Query 019645
Match_columns 338
No_of_seqs 50 out of 52
Neff 2.7
Searched_HMMs 13730
Date Mon Mar 25 04:56:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019645.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/019645hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1wspa1 d.15.1.8 (A:750-832) A 55.6 3.2 0.00023 31.0 2.6 45 214-262 2-47 (83)
2 d1hn0a2 b.18.1.17 (A:25-234) C 34.3 13 0.00092 31.9 3.3 37 239-299 100-136 (210)
3 d1vjka_ d.15.3.1 (A:) Molybdop 21.7 17 0.0012 25.1 1.5 12 223-234 77-88 (88)
4 d1dkua1 c.61.1.2 (A:8-166) Pho 20.9 17 0.0012 28.9 1.5 52 145-196 5-56 (159)
5 d2exha1 b.29.1.23 (A:325-535) 20.9 69 0.005 24.4 5.2 32 234-268 129-162 (211)
6 d2c4ka1 c.61.1.2 (A:7-166) PRP 17.0 32 0.0023 27.3 2.3 27 169-195 32-58 (160)
7 d2fmma1 b.34.13.2 (A:108-175) 16.4 55 0.004 22.9 3.3 38 195-232 4-42 (68)
8 d1y7ba1 b.29.1.23 (A:325-534) 15.3 85 0.0062 23.8 4.5 32 235-269 130-163 (210)
9 d2q3za1 b.1.18.9 (A:15-145) Tr 13.8 73 0.0053 24.3 3.6 29 262-290 71-99 (131)
10 d1vcaa2 b.1.1.4 (A:1-90) Vascu 13.3 1.7E+02 0.012 18.9 5.5 58 155-212 19-76 (90)
No 1
>d1wspa1 d.15.1.8 (A:750-832) Axin 1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=55.59 E-value=3.2 Score=30.98 Aligned_cols=45 Identities=20% Similarity=0.447 Sum_probs=34.7
Q ss_pred ccceeeeeeecCceeeeeeccCCCcccccc-cccccCCCCCceeEEeccC
Q 019645 214 EDLKLRYCYKDEALSFIPTISLPSNALSFA-LKRQFSPSDKLSYWYNFDS 262 (338)
Q Consensus 214 ~~~~lrY~yKD~els~iPsiSlPsnalS~a-FKR~f~psdKlSY~ynfdt 262 (338)
|++.+-|.+-||+.-+. +++|...+.|+ ||+.|.- +=.|+|-|-+
T Consensus 2 ~~~~v~Y~~~~e~~Py~--~~ip~~~iTL~dFK~~~~~--~G~y~f~FK~ 47 (83)
T d1wspa1 2 DSIVVAYYFCGEPIPYR--TLVRGRAVTLGQFKELLTK--KGSYRYYFKK 47 (83)
T ss_dssp CCEEEEEEETTCSSCEE--EEETTSCCBHHHHHHHCCS--CSCEEEEEEE
T ss_pred CceEEEEEeCCCCCceE--EeccCCcccHHHHHHhcCC--CCcEEEEEEe
Confidence 46778888888888874 78889988885 9999942 2378888864
No 2
>d1hn0a2 b.18.1.17 (A:25-234) Chondroitin ABC lyase I, N-terminal domain {Proteus vulgaris [TaxId: 585]}
Probab=34.31 E-value=13 Score=31.90 Aligned_cols=37 Identities=14% Similarity=0.318 Sum_probs=27.9
Q ss_pred ccccccccccCCCCCceeEEeccCcceeeeeeeecCcceeEeeecCcccceeeeeeeeecC
Q 019645 239 ALSFALKRQFSPSDKLSYWYNFDSNYWSAVYKHTYGKDFKFKAGYDSEVRLGWASLWVGDE 299 (338)
Q Consensus 239 alS~aFKR~f~psdKlSY~ynfdt~~WsavyK~~~~k~~K~KaGYdS~vrlgWaS~WvG~e 299 (338)
.+-|.|+|.+.+.++.+|++.| +.+| -||.-+||+=|
T Consensus 100 ~l~fefg~~l~~~~~~~~~F~~-------------------~LnF-----tGWRavWV~y~ 136 (210)
T d1hn0a2 100 YLTIDFGEKLISTSEAQAGFKV-------------------KLDF-----TGWRAVGVSLN 136 (210)
T ss_dssp EEEEEEESSCCTTCCCSEEEEE-------------------ECCC-----CEEEEEEEETT
T ss_pred eEEEEEccccCCCCccceeeEE-------------------Eeec-----cchhhheeehh
Confidence 3567899999999999998753 3333 38999999863
No 3
>d1vjka_ d.15.3.1 (A:) Molybdopterin synthase subunit MoaD {Pyrococcus furiosus [TaxId: 2261]}
Probab=21.65 E-value=17 Score=25.10 Aligned_cols=12 Identities=17% Similarity=0.548 Sum_probs=9.3
Q ss_pred ecCceeeeeecc
Q 019645 223 KDEALSFIPTIS 234 (338)
Q Consensus 223 KD~els~iPsiS 234 (338)
.+||+.|+|-||
T Consensus 77 ~gDevai~PPVs 88 (88)
T d1vjka_ 77 DGDVVGVFPPVS 88 (88)
T ss_dssp TTCEEEEESCC-
T ss_pred CCCEEEEeCCCC
Confidence 457999999886
No 4
>d1dkua1 c.61.1.2 (A:8-166) Phosphoribosylpyrophosphate synthetase {Bacillus subtilis [TaxId: 1423]}
Probab=20.91 E-value=17 Score=28.94 Aligned_cols=52 Identities=19% Similarity=0.086 Sum_probs=27.4
Q ss_pred EEecCCCCceeeecCCCCCCCCCcEEEEecCcceeeeeeeehhccceeEEec
Q 019645 145 VANLGDPGYALELSSPVPYVGYPKATFKFPLGEVSLVEREEEEVKKTLSISG 196 (338)
Q Consensus 145 vA~LgDP~yk~ELSS~vP~~glPRat~~FP~Gevs~ee~~~ee~~r~lsv~G 196 (338)
++--+++.-+.+|+..+--.-.+--.=+||+||+.++-.+.-.++.+.-|..
T Consensus 5 ~~gss~~~La~~ia~~Lg~~l~~~~~~~FpDGE~~v~i~~~vrg~dv~ivqs 56 (159)
T d1dkua1 5 FSLNSNPELAKEIADIVGVQLGKCSVTRFSDGEVQINIEESIRGCDCYIIQS 56 (159)
T ss_dssp EECSSCHHHHHHHHHHHTCCCCCEEEEECTTSCEEEEECSCCTTCEEEEECC
T ss_pred EeCCCCHHHHHHHHHHhCCCccceEEEEcCCCCEEEEeecCCCCCceEEEec
Confidence 3333344444444443322222333457999999998655544555555543
No 5
>d2exha1 b.29.1.23 (A:325-535) Beta-D-xylosidase C-terminal domain {Geobacillus stearothermophilus [TaxId: 1422]}
Probab=20.87 E-value=69 Score=24.41 Aligned_cols=32 Identities=22% Similarity=0.505 Sum_probs=22.4
Q ss_pred cCCC--cccccccccccCCCCCceeEEeccCcceeee
Q 019645 234 SLPS--NALSFALKRQFSPSDKLSYWYNFDSNYWSAV 268 (338)
Q Consensus 234 SlPs--nalS~aFKR~f~psdKlSY~ynfdt~~Wsav 268 (338)
.+|+ +.+-|...++ .+++++.|..|...|..+
T Consensus 129 ~~~~~~~~v~Lri~~~---~~~~~f~yS~dG~~w~~l 162 (211)
T d2exha1 129 VVPDDIEYVYLRVTVQ---ATTYKYSYSFDGMNWIDL 162 (211)
T ss_dssp ECCTTCCCEEEEEEEE---TTEEEEEEESSSSCEEEC
T ss_pred eccCCCCEEEEEEEEc---CCEEEEEEECCCCceEEe
Confidence 3554 4455666665 568999999999999654
No 6
>d2c4ka1 c.61.1.2 (A:7-166) PRPP synthetase-associated protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=17.02 E-value=32 Score=27.31 Aligned_cols=27 Identities=15% Similarity=0.182 Sum_probs=18.0
Q ss_pred EEEEecCcceeeeeeeehhccceeEEe
Q 019645 169 ATFKFPLGEVSLVEREEEEVKKTLSIS 195 (338)
Q Consensus 169 at~~FP~Gevs~ee~~~ee~~r~lsv~ 195 (338)
-.-+||+||+.++-.+.-.++.+.-|.
T Consensus 32 ~~~~F~DGE~~v~i~e~vrg~~V~ivq 58 (160)
T d2c4ka1 32 VVYQETNGETRVEIKESVRGQDIFIIQ 58 (160)
T ss_dssp EEEECTTSCEEEEECSCCTTCCEEEEC
T ss_pred EEEECCCCCeeeccCccccCCceEEEe
Confidence 345899999999855543445555444
No 7
>d2fmma1 b.34.13.2 (A:108-175) Heterochromatin protein 1, HP1 {Mouse (Mus musculus), HP1 beta (MOD1, M31) [TaxId: 10090]}
Probab=16.38 E-value=55 Score=22.88 Aligned_cols=38 Identities=21% Similarity=0.355 Sum_probs=32.4
Q ss_pred eccccccccCceEEEEeecccceeeeeeec-Cceeeeee
Q 019645 195 SGIAKGQILNGICTAQYEEEDLKLRYCYKD-EALSFIPT 232 (338)
Q Consensus 195 ~G~~k~~~lnG~~tA~y~d~~~~lrY~yKD-~els~iPs 232 (338)
+|+-+|--+.-|+-|--.++++-+==++|| +|+-+||+
T Consensus 4 ~Gf~RGl~~ekIig~t~~~gel~flvkwk~~d~~dlVp~ 42 (68)
T d2fmma1 4 RGFARGLEPERIIGATDSSGELMFLMKWKNSDEADLVPA 42 (68)
T ss_dssp CGGGGCCCEEEEEEEEEETTEEEEEEEETTCSCCEEEEH
T ss_pred cccccCCCccEEEEeEccCCeEEEEEEECCCChhhheeH
Confidence 688888888888888888888888888999 89999986
No 8
>d1y7ba1 b.29.1.23 (A:325-534) Beta-D-xylosidase C-terminal domain {Clostridium acetobutylicum [TaxId: 1488]}
Probab=15.27 E-value=85 Score=23.83 Aligned_cols=32 Identities=25% Similarity=0.614 Sum_probs=21.5
Q ss_pred CCCcc--cccccccccCCCCCceeEEeccCcceeeee
Q 019645 235 LPSNA--LSFALKRQFSPSDKLSYWYNFDSNYWSAVY 269 (338)
Q Consensus 235 lPsna--lS~aFKR~f~psdKlSY~ynfdt~~Wsavy 269 (338)
+|..+ +-|-..+. .+++++.|..|...|..+-
T Consensus 130 ~~~~~~~v~Lri~~~---~~~~~f~YS~dG~~w~~ig 163 (210)
T d1y7ba1 130 IPKDVEYIHLKVEVR---VETYQYSYSFDGINWSKVP 163 (210)
T ss_dssp CCTTCSCEEEEEEEE---TTEEEEEEESSSSSCEEEE
T ss_pred cCCCCcEEEEEEEEE---CCEEEEEEECCCCceEEee
Confidence 45443 44544444 5689999999999996653
No 9
>d2q3za1 b.1.18.9 (A:15-145) Transglutaminase N-terminal domain {Human (Homo sapiens), tissue isozyme [TaxId: 9606]}
Probab=13.77 E-value=73 Score=24.32 Aligned_cols=29 Identities=10% Similarity=0.236 Sum_probs=13.8
Q ss_pred CcceeeeeeeecCcceeEeeecCccccee
Q 019645 262 SNYWSAVYKHTYGKDFKFKAGYDSEVRLG 290 (338)
Q Consensus 262 t~~WsavyK~~~~k~~K~KaGYdS~vrlg 290 (338)
...|+|.....-++...+..==-.+.-+|
T Consensus 71 ~~~W~a~v~~~~~~~v~v~V~spa~A~VG 99 (131)
T d2q3za1 71 EGDWTATVVDQQDCTLSLQLTTPANAPIG 99 (131)
T ss_dssp TTSCEEEEEEECSSEEEEEEECCTTCCCE
T ss_pred CCCceEEEEecCCCEEEEEEeCCCCCcEE
Confidence 34455555555555444444433333333
No 10
>d1vcaa2 b.1.1.4 (A:1-90) Vascular cell adhesion molecule-1 (VCAM-1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=13.31 E-value=1.7e+02 Score=18.93 Aligned_cols=58 Identities=17% Similarity=0.216 Sum_probs=38.8
Q ss_pred eeecCCCCCCCCCcEEEEecCcceeeeeeeehhccceeEEeccccccccCceEEEEee
Q 019645 155 LELSSPVPYVGYPKATFKFPLGEVSLVEREEEEVKKTLSISGIAKGQILNGICTAQYE 212 (338)
Q Consensus 155 ~ELSS~vP~~glPRat~~FP~Gevs~ee~~~ee~~r~lsv~G~~k~~~lnG~~tA~y~ 212 (338)
+.|.+.+...-.|.++-....+.+.-.+........+|.|..+-..+-.+=.|+|.-.
T Consensus 19 v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~ 76 (90)
T d1vcaa2 19 VSLTCSTTGCESPFFSWRTQIDSPLNGKVTNEGTTSTLTMNPVSFGNEHSYLCTATCE 76 (90)
T ss_dssp EEEEEEEESCSSCEEEEEETTCCCCSSEEEEETTEEEEEESSCCGGGCSEEEEEEEET
T ss_pred EEEEEeccCCCCceEEEEecCccceeeeeeeecCCcEEEEecccccccceEEEEEEeC
Confidence 4555555444456666667777665544444455778999999888877777888643
Done!