NVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGGPN 94
++ D + K+G G+Y EV+EG+ + + PN
Sbjct: 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 70
Query: 95 VVKLLDIVRDQHSKTPS--LIFEYVNSTDFKVLYPTLTDY------------DIRYYIYE 140
+V+LL + ++ P +I E++ Y L DY + Y +
Sbjct: 71 LVQLLGVC----TREPPFYIIIEFMT-------YGNLLDYLRECNRQEVSAVVLLYMATQ 119
Query: 141 LLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY--- 197
+ A++Y + +HRD+ N ++ E +++ D+GL+ G Y +++
Sbjct: 120 ISSAMEYLEKKNFIHRDLAARNCLVG-ENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIK 177
Query: 198 FKGPELLVDLQDYDYSLDMWSLGCMF 223
+ PE L + D+W+ G +
Sbjct: 178 WTAPESLA-YNKFSIKSDVWAFGVLL 202
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 35.0 bits (79), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 20/105 (19%), Positives = 48/105 (45%), Gaps = 6/105 (5%)
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 197
++ + + + + +HRD++ N+++ L ++ D+GLA EY R +++
Sbjct: 112 QIAEGMAFIEERNYIHRDLRAANILVSDTL-SCKIADFGLARLIE-DNEYTAREGAKFPI 169
Query: 198 -FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHD 241
+ PE ++ + D+WS G + ++ + G N +
Sbjct: 170 KWTAPE-AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE 213
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 35.0 bits (79), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 37/195 (18%), Positives = 78/195 (40%), Gaps = 10/195 (5%)
Query: 36 DQDDYEVVRKVGRGKYSEVFEGI-NVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGGPN 94
++ D + K+G G+Y EV+EG+ + + PN
Sbjct: 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 70
Query: 95 VVKLLDI-VRDQHSKTPSLIFEYVNSTDF--KVLYPTLTDYDIRYYIYELLKALDYCHSQ 151
+V+LL + R+ + Y N D+ + ++ + Y ++ A++Y +
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 152 GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY---FKGPELLVDLQ 208
+HRD+ N ++ E +++ D+GL+ G Y +++ + PE L
Sbjct: 131 NFIHRDLAARNCLVG-ENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA-YN 187
Query: 209 DYDYSLDMWSLGCMF 223
+ D+W+ G +
Sbjct: 188 KFSIKSDVWAFGVLL 202
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 35.0 bits (79), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 96/241 (39%), Gaps = 39/241 (16%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELL-------KAL 145
PN++ L +V K +I EY+ + L D R+ + +L+ +
Sbjct: 90 PNIIHLEGVV--TKCKPVMIITEYMENGSLDAF---LRKNDGRFTVIQLVGMLRGIGSGM 144
Query: 146 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH--PGKEYNVRVASRYFK--GP 201
Y +HRD+ N++++ L ++ D+G++ P Y R + P
Sbjct: 145 KYLSDMSAVHRDLAARNILVNSNL-VCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAP 203
Query: 202 ELLVDLQDYDYSLDMWSLG-CMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLN 260
E + + + + D+WS G M+ M + + P++ D +Q D + A
Sbjct: 204 EAIA-YRKFTSASDVWSYGIVMWEVMSYGERPYW---DMSNQ----------DVIKAIEE 249
Query: 261 KYHLELDPQLDALVGRHS--RKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTARE 318
Y L P +D + H W K +D + ++ LDKL+R + + T E
Sbjct: 250 GYRLP--PPMDCPIALHQLMLDCWQKE-RSDRPKF--GQIVNMLDKLIRNPNSLKRTGSE 304
Query: 319 A 319
+
Sbjct: 305 S 305
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 35.0 bits (79), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 28/134 (20%), Positives = 58/134 (43%), Gaps = 27/134 (20%)
Query: 98 LLDIVR-DQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHR 156
LLD ++ D+ SK P P L D+ ++ + + + + +HR
Sbjct: 269 LLDFLKSDEGSKQP---------------LPKLIDFSA-----QIAEGMAFIEQRNYIHR 308
Query: 157 DVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY---FKGPELLVDLQDYDYS 213
D++ N+++ L ++ D+GLA EY R +++ + PE ++ +
Sbjct: 309 DLRAANILVSASL-VCKIADFGLARVIE-DNEYTAREGAKFPIKWTAPE-AINFGSFTIK 365
Query: 214 LDMWSLGCMFAGMI 227
D+WS G + ++
Sbjct: 366 SDVWSFGILLMEIV 379
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 35.0 bits (79), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 68/160 (42%), Gaps = 18/160 (11%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELL-------KAL 145
PN+++L +V SK ++ E + + L +D ++ + +L+ +
Sbjct: 106 PNIIRLEGVV--TKSKPVMIVTEXMENGSLDSF---LRKHDAQFTVIQLVGMLRGIASGM 160
Query: 146 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH--PGKEYNVRVASRYFK--GP 201
Y G +HRD+ N++I+ L ++ D+GL+ P Y R + P
Sbjct: 161 KYLSDMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 202 ELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHD 241
E + + + + D+WS G + ++ E ++ N D
Sbjct: 220 EAIA-YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD 258
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 35.0 bits (79), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 37/195 (18%), Positives = 78/195 (40%), Gaps = 10/195 (5%)
Query: 36 DQDDYEVVRKVGRGKYSEVFEGI-NVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGGPN 94
++ D + K+G G+Y EV+EG+ + + PN
Sbjct: 16 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 75
Query: 95 VVKLLDI-VRDQHSKTPSLIFEYVNSTDF--KVLYPTLTDYDIRYYIYELLKALDYCHSQ 151
+V+LL + R+ + Y N D+ + ++ + Y ++ A++Y +
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 135
Query: 152 GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY---FKGPELLVDLQ 208
+HRD+ N ++ E +++ D+GL+ G Y +++ + PE L
Sbjct: 136 NFIHRDLAARNCLVG-ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLA-YN 192
Query: 209 DYDYSLDMWSLGCMF 223
+ D+W+ G +
Sbjct: 193 KFSIKSDVWAFGVLL 207
>pdb|4AZW|A Chain A, Crystal Structure Of Monomeric Wbdd
Length = 471
Score = 34.7 bits (78), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 101 IVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKP 160
+ +++++ L+ E + + + D + LL++L +G H DV+P
Sbjct: 308 LAHGENAQSGWLVMEKLPGRLLSDMLAAGEEIDREKILGSLLRSLAALEKKGFWHDDVRP 367
Query: 161 HNVMIDHELRKLRLIDWG 178
NVM+D + RLID+G
Sbjct: 368 WNVMVDAR-QHARLIDFG 384
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 34.7 bits (78), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 20/105 (19%), Positives = 48/105 (45%), Gaps = 6/105 (5%)
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 197
++ + + + + +HRD++ N+++ L ++ D+GLA EY R +++
Sbjct: 123 QIAEGMAFIEERNYIHRDLRAANILVSDTL-SCKIADFGLARLIE-DNEYTAREGAKFPI 180
Query: 198 -FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHD 241
+ PE ++ + D+WS G + ++ + G N +
Sbjct: 181 KWTAPE-AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE 224
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 34.7 bits (78), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 79/204 (38%), Gaps = 28/204 (13%)
Query: 36 DQDDYEVVRKVGRGKYSEVFEGI-NVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGGPN 94
++ D + K+G G+Y EV+EG+ + + PN
Sbjct: 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 70
Query: 95 VVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDY------------DIRYYIYELL 142
+V+LL + + P I T+F + Y L DY + Y ++
Sbjct: 71 LVQLLGVCTRE---PPFYII-----TEF-MTYGNLLDYLRECNRQEVNAVVLLYMATQIS 121
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY---FK 199
A++Y + +HRD+ N ++ E +++ D+GL+ G Y +++ +
Sbjct: 122 SAMEYLEKKNFIHRDLAARNCLVG-ENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWT 179
Query: 200 GPELLVDLQDYDYSLDMWSLGCMF 223
PE L + D+W+ G +
Sbjct: 180 APESLA-YNKFSIKSDVWAFGVLL 202
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 34.7 bits (78), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 20/105 (19%), Positives = 48/105 (45%), Gaps = 6/105 (5%)
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 197
++ + + + + +HRD++ N+++ L ++ D+GLA EY R +++
Sbjct: 122 QIAEGMAFIEERNYIHRDLRAANILVSDTL-SCKIADFGLARLIE-DNEYTAREGAKFPI 179
Query: 198 -FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHD 241
+ PE ++ + D+WS G + ++ + G N +
Sbjct: 180 KWTAPE-AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE 223
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 34.7 bits (78), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 79/204 (38%), Gaps = 28/204 (13%)
Query: 36 DQDDYEVVRKVGRGKYSEVFEGI-NVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGGPN 94
++ D + K+G G+Y EV+EG+ + + PN
Sbjct: 13 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 72
Query: 95 VVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDY------------DIRYYIYELL 142
+V+LL + + P I T+F + Y L DY + Y ++
Sbjct: 73 LVQLLGVCTRE---PPFYII-----TEF-MTYGNLLDYLRECNRQEVNAVVLLYMATQIS 123
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY---FK 199
A++Y + +HRD+ N ++ E +++ D+GL+ G Y +++ +
Sbjct: 124 SAMEYLEKKNFIHRDLAARNCLVG-ENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWT 181
Query: 200 GPELLVDLQDYDYSLDMWSLGCMF 223
PE L + D+W+ G +
Sbjct: 182 APESLA-YNKFSIKSDVWAFGVLL 204
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 34.7 bits (78), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 62/163 (38%), Gaps = 32/163 (19%)
Query: 40 YEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGG----PNV 95
Y+V R++G G + +FEG N+ N++ L G PNV
Sbjct: 12 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNV 71
Query: 96 VKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDY-----------DIRYYIYELLKA 144
Q L+ + +L P+L D + ++L
Sbjct: 72 YYF-----GQEGLHNVLVID--------LLGPSLEDLLDLCGRKFSVKTVAMAAKQMLAR 118
Query: 145 LDYCHSQGIMHRDVKPHNVMIDHELRK----LRLIDWGLAEFY 183
+ H + +++RD+KP N +I K + ++D+G+ +FY
Sbjct: 119 VQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY 161
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 34.7 bits (78), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 62/163 (38%), Gaps = 32/163 (19%)
Query: 40 YEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGG----PNV 95
Y+V R++G G + +FEG N+ N++ L G PNV
Sbjct: 11 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNV 70
Query: 96 VKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDY-----------DIRYYIYELLKA 144
Q L+ + +L P+L D + ++L
Sbjct: 71 YYF-----GQEGLHNVLVID--------LLGPSLEDLLDLCGRKFSVKTVAMAAKQMLAR 117
Query: 145 LDYCHSQGIMHRDVKPHNVMIDHELRK----LRLIDWGLAEFY 183
+ H + +++RD+KP N +I K + ++D+G+ +FY
Sbjct: 118 VQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY 160
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 34.7 bits (78), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 79/204 (38%), Gaps = 28/204 (13%)
Query: 36 DQDDYEVVRKVGRGKYSEVFEGI-NVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGGPN 94
++ D + K+G G+Y EV+EG+ + + PN
Sbjct: 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 70
Query: 95 VVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDY------------DIRYYIYELL 142
+V+LL + + P I T+F + Y L DY + Y ++
Sbjct: 71 LVQLLGVCTRE---PPFYII-----TEF-MTYGNLLDYLRECNRQEVNAVVLLYMATQIS 121
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY---FK 199
A++Y + +HRD+ N ++ E +++ D+GL+ G Y +++ +
Sbjct: 122 SAMEYLEKKNFIHRDLAARNCLVG-ENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWT 179
Query: 200 GPELLVDLQDYDYSLDMWSLGCMF 223
PE L + D+W+ G +
Sbjct: 180 APESLA-YNKFSIKSDVWAFGVLL 202
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 34.7 bits (78), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 20/105 (19%), Positives = 48/105 (45%), Gaps = 6/105 (5%)
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 197
++ + + + + +HRD++ N+++ L ++ D+GLA EY R +++
Sbjct: 117 QIAEGMAFIEERNYIHRDLRAANILVSDTL-SCKIADFGLARLIE-DNEYTAREGAKFPI 174
Query: 198 -FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHD 241
+ PE ++ + D+WS G + ++ + G N +
Sbjct: 175 KWTAPE-AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE 218
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 34.7 bits (78), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 41/226 (18%), Positives = 93/226 (41%), Gaps = 26/226 (11%)
Query: 37 QDDYEVVRKVGRGKYSEVFEGI-NVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGGPNV 95
++ ++++++G G++ EV+ G N NT ++ L +
Sbjct: 8 RESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHD-KL 66
Query: 96 VKLLDIVRDQHSKTPSLIFEYVNST---DF-------KVLYPTLTDYDIRYYIYELLKAL 145
V+L +V ++ ++ EY+N DF + P L D ++ +
Sbjct: 67 VQLYAVVSEEPI---YIVTEYMNKGSLLDFLKDGEGRALKLPNLVDM-----AAQVAAGM 118
Query: 146 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY---FKGPE 202
Y +HRD++ N+++ + L ++ D+GLA E R +++ + PE
Sbjct: 119 AYIERMNYIHRDLRSANILVGNGL-ICKIADFGLARLIE-DNEXTARQGAKFPIKWTAPE 176
Query: 203 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
+ + D+WS G + ++ + + G +N + L ++ +
Sbjct: 177 AAL-YGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVER 221
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 34.7 bits (78), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 79/204 (38%), Gaps = 28/204 (13%)
Query: 36 DQDDYEVVRKVGRGKYSEVFEGI-NVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGGPN 94
++ D + K+G G+Y EV+EG+ + + PN
Sbjct: 24 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 83
Query: 95 VVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDY------------DIRYYIYELL 142
+V+LL + + P I T+F + Y L DY + Y ++
Sbjct: 84 LVQLLGVCTRE---PPFYII-----TEF-MTYGNLLDYLRECNRQEVNAVVLLYMATQIS 134
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY---FK 199
A++Y + +HRD+ N ++ E +++ D+GL+ G Y +++ +
Sbjct: 135 SAMEYLEKKNFIHRDLAARNCLVG-ENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWT 192
Query: 200 GPELLVDLQDYDYSLDMWSLGCMF 223
PE L + D+W+ G +
Sbjct: 193 APESLA-YNKFSIKSDVWAFGVLL 215
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 34.7 bits (78), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 79/204 (38%), Gaps = 28/204 (13%)
Query: 36 DQDDYEVVRKVGRGKYSEVFEGI-NVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGGPN 94
++ D + K+G G+Y EV+EG+ + + PN
Sbjct: 16 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 75
Query: 95 VVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDY------------DIRYYIYELL 142
+V+LL + + P I T+F + Y L DY + Y ++
Sbjct: 76 LVQLLGVCTRE---PPFYII-----TEF-MTYGNLLDYLRECNRQEVNAVVLLYMATQIS 126
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY---FK 199
A++Y + +HRD+ N ++ E +++ D+GL+ G Y +++ +
Sbjct: 127 SAMEYLEKKNFIHRDLAARNCLVG-ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWT 184
Query: 200 GPELLVDLQDYDYSLDMWSLGCMF 223
PE L + D+W+ G +
Sbjct: 185 APESLA-YNKFSIKSDVWAFGVLL 207
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 34.7 bits (78), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 79/204 (38%), Gaps = 28/204 (13%)
Query: 36 DQDDYEVVRKVGRGKYSEVFEGI-NVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGGPN 94
++ D + K+G G+Y EV+EG+ + + PN
Sbjct: 15 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 74
Query: 95 VVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDY------------DIRYYIYELL 142
+V+LL + + P I T+F + Y L DY + Y ++
Sbjct: 75 LVQLLGVCTRE---PPFYII-----TEF-MTYGNLLDYLRECNRQEVNAVVLLYMATQIS 125
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY---FK 199
A++Y + +HRD+ N ++ E +++ D+GL+ G Y +++ +
Sbjct: 126 SAMEYLEKKNFIHRDLAARNCLVG-ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWT 183
Query: 200 GPELLVDLQDYDYSLDMWSLGCMF 223
PE L + D+W+ G +
Sbjct: 184 APESLA-YNKFSIKSDVWAFGVLL 206
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 34.7 bits (78), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 79/204 (38%), Gaps = 28/204 (13%)
Query: 36 DQDDYEVVRKVGRGKYSEVFEGI-NVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGGPN 94
++ D + K+G G+Y EV+EG+ + + PN
Sbjct: 13 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 72
Query: 95 VVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDY------------DIRYYIYELL 142
+V+LL + + P I T+F + Y L DY + Y ++
Sbjct: 73 LVQLLGVCTRE---PPFYII-----TEF-MTYGNLLDYLRECNRQEVNAVVLLYMATQIS 123
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY---FK 199
A++Y + +HRD+ N ++ E +++ D+GL+ G Y +++ +
Sbjct: 124 SAMEYLEKKNFIHRDLAARNCLVG-ENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWT 181
Query: 200 GPELLVDLQDYDYSLDMWSLGCMF 223
PE L + D+W+ G +
Sbjct: 182 APESLA-YNKFSIKSDVWAFGVLL 204
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 34.7 bits (78), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 96/241 (39%), Gaps = 39/241 (16%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELL-------KAL 145
PN++ L +V K +I EY+ + L D R+ + +L+ +
Sbjct: 75 PNIIHLEGVV--TKCKPVMIITEYMENGSLDAF---LRKNDGRFTVIQLVGMLRGIGSGM 129
Query: 146 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH--PGKEYNVRVASRYFK--GP 201
Y +HRD+ N++++ L ++ D+G++ P Y R + P
Sbjct: 130 KYLSDMSYVHRDLAARNILVNSNL-VCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAP 188
Query: 202 ELLVDLQDYDYSLDMWSLG-CMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLN 260
E + + + + D+WS G M+ M + + P++ D +Q D + A
Sbjct: 189 EAIA-YRKFTSASDVWSYGIVMWEVMSYGERPYW---DMSNQ----------DVIKAIEE 234
Query: 261 KYHLELDPQLDALVGRHS--RKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTARE 318
Y L P +D + H W K +D + ++ LDKL+R + + T E
Sbjct: 235 GYRLP--PPMDCPIALHQLMLDCWQKE-RSDRPKF--GQIVNMLDKLIRNPNSLKRTGSE 289
Query: 319 A 319
+
Sbjct: 290 S 290
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 34.7 bits (78), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 59/131 (45%), Gaps = 17/131 (12%)
Query: 98 LLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRD 157
LLD +R F NST TL+ + ++ ++ + +DY + +HR+
Sbjct: 110 LLDFLRKSRVLETDPAFAIANSTA-----STLSSQQLLHFAADVARGMDYLSQKQFIHRN 164
Query: 158 VKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSL--- 214
+ N+++ E ++ D+GL+ G+E V V + P + ++ +YS+
Sbjct: 165 LAARNILVG-ENYVAKIADFGLSR----GQE--VYVKKTMGRLPVRWMAIESLNYSVYTT 217
Query: 215 --DMWSLGCMF 223
D+WS G +
Sbjct: 218 NSDVWSYGVLL 228
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 34.7 bits (78), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 20/105 (19%), Positives = 48/105 (45%), Gaps = 6/105 (5%)
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 197
++ + + + + +HRD++ N+++ L ++ D+GLA EY R +++
Sbjct: 127 QIAEGMAFIEERNYIHRDLRAANILVSDTL-SCKIADFGLARLIE-DNEYTAREGAKFPI 184
Query: 198 -FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHD 241
+ PE ++ + D+WS G + ++ + G N +
Sbjct: 185 KWTAPE-AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE 228
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 34.7 bits (78), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Query: 128 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 187
LT D+ + +++ + + Y ++HRD+ N+++ E RK+++ D+GL+ +
Sbjct: 146 ALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILV-AEGRKMKISDFGLSRDVYEED 204
Query: 188 EYNVRVASRYFKGPELLVDLQDYDYSL--DMWSLGCMF 223
R R + L D+ Y+ D+WS G +
Sbjct: 205 SXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLL 242
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 34.7 bits (78), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 79/204 (38%), Gaps = 28/204 (13%)
Query: 36 DQDDYEVVRKVGRGKYSEVFEGI-NVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGGPN 94
++ D + K+G G+Y EV+EG+ + + PN
Sbjct: 16 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 75
Query: 95 VVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDY------------DIRYYIYELL 142
+V+LL + + P I T+F + Y L DY + Y ++
Sbjct: 76 LVQLLGVCTRE---PPFYII-----TEF-MTYGNLLDYLRECNRQEVNAVVLLYMATQIS 126
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY---FK 199
A++Y + +HRD+ N ++ E +++ D+GL+ G Y +++ +
Sbjct: 127 SAMEYLEKKNFIHRDLAARNCLVG-ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWT 184
Query: 200 GPELLVDLQDYDYSLDMWSLGCMF 223
PE L + D+W+ G +
Sbjct: 185 APESLA-YNKFSIKSDVWAFGVLL 207
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 34.7 bits (78), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 49/91 (53%), Gaps = 7/91 (7%)
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE--FYHPG--KEYNVR 192
Y +++ K +++ S+ +HRD+ N+++ E +++ D+GLA + P ++ + R
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 193 VASRYFKGPELLVDLQDYDYSLDMWSLGCMF 223
+ ++ PE + D + Y D+WS G +
Sbjct: 212 LPLKWM-APETIFD-RVYTIQSDVWSFGVLL 240
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 34.7 bits (78), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 96/241 (39%), Gaps = 39/241 (16%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELL-------KAL 145
PN++ L +V K +I EY+ + L D R+ + +L+ +
Sbjct: 69 PNIIHLEGVV--TKCKPVMIITEYMENGSLDAF---LRKNDGRFTVIQLVGMLRGIGSGM 123
Query: 146 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH--PGKEYNVRVASRYFK--GP 201
Y +HRD+ N++++ L ++ D+G++ P Y R + P
Sbjct: 124 KYLSDMSYVHRDLAARNILVNSNL-VCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAP 182
Query: 202 ELLVDLQDYDYSLDMWSLG-CMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLN 260
E + + + + D+WS G M+ M + + P++ D +Q D + A
Sbjct: 183 EAIA-YRKFTSASDVWSYGIVMWEVMSYGERPYW---DMSNQ----------DVIKAIEE 228
Query: 261 KYHLELDPQLDALVGRHS--RKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTARE 318
Y L P +D + H W K +D + ++ LDKL+R + + T E
Sbjct: 229 GYRLP--PPMDCPIALHQLMLDCWQKE-RSDRPKF--GQIVNMLDKLIRNPNSLKRTGSE 283
Query: 319 A 319
+
Sbjct: 284 S 284
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 79/204 (38%), Gaps = 28/204 (13%)
Query: 36 DQDDYEVVRKVGRGKYSEVFEGI-NVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGGPN 94
++ D + K+G G+Y EV+EG+ + + PN
Sbjct: 13 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 72
Query: 95 VVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDY------------DIRYYIYELL 142
+V+LL + + P I T+F + Y L DY + Y ++
Sbjct: 73 LVQLLGVCTRE---PPFYII-----TEF-MTYGNLLDYLRECNRQEVNAVVLLYMATQIS 123
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY---FK 199
A++Y + +HRD+ N ++ E +++ D+GL+ G Y +++ +
Sbjct: 124 SAMEYLEKKNFIHRDLAARNCLVG-ENHLVKVADFGLSRLMT-GDTYTAPAGAKFPIKWT 181
Query: 200 GPELLVDLQDYDYSLDMWSLGCMF 223
PE L + D+W+ G +
Sbjct: 182 APESLA-YNKFSIKSDVWAFGVLL 204
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 47/87 (54%), Gaps = 6/87 (6%)
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 197
++ +A++Y S+ +HRD+ N +++ + +++ D+GL+ Y EY V S++
Sbjct: 108 DVCEAMEYLESKQFLHRDLAARNCLVNDQ-GVVKVSDFGLSR-YVLDDEYTSSVGSKFPV 165
Query: 198 -FKGPELLVDLQDYDYSLDMWSLGCMF 223
+ PE+L+ + D+W+ G +
Sbjct: 166 RWSPPEVLM-YSKFSSKSDIWAFGVLM 191
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 79/204 (38%), Gaps = 28/204 (13%)
Query: 36 DQDDYEVVRKVGRGKYSEVFEGI-NVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGGPN 94
++ D + K+G G+Y EV+EG+ + + PN
Sbjct: 12 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 71
Query: 95 VVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDY------------DIRYYIYELL 142
+V+LL + + P I T+F + Y L DY + Y ++
Sbjct: 72 LVQLLGVCTRE---PPFYII-----TEF-MTYGNLLDYLRECNRQEVNAVVLLYMATQIS 122
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY---FK 199
A++Y + +HRD+ N ++ E +++ D+GL+ G Y +++ +
Sbjct: 123 SAMEYLEKKNFIHRDLAARNCLVG-ENHLVKVADFGLSRLMT-GDTYTAPAGAKFPIKWT 180
Query: 200 GPELLVDLQDYDYSLDMWSLGCMF 223
PE L + D+W+ G +
Sbjct: 181 APESLA-YNKFSIKSDVWAFGVLL 203
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 47/87 (54%), Gaps = 6/87 (6%)
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 197
++ +A++Y S+ +HRD+ N +++ + +++ D+GL+ Y EY V S++
Sbjct: 112 DVCEAMEYLESKQFLHRDLAARNCLVNDQ-GVVKVSDFGLSR-YVLDDEYTSSVGSKFPV 169
Query: 198 -FKGPELLVDLQDYDYSLDMWSLGCMF 223
+ PE+L+ + D+W+ G +
Sbjct: 170 RWSPPEVLM-YSKFSSKSDIWAFGVLM 195
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 47/87 (54%), Gaps = 6/87 (6%)
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 197
++ +A++Y S+ +HRD+ N +++ + +++ D+GL+ Y EY V S++
Sbjct: 128 DVCEAMEYLESKQFLHRDLAARNCLVNDQ-GVVKVSDFGLSR-YVLDDEYTSSVGSKFPV 185
Query: 198 -FKGPELLVDLQDYDYSLDMWSLGCMF 223
+ PE+L+ + D+W+ G +
Sbjct: 186 RWSPPEVLM-YSKFSSKSDIWAFGVLM 211
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 47/87 (54%), Gaps = 6/87 (6%)
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 197
++ +A++Y S+ +HRD+ N +++ + +++ D+GL+ Y EY V S++
Sbjct: 119 DVCEAMEYLESKQFLHRDLAARNCLVNDQ-GVVKVSDFGLSR-YVLDDEYTSSVGSKFPV 176
Query: 198 -FKGPELLVDLQDYDYSLDMWSLGCMF 223
+ PE+L+ + D+W+ G +
Sbjct: 177 RWSPPEVLM-YSKFSSKSDIWAFGVLM 202
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 47/87 (54%), Gaps = 6/87 (6%)
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 197
++ +A++Y S+ +HRD+ N +++ + +++ D+GL+ Y EY V S++
Sbjct: 113 DVCEAMEYLESKQFLHRDLAARNCLVNDQ-GVVKVSDFGLSR-YVLDDEYTSSVGSKFPV 170
Query: 198 -FKGPELLVDLQDYDYSLDMWSLGCMF 223
+ PE+L+ + D+W+ G +
Sbjct: 171 RWSPPEVLM-YSKFSSKSDIWAFGVLM 196
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/195 (18%), Positives = 78/195 (40%), Gaps = 10/195 (5%)
Query: 36 DQDDYEVVRKVGRGKYSEVFEGI-NVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGGPN 94
++ D + K+G G+Y EV+EG+ + + PN
Sbjct: 9 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 68
Query: 95 VVKLLDI-VRDQHSKTPSLIFEYVNSTDF--KVLYPTLTDYDIRYYIYELLKALDYCHSQ 151
+V+LL + R+ + Y N D+ + ++ + Y ++ A++Y +
Sbjct: 69 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 128
Query: 152 GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY---FKGPELLVDLQ 208
+HRD+ N ++ E +++ D+GL+ G + +++ + PE L
Sbjct: 129 NFIHRDLAARNCLVG-ENHLVKVADFGLSRLM-TGDTFTAHAGAKFPIKWTAPESLA-YN 185
Query: 209 DYDYSLDMWSLGCMF 223
+ D+W+ G +
Sbjct: 186 KFSIKSDVWAFGVLL 200
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 197
++ + Y +HRD++ N+++ L ++ D+GLA EY R +++
Sbjct: 288 QIASGMAYVERMNYVHRDLRAANILVGENL-VCKVADFGLARLIE-DNEYTARQGAKFPI 345
Query: 198 -FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
+ PE + + D+WS G + + + + G N + L ++ +
Sbjct: 346 KWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 396
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 197
++ + Y +HRD++ N+++ L ++ D+GLA EY R +++
Sbjct: 288 QIASGMAYVERMNYVHRDLRAANILVGENL-VCKVADFGLARLIE-DNEYTARQGAKFPI 345
Query: 198 -FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
+ PE + + D+WS G + + + + G N + L ++ +
Sbjct: 346 KWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 396
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 197
++ + Y +HRD++ N+++ L ++ D+GLA EY R +++
Sbjct: 288 QIASGMAYVERMNYVHRDLRAANILVGENL-VCKVADFGLARLIE-DNEYTARQGAKFPI 345
Query: 198 -FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
+ PE + + D+WS G + + + + G N + L ++ +
Sbjct: 346 KWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 396
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPG----KEYNVR 192
Y +++ K +++ S+ +HRD+ N+++ E +++ D+GLA ++ + R
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 193 VASRYFKGPELLVDLQDYDYSLDMWSLGCMF 223
+ ++ PE + D + Y D+WS G +
Sbjct: 203 LPLKWM-APETIFD-RVYTIQSDVWSFGVLL 231
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 197
++ + Y +HRD++ N+++ L ++ D+GLA EY R +++
Sbjct: 371 QIASGMAYVERMNYVHRDLRAANILVGENL-VCKVADFGLARLIE-DNEYTARQGAKFPI 428
Query: 198 -FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
+ PE + + D+WS G + + + + G N + L ++ +
Sbjct: 429 KWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 479
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPG----KEYNVR 192
Y +++ K +++ S+ +HRD+ N+++ E +++ D+GLA ++ + R
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 193 VASRYFKGPELLVDLQDYDYSLDMWSLGCMF 223
+ ++ PE + D + Y D+WS G +
Sbjct: 203 LPLKWM-APETIFD-RVYTIQSDVWSFGVLL 231
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/195 (18%), Positives = 78/195 (40%), Gaps = 10/195 (5%)
Query: 36 DQDDYEVVRKVGRGKYSEVFEGI-NVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGGPN 94
++ D + K+G G+Y EV+EG+ + + PN
Sbjct: 218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 277
Query: 95 VVKLLDI-VRDQHSKTPSLIFEYVNSTDF--KVLYPTLTDYDIRYYIYELLKALDYCHSQ 151
+V+LL + R+ + Y N D+ + ++ + Y ++ A++Y +
Sbjct: 278 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 337
Query: 152 GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY---FKGPELLVDLQ 208
+HR++ N ++ E +++ D+GL+ G Y +++ + PE L
Sbjct: 338 NFIHRNLAARNCLVG-ENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA-YN 394
Query: 209 DYDYSLDMWSLGCMF 223
+ D+W+ G +
Sbjct: 395 KFSIKSDVWAFGVLL 409
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 56/143 (39%), Gaps = 22/143 (15%)
Query: 152 GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY-----NVRVASRYFKGPELL-- 204
I HRD+K N+++ + + D GLA + N RV ++ + PE+L
Sbjct: 133 AIAHRDLKSKNILVKKN-GQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDE 191
Query: 205 ---VDLQDYDYSLDMWSLGCMFAGMIFR----------KEPFFYGHDNHDQLVKIAKVLG 251
VD D +D+W+ G + + R K PF+ N + KV+
Sbjct: 192 TIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVC 251
Query: 252 TDELNAYLNKYHLELDPQLDALV 274
D+ + DP L +L
Sbjct: 252 VDQQRPNIPNRWFS-DPTLTSLA 273
>pdb|1CT9|A Chain A, Crystal Structure Of Asparagine Synthetase B From
Escherichia Coli
pdb|1CT9|B Chain B, Crystal Structure Of Asparagine Synthetase B From
Escherichia Coli
pdb|1CT9|C Chain C, Crystal Structure Of Asparagine Synthetase B From
Escherichia Coli
pdb|1CT9|D Chain D, Crystal Structure Of Asparagine Synthetase B From
Escherichia Coli
Length = 553
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 14/114 (12%)
Query: 139 YELLKALDYCHSQGIMHRDVKPHNVMIDHEL---RKLRLIDWGLAEFYHPGKEYNVRVAS 195
+E L +D ++ K H + ++ E+ + LR ++G + G + V +A
Sbjct: 47 HERLSIVDVNAGAQPLYNQQKTHVLAVNGEIYNHQALR-AEYGDRYQFQTGSDCEVILAL 105
Query: 196 RYFKGPELLVDLQD------YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQL 243
KGPE L DLQ YD D + +G G+I P + G+D H QL
Sbjct: 106 YQEKGPEFLDDLQGMFAFALYDSEKDAYLIGRDHLGII----PLYMGYDEHGQL 155
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 56/143 (39%), Gaps = 22/143 (15%)
Query: 152 GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY-----NVRVASRYFKGPELL-- 204
I HRD+K N+++ + + D GLA + N RV ++ + PE+L
Sbjct: 133 AIAHRDLKSKNILVKKN-GQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDE 191
Query: 205 ---VDLQDYDYSLDMWSLGCMFAGMIFR----------KEPFFYGHDNHDQLVKIAKVLG 251
VD D +D+W+ G + + R K PF+ N + KV+
Sbjct: 192 TIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVC 251
Query: 252 TDELNAYLNKYHLELDPQLDALV 274
D+ + DP L +L
Sbjct: 252 VDQQRPNIPNRWFS-DPTLTSLA 273
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 79/204 (38%), Gaps = 28/204 (13%)
Query: 36 DQDDYEVVRKVGRGKYSEVFEGI-NVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGGPN 94
++ D + K+G G+Y EV+EG+ + + PN
Sbjct: 257 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 316
Query: 95 VVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDY------------DIRYYIYELL 142
+V+LL + + P I T+F + Y L DY + Y ++
Sbjct: 317 LVQLLGVCTRE---PPFYII-----TEF-MTYGNLLDYLRECNRQEVNAVVLLYMATQIS 367
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY---FK 199
A++Y + +HR++ N ++ E +++ D+GL+ G Y +++ +
Sbjct: 368 SAMEYLEKKNFIHRNLAARNCLVG-ENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWT 425
Query: 200 GPELLVDLQDYDYSLDMWSLGCMF 223
PE L + D+W+ G +
Sbjct: 426 APESLA-YNKFSIKSDVWAFGVLL 448
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 40/210 (19%), Positives = 81/210 (38%), Gaps = 40/210 (19%)
Query: 36 DQDDYEVVRKVGRGKYSEVFEGI-NVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGGPN 94
++ D + K+G G+Y EV+EG+ + + PN
Sbjct: 9 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 68
Query: 95 VVKLLDIVRDQHSKTPS--LIFEYVNSTDFKVLYPTLTDY------------DIRYYIYE 140
+V+LL + ++ P +I E++ Y L DY + Y +
Sbjct: 69 LVQLLGVC----TREPPFYIIIEFMT-------YGNLLDYLRECNRQEVSAVVLLYMATQ 117
Query: 141 LLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFY-------HPGKEYNVRV 193
+ A++Y + +HRD+ N ++ E +++ D+GL+ H G ++ ++
Sbjct: 118 ISSAMEYLEKKNFIHRDLAARNCLVG-ENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK- 175
Query: 194 ASRYFKGPELLVDLQDYDYSLDMWSLGCMF 223
+ PE L + D+W+ G +
Sbjct: 176 ----WTAPESLA-YNKFSIKSDVWAFGVLL 200
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 56/143 (39%), Gaps = 22/143 (15%)
Query: 152 GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY-----NVRVASRYFKGPELL-- 204
I HRD+K N+++ + + D GLA + N RV ++ + PE+L
Sbjct: 162 AIAHRDLKSKNILVKKN-GQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDE 220
Query: 205 ---VDLQDYDYSLDMWSLGCMFAGMIFR----------KEPFFYGHDNHDQLVKIAKVLG 251
VD D +D+W+ G + + R K PF+ N + KV+
Sbjct: 221 TIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVC 280
Query: 252 TDELNAYLNKYHLELDPQLDALV 274
D+ + DP L +L
Sbjct: 281 VDQQRPNIPNRWFS-DPTLTSLA 302
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 196
Y +++ K +++ S+ +HRD+ N+++ E +++ D+GLA + + +R
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 197 Y---FKGPELLVDLQDYDYSLDMWSLGCMF 223
+ PE + D + Y D+WS G +
Sbjct: 212 LPLKWMAPETIFD-RVYTIQSDVWSFGVLL 240
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 196
Y +++ K +++ S+ +HRD+ N+++ E +++ D+GLA + + +R
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 197 Y---FKGPELLVDLQDYDYSLDMWSLGCMF 223
+ PE + D + Y D+WS G +
Sbjct: 212 LPLKWMAPETIFD-RVYTIQSDVWSFGVLL 240
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPG----KEYNVR 192
Y +++ K +++ S+ +HRD+ N+++ E +++ D+GLA ++ + R
Sbjct: 153 YSFQVAKGMEFLASRKXIHRDLAARNILLS-EKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 193 VASRYFKGPELLVDLQDYDYSLDMWSLGCMF 223
+ ++ PE + D + Y D+WS G +
Sbjct: 212 LPLKWM-APETIFD-RVYTIQSDVWSFGVLL 240
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 40/210 (19%), Positives = 81/210 (38%), Gaps = 40/210 (19%)
Query: 36 DQDDYEVVRKVGRGKYSEVFEGI-NVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGGPN 94
++ D + K+G G+Y EV+EG+ + + PN
Sbjct: 12 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 71
Query: 95 VVKLLDIVRDQHSKTPS--LIFEYVNSTDFKVLYPTLTDY------------DIRYYIYE 140
+V+LL + ++ P +I E++ Y L DY + Y +
Sbjct: 72 LVQLLGVC----TREPPFYIIIEFMT-------YGNLLDYLRECNRQEVNAVVLLYMATQ 120
Query: 141 LLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFY-------HPGKEYNVRV 193
+ A++Y + +HRD+ N ++ E +++ D+GL+ H G ++ ++
Sbjct: 121 ISSAMEYLEKKNFIHRDLAARNCLVG-ENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK- 178
Query: 194 ASRYFKGPELLVDLQDYDYSLDMWSLGCMF 223
+ PE L + D+W+ G +
Sbjct: 179 ----WTAPESLA-YNKFSIKSDVWAFGVLL 203
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 197
++ + Y +HRD++ N+++ L ++ D+GLA EY R +++
Sbjct: 119 QIASGMAYVERMNYVHRDLRAANILVGENL-VCKVADFGLARLIE-DNEYTARQGAKFPI 176
Query: 198 -FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
+ PE + + D+WS G + + + + G N + L ++ +
Sbjct: 177 KWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 227
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP-GKEYNVRVAS 195
+ ++ K ++Y + ++HRD+ NV++ + +++ D+GLA+ KEY+
Sbjct: 124 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGK 182
Query: 196 RYFKGPELLVDLQD-YDYSLDMWSLG-CMFAGMIFRKEPF 233
K L L Y + D+WS G ++ M F +P+
Sbjct: 183 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 222
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP-GKEYNVRVAS 195
+ ++ K ++Y + ++HRD+ NV++ + +++ D+GLA+ KEY+
Sbjct: 128 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGK 186
Query: 196 RYFKGPELLVDLQD-YDYSLDMWSLG-CMFAGMIFRKEPF 233
K L L Y + D+WS G ++ M F +P+
Sbjct: 187 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 226
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP-GKEYNVRVAS 195
+ ++ K ++Y + ++HRD+ NV++ + +++ D+GLA+ KEY+
Sbjct: 129 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGK 187
Query: 196 RYFKGPELLVDLQD-YDYSLDMWSLG-CMFAGMIFRKEPF 233
K L L Y + D+WS G ++ M F +P+
Sbjct: 188 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 227
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 79/204 (38%), Gaps = 28/204 (13%)
Query: 36 DQDDYEVVRKVGRGKYSEVFEGI-NVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGGPN 94
++ D + K+G G+Y EV+EG+ + + PN
Sbjct: 215 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 274
Query: 95 VVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDY------------DIRYYIYELL 142
+V+LL + + P I T+F + Y L DY + Y ++
Sbjct: 275 LVQLLGVCTRE---PPFYII-----TEF-MTYGNLLDYLRECNRQEVNAVVLLYMATQIS 325
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY---FK 199
A++Y + +HR++ N ++ E +++ D+GL+ G Y +++ +
Sbjct: 326 SAMEYLEKKNFIHRNLAARNCLVG-ENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWT 383
Query: 200 GPELLVDLQDYDYSLDMWSLGCMF 223
PE L + D+W+ G +
Sbjct: 384 APESLA-YNKFSIKSDVWAFGVLL 406
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP-GKEYNVRVAS 195
+ ++ K ++Y + ++HRD+ NV++ + +++ D+GLA+ KEY+
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 196 RYFKGPELLVDLQD-YDYSLDMWSLG-CMFAGMIFRKEPF 233
K L L Y + D+WS G ++ M F +P+
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP-GKEYNVRVAS 195
+ ++ K ++Y + ++HRD+ NV++ + +++ D+GLA+ KEY+
Sbjct: 116 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGK 174
Query: 196 RYFKGPELLVDLQD-YDYSLDMWSLG-CMFAGMIFRKEPF 233
K L L Y + D+WS G ++ M F +P+
Sbjct: 175 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 214
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 197
++ + Y +HRD++ N+++ L ++ D+GLA EY R +++
Sbjct: 111 QIASGMAYVERMNYVHRDLRAANILVGENL-VCKVADFGLARLIE-DNEYTARQGAKFPI 168
Query: 198 -FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
+ PE + + D+WS G + + + + G N + L ++ +
Sbjct: 169 KWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 219
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 197
++ + Y +HRD++ N+++ L ++ D+GLA EY R +++
Sbjct: 115 QIASGMAYVERMNYVHRDLRAANILVGENL-VCKVADFGLARLIE-DNEYTARQGAKFPI 172
Query: 198 -FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
+ PE + + D+WS G + + + + G N + L ++ +
Sbjct: 173 KWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 223
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 197
++ + Y +HRD++ N+++ L ++ D+GLA EY R +++
Sbjct: 113 QIASGMAYVERMNYVHRDLRAANILVGENL-VCKVADFGLARLIE-DNEYTARQGAKFPI 170
Query: 198 -FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
+ PE + + D+WS G + + + + G N + L ++ +
Sbjct: 171 KWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 221
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP-GKEYNVRVAS 195
+ ++ K ++Y + ++HRD+ NV++ + +++ D+GLA+ KEY+
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 196 RYFKGPELLVDLQD-YDYSLDMWSLG-CMFAGMIFRKEPF 233
K L L Y + D+WS G ++ M F +P+
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP-GKEYNVRVAS 195
+ ++ K ++Y + ++HRD+ NV++ + +++ D+GLA+ KEY+
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 196 RYFKGPELLVDLQD-YDYSLDMWSLG-CMFAGMIFRKEPF 233
K L L Y + D+WS G ++ M F +P+
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP-GKEYNVRVAS 195
+ ++ K ++Y + ++HRD+ NV++ + +++ D+GLA+ KEY+
Sbjct: 147 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGK 205
Query: 196 RYFKGPELLVDLQD-YDYSLDMWSLG-CMFAGMIFRKEPF 233
K L L Y + D+WS G ++ M F +P+
Sbjct: 206 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 245
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP-GKEYNVRVAS 195
+ ++ K ++Y + ++HRD+ NV++ + +++ D+GLA+ KEY+
Sbjct: 129 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGK 187
Query: 196 RYFKGPELLVDLQD-YDYSLDMWSLG-CMFAGMIFRKEPF 233
K L L Y + D+WS G ++ M F +P+
Sbjct: 188 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 227
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP-GKEYNVRVAS 195
+ ++ K ++Y + ++HRD+ NV++ + +++ D+GLA+ KEY+
Sbjct: 123 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGK 181
Query: 196 RYFKGPELLVDLQD-YDYSLDMWSLG-CMFAGMIFRKEPF 233
K L L Y + D+WS G ++ M F +P+
Sbjct: 182 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 221
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP-GKEYNVRVAS 195
+ ++ K ++Y + ++HRD+ NV++ + +++ D+GLA+ KEY+
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 196 RYFKGPELLVDLQD-YDYSLDMWSLG-CMFAGMIFRKEPF 233
K L L Y + D+WS G ++ M F +P+
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP-GKEYNVRVAS 195
+ ++ K ++Y + ++HRD+ NV++ + +++ D+GLA+ KEY+
Sbjct: 125 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 196 RYFKGPELLVDLQD-YDYSLDMWSLG-CMFAGMIFRKEPF 233
K L L Y + D+WS G ++ M F +P+
Sbjct: 184 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 223
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP-GKEYNVRVAS 195
+ ++ K ++Y + ++HRD+ NV++ + +++ D+GLA+ KEY+
Sbjct: 123 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGK 181
Query: 196 RYFKGPELLVDLQD-YDYSLDMWSLG-CMFAGMIFRKEPF 233
K L L Y + D+WS G ++ M F +P+
Sbjct: 182 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 221
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP-GKEYNVRVAS 195
+ ++ K ++Y + ++HRD+ NV++ + +++ D+GLA+ KEY+
Sbjct: 125 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 196 RYFKGPELLVDLQD-YDYSLDMWSLG-CMFAGMIFRKEPF 233
K L L Y + D+WS G ++ M F +P+
Sbjct: 184 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 223
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP-GKEYNVRVAS 195
+ ++ K ++Y + ++HRD+ NV++ + +++ D+GLA+ KEY+
Sbjct: 129 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGK 187
Query: 196 RYFKGPELLVDLQD-YDYSLDMWSLG-CMFAGMIFRKEPF 233
K L L Y + D+WS G ++ M F +P+
Sbjct: 188 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 227
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP-GKEYNVRVAS 195
+ ++ K ++Y + ++HRD+ NV++ + +++ D+GLA+ KEY+
Sbjct: 125 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 196 RYFKGPELLVDLQD-YDYSLDMWSLG-CMFAGMIFRKEPF 233
K L L Y + D+WS G ++ M F +P+
Sbjct: 184 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 223
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP-GKEYNVRVAS 195
+ ++ K ++Y + ++HRD+ NV++ + +++ D+GLA+ KEY+
Sbjct: 132 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGK 190
Query: 196 RYFKGPELLVDLQD-YDYSLDMWSLG-CMFAGMIFRKEPF 233
K L L Y + D+WS G ++ M F +P+
Sbjct: 191 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 230
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP-GKEYNVRVAS 195
+ ++ K ++Y + ++HRD+ NV++ + +++ D+GLA+ KEY+
Sbjct: 124 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGK 182
Query: 196 RYFKGPELLVDLQD-YDYSLDMWSLG-CMFAGMIFRKEPF 233
K L L Y + D+WS G ++ M F +P+
Sbjct: 183 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 222
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP-GKEYNVRVAS 195
+ ++ K ++Y + ++HRD+ NV++ + +++ D+GLA+ KEY+
Sbjct: 126 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGK 184
Query: 196 RYFKGPELLVDLQD-YDYSLDMWSLG-CMFAGMIFRKEPF 233
K L L Y + D+WS G ++ M F +P+
Sbjct: 185 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 224
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP-GKEYNVRVAS 195
+ ++ K ++Y + ++HRD+ NV++ + +++ D+GLA+ KEY+
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 196 RYFKGPELLVDLQD-YDYSLDMWSLG-CMFAGMIFRKEPF 233
K L L Y + D+WS G ++ M F +P+
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP-GKEYNVRVAS 195
+ ++ K ++Y + ++HRD+ NV++ + +++ D+GLA+ KEY+
Sbjct: 125 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 196 RYFKGPELLVDLQD-YDYSLDMWSLG-CMFAGMIFRKEPF 233
K L L Y + D+WS G ++ M F +P+
Sbjct: 184 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 223
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP-GKEYNVRVAS 195
+ ++ K ++Y + ++HRD+ NV++ + +++ D+GLA+ KEY+
Sbjct: 156 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGK 214
Query: 196 RYFKGPELLVDLQD-YDYSLDMWSLG-CMFAGMIFRKEPF 233
K L L Y + D+WS G ++ M F +P+
Sbjct: 215 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 254
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 197
++ + Y +HRD++ N+++ L ++ D+GLA EY R +++
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENL-VCKVADFGLARLIE-DNEYTARQGAKFPI 179
Query: 198 -FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
+ PE + + D+WS G + + + + G N + L ++ +
Sbjct: 180 KWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 197
++ + Y +HRD++ N+++ L ++ D+GLA EY R +++
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENL-VCKVADFGLARLIE-DNEYTARQGAKFPI 179
Query: 198 -FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
+ PE + + D+WS G + + + + G N + L ++ +
Sbjct: 180 KWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 41/208 (19%), Positives = 80/208 (38%), Gaps = 36/208 (17%)
Query: 36 DQDDYEVVRKVGRGKYSEVFEGI-NVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGGPN 94
++ D + K+G G+Y EV+EG+ + + PN
Sbjct: 16 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 75
Query: 95 VVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDY------------DIRYYIYELL 142
+V+LL + + P I T+F + Y L DY + Y ++
Sbjct: 76 LVQLLGVCTRE---PPFYII-----TEF-MTYGNLLDYLRECNRQEVNAVVLLYMATQIS 126
Query: 143 KALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFY-------HPGKEYNVRVAS 195
A++Y + +HRD+ N ++ E +++ D+GL+ H G ++ ++
Sbjct: 127 SAMEYLEKKNFIHRDLAARNCLVG-ENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK--- 182
Query: 196 RYFKGPELLVDLQDYDYSLDMWSLGCMF 223
+ PE L + D+W+ G +
Sbjct: 183 --WTAPESLA-YNKFSIKSDVWAFGVLL 207
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 146 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG---PE 202
D+C + I+HRDVK N+++D E + + D+GLA+ K+ +V A R G PE
Sbjct: 149 DHCDPK-IIHRDVKAANILLDEEFEAV-VGDFGLAKLMDY-KDXHVXXAVRGXIGHIAPE 205
Query: 203 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 233
L + + + D++ G M +I + F
Sbjct: 206 YLSTGKSSEKT-DVFGYGVMLLELITGQRAF 235
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 32.3 bits (72), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 197
++ + Y +HRD++ N+++ L ++ D+GLA EY R +++
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENL-VCKVADFGLARLIE-DNEYTARQGAKFPI 179
Query: 198 -FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
+ PE + + D+WS G + + + + G N + L ++ +
Sbjct: 180 KWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 197
++ + Y +HRD++ N+++ L ++ D+GLA EY R +++
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENL-VCKVADFGLARLIE-DNEYTARQGAKFPI 179
Query: 198 -FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
+ PE + + D+WS G + + + + G N + L ++ +
Sbjct: 180 KWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 197
++ + Y +HRD++ N+++ L ++ D+GLA EY R +++
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENL-VCKVADFGLARLIE-DNEYTARQGAKFPI 179
Query: 198 -FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
+ PE + + D+WS G + + + + G N + L ++ +
Sbjct: 180 KWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 197
++ + Y +HRD++ N+++ L ++ D+GLA EY R +++
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENL-VCKVADFGLARLIE-DNEYTARQGAKFPI 179
Query: 198 -FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
+ PE + + D+WS G + + + + G N + L ++ +
Sbjct: 180 KWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 5/94 (5%)
Query: 133 DIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR 192
D+ ++ ++ + + + S+ +HRDV NV++ + ++ D+GLA Y V+
Sbjct: 153 DLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNG-HVAKIGDFGLARDIMNDSNYIVK 211
Query: 193 VASRY---FKGPELLVDLQDYDYSLDMWSLGCMF 223
+R + PE + D Y D+WS G +
Sbjct: 212 GNARLPVKWMAPESIFDCV-YTVQSDVWSYGILL 244
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 5/94 (5%)
Query: 133 DIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR 192
D+ ++ ++ + + + S+ +HRDV NV++ + ++ D+GLA Y V+
Sbjct: 159 DLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNG-HVAKIGDFGLARDIMNDSNYIVK 217
Query: 193 VASRY---FKGPELLVDLQDYDYSLDMWSLGCMF 223
+R + PE + D Y D+WS G +
Sbjct: 218 GNARLPVKWMAPESIFDCV-YTVQSDVWSYGILL 250
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 37/206 (17%), Positives = 78/206 (37%), Gaps = 34/206 (16%)
Query: 36 DQDDYEVVRKVGRGKYSEVFEGINVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGGPNV 95
D + V+++G G++ V G +N ++ + P +
Sbjct: 5 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKL 64
Query: 96 VKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDY-----------DIRYYIYELLKA 144
V+L + +Q L+FE++ + L+DY + ++ +
Sbjct: 65 VQLYGVCLEQ--APICLVFEFME-------HGCLSDYLRTQRGLFAAETLLGMCLDVCEG 115
Query: 145 LDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFY-------HPGKEYNVRVASRY 197
+ Y ++HRD+ N ++ E + +++ D+G+ F G ++ V+ AS
Sbjct: 116 MAYLEEASVIHRDLAARNCLVG-ENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWAS-- 172
Query: 198 FKGPELLVDLQDYDYSLDMWSLGCMF 223
PE+ Y D+WS G +
Sbjct: 173 ---PEVF-SFSRYSSKSDVWSFGVLM 194
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPG-KEYNVRVAS 195
+ ++ K + Y + ++HRD+ NV++ +++ D+GLA KEYN
Sbjct: 122 WCVQIAKGMMYLEERRLVHRDLAARNVLVKSP-NHVKITDFGLARLLEGDEKEYNADGGK 180
Query: 196 RYFKGPEL-LVDLQDYDYSLDMWSLG-CMFAGMIFRKEPF 233
K L + + + + D+WS G ++ M F +P+
Sbjct: 181 MPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPY 220
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 146 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG---PE 202
D+C + I+HRDVK N+++D E + + D+GLA+ K+ +V A R G PE
Sbjct: 157 DHCDPK-IIHRDVKAANILLDEEFEAV-VGDFGLAKLMDY-KDXHVXXAVRGTIGHIAPE 213
Query: 203 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 233
L + + + D++ G M +I + F
Sbjct: 214 YLSTGKSSEKT-DVFGYGVMLLELITGQRAF 243
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 5/94 (5%)
Query: 133 DIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR 192
D+ ++ ++ + + + S+ +HRDV NV++ + ++ D+GLA Y V+
Sbjct: 161 DLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNG-HVAKIGDFGLARDIMNDSNYIVK 219
Query: 193 VASRY---FKGPELLVDLQDYDYSLDMWSLGCMF 223
+R + PE + D Y D+WS G +
Sbjct: 220 GNARLPVKWMAPESIFDCV-YTVQSDVWSYGILL 252
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 32.0 bits (71), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 78/184 (42%), Gaps = 32/184 (17%)
Query: 93 PNVVKLLDIV-RDQHSKTPSLIFEYVNSTDF-------------------KVLYPTLTDY 132
PNVV LL +V +DQ S+IF Y + D + + L
Sbjct: 72 PNVVCLLGVVTKDQ---PLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPP 128
Query: 133 DIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY--- 189
D + + ++ ++Y S ++H+D+ NV++ +L +++ D GL + Y
Sbjct: 129 DFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKL-NVKISDLGLFREVYAADYYKLL 187
Query: 190 -NVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHD--QLVKI 246
N + R+ PE ++ + D+WS G + + + G+ N D ++++
Sbjct: 188 GNSLLPIRWM-APEAIM-YGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRN 245
Query: 247 AKVL 250
+VL
Sbjct: 246 RQVL 249
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 32.0 bits (71), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/105 (18%), Positives = 47/105 (44%), Gaps = 6/105 (5%)
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 197
++ + + + + +HRD++ N+++ L ++ D+GLA E R +++
Sbjct: 119 QIAEGMAFIEERNYIHRDLRAANILVSDTL-SCKIADFGLARLIE-DNEXTAREGAKFPI 176
Query: 198 -FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHD 241
+ PE ++ + D+WS G + ++ + G N +
Sbjct: 177 KWTAPE-AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE 220
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 32.0 bits (71), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 154 MHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK--EYNVRVASRYFKGPELLVDLQDYD 211
HRDVKP N+++ + L+D+G+A K + V + Y+ PE +
Sbjct: 156 THRDVKPENILVSADDFAY-LVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSE-SHAT 213
Query: 212 YSLDMWSLGCMFAGMIFRKEPF 233
Y D+++L C+ + P+
Sbjct: 214 YRADIYALTCVLYECLTGSPPY 235
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 32.0 bits (71), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 78/184 (42%), Gaps = 32/184 (17%)
Query: 93 PNVVKLLDIV-RDQHSKTPSLIFEYVNSTDF-------------------KVLYPTLTDY 132
PNVV LL +V +DQ S+IF Y + D + + L
Sbjct: 89 PNVVCLLGVVTKDQ---PLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPP 145
Query: 133 DIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY--- 189
D + + ++ ++Y S ++H+D+ NV++ +L +++ D GL + Y
Sbjct: 146 DFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKL-NVKISDLGLFREVYAADYYKLL 204
Query: 190 -NVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHD--QLVKI 246
N + R+ PE ++ + D+WS G + + + G+ N D ++++
Sbjct: 205 GNSLLPIRWM-APEAIM-YGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRN 262
Query: 247 AKVL 250
+VL
Sbjct: 263 RQVL 266
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 32.0 bits (71), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPG-KEYNVRVAS 195
+ ++ K + Y + ++HRD+ NV++ +++ D+GLA KEYN
Sbjct: 145 WCVQIAKGMMYLEERRLVHRDLAARNVLVKSP-NHVKITDFGLARLLEGDEKEYNADGGK 203
Query: 196 RYFKGPEL-LVDLQDYDYSLDMWSLG-CMFAGMIFRKEPF 233
K L + + + + D+WS G ++ M F +P+
Sbjct: 204 MPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPY 243
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/112 (18%), Positives = 48/112 (42%), Gaps = 6/112 (5%)
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 197
++ + Y +HRD++ N+++ L ++ D+GL EY R +++
Sbjct: 289 QIASGMAYVERMNYVHRDLRAANILVGENL-VCKVADFGLGRLIE-DNEYTARQGAKFPI 346
Query: 198 -FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
+ PE + + D+WS G + + + + G N + L ++ +
Sbjct: 347 KWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 397
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 19/105 (18%), Positives = 47/105 (44%), Gaps = 6/105 (5%)
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 197
++ + + + + +HRD++ N+++ L ++ D+GLA E R +++
Sbjct: 118 QIAEGMAFIEERNYIHRDLRAANILVSDTL-SCKIADFGLARLIE-DNEXTAREGAKFPI 175
Query: 198 -FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHD 241
+ PE ++ + D+WS G + ++ + G N +
Sbjct: 176 KWTAPE-AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE 219
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 32.0 bits (71), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/105 (18%), Positives = 47/105 (44%), Gaps = 6/105 (5%)
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 197
++ + + + + +HRD++ N+++ L ++ D+GLA E R +++
Sbjct: 117 QIAEGMAFIEERNYIHRDLRAANILVSDTL-SCKIADFGLARLIE-DNEXTAREGAKFPI 174
Query: 198 -FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHD 241
+ PE ++ + D+WS G + ++ + G N +
Sbjct: 175 KWTAPE-AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE 218
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/105 (18%), Positives = 47/105 (44%), Gaps = 6/105 (5%)
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 197
++ + + + + +HRD++ N+++ L ++ D+GLA E R +++
Sbjct: 123 QIAEGMAFIEERNYIHRDLRAANILVSDTL-SCKIADFGLARLIE-DNEXTAREGAKFPI 180
Query: 198 -FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHD 241
+ PE ++ + D+WS G + ++ + G N +
Sbjct: 181 KWTAPE-AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE 224
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/105 (18%), Positives = 47/105 (44%), Gaps = 6/105 (5%)
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 197
++ + + + + +HRD++ N+++ L ++ D+GLA E R +++
Sbjct: 117 QIAEGMAFIEERNYIHRDLRAANILVSDTL-SCKIADFGLARLIE-DAEXTAREGAKFPI 174
Query: 198 -FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHD 241
+ PE ++ + D+WS G + ++ + G N +
Sbjct: 175 KWTAPE-AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE 218
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 32.0 bits (71), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/105 (18%), Positives = 47/105 (44%), Gaps = 6/105 (5%)
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 197
++ + + + + +HRD++ N+++ L ++ D+GLA E R +++
Sbjct: 125 QIAEGMAFIEERNYIHRDLRAANILVSDTL-SCKIADFGLARLIE-DNEXTAREGAKFPI 182
Query: 198 -FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHD 241
+ PE ++ + D+WS G + ++ + G N +
Sbjct: 183 KWTAPE-AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE 226
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 32.0 bits (71), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/105 (18%), Positives = 47/105 (44%), Gaps = 6/105 (5%)
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 197
++ + + + + +HRD++ N+++ L ++ D+GLA E R +++
Sbjct: 117 QIAEGMAFIEERNYIHRDLRAANILVSDTL-SCKIADFGLARLIE-DNEXTAREGAKFPI 174
Query: 198 -FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHD 241
+ PE ++ + D+WS G + ++ + G N +
Sbjct: 175 KWTAPE-AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE 218
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 32.0 bits (71), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 69/155 (44%), Gaps = 21/155 (13%)
Query: 93 PNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELL-------KAL 145
PNVV L +V K ++ E++ + L +D ++ + +L+ +
Sbjct: 104 PNVVHLEGVV--TRGKPVMIVIEFMENGALDAF---LRKHDGQFTVIQLVGMLRGIAAGM 158
Query: 146 DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH--PGKEYNV---RVASRYFKG 200
Y G +HRD+ N++++ L ++ D+GL+ P Y ++ R+
Sbjct: 159 RYLADMGYVHRDLAARNILVNSNL-VCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRW-TA 216
Query: 201 PELLVDLQDYDYSLDMWSLG-CMFAGMIFRKEPFF 234
PE + + + + D+WS G M+ M + + P++
Sbjct: 217 PE-AIQYRKFTSASDVWSYGIVMWEVMSYGERPYW 250
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 32.0 bits (71), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/105 (18%), Positives = 47/105 (44%), Gaps = 6/105 (5%)
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 197
++ + + + + +HRD++ N+++ L ++ D+GLA E R +++
Sbjct: 126 QIAEGMAFIEERNYIHRDLRAANILVSDTL-SCKIADFGLARLIE-DNEXTAREGAKFPI 183
Query: 198 -FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHD 241
+ PE ++ + D+WS G + ++ + G N +
Sbjct: 184 KWTAPE-AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE 227
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 32.0 bits (71), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 36/199 (18%), Positives = 79/199 (39%), Gaps = 18/199 (9%)
Query: 36 DQDDYEVVRKVGRGKYSEVFEGI-NVNTNERCXXXXXXXXXXXXXXXXXXXLQNLCGGPN 94
++ D + K+G G++ EV+EG+ + + PN
Sbjct: 9 ERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 68
Query: 95 VVKLLDI-VRDQHSKTPSLIFEYVNSTDF--KVLYPTLTDYDIRYYIYELLKALDYCHSQ 151
+V+LL + R+ + Y N D+ + ++ + Y ++ A++Y +
Sbjct: 69 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 128
Query: 152 GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFY-------HPGKEYNVRVASRYFKGPELL 204
+HRD+ N ++ E +++ D+GL+ H G ++ ++ + PE L
Sbjct: 129 NFIHRDLAARNCLVG-ENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK-----WTAPESL 182
Query: 205 VDLQDYDYSLDMWSLGCMF 223
+ D+W+ G +
Sbjct: 183 A-YNKFSIKSDVWAFGVLL 200
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 31.6 bits (70), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/112 (18%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 197
++ + Y +HRD++ N+++ L ++ D+GLA E+ R +++
Sbjct: 119 QIASGMAYVERMNYVHRDLRAANILVGENL-VCKVADFGLARLIE-DNEWTARQGAKFPI 176
Query: 198 -FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
+ PE + + D+WS G + + + + G N + L ++ +
Sbjct: 177 KWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 227
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 31.6 bits (70), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 48/112 (42%), Gaps = 6/112 (5%)
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 197
++ + Y +HRD+ N+++ L ++ D+GLA EY R +++
Sbjct: 122 QIASGMAYVERMNYVHRDLAAANILVGENL-VCKVADFGLARLIE-DNEYTARQGAKFPI 179
Query: 198 -FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 248
+ PE + + D+WS G + + + + G N + L ++ +
Sbjct: 180 KWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 31.6 bits (70), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 20/98 (20%), Positives = 44/98 (44%), Gaps = 6/98 (6%)
Query: 129 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 188
+T + Y ++ A++Y + +HRD+ N ++ E +++ D+GL+ G
Sbjct: 127 VTAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG-ENHVVKVADFGLSRLMT-GDT 184
Query: 189 YNVRVASRY---FKGPELLVDLQDYDYSLDMWSLGCMF 223
Y +++ + PE L + D+W+ G +
Sbjct: 185 YTAHAGAKFPIKWTAPESLA-YNTFSIKSDVWAFGVLL 221
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 31.2 bits (69), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 197
++ +A++Y S+ +HRD+ N +++ + +++ D+GL+ Y EY S++
Sbjct: 113 DVCEAMEYLESKQFLHRDLAARNCLVNDQ-GVVKVSDFGLSR-YVLDDEYTSSRGSKFPV 170
Query: 198 -FKGPELLVDLQDYDYSLDMWSLGCMF 223
+ PE+L+ + D+W+ G +
Sbjct: 171 RWSPPEVLM-YSKFSSKSDIWAFGVLM 196
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 31.2 bits (69), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 19/87 (21%), Positives = 48/87 (55%), Gaps = 6/87 (6%)
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 197
++ +A++Y S+ +HRD+ N +++ + +++ D+GL+ + +E + V S++
Sbjct: 128 DVCEAMEYLESKQFLHRDLAARNCLVNDQ-GVVKVSDFGLSRYVLDDEETS-SVGSKFPV 185
Query: 198 -FKGPELLVDLQDYDYSLDMWSLGCMF 223
+ PE+L+ + D+W+ G +
Sbjct: 186 RWSPPEVLM-YSKFSSKSDIWAFGVLM 211
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 31.2 bits (69), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP-GKEYNVRVAS 195
+ ++ + ++Y + ++HRD+ NV++ + +++ D+GLA+ KEY+
Sbjct: 119 WCVQIAEGMNYLEDRRLVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGK 177
Query: 196 RYFKGPELLVDLQD-YDYSLDMWSLG-CMFAGMIFRKEPF 233
K L L Y + D+WS G ++ M F +P+
Sbjct: 178 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 217
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP-GKEYNVRVASRYF 198
++ K + Y G++HR++ NV++ ++++ D+G+A+ P K+ A
Sbjct: 123 QIAKGMYYLEEHGMVHRNLAARNVLLKSP-SQVQVADFGVADLLPPDDKQLLYSEAKTPI 181
Query: 199 KGPEL-LVDLQDYDYSLDMWSLG-CMFAGMIFRKEPF 233
K L + Y + D+WS G ++ M F EP+
Sbjct: 182 KWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPY 218
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Query: 140 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP-GKEYNVRVASRYF 198
++ K + Y G++HR++ NV++ ++++ D+G+A+ P K+ A
Sbjct: 141 QIAKGMYYLEEHGMVHRNLAARNVLLKSP-SQVQVADFGVADLLPPDDKQLLYSEAKTPI 199
Query: 199 KGPEL-LVDLQDYDYSLDMWSLG-CMFAGMIFRKEPF 233
K L + Y + D+WS G ++ M F EP+
Sbjct: 200 KWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPY 236
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/101 (18%), Positives = 47/101 (46%), Gaps = 15/101 (14%)
Query: 127 PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPG 186
P L D+ ++ + + + + +HRD++ N+++ L ++ D+GLA G
Sbjct: 278 PKLIDFSA-----QIAEGMAFIEQRNYIHRDLRAANILVSASL-VCKIADFGLARV---G 328
Query: 187 KEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMI 227
++ ++ + PE ++ + D+WS G + ++
Sbjct: 329 AKFPIK-----WTAPE-AINFGSFTIKSDVWSFGILLMEIV 363
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP-GKEYNVRVAS 195
+ ++ K ++Y + ++HRD+ NV++ + +++ D+G A+ KEY+
Sbjct: 124 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP-QHVKITDFGRAKLLGAEEKEYHAEGGK 182
Query: 196 RYFKGPELLVDLQD-YDYSLDMWSLG-CMFAGMIFRKEPF 233
K L L Y + D+WS G ++ M F +P+
Sbjct: 183 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 222
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP-GKEYNVRVAS 195
+ ++ K ++Y + ++HRD+ NV++ + +++ D+G A+ KEY+
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP-QHVKITDFGRAKLLGAEEKEYHAEGGK 180
Query: 196 RYFKGPELLVDLQD-YDYSLDMWSLG-CMFAGMIFRKEPF 233
K L L Y + D+WS G ++ M F +P+
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP-GKEYNVRVAS 195
+ ++ K ++Y + ++HRD+ NV++ + +++ D+G A+ KEY+
Sbjct: 129 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP-QHVKITDFGRAKLLGAEEKEYHAEGGK 187
Query: 196 RYFKGPELLVDLQD-YDYSLDMWSLG-CMFAGMIFRKEPF 233
K L L Y + D+WS G ++ M F +P+
Sbjct: 188 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 227
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
Query: 137 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP-GKEYNVRVAS 195
+ ++ K ++Y + ++HRD+ NV++ + +++ D+G A+ KEY+
Sbjct: 124 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP-QHVKITDFGRAKLLGAEEKEYHAEGGK 182
Query: 196 RYFKGPELLVDLQD-YDYSLDMWSLG-CMFAGMIFRKEPF 233
K L L Y + D+WS G ++ M F +P+
Sbjct: 183 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 222
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.325 0.140 0.435
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,929,457
Number of Sequences: 62578
Number of extensions: 416316
Number of successful extensions: 3744
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 772
Number of HSP's successfully gapped in prelim test: 266
Number of HSP's that attempted gapping in prelim test: 1388
Number of HSP's gapped (non-prelim): 1463
length of query: 338
length of database: 14,973,337
effective HSP length: 99
effective length of query: 239
effective length of database: 8,778,115
effective search space: 2097969485
effective search space used: 2097969485
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 52 (24.6 bits)