BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019646
(337 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LY66|RK1_ARATH 50S ribosomal protein L1, chloroplastic OS=Arabidopsis thaliana
GN=RPL1 PE=1 SV=1
Length = 346
Score = 417 bits (1072), Expect = e-116, Method: Compositional matrix adjust.
Identities = 231/367 (62%), Positives = 259/367 (70%), Gaps = 55/367 (14%)
Query: 1 MATCGTTPSSLMLTYAATPVHPQDLTPSLSLLSFKPSKTAAFSLCTNLSVRGGER-RASK 59
MA C T SSLML YAA QDLTP+ SL SF S+ S L + GG R R
Sbjct: 1 MAACATH-SSLMLAYAAASTRSQDLTPTPSLFSFASSRPNHLSF--PLLLLGGSRDRRCA 57
Query: 60 WLDLYPLRQNKNGLPGHMLAAASAVEADTDLATDDVEDDTQGGTEGATATATATIST-KP 118
+D R + + SAV A+ DL D E+D + TATA + KP
Sbjct: 58 AID----RASNHKF------IVSAVAAEADL---DTEEDLE-------QTATAVLDPPKP 97
Query: 119 KKGKAALPLKRDRMSS------------------------------TKFTETAEAHFRLN 148
KKGKAAL LKRDR S T+F E+ EAHFRLN
Sbjct: 98 KKGKAALVLKRDRTRSKRFLEIQKLRETKKEYDVNTAISLLKQTANTRFVESVEAHFRLN 157
Query: 149 IDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGADLVGGDDLIEQIKGGFM 208
IDPKYNDQQLRATVSLPKGTG++V VAVLAQGEK +EAK+AGAD+VG DDLIEQIKGGFM
Sbjct: 158 IDPKYNDQQLRATVSLPKGTGQTVIVAVLAQGEKVDEAKSAGADIVGSDDLIEQIKGGFM 217
Query: 209 EFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTG 268
EFDKLIASPDMMVKVA LGKILGPRGLMPNPKAGTVT NIPQAIEEFKKGKVE+RADKTG
Sbjct: 218 EFDKLIASPDMMVKVAGLGKILGPRGLMPNPKAGTVTANIPQAIEEFKKGKVEFRADKTG 277
Query: 269 IVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEM 328
IVHIPFGK +F+E+DLLINFLAAVKS+E NKPKGAKGVYWKSA+ICSSMGPSI+LNI+EM
Sbjct: 278 IVHIPFGKVNFTEEDLLINFLAAVKSVETNKPKGAKGVYWKSAHICSSMGPSIKLNIREM 337
Query: 329 LDYKLPS 335
+D+K P+
Sbjct: 338 IDFKPPT 344
>sp|Q9LE95|RK1_SPIOL 50S ribosomal protein L1, chloroplastic OS=Spinacia oleracea
GN=RPL1 PE=1 SV=1
Length = 352
Score = 388 bits (996), Expect = e-107, Method: Compositional matrix adjust.
Identities = 215/366 (58%), Positives = 247/366 (67%), Gaps = 45/366 (12%)
Query: 1 MATCGTTPSSLMLTYAATPVHPQDLTPSLSLLSFKPSKTAAFSLCTNLSVRGGERRASKW 60
MAT P SL L YA++ Q PS FKP + SLC L++ ER KW
Sbjct: 1 MATAA--PPSLSLCYASSSFQYQQ-DPSFQT-HFKPLLLNS-SLC-RLTLNQRERSCLKW 54
Query: 61 LDLYPLRQNKNGLPGHMLAAASAVEADTDLATDDVEDDTQGGTEGATATATATISTKPKK 120
+D +Q+ + +LAA +A D+ + AT TKPKK
Sbjct: 55 VDFTSQKQSPKSVSFRVLAAVAAEAEVADMEE---------EEGESGGVATLPSPTKPKK 105
Query: 121 GKAALPLKRDR------------------------------MSSTKFTETAEAHFRLNID 150
GKAALPLK DR MSSTKF ETAEAHFRLNID
Sbjct: 106 GKAALPLKSDRTRSKRFLEIQKLREIKQEYDLKTALSLMKQMSSTKFVETAEAHFRLNID 165
Query: 151 PKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEF 210
PKYNDQQLRATVSLPKGTGK+VK+AVLAQG+K +EAK AGAD+VGG++LIEQIKGGFM+F
Sbjct: 166 PKYNDQQLRATVSLPKGTGKTVKIAVLAQGDKIDEAKAAGADIVGGEELIEQIKGGFMDF 225
Query: 211 DKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIV 270
DKLIA+ DMM KVASLG+ILGPRGLMP PKAGTVT N+ QA+EEFKKGKVE+R DKTGIV
Sbjct: 226 DKLIATSDMMAKVASLGRILGPRGLMPTPKAGTVTPNVAQAVEEFKKGKVEFRVDKTGIV 285
Query: 271 HIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLD 330
HIPFGK +F E+DLLIN A +KS+E NKP GAKGVYWKSA+I SSMGPSIRLNI+EMLD
Sbjct: 286 HIPFGKLNFEEEDLLINLFATIKSVETNKPTGAKGVYWKSAHISSSMGPSIRLNIREMLD 345
Query: 331 YKLPSN 336
YK PSN
Sbjct: 346 YKPPSN 351
>sp|B0JNQ5|RL1_MICAN 50S ribosomal protein L1 OS=Microcystis aeruginosa (strain
NIES-843) GN=rplA PE=3 SV=1
Length = 237
Score = 279 bits (713), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 132/224 (58%), Positives = 173/224 (77%), Gaps = 1/224 (0%)
Query: 110 ATATISTKPKKGKAALPLKRDRMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTG 169
A A + K + AL L ++ +++ KF ETAEAH RL IDPKY DQQLR TVSLPKGTG
Sbjct: 12 AQAKVENKAYEPLEALTLLKE-LATAKFDETAEAHIRLGIDPKYTDQQLRTTVSLPKGTG 70
Query: 170 KSVKVAVLAQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKI 229
++V+VAV+ +GEK EA NAGAD+VG ++LIE+I G M+F+ LIA+PDMM KVA LG+
Sbjct: 71 RTVRVAVITRGEKVQEANNAGADIVGSEELIEEIAKGMMDFEVLIATPDMMPKVAKLGRQ 130
Query: 230 LGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFL 289
LGPRGLMP+PK GTVTT++ AI EFK GK+E+RAD+TGIVH+ FGKA FS +DLL+N
Sbjct: 131 LGPRGLMPSPKGGTVTTDLTGAIAEFKAGKLEFRADRTGIVHVQFGKASFSAEDLLVNLK 190
Query: 290 AAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLDYKL 333
A ++++ N+P GAKG YW++ Y+ SSMGPSI+++I + D KL
Sbjct: 191 ALQETVDRNRPSGAKGRYWRTVYVSSSMGPSIQVDISALRDLKL 234
>sp|Q8DM27|RL1_THEEB 50S ribosomal protein L1 OS=Thermosynechococcus elongatus (strain
BP-1) GN=rplA PE=3 SV=1
Length = 237
Score = 278 bits (710), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 129/222 (58%), Positives = 176/222 (79%), Gaps = 1/222 (0%)
Query: 112 ATISTKPKKGKAALPLKRDRMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKS 171
A + +P AL L ++ ++ KF E+AEAH RL IDPKY DQQLR TV+LPKGTG++
Sbjct: 13 AKVEDRPYAPLEALQLLKE-TATAKFPESAEAHIRLGIDPKYTDQQLRTTVALPKGTGQT 71
Query: 172 VKVAVLAQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILG 231
++VAV+A+GEK EA AGAD+VG ++LI++I+ G M+FD LIA+PDMM +VA +G+ILG
Sbjct: 72 IRVAVIARGEKVTEASAAGADVVGSEELIDEIQKGRMDFDLLIATPDMMPQVAKVGRILG 131
Query: 232 PRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAA 291
PRGLMP+PKAGTVT ++PQAI+EFK GKVE+RAD++GIVH+ FGKA FS +DLL+N A
Sbjct: 132 PRGLMPSPKAGTVTFDLPQAIQEFKAGKVEFRADRSGIVHVLFGKASFSAEDLLVNLKAL 191
Query: 292 VKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLDYKL 333
+SI+ N+P GAKG YW+S Y+ ++MGPSI+++I + + KL
Sbjct: 192 QESIDRNRPSGAKGRYWRSVYVAATMGPSIQVDINALRELKL 233
>sp|O78413|RK1_GUITH 50S ribosomal protein L1, chloroplastic OS=Guillardia theta GN=rpl1
PE=3 SV=1
Length = 234
Score = 277 bits (708), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 132/217 (60%), Positives = 167/217 (76%), Gaps = 1/217 (0%)
Query: 114 ISTKPKKGKAALPLKRDRMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVK 173
I KP K AL L +D ++ KF E+AEAH L +D KY DQQLR T+ LPKGTGK ++
Sbjct: 15 IENKPYKAIEALNLLKD-TATAKFVESAEAHIALKLDTKYADQQLRTTLVLPKGTGKKIR 73
Query: 174 VAVLAQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPR 233
+AV+A+GEK EA NAGADL G DL++ I G ++FD+LIA+PDMM +A LGK+LGPR
Sbjct: 74 IAVIAEGEKATEAINAGADLAGSTDLVQDIMKGMLDFDRLIATPDMMPLIAKLGKVLGPR 133
Query: 234 GLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVK 293
GLMP+PK+GTVT+++ AIEEFKKGK+EYRADK+GIVHI FGK +FS +DLL+N A +
Sbjct: 134 GLMPSPKSGTVTSDVKSAIEEFKKGKLEYRADKSGIVHISFGKTNFSVNDLLLNLEAVQE 193
Query: 294 SIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLD 330
SI+ N+P G KG YWKS YICS+MGPSI+L+I E D
Sbjct: 194 SIDKNRPAGVKGKYWKSFYICSTMGPSIQLDISEFRD 230
>sp|Q8YLJ7|RL1_NOSS1 50S ribosomal protein L1 OS=Nostoc sp. (strain PCC 7120 / UTEX
2576) GN=rplA PE=3 SV=1
Length = 238
Score = 275 bits (702), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 125/201 (62%), Positives = 164/201 (81%)
Query: 133 SSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGAD 192
++ KF E AEAH RL IDPKY DQQLR TV+LPKGTG+ V+VAV+A+GEK EA NAGAD
Sbjct: 34 ATAKFGEAAEAHIRLGIDPKYTDQQLRTTVALPKGTGQIVRVAVIARGEKVTEASNAGAD 93
Query: 193 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAI 252
+VG ++LI++I+ G M+FDKLIA+PD+M +VA LGK+LGPRGLMP+PK GTVT ++ AI
Sbjct: 94 VVGSEELIDEIQKGRMDFDKLIATPDVMPQVAKLGKMLGPRGLMPSPKGGTVTFDVASAI 153
Query: 253 EEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAY 312
EFK GK+E+RAD+TGIVH+ FGKA FS +DLL+N A ++I+ N+P GAKG YW++ Y
Sbjct: 154 AEFKAGKLEFRADRTGIVHVMFGKASFSPEDLLVNLKALQETIDRNRPSGAKGRYWRTFY 213
Query: 313 ICSSMGPSIRLNIKEMLDYKL 333
+ ++MGPSIR++I + DYKL
Sbjct: 214 VSATMGPSIRVDINALRDYKL 234
>sp|Q3MA18|RL1_ANAVT 50S ribosomal protein L1 OS=Anabaena variabilis (strain ATCC 29413
/ PCC 7937) GN=rplA PE=3 SV=1
Length = 238
Score = 274 bits (701), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 125/201 (62%), Positives = 163/201 (81%)
Query: 133 SSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGAD 192
++ KF E AEAH RL IDPKY DQQLR TV+LPKGTG+ V+VAV+A+GEK EA NAGAD
Sbjct: 34 ATAKFAEAAEAHIRLGIDPKYTDQQLRTTVALPKGTGQIVRVAVIARGEKVTEASNAGAD 93
Query: 193 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAI 252
+ G ++LI++I+ G M+FDKLIA+PD+M +VA LGK+LGPRGLMP+PK GTVT +I AI
Sbjct: 94 VFGSEELIDEIQKGRMDFDKLIATPDVMPQVAKLGKMLGPRGLMPSPKGGTVTFDIASAI 153
Query: 253 EEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAY 312
EFK GK+E+RAD+TGIVH+ FGKA FS +DLL+N A ++I+ N+P GAKG YW++ Y
Sbjct: 154 AEFKAGKLEFRADRTGIVHVMFGKASFSPEDLLVNLKALQETIDRNRPSGAKGRYWRTFY 213
Query: 313 ICSSMGPSIRLNIKEMLDYKL 333
+ ++MGPSIR++I + DYKL
Sbjct: 214 VSATMGPSIRVDINALRDYKL 234
>sp|B0CAD0|RL1_ACAM1 50S ribosomal protein L1 OS=Acaryochloris marina (strain MBIC
11017) GN=rplA PE=3 SV=1
Length = 236
Score = 271 bits (692), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 124/203 (61%), Positives = 162/203 (79%)
Query: 131 RMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAG 190
+ ++ KF E+AEAH RL IDPKY DQQLR TV+LPKGTG+ V++AV+A+GEK EA +AG
Sbjct: 32 KTATAKFPESAEAHIRLGIDPKYTDQQLRTTVALPKGTGQEVRIAVVARGEKVKEATDAG 91
Query: 191 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQ 250
AD+VG ++LI +I+ G M+FD LIA+PDMM +VA +G+ILGPRGLMP+PKAGTVT ++PQ
Sbjct: 92 ADVVGSEELITEIQQGRMDFDLLIATPDMMPQVAKVGRILGPRGLMPSPKAGTVTFDLPQ 151
Query: 251 AIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKS 310
AIEEFK GK+E+RAD+TGIVH+ FGKA FS DLL N A +I+ N+P GAKG YW+S
Sbjct: 152 AIEEFKAGKLEFRADRTGIVHVMFGKAKFSAQDLLENLKALQDTIDRNRPSGAKGRYWRS 211
Query: 311 AYICSSMGPSIRLNIKEMLDYKL 333
Y+ ++MGPSI ++I + D L
Sbjct: 212 LYVSATMGPSIEVDISSLRDLNL 234
>sp|P36236|RL1_SYNY3 50S ribosomal protein L1 OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=rplA PE=3 SV=1
Length = 238
Score = 271 bits (692), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 124/204 (60%), Positives = 161/204 (78%)
Query: 133 SSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGAD 192
++ KF ETAEAH RL IDPKY+DQQ+R TVSLPKGTG++V+VAVLA+GEK EA +AGAD
Sbjct: 35 ATAKFDETAEAHIRLGIDPKYSDQQIRTTVSLPKGTGQTVRVAVLARGEKVKEATDAGAD 94
Query: 193 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAI 252
+ G ++LIE+I+ G M+FD LIA+PDMM K+A LGK LGPRGLMP+PK GTVT ++ A+
Sbjct: 95 IAGSEELIEEIQKGMMDFDVLIATPDMMPKIARLGKQLGPRGLMPSPKGGTVTADLAAAV 154
Query: 253 EEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAY 312
EFK GK+E+RAD+TGIVH+ FGKA FS DDLL N A ++I+ N+P GAKG +W++ +
Sbjct: 155 NEFKAGKLEFRADRTGIVHVMFGKASFSADDLLANLKALQETIDRNRPSGAKGRFWRTVF 214
Query: 313 ICSSMGPSIRLNIKEMLDYKLPSN 336
+ SSMGPSI ++I + D K N
Sbjct: 215 VSSSMGPSIPVDINALRDLKFEDN 238
>sp|Q31QK4|RL1_SYNE7 50S ribosomal protein L1 OS=Synechococcus elongatus (strain PCC
7942) GN=rplA PE=3 SV=1
Length = 237
Score = 269 bits (688), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 127/211 (60%), Positives = 167/211 (79%), Gaps = 1/211 (0%)
Query: 123 AALPLKRDRMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEK 182
AAL L ++ ++ KF E+AEAH RL IDPKY DQQLR TV+LPKGTG++++VAV+A+GEK
Sbjct: 25 AALNLLKE-TATAKFPESAEAHIRLGIDPKYTDQQLRTTVALPKGTGQTIRVAVIARGEK 83
Query: 183 FNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAG 242
EAK AGAD+ G ++LIE+I GF++FD LIA+PD+M +VA LG+ LGPRGLMP+PK G
Sbjct: 84 VAEAKAAGADIAGSEELIEEISKGFLDFDLLIATPDVMPQVAKLGRQLGPRGLMPSPKGG 143
Query: 243 TVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKG 302
TVT ++ QAI EFK GK+E+RAD+TGIVH+ FGKA FS DDLL N A ++I+ N+P G
Sbjct: 144 TVTFDLEQAINEFKAGKLEFRADRTGIVHVLFGKASFSADDLLANLKALQETIDRNRPSG 203
Query: 303 AKGVYWKSAYICSSMGPSIRLNIKEMLDYKL 333
AKG YW+S YI ++MGP+I ++I + D KL
Sbjct: 204 AKGRYWRSVYISATMGPAIEVDINALRDLKL 234
>sp|B7JWT7|RL1_CYAP8 50S ribosomal protein L1 OS=Cyanothece sp. (strain PCC 8801)
GN=rplA PE=3 SV=1
Length = 238
Score = 269 bits (688), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 123/201 (61%), Positives = 160/201 (79%)
Query: 133 SSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGAD 192
++ KF E+AEAH RL IDPKY DQQLR TVSLPKGTG+ V+VAV+A+GEK EA NAGAD
Sbjct: 35 ATAKFNESAEAHIRLGIDPKYTDQQLRTTVSLPKGTGQEVRVAVIARGEKVQEANNAGAD 94
Query: 193 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAI 252
+VG ++LIE+I G M+F+ LIA+PDMM KVA LG++LGPRGLMP+PK GTVT ++ AI
Sbjct: 95 IVGSEELIEEIFKGMMDFEVLIATPDMMPKVAKLGRLLGPRGLMPSPKGGTVTADLTNAI 154
Query: 253 EEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAY 312
EFK GK+E+RAD+TGIVH+ FGKA F+ +DLL N A ++++ N+P GAKG YW+S +
Sbjct: 155 TEFKAGKLEFRADRTGIVHVMFGKASFTPEDLLANLKALQETVDRNRPSGAKGRYWRSVF 214
Query: 313 ICSSMGPSIRLNIKEMLDYKL 333
+ +SMGPSI ++I + D KL
Sbjct: 215 VSASMGPSIAVDINALRDLKL 235
>sp|A6MVP8|RK1_RHDSA 50S ribosomal protein L1, chloroplastic OS=Rhodomonas salina
GN=rpl1 PE=3 SV=1
Length = 234
Score = 269 bits (687), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 137/217 (63%), Positives = 170/217 (78%), Gaps = 1/217 (0%)
Query: 114 ISTKPKKGKAALPLKRDRMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVK 173
+ +P KG AL L ++ +++ KFTETAEAH L ID KY DQQLR T+ LPKGTGK V+
Sbjct: 15 VELRPYKGTEALNLLKE-LATAKFTETAEAHISLKIDTKYADQQLRTTLVLPKGTGKKVR 73
Query: 174 VAVLAQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPR 233
+AV+AQGEK NEA AGADL G +DLI+ I G ++FD+LIA+PDMM +A LGK+LGPR
Sbjct: 74 IAVVAQGEKINEALAAGADLAGAEDLIQNIMKGDLDFDRLIATPDMMPAIAKLGKVLGPR 133
Query: 234 GLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVK 293
GLMP+PK+GTVT +I +AI+EFKKGK+EYRADK+GIVHI FGK DFS +DLL N A +
Sbjct: 134 GLMPSPKSGTVTADIKEAIDEFKKGKLEYRADKSGIVHILFGKTDFSVEDLLANLEAVQE 193
Query: 294 SIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLD 330
SI+ N+P G KG YWKS YICS+MGPSI+L+I E D
Sbjct: 194 SIDKNRPSGVKGRYWKSFYICSTMGPSIQLDISEFRD 230
>sp|A5GWK1|RL1_SYNR3 50S ribosomal protein L1 OS=Synechococcus sp. (strain RCC307)
GN=rplA PE=3 SV=1
Length = 235
Score = 269 bits (687), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 122/198 (61%), Positives = 157/198 (79%)
Query: 133 SSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGAD 192
++ KF ET EAH RL IDPKY DQQLR TV+LPKGTG+S+++AV+ +GEK EAK AGA+
Sbjct: 33 ATAKFDETIEAHVRLGIDPKYTDQQLRTTVALPKGTGRSIRIAVITRGEKVAEAKAAGAE 92
Query: 193 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAI 252
LVG ++L++ I GG M+FD LIA+PDMM KVA LG++LGPRGLMPNPK GTVTT++ AI
Sbjct: 93 LVGDEELVDSIAGGQMDFDLLIATPDMMPKVAKLGRVLGPRGLMPNPKTGTVTTDVTNAI 152
Query: 253 EEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAY 312
EFK GK+E+RAD++GIVH+ FGKA FS DDLL N + ++++ NKP GAKG YWKS Y
Sbjct: 153 NEFKAGKLEFRADRSGIVHVQFGKASFSADDLLENLKSVQETVDRNKPSGAKGRYWKSLY 212
Query: 313 ICSSMGPSIRLNIKEMLD 330
I S+MGPS+ ++ + D
Sbjct: 213 ITSTMGPSVEVDFSALQD 230
>sp|B7KIR7|RL1_CYAP7 50S ribosomal protein L1 OS=Cyanothece sp. (strain PCC 7424)
GN=rplA PE=3 SV=1
Length = 238
Score = 269 bits (687), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 118/201 (58%), Positives = 163/201 (81%)
Query: 133 SSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGAD 192
++ KF ETAE H RL IDPKY DQQLR TV+ PKGTG++V+VAV+A+GEK EA +AGAD
Sbjct: 35 ATAKFDETAEVHVRLGIDPKYTDQQLRTTVTFPKGTGQTVRVAVIARGEKVQEASSAGAD 94
Query: 193 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAI 252
+VG ++LI++I+ G M+F+ LIA+PDMM KVA LG++LGPRGLMP+PK GTVTT++ AI
Sbjct: 95 IVGSEELIDEIQNGMMDFEVLIATPDMMPKVAKLGRLLGPRGLMPSPKGGTVTTDLAAAI 154
Query: 253 EEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAY 312
+EFK GK E+RAD+TGIVH+ FGKA F+ +DLL+N A ++I+ N+P GAKG YW++ +
Sbjct: 155 QEFKAGKQEFRADRTGIVHVMFGKASFTAEDLLVNLKALQETIDRNRPSGAKGRYWRTVF 214
Query: 313 ICSSMGPSIRLNIKEMLDYKL 333
+ +SMGPSI++++ + D K+
Sbjct: 215 VSASMGPSIQVDVNSLRDLKV 235
>sp|Q5N3N8|RL1_SYNP6 50S ribosomal protein L1 OS=Synechococcus sp. (strain ATCC 27144 /
PCC 6301 / SAUG 1402/1) GN=rplA PE=3 SV=1
Length = 237
Score = 268 bits (684), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 126/211 (59%), Positives = 167/211 (79%), Gaps = 1/211 (0%)
Query: 123 AALPLKRDRMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEK 182
AAL L ++ ++ KF E+AEAH RL IDPKY DQQLR TV+LPKGTG++++VAV+A+GEK
Sbjct: 25 AALNLLKE-TATAKFPESAEAHIRLGIDPKYTDQQLRTTVALPKGTGQTIRVAVIARGEK 83
Query: 183 FNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAG 242
EAK AGAD+ G ++LIE+I GF++FD LIA+PD+M +VA LG+ LGPRGLMP+PK G
Sbjct: 84 VAEAKAAGADIAGSEELIEEISKGFLDFDLLIATPDVMPQVAKLGRQLGPRGLMPSPKGG 143
Query: 243 TVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKG 302
TVT ++ QA+ EFK GK+E+RAD+TGIVH+ FGKA FS DDLL N A ++I+ N+P G
Sbjct: 144 TVTFDLEQAVNEFKAGKLEFRADRTGIVHVLFGKASFSADDLLANLKALQETIDRNRPSG 203
Query: 303 AKGVYWKSAYICSSMGPSIRLNIKEMLDYKL 333
AKG YW+S YI ++MGP+I ++I + D KL
Sbjct: 204 AKGRYWRSVYISATMGPAIEVDINALRDPKL 234
>sp|Q7V478|RL1_PROMM 50S ribosomal protein L1 OS=Prochlorococcus marinus (strain MIT
9313) GN=rplA PE=3 SV=1
Length = 235
Score = 267 bits (682), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 124/200 (62%), Positives = 157/200 (78%)
Query: 133 SSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGAD 192
++ KF ET EAH RL IDPKY DQQLR TV+LP+GTG+SV++AV+++GEK EAK AGA+
Sbjct: 33 ATAKFDETIEAHVRLGIDPKYTDQQLRTTVALPQGTGQSVRIAVISRGEKLAEAKTAGAE 92
Query: 193 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAI 252
L G DDL+E I G M+FD LIA+PDMM KVA LG++LGPRGLMPNPKAGTVTT++ AI
Sbjct: 93 LAGDDDLVESIGKGQMDFDLLIATPDMMPKVAKLGRVLGPRGLMPNPKAGTVTTDLAAAI 152
Query: 253 EEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAY 312
+EFK GK+E+RAD+ GIVH+ FGKA FS D LL N ++I+ NKP GAKG YWKS Y
Sbjct: 153 KEFKAGKLEFRADRAGIVHVRFGKASFSADALLENLKTLQETIDRNKPSGAKGRYWKSLY 212
Query: 313 ICSSMGPSIRLNIKEMLDYK 332
I S+MGPS+ +++ + D +
Sbjct: 213 ITSTMGPSVEVDVTALQDLE 232
>sp|A2CDE8|RL1_PROM3 50S ribosomal protein L1 OS=Prochlorococcus marinus (strain MIT
9303) GN=rplA PE=3 SV=2
Length = 235
Score = 266 bits (680), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 124/200 (62%), Positives = 156/200 (78%)
Query: 133 SSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGAD 192
++ KF ET EAH RL IDPKY DQQLR TV+LP+GTG+SV++AV+ +GEK EAK AGA+
Sbjct: 33 ATAKFDETIEAHVRLGIDPKYTDQQLRTTVALPQGTGQSVRIAVITRGEKLAEAKTAGAE 92
Query: 193 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAI 252
L G DDL+E I G M+FD LIA+PDMM KVA LG++LGPRGLMPNPKAGTVTT++ AI
Sbjct: 93 LAGDDDLVESIGKGQMDFDLLIATPDMMPKVAKLGRVLGPRGLMPNPKAGTVTTDLAAAI 152
Query: 253 EEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAY 312
+EFK GK+E+RAD+ GIVH+ FGKA FS D LL N ++I+ NKP GAKG YWKS Y
Sbjct: 153 KEFKAGKLEFRADRAGIVHVRFGKASFSADALLENLKTLQETIDRNKPSGAKGRYWKSLY 212
Query: 313 ICSSMGPSIRLNIKEMLDYK 332
I S+MGPS+ +++ + D +
Sbjct: 213 ITSTMGPSVEVDVTALQDIE 232
>sp|P48125|RK1_CYAPA 50S ribosomal protein L1, cyanelle OS=Cyanophora paradoxa GN=rpl1
PE=3 SV=1
Length = 237
Score = 264 bits (675), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 121/206 (58%), Positives = 161/206 (78%)
Query: 131 RMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAG 190
++S+ KF ET E H RL IDPKYNDQQLRATV+LP GTG++++VAV+ +GEK NEA AG
Sbjct: 31 QISTAKFIETVEVHCRLGIDPKYNDQQLRATVTLPNGTGQTLRVAVITRGEKINEASTAG 90
Query: 191 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQ 250
ADLVG ++LI++I+ G ++FD LIA+PDMM +VA LG++LGPRGLMP+PK GTVT ++ Q
Sbjct: 91 ADLVGAEELIDEIQNGRLDFDCLIATPDMMPQVAKLGRVLGPRGLMPSPKGGTVTFDLAQ 150
Query: 251 AIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKS 310
AI +FK GK+E+R D+TGIVH+ FGKA+FSE+ LL N A ++++ N+P G KG YWKS
Sbjct: 151 AINDFKAGKLEFRNDRTGIVHVLFGKANFSEEALLGNLKAVQEAVDRNRPSGVKGKYWKS 210
Query: 311 AYICSSMGPSIRLNIKEMLDYKLPSN 336
YI S+M PSI ++ + D KL N
Sbjct: 211 IYITSTMSPSIEVDYNLLRDLKLTEN 236
>sp|A5GPD4|RL1_SYNPW 50S ribosomal protein L1 OS=Synechococcus sp. (strain WH7803)
GN=rplA PE=3 SV=1
Length = 235
Score = 263 bits (673), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 123/198 (62%), Positives = 155/198 (78%)
Query: 133 SSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGAD 192
++ KF ET EAH RL IDPKY DQQLR TV+LP GTG++V++AV+ +GEK EAK AGA+
Sbjct: 33 ATAKFDETVEAHARLGIDPKYTDQQLRTTVALPHGTGQTVRIAVITRGEKVAEAKAAGAE 92
Query: 193 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAI 252
L G +DL+E I G M+FD LIA+PDMM KVA LG++LGPRGLMPNPKAGTVTT++ AI
Sbjct: 93 LAGDEDLVETISKGEMDFDLLIATPDMMPKVAKLGRVLGPRGLMPNPKAGTVTTDLAAAI 152
Query: 253 EEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAY 312
EFK GK+E+RAD+TGIVH+ FGKA FSE +LL N ++I+ NKP GAKG YWKS Y
Sbjct: 153 NEFKAGKLEFRADRTGIVHVRFGKASFSEGNLLDNLKTLQETIDRNKPSGAKGRYWKSLY 212
Query: 313 ICSSMGPSIRLNIKEMLD 330
+ S+MGPS+ ++I + D
Sbjct: 213 VTSTMGPSVEVDIAALQD 230
>sp|Q3AGT0|RL1_SYNSC 50S ribosomal protein L1 OS=Synechococcus sp. (strain CC9605)
GN=rplA PE=3 SV=1
Length = 235
Score = 263 bits (673), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 126/209 (60%), Positives = 160/209 (76%), Gaps = 1/209 (0%)
Query: 124 ALPLKRDRMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKF 183
A+ L +D ++ KF ET EAH RL IDPKY DQQLR TV+LP GTG+SV++AV+ +GEK
Sbjct: 25 AIALVKDN-ANAKFDETMEAHVRLGIDPKYTDQQLRTTVALPNGTGQSVRIAVVTRGEKV 83
Query: 184 NEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGT 243
EAK AGA+L G +DL+E I G M+FD LIA+PDMM KVA LG++LGPRGLMPNPKAGT
Sbjct: 84 AEAKAAGAELAGEEDLVESISKGEMDFDLLIATPDMMPKVAKLGRVLGPRGLMPNPKAGT 143
Query: 244 VTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGA 303
VTT++ AI+EFK GK+E+RAD+TGIVH+ FGKA FS D LL N ++I+ NKP GA
Sbjct: 144 VTTDLEAAIKEFKAGKLEFRADRTGIVHVRFGKASFSADALLQNLKTLQETIDRNKPSGA 203
Query: 304 KGVYWKSAYICSSMGPSIRLNIKEMLDYK 332
KG YWKS Y+ S+MGPS+ ++ + D +
Sbjct: 204 KGRYWKSLYVTSTMGPSVEVDFSALQDIE 232
>sp|A2BUI0|RL1_PROM5 50S ribosomal protein L1 OS=Prochlorococcus marinus (strain MIT
9515) GN=rplA PE=3 SV=1
Length = 235
Score = 263 bits (673), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 122/200 (61%), Positives = 156/200 (78%)
Query: 133 SSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGAD 192
++ KF ET EAH RL IDPKY DQQLR TV+LP GTG+S+K+AV+ GE +AK+AGAD
Sbjct: 33 ANAKFDETIEAHIRLGIDPKYTDQQLRTTVALPHGTGQSIKIAVITSGENVAKAKSAGAD 92
Query: 193 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAI 252
L G +DL+E I G M+FD LIA+PDMM KVA LG++LGPRGLMPNPKAGTVT++I AI
Sbjct: 93 LFGEEDLVESINKGNMDFDLLIATPDMMPKVAKLGRVLGPRGLMPNPKAGTVTSDIASAI 152
Query: 253 EEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAY 312
+EFK GK+E+RADK GIVH+ FGKA F+E+ L N +SI+ NKP GAKG YWK+ Y
Sbjct: 153 KEFKAGKLEFRADKAGIVHVRFGKASFTENALFENLKTLQESIDKNKPSGAKGKYWKTFY 212
Query: 313 ICSSMGPSIRLNIKEMLDYK 332
+ S+MGPS++++I + DY+
Sbjct: 213 VTSTMGPSVQVDINALQDYQ 232
>sp|A8G2L0|RL1_PROM2 50S ribosomal protein L1 OS=Prochlorococcus marinus (strain MIT
9215) GN=rplA PE=3 SV=1
Length = 235
Score = 262 bits (670), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 122/200 (61%), Positives = 156/200 (78%)
Query: 133 SSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGAD 192
++ KF ET EAH RL IDPKY DQQLR TV+LP GTG+S+++AV+ GE ++AK+AGAD
Sbjct: 33 ANAKFDETIEAHIRLGIDPKYTDQQLRTTVALPHGTGQSIRIAVITSGENVSKAKSAGAD 92
Query: 193 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAI 252
L G +DL+E I G MEFD LIA+PDMM KVA LG++LGPRGLMPNPKAGTVT +I AI
Sbjct: 93 LFGEEDLVESINKGNMEFDLLIATPDMMPKVAKLGRVLGPRGLMPNPKAGTVTNDIGNAI 152
Query: 253 EEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAY 312
+EFK GK+E+RADK GIVH+ FGKA F+++ L N +SI+ NKP GAKG YWKS Y
Sbjct: 153 KEFKAGKLEFRADKAGIVHVRFGKASFTKEALFENLKTLQESIDKNKPSGAKGKYWKSFY 212
Query: 313 ICSSMGPSIRLNIKEMLDYK 332
+ S+MGPS++++I + DY+
Sbjct: 213 VTSTMGPSVQVDINAVQDYQ 232
>sp|P51338|RK1_PORPU 50S ribosomal protein L1, chloroplastic OS=Porphyra purpurea
GN=rpl1 PE=3 SV=1
Length = 229
Score = 261 bits (668), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 120/197 (60%), Positives = 158/197 (80%)
Query: 133 SSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGAD 192
S+ KF ETAEAH L ++PKY DQQLRATV LPKGTGK VKVAV+A+GEK EA NAGAD
Sbjct: 33 SNAKFKETAEAHISLGLNPKYADQQLRATVILPKGTGKLVKVAVIAKGEKLTEAMNAGAD 92
Query: 193 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAI 252
+ G ++LI++I G ++FDKLIA+PD+M +A LG++LGPRGLMP+PKAGTVT +I ++I
Sbjct: 93 ISGSEELIDEISKGRLDFDKLIATPDIMPLIAKLGRVLGPRGLMPSPKAGTVTLDITKSI 152
Query: 253 EEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAY 312
EFK GKVEYR D+TGI+H+PFGK+ F E+DL++N SI+ NKP G+KG YWK+ +
Sbjct: 153 NEFKGGKVEYRVDRTGIIHVPFGKSSFPEEDLVMNLQTIKDSIDKNKPSGSKGKYWKTFF 212
Query: 313 ICSSMGPSIRLNIKEML 329
+ S+MGPSI+++I +L
Sbjct: 213 LSSTMGPSIQIDITSLL 229
>sp|A2BNZ8|RL1_PROMS 50S ribosomal protein L1 OS=Prochlorococcus marinus (strain AS9601)
GN=rplA PE=3 SV=1
Length = 235
Score = 261 bits (668), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 123/200 (61%), Positives = 154/200 (77%)
Query: 133 SSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGAD 192
++ KF ET EAH RL IDPKY DQQLR TV LP GTG+S+K+AV+ GE ++AK AGAD
Sbjct: 33 ANAKFDETIEAHIRLGIDPKYTDQQLRTTVVLPHGTGQSIKIAVITSGENVSKAKAAGAD 92
Query: 193 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAI 252
L G +DL+E I G MEFD LIA+PDMM KVA LG++LGPRGLMPNPKAGTVT +I AI
Sbjct: 93 LFGEEDLVESINKGNMEFDLLIATPDMMPKVAKLGRVLGPRGLMPNPKAGTVTNDIANAI 152
Query: 253 EEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAY 312
+EFK GK+E+RADK GIVH+ FGKA F+++ L N +SI+ NKP GAKG YWK+ Y
Sbjct: 153 KEFKAGKLEFRADKAGIVHVRFGKASFTKEALFDNLKTLQESIDKNKPSGAKGKYWKTFY 212
Query: 313 ICSSMGPSIRLNIKEMLDYK 332
+ S+MGPS++L+I + DY+
Sbjct: 213 VTSTMGPSVQLDINAVQDYQ 232
>sp|Q7VDY6|RL1_PROMA 50S ribosomal protein L1 OS=Prochlorococcus marinus (strain SARG /
CCMP1375 / SS120) GN=rplA PE=3 SV=1
Length = 234
Score = 261 bits (668), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 123/200 (61%), Positives = 156/200 (78%)
Query: 133 SSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGAD 192
++ KF ET EAH RL IDPKY DQQ+R TVSLPKGTG+ V++AV+A+GEK EA +AGAD
Sbjct: 33 ANAKFDETIEAHIRLGIDPKYTDQQIRTTVSLPKGTGQKVRIAVIAKGEKVAEANSAGAD 92
Query: 193 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAI 252
L G ++LI+ I G M FD LI++PDMM KVA LG++LGPRGLMPNPKAGTVTT++ +I
Sbjct: 93 LAGEEELIDSISKGEMNFDLLISTPDMMPKVAKLGRVLGPRGLMPNPKAGTVTTDLISSI 152
Query: 253 EEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAY 312
+EFK GK+E+RAD+ GIVH+ FGKA FS +DLL N ++I+ NKP GAKG YWKS Y
Sbjct: 153 KEFKAGKLEFRADRAGIVHVRFGKASFSPEDLLENLKVLHEAIDRNKPSGAKGRYWKSLY 212
Query: 313 ICSSMGPSIRLNIKEMLDYK 332
I S+MGPS+ ++I + D K
Sbjct: 213 ITSTMGPSVEIDIAALQDSK 232
>sp|Q7V382|RL1_PROMP 50S ribosomal protein L1 OS=Prochlorococcus marinus subsp. pastoris
(strain CCMP1986 / MED4) GN=rplA PE=3 SV=1
Length = 235
Score = 261 bits (668), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 122/200 (61%), Positives = 155/200 (77%)
Query: 133 SSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGAD 192
++ KF ET EAH RL IDPKY DQQLR TV+LP GTG+S+K+AV+ GE +AK+AGAD
Sbjct: 33 ANAKFDETIEAHIRLGIDPKYTDQQLRTTVALPNGTGQSIKIAVITSGENVAKAKSAGAD 92
Query: 193 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAI 252
L G +DL+E I G M+FD LIA+PDMM KVA LG++LGPRGLMPNPKAGTVT +I AI
Sbjct: 93 LFGEEDLVESINKGNMDFDLLIATPDMMPKVAKLGRVLGPRGLMPNPKAGTVTGDIASAI 152
Query: 253 EEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAY 312
+EFK GK+E+RADK GIVH+ FGKA F+E+ L N +SI+ NKP GAKG YW+S Y
Sbjct: 153 KEFKAGKLEFRADKAGIVHVRFGKASFTENALFENLKTLQESIDKNKPSGAKGKYWRSFY 212
Query: 313 ICSSMGPSIRLNIKEMLDYK 332
+ S+MGPS++++I + DY+
Sbjct: 213 LTSTMGPSVQVDINALQDYQ 232
>sp|A3PAS1|RL1_PROM0 50S ribosomal protein L1 OS=Prochlorococcus marinus (strain MIT
9301) GN=rplA PE=3 SV=1
Length = 235
Score = 261 bits (668), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 122/200 (61%), Positives = 155/200 (77%)
Query: 133 SSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGAD 192
++ KF ET EAH RL IDPKY DQQLR TV+LP GTG+S+K+AV+ GE ++AK AGAD
Sbjct: 33 ANAKFDETIEAHIRLGIDPKYTDQQLRTTVALPHGTGQSIKIAVITSGENVSKAKAAGAD 92
Query: 193 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAI 252
L G +DL+E I G MEFD LIA+PDMM KVA LG++LGPRGLMPNPKAGTVT +I AI
Sbjct: 93 LFGEEDLVESINKGNMEFDLLIATPDMMPKVAKLGRVLGPRGLMPNPKAGTVTNDIANAI 152
Query: 253 EEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAY 312
+EFK GK+E+RADK GIVH+ FGKA F+++ L N +SI+ NKP GAKG YWK+ Y
Sbjct: 153 KEFKAGKLEFRADKAGIVHVRFGKASFTKEALFDNLKTLQESIDKNKPSGAKGKYWKTFY 212
Query: 313 ICSSMGPSIRLNIKEMLDYK 332
+ S+MGPS++++I + DY+
Sbjct: 213 VTSTMGPSVQVDINAVQDYQ 232
>sp|Q0I6K8|RL1_SYNS3 50S ribosomal protein L1 OS=Synechococcus sp. (strain CC9311)
GN=rplA PE=3 SV=1
Length = 235
Score = 261 bits (667), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 121/200 (60%), Positives = 156/200 (78%)
Query: 133 SSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGAD 192
++ KF ET EAH RL IDPKY DQQLR TV+LP+GTG++V++AV+ +GEK EAK AGA+
Sbjct: 33 ATAKFDETMEAHVRLGIDPKYTDQQLRTTVALPQGTGQTVRIAVITRGEKVAEAKAAGAE 92
Query: 193 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAI 252
L G +DL+E I G M FD LIA+PDMM KVA LG++LGPRGLMPNPKAGTVTT++ AI
Sbjct: 93 LSGDEDLVEAISKGEMNFDLLIATPDMMPKVAKLGRVLGPRGLMPNPKAGTVTTDLASAI 152
Query: 253 EEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAY 312
+EFK GK+E+RAD+TGIVH+ FGKA F+ + LL N ++I+ NKP GAKG YWKS Y
Sbjct: 153 QEFKAGKLEFRADRTGIVHVRFGKASFTAEALLENLKTLQETIDRNKPSGAKGRYWKSLY 212
Query: 313 ICSSMGPSIRLNIKEMLDYK 332
+ S+MGPS+ ++I + D +
Sbjct: 213 VTSTMGPSVEVDIALLQDIE 232
>sp|Q46HH0|RL1_PROMT 50S ribosomal protein L1 OS=Prochlorococcus marinus (strain NATL2A)
GN=rplA PE=3 SV=1
Length = 235
Score = 261 bits (666), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 121/200 (60%), Positives = 154/200 (77%)
Query: 133 SSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGAD 192
++ KF ET EAH RL IDPKY DQQLR TV+LP GTG+ +++AV+ +GEK NEA AGAD
Sbjct: 33 ANAKFDETIEAHIRLGIDPKYTDQQLRTTVALPSGTGQKIRIAVVTRGEKVNEATKAGAD 92
Query: 193 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAI 252
L G +DL++ I G M FD LI++PDMM KVA LG++LGPRGLMPNPKAGTVTT++ AI
Sbjct: 93 LAGEEDLVDSINKGEMNFDLLISTPDMMPKVAKLGRVLGPRGLMPNPKAGTVTTDLEGAI 152
Query: 253 EEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAY 312
+EFK GK+E+RADK GIVH+ FGKA FSE+ LL N +IE NKP GAKG +W+S +
Sbjct: 153 KEFKAGKLEFRADKAGIVHVRFGKASFSEEALLENLKTLQTTIEKNKPSGAKGKFWRSFF 212
Query: 313 ICSSMGPSIRLNIKEMLDYK 332
I S+MGPS+ ++I E+ D +
Sbjct: 213 ITSTMGPSVEVDINELQDLQ 232
>sp|A2C033|RL1_PROM1 50S ribosomal protein L1 OS=Prochlorococcus marinus (strain NATL1A)
GN=rplA PE=3 SV=1
Length = 235
Score = 261 bits (666), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 121/200 (60%), Positives = 154/200 (77%)
Query: 133 SSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGAD 192
++ KF ET EAH RL IDPKY DQQLR TV+LP GTG+ +++AV+ +GEK NEA AGAD
Sbjct: 33 ANAKFDETIEAHIRLGIDPKYTDQQLRTTVALPSGTGQKIRIAVVTRGEKVNEATKAGAD 92
Query: 193 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAI 252
L G +DL++ I G M FD LI++PDMM KVA LG++LGPRGLMPNPKAGTVTT++ AI
Sbjct: 93 LAGEEDLVDSINKGEMNFDLLISTPDMMPKVAKLGRVLGPRGLMPNPKAGTVTTDLEGAI 152
Query: 253 EEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAY 312
+EFK GK+E+RADK GIVH+ FGKA FSE+ LL N +IE NKP GAKG +W+S +
Sbjct: 153 KEFKAGKLEFRADKAGIVHVRFGKASFSEEALLENLKTLQTTIEKNKPSGAKGKFWRSFF 212
Query: 313 ICSSMGPSIRLNIKEMLDYK 332
I S+MGPS+ ++I E+ D +
Sbjct: 213 ITSTMGPSVEVDINELQDLQ 232
>sp|Q6B906|RK1_GRATL 50S ribosomal protein L1, chloroplastic OS=Gracilaria
tenuistipitata var. liui GN=rpl1 PE=3 SV=1
Length = 235
Score = 260 bits (665), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 122/203 (60%), Positives = 164/203 (80%), Gaps = 1/203 (0%)
Query: 124 ALPLKRDRMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKF 183
AL L ++ +S+ KF ETAE H L +DPKY DQQLR TV LPKGTGK ++VAV+ Q K
Sbjct: 26 ALNLMKN-LSNVKFIETAEVHIVLGLDPKYADQQLRTTVMLPKGTGKIMRVAVITQNNKT 84
Query: 184 NEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGT 243
+EAK++GAD+VGG+DLI++IK G ++FDKLIA+PDMM+ +A LGKILGP+GLMP+PKAGT
Sbjct: 85 HEAKSSGADIVGGEDLIDEIKKGRLDFDKLIATPDMMMSIAKLGKILGPKGLMPSPKAGT 144
Query: 244 VTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGA 303
VT N+ I+EFK GK+EY+ D++GI+HIPFGK +F+ +DL IN + +SI+ N+P+G+
Sbjct: 145 VTHNLITTIKEFKAGKLEYKIDRSGILHIPFGKLNFNVEDLHINLITLQESIDRNRPQGS 204
Query: 304 KGVYWKSAYICSSMGPSIRLNIK 326
KG YWKS +I S+MGPSI L+I+
Sbjct: 205 KGKYWKSVHINSTMGPSIPLDIQ 227
>sp|Q31CX8|RL1_PROM9 50S ribosomal protein L1 OS=Prochlorococcus marinus (strain MIT
9312) GN=rplA PE=3 SV=1
Length = 235
Score = 260 bits (665), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 121/200 (60%), Positives = 156/200 (78%)
Query: 133 SSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGAD 192
++ KF ET EAH RL IDPKY DQQLR TV+LP GTG+S+K+AV+ GE ++AK+AGAD
Sbjct: 33 ANAKFDETIEAHIRLGIDPKYTDQQLRTTVALPHGTGQSIKIAVITSGENVSKAKSAGAD 92
Query: 193 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAI 252
L G +DL+E I G M+FD LIA+PDMM KVA LG++LGPRGLMPNPKAGTVT +I AI
Sbjct: 93 LFGEEDLVESINKGNMDFDLLIATPDMMPKVAKLGRVLGPRGLMPNPKAGTVTNDIANAI 152
Query: 253 EEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAY 312
+EFK GK+E+RADK GIVH+ FGKA F+++ L N +SI+ NKP G+KG YWKS Y
Sbjct: 153 KEFKAGKLEFRADKAGIVHVRFGKASFTKEALFDNLKTLQESIDKNKPSGSKGKYWKSFY 212
Query: 313 ICSSMGPSIRLNIKEMLDYK 332
+ S+MGPS++++I + DY+
Sbjct: 213 VTSTMGPSVQVDISAVQDYQ 232
>sp|Q1XDE9|RK1_PORYE 50S ribosomal protein L1, chloroplastic OS=Porphyra yezoensis
GN=rpl1 PE=3 SV=1
Length = 229
Score = 260 bits (664), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 118/197 (59%), Positives = 160/197 (81%)
Query: 133 SSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGAD 192
S+ KF ETAEAH L ++PKY DQQLRATV LPKGTGK +KVAV+A+GEK EA +AGAD
Sbjct: 33 SNAKFKETAEAHIALGLNPKYADQQLRATVILPKGTGKLIKVAVIAKGEKLTEAISAGAD 92
Query: 193 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAI 252
+ G ++LI++I G ++FDKLIA+PD+M +A LG++LGPRGLMP+PKAGTVT ++ +A+
Sbjct: 93 VSGSEELIDEILKGRLDFDKLIATPDVMPLIAKLGRVLGPRGLMPSPKAGTVTLDVAKAV 152
Query: 253 EEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAY 312
EFK GKVEYR D+TGI+H+PFGK+ FS++DL++N +SI+ NKP GAKG YWK+ +
Sbjct: 153 NEFKGGKVEYRVDRTGIIHVPFGKSSFSQEDLVLNLQTIKESIDRNKPSGAKGKYWKTFF 212
Query: 313 ICSSMGPSIRLNIKEML 329
+ S+MGPSI+++I +L
Sbjct: 213 LSSTMGPSIQIDITSLL 229
>sp|Q7U3T7|RL1_SYNPX 50S ribosomal protein L1 OS=Synechococcus sp. (strain WH8102)
GN=rplA PE=3 SV=1
Length = 235
Score = 259 bits (662), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 123/209 (58%), Positives = 159/209 (76%), Gaps = 1/209 (0%)
Query: 124 ALPLKRDRMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKF 183
A+ L +D ++ KF ET EAH RL IDPKY DQQLR TV+LP GTG++V++AV+ +GEK
Sbjct: 25 AIALVKDN-ATAKFDETMEAHVRLGIDPKYTDQQLRTTVALPNGTGQTVRIAVVTRGEKV 83
Query: 184 NEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGT 243
EAK AGA+L G +DL+E I G MEFD LIA+PDMM KVA LG++LGPRGLMPNPKAGT
Sbjct: 84 AEAKAAGAELAGDEDLVETIAKGEMEFDLLIATPDMMPKVAKLGRVLGPRGLMPNPKAGT 143
Query: 244 VTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGA 303
VT ++ AI+EFK GK+E+RAD+TGIVH+ FGKA F+ + LL N ++I+ NKP GA
Sbjct: 144 VTIDLAGAIQEFKAGKLEFRADRTGIVHVRFGKASFTAEALLQNLKTLQETIDRNKPSGA 203
Query: 304 KGVYWKSAYICSSMGPSIRLNIKEMLDYK 332
KG YWKS Y+ S+MGPS+ ++ + D +
Sbjct: 204 KGRYWKSLYVTSTMGPSVEVDFSALQDIE 232
>sp|Q7NK78|RL1_GLOVI 50S ribosomal protein L1 OS=Gloeobacter violaceus (strain PCC 7421)
GN=rplA PE=3 SV=1
Length = 238
Score = 259 bits (661), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 118/201 (58%), Positives = 159/201 (79%)
Query: 133 SSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGAD 192
++ KF ETAE H RL I+PKY DQQ+R+TV LP+GTGK++++AVLA+GEK EA+ AGAD
Sbjct: 34 ANAKFDETAETHIRLGINPKYADQQVRSTVVLPRGTGKAIRIAVLAKGEKVREAEKAGAD 93
Query: 193 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAI 252
+ G ++LIE+I+GGFMEFD +IA+PD+M +VA LGK+LGPRGLMP+PK GTVT ++ AI
Sbjct: 94 IAGSEELIERIQGGFMEFDLMIATPDIMPQVARLGKLLGPRGLMPSPKGGTVTMDLVGAI 153
Query: 253 EEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAY 312
EFK GK+E+RAD+TGIVHIPFGK F+ + L+ N + +I+ KP GAKG YW++ +
Sbjct: 154 REFKAGKLEFRADRTGIVHIPFGKVSFTPEALMDNLKSVQDAIDRAKPSGAKGRYWRTFH 213
Query: 313 ICSSMGPSIRLNIKEMLDYKL 333
I S+MGPSI ++I + D KL
Sbjct: 214 IKSTMGPSIEIDINALRDLKL 234
>sp|Q2JM50|RL1_SYNJB 50S ribosomal protein L1 OS=Synechococcus sp. (strain
JA-2-3B'a(2-13)) GN=rplA PE=3 SV=1
Length = 236
Score = 258 bits (659), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 122/214 (57%), Positives = 164/214 (76%), Gaps = 1/214 (0%)
Query: 122 KAALPLKRDRMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGE 181
+AAL L ++ ++ KF E AE H RL IDPKY DQQLR TV LP+GTG+ ++VAV+A+GE
Sbjct: 24 EAALALMKE-TATAKFEEAAEVHIRLGIDPKYADQQLRTTVVLPRGTGQEIRVAVIARGE 82
Query: 182 KFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKA 241
K EA+NAGAD VG +DLIE+I G M+FD LIA+PD+M +VA LG++LGPRGLMP+PK
Sbjct: 83 KVVEAQNAGADRVGYEDLIEEISKGMMDFDLLIATPDVMPQVAKLGRLLGPRGLMPSPKG 142
Query: 242 GTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPK 301
GTVT ++ QAI+EFK GK+EYRAD+TGIVH+ FGK F + LL N A +SI+ N+P
Sbjct: 143 GTVTMDLAQAIKEFKAGKLEYRADRTGIVHLIFGKCKFPVEALLENLKAVQESIDRNRPS 202
Query: 302 GAKGVYWKSAYICSSMGPSIRLNIKEMLDYKLPS 335
GAKG YW++ ++ ++MGPSI ++I + + KL +
Sbjct: 203 GAKGKYWRTLHVSATMGPSIEVDINALRELKLAT 236
>sp|Q2JTQ5|RL1_SYNJA 50S ribosomal protein L1 OS=Synechococcus sp. (strain JA-3-3Ab)
GN=rplA PE=3 SV=1
Length = 236
Score = 258 bits (659), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 119/201 (59%), Positives = 157/201 (78%)
Query: 133 SSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGAD 192
++ KF E AE H RL IDPKY DQQLR TV LP+GTG+ ++VAV+A+GEK EA+NAGAD
Sbjct: 34 ATAKFDEAAEVHIRLGIDPKYADQQLRTTVVLPRGTGQEIRVAVIARGEKVTEAQNAGAD 93
Query: 193 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAI 252
VG +DLIE+I G ++FD LIA+PD+M +VA LG++LGPRGLMP+PK GTVT ++ QAI
Sbjct: 94 RVGFEDLIEEIGKGVIDFDLLIATPDVMPQVAKLGRLLGPRGLMPSPKGGTVTMDLAQAI 153
Query: 253 EEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAY 312
+EFK GK+EYRADKTGIVH+ FGK F + LL N A +SI+ N+P GAKG YW++ +
Sbjct: 154 KEFKAGKLEYRADKTGIVHLIFGKCKFPVEALLENLKAVQESIDRNRPPGAKGKYWRALH 213
Query: 313 ICSSMGPSIRLNIKEMLDYKL 333
+C++MGPSI ++I + + KL
Sbjct: 214 VCATMGPSIEVDINALRELKL 234
>sp|B1XJH1|RL1_SYNP2 50S ribosomal protein L1 OS=Synechococcus sp. (strain ATCC 27264 /
PCC 7002 / PR-6) GN=rplA PE=3 SV=1
Length = 238
Score = 257 bits (656), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 117/198 (59%), Positives = 154/198 (77%)
Query: 133 SSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGAD 192
++ KF ETAEAH RL IDPKY DQQLR TV+ PKGTG+SV+VAV+ GE+ A+ +GAD
Sbjct: 34 ATAKFDETAEAHIRLGIDPKYTDQQLRTTVAFPKGTGQSVRVAVITSGEQVKVAEESGAD 93
Query: 193 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAI 252
LVG ++LIE I+ G M+F+ LIA+PDMM KVA LG+ LGPRGLMP+PK GTVTT++ AI
Sbjct: 94 LVGSEELIEDIQKGMMDFEVLIATPDMMPKVARLGRQLGPRGLMPSPKGGTVTTDVATAI 153
Query: 253 EEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAY 312
FK GK E+RAD+ GIVH+ FGK+ F+ +DLL+N A ++I+ N+P GAKG YW+S Y
Sbjct: 154 AAFKAGKQEFRADRAGIVHVLFGKSSFAAEDLLVNLKALQETIDRNRPSGAKGRYWRSIY 213
Query: 313 ICSSMGPSIRLNIKEMLD 330
+ +SMGPSI+++I + D
Sbjct: 214 VSASMGPSIQVDINALRD 231
>sp|Q119S7|RL1_TRIEI 50S ribosomal protein L1 OS=Trichodesmium erythraeum (strain
IMS101) GN=rplA PE=3 SV=1
Length = 238
Score = 255 bits (652), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 124/220 (56%), Positives = 171/220 (77%), Gaps = 1/220 (0%)
Query: 114 ISTKPKKGKAALPLKRDRMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVK 173
+ +P + K AL L ++ ++ KF E AEAH RL IDPKY DQQLR TV+LPKGTG++++
Sbjct: 16 VEERPYEPKEALQLLKE-TATAKFLEAAEAHVRLGIDPKYTDQQLRTTVALPKGTGQTIR 74
Query: 174 VAVLAQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPR 233
+AV+A+GEK NEA AGADL G ++LIEQI G MEFD+LIA+PD+M +VA LG++LGPR
Sbjct: 75 IAVIAKGEKVNEALAAGADLAGSEELIEQISKGMMEFDRLIATPDVMPQVAKLGRLLGPR 134
Query: 234 GLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVK 293
GLMP+PK GTVT ++ +AI+EFK GK+E+RAD++GIVH+ FGK FS +DLLIN A +
Sbjct: 135 GLMPSPKGGTVTFDLTKAIDEFKAGKLEFRADRSGIVHVMFGKTSFSVEDLLINLKALQE 194
Query: 294 SIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLDYKL 333
I+ N+P GAKG YW++ ++ ++MGPSI +++ + D KL
Sbjct: 195 CIDRNRPSGAKGRYWRTIFVSATMGPSIEIDVSSLQDLKL 234
>sp|A9BDG6|RL1_PROM4 50S ribosomal protein L1 OS=Prochlorococcus marinus (strain MIT
9211) GN=rplA PE=3 SV=1
Length = 234
Score = 254 bits (648), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 118/198 (59%), Positives = 153/198 (77%)
Query: 133 SSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGAD 192
S+ KF ET EAH RL IDPKY DQQ+R TV+LP GTG+++++AV+A+GEK EAK+AGAD
Sbjct: 33 STAKFDETIEAHVRLGIDPKYTDQQIRTTVTLPNGTGQTIRIAVIARGEKVAEAKSAGAD 92
Query: 193 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAI 252
L G ++L++ I G M FD LIA+PDMM KVA LG++LGPRGLMPNPK GTVT ++ AI
Sbjct: 93 LAGEEELVDSISKGEMGFDLLIATPDMMPKVAKLGRVLGPRGLMPNPKTGTVTADLVGAI 152
Query: 253 EEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAY 312
+EFK GK+E+RADK GI+H+ FGKA F+ D LL N ++I+ NKP GAKG +WK+ Y
Sbjct: 153 KEFKAGKLEFRADKAGIIHVRFGKASFNADALLENLKTLQETIDRNKPSGAKGRFWKTLY 212
Query: 313 ICSSMGPSIRLNIKEMLD 330
I S+MGPSI ++I + D
Sbjct: 213 ITSTMGPSIEVDIAALQD 230
>sp|Q85G11|RK1_CYAME 50S ribosomal protein L1, chloroplastic OS=Cyanidioschyzon merolae
GN=rpl1 PE=3 SV=1
Length = 224
Score = 254 bits (648), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 116/197 (58%), Positives = 150/197 (76%), Gaps = 4/197 (2%)
Query: 131 RMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAG 190
++++ KF ETAEAH RLN+DPKY DQQ+RATV LP GTGK++++AV+ + E G
Sbjct: 30 KLATAKFVETAEAHIRLNLDPKYTDQQIRATVVLPHGTGKAIRIAVITKQSSHIE----G 85
Query: 191 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQ 250
ADLVG DDL QI + FD LIA+PDMM +A LGKILGPRGLMP+PK+GTVTTN+ +
Sbjct: 86 ADLVGSDDLCAQIAQSIINFDCLIATPDMMPTLAKLGKILGPRGLMPSPKSGTVTTNVAE 145
Query: 251 AIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKS 310
AI+ F++G++EYR DKTGIVH+ FG+ DF+E L N +A +S+E NKP GA G+YWKS
Sbjct: 146 AIQAFRRGQIEYRTDKTGIVHLAFGRMDFNEQHLYDNLVAIKESVETNKPSGASGLYWKS 205
Query: 311 AYICSSMGPSIRLNIKE 327
I +SM PSIRLNI++
Sbjct: 206 FAIATSMSPSIRLNIQQ 222
>sp|P49544|RK1_ODOSI 50S ribosomal protein L1, chloroplastic OS=Odontella sinensis
GN=rpl1 PE=3 SV=1
Length = 230
Score = 249 bits (637), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 113/197 (57%), Positives = 147/197 (74%)
Query: 133 SSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGAD 192
++ KFTET E H LNIDPKY DQQLR TV+LP G GK++ +AVL F EA+ AGAD
Sbjct: 34 ATAKFTETVELHANLNIDPKYADQQLRTTVTLPHGIGKTINIAVLTNDSNFTEAREAGAD 93
Query: 193 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAI 252
VG DDLIE+I G + FD LIA+PDMM K+A LG++LGP+GLMP+PK+GTV+T + +
Sbjct: 94 RVGSDDLIEEISQGNISFDLLIATPDMMPKLAKLGRVLGPKGLMPSPKSGTVSTTLTATL 153
Query: 253 EEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAY 312
EFKKGK EY+ADK G+VH+ FGK++F+ L+ N A KSIE N+P G KG Y+KS +
Sbjct: 154 SEFKKGKFEYKADKAGVVHVSFGKSNFTHSQLMENLTALYKSIEQNRPSGVKGKYFKSLF 213
Query: 313 ICSSMGPSIRLNIKEML 329
IC++MGPSI+L++ L
Sbjct: 214 ICTTMGPSIQLDLNIFL 230
>sp|A0T0Q6|RK1_THAPS 50S ribosomal protein L1, chloroplastic OS=Thalassiosira pseudonana
GN=rpl1 PE=3 SV=1
Length = 230
Score = 245 bits (626), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 112/202 (55%), Positives = 153/202 (75%), Gaps = 1/202 (0%)
Query: 124 ALPLKRDRMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKF 183
A+ L +D ++ KF E+ E H LNID KY DQQLR TV+LP G GKS+++AVL F
Sbjct: 26 AITLLQD-TATAKFIESVELHANLNIDTKYADQQLRTTVTLPHGIGKSMRIAVLTNEANF 84
Query: 184 NEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGT 243
NEA GAD+VG +LI+ I G + FD L+A+PDMM K+A LG++LGP+GLMP+PK+GT
Sbjct: 85 NEANEGGADIVGSQELIDDISQGNLNFDLLVATPDMMPKLAKLGRVLGPKGLMPSPKSGT 144
Query: 244 VTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGA 303
V+TN+ + + +FKKGK EY+ADKTG+VH+ FGKA+FS+D L+ N + +SIE N+P G
Sbjct: 145 VSTNLTETLSDFKKGKFEYKADKTGVVHVNFGKANFSKDQLMENLTSLYQSIEQNRPSGV 204
Query: 304 KGVYWKSAYICSSMGPSIRLNI 325
KG Y+KS +IC+SMGPSI+L++
Sbjct: 205 KGKYFKSLFICTSMGPSIQLDL 226
>sp|A0T0C1|RK1_PHATC 50S ribosomal protein L1, chloroplastic OS=Phaeodactylum
tricornutum (strain CCAP 1055/1) GN=rpl1 PE=3 SV=1
Length = 230
Score = 242 bits (618), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 110/194 (56%), Positives = 148/194 (76%)
Query: 133 SSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGAD 192
++TKF E+ E H LNIDPKY DQQLR TV+LP G GK V +AVL E F EAK++G D
Sbjct: 34 ATTKFVESVELHANLNIDPKYADQQLRTTVTLPNGIGKQVVIAVLTNEENFEEAKSSGGD 93
Query: 193 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAI 252
+VG D+LI QI G + FD LIA+P+MM K+A LG++LGP+GLMP+PK+GTVT+ + +
Sbjct: 94 IVGNDELIAQITQGQINFDLLIATPNMMPKLAKLGRMLGPKGLMPSPKSGTVTSTLQSTL 153
Query: 253 EEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAY 312
EFKKGK EY+ADKTGIVH+ FGK++F+ + L+ N A +SIE N+P G KG Y+KS
Sbjct: 154 TEFKKGKFEYKADKTGIVHVNFGKSNFTNEQLVENLKALYQSIEQNRPSGVKGKYFKSVS 213
Query: 313 ICSSMGPSIRLNIK 326
IC++MGPS++L+++
Sbjct: 214 ICTTMGPSVKLDLE 227
>sp|Q9TM00|RK1_CYACA 50S ribosomal protein L1, chloroplastic OS=Cyanidium caldarium
GN=rpl1 PE=3 SV=1
Length = 240
Score = 241 bits (615), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 108/193 (55%), Positives = 149/193 (77%)
Query: 136 KFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGADLVG 195
KF+ET E H L+++ KY+DQQLRA+V LPKGTGK K+AV+ + N+ KN G D+VG
Sbjct: 38 KFSETFEVHCCLDLNTKYSDQQLRASVVLPKGTGKRTKIAVITNEAEVNKIKNFGVDIVG 97
Query: 196 GDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEF 255
DL+E I GF+EFD+L+ +PDMM +A +GKILGPRGLMP+PK+G+VT++I AI+EF
Sbjct: 98 SKDLVESIANGFLEFDQLLTTPDMMPVIAKVGKILGPRGLMPSPKSGSVTSDIYNAIQEF 157
Query: 256 KKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICS 315
KKGK+EYR DK+GIVH GK DF+ +DLL N +A KSI+ N+P GAKG YWK+ Y+C+
Sbjct: 158 KKGKLEYRTDKSGIVHSIIGKIDFTAEDLLNNLIAIKKSIDQNRPNGAKGKYWKNMYLCT 217
Query: 316 SMGPSIRLNIKEM 328
+M P+I+++ ++
Sbjct: 218 TMSPAIKIDFNKL 230
>sp|P49208|RK1_PEA 50S ribosomal protein L1, chloroplastic (Fragment) OS=Pisum sativum
GN=RPL1 PE=2 SV=1
Length = 208
Score = 231 bits (590), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 110/123 (89%), Positives = 115/123 (93%)
Query: 133 SSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGAD 192
+ TKF ET EAHFRLNIDPKYNDQQLRATVSLPKGTGK +KVAVL QGE+F+EAKNAGAD
Sbjct: 86 AKTKFVETVEAHFRLNIDPKYNDQQLRATVSLPKGTGKPIKVAVLTQGERFDEAKNAGAD 145
Query: 193 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAI 252
LVGG+DLIEQIKGGFMEFDKLIASPDMM KVASLGKILGPRGLMPNPKAGTVT NIPQAI
Sbjct: 146 LVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKILGPRGLMPNPKAGTVTANIPQAI 205
Query: 253 EEF 255
EF
Sbjct: 206 AEF 208
>sp|Q3AUJ6|RL1_SYNS9 50S ribosomal protein L1 OS=Synechococcus sp. (strain CC9902)
GN=rplA PE=3 SV=1
Length = 235
Score = 230 bits (586), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 121/205 (59%), Positives = 155/205 (75%), Gaps = 1/205 (0%)
Query: 124 ALPLKRDRMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKF 183
A+ L +D ++ KF ET EAH RL IDPKY DQQLR TV+LP GTG++V++AV+ GEK
Sbjct: 25 AIALVKDN-ANAKFDETMEAHVRLGIDPKYTDQQLRTTVALPNGTGQTVRIAVVTSGEKV 83
Query: 184 NEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGT 243
AK AGA+L G +DL+E I G M FD LIA+PDMM KVA LG++LGPRGLMPNPKAGT
Sbjct: 84 AAAKAAGAELAGDEDLVEAISKGEMNFDLLIATPDMMPKVAKLGRVLGPRGLMPNPKAGT 143
Query: 244 VTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGA 303
VTT++ AI++FK GK+E+RAD+TGIVH+ FGKA F+ D LL N ++I+ NKP GA
Sbjct: 144 VTTDLAAAIKDFKAGKLEFRADRTGIVHVRFGKASFTADALLENLKTLQETIDRNKPSGA 203
Query: 304 KGVYWKSAYICSSMGPSIRLNIKEM 328
KG YWKS Y+ S+MGPS+ ++ +
Sbjct: 204 KGRYWKSLYVTSTMGPSVEVDFSAL 228
>sp|B4UDT5|RL1_ANASK 50S ribosomal protein L1 OS=Anaeromyxobacter sp. (strain K) GN=rplA
PE=3 SV=1
Length = 234
Score = 229 bits (585), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 108/196 (55%), Positives = 146/196 (74%)
Query: 133 SSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGAD 192
++ KF ET +A L +DPK+ DQ +R V LP G GK+V++AV A+G+K EA+ AGAD
Sbjct: 34 ATKKFDETVDASINLGVDPKHADQVVRGAVVLPHGMGKTVRLAVFAKGDKAKEAQEAGAD 93
Query: 193 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAI 252
+VG +DL E+I+GGFM+FDKLIA+PDMM V LGKILGPRGLMPNPK GTVT ++ +A+
Sbjct: 94 IVGAEDLAEKIQGGFMDFDKLIATPDMMGVVGRLGKILGPRGLMPNPKVGTVTMDLARAV 153
Query: 253 EEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAY 312
+E K GKVE+R +K GIVH+PFGKA F D L NF A ++ I KP+ AKGVY K+
Sbjct: 154 KEQKAGKVEFRVEKAGIVHVPFGKASFDPDKLKANFSAIMEVIYKAKPQTAKGVYVKNVT 213
Query: 313 ICSSMGPSIRLNIKEM 328
+ ++MGP I++++ E+
Sbjct: 214 LSTTMGPGIKVDLAEL 229
>sp|B8JB73|RL1_ANAD2 50S ribosomal protein L1 OS=Anaeromyxobacter dehalogenans (strain
2CP-1 / ATCC BAA-258) GN=rplA PE=3 SV=1
Length = 234
Score = 229 bits (585), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 108/196 (55%), Positives = 146/196 (74%)
Query: 133 SSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGAD 192
++ KF ET +A L +DPK+ DQ +R V LP G GK+V++AV A+G+K EA+ AGAD
Sbjct: 34 ATKKFDETVDASINLGVDPKHADQVVRGAVVLPHGMGKTVRLAVFAKGDKAKEAQEAGAD 93
Query: 193 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAI 252
+VG +DL E+I+GGFM+FDKLIA+PDMM V LGKILGPRGLMPNPK GTVT ++ +A+
Sbjct: 94 IVGAEDLAEKIQGGFMDFDKLIATPDMMGVVGRLGKILGPRGLMPNPKVGTVTMDLARAV 153
Query: 253 EEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAY 312
+E K GKVE+R +K GIVH+PFGKA F D L NF A ++ I KP+ AKGVY K+
Sbjct: 154 KEQKAGKVEFRVEKAGIVHVPFGKASFDPDKLKANFSAIMEVIYKAKPQTAKGVYVKNVT 213
Query: 313 ICSSMGPSIRLNIKEM 328
+ ++MGP I++++ E+
Sbjct: 214 LSTTMGPGIKVDLAEL 229
>sp|Q2II81|RL1_ANADE 50S ribosomal protein L1 OS=Anaeromyxobacter dehalogenans (strain
2CP-C) GN=rplA PE=3 SV=1
Length = 234
Score = 229 bits (584), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 108/196 (55%), Positives = 146/196 (74%)
Query: 133 SSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGAD 192
++ KF ET +A L +DPK+ DQ +R V LP G GK+V++AV A+G+K EA+ AGAD
Sbjct: 34 ATKKFDETVDASINLGVDPKHADQVVRGAVVLPHGMGKTVRLAVFAKGDKAKEAQEAGAD 93
Query: 193 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAI 252
+VG +DL E+I+GGFM+FDKLIA+PDMM V LGKILGPRGLMPNPK GTVT ++ +A+
Sbjct: 94 IVGAEDLAEKIQGGFMDFDKLIATPDMMGVVGRLGKILGPRGLMPNPKVGTVTMDLARAV 153
Query: 253 EEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAY 312
+E K GKVE+R +K GIVH+PFGKA F + L NF A ++ I KP+ AKGVY K+
Sbjct: 154 KEQKAGKVEFRVEKAGIVHVPFGKASFDPEKLKANFSAIMEVIYKAKPQTAKGVYVKNVT 213
Query: 313 ICSSMGPSIRLNIKEM 328
+ ++MGP I+L++ E+
Sbjct: 214 LSTTMGPGIKLDLAEL 229
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.130 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 125,757,464
Number of Sequences: 539616
Number of extensions: 5296502
Number of successful extensions: 12406
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 853
Number of HSP's successfully gapped in prelim test: 49
Number of HSP's that attempted gapping in prelim test: 11345
Number of HSP's gapped (non-prelim): 909
length of query: 337
length of database: 191,569,459
effective HSP length: 118
effective length of query: 219
effective length of database: 127,894,771
effective search space: 28008954849
effective search space used: 28008954849
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)