BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 019645
         (338 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q4LDF9|OEP37_PEA Outer envelope pore protein 37, chloroplastic OS=Pisum sativum
           GN=OEP37 PE=1 SV=1
          Length = 329

 Score =  483 bits (1242), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 231/329 (70%), Positives = 274/329 (83%), Gaps = 11/329 (3%)

Query: 14  PNHMVPPPLDPQPQPSPSPPQPQQQRTSSLFSFPSRPALRVTSEFDSDSSIFLHKISCKL 73
           PN+   P +DPQP PS +P       +  +FSFP RPALR+T+EFDS+S++F HKISCK 
Sbjct: 8   PNY--SPEVDPQPLPSTNPIH-----SRPIFSFPKRPALRITTEFDSESTVFFHKISCKF 60

Query: 74  FDSLAKLKVSFQNDNKGQIFEPQLAFTSKHLSLHYDLEEQNAFVKSSFDVGPKLHFRAAH 133
            DSLAKLK +F N++KG+I EPQ++F SK+LSLHYDLE+ +A VKSS DVGPKL     H
Sbjct: 61  LDSLAKLKFAFHNNSKGEIAEPQISFVSKYLSLHYDLEDHSALVKSSVDVGPKLKLIGTH 120

Query: 134 DVKAQQGEVGVVANLGDPGYALELSSPVPYVGYPKATFKFPLGEVSLVE----REEEEVK 189
           DVKAQQGEV +VANL DPGYAL+LS+P+P +  PKATFKFP GE+SL E     E+E+VK
Sbjct: 121 DVKAQQGEVTMVANLDDPGYALQLSTPLPSIALPKATFKFPQGEISLQEINDHDEDEQVK 180

Query: 190 KTLSISGIAKGQILNGICTAQYEEEDLKLRYCYKDEALSFIPTISLPSNALSFALKRQFS 249
            +LS+SG  KGQ+L G+CTAQY++++ KLRY YKD+ +SF+P +SLPSNALSFA KR+F 
Sbjct: 181 NSLSVSGTLKGQLLKGLCTAQYKDQEFKLRYRYKDDEMSFLPILSLPSNALSFAFKRRFG 240

Query: 250 PSDKLSYWYNFDSNYWSAVYKHTYGKDFKFKAGYDSEVRLGWASLWVGDEGGKARTAPMK 309
           PSDKLSYWYN DSNYWSAVYKHTYG+DFKFKAGYDSEVRLGWASLWVGDEGGKA+TAPMK
Sbjct: 241 PSDKLSYWYNCDSNYWSAVYKHTYGEDFKFKAGYDSEVRLGWASLWVGDEGGKAKTAPMK 300

Query: 310 MKVQFMLQVPQDDIKSSALMFRVKKRWDV 338
           MKVQFMLQVPQDDIKSS LMFRVKKRWD+
Sbjct: 301 MKVQFMLQVPQDDIKSSVLMFRVKKRWDI 329


>sp|O80565|OEP37_ARATH Outer envelope pore protein 37, chloroplastic OS=Arabidopsis
           thaliana GN=OEP37 PE=1 SV=2
          Length = 343

 Score =  455 bits (1170), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 227/344 (65%), Positives = 277/344 (80%), Gaps = 7/344 (2%)

Query: 1   MVEPSPPSPSLQIPNHMVPPPLDPQPQPSPSPPQPQQQRTSSLFSF---PSRPALRVTSE 57
           M +PS  +P+L  P     P    Q Q   S   P  +   S  SF    +RP LRVTSE
Sbjct: 1   MADPSSQNPNLATPPPPSSPSPTHQIQSGTSELSPPSRPPCSTLSFLKTANRPKLRVTSE 60

Query: 58  FDSDSSIFLHKISCKLFDSLAKLKVSFQNDNKGQIFEPQLAFTSKHLSLHYDLEEQNAFV 117
           FDSDS +FL+K+SCKLFD+LAKLK+SFQN+++ +I +PQ++FTSKH+S+ YD+EE+N F+
Sbjct: 61  FDSDSLLFLNKVSCKLFDNLAKLKLSFQNNSQREISQPQVSFTSKHVSVLYDVEEKNTFI 120

Query: 118 KSSFDVGPKLHFRAAHDVKAQQGEVGVVANLGDPGYALELSSPVPYVGYPKATFKFPLGE 177
           KS+ DV P+L  RA H+VKAQQGEV + ANL +PGY+LELSSPVP +GYP+AT KFPLGE
Sbjct: 121 KSTLDVHPRLQLRALHNVKAQQGEVAMEANLTEPGYSLELSSPVP-IGYPRATLKFPLGE 179

Query: 178 VSLVEREEEEVK---KTLSISGIAKGQILNGICTAQYEEEDLKLRYCYKDEALSFIPTIS 234
           +SL E++EEE +   +TLS++GI K Q++NG+CTA Y +E+L+LRY YKD+ALSFIP+IS
Sbjct: 180 ISLQEKDEEEEEKQKRTLSVNGILKRQVMNGVCTALYTDEELRLRYAYKDDALSFIPSIS 239

Query: 235 LPSNALSFALKRQFSPSDKLSYWYNFDSNYWSAVYKHTYGKDFKFKAGYDSEVRLGWASL 294
           LPSNA SFA KR+FSPSDKLSYWYNFDSN WSAVYK TYGKD+K KAGYDS+VRLGWASL
Sbjct: 240 LPSNAASFAFKRRFSPSDKLSYWYNFDSNMWSAVYKRTYGKDYKLKAGYDSDVRLGWASL 299

Query: 295 WVGDEGGKARTAPMKMKVQFMLQVPQDDIKSSALMFRVKKRWDV 338
           WVGDE GK +T PMKMKVQFMLQVPQDDIKSS LMFRVKKRWD+
Sbjct: 300 WVGDEAGKVKTTPMKMKVQFMLQVPQDDIKSSVLMFRVKKRWDI 343


>sp|Q6A037|N4BP1_MOUSE NEDD4-binding protein 1 OS=Mus musculus GN=N4bp1 PE=1 SV=2
          Length = 893

 Score = 32.0 bits (71), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 14/87 (16%)

Query: 3   EPSPPSPSLQIPNHMVPPPLDPQPQPSPSPPQPQQQRTSSLFSFPSR------PALRVTS 56
           +P   SPS Q+ N+   PP  P+ Q S SP  PQQ   ++L + PS       PA R ++
Sbjct: 792 DPGFRSPSTQVANNSHQPP--PRIQTSSSPWLPQQSHFTALATLPSMQQNPPLPAQRSSA 849

Query: 57  EFDSDSSIFLHKISCKLF-DSLAKLKV 82
           E        L +   K+F DS  KLK+
Sbjct: 850 ETSE-----LREALLKIFPDSEQKLKI 871


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.316    0.133    0.400 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 132,917,304
Number of Sequences: 539616
Number of extensions: 5976408
Number of successful extensions: 49352
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 252
Number of HSP's successfully gapped in prelim test: 332
Number of HSP's that attempted gapping in prelim test: 38912
Number of HSP's gapped (non-prelim): 7653
length of query: 338
length of database: 191,569,459
effective HSP length: 118
effective length of query: 220
effective length of database: 127,894,771
effective search space: 28136849620
effective search space used: 28136849620
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)