Your job contains 1 sequence.
>019646
MATCGTTPSSLMLTYAATPVHPQDLTPSLSLLSFKPSKTAAFSLCTNLSVRGGERRASKW
LDLYPLRQNKNGLPGHMLAAASAVEADTDLATDDVEDDTQGGTEGATATATATISTKPKK
GKAALPLKRDRMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQG
EKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPK
AGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKP
KGAKGVYWKSAYICSSMGPSIRLNIKEMLDYKLPSNF
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 019646
(337 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2087388 - symbol:EMB3126 "EMBRYO DEFECTIVE 312... 914 1.1e-95 2
TIGR_CMR|CJE_0525 - symbol:CJE_0525 "ribosomal protein L1... 531 4.0e-51 1
TIGR_CMR|DET_0992 - symbol:DET_0992 "ribosomal protein L1... 523 2.8e-50 1
TIGR_CMR|CHY_2322 - symbol:CHY_2322 "ribosomal protein L1... 520 5.8e-50 1
TIGR_CMR|GSU_2866 - symbol:GSU_2866 "ribosomal protein L1... 520 5.8e-50 1
UNIPROTKB|Q06797 - symbol:rplA "50S ribosomal protein L1"... 519 7.4e-50 1
TIGR_CMR|BA_0098 - symbol:BA_0098 "ribosomal protein L1" ... 518 9.5e-50 1
TIGR_CMR|SPO_3513 - symbol:SPO_3513 "ribosomal protein L1... 502 4.7e-48 1
TIGR_CMR|CBU_0227 - symbol:CBU_0227 "ribosomal protein L1... 488 1.4e-46 1
UNIPROTKB|P96932 - symbol:rplA "50S ribosomal protein L1"... 481 7.9e-46 1
TIGR_CMR|SO_0221 - symbol:SO_0221 "ribosomal protein L1" ... 470 1.2e-44 1
UNIPROTKB|P0A7L0 - symbol:rplA "50S ribosomal subunit pro... 465 3.9e-44 1
TIGR_CMR|CPS_4772 - symbol:CPS_4772 "ribosomal protein L1... 449 1.9e-42 1
UNIPROTKB|Q9KV33 - symbol:rplA "50S ribosomal protein L1"... 444 6.6e-42 1
TIGR_CMR|VC_0325 - symbol:VC_0325 "ribosomal protein L1" ... 444 6.6e-42 1
TIGR_CMR|APH_1027 - symbol:APH_1027 "ribosomal protein L1... 440 1.7e-41 1
TIGR_CMR|ECH_0955 - symbol:ECH_0955 "ribosomal protein L1... 425 6.8e-40 1
TAIR|locus:2041519 - symbol:AT2G42710 species:3702 "Arabi... 393 1.7e-36 1
ASPGD|ASPL0000012808 - symbol:AN8225 species:162425 "Emer... 238 4.4e-20 1
TIGR_CMR|NSE_0681 - symbol:NSE_0681 "ribosomal protein L1... 207 8.6e-17 1
POMBASE|SPAC1610.02c - symbol:SPAC1610.02c "mitochondrial... 206 1.1e-16 1
SGD|S000002523 - symbol:MRPL1 "Mitochondrial ribosomal pr... 192 4.3e-14 1
GENEDB_PFALCIPARUM|PFL0500w - symbol:PFL0500w "50S riboso... 169 1.5e-10 1
UNIPROTKB|Q8I5U9 - symbol:PFL0500w "Mitochondrial ribosom... 169 1.5e-10 1
ZFIN|ZDB-GENE-060526-311 - symbol:mrpl1 "mitochondrial ri... 161 1.2e-09 1
POMBASE|SPCC1183.08c - symbol:rpl101 "60S ribosomal prote... 150 2.5e-09 1
POMBASE|SPBC30D10.18c - symbol:rpl102 "60S ribosomal prot... 145 1.5e-08 1
FB|FBgn0037566 - symbol:mRpL1 "mitochondrial ribosomal pr... 147 7.1e-08 1
UNIPROTKB|E1C7D6 - symbol:MRPL1 "Uncharacterized protein"... 145 1.1e-07 1
UNIPROTKB|G4MTC2 - symbol:MGG_04696 "Ribosomal protein" s... 134 4.7e-07 1
UNIPROTKB|Q9BYD6 - symbol:MRPL1 "39S ribosomal protein L1... 137 8.7e-07 1
ASPGD|ASPL0000057044 - symbol:AN1122 species:162425 "Emer... 131 1.1e-06 1
UNIPROTKB|E2RQ67 - symbol:MRPL1 "Uncharacterized protein"... 136 1.2e-06 1
CGD|CAL0000752 - symbol:orf19.5698 species:5476 "Candida ... 131 2.7e-06 1
UNIPROTKB|F1RYS1 - symbol:MRPL1 "Uncharacterized protein"... 131 2.9e-06 1
UNIPROTKB|A6QPQ5 - symbol:MRPL1 "39S ribosomal protein L1... 132 3.3e-06 1
DICTYBASE|DDB_G0276871 - symbol:rpl10a "S60 ribosomal pro... 127 3.6e-06 1
CGD|CAL0005037 - symbol:RPL10A species:5476 "Candida albi... 126 4.9e-06 1
ZFIN|ZDB-GENE-030131-2025 - symbol:rpl10a "ribosomal prot... 124 8.3e-06 1
UNIPROTKB|D4AC74 - symbol:Mrpl1 "Protein Mrpl1" species:1... 126 1.7e-05 1
MGI|MGI:2137202 - symbol:Mrpl1 "mitochondrial ribosomal p... 122 5.0e-05 1
RGD|1306850 - symbol:Mrpl1 "mitochondrial ribosomal prote... 120 7.8e-05 1
UNIPROTKB|Q5E9E6 - symbol:RPL10A "60S ribosomal protein L... 116 8.1e-05 1
UNIPROTKB|E2R9V0 - symbol:RPL10A "Ribosomal protein" spec... 116 8.1e-05 1
UNIPROTKB|P62906 - symbol:RPL10A "60S ribosomal protein L... 116 8.1e-05 1
RGD|620497 - symbol:Rpl10a "ribosomal protein L10A" speci... 116 8.1e-05 1
SGD|S000006141 - symbol:RPL1A "Ribosomal 60S subunit prot... 115 0.00011 1
SGD|S000003103 - symbol:RPL1B "Ribosomal 60S subunit prot... 115 0.00011 1
FB|FBgn0036213 - symbol:RpL10Ab "Ribosomal protein L10Ab"... 114 0.00014 1
GENEDB_PFALCIPARUM|PF14_0391 - symbol:PF14_0391 "ribosoma... 114 0.00014 1
UNIPROTKB|Q8IL58 - symbol:PF14_0391 "60S ribosomal protei... 114 0.00014 1
UNIPROTKB|E1BKD0 - symbol:E1BKD0 "Ribosomal protein" spec... 112 0.00025 1
MGI|MGI:1343877 - symbol:Rpl10a "ribosomal protein L10A" ... 111 0.00032 1
UNIPROTKB|G3X7N2 - symbol:G3X7N2 "Ribosomal protein" spec... 109 0.00056 1
RGD|1566137 - symbol:RGD1566137 "similar to ribosomal pro... 108 0.00073 1
RGD|1559639 - symbol:RGD1559639 "similar to ribosomal pro... 107 0.00096 1
TAIR|locus:2176337 - symbol:AT5G22440 species:3702 "Arabi... 107 0.00096 1
>TAIR|locus:2087388 [details] [associations]
symbol:EMB3126 "EMBRYO DEFECTIVE 3126" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005840 "ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0009535 "chloroplast
thylakoid membrane" evidence=IDA] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0006098 "pentose-phosphate
shunt" evidence=RCA] [GO:0006354 "DNA-dependent transcription,
elongation" evidence=RCA] [GO:0009073 "aromatic amino acid family
biosynthetic process" evidence=RCA] [GO:0009902 "chloroplast
relocation" evidence=RCA] [GO:0010027 "thylakoid membrane
organization" evidence=RCA] [GO:0015979 "photosynthesis"
evidence=RCA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=RCA] [GO:0019288 "isopentenyl diphosphate biosynthetic
process, mevalonate-independent pathway" evidence=RCA] [GO:0034660
"ncRNA metabolic process" evidence=RCA] [GO:0042793 "transcription
from plastid promoter" evidence=RCA] [GO:0045036 "protein targeting
to chloroplast" evidence=RCA] InterPro:IPR002143 InterPro:IPR005878
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 Prosite:PS01199 GO:GO:0005634 GO:GO:0009570
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006412 GO:GO:0009941
EMBL:AL163818 GO:GO:0003735 GO:GO:0009535 GO:GO:0019843
GO:GO:0015934 SUPFAM:SSF56808 UniGene:At.24203 UniGene:At.69654
eggNOG:COG0081 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 EMBL:X90855 EMBL:BT001191 EMBL:AY133519
EMBL:AY059929 EMBL:AY053410 IPI:IPI00522851 PIR:T49190 PIR:T51934
RefSeq:NP_191908.1 HSSP:Q5SLP7 ProteinModelPortal:Q9LY66 SMR:Q9LY66
STRING:Q9LY66 PaxDb:Q9LY66 PRIDE:Q9LY66 ProMEX:Q9LY66
EnsemblPlants:AT3G63490.1 GeneID:825524 KEGG:ath:AT3G63490
GeneFarm:61 TAIR:At3g63490 HOGENOM:HOG000207015 InParanoid:Q9LY66
OMA:AKGRYVK PhylomeDB:Q9LY66 ProtClustDB:CLSN2914724
Genevestigator:Q9LY66 TIGRFAMs:TIGR01169 Uniprot:Q9LY66
Length = 346
Score = 914 (326.8 bits), Expect = 1.1e-95, Sum P(2) = 1.1e-95
Identities = 173/203 (85%), Positives = 193/203 (95%)
Query: 133 SSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGAD 192
++T+F E+ EAHFRLNIDPKYNDQQLRATVSLPKGTG++V VAVLAQGEK +EAK+AGAD
Sbjct: 142 ANTRFVESVEAHFRLNIDPKYNDQQLRATVSLPKGTGQTVIVAVLAQGEKVDEAKSAGAD 201
Query: 193 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAI 252
+VG DDLIEQIKGGFMEFDKLIASPDMMVKVA LGKILGPRGLMPNPKAGTVT NIPQAI
Sbjct: 202 IVGSDDLIEQIKGGFMEFDKLIASPDMMVKVAGLGKILGPRGLMPNPKAGTVTANIPQAI 261
Query: 253 EEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAY 312
EEFKKGKVE+RADKTGIVHIPFGK +F+E+DLLINFLAAVKS+E NKPKGAKGVYWKSA+
Sbjct: 262 EEFKKGKVEFRADKTGIVHIPFGKVNFTEEDLLINFLAAVKSVETNKPKGAKGVYWKSAH 321
Query: 313 ICSSMGPSIRLNIKEMLDYKLPS 335
ICSSMGPSI+LNI+EM+D+K P+
Sbjct: 322 ICSSMGPSIKLNIREMIDFKPPT 344
Score = 57 (25.1 bits), Expect = 1.1e-95, Sum P(2) = 1.1e-95
Identities = 14/24 (58%), Positives = 14/24 (58%)
Query: 1 MATCGTTPSSLMLTYAATPVHPQD 24
MA C T SSLML YAA QD
Sbjct: 1 MAACATH-SSLMLAYAAASTRSQD 23
>TIGR_CMR|CJE_0525 [details] [associations]
symbol:CJE_0525 "ribosomal protein L1" species:195099
"Campylobacter jejuni RM1221" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR002143
InterPro:IPR005878 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199
GO:GO:0006417 GO:GO:0006412 EMBL:CP000025 GenomeReviews:CP000025_GR
GO:GO:0003735 GO:GO:0000049 GO:GO:0019843 GO:GO:0015934
SUPFAM:SSF56808 eggNOG:COG0081 Gene3D:3.30.190.20
Gene3D:3.40.50.790 InterPro:IPR023673 HOGENOM:HOG000207015
OMA:AKGRYVK TIGRFAMs:TIGR01169 KO:K02863 ProtClustDB:PRK05424
HAMAP:MF_01318_B RefSeq:YP_178543.1 ProteinModelPortal:Q5HVZ2
SMR:Q5HVZ2 STRING:Q5HVZ2 GeneID:3231286 KEGG:cjr:CJE0525
PATRIC:20042772 BioCyc:CJEJ195099:GJC0-540-MONOMER Uniprot:Q5HVZ2
Length = 233
Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
Identities = 102/201 (50%), Positives = 140/201 (69%)
Query: 132 MSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGA 191
+ S KF ET E +LN+DP++ DQ +R +V LP GTGK V+VAV+A+ K +EAKNAGA
Sbjct: 33 LKSAKFDETVEIALKLNVDPRHADQMVRGSVVLPAGTGKKVRVAVIAKDAKADEAKNAGA 92
Query: 192 DLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQA 251
D+VG DDL+E+I+ G M FD LIA+P++M V +G+ILGP+GLMPNPK GTVT ++ QA
Sbjct: 93 DIVGSDDLVEEIQKGNMNFDVLIATPNLMGLVGKVGRILGPKGLMPNPKTGTVTMDVAQA 152
Query: 252 IEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSA 311
+ K G+V +R DK G +H GK FS++ L N VK+I +KP AKG Y K+A
Sbjct: 153 VNNAKSGQVNFRVDKQGNIHAGLGKVSFSKEQLWDNVSTFVKAINKHKPAAAKGRYIKNA 212
Query: 312 YICSSMGPSIRLNIKEMLDYK 332
+ +M PS++L +E+LD K
Sbjct: 213 ALSLTMSPSVKLETQELLDMK 233
>TIGR_CMR|DET_0992 [details] [associations]
symbol:DET_0992 "ribosomal protein L1" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR002143 InterPro:IPR005878 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006417 GO:GO:0006412
GO:GO:0003735 EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0000049
GO:GO:0019843 GO:GO:0015934 SUPFAM:SSF56808 eggNOG:COG0081
Gene3D:3.30.190.20 Gene3D:3.40.50.790 InterPro:IPR023673
HOGENOM:HOG000207015 OMA:AKGRYVK TIGRFAMs:TIGR01169 KO:K02863
ProtClustDB:PRK05424 HAMAP:MF_01318_B RefSeq:YP_181715.1
ProteinModelPortal:Q3Z7T4 STRING:Q3Z7T4 GeneID:3229744
KEGG:det:DET0992 PATRIC:21609033 BioCyc:DETH243164:GJNF-993-MONOMER
Uniprot:Q3Z7T4
Length = 237
Score = 523 (189.2 bits), Expect = 2.8e-50, P = 2.8e-50
Identities = 100/198 (50%), Positives = 140/198 (70%)
Query: 131 RMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAG 190
+M++ KF ET E H ++ +DPK QQLR LP G GK+V+V V AQGE A+ AG
Sbjct: 32 KMAAAKFDETVEMHLKMGLDPKNATQQLRGVAVLPHGLGKTVRVLVFAQGEAEKAAQAAG 91
Query: 191 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTT--NI 248
AD+ GGD+LI++++ GF++FD I++PDMM KV LGK+LG RGLMPNPK+GTV +
Sbjct: 92 ADVYGGDELIKKVEAGFLDFDVAISTPDMMSKVGKLGKVLGRRGLMPNPKSGTVVPAEDF 151
Query: 249 PQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYW 308
Q IEE +KG+VE++ D++GIVHI GKA F LL N + V +I +KP GAKG Y
Sbjct: 152 KQVIEEARKGRVEFKLDRSGIVHIILGKASFEGQALLENMTSVVDAIIRSKPTGAKGQYI 211
Query: 309 KSAYICSSMGPSIRLNIK 326
KSAY+ ++MGP ++++++
Sbjct: 212 KSAYLATTMGPGVKMDLR 229
>TIGR_CMR|CHY_2322 [details] [associations]
symbol:CHY_2322 "ribosomal protein L1" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR002143 InterPro:IPR005878
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006417
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006412 GO:GO:0003735
GO:GO:0000049 GO:GO:0019843 GO:GO:0015934 SUPFAM:SSF56808
eggNOG:COG0081 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 HOGENOM:HOG000207015 OMA:AKGRYVK
TIGRFAMs:TIGR01169 KO:K02863 ProtClustDB:PRK05424 HAMAP:MF_01318_B
RefSeq:YP_361131.1 ProteinModelPortal:Q3A9Q3 SMR:Q3A9Q3
STRING:Q3A9Q3 GeneID:3728765 KEGG:chy:CHY_2322 PATRIC:21277711
BioCyc:CHYD246194:GJCN-2321-MONOMER Uniprot:Q3A9Q3
Length = 231
Score = 520 (188.1 bits), Expect = 5.8e-50, P = 5.8e-50
Identities = 100/193 (51%), Positives = 133/193 (68%)
Query: 132 MSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGA 191
+S KF ET E +L +DP++ DQQ+R V LP GTGK+ KV V A+GEK EA+ AGA
Sbjct: 33 LSFAKFDETVEVAVKLGVDPRHADQQVRGAVVLPHGTGKTRKVLVFAKGEKAKEAEAAGA 92
Query: 192 DLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQA 251
D VG ++ IE+I G+++FD ++A+PDMM V LGKILGP+GLMP+PK GTVT + +A
Sbjct: 93 DYVGAEEYIEKIAQGWIDFDVVVATPDMMGAVGRLGKILGPKGLMPSPKTGTVTFEVAKA 152
Query: 252 IEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSA 311
I E K GK+EYR DK GIVH+P GK F + L+ NF + ++ KP GAKG Y K
Sbjct: 153 IAEIKAGKIEYRVDKAGIVHVPIGKVSFPVEKLVENFNTLMDALIKAKPAGAKGQYLKGV 212
Query: 312 YICSSMGPSIRLN 324
+ S+MGP I++N
Sbjct: 213 TVSSTMGPGIKIN 225
>TIGR_CMR|GSU_2866 [details] [associations]
symbol:GSU_2866 "ribosomal protein L1" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR002143
InterPro:IPR005878 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199
GO:GO:0006417 GO:GO:0006412 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0003735 GO:GO:0000049 GO:GO:0019843 GO:GO:0015934
SUPFAM:SSF56808 eggNOG:COG0081 Gene3D:3.30.190.20
Gene3D:3.40.50.790 InterPro:IPR023673 HOGENOM:HOG000207015
TIGRFAMs:TIGR01169 KO:K02863 OMA:YVTSTMG ProtClustDB:PRK05424
HAMAP:MF_01318_B RefSeq:NP_953908.1 ProteinModelPortal:Q748Y3
SMR:Q748Y3 GeneID:2686759 KEGG:gsu:GSU2866 PATRIC:22028583
BioCyc:GSUL243231:GH27-2847-MONOMER Uniprot:Q748Y3
Length = 234
Score = 520 (188.1 bits), Expect = 5.8e-50, P = 5.8e-50
Identities = 101/193 (52%), Positives = 131/193 (67%)
Query: 136 KFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGADLVG 195
KF ET E RL +DP++ DQ +R V LP G GK V+V V A+GEK EA+ AGAD VG
Sbjct: 37 KFDETVEVAVRLGVDPRHADQMVRGAVVLPNGLGKDVRVLVFAKGEKEKEAREAGADYVG 96
Query: 196 GDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEF 255
+DL+ +I+ G+ EFD IA+PDMM V +GK+LGPRGLMPNPK GTVT ++ +A++E
Sbjct: 97 AEDLVTKIQEGWFEFDTAIATPDMMGVVGKIGKLLGPRGLMPNPKVGTVTFDVGRAVKES 156
Query: 256 KKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICS 315
K GKVE+R +K GIVH P GK F D L N LA V+++ KP AKG Y K I S
Sbjct: 157 KAGKVEFRVEKAGIVHAPVGKVSFDADKLKENLLALVEALLKAKPSAAKGTYVKKISISS 216
Query: 316 SMGPSIRLNIKEM 328
+MGP + L+I ++
Sbjct: 217 TMGPGLNLDISDV 229
>UNIPROTKB|Q06797 [details] [associations]
symbol:rplA "50S ribosomal protein L1" species:224308
"Bacillus subtilis subsp. subtilis str. 168" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR002143 InterPro:IPR005878
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006417
GO:GO:0006412 GO:GO:0003735 EMBL:AL009126 GenomeReviews:AL009126_GR
GO:GO:0000049 GO:GO:0019843 GO:GO:0015934 SUPFAM:SSF56808
eggNOG:COG0081 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 HOGENOM:HOG000207015 TIGRFAMs:TIGR01169
KO:K02863 ProtClustDB:PRK05424 HAMAP:MF_01318_B EMBL:D13303
EMBL:D50303 PIR:E69694 RefSeq:NP_387984.2 ProteinModelPortal:Q06797
SMR:Q06797 EnsemblBacteria:EBBACT00000001732 GeneID:936843
KEGG:bsu:BSU01030 PATRIC:18971715 GenoList:BSU01030
BioCyc:BSUB:BSU01030-MONOMER Uniprot:Q06797
Length = 232
Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
Identities = 96/194 (49%), Positives = 133/194 (68%)
Query: 131 RMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAG 190
+ ++ KF T E FRL +DP+ NDQQ+R V LP GTGK+ +V V A+GEK EA+ AG
Sbjct: 32 KTNTAKFDATVEVAFRLGVDPRKNDQQIRGAVVLPNGTGKTQRVLVFAKGEKAKEAEAAG 91
Query: 191 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQ 250
AD VG D I +I+ G+ +FD ++A+PDMM +V +G++LGP+GLMPNPK GTVT + +
Sbjct: 92 ADFVGDTDYINKIQQGWFDFDVIVATPDMMGEVGKIGRVLGPKGLMPNPKTGTVTFEVEK 151
Query: 251 AIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKS 310
AI E K GKVEYR DK G +H+P GK F ++ L+ NF +I KP AKGVY K+
Sbjct: 152 AIGEIKAGKVEYRVDKAGNIHVPIGKVSFEDEKLVENFTTMYDTILKAKPAAAKGVYVKN 211
Query: 311 AYICSSMGPSIRLN 324
+ S+MGP ++++
Sbjct: 212 VAVTSTMGPGVKVD 225
>TIGR_CMR|BA_0098 [details] [associations]
symbol:BA_0098 "ribosomal protein L1" species:198094
"Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR002143 InterPro:IPR005878 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006417 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006412
GO:GO:0003735 GO:GO:0000049 GO:GO:0019843 GO:GO:0015934
SUPFAM:SSF56808 eggNOG:COG0081 Gene3D:3.30.190.20
Gene3D:3.40.50.790 InterPro:IPR023673 HOGENOM:HOG000207015
OMA:AKGRYVK TIGRFAMs:TIGR01169 KO:K02863 ProtClustDB:PRK05424
HAMAP:MF_01318_B RefSeq:NP_842666.1 RefSeq:YP_016701.1
RefSeq:YP_026384.1 ProteinModelPortal:Q81VU2 SMR:Q81VU2
DNASU:1087066 EnsemblBacteria:EBBACT00000011718
EnsemblBacteria:EBBACT00000017677 EnsemblBacteria:EBBACT00000020059
GeneID:1087066 GeneID:2814891 GeneID:2848851 KEGG:ban:BA_0098
KEGG:bar:GBAA_0098 KEGG:bat:BAS0098
BioCyc:BANT260799:GJAJ-109-MONOMER
BioCyc:BANT261594:GJ7F-111-MONOMER Uniprot:Q81VU2
Length = 230
Score = 518 (187.4 bits), Expect = 9.5e-50, P = 9.5e-50
Identities = 96/198 (48%), Positives = 134/198 (67%)
Query: 131 RMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAG 190
+ ++ KF T EA FRL +DPK DQQ+R V LP GTGK +V V A+GEK EA+ AG
Sbjct: 32 KTNTAKFDATVEAAFRLGVDPKKADQQIRGAVVLPHGTGKVQRVLVFAKGEKAKEAEAAG 91
Query: 191 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQ 250
AD VG D I +I+ G+ +FD ++A+PDMM +V LG++LGP+GLMPNPK GTVT ++ +
Sbjct: 92 ADFVGDADYIGKIQQGWFDFDVVVATPDMMGEVGKLGRVLGPKGLMPNPKTGTVTFDVTK 151
Query: 251 AIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKS 310
A+ E K GKVEYR DK G +H+P GK F + L+ NF +++ KP AKG Y K+
Sbjct: 152 AVNEIKAGKVEYRVDKAGNIHVPIGKVSFEDAKLVENFRTIADTLQKVKPAAAKGTYMKN 211
Query: 311 AYICSSMGPSIRLNIKEM 328
+ S+MGP +R+++ +
Sbjct: 212 VTVASTMGPGVRVDVSTL 229
>TIGR_CMR|SPO_3513 [details] [associations]
symbol:SPO_3513 "ribosomal protein L1" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042255 "ribosome assembly" evidence=ISS] InterPro:IPR002143
InterPro:IPR005878 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199
GO:GO:0006417 EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006412
GO:GO:0003735 GO:GO:0000049 GO:GO:0019843 GO:GO:0015934
SUPFAM:SSF56808 eggNOG:COG0081 Gene3D:3.30.190.20
Gene3D:3.40.50.790 InterPro:IPR023673 HOGENOM:HOG000207015
TIGRFAMs:TIGR01169 KO:K02863 OMA:YVTSTMG ProtClustDB:PRK05424
HAMAP:MF_01318_B RefSeq:YP_168708.1 ProteinModelPortal:Q5LMQ0
SMR:Q5LMQ0 GeneID:3194818 KEGG:sil:SPO3513 PATRIC:23380497
Uniprot:Q5LMQ0
Length = 232
Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
Identities = 95/193 (49%), Positives = 131/193 (67%)
Query: 133 SSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGAD 192
+S KF ET E L +DP++ DQ +R V LP GTGK+V+VAV A+G K EA+ AGAD
Sbjct: 34 ASAKFDETVEIAMNLGVDPRHADQMVRGVVGLPNGTGKTVRVAVFARGPKAEEAQAAGAD 93
Query: 193 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAI 252
+VG +DL+E I+ G +EFD+ IA+PDMM V LGKILGPR LMPNPK GTVT ++ QA+
Sbjct: 94 IVGAEDLMETIQSGKIEFDRCIATPDMMPVVGRLGKILGPRNLMPNPKVGTVTMDVAQAV 153
Query: 253 EEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAY 312
+ K G+V+++ +K G++H GK F E L+ N A V ++ KP GAKG Y K
Sbjct: 154 QNAKGGEVQFKVEKAGVIHAGVGKVSFDEAKLVENVRAFVDAVAKAKPAGAKGTYLKKIA 213
Query: 313 ICSSMGPSIRLNI 325
+ S+MGP + +++
Sbjct: 214 LSSTMGPGVSVDV 226
>TIGR_CMR|CBU_0227 [details] [associations]
symbol:CBU_0227 "ribosomal protein L1" species:227377
"Coxiella burnetii RSA 493" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] InterPro:IPR002143 InterPro:IPR005878
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006417
GO:GO:0006412 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0003735
GO:GO:0000049 GO:GO:0019843 GO:GO:0015934 SUPFAM:SSF56808
eggNOG:COG0081 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 HOGENOM:HOG000207015 TIGRFAMs:TIGR01169
KO:K02863 OMA:YVTSTMG ProtClustDB:PRK05424 HAMAP:MF_01318_B
RefSeq:NP_819271.1 ProteinModelPortal:Q83ET3 SMR:Q83ET3
GeneID:1208108 KEGG:cbu:CBU_0227 PATRIC:17929145
BioCyc:CBUR227377:GJ7S-233-MONOMER Uniprot:Q83ET3
Length = 232
Score = 488 (176.8 bits), Expect = 1.4e-46, P = 1.4e-46
Identities = 94/192 (48%), Positives = 129/192 (67%)
Query: 133 SSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGAD 192
+ KF E+ + L ID + +DQ +R LP G+G++VKVAV AQG+ +AK AGAD
Sbjct: 35 AKAKFNESIDVAINLGIDSRKSDQAIRGATVLPHGSGRTVKVAVFAQGDNVEKAKAAGAD 94
Query: 193 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAI 252
+VG DDL E+I+GG ++FD +IA+P+ M V LG++LGPRGLMPNPK GTVTT++ A+
Sbjct: 95 IVGLDDLAERIQGGDIDFDVVIATPETMRVVGKLGQVLGPRGLMPNPKVGTVTTDVASAV 154
Query: 253 EEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAY 312
+ K+G+V YR DK GI+H GK +F E L NFLA + I+ KP AKG Y K
Sbjct: 155 KNAKQGQVRYRTDKNGIIHCTIGKVNFEEKALEENFLALLNDIKKAKPSAAKGTYLKKLT 214
Query: 313 ICSSMGPSIRLN 324
+ S+MGP I ++
Sbjct: 215 LSSTMGPGIAID 226
>UNIPROTKB|P96932 [details] [associations]
symbol:rplA "50S ribosomal protein L1" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR002143 InterPro:IPR005878
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0005829
GO:GO:0005886 GO:GO:0005618 GO:GO:0006417 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0006412
EMBL:BX842574 GO:GO:0003735 GO:GO:0000049 GO:GO:0019843
GO:GO:0015934 SUPFAM:SSF56808 eggNOG:COG0081 Gene3D:3.30.190.20
Gene3D:3.40.50.790 InterPro:IPR023673 HOGENOM:HOG000207015
TIGRFAMs:TIGR01169 KO:K02863 OMA:YVTSTMG ProtClustDB:PRK05424
HAMAP:MF_01318_B PIR:F70613 RefSeq:NP_215155.1 RefSeq:NP_335081.1
RefSeq:YP_006513982.1 ProteinModelPortal:P96932 SMR:P96932
PRIDE:P96932 EnsemblBacteria:EBMYCT00000001871
EnsemblBacteria:EBMYCT00000072842 GeneID:13318527 GeneID:888043
GeneID:925953 KEGG:mtc:MT0669.1 KEGG:mtu:Rv0641 KEGG:mtv:RVBD_0641
PATRIC:18123195 TubercuList:Rv0641 Uniprot:P96932
Length = 235
Score = 481 (174.4 bits), Expect = 7.9e-46, P = 7.9e-46
Identities = 94/189 (49%), Positives = 125/189 (66%)
Query: 133 SSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGAD 192
SSTK T E RL +DP+ DQ +R TV+LP GTGK+ +VAV A GEK + A AGAD
Sbjct: 34 SSTKQDATVEVAIRLGVDPRKADQMVRGTVNLPHGTGKTARVAVFAVGEKADAAVAAGAD 93
Query: 193 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAI 252
+VG DDLIE+I+GG++EFD IA+PD M KV + ++LGPRGLMPNPK GTVT ++ +A+
Sbjct: 94 VVGSDDLIERIQGGWLEFDAAIATPDQMAKVGRIARVLGPRGLMPNPKTGTVTADVAKAV 153
Query: 253 EEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAY 312
+ K GK+ +R DK +H GKA F E L N+ AA+ + KP +KG Y K
Sbjct: 154 ADIKGGKINFRVDKQANLHFVIGKASFDEKLLAENYGAAIDEVLRLKPSSSKGRYLKKIT 213
Query: 313 ICSSMGPSI 321
+ ++ GP I
Sbjct: 214 VSTTTGPGI 222
>TIGR_CMR|SO_0221 [details] [associations]
symbol:SO_0221 "ribosomal protein L1" species:211586
"Shewanella oneidensis MR-1" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR002143 InterPro:IPR005878 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006417 GO:GO:0006412
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0003735 GO:GO:0000049
GO:GO:0019843 GO:GO:0015934 SUPFAM:SSF56808 eggNOG:COG0081
Gene3D:3.30.190.20 Gene3D:3.40.50.790 InterPro:IPR023673
HOGENOM:HOG000207015 OMA:AKGRYVK TIGRFAMs:TIGR01169 KO:K02863
ProtClustDB:PRK05424 HAMAP:MF_01318_B RefSeq:NP_715861.1
ProteinModelPortal:Q8EK77 SMR:Q8EK77 GeneID:1168104
KEGG:son:SO_0221 PATRIC:23520135 Uniprot:Q8EK77
Length = 233
Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 94/193 (48%), Positives = 124/193 (64%)
Query: 132 MSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGA 191
+++ KF E+ + L IDP+ +DQ +R LP GTG+ V+VAV QG AK AGA
Sbjct: 33 LATAKFVESVDVAVNLGIDPRKSDQNVRGATVLPHGTGRDVRVAVFTQGANAEAAKAAGA 92
Query: 192 DLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQA 251
+LVG DDL E+IK G M FD +IASPD M V LG+ILGPRGLMPNPK GTVT N+ +A
Sbjct: 93 ELVGMDDLAEKIKAGEMNFDVVIASPDAMRVVGMLGQILGPRGLMPNPKTGTVTPNVAEA 152
Query: 252 IEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSA 311
++ K G+V YR DK GI+H GK DF+ L N A + +++ KP AKGVY K
Sbjct: 153 VKNAKAGQVRYRNDKNGIIHTTIGKVDFTPVQLKENLEALISALKKAKPAVAKGVYVKKV 212
Query: 312 YICSSMGPSIRLN 324
I ++MG + ++
Sbjct: 213 SISTTMGAGVAVD 225
>UNIPROTKB|P0A7L0 [details] [associations]
symbol:rplA "50S ribosomal subunit protein L1"
species:83333 "Escherichia coli K-12" [GO:0015934 "large ribosomal
subunit" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0000049 "tRNA binding" evidence=IEA]
[GO:0045947 "negative regulation of translational initiation"
evidence=IDA] InterPro:IPR002143 InterPro:IPR005878
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0045947 GO:GO:0006412 EMBL:U00006 GO:GO:0003735 GO:GO:0000049
GO:GO:0019843 GO:GO:0015934 SUPFAM:SSF56808 PDB:2RDO PDBsum:2RDO
EMBL:V00339 eggNOG:COG0081 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 PDB:1ML5 PDBsum:1ML5 HOGENOM:HOG000207015
OMA:AKGRYVK TIGRFAMs:TIGR01169 PDB:3J0T PDB:3J0W PDB:3J0Y PDB:3J11
PDB:3J12 PDB:3J14 PDBsum:3J0T PDBsum:3J0W PDBsum:3J0Y PDBsum:3J11
PDBsum:3J12 PDBsum:3J14 PDB:1EG0 PDB:2GYA PDB:2GYC PDB:2WWQ
PDB:3E1B PDB:3E1D PDB:3FIK PDB:3IZT PDB:3IZU PDB:3J01 PDB:3KCR
PDB:487D PDBsum:1EG0 PDBsum:2GYA PDBsum:2GYC PDBsum:2WWQ
PDBsum:3E1B PDBsum:3E1D PDBsum:3FIK PDBsum:3IZT PDBsum:3IZU
PDBsum:3J01 PDBsum:3KCR PDBsum:487D KO:K02863 ProtClustDB:PRK05424
HAMAP:MF_01318_B PIR:S12573 RefSeq:NP_418411.1 RefSeq:YP_491477.1
ProteinModelPortal:P0A7L0 SMR:P0A7L0 DIP:DIP-35746N IntAct:P0A7L0
MINT:MINT-1268287 SWISS-2DPAGE:P0A7L0 PaxDb:P0A7L0 PRIDE:P0A7L0
EnsemblBacteria:EBESCT00000004739 EnsemblBacteria:EBESCT00000018368
GeneID:12930515 GeneID:948483 KEGG:ecj:Y75_p3213 KEGG:eco:b3984
PATRIC:32123489 EchoBASE:EB0857 EcoGene:EG10864
BioCyc:EcoCyc:EG10864-MONOMER BioCyc:ECOL316407:JW3947-MONOMER
EvolutionaryTrace:P0A7L0 Genevestigator:P0A7L0 Uniprot:P0A7L0
Length = 234
Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
Identities = 93/193 (48%), Positives = 124/193 (64%)
Query: 132 MSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGA 191
+++ KF E+ + L ID + +DQ +R LP GTG+SV+VAV QG AK AGA
Sbjct: 33 LATAKFVESVDVAVNLGIDARKSDQNVRGATVLPHGTGRSVRVAVFTQGANAEAAKAAGA 92
Query: 192 DLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQA 251
+LVG +DL +QIK G M FD +IASPD M V LG++LGPRGLMPNPK GTVT N+ +A
Sbjct: 93 ELVGMEDLADQIKKGEMNFDVVIASPDAMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEA 152
Query: 252 IEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSA 311
++ K G+V YR DK GI+H GK DF D L N A + +++ KP AKGVY K
Sbjct: 153 VKNAKAGQVRYRNDKNGIIHTTIGKVDFDADKLKENLEALLVALKKAKPTQAKGVYIKKV 212
Query: 312 YICSSMGPSIRLN 324
I ++MG + ++
Sbjct: 213 SISTTMGAGVAVD 225
>TIGR_CMR|CPS_4772 [details] [associations]
symbol:CPS_4772 "ribosomal protein L1" species:167879
"Colwellia psychrerythraea 34H" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR002143 InterPro:IPR005878 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006417 GO:GO:0006412
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0003735 GO:GO:0000049
GO:GO:0019843 GO:GO:0015934 SUPFAM:SSF56808 eggNOG:COG0081
Gene3D:3.30.190.20 Gene3D:3.40.50.790 InterPro:IPR023673
HOGENOM:HOG000207015 OMA:AKGRYVK TIGRFAMs:TIGR01169 KO:K02863
ProtClustDB:PRK05424 HAMAP:MF_01318_B RefSeq:YP_271416.1
ProteinModelPortal:Q47UV6 SMR:Q47UV6 STRING:Q47UV6 GeneID:3518789
KEGG:cps:CPS_4772 PATRIC:21472361
BioCyc:CPSY167879:GI48-4778-MONOMER Uniprot:Q47UV6
Length = 232
Score = 449 (163.1 bits), Expect = 1.9e-42, P = 1.9e-42
Identities = 88/192 (45%), Positives = 121/192 (63%)
Query: 133 SSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGAD 192
++ F E+ + L ID + +DQ +R LP GTG+ V+VAV QGE +AK AGAD
Sbjct: 34 ATANFRESVDVAVNLGIDARKSDQNVRGATVLPNGTGREVRVAVFTQGENAEKAKAAGAD 93
Query: 193 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAI 252
+VG +DL Q+K G M FD +IASPD M V LG+ILGPRGLMPNPK GTVT ++ A+
Sbjct: 94 IVGMEDLAAQVKAGEMNFDVVIASPDAMRVVGQLGQILGPRGLMPNPKVGTVTPDVAGAV 153
Query: 253 EEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAY 312
+ K G++ YR DK GI+H GKADF L N + +++++ KP AKG Y K
Sbjct: 154 KNAKSGQIRYRNDKNGIIHTTIGKADFEPAQLQENLESLLEALKKAKPANAKGQYLKKVS 213
Query: 313 ICSSMGPSIRLN 324
+ ++MG + +N
Sbjct: 214 LSTTMGAGVVVN 225
>UNIPROTKB|Q9KV33 [details] [associations]
symbol:rplA "50S ribosomal protein L1" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] InterPro:IPR002143 InterPro:IPR005878
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006417
GO:GO:0006412 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003735
GO:GO:0000049 GO:GO:0019843 GO:GO:0015934 SUPFAM:SSF56808
eggNOG:COG0081 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 OMA:AKGRYVK TIGRFAMs:TIGR01169 KO:K02863
ProtClustDB:PRK05424 HAMAP:MF_01318_B PIR:C82338 RefSeq:NP_229979.1
ProteinModelPortal:Q9KV33 SMR:Q9KV33 GeneID:2615091 KEGG:vch:VC0325
PATRIC:20079707 Uniprot:Q9KV33
Length = 233
Score = 444 (161.4 bits), Expect = 6.6e-42, P = 6.6e-42
Identities = 88/193 (45%), Positives = 120/193 (62%)
Query: 132 MSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGA 191
+++ KF E+ + L ID + +DQ +R LP GTG+ ++VAV QG AK AGA
Sbjct: 33 LATAKFVESVDVAVNLGIDARKSDQNVRGATVLPHGTGRDIRVAVFTQGANAEAAKAAGA 92
Query: 192 DLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQA 251
+LVG +DL + +K G M FD +IASPD M V LG ILGPRGLMPNPK GTVT N+ +A
Sbjct: 93 ELVGMEDLADLVKKGEMNFDVVIASPDAMRVVGQLGTILGPRGLMPNPKVGTVTPNVAEA 152
Query: 252 IEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSA 311
++ K G+V YR DK GI+H GK F D L N A + +++ KP AKGV+ K
Sbjct: 153 VKNAKAGQVRYRNDKNGIIHTTIGKVTFEADQLKENLEALLVALKKAKPSSAKGVFVKKV 212
Query: 312 YICSSMGPSIRLN 324
I ++MG + ++
Sbjct: 213 SISTTMGAGVAVD 225
>TIGR_CMR|VC_0325 [details] [associations]
symbol:VC_0325 "ribosomal protein L1" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR002143 InterPro:IPR005878 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006417 GO:GO:0006412
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003735 GO:GO:0000049
GO:GO:0019843 GO:GO:0015934 SUPFAM:SSF56808 eggNOG:COG0081
Gene3D:3.30.190.20 Gene3D:3.40.50.790 InterPro:IPR023673
OMA:AKGRYVK TIGRFAMs:TIGR01169 KO:K02863 ProtClustDB:PRK05424
HAMAP:MF_01318_B PIR:C82338 RefSeq:NP_229979.1
ProteinModelPortal:Q9KV33 SMR:Q9KV33 GeneID:2615091 KEGG:vch:VC0325
PATRIC:20079707 Uniprot:Q9KV33
Length = 233
Score = 444 (161.4 bits), Expect = 6.6e-42, P = 6.6e-42
Identities = 88/193 (45%), Positives = 120/193 (62%)
Query: 132 MSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGA 191
+++ KF E+ + L ID + +DQ +R LP GTG+ ++VAV QG AK AGA
Sbjct: 33 LATAKFVESVDVAVNLGIDARKSDQNVRGATVLPHGTGRDIRVAVFTQGANAEAAKAAGA 92
Query: 192 DLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQA 251
+LVG +DL + +K G M FD +IASPD M V LG ILGPRGLMPNPK GTVT N+ +A
Sbjct: 93 ELVGMEDLADLVKKGEMNFDVVIASPDAMRVVGQLGTILGPRGLMPNPKVGTVTPNVAEA 152
Query: 252 IEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSA 311
++ K G+V YR DK GI+H GK F D L N A + +++ KP AKGV+ K
Sbjct: 153 VKNAKAGQVRYRNDKNGIIHTTIGKVTFEADQLKENLEALLVALKKAKPSSAKGVFVKKV 212
Query: 312 YICSSMGPSIRLN 324
I ++MG + ++
Sbjct: 213 SISTTMGAGVAVD 225
>TIGR_CMR|APH_1027 [details] [associations]
symbol:APH_1027 "ribosomal protein L1" species:212042
"Anaplasma phagocytophilum HZ" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR002143 InterPro:IPR005878 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006417 GO:GO:0006412
GO:GO:0003735 EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0000049
GO:GO:0019843 GO:GO:0015934 SUPFAM:SSF56808 eggNOG:COG0081
Gene3D:3.30.190.20 Gene3D:3.40.50.790 InterPro:IPR023673
HOGENOM:HOG000207015 TIGRFAMs:TIGR01169 RefSeq:YP_505586.1
ProteinModelPortal:Q2GJ65 STRING:Q2GJ65 GeneID:3931039
KEGG:aph:APH_1027 PATRIC:20950804 KO:K02863 OMA:YVTSTMG
ProtClustDB:PRK05424 BioCyc:APHA212042:GHPM-1034-MONOMER
HAMAP:MF_01318_B Uniprot:Q2GJ65
Length = 216
Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 86/194 (44%), Positives = 129/194 (66%)
Query: 131 RMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAG 190
+ ++ +F E+ + +L+ + +R LPKG G+ V+VAVLA+GE +AK+AG
Sbjct: 19 KSTTARFKESVDVAIKLSTGDSRSGDSIRGVAVLPKGLGREVRVAVLAKGEYAKQAKDAG 78
Query: 191 ADLVGGDDLIEQIKGGF-MEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIP 249
AD+VG DLIE+IK G ++FD IA+PD M +V+++ KILGPRGLMPNPK GTVT +I
Sbjct: 79 ADVVGDSDLIEEIKKGRKLDFDWCIATPDFMSQVSAIAKILGPRGLMPNPKFGTVTFDIA 138
Query: 250 QAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWK 309
+ + K G+V +R+DK GIVH+ G FS +DL+ N A V +++ KP KG ++K
Sbjct: 139 KMVGIVKSGQVRFRSDKYGIVHVKIGDVGFSREDLMENLRAVVSAVQGLKPATVKGAFFK 198
Query: 310 SAYICSSMGPSIRL 323
+ ++ S+MG S R+
Sbjct: 199 AVFLNSTMGKSFRI 212
>TIGR_CMR|ECH_0955 [details] [associations]
symbol:ECH_0955 "ribosomal protein L1" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR002143 InterPro:IPR005878 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006417 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0006412 GO:GO:0003735 GO:GO:0000049
GO:GO:0019843 GO:GO:0015934 SUPFAM:SSF56808 eggNOG:COG0081
Gene3D:3.30.190.20 Gene3D:3.40.50.790 InterPro:IPR023673
HOGENOM:HOG000207015 TIGRFAMs:TIGR01169 KO:K02863 OMA:YVTSTMG
ProtClustDB:PRK05424 HAMAP:MF_01318_B RefSeq:YP_507743.1
ProteinModelPortal:Q2GFP0 STRING:Q2GFP0 GeneID:3927409
KEGG:ech:ECH_0955 PATRIC:20577292
BioCyc:ECHA205920:GJNR-958-MONOMER Uniprot:Q2GFP0
Length = 220
Score = 425 (154.7 bits), Expect = 6.8e-40, P = 6.8e-40
Identities = 82/193 (42%), Positives = 126/193 (65%)
Query: 133 SSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGAD 192
+ F E+ + LNI+ +D+Q+R V LPKG G+ +KVAV A+G A+ A AD
Sbjct: 23 AKANFCESVDVAINLNINSSKSDEQVRGCVVLPKGLGREIKVAVFAKGGYLEMAREAMAD 82
Query: 193 LVGGDDLIEQIKGGF--MEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQ 250
+VG ++LIE++K ++ D + +PD M V+S+ KILGP+GLMPNPK TVT + +
Sbjct: 83 IVGDEELIEEVKKKQCKLDVDWCLTTPDFMASVSSIAKILGPKGLMPNPKFNTVTFELAK 142
Query: 251 AIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKS 310
AI+ K G++++++DKTGIVH G FS +DLL NF A + +++ KP KG+Y+K
Sbjct: 143 AIKMIKSGQIKFKSDKTGIVHAKIGNIKFSIEDLLENFNAVISAVKQCKPASIKGLYFKD 202
Query: 311 AYICSSMGPSIRL 323
+I S+MG S+++
Sbjct: 203 VFIISTMGKSVKV 215
>TAIR|locus:2041519 [details] [associations]
symbol:AT2G42710 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0015934 "large
ribosomal subunit" evidence=IEA;ISS] [GO:0006354 "DNA-dependent
transcription, elongation" evidence=RCA] InterPro:IPR002143
InterPro:IPR005878 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0006412 GO:GO:0003723 GO:GO:0003735
GO:GO:0015934 SUPFAM:SSF56808 eggNOG:COG0081 Gene3D:3.30.190.20
Gene3D:3.40.50.790 HOGENOM:HOG000207015 TIGRFAMs:TIGR01169
HSSP:P27150 EMBL:AY091124 EMBL:AY113995 EMBL:AK118309
IPI:IPI00522914 RefSeq:NP_850375.1 UniGene:At.36979
ProteinModelPortal:Q8RWT4 SMR:Q8RWT4 STRING:Q8RWT4 PaxDb:Q8RWT4
PRIDE:Q8RWT4 EnsemblPlants:AT2G42710.1 GeneID:818871
KEGG:ath:AT2G42710 TAIR:At2g42710 InParanoid:Q8RWT4 OMA:KYAGYVN
PhylomeDB:Q8RWT4 ProtClustDB:CLSN2680207 Genevestigator:Q8RWT4
Uniprot:Q8RWT4
Length = 415
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 83/202 (41%), Positives = 126/202 (62%)
Query: 133 SSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGAD 192
+ KF ET EAH RL I+ ++ +R T++LP K VKVA A+G +AK AGAD
Sbjct: 201 AKAKFDETLEAHVRLGIEKGRSELIVRGTLALPHSVKKDVKVAFFAEGADAEDAKAAGAD 260
Query: 193 LVGGDDLIEQI-KGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQA 251
+VGG +LIE+I K G ++FD+ +A+P MM +V + +IL GLMPNPK G+VT ++ +A
Sbjct: 261 VVGGLELIEEILKSGKIDFDRCLATPKMMPRVYKISRILNNHGLMPNPKQGSVTKDVTKA 320
Query: 252 IEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGV----- 306
+++ K G ++R DKT I+H+P GK FSE+ L N A + ++ KP G K
Sbjct: 321 VKDAKAGHTKFRMDKTSILHVPLGKMSFSEEALRENVGAFMNALLLAKPAGLKKTSKYAG 380
Query: 307 YWKSAYICSSMGPSIRLNIKEM 328
Y + ++CS+MG ++I+ +
Sbjct: 381 YVNAFHLCSTMGKGYPVSIQSL 402
>ASPGD|ASPL0000012808 [details] [associations]
symbol:AN8225 species:162425 "Emericella nidulans"
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005762 "mitochondrial
large ribosomal subunit" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR002143 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 GO:GO:0006412 GO:GO:0003723
EMBL:BN001302 GO:GO:0003735 EMBL:AACD01000144 GO:GO:0015934
SUPFAM:SSF56808 eggNOG:COG0081 Gene3D:3.30.190.20
Gene3D:3.40.50.790 OMA:YLRAFEV OrthoDB:EOG49631S RefSeq:XP_681494.1
ProteinModelPortal:Q5AU05 STRING:Q5AU05
EnsemblFungi:CADANIAT00004275 GeneID:2868991 KEGG:ani:AN8225.2
HOGENOM:HOG000159984 Uniprot:Q5AU05
Length = 310
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 62/191 (32%), Positives = 97/191 (50%)
Query: 142 EAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQ-GEKF-NEAKNAGADLVGGDDL 199
E H RL + + +R + P ++ V+ G K +A AGA LVG D++
Sbjct: 109 EVHIRLKT--RRDGPVIRNMIRFPHSVQTESRICVICPPGSKHAKDALAAGAVLVGEDEV 166
Query: 200 IEQIKGGFMEFDKLIASPDMMVKVAS--LGKILGPRGLMPNPKAGTVTTNIPQAIEEFKK 257
E +K G +EFD+ +A PD M +A LG+ILGPRGLMP+ K GTV ++ +E +
Sbjct: 167 FEVVKSGRIEFDRCLAHPDSMPALAKAGLGRILGPRGLMPSAKTGTVVEDVAARVEMLRG 226
Query: 258 GKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEAN----KPKGAKGVYWKSAYI 313
G V YR ++ +V +P G+ FS + L N + ++ + + K +Y +
Sbjct: 227 GTV-YR-ERDAVVRLPIGQLGFSPEQLRDNLRVTIDQVKKDAASLNDRITKEIY--EVVL 282
Query: 314 CSSMGPSIRLN 324
S+ GP LN
Sbjct: 283 SSTHGPGFSLN 293
>TIGR_CMR|NSE_0681 [details] [associations]
symbol:NSE_0681 "ribosomal protein L1" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0042255 "ribosome
assembly" evidence=ISS] InterPro:IPR002143 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006417 GO:GO:0006412
GO:GO:0003735 GO:GO:0000049 GO:GO:0019843 EMBL:CP000237
GenomeReviews:CP000237_GR GO:GO:0015934 SUPFAM:SSF56808
eggNOG:COG0081 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 HOGENOM:HOG000207015 KO:K02863
ProtClustDB:PRK05424 HAMAP:MF_01318_B RefSeq:YP_506559.1
ProteinModelPortal:Q2GD87 STRING:Q2GD87 GeneID:3932130
KEGG:nse:NSE_0681 PATRIC:22681381 OMA:CESVFAT
BioCyc:NSEN222891:GHFU-695-MONOMER Uniprot:Q2GD87
Length = 209
Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
Identities = 49/128 (38%), Positives = 73/128 (57%)
Query: 195 GGDDLIEQIKG--GFMEFDKL-IASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQA 251
GG++LIE+IK F++ K +ASP MM K++ + +ILGPRGLMP+ K G VT +I A
Sbjct: 72 GGEELIERIKAKKNFVKGYKYSLASPPMMSKLSKIARILGPRGLMPDSKYGLVTHDIAAA 131
Query: 252 IEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAK-GVYWKS 310
+ GK ++ +K G++H G D L NF +S+ A +PK Y +S
Sbjct: 132 VTAILGGKALFKTNKAGVMHSKIGNLGMGFDKLRENFQIFCESVFATRPKNVSLQSYVRS 191
Query: 311 AYICSSMG 318
+ S+MG
Sbjct: 192 ISVSSTMG 199
>POMBASE|SPAC1610.02c [details] [associations]
symbol:SPAC1610.02c "mitochondrial ribosomal protein
subunit L1 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005762
"mitochondrial large ribosomal subunit" evidence=ISS] [GO:0006412
"translation" evidence=ISS] [GO:0032543 "mitochondrial translation"
evidence=NAS] InterPro:IPR002143 InterPro:IPR005879
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 PomBase:SPAC1610.02c EMBL:CU329670
GO:GO:0005730 GenomeReviews:CU329670_GR GO:GO:0003723 GO:GO:0005762
GO:GO:0003735 GO:GO:0032543 SUPFAM:SSF56808 eggNOG:COG0081
Gene3D:3.30.190.20 Gene3D:3.40.50.790 TIGRFAMs:TIGR01170
RefSeq:NP_001018241.2 ProteinModelPortal:Q9P6M9 STRING:Q9P6M9
EnsemblFungi:SPAC1610.02c.1 GeneID:3361520 KEGG:spo:SPAC1610.02c
OMA:YLRAFEV OrthoDB:EOG49631S NextBio:20811562 Uniprot:Q9P6M9
Length = 253
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 56/186 (30%), Positives = 93/186 (50%)
Query: 145 FRLNIDPKYNDQ--QLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGADLVGGDDLIEQ 202
+ L+I K N + R ++ P + K+ V A+G +EA GA VG +DL+++
Sbjct: 69 YMLSIALKSNRRAPSARGQIAFPHPFQEPPKICVFAKGAAADEALKLGATYVGAEDLVKK 128
Query: 203 IKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEY 262
I+ +EF K A P+ + + K+LG + LMP+ K GT++ + IE V+Y
Sbjct: 129 IQTEPLEFSKCFAHPNSAELLPQVAKLLGSKRLMPSIKRGTISDELKPLIESALTA-VDY 187
Query: 263 RADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPK--GAKGVYWKSAYICSSMGPS 320
R + G +++P GK FS+ +L N A V ++ K G V K ++ +S +
Sbjct: 188 RQNDAGSINLPVGKLGFSDKELQENIEALVSNVRFTLAKLPGKVKVTVKHVHLSASHAIA 247
Query: 321 IRLNIK 326
I L K
Sbjct: 248 IPLQYK 253
>SGD|S000002523 [details] [associations]
symbol:MRPL1 "Mitochondrial ribosomal protein of the large
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0015934 "large
ribosomal subunit" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;IPI] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005762 "mitochondrial large ribosomal subunit"
evidence=IPI] [GO:0006412 "translation" evidence=IEA] [GO:0032543
"mitochondrial translation" evidence=IC] InterPro:IPR002143
InterPro:IPR005879 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155 SGD:S000002523
Prosite:PS01199 EMBL:BK006938 GO:GO:0003723 GO:GO:0005762
GO:GO:0003735 GO:GO:0032543 EMBL:Z48758 SUPFAM:SSF56808
eggNOG:COG0081 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 TIGRFAMs:TIGR01170 OMA:YLRAFEV OrthoDB:EOG49631S
EMBL:AY557683 PIR:S52681 RefSeq:NP_010401.1
ProteinModelPortal:Q04599 SMR:Q04599 DIP:DIP-5223N IntAct:Q04599
MINT:MINT-569104 STRING:Q04599 PaxDb:Q04599 PeptideAtlas:Q04599
EnsemblFungi:YDR116C GeneID:851694 KEGG:sce:YDR116C CYGD:YDR116c
HOGENOM:HOG000248778 NextBio:969353 Genevestigator:Q04599
GermOnline:YDR116C Uniprot:Q04599
Length = 285
Score = 192 (72.6 bits), Expect = 4.3e-14, P = 4.3e-14
Identities = 54/172 (31%), Positives = 94/172 (54%)
Query: 158 LRATVSLPKGTGKSVKVAVLAQGE-KFNEAKNAGAD-LVGGDDLIEQIKGG--FMEFDKL 213
L +V+ PK + +K+A E K E + + L+GG DL+ +IK G ++FDK
Sbjct: 113 LSGSVTFPKPL-RYIKIAAFTNDESKLEELREKYPNHLIGGADLVAKIKSGEISVDFDKA 171
Query: 214 IASPDMMVKVAS-LGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHI 272
A+PD++ + S + +ILGPRG++P+ K GTV+ +I ++E G + +R + + I
Sbjct: 172 FATPDIVPALQSQVARILGPRGVLPSVKKGTVSDDISSLLQE-SLGSMPFR-QRGNSISI 229
Query: 273 PFGKADFSEDDLLINFL---AAVKSIEANKPKGAKGVYWKSAYICSSMGPSI 321
GK F++ ++L N + AA K+ N+ + K+ + S+ GP I
Sbjct: 230 GVGKCYFTDREILQNIISARAAFKTAVDNQKSKKPNILSKTT-LSSTHGPGI 280
>GENEDB_PFALCIPARUM|PFL0500w [details] [associations]
symbol:PFL0500w "50S ribosomal protein L1,
putative" species:5833 "Plasmodium falciparum" [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISS] [GO:0020011
"apicoplast" evidence=ISS] InterPro:IPR002143 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687 GO:GO:0006412
GO:GO:0003723 GO:GO:0003735 EMBL:AE014188 SUPFAM:SSF56808
GO:GO:0020011 GO:GO:0022625 Gene3D:3.30.190.20 Gene3D:3.40.50.790
RefSeq:XP_001350509.1 ProteinModelPortal:Q8I5U9
EnsemblProtists:PFL0500w:mRNA GeneID:811153 KEGG:pfa:PFL0500w
EuPathDB:PlasmoDB:PF3D7_1210000 HOGENOM:HOG000281192
ProtClustDB:CLSZ2433515 Uniprot:Q8I5U9
Length = 339
Score = 169 (64.5 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 54/197 (27%), Positives = 97/197 (49%)
Query: 136 KFTETAEAHFRLNIDPKYN----DQQLRATVSLPKGTGKS--VKVAVLAQGEKFNEAKNA 189
KF E+ + + L+ +PK + + ++ ++ P K KV V+ + A +
Sbjct: 135 KFVESIDIY--LSFNPKKSKMTKNDNIKTFITFPHNLKKKREKKVYVVTNAKLQKIASQS 192
Query: 190 GADLVGGDDLIEQIKGGFMEFDK-----LIASPDMMVKVASLGKILGPRGLMPNPKAGTV 244
GAD+VG DDLI +IK + K LI + D + K+ +GK +G +GLMPN K GT+
Sbjct: 193 GADVVGEDDLINKIKEREIRLQKRNNNFLICTNDCIHKLTRVGKEIGRKGLMPNEKCGTL 252
Query: 245 TTN--IPQAIEEFKKGKVE-YRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPK 301
+ +P+ ++ FK ++ +K ++I G S D++ N + +E +
Sbjct: 253 VSEFLLPKHVKLFKSENTYIFKLNKLNTLNINIGDVYMSNDEIRENINHLFEHLENLEFF 312
Query: 302 GAKGVYWKSAYICSSMG 318
+ K+ Y+ S+MG
Sbjct: 313 HFNFKHVKTIYLSSTMG 329
>UNIPROTKB|Q8I5U9 [details] [associations]
symbol:PFL0500w "Mitochondrial ribosomal protein L12,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0020011
"apicoplast" evidence=ISS] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISS] InterPro:IPR002143 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687 GO:GO:0006412
GO:GO:0003723 GO:GO:0003735 EMBL:AE014188 SUPFAM:SSF56808
GO:GO:0020011 GO:GO:0022625 Gene3D:3.30.190.20 Gene3D:3.40.50.790
RefSeq:XP_001350509.1 ProteinModelPortal:Q8I5U9
EnsemblProtists:PFL0500w:mRNA GeneID:811153 KEGG:pfa:PFL0500w
EuPathDB:PlasmoDB:PF3D7_1210000 HOGENOM:HOG000281192
ProtClustDB:CLSZ2433515 Uniprot:Q8I5U9
Length = 339
Score = 169 (64.5 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 54/197 (27%), Positives = 97/197 (49%)
Query: 136 KFTETAEAHFRLNIDPKYN----DQQLRATVSLPKGTGKS--VKVAVLAQGEKFNEAKNA 189
KF E+ + + L+ +PK + + ++ ++ P K KV V+ + A +
Sbjct: 135 KFVESIDIY--LSFNPKKSKMTKNDNIKTFITFPHNLKKKREKKVYVVTNAKLQKIASQS 192
Query: 190 GADLVGGDDLIEQIKGGFMEFDK-----LIASPDMMVKVASLGKILGPRGLMPNPKAGTV 244
GAD+VG DDLI +IK + K LI + D + K+ +GK +G +GLMPN K GT+
Sbjct: 193 GADVVGEDDLINKIKEREIRLQKRNNNFLICTNDCIHKLTRVGKEIGRKGLMPNEKCGTL 252
Query: 245 TTN--IPQAIEEFKKGKVE-YRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPK 301
+ +P+ ++ FK ++ +K ++I G S D++ N + +E +
Sbjct: 253 VSEFLLPKHVKLFKSENTYIFKLNKLNTLNINIGDVYMSNDEIRENINHLFEHLENLEFF 312
Query: 302 GAKGVYWKSAYICSSMG 318
+ K+ Y+ S+MG
Sbjct: 313 HFNFKHVKTIYLSSTMG 329
>ZFIN|ZDB-GENE-060526-311 [details] [associations]
symbol:mrpl1 "mitochondrial ribosomal protein L1"
species:7955 "Danio rerio" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0015934 "large ribosomal subunit"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 ZFIN:ZDB-GENE-060526-311 GO:GO:0003723
GO:GO:0003735 GO:GO:0015934 SUPFAM:SSF56808 EMBL:BX640512
Gene3D:3.30.190.20 Gene3D:3.40.50.790 GeneTree:ENSGT00390000003587
InterPro:IPR024663 Pfam:PF13003 IPI:IPI00997672
Ensembl:ENSDART00000076835 ArrayExpress:F1QMG1 Uniprot:F1QMG1
Length = 324
Score = 161 (61.7 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 57/192 (29%), Positives = 89/192 (46%)
Query: 144 HFRLN--IDPKYNDQQLRATVSLPKGTGKSV-KVAVLAQGEKFNEAKNA---GADLVGGD 197
+ RLN ++ K T+ LP + KV V EK ++A+ A GA + GG
Sbjct: 133 NLRLNMKLEKKRKLDPFVRTIHLPHPFKSDINKVVVFT--EKPDQARIALENGAAVAGGV 190
Query: 198 DLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKK 257
+L E+I + D +A PD++ K+ L L R P K GTV NIP+ +E FK
Sbjct: 191 ELFEKILADEITADFYLAEPDILPKLVPLKNKL--RKKFPKSKRGTVGINIPRMLELFKT 248
Query: 258 GKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSM 317
G EY + V+ D ++ +L N +K + ++KP G A +CS
Sbjct: 249 GH-EYIVEDI-YVNTEVATLDMPKEHILENIHTILKDVASHKP-AEFGPIIDRAIVCSRS 305
Query: 318 GPSIRLNIKEML 329
+ L ++E+L
Sbjct: 306 SEGLHLKLEELL 317
>POMBASE|SPCC1183.08c [details] [associations]
symbol:rpl101 "60S ribosomal protein L10a" species:4896
"Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic translation"
evidence=NAS] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006412 "translation" evidence=ISO]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=ISO]
InterPro:IPR002143 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155
PomBase:SPCC1183.08c Prosite:PS01199 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0003723 GO:GO:0003735 GO:GO:0002181
SUPFAM:SSF56808 KO:K02865 GO:GO:0022625 eggNOG:COG0081
HOGENOM:HOG000207014 OMA:VAVGHMK Gene3D:3.30.190.20
Gene3D:3.40.50.790 InterPro:IPR023673 OrthoDB:EOG40ZV6T PIR:T40848
RefSeq:NP_587891.1 ProteinModelPortal:O74836 SMR:O74836
STRING:O74836 EnsemblFungi:SPCC1183.08c.1 GeneID:2539222
KEGG:spo:SPCC1183.08c NextBio:20800392 Uniprot:O74836
Length = 216
Score = 150 (57.9 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 53/199 (26%), Positives = 95/199 (47%)
Query: 137 FTETAEAHFRL-NIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGADLVG 195
FTET E L N DP+ D++ T+ LP ++ + +L + AK+ G D +
Sbjct: 27 FTETVELQIGLKNYDPQ-RDKRFSGTIKLPNVPRPNMAICILGDAHDLDRAKHGGVDAMS 85
Query: 196 GDDLIEQIKGGFM------EFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIP 249
DDL + K + ++D IAS ++++K + ++LGP GL KAG + +
Sbjct: 86 VDDLKKLNKNKKLVKKLAKKYDAFIAS-EVLIK--QIPRLLGP-GLS---KAGKFPSPVS 138
Query: 250 QAIEEFKK-----GKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAK 304
A + + K ++++ K + + G + SE+ L+ N + AV + + KG +
Sbjct: 139 HADDLYGKITEVKSTIKFQLKKVLCLGVAVGHVEMSEEQLIANIMLAVNFLVSLLKKGWQ 198
Query: 305 GVYWKSAYICSSMGPSIRL 323
+ S + S+MG RL
Sbjct: 199 NI--GSLVVKSTMGKPHRL 215
>POMBASE|SPBC30D10.18c [details] [associations]
symbol:rpl102 "60S ribosomal protein L10a"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006412 "translation"
evidence=ISO] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=ISO] InterPro:IPR002143 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 PomBase:SPBC30D10.18c Prosite:PS01199
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723 GO:GO:0003735
GO:GO:0002181 SUPFAM:SSF56808 KO:K02865 GO:GO:0022625
HOGENOM:HOG000207014 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 OMA:MSICILG PIR:T40178 RefSeq:NP_596267.1
ProteinModelPortal:O14363 SMR:O14363 STRING:O14363 PRIDE:O14363
EnsemblFungi:SPBC30D10.18c.1 GeneID:2540378 KEGG:spo:SPBC30D10.18c
OrthoDB:EOG40ZV6T NextBio:20801506 Uniprot:O14363
Length = 216
Score = 145 (56.1 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 52/198 (26%), Positives = 93/198 (46%)
Query: 137 FTETAEAHFRL-NIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGADLVG 195
FTET E L N DP+ D++ T+ LP ++ + +L + AK+ G D +
Sbjct: 27 FTETVELQIGLKNYDPQ-RDKRFSGTIKLPNVPRPNMSICILGDAHDLDRAKHGGVDAMS 85
Query: 196 GDDLIEQIKGGFM------EFDKLIASPDMMVKVASLGKILGP----RGLMPNPKAGTVT 245
DDL + K + ++D IAS ++++K + ++LGP G P+P + +
Sbjct: 86 VDDLKKLNKNKKLVKKLAKKYDAFIAS-EVLIK--QIPRLLGPGLSKAGKFPSPVSHS-- 140
Query: 246 TNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKG 305
++ I E K ++++ K + + G D +E+ L N A+ + + KG +
Sbjct: 141 DDLYGKIIEVKS-TIKFQLKKVLCLGVAVGHVDMAEEQLAANLSLAINFLVSLLKKGWQN 199
Query: 306 VYWKSAYICSSMGPSIRL 323
+ S I S+MG RL
Sbjct: 200 I--GSLVIKSTMGKPYRL 215
>FB|FBgn0037566 [details] [associations]
symbol:mRpL1 "mitochondrial ribosomal protein L1"
species:7227 "Drosophila melanogaster" [GO:0006412 "translation"
evidence=ISS] [GO:0005762 "mitochondrial large ribosomal subunit"
evidence=ISS] [GO:0003735 "structural constituent of ribosome"
evidence=ISS] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR002143 InterPro:IPR005879 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687 EMBL:AE014297
GO:GO:0006412 GO:GO:0003723 GO:GO:0005762 GO:GO:0003735
SUPFAM:SSF56808 eggNOG:COG0081 Gene3D:3.30.190.20
Gene3D:3.40.50.790 CTD:65008 GeneTree:ENSGT00390000003587
OMA:HRETHHP TIGRFAMs:TIGR01170 EMBL:AY051800 RefSeq:NP_524275.1
UniGene:Dm.2468 SMR:Q9VHT5 STRING:Q9VHT5 EnsemblMetazoa:FBtr0081832
GeneID:40980 KEGG:dme:Dmel_CG7494 UCSC:CG7494-RA
FlyBase:FBgn0037566 InParanoid:Q9VHT5 OrthoDB:EOG4RN8RF
GenomeRNAi:40980 NextBio:821575 Uniprot:Q9VHT5
Length = 354
Score = 147 (56.8 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 42/143 (29%), Positives = 73/143 (51%)
Query: 169 GKSVKVAVLAQGE-KFNEAKNAGADLVGGDDLIEQIKGGFM---EFDKLIASPDMMVKVA 224
G+ K+ V +G + EA+ AGA LVGG +LI+ I G + ++ +IA P+++ ++
Sbjct: 155 GEERKIIVFTKGNNEVLEAREAGASLVGGVELIKDITSGELLLSDYQYVIAHPNILAELV 214
Query: 225 SLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKT------GIVHIPFGKAD 278
+L ++ + PNPK+ T+ TN+ + I +F G + Y A K G++ G D
Sbjct: 215 ALRGLMKRK--FPNPKSETLGTNLAEMIVKFSSG-ISYSAAKDEYQQNFGLITASVGTLD 271
Query: 279 FSEDDLLINFLAAVKSIEANKPK 301
L N ++ I +PK
Sbjct: 272 MDVQKLEENIKFLLQDINTMRPK 294
>UNIPROTKB|E1C7D6 [details] [associations]
symbol:MRPL1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0015934
"large ribosomal subunit" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 GO:GO:0005739 GO:GO:0003723 GO:GO:0003735
GO:GO:0015934 SUPFAM:SSF56808 Gene3D:3.30.190.20 Gene3D:3.40.50.790
CTD:65008 GeneTree:ENSGT00390000003587 InterPro:IPR024663
Pfam:PF13003 EMBL:AADN02016133 IPI:IPI00598672 RefSeq:XP_420471.2
Ensembl:ENSGALT00000016805 GeneID:422507 KEGG:gga:422507
OMA:IQADFYV NextBio:20825131 Uniprot:E1C7D6
Length = 332
Score = 145 (56.1 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 48/185 (25%), Positives = 89/185 (48%)
Query: 147 LNIDPKYNDQQLRATVSLP-KGTGKSVKVAVLAQGEKFNE-AKNAGADLVGGDDLIEQIK 204
+ + K Q + V LP + T ++ KV V + E+ E A+ GA +VGG +LI+ I
Sbjct: 123 MELPKKKKVDQFASIVLLPYRFTDETNKVLVFTENEQEAEIARENGAAVVGGVELIKWIL 182
Query: 205 GGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRA 264
++ D IA P ++ K+ L L + P+ + ++ +IP+ ++ F++G +EY
Sbjct: 183 EDEIQMDFYIAVPAIIPKLIPLRNKLKRK--YPSTRRNSLGHDIPKMLQFFREG-LEYTV 239
Query: 265 DKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 324
++ + D + ++ N ++ I KP A G + K I SS + LN
Sbjct: 240 QDERLIKTRIARLDMPTEQIVANLKTIIEDICKFKPSSA-GPFVKKLVIRSSTSEGLLLN 298
Query: 325 IKEML 329
+ +L
Sbjct: 299 LDGLL 303
>UNIPROTKB|G4MTC2 [details] [associations]
symbol:MGG_04696 "Ribosomal protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0043581 "mycelium development"
evidence=IEP] InterPro:IPR002143 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006412 GO:GO:0003723
GO:GO:0003735 GO:GO:0043581 EMBL:CM001232 GO:GO:0015934
SUPFAM:SSF56808 KO:K02865 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 RefSeq:XP_003713675.1 ProteinModelPortal:G4MTC2
SMR:G4MTC2 EnsemblFungi:MGG_04696T0 GeneID:2678194
KEGG:mgr:MGG_04696 Uniprot:G4MTC2
Length = 217
Score = 134 (52.2 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 53/200 (26%), Positives = 93/200 (46%)
Query: 137 FTETAEAHFRL-NIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGADLVG 195
F ET E L N DP+ D++ T+ LP ++ + +L + AK+ G D +
Sbjct: 28 FLETVELQIGLKNYDPQ-RDKRFSGTIKLPVVPRPNMAICILGDQHDLDRAKHGGIDSMS 86
Query: 196 GDDLIEQ------IKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIP 249
DDL + IK ++D IAS D ++K + ++LGP GL KAG T +
Sbjct: 87 ADDLKKLNKNKKLIKKLARKYDAFIAS-DTLIK--QIPRLLGP-GLS---KAGKFPTPVS 139
Query: 250 QA------IEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGA 303
A + E K ++++ K + + G + +++ L+ N + A+ + + KG
Sbjct: 140 HADDLSGKVTEVKS-TIKFQLKKVLCMGVAVGNVEMTQEQLVGNIMLAINYLVSLLKKGW 198
Query: 304 KGVYWKSAYICSSMGPSIRL 323
+ V S I ++M P R+
Sbjct: 199 QNV--GSLTIKATMSPPKRI 216
>UNIPROTKB|Q9BYD6 [details] [associations]
symbol:MRPL1 "39S ribosomal protein L1, mitochondrial"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0015934 "large
ribosomal subunit" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR005879 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 GO:GO:0005739 GO:GO:0006412
GO:GO:0003723 GO:GO:0003735 EMBL:CH471057 GO:GO:0015934
SUPFAM:SSF56808 Gene3D:3.30.190.20 Gene3D:3.40.50.790 CTD:65008
eggNOG:NOG271882 HOVERGEN:HBG061212 OMA:HRETHHP OrthoDB:EOG4K6G54
InterPro:IPR024663 Pfam:PF13003 TIGRFAMs:TIGR01170 EMBL:AF212225
EMBL:AC112225 EMBL:AC114801 EMBL:BC014356 EMBL:BC015109
EMBL:BC032595 EMBL:AB049474 EMBL:CR457191 EMBL:AK024791
IPI:IPI00549381 RefSeq:NP_064621.3 UniGene:Hs.532019
ProteinModelPortal:Q9BYD6 SMR:Q9BYD6 IntAct:Q9BYD6 STRING:Q9BYD6
PhosphoSite:Q9BYD6 DMDM:239938694 PaxDb:Q9BYD6 PRIDE:Q9BYD6
DNASU:65008 Ensembl:ENST00000315567 GeneID:65008 KEGG:hsa:65008
UCSC:uc003hku.2 GeneCards:GC04P078694 HGNC:HGNC:14275 HPA:HPA043656
MIM:611821 neXtProt:NX_Q9BYD6 PharmGKB:PA30938 InParanoid:Q9BYD6
GenomeRNAi:65008 NextBio:67192 ArrayExpress:Q9BYD6 Bgee:Q9BYD6
CleanEx:HS_MRPL1 Genevestigator:Q9BYD6 GermOnline:ENSG00000169288
Uniprot:Q9BYD6
Length = 325
Score = 137 (53.3 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 44/181 (24%), Positives = 81/181 (44%)
Query: 152 KYNDQQLRATVSLPKGTGKSV-KVAVLAQG-EKFNEAKNAGADLVGGDDLIEQIKGGFME 209
K N + + +SLP + KVAV + + A+ GA GG LI++I +
Sbjct: 134 KKNVEPFTSVLSLPYPFASEINKVAVFTENASEVKIAEENGAAFAGGTSLIQKIWDDEIV 193
Query: 210 FDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKG-KVEYRADKTG 268
D +A P++M ++ L K L + P ++ +IP+ +E FK G +++ ++
Sbjct: 194 ADFYVAVPEIMPELNRLRKKLNKK--YPKLSRNSIGRDIPKMLELFKNGHEIKVDEEREN 251
Query: 269 IVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEM 328
+ D S D + N A + + ++P G + A++ SS + L I +
Sbjct: 252 FLQTKIATLDMSSDQIAANLQAVINEVCRHRPLNL-GPFVVRAFLRSSTSEGLLLKIDPL 310
Query: 329 L 329
L
Sbjct: 311 L 311
>ASPGD|ASPL0000057044 [details] [associations]
symbol:AN1122 species:162425 "Emericella nidulans"
[GO:0015934 "large ribosomal subunit" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] InterPro:IPR002143
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199 EMBL:BN001308
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 GO:GO:0015934
SUPFAM:SSF56808 HOGENOM:HOG000207014 Gene3D:3.30.190.20
Gene3D:3.40.50.790 InterPro:IPR023673 OMA:MSICILG
EnsemblFungi:CADANIAT00001506 Uniprot:C8VTC4
Length = 217
Score = 131 (51.2 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 52/196 (26%), Positives = 91/196 (46%)
Query: 137 FTETAEAHFRL-NIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGADLVG 195
F ET E L N DP+ D++ T+ LP + + VL + AK+ G D +
Sbjct: 28 FLETVELQIGLKNYDPQ-RDKRFSGTIKLPTVPRPGMTICVLGDQHDLDRAKHHGIDAMS 86
Query: 196 GDDLIEQ------IKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGT-VTTNI 248
DDL + IK ++D +AS D ++K + ++LGP GL K T V+ N
Sbjct: 87 ADDLKKLNKNKKLIKKLARKYDAFLAS-DGLIK--QIPRLLGP-GLSKAGKFPTPVSHNE 142
Query: 249 PQAIE-EFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVY 307
A + K ++++ K + + G ++++L+ N + A+ + + KG + V
Sbjct: 143 DMANKVNDVKSTIKFQLKKVLCLGVAVGNVGMTQEELVANIMLAINYLVSLLKKGWQNV- 201
Query: 308 WKSAYICSSMGPSIRL 323
S I ++M P R+
Sbjct: 202 -GSLVIKATMSPPRRV 216
>UNIPROTKB|E2RQ67 [details] [associations]
symbol:MRPL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0015934 "large ribosomal subunit" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR005879 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 GO:GO:0005739 GO:GO:0006412 GO:GO:0003723
GO:GO:0003735 GO:GO:0015934 SUPFAM:SSF56808 Gene3D:3.30.190.20
Gene3D:3.40.50.790 CTD:65008 GeneTree:ENSGT00390000003587
OMA:HRETHHP InterPro:IPR024663 Pfam:PF13003 TIGRFAMs:TIGR01170
EMBL:AAEX03016692 RefSeq:XP_535620.1 Ensembl:ENSCAFT00000013848
GeneID:478443 KEGG:cfa:478443 Uniprot:E2RQ67
Length = 328
Score = 136 (52.9 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 40/159 (25%), Positives = 75/159 (47%)
Query: 173 KVAVLAQG-EKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILG 231
KVAVL + + A+ GA GG +LI++I ++ D +A P++M ++ L K L
Sbjct: 159 KVAVLTENASEIKIAEENGAAFAGGTNLIQKILDDEIQSDFYVAVPEIMPELNPLKKKLK 218
Query: 232 PRGLMPNPKAGTVTTNIPQAIEEFKKG-KVEYRADKTGIVHIPFGKADFSEDDLLINFLA 290
R P ++ +IP+ +E FK G +++ ++ + D D + N A
Sbjct: 219 KR--FPKLTRNSIGRDIPKMLELFKTGHEIKVDEERENFLETKIATLDMQSDQIAANLQA 276
Query: 291 AVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEML 329
+ + ++P G + A++ +S + L IK +L
Sbjct: 277 VISEVCKHRPLNL-GPFVVRAFLRTSTSEGLLLKIKPLL 314
>CGD|CAL0000752 [details] [associations]
symbol:orf19.5698 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005762 "mitochondrial large
ribosomal subunit" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR002143
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 CGD:CAL0000752 GO:GO:0006412
GO:GO:0003723 GO:GO:0003735 GO:GO:0015934 SUPFAM:SSF56808
eggNOG:COG0081 Gene3D:3.30.190.20 Gene3D:3.40.50.790
EMBL:AACQ01000261 RefSeq:XP_710527.1 ProteinModelPortal:Q59LA1
STRING:Q59LA1 GeneID:3647879 KEGG:cal:CaO19.5698 Uniprot:Q59LA1
Length = 269
Score = 131 (51.2 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 43/173 (24%), Positives = 77/173 (44%)
Query: 162 VSLPKGTGKSVKVAVLA-QGEKFNEAKNAGADLVGGDDLIEQIKGGFME---FDKLIASP 217
V +P + K V Q E K AG + GG +L+++ + F A+
Sbjct: 103 VDIPFPVQRKTKPVVFTTQQPVIEELKKAGIETFGGRELLDKFINQELTPDMFTHAFATQ 162
Query: 218 DMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKA 277
+M + S+ +ILG GL P K GT+T ++ ++ + +++ K + P G
Sbjct: 163 EMAPHLKSVARILGRAGLQPTAKKGTITDDVNTILDVMRSFQIK---QKENHISFPVGNC 219
Query: 278 DFSEDDLLINFLAA---VKS-IEANKPKGAKGVYWKSAYICSSMGPSIRLNIK 326
FS+ ++ N A + S I+AN K + Y YI ++ P + ++ K
Sbjct: 220 TFSDSQIMSNLKAISDEIHSKIDANTTKKTRLGY---CYIGTANSPGLVIDFK 269
>UNIPROTKB|F1RYS1 [details] [associations]
symbol:MRPL1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0015934
"large ribosomal subunit" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR002143 InterPro:IPR005879 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 PIRSF:PIRSF002155
GO:GO:0005739 GO:GO:0006412 GO:GO:0003723 GO:GO:0003735
GO:GO:0015934 SUPFAM:SSF56808 Gene3D:3.30.190.20 Gene3D:3.40.50.790
GeneTree:ENSGT00390000003587 OMA:HRETHHP InterPro:IPR024663
Pfam:PF13003 TIGRFAMs:TIGR01170 EMBL:CU929383
Ensembl:ENSSSCT00000009847 Uniprot:F1RYS1
Length = 278
Score = 131 (51.2 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 43/186 (23%), Positives = 84/186 (45%)
Query: 147 LNIDPKYNDQQLRATVSLPKG-TGKSVKVAVLA-QGEKFNEAKNAGADLVGGDDLIEQIK 204
+ + K + + +SLP T + KVAV + A+ GA GG +LI++I
Sbjct: 82 MTLGKKKKVEPFASVLSLPYPFTSEINKVAVFTGNASEIKIAEEKGAAFAGGTNLIQKIL 141
Query: 205 GGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKG-KVEYR 263
++ D +A P++M ++ L K L R P ++ +IP+ +E FK G +++
Sbjct: 142 DDEIQPDFYVAVPEIMPELNPLRKKLKKR--FPKLTRNSIGRDIPKMLELFKTGHEIKVD 199
Query: 264 ADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRL 323
++ + + S D + N A + + +P G + A++ SS + +
Sbjct: 200 EERENFLETKIATLNMSSDQIAANLQAVINEVCRQRPLNL-GPFVVRAFLRSSTSEGLLI 258
Query: 324 NIKEML 329
I+ +L
Sbjct: 259 KIEPLL 264
>UNIPROTKB|A6QPQ5 [details] [associations]
symbol:MRPL1 "39S ribosomal protein L1, mitochondrial"
species:9913 "Bos taurus" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0015934 "large ribosomal subunit" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR005879 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 GO:GO:0005739 GO:GO:0006412 GO:GO:0003723
GO:GO:0003735 GO:GO:0015934 SUPFAM:SSF56808 Gene3D:3.30.190.20
Gene3D:3.40.50.790 EMBL:BC149433 IPI:IPI00867346
RefSeq:NP_001095314.1 UniGene:Bt.66027 PDB:2FTC PDBsum:2FTC
ProteinModelPortal:A6QPQ5 STRING:A6QPQ5 Ensembl:ENSBTAT00000045390
GeneID:504835 KEGG:bta:504835 CTD:65008 eggNOG:NOG271882
GeneTree:ENSGT00390000003587 HOGENOM:HOG000293225
HOVERGEN:HBG061212 InParanoid:A6QPQ5 OMA:HRETHHP OrthoDB:EOG4K6G54
EvolutionaryTrace:A6QPQ5 NextBio:20866854 InterPro:IPR024663
Pfam:PF13003 TIGRFAMs:TIGR01170 Uniprot:A6QPQ5
Length = 325
Score = 132 (51.5 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 45/186 (24%), Positives = 82/186 (44%)
Query: 147 LNIDPKYNDQQLRATVSLPKG-TGKSVKVAVLA-QGEKFNEAKNAGADLVGGDDLIEQIK 204
+ + K + + +SLP + KVAV + A+ GA GG +LI++I
Sbjct: 129 MTLGKKKKVEPFASVLSLPYPFISEMSKVAVFTGNASEIKIAEENGAAFAGGTNLIQKIL 188
Query: 205 GGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKG-KVEYR 263
++ D IA P++M ++ L K L R P +V +IP+ +E FK G +++
Sbjct: 189 DDEIQADFYIAVPEIMPELNPLRKKLKTR--FPKFNRNSVGRDIPKMLELFKTGLEIKVD 246
Query: 264 ADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRL 323
++ + D D + N A + + +P G + A++ SS + L
Sbjct: 247 EERENFLETKIATLDMPSDQIAANLQAVINEVCRQRPLNL-GPFVVRAFLRSSTSEGLLL 305
Query: 324 NIKEML 329
I+ +L
Sbjct: 306 KIEPLL 311
>DICTYBASE|DDB_G0276871 [details] [associations]
symbol:rpl10a "S60 ribosomal protein L10a"
species:44689 "Dictyostelium discoideum" [GO:0005615 "extracellular
space" evidence=IDA] [GO:0015934 "large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003735 "structural constituent
of ribosome" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR002143 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 dictyBase:DDB_G0276871 Prosite:PS01199
GO:GO:0005615 GO:GO:0006412 GenomeReviews:CM000151_GR GO:GO:0003723
GO:GO:0003735 EMBL:AAFI02000019 GO:GO:0015934 SUPFAM:SSF56808
KO:K02865 eggNOG:COG0081 Gene3D:3.30.190.20 Gene3D:3.40.50.790
RefSeq:XP_642967.1 HSSP:P49626 ProteinModelPortal:Q86L05
STRING:Q86L05 PRIDE:Q86L05 EnsemblProtists:DDB0229949
GeneID:8620839 KEGG:ddi:DDB_G0276871 OMA:ITNDSRE
ProtClustDB:PTZ00029 Uniprot:Q86L05
Length = 217
Score = 127 (49.8 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 50/201 (24%), Positives = 90/201 (44%)
Query: 133 SSTKFTETAEAHFRL-NIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGA 191
S F ET E L N D K D++ + + T + V V A + +EA GA
Sbjct: 23 SKRGFLETVELQINLKNYDTK-KDKRFSGQIKIGTVTKPKLSVCVFADQQHCDEATKIGA 81
Query: 192 DLVG-------GDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTV 244
+ + G + IK ++D +AS ++ +V K+LGP GL K T+
Sbjct: 82 EFMDIEALKKIGPKNKKAIKKLSKKYDAFLASESILRQVP---KLLGP-GLNKVGKFPTL 137
Query: 245 TTNIPQAIEEFK--KGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKG 302
T+ + K V+++ K + + G + +E ++ N + ++ + + KG
Sbjct: 138 LTHSEDMASKINDVKSTVKFQLKKVLCLAVAVGHIELTEREVATNIIQSINFLVSLLKKG 197
Query: 303 AKGVYWKSAYICSSMGPSIRL 323
+ + K+ Y+ +SMGPS R+
Sbjct: 198 WQNI--KTLYVKTSMGPSHRV 216
>CGD|CAL0005037 [details] [associations]
symbol:RPL10A species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] InterPro:IPR002143 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 CGD:CAL0005037 Prosite:PS01199 GO:GO:0006412
GO:GO:0003723 GO:GO:0003735 EMBL:AACQ01000155 EMBL:AACQ01000154
GO:GO:0015934 SUPFAM:SSF56808 KO:K02865 eggNOG:COG0081
HOGENOM:HOG000207014 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 EMBL:AJ011417 RefSeq:XP_712505.1
RefSeq:XP_712535.1 ProteinModelPortal:Q9UVJ4 SMR:Q9UVJ4
STRING:Q9UVJ4 GeneID:3645843 GeneID:3645868 KEGG:cal:CaO19.10969
KEGG:cal:CaO19.3465 Uniprot:Q9UVJ4
Length = 217
Score = 126 (49.4 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 48/195 (24%), Positives = 86/195 (44%)
Query: 137 FTETAEAHFRL-NIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGADLVG 195
F ET E L N DP+ D++ T+ LP+ ++ + + + AK+ G D +
Sbjct: 28 FLETVELQVGLKNYDPQ-RDKRFSGTLKLPQVPRPNMTICIFGDAFDVDRAKSLGVDAMS 86
Query: 196 GDDLIEQ------IKGGFMEFDKLIASPDMMVKVASL-GKILGPRGLMPNPKAGTVTTNI 248
DDL + IK +++ IAS ++ ++ L G L G P P + ++
Sbjct: 87 VDDLKKLNKNKKLIKKLAKKYNAFIASEVLIKQIPRLLGPTLSKAGKFPTPVSHN--DDL 144
Query: 249 PQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYW 308
+ + K ++++ K + + G D ED L+ + A + + K + V
Sbjct: 145 YSKVTDVKS-TIKFQLKKVLCLAVAVGNVDMEEDVLVNQIMMAANFLVSLLKKNWQNV-- 201
Query: 309 KSAYICSSMGPSIRL 323
S I S+MGPS R+
Sbjct: 202 GSLVIKSTMGPSFRI 216
>ZFIN|ZDB-GENE-030131-2025 [details] [associations]
symbol:rpl10a "ribosomal protein L10a"
species:7955 "Danio rerio" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015934 "large
ribosomal subunit" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] InterPro:IPR002143
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199
ZFIN:ZDB-GENE-030131-2025 GO:GO:0006412 GO:GO:0003723 GO:GO:0003735
GO:GO:0015934 SUPFAM:SSF56808 KO:K02865 eggNOG:COG0081
HOGENOM:HOG000207014 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 OMA:MSICILG GeneTree:ENSGT00390000008767
CTD:4736 HOVERGEN:HBG055239 OrthoDB:EOG4HQDKC EMBL:BC059454
EMBL:BC071510 IPI:IPI00500253 RefSeq:NP_955930.1 UniGene:Dr.26808
ProteinModelPortal:Q6PC69 STRING:Q6PC69 PRIDE:Q6PC69
Ensembl:ENSDART00000062983 GeneID:323305 KEGG:dre:323305
InParanoid:Q6PC69 NextBio:20808180 ArrayExpress:Q6PC69 Bgee:Q6PC69
Uniprot:Q6PC69
Length = 216
Score = 124 (48.7 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 56/203 (27%), Positives = 92/203 (45%)
Query: 131 RMSSTKFTETAEAHFRL-NIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNA 189
R KF ET E L N DP+ D++ TV L V VL + +EAK A
Sbjct: 21 RRKKRKFLETVELQISLKNYDPQ-KDKRFSGTVRLKTTPRPKFSVCVLGDQQHCDEAKAA 79
Query: 190 GA---DLVGGDDLIEQ---IKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGT 243
D+ L + +K ++D +AS + ++K + +ILGP GL K +
Sbjct: 80 ELPHMDIEALKKLNKNKKLVKKLAKKYDAFLAS-ESLIK--QIPRILGP-GLNKAGKFPS 135
Query: 244 VTT---NIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKP 300
+ T N+ ++E K ++++ K + + G SE++L+ N AV + +
Sbjct: 136 LLTHNENLGTKVDEVKS-TIKFQMKKVLCLAVAVGHVKMSEEELVYNIHLAVNFLVSLLK 194
Query: 301 KGAKGVYWKSAYICSSMGPSIRL 323
K + V ++ YI S+MG RL
Sbjct: 195 KNWQNV--RALYIKSTMGKPQRL 215
>UNIPROTKB|D4AC74 [details] [associations]
symbol:Mrpl1 "Protein Mrpl1" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0015934 "large ribosomal subunit" evidence=IEA]
InterPro:IPR005879 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 RGD:1306850 GO:GO:0005739 GO:GO:0006412
GO:GO:0003723 GO:GO:0003735 GO:GO:0015934 SUPFAM:SSF56808
Gene3D:3.30.190.20 Gene3D:3.40.50.790 InterPro:IPR024663
Pfam:PF13003 TIGRFAMs:TIGR01170 IPI:IPI00782533
Ensembl:ENSRNOT00000060834 ArrayExpress:D4AC74 Uniprot:D4AC74
Length = 331
Score = 126 (49.4 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 43/177 (24%), Positives = 76/177 (42%)
Query: 160 ATVSLPKGTGKSV-KVAVLA-QGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASP 217
+ ++LP V KVAV + A+ GA GG DL+++I + D +A P
Sbjct: 147 SVIALPHPFSSEVNKVAVFTGNASEIKIAEENGAAFAGGADLVKKILDDEVVVDFYVAVP 206
Query: 218 DMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKG-KVEYRADKTGIVHIPFGK 276
++M ++ L K L R P ++ +IP+ +E FK ++ ++ +
Sbjct: 207 EIMGELNPLRKKLKKR--FPKATRNSIGRDIPKMLELFKTAHEIMVDEERQNFLSTKIAT 264
Query: 277 ADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLDYKL 333
D D L N A + + ++P G + A++ SS + L +L KL
Sbjct: 265 LDMPSDQLAANLQAVINEVCRHRPLNL-GPFVVRAFLRSSTSEGLLLKTDSLLPKKL 320
>MGI|MGI:2137202 [details] [associations]
symbol:Mrpl1 "mitochondrial ribosomal protein L1"
species:10090 "Mus musculus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=ISO] [GO:0005622 "intracellular" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005762 "mitochondrial large
ribosomal subunit" evidence=ISO] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=ISO] [GO:0015934
"large ribosomal subunit" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR005879
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
EMBL:AB049632 MGI:MGI:2137202 GO:GO:0005739 GO:GO:0006412
GO:GO:0003723 GO:GO:0003735 GO:GO:0015934 SUPFAM:SSF56808
eggNOG:COG0081 Gene3D:3.30.190.20 Gene3D:3.40.50.790 CTD:65008
GeneTree:ENSGT00390000003587 HOGENOM:HOG000293225
HOVERGEN:HBG061212 OrthoDB:EOG4K6G54 InterPro:IPR024663
Pfam:PF13003 TIGRFAMs:TIGR01170 EMBL:AK010343 EMBL:AK142249
EMBL:BC028774 EMBL:BC061042 IPI:IPI00118237 RefSeq:NP_444388.2
UniGene:Mm.295499 ProteinModelPortal:Q99N96 SMR:Q99N96
STRING:Q99N96 PhosphoSite:Q99N96 PaxDb:Q99N96 PRIDE:Q99N96
Ensembl:ENSMUST00000036437 Ensembl:ENSMUST00000117766 GeneID:94061
KEGG:mmu:94061 UCSC:uc008yfi.1 InParanoid:Q99N96 OMA:IQNGWTD
NextBio:352027 Bgee:Q99N96 CleanEx:MM_MRPL1 Genevestigator:Q99N96
GermOnline:ENSMUSG00000029486 Uniprot:Q99N96
Length = 336
Score = 122 (48.0 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 41/173 (23%), Positives = 75/173 (43%)
Query: 160 ATVSLPKGTGKSV-KVAVL-AQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASP 217
+ ++LP V KVAV A + A+ GA GG DL+++I + D +A P
Sbjct: 147 SVIALPHLFSSEVNKVAVFTANASEIKIAEENGAAFAGGTDLVKKIMDDEVVVDFYVAVP 206
Query: 218 DMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKG-KVEYRADKTGIVHIPFGK 276
++M ++ L K L R P ++ +IP+ +E FK ++ ++ +
Sbjct: 207 EIMGELNPLRKKLKKR--FPKATRNSIGRDIPKMLELFKTAHEIMVDEERQNFLSTKIAT 264
Query: 277 ADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEML 329
D D + N A + + ++P G + A++ SS + L +L
Sbjct: 265 LDMPSDQIAANLQAVINEVCKHRPLNL-GPFVVRAFLRSSTSEGLLLKTDSLL 316
>RGD|1306850 [details] [associations]
symbol:Mrpl1 "mitochondrial ribosomal protein L1" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0006412
"translation" evidence=IEA] [GO:0015934 "large ribosomal subunit"
evidence=IEA] InterPro:IPR005879 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 RGD:1306850 GO:GO:0005739
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 GO:GO:0015934
SUPFAM:SSF56808 Gene3D:3.30.190.20 Gene3D:3.40.50.790
GeneTree:ENSGT00390000003587 InterPro:IPR024663 Pfam:PF13003
TIGRFAMs:TIGR01170 IPI:IPI00764993 Ensembl:ENSRNOT00000002834
UCSC:RGD:1306850 ArrayExpress:F1M9A4 Uniprot:F1M9A4
Length = 322
Score = 120 (47.3 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 41/173 (23%), Positives = 74/173 (42%)
Query: 160 ATVSLPKGTGKSV-KVAVLA-QGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASP 217
+ ++LP V KVAV + A+ GA GG DL+++I + D +A P
Sbjct: 144 SVIALPHPFSSEVNKVAVFTGNASEIKIAEENGAAFAGGADLVKKILDDEVVVDFYVAVP 203
Query: 218 DMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKG-KVEYRADKTGIVHIPFGK 276
++M ++ L K L R P ++ +IP+ +E FK ++ ++ +
Sbjct: 204 EIMGELNPLRKKLKKR--FPKATRNSIGRDIPKMLELFKTAHEIMVDEERQNFLSTKIAT 261
Query: 277 ADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEML 329
D D L N A + + ++P G + A++ SS + L +L
Sbjct: 262 LDMPSDQLAANLQAVINEVCRHRPLNL-GPFVVRAFLRSSTSEGLLLKTDSLL 313
>UNIPROTKB|Q5E9E6 [details] [associations]
symbol:RPL10A "60S ribosomal protein L10a" species:9913
"Bos taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0015934
"large ribosomal subunit" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR002143 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 GO:GO:0015934
SUPFAM:SSF56808 KO:K02865 eggNOG:COG0081 HOGENOM:HOG000207014
Gene3D:3.30.190.20 Gene3D:3.40.50.790 InterPro:IPR023673
OMA:GPRNKMP GeneTree:ENSGT00390000008767 EMBL:BT020974
EMBL:BC102653 IPI:IPI00710091 RefSeq:NP_001015647.1
UniGene:Bt.49789 UniGene:Bt.63495 ProteinModelPortal:Q5E9E6
SMR:Q5E9E6 STRING:Q5E9E6 PRIDE:Q5E9E6 Ensembl:ENSBTAT00000025963
GeneID:533310 KEGG:bta:533310 CTD:4736 HOVERGEN:HBG055239
InParanoid:Q5E9E6 OrthoDB:EOG4HQDKC NextBio:20875996 Uniprot:Q5E9E6
Length = 217
Score = 116 (45.9 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 53/198 (26%), Positives = 90/198 (45%)
Query: 136 KFTETAEAHFRL-NIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGA--- 191
KF ET E L N DP+ D++ TV L V VL + +EAK
Sbjct: 27 KFLETVELQISLKNYDPQ-KDKRFSGTVRLKSTPRPKFSVCVLGDQQHCDEAKAVDIPHM 85
Query: 192 DLVGGDDLIEQ---IKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTT-- 246
D+ L + +K ++D +AS + ++K + +ILGP GL K ++ T
Sbjct: 86 DIEALKKLNKNKKLVKKLAKKYDAFLAS-ESLIK--QIPRILGP-GLNKAGKFPSLLTHN 141
Query: 247 -NIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKG 305
N+ ++E K ++++ K + + G ++D+L+ N AV + + K +
Sbjct: 142 ENMVAKVDEVKS-TIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLKKNWQN 200
Query: 306 VYWKSAYICSSMGPSIRL 323
V ++ YI S+MG RL
Sbjct: 201 V--RALYIKSTMGKPQRL 216
>UNIPROTKB|E2R9V0 [details] [associations]
symbol:RPL10A "Ribosomal protein" species:9615 "Canis lupus
familiaris" [GO:0015934 "large ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR002143 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006412 GO:GO:0003723
GO:GO:0003735 GO:GO:0015934 SUPFAM:SSF56808 Gene3D:3.30.190.20
Gene3D:3.40.50.790 InterPro:IPR023673 OMA:MSICILG
GeneTree:ENSGT00390000008767 EMBL:AAEX03008269
ProteinModelPortal:E2R9V0 PRIDE:E2R9V0 Ensembl:ENSCAFT00000002038
NextBio:20850823 Uniprot:E2R9V0
Length = 217
Score = 116 (45.9 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 53/198 (26%), Positives = 90/198 (45%)
Query: 136 KFTETAEAHFRL-NIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGA--- 191
KF ET E L N DP+ D++ TV L V VL + +EAK
Sbjct: 27 KFLETVELQISLKNYDPQ-KDKRFSGTVRLKSTPRPKFSVCVLGDQQHCDEAKAVDIPHM 85
Query: 192 DLVGGDDLIEQ---IKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTT-- 246
D+ L + +K ++D +AS + ++K + +ILGP GL K ++ T
Sbjct: 86 DIEALKKLNKNKKLVKKLAKKYDAFLAS-ESLIK--QIPRILGP-GLNKAGKFPSLLTHN 141
Query: 247 -NIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKG 305
N+ ++E K ++++ K + + G ++D+L+ N AV + + K +
Sbjct: 142 ENMVAKVDEVKS-TIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLKKNWQN 200
Query: 306 VYWKSAYICSSMGPSIRL 323
V ++ YI S+MG RL
Sbjct: 201 V--RALYIKSTMGKPQRL 216
>UNIPROTKB|P62906 [details] [associations]
symbol:RPL10A "60S ribosomal protein L10a" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0006412
"translation" evidence=NAS;TAS] [GO:0003735 "structural constituent
of ribosome" evidence=NAS] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=IDA] [GO:0009653 "anatomical structure
morphogenesis" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006413 "translational initiation" evidence=TAS] [GO:0006414
"translational elongation" evidence=TAS] [GO:0006415 "translational
termination" evidence=TAS] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0019058 "viral infectious cycle" evidence=TAS] [GO:0019083
"viral transcription" evidence=TAS] [GO:0044267 "cellular protein
metabolic process" evidence=TAS] [GO:0000184 "nuclear-transcribed
mRNA catabolic process, nonsense-mediated decay" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR002143 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199
GO:GO:0005739 Reactome:REACT_116125 EMBL:CH471081 GO:GO:0000184
GO:GO:0006413 GO:GO:0003723 GO:GO:0003735 GO:GO:0009653
SUPFAM:SSF56808 GO:GO:0006415 GO:GO:0006414 Reactome:REACT_1762
EMBL:AL022721 KO:K02865 GO:GO:0006614 GO:GO:0022625 GO:GO:0019083
eggNOG:COG0081 HOGENOM:HOG000207014 Gene3D:3.30.190.20
Gene3D:3.40.50.790 InterPro:IPR023673 OMA:MSICILG CTD:4736
HOVERGEN:HBG055239 OrthoDB:EOG4HQDKC EMBL:U12404 EMBL:AB082926
EMBL:BT020040 EMBL:BT020041 EMBL:AK313181 EMBL:BC006791
EMBL:BC011366 EMBL:BC070216 IPI:IPI00412579 RefSeq:NP_009035.3
UniGene:Hs.148340 UniGene:Hs.546269 ProteinModelPortal:P62906
SMR:P62906 IntAct:P62906 MINT:MINT-4999991 STRING:P62906
PhosphoSite:P62906 DMDM:51702773 SWISS-2DPAGE:P62906 PaxDb:P62906
PRIDE:P62906 DNASU:4736 Ensembl:ENST00000322203 GeneID:4736
KEGG:hsa:4736 UCSC:uc003okp.1 GeneCards:GC06P035582 HGNC:HGNC:10299
neXtProt:NX_P62906 PharmGKB:PA34661 InParanoid:P62906
PhylomeDB:P62906 ChiTaRS:RPL10A GenomeRNAi:4736 NextBio:18266
Bgee:P62906 CleanEx:HS_RPL10A Genevestigator:P62906
GermOnline:ENSG00000198755 Uniprot:P62906
Length = 217
Score = 116 (45.9 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 53/198 (26%), Positives = 90/198 (45%)
Query: 136 KFTETAEAHFRL-NIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGA--- 191
KF ET E L N DP+ D++ TV L V VL + +EAK
Sbjct: 27 KFLETVELQISLKNYDPQ-KDKRFSGTVRLKSTPRPKFSVCVLGDQQHCDEAKAVDIPHM 85
Query: 192 DLVGGDDLIEQ---IKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTT-- 246
D+ L + +K ++D +AS + ++K + +ILGP GL K ++ T
Sbjct: 86 DIEALKKLNKNKKLVKKLAKKYDAFLAS-ESLIK--QIPRILGP-GLNKAGKFPSLLTHN 141
Query: 247 -NIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKG 305
N+ ++E K ++++ K + + G ++D+L+ N AV + + K +
Sbjct: 142 ENMVAKVDEVKS-TIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLKKNWQN 200
Query: 306 VYWKSAYICSSMGPSIRL 323
V ++ YI S+MG RL
Sbjct: 201 V--RALYIKSTMGKPQRL 216
>RGD|620497 [details] [associations]
symbol:Rpl10a "ribosomal protein L10A" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0006412 "translation"
evidence=IEA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=ISO;TAS] InterPro:IPR002143 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 RGD:620497 Prosite:PS01199 GO:GO:0006412
GO:GO:0003723 GO:GO:0003735 SUPFAM:SSF56808 KO:K02865 GO:GO:0022625
eggNOG:COG0081 HOGENOM:HOG000207014 Gene3D:3.30.190.20
Gene3D:3.40.50.790 InterPro:IPR023673 OMA:GPRNKMP
GeneTree:ENSGT00390000008767 CTD:4736 HOVERGEN:HBG055239
OrthoDB:EOG4HQDKC EMBL:X93352 EMBL:BC058468 IPI:IPI00339012
PIR:JC4677 RefSeq:NP_112327.1 UniGene:Rn.161731 UniGene:Rn.2262
ProteinModelPortal:P62907 SMR:P62907 IntAct:P62907 STRING:P62907
PhosphoSite:P62907 PRIDE:P62907 Ensembl:ENSRNOT00000000603
GeneID:81729 KEGG:rno:81729 UCSC:RGD:620497 InParanoid:P62907
NextBio:615392 Genevestigator:P62907 GermOnline:ENSRNOG00000000505
Uniprot:P62907
Length = 217
Score = 116 (45.9 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 53/198 (26%), Positives = 90/198 (45%)
Query: 136 KFTETAEAHFRL-NIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGA--- 191
KF ET E L N DP+ D++ TV L V VL + +EAK
Sbjct: 27 KFLETVELQISLKNYDPQ-KDKRFSGTVRLKSTPRPKFSVCVLGDQQHCDEAKAVDIPHM 85
Query: 192 DLVGGDDLIEQ---IKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTT-- 246
D+ L + +K ++D +AS + ++K + +ILGP GL K ++ T
Sbjct: 86 DIEALKKLNKNKKLVKKLAKKYDAFLAS-ESLIK--QIPRILGP-GLNKAGKFPSLLTHN 141
Query: 247 -NIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKG 305
N+ ++E K ++++ K + + G ++D+L+ N AV + + K +
Sbjct: 142 ENMVAKVDEVKS-TIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLKKNWQN 200
Query: 306 VYWKSAYICSSMGPSIRL 323
V ++ YI S+MG RL
Sbjct: 201 V--RALYIKSTMGKPQRL 216
>SGD|S000006141 [details] [associations]
symbol:RPL1A "Ribosomal 60S subunit protein L1A" species:4932
"Saccharomyces cerevisiae" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA;TAS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0002181 "cytoplasmic translation" evidence=TAS]
[GO:0006412 "translation" evidence=IEA] [GO:0015934 "large
ribosomal subunit" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=TAS] [GO:0005840 "ribosome" evidence=IEA]
InterPro:IPR002143 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155 SGD:S000006141
Prosite:PS01199 GO:GO:0003723 EMBL:BK006949 GO:GO:0003735
GO:GO:0002181 SUPFAM:SSF56808 RefSeq:NP_011380.3 GeneID:852742
KEGG:sce:YGL135W KO:K02865 GO:GO:0022625 KO:K00987
RefSeq:NP_011385.3 GeneID:852747 KEGG:sce:YGL130W
Gene3D:3.30.190.20 Gene3D:3.40.50.790 InterPro:IPR023673 PDB:1K5Y
PDB:1S1I PDB:3IZS PDB:3O58 PDB:3O5H PDBsum:1K5Y PDBsum:1S1I
PDBsum:3IZS PDBsum:3O58 PDBsum:3O5H PDB:2NOQ PDBsum:2NOQ
EMBL:X70985 EMBL:Z73576 PIR:S53893 RefSeq:NP_015104.1
ProteinModelPortal:P0CX43 SMR:P0CX43 EnsemblFungi:YGL135W
EnsemblFungi:YPL220W GeneID:855881 KEGG:sce:YPL220W CYGD:YPL220w
EvolutionaryTrace:P0CX43 NextBio:972159 ArrayExpress:P0CX43
GermOnline:YPL220W Uniprot:P0CX43
Length = 217
Score = 115 (45.5 bits), Expect = 0.00011, P = 0.00011
Identities = 47/195 (24%), Positives = 85/195 (43%)
Query: 137 FTETAEAHFRL-NIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGADLVG 195
F ET E L N DP+ D++ ++ LP ++ + + + AK+ G D +
Sbjct: 28 FLETVELQVGLKNYDPQ-RDKRFSGSLKLPNCPRPNMSICIFGDAFDVDRAKSCGVDAMS 86
Query: 196 GDDLIEQ------IKGGFMEFDKLIASPDMMVKVASL-GKILGPRGLMPNPKAGTVTTNI 248
DDL + IK +++ IAS ++ +V L G L G P P + ++
Sbjct: 87 VDDLKKLNKNKKLIKKLSKKYNAFIASEVLIKQVPRLLGPQLSKAGKFPTPVSHN--DDL 144
Query: 249 PQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYW 308
+ + + ++++ K + + G + ED L+ L +V + K + V
Sbjct: 145 YGKVTDVRS-TIKFQLKKVLCLAVAVGNVEMEEDVLVNQILMSVNFFVSLLKKNWQNV-- 201
Query: 309 KSAYICSSMGPSIRL 323
S + SSMGP+ RL
Sbjct: 202 GSLVVKSSMGPAFRL 216
>SGD|S000003103 [details] [associations]
symbol:RPL1B "Ribosomal 60S subunit protein L1B" species:4932
"Saccharomyces cerevisiae" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA;TAS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0002181 "cytoplasmic translation" evidence=TAS]
[GO:0006412 "translation" evidence=IEA] [GO:0015934 "large
ribosomal subunit" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=TAS] [GO:0005840 "ribosome" evidence=IEA]
InterPro:IPR002143 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155 SGD:S000003103
Prosite:PS01199 EMBL:BK006941 GO:GO:0003723 GO:GO:0003735
GO:GO:0002181 SUPFAM:SSF56808 EMBL:X92670 RefSeq:NP_011380.3
GeneID:852742 KEGG:sce:YGL135W KO:K02865 GO:GO:0022625 KO:K00987
RefSeq:NP_011385.3 GeneID:852747 KEGG:sce:YGL130W
Gene3D:3.30.190.20 Gene3D:3.40.50.790 InterPro:IPR023673
GeneTree:ENSGT00390000008767 PIR:S53893 RefSeq:NP_015104.1
EnsemblFungi:YGL135W EnsemblFungi:YPL220W GeneID:855881
KEGG:sce:YPL220W NextBio:972159 EMBL:X70986 EMBL:Z72657
ProteinModelPortal:P0CX44 SMR:P0CX44 CYGD:YGL135w
ArrayExpress:P0CX44 GermOnline:YGL135W Uniprot:P0CX44
Length = 217
Score = 115 (45.5 bits), Expect = 0.00011, P = 0.00011
Identities = 47/195 (24%), Positives = 85/195 (43%)
Query: 137 FTETAEAHFRL-NIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGADLVG 195
F ET E L N DP+ D++ ++ LP ++ + + + AK+ G D +
Sbjct: 28 FLETVELQVGLKNYDPQ-RDKRFSGSLKLPNCPRPNMSICIFGDAFDVDRAKSCGVDAMS 86
Query: 196 GDDLIEQ------IKGGFMEFDKLIASPDMMVKVASL-GKILGPRGLMPNPKAGTVTTNI 248
DDL + IK +++ IAS ++ +V L G L G P P + ++
Sbjct: 87 VDDLKKLNKNKKLIKKLSKKYNAFIASEVLIKQVPRLLGPQLSKAGKFPTPVSHN--DDL 144
Query: 249 PQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYW 308
+ + + ++++ K + + G + ED L+ L +V + K + V
Sbjct: 145 YGKVTDVRS-TIKFQLKKVLCLAVAVGNVEMEEDVLVNQILMSVNFFVSLLKKNWQNV-- 201
Query: 309 KSAYICSSMGPSIRL 323
S + SSMGP+ RL
Sbjct: 202 GSLVVKSSMGPAFRL 216
>FB|FBgn0036213 [details] [associations]
symbol:RpL10Ab "Ribosomal protein L10Ab" species:7227
"Drosophila melanogaster" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=ISS]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0007052 "mitotic spindle organization"
evidence=IMP] [GO:0000022 "mitotic spindle elongation"
evidence=IMP] [GO:0051298 "centrosome duplication" evidence=IMP]
InterPro:IPR002143 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199
EMBL:AE014296 GO:GO:0051298 GO:GO:0005811 GO:GO:0006412
GO:GO:0003723 GO:GO:0003735 GO:GO:0000022 GO:GO:0015934
SUPFAM:SSF56808 KO:K02865 eggNOG:COG0081 Gene3D:3.30.190.20
Gene3D:3.40.50.790 OMA:GPRNKMP EMBL:BT014654 RefSeq:NP_648514.1
UniGene:Dm.23143 ProteinModelPortal:Q9VTP4 SMR:Q9VTP4 IntAct:Q9VTP4
MINT:MINT-1551463 STRING:Q9VTP4 PaxDb:Q9VTP4 PRIDE:Q9VTP4
EnsemblMetazoa:FBtr0076032 GeneID:39338 KEGG:dme:Dmel_CG7283
CTD:39338 FlyBase:FBgn0036213 GeneTree:ENSGT00390000008767
InParanoid:Q9VTP4 OrthoDB:EOG4T76KC PhylomeDB:Q9VTP4
ChiTaRS:RpL10Ab GenomeRNAi:39338 NextBio:813157 Bgee:Q9VTP4
GermOnline:CG7283 Uniprot:Q9VTP4
Length = 217
Score = 114 (45.2 bits), Expect = 0.00014, P = 0.00014
Identities = 54/195 (27%), Positives = 83/195 (42%)
Query: 137 FTETAEAHFRL-NIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGADLVG 195
F ET E L N DP+ D++ TV L +KV +L + +EAK D +
Sbjct: 28 FLETVELQIGLKNYDPQ-KDKRFSGTVKLKHIPRPKMKVCILGDQQHCDEAKANNVDFMD 86
Query: 196 GDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPN-PKAGTVTTNIPQA--- 251
+ L + K + KL S D + SL K + PR L P KAG +
Sbjct: 87 AEALKKLNKNKKL-VKKLAKSYDAFLASESLIKQI-PRLLGPGLNKAGKFPALLSHQESM 144
Query: 252 ---IEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYW 308
IEE K ++++ K + + G D+L N ++ + + K + V
Sbjct: 145 IGKIEEVKS-TIKFQMKKVLCLSVAVGHVGMKSDELAQNVNLSINFLVSLLKKNWQNV-- 201
Query: 309 KSAYICSSMGPSIRL 323
+S ++ SSMGP RL
Sbjct: 202 RSLHVKSSMGPPQRL 216
>GENEDB_PFALCIPARUM|PF14_0391 [details] [associations]
symbol:PF14_0391 "ribosomal protein L1,
putative" species:5833 "Plasmodium falciparum" [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISS]
InterPro:IPR002143 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155 GO:GO:0006412
GO:GO:0003723 GO:GO:0003735 EMBL:AE014187 SUPFAM:SSF56808 KO:K02865
GO:GO:0022625 HOGENOM:HOG000207014 Gene3D:3.30.190.20
Gene3D:3.40.50.790 OMA:GPRNKMP ProtClustDB:PTZ00029
RefSeq:XP_001348565.1 ProteinModelPortal:Q8IL58 MINT:MINT-1664387
PRIDE:Q8IL58 EnsemblProtists:PF14_0391:mRNA GeneID:811973
KEGG:pfa:PF14_0391 EuPathDB:PlasmoDB:PF3D7_1441200 Uniprot:Q8IL58
Length = 217
Score = 114 (45.2 bits), Expect = 0.00014, P = 0.00014
Identities = 48/202 (23%), Positives = 88/202 (43%)
Query: 131 RMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAG 190
+ KF ET E L D++ TV L K +KV +L EA+
Sbjct: 21 KQKKRKFVETIELQIGLKDYDTQRDKRFSGTVRLSNEVRKKLKVCILGDAVHVEEAQKLE 80
Query: 191 ADLVGGDDLIEQIKGGFM------EFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTV 244
D + + + + K + ++D +AS V + + K+LGP GL K ++
Sbjct: 81 LDYMDIEAMKKLNKDKTLVKKLAKKYDAFLAS---QVILPQIPKLLGP-GLNKAGKFPSL 136
Query: 245 TTN---IPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPK 301
T+ I I E K ++++ K + +P G A+ E++L N + A+ + + K
Sbjct: 137 ITHNDKINDKILELKSS-IKFQLKKVLCMGVPVGHANLKEEELRSNIVHAINFLVSLLKK 195
Query: 302 GAKGVYWKSAYICSSMGPSIRL 323
+ + ++ +I S+MG R+
Sbjct: 196 NWQNI--RTLHIKSTMGKPQRI 215
>UNIPROTKB|Q8IL58 [details] [associations]
symbol:PF14_0391 "60S ribosomal protein L1, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISS] InterPro:IPR002143
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 GO:GO:0006412 GO:GO:0003723
GO:GO:0003735 EMBL:AE014187 SUPFAM:SSF56808 KO:K02865 GO:GO:0022625
HOGENOM:HOG000207014 Gene3D:3.30.190.20 Gene3D:3.40.50.790
OMA:GPRNKMP ProtClustDB:PTZ00029 RefSeq:XP_001348565.1
ProteinModelPortal:Q8IL58 MINT:MINT-1664387 PRIDE:Q8IL58
EnsemblProtists:PF14_0391:mRNA GeneID:811973 KEGG:pfa:PF14_0391
EuPathDB:PlasmoDB:PF3D7_1441200 Uniprot:Q8IL58
Length = 217
Score = 114 (45.2 bits), Expect = 0.00014, P = 0.00014
Identities = 48/202 (23%), Positives = 88/202 (43%)
Query: 131 RMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAG 190
+ KF ET E L D++ TV L K +KV +L EA+
Sbjct: 21 KQKKRKFVETIELQIGLKDYDTQRDKRFSGTVRLSNEVRKKLKVCILGDAVHVEEAQKLE 80
Query: 191 ADLVGGDDLIEQIKGGFM------EFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTV 244
D + + + + K + ++D +AS V + + K+LGP GL K ++
Sbjct: 81 LDYMDIEAMKKLNKDKTLVKKLAKKYDAFLAS---QVILPQIPKLLGP-GLNKAGKFPSL 136
Query: 245 TTN---IPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPK 301
T+ I I E K ++++ K + +P G A+ E++L N + A+ + + K
Sbjct: 137 ITHNDKINDKILELKSS-IKFQLKKVLCMGVPVGHANLKEEELRSNIVHAINFLVSLLKK 195
Query: 302 GAKGVYWKSAYICSSMGPSIRL 323
+ + ++ +I S+MG R+
Sbjct: 196 NWQNI--RTLHIKSTMGKPQRI 215
>UNIPROTKB|E1BKD0 [details] [associations]
symbol:E1BKD0 "Ribosomal protein" species:9913 "Bos taurus"
[GO:0015934 "large ribosomal subunit" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR002143 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 GO:GO:0015934
SUPFAM:SSF56808 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 GeneTree:ENSGT00390000008767 EMBL:DAAA02006245
IPI:IPI00730587 Ensembl:ENSBTAT00000002846 OMA:MEDEAIA
NextBio:20928490 Uniprot:E1BKD0
Length = 217
Score = 112 (44.5 bits), Expect = 0.00025, P = 0.00025
Identities = 50/193 (25%), Positives = 88/193 (45%)
Query: 136 KFTETAEAHFRL-NIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAG---A 191
KF ET E L N DP+ D++ TV L V VL + +EAK
Sbjct: 27 KFLETVELQISLKNYDPQ-KDKRFSGTVRLKSTPRPKFSVCVLGDQQHCDEAKAVDIPHV 85
Query: 192 DLVGGDDLIEQ---IKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTT-- 246
D+ L + +K ++D +AS + ++K + +ILGP GL K ++ T
Sbjct: 86 DIEALKKLNKNKKLVKKLAKKYDAFLAS-ESLIK--QIPRILGP-GLNKAGKFPSLLTHN 141
Query: 247 -NIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKG 305
N+ ++E K ++++ K + + G ++D+L+ N AV + + K +
Sbjct: 142 GNMVAKVDEVKS-TIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLKKNWQN 200
Query: 306 VYWKSAYICSSMG 318
+ ++ YI S+MG
Sbjct: 201 I--RALYIKSTMG 211
>MGI|MGI:1343877 [details] [associations]
symbol:Rpl10a "ribosomal protein L10A" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015934
"large ribosomal subunit" evidence=IEA] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISO] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR002143
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 MGI:MGI:1343877 Prosite:PS01199
GO:GO:0005739 GO:GO:0006412 GO:GO:0003723 GO:GO:0003735
GO:GO:0015934 SUPFAM:SSF56808 eggNOG:COG0081 HOGENOM:HOG000207014
Gene3D:3.30.190.20 Gene3D:3.40.50.790 InterPro:IPR023673
HOVERGEN:HBG055239 OrthoDB:EOG4HQDKC ChiTaRS:RPL10A EMBL:U12403
EMBL:D10916 IPI:IPI00127085 UniGene:Mm.336955 UniGene:Mm.467207
ProteinModelPortal:P53026 SMR:P53026 IntAct:P53026 STRING:P53026
PhosphoSite:P53026 PaxDb:P53026 PRIDE:P53026 InParanoid:P53026
CleanEx:MM_RPL10A Genevestigator:P53026
GermOnline:ENSMUSG00000037805 GermOnline:ENSMUSG00000061631
Uniprot:P53026
Length = 217
Score = 111 (44.1 bits), Expect = 0.00032, P = 0.00032
Identities = 52/198 (26%), Positives = 89/198 (44%)
Query: 136 KFTETAEAHFRL-NIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGA--- 191
KF ET E L N DP+ D++ TV L V VL + +E K
Sbjct: 27 KFLETVELQISLKNYDPQ-KDKRFSGTVRLKSTPRPKFSVCVLGDQQHCDERKAVDIPHM 85
Query: 192 DLVGGDDLIEQ---IKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTT-- 246
D+ L + +K ++D +AS + ++K + +ILGP GL K ++ T
Sbjct: 86 DIEALKKLNKNKKLVKKLAKKYDAFLAS-ESLIK--QIPRILGP-GLNKAGKFPSLLTHN 141
Query: 247 -NIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKG 305
N+ ++E K ++++ K + + G ++D+L+ N AV + + K +
Sbjct: 142 ENMVAKVDEVKS-TIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLKKNWQN 200
Query: 306 VYWKSAYICSSMGPSIRL 323
V ++ YI S+MG RL
Sbjct: 201 V--RALYIKSTMGKPQRL 216
>UNIPROTKB|G3X7N2 [details] [associations]
symbol:G3X7N2 "Ribosomal protein" species:9913 "Bos taurus"
[GO:0015934 "large ribosomal subunit" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR002143 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 GO:GO:0015934
SUPFAM:SSF56808 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 GeneTree:ENSGT00390000008767 EMBL:DAAA02002354
Ensembl:ENSBTAT00000039021 OMA:EHIYENI NextBio:20924953
Uniprot:G3X7N2
Length = 217
Score = 109 (43.4 bits), Expect = 0.00056, P = 0.00056
Identities = 52/198 (26%), Positives = 89/198 (44%)
Query: 136 KFTETAEAHFRL-NIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAG---A 191
KF ET + L N DP+ D++ TV L V VL + +EAK
Sbjct: 27 KFLETVKLQISLKNYDPQ-KDKRFSGTVRLKSTPRPKFSVCVLGDQQHCDEAKAVDIPHT 85
Query: 192 DLVGGDDLIEQ---IKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTT-- 246
D+ L + +K ++D +AS + ++K + +ILGP GL K ++ T
Sbjct: 86 DIEALKKLNKNKKLVKKLAKKYDAFLAS-ESLIK--QIPRILGP-GLNKAGKFPSLLTHN 141
Query: 247 -NIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKG 305
N+ + E K ++++ K + + G ++D+L+ N AV + + K +
Sbjct: 142 ENMVAKVGEVKS-TIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLKKNWQN 200
Query: 306 VYWKSAYICSSMGPSIRL 323
V ++ YI S+MG RL
Sbjct: 201 V--RALYIKSTMGKPQRL 216
>RGD|1566137 [details] [associations]
symbol:RGD1566137 "similar to ribosomal protein L10a"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015934
"large ribosomal subunit" evidence=IEA] InterPro:IPR002143
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 RGD:1566137 Prosite:PS01199
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 GO:GO:0015934
SUPFAM:SSF56808 OMA:VAVGHMK Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 GeneTree:ENSGT00390000008767 OrthoDB:EOG4HQDKC
EMBL:AC095904 IPI:IPI00369431 RefSeq:XP_001071067.1
RefSeq:XP_217361.3 Ensembl:ENSRNOT00000044603 GeneID:301299
KEGG:rno:301299 UCSC:RGD:1566137 CTD:301299 NextBio:648511
Uniprot:D4A7Y6
Length = 217
Score = 108 (43.1 bits), Expect = 0.00073, P = 0.00073
Identities = 51/193 (26%), Positives = 88/193 (45%)
Query: 136 KFTETAEAHFRL-NIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGA--- 191
KF ET E L N DP+ D++ TV L V VL + +EAK
Sbjct: 27 KFLETVELQISLKNYDPQ-KDKRFSGTVRLKSTPRPKFSVCVLGDQQHCDEAKAVDIPHM 85
Query: 192 DLVGGDDLIEQ---IKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTT-- 246
D+ L + +K ++D +AS + ++K + +ILGP GL K ++ T
Sbjct: 86 DIEALKKLNKNKKLVKKLDKKYDGFLAS-ESLIK--QIPRILGP-GLNKAGKFPSLLTHN 141
Query: 247 -NIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKG 305
N+ ++E K ++++ K + + G ++D+L+ N AV + + K +
Sbjct: 142 ENMVAKVDEVKS-TIKFQMKKLLCLAVAVGHMKMTDDELVYNIHLAVNFLVSLLKKNWQN 200
Query: 306 VYWKSAYICSSMG 318
V ++ YI S+MG
Sbjct: 201 V--RALYIKSTMG 211
>RGD|1559639 [details] [associations]
symbol:RGD1559639 "similar to ribosomal protein L10a"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015934
"large ribosomal subunit" evidence=IEA] InterPro:IPR002143
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 RGD:1559639 Prosite:PS01199
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 GO:GO:0015934
SUPFAM:SSF56808 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 GeneTree:ENSGT00390000008767 OrthoDB:EOG4HQDKC
IPI:IPI00781415 RefSeq:XP_001080284.1 RefSeq:XP_345687.1
Ensembl:ENSRNOT00000059150 GeneID:366656 KEGG:rno:366656
UCSC:RGD:1559639 CTD:366656 NextBio:689802 Uniprot:D3ZBX4
Length = 217
Score = 107 (42.7 bits), Expect = 0.00096, P = 0.00096
Identities = 51/193 (26%), Positives = 87/193 (45%)
Query: 136 KFTETAEAHFRL-NIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGA--- 191
KF ET E L N DP+ D++ TV L V VL + +EAK
Sbjct: 27 KFLETVELQISLKNYDPQ-KDKRFSGTVRLKSTPRPKFSVCVLGDQQHCDEAKVVDIPHM 85
Query: 192 DLVGGDDLIEQ---IKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTT-- 246
D+ L + +K ++D +AS + ++K + +ILGP GL K ++ T
Sbjct: 86 DIEALKKLNKNKKLVKKLAKKYDAFLAS-ESLIK--QIPRILGP-GLNKVGKFPSLMTHN 141
Query: 247 -NIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKG 305
N+ ++E K ++++ K + + G ++D L+ N AV + + K +
Sbjct: 142 ENMVAKVDEVKS-TIKFQMKKVLCLAVAVGHVKMTDDKLVYNIHLAVNFLVSLLKKNWQN 200
Query: 306 VYWKSAYICSSMG 318
V ++ YI S+MG
Sbjct: 201 V--RALYIKSTMG 211
>TAIR|locus:2176337 [details] [associations]
symbol:AT5G22440 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0015934 "large ribosomal subunit"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0001510 "RNA methylation" evidence=RCA]
[GO:0006364 "rRNA processing" evidence=RCA] InterPro:IPR002143
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 GO:GO:0006412 GO:GO:0003723
GO:GO:0003735 EMBL:AB007651 SUPFAM:SSF56808 KO:K02865 GO:GO:0022625
HOGENOM:HOG000207014 ProtClustDB:CLSN2687446 Gene3D:3.30.190.20
Gene3D:3.40.50.790 InterPro:IPR023673 EMBL:AY037253 EMBL:AY077657
EMBL:F19997 IPI:IPI00536065 RefSeq:NP_001078612.1
RefSeq:NP_197636.1 UniGene:At.7367 ProteinModelPortal:P59231
SMR:P59231 STRING:P59231 PRIDE:P59231 EnsemblPlants:AT5G22440.1
EnsemblPlants:AT5G22440.2 GeneID:832305 KEGG:ath:AT5G22440
GeneFarm:211 TAIR:At5g22440 InParanoid:P59231 OMA:GPRNKMP
PhylomeDB:P59231 Genevestigator:P59231 GermOnline:AT5G22440
Uniprot:P59231
Length = 217
Score = 107 (42.7 bits), Expect = 0.00096, P = 0.00096
Identities = 47/197 (23%), Positives = 88/197 (44%)
Query: 137 FTETAEAHFRL-NIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGADLVG 195
FTET E L N DP+ D++ +V LP +K+ +L + EA+ G + +
Sbjct: 28 FTETIELQIGLKNYDPQ-KDKRFSGSVKLPHVPRPKMKICMLGDAQHVEEAEKIGLESMD 86
Query: 196 GDDLIEQIKGGFM------EFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTN-- 247
+ L + K + +F +AS + ++K + ++LGP GL K T+ ++
Sbjct: 87 VEALKKLNKNKKLVKKLAKKFHAFLAS-ESVIK--QIPRLLGP-GLNKAGKFPTLVSHQE 142
Query: 248 -IPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGV 306
+ + E K V+++ K + + G E + N +V + + K + V
Sbjct: 143 SLESKVNE-TKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNV 201
Query: 307 YWKSAYICSSMGPSIRL 323
+ Y+ S+MGP R+
Sbjct: 202 --RCLYLKSTMGPPNRV 216
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.133 0.384 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 337 279 0.00081 115 3 11 22 0.39 34
33 0.41 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 57
No. of states in DFA: 607 (65 KB)
Total size of DFA: 189 KB (2108 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.15u 0.10s 20.25t Elapsed: 00:00:01
Total cpu time: 20.16u 0.10s 20.26t Elapsed: 00:00:01
Start: Mon May 20 19:25:17 2013 End: Mon May 20 19:25:18 2013