Query 019647
Match_columns 337
No_of_seqs 222 out of 1427
Neff 7.8
Searched_HMMs 46136
Date Fri Mar 29 03:25:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019647.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019647hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00176 galactinol synthase 100.0 1.1E-67 2.5E-72 496.0 29.2 314 23-337 20-333 (333)
2 cd02537 GT8_Glycogenin Glycoge 100.0 9.4E-44 2E-48 324.5 22.3 237 26-297 1-240 (240)
3 cd00505 Glyco_transf_8 Members 100.0 4.8E-37 1E-41 281.3 17.9 225 27-271 2-246 (246)
4 PRK15171 lipopolysaccharide 1, 100.0 6E-37 1.3E-41 291.7 13.8 247 27-301 25-293 (334)
5 cd06914 GT8_GNT1 GNT1 is a fun 100.0 8.3E-36 1.8E-40 274.6 18.2 230 26-296 1-277 (278)
6 cd04194 GT8_A4GalT_like A4GalT 100.0 3.3E-35 7.2E-40 269.2 12.1 221 31-271 4-248 (248)
7 cd06431 GT8_LARGE_C LARGE cata 100.0 8.1E-34 1.8E-38 263.7 16.4 243 32-301 7-275 (280)
8 PF01501 Glyco_transf_8: Glyco 100.0 1.1E-34 2.3E-39 263.7 10.1 226 31-272 3-249 (250)
9 cd06429 GT8_like_1 GT8_like_1 100.0 9.8E-34 2.1E-38 259.8 14.9 212 33-295 6-257 (257)
10 COG1442 RfaJ Lipopolysaccharid 100.0 1.8E-33 3.8E-38 264.0 14.7 222 32-273 7-248 (325)
11 PLN02523 galacturonosyltransfe 100.0 5.9E-29 1.3E-33 242.5 15.1 251 23-297 246-548 (559)
12 PLN02718 Probable galacturonos 100.0 5.6E-29 1.2E-33 245.3 12.4 241 35-296 320-591 (603)
13 cd06430 GT8_like_2 GT8_like_2 100.0 2.9E-27 6.2E-32 219.7 16.9 218 29-267 3-257 (304)
14 cd06432 GT8_HUGT1_C_like The C 99.9 1.5E-26 3.3E-31 211.7 13.4 213 33-263 7-239 (248)
15 PLN02659 Probable galacturonos 99.9 2.6E-27 5.7E-32 230.3 7.6 180 101-298 328-523 (534)
16 PLN02867 Probable galacturonos 99.9 2.5E-27 5.3E-32 231.4 6.6 180 101-297 329-524 (535)
17 PLN02769 Probable galacturonos 99.9 1.5E-26 3.2E-31 229.2 11.5 170 101-297 436-619 (629)
18 PLN02870 Probable galacturonos 99.9 5.4E-27 1.2E-31 228.1 5.9 180 101-297 327-521 (533)
19 PLN02742 Probable galacturonos 99.9 1.8E-25 3.9E-30 217.9 13.1 178 101-298 337-525 (534)
20 PLN02829 Probable galacturonos 99.9 5.2E-26 1.1E-30 224.0 7.2 175 101-297 441-628 (639)
21 PLN02910 polygalacturonate 4-a 99.9 2.5E-25 5.3E-30 218.9 6.1 174 101-296 459-645 (657)
22 COG5597 Alpha-N-acetylglucosam 99.7 3.1E-19 6.7E-24 161.8 -3.2 239 35-292 68-353 (368)
23 KOG1950 Glycosyl transferase, 99.3 3.5E-12 7.7E-17 123.5 8.9 233 104-337 113-365 (369)
24 PF11051 Mannosyl_trans3: Mann 98.3 3.5E-06 7.7E-11 78.3 9.0 105 33-140 7-115 (271)
25 PF03407 Nucleotid_trans: Nucl 98.0 5.4E-05 1.2E-09 67.5 10.1 171 66-263 11-201 (212)
26 KOG1879 UDP-glucose:glycoprote 97.5 0.00055 1.2E-08 73.4 9.6 219 31-272 1186-1426(1470)
27 PLN03182 xyloglucan 6-xylosylt 94.5 0.23 4.9E-06 48.3 9.0 88 184-273 242-366 (429)
28 PF05637 Glyco_transf_34: gala 91.8 0.082 1.8E-06 48.3 1.5 78 182-263 140-231 (239)
29 PF07801 DUF1647: Protein of u 90.7 1.5 3.2E-05 36.7 7.8 53 22-77 58-110 (142)
30 KOG1928 Alpha-1,4-N-acetylgluc 90.2 0.25 5.4E-06 47.5 3.1 72 120-227 242-316 (409)
31 PLN03181 glycosyltransferase; 87.8 2.4 5.2E-05 41.5 7.9 57 185-241 244-326 (453)
32 KOG4748 Subunit of Golgi manno 84.4 3.1 6.8E-05 40.0 6.8 144 112-263 172-332 (364)
33 cd02515 Glyco_transf_6 Glycosy 80.1 8.5 0.00019 35.6 7.7 189 31-241 40-247 (271)
34 cd04186 GT_2_like_c Subfamily 76.5 14 0.00031 29.9 7.7 81 39-131 9-90 (166)
35 PRK15384 type III secretion sy 74.9 3 6.5E-05 37.8 3.1 32 115-148 215-246 (336)
36 PF05704 Caps_synth: Capsular 74.4 11 0.00023 35.2 6.9 96 20-137 41-143 (276)
37 cd00761 Glyco_tranf_GTA_type G 74.4 8.7 0.00019 30.1 5.7 84 39-134 9-96 (156)
38 PRK15382 non-LEE encoded effec 74.4 3.2 7E-05 37.7 3.2 31 116-148 211-241 (326)
39 PRK15383 type III secretion sy 74.1 3.3 7.1E-05 37.6 3.1 31 116-148 219-249 (335)
40 cd06439 CESA_like_1 CESA_like_ 73.1 20 0.00043 31.8 8.3 103 22-138 27-133 (251)
41 cd02525 Succinoglycan_BP_ExoA 72.5 15 0.00032 32.4 7.1 88 39-136 12-103 (249)
42 PF04488 Gly_transf_sug: Glyco 70.8 2.3 5E-05 33.1 1.3 87 43-137 5-98 (103)
43 PRK11204 N-glycosyltransferase 69.8 15 0.00032 36.0 7.1 98 40-146 67-168 (420)
44 PF00535 Glycos_transf_2: Glyc 69.6 2.4 5.3E-05 34.4 1.3 86 41-138 12-102 (169)
45 TIGR03469 HonB hopene-associat 67.1 21 0.00046 34.6 7.5 22 116-137 134-156 (384)
46 cd06434 GT2_HAS Hyaluronan syn 66.5 35 0.00076 29.8 8.3 94 39-146 13-110 (235)
47 cd06423 CESA_like CESA_like is 66.3 16 0.00034 29.5 5.6 87 40-135 10-99 (180)
48 KOG1950 Glycosyl transferase, 66.1 3.1 6.7E-05 40.4 1.4 35 103-137 151-185 (369)
49 PF01793 Glyco_transf_15: Glyc 65.5 13 0.00029 35.5 5.5 128 9-138 40-198 (328)
50 cd06427 CESA_like_2 CESA_like_ 64.5 37 0.00081 30.1 8.1 89 39-136 13-106 (241)
51 cd02520 Glucosylceramide_synth 63.2 12 0.00027 32.1 4.6 87 39-131 13-102 (196)
52 PF10111 Glyco_tranf_2_2: Glyc 60.0 19 0.00041 33.3 5.4 24 114-137 87-111 (281)
53 cd06437 CESA_CaSu_A2 Cellulose 59.5 61 0.0013 28.4 8.5 18 114-131 86-103 (232)
54 cd06421 CESA_CelA_like CESA_Ce 59.0 49 0.0011 28.7 7.8 83 40-131 15-100 (234)
55 PF03414 Glyco_transf_6: Glyco 58.9 1.3E+02 0.0028 29.0 10.6 190 32-243 106-314 (337)
56 cd06433 GT_2_WfgS_like WfgS an 57.7 52 0.0011 27.4 7.5 86 39-136 10-97 (202)
57 cd04195 GT2_AmsE_like GT2_AmsE 57.1 40 0.00086 28.6 6.7 82 40-131 13-96 (201)
58 cd04185 GT_2_like_b Subfamily 56.0 40 0.00087 28.7 6.6 91 40-137 10-102 (202)
59 cd02522 GT_2_like_a GT_2_like_ 55.5 43 0.00093 28.8 6.7 83 37-135 9-93 (221)
60 cd02514 GT13_GLCNAC-TI GT13_GL 53.9 65 0.0014 31.0 8.0 100 37-137 10-119 (334)
61 cd02510 pp-GalNAc-T pp-GalNAc- 53.3 29 0.00064 32.1 5.6 87 40-138 12-107 (299)
62 TIGR03472 HpnI hopanoid biosyn 52.6 23 0.0005 34.2 4.9 22 114-135 125-147 (373)
63 PRK10063 putative glycosyl tra 51.4 96 0.0021 28.0 8.5 83 39-132 13-99 (248)
64 cd04192 GT_2_like_e Subfamily 51.2 38 0.00082 29.2 5.7 24 114-137 81-105 (229)
65 COG0463 WcaA Glycosyltransfera 50.6 62 0.0013 26.2 6.7 88 35-132 11-99 (291)
66 PF03071 GNT-I: GNT-I family; 50.4 41 0.00089 33.5 6.2 111 24-138 92-214 (434)
67 PF04765 DUF616: Protein of un 49.7 42 0.00092 31.8 5.9 100 24-138 63-175 (305)
68 PRK14583 hmsR N-glycosyltransf 48.7 48 0.001 32.8 6.6 95 40-146 88-189 (444)
69 cd02511 Beta4Glucosyltransfera 46.3 1.1E+02 0.0023 27.1 7.9 81 40-137 13-94 (229)
70 cd06442 DPM1_like DPM1_like re 46.1 29 0.00063 30.0 4.1 22 116-137 79-101 (224)
71 cd04196 GT_2_like_d Subfamily 44.7 55 0.0012 27.8 5.6 90 40-138 11-103 (214)
72 cd06420 GT2_Chondriotin_Pol_N 43.5 72 0.0016 26.4 6.1 88 39-137 9-102 (182)
73 cd06913 beta3GnTL1_like Beta 1 42.4 1.1E+02 0.0025 26.3 7.4 26 111-136 80-106 (219)
74 cd06438 EpsO_like EpsO protein 40.5 1.6E+02 0.0035 24.6 7.8 90 40-136 10-103 (183)
75 cd04184 GT2_RfbC_Mx_like Myxoc 39.5 90 0.002 26.3 6.2 23 114-136 82-105 (202)
76 cd04179 DPM_DPG-synthase_like 38.3 49 0.0011 27.5 4.2 90 40-138 10-103 (185)
77 PRK11498 bcsA cellulose syntha 37.8 3E+02 0.0064 30.1 10.7 76 59-147 295-374 (852)
78 TIGR03111 glyc2_xrt_Gpos1 puta 36.9 70 0.0015 31.7 5.6 100 23-136 48-153 (439)
79 PF03314 DUF273: Protein of un 35.9 22 0.00048 31.8 1.6 83 114-228 40-127 (222)
80 PRK13915 putative glucosyl-3-p 33.8 1.4E+02 0.0031 28.0 6.9 89 40-137 44-139 (306)
81 PLN02726 dolichyl-phosphate be 33.8 1.2E+02 0.0026 26.8 6.3 23 115-137 93-116 (243)
82 PRK10073 putative glycosyl tra 31.8 1.6E+02 0.0035 27.9 7.0 91 37-137 16-108 (328)
83 KOG0795 Chorismate mutase [Ami 31.4 23 0.0005 31.6 1.0 31 284-314 115-145 (262)
84 PRK10018 putative glycosyl tra 27.8 3.3E+02 0.0071 25.2 8.2 24 114-137 84-108 (279)
85 PRK05454 glucosyltransferase M 27.5 3E+02 0.0065 29.3 8.6 34 114-147 219-255 (691)
86 COG5020 KTR1 Mannosyltransfera 26.6 2.1E+02 0.0046 27.9 6.6 117 20-138 77-224 (399)
87 KOG4472 Glycolipid 2-alpha-man 26.6 2.1E+02 0.0046 27.9 6.6 117 20-138 77-224 (399)
88 COG1216 Predicted glycosyltran 25.8 1.9E+02 0.0042 26.8 6.3 96 35-138 11-108 (305)
89 PF04724 Glyco_transf_17: Glyc 25.4 2.2E+02 0.0048 27.6 6.7 48 12-65 67-114 (356)
90 PF11316 Rhamno_transf: Putati 24.4 1.2E+02 0.0026 27.6 4.4 36 42-77 44-80 (234)
91 cd04187 DPM1_like_bac Bacteria 23.9 1.9E+02 0.0041 23.9 5.4 23 116-138 81-104 (181)
92 cd06436 GlcNAc-1-P_transferase 21.4 3.3E+02 0.0073 22.9 6.6 35 40-75 10-44 (191)
93 PF13704 Glyco_tranf_2_4: Glyc 21.3 2.4E+02 0.0053 20.8 5.1 68 56-131 19-87 (97)
94 COG2943 MdoH Membrane glycosyl 21.0 4.4E+02 0.0095 27.3 7.8 103 24-137 144-263 (736)
No 1
>PLN00176 galactinol synthase
Probab=100.00 E-value=1.1e-67 Score=496.00 Aligned_cols=314 Identities=86% Similarity=1.457 Sum_probs=286.1
Q ss_pred CCCeEEEEEEeeCCCcHHHHHHHHHHHHhhCCCCcEEEEECCCCCHHHHHHHHHcCcEEEEeeeeCCCCchhhhhhhccc
Q 019647 23 LPGRAYVTFLAGNGDYVKGVVGLAKGLRKVKTAYPLVVAVLPDVPEEHRNILESQGCIVREIEPVYPPDNQTQYAMAYYV 102 (337)
Q Consensus 23 ~~~~AyvT~l~~d~~Yl~~a~vll~SL~~~~~~~~lvilv~~~is~~~~~~L~~~~~~i~~V~~i~~~~~~~~~~~~~~~ 102 (337)
.+++||||+|++|++|++|+.||++||+++++.++++|+++++++++.++.|++.|+.+++|+++.+++++.++..+++.
T Consensus 20 ~~~~AyVT~L~~n~~Y~~Ga~vL~~SLr~~~s~~~lVvlVt~dVp~e~r~~L~~~g~~V~~V~~i~~~~~~~~~~~~~~~ 99 (333)
T PLN00176 20 PAKRAYVTFLAGNGDYVKGVVGLAKGLRKVKSAYPLVVAVLPDVPEEHRRILVSQGCIVREIEPVYPPENQTQFAMAYYV 99 (333)
T ss_pred cCceEEEEEEecCcchHHHHHHHHHHHHHhCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEecccCCcccccccccchhh
Confidence 67999999999999999999999999999999999999999999999999999999999999988766655555555566
Q ss_pred ccccceecccccccceeEEEecccccccCchhhhCCCCCceeeeechhccCCCCCCCcccccccccCCCCCCCCcccCCC
Q 019647 103 INYSKLRIWEFVEYSKMIYLDGDIQVFENIDHLFDLPDGYFYAVMDCFCEKTWSKTPQYKIGYCQQCPDRVRWPAEMGEP 182 (337)
Q Consensus 103 ~~y~KL~i~~L~~ydrVLYLDaDilV~~dideLf~~~~~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~~g~~ 182 (337)
.+|+||++|++++||||||||+|+||++|||+||+++.+.+|||.||+|+..|++++++.+++|+.+|++++||..+|.+
T Consensus 100 i~~tKl~iw~l~~ydkvlyLDaD~lv~~nid~Lf~~~~~~~aAV~dc~~~~~~~~~p~~~~~~c~~~~~~~~wp~~~g~~ 179 (333)
T PLN00176 100 INYSKLRIWEFVEYSKMIYLDGDIQVFENIDHLFDLPDGYFYAVMDCFCEKTWSHTPQYKIGYCQQCPDKVTWPAELGPP 179 (333)
T ss_pred hhhhhhhhccccccceEEEecCCEEeecChHHHhcCCCcceEEEecccccccccccccccccccccchhhccchhhccCC
Confidence 78999999999999999999999999999999999987779999999999889999999999999999999999777766
Q ss_pred CCccccceeEEEecCHHHHHHHHHHHhcCCCCCCCChHHHHHHhcCceeeccCcccccchhhhcCCccCCCCCeEEEEee
Q 019647 183 PALYFNAGMFVFEPSISTYHDLLETVKVTPPTTFAEQDFLNMYFKHIYKPIPLVYNLVLAMLWRHPENVELDKVKVVHYC 262 (337)
Q Consensus 183 ~~~yfNsGVmlin~~~~~~~~l~~~~~~~~~~~~~DQdiLN~~f~~~~~~L~~~yN~~~~~~~~~~~~~~~~~~~IiHf~ 262 (337)
+..||||||||++|+.++++++++.++....+.|+|||+||.+|.++|+.||.+||++..+.|++++.+..++++||||+
T Consensus 180 ~~~yFNSGVlvinps~~~~~~ll~~l~~~~~~~f~DQD~LN~~F~~~~~~Lp~~YN~~~~~~~~~~~~~~~~~vkIIHY~ 259 (333)
T PLN00176 180 PPLYFNAGMFVFEPSLSTYEDLLETLKITPPTPFAEQDFLNMFFRDIYKPIPPVYNLVLAMLWRHPENVELDKVKVVHYC 259 (333)
T ss_pred CCCeEEeEEEEEEcCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHcCcEEECCchhcCchhhhhhChhhcccCCcEEEEee
Confidence 67899999999999999999999998766567889999999999999999999999998888888877777899999999
Q ss_pred cCCCCCCCcCCCCCccchhhhHHHHHHHHHHHhhccccccCCCCCCCCCCCCcchhHhhhccccceeeecCCCCC
Q 019647 263 AAGSKPWRFTGEEENMQREDVKMLVKKWWDIYNDESLDYKKPSADGNAGSVNLQPFIDALSDAAAVQFVTAPSAA 337 (337)
Q Consensus 263 g~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (337)
|+..|||+..+.+.++++++...+.++||++|+++.+++++..... .....++||+.|++.+..|.+++|||||
T Consensus 260 ~~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (333)
T PLN00176 260 AAGSKPWRYTGKEENMDREDIKMLVKKWWDIYNDESLDYKNFVPAD-EEEVKLQPFIAALSEAGVVSYVPAPSAA 333 (333)
T ss_pred CCCCCCCCCCCcccCCChHHHHHHHHHHHHHhcccccccccccccc-ccccccchhhhhcccccccccccCCCCC
Confidence 6347999999888899988899999999999999999999877653 5567789999999999999999999997
No 2
>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases.
Probab=100.00 E-value=9.4e-44 Score=324.55 Aligned_cols=237 Identities=43% Similarity=0.792 Sum_probs=194.9
Q ss_pred eEEEEEEeeCCCcHHHHHHHHHHHHhhCCCCcEEEEECCCCCHHHHHHHHHcCcEEEEeeeeCCCCchhhhhhhcccccc
Q 019647 26 RAYVTFLAGNGDYVKGVVGLAKGLRKVKTAYPLVVAVLPDVPEEHRNILESQGCIVREIEPVYPPDNQTQYAMAYYVINY 105 (337)
Q Consensus 26 ~AyvT~l~~d~~Yl~~a~vll~SL~~~~~~~~lvilv~~~is~~~~~~L~~~~~~i~~V~~i~~~~~~~~~~~~~~~~~y 105 (337)
.||||++ +|++|++++.|+++||++++++++++++++++++++.++.|++.+.+++.++.+..+.........++..+|
T Consensus 1 ~ay~t~~-~~~~Y~~~a~vl~~SL~~~~~~~~~~vl~~~~is~~~~~~L~~~~~~~~~v~~i~~~~~~~~~~~~~~~~~~ 79 (240)
T cd02537 1 EAYVTLL-TNDDYLPGALVLGYSLRKVGSSYDLVVLVTPGVSEESREALEEVGWIVREVEPIDPPDSANLLKRPRFKDTY 79 (240)
T ss_pred CEEEEEe-cChhHHHHHHHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHHcCCEEEecCccCCcchhhhccchHHHHHh
Confidence 5999966 588999999999999999999999999999899999999999999888888877654322111223456789
Q ss_pred cceecccccccceeEEEecccccccCchhhhCCCCCceeeeechhccCCCCCCCcccccccccCCCCCCCCcccCCCCCc
Q 019647 106 SKLRIWEFVEYSKMIYLDGDIQVFENIDHLFDLPDGYFYAVMDCFCEKTWSKTPQYKIGYCQQCPDRVRWPAEMGEPPAL 185 (337)
Q Consensus 106 ~KL~i~~L~~ydrVLYLDaDilV~~dideLf~~~~~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~~g~~~~~ 185 (337)
+||++|++.+||||||||+|+||++||++||++ +..++|+.|.. + ..
T Consensus 80 ~kl~~~~l~~~drvlylD~D~~v~~~i~~Lf~~-~~~~~a~~d~~------------------------~--------~~ 126 (240)
T cd02537 80 TKLRLWNLTEYDKVVFLDADTLVLRNIDELFDL-PGEFAAAPDCG------------------------W--------PD 126 (240)
T ss_pred HHHHhccccccceEEEEeCCeeEccCHHHHhCC-CCceeeecccC------------------------c--------cc
Confidence 999999999999999999999999999999999 44588876521 0 26
Q ss_pred cccceeEEEecCHHHHHHHHHHHhcCCCCCCCChHHHHHHhcCc--eeeccCcccccchhhhcCCc-cCCCCCeEEEEee
Q 019647 186 YFNAGMFVFEPSISTYHDLLETVKVTPPTTFAEQDFLNMYFKHI--YKPIPLVYNLVLAMLWRHPE-NVELDKVKVVHYC 262 (337)
Q Consensus 186 yfNsGVmlin~~~~~~~~l~~~~~~~~~~~~~DQdiLN~~f~~~--~~~L~~~yN~~~~~~~~~~~-~~~~~~~~IiHf~ 262 (337)
|||||||+++++...++++++.+.+...+.++||++||.+|.++ |..||.+||++....+..++ .+...+++||||+
T Consensus 127 ~fNsGv~l~~~~~~~~~~~~~~~~~~~~~~~~DQdiLN~~~~~~~~~~~l~~~yN~~~~~~~~~~~~~~~~~~~~iiHf~ 206 (240)
T cd02537 127 LFNSGVFVLKPSEETFNDLLDALQDTPSFDGGDQGLLNSYFSDRGIWKRLPFTYNALKPLRYLHPEALWFGDEIKVVHFI 206 (240)
T ss_pred cccceEEEEcCCHHHHHHHHHHHhccCCCCCCCHHHHHHHHcCCCCEeECCcceeeehhhhccCchhhcccCCcEEEEEe
Confidence 89999999999999999999998876557789999999999999 99999999998765443332 2345789999999
Q ss_pred cCCCCCCCcCCCCCccchhhhHHHHHHHHHHHhhc
Q 019647 263 AAGSKPWRFTGEEENMQREDVKMLVKKWWDIYNDE 297 (337)
Q Consensus 263 g~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~~~~~~ 297 (337)
| ..|||+......+..+++.......||+.|.++
T Consensus 207 g-~~KPW~~~~~~~~~~~~~~~~~~~~w~~~~~~~ 240 (240)
T cd02537 207 G-GDKPWSWWRDPETKEKDDYNELHQWWWDIYDEL 240 (240)
T ss_pred C-CCCCCCCCcCCCcccccchHHHHHHHHHHHhhC
Confidence 9 799999876554433445678999999999764
No 3
>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.
Probab=100.00 E-value=4.8e-37 Score=281.33 Aligned_cols=225 Identities=25% Similarity=0.416 Sum_probs=160.8
Q ss_pred EEEEEEeeCCCcHHHHHHHHHHHHhhCCC-CcEEEEECCCCCHHHHHHHHHcC----cEEEEeeeeCCCCchh-hh-hhh
Q 019647 27 AYVTFLAGNGDYVKGVVGLAKGLRKVKTA-YPLVVAVLPDVPEEHRNILESQG----CIVREIEPVYPPDNQT-QY-AMA 99 (337)
Q Consensus 27 AyvT~l~~d~~Yl~~a~vll~SL~~~~~~-~~lvilv~~~is~~~~~~L~~~~----~~i~~V~~i~~~~~~~-~~-~~~ 99 (337)
++++ +++|++|++++.|+++||+++++. +.++ +++++++++.++.|+... ..+ ++.+++.++... .. ...
T Consensus 2 ~i~~-~a~d~~y~~~~~v~i~Sl~~~~~~~~~~~-il~~~is~~~~~~L~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~~ 78 (246)
T cd00505 2 AIVI-VATGDEYLRGAIVLMKSVLRHRTKPLRFH-VLTNPLSDTFKAALDNLRKLYNFNY-ELIPVDILDSVDSEHLKRP 78 (246)
T ss_pred eEEE-EecCcchhHHHHHHHHHHHHhCCCCeEEE-EEEccccHHHHHHHHHHHhccCceE-EEEeccccCcchhhhhcCc
Confidence 5666 567889999999999999998774 3444 456889999999987642 221 222332222111 11 123
Q ss_pred cccccccceecccccc-cceeEEEecccccccCchhhhCCC--CCceeeeechhccCCCCCCCcccccccccCCCCCCCC
Q 019647 100 YYVINYSKLRIWEFVE-YSKMIYLDGDIQVFENIDHLFDLP--DGYFYAVMDCFCEKTWSKTPQYKIGYCQQCPDRVRWP 176 (337)
Q Consensus 100 ~~~~~y~KL~i~~L~~-ydrVLYLDaDilV~~dideLf~~~--~~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p 176 (337)
++..+|+||+++++++ ++||||||+|+||++||++||+++ +..+|||+|+...... ..++ ...++
T Consensus 79 ~~~~~y~RL~i~~llp~~~kvlYLD~D~iv~~di~~L~~~~l~~~~~aav~d~~~~~~~---~~~~--------~~~~~- 146 (246)
T cd00505 79 IKIVTLTKLHLPNLVPDYDKILYVDADILVLTDIDELWDTPLGGQELAAAPDPGDRREG---KYYR--------QKRSH- 146 (246)
T ss_pred cccceeHHHHHHHHhhccCeEEEEcCCeeeccCHHHHhhccCCCCeEEEccCchhhhcc---chhh--------cccCC-
Confidence 4678999999999876 999999999999999999999986 5679999886431110 0000 01111
Q ss_pred cccCCCCCccccceeEEEecCHHHHHHHHHHHhc-----CCCCCCCChHHHHHHhcCc---eeeccCcccccchhhhcCC
Q 019647 177 AEMGEPPALYFNAGMFVFEPSISTYHDLLETVKV-----TPPTTFAEQDFLNMYFKHI---YKPIPLVYNLVLAMLWRHP 248 (337)
Q Consensus 177 ~~~g~~~~~yfNsGVmlin~~~~~~~~l~~~~~~-----~~~~~~~DQdiLN~~f~~~---~~~L~~~yN~~~~~~~~~~ 248 (337)
.....||||||||+|+++++++++++...+ ..++.++|||+||.+|.++ +..||++||++....++..
T Consensus 147 ----~~~~~yfNsGVmlinl~~~r~~~~~~~~~~~~~~~~~~~~~~DQd~LN~~~~~~~~~i~~L~~~wN~~~~~~~~~~ 222 (246)
T cd00505 147 ----LAGPDYFNSGVFVVNLSKERRNQLLKVALEKWLQSLSSLSGGDQDLLNTFFKQVPFIVKSLPCIWNVRLTGCYRSL 222 (246)
T ss_pred ----CCCCCceeeeeEEEechHHHHHHHHHHHHHHHHhhcccCccCCcHHHHHHHhcCCCeEEECCCeeeEEecCccccc
Confidence 123579999999999999988777654321 2347789999999999998 9999999999876433221
Q ss_pred cc--CCCCCeEEEEeecCCCCCCCc
Q 019647 249 EN--VELDKVKVVHYCAAGSKPWRF 271 (337)
Q Consensus 249 ~~--~~~~~~~IiHf~g~~~KPW~~ 271 (337)
.. ....+++||||+| ..|||+.
T Consensus 223 ~~~~~~~~~~~iiHy~g-~~KPW~~ 246 (246)
T cd00505 223 NCFKAFVKNAKVIHFNG-PTKPWNK 246 (246)
T ss_pred cchhhhcCCCEEEEeCC-CCCCCCC
Confidence 11 1356999999999 7999973
No 4
>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional
Probab=100.00 E-value=6e-37 Score=291.68 Aligned_cols=247 Identities=17% Similarity=0.236 Sum_probs=171.5
Q ss_pred EEEEEEeeCCCcHHHHHHHHHHHHhhCCCCc--EEEEECCCCCHHHHHHHHHc----CcEEEEeeeeCCCCchhhhh--h
Q 019647 27 AYVTFLAGNGDYVKGVVGLAKGLRKVKTAYP--LVVAVLPDVPEEHRNILESQ----GCIVREIEPVYPPDNQTQYA--M 98 (337)
Q Consensus 27 AyvT~l~~d~~Yl~~a~vll~SL~~~~~~~~--lvilv~~~is~~~~~~L~~~----~~~i~~V~~i~~~~~~~~~~--~ 98 (337)
..-.++++|++|+++++|++.||..++++.+ ++ ++++++|+++++.|++. +..+ .+..++.. ....+. .
T Consensus 25 ~i~Iv~~~D~ny~~~~~vsi~Sil~nn~~~~~~f~-Il~~~is~e~~~~l~~l~~~~~~~i-~~~~id~~-~~~~~~~~~ 101 (334)
T PRK15171 25 SLDIAYGIDKNFLFGCGVSIASVLLNNPDKSLVFH-VFTDYISDADKQRFSALAKQYNTRI-NIYLINCE-RLKSLPSTK 101 (334)
T ss_pred ceeEEEECcHhhHHHHHHHHHHHHHhCCCCCEEEE-EEeCCCCHHHHHHHHHHHHhcCCeE-EEEEeCHH-HHhCCcccC
Confidence 3444566799999999999999999887644 55 45689999998887654 3333 23333321 111111 1
Q ss_pred hcccccccceeccccc--ccceeEEEecccccccCchhhhCCC--CCceeeeechhccCCCCCCCcccccccccCCCCCC
Q 019647 99 AYYVINYSKLRIWEFV--EYSKMIYLDGDIQVFENIDHLFDLP--DGYFYAVMDCFCEKTWSKTPQYKIGYCQQCPDRVR 174 (337)
Q Consensus 99 ~~~~~~y~KL~i~~L~--~ydrVLYLDaDilV~~dideLf~~~--~~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~ 174 (337)
.++.++|+||++++++ ++|||||||+|+||++||++||+++ +..+|||.+......|.. . ..+++
T Consensus 102 ~~s~atY~Rl~ip~llp~~~dkvLYLD~Diiv~~dl~~L~~~dl~~~~~aav~~d~~~~~~~~-------~----~~~l~ 170 (334)
T PRK15171 102 NWTYATYFRFIIADYFIDKTDKVLYLDADIACKGSIKELIDLDFAENEIAAVVAEGDAEWWSK-------R----AQSLQ 170 (334)
T ss_pred cCCHHHHHHHHHHHhhhhhcCEEEEeeCCEEecCCHHHHHhccCCCCeEEEEEeccchhHHHH-------H----HHhcC
Confidence 2456899999999985 5999999999999999999999996 366888743211000000 0 00111
Q ss_pred CCcccCCCCCccccceeEEEecCHHHHHHH----HHHHhcC---CCCCCCChHHHHHHhcCceeeccCcccccchhhhcC
Q 019647 175 WPAEMGEPPALYFNAGMFVFEPSISTYHDL----LETVKVT---PPTTFAEQDFLNMYFKHIYKPIPLVYNLVLAMLWRH 247 (337)
Q Consensus 175 ~p~~~g~~~~~yfNsGVmlin~~~~~~~~l----~~~~~~~---~~~~~~DQdiLN~~f~~~~~~L~~~yN~~~~~~~~~ 247 (337)
.|. . ...||||||||||+++|+.+++ ++.+.+. ..+.++|||+||.+|.++|..||.+||++.+..+..
T Consensus 171 ~~~-~---~~~YFNsGVlliNl~~wRe~~i~~k~~~~l~~~~~~~~~~~~DQDiLN~~~~~~~~~L~~~wN~~~~~~~~~ 246 (334)
T PRK15171 171 TPG-L---ASGYFNSGFLLINIPAWAQENISAKAIEMLADPEIVSRITHLDQDVLNILLAGKVKFIDAKYNTQFSLNYEL 246 (334)
T ss_pred Ccc-c---cccceecceEEEcHHHHHHhhHHHHHHHHHhccccccceeecChhHHHHHHcCCeEECCHhhCCccchhHHH
Confidence 110 1 2369999999999999876544 4445432 246789999999999999999999999986543221
Q ss_pred Cc---cCCCCCeEEEEeecCCCCCCCcCCCCCccchhhhHHHHHHHHHHHhhccccc
Q 019647 248 PE---NVELDKVKVVHYCAAGSKPWRFTGEEENMQREDVKMLVKKWWDIYNDESLDY 301 (337)
Q Consensus 248 ~~---~~~~~~~~IiHf~g~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~~~~~~~~~~ 301 (337)
.+ .....+++||||+| +.|||+... ..++.+.||+|+++++.+-
T Consensus 247 ~~~~~~~~~~~p~IIHy~G-~~KPW~~~~---------~~~~~~~f~~~~~~spw~~ 293 (334)
T PRK15171 247 KDSVINPVNDETVFIHYIG-PTKPWHSWA---------DYPVSQYFLKAKEASPWKN 293 (334)
T ss_pred HhcccccccCCCEEEEECC-CCCCCCCCC---------CCchHHHHHHHHhcCCCCC
Confidence 11 11246899999999 899998654 1467899999999887653
No 5
>cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family. N-acetylglucosaminyltransferase is a fungal enzyme that catalyzes the addition of N-acetyl-D-glucosamine to mannotetraose side chains by an alpha 1-2 linkage during the synthesis of mannan. The N-acetyl-D-glucosamine moiety in mannan plays a role in the attachment of mannan to asparagine residues in proteins. The mannotetraose and its N-acetyl-D-glucosamine derivative side chains of mannan are the principle immunochemical determinants on the cell surface. N-acetylglucosaminyltransferase is a member of glycosyltransferase family 8, which are, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed, retaining glycosyltransferases.
Probab=100.00 E-value=8.3e-36 Score=274.60 Aligned_cols=230 Identities=26% Similarity=0.415 Sum_probs=171.1
Q ss_pred eEEEEEEeeCCCcHHHHHHHHHHHHhhCCCCcEEEEECCCCCHHHHHH-------HHHcCcEEEEeeeeCCCCchhhhhh
Q 019647 26 RAYVTFLAGNGDYVKGVVGLAKGLRKVKTAYPLVVAVLPDVPEEHRNI-------LESQGCIVREIEPVYPPDNQTQYAM 98 (337)
Q Consensus 26 ~AyvT~l~~d~~Yl~~a~vll~SL~~~~~~~~lvilv~~~is~~~~~~-------L~~~~~~i~~V~~i~~~~~~~~~~~ 98 (337)
+||||++ +++.|++||+++.+||+++++.+++|++++++++....+. +...++.+..|..+..+. ..
T Consensus 1 fAYvtl~-Tn~~YL~gAlvL~~sLr~~gs~~dlVvLvt~~~~~~~~~~~~~~~~~l~~~~~~v~~v~~~~~~~-----~~ 74 (278)
T cd06914 1 YAYVNYA-TNADYLCNALILFEQLRRLGSKAKLVLLVPETLLDRNLDDFVRRDLLLARDKVIVKLIPVIIASG-----GD 74 (278)
T ss_pred CeEEEEe-cChhHHHHHHHHHHHHHHhCCCCCEEEEECCCCChhhhhhHHHHHHHhhccCcEEEEcCcccCCC-----CC
Confidence 5999976 5899999999999999999999999999999988654332 223355544444333222 11
Q ss_pred hcccccccceecccccccceeEEEecccccccCchhhhCCC-CCceeeeechhccCCCCCCCcccccccccCCCCCCCCc
Q 019647 99 AYYVINYSKLRIWEFVEYSKMIYLDGDIQVFENIDHLFDLP-DGYFYAVMDCFCEKTWSKTPQYKIGYCQQCPDRVRWPA 177 (337)
Q Consensus 99 ~~~~~~y~KL~i~~L~~ydrVLYLDaDilV~~dideLf~~~-~~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p~ 177 (337)
..+..+|+||.+|++++||||||||||+||+++||+||+++ ...+||+. .
T Consensus 75 ~~~~~~~tKl~~~~l~~y~kvlyLDaD~l~~~~ideLf~~~~~~~~Aap~-------------------------~---- 125 (278)
T cd06914 75 AYWAKSLTKLRAFNQTEYDRIIYFDSDSIIRHPMDELFFLPNYIKFAAPR-------------------------A---- 125 (278)
T ss_pred ccHHHHHHHHHhccccceeeEEEecCChhhhcChHHHhcCCcccceeeec-------------------------C----
Confidence 23345699999999999999999999999999999999997 33344431 0
Q ss_pred ccCCCCCccccceeEEEecCHHHHHHHHHHHhcCC--CCCCCChHHHHHHhcCc-------eeeccCc-ccccchhhhcC
Q 019647 178 EMGEPPALYFNAGMFVFEPSISTYHDLLETVKVTP--PTTFAEQDFLNMYFKHI-------YKPIPLV-YNLVLAMLWRH 247 (337)
Q Consensus 178 ~~g~~~~~yfNsGVmlin~~~~~~~~l~~~~~~~~--~~~~~DQdiLN~~f~~~-------~~~L~~~-yN~~~~~~~~~ 247 (337)
..|||||||||+|+.++|+++++.+.... +..+.|||+||.+|.++ +..||.+ ||+..+...+.
T Consensus 126 ------~~~FNSGvmvi~ps~~~~~~l~~~~~~~~~~~~~~~DQdiLN~~~~~~~~~~~~~~~~Lp~~~y~llt~~~r~~ 199 (278)
T cd06914 126 ------YWKFASHLMVIKPSKEAFKELMTEILPAYLNKKNEYDMDLINEEFYNSKQLFKPSVLVLPHRQYGLLTGEFREK 199 (278)
T ss_pred ------cceecceeEEEeCCHHHHHHHHHHHHHhcccCCCCCChHHHHHHHhCCccccCcceEEcCccccccCChhhccc
Confidence 13899999999999999999999876532 23678999999999999 9999996 99988632110
Q ss_pred ------------CccCC----CCCeEEEEeecCC-CCCCCcCCCCCc---------c---chhhhHHHHHHHHHHHhh
Q 019647 248 ------------PENVE----LDKVKVVHYCAAG-SKPWRFTGEEEN---------M---QREDVKMLVKKWWDIYND 296 (337)
Q Consensus 248 ------------~~~~~----~~~~~IiHf~g~~-~KPW~~~~~~~~---------~---~~~~~~~~~~~Ww~~~~~ 296 (337)
.+.|+ ..++++|||+.++ +|||.....+.. . ..++.+..+++|+..|++
T Consensus 200 ~~~~~l~~~~~~~~~w~~~~~~~~~k~vHFSd~Pl~KPW~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~iW~~~y~~ 277 (278)
T cd06914 200 LHKSFLSNAQHLYEKWDPDDVFKESKVIHFSDSPLPKPWNYNNLEDIYCIEKIYCKMVKPRLEDDCRACDLWNSLYAD 277 (278)
T ss_pred CHHHhhccccccccccCHHHHHhhCeEEEecCCCCCCCcCCcCHHHHHHhCCccccCCCCCccCcchHHHHHHHHhhc
Confidence 11122 3689999999842 699998753210 0 112346778999998875
No 6
>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune sys
Probab=100.00 E-value=3.3e-35 Score=269.24 Aligned_cols=221 Identities=24% Similarity=0.366 Sum_probs=159.4
Q ss_pred EEeeCCCcHHHHHHHHHHHHhhCCC--CcEEEEECCCCCHHHHHHHHHc----CcEEEEeeeeCCCCchhh--hhhhccc
Q 019647 31 FLAGNGDYVKGVVGLAKGLRKVKTA--YPLVVAVLPDVPEEHRNILESQ----GCIVREIEPVYPPDNQTQ--YAMAYYV 102 (337)
Q Consensus 31 ~l~~d~~Yl~~a~vll~SL~~~~~~--~~lvilv~~~is~~~~~~L~~~----~~~i~~V~~i~~~~~~~~--~~~~~~~ 102 (337)
++++|++|+.+++|++.||+++++. +++++ ++++++++.++.|++. +..+. +..++.+..... ....++.
T Consensus 4 ~~~~d~~y~~~~~~~l~Sl~~~~~~~~~~~~i-l~~~is~~~~~~L~~~~~~~~~~i~-~~~i~~~~~~~~~~~~~~~~~ 81 (248)
T cd04194 4 VFAIDDNYAPYLAVTIKSILANNSKRDYDFYI-LNDDISEENKKKLKELLKKYNSSIE-FIKIDNDDFKFFPATTDHISY 81 (248)
T ss_pred EEEecHhhHHHHHHHHHHHHhcCCCCceEEEE-EeCCCCHHHHHHHHHHHHhcCCeEE-EEEcCHHHHhcCCcccccccH
Confidence 3567999999999999999999874 45554 4678999999999876 33332 233332111000 1123456
Q ss_pred ccccceecccccc-cceeEEEecccccccCchhhhCCC--CCceeeeechhccCCCCCCCcccccccccCCCCCCCCccc
Q 019647 103 INYSKLRIWEFVE-YSKMIYLDGDIQVFENIDHLFDLP--DGYFYAVMDCFCEKTWSKTPQYKIGYCQQCPDRVRWPAEM 179 (337)
Q Consensus 103 ~~y~KL~i~~L~~-ydrVLYLDaDilV~~dideLf~~~--~~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~~ 179 (337)
.+|+||+++++.+ ++||||||+|+||++||++||+++ +..+||+.|+.......+ . . . ..
T Consensus 82 ~~y~rl~l~~ll~~~~rvlylD~D~lv~~di~~L~~~~~~~~~~aa~~d~~~~~~~~~----~-~-------~-----~~ 144 (248)
T cd04194 82 ATYYRLLIPDLLPDYDKVLYLDADIIVLGDLSELFDIDLGDNLLAAVRDPFIEQEKKR----K-R-------R-----LG 144 (248)
T ss_pred HHHHHHHHHHHhcccCEEEEEeCCEEecCCHHHHhcCCcCCCEEEEEecccHHHHHHH----H-h-------h-----cC
Confidence 7899999999875 999999999999999999999985 567899988653211000 0 0 0 01
Q ss_pred CCCCCccccceeEEEecCHHHHH----HHHHHHhcCC-CCCCCChHHHHHHhcCceeeccCcccccchhhhcCCc-----
Q 019647 180 GEPPALYFNAGMFVFEPSISTYH----DLLETVKVTP-PTTFAEQDFLNMYFKHIYKPIPLVYNLVLAMLWRHPE----- 249 (337)
Q Consensus 180 g~~~~~yfNsGVmlin~~~~~~~----~l~~~~~~~~-~~~~~DQdiLN~~f~~~~~~L~~~yN~~~~~~~~~~~----- 249 (337)
+.....||||||||+|+++++.+ ++++.+++.. .+.++||++||.+|.++|..||.+||++.........
T Consensus 145 ~~~~~~yfNsGv~l~nl~~~r~~~~~~~~~~~~~~~~~~~~~~DQd~LN~~~~~~~~~L~~~~N~~~~~~~~~~~~~~~~ 224 (248)
T cd04194 145 GYDDGSYFNSGVLLINLKKWREENITEKLLELIKEYGGRLIYPDQDILNAVLKDKILYLPPRYNFQTGFYYLLKKKSKEE 224 (248)
T ss_pred CCcccceeeecchheeHHHHHHhhhHHHHHHHHHhCCCceeeCChHHHHHHHhCCeEEcCcccccchhHhHHhhccchhH
Confidence 12346899999999999987654 5555565543 3678999999999999999999999999875432211
Q ss_pred ---cCCCCCeEEEEeecCCCCCCCc
Q 019647 250 ---NVELDKVKVVHYCAAGSKPWRF 271 (337)
Q Consensus 250 ---~~~~~~~~IiHf~g~~~KPW~~ 271 (337)
....++++||||+| ..|||+.
T Consensus 225 ~~~~~~~~~~~iiHf~g-~~KPW~~ 248 (248)
T cd04194 225 QELEEARKNPVIIHYTG-SDKPWNK 248 (248)
T ss_pred HHHHHHhcCCEEEEeCC-CCCCCCC
Confidence 12367899999999 7999973
No 7
>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis. The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil
Probab=100.00 E-value=8.1e-34 Score=263.73 Aligned_cols=243 Identities=18% Similarity=0.230 Sum_probs=159.3
Q ss_pred EeeCCCcHHHHHHHHHHHHhhCC-CCcEEEEECCCCCHHHHHHHHHcC-cEEEEeeeeCCCCchhhh---hh-hcccc-c
Q 019647 32 LAGNGDYVKGVVGLAKGLRKVKT-AYPLVVAVLPDVPEEHRNILESQG-CIVREIEPVYPPDNQTQY---AM-AYYVI-N 104 (337)
Q Consensus 32 l~~d~~Yl~~a~vll~SL~~~~~-~~~lvilv~~~is~~~~~~L~~~~-~~i~~V~~i~~~~~~~~~---~~-~~~~~-~ 104 (337)
+++ .+|++++.|+++||..++. .+.++ +++++++++.++.|.+.- ..-.+|.++...+....+ .. .++.. +
T Consensus 7 ~~~-~~y~~~~~~~i~Sil~n~~~~~~fh-ii~d~~s~~~~~~l~~~~~~~~~~i~f~~i~~~~~~~~~~~~~~~s~~y~ 84 (280)
T cd06431 7 CAG-YNASRDVVTLVKSVLFYRRNPLHFH-LITDEIARRILATLFQTWMVPAVEVSFYNAEELKSRVSWIPNKHYSGIYG 84 (280)
T ss_pred Ecc-CCcHHHHHHHHHHHHHcCCCCEEEE-EEECCcCHHHHHHHHHhccccCcEEEEEEhHHhhhhhccCcccchhhHHH
Confidence 445 8999999999999998863 24455 467899999988886531 111133333332111111 11 12222 5
Q ss_pred ccceeccccc--ccceeEEEecccccccCchhhhCC--C--CC-ceeeeechhccCCCCCCCcccccccccCCCCCCCCc
Q 019647 105 YSKLRIWEFV--EYSKMIYLDGDIQVFENIDHLFDL--P--DG-YFYAVMDCFCEKTWSKTPQYKIGYCQQCPDRVRWPA 177 (337)
Q Consensus 105 y~KL~i~~L~--~ydrVLYLDaDilV~~dideLf~~--~--~~-~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p~ 177 (337)
|.||++++++ ++|||||||||+||++||++||++ + +. .+|++.+. .. +. ..... .....|+
T Consensus 85 y~RL~ip~llp~~~dkvLYLD~Diiv~~di~eL~~~~~~~~~~~~~a~v~~~-~~--~~------~~~~~--~~~~~~~- 152 (280)
T cd06431 85 LMKLVLTEALPSDLEKVIVLDTDITFATDIAELWKIFHKFTGQQVLGLVENQ-SD--WY------LGNLW--KNHRPWP- 152 (280)
T ss_pred HHHHHHHHhchhhcCEEEEEcCCEEEcCCHHHHHHHhhhcCCCcEEEEeccc-hh--hh------hhhhh--hccCCCc-
Confidence 6899999986 499999999999999999999987 2 33 34444432 10 00 00000 0001111
Q ss_pred ccCCCCCccccceeEEEecCHHHHHHHHHHH----hc----CCCCCCCChHHHHHHhcCc---eeeccCcccccchhhhc
Q 019647 178 EMGEPPALYFNAGMFVFEPSISTYHDLLETV----KV----TPPTTFAEQDFLNMYFKHI---YKPIPLVYNLVLAMLWR 246 (337)
Q Consensus 178 ~~g~~~~~yfNsGVmlin~~~~~~~~l~~~~----~~----~~~~~~~DQdiLN~~f~~~---~~~L~~~yN~~~~~~~~ 246 (337)
.. ..||||||||||+++|+.+++.+.+ ++ ...+.++|||+||.+|.++ +..||.+||++.+....
T Consensus 153 ~~----~~yFNsGVmlinL~~wR~~~~~~~~~~~~~~~~~~~~~~~~~DQDiLN~v~~~~~~~~~~L~~~wN~~~~~~~~ 228 (280)
T cd06431 153 AL----GRGFNTGVILLDLDKLRKMKWESMWRLTAERELMSMLSTSLADQDIFNAVIKQNPFLVYQLPCAWNVQLSDHTR 228 (280)
T ss_pred cc----ccceeeeeeeeeHHHHHhhCHHHHHHHHHHHHHhhcCCCCcCcHHHHHHHHcCCcceeEECCCccccccCccch
Confidence 11 2599999999999998866554433 22 2346789999999999999 88999999998653221
Q ss_pred CCc-cCCCCCeEEEEeecCCCCCCCcCCCCCccchhhhHHHHHHHHHHHhhccccc
Q 019647 247 HPE-NVELDKVKVVHYCAAGSKPWRFTGEEENMQREDVKMLVKKWWDIYNDESLDY 301 (337)
Q Consensus 247 ~~~-~~~~~~~~IiHf~g~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~~~~~~~~~~ 301 (337)
..+ ......|+||||+| +.|||..... ..++++.|-+|.+.+...+
T Consensus 229 ~~~~~~~~~~p~IIHf~g-~~KPW~~~~~--------~~~~~~~~~~~~~~~~~~l 275 (280)
T cd06431 229 SEQCYRDVSDLKVIHWNS-PKKLRVKNKH--------VEFFRNLYLTFLEYDGNLL 275 (280)
T ss_pred HhHhhcCcCCCEEEEeCC-CCCCCCcCCC--------ChHHHHHHHHHHhcCchhh
Confidence 111 11256899999999 8999997642 2589999999987664444
No 8
>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....
Probab=100.00 E-value=1.1e-34 Score=263.67 Aligned_cols=226 Identities=29% Similarity=0.468 Sum_probs=151.4
Q ss_pred EEeeCCCcHHHHHHHHHHHHhhCCC-CcE-EEEECCCCCHHHHHHHHHcCcEEEEeeeeCCCCch--------hhhhhhc
Q 019647 31 FLAGNGDYVKGVVGLAKGLRKVKTA-YPL-VVAVLPDVPEEHRNILESQGCIVREIEPVYPPDNQ--------TQYAMAY 100 (337)
Q Consensus 31 ~l~~d~~Yl~~a~vll~SL~~~~~~-~~l-vilv~~~is~~~~~~L~~~~~~i~~V~~i~~~~~~--------~~~~~~~ 100 (337)
++++|.+|+.+++|+++||++++++ ..+ +++++++++++.++.|++.+..+..+..+...... ......+
T Consensus 3 ~~~~d~~y~~~~~v~i~Sl~~~~~~~~~~~i~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (250)
T PF01501_consen 3 VLACDDNYLEGAAVLIKSLLKNNPDPSNLHIYIITDDISEEDFEKLRALAAEVIEIEPIEFPDISMLEEFQFNSPSKRHF 82 (250)
T ss_dssp EEECSGGGHHHHHHHHHHHHHTTTT-SSEEEEEEESSS-HHHHHHHHHHSCCCCTTECEEETSGGHHH--TTS-HCCTCG
T ss_pred EEEeCHHHHHHHHHHHHHHHHhccccccceEEEecCCCCHHHHHHHhhhcccccceeeeccchHHhhhhhhhcccccccc
Confidence 4567999999999999999999875 444 44578899999999998876654322222211111 0111234
Q ss_pred ccccccceecccc-cccceeEEEecccccccCchhhhCCC--CCceeeeechhccCC-CCCCCcccccccccCCCCCCCC
Q 019647 101 YVINYSKLRIWEF-VEYSKMIYLDGDIQVFENIDHLFDLP--DGYFYAVMDCFCEKT-WSKTPQYKIGYCQQCPDRVRWP 176 (337)
Q Consensus 101 ~~~~y~KL~i~~L-~~ydrVLYLDaDilV~~dideLf~~~--~~~iaAv~d~~~~~~-~~~~~~~~~~~~~~~p~~~~~p 176 (337)
+..+|.||+++++ .+||||||||+||||++||++||+++ +..+||+.+...... +.... ..
T Consensus 83 ~~~~~~rl~i~~ll~~~drilyLD~D~lv~~dl~~lf~~~~~~~~~~a~~~~~~~~~~~~~~~---------------~~ 147 (250)
T PF01501_consen 83 SPATFARLFIPDLLPDYDRILYLDADTLVLGDLDELFDLDLQGKYLAAVEDESFDNFPNKRFP---------------FS 147 (250)
T ss_dssp GGGGGGGGGHHHHSTTSSEEEEE-TTEEESS-SHHHHC---TTSSEEEEE----HHHHTSTTS---------------SE
T ss_pred cHHHHHHhhhHHHHhhcCeEEEEcCCeeeecChhhhhcccchhhhccccccchhhhhhhcccc---------------hh
Confidence 5678999999998 79999999999999999999999974 557888877211110 00000 00
Q ss_pred cccCCCCCccccceeEEEecCHHHHHHHHHHH----hcC-CCCCCCChHHHHHHhcCceeeccCcccccchhh-hc-CCc
Q 019647 177 AEMGEPPALYFNAGMFVFEPSISTYHDLLETV----KVT-PPTTFAEQDFLNMYFKHIYKPIPLVYNLVLAML-WR-HPE 249 (337)
Q Consensus 177 ~~~g~~~~~yfNsGVmlin~~~~~~~~l~~~~----~~~-~~~~~~DQdiLN~~f~~~~~~L~~~yN~~~~~~-~~-~~~ 249 (337)
.........+||||||+++++.++++.+.+.+ +.. ....++||++||.+|.+++..||.+||++.... +. ..-
T Consensus 148 ~~~~~~~~~~fNsGv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DQ~~ln~~~~~~~~~L~~~~N~~~~~~~~~~~~~ 227 (250)
T PF01501_consen 148 ERKQPGNKPYFNSGVMLFNPSKWRKENILQKLIEWLEQNGMKLGFPDQDILNIVFYGNIKPLPCRYNCQPSWYNQSDDYF 227 (250)
T ss_dssp EECESTTTTSEEEEEEEEEHHHHHHHHHHHHHHHHHHHTTTT-SSCHHHHHHHHHTTGEEEEEGGGSEEHHHHHHTHHHH
T ss_pred hcccCcccccccCcEEEEeechhhhhhhhhhhhhhhhhcccccCcCchHHHhhhccceeEEECchhccccccccccchhh
Confidence 01112246899999999999998877666554 332 246789999999999999999999999998654 11 000
Q ss_pred cCCCCCeEEEEeecCCCCCCCcC
Q 019647 250 NVELDKVKVVHYCAAGSKPWRFT 272 (337)
Q Consensus 250 ~~~~~~~~IiHf~g~~~KPW~~~ 272 (337)
....++++||||+| ..|||...
T Consensus 228 ~~~~~~~~iiHy~g-~~KPW~~~ 249 (250)
T PF01501_consen 228 NPILEDAKIIHYSG-PPKPWKST 249 (250)
T ss_dssp HHHGCC-SEEE--S-SS-TTSTT
T ss_pred HhhcCCeEEEEeCC-CCcCCCCC
Confidence 11357999999999 89999864
No 9
>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=100.00 E-value=9.8e-34 Score=259.78 Aligned_cols=212 Identities=14% Similarity=0.147 Sum_probs=148.3
Q ss_pred eeCCCcHHHHHHHHHHHHhhCCC-CcEE-EEECCCCCHHHHHHHHHc----CcEEEEeeeeCCCCchhh-----------
Q 019647 33 AGNGDYVKGVVGLAKGLRKVKTA-YPLV-VAVLPDVPEEHRNILESQ----GCIVREIEPVYPPDNQTQ----------- 95 (337)
Q Consensus 33 ~~d~~Yl~~a~vll~SL~~~~~~-~~lv-ilv~~~is~~~~~~L~~~----~~~i~~V~~i~~~~~~~~----------- 95 (337)
++| +|+. ++|++.|+..++++ .+++ .+++++++.+.++.+... +..+ .+..++.......
T Consensus 6 ~~D-n~l~-~~v~i~S~l~nn~~~~~~~fhvvtd~~s~~~~~~~~~~~~~~~~~i-~~~~i~~~~~~~~~~~~~~~~~~~ 82 (257)
T cd06429 6 FSD-NRLA-AAVVINSSISNNKDPSNLVFHIVTDNQNYGAMRSWFDLNPLKIATV-KVLNFDDFKLLGKVKVDSLMQLES 82 (257)
T ss_pred Eec-chhH-HHHHHHHHHHhCCCCCceEEEEecCccCHHHHHHHHHhcCCCCceE-EEEEeCcHHhhcccccchhhhhhc
Confidence 357 9995 66666676666644 5542 356899998888877654 2232 2333321100000
Q ss_pred --------hhh--hcccccccceeccccc-ccceeEEEecccccccCchhhhCCC--CCceeeeechhccCCCCCCCccc
Q 019647 96 --------YAM--AYYVINYSKLRIWEFV-EYSKMIYLDGDIQVFENIDHLFDLP--DGYFYAVMDCFCEKTWSKTPQYK 162 (337)
Q Consensus 96 --------~~~--~~~~~~y~KL~i~~L~-~ydrVLYLDaDilV~~dideLf~~~--~~~iaAv~d~~~~~~~~~~~~~~ 162 (337)
..+ .++..+|+||++|++. +++||||||+|+||++||++||+++ ++.+|||+
T Consensus 83 ~~~~~~~~~~~~~~~s~~~y~Rl~ip~llp~~~kvlYLD~Dviv~~dl~eL~~~dl~~~~~aav~--------------- 147 (257)
T cd06429 83 EADTSNLKQRKPEYISLLNFARFYLPELFPKLEKVIYLDDDVVVQKDLTELWNTDLGGGVAGAVE--------------- 147 (257)
T ss_pred cccccccccCCccccCHHHHHHHHHHHHhhhhCeEEEEeCCEEEeCCHHHHhhCCCCCCEEEEEh---------------
Confidence 001 2356789999999975 6899999999999999999999985 45566652
Q ss_pred ccccccCCCCCCCCcccCCCCCccccceeEEEecCHHHHHHH----HHHHhcCC-C----CCCCChHHHHHHhcCceeec
Q 019647 163 IGYCQQCPDRVRWPAEMGEPPALYFNAGMFVFEPSISTYHDL----LETVKVTP-P----TTFAEQDFLNMYFKHIYKPI 233 (337)
Q Consensus 163 ~~~~~~~p~~~~~p~~~g~~~~~yfNsGVmlin~~~~~~~~l----~~~~~~~~-~----~~~~DQdiLN~~f~~~~~~L 233 (337)
.||||||||+|+++|+.+++ +++++... . ...+||++||.+|.+++..|
T Consensus 148 ----------------------dyfNsGV~linl~~wr~~~i~~~~~~~~~~~~~~~~~~~~~~dqd~ln~~~~~~~~~L 205 (257)
T cd06429 148 ----------------------TSWNPGVNVVNLTEWRRQNVTETYEKWMELNQEEEVTLWKLITLPPGLIVFYGLTSPL 205 (257)
T ss_pred ----------------------hhcccceEEEeHHHHHhccHHHHHHHHHHHhhhcccchhhcCCccHHHHHccCeeEEC
Confidence 27999999999999876544 44443321 1 34579999999999999999
Q ss_pred cCcccccchhhhcCC-ccCCCCCeEEEEeecCCCCCCCcCCCCCccchhhhHHHHHHHHHHHh
Q 019647 234 PLVYNLVLAMLWRHP-ENVELDKVKVVHYCAAGSKPWRFTGEEENMQREDVKMLVKKWWDIYN 295 (337)
Q Consensus 234 ~~~yN~~~~~~~~~~-~~~~~~~~~IiHf~g~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~~~~ 295 (337)
|++||++. ..+... ......+++||||+| +.|||+..+ ..+++++||+|+.
T Consensus 206 ~~~wN~~~-l~~~~~~~~~~~~~~~IIHy~G-~~KPW~~~~---------~~~~~~~w~~yl~ 257 (257)
T cd06429 206 DPSWHVRG-LGYNYGIRPQDIKAAAVLHFNG-NMKPWLRTA---------IPSYKELWEKYLS 257 (257)
T ss_pred ChHHcccC-CcccccccccccCCcEEEEECC-CCCCcCCCC---------CChHHHHHHHHhC
Confidence 99999973 222211 011246899999999 899999765 2478999999963
No 10
>COG1442 RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=1.8e-33 Score=263.96 Aligned_cols=222 Identities=22% Similarity=0.338 Sum_probs=164.6
Q ss_pred EeeCCCcHHHHHHHHHHHHhhCC--CCcEEEEECCCCCHHHHHHHHHc----CcEEEEeeeeCCCCchhhhh---hhccc
Q 019647 32 LAGNGDYVKGVVGLAKGLRKVKT--AYPLVVAVLPDVPEEHRNILESQ----GCIVREIEPVYPPDNQTQYA---MAYYV 102 (337)
Q Consensus 32 l~~d~~Yl~~a~vll~SL~~~~~--~~~lvilv~~~is~~~~~~L~~~----~~~i~~V~~i~~~~~~~~~~---~~~~~ 102 (337)
++.|.+|+.+++|+++||..|+. .+.++|+ .+++++|+.++|++. +..+ .+..++.... ..+. ..++.
T Consensus 7 ~a~D~nY~~~~gvsI~SiL~~n~~~~~~fhil-~~~i~~e~~~~l~~~~~~f~~~i-~~~~id~~~~-~~~~~~~~~~s~ 83 (325)
T COG1442 7 FAFDKNYLIPAGVSIYSLLEHNRKIFYKFHIL-VDGLNEEDKKKLNETAEPFKSFI-VLEVIDIEPF-LDYPPFTKRFSK 83 (325)
T ss_pred EEcccccchhHHHHHHHHHHhCccccEEEEEE-ecCCCHHHHHHHHHHHHhhccce-eeEEEechhh-hcccccccchHH
Confidence 45699999999999999999998 6778865 589999999888763 3322 2333332211 1111 24556
Q ss_pred ccccceeccccc-ccceeEEEecccccccCchhhhCCC--CCceeeeechhccCCCCCCCcccccccccCCCCCCCCccc
Q 019647 103 INYSKLRIWEFV-EYSKMIYLDGDIQVFENIDHLFDLP--DGYFYAVMDCFCEKTWSKTPQYKIGYCQQCPDRVRWPAEM 179 (337)
Q Consensus 103 ~~y~KL~i~~L~-~ydrVLYLDaDilV~~dideLf~~~--~~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~~ 179 (337)
.+|.|++++++. ++||+||||+|+||+++|++||+++ +..+|||.|+........ ..+ ...
T Consensus 84 ~v~~R~fiadlf~~~dK~lylD~Dvi~~g~l~~lf~~~~~~~~~aaV~D~~~~~~~~~------------~~~----~~~ 147 (325)
T COG1442 84 MVLVRYFLADLFPQYDKMLYLDVDVIFCGDLSELFFIDLEEYYLAAVRDVFSHYMKEG------------ALR----LEK 147 (325)
T ss_pred HHHHHHHHHHhccccCeEEEEecCEEEcCcHHHHHhcCCCcceEEEEeehhhhhhhhh------------hhH----hhh
Confidence 899999999985 7899999999999999999999985 678999999643110000 000 011
Q ss_pred CCCCCccccceeEEEecCHHHHHHH----HHHHhcC-CCCCCCChHHHHHHhcCceeeccCcccccchhhhcCCc---cC
Q 019647 180 GEPPALYFNAGMFVFEPSISTYHDL----LETVKVT-PPTTFAEQDFLNMYFKHIYKPIPLVYNLVLAMLWRHPE---NV 251 (337)
Q Consensus 180 g~~~~~yfNsGVmlin~~~~~~~~l----~~~~~~~-~~~~~~DQdiLN~~f~~~~~~L~~~yN~~~~~~~~~~~---~~ 251 (337)
+.....|||||||++|+.+|+.+++ ++.++.. +.+.++|||+||.+|.++|..||.+||++......... ..
T Consensus 148 ~~~~~~yFNaG~llinl~~W~~~~i~~k~i~~~~~~~~~~~~~DQdiLN~i~~~~~~~L~~~YN~~~~~~~~~~~~~~~~ 227 (325)
T COG1442 148 GDLEGSYFNAGVLLINLKLWREENIFEKLIELLKDKENDLLYPDQDILNMIFEDRVLELPIRYNAIPYIDSQLKDKYIYP 227 (325)
T ss_pred cccccccCccceeeehHHHHHHhhhHHHHHHHHhccccccCCccccHHHHHHHhhhhccCcccceeehhhhccchhhhcc
Confidence 1224689999999999999876555 4555443 35788999999999999999999999999876543322 23
Q ss_pred CCCCeEEEEeecCCCCCCCcCC
Q 019647 252 ELDKVKVVHYCAAGSKPWRFTG 273 (337)
Q Consensus 252 ~~~~~~IiHf~g~~~KPW~~~~ 273 (337)
....+.|+||+| ..|||+..+
T Consensus 228 ~~~~~~iiHy~g-~~KPW~~~~ 248 (325)
T COG1442 228 FGDDPVILHYAG-PTKPWHSDS 248 (325)
T ss_pred CCCCceEEEecC-CCCCCcCcc
Confidence 467899999999 789999876
No 11
>PLN02523 galacturonosyltransferase
Probab=99.96 E-value=5.9e-29 Score=242.46 Aligned_cols=251 Identities=16% Similarity=0.277 Sum_probs=162.5
Q ss_pred CCCeEEEEEEeeCCCcHHHHHHHHHHHHhh-CCCCcE-EEEECCCCCHHHHHHHHHcC----cE--EEEeee---eCC--
Q 019647 23 LPGRAYVTFLAGNGDYVKGVVGLAKGLRKV-KTAYPL-VVAVLPDVPEEHRNILESQG----CI--VREIEP---VYP-- 89 (337)
Q Consensus 23 ~~~~AyvT~l~~d~~Yl~~a~vll~SL~~~-~~~~~l-vilv~~~is~~~~~~L~~~~----~~--i~~V~~---i~~-- 89 (337)
++-+=||. + +| | +.++.|.+.|+..+ ++...+ +.++||+++...++.+-..+ .. +..|+. +..
T Consensus 246 p~l~Hy~i-f-Sd-N-vlAAsVvInStv~Ns~~p~~~VFHIVTD~ln~~amk~Wf~~n~~~~a~I~V~~Iedf~~ln~~~ 321 (559)
T PLN02523 246 PSLYHYAI-F-SD-N-VIAASVVVNSAVKNAKEPWKHVFHVVTDRMNLAAMKVMFKMRDLNGAHVEVKAVEDYKFLNSSY 321 (559)
T ss_pred CCcceEEE-e-cC-c-chhhhhhHHHHHHccCCCcceEEEEEeCCCCHHHHHHHHhhCCCCCcEEEEEEeehhhhccccc
Confidence 34444553 3 33 3 89999999999887 444333 33678999987776664332 22 233332 110
Q ss_pred -C-----Cch--h------------------hhhhh--cccccccceeccccc-ccceeEEEecccccccCchhhhCCC-
Q 019647 90 -P-----DNQ--T------------------QYAMA--YYVINYSKLRIWEFV-EYSKMIYLDGDIQVFENIDHLFDLP- 139 (337)
Q Consensus 90 -~-----~~~--~------------------~~~~~--~~~~~y~KL~i~~L~-~ydrVLYLDaDilV~~dideLf~~~- 139 (337)
+ +.. . ++..+ .+..+|.||+||++. +++||||||+|+||++||++||+++
T Consensus 322 ~pvlk~l~s~~~~~~~f~~~~~~~~~~~~~~k~~~p~ylS~~ny~Rf~IPeLLP~ldKVLYLD~DVVVq~DLseLw~iDL 401 (559)
T PLN02523 322 VPVLRQLESANLQKFYFENKLENATKDSSNMKFRNPKYLSMLNHLRFYLPEMYPKLHRILFLDDDVVVQKDLTGLWKIDM 401 (559)
T ss_pred chHHHhhhhhhhhhhhccccccccccccccccccCcchhhHHHHHHHHHHHHhcccCeEEEEeCCEEecCCHHHHHhCcC
Confidence 0 000 0 00001 234678999999985 6999999999999999999999985
Q ss_pred -CCceeeeechhccCCCCCCCcccccccccCCCCCCCCcccCCCCCccccceeEEEecCHHHHHHHHHHHh----cCCCC
Q 019647 140 -DGYFYAVMDCFCEKTWSKTPQYKIGYCQQCPDRVRWPAEMGEPPALYFNAGMFVFEPSISTYHDLLETVK----VTPPT 214 (337)
Q Consensus 140 -~~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~~g~~~~~yfNsGVmlin~~~~~~~~l~~~~~----~~~~~ 214 (337)
++.+|||.||.... ..+.++ .+. .+| .+. ..+ ....++||+||||||+++|+.+++.+.+. .....
T Consensus 402 ~gkv~aAVeDc~~~~--~r~~~~-ln~--s~p-~i~--~yF-Ns~aC~wnsGVmlINL~~WRe~nITek~~~w~~ln~~~ 472 (559)
T PLN02523 402 DGKVNGAVETCFGSF--HRYAQY-LNF--SHP-LIK--EKF-NPKACAWAYGMNIFDLDAWRREKCTEQYHYWQNLNENR 472 (559)
T ss_pred CCceEEEehhhhhHH--HHHHHh-hcc--cch-hhh--hCc-CCCcccccCCcEEEeHHHHHHhchHHHHHHHHHhcccc
Confidence 67899999874310 000000 000 001 000 000 12357888899999999999877766543 12345
Q ss_pred CCCChHHHH---HHhcCceeeccCcccccchhhhcCC-ccCCCCCeEEEEeecCCCCCCCcCCCCCccchhhhHHHHHHH
Q 019647 215 TFAEQDFLN---MYFKHIYKPIPLVYNLVLAMLWRHP-ENVELDKVKVVHYCAAGSKPWRFTGEEENMQREDVKMLVKKW 290 (337)
Q Consensus 215 ~~~DQdiLN---~~f~~~~~~L~~~yN~~~~~~~~~~-~~~~~~~~~IiHf~g~~~KPW~~~~~~~~~~~~~~~~~~~~W 290 (337)
.+.|||.|| .+|.++++.|+++||++.. .+... .....++++||||+| ..|||...+ ...+.++|
T Consensus 473 ~l~DqdaLpp~LivF~gri~~LD~rWNvlgl-Gy~~~i~~~~i~~paIIHYnG-~~KPWle~~---------i~~yr~~W 541 (559)
T PLN02523 473 TLWKLGTLPPGLITFYSTTKPLDKSWHVLGL-GYNPSISMDEIRNAAVIHFNG-NMKPWLDIA---------MNQFKPLW 541 (559)
T ss_pred ccccccccchHHHHhcCceEecCchhhccCC-ccCCCccccccCCCEEEEECC-CCCccccCC---------CCcchHHH
Confidence 679999995 8999999999999998753 22211 112357899999999 899998765 24678999
Q ss_pred HHHHhhc
Q 019647 291 WDIYNDE 297 (337)
Q Consensus 291 w~~~~~~ 297 (337)
|+|++.+
T Consensus 542 ~kYl~~~ 548 (559)
T PLN02523 542 TKYVDYD 548 (559)
T ss_pred HHHHccC
Confidence 9997654
No 12
>PLN02718 Probable galacturonosyltransferase
Probab=99.96 E-value=5.6e-29 Score=245.33 Aligned_cols=241 Identities=13% Similarity=0.192 Sum_probs=160.2
Q ss_pred CCCcHHHHHHHHHHHHhh--CCC-CcEEEEECCCCCHHHHHHHHHcC----cEEEEeeeeCC----CCc----hhhhh--
Q 019647 35 NGDYVKGVVGLAKGLRKV--KTA-YPLVVAVLPDVPEEHRNILESQG----CIVREIEPVYP----PDN----QTQYA-- 97 (337)
Q Consensus 35 d~~Yl~~a~vll~SL~~~--~~~-~~lvilv~~~is~~~~~~L~~~~----~~i~~V~~i~~----~~~----~~~~~-- 97 (337)
+++|+ ++.|++.|+..+ ++. +.|+ +++++++.+.++.+.... ..+ +|..++. +.. ...+.
T Consensus 320 sDNvl-aasVvInSil~Ns~np~~ivFH-VvTD~is~~~mk~wf~l~~~~~a~I-~V~~Iddf~~lp~~~~~~lk~l~s~ 396 (603)
T PLN02718 320 SDNVL-ACSVVVNSTISSSKEPEKIVFH-VVTDSLNYPAISMWFLLNPPGKATI-QILNIDDMNVLPADYNSLLMKQNSH 396 (603)
T ss_pred cCCce-eEEEEhhhhhhccCCCCcEEEE-EEeCCCCHHHHHHHHHhCCCCCcEE-EEEecchhccccccchhhhhhcccc
Confidence 35575 899999999887 333 3334 578999999888776542 222 2222220 110 01111
Q ss_pred h--hcccccccceeccccc-ccceeEEEecccccccCchhhhCCC--CCceeeeechhccCCCCC-CCcccccccccCCC
Q 019647 98 M--AYYVINYSKLRIWEFV-EYSKMIYLDGDIQVFENIDHLFDLP--DGYFYAVMDCFCEKTWSK-TPQYKIGYCQQCPD 171 (337)
Q Consensus 98 ~--~~~~~~y~KL~i~~L~-~ydrVLYLDaDilV~~dideLf~~~--~~~iaAv~d~~~~~~~~~-~~~~~~~~~~~~p~ 171 (337)
. .++..+|+||++|++. +++||||||+|+||++||++||+++ ++.+|||.||.......+ ...+ +++. .|
T Consensus 397 ~~~~~S~~~y~Rl~ipellp~l~KvLYLD~DvVV~~DL~eL~~iDl~~~v~aaVedC~~~~~~~~~~~~~-lnfs--~p- 472 (603)
T PLN02718 397 DPRYISALNHARFYLPDIFPGLNKIVLFDHDVVVQRDLSRLWSLDMKGKVVGAVETCLEGEPSFRSMDTF-INFS--DP- 472 (603)
T ss_pred ccccccHHHHHHHHHHHHhcccCEEEEEECCEEecCCHHHHhcCCCCCcEEEEeccccccccchhhhhhh-hhcc--ch-
Confidence 1 1345789999999975 6899999999999999999999985 667899998753211000 0000 0100 01
Q ss_pred CCCCCcccCCCCCccccceeEEEecCHHHHHHHH----HHHhcCCCCCCCChHHHH---HHhcCceeeccCcccccchhh
Q 019647 172 RVRWPAEMGEPPALYFNAGMFVFEPSISTYHDLL----ETVKVTPPTTFAEQDFLN---MYFKHIYKPIPLVYNLVLAML 244 (337)
Q Consensus 172 ~~~~p~~~g~~~~~yfNsGVmlin~~~~~~~~l~----~~~~~~~~~~~~DQdiLN---~~f~~~~~~L~~~yN~~~~~~ 244 (337)
.+. ... ....+|||+||||||+++|+.+++. ++++......+.|||.|| .+|.+++..||++||... ..
T Consensus 473 ~i~--~~f-n~~~CyfNsGVlLIDLk~WReenITe~~~~~l~~n~~~~l~dqdaLpp~LlvF~gri~~LD~rWNv~g-LG 548 (603)
T PLN02718 473 WVA--KKF-DPKACTWAFGMNLFDLEEWRRQKLTSVYHKYLQLGVKRPLWKAGSLPIGWLTFYNQTVALDKRWHVLG-LG 548 (603)
T ss_pred hhh--ccc-CCCccccccceEEEeHHHHHhcChHHHHHHHHHhccCccccCcccccHHHHHhcCceeecChHHhccC-cc
Confidence 000 001 1246899999999999999876554 455443333568899987 899999999999999876 33
Q ss_pred hcCC-ccCCCCCeEEEEeecCCCCCCCcCCCCCccchhhhHHHHHHHHHHHhh
Q 019647 245 WRHP-ENVELDKVKVVHYCAAGSKPWRFTGEEENMQREDVKMLVKKWWDIYND 296 (337)
Q Consensus 245 ~~~~-~~~~~~~~~IiHf~g~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~~~~~ 296 (337)
+... ......+++||||+| ..|||...+ ...|.++|-+|.+.
T Consensus 549 ~~~~i~~~~i~~aaIIHYnG-~~KPWle~~---------i~~yr~~W~k~v~~ 591 (603)
T PLN02718 549 HESGVGASDIEQAAVIHYDG-VMKPWLDIG---------IGKYKRYWNIHVPY 591 (603)
T ss_pred ccccccccccCCCEEEEECC-CCCccccCC---------hhhHHHHHHhhcCC
Confidence 3211 112367899999999 899999986 45788999888653
No 13
>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=99.95 E-value=2.9e-27 Score=219.68 Aligned_cols=218 Identities=13% Similarity=0.183 Sum_probs=142.6
Q ss_pred EEEEeeCCCcHHHHHHHHHHHHhhCC-CCcEEEEECCCCCHHHHHHHHHc---CcEEE--EeeeeCCCCch-hhhhhhcc
Q 019647 29 VTFLAGNGDYVKGVVGLAKGLRKVKT-AYPLVVAVLPDVPEEHRNILESQ---GCIVR--EIEPVYPPDNQ-TQYAMAYY 101 (337)
Q Consensus 29 vT~l~~d~~Yl~~a~vll~SL~~~~~-~~~lvilv~~~is~~~~~~L~~~---~~~i~--~V~~i~~~~~~-~~~~~~~~ 101 (337)
+++++++++ +..+.|+++|+..++. ...++|+..+.++++.+++|++. +...+ .+.++..|... ..+..-..
T Consensus 3 ~~vv~~g~~-~~~~~~~lkSil~~n~~~l~Fhi~~d~~~~~~~~~~l~~~~~~~~~~i~~~i~~I~~P~~~~~~ws~l~~ 81 (304)
T cd06430 3 LAVVACGER-LEETLTMLKSAIVFSQKPLRFHIFAEDQLKQSFKEKLDDWPELIDRKFNYTLHPITFPSGNAAEWKKLFK 81 (304)
T ss_pred EEEEEcCCc-HHHHHHHHHHHHHhCCCCEEEEEEECCccCHHHHHHHHHHHHhccceeeeEEEEEecCccchhhhhhccc
Confidence 455556665 8999999999987763 34456554434888877777765 22222 45565544321 12221112
Q ss_pred cccccceeccccc-ccceeEEEecccccccCchhhhCC--C--CCceeee-echhccCCCCCCCcccccccccCCCCCCC
Q 019647 102 VINYSKLRIWEFV-EYSKMIYLDGDIQVFENIDHLFDL--P--DGYFYAV-MDCFCEKTWSKTPQYKIGYCQQCPDRVRW 175 (337)
Q Consensus 102 ~~~y~KL~i~~L~-~ydrVLYLDaDilV~~dideLf~~--~--~~~iaAv-~d~~~~~~~~~~~~~~~~~~~~~p~~~~~ 175 (337)
..+|+||++++++ ++|||||||+|+||++||++||++ + +..+||+ ++... . ..+|
T Consensus 82 ~~~y~RL~ip~lLp~~dkvLYLD~Dii~~~dI~eL~~~~~df~~~~~aA~v~e~~~-~------------------~~~~ 142 (304)
T cd06430 82 PCAAQRLFLPSLLPDVDSLLYVDTDILFLRPVEEIWSFLKKFNSTQLAAMAPEHEE-P------------------NIGW 142 (304)
T ss_pred HHHHHHHHHHHHhhhhceEEEeccceeecCCHHHHHHHHhhcCCCeEEEEEecccc-c------------------chhh
Confidence 3689999999975 689999999999999999999987 3 3345554 44211 0 0011
Q ss_pred Cc---ccCCCCCccccceeEEEecCHHHH---------------HHHHHHHhcC-CCCCCCChHHHHHHhcCc---eeec
Q 019647 176 PA---EMGEPPALYFNAGMFVFEPSISTY---------------HDLLETVKVT-PPTTFAEQDFLNMYFKHI---YKPI 233 (337)
Q Consensus 176 p~---~~g~~~~~yfNsGVmlin~~~~~~---------------~~l~~~~~~~-~~~~~~DQdiLN~~f~~~---~~~L 233 (337)
.. ........+||||||+||+++|+. +++++.++++ ..+.++|||+||.+|.++ +..|
T Consensus 143 ~~~~~~~~~~~~~gFNSGVmLmNL~~wR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~DQDiLN~v~~~~p~~~~~L 222 (304)
T cd06430 143 YNRFARHPYYGKTGVNSGVMLMNLTRMRRKYFKNDMTPVGLRWEEILMPLYKKYKLKITWGDQDLINIIFHHNPEMLYVF 222 (304)
T ss_pred hhhhcccCcccccccccceeeeeHHHHHhhhcccccchhhhhHHHHHHHHHHhcccCCCCCCHHHHHHHHcCCCCeEEEc
Confidence 00 000112357999999999999875 2345555554 357789999999999997 8999
Q ss_pred cCcccccchhh-hc-CCccCCCCCeEEEEeecCCCC
Q 019647 234 PLVYNLVLAML-WR-HPENVELDKVKVVHYCAAGSK 267 (337)
Q Consensus 234 ~~~yN~~~~~~-~~-~~~~~~~~~~~IiHf~g~~~K 267 (337)
|.+||++.... |. ..+..+.+.++|||+++ +.|
T Consensus 223 p~~wN~~~d~~~y~~~~~~~~~~~~~~~H~n~-~~~ 257 (304)
T cd06430 223 PCHWNYRPDHCMYGSNCKAAEEEGVFILHGNR-GVY 257 (304)
T ss_pred CccccCCccceeecccccccccccceEEEcCC-CCC
Confidence 99999876321 11 11112357899999997 444
No 14
>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family. C-terminal domain of glycoprotein glucosyltransferase (UGT). UGT is a large glycoprotein whose C-terminus contains the catalytic activity. This catalytic C-terminal domain is highly homologous to Glycosyltransferase Family 8 (GT 8) and contains the DXD motif that coordinates donor sugar binding, characteristic for Family 8 glycosyltransferases. GT 8 proteins are retaining enzymes based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. The non-catalytic N-terminal portion of the human UTG1 (HUGT1) has been shown to monitor the protein folding status and activate its glucosyltransferase activity.
Probab=99.94 E-value=1.5e-26 Score=211.75 Aligned_cols=213 Identities=15% Similarity=0.182 Sum_probs=140.7
Q ss_pred eeCCCcHHHHHHHHHHHHhhCC-CCcEEEEECCCCCHHHHHHHHHc----CcEEEEeeeeCCCCchhhhhh-hccccccc
Q 019647 33 AGNGDYVKGVVGLAKGLRKVKT-AYPLVVAVLPDVPEEHRNILESQ----GCIVREIEPVYPPDNQTQYAM-AYYVINYS 106 (337)
Q Consensus 33 ~~d~~Yl~~a~vll~SL~~~~~-~~~lvilv~~~is~~~~~~L~~~----~~~i~~V~~i~~~~~~~~~~~-~~~~~~y~ 106 (337)
++++.|+++++|++.||..++. .+.+++ +++++|++.++.|++. +..+..+ .++.++....+.. .+...+|.
T Consensus 7 ~~~~~y~~~~~v~l~Sll~nn~~~~~fyi-l~~~is~e~~~~l~~~~~~~~~~i~~i-~i~~~~~~~~~~~~~~~~~~y~ 84 (248)
T cd06432 7 ASGHLYERFLRIMMLSVMKNTKSPVKFWF-IKNFLSPQFKEFLPEMAKEYGFEYELV-TYKWPRWLHKQTEKQRIIWGYK 84 (248)
T ss_pred cCcHHHHHHHHHHHHHHHHcCCCCEEEEE-EeCCCCHHHHHHHHHHHHHhCCceEEE-EecChhhhhcccccchhHHHHH
Confidence 5788999999999999999863 455664 4588999998888653 4433211 2221111111100 01123577
Q ss_pred ceeccccc--ccceeEEEecccccccCchhhhCCC--CCceeeeechhccCCCCCCCccc-ccccccCCCCCCCCcccCC
Q 019647 107 KLRIWEFV--EYSKMIYLDGDIQVFENIDHLFDLP--DGYFYAVMDCFCEKTWSKTPQYK-IGYCQQCPDRVRWPAEMGE 181 (337)
Q Consensus 107 KL~i~~L~--~ydrVLYLDaDilV~~dideLf~~~--~~~iaAv~d~~~~~~~~~~~~~~-~~~~~~~p~~~~~p~~~g~ 181 (337)
||.+.+++ ++|||||||+|+||.+||++||+++ +..+|||.|+...... ....++ .++ |...+
T Consensus 85 rL~~~~lLP~~vdkvLYLD~Dilv~~dL~eL~~~dl~~~~~Aav~d~~~~~~~-~~~~~~~~~~---------~~~~l-- 152 (248)
T cd06432 85 ILFLDVLFPLNVDKVIFVDADQIVRTDLKELMDMDLKGAPYGYTPFCDSRKEM-DGFRFWKQGY---------WKSHL-- 152 (248)
T ss_pred HHHHHHhhhhccCEEEEEcCCceecccHHHHHhcCcCCCeEEEeeccccchhc-ccchhhhhhh---------hhhhc--
Confidence 88887654 5899999999999999999999985 5678888875321100 000000 000 00011
Q ss_pred CCCccccceeEEEecCHHHHHHHHHHH----h---cC-CCCCCCChHHHHHHhcCc-eeeccCcccccchhhhcCCccCC
Q 019647 182 PPALYFNAGMFVFEPSISTYHDLLETV----K---VT-PPTTFAEQDFLNMYFKHI-YKPIPLVYNLVLAMLWRHPENVE 252 (337)
Q Consensus 182 ~~~~yfNsGVmlin~~~~~~~~l~~~~----~---~~-~~~~~~DQdiLN~~f~~~-~~~L~~~yN~~~~~~~~~~~~~~ 252 (337)
....|||||||+||+++|+.+.+.+.+ + +. .++.++|||+||.++.++ ++.||.+||++.. |...+ .
T Consensus 153 ~~~~YfNSGVmliNL~~wR~~~i~~~~~~~~~~l~~~~~~l~~~DQDiLN~v~~~~~i~~Lp~~w~~~~~--~~~~~--~ 228 (248)
T cd06432 153 RGRPYHISALYVVDLKRFRRIAAGDRLRGQYQQLSQDPNSLANLDQDLPNNMQHQVPIFSLPQEWLWCET--WCSDE--S 228 (248)
T ss_pred CCCCccceeeEEEeHHHHHHHhHHHHHHHHHHHHhcCCCccccCCchhhHHHhccCCeEECChHHHHHHH--Hhccc--c
Confidence 124699999999999999876655422 1 22 347789999999999886 9999999999754 32222 3
Q ss_pred CCCeEEEEeec
Q 019647 253 LDKVKVVHYCA 263 (337)
Q Consensus 253 ~~~~~IiHf~g 263 (337)
.+.+.+|||..
T Consensus 229 ~~~~~~~~~~~ 239 (248)
T cd06432 229 KKKAKTIDLCN 239 (248)
T ss_pred cCccceeeccc
Confidence 78999999975
No 15
>PLN02659 Probable galacturonosyltransferase
Probab=99.94 E-value=2.6e-27 Score=230.32 Aligned_cols=180 Identities=18% Similarity=0.316 Sum_probs=127.9
Q ss_pred ccccccceeccccc-ccceeEEEecccccccCchhhhCCC--CCceeeeechhccCCC---CCCCcccccccccCCCCCC
Q 019647 101 YVINYSKLRIWEFV-EYSKMIYLDGDIQVFENIDHLFDLP--DGYFYAVMDCFCEKTW---SKTPQYKIGYCQQCPDRVR 174 (337)
Q Consensus 101 ~~~~y~KL~i~~L~-~ydrVLYLDaDilV~~dideLf~~~--~~~iaAv~d~~~~~~~---~~~~~~~~~~~~~~p~~~~ 174 (337)
+..+|+||++|++. +++||||||+|+||++||++||+++ ++.+|||+||.....+ ....++ ++. ..|. +.
T Consensus 328 S~~nY~RL~IPeLLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkv~AAVeDc~~~d~~~~~~~~~~y-L~~--s~p~-i~ 403 (534)
T PLN02659 328 SVMNHIRIHLPELFPSLNKVVFLDDDIVVQTDLSPLWDIDMNGKVNGAVETCRGEDKFVMSKKLKSY-LNF--SHPL-IA 403 (534)
T ss_pred eHHHHHHHHHHHHhhhcCeEEEeeCCEEEcCchHHHHhCCCCCcEEEEeeccccccchhhhHHHHHh-hcc--cchh-hh
Confidence 44679999999985 6999999999999999999999986 6788999987432111 000000 000 0010 00
Q ss_pred CCcccCCCCCccccceeEEEecCHHHHHHH----HHHHhcC--CCCCCCChHHH---HHHhcCceeeccCcccccchhhh
Q 019647 175 WPAEMGEPPALYFNAGMFVFEPSISTYHDL----LETVKVT--PPTTFAEQDFL---NMYFKHIYKPIPLVYNLVLAMLW 245 (337)
Q Consensus 175 ~p~~~g~~~~~yfNsGVmlin~~~~~~~~l----~~~~~~~--~~~~~~DQdiL---N~~f~~~~~~L~~~yN~~~~~~~ 245 (337)
..+. ...+|||+|||+||+++|+.+++ ++++++. ....+.|||+| |.+|.++++.||.+||+.. ..+
T Consensus 404 --~yFn-~~~cYfNsGVlLINLk~WRe~nITek~l~~l~~n~~~~l~l~DQdaLp~~LivF~g~v~~LD~rWN~~g-Lg~ 479 (534)
T PLN02659 404 --KNFD-PNECAWAYGMNIFDLEAWRKTNISSTYHHWLEENLKSDLSLWQLGTLPPGLIAFHGHVHVIDPFWHMLG-LGY 479 (534)
T ss_pred --hccC-ccccceecceeEeeHHHHHhcChHHHHHHHHHhcccccccccccccchHHHHHhcCCEEECChhheecC-Ccc
Confidence 0011 23689999999999999986544 4555443 23667899999 6889999999999999964 333
Q ss_pred cCC-ccCCCCCeEEEEeecCCCCCCCcCCCCCccchhhhHHHHHHHHHHHhhcc
Q 019647 246 RHP-ENVELDKVKVVHYCAAGSKPWRFTGEEENMQREDVKMLVKKWWDIYNDES 298 (337)
Q Consensus 246 ~~~-~~~~~~~~~IiHf~g~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~~~~~~~ 298 (337)
... .....++++||||+| ..|||...+ ..+++++|-+|++.+-
T Consensus 480 ~~~~~~~~i~~paIIHYnG-~~KPW~~~~---------~~~yr~~W~kYl~~s~ 523 (534)
T PLN02659 480 QENTSLADAESAGVVHFNG-RAKPWLDIA---------FPQLRPLWAKYIDSSD 523 (534)
T ss_pred cccccccccCCcEEEEECC-CCCcccccc---------CCcchhHHHHHhccCC
Confidence 211 122357899999999 899999987 3578999999987654
No 16
>PLN02867 Probable galacturonosyltransferase
Probab=99.94 E-value=2.5e-27 Score=231.37 Aligned_cols=180 Identities=23% Similarity=0.363 Sum_probs=127.0
Q ss_pred ccccccceeccccc-ccceeEEEecccccccCchhhhCCC--CCceeeeechhccCCCCCCCcccccccc-cCCCCCCCC
Q 019647 101 YVINYSKLRIWEFV-EYSKMIYLDGDIQVFENIDHLFDLP--DGYFYAVMDCFCEKTWSKTPQYKIGYCQ-QCPDRVRWP 176 (337)
Q Consensus 101 ~~~~y~KL~i~~L~-~ydrVLYLDaDilV~~dideLf~~~--~~~iaAv~d~~~~~~~~~~~~~~~~~~~-~~p~~~~~p 176 (337)
+..+|.||++|++. +++||||||+|+||++||++||+++ ++.+|||.|..|........++. .+.. ..| .+
T Consensus 329 S~lnYlRflIPeLLP~LdKVLYLD~DVVVqgDLseLwdiDL~gkviaAV~D~~c~~~~~~~~~~~-~YlNfsnp-~i--- 403 (535)
T PLN02867 329 SLLNHLRIYIPELFPDLNKIVFLDDDVVVQHDLSSLWELDLNGKVVGAVVDSWCGDNCCPGRKYK-DYLNFSHP-LI--- 403 (535)
T ss_pred hHHHHHHHHHHHHhhccCeEEEecCCEEEcCchHHHHhCcCCCCeEEEEeccccccccccchhhh-hhccccch-hh---
Confidence 45679999999985 6899999999999999999999996 66799998865432110000000 0000 001 00
Q ss_pred cccCC-CCCccccceeEEEecCHHHHHHHHH----HHhcCC--CCCCCChHHHHH---HhcCceeeccCcccccchhhhc
Q 019647 177 AEMGE-PPALYFNAGMFVFEPSISTYHDLLE----TVKVTP--PTTFAEQDFLNM---YFKHIYKPIPLVYNLVLAMLWR 246 (337)
Q Consensus 177 ~~~g~-~~~~yfNsGVmlin~~~~~~~~l~~----~~~~~~--~~~~~DQdiLN~---~f~~~~~~L~~~yN~~~~~~~~ 246 (337)
..+. ...+|||+||||||+++|+.+++.+ +++... ...+.|||.||. +|.++|..||++||+. +..+.
T Consensus 404 -~~~~~p~~cYFNSGVmLINL~~WRe~nITek~~~~Le~n~~~~~~l~dqd~LN~~LlvF~g~v~~LD~rWNv~-gLgy~ 481 (535)
T PLN02867 404 -SSNLDQERCAWLYGMNVFDLKAWRRTNITEAYHKWLKLSLNSGLQLWQPGALPPALLAFKGHVHPIDPSWHVA-GLGSR 481 (535)
T ss_pred -hccCCCCCcceecceeeeeHHHHHHhcHHHHHHHHHHhchhcccccccccccchHHHHhcCcEEECChhhccc-CCCcc
Confidence 0111 2468999999999999998776654 344332 256789999995 9999999999999994 33333
Q ss_pred CCcc--CCCCCeEEEEeecCCCCCCCcCCCCCccchhhhHHHHHHHHHHHhhc
Q 019647 247 HPEN--VELDKVKVVHYCAAGSKPWRFTGEEENMQREDVKMLVKKWWDIYNDE 297 (337)
Q Consensus 247 ~~~~--~~~~~~~IiHf~g~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~~~~~~ 297 (337)
.+.. ...++++||||+| ..|||+..+ ...++++|-+|.+-+
T Consensus 482 ~~~~~~~~i~~paIIHYnG-~~KPW~e~~---------~~~yR~~W~kyl~~~ 524 (535)
T PLN02867 482 PPEVPREILESAAVLHFSG-PAKPWLEIG---------FPEVRSLWYRHVNFS 524 (535)
T ss_pred cccchhhhcCCcEEEEECC-CCCcccccC---------CCchhHHHHHhcCcc
Confidence 2211 1257899999999 899999886 347899998886543
No 17
>PLN02769 Probable galacturonosyltransferase
Probab=99.94 E-value=1.5e-26 Score=229.22 Aligned_cols=170 Identities=19% Similarity=0.241 Sum_probs=122.8
Q ss_pred ccccccceeccccc-ccceeEEEecccccccCchhhhCCC--CCceeeeechhccCCCCCCCcccccccccCCCCCCCCc
Q 019647 101 YVINYSKLRIWEFV-EYSKMIYLDGDIQVFENIDHLFDLP--DGYFYAVMDCFCEKTWSKTPQYKIGYCQQCPDRVRWPA 177 (337)
Q Consensus 101 ~~~~y~KL~i~~L~-~ydrVLYLDaDilV~~dideLf~~~--~~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p~ 177 (337)
+..+|.||+||++. +.+||||||+|+||++||++||+++ ++.+|||++|.... .....| + .
T Consensus 436 S~~nh~RfyIPELLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviAAVedc~~rl--~~~~~y-l-------------~ 499 (629)
T PLN02769 436 SVFSHSHFLLPEIFKKLKKVVVLDDDVVVQRDLSFLWNLDMGGKVNGAVQFCGVRL--GQLKNY-L-------------G 499 (629)
T ss_pred cHHHHHHHHHHHHhhhcCeEEEEeCCEEecCcHHHHhcCCCCCCeEEEehhhhhhh--hhhhhh-h-------------c
Confidence 34678999999986 5899999999999999999999985 66899998874210 000000 0 0
Q ss_pred ccCC-CCCccccceeEEEecCHHHHHHHHH----HHhcC-----CCCCCCChHHHHHHhcCceeeccCcccccchhhhcC
Q 019647 178 EMGE-PPALYFNAGMFVFEPSISTYHDLLE----TVKVT-----PPTTFAEQDFLNMYFKHIYKPIPLVYNLVLAMLWRH 247 (337)
Q Consensus 178 ~~g~-~~~~yfNsGVmlin~~~~~~~~l~~----~~~~~-----~~~~~~DQdiLN~~f~~~~~~L~~~yN~~~~~~~~~ 247 (337)
..++ ...+|||+||||||+++|+.+++.+ +++.. ......+|+++|.+|.+++..||.+||++.. .+..
T Consensus 500 ~~~F~~~~CyFNSGVLLINL~~WRk~nITe~~~~~~~~~~~~~~~~~~~~~Lp~lnlvF~g~v~~LD~rWNv~gL-G~~~ 578 (629)
T PLN02769 500 DTNFDTNSCAWMSGLNVIDLDKWRELDVTETYLKLLQKFSKDGEESLRAAALPASLLTFQDLIYPLDDRWVLSGL-GHDY 578 (629)
T ss_pred ccCCCccccccccCeeEeeHHHHHHhCHHHHHHHHHHHhhhcccccccccCcCHHHHHhcCeEEECCHHHccccc-cccc
Confidence 1111 2468999999999999988664433 33221 1244578889999999999999999998742 2211
Q ss_pred C-ccCCCCCeEEEEeecCCCCCCCcCCCCCccchhhhHHHHHHHHHHHhhc
Q 019647 248 P-ENVELDKVKVVHYCAAGSKPWRFTGEEENMQREDVKMLVKKWWDIYNDE 297 (337)
Q Consensus 248 ~-~~~~~~~~~IiHf~g~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~~~~~~ 297 (337)
. ......+++||||+| ..|||+..+ ...++++||+|++.+
T Consensus 579 ~i~~~~i~~paIIHYnG-~~KPW~e~~---------i~~yr~~W~kYl~~~ 619 (629)
T PLN02769 579 GIDEQAIKKAAVLHYNG-NMKPWLELG---------IPKYKKYWKRFLNRD 619 (629)
T ss_pred cccccccCCcEEEEECC-CCCCccCCC---------CChHHHHHHHHhccC
Confidence 1 112357999999999 899999875 247899999998754
No 18
>PLN02870 Probable galacturonosyltransferase
Probab=99.93 E-value=5.4e-27 Score=228.12 Aligned_cols=180 Identities=21% Similarity=0.353 Sum_probs=126.4
Q ss_pred ccccccceeccccc-ccceeEEEecccccccCchhhhCCC--CCceeeeechhccCCCCCCCcccccccc-cCCCCCCCC
Q 019647 101 YVINYSKLRIWEFV-EYSKMIYLDGDIQVFENIDHLFDLP--DGYFYAVMDCFCEKTWSKTPQYKIGYCQ-QCPDRVRWP 176 (337)
Q Consensus 101 ~~~~y~KL~i~~L~-~ydrVLYLDaDilV~~dideLf~~~--~~~iaAv~d~~~~~~~~~~~~~~~~~~~-~~p~~~~~p 176 (337)
+..+|+||++|++. +.+||||||+|+||++||++||+++ ++.+|||.||.....+....++. .+.. .+|. +
T Consensus 327 S~lny~Rl~LPelLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviaAVeDc~~~~~~~~~~~~~-~YfNfs~p~-i--- 401 (533)
T PLN02870 327 SLLNHLRIYLPELFPNLDKVVFLDDDVVIQRDLSPLWDIDLGGKVNGAVETCRGEDEWVMSKRFR-NYFNFSHPL-I--- 401 (533)
T ss_pred CHHHHHHHHHHHHhhhcCeEEEEeCCEEecCcHHHHhhCCCCCceEEEEccccccchhhhhhhhh-hhcccccch-h---
Confidence 45679999999985 6999999999999999999999995 67899999974321110000010 0000 0110 0
Q ss_pred cccCC-CCCccccceeEEEecCHHHHHHHH----HHHhcC--CCCCCCChHHH---HHHhcCceeeccCcccccchhhhc
Q 019647 177 AEMGE-PPALYFNAGMFVFEPSISTYHDLL----ETVKVT--PPTTFAEQDFL---NMYFKHIYKPIPLVYNLVLAMLWR 246 (337)
Q Consensus 177 ~~~g~-~~~~yfNsGVmlin~~~~~~~~l~----~~~~~~--~~~~~~DQdiL---N~~f~~~~~~L~~~yN~~~~~~~~ 246 (337)
..+. ...+|||+|||+||+++|+.+++. +++++. ....+.|||+| |.+|.+++..||.+||+.. ..|.
T Consensus 402 -~~~fd~~~cyfNSGVlLINL~~WRe~nITek~~~~l~~n~~~~l~l~DQdaLp~~livf~g~v~~LD~rWN~~g-Lgy~ 479 (533)
T PLN02870 402 -AKNLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKGHVHPIDPSWHMLG-LGYQ 479 (533)
T ss_pred -hcccCcccceeeccchhccHHHHHHcChHHHHHHHHHhhhhcCceecccccccHhHHHhcCceEECChHHhcCC-CCCc
Confidence 1122 246899999999999999865554 445433 24678999999 6899999999999999864 3332
Q ss_pred CC-ccCCCCCeEEEEeecCCCCCCCcCCCCCccchhhhHHHHHHHHHHHhhc
Q 019647 247 HP-ENVELDKVKVVHYCAAGSKPWRFTGEEENMQREDVKMLVKKWWDIYNDE 297 (337)
Q Consensus 247 ~~-~~~~~~~~~IiHf~g~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~~~~~~ 297 (337)
.. .....++++||||+| ..|||...+ ...++.+|-+|.+.+
T Consensus 480 ~~~~~~~i~~aaIIHY~G-~~KPW~~~~---------~~~yr~~W~kYl~~s 521 (533)
T PLN02870 480 SKTNIESVKKAAVIHYNG-QSKPWLEIG---------FEHLRPFWTKYVNYS 521 (533)
T ss_pred ccccccccCCcEEEEECC-CCCCccccC---------ccchhHHHHHHHccC
Confidence 11 112367899999999 899999776 346778888886654
No 19
>PLN02742 Probable galacturonosyltransferase
Probab=99.93 E-value=1.8e-25 Score=217.93 Aligned_cols=178 Identities=18% Similarity=0.279 Sum_probs=126.9
Q ss_pred ccccccceeccccc-ccceeEEEecccccccCchhhhCCC--CCceeeeechhccCCCCCCCcccccccccCCCCCCCCc
Q 019647 101 YVINYSKLRIWEFV-EYSKMIYLDGDIQVFENIDHLFDLP--DGYFYAVMDCFCEKTWSKTPQYKIGYCQQCPDRVRWPA 177 (337)
Q Consensus 101 ~~~~y~KL~i~~L~-~ydrVLYLDaDilV~~dideLf~~~--~~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p~ 177 (337)
+..+|.||++|++. +.+||||||+|+||.+||++||+++ ++.+|||+||..+. ..+..| ++. .+| .+ .
T Consensus 337 s~~~y~R~~lP~llp~l~KvlYLD~DvVV~~DL~eL~~~DL~~~viaAVedC~~~f--~ry~~y-Lnf--S~p-~i---~ 407 (534)
T PLN02742 337 SMLNHLRFYIPEIYPALEKVVFLDDDVVVQKDLTPLFSIDLHGNVNGAVETCLETF--HRYHKY-LNF--SHP-LI---S 407 (534)
T ss_pred cHHHHHHHHHHHHhhccCeEEEEeCCEEecCChHHHhcCCCCCCEEEEeCchhhhh--hhhhhh-hcc--cch-hh---h
Confidence 35679999999975 6899999999999999999999985 67899999984321 000000 000 011 00 0
Q ss_pred ccCCCCCccccceeEEEecCHHHHHHHHHHH----hcCCCCCCCChHHHHH---HhcCceeeccCcccccchhhhcC-Cc
Q 019647 178 EMGEPPALYFNAGMFVFEPSISTYHDLLETV----KVTPPTTFAEQDFLNM---YFKHIYKPIPLVYNLVLAMLWRH-PE 249 (337)
Q Consensus 178 ~~g~~~~~yfNsGVmlin~~~~~~~~l~~~~----~~~~~~~~~DQdiLN~---~f~~~~~~L~~~yN~~~~~~~~~-~~ 249 (337)
.......+|||+||||||+++|+.+++.+.+ +......+.||+.||. +|.+++..||++||+.. +.+.. ..
T Consensus 408 ~~f~~~aC~fNsGV~ViDL~~WRe~nITe~~~~w~e~n~~~~l~d~gaLpp~LLaF~g~~~~LD~rWNv~g-LG~~~~v~ 486 (534)
T PLN02742 408 SHFDPDACGWAFGMNVFDLVAWRKANVTAIYHYWQEQNVDRTLWKLGTLPPGLLTFYGLTEPLDRRWHVLG-LGYDTNID 486 (534)
T ss_pred ccCCCCccccccCcEEEeHHHHHhhcHHHHHHHHHHhccccccccccccchHHHHHcCcceecChhheecc-cccccccc
Confidence 1001246999999999999999877665533 2233456789999995 59999999999999974 22321 11
Q ss_pred cCCCCCeEEEEeecCCCCCCCcCCCCCccchhhhHHHHHHHHHHHhhcc
Q 019647 250 NVELDKVKVVHYCAAGSKPWRFTGEEENMQREDVKMLVKKWWDIYNDES 298 (337)
Q Consensus 250 ~~~~~~~~IiHf~g~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~~~~~~~ 298 (337)
....+++.||||+| ..|||...+ ...+.++|++|.+.+-
T Consensus 487 ~~~i~~aaILHynG-~~KPWl~~~---------i~~yr~~W~kYl~~s~ 525 (534)
T PLN02742 487 PRLIESAAVLHFNG-NMKPWLKLA---------IERYKPLWERYVNYSH 525 (534)
T ss_pred hhhccCCeEEEECC-CCCcccccC---------CcccchHHHHHHccCC
Confidence 12467999999999 899999986 3467899999987543
No 20
>PLN02829 Probable galacturonosyltransferase
Probab=99.92 E-value=5.2e-26 Score=223.96 Aligned_cols=175 Identities=19% Similarity=0.306 Sum_probs=125.2
Q ss_pred ccccccceeccccc-ccceeEEEecccccccCchhhhCCC--CCceeeeechhccCCCCCCCcccccccccCCCCCCCCc
Q 019647 101 YVINYSKLRIWEFV-EYSKMIYLDGDIQVFENIDHLFDLP--DGYFYAVMDCFCEKTWSKTPQYKIGYCQQCPDRVRWPA 177 (337)
Q Consensus 101 ~~~~y~KL~i~~L~-~ydrVLYLDaDilV~~dideLf~~~--~~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p~ 177 (337)
+..+|+||++|++. +++||||||+|+||++||++||+++ ++.+|||.||.... ..+..+ ... ..|. +
T Consensus 441 S~lnY~RfyLPeLLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviAAVedc~~~f--~r~~~~-l~f--s~p~-i---- 510 (639)
T PLN02829 441 SILNHLRFYLPEIFPKLNKVLFLDDDIVVQKDLTGLWSIDLKGNVNGAVETCGESF--HRFDRY-LNF--SNPL-I---- 510 (639)
T ss_pred hHHHHHHHHHHHHhcccCeEEEEeCCEEeCCChHHHHhCCCCCceEEEeccchhhh--hhhhhh-hhc--cchH-h----
Confidence 45678999999986 5899999999999999999999986 66789999874321 000000 000 0010 0
Q ss_pred ccCC-CCCccccceeEEEecCHHHHHHHHH----HHhcCCCCCCCChHHHHHH---hcCceeeccCcccccchhhhcCCc
Q 019647 178 EMGE-PPALYFNAGMFVFEPSISTYHDLLE----TVKVTPPTTFAEQDFLNMY---FKHIYKPIPLVYNLVLAMLWRHPE 249 (337)
Q Consensus 178 ~~g~-~~~~yfNsGVmlin~~~~~~~~l~~----~~~~~~~~~~~DQdiLN~~---f~~~~~~L~~~yN~~~~~~~~~~~ 249 (337)
..++ ...+|||+||||||+++|+.+++.+ +++....-...||+.||.. |.+++..|+++||+... .|. +.
T Consensus 511 ~~~Fn~~~CyFNSGVmVINL~~WRe~nITe~y~~wm~~n~~r~L~dlgaLPp~Ll~F~g~i~~LD~rWNv~GL-Gy~-~~ 588 (639)
T PLN02829 511 SKNFDPHACGWAYGMNVFDLDEWKRQNITEVYHSWQKLNHDRQLWKLGTLPPGLITFWKRTYPLDRSWHVLGL-GYN-PN 588 (639)
T ss_pred hhccCCcccceecceEEEeHHHHHHhChHHHHHHHHHHccCCccccccCCChHHHHhcCceEecChhheecCC-CCC-cc
Confidence 0011 2468999999999999998766544 4433323345899999976 59999999999999864 332 21
Q ss_pred c--CCCCCeEEEEeecCCCCCCCcCCCCCccchhhhHHHHHHHHHHHhhc
Q 019647 250 N--VELDKVKVVHYCAAGSKPWRFTGEEENMQREDVKMLVKKWWDIYNDE 297 (337)
Q Consensus 250 ~--~~~~~~~IiHf~g~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~~~~~~ 297 (337)
. ....+++||||+| ..|||...+ ...+.++|.+|....
T Consensus 589 v~~~~i~~aaIIHynG-~~KPWle~~---------i~~yr~lW~kYl~~~ 628 (639)
T PLN02829 589 VNQRDIERAAVIHYNG-NMKPWLEIG---------IPKYRNYWSKYVDYD 628 (639)
T ss_pred cchhcccCCeEEEECC-CCCccccCC---------cccchHHHHHHHhcC
Confidence 1 1367899999999 899999986 357899999997643
No 21
>PLN02910 polygalacturonate 4-alpha-galacturonosyltransferase
Probab=99.91 E-value=2.5e-25 Score=218.90 Aligned_cols=174 Identities=20% Similarity=0.292 Sum_probs=127.1
Q ss_pred ccccccceeccccc-ccceeEEEecccccccCchhhhCCC--CCceeeeechhccCCCCCCCcccccccccCCCCCCCCc
Q 019647 101 YVINYSKLRIWEFV-EYSKMIYLDGDIQVFENIDHLFDLP--DGYFYAVMDCFCEKTWSKTPQYKIGYCQQCPDRVRWPA 177 (337)
Q Consensus 101 ~~~~y~KL~i~~L~-~ydrVLYLDaDilV~~dideLf~~~--~~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p~ 177 (337)
+..+|+||++|++. +.+||||||+|+||++||++||+++ ++.+|||.+|..+..+ ...+ +.. .+|. + .
T Consensus 459 S~lnY~Rf~LPelLp~l~KVLYLD~DVVV~gDLseLw~iDL~g~v~AAVedc~~~f~r--~~~y-lnf--s~P~-i---~ 529 (657)
T PLN02910 459 SMLNHLRFYLPEVYPKLEKILFLDDDIVVQKDLTPLWSIDMQGMVNGAVETCKESFHR--FDKY-LNF--SNPK-I---S 529 (657)
T ss_pred hHHHHHHHHHHHHhhhcCeEEEEeCCEEecCchHHHHhCCcCCceEEEecccchhhhh--hhhh-hcc--CChh-h---h
Confidence 34678999999986 5899999999999999999999985 6678899887542100 0000 000 0110 0 0
Q ss_pred ccCC-CCCccccceeEEEecCHHHHHHHHHHH---hc-CCCCCCCChHHHH---HHhcCceeeccCcccccchhhhcCCc
Q 019647 178 EMGE-PPALYFNAGMFVFEPSISTYHDLLETV---KV-TPPTTFAEQDFLN---MYFKHIYKPIPLVYNLVLAMLWRHPE 249 (337)
Q Consensus 178 ~~g~-~~~~yfNsGVmlin~~~~~~~~l~~~~---~~-~~~~~~~DQdiLN---~~f~~~~~~L~~~yN~~~~~~~~~~~ 249 (337)
. .+ ...+|||+||||||+++|+.+++.+.+ .+ .....+.||+.|| .+|.+++..|+++||+... .+. +.
T Consensus 530 ~-yFNs~aCyfNsGVmVIDL~~WRe~nITe~ye~w~eln~~~~L~dqgsLPpgLLvF~g~i~pLD~rWNv~GL-Gyd-~~ 606 (657)
T PLN02910 530 E-NFDPNACGWAFGMNMFDLKEWRKRNITGIYHYWQDLNEDRTLWKLGSLPPGLITFYNLTYPLDRSWHVLGL-GYD-PA 606 (657)
T ss_pred h-ccCCCCceeecccEEEeHHHHHHhhHHHHHHHHHHhcccccccccCCCChHHHHHhCceeecCchheecCC-CCC-cc
Confidence 0 11 246899999999999999877665533 22 3456789999999 7999999999999999863 332 21
Q ss_pred c--CCCCCeEEEEeecCCCCCCCcCCCCCccchhhhHHHHHHHHHHHhh
Q 019647 250 N--VELDKVKVVHYCAAGSKPWRFTGEEENMQREDVKMLVKKWWDIYND 296 (337)
Q Consensus 250 ~--~~~~~~~IiHf~g~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~~~~~ 296 (337)
. ....+++||||+| ..|||...+ ...++++|-+|+..
T Consensus 607 v~~~~i~~AAVLHynG-~~KPWl~l~---------i~~Yr~~W~kYl~~ 645 (657)
T PLN02910 607 LNQTEIENAAVVHYNG-NYKPWLDLA---------IAKYKPYWSRYVQY 645 (657)
T ss_pred cccccccCcEEEEeCC-CCCcccccC---------cccchHHHHHHccC
Confidence 1 1367899999999 899999886 35789999999763
No 22
>COG5597 Alpha-N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.71 E-value=3.1e-19 Score=161.85 Aligned_cols=239 Identities=24% Similarity=0.374 Sum_probs=141.6
Q ss_pred CCCcHHHHHHHHHHHH------------hhC---CCCcEEEEECCCCCHHHHHHHHHcCcEEEEeeeeCCCCch-----h
Q 019647 35 NGDYVKGVVGLAKGLR------------KVK---TAYPLVVAVLPDVPEEHRNILESQGCIVREIEPVYPPDNQ-----T 94 (337)
Q Consensus 35 d~~Yl~~a~vll~SL~------------~~~---~~~~lvilv~~~is~~~~~~L~~~~~~i~~V~~i~~~~~~-----~ 94 (337)
|..|..+..++.+++. .+. +++ ++++...++.+...+.|+..|..+..|..++..+.. .
T Consensus 68 ng~~al~n~~t~~d~y~N~Tr~lv~~Lk~~~etkaKl-V~vL~mkg~d~wk~d~l~ldga~~~~vq~i~~hevv~~~~di 146 (368)
T COG5597 68 NGDYALGNRATLRDIYLNRTRALVVVLKTGGETKAKL-VEVLTMKGCDLWKTDLLPLDGAFNARVQRINVHEVVPFTKDI 146 (368)
T ss_pred cCcccccchhhhhceeecccceehhhhhhcCcchhhe-eeehhhcccchhhhhccccchHHHHHhccchHhhhhhhhhcc
Confidence 5555555555555543 332 233 344555667766666666555544444554432211 1
Q ss_pred hhhhhcccccccceecccccccceeEEEecccccccCchhhhCCCCCceeeeechhccC-C---------CCCCCccc--
Q 019647 95 QYAMAYYVINYSKLRIWEFVEYSKMIYLDGDIQVFENIDHLFDLPDGYFYAVMDCFCEK-T---------WSKTPQYK-- 162 (337)
Q Consensus 95 ~~~~~~~~~~y~KL~i~~L~~ydrVLYLDaDilV~~dideLf~~~~~~iaAv~d~~~~~-~---------~~~~~~~~-- 162 (337)
.....++...|+||.+|++++||||||||+|.||++++|+||+++-+.++|.+|....+ . ++.++.+.
T Consensus 147 ~~~~~rw~~mftKLrVfeqtEyDRvifLDsDaivlknmDklFd~Pvyef~a~pD~~~sp~~fhrp~~~i~~~ft~~faay 226 (368)
T COG5597 147 KPDFHRWLDMFTKLRVFEQTEYDRVIFLDSDAIVLKNMDKLFDYPVYEFAAAPDVYESPADFHRPNSGIFVSFTPAFAAY 226 (368)
T ss_pred CcCcCcHHHHhHHHHhhhhhhhceEEEeccchHHhhhhHHHhcchhhhhccCCchhhCHHHhcCCCCccceeecHHHHhh
Confidence 11123466789999999999999999999999999999999998855577776643322 0 11111100
Q ss_pred cccc--ccCCCCCCCC-------cccCCCCCccccceeEEEecCHHHHHHHHHHHh--cCCCCCCCChHHHHHHhcC---
Q 019647 163 IGYC--QQCPDRVRWP-------AEMGEPPALYFNAGMFVFEPSISTYHDLLETVK--VTPPTTFAEQDFLNMYFKH--- 228 (337)
Q Consensus 163 ~~~~--~~~p~~~~~p-------~~~g~~~~~yfNsGVmlin~~~~~~~~l~~~~~--~~~~~~~~DQdiLN~~f~~--- 228 (337)
.+.. ...| .+-|+ +...+.-+.+||||+|+++|++..+.++....- -+....+..|.++|..++.
T Consensus 227 g~~r~~ly~P-ylf~a~~dq~~~hstpP~fk~~FnagLmv~~Psk~hm~riv~~alPklydda~mmeqsllnlaYn~~g~ 305 (368)
T COG5597 227 GKMRAALYAP-YLFWARTDQTFLHSTPPDFKLKFNAGLMVGLPSKMHMLRIVWFALPKLYDDADMMEQSLLNLAYNYEGF 305 (368)
T ss_pred cccHhhhccc-cccccccCCcccccCCCcHhhhhccCceeecchHHHHHHHHHHhhHHhhhhhhHHHHHHHHHHHhhhcc
Confidence 0000 0011 11111 011122367899999999999999988877651 1223456789999998763
Q ss_pred -ceeeccCcccccchhhhcCCccCCCCCeEEEEeecCCCCCCCcCCCCCccchhhhHHHHHHHHH
Q 019647 229 -IYKPIPLVYNLVLAMLWRHPENVELDKVKVVHYCAAGSKPWRFTGEEENMQREDVKMLVKKWWD 292 (337)
Q Consensus 229 -~~~~L~~~yN~~~~~~~~~~~~~~~~~~~IiHf~g~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~ 292 (337)
-|.+++++||-. |... .+..-.+.+| .|||+..+.. . -+.....||+
T Consensus 306 FPwerld~~yNG~----wa~~--ndlPylka~H-----gK~W~y~g~~--f----p~i~~~ew~~ 353 (368)
T COG5597 306 FPWERLDPRYNGY----WADA--NDLPYLKAWH-----GKPWFYTGEQ--F----PDIAGLEWPQ 353 (368)
T ss_pred CchhhcCcccccc----cccc--cccchHHHhh-----cCcCCCCccc--C----hhhhcCcChh
Confidence 588999999932 3211 1122233444 5999998743 1 1345667884
No 23
>KOG1950 consensus Glycosyl transferase, family 8 - glycogenin [Carbohydrate transport and metabolism]
Probab=99.33 E-value=3.5e-12 Score=123.54 Aligned_cols=233 Identities=33% Similarity=0.492 Sum_probs=168.5
Q ss_pred cccceecccccccceeEEEecccccccCchhhhCCCCCceeeeechhccCCCCCCCcccccccccCCCCCCCCc--ccCC
Q 019647 104 NYSKLRIWEFVEYSKMIYLDGDIQVFENIDHLFDLPDGYFYAVMDCFCEKTWSKTPQYKIGYCQQCPDRVRWPA--EMGE 181 (337)
Q Consensus 104 ~y~KL~i~~L~~ydrVLYLDaDilV~~dideLf~~~~~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p~--~~g~ 181 (337)
.+.++.++++.++.+.+|++.|+-...+++++|+.....-.+...+.+...+.+..++..+.|...+++.-|+. .+..
T Consensus 113 ~~~~~~~~~~~~~~a~i~~~~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~f~~~~~~~~ 192 (369)
T KOG1950|consen 113 RDDKIKIWRLIEDGAAIYLVDDIQRFRNDDANFDVPNELNYAKLYMFQLDFYSKLVKIDADDCILKNDDLLFSNWPDLFA 192 (369)
T ss_pred cccceeecceeccCceEEEecchhhccCccccccccchhcccccceeeecccccceEEeccchhcCChhhhhhhchhhcc
Confidence 46788888888999999999999999999999999654445556655555555555555566665554333321 1221
Q ss_pred CC--CccccceeEEEecCHHHHHHHHHHHhcCCCCCCCChHHHHHHhcCceeeccCcccccchhhhcCCccCC-----CC
Q 019647 182 PP--ALYFNAGMFVFEPSISTYHDLLETVKVTPPTTFAEQDFLNMYFKHIYKPIPLVYNLVLAMLWRHPENVE-----LD 254 (337)
Q Consensus 182 ~~--~~yfNsGVmlin~~~~~~~~l~~~~~~~~~~~~~DQdiLN~~f~~~~~~L~~~yN~~~~~~~~~~~~~~-----~~ 254 (337)
.+ ...||+|.|++-|+...++.+.+......++.+.+|+++|.+|...-.+.|+.+|+.....|+++.... ..
T Consensus 193 ~~~l~~~~n~~~~v~~ps~~~~~~~~~~~~~~~~~~~~~q~~l~~~f~~~~~~~~~~~n~~~~~~~~~p~~~~l~~~~~~ 272 (369)
T KOG1950|consen 193 TNILPLIFNSGLLVFEPSLCNYKDLMEFSEEFESYNGADQGFLHLIFSWIPDRPPPSVNLNLAKLWRHPKKNDLSRASSV 272 (369)
T ss_pred CCCccceeccCccccCCCccchhhHHHhhcccCCCCCccchhhHHHhhcccCCCcccccccccccccCccccchhhcccc
Confidence 22 345999999999999999888877776667888999999999996555888899998887777663222 22
Q ss_pred CeEEEEeecCCCCCCCcC-CCCCccc-----hhhhHHHHHHHHHHHhhccccccCC---CC--CCCCCCCCcchhHhhhc
Q 019647 255 KVKVVHYCAAGSKPWRFT-GEEENMQ-----REDVKMLVKKWWDIYNDESLDYKKP---SA--DGNAGSVNLQPFIDALS 323 (337)
Q Consensus 255 ~~~IiHf~g~~~KPW~~~-~~~~~~~-----~~~~~~~~~~Ww~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~ 323 (337)
....+||.| ..|||... ..++++. .++....+..||..|+.+..++++- .+ +-.---+-.|..++++.
T Consensus 273 ~~~~~~y~~-~~~p~~~~~~~~~n~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 351 (369)
T KOG1950|consen 273 LRYALHYLG-ANKPELCYRDFDCNLDGDEFPRKDIDSLHKKWWDVYDDMSLDLKVHCKLWAKESTEYPLVRPQAELAAFP 351 (369)
T ss_pred cchhhhccc-cCCCCccccCcccccccccccchhHHHHHhccchhhccCchhhhhccccccccccccchhhchhHHhhcc
Confidence 344569998 54776654 4455543 4556778888999999999998853 22 12222466789999999
Q ss_pred cccceeeecCCCCC
Q 019647 324 DAAAVQFVTAPSAA 337 (337)
Q Consensus 324 ~~~~~~~~~~~~~~ 337 (337)
+....+-..+|+++
T Consensus 352 ~~~~~~~~~~~~~~ 365 (369)
T KOG1950|consen 352 EEHDKIDYKAPRAF 365 (369)
T ss_pred cccccccccCchhh
Confidence 99988888888764
No 24
>PF11051 Mannosyl_trans3: Mannosyltransferase putative; InterPro: IPR022751 Alpha-mannosyltransferase is responsible for the addition of residues to the outer chain of core N-linked polysaccharides and to O-linked mannotriose. It is implicated in late Golgi modifications [][][]. The proteins matching this entry are conserved in fungi and also found in some phototrophic organisms.; GO: 0006486 protein glycosylation
Probab=98.27 E-value=3.5e-06 Score=78.35 Aligned_cols=105 Identities=18% Similarity=0.257 Sum_probs=72.3
Q ss_pred eeCCCcHHHHHHHHHHHHhhCCCCcEEEEEC--CCCCHHHHHHHHH-cCcEEEEeeeeCCCCchhh-hhhhcccccccce
Q 019647 33 AGNGDYVKGVVGLAKGLRKVKTAYPLVVAVL--PDVPEEHRNILES-QGCIVREIEPVYPPDNQTQ-YAMAYYVINYSKL 108 (337)
Q Consensus 33 ~~d~~Yl~~a~vll~SL~~~~~~~~lvilv~--~~is~~~~~~L~~-~~~~i~~V~~i~~~~~~~~-~~~~~~~~~y~KL 108 (337)
+..+.++..+..+++.||+.+.+.||-|++. ++++++.++.|.. ..+.++++..+..++.... +... .-..|.
T Consensus 7 ~~g~~~~~~a~~lI~~LR~~g~~LPIEI~~~~~~dl~~~~~~~l~~~q~v~~vd~~~~~~~~~~~~~~~~~---~~~~K~ 83 (271)
T PF11051_consen 7 TAGDKYLWLALRLIRVLRRLGNTLPIEIIYPGDDDLSKEFCEKLLPDQDVWFVDASCVIDPDYLGKSFSKK---GFQNKW 83 (271)
T ss_pred EecCccHHHHHHHHHHHHHhCCCCCEEEEeCCccccCHHHHHHHhhhhhhheecceEEeeccccccccccC---Cchhhh
Confidence 3466999999999999999999999977776 6799998888876 2233333333332221110 1100 112344
Q ss_pred ecccccccceeEEEecccccccCchhhhCCCC
Q 019647 109 RIWEFVEYSKMIYLDGDIQVFENIDHLFDLPD 140 (337)
Q Consensus 109 ~i~~L~~ydrVLYLDaDilV~~dideLf~~~~ 140 (337)
++--...++.||+||+|.+.+.|++.||+.+.
T Consensus 84 lA~l~ssFeevllLDaD~vpl~~p~~lF~~~~ 115 (271)
T PF11051_consen 84 LALLFSSFEEVLLLDADNVPLVDPEKLFESEE 115 (271)
T ss_pred hhhhhCCcceEEEEcCCcccccCHHHHhcCcc
Confidence 43334589999999999999999999999864
No 25
>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases [].
Probab=97.98 E-value=5.4e-05 Score=67.49 Aligned_cols=171 Identities=16% Similarity=0.185 Sum_probs=92.9
Q ss_pred CCHHHHHHHHHcCcEEEEeeee--CCCCchhhhhh-hcccccccceecc-ccc-ccceeEEEecccccccCchhhhCCCC
Q 019647 66 VPEEHRNILESQGCIVREIEPV--YPPDNQTQYAM-AYYVINYSKLRIW-EFV-EYSKMIYLDGDIQVFENIDHLFDLPD 140 (337)
Q Consensus 66 is~~~~~~L~~~~~~i~~V~~i--~~~~~~~~~~~-~~~~~~y~KL~i~-~L~-~ydrVLYLDaDilV~~dideLf~~~~ 140 (337)
++++..+.|++.+..+..+... ........+.. .+...++.|..+- +++ .--.|+|+|+|++.++|..++|+..+
T Consensus 11 ~D~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~L~~G~~vl~~D~Dvv~~~dp~~~~~~~~ 90 (212)
T PF03407_consen 11 LDEETYDALEELGPPCFYFPSDASESEDSAFRFGSKAFQKLTWLKPKVLLDLLELGYDVLFSDADVVWLRDPLPYFENPD 90 (212)
T ss_pred ECHHHHHHHHhcCCCeEEEecccccccchhhhcCCHHHHHHHHHHHHHHHHHHHcCCceEEecCCEEEecCcHHhhccCC
Confidence 4566778888888765433322 11111111111 1233455665433 333 22359999999999999999994343
Q ss_pred CceeeeechhccCCCCCCCcccccccccCCCCCCCCcccCCCCCccccceeEEEecCHHH---HHHHHHHHhcCCCCCCC
Q 019647 141 GYFYAVMDCFCEKTWSKTPQYKIGYCQQCPDRVRWPAEMGEPPALYFNAGMFVFEPSIST---YHDLLETVKVTPPTTFA 217 (337)
Q Consensus 141 ~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~~g~~~~~yfNsGVmlin~~~~~---~~~l~~~~~~~~~~~~~ 217 (337)
..+....|..... + . ......+|+|+|.++++... ++.+.+.+.+. ....
T Consensus 91 ~Di~~~~d~~~~~----------------~-------~--~~~~~~~n~G~~~~r~t~~~~~~~~~w~~~~~~~--~~~~ 143 (212)
T PF03407_consen 91 ADILFSSDGWDGT----------------N-------S--DRNGNLVNTGFYYFRPTPRTIAFLEDWLERMAES--PGCW 143 (212)
T ss_pred CceEEecCCCccc----------------c-------h--hhcCCccccceEEEecCHHHHHHHHHHHHHHHhC--CCcc
Confidence 3344433321100 0 0 01124569999999999865 34444444432 2335
Q ss_pred ChHHHHHHhcCc--------eeeccCcccccchhhhcC--CccCC--CCCeEEEEeec
Q 019647 218 EQDFLNMYFKHI--------YKPIPLVYNLVLAMLWRH--PENVE--LDKVKVVHYCA 263 (337)
Q Consensus 218 DQdiLN~~f~~~--------~~~L~~~yN~~~~~~~~~--~~~~~--~~~~~IiHf~g 263 (337)
||.++|.++.+. +..||...-......+.. ...+. ..++.+||.+.
T Consensus 144 DQ~~~n~~l~~~~~~~~~~~~~~L~~~~f~~g~~~f~~~~~~~~~~~~~~p~~vH~n~ 201 (212)
T PF03407_consen 144 DQQAFNELLREQAARYGGLRVRFLPPSLFPNGHGYFCQSRDWAWVPTKNKPYIVHANC 201 (212)
T ss_pred hHHHHHHHHHhcccCCcCcEEEEeCHHHeeccccceeecchhhhhccccccceEEEcC
Confidence 999999999763 456666432111111111 01111 35899999985
No 26
>KOG1879 consensus UDP-glucose:glycoprotein glucosyltransferase [Carbohydrate transport and metabolism]
Probab=97.46 E-value=0.00055 Score=73.43 Aligned_cols=219 Identities=16% Similarity=0.204 Sum_probs=124.5
Q ss_pred EEeeCCCcHHHHHHHHHHHHhh-CCCCcEEEEECCCCCHHHHHHHH----HcCcEEEEeeeeCCCCch-hhhhhhccccc
Q 019647 31 FLAGNGDYVKGVVGLAKGLRKV-KTAYPLVVAVLPDVPEEHRNILE----SQGCIVREIEPVYPPDNQ-TQYAMAYYVIN 104 (337)
Q Consensus 31 ~l~~d~~Yl~~a~vll~SL~~~-~~~~~lvilv~~~is~~~~~~L~----~~~~~i~~V~~i~~~~~~-~~~~~~~~~~~ 104 (337)
-+++..-|=.-+..++.|+.++ ++...+. ++..-+|+.-++.+- +.+.++.-|. ...|... .+--+.+ ..
T Consensus 1186 SvASGHLYERflrIMm~SvlknTktpVKFW-fLkNyLSPtFKe~iP~mA~eYnFeyElv~-YkWPrWLhqQ~EKQR--ii 1261 (1470)
T KOG1879|consen 1186 SVASGHLYERFLRIMMLSVLKNTKTPVKFW-FLKNYLSPTFKESIPHMAKEYNFEYELVQ-YKWPRWLHQQTEKQR--II 1261 (1470)
T ss_pred eeccccHHHHHHHHHHHHHHhCCCCceeEE-eehhhcChHHHHHHHHHHHHhCceEEEEE-ecCchhhhhhhhhhh--hh
Confidence 3556777888999999999876 2334444 445568876554443 3344433222 2233211 0000111 12
Q ss_pred c-cceeccc-c--cccceeEEEecccccccCchhhhCCC--CCceeeeechhccCCCCCCCcccccccccCCCCCCCCc-
Q 019647 105 Y-SKLRIWE-F--VEYSKMIYLDGDIQVFENIDHLFDLP--DGYFYAVMDCFCEKTWSKTPQYKIGYCQQCPDRVRWPA- 177 (337)
Q Consensus 105 y-~KL~i~~-L--~~ydrVLYLDaDilV~~dideLf~~~--~~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p~- 177 (337)
| +|+...+ | +..+||||+|+|-||..||.||.+.+ +.+.|=++-|.....---+..|+.|| |.+
T Consensus 1262 WgyKILFLDVLFPL~v~KvIfVDADQIVR~DL~EL~dfdl~GaPygYtPfCdsR~EMDGyRFWK~GY---------W~~h 1332 (1470)
T KOG1879|consen 1262 WGYKILFLDVLFPLNVDKVIFVDADQIVRADLKELMDFDLGGAPYGYTPFCDSRREMDGYRFWKQGY---------WKKH 1332 (1470)
T ss_pred hhhhhhhhhhccccccceEEEEcchHhhhhhhHHHHhcccCCCccccCccccccccccchhHHhhhH---------HHHH
Confidence 2 4544444 3 26899999999999999999998875 44555555443211000011122232 211
Q ss_pred ccCCCCCccccceeEEEecCHHHH----HHHH---HHHhc-CCCCCCCChHHHHHHhcC-ceeeccCcccccchhhhcCC
Q 019647 178 EMGEPPALYFNAGMFVFEPSISTY----HDLL---ETVKV-TPPTTFAEQDFLNMYFKH-IYKPIPLVYNLVLAMLWRHP 248 (337)
Q Consensus 178 ~~g~~~~~yfNsGVmlin~~~~~~----~~l~---~~~~~-~~~~~~~DQdiLN~~f~~-~~~~L~~~yN~~~~~~~~~~ 248 (337)
..| ..|-=|...|+++.+-+. +++. +.+.. ..++.--|||+-|.+... .++.||..|=.+-+ |...
T Consensus 1333 L~g---rkYHISALYVVDLkrFReiaAGDrLR~qYQ~LS~DPNSLsNLDQDLPNnm~hqVpIkSLPqeWLWCET--WC~d 1407 (1470)
T KOG1879|consen 1333 LRG---RKYHISALYVVDLKRFREIAAGDRLRGQYQALSQDPNSLSNLDQDLPNNMQHQVPIKSLPQEWLWCET--WCDD 1407 (1470)
T ss_pred hcc---CccccceeeeeeHHHHHhcccchHHHHHHHhhcCCcchhhhccccccccceeecccccCCcchhhhhh--hcCc
Confidence 223 578889999999776321 1221 12222 234666899999988764 68899988744322 4322
Q ss_pred ccCCCCCeEEEEeecCCCCCCCcC
Q 019647 249 ENVELDKVKVVHYCAAGSKPWRFT 272 (337)
Q Consensus 249 ~~~~~~~~~IiHf~g~~~KPW~~~ 272 (337)
+ ...++++|.-+ .-||...
T Consensus 1408 ~--skkkAktIDLC---nNP~TKE 1426 (1470)
T KOG1879|consen 1408 E--SKKKAKTIDLC---NNPLTKE 1426 (1470)
T ss_pred h--hhhhchhhhhh---cCccccc
Confidence 1 25678888876 4788865
No 27
>PLN03182 xyloglucan 6-xylosyltransferase; Provisional
Probab=94.50 E-value=0.23 Score=48.33 Aligned_cols=88 Identities=19% Similarity=0.132 Sum_probs=54.7
Q ss_pred CccccceeEEEecCHHHHHHHHHHH--------------------hcCCCCCCCChHHHHHHhc-C--ce---eeccCcc
Q 019647 184 ALYFNAGMFVFEPSISTYHDLLETV--------------------KVTPPTTFAEQDFLNMYFK-H--IY---KPIPLVY 237 (337)
Q Consensus 184 ~~yfNsGVmlin~~~~~~~~l~~~~--------------------~~~~~~~~~DQdiLN~~f~-~--~~---~~L~~~y 237 (337)
-..+|+|+++|+...|..+-+-.++ .....+...||.+|-+++. + +| ..|...|
T Consensus 242 W~GLNtGsFLIRNcqWSldlLDaWa~mgp~~~~~~~~g~~l~~~l~~rp~~eaDDQSAlvyLl~~~~~~w~~kv~le~~y 321 (429)
T PLN03182 242 WIGLNTGSFLIRNCQWSLDLLDAWAPMGPKGPIRDEAGKILTAELKGRPAFEADDQSALVYLLLTQRERWGDKVYLENSY 321 (429)
T ss_pred cCccceeeEEEEcCHHHHHHHHHHHhcCCCCchhhhHHHHHHHhhcCCCCCCcccHHHHHHHHHhcchhhccceEEeecc
Confidence 3579999999999987544332221 1112355689999988873 2 23 4677776
Q ss_pred cccchhh-----h------cCCccCCCCCeEEEEeecCCCCCCCcCC
Q 019647 238 NLVLAML-----W------RHPENVELDKVKVVHYCAAGSKPWRFTG 273 (337)
Q Consensus 238 N~~~~~~-----~------~~~~~~~~~~~~IiHf~g~~~KPW~~~~ 273 (337)
-+...-. | .++..-+..-|.|.||+| -||-....
T Consensus 322 ~l~Gyw~~iv~~yee~~~~~~~g~gd~rwPfvtHF~G--ckpC~~~~ 366 (429)
T PLN03182 322 YLHGYWVGLVDRYEEMMEKYHPGLGDDRWPFVTHFVG--CKPCGGYG 366 (429)
T ss_pred eeccccHHHHHHHHHHHHhcCCCCCCcccceeEeecc--ceecCCCC
Confidence 6654210 0 012222345799999999 79987654
No 28
>PF05637 Glyco_transf_34: galactosyl transferase GMA12/MNN10 family; InterPro: IPR008630 This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of Caenorhabditis elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34.; GO: 0016758 transferase activity, transferring hexosyl groups, 0016021 integral to membrane; PDB: 2P72_B 2P73_A 2P6W_A.
Probab=91.78 E-value=0.082 Score=48.26 Aligned_cols=78 Identities=19% Similarity=0.147 Sum_probs=0.0
Q ss_pred CCCccccceeEEEecCHHHHHHHHHHHhcC----CC---CCCCChHHHHHHhcC------ceeeccCcc-cccchhhhcC
Q 019647 182 PPALYFNAGMFVFEPSISTYHDLLETVKVT----PP---TTFAEQDFLNMYFKH------IYKPIPLVY-NLVLAMLWRH 247 (337)
Q Consensus 182 ~~~~yfNsGVmlin~~~~~~~~l~~~~~~~----~~---~~~~DQdiLN~~f~~------~~~~L~~~y-N~~~~~~~~~ 247 (337)
.+...+|+|+++++.+.+.. .+++.+... .. ..+.||++|-.+++. +...+|.++ |.... ..
T Consensus 140 ~d~~gLNtGsFliRns~ws~-~fLd~w~~~~~~~~~~~~~~~~EQsAl~~ll~~~~~~~~~~~~vpq~~~nsy~~---~~ 215 (239)
T PF05637_consen 140 QDWNGLNTGSFLIRNSPWSR-DFLDAWADPLYRNYDWDQLEFDEQSALEHLLQWHPEILSKVALVPQRWFNSYPE---DE 215 (239)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccccccc---cc
Confidence 34578999999999998765 344443221 11 236899999888764 233455321 22111 00
Q ss_pred CccCCCCCeEEEEeec
Q 019647 248 PENVELDKVKVVHYCA 263 (337)
Q Consensus 248 ~~~~~~~~~~IiHf~g 263 (337)
......+...|+||+|
T Consensus 216 ~~~~~~~GDfvvhfaG 231 (239)
T PF05637_consen 216 CNYQYKEGDFVVHFAG 231 (239)
T ss_dssp ----------------
T ss_pred cccccccccccccccc
Confidence 1111245678999998
No 29
>PF07801 DUF1647: Protein of unknown function (DUF1647); InterPro: IPR012444 This entry consists of hypothetical proteins of unknown function.
Probab=90.68 E-value=1.5 Score=36.67 Aligned_cols=53 Identities=11% Similarity=0.117 Sum_probs=45.1
Q ss_pred CCCCeEEEEEEeeCCCcHHHHHHHHHHHHhhCCCCcEEEEECCCCCHHHHHHHHHc
Q 019647 22 SLPGRAYVTFLAGNGDYVKGVVGLAKGLRKVKTAYPLVVAVLPDVPEEHRNILESQ 77 (337)
Q Consensus 22 ~~~~~AyvT~l~~d~~Yl~~a~vll~SL~~~~~~~~lvilv~~~is~~~~~~L~~~ 77 (337)
..+..++||. ++++++..+.-++.|+++..|+..++ ++.-|++++.++.|++.
T Consensus 58 n~~~vvfVSa--~S~~h~~~~~~~i~si~~~~P~~k~i-lY~LgL~~~~i~~L~~~ 110 (142)
T PF07801_consen 58 NSSDVVFVSA--TSDNHFNESMKSISSIRKFYPNHKII-LYDLGLSEEQIKKLKKN 110 (142)
T ss_pred cCCccEEEEE--ecchHHHHHHHHHHHHHHHCCCCcEE-EEeCCCCHHHHHHHHhc
Confidence 3568888884 46789999999999999999998876 78889999999999874
No 30
>KOG1928 consensus Alpha-1,4-N-acetylglucosaminyltransferase [Carbohydrate transport and metabolism]
Probab=90.17 E-value=0.25 Score=47.52 Aligned_cols=72 Identities=15% Similarity=0.140 Sum_probs=46.7
Q ss_pred EEEecccccccCchhhhCCCCCceeeeechhccCCCCCCCcccccccccCCCCCCCCcccCCCCCccccceeEEEecCHH
Q 019647 120 IYLDGDIQVFENIDHLFDLPDGYFYAVMDCFCEKTWSKTPQYKIGYCQQCPDRVRWPAEMGEPPALYFNAGMFVFEPSIS 199 (337)
Q Consensus 120 LYLDaDilV~~dideLf~~~~~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~~g~~~~~yfNsGVmlin~~~~ 199 (337)
||||+|+||++++..|=+. ||..++ .. ...+.|.+||.++..-.
T Consensus 242 vYLDTDvIvLksl~~l~N~----ig~~~~-----------------------~~---------~~~~lnnavl~F~k~Hp 285 (409)
T KOG1928|consen 242 VYLDTDVIVLKSLSNLRNV----IGVDPA-----------------------TQ---------AWTRLNNAVLIFDKNHP 285 (409)
T ss_pred EEeeccEEEeccccccccc----ccccch-----------------------hh---------HHHhhcCceeecCCCCH
Confidence 8999999999999987654 220000 01 12568999999998875
Q ss_pred H-HHHHHHHHhcCC--CCCCCChHHHHHHhc
Q 019647 200 T-YHDLLETVKVTP--PTTFAEQDFLNMYFK 227 (337)
Q Consensus 200 ~-~~~l~~~~~~~~--~~~~~DQdiLN~~f~ 227 (337)
. .+.|.|+...++ .....-.+++..+++
T Consensus 286 fl~~cl~eF~~tfNg~~WG~NGP~LvTRVak 316 (409)
T KOG1928|consen 286 FLLECLREFALTYNGNIWGHNGPYLVTRVAK 316 (409)
T ss_pred HHHHHHHHHHHhccccccccCCcHHHHHHHH
Confidence 4 445555555543 244456667777765
No 31
>PLN03181 glycosyltransferase; Provisional
Probab=87.77 E-value=2.4 Score=41.50 Aligned_cols=57 Identities=12% Similarity=-0.007 Sum_probs=35.4
Q ss_pred ccccceeEEEecCHHHHHHHHHHHh--------------------cCCCCCCCChHHHHHHhc---Cce---eeccCccc
Q 019647 185 LYFNAGMFVFEPSISTYHDLLETVK--------------------VTPPTTFAEQDFLNMYFK---HIY---KPIPLVYN 238 (337)
Q Consensus 185 ~yfNsGVmlin~~~~~~~~l~~~~~--------------------~~~~~~~~DQdiLN~~f~---~~~---~~L~~~yN 238 (337)
..+|+|+++|+.+.|-.+-|-.+.. ......-.||..|-+++- ++| ..|...|-
T Consensus 244 ~GlN~GsFLIRNcqWSl~LLDaWa~Mgp~~p~~~~~G~~l~~~l~~r~~~eaDDQsaLvyll~~~~~~w~~k~ylE~~yy 323 (453)
T PLN03181 244 TALNAGVFLIRNCQWSLDFMDAWASMGPASPEYAKWGKILRSTFKDKLFPESDDQSALVYLLYKHKEKWGDKIYLEGEYY 323 (453)
T ss_pred cccceeeeEEecCHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhCCCCCCCccchHHHHHHHHhccchhccceeeeccee
Confidence 6799999999999865433322221 111234589999987763 233 46666776
Q ss_pred ccc
Q 019647 239 LVL 241 (337)
Q Consensus 239 ~~~ 241 (337)
++.
T Consensus 324 ~~G 326 (453)
T PLN03181 324 FEG 326 (453)
T ss_pred eee
Confidence 664
No 32
>KOG4748 consensus Subunit of Golgi mannosyltransferase complex [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=84.40 E-value=3.1 Score=40.05 Aligned_cols=144 Identities=17% Similarity=0.108 Sum_probs=74.6
Q ss_pred cccccceeEEEecccccccCchhhhCC--CC-C-ceeeeechhccCCCCCCCcccccccccC---CCCCCCCcccCCCCC
Q 019647 112 EFVEYSKMIYLDGDIQVFENIDHLFDL--PD-G-YFYAVMDCFCEKTWSKTPQYKIGYCQQC---PDRVRWPAEMGEPPA 184 (337)
Q Consensus 112 ~L~~ydrVLYLDaDilV~~dideLf~~--~~-~-~iaAv~d~~~~~~~~~~~~~~~~~~~~~---p~~~~~p~~~g~~~~ 184 (337)
+.++.+=+=+||.|.|++..--+|=+. +. . ...+-++ -.+.+.....+.++.++.+ ++++ ..++..+.
T Consensus 172 kyP~AeWIWWlD~DAlimn~~lsL~~~ilk~~~L~~~l~~n--d~~~~~~~n~~~~~~~~~~~d~~~~~---~~ii~qD~ 246 (364)
T KOG4748|consen 172 KYPDAEWIWWLDQDALIMNPDLSLQDHILKPENLVTHLLRN--DQKSINPLNIFRLRPRTPSLDDLEDI---AFIIPQDC 246 (364)
T ss_pred HCCCCcEEEEecccchhhCcccchhHHhcCHHHHHHhhccc--cccccccCCccccccccccccchhhh---ceecccCC
Confidence 345788999999999998643333221 11 0 0111111 0011111111222222221 1122 13444455
Q ss_pred ccccceeEEEecCHHHHHHHHHHHhc----CCCCCCCChHHHHHHhcC------ceeeccCcccccchhhhcCCccCCCC
Q 019647 185 LYFNAGMFVFEPSISTYHDLLETVKV----TPPTTFAEQDFLNMYFKH------IYKPIPLVYNLVLAMLWRHPENVELD 254 (337)
Q Consensus 185 ~yfNsGVmlin~~~~~~~~l~~~~~~----~~~~~~~DQdiLN~~f~~------~~~~L~~~yN~~~~~~~~~~~~~~~~ 254 (337)
..+|+|=+|++.+++.. -+++...+ .......+|++|-.++.. .|..||.|+=-... -.++..-..+
T Consensus 247 nG~naGSfLirns~~~~-~llD~w~dp~l~~~~~~~~Eq~al~~~~e~h~~l~~~vgilp~r~ins~~--~~~~~~g~~e 323 (364)
T KOG4748|consen 247 NGINAGSFLIRNSEWGR-LLLDAWNDPLLYELLWGQKEQDALGHFLENHPQLHSHVGILPLRYINSYP--NGAPGYGYEE 323 (364)
T ss_pred CCccccceEEecCccch-hHHHhccCHHHHhhccchHHHHHHHHHHhhchhhhhheeeccHHHHhcCC--CCCCCCcccc
Confidence 67999999999887321 22332221 123456899999888764 57777776421110 0122222356
Q ss_pred CeEEEEeec
Q 019647 255 KVKVVHYCA 263 (337)
Q Consensus 255 ~~~IiHf~g 263 (337)
...++||.|
T Consensus 324 gdlvvhFaG 332 (364)
T KOG4748|consen 324 GDLVVHFAG 332 (364)
T ss_pred CCeEEEecc
Confidence 889999999
No 33
>cd02515 Glyco_transf_6 Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens. Glycosyltransferase family 6, GT_6, comprises enzymes with three known activities: alpha-1,3-galactosyltransferase, alpha-1,3 N-acetylgalactosaminyltransferase, and alpha-galactosyltransferase. UDP-galactose:beta-galactosyl alpha-1,3-galactosyltransferase (alpha3GT) catalyzes the transfer of galactose from UDP-alpha-d-galactose into an alpha-1,3 linkage with beta-galactosyl groups in glycoconjugates. The enzyme exists in most mammalian species but is absent from humans, apes, and old world monkeys as a result of the mutational inactivation of the gene. The alpha-1,3 N-acetylgalactosaminyltransferase and alpha-galactosyltransferase are responsible for the production of the human ABO blood group antigens. A N-acetylgalactosaminyltransferases use a UDP-GalNAc donor to convert the H-antigen acceptor to the A antigen, whereas a galactosyltransferase use
Probab=80.15 E-value=8.5 Score=35.61 Aligned_cols=189 Identities=12% Similarity=0.128 Sum_probs=90.2
Q ss_pred EEeeCCCcHHHHHHHHHHHHhhC-CCCcE-EEEECCCCCHHHHHHHHHcCcEEEEeeeeCCCCchhhhhhhcccccccce
Q 019647 31 FLAGNGDYVKGVVGLAKGLRKVK-TAYPL-VVAVLPDVPEEHRNILESQGCIVREIEPVYPPDNQTQYAMAYYVINYSKL 108 (337)
Q Consensus 31 ~l~~d~~Yl~~a~vll~SL~~~~-~~~~l-vilv~~~is~~~~~~L~~~~~~i~~V~~i~~~~~~~~~~~~~~~~~y~KL 108 (337)
++|+ .+|..-..-.+.|-.++- +++++ +++.||.-+.--.-.|.. +.++ .|-.+ ++. .+|...+..|+
T Consensus 40 vfat-GkY~~f~~~F~~SAEk~Fm~g~~v~YyVFTD~~~~~p~v~lg~-~r~~-~V~~v--~~~-----~~W~~~sl~Rm 109 (271)
T cd02515 40 VFAV-GKYTEFLERFLESAEKHFMVGYRVIYYIFTDKPAAVPEVELGP-GRRL-TVLKI--AEE-----SRWQDISMRRM 109 (271)
T ss_pred EEEe-ccHHHHHHHHHHHHHHhccCCCeeEEEEEeCCcccCcccccCC-Ccee-EEEEe--ccc-----cCCcHHHHHHH
Confidence 3544 689988888999988763 45554 345566432100000100 1111 12122 110 12333455565
Q ss_pred ecc-----cc--cccceeEEEecccccccCch-hhhCCCCCceeeeechhccCCCCCCCcccccccccCCCCCCC-Cccc
Q 019647 109 RIW-----EF--VEYSKMIYLDGDIQVFENID-HLFDLPDGYFYAVMDCFCEKTWSKTPQYKIGYCQQCPDRVRW-PAEM 179 (337)
Q Consensus 109 ~i~-----~L--~~ydrVLYLDaDilV~~did-eLf~~~~~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~-p~~~ 179 (337)
.++ ++ -++|-+.++|+|+++.+++. |.+. ..+|...-.... ....+|..+. .|....+ |..
T Consensus 110 ~~~~~~~~~~~~~e~DYlF~~dvd~~F~~~ig~E~Lg---~lva~lHp~~y~---~~~~~fpYER---rp~S~AyIp~~- 179 (271)
T cd02515 110 KTLADHIADRIGHEVDYLFCMDVDMVFQGPFGVETLG---DSVAQLHPWWYG---KPRKQFPYER---RPSSAAYIPEG- 179 (271)
T ss_pred HHHHHHHHHhhcccCCEEEEeeCCceEeecCCHHHhh---hhheecChhhhc---CCCCCCCCcC---CCCccccccCC-
Confidence 544 22 27899999999999999887 3331 122221110000 0000111010 0100000 111
Q ss_pred CCCCCccccceeEEEecCH--HHHHHHHHH----HhcCCCCCCCChHHHHHHhcCc--eeeccCcccccc
Q 019647 180 GEPPALYFNAGMFVFEPSI--STYHDLLET----VKVTPPTTFAEQDFLNMYFKHI--YKPIPLVYNLVL 241 (337)
Q Consensus 180 g~~~~~yfNsGVmlin~~~--~~~~~l~~~----~~~~~~~~~~DQdiLN~~f~~~--~~~L~~~yN~~~ 241 (337)
+..-|+-+||.-=.+.. ..-+.+.+. .++.-.-.+.|..-||.+|-.+ .+.||+.|+...
T Consensus 180 --eGdfYy~Ga~~GG~~~~vl~l~~~c~~~i~~D~~n~I~A~wHDESHLNkYf~~~Kp~KiLSPeY~w~e 247 (271)
T cd02515 180 --EGDFYYHGAVFGGSVEEVYRLTRACHEGILADKANGIEARWHDESHLNKYFLLHKPTKVLSPEYLWDD 247 (271)
T ss_pred --CCCeEEeeeecCccHHHHHHHHHHHHHHHHHHHhCCceEEeecHhHhHHHHhhCCCCeecChhhcCCc
Confidence 23456666665444332 111222222 2221123579999999998643 689999988764
No 34
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=76.45 E-value=14 Score=29.88 Aligned_cols=81 Identities=10% Similarity=0.011 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHhhCC-CCcEEEEECCCCCHHHHHHHHHcCcEEEEeeeeCCCCchhhhhhhcccccccceecccccccc
Q 019647 39 VKGVVGLAKGLRKVKT-AYPLVVAVLPDVPEEHRNILESQGCIVREIEPVYPPDNQTQYAMAYYVINYSKLRIWEFVEYS 117 (337)
Q Consensus 39 l~~a~vll~SL~~~~~-~~~lvilv~~~is~~~~~~L~~~~~~i~~V~~i~~~~~~~~~~~~~~~~~y~KL~i~~L~~yd 117 (337)
...+.-++.||.+... ...++ ++.++-+++..+.+++....+ ..+..+++.. .. -.+-...+..+.+
T Consensus 9 ~~~l~~~l~sl~~~~~~~~~ii-ivdd~s~~~~~~~~~~~~~~~---~~~~~~~~~g-~~-------~a~n~~~~~~~~~ 76 (166)
T cd04186 9 LEYLKACLDSLLAQTYPDFEVI-VVDNASTDGSVELLRELFPEV---RLIRNGENLG-FG-------AGNNQGIREAKGD 76 (166)
T ss_pred HHHHHHHHHHHHhccCCCeEEE-EEECCCCchHHHHHHHhCCCe---EEEecCCCcC-hH-------HHhhHHHhhCCCC
Confidence 5667788899877643 44444 456666666666676654322 2222222211 11 1111222333789
Q ss_pred eeEEEecccccccC
Q 019647 118 KMIYLDGDIQVFEN 131 (337)
Q Consensus 118 rVLYLDaDilV~~d 131 (337)
-++++|+|.++..+
T Consensus 77 ~i~~~D~D~~~~~~ 90 (166)
T cd04186 77 YVLLLNPDTVVEPG 90 (166)
T ss_pred EEEEECCCcEECcc
Confidence 99999999988665
No 35
>PRK15384 type III secretion system protein; Provisional
Probab=74.90 E-value=3 Score=37.85 Aligned_cols=32 Identities=22% Similarity=0.358 Sum_probs=24.5
Q ss_pred ccceeEEEecccccccCchhhhCCCCCceeeeec
Q 019647 115 EYSKMIYLDGDIQVFENIDHLFDLPDGYFYAVMD 148 (337)
Q Consensus 115 ~ydrVLYLDaDilV~~dideLf~~~~~~iaAv~d 148 (337)
.-+-+||||+|||+.+.+--|+.-++ ||.-.|
T Consensus 215 ~~~GCIYLDaDMilT~KLG~ly~PDG--IavhV~ 246 (336)
T PRK15384 215 TNSGCIYLDADMIITEKLGGIYIPDG--IAVHVE 246 (336)
T ss_pred CCCceEEeeccceeecccccEEcCCc--eEEEEE
Confidence 34679999999999999998886665 544333
No 36
>PF05704 Caps_synth: Capsular polysaccharide synthesis protein; InterPro: IPR008441 This entry consists of several capsular polysaccharide proteins. Capsular polysaccharide (CPS) is a major virulence factor in Streptococcus pneumoniae. This family is often transcribed with putative glycosyl transferases to give rise to bifunctional proteins [].
Probab=74.43 E-value=11 Score=35.18 Aligned_cols=96 Identities=15% Similarity=0.196 Sum_probs=54.7
Q ss_pred CCCCCCeEEEEEEeeCCCcHHH-HHHHHHHHHhhCCCCcEEEEECCCCCHHHHHHHHHcCcEEEEeeeeCCCCc-hhhhh
Q 019647 20 PASLPGRAYVTFLAGNGDYVKG-VVGLAKGLRKVKTAYPLVVAVLPDVPEEHRNILESQGCIVREIEPVYPPDN-QTQYA 97 (337)
Q Consensus 20 ~~~~~~~AyvT~l~~d~~Yl~~-a~vll~SL~~~~~~~~lvilv~~~is~~~~~~L~~~~~~i~~V~~i~~~~~-~~~~~ 97 (337)
....++..|+-..-+-++ +|. +..++.|++++.++++++++ +.+ .+++. + +.|+. ...+.
T Consensus 41 ~~~~~k~IW~~W~QG~e~-aP~~Vk~ci~s~~k~~~~~~Vi~l-t~~-------Ni~~Y----v-----~~P~~i~~k~~ 102 (276)
T PF05704_consen 41 PETNEKIIWVCWWQGEEN-APEIVKKCINSWRKNAPDYEVILL-TED-------NIKDY----V-----DIPDFILEKYE 102 (276)
T ss_pred cCCCCCcEEEEECCCccc-cCHHHHHHHHHHHHHCCCCeEEEE-ChH-------HHHHH----c-----CCchhHHHHHH
Confidence 334566688876643333 344 67899999999999998754 431 12211 0 11110 00111
Q ss_pred h----hcccccccceecccc-cccceeEEEecccccccCchhhhC
Q 019647 98 M----AYYVINYSKLRIWEF-VEYSKMIYLDGDIQVFENIDHLFD 137 (337)
Q Consensus 98 ~----~~~~~~y~KL~i~~L-~~ydrVLYLDaDilV~~dideLf~ 137 (337)
. ....+-+.|+.+... .+ +|+||++++.++|++.+.
T Consensus 103 ~g~i~~a~~SDilR~~LL~~yGG----vWiDatv~~t~~l~~~~~ 143 (276)
T PF05704_consen 103 KGKISPAHFSDILRLALLYKYGG----VWIDATVYLTKPLDDEIF 143 (276)
T ss_pred cCCCchhHHHHHHHHHHHHHcCc----EEeCCceEECCchhHHHh
Confidence 0 001122556655432 34 899999999999998765
No 37
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=74.41 E-value=8.7 Score=30.14 Aligned_cols=84 Identities=14% Similarity=0.077 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHhhCC-CCcEEEEECCCCCHHHHHHHHHcCcE---EEEeeeeCCCCchhhhhhhcccccccceeccccc
Q 019647 39 VKGVVGLAKGLRKVKT-AYPLVVAVLPDVPEEHRNILESQGCI---VREIEPVYPPDNQTQYAMAYYVINYSKLRIWEFV 114 (337)
Q Consensus 39 l~~a~vll~SL~~~~~-~~~lvilv~~~is~~~~~~L~~~~~~---i~~V~~i~~~~~~~~~~~~~~~~~y~KL~i~~L~ 114 (337)
...+..++.|+.+... .+.++ +++++-+++..+.+.+.... ...+.. .+... .. ..+-...+..
T Consensus 9 ~~~l~~~l~s~~~~~~~~~~i~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~g-~~-------~~~~~~~~~~ 76 (156)
T cd00761 9 EPYLERCLESLLAQTYPNFEVI-VVDDGSTDGTLEILEEYAKKDPRVIRVIN---EENQG-LA-------AARNAGLKAA 76 (156)
T ss_pred HHHHHHHHHHHHhCCccceEEE-EEeCCCCccHHHHHHHHHhcCCCeEEEEe---cCCCC-hH-------HHHHHHHHHh
Confidence 5667788889887653 44555 45565555555555544321 111111 11110 00 1111122222
Q ss_pred ccceeEEEecccccccCchh
Q 019647 115 EYSKMIYLDGDIQVFENIDH 134 (337)
Q Consensus 115 ~ydrVLYLDaDilV~~dide 134 (337)
+.|.++++|+|.++..+.-+
T Consensus 77 ~~d~v~~~d~D~~~~~~~~~ 96 (156)
T cd00761 77 RGEYILFLDADDLLLPDWLE 96 (156)
T ss_pred cCCEEEEECCCCccCccHHH
Confidence 68999999999998776443
No 38
>PRK15382 non-LEE encoded effector protein NleB; Provisional
Probab=74.40 E-value=3.2 Score=37.66 Aligned_cols=31 Identities=23% Similarity=0.414 Sum_probs=24.2
Q ss_pred cceeEEEecccccccCchhhhCCCCCceeeeec
Q 019647 116 YSKMIYLDGDIQVFENIDHLFDLPDGYFYAVMD 148 (337)
Q Consensus 116 ydrVLYLDaDilV~~dideLf~~~~~~iaAv~d 148 (337)
-+-+||||+|||+.+.+--|+.-++ ||.-.|
T Consensus 211 ~~GCIYLD~DMilT~KLG~ly~PDG--IavhV~ 241 (326)
T PRK15382 211 CEGCIYLDADMIITDKLGVLYAPDG--IAVHVD 241 (326)
T ss_pred CCceEEeecceeeecccccEEcCCc--eEEEEE
Confidence 5679999999999999998886665 544333
No 39
>PRK15383 type III secretion system protein; Provisional
Probab=74.06 E-value=3.3 Score=37.62 Aligned_cols=31 Identities=19% Similarity=0.292 Sum_probs=24.1
Q ss_pred cceeEEEecccccccCchhhhCCCCCceeeeec
Q 019647 116 YSKMIYLDGDIQVFENIDHLFDLPDGYFYAVMD 148 (337)
Q Consensus 116 ydrVLYLDaDilV~~dideLf~~~~~~iaAv~d 148 (337)
-+-+||||+|||+.+.+--|+.-++ ||.-.|
T Consensus 219 ~~GCIYLD~DMilT~KLG~ly~PDG--IavhV~ 249 (335)
T PRK15383 219 GGGCIYLDADMLLTDKLGTLYLPDG--IAIHVS 249 (335)
T ss_pred CCceEEeecceeeecccccEEcCCc--eEEEEE
Confidence 4679999999999999998886665 544333
No 40
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=73.15 E-value=20 Score=31.84 Aligned_cols=103 Identities=12% Similarity=0.088 Sum_probs=52.2
Q ss_pred CCCCeEEEEEEeeCCCcHHHHHHHHHHHHhhC-CC--CcEEEEECCCCCHHHHHHHHHcCcEEEEeeeeCCCCchhhhhh
Q 019647 22 SLPGRAYVTFLAGNGDYVKGVVGLAKGLRKVK-TA--YPLVVAVLPDVPEEHRNILESQGCIVREIEPVYPPDNQTQYAM 98 (337)
Q Consensus 22 ~~~~~AyvT~l~~d~~Yl~~a~vll~SL~~~~-~~--~~lvilv~~~is~~~~~~L~~~~~~i~~V~~i~~~~~~~~~~~ 98 (337)
..++.+.+. .+.|+ ...+..++.|+.... +. .+++ ++.++-++...+.+++.... .+..+..+++.. ..
T Consensus 27 ~~~~isVvi-p~~n~--~~~l~~~l~si~~q~~~~~~~eii-vvdd~s~d~t~~~~~~~~~~--~v~~i~~~~~~g-~~- 98 (251)
T cd06439 27 YLPTVTIII-PAYNE--EAVIEAKLENLLALDYPRDRLEII-VVSDGSTDGTAEIAREYADK--GVKLLRFPERRG-KA- 98 (251)
T ss_pred CCCEEEEEE-ecCCc--HHHHHHHHHHHHhCcCCCCcEEEE-EEECCCCccHHHHHHHHhhC--cEEEEEcCCCCC-hH-
Confidence 344555554 22343 355667788887643 33 3444 45666666666666654322 122222222211 11
Q ss_pred hcccccccceecccccccceeEEEecccccccC-chhhhCC
Q 019647 99 AYYVINYSKLRIWEFVEYSKMIYLDGDIQVFEN-IDHLFDL 138 (337)
Q Consensus 99 ~~~~~~y~KL~i~~L~~ydrVLYLDaDilV~~d-ideLf~~ 138 (337)
..+-...+....|-|+++|+|+++..+ +..|.+.
T Consensus 99 ------~a~n~gi~~a~~d~i~~lD~D~~~~~~~l~~l~~~ 133 (251)
T cd06439 99 ------AALNRALALATGEIVVFTDANALLDPDALRLLVRH 133 (251)
T ss_pred ------HHHHHHHHHcCCCEEEEEccccCcCHHHHHHHHHH
Confidence 111111122235889999999999765 5555554
No 41
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=72.48 E-value=15 Score=32.38 Aligned_cols=88 Identities=14% Similarity=0.032 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHhhCC---CCcEEEEECCCCCHHHHHHHHHcCcEEEEeeeeCCCCchhhhhhhcccccccceecccccc
Q 019647 39 VKGVVGLAKGLRKVKT---AYPLVVAVLPDVPEEHRNILESQGCIVREIEPVYPPDNQTQYAMAYYVINYSKLRIWEFVE 115 (337)
Q Consensus 39 l~~a~vll~SL~~~~~---~~~lvilv~~~is~~~~~~L~~~~~~i~~V~~i~~~~~~~~~~~~~~~~~y~KL~i~~L~~ 115 (337)
-..+.-++.||.+... .++++ ++.++-+++..+.++........+..+..+.. .... .+-...+...
T Consensus 12 ~~~l~~~l~sl~~q~~~~~~~evi-vvd~~s~d~~~~~~~~~~~~~~~v~~i~~~~~--~~~~-------a~N~g~~~a~ 81 (249)
T cd02525 12 EKYIEELLESLLNQSYPKDLIEII-VVDGGSTDGTREIVQEYAAKDPRIRLIDNPKR--IQSA-------GLNIGIRNSR 81 (249)
T ss_pred hhhHHHHHHHHHhccCCCCccEEE-EEeCCCCccHHHHHHHHHhcCCeEEEEeCCCC--CchH-------HHHHHHHHhC
Confidence 3556677888876532 34454 45666555556666654322222333322211 0111 1111222236
Q ss_pred cceeEEEecccccccC-chhhh
Q 019647 116 YSKMIYLDGDIQVFEN-IDHLF 136 (337)
Q Consensus 116 ydrVLYLDaDilV~~d-ideLf 136 (337)
.|-+++||+|.++..+ +..+.
T Consensus 82 ~d~v~~lD~D~~~~~~~l~~~~ 103 (249)
T cd02525 82 GDIIIRVDAHAVYPKDYILELV 103 (249)
T ss_pred CCEEEEECCCccCCHHHHHHHH
Confidence 8999999999988655 44554
No 42
>PF04488 Gly_transf_sug: Glycosyltransferase sugar-binding region containing DXD motif ; InterPro: IPR007577 This entry represents those sugar-binding regions of glycosyltransferases that contain a DXD motif. The DXD motif is a short conserved motif found in many families of glycosyltransferases, which add a range of different sugars to other sugars, phosphates and proteins. DXD-containing glycosyltransferases all use nucleoside diphosphate sugars as donors and require divalent cations, usually manganese. The DXD motif is expected to play a carbohydrate binding role in sugar-nucleoside diphosphate and manganese dependent glycosyltransferases [].
Probab=70.75 E-value=2.3 Score=33.14 Aligned_cols=87 Identities=11% Similarity=0.093 Sum_probs=43.8
Q ss_pred HHHHHHHHhhCCCCcEEEEECCCCC-----HHHHHHHHHcCcEEEEeeeeCCCCchhhhhhhcccccccceecc-ccccc
Q 019647 43 VGLAKGLRKVKTAYPLVVAVLPDVP-----EEHRNILESQGCIVREIEPVYPPDNQTQYAMAYYVINYSKLRIW-EFVEY 116 (337)
Q Consensus 43 ~vll~SL~~~~~~~~lvilv~~~is-----~~~~~~L~~~~~~i~~V~~i~~~~~~~~~~~~~~~~~y~KL~i~-~L~~y 116 (337)
...+.|..+++|++.++++ +++.. ....+.|......+.+... ..........-..+-+.|+.+. ...+
T Consensus 5 ~~~i~s~~~~nP~~~~~~~-~d~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~sD~~R~~~L~~~GG- 79 (103)
T PF04488_consen 5 QCSIESWARHNPDYEYILW-TDESDNVRVKRIDIEFLFEKTPWFLELYN---KWEPGRYPNYAHKSDLLRYLVLYKYGG- 79 (103)
T ss_pred HHHHHHHHHHCCCCEEEEE-ECCCcchhhhHHHHHHHHhCChHHHHHHh---hhhcccccchHHHHHHHHHHHHHHcCc-
Confidence 4578889999999987754 55533 2223333332110000000 0000000000011235565443 3335
Q ss_pred ceeEEEecccccccCc-hhhhC
Q 019647 117 SKMIYLDGDIQVFENI-DHLFD 137 (337)
Q Consensus 117 drVLYLDaDilV~~di-deLf~ 137 (337)
||+|.|+++++++ +++..
T Consensus 80 ---iY~D~D~~~~rpl~~~~~~ 98 (103)
T PF04488_consen 80 ---IYLDLDVICLRPLDDPWLP 98 (103)
T ss_pred ---EEEeCccccCcchhhhhhc
Confidence 9999999999999 77654
No 43
>PRK11204 N-glycosyltransferase; Provisional
Probab=69.83 E-value=15 Score=35.98 Aligned_cols=98 Identities=15% Similarity=0.151 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHhh-CCCCcEEEEECCCCCHHHHHHHHHcCcEEEEeeeeCCCCchhhhhhhcccccccceecccccccce
Q 019647 40 KGVVGLAKGLRKV-KTAYPLVVAVLPDVPEEHRNILESQGCIVREIEPVYPPDNQTQYAMAYYVINYSKLRIWEFVEYSK 118 (337)
Q Consensus 40 ~~a~vll~SL~~~-~~~~~lvilv~~~is~~~~~~L~~~~~~i~~V~~i~~~~~~~~~~~~~~~~~y~KL~i~~L~~ydr 118 (337)
..+..++.|+.+. .+.++++ +++|+-+++..+.+++.......+..+...++.. ..... . ...+...+|-
T Consensus 67 ~~i~~~l~sl~~q~yp~~eii-VvdD~s~d~t~~~l~~~~~~~~~v~~i~~~~n~G-ka~al-----n--~g~~~a~~d~ 137 (420)
T PRK11204 67 ENVEETISHLLALRYPNYEVI-AINDGSSDNTGEILDRLAAQIPRLRVIHLAENQG-KANAL-----N--TGAAAARSEY 137 (420)
T ss_pred HHHHHHHHHHHhCCCCCeEEE-EEECCCCccHHHHHHHHHHhCCcEEEEEcCCCCC-HHHHH-----H--HHHHHcCCCE
Confidence 4456677887654 3455555 5566666555555544321111122222122211 11110 0 0111236899
Q ss_pred eEEEecccccccC-chhhhCC--CCCceeee
Q 019647 119 MIYLDGDIQVFEN-IDHLFDL--PDGYFYAV 146 (337)
Q Consensus 119 VLYLDaDilV~~d-ideLf~~--~~~~iaAv 146 (337)
++.+|+|.++-.| +.++.+. .+..+++|
T Consensus 138 i~~lDaD~~~~~d~L~~l~~~~~~~~~v~~v 168 (420)
T PRK11204 138 LVCIDGDALLDPDAAAYMVEHFLHNPRVGAV 168 (420)
T ss_pred EEEECCCCCCChhHHHHHHHHHHhCCCeEEE
Confidence 9999999998776 4444432 12335555
No 44
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=69.62 E-value=2.4 Score=34.40 Aligned_cols=86 Identities=17% Similarity=0.263 Sum_probs=45.0
Q ss_pred HHHHHHHHHHhh-CCCCcEEEEECCCCCHHHHHHHHHc---CcEEEEeeeeCCCCchhhhhhhcccccccceeccccccc
Q 019647 41 GVVGLAKGLRKV-KTAYPLVVAVLPDVPEEHRNILESQ---GCIVREIEPVYPPDNQTQYAMAYYVINYSKLRIWEFVEY 116 (337)
Q Consensus 41 ~a~vll~SL~~~-~~~~~lvilv~~~is~~~~~~L~~~---~~~i~~V~~i~~~~~~~~~~~~~~~~~y~KL~i~~L~~y 116 (337)
.+.-++.||++. .....++ ++.++-+++..+.+++. +..+. .+..+++. .+.. .+-...+....
T Consensus 12 ~l~~~l~sl~~q~~~~~eii-vvdd~s~d~~~~~~~~~~~~~~~i~---~i~~~~n~-g~~~-------~~n~~~~~a~~ 79 (169)
T PF00535_consen 12 YLERTLESLLKQTDPDFEII-VVDDGSTDETEEILEEYAESDPNIR---YIRNPENL-GFSA-------ARNRGIKHAKG 79 (169)
T ss_dssp THHHHHHHHHHHSGCEEEEE-EEECS-SSSHHHHHHHHHCCSTTEE---EEEHCCCS-HHHH-------HHHHHHHH--S
T ss_pred HHHHHHHHHhhccCCCEEEE-Eeccccccccccccccccccccccc---cccccccc-cccc-------cccccccccce
Confidence 344566666655 2344444 45555566666777664 22222 22212221 1111 22233334456
Q ss_pred ceeEEEecccccccC-chhhhCC
Q 019647 117 SKMIYLDGDIQVFEN-IDHLFDL 138 (337)
Q Consensus 117 drVLYLDaDilV~~d-ideLf~~ 138 (337)
+-|++||+|.++..+ |..|.+.
T Consensus 80 ~~i~~ld~D~~~~~~~l~~l~~~ 102 (169)
T PF00535_consen 80 EYILFLDDDDIISPDWLEELVEA 102 (169)
T ss_dssp SEEEEEETTEEE-TTHHHHHHHH
T ss_pred eEEEEeCCCceEcHHHHHHHHHH
Confidence 799999999999988 7777765
No 45
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=67.10 E-value=21 Score=34.65 Aligned_cols=22 Identities=18% Similarity=0.238 Sum_probs=17.2
Q ss_pred cceeEEEecccccccC-chhhhC
Q 019647 116 YSKMIYLDGDIQVFEN-IDHLFD 137 (337)
Q Consensus 116 ydrVLYLDaDilV~~d-ideLf~ 137 (337)
.|-++++|+|+.+-.+ +..+..
T Consensus 134 gd~llflDaD~~~~p~~l~~lv~ 156 (384)
T TIGR03469 134 ADYLLLTDADIAHGPDNLARLVA 156 (384)
T ss_pred CCEEEEECCCCCCChhHHHHHHH
Confidence 7999999999998655 455544
No 46
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=66.52 E-value=35 Score=29.78 Aligned_cols=94 Identities=13% Similarity=0.030 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHhhCCCCcEEEEECCCCCHHHHHHHHHc--CcEEEEeeeeCCCCchhhhhhhcccccccceeccccccc
Q 019647 39 VKGVVGLAKGLRKVKTAYPLVVAVLPDVPEEHRNILESQ--GCIVREIEPVYPPDNQTQYAMAYYVINYSKLRIWEFVEY 116 (337)
Q Consensus 39 l~~a~vll~SL~~~~~~~~lvilv~~~is~~~~~~L~~~--~~~i~~V~~i~~~~~~~~~~~~~~~~~y~KL~i~~L~~y 116 (337)
...+..++.|+.+.. ..+++ ++.++-+++..+.|+.. ...+. + +.. ++.. ... .+-...+....
T Consensus 13 ~~~l~~~l~sl~~q~-~~eii-vvdd~s~d~~~~~l~~~~~~~~~~-v--~~~-~~~g-~~~-------a~n~g~~~a~~ 78 (235)
T cd06434 13 PDVFRECLRSILRQK-PLEII-VVTDGDDEPYLSILSQTVKYGGIF-V--ITV-PHPG-KRR-------ALAEGIRHVTT 78 (235)
T ss_pred hHHHHHHHHHHHhCC-CCEEE-EEeCCCChHHHHHHHhhccCCcEE-E--Eec-CCCC-hHH-------HHHHHHHHhCC
Confidence 355677788887765 55555 45666666666665322 11111 1 111 1110 000 00011122368
Q ss_pred ceeEEEecccccccC-chhhhCC-CCCceeee
Q 019647 117 SKMIYLDGDIQVFEN-IDHLFDL-PDGYFYAV 146 (337)
Q Consensus 117 drVLYLDaDilV~~d-ideLf~~-~~~~iaAv 146 (337)
|-|++||+|+++..+ |..+... ....++++
T Consensus 79 d~v~~lD~D~~~~~~~l~~l~~~~~~~~v~~v 110 (235)
T cd06434 79 DIVVLLDSDTVWPPNALPEMLKPFEDPKVGGV 110 (235)
T ss_pred CEEEEECCCceeChhHHHHHHHhccCCCEeEE
Confidence 999999999999988 6666554 23335555
No 47
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=66.25 E-value=16 Score=29.47 Aligned_cols=87 Identities=15% Similarity=0.126 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHhhC-CCCcEEEEECCCCCHHHHHHHHHcCcEE-EEeeeeCCCCchhhhhhhcccccccceecccccccc
Q 019647 40 KGVVGLAKGLRKVK-TAYPLVVAVLPDVPEEHRNILESQGCIV-REIEPVYPPDNQTQYAMAYYVINYSKLRIWEFVEYS 117 (337)
Q Consensus 40 ~~a~vll~SL~~~~-~~~~lvilv~~~is~~~~~~L~~~~~~i-~~V~~i~~~~~~~~~~~~~~~~~y~KL~i~~L~~yd 117 (337)
..+..++.||++.. +..+++ ++.++-+++..+.+++..... ..+..+...++.. +.. .+-...+....+
T Consensus 10 ~~l~~~l~sl~~q~~~~~~ii-vvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~g-~~~-------~~n~~~~~~~~~ 80 (180)
T cd06423 10 AVIERTIESLLALDYPKLEVI-VVDDGSTDDTLEILEELAALYIRRVLVVRDKENGG-KAG-------ALNAGLRHAKGD 80 (180)
T ss_pred HHHHHHHHHHHhCCCCceEEE-EEeCCCccchHHHHHHHhccccceEEEEEecccCC-chH-------HHHHHHHhcCCC
Confidence 56777888888754 345555 456665665656665543211 0111111111110 111 111112223678
Q ss_pred eeEEEecccccccC-chhh
Q 019647 118 KMIYLDGDIQVFEN-IDHL 135 (337)
Q Consensus 118 rVLYLDaDilV~~d-ideL 135 (337)
-|+++|+|.++..+ |.++
T Consensus 81 ~i~~~D~D~~~~~~~l~~~ 99 (180)
T cd06423 81 IVVVLDADTILEPDALKRL 99 (180)
T ss_pred EEEEECCCCCcChHHHHHH
Confidence 99999999999877 4445
No 48
>KOG1950 consensus Glycosyl transferase, family 8 - glycogenin [Carbohydrate transport and metabolism]
Probab=66.08 E-value=3.1 Score=40.43 Aligned_cols=35 Identities=37% Similarity=0.648 Sum_probs=31.8
Q ss_pred ccccceecccccccceeEEEecccccccCchhhhC
Q 019647 103 INYSKLRIWEFVEYSKMIYLDGDIQVFENIDHLFD 137 (337)
Q Consensus 103 ~~y~KL~i~~L~~ydrVLYLDaDilV~~dideLf~ 137 (337)
..+.+++.+.+..+++.+.+|+|..++.+.+.+|.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~f~ 185 (369)
T KOG1950|consen 151 LNYAKLYMFQLDFYSKLVKIDADDCILKNDDLLFS 185 (369)
T ss_pred hcccccceeeecccccceEEeccchhcCChhhhhh
Confidence 46788999999999999999999999999999998
No 49
>PF01793 Glyco_transf_15: Glycolipid 2-alpha-mannosyltransferase; InterPro: IPR002685 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This entry represents a family of fungi mannosyl-transferases involved in N-linked and O-linked glycosylation of proteins. They belong to the glycosyltransferase family 15 (GT15 from CAZY). Some of the enzymes in this family have been shown to be involved in O- and N-linked glycan modifications in the Golgi [].; GO: 0000030 mannosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane; PDB: 1S4P_A 1S4O_A 1S4N_A.
Probab=65.54 E-value=13 Score=35.50 Aligned_cols=128 Identities=19% Similarity=0.244 Sum_probs=52.8
Q ss_pred cccCCCCCCCCCCCCCCeEEEEEEeeCCCcHHHHHHHHHHHHhh-CC--CCcEEEEECCCCCHHHHHHHHHc-CcE--EE
Q 019647 9 TAVKPAGLGAKPASLPGRAYVTFLAGNGDYVKGVVGLAKGLRKV-KT--AYPLVVAVLPDVPEEHRNILESQ-GCI--VR 82 (337)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~AyvT~l~~d~~Yl~~a~vll~SL~~~-~~--~~~lvilv~~~is~~~~~~L~~~-~~~--i~ 82 (337)
..|.+.+......++.+-|+|+ |+-|. =+.+++-+++||-.+ |. .||.|+|-...++++-++.+++. ... +.
T Consensus 40 ~~~~~~~~~~~~~~r~~Aafv~-LvrN~-dL~~~l~SI~~lE~rFN~kf~YpwvFlnd~pFteeFk~~i~~~~~~~v~F~ 117 (328)
T PF01793_consen 40 EGCQDPKSDANNYPRENAAFVM-LVRNS-DLEGLLSSIRSLEDRFNKKFNYPWVFLNDEPFTEEFKEAISNATSGKVEFG 117 (328)
T ss_dssp ---H--------HS---EEEEE-E--GG-GHHHHHHHHHHHHHHTTTTS---EEEEESS---HHHHHHHHHH-SS-EEEE
T ss_pred ccccccccccccCCCCceEEEE-EEEch-hHHHHHHHHHHHHHHccCCCCCCEEEEeCCCCCHHHHHHHHHhhcCceEEE
Confidence 3444444445556789999998 55554 499999999999643 43 68888777667999888777653 222 22
Q ss_pred Eeeee--CCCCc--hh-------hhhh---hc-ccc---cccce------ecccccccceeEEEecccccccCch-hhhC
Q 019647 83 EIEPV--YPPDN--QT-------QYAM---AY-YVI---NYSKL------RIWEFVEYSKMIYLDGDIQVFENID-HLFD 137 (337)
Q Consensus 83 ~V~~i--~~~~~--~~-------~~~~---~~-~~~---~y~KL------~i~~L~~ydrVLYLDaDilV~~did-eLf~ 137 (337)
.|..- ..|+. .. .+.. .+ ... ...|+ ..+.|.+||=.-=++.|+-+..||+ ++|.
T Consensus 118 ~Ip~e~W~~P~~ID~~~a~~~~~~~~~~~v~yg~s~sYr~McRf~SG~F~~hp~l~~ydyyWRvEP~v~~~Cdi~YD~F~ 197 (328)
T PF01793_consen 118 LIPKEHWSYPDWIDQEKAAESREKMAEEGVPYGDSESYRHMCRFYSGFFYRHPLLQDYDYYWRVEPDVKFYCDIDYDPFR 197 (328)
T ss_dssp E--GGGSS--TTS-HHHHHHHHHHHTT-TSTTTT-HHHHHHHHHHHHTGGGSGGGTT-SEEEE--TT-EE-S---S-HHH
T ss_pred EeCHHHcCCCCcCCHHHHHHHHHHHHhcCCCCCCchhHHHHHHHHHHhhhcChhhcCccEEEEeCCCceeecCCCCCHHH
Confidence 22211 11211 00 1110 00 000 11222 1233458999999999999999998 6675
Q ss_pred C
Q 019647 138 L 138 (337)
Q Consensus 138 ~ 138 (337)
.
T Consensus 198 ~ 198 (328)
T PF01793_consen 198 F 198 (328)
T ss_dssp H
T ss_pred H
Confidence 4
No 50
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=64.49 E-value=37 Score=30.11 Aligned_cols=89 Identities=12% Similarity=0.084 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHhhC-CC--CcEEEEECCCCCHHHHHHHHHcCc-EEEEeeeeCCCCchhhhhhhcccccccceeccccc
Q 019647 39 VKGVVGLAKGLRKVK-TA--YPLVVAVLPDVPEEHRNILESQGC-IVREIEPVYPPDNQTQYAMAYYVINYSKLRIWEFV 114 (337)
Q Consensus 39 l~~a~vll~SL~~~~-~~--~~lvilv~~~is~~~~~~L~~~~~-~i~~V~~i~~~~~~~~~~~~~~~~~y~KL~i~~L~ 114 (337)
-..+.-++.||.... +. ++++ ++.++-+++..+.+++... ....+..+...++.. .... .. ...+..
T Consensus 13 ~~~l~~~l~sl~~~~y~~~~~eii-vVdd~s~d~t~~i~~~~~~~~~~~i~~~~~~~~~G-~~~a-----~n--~g~~~a 83 (241)
T cd06427 13 AEVLPQLIASLSALDYPRSKLDVK-LLLEEDDEETIAAARALRLPSIFRVVVVPPSQPRT-KPKA-----CN--YALAFA 83 (241)
T ss_pred HHHHHHHHHHHHhCcCCcccEEEE-EEECCCCchHHHHHHHhccCCCeeEEEecCCCCCc-hHHH-----HH--HHHHhc
Confidence 355677888887632 22 3344 4456666777777776532 111222222212110 1110 00 112223
Q ss_pred ccceeEEEecccccccC-chhhh
Q 019647 115 EYSKMIYLDGDIQVFEN-IDHLF 136 (337)
Q Consensus 115 ~ydrVLYLDaDilV~~d-ideLf 136 (337)
..|=|+++|+|+++-.+ +.++.
T Consensus 84 ~gd~i~~~DaD~~~~~~~l~~~~ 106 (241)
T cd06427 84 RGEYVVIYDAEDAPDPDQLKKAV 106 (241)
T ss_pred CCCEEEEEcCCCCCChHHHHHHH
Confidence 56889999999998765 33443
No 51
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=63.23 E-value=12 Score=32.10 Aligned_cols=87 Identities=9% Similarity=0.082 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHhh-CCCCcEEEEECCCCCHHHHHHHHHcCcEE--EEeeeeCCCCchhhhhhhcccccccceecccccc
Q 019647 39 VKGVVGLAKGLRKV-KTAYPLVVAVLPDVPEEHRNILESQGCIV--REIEPVYPPDNQTQYAMAYYVINYSKLRIWEFVE 115 (337)
Q Consensus 39 l~~a~vll~SL~~~-~~~~~lvilv~~~is~~~~~~L~~~~~~i--~~V~~i~~~~~~~~~~~~~~~~~y~KL~i~~L~~ 115 (337)
-..+..++.||.+. .+.++++| +.++-+++..+.+++..... ..+..+....+....... ...-...+...
T Consensus 13 ~~~l~~~L~sl~~q~~~~~eiiv-Vdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-----~~~n~g~~~a~ 86 (196)
T cd02520 13 DPNLYENLESFFQQDYPKYEILF-CVQDEDDPAIPVVRKLIAKYPNVDARLLIGGEKVGINPKV-----NNLIKGYEEAR 86 (196)
T ss_pred CccHHHHHHHHHhccCCCeEEEE-EeCCCcchHHHHHHHHHHHCCCCcEEEEecCCcCCCCHhH-----HHHHHHHHhCC
Confidence 33456778888754 34566654 55655555555555431110 011111111110000000 00001122245
Q ss_pred cceeEEEecccccccC
Q 019647 116 YSKMIYLDGDIQVFEN 131 (337)
Q Consensus 116 ydrVLYLDaDilV~~d 131 (337)
.|=++++|+|+++-.+
T Consensus 87 ~d~i~~~D~D~~~~~~ 102 (196)
T cd02520 87 YDILVISDSDISVPPD 102 (196)
T ss_pred CCEEEEECCCceEChh
Confidence 7999999999987544
No 52
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=59.96 E-value=19 Score=33.30 Aligned_cols=24 Identities=25% Similarity=0.422 Sum_probs=19.0
Q ss_pred cccceeEEEecccccccC-chhhhC
Q 019647 114 VEYSKMIYLDGDIQVFEN-IDHLFD 137 (337)
Q Consensus 114 ~~ydrVLYLDaDilV~~d-ideLf~ 137 (337)
..-|-|+++|+|+++-.+ |..+..
T Consensus 87 A~~d~l~flD~D~i~~~~~i~~~~~ 111 (281)
T PF10111_consen 87 ARGDYLIFLDADCIPSPDFIEKLLN 111 (281)
T ss_pred cCCCEEEEEcCCeeeCHHHHHHHHH
Confidence 367899999999999876 555555
No 53
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=59.55 E-value=61 Score=28.37 Aligned_cols=18 Identities=11% Similarity=0.058 Sum_probs=15.6
Q ss_pred cccceeEEEecccccccC
Q 019647 114 VEYSKMIYLDGDIQVFEN 131 (337)
Q Consensus 114 ~~ydrVLYLDaDilV~~d 131 (337)
..+|=|+++|+|+++-.+
T Consensus 86 a~~~~i~~~DaD~~~~~~ 103 (232)
T cd06437 86 AKGEYVAIFDADFVPPPD 103 (232)
T ss_pred CCCCEEEEEcCCCCCChH
Confidence 368999999999998766
No 54
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=58.97 E-value=49 Score=28.70 Aligned_cols=83 Identities=12% Similarity=0.003 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHhhC-CC--CcEEEEECCCCCHHHHHHHHHcCcEEEEeeeeCCCCchhhhhhhcccccccceeccccccc
Q 019647 40 KGVVGLAKGLRKVK-TA--YPLVVAVLPDVPEEHRNILESQGCIVREIEPVYPPDNQTQYAMAYYVINYSKLRIWEFVEY 116 (337)
Q Consensus 40 ~~a~vll~SL~~~~-~~--~~lvilv~~~is~~~~~~L~~~~~~i~~V~~i~~~~~~~~~~~~~~~~~y~KL~i~~L~~y 116 (337)
..+..++.||.... +. +.++ +++++-+++..+.+++.+... .+..+..+.+.. ... -..-...+....
T Consensus 15 ~~l~~~l~sl~~q~~~~~~~eii-vvdd~s~d~t~~~~~~~~~~~-~~~~~~~~~~~~-~~~------~~~n~~~~~a~~ 85 (234)
T cd06421 15 EIVRKTLRAALAIDYPHDKLRVY-VLDDGRRPELRALAAELGVEY-GYRYLTRPDNRH-AKA------GNLNNALAHTTG 85 (234)
T ss_pred HHHHHHHHHHHhcCCCcccEEEE-EEcCCCchhHHHHHHHhhccc-CceEEEeCCCCC-CcH------HHHHHHHHhCCC
Confidence 34567888887542 33 4444 566776677777777665421 111111111110 000 000111222368
Q ss_pred ceeEEEecccccccC
Q 019647 117 SKMIYLDGDIQVFEN 131 (337)
Q Consensus 117 drVLYLDaDilV~~d 131 (337)
|-|++||+|.++-.+
T Consensus 86 d~i~~lD~D~~~~~~ 100 (234)
T cd06421 86 DFVAILDADHVPTPD 100 (234)
T ss_pred CEEEEEccccCcCcc
Confidence 999999999999765
No 55
>PF03414 Glyco_transf_6: Glycosyltransferase family 6; InterPro: IPR005076 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 6 GT6 from CAZY comprises enzymes with three known activities; alpha-1,3-galactosyltransferase (2.4.1.151 from EC); alpha-1,3 N-acetylgalactosaminyltransferase (2.4.1.40 from EC); alpha-galactosyltransferase (2.4.1.37 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0016020 membrane; PDB: 2Y7A_B 2O1G_A 1R82_A 2RJ1_A 3IOJ_B 2RJ4_A 3I0C_A 3SX8_A 1ZJ1_A 3I0E_A ....
Probab=58.90 E-value=1.3e+02 Score=28.96 Aligned_cols=190 Identities=12% Similarity=0.183 Sum_probs=83.7
Q ss_pred EeeCCCcHHHHHHHHHHHHhh-CCCCcE-EEEECCCCCHHHHHHHHHcCcEEEEeeeeCCCCchhhhhhhccccccccee
Q 019647 32 LAGNGDYVKGVVGLAKGLRKV-KTAYPL-VVAVLPDVPEEHRNILESQGCIVREIEPVYPPDNQTQYAMAYYVINYSKLR 109 (337)
Q Consensus 32 l~~d~~Yl~~a~vll~SL~~~-~~~~~l-vilv~~~is~~~~~~L~~~~~~i~~V~~i~~~~~~~~~~~~~~~~~y~KL~ 109 (337)
+|+ .+|+....-.+.|-.++ -+.+++ +++.||+.+.--.-.|.. +-++ .|-.+ .+. .+|...+..|+.
T Consensus 106 fA~-GkY~~fl~~Fl~SAek~Fm~g~~V~YYVFTD~p~~vP~i~l~~-~r~~-~V~~v--~~~-----~~Wqd~sm~Rm~ 175 (337)
T PF03414_consen 106 FAT-GKYIVFLKDFLESAEKHFMVGHRVIYYVFTDQPSKVPRIELGP-GRRL-KVFEV--QEE-----KRWQDISMMRME 175 (337)
T ss_dssp EE--CCHHHHHHHHHHHHHHHBSTTSEEEEEEEES-GGGS------T-TEEE-EEEE---SGG-----SSHHHHHHHHHH
T ss_pred Eec-ccHHHHHHHHHHhHHHhccCCcEEEEEEEeCchhhCCccccCC-Ccee-EEEEe--ccc-----CCCccchhHHHH
Confidence 443 68999999999999877 345664 345676532210001111 1122 12222 110 112223444443
Q ss_pred ccc------c-cccceeEEEecccccccCch-hhhCCCCCceeeeechhccCCCCCCCcccccccccCCCCCCC-CcccC
Q 019647 110 IWE------F-VEYSKMIYLDGDIQVFENID-HLFDLPDGYFYAVMDCFCEKTWSKTPQYKIGYCQQCPDRVRW-PAEMG 180 (337)
Q Consensus 110 i~~------L-~~ydrVLYLDaDilV~~did-eLf~~~~~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~-p~~~g 180 (337)
+.. + -++|-+..+|+|+++.+++. |.+ +..+|...--.. ..+..+|..+. .|....+ |...
T Consensus 176 ~i~~~i~~~~~~EvDYLFc~dvd~~F~~~vGvE~L---g~lva~LHp~~y---~~~~~~FpYER---rp~S~AyIp~~e- 245 (337)
T PF03414_consen 176 MISEHIEQHIQHEVDYLFCMDVDMVFQDHVGVEIL---GDLVATLHPWFY---FKPRESFPYER---RPKSQAYIPYGE- 245 (337)
T ss_dssp HHHHHHHHCHHHH-SEEEEEESSEEE-S-B-GGG----SSEEEEESTTTT---TSTGGGS--B----STTSTTB--TT--
T ss_pred HHHHHHHHHHhhcCCEEEEEecceEEecccCHHHH---HHHHHHhCHHHH---CCChhhCcccc---CccccccccCCC-
Confidence 332 2 36899999999999998877 333 222332211000 00001111110 0100000 1112
Q ss_pred CCCCccccceeEEEecCH------HHHHHHHHHHhcCCCCCCCChHHHHHHhc--CceeeccCcccccchh
Q 019647 181 EPPALYFNAGMFVFEPSI------STYHDLLETVKVTPPTTFAEQDFLNMYFK--HIYKPIPLVYNLVLAM 243 (337)
Q Consensus 181 ~~~~~yfNsGVmlin~~~------~~~~~l~~~~~~~~~~~~~DQdiLN~~f~--~~~~~L~~~yN~~~~~ 243 (337)
.+-|+-+|++-=.+.. .-.+.+++-.++.-.-.+.|..-||.+|- ...+.|+++|+.....
T Consensus 246 --GDfYY~ga~fGGt~~~vl~Lt~~c~~~i~~D~~n~I~A~WhDESHLNKYfl~~KPtKvLSPEY~Wd~~~ 314 (337)
T PF03414_consen 246 --GDFYYHGAFFGGTVEEVLRLTEACHQGIMQDKANGIEALWHDESHLNKYFLYHKPTKVLSPEYCWDERF 314 (337)
T ss_dssp ---S--EECCEEEECHHHHHHHHHHHHHHHHHHHHTT---TTCHHHHHHHHHHHS--SEEE-GGGSBSHHH
T ss_pred --CCeEEeceecCCcHHHHHHHHHHHHHHHHhhhhcCceEeccchhhhHHHHhhCCCceecCHHHccCccC
Confidence 2467777777655443 11222322233322346799999999884 3468999999887543
No 56
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=57.72 E-value=52 Score=27.42 Aligned_cols=86 Identities=3% Similarity=-0.036 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHhh-CCCCcEEEEECCCCCHHHHHHHHHcCcEEEEeeeeCCCCchhhhhhhcccccccceecccccccc
Q 019647 39 VKGVVGLAKGLRKV-KTAYPLVVAVLPDVPEEHRNILESQGCIVREIEPVYPPDNQTQYAMAYYVINYSKLRIWEFVEYS 117 (337)
Q Consensus 39 l~~a~vll~SL~~~-~~~~~lvilv~~~is~~~~~~L~~~~~~i~~V~~i~~~~~~~~~~~~~~~~~y~KL~i~~L~~yd 117 (337)
...+..++.||.+. .+...++ ++.++-+++..+.+++....++.+.. .++.. ... .+-...+....|
T Consensus 10 ~~~l~~~l~sl~~q~~~~~evi-vvDd~s~d~~~~~~~~~~~~~~~~~~---~~~~g-~~~-------a~n~~~~~a~~~ 77 (202)
T cd06433 10 AETLEETIDSVLSQTYPNIEYI-VIDGGSTDGTVDIIKKYEDKITYWIS---EPDKG-IYD-------AMNKGIALATGD 77 (202)
T ss_pred HHHHHHHHHHHHhCCCCCceEE-EEeCCCCccHHHHHHHhHhhcEEEEe---cCCcC-HHH-------HHHHHHHHcCCC
Confidence 35667788888754 3344444 45665556666666665433221211 11111 111 111122223568
Q ss_pred eeEEEecccccccC-chhhh
Q 019647 118 KMIYLDGDIQVFEN-IDHLF 136 (337)
Q Consensus 118 rVLYLDaDilV~~d-ideLf 136 (337)
-|++||+|.++..+ +..+.
T Consensus 78 ~v~~ld~D~~~~~~~~~~~~ 97 (202)
T cd06433 78 IIGFLNSDDTLLPGALLAVV 97 (202)
T ss_pred EEEEeCCCcccCchHHHHHH
Confidence 89999999988766 55554
No 57
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=57.14 E-value=40 Score=28.59 Aligned_cols=82 Identities=12% Similarity=0.041 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHhhC-CCCcEEEEECCCC-CHHHHHHHHHcCcEEEEeeeeCCCCchhhhhhhcccccccceecccccccc
Q 019647 40 KGVVGLAKGLRKVK-TAYPLVVAVLPDV-PEEHRNILESQGCIVREIEPVYPPDNQTQYAMAYYVINYSKLRIWEFVEYS 117 (337)
Q Consensus 40 ~~a~vll~SL~~~~-~~~~lvilv~~~i-s~~~~~~L~~~~~~i~~V~~i~~~~~~~~~~~~~~~~~y~KL~i~~L~~yd 117 (337)
..+.-++.||.... +...++ ++.++- ++...+.++....... +..+..+++. .... .+-......+.|
T Consensus 13 ~~l~~~l~Sl~~q~~~~~eii-ivdd~ss~d~t~~~~~~~~~~~~-i~~i~~~~n~-G~~~-------a~N~g~~~a~gd 82 (201)
T cd04195 13 EFLREALESILKQTLPPDEVV-LVKDGPVTQSLNEVLEEFKRKLP-LKVVPLEKNR-GLGK-------ALNEGLKHCTYD 82 (201)
T ss_pred HHHHHHHHHHHhcCCCCcEEE-EEECCCCchhHHHHHHHHHhcCC-eEEEEcCccc-cHHH-------HHHHHHHhcCCC
Confidence 45667888887643 334454 455554 4444444443211110 2222222221 1111 111222234578
Q ss_pred eeEEEecccccccC
Q 019647 118 KMIYLDGDIQVFEN 131 (337)
Q Consensus 118 rVLYLDaDilV~~d 131 (337)
=|++||+|.++..+
T Consensus 83 ~i~~lD~Dd~~~~~ 96 (201)
T cd04195 83 WVARMDTDDISLPD 96 (201)
T ss_pred EEEEeCCccccCcH
Confidence 89999999988765
No 58
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=55.96 E-value=40 Score=28.68 Aligned_cols=91 Identities=14% Similarity=0.132 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHhh-CCCCcEEEEECCCCCHHHHHHHHHcCcEEEEeeeeCCCCchhhhhhhcccccccceecccccccce
Q 019647 40 KGVVGLAKGLRKV-KTAYPLVVAVLPDVPEEHRNILESQGCIVREIEPVYPPDNQTQYAMAYYVINYSKLRIWEFVEYSK 118 (337)
Q Consensus 40 ~~a~vll~SL~~~-~~~~~lvilv~~~is~~~~~~L~~~~~~i~~V~~i~~~~~~~~~~~~~~~~~y~KL~i~~L~~ydr 118 (337)
..+.-++.||.+. .+..+++ +++++-++...+.+++.+.... +..+..+++.. .+.... ..+ +... ..++|-
T Consensus 10 ~~l~~~l~sl~~q~~~~~eii-ivD~~s~d~t~~~~~~~~~~~~-i~~~~~~~n~g-~~~~~n-~~~-~~a~--~~~~d~ 82 (202)
T cd04185 10 DLLKECLDALLAQTRPPDHII-VIDNASTDGTAEWLTSLGDLDN-IVYLRLPENLG-GAGGFY-EGV-RRAY--ELGYDW 82 (202)
T ss_pred HHHHHHHHHHHhccCCCceEE-EEECCCCcchHHHHHHhcCCCc-eEEEECccccc-hhhHHH-HHH-HHHh--ccCCCE
Confidence 4466778888754 3344544 5666666666677776543321 22332233211 111000 001 1111 236899
Q ss_pred eEEEecccccccC-chhhhC
Q 019647 119 MIYLDGDIQVFEN-IDHLFD 137 (337)
Q Consensus 119 VLYLDaDilV~~d-ideLf~ 137 (337)
+++||+|.++..+ +++|.+
T Consensus 83 v~~ld~D~~~~~~~l~~l~~ 102 (202)
T cd04185 83 IWLMDDDAIPDPDALEKLLA 102 (202)
T ss_pred EEEeCCCCCcChHHHHHHHH
Confidence 9999999999765 333433
No 59
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=55.46 E-value=43 Score=28.83 Aligned_cols=83 Identities=14% Similarity=0.148 Sum_probs=44.6
Q ss_pred CcHHHHHHHHHHHHhhC-CCCcEEEEECCCCCHHHHHHHHHcCcEEEEeeeeCCCCchhhhhhhcccccccceecccccc
Q 019647 37 DYVKGVVGLAKGLRKVK-TAYPLVVAVLPDVPEEHRNILESQGCIVREIEPVYPPDNQTQYAMAYYVINYSKLRIWEFVE 115 (337)
Q Consensus 37 ~Yl~~a~vll~SL~~~~-~~~~lvilv~~~is~~~~~~L~~~~~~i~~V~~i~~~~~~~~~~~~~~~~~y~KL~i~~L~~ 115 (337)
+--..+..++.||.... +...++ ++.++-+++..+.+++.+..+. ..+.. .+.. +-...+...
T Consensus 9 n~~~~l~~~l~sl~~q~~~~~evi-vvdd~s~d~~~~~~~~~~~~~~-----~~~~g---~~~a-------~n~g~~~a~ 72 (221)
T cd02522 9 NEAENLPRLLASLRRLNPLPLEII-VVDGGSTDGTVAIARSAGVVVI-----SSPKG---RARQ-------MNAGAAAAR 72 (221)
T ss_pred CcHHHHHHHHHHHHhccCCCcEEE-EEeCCCCccHHHHHhcCCeEEE-----eCCcC---HHHH-------HHHHHHhcc
Confidence 33445677888887653 344554 4566666666666666332221 11111 1111 111112224
Q ss_pred cceeEEEecccccccC-chhh
Q 019647 116 YSKMIYLDGDIQVFEN-IDHL 135 (337)
Q Consensus 116 ydrVLYLDaDilV~~d-ideL 135 (337)
.+-|+++|+|..+..+ +..|
T Consensus 73 ~~~i~~~D~D~~~~~~~l~~l 93 (221)
T cd02522 73 GDWLLFLHADTRLPPDWDAAI 93 (221)
T ss_pred CCEEEEEcCCCCCChhHHHHH
Confidence 6899999999998765 3343
No 60
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=53.90 E-value=65 Score=30.97 Aligned_cols=100 Identities=17% Similarity=0.219 Sum_probs=49.7
Q ss_pred CcHHHHHHHHHHHHhhCC---CCcEEEEECCCCCHHHHHHHHHcCcEEEEeeeeCCCC-chh---hhhhhcccccccce-
Q 019647 37 DYVKGVVGLAKGLRKVKT---AYPLVVAVLPDVPEEHRNILESQGCIVREIEPVYPPD-NQT---QYAMAYYVINYSKL- 108 (337)
Q Consensus 37 ~Yl~~a~vll~SL~~~~~---~~~lvilv~~~is~~~~~~L~~~~~~i~~V~~i~~~~-~~~---~~~~~~~~~~y~KL- 108 (337)
|....+.-++.||++..| ..+++ +..|+-.++..+.++..+..+..+....... +.. .+......+.-+|.
T Consensus 10 NRp~~l~r~LesLl~~~p~~~~~~li-Is~DG~~~~~~~~v~~~~~~i~~i~~~~~~~~~~~~~~~~~~y~~ia~hyk~a 88 (334)
T cd02514 10 NRPDYLRRMLDSLLSYRPSAEKFPII-VSQDGGYEEVADVAKSFGDGVTHIQHPPISIKNVNPPHKFQGYYRIARHYKWA 88 (334)
T ss_pred CCHHHHHHHHHHHHhccccCCCceEE-EEeCCCchHHHHHHHhhccccEEEEcccccccccCcccccchhhHHHHHHHHH
Confidence 456677788888887642 34455 4456655555566655532222222211111 000 00000000010111
Q ss_pred --ecccccccceeEEEecccccccCchhhhC
Q 019647 109 --RIWEFVEYSKMIYLDGDIQVFENIDHLFD 137 (337)
Q Consensus 109 --~i~~L~~ydrVLYLDaDilV~~dideLf~ 137 (337)
.+++...+++||.||.|+++-.|.=+.|+
T Consensus 89 ln~vF~~~~~~~vIILEDDl~~sPdFf~yf~ 119 (334)
T cd02514 89 LTQTFNLFGYSFVIILEDDLDIAPDFFSYFQ 119 (334)
T ss_pred HHHHHHhcCCCEEEEECCCCccCHhHHHHHH
Confidence 12222369999999999999988554444
No 61
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=53.34 E-value=29 Score=32.05 Aligned_cols=87 Identities=8% Similarity=0.025 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHhhCCC---CcEEEEECCCCCHHHHHHHHH-----cCcEEEEeeeeCCCCchhhhhhhcccccccceecc
Q 019647 40 KGVVGLAKGLRKVKTA---YPLVVAVLPDVPEEHRNILES-----QGCIVREIEPVYPPDNQTQYAMAYYVINYSKLRIW 111 (337)
Q Consensus 40 ~~a~vll~SL~~~~~~---~~lvilv~~~is~~~~~~L~~-----~~~~i~~V~~i~~~~~~~~~~~~~~~~~y~KL~i~ 111 (337)
..+..++.||....+. +.+ |+++++-++.....+.+ .... |..+..+.+. .+... +=...
T Consensus 12 ~~l~~~l~Sl~~~~~~~~~~EI-IvVDd~S~d~t~~~~~~~~~~~~~~~---v~vi~~~~n~-G~~~a-------~N~g~ 79 (299)
T cd02510 12 STLLRTVHSVINRTPPELLKEI-ILVDDFSDKPELKLLLEEYYKKYLPK---VKVLRLKKRE-GLIRA-------RIAGA 79 (299)
T ss_pred HHHHHHHHHHHhcCchhcCCEE-EEEECCCCchHHHHHHHHHHhhcCCc---EEEEEcCCCC-CHHHH-------HHHHH
Confidence 6777889999865432 244 45666655555444422 1112 2223222221 11111 00111
Q ss_pred cccccceeEEEecccccccC-chhhhCC
Q 019647 112 EFVEYSKMIYLDGDIQVFEN-IDHLFDL 138 (337)
Q Consensus 112 ~L~~ydrVLYLDaDilV~~d-ideLf~~ 138 (337)
+....|-|++||+|+++..+ |..|.+.
T Consensus 80 ~~A~gd~i~fLD~D~~~~~~wL~~ll~~ 107 (299)
T cd02510 80 RAATGDVLVFLDSHCEVNVGWLEPLLAR 107 (299)
T ss_pred HHccCCEEEEEeCCcccCccHHHHHHHH
Confidence 12346899999999999665 5666653
No 62
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=52.60 E-value=23 Score=34.19 Aligned_cols=22 Identities=18% Similarity=0.306 Sum_probs=17.3
Q ss_pred cccceeEEEecccccccC-chhh
Q 019647 114 VEYSKMIYLDGDIQVFEN-IDHL 135 (337)
Q Consensus 114 ~~ydrVLYLDaDilV~~d-ideL 135 (337)
..+|-++++|+|+++-.+ |..+
T Consensus 125 a~ge~i~~~DaD~~~~p~~L~~l 147 (373)
T TIGR03472 125 ARHDILVIADSDISVGPDYLRQV 147 (373)
T ss_pred ccCCEEEEECCCCCcChhHHHHH
Confidence 468999999999999766 4444
No 63
>PRK10063 putative glycosyl transferase; Provisional
Probab=51.43 E-value=96 Score=28.05 Aligned_cols=83 Identities=17% Similarity=0.235 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHhh----CCCCcEEEEECCCCCHHHHHHHHHcCcEEEEeeeeCCCCchhhhhhhcccccccceeccccc
Q 019647 39 VKGVVGLAKGLRKV----KTAYPLVVAVLPDVPEEHRNILESQGCIVREIEPVYPPDNQTQYAMAYYVINYSKLRIWEFV 114 (337)
Q Consensus 39 l~~a~vll~SL~~~----~~~~~lvilv~~~is~~~~~~L~~~~~~i~~V~~i~~~~~~~~~~~~~~~~~y~KL~i~~L~ 114 (337)
...+.-++.||... ..+.+++ +++++-++...+.+++..... .+..+..+. . .+..+. . ...+..
T Consensus 13 ~~~l~~~l~sl~~~~~~~~~~~EiI-VvDdgStD~t~~i~~~~~~~~-~i~~i~~~~-~-G~~~A~-----N--~Gi~~a 81 (248)
T PRK10063 13 LEGIVKTHASLRHLAQDPGISFEWI-VVDGGSNDGTREFLENLNGIF-NLRFVSEPD-N-GIYDAM-----N--KGIAMA 81 (248)
T ss_pred HHHHHHHHHHHHHHHhCCCCCEEEE-EEECcCcccHHHHHHHhcccC-CEEEEECCC-C-CHHHHH-----H--HHHHHc
Confidence 44555666666532 2334444 566666777777777753211 122222221 1 111110 0 011122
Q ss_pred ccceeEEEecccccccCc
Q 019647 115 EYSKMIYLDGDIQVFENI 132 (337)
Q Consensus 115 ~ydrVLYLDaDilV~~di 132 (337)
..|-|++||+|-++..+.
T Consensus 82 ~g~~v~~ld~DD~~~~~~ 99 (248)
T PRK10063 82 QGRFALFLNSGDIFHQDA 99 (248)
T ss_pred CCCEEEEEeCCcccCcCH
Confidence 468999999998887764
No 64
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=51.21 E-value=38 Score=29.21 Aligned_cols=24 Identities=17% Similarity=0.112 Sum_probs=18.1
Q ss_pred cccceeEEEecccccccC-chhhhC
Q 019647 114 VEYSKMIYLDGDIQVFEN-IDHLFD 137 (337)
Q Consensus 114 ~~ydrVLYLDaDilV~~d-ideLf~ 137 (337)
...|-|+++|+|.++..+ |..+..
T Consensus 81 ~~~d~i~~~D~D~~~~~~~l~~l~~ 105 (229)
T cd04192 81 AKGDWIVTTDADCVVPSNWLLTFVA 105 (229)
T ss_pred hcCCEEEEECCCcccCHHHHHHHHH
Confidence 457999999999998765 444444
No 65
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=50.60 E-value=62 Score=26.18 Aligned_cols=88 Identities=11% Similarity=0.072 Sum_probs=45.3
Q ss_pred CCCcHHHHHHHHHHHHhhCC-CCcEEEEECCCCCHHHHHHHHHcCcEEEEeeeeCCCCchhhhhhhcccccccceecccc
Q 019647 35 NGDYVKGVVGLAKGLRKVKT-AYPLVVAVLPDVPEEHRNILESQGCIVREIEPVYPPDNQTQYAMAYYVINYSKLRIWEF 113 (337)
Q Consensus 35 d~~Yl~~a~vll~SL~~~~~-~~~lvilv~~~is~~~~~~L~~~~~~i~~V~~i~~~~~~~~~~~~~~~~~y~KL~i~~L 113 (337)
-.|.-..+..++.|+.+... ... +++++++-++...+.++........+.......+.. ..+.+-.....
T Consensus 11 ~~n~~~~l~~~l~s~~~q~~~~~e-iivvddgs~d~t~~~~~~~~~~~~~~~~~~~~~~~g--------~~~~~~~~~~~ 81 (291)
T COG0463 11 TYNEEEYLPEALESLLNQTYKDFE-IIVVDDGSTDGTTEIAIEYGAKDVRVIRLINERNGG--------LGAARNAGLEY 81 (291)
T ss_pred ccchhhhHHHHHHHHHhhhhcceE-EEEEeCCCCCChHHHHHHHhhhcceEEEeecccCCC--------hHHHHHhhHHh
Confidence 34455778888999876533 345 556777766666566555443221111111111110 01122222222
Q ss_pred cccceeEEEecccccccCc
Q 019647 114 VEYSKMIYLDGDIQVFENI 132 (337)
Q Consensus 114 ~~ydrVLYLDaDilV~~di 132 (337)
..-+-|+++|+|.+ ..+-
T Consensus 82 ~~~~~~~~~d~d~~-~~~~ 99 (291)
T COG0463 82 ARGDYIVFLDADDQ-HPPE 99 (291)
T ss_pred ccCCEEEEEccCCC-CCHH
Confidence 22289999999999 6553
No 66
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A.
Probab=50.35 E-value=41 Score=33.48 Aligned_cols=111 Identities=22% Similarity=0.312 Sum_probs=49.1
Q ss_pred CCeEEEEEEeeC-CCcHHHHHHHHHHHHhhC---CCCcEEEEECCCCCHHHHHHHHHcCcEEEEeeeeCC-----CCchh
Q 019647 24 PGRAYVTFLAGN-GDYVKGVVGLAKGLRKVK---TAYPLVVAVLPDVPEEHRNILESQGCIVREIEPVYP-----PDNQT 94 (337)
Q Consensus 24 ~~~AyvT~l~~d-~~Yl~~a~vll~SL~~~~---~~~~lvilv~~~is~~~~~~L~~~~~~i~~V~~i~~-----~~~~~ 94 (337)
...+-|.++++| +.|+. -++.||.+.. ..+|++| .-|+-.++..+..+..+..+..+...+. +....
T Consensus 92 ~~~~pVlV~AcNRp~yl~---r~L~sLl~~rp~~~~fpIiV-SQDg~~~~~~~vi~~y~~~v~~i~~~~~~~i~~~~~~~ 167 (434)
T PF03071_consen 92 EPVIPVLVFACNRPDYLR---RTLDSLLKYRPSAEKFPIIV-SQDGDDEEVAEVIKSYGDQVTYIQHPDFSPITIPPKEK 167 (434)
T ss_dssp -----EEEEESS-TT-HH---HHHHHHHHH-S-TTTS-EEE-EE-TT-HHHHHHHHGGGGGSEEEE-S--S-----TT-G
T ss_pred CCcceEEEEecCCcHHHH---HHHHHHHHcCCCCCCccEEE-EecCCcHHHHHHHHHhhhhheeeecCCcCCceeCcccc
Confidence 344555556665 34454 5566665543 3556664 3455555666777777544333332211 11001
Q ss_pred hhhhhcccccccceec---ccccccceeEEEecccccccCchhhhCC
Q 019647 95 QYAMAYYVINYSKLRI---WEFVEYSKMIYLDGDIQVFENIDHLFDL 138 (337)
Q Consensus 95 ~~~~~~~~~~y~KL~i---~~L~~ydrVLYLDaDilV~~dideLf~~ 138 (337)
.+..-+..+.-+|..+ +....|++||.|.-|+.+--|.=+-|+.
T Consensus 168 ~~~~y~~IA~HYk~aL~~vF~~~~~~~vIIlEDDL~isPDFf~Yf~~ 214 (434)
T PF03071_consen 168 KFKGYYKIARHYKWALSQVFNKFKYSSVIILEDDLEISPDFFEYFSA 214 (434)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHTS--SEEEEEETTEEE-TTHHHHHHH
T ss_pred cccchHHHHHHHHHHHHHHHHhcCCceEEEEecCcccCccHHHHHHH
Confidence 1111000111223222 2223699999999999998887766653
No 67
>PF04765 DUF616: Protein of unknown function (DUF616); InterPro: IPR006852 The entry represents a protein of unknown function. The function of is unknown although a number of the members are thought to be glycosyltransferases.
Probab=49.66 E-value=42 Score=31.76 Aligned_cols=100 Identities=16% Similarity=0.076 Sum_probs=58.7
Q ss_pred CCeEEEEEEeeCCCcHH-HHHHHHHHHHhhCCCCcEEEEECCCCCHHHHHHHHHc-----------CcEEEEeeeeCCCC
Q 019647 24 PGRAYVTFLAGNGDYVK-GVVGLAKGLRKVKTAYPLVVAVLPDVPEEHRNILESQ-----------GCIVREIEPVYPPD 91 (337)
Q Consensus 24 ~~~AyvT~l~~d~~Yl~-~a~vll~SL~~~~~~~~lvilv~~~is~~~~~~L~~~-----------~~~i~~V~~i~~~~ 91 (337)
.+++.+|.+-++.+.+. +....-.|+ ....+++ ++|+.+.. .|+.. .++++.|+.+...+
T Consensus 63 c~vvV~saIFG~yD~l~qP~~i~~~s~----~~vcf~m-F~D~~t~~---~l~~~~~~~~~~~~ig~WrIv~v~~lp~~d 134 (305)
T PF04765_consen 63 CRVVVYSAIFGNYDKLRQPKNISEYSK----KNVCFFM-FVDEETLK---SLESEGHIPDENKKIGIWRIVVVKNLPYDD 134 (305)
T ss_pred CCEEEEEEecCCCccccCchhhCHHHh----cCccEEE-EEehhhHH---HHHhcCCccccccccCceEEEEecCCCCcc
Confidence 45777776666666553 233222222 2445554 45666543 33331 24555554432111
Q ss_pred chhhhhhhcccccccceeccccc-ccceeEEEecccccccCchhhhCC
Q 019647 92 NQTQYAMAYYVINYSKLRIWEFV-EYSKMIYLDGDIQVFENIDHLFDL 138 (337)
Q Consensus 92 ~~~~~~~~~~~~~y~KL~i~~L~-~ydrVLYLDaDilV~~dideLf~~ 138 (337)
++-..-+.|++.-.+. +|+--||+|+-+-+++|+..|.+.
T Consensus 135 -------~rr~~r~~K~lpHrlfp~y~ySIWID~ki~L~~Dp~~lie~ 175 (305)
T PF04765_consen 135 -------PRRNGRIPKLLPHRLFPNYDYSIWIDGKIQLIVDPLLLIER 175 (305)
T ss_pred -------hhhcCcccceeccccCCCCceEEEEeeeEEEecCHHHHHHH
Confidence 1112347888888764 899999999999999998887764
No 68
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=48.74 E-value=48 Score=32.84 Aligned_cols=95 Identities=16% Similarity=0.114 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHhh-CCCCcEEEEECCCCCHHHHHHHHHc---CcEEEEeeeeCCCCchhhhhhhcccccccceecccccc
Q 019647 40 KGVVGLAKGLRKV-KTAYPLVVAVLPDVPEEHRNILESQ---GCIVREIEPVYPPDNQTQYAMAYYVINYSKLRIWEFVE 115 (337)
Q Consensus 40 ~~a~vll~SL~~~-~~~~~lvilv~~~is~~~~~~L~~~---~~~i~~V~~i~~~~~~~~~~~~~~~~~y~KL~i~~L~~ 115 (337)
..+..++.|+.+. .++++++ +++|+-+++..+.+++. ...+. + +...++.. .+.... . ......
T Consensus 88 ~~i~~~l~sll~q~yp~~eIi-vVdDgs~D~t~~~~~~~~~~~~~v~-v--v~~~~n~G-ka~AlN---~----gl~~a~ 155 (444)
T PRK14583 88 LNARETIHAALAQTYTNIEVI-AINDGSSDDTAQVLDALLAEDPRLR-V--IHLAHNQG-KAIALR---M----GAAAAR 155 (444)
T ss_pred HHHHHHHHHHHcCCCCCeEEE-EEECCCCccHHHHHHHHHHhCCCEE-E--EEeCCCCC-HHHHHH---H----HHHhCC
Confidence 3456777887654 3556655 45665555554444432 22222 1 11112211 111100 0 011236
Q ss_pred cceeEEEecccccccC-chhhhCC--CCCceeee
Q 019647 116 YSKMIYLDGDIQVFEN-IDHLFDL--PDGYFYAV 146 (337)
Q Consensus 116 ydrVLYLDaDilV~~d-ideLf~~--~~~~iaAv 146 (337)
+|-++.+|+|.++-.| +..+... .+..++++
T Consensus 156 ~d~iv~lDAD~~~~~d~L~~lv~~~~~~~~~g~v 189 (444)
T PRK14583 156 SEYLVCIDGDALLDKNAVPYLVAPLIANPRTGAV 189 (444)
T ss_pred CCEEEEECCCCCcCHHHHHHHHHHHHhCCCeEEE
Confidence 8999999999998776 3344321 12235555
No 69
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=46.30 E-value=1.1e+02 Score=27.05 Aligned_cols=81 Identities=12% Similarity=0.179 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHhhCCCCcEEEEECCCCCHHHHHHHHHcCcEEEEeeeeCCCCchhhhhhhcccccccceeccccccccee
Q 019647 40 KGVVGLAKGLRKVKTAYPLVVAVLPDVPEEHRNILESQGCIVREIEPVYPPDNQTQYAMAYYVINYSKLRIWEFVEYSKM 119 (337)
Q Consensus 40 ~~a~vll~SL~~~~~~~~lvilv~~~is~~~~~~L~~~~~~i~~V~~i~~~~~~~~~~~~~~~~~y~KL~i~~L~~ydrV 119 (337)
..+..++.||.... .+++ +++++-++...+.++..+.++... . ... ++. .|=...+....|-|
T Consensus 13 ~~l~~~l~sl~~~~--~eii-vvD~gStD~t~~i~~~~~~~v~~~---~-~~g---~~~-------~~n~~~~~a~~d~v 75 (229)
T cd02511 13 RNIERCLESVKWAV--DEII-VVDSGSTDRTVEIAKEYGAKVYQR---W-WDG---FGA-------QRNFALELATNDWV 75 (229)
T ss_pred HHHHHHHHHHhccc--CEEE-EEeCCCCccHHHHHHHcCCEEEEC---C-CCC---hHH-------HHHHHHHhCCCCEE
Confidence 45666777886531 2444 567776677778888777766532 1 111 111 11112222346799
Q ss_pred EEEecccccccC-chhhhC
Q 019647 120 IYLDGDIQVFEN-IDHLFD 137 (337)
Q Consensus 120 LYLDaDilV~~d-ideLf~ 137 (337)
++||+|.++..+ +.+|.+
T Consensus 76 l~lDaD~~~~~~~~~~l~~ 94 (229)
T cd02511 76 LSLDADERLTPELADEILA 94 (229)
T ss_pred EEEeCCcCcCHHHHHHHHH
Confidence 999999998776 334443
No 70
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=46.10 E-value=29 Score=29.97 Aligned_cols=22 Identities=18% Similarity=0.335 Sum_probs=16.1
Q ss_pred cceeEEEecccccccC-chhhhC
Q 019647 116 YSKMIYLDGDIQVFEN-IDHLFD 137 (337)
Q Consensus 116 ydrVLYLDaDilV~~d-ideLf~ 137 (337)
-|-|++||+|.++..+ +..+.+
T Consensus 79 gd~i~~lD~D~~~~~~~l~~l~~ 101 (224)
T cd06442 79 GDVIVVMDADLSHPPEYIPELLE 101 (224)
T ss_pred CCEEEEEECCCCCCHHHHHHHHH
Confidence 4789999999887654 445544
No 71
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=44.68 E-value=55 Score=27.82 Aligned_cols=90 Identities=10% Similarity=0.009 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHhh-CCCCcEEEEECCCCCHHHHHHHHHcCcEE-EEeeeeCCCCchhhhhhhcccccccceecccccccc
Q 019647 40 KGVVGLAKGLRKV-KTAYPLVVAVLPDVPEEHRNILESQGCIV-REIEPVYPPDNQTQYAMAYYVINYSKLRIWEFVEYS 117 (337)
Q Consensus 40 ~~a~vll~SL~~~-~~~~~lvilv~~~is~~~~~~L~~~~~~i-~~V~~i~~~~~~~~~~~~~~~~~y~KL~i~~L~~yd 117 (337)
..+..++.||... .+...++ ++.++-+++..+.+++..... ..+..+....+.. .... +.+ .......|
T Consensus 11 ~~l~~~l~sl~~q~~~~~eii-VvddgS~d~t~~~~~~~~~~~~~~~~~~~~~~~~G-~~~~-----~n~--g~~~~~g~ 81 (214)
T cd04196 11 KYLREQLDSILAQTYKNDELI-ISDDGSTDGTVEIIKEYIDKDPFIIILIRNGKNLG-VARN-----FES--LLQAADGD 81 (214)
T ss_pred HHHHHHHHHHHhCcCCCeEEE-EEeCCCCCCcHHHHHHHHhcCCceEEEEeCCCCcc-HHHH-----HHH--HHHhCCCC
Confidence 4566778888764 3344554 455655555555555443221 1122222222211 1111 111 12234678
Q ss_pred eeEEEecccccccC-chhhhCC
Q 019647 118 KMIYLDGDIQVFEN-IDHLFDL 138 (337)
Q Consensus 118 rVLYLDaDilV~~d-ideLf~~ 138 (337)
-|++||+|.++..+ |..+.+.
T Consensus 82 ~v~~ld~Dd~~~~~~l~~~~~~ 103 (214)
T cd04196 82 YVFFCDQDDIWLPDKLERLLKA 103 (214)
T ss_pred EEEEECCCcccChhHHHHHHHH
Confidence 99999999888776 7777764
No 72
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=43.46 E-value=72 Score=26.39 Aligned_cols=88 Identities=11% Similarity=0.186 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHhhC-CCCcEEEEECCCCCHHHHHHHHHcC----cEEEEeeeeCCCCchhhhhhhcccccccceecccc
Q 019647 39 VKGVVGLAKGLRKVK-TAYPLVVAVLPDVPEEHRNILESQG----CIVREIEPVYPPDNQTQYAMAYYVINYSKLRIWEF 113 (337)
Q Consensus 39 l~~a~vll~SL~~~~-~~~~lvilv~~~is~~~~~~L~~~~----~~i~~V~~i~~~~~~~~~~~~~~~~~y~KL~i~~L 113 (337)
...+.-++.||.+.. ....++ ++.++-++...+.+++.. ..++.+ ...+.. +..+ ..+=...+.
T Consensus 9 ~~~l~~~l~sl~~q~~~~~eii-vvdd~s~d~t~~~~~~~~~~~~~~~~~~--~~~~~~---~~~~-----~~~n~g~~~ 77 (182)
T cd06420 9 PEALELVLKSVLNQSILPFEVI-IADDGSTEETKELIEEFKSQFPIPIKHV--WQEDEG---FRKA-----KIRNKAIAA 77 (182)
T ss_pred hHHHHHHHHHHHhccCCCCEEE-EEeCCCchhHHHHHHHHHhhcCCceEEE--EcCCcc---hhHH-----HHHHHHHHH
Confidence 345667788887643 345555 455655555555554432 222221 121111 1110 011122233
Q ss_pred cccceeEEEecccccccC-chhhhC
Q 019647 114 VEYSKMIYLDGDIQVFEN-IDHLFD 137 (337)
Q Consensus 114 ~~ydrVLYLDaDilV~~d-ideLf~ 137 (337)
...+-|++||+|.++..+ |..+.+
T Consensus 78 a~g~~i~~lD~D~~~~~~~l~~~~~ 102 (182)
T cd06420 78 AKGDYLIFIDGDCIPHPDFIADHIE 102 (182)
T ss_pred hcCCEEEEEcCCcccCHHHHHHHHH
Confidence 457899999999998766 444443
No 73
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=42.42 E-value=1.1e+02 Score=26.34 Aligned_cols=26 Identities=15% Similarity=0.162 Sum_probs=18.3
Q ss_pred ccccccceeEEEecccccccC-chhhh
Q 019647 111 WEFVEYSKMIYLDGDIQVFEN-IDHLF 136 (337)
Q Consensus 111 ~~L~~ydrVLYLDaDilV~~d-ideLf 136 (337)
.+....|-+++||+|.++..+ +..++
T Consensus 80 ~~~a~gd~i~~lD~D~~~~~~~l~~~~ 106 (219)
T cd06913 80 IAQSSGRYLCFLDSDDVMMPQRIRLQY 106 (219)
T ss_pred HHhcCCCEEEEECCCccCChhHHHHHH
Confidence 344567999999999887654 44444
No 74
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=40.48 E-value=1.6e+02 Score=24.59 Aligned_cols=90 Identities=16% Similarity=0.206 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHhhCC---CCcEEEEECCCCCHHHHHHHHHcCcEEEEeeeeCCCCchhhhhhhcccccccceeccccccc
Q 019647 40 KGVVGLAKGLRKVKT---AYPLVVAVLPDVPEEHRNILESQGCIVREIEPVYPPDNQTQYAMAYYVINYSKLRIWEFVEY 116 (337)
Q Consensus 40 ~~a~vll~SL~~~~~---~~~lvilv~~~is~~~~~~L~~~~~~i~~V~~i~~~~~~~~~~~~~~~~~y~KL~i~~L~~y 116 (337)
..+..++.||.+... .+.++ ++.++-+++..+.+++.+..+... ..+.+.. .+.... ..+..... .-..+
T Consensus 10 ~~i~~~l~sl~~~~~p~~~~eii-vvdd~s~D~t~~~~~~~~~~~~~~---~~~~~~g-k~~aln-~g~~~a~~-~~~~~ 82 (183)
T cd06438 10 AVIGNTVRSLKAQDYPRELYRIF-VVADNCTDDTAQVARAAGATVLER---HDPERRG-KGYALD-FGFRHLLN-LADDP 82 (183)
T ss_pred HHHHHHHHHHHhcCCCCcccEEE-EEeCCCCchHHHHHHHcCCeEEEe---CCCCCCC-HHHHHH-HHHHHHHh-cCCCC
Confidence 345567778765432 24444 456666777777777766553311 1111111 000000 00000000 01258
Q ss_pred ceeEEEecccccccC-chhhh
Q 019647 117 SKMIYLDGDIQVFEN-IDHLF 136 (337)
Q Consensus 117 drVLYLDaDilV~~d-ideLf 136 (337)
|-|+++|+|+++-.+ |..+.
T Consensus 83 d~v~~~DaD~~~~p~~l~~l~ 103 (183)
T cd06438 83 DAVVVFDADNLVDPNALEELN 103 (183)
T ss_pred CEEEEEcCCCCCChhHHHHHH
Confidence 899999999998755 33443
No 75
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=39.52 E-value=90 Score=26.30 Aligned_cols=23 Identities=13% Similarity=0.091 Sum_probs=16.9
Q ss_pred cccceeEEEecccccccC-chhhh
Q 019647 114 VEYSKMIYLDGDIQVFEN-IDHLF 136 (337)
Q Consensus 114 ~~ydrVLYLDaDilV~~d-ideLf 136 (337)
...|=++++|+|..+..+ +..+.
T Consensus 82 a~~d~i~~ld~D~~~~~~~l~~~~ 105 (202)
T cd04184 82 ATGEFVALLDHDDELAPHALYEVV 105 (202)
T ss_pred hcCCEEEEECCCCcCChHHHHHHH
Confidence 346899999999988765 44443
No 76
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=38.33 E-value=49 Score=27.48 Aligned_cols=90 Identities=14% Similarity=0.148 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHhhCC---CCcEEEEECCCCCHHHHHHHHHcCcEEEEeeeeCCCCchhhhhhhcccccccceeccccccc
Q 019647 40 KGVVGLAKGLRKVKT---AYPLVVAVLPDVPEEHRNILESQGCIVREIEPVYPPDNQTQYAMAYYVINYSKLRIWEFVEY 116 (337)
Q Consensus 40 ~~a~vll~SL~~~~~---~~~lvilv~~~is~~~~~~L~~~~~~i~~V~~i~~~~~~~~~~~~~~~~~y~KL~i~~L~~y 116 (337)
..+.-++.||.+... .+.++ ++.++-++...+.++........+..+..+++.. ... .+-...+...-
T Consensus 10 ~~l~~~l~sl~~~~~~~~~~eii-vvd~~s~d~~~~~~~~~~~~~~~~~~~~~~~n~G-~~~-------a~n~g~~~a~g 80 (185)
T cd04179 10 ENIPELVERLLAVLEEGYDYEII-VVDDGSTDGTAEIARELAARVPRVRVIRLSRNFG-KGA-------AVRAGFKAARG 80 (185)
T ss_pred hhHHHHHHHHHHHhccCCCEEEE-EEcCCCCCChHHHHHHHHHhCCCeEEEEccCCCC-ccH-------HHHHHHHHhcC
Confidence 445677888876532 44444 4555555555666655433222222222222211 111 11111122233
Q ss_pred ceeEEEecccccccC-chhhhCC
Q 019647 117 SKMIYLDGDIQVFEN-IDHLFDL 138 (337)
Q Consensus 117 drVLYLDaDilV~~d-ideLf~~ 138 (337)
|-|++||+|..+..+ ++.|...
T Consensus 81 d~i~~lD~D~~~~~~~l~~l~~~ 103 (185)
T cd04179 81 DIVVTMDADLQHPPEDIPKLLEK 103 (185)
T ss_pred CEEEEEeCCCCCCHHHHHHHHHH
Confidence 789999999988766 6667663
No 77
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=37.84 E-value=3e+02 Score=30.13 Aligned_cols=76 Identities=13% Similarity=0.036 Sum_probs=40.3
Q ss_pred EEEECCCCCHHHHHHHHHcCcEEEEeeeeCCCCchhhhhhhcccccccceecccccccceeEEEecccccccCc-hhh--
Q 019647 59 VVAVLPDVPEEHRNILESQGCIVREIEPVYPPDNQTQYAMAYYVINYSKLRIWEFVEYSKMIYLDGDIQVFENI-DHL-- 135 (337)
Q Consensus 59 vilv~~~is~~~~~~L~~~~~~i~~V~~i~~~~~~~~~~~~~~~~~y~KL~i~~L~~ydrVLYLDaDilV~~di-deL-- 135 (337)
+++++|+-+++..+..++.++.++. .+++....+... .... +..+.|-|+.+|+|.++..|. ..+
T Consensus 295 ViVVDDgS~D~t~~la~~~~v~yI~-----R~~n~~gKAGnL--N~aL-----~~a~GEyIavlDAD~ip~pdfL~~~V~ 362 (852)
T PRK11498 295 IWILDDGGREEFRQFAQEVGVKYIA-----RPTHEHAKAGNI--NNAL-----KYAKGEFVAIFDCDHVPTRSFLQMTMG 362 (852)
T ss_pred EEEEeCCCChHHHHHHHHCCcEEEE-----eCCCCcchHHHH--HHHH-----HhCCCCEEEEECCCCCCChHHHHHHHH
Confidence 3456777777777777777765432 112110000000 0001 113579999999999988764 333
Q ss_pred -hCCCCCceeeee
Q 019647 136 -FDLPDGYFYAVM 147 (337)
Q Consensus 136 -f~~~~~~iaAv~ 147 (337)
|..+ ..+|.|.
T Consensus 363 ~f~~d-P~VglVQ 374 (852)
T PRK11498 363 WFLKD-KKLAMMQ 374 (852)
T ss_pred HHHhC-CCeEEEE
Confidence 2222 3366664
No 78
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=36.89 E-value=70 Score=31.66 Aligned_cols=100 Identities=9% Similarity=0.056 Sum_probs=49.0
Q ss_pred CCCeEEEEEEeeCCCcHHHHHHHHHHHHhhC-CCCcE-EEEECCCCCHHHHHHHHH---cCcEEEEeeeeCCCCchhhhh
Q 019647 23 LPGRAYVTFLAGNGDYVKGVVGLAKGLRKVK-TAYPL-VVAVLPDVPEEHRNILES---QGCIVREIEPVYPPDNQTQYA 97 (337)
Q Consensus 23 ~~~~AyvT~l~~d~~Yl~~a~vll~SL~~~~-~~~~l-vilv~~~is~~~~~~L~~---~~~~i~~V~~i~~~~~~~~~~ 97 (337)
.+++..+.- +-|+. ..+..++.|+.+.. +...+ +++++++-+++..+.+++ ....+ .+..++.... .+
T Consensus 48 ~P~vsVIIP-~yNe~--~~l~~~l~sl~~q~yp~~~~eIiVVDd~StD~T~~il~~~~~~~~~v-~v~~~~~~~G---ka 120 (439)
T TIGR03111 48 LPDITIIIP-VYNSE--DTLFNCIESIYNQTYPIELIDIILANNQSTDDSFQVFCRAQNEFPGL-SLRYMNSDQG---KA 120 (439)
T ss_pred CCCEEEEEE-eCCCh--HHHHHHHHHHHhcCCCCCCeEEEEEECCCChhHHHHHHHHHHhCCCe-EEEEeCCCCC---HH
Confidence 345544432 22433 55677888887643 33223 446677777766655543 22222 1222222111 11
Q ss_pred hhcccccccceecccccccceeEEEecccccccC-chhhh
Q 019647 98 MAYYVINYSKLRIWEFVEYSKMIYLDGDIQVFEN-IDHLF 136 (337)
Q Consensus 98 ~~~~~~~y~KL~i~~L~~ydrVLYLDaDilV~~d-ideLf 136 (337)
.... ...+....|-|+.+|+|.++-.| +.++.
T Consensus 121 ~AlN-------~gl~~s~g~~v~~~DaD~~~~~d~L~~l~ 153 (439)
T TIGR03111 121 KALN-------AAIYNSIGKYIIHIDSDGKLHKDAIKNMV 153 (439)
T ss_pred HHHH-------HHHHHccCCEEEEECCCCCcChHHHHHHH
Confidence 1100 01112234669999999999765 44443
No 79
>PF03314 DUF273: Protein of unknown function, DUF273; InterPro: IPR004988 This is a family of proteins of unknown function.
Probab=35.94 E-value=22 Score=31.76 Aligned_cols=83 Identities=18% Similarity=0.284 Sum_probs=48.1
Q ss_pred cccceeEEEecccccccCchhhhCC-CCCceeeeechhccCCCCCCCcccccccccCCCCCCCCcccCCCCCccccceeE
Q 019647 114 VEYSKMIYLDGDIQVFENIDHLFDL-PDGYFYAVMDCFCEKTWSKTPQYKIGYCQQCPDRVRWPAEMGEPPALYFNAGMF 192 (337)
Q Consensus 114 ~~ydrVLYLDaDilV~~dideLf~~-~~~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~~g~~~~~yfNsGVm 192 (337)
.++|-||+||+||-|+.+=.-+=+. ++. +..+.- ++.. ..-+.+|--
T Consensus 40 ~~~~~vlflDaDigVvNp~~~iEefid~~-~Di~fy----------------------dR~~---------n~Ei~agsY 87 (222)
T PF03314_consen 40 PEYDWVLFLDADIGVVNPNRRIEEFIDEG-YDIIFY----------------------DRFF---------NWEIAAGSY 87 (222)
T ss_pred ccCCEEEEEcCCceeecCcccHHHhcCCC-CcEEEE----------------------eccc---------chhhhhccc
Confidence 4789999999999999763333222 211 111100 0110 123567888
Q ss_pred EEecCHHHHHHHHHHHhc----CCCCCCCChHHHHHHhcC
Q 019647 193 VFEPSISTYHDLLETVKV----TPPTTFAEQDFLNMYFKH 228 (337)
Q Consensus 193 lin~~~~~~~~l~~~~~~----~~~~~~~DQdiLN~~f~~ 228 (337)
+++...+.-+-+.+++.- ..++...|-++|-.++.+
T Consensus 88 lvkNT~~~~~fl~~~a~~E~~lP~sfhGtDNGAlH~~L~e 127 (222)
T PF03314_consen 88 LVKNTEYSRDFLKEWADYEFKLPNSFHGTDNGALHIFLAE 127 (222)
T ss_pred eeeCCHHHHHHHHHHhhhCccCCCccccCccHHHHHHHHH
Confidence 888777665555554421 124556899999888764
No 80
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional
Probab=33.81 E-value=1.4e+02 Score=28.04 Aligned_cols=89 Identities=13% Similarity=0.111 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHhhCC---CCcEEEEECCCCCHHHHHHHHHcCcEEEE-eeeeCC-CCchhhhhhhcccccccceeccccc
Q 019647 40 KGVVGLAKGLRKVKT---AYPLVVAVLPDVPEEHRNILESQGCIVRE-IEPVYP-PDNQTQYAMAYYVINYSKLRIWEFV 114 (337)
Q Consensus 40 ~~a~vll~SL~~~~~---~~~lvilv~~~is~~~~~~L~~~~~~i~~-V~~i~~-~~~~~~~~~~~~~~~y~KL~i~~L~ 114 (337)
..+..++.||.+... ...+ |+++++-++...+.+++.+.++.. ...+.. +.+. ..... .. ......
T Consensus 44 ~~I~~~l~sl~~~~~~~~~~EI-IVVDDgStD~T~~ia~~~~~~v~~~~~~~~~~~~n~-Gkg~A-----~~--~g~~~a 114 (306)
T PRK13915 44 ETVGKVVDSIRPLLMEPLVDEL-IVIDSGSTDATAERAAAAGARVVSREEILPELPPRP-GKGEA-----LW--RSLAAT 114 (306)
T ss_pred HHHHHHHHHHHHHhccCCCcEE-EEEeCCCccHHHHHHHHhcchhhcchhhhhccccCC-CHHHH-----HH--HHHHhc
Confidence 345566777765321 2344 456777777777778777655432 111110 1111 01111 10 011223
Q ss_pred ccceeEEEecccc-cc-cCchhhhC
Q 019647 115 EYSKMIYLDGDIQ-VF-ENIDHLFD 137 (337)
Q Consensus 115 ~ydrVLYLDaDil-V~-~dideLf~ 137 (337)
..|-|+++|+|.. .- +.|..|..
T Consensus 115 ~gd~vv~lDaD~~~~~p~~l~~l~~ 139 (306)
T PRK13915 115 TGDIVVFVDADLINFDPMFVPGLLG 139 (306)
T ss_pred CCCEEEEEeCccccCCHHHHHHHHH
Confidence 5689999999997 42 33555554
No 81
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=33.81 E-value=1.2e+02 Score=26.85 Aligned_cols=23 Identities=9% Similarity=0.244 Sum_probs=16.5
Q ss_pred ccceeEEEecccccccC-chhhhC
Q 019647 115 EYSKMIYLDGDIQVFEN-IDHLFD 137 (337)
Q Consensus 115 ~ydrVLYLDaDilV~~d-ideLf~ 137 (337)
..|-|+++|+|..+..+ |.+|++
T Consensus 93 ~g~~i~~lD~D~~~~~~~l~~l~~ 116 (243)
T PLN02726 93 SGDFVVIMDADLSHHPKYLPSFIK 116 (243)
T ss_pred CCCEEEEEcCCCCCCHHHHHHHHH
Confidence 56899999999986432 455554
No 82
>PRK10073 putative glycosyl transferase; Provisional
Probab=31.78 E-value=1.6e+02 Score=27.88 Aligned_cols=91 Identities=13% Similarity=0.086 Sum_probs=46.0
Q ss_pred CcHHHHHHHHHHHHhh-CCCCcEEEEECCCCCHHHHHHHHHcCcEEEEeeeeCCCCchhhhhhhcccccccceecccccc
Q 019647 37 DYVKGVVGLAKGLRKV-KTAYPLVVAVLPDVPEEHRNILESQGCIVREIEPVYPPDNQTQYAMAYYVINYSKLRIWEFVE 115 (337)
Q Consensus 37 ~Yl~~a~vll~SL~~~-~~~~~lvilv~~~is~~~~~~L~~~~~~i~~V~~i~~~~~~~~~~~~~~~~~y~KL~i~~L~~ 115 (337)
+--..+.-++.||... .++..++ ++.|+-++.+.+.+++.......|..+.. ++. ..+.. |=...+...
T Consensus 16 N~~~~L~~~l~Sl~~Qt~~~~EII-iVdDgStD~t~~i~~~~~~~~~~i~vi~~-~n~-G~~~a-------rN~gl~~a~ 85 (328)
T PRK10073 16 NAGKDFRAFMESLIAQTWTALEII-IVNDGSTDNSVEIAKHYAENYPHVRLLHQ-ANA-GVSVA-------RNTGLAVAT 85 (328)
T ss_pred CCHHHHHHHHHHHHhCCCCCeEEE-EEeCCCCccHHHHHHHHHhhCCCEEEEEC-CCC-ChHHH-------HHHHHHhCC
Confidence 3345566778898754 2344544 56777666665555543111111222221 221 11111 111122234
Q ss_pred cceeEEEecccccccC-chhhhC
Q 019647 116 YSKMIYLDGDIQVFEN-IDHLFD 137 (337)
Q Consensus 116 ydrVLYLDaDilV~~d-ideLf~ 137 (337)
-+-|++||+|-.+..+ +..+.+
T Consensus 86 g~yi~flD~DD~~~p~~l~~l~~ 108 (328)
T PRK10073 86 GKYVAFPDADDVVYPTMYETLMT 108 (328)
T ss_pred CCEEEEECCCCccChhHHHHHHH
Confidence 5789999999998766 444544
No 83
>KOG0795 consensus Chorismate mutase [Amino acid transport and metabolism]
Probab=31.39 E-value=23 Score=31.57 Aligned_cols=31 Identities=29% Similarity=0.378 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHhhccccccCCCCCCCCCCCC
Q 019647 284 KMLVKKWWDIYNDESLDYKKPSADGNAGSVN 314 (337)
Q Consensus 284 ~~~~~~Ww~~~~~~~~~~~~~~~~~~~~~~~ 314 (337)
+...+.|--|+++..-.+.++..|||-||+-
T Consensus 115 NiNkkIw~~Yf~~lvP~ivkpGDDgNygSta 145 (262)
T KOG0795|consen 115 NINKKIWNMYFKELVPLIVKPGDDGNYGSTA 145 (262)
T ss_pred chhHHHHHHHHHHHhhhhcCCCCCCCcchHH
Confidence 3456888888999999999999999999973
No 84
>PRK10018 putative glycosyl transferase; Provisional
Probab=27.75 E-value=3.3e+02 Score=25.17 Aligned_cols=24 Identities=13% Similarity=0.106 Sum_probs=18.5
Q ss_pred cccceeEEEecccccccC-chhhhC
Q 019647 114 VEYSKMIYLDGDIQVFEN-IDHLFD 137 (337)
Q Consensus 114 ~~ydrVLYLDaDilV~~d-ideLf~ 137 (337)
...+-|++||+|.++..+ |..+.+
T Consensus 84 a~g~~I~~lDaDD~~~p~~l~~~~~ 108 (279)
T PRK10018 84 AQGEYITGIDDDDEWTPNRLSVFLA 108 (279)
T ss_pred cCCCEEEEECCCCCCCccHHHHHHH
Confidence 356889999999999876 555554
No 85
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=27.52 E-value=3e+02 Score=29.27 Aligned_cols=34 Identities=21% Similarity=0.209 Sum_probs=24.3
Q ss_pred cccceeEEEecccccccC-chhhhCC-C-CCceeeee
Q 019647 114 VEYSKMIYLDGDIQVFEN-IDHLFDL-P-DGYFYAVM 147 (337)
Q Consensus 114 ~~ydrVLYLDaDilV~~d-ideLf~~-~-~~~iaAv~ 147 (337)
..||-++.||+|+++-+| +..+... . +..+|+|.
T Consensus 219 ~~~eyivvLDADs~m~~d~L~~lv~~m~~dP~vGlVQ 255 (691)
T PRK05454 219 GAYDYMVVLDADSLMSGDTLVRLVRLMEANPRAGLIQ 255 (691)
T ss_pred CCcCEEEEEcCCCCCCHHHHHHHHHHHhhCcCEEEEe
Confidence 368999999999999987 5555542 1 33477765
No 86
>COG5020 KTR1 Mannosyltransferase [Carbohydrate transport and metabolism]
Probab=26.63 E-value=2.1e+02 Score=27.95 Aligned_cols=117 Identities=17% Similarity=0.172 Sum_probs=66.3
Q ss_pred CCCCCCeEEEEEEeeCCCcHHHHHHHHHHHHhh-CC--CCcEEEEECCCCCHHHHHHHHHcC---cEEEEeeeeC--CCC
Q 019647 20 PASLPGRAYVTFLAGNGDYVKGVVGLAKGLRKV-KT--AYPLVVAVLPDVPEEHRNILESQG---CIVREIEPVY--PPD 91 (337)
Q Consensus 20 ~~~~~~~AyvT~l~~d~~Yl~~a~vll~SL~~~-~~--~~~lvilv~~~is~~~~~~L~~~~---~~i~~V~~i~--~~~ 91 (337)
...+.+-++|+ |+.|.+ +.+++.+++|+..+ |. .||.+.+=++..+++-++..++.- +++-.|..-. .|+
T Consensus 77 ~~~r~natfv~-L~RN~d-L~~vl~Si~svE~rFNk~f~YpwvFLNdepFteeFk~~~~~~~s~~~~fg~i~~e~W~~P~ 154 (399)
T COG5020 77 SYPRENATFVM-LARNSD-LEDVLSSIRSVEDRFNKNFHYPWVFLNDEPFTEEFKEATSDITSGLTEFGLIPKDEWNFPE 154 (399)
T ss_pred CCCCcccEEEE-EEechh-HHHHHHHHHHHHHHhhccCCCCeEEecCchhHHHHHHHHHHHhccceEEEEECHHHcCCcc
Confidence 33467888888 556666 99999999999654 33 688886655558887776665532 2222222111 111
Q ss_pred ch---------hhhhh-------hcccccccce----ec--ccccccceeEEEecccccccCch-hhhCC
Q 019647 92 NQ---------TQYAM-------AYYVINYSKL----RI--WEFVEYSKMIYLDGDIQVFENID-HLFDL 138 (337)
Q Consensus 92 ~~---------~~~~~-------~~~~~~y~KL----~i--~~L~~ydrVLYLDaDilV~~did-eLf~~ 138 (337)
.. ..++. +.+--...|+ +. |-|.+||=+==++.|+=..-||+ +.|..
T Consensus 155 ~Id~~~~~e~~~~~~~~~i~Yg~s~SYr~MCRf~SgfFyrHpll~~Yd~yWRvEP~vk~~Cdi~yDpF~~ 224 (399)
T COG5020 155 WIDEDKAAESLDDMADEGILYGGSESYRHMCRFFSGFFYRHPLLDEYDYYWRVEPDVKLYCDIDYDPFRY 224 (399)
T ss_pred ccchHHHHHHHHHHhhcCccccCcHHHHHHHHHhhcceeecccchhcceEEEecCCceEEeccCCCHHHH
Confidence 10 11111 0000112233 22 22347998888899998888887 45654
No 87
>KOG4472 consensus Glycolipid 2-alpha-mannosyltransferase (alpha-1,2-mannosyltransferase) [Carbohydrate transport and metabolism]
Probab=26.63 E-value=2.1e+02 Score=27.95 Aligned_cols=117 Identities=17% Similarity=0.172 Sum_probs=66.3
Q ss_pred CCCCCCeEEEEEEeeCCCcHHHHHHHHHHHHhh-CC--CCcEEEEECCCCCHHHHHHHHHcC---cEEEEeeeeC--CCC
Q 019647 20 PASLPGRAYVTFLAGNGDYVKGVVGLAKGLRKV-KT--AYPLVVAVLPDVPEEHRNILESQG---CIVREIEPVY--PPD 91 (337)
Q Consensus 20 ~~~~~~~AyvT~l~~d~~Yl~~a~vll~SL~~~-~~--~~~lvilv~~~is~~~~~~L~~~~---~~i~~V~~i~--~~~ 91 (337)
...+.+-++|+ |+.|.+ +.+++.+++|+..+ |. .||.+.+=++..+++-++..++.- +++-.|..-. .|+
T Consensus 77 ~~~r~natfv~-L~RN~d-L~~vl~Si~svE~rFNk~f~YpwvFLNdepFteeFk~~~~~~~s~~~~fg~i~~e~W~~P~ 154 (399)
T KOG4472|consen 77 SYPRENATFVM-LARNSD-LEDVLSSIRSVEDRFNKNFHYPWVFLNDEPFTEEFKEATSDITSGLTEFGLIPKDEWNFPE 154 (399)
T ss_pred CCCCcccEEEE-EEechh-HHHHHHHHHHHHHHhhccCCCCeEEecCchhHHHHHHHHHHHhccceEEEEECHHHcCCcc
Confidence 33467888888 556666 99999999999654 33 688886655558887776665532 2222222111 111
Q ss_pred ch---------hhhhh-------hcccccccce----ec--ccccccceeEEEecccccccCch-hhhCC
Q 019647 92 NQ---------TQYAM-------AYYVINYSKL----RI--WEFVEYSKMIYLDGDIQVFENID-HLFDL 138 (337)
Q Consensus 92 ~~---------~~~~~-------~~~~~~y~KL----~i--~~L~~ydrVLYLDaDilV~~did-eLf~~ 138 (337)
.. ..++. +.+--...|+ +. |-|.+||=+==++.|+=..-||+ +.|..
T Consensus 155 ~Id~~~~~e~~~~~~~~~i~Yg~s~SYr~MCRf~SgfFyrHpll~~Yd~yWRvEP~vk~~Cdi~yDpF~~ 224 (399)
T KOG4472|consen 155 WIDEDKAAESLDDMADEGILYGGSESYRHMCRFFSGFFYRHPLLDEYDYYWRVEPDVKLYCDIDYDPFRY 224 (399)
T ss_pred ccchHHHHHHHHHHhhcCccccCcHHHHHHHHHhhcceeecccchhcceEEEecCCceEEeccCCCHHHH
Confidence 10 11111 0000112233 22 22347998888899998888887 45654
No 88
>COG1216 Predicted glycosyltransferases [General function prediction only]
Probab=25.76 E-value=1.9e+02 Score=26.82 Aligned_cols=96 Identities=11% Similarity=0.126 Sum_probs=55.0
Q ss_pred CCCcHHHHHHHHHHHHhhCCCCcEEEEECCCCCHHHHHHHHHcCcEEEEeeeeCCCCchhhhhhhcccccccceeccccc
Q 019647 35 NGDYVKGVVGLAKGLRKVKTAYPLVVAVLPDVPEEHRNILESQGCIVREIEPVYPPDNQTQYAMAYYVINYSKLRIWEFV 114 (337)
Q Consensus 35 d~~Yl~~a~vll~SL~~~~~~~~lvilv~~~is~~~~~~L~~~~~~i~~V~~i~~~~~~~~~~~~~~~~~y~KL~i~~L~ 114 (337)
+-+....+..++.||.........+++++++-++...+.++... ...|..+...++.. ++.. +.+...-.+.
T Consensus 11 ~yn~~~~l~~~l~~l~~~~~~~~~iv~vDn~s~d~~~~~~~~~~--~~~v~~i~~~~NlG-~agg-----~n~g~~~a~~ 82 (305)
T COG1216 11 TYNRGEDLVECLASLAAQTYPDDVIVVVDNGSTDGSLEALKARF--FPNVRLIENGENLG-FAGG-----FNRGIKYALA 82 (305)
T ss_pred ecCCHHHHHHHHHHHhcCCCCCcEEEEccCCCCCCCHHHHHhhc--CCcEEEEEcCCCcc-chhh-----hhHHHHHHhc
Confidence 45677888889999987754444444566666666777777752 12233444444421 2221 1211111122
Q ss_pred c-cceeEEEecccccccC-chhhhCC
Q 019647 115 E-YSKMIYLDGDIQVFEN-IDHLFDL 138 (337)
Q Consensus 115 ~-ydrVLYLDaDilV~~d-ideLf~~ 138 (337)
+ ++-++.|+.|+++-.+ |.+|.+.
T Consensus 83 ~~~~~~l~LN~D~~~~~~~l~~ll~~ 108 (305)
T COG1216 83 KGDDYVLLLNPDTVVEPDLLEELLKA 108 (305)
T ss_pred CCCcEEEEEcCCeeeChhHHHHHHHH
Confidence 2 3379999999777544 6777765
No 89
>PF04724 Glyco_transf_17: Glycosyltransferase family 17; InterPro: IPR006813 This family represents beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase (2.4.1.144 from EC). This enzyme transfers the bisecting GlcNAc to the core mannose of complex N-glycans. The addition of this residue is regulated during development and has functional consequences for receptor signalling, cell adhesion, and tumour progression [, ].; GO: 0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0016020 membrane
Probab=25.38 E-value=2.2e+02 Score=27.58 Aligned_cols=48 Identities=21% Similarity=0.110 Sum_probs=26.9
Q ss_pred CCCCCCCCCCCCCCeEEEEEEeeCCCcHHHHHHHHHHHHhhCCCCcEEEEECCC
Q 019647 12 KPAGLGAKPASLPGRAYVTFLAGNGDYVKGVVGLAKGLRKVKTAYPLVVAVLPD 65 (337)
Q Consensus 12 ~~~~~~~~~~~~~~~AyvT~l~~d~~Yl~~a~vll~SL~~~~~~~~lvilv~~~ 65 (337)
.+.||...- ..+|.+|-.++.+++ +-.|-..|.+..+-.+.+|++...
T Consensus 67 ~~~~~~~~R-~~pRrV~D~~~f~~E-----lDlLeiRl~eL~~vVD~FVIvEs~ 114 (356)
T PF04724_consen 67 CQLHGWKPR-KTPRRVYDCFLFNNE-----LDLLEIRLNELYDVVDYFVIVESN 114 (356)
T ss_pred ccccCCCcC-CCCCeEEEEEEeCCh-----HHHHHHHHHHhhCcceEEEEEEEC
Confidence 344665444 555566655554442 444555566666677766666544
No 90
>PF11316 Rhamno_transf: Putative rhamnosyl transferase ; InterPro: IPR021466 This bacterial family of proteins has no known function.
Probab=24.35 E-value=1.2e+02 Score=27.55 Aligned_cols=36 Identities=22% Similarity=0.234 Sum_probs=28.2
Q ss_pred HHHHHHHHHh-hCCCCcEEEEECCCCCHHHHHHHHHc
Q 019647 42 VVGLAKGLRK-VKTAYPLVVAVLPDVPEEHRNILESQ 77 (337)
Q Consensus 42 a~vll~SL~~-~~~~~~lvilv~~~is~~~~~~L~~~ 77 (337)
-.+++-||+. ++++..++|++.+.+++..+++|+.+
T Consensus 44 e~~~LpSl~~QTd~dF~~lv~~~~~~P~~~~~rL~~l 80 (234)
T PF11316_consen 44 ETYCLPSLRAQTDQDFTWLVLFDDDLPEPYRERLRDL 80 (234)
T ss_pred HHHHhhHHHhccCCCeEEEEEECCCCCHHHHHHHHHH
Confidence 3467888864 56677778788888999999999876
No 91
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=23.85 E-value=1.9e+02 Score=23.92 Aligned_cols=23 Identities=22% Similarity=0.260 Sum_probs=17.3
Q ss_pred cceeEEEecccccccC-chhhhCC
Q 019647 116 YSKMIYLDGDIQVFEN-IDHLFDL 138 (337)
Q Consensus 116 ydrVLYLDaDilV~~d-ideLf~~ 138 (337)
.|-|+++|+|...-.+ +..+.+.
T Consensus 81 ~d~i~~~D~D~~~~~~~l~~l~~~ 104 (181)
T cd04187 81 GDAVITMDADLQDPPELIPEMLAK 104 (181)
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHH
Confidence 4889999999998554 5666653
No 92
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine. N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.
Probab=21.43 E-value=3.3e+02 Score=22.93 Aligned_cols=35 Identities=9% Similarity=0.133 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHhhCCCCcEEEEECCCCCHHHHHHHH
Q 019647 40 KGVVGLAKGLRKVKTAYPLVVAVLPDVPEEHRNILE 75 (337)
Q Consensus 40 ~~a~vll~SL~~~~~~~~lvilv~~~is~~~~~~L~ 75 (337)
..+..++.||.+..+.+.++ +++++-++...+.++
T Consensus 10 ~~l~~~l~sl~~~~~~~eIi-vvdd~S~D~t~~~~~ 44 (191)
T cd06436 10 AVIQRTLASLLRNKPNFLVL-VIDDASDDDTAGIVR 44 (191)
T ss_pred HHHHHHHHHHHhCCCCeEEE-EEECCCCcCHHHHHh
Confidence 44667788887654455544 556666666666665
No 93
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2
Probab=21.26 E-value=2.4e+02 Score=20.83 Aligned_cols=68 Identities=13% Similarity=0.079 Sum_probs=32.6
Q ss_pred CcEEEEECCCCCHHHHHHHHHcC-cEEEEeeeeCCCCchhhhhhhcccccccceecccccccceeEEEecccccccC
Q 019647 56 YPLVVAVLPDVPEEHRNILESQG-CIVREIEPVYPPDNQTQYAMAYYVINYSKLRIWEFVEYSKMIYLDGDIQVFEN 131 (337)
Q Consensus 56 ~~lvilv~~~is~~~~~~L~~~~-~~i~~V~~i~~~~~~~~~~~~~~~~~y~KL~i~~L~~ydrVLYLDaDilV~~d 131 (337)
.+-++++.++-++...+.|++.. ..++. ...+... ..... .+.+..+-...+.+=|+++|+|=++.-+
T Consensus 19 ~d~i~i~d~~s~D~t~~~l~~~~~v~i~~--~~~~~~~-~~~~~-----~~~~~~~~~~~~~dWvl~~D~DEfl~~~ 87 (97)
T PF13704_consen 19 VDHIYIYDDGSTDGTREILRALPGVGIIR--WVDPYRD-ERRQR-----AWRNALIERAFDADWVLFLDADEFLVPP 87 (97)
T ss_pred CCEEEEEECCCCccHHHHHHhCCCcEEEE--eCCCccc-hHHHH-----HHHHHHHHhCCCCCEEEEEeeeEEEecC
Confidence 45445567777777777787752 22221 1111111 00000 1122222222367888888888766543
No 94
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=20.95 E-value=4.4e+02 Score=27.30 Aligned_cols=103 Identities=17% Similarity=0.163 Sum_probs=51.1
Q ss_pred CCeEEEEEEeeCCC---cHHHHHHHHHHHHhhCC--CCcEEEEECCCCCH-----HH---HHHHHHcC--cEE-EEeeee
Q 019647 24 PGRAYVTFLAGNGD---YVKGVVGLAKGLRKVKT--AYPLVVAVLPDVPE-----EH---RNILESQG--CIV-REIEPV 87 (337)
Q Consensus 24 ~~~AyvT~l~~d~~---Yl~~a~vll~SL~~~~~--~~~lvilv~~~is~-----~~---~~~L~~~~--~~i-~~V~~i 87 (337)
.+-|.+-=+ +|++ -+.++.++..||.+++. ..|++|+- |.-.+ |. .+..++.+ .++ .....
T Consensus 144 hrTAilmPi-ynEd~~rVfAgLrA~~eSla~Tg~~~~FD~FVLS-Ds~dpdialAEq~a~~~l~~e~~g~~~ifYRrRr- 220 (736)
T COG2943 144 HRTAILMPI-YNEDVNRVFAGLRATYESLAATGHAEHFDFFVLS-DSRDPDIALAEQKAWAELCRELGGEGNIFYRRRR- 220 (736)
T ss_pred cceeEEeec-cccCHHHHHHHHHHHHHHHHhhCCcccceEEEEc-CCCCchhhhhHHHHHHHHHHHhCCCCceeeehHh-
Confidence 344444322 3543 46688899999998865 56777654 33221 11 12222222 222 11110
Q ss_pred CCCCchhhhhhhcccccccceecccccccceeEEEecccccccC-chhhhC
Q 019647 88 YPPDNQTQYAMAYYVINYSKLRIWEFVEYSKMIYLDGDIQVFEN-IDHLFD 137 (337)
Q Consensus 88 ~~~~~~~~~~~~~~~~~y~KL~i~~L~~ydrVLYLDaDilV~~d-ideLf~ 137 (337)
++.+. ++.+.+-|.|=+= ..|+..|.||+|.+..+| +..|-+
T Consensus 221 ---~n~~R--KaGNIaDfcrRwG---~~Y~~MlVLDADSvMtgd~lvrLv~ 263 (736)
T COG2943 221 ---RNVKR--KAGNIADFCRRWG---SAYSYMLVLDADSVMTGDCLVRLVR 263 (736)
T ss_pred ---hhhcc--cccCHHHHHHHhC---cccceEEEeecccccCchHHHHHHH
Confidence 11000 0112223333221 369999999999999987 334433
Done!