Query 019649
Match_columns 337
No_of_seqs 258 out of 2195
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 05:00:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019649.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019649hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hqi_A Speckle-type POZ protei 100.0 2.5E-60 8.5E-65 425.3 30.3 300 14-337 2-310 (312)
2 3htm_A Speckle-type POZ protei 100.0 4.7E-33 1.6E-37 227.1 14.9 158 166-337 13-170 (172)
3 4eoz_A Speckle-type POZ protei 100.0 5E-31 1.7E-35 209.0 8.2 142 166-319 4-145 (145)
4 3hve_A Gigaxonin; ubiquitin, c 100.0 7.7E-30 2.6E-34 221.3 10.6 154 170-337 14-169 (256)
5 3i3n_A Kelch-like protein 11; 100.0 5.2E-29 1.8E-33 218.7 9.1 153 171-337 16-177 (279)
6 3ivv_A Speckle-type POZ protei 99.9 4.9E-27 1.7E-31 185.6 12.3 133 14-156 6-144 (145)
7 4ghu_A TNF receptor-associated 99.9 1.9E-26 6.5E-31 190.4 9.5 140 16-156 37-188 (198)
8 4gjh_A TNF receptor-associated 99.9 2.7E-26 9.3E-31 187.2 10.0 138 15-156 20-174 (178)
9 2if5_A Zinc finger and BTB dom 99.9 3.6E-26 1.2E-30 174.8 9.8 111 171-293 9-119 (120)
10 1r29_A B-cell lymphoma 6 prote 99.9 2.5E-25 8.6E-30 171.8 11.9 114 170-296 12-126 (127)
11 2vkp_A BTB/POZ domain-containi 99.9 1.3E-25 4.6E-30 168.6 10.0 104 181-297 2-109 (109)
12 2foj_A Ubiquitin carboxyl-term 99.9 4.5E-25 1.5E-29 176.4 12.5 126 17-156 17-149 (155)
13 2z8h_A Transcription regulator 99.9 8.6E-26 2.9E-30 176.9 7.2 119 169-301 18-137 (138)
14 1lb6_A TNF receptor-associated 99.9 3E-25 1E-29 178.2 10.5 136 17-156 3-157 (160)
15 3b84_A Zinc finger and BTB dom 99.9 2.8E-25 9.5E-30 169.4 9.3 109 172-296 9-117 (119)
16 2ppi_A Gigaxonin; BTB domain, 99.9 3.1E-25 1.1E-29 174.7 9.4 111 172-294 32-144 (144)
17 2vpk_A Myoneurin; transcriptio 99.9 1.2E-24 4.1E-29 165.2 11.0 107 172-294 7-115 (116)
18 2yy9_A Zinc finger and BTB dom 99.9 4.9E-25 1.7E-29 171.7 8.8 114 172-301 10-123 (135)
19 1buo_A POZ domain, protein (pr 99.9 1.4E-24 4.9E-29 166.0 11.1 109 171-296 12-120 (121)
20 2gkw_A TNF receptor-associated 99.9 3.9E-25 1.3E-29 182.3 7.1 136 17-156 38-188 (192)
21 1ca9_A TRAF2, protein (TNF rec 99.9 8.1E-25 2.8E-29 180.8 8.5 136 16-156 40-191 (192)
22 1d00_A Tumor necrosis factor r 99.9 1.9E-24 6.7E-29 175.0 9.3 136 16-156 16-167 (168)
23 2q81_A MIZ-1 protein; BTB/POZ 99.9 4.7E-24 1.6E-28 162.6 8.7 107 171-294 11-117 (119)
24 1flk_A TNF receptor associated 99.9 2.8E-24 9.7E-29 181.8 8.1 137 16-156 73-224 (228)
25 2ihc_A Transcription regulator 99.9 3.8E-25 1.3E-29 169.9 1.2 112 169-294 11-123 (124)
26 3ga1_A Nucleus accumbens-assoc 99.9 2.3E-24 8E-29 166.7 5.4 110 171-296 17-127 (129)
27 3ohu_A Transcription regulator 99.9 1E-24 3.5E-29 167.9 3.0 109 171-293 16-125 (125)
28 3fkc_A Transcriptional regulat 99.9 7.9E-22 2.7E-26 149.3 10.9 100 171-287 15-115 (116)
29 3m5b_A Zinc finger and BTB dom 99.9 2.1E-22 7.1E-27 153.0 6.3 101 172-295 17-117 (119)
30 2f1z_A Ubiquitin carboxyl-term 99.8 2.5E-20 8.6E-25 177.3 10.6 127 16-156 28-161 (522)
31 2ast_A S-phase kinase-associat 99.5 7.8E-14 2.7E-18 111.0 10.0 127 190-317 3-149 (159)
32 4gwm_A Meprin A subunit beta; 99.4 1.2E-12 4.1E-17 123.6 11.8 137 13-158 400-569 (592)
33 4ajy_C Transcription elongatio 99.2 2.2E-11 7.5E-16 88.3 7.8 82 190-281 4-96 (97)
34 1fs1_B SKP1, cyclin A/CDK2-ass 99.2 8.7E-11 3E-15 91.1 8.9 110 190-304 4-128 (141)
35 2p1m_A SKP1-like protein 1A; F 99.0 1.1E-10 3.7E-15 92.7 2.5 120 190-313 6-144 (160)
36 3drz_A BTB/POZ domain-containi 98.6 2.5E-07 8.6E-12 67.9 8.8 96 188-295 6-106 (107)
37 1hv2_A Elongin C, ELC1; protei 98.6 2.3E-07 7.7E-12 67.0 7.8 89 189-282 5-99 (99)
38 3v7d_A Suppressor of kinetocho 98.6 4E-07 1.4E-11 72.5 10.0 122 189-311 8-150 (169)
39 2fnj_C Transcription elongatio 98.5 2.1E-07 7.3E-12 66.8 5.7 89 190-282 3-96 (96)
40 1vcb_B Protein (elongin C); tu 98.1 7.1E-06 2.4E-10 60.4 6.4 90 189-282 18-112 (112)
41 3drx_A BTB/POZ domain-containi 97.6 7.3E-05 2.5E-09 60.4 5.9 97 188-296 12-113 (202)
42 2eqx_A Kelch repeat and BTB do 97.2 0.00015 5E-09 52.8 2.8 43 293-337 4-46 (105)
43 3kvt_A Potassium channel prote 96.4 0.00063 2.2E-08 50.1 0.6 96 189-296 6-105 (115)
44 1s1g_A Potassium voltage-gated 96.1 0.0036 1.2E-07 46.7 3.3 93 187-294 12-110 (124)
45 1t1d_A Protein (potassium chan 95.8 0.0076 2.6E-07 43.1 3.8 89 190-290 3-95 (100)
46 1nn7_A Potassium channel KV4.2 95.4 0.0032 1.1E-07 45.6 0.3 86 190-290 2-92 (105)
47 2nz0_B Potassium voltage-gated 95.1 0.02 6.7E-07 43.6 4.1 85 186-285 33-121 (140)
48 2vkp_A BTB/POZ domain-containi 88.9 0.2 7E-06 35.8 2.3 30 297-326 77-106 (109)
49 2yy9_A Zinc finger and BTB dom 87.2 0.5 1.7E-05 35.4 3.6 34 297-332 87-120 (135)
50 2z8h_A Transcription regulator 86.3 0.35 1.2E-05 36.4 2.3 33 297-331 101-133 (138)
51 2q81_A MIZ-1 protein; BTB/POZ 84.9 0.81 2.8E-05 33.3 3.6 30 297-326 88-117 (119)
52 3b84_A Zinc finger and BTB dom 84.5 0.82 2.8E-05 33.3 3.5 30 297-326 86-115 (119)
53 1r29_A B-cell lymphoma 6 prote 83.8 0.91 3.1E-05 33.4 3.6 30 297-326 95-124 (127)
54 2vpk_A Myoneurin; transcriptio 83.6 1 3.4E-05 32.6 3.7 30 297-326 86-115 (116)
55 2if5_A Zinc finger and BTB dom 82.2 1.4 4.6E-05 32.0 4.0 29 297-325 91-119 (120)
56 2ppi_A Gigaxonin; BTB domain, 81.6 1.1 3.8E-05 33.9 3.4 30 297-326 115-144 (144)
57 1buo_A POZ domain, protein (pr 78.2 1.7 6E-05 31.5 3.4 30 297-326 89-118 (121)
58 2eqx_A Kelch repeat and BTB do 76.7 1.4 4.9E-05 31.3 2.4 31 267-297 10-40 (105)
59 3m5b_A Zinc finger and BTB dom 76.5 2.4 8E-05 30.9 3.6 30 297-326 87-116 (119)
60 2r9r_B Paddle chimera voltage 74.8 2.5 8.4E-05 39.5 4.1 83 188-285 52-140 (514)
61 4eoz_A Speckle-type POZ protei 73.5 2.2 7.4E-05 32.0 2.9 30 297-326 91-120 (145)
62 3htm_A Speckle-type POZ protei 70.0 2.4 8.1E-05 32.8 2.4 31 268-298 135-165 (172)
63 2ast_A S-phase kinase-associat 66.8 4.2 0.00014 31.3 3.2 38 287-326 86-123 (159)
64 3ga1_A Nucleus accumbens-assoc 65.3 1.1 3.8E-05 33.1 -0.4 31 296-326 95-125 (129)
65 2ihc_A Transcription regulator 62.6 0.73 2.5E-05 33.8 -1.9 30 297-326 94-123 (124)
66 1fs1_B SKP1, cyclin A/CDK2-ass 60.7 8.6 0.00029 28.8 3.9 38 287-326 81-118 (141)
67 3v0r_A Major allergen ALT A 1; 58.8 1.9 6.5E-05 31.6 -0.1 30 16-47 9-38 (133)
68 3hqi_A Speckle-type POZ protei 57.8 5.1 0.00017 34.4 2.4 31 268-298 275-305 (312)
69 3ohu_A Transcription regulator 51.7 1 3.5E-05 33.0 -2.7 29 297-325 97-125 (125)
70 3hve_A Gigaxonin; ubiquitin, c 48.5 7.3 0.00025 32.3 1.9 30 297-326 99-128 (256)
71 2plx_B Peptide inhibitor; heli 46.6 20 0.00068 17.3 2.4 22 304-325 3-24 (26)
72 2p1m_A SKP1-like protein 1A; F 42.4 9.7 0.00033 29.2 1.5 30 297-326 93-122 (160)
73 3i3n_A Kelch-like protein 11; 42.1 13 0.00046 31.2 2.5 30 297-326 107-136 (279)
74 2cmy_B Beta trypsin, veronica 29.6 38 0.0013 17.4 2.0 23 304-326 8-30 (34)
75 3v7d_A Suppressor of kinetocho 23.9 1.1E+02 0.0037 23.5 4.8 30 297-326 101-130 (169)
No 1
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=100.00 E-value=2.5e-60 Score=425.32 Aligned_cols=300 Identities=33% Similarity=0.583 Sum_probs=252.7
Q ss_pred ecceeeEEEEEEcccccccCCCCCCeeeeccceecCe---eEEEEEEcCCCCCCCCCceEEEEEEec-CCCceEEEEEEE
Q 019649 14 NETVNGSHQFTVKGYSLAKGMGPGKCLSSDVFTVGGY---DWAIYFYPDGKNPEDGALYVSVFIALA-SEGTDVRALFEL 89 (337)
Q Consensus 14 ~~~~~~~~~w~I~~fs~~~~~~~~~~~~S~~f~~~g~---~W~l~~~p~g~~~~~~~~~lsl~l~~~-~~~~~~~~~~~~ 89 (337)
+++.+++|+|+|+||+.++ .+.|+.++||+|.+||+ +|+|.+||+|++.+.++ |+|+||.|. ...|++.|+|++
T Consensus 2 s~~~~~~~~w~I~nfs~~~-~~~~~~i~S~~F~~gg~~~~~W~i~~yP~G~~~~~~~-~lslyL~~~~~~~~~v~a~~~~ 79 (312)
T 3hqi_A 2 SKVVKFSYMWTINNFSFCR-EEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKD-YLSLYLLLVSCPKSEVRAKFKF 79 (312)
T ss_dssp EEEEEEEEEEEETTGGGCC-CCTTCCEECCCBCC--CCCCEEEEEEETTCCC--CTT-EEEEEEEEEECCC-CEEEEEEE
T ss_pred CceEEEEEEEEEcCcchhh-hcCCCeEeeCCcccCCCCCceEEEEEECCCCCccCCC-cEEEEEEEcCCCCCcEEEEEEE
Confidence 4578899999999999986 57789999999999995 99999999998776666 999999997 468999999999
Q ss_pred EEeecCCCCccceecccccccccCcccccccCcccCccceeeccccc--cCCCcCCCeEEEEEecceeccccC---CCCC
Q 019649 90 TLVDQSGKGKHKVHSHFDRALESGPYTLKYRGSMWGYKRFFKRTSLE--TSDYIKDDCLLINCTVGVVRNRLE---GPKQ 164 (337)
Q Consensus 90 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~fi~~~~L~--~~~~l~dd~l~i~~~v~i~~~~~~---~~~~ 164 (337)
+|+|++|+....... ...+.|. ++.+|||++|++|++|+ .+||+.||+++|+|+|.|...... ....
T Consensus 80 ~l~~~~~~~~~~~~~-------~~~~~F~-~~~~wG~~~Fi~~~~L~~~~~~yl~dD~l~i~~~v~v~~~~~~~~~~~~~ 151 (312)
T 3hqi_A 80 SILNAKGEETKAMES-------QRAYRFV-QGKDWGFKKFIRRGFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTM 151 (312)
T ss_dssp EEECTTSCEEEEEEC-------SSCEEEC-TTCEEEEEEEEEHHHHTCGGGCCCGGGCEEEEEEEEEEEECCCEECCCCC
T ss_pred EEEeCCCCccccccc-------CCceeCC-CCCCcCHHHhccHHHhhccccCeecCCEEEEEEEEEEEeccccccccccc
Confidence 999999875433211 1234554 34689999999999995 568999999999999999964322 1223
Q ss_pred ccccCCCCchhhhHHHhhhcCCCCCeEEEeCCeEEeeehHHHHhcCHHHHHHhcccccCCCCCcEEecCCCHHHHHHHhh
Q 019649 165 YSIPVPPSDMGQGLKDLLESEIGCDIVFEVGDETFKAHKLILAARSPVFRAQFYGLVGDRNLDKVVVKDVEPSIFKAMLL 244 (337)
Q Consensus 165 ~~~~~p~~~~~~~~~~~~~~~~~~Dv~~~v~~~~~~~hk~iLa~~S~~F~~~~~~~~~e~~~~~i~l~~~~~~~f~~~L~ 244 (337)
..+..|++.+.+++.+++.++.++||+|.|+|++|+|||.|||+|||||++||.+++.|+...+|.++++++++|+.+|+
T Consensus 152 ~~~~~p~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~~Hk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~L~ 231 (312)
T 3hqi_A 152 NMVKVPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMC 231 (312)
T ss_dssp SSCCCCCCCHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHTTC-----CCSEEEECSSCHHHHHHHHH
T ss_pred cccCCCCchHHHHHHHHHhCCCCCceEEEECCEEEeHHHHHHHHcCHHHHHHhccCccccCCceEEecCCCHHHHHHHHH
Confidence 45677889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccCCCCCcccccCCCCccchHHHHHHHHHHhhccChhHHHHHHHHHHhccCChhhHHHHHHHHHhCCChHHHHHHHHh
Q 019649 245 FIYTDKFPDVYEITGTTSMCTTTNMVQHLLAAADLYNVDRLKLLCESKLCEELNAETVATTLALAEQHQCPQLKAICLKF 324 (337)
Q Consensus 245 ~iYt~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~ce~~l~~~~~~~n~~~~l~~A~~~~~~~L~~~~~~~ 324 (337)
||||+.++... +++.+||.+|++|+++.|+..|+++|.+.++.+|+..++.+|++|++..|++.|++|
T Consensus 232 ~iYt~~~~~~~------------~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~~~~n~~~~l~~A~~~~~~~L~~~~~~~ 299 (312)
T 3hqi_A 232 FIYTGKAPNLD------------KMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDF 299 (312)
T ss_dssp HHHHSCCTTHH------------HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCTTTHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred hhcCCCCCChH------------HHHHHHHHHHHHhCHHHHHHHHHHHHHccCCHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 99999998765 799999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcCChHhhhcC
Q 019649 325 AATPANLGGACCS 337 (337)
Q Consensus 325 i~~~~~~~~i~~s 337 (337)
|+ .|+.++++|
T Consensus 300 i~--~~~~~v~~s 310 (312)
T 3hqi_A 300 IN--YHATDVLET 310 (312)
T ss_dssp HH--HTC------
T ss_pred HH--HHHHHHhhC
Confidence 99 999998865
No 2
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=100.00 E-value=4.7e-33 Score=227.13 Aligned_cols=158 Identities=39% Similarity=0.610 Sum_probs=146.3
Q ss_pred cccCCCCchhhhHHHhhhcCCCCCeEEEeCCeEEeeehHHHHhcCHHHHHHhcccccCCCCCcEEecCCCHHHHHHHhhh
Q 019649 166 SIPVPPSDMGQGLKDLLESEIGCDIVFEVGDETFKAHKLILAARSPVFRAQFYGLVGDRNLDKVVVKDVEPSIFKAMLLF 245 (337)
Q Consensus 166 ~~~~p~~~~~~~~~~~~~~~~~~Dv~~~v~~~~~~~hk~iLa~~S~~F~~~~~~~~~e~~~~~i~l~~~~~~~f~~~L~~ 245 (337)
.+..|++.+..++.+++.++.++||+|.++|++|+|||.||+++|+||++||.+++.|+....|.++++++++|+.+|+|
T Consensus 13 ~~~~p~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~l~~ 92 (172)
T 3htm_A 13 MVKVPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCF 92 (172)
T ss_dssp CSCCCCCCHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSCCCGGGTTEEEECSSCHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHhCCCCcceEEEECCEEEEeeHHHHHHcCHHHHHHHccCccccCCCeEEecCCCHHHHHHHHHH
Confidence 45678889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCCCCCcccccCCCCccchHHHHHHHHHHhhccChhHHHHHHHHHHhccCChhhHHHHHHHHHhCCChHHHHHHHHhc
Q 019649 246 IYTDKFPDVYEITGTTSMCTTTNMVQHLLAAADLYNVDRLKLLCESKLCEELNAETVATTLALAEQHQCPQLKAICLKFA 325 (337)
Q Consensus 246 iYt~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~ce~~l~~~~~~~n~~~~l~~A~~~~~~~L~~~~~~~i 325 (337)
+|++.++... +++.+|+.+|++|+++.|+..|+++|.+.++.+|+..++.+|.+|++..|++.|++||
T Consensus 93 ~Yt~~~~~~~------------~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~~~~A~~~~~~~L~~~~~~~i 160 (172)
T 3htm_A 93 IYTGKAPNLD------------KMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFI 160 (172)
T ss_dssp HHHSCCTTGG------------GTHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTTHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HhCCCCCCcH------------HHHHHHHHHHHHhCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 9999998765 6899999999999999999999999999999999999999999999999999999999
Q ss_pred cCcCChHhhhcC
Q 019649 326 ATPANLGGACCS 337 (337)
Q Consensus 326 ~~~~~~~~i~~s 337 (337)
. +|+.++++|
T Consensus 161 ~--~~~~~v~~s 170 (172)
T 3htm_A 161 N--YHATDVLET 170 (172)
T ss_dssp H--HTC------
T ss_pred H--HHHHHHHcC
Confidence 9 999998764
No 3
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.97 E-value=5e-31 Score=208.97 Aligned_cols=142 Identities=43% Similarity=0.677 Sum_probs=109.1
Q ss_pred cccCCCCchhhhHHHhhhcCCCCCeEEEeCCeEEeeehHHHHhcCHHHHHHhcccccCCCCCcEEecCCCHHHHHHHhhh
Q 019649 166 SIPVPPSDMGQGLKDLLESEIGCDIVFEVGDETFKAHKLILAARSPVFRAQFYGLVGDRNLDKVVVKDVEPSIFKAMLLF 245 (337)
Q Consensus 166 ~~~~p~~~~~~~~~~~~~~~~~~Dv~~~v~~~~~~~hk~iLa~~S~~F~~~~~~~~~e~~~~~i~l~~~~~~~f~~~L~~ 245 (337)
.++.|++.+..++.+++.++.++||+|.++|+.|+|||.||+++|+||++||.+++.|+....|.++++++++|+.+|+|
T Consensus 4 ~v~~p~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~~~~~l~~ 83 (145)
T 4eoz_A 4 MVKVPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCF 83 (145)
T ss_dssp -CCCCCCCHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSSSHHHHHTEEEECSSCHHHHHHHHHH
T ss_pred cccCChHHHHHHHHHHHhCCCCcceEEEECCEEEEeehHHHHHcCHHHHHHHcCCCcCCCCceEEecCCCHHHHHHHHHh
Confidence 46778899999999999999999999999999999999999999999999999999888888999999999999999999
Q ss_pred hccCCCCCcccccCCCCccchHHHHHHHHHHhhccChhHHHHHHHHHHhccCChhhHHHHHHHHHhCCChHHHH
Q 019649 246 IYTDKFPDVYEITGTTSMCTTTNMVQHLLAAADLYNVDRLKLLCESKLCEELNAETVATTLALAEQHQCPQLKA 319 (337)
Q Consensus 246 iYt~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~ce~~l~~~~~~~n~~~~l~~A~~~~~~~L~~ 319 (337)
+||+.++... +++.+|+.+|++|+++.|+..|+++|.+.++.+|+..++.+|++|++.+|++
T Consensus 84 ~Y~~~~~~~~------------~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~l~~A~~~~~~~Lk~ 145 (145)
T 4eoz_A 84 IYTGKAPNLD------------KMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKT 145 (145)
T ss_dssp HHHSCCTTGG------------GTHHHHHHHHHHTTCHHHHHHHHCC---------------------------
T ss_pred hccCccCCcH------------HHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHhcC
Confidence 9999998765 6899999999999999999999999999999999999999999999999874
No 4
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=99.96 E-value=7.7e-30 Score=221.26 Aligned_cols=154 Identities=19% Similarity=0.253 Sum_probs=135.0
Q ss_pred CCCchhhhHHHhhhcCCCCCeEEEeCCeEEeeehHHHHhcCHHHHHHhccccc--CCCCCcEEecCCCHHHHHHHhhhhc
Q 019649 170 PPSDMGQGLKDLLESEIGCDIVFEVGDETFKAHKLILAARSPVFRAQFYGLVG--DRNLDKVVVKDVEPSIFKAMLLFIY 247 (337)
Q Consensus 170 p~~~~~~~~~~~~~~~~~~Dv~~~v~~~~~~~hk~iLa~~S~~F~~~~~~~~~--e~~~~~i~l~~~~~~~f~~~L~~iY 247 (337)
.+..+.+++++++.++.++||+|.|+|++|+|||.||+++||||++||.+++. ++....|.++++++++|+.+|+|+|
T Consensus 14 ~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~~~i~l~~v~~~~f~~ll~~~Y 93 (256)
T 3hve_A 14 HAARLLRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMREILDYIF 93 (256)
T ss_dssp THHHHHHHHHTCCC--CCCCEEEEETTEEEEECHHHHHTTCHHHHHTC-----------CEEECSSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCcceEEEECCEEEechHHHHHHcCHHHHHHhCCCCCcccCCCCeEEeCCCCHHHHHHHHhhcc
Confidence 34568899999999999999999999999999999999999999999998887 6677889999999999999999999
Q ss_pred cCCCCCcccccCCCCccchHHHHHHHHHHhhccChhHHHHHHHHHHhccCChhhHHHHHHHHHhCCChHHHHHHHHhccC
Q 019649 248 TDKFPDVYEITGTTSMCTTTNMVQHLLAAADLYNVDRLKLLCESKLCEELNAETVATTLALAEQHQCPQLKAICLKFAAT 327 (337)
Q Consensus 248 t~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~ce~~l~~~~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~ 327 (337)
|+.+.+.. +++.+++.+|++|+++.|+..|+++|.+.++..|++.++.+|+.|++..|++.|.+||.
T Consensus 94 t~~~~i~~------------~~v~~ll~~A~~l~i~~l~~~c~~~L~~~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~- 160 (256)
T 3hve_A 94 SGQIRLNE------------DTIQDVVQAADLLLLTDLKTLCCEFLEGCIAAENCIGIRDFALHYCLHHVHYLATEYLE- 160 (256)
T ss_dssp HSCCCCC-------------CCHHHHHHHHHHHTCHHHHHHHHHHHHHTCCSSTTHHHHHHHHHTTCHHHHHHHHHHHH-
T ss_pred CCCCcccH------------hHHHHHHHHHHHHChHHHHHHHHHHHHhhCCHhhHHHHHHHHHHcCcHHHHHHHHHHHH-
Confidence 99998775 68999999999999999999999999999999999999999999999999999999999
Q ss_pred cCChHhhhcC
Q 019649 328 PANLGGACCS 337 (337)
Q Consensus 328 ~~~~~~i~~s 337 (337)
.||.++.++
T Consensus 161 -~~f~~v~~~ 169 (256)
T 3hve_A 161 -THFRDVSST 169 (256)
T ss_dssp -HHHHHHTTC
T ss_pred -HHHHHHhCC
Confidence 999988753
No 5
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=99.95 E-value=5.2e-29 Score=218.74 Aligned_cols=153 Identities=22% Similarity=0.325 Sum_probs=136.7
Q ss_pred CCchhhhHHHhhhcCCCCCeEEEeC---CeEEeeehHHHHhcCHHHHHHhcccccCCCCCcEEec------CCCHHHHHH
Q 019649 171 PSDMGQGLKDLLESEIGCDIVFEVG---DETFKAHKLILAARSPVFRAQFYGLVGDRNLDKVVVK------DVEPSIFKA 241 (337)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~Dv~~~v~---~~~~~~hk~iLa~~S~~F~~~~~~~~~e~~~~~i~l~------~~~~~~f~~ 241 (337)
+..+.+.+++++.++.++||+|.|+ |++|+|||.||+++|+||++||.++++|+....|.++ ++++++|+.
T Consensus 16 ~~~ll~~l~~l~~~~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~~~~~i~l~~~~~~~~v~~~~f~~ 95 (279)
T 3i3n_A 16 CSELSWRQNEQRRQGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVEMRKWSSEPGPEPDTVEA 95 (279)
T ss_dssp HHHHHHHHHHHHHHTTTCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC--------EEECCCCSSTTCSCHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCccccCCeEEeccccccCCCCHHHHHH
Confidence 4567888999999999999999998 9999999999999999999999999999999999998 899999999
Q ss_pred HhhhhccCCCCCcccccCCCCccchHHHHHHHHHHhhccChhHHHHHHHHHHhccCChhhHHHHHHHHHhCCChHHHHHH
Q 019649 242 MLLFIYTDKFPDVYEITGTTSMCTTTNMVQHLLAAADLYNVDRLKLLCESKLCEELNAETVATTLALAEQHQCPQLKAIC 321 (337)
Q Consensus 242 ~L~~iYt~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~ce~~l~~~~~~~n~~~~l~~A~~~~~~~L~~~~ 321 (337)
+|+|+||+.+.+.. +++.+|+.+|++|+++.|+..|+++|.+.++..||..++.+|..|++..|++.|
T Consensus 96 ll~~~Ytg~~~i~~------------~~v~~ll~~A~~l~i~~L~~~c~~~L~~~l~~~n~~~i~~~A~~~~~~~L~~~~ 163 (279)
T 3i3n_A 96 VIEYMYTGRIRVST------------GSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIHSLAHMYTLSQLALKA 163 (279)
T ss_dssp HHHHHHHSEEEEET------------TTHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTTHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHhhCcCCcccCH------------HHHHHHHHHHHHHCcHHHHHHHHHHHHHcCCcchHHHHHHHHHHcCcHHHHHHH
Confidence 99999999998765 689999999999999999999999999999999999999999999999999999
Q ss_pred HHhccCcCChHhhhcC
Q 019649 322 LKFAATPANLGGACCS 337 (337)
Q Consensus 322 ~~~i~~~~~~~~i~~s 337 (337)
.+||. .||.+++.+
T Consensus 164 ~~~i~--~~f~~v~~~ 177 (279)
T 3i3n_A 164 ADMIR--RNFHKVIQD 177 (279)
T ss_dssp HHHHH--HTHHHHTTS
T ss_pred HHHHH--HHHHHHhcC
Confidence 99999 999988653
No 6
>3ivv_A Speckle-type POZ protein; protein binding, nucleus, UBL conjugation pathway, ligase; 1.25A {Homo sapiens} SCOP: b.8.1.1 PDB: 3ivq_A 3ivb_A 3hsv_A 3hqh_A 3hqm_A 3hql_A 2cr2_A
Probab=99.94 E-value=4.9e-27 Score=185.56 Aligned_cols=133 Identities=29% Similarity=0.615 Sum_probs=110.5
Q ss_pred ecceeeEEEEEEcccccccCCCCCCeeeeccceecCe---eEEEEEEcCCCCCCCCCceEEEEEEecC-CCceEEEEEEE
Q 019649 14 NETVNGSHQFTVKGYSLAKGMGPGKCLSSDVFTVGGY---DWAIYFYPDGKNPEDGALYVSVFIALAS-EGTDVRALFEL 89 (337)
Q Consensus 14 ~~~~~~~~~w~I~~fs~~~~~~~~~~~~S~~f~~~g~---~W~l~~~p~g~~~~~~~~~lsl~l~~~~-~~~~~~~~~~~ 89 (337)
-++..++|+|+|+||+.+++ +.|+.++||+|.+||+ +|+|.+||+|++...++ |||+||.|.. ..|++.|+|+|
T Consensus 6 ~~~~~~~~~w~I~~fs~~~~-~~g~~~~S~~F~~gg~~g~~W~i~~yP~G~~~~~~~-~lSlyL~l~~~~~w~v~a~f~l 83 (145)
T 3ivv_A 6 GKVVKFSYMWTINNFSFCRE-EMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKD-YLSLYLLLVSCPKSEVRAKFKF 83 (145)
T ss_dssp CCCCEEEEEEEESSGGGCCC-CTTCCEECCCEEESGGGCEEEEEEEETTCSSGGGTT-EEEEEEEEEECSSSEEEEEEEE
T ss_pred CcEEEEEEEEEEcCchHHhh-cCCCEEECCCcCCCCcCCceEEEEEEcCCCCCCCCC-eEEEEEEEcCCCCCcEEEEEEE
Confidence 35678999999999999875 6788999999999996 99999999998765555 9999999984 47999999999
Q ss_pred EEeecCCCCccceecccccccccCcccccccCcccCccceeecccc--ccCCCcCCCeEEEEEecceec
Q 019649 90 TLVDQSGKGKHKVHSHFDRALESGPYTLKYRGSMWGYKRFFKRTSL--ETSDYIKDDCLLINCTVGVVR 156 (337)
Q Consensus 90 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~fi~~~~L--~~~~~l~dd~l~i~~~v~i~~ 156 (337)
+|+||.++....... ...+.|. ...+|||++||+|++| ++++||.||+|+|+|+|.|..
T Consensus 84 ~llnq~~~~~~~~~~-------~~~~~F~-~~~~wG~~~Fi~~~~L~~~~~~yl~dD~l~I~~~V~V~~ 144 (145)
T 3ivv_A 84 SILNAKGEETKAMES-------QRAYRFV-QGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQ 144 (145)
T ss_dssp EEECTTSCEEEEEEC-------SSCEEEE-TTCEEEEEEEEEHHHHHCGGGCSSGGGCEEEEEEEEECC
T ss_pred EEEecCCCceeeecc-------cceEEec-CCCCcCHHHeEEhhhhccccCCcEeCCEEEEEEEEEEEe
Confidence 999998764322111 1134554 4678999999999999 468999999999999999875
No 7
>4ghu_A TNF receptor-associated factor 3; alpha/beta, innate immunity, IFN pathway, immune system; 2.20A {Mus musculus} PDB: 2gkw_A 1kzz_A 1l0a_A 1zms_A 1rf3_A
Probab=99.93 E-value=1.9e-26 Score=190.43 Aligned_cols=140 Identities=25% Similarity=0.323 Sum_probs=110.7
Q ss_pred ceeeEEEEEEcccccccC---CCCCCeeeeccceec--CeeEEEEEEcCCCCCCCCCceEEEEEEecC------CCceEE
Q 019649 16 TVNGSHQFTVKGYSLAKG---MGPGKCLSSDVFTVG--GYDWAIYFYPDGKNPEDGALYVSVFIALAS------EGTDVR 84 (337)
Q Consensus 16 ~~~~~~~w~I~~fs~~~~---~~~~~~~~S~~f~~~--g~~W~l~~~p~g~~~~~~~~~lsl~l~~~~------~~~~~~ 84 (337)
+..++|+|+|+||+.+++ ++.|++++||+|.+| |++|+|.+||+|++.+.++ |||+||.+.+ ..|++.
T Consensus 37 ~~~g~~~w~I~nfS~~~~~~~~~~g~~i~S~~F~vg~~Gy~W~i~~yPnG~~~~~~~-~lSlyL~l~~g~~D~~l~wp~~ 115 (198)
T 4ghu_A 37 SYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGT-HLSLFFVIMRGEYDALLPWPFK 115 (198)
T ss_dssp CSSSEEEEEECCHHHHHHHHHTTSSCCEECCCEESSTTSCEEEEEEETTCCGGGTTT-EEEEEEEEECCTTGGGSCSSCC
T ss_pred ccccEEEEEECCHHHHHhhhccCCCcEEECCCeEECCCCcEEEEEEEeCCCCCCCCC-eEEEEEEecCCccCCCCCceEE
Confidence 467999999999998876 678899999999999 9999999999998876666 9999999873 279999
Q ss_pred EEEEEEEeecCCCCccceecccc-cccccCcccccccCcccCccceeeccccccCCCcCCCeEEEEEecceec
Q 019649 85 ALFELTLVDQSGKGKHKVHSHFD-RALESGPYTLKYRGSMWGYKRFFKRTSLETSDYIKDDCLLINCTVGVVR 156 (337)
Q Consensus 85 ~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~G~~~fi~~~~L~~~~~l~dd~l~i~~~v~i~~ 156 (337)
++|+|+|+||.++.......... .....-...+...+.+|||++||++++|+++|||.||+++|+|+|.+..
T Consensus 116 a~~~l~Lldq~~~~~~~~~~~~~~~~~~~f~rp~~~~~~~wG~~~Fi~~~~L~~~gyL~dD~l~I~~~V~v~~ 188 (198)
T 4ghu_A 116 QKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQTVLENGTYIKDDTIFIKVIVDTSD 188 (198)
T ss_dssp CCEEEEECCCSTTCCCEEEEECCCTTSGGGSCCSSSBCCCEEEEEEEEHHHHHHTTSCBTTBEEEEEEECCTT
T ss_pred EEEEEEEEcCCCCccceEEEeecCcccceecCCcccCcCCcCchhEeEHHHhhhcCCeeCCEEEEEEEEEecc
Confidence 99999999998754322211000 0000000112234678999999999999988999999999999999886
No 8
>4gjh_A TNF receptor-associated factor 5; TRAF domain, immune system; 2.81A {Mus musculus}
Probab=99.93 E-value=2.7e-26 Score=187.17 Aligned_cols=138 Identities=27% Similarity=0.423 Sum_probs=109.8
Q ss_pred cceeeEEEEEEcccccccC---CCCCCeeeeccceec--CeeEEEEEEcCCCCCCCCCceEEEEEEecC------CCceE
Q 019649 15 ETVNGSHQFTVKGYSLAKG---MGPGKCLSSDVFTVG--GYDWAIYFYPDGKNPEDGALYVSVFIALAS------EGTDV 83 (337)
Q Consensus 15 ~~~~~~~~w~I~~fs~~~~---~~~~~~~~S~~f~~~--g~~W~l~~~p~g~~~~~~~~~lsl~l~~~~------~~~~~ 83 (337)
.+..++|+|+|+||+.+++ ++.|..++||+|.+| |++|+|.+||+|++.+.++ |||+||+|.. ..|++
T Consensus 20 ~~~~g~~~w~I~~fS~~~~~~~~g~~~~i~S~~F~~g~~G~~W~i~~yP~G~~~~~~~-~lSlyL~l~~~~~d~~l~W~v 98 (178)
T 4gjh_A 20 ACYSGKLIWKVTDYRVKKREAVEGHTVSVFSQPFYTSRCGYRLCARAYLNGDGSGKGT-HLSLYFVVMRGEFDSLLQWPF 98 (178)
T ss_dssp CCSSSEEEEEECCHHHHHHHHHTTSCCCEECCCEESSTTSCEEEEEEETTCCGGGTTT-EEEEEEEEBCCTTGGGSCSSC
T ss_pred cccceEEEEEECCHHHHHhhhhcCCCcEEECCCeEeCCCCeEEEEEEEECCCCCCCCC-EEEEEEEEecCCCCcccCCce
Confidence 3568999999999998876 566669999999999 9999999999998766656 9999999963 26999
Q ss_pred EEEEEEEEeecCCCCccceecccccccccCccccc----ccCcccCccceeecccccc--CCCcCCCeEEEEEecceec
Q 019649 84 RALFELTLVDQSGKGKHKVHSHFDRALESGPYTLK----YRGSMWGYKRFFKRTSLET--SDYIKDDCLLINCTVGVVR 156 (337)
Q Consensus 84 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~G~~~fi~~~~L~~--~~~l~dd~l~i~~~v~i~~ 156 (337)
.|+|+|+|+||.++......+ + +.....+.|. ..+.+|||++||++++|++ ++||.||+++|+|+|.|.+
T Consensus 99 ~a~~~l~Lldq~~~~~~~~~~-~--~~~~~~~~F~~p~~~~~~~wG~~~Fi~~~~L~~~~~~yL~dD~l~I~~~V~i~~ 174 (178)
T 4gjh_A 99 RQRVTLMLLDQSGKKNHIVET-F--KADPNSSSFKRPDGEMNIASGCPRFVSHSTLENSKNTYIKDDTLFLKVAVDLTD 174 (178)
T ss_dssp CCEEEEEECCTTSSCCCEEEE-E--ECCTTCGGGSCCSSSBCCCEEEEEEEEHHHHHCTTCCSSBTTBEEEEEEECCTT
T ss_pred EEEEEEEEEcCCCCcceeEEe-e--ccCCccccccCCcccccCCcChhheeEHHHhhccccCcCcCCEEEEEEEEEecC
Confidence 999999999999765322211 0 0001123443 2356899999999999986 8999999999999998765
No 9
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.93 E-value=3.6e-26 Score=174.81 Aligned_cols=111 Identities=25% Similarity=0.352 Sum_probs=100.7
Q ss_pred CCchhhhHHHhhhcCCCCCeEEEeCCeEEeeehHHHHhcCHHHHHHhcccccCCCCCcEEecCCCHHHHHHHhhhhccCC
Q 019649 171 PSDMGQGLKDLLESEIGCDIVFEVGDETFKAHKLILAARSPVFRAQFYGLVGDRNLDKVVVKDVEPSIFKAMLLFIYTDK 250 (337)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~Dv~~~v~~~~~~~hk~iLa~~S~~F~~~~~~~~~e~~~~~i~l~~~~~~~f~~~L~~iYt~~ 250 (337)
++.+.+.+++++.++.++||+|.++|++|+|||.||+++||||++||.+++.|+....|.++++++++|+.+|+|+||+.
T Consensus 9 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~ll~~~Yt~~ 88 (120)
T 2if5_A 9 SSDILSGLNEQRTQGLLCDVVILVEGREFPTHRSVLAACSQYFKKLFTSGAVVDQQNVYEIDFVSAEALTALMDFAYTAT 88 (120)
T ss_dssp HHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHC-----CCSEEECCSSCHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHhcCCCCCeEEEECCEEEeHHHHHHHHhCHHHHHHhcCCccccCCceEEeCCCCHHHHHHHHHHHcCCC
Confidence 35678889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCCCccchHHHHHHHHHHhhccChhHHHHHHHHHH
Q 019649 251 FPDVYEITGTTSMCTTTNMVQHLLAAADLYNVDRLKLLCESKL 293 (337)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~ce~~l 293 (337)
++... +++.+|+.+|++|+++.|+..|+++|
T Consensus 89 ~~~~~------------~~~~~ll~~A~~~~i~~L~~~C~~~L 119 (120)
T 2if5_A 89 LTVST------------ANVGDILSAARLLEIPAVSHVCADLL 119 (120)
T ss_dssp CCCCG------------GGHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CccCH------------HHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 98775 68999999999999999999999987
No 10
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.93 E-value=2.5e-25 Score=171.80 Aligned_cols=114 Identities=25% Similarity=0.366 Sum_probs=106.4
Q ss_pred CCCchhhhHHHhhhcCCCCCeEEEeCCeEEeeehHHHHhcCHHHHHHhcccccCCCCCcEEe-cCCCHHHHHHHhhhhcc
Q 019649 170 PPSDMGQGLKDLLESEIGCDIVFEVGDETFKAHKLILAARSPVFRAQFYGLVGDRNLDKVVV-KDVEPSIFKAMLLFIYT 248 (337)
Q Consensus 170 p~~~~~~~~~~~~~~~~~~Dv~~~v~~~~~~~hk~iLa~~S~~F~~~~~~~~~e~~~~~i~l-~~~~~~~f~~~L~~iYt 248 (337)
.+..+.+++++++.++.++||+|.++|++|+|||.||+++||||++||.+++.| ....|.+ +++++++|+.+|+|+||
T Consensus 12 ~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~iLaa~S~~F~~~f~~~~~e-~~~~i~l~~~~~~~~f~~ll~~~Yt 90 (127)
T 1r29_A 12 HASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKR-NLSVINLDPEINPEGFNILLDFMYT 90 (127)
T ss_dssp HHHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTSTTTT-TCSEEECCTTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEECCEEEehHHHHHHHhCHHHHHHhcCCccC-CCCEEEeCCCCCHHHHHHHHHHHcC
Confidence 345688899999999999999999999999999999999999999999999988 7788999 99999999999999999
Q ss_pred CCCCCcccccCCCCccchHHHHHHHHHHhhccChhHHHHHHHHHHhcc
Q 019649 249 DKFPDVYEITGTTSMCTTTNMVQHLLAAADLYNVDRLKLLCESKLCEE 296 (337)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~ce~~l~~~ 296 (337)
+.+++.. +++.+|+.+|++|+++.|++.|+++|.++
T Consensus 91 g~~~~~~------------~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 126 (127)
T 1r29_A 91 SRLNLRE------------GNIMAVMATAMYLQMEHVVDTCRKFIKAS 126 (127)
T ss_dssp SCCCCCT------------TTHHHHHHHHHHTTCHHHHHHHHHHHHTC
T ss_pred CCcCcCH------------HHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 9998775 68999999999999999999999999763
No 11
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.93 E-value=1.3e-25 Score=168.65 Aligned_cols=104 Identities=35% Similarity=0.518 Sum_probs=91.9
Q ss_pred hhhcCCCCCeEEEeCC----eEEeeehHHHHhcCHHHHHHhcccccCCCCCcEEecCCCHHHHHHHhhhhccCCCCCccc
Q 019649 181 LLESEIGCDIVFEVGD----ETFKAHKLILAARSPVFRAQFYGLVGDRNLDKVVVKDVEPSIFKAMLLFIYTDKFPDVYE 256 (337)
Q Consensus 181 ~~~~~~~~Dv~~~v~~----~~~~~hk~iLa~~S~~F~~~~~~~~~e~~~~~i~l~~~~~~~f~~~L~~iYt~~~~~~~~ 256 (337)
++.++.++||+|.+++ +.|+|||.||+++||||++||.+++.|+. ..|.++++++++|+.+|+|+||+.++...
T Consensus 2 l~~~~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~~-~~i~l~~~~~~~f~~~l~~iYt~~~~~~~- 79 (109)
T 2vkp_A 2 MFNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEVK-SEIHIPDVEPAAFLILLKYMYSDEIDLEA- 79 (109)
T ss_dssp CTTCCTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC------C-CEEEETTSCHHHHHHHHHHHHHCCCCCCT-
T ss_pred cccCCCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccCC-CeEEeCCCCHHHHHHHHHHHcCCCccCCH-
Confidence 4668899999999998 89999999999999999999999999988 89999999999999999999999998776
Q ss_pred ccCCCCccchHHHHHHHHHHhhccChhHHHHHHHHHHhccC
Q 019649 257 ITGTTSMCTTTNMVQHLLAAADLYNVDRLKLLCESKLCEEL 297 (337)
Q Consensus 257 ~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~ce~~l~~~~ 297 (337)
+++.+|+.+|++|+++.|+..|+++|.+.+
T Consensus 80 -----------~~~~~ll~~A~~~~~~~L~~~c~~~l~~~l 109 (109)
T 2vkp_A 80 -----------DTVLATLYAAKKYIVPALAKACVNFLETSL 109 (109)
T ss_dssp -----------TTHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred -----------HHHHHHHHHHHHhCcHHHHHHHHHHHHhhC
Confidence 689999999999999999999999998753
No 12
>2foj_A Ubiquitin carboxyl-terminal hydrolase 7; MATH domain, hydrolase; 1.60A {Homo sapiens} PDB: 1yze_A 1yy6_A 2foo_A 2fop_A 3mqr_A 3mqs_C 2f1w_A 2f1x_A 2f1y_A 2xxn_A
Probab=99.92 E-value=4.5e-25 Score=176.36 Aligned_cols=126 Identities=17% Similarity=0.242 Sum_probs=101.0
Q ss_pred eeeEEEEEEcccccccCCCCCCeeeeccceecCeeEEEEEEcCCCCC-CCCCceEEEEEEecC----CCceEEEEEEEEE
Q 019649 17 VNGSHQFTVKGYSLAKGMGPGKCLSSDVFTVGGYDWAIYFYPDGKNP-EDGALYVSVFIALAS----EGTDVRALFELTL 91 (337)
Q Consensus 17 ~~~~~~w~I~~fs~~~~~~~~~~~~S~~f~~~g~~W~l~~~p~g~~~-~~~~~~lsl~l~~~~----~~~~~~~~~~~~i 91 (337)
..++|.|+|+||+.++ +.++||+|.+||++|+|.+||+|++. +.++ +||+||.|.. ..|++.|+|+++|
T Consensus 17 ~~~~~~w~I~nfS~~~-----~~~~S~~f~~gg~~W~i~~yP~G~~~~~~~~-~lSlyL~~~~~~~~~~w~v~a~~~l~l 90 (155)
T 2foj_A 17 SEATFQFTVERFSRLS-----ESVLSPPCFVRNLPWKIMVMPRFYPDRPHQK-SVGFFLQCNAESDSTSWSCHAQAVLKI 90 (155)
T ss_dssp SEEEEEEEESSGGGCC-----SCEECCCEEETTEEEEEEEEEEC------CB-EEEEEEEESTTCCCSSCEEEEEEEEEE
T ss_pred CCcEEEEEECChhhcC-----CceEcCCEEECCccEEEEEEECCCCCCCCCC-EEEEEEEeCCCCCCCCCEEEEEEEEEE
Confidence 4689999999999984 58999999999999999999999765 2344 9999999973 3599999999999
Q ss_pred eecCCCCccceecccccccccCcccccccCcccCccceeeccccc--cCCCcCCCeEEEEEecceec
Q 019649 92 VDQSGKGKHKVHSHFDRALESGPYTLKYRGSMWGYKRFFKRTSLE--TSDYIKDDCLLINCTVGVVR 156 (337)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~fi~~~~L~--~~~~l~dd~l~i~~~v~i~~ 156 (337)
+|+++........ ..+.|.....+|||++||+|++|+ +++||.||+|+|+|+|.|.+
T Consensus 91 ~~~~~~~~~~~~~--------~~~~F~~~~~~wG~~~Fi~~~~L~~~~~~yl~dD~l~Ie~~V~V~~ 149 (155)
T 2foj_A 91 INYRDDEKSFSRR--------ISHLFFHKENDWGFSNFMAWSEVTDPEKGFIDDDKVTFEVFVQADA 149 (155)
T ss_dssp CCSSCGGGCEEEE--------EEEEEETTBCEEEEEEEEEHHHHTCTTTSSCBTTBEEEEEEEEECC
T ss_pred EcCCCCcceEEec--------cEEEeCCCCCCEeECCeEEHHHhcCcCCCceECCEEEEEEEEEEeC
Confidence 9998764221111 124555456789999999999996 68999999999999999964
No 13
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.92 E-value=8.6e-26 Score=176.89 Aligned_cols=119 Identities=23% Similarity=0.337 Sum_probs=108.7
Q ss_pred CCCCchhhhHHHhhhcCCCCCeEEEeCCeEEeeehHHHHhcCHHHHHHhcccccCCCCCcEEec-CCCHHHHHHHhhhhc
Q 019649 169 VPPSDMGQGLKDLLESEIGCDIVFEVGDETFKAHKLILAARSPVFRAQFYGLVGDRNLDKVVVK-DVEPSIFKAMLLFIY 247 (337)
Q Consensus 169 ~p~~~~~~~~~~~~~~~~~~Dv~~~v~~~~~~~hk~iLa~~S~~F~~~~~~~~~e~~~~~i~l~-~~~~~~f~~~L~~iY 247 (337)
.++..+.+.+.+++.++.++||+|.++|++|+|||.||++||+||++||.+++.+. ..|.++ ++++++|+.+|+|+|
T Consensus 18 ~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e~--~~i~l~~~v~~~~~~~lL~~~Y 95 (138)
T 2z8h_A 18 VHSTNVLLSLNDQRKKDVLCDVTVLVEGQRFRAHRSVLAACSSYFHSRIVGQTDAE--LTVTLPEEVTVKGFEPLIQFAY 95 (138)
T ss_dssp SHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTCCCTT--EEEECCTTSCHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHhhCCCcCeEEEECCEEEechHHHHHHcCHHHHHHHhcCCCCC--ceEEeCCCCCHHHHHHHHHHhc
Confidence 34557889999999999999999999999999999999999999999999887663 578895 899999999999999
Q ss_pred cCCCCCcccccCCCCccchHHHHHHHHHHhhccChhHHHHHHHHHHhccCChhh
Q 019649 248 TDKFPDVYEITGTTSMCTTTNMVQHLLAAADLYNVDRLKLLCESKLCEELNAET 301 (337)
Q Consensus 248 t~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~ce~~l~~~~~~~n 301 (337)
|+.+.+.. +++.+|+.+|++|+++.|+..|+++|.+.++..|
T Consensus 96 tg~~~i~~------------~~v~~ll~~A~~~~i~~L~~~C~~~l~~~l~~sn 137 (138)
T 2z8h_A 96 TAKLILSK------------DNVDEVCRCVEFLSVHNIEESCFQFLKFKFLDST 137 (138)
T ss_dssp HSCCCCCT------------TTHHHHHHHHHHHTCGGGHHHHHHHTTCCCSCCC
T ss_pred CCCcccCH------------HHHHHHHHHHHHhCCHHHHHHHHHHHHHhccccc
Confidence 99998776 6899999999999999999999999999888765
No 14
>1lb6_A TNF receptor-associated factor 6; TRAF6-CD40 complex, signaling protein; 1.80A {Homo sapiens} SCOP: b.8.1.1 PDB: 1lb5_A 1lb4_A
Probab=99.92 E-value=3e-25 Score=178.22 Aligned_cols=136 Identities=21% Similarity=0.357 Sum_probs=103.9
Q ss_pred eeeEEEEEEcccccccC-CCCCC--eeeeccceec--CeeEEEEEEcCCCCCCC-CCceEEEEEEecC------CCceEE
Q 019649 17 VNGSHQFTVKGYSLAKG-MGPGK--CLSSDVFTVG--GYDWAIYFYPDGKNPED-GALYVSVFIALAS------EGTDVR 84 (337)
Q Consensus 17 ~~~~~~w~I~~fs~~~~-~~~~~--~~~S~~f~~~--g~~W~l~~~p~g~~~~~-~~~~lsl~l~~~~------~~~~~~ 84 (337)
..++|+|+|+||+.+++ ++.|+ .++||+|.+| |++|+|++||+|++.+. ++ |||+||++.. ..|++.
T Consensus 3 ~~g~~~w~I~~fS~~~~~~~~g~~~~i~S~~F~vg~~Gy~w~i~~yP~G~~~~~~~~-~lSlyL~l~~~~~d~~l~wp~~ 81 (160)
T 1lb6_A 3 CNGIYIWKIGNFGMHLKCQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPTAQRCAN-YISLFVHTMQGEYDSHLPWPFQ 81 (160)
T ss_dssp CCEEEEEEECCHHHHHHHHHTTCCEEEECCCEESSSSCCEEEEEEEECCTTCTTTTT-EEEEEEEEECCTTGGGSCSSCC
T ss_pred cCcEEEEEECCHHHHHHhhhcCCCeEEECcCeecCCCCeeEEEEEEecCCCCCCCCC-EEEEEEEEeecCCCccCCCcee
Confidence 56899999999998865 56677 8999999999 99999999999987553 45 9999999862 249999
Q ss_pred EEEEEEEeecCCCCccceecccccccccC--ccccc-----ccCcccCccceeeccccccCCCcCCCeEEEEEecceec
Q 019649 85 ALFELTLVDQSGKGKHKVHSHFDRALESG--PYTLK-----YRGSMWGYKRFFKRTSLETSDYIKDDCLLINCTVGVVR 156 (337)
Q Consensus 85 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~-----~~~~~~G~~~fi~~~~L~~~~~l~dd~l~i~~~v~i~~ 156 (337)
|+++|+|+||.+.... .. ..+.+.+. ...|. .+..+|||++|+++++|++++||.||+|+|+|+|.+..
T Consensus 82 a~~~l~lldq~~~~~~-~~--~~~~~~~~~~~~~f~~p~~~~~~~~~G~~~Fi~~~~L~~~~yl~dD~l~I~~~V~v~~ 157 (160)
T 1lb6_A 82 GTIRLTILDQSEAPVR-QN--HEEIMDAKPELLAFQRPTIPRNPKGFGYVTFMHLEALRQRTFIKDDTLLVRCEVSTRF 157 (160)
T ss_dssp SEEEEEECCCSCTTSC-CC--EEEEEECCTTSGGGSCCSSSBCSEEEEEEEEEEGGGGGTSCCCBTTBEEEEEEEEC--
T ss_pred eeEEEEEEcCCCcccc-cc--ceEEeecCCcchhccCCcccCCCCCcCEeeEeEHHHhhhCCCccCCEEEEEEEEEEee
Confidence 9999999999865321 00 01111111 11121 12347999999999999989999999999999999875
No 15
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.92 E-value=2.8e-25 Score=169.40 Aligned_cols=109 Identities=28% Similarity=0.269 Sum_probs=99.2
Q ss_pred CchhhhHHHhhhcCCCCCeEEEeCCeEEeeehHHHHhcCHHHHHHhcccccCCCCCcEEecCCCHHHHHHHhhhhccCCC
Q 019649 172 SDMGQGLKDLLESEIGCDIVFEVGDETFKAHKLILAARSPVFRAQFYGLVGDRNLDKVVVKDVEPSIFKAMLLFIYTDKF 251 (337)
Q Consensus 172 ~~~~~~~~~~~~~~~~~Dv~~~v~~~~~~~hk~iLa~~S~~F~~~~~~~~~e~~~~~i~l~~~~~~~f~~~L~~iYt~~~ 251 (337)
..+.+++++++.++.++||+|.++|++|+|||.||+++||||++||.+++ ...|.++++++++|+.+|+|+||+.+
T Consensus 9 ~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~----~~~i~l~~~~~~~f~~ll~~iYtg~~ 84 (119)
T 3b84_A 9 VRVLQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQSLYGDGS----GGSVVLPAGFAEIFGLLLDFFYTGHL 84 (119)
T ss_dssp HHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTTT----CCCEEECGGGHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHhcCCCcceEEEECCEEEEeeHHHHhhcCHHHHHHHCCCC----CCeEEeCCCCHHHHHHHHHHHcCCCC
Confidence 45778899999999999999999999999999999999999999998765 56899999999999999999999999
Q ss_pred CCcccccCCCCccchHHHHHHHHHHhhccChhHHHHHHHHHHhcc
Q 019649 252 PDVYEITGTTSMCTTTNMVQHLLAAADLYNVDRLKLLCESKLCEE 296 (337)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~ce~~l~~~ 296 (337)
+... +++.+|+.+|++|+++.|++.|+++|.+.
T Consensus 85 ~~~~------------~~v~~ll~~A~~~~i~~L~~~C~~~l~~~ 117 (119)
T 3b84_A 85 ALTS------------GNRDQVLLAARELRVPEAVELCQSFKPKT 117 (119)
T ss_dssp CCCT------------TTHHHHHHHHHHTTCHHHHHHHHHCC---
T ss_pred ccCH------------HHHHHHHHHHHHhCcHHHHHHHHHHHHHc
Confidence 8775 68999999999999999999999998753
No 16
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.92 E-value=3.1e-25 Score=174.73 Aligned_cols=111 Identities=23% Similarity=0.313 Sum_probs=98.9
Q ss_pred CchhhhHHHhhhcCCCCCeEEEeCCeEEeeehHHHHhcCHHHHHHhcccccC--CCCCcEEecCCCHHHHHHHhhhhccC
Q 019649 172 SDMGQGLKDLLESEIGCDIVFEVGDETFKAHKLILAARSPVFRAQFYGLVGD--RNLDKVVVKDVEPSIFKAMLLFIYTD 249 (337)
Q Consensus 172 ~~~~~~~~~~~~~~~~~Dv~~~v~~~~~~~hk~iLa~~S~~F~~~~~~~~~e--~~~~~i~l~~~~~~~f~~~L~~iYt~ 249 (337)
..+.+++.+++.++.++||+|.++|++|+|||.||++||+||++||.+++.+ +....|.++++++++|+.+|+|+||+
T Consensus 32 ~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~~v~~~~f~~lL~fiYtg 111 (144)
T 2ppi_A 32 ARLLRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMREILDYIFSG 111 (144)
T ss_dssp HHHHHHHHHTTC--CCCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHCC-----CCCEEECCSSCHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEeCCCCHHHHHHHHHHHhCC
Confidence 4678899999999999999999999999999999999999999999988765 56778999999999999999999999
Q ss_pred CCCCcccccCCCCccchHHHHHHHHHHhhccChhHHHHHHHHHHh
Q 019649 250 KFPDVYEITGTTSMCTTTNMVQHLLAAADLYNVDRLKLLCESKLC 294 (337)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~ce~~l~ 294 (337)
.+++.. +++.+|+.+|++|+++.|++.|+++|.
T Consensus 112 ~~~i~~------------~~v~~ll~~A~~l~i~~L~~~C~~~L~ 144 (144)
T 2ppi_A 112 QIRLNE------------DTIQDVVQAADLLLLTDLKTLCCEFLE 144 (144)
T ss_dssp CCCCCT------------TTHHHHHHHHHHTTCHHHHHHHHTTC-
T ss_pred CCCCCH------------HHHHHHHHHHHHhCcHHHHHHHHHHhC
Confidence 998765 689999999999999999999998863
No 17
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.92 E-value=1.2e-24 Score=165.23 Aligned_cols=107 Identities=27% Similarity=0.381 Sum_probs=99.0
Q ss_pred CchhhhHHHhhhcCCCCCeEEEeCCeEEeeehHHHHhcCHHHHHHhcccccCCCCCcEEec--CCCHHHHHHHhhhhccC
Q 019649 172 SDMGQGLKDLLESEIGCDIVFEVGDETFKAHKLILAARSPVFRAQFYGLVGDRNLDKVVVK--DVEPSIFKAMLLFIYTD 249 (337)
Q Consensus 172 ~~~~~~~~~~~~~~~~~Dv~~~v~~~~~~~hk~iLa~~S~~F~~~~~~~~~e~~~~~i~l~--~~~~~~f~~~L~~iYt~ 249 (337)
..+.+++++++.++.++||+|.++|++|+|||.||+++||||++||.++ ....|.|+ ++++++|+.+|+|+||+
T Consensus 7 ~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~----~~~~i~l~~~~~~~~~f~~ll~~~Yt~ 82 (116)
T 2vpk_A 7 EHLLERLNKQREAGFLCDCTIVIGEFQFKAHRNVLASFSEYFGAIYRST----SENNVFLDQSQVKADGFQKLLEFIYTG 82 (116)
T ss_dssp HHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTC----CCSCEECCTTTCCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhcCCCCcEEEEECCEEEeccHHHHhhcCHHHHHHHcCC----CCCeEEeecCCCCHHHHHHHHHHHcCC
Confidence 4577889999999999999999999999999999999999999999876 35678888 99999999999999999
Q ss_pred CCCCcccccCCCCccchHHHHHHHHHHhhccChhHHHHHHHHHHh
Q 019649 250 KFPDVYEITGTTSMCTTTNMVQHLLAAADLYNVDRLKLLCESKLC 294 (337)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~ce~~l~ 294 (337)
.+++.. +++.+|+.+|++|+++.|++.|+++|.
T Consensus 83 ~~~~~~------------~~v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 83 TLNLDS------------WNVKEIHQAADYLKVEEVVTKCKIKME 115 (116)
T ss_dssp CCCCCT------------TTHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred CcccCH------------HHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 998765 689999999999999999999999985
No 18
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.91 E-value=4.9e-25 Score=171.75 Aligned_cols=114 Identities=26% Similarity=0.255 Sum_probs=98.0
Q ss_pred CchhhhHHHhhhcCCCCCeEEEeCCeEEeeehHHHHhcCHHHHHHhcccccCCCCCcEEecCCCHHHHHHHhhhhccCCC
Q 019649 172 SDMGQGLKDLLESEIGCDIVFEVGDETFKAHKLILAARSPVFRAQFYGLVGDRNLDKVVVKDVEPSIFKAMLLFIYTDKF 251 (337)
Q Consensus 172 ~~~~~~~~~~~~~~~~~Dv~~~v~~~~~~~hk~iLa~~S~~F~~~~~~~~~e~~~~~i~l~~~~~~~f~~~L~~iYt~~~ 251 (337)
..+.+.+++++.++.++||+|.++|++|+|||.||+++|+||++||.+++ ...|.++++++++|+.+|+|+||+.+
T Consensus 10 ~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~----~~~i~l~~~~~~~f~~lL~fiYtg~~ 85 (135)
T 2yy9_A 10 VRVLQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQRIYGDGT----GGSVVLPAGFAEIFGLLLDFFYTGHL 85 (135)
T ss_dssp HHHHHHHHHHHHTTTTCCEEEEETTEEEEECHHHHHHHCHHHHHTCC--------CCEEECGGGHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHhCHHHHHHHcCCC----CCeEEeCCCCHHHHHHHHHHHhCCCC
Confidence 46788999999999999999999999999999999999999999998765 56799999999999999999999999
Q ss_pred CCcccccCCCCccchHHHHHHHHHHhhccChhHHHHHHHHHHhccCChhh
Q 019649 252 PDVYEITGTTSMCTTTNMVQHLLAAADLYNVDRLKLLCESKLCEELNAET 301 (337)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~ce~~l~~~~~~~n 301 (337)
.+.. +++.+|+.+|++|+++.|++.|+++|.+.+...+
T Consensus 86 ~i~~------------~~v~~ll~~A~~l~i~~L~~~C~~~l~~~l~~~~ 123 (135)
T 2yy9_A 86 ALTS------------GNRDQVLLAAKELRVPEAVELCQSFQPQTSVGQA 123 (135)
T ss_dssp CCCT------------TTHHHHHHHHHHTTCHHHHHHHHHCCC-------
T ss_pred CCCH------------HHHHHHHHHHHHhCcHHHHHHHHHHHHHhccCCC
Confidence 8775 6899999999999999999999999988765443
No 19
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.91 E-value=1.4e-24 Score=165.99 Aligned_cols=109 Identities=23% Similarity=0.365 Sum_probs=100.9
Q ss_pred CCchhhhHHHhhhcCCCCCeEEEeCCeEEeeehHHHHhcCHHHHHHhcccccCCCCCcEEecCCCHHHHHHHhhhhccCC
Q 019649 171 PSDMGQGLKDLLESEIGCDIVFEVGDETFKAHKLILAARSPVFRAQFYGLVGDRNLDKVVVKDVEPSIFKAMLLFIYTDK 250 (337)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~Dv~~~v~~~~~~~hk~iLa~~S~~F~~~~~~~~~e~~~~~i~l~~~~~~~f~~~L~~iYt~~ 250 (337)
++.+.+.+++++.++.++||+|.++|++|+|||.||+++||||++||.++ ..+|.++++++++|+.+|+|+||+.
T Consensus 12 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~-----~~~i~l~~~~~~~f~~ll~~~Ytg~ 86 (121)
T 1buo_A 12 PTGLLCKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHRN-----SQHYTLDFLSPKTFQQILEYAYTAT 86 (121)
T ss_dssp HHHHHHHHHHHHHHTTTCCEEEEESSCEEEECHHHHHHHCHHHHHHTTSC-----CSEEEECSSCHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEECCEEEehhHHHHhhcCHHHHHHHcCC-----CcEEEeCCCCHHHHHHHHHhhcCCC
Confidence 45678899999999999999999999999999999999999999999763 5679999999999999999999999
Q ss_pred CCCcccccCCCCccchHHHHHHHHHHhhccChhHHHHHHHHHHhcc
Q 019649 251 FPDVYEITGTTSMCTTTNMVQHLLAAADLYNVDRLKLLCESKLCEE 296 (337)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~ce~~l~~~ 296 (337)
++... +++.+++.+|++|+++.|++.|+++|.+.
T Consensus 87 ~~~~~------------~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 120 (121)
T 1buo_A 87 LQAKA------------EDLDDLLYAAEILEIEYLEEQCLKMLETI 120 (121)
T ss_dssp CCCCG------------GGHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred cCCCH------------HHHHHHHHHHHHHCCHHHHHHHHHHHHHh
Confidence 98775 68999999999999999999999999764
No 20
>2gkw_A TNF receptor-associated factor 3; CD40, NF-KB signaling, BAFF receptor, TRAF3, apoptosis; 2.70A {Homo sapiens} PDB: 1kzz_A 1l0a_A 1zms_A 1rf3_A
Probab=99.91 E-value=3.9e-25 Score=182.32 Aligned_cols=136 Identities=26% Similarity=0.378 Sum_probs=107.2
Q ss_pred eeeEEEEEEccccccc-CCCCCC--eeeeccceec--CeeEEEEEEcCCCCCCCCCceEEEEEEecC------CCceEEE
Q 019649 17 VNGSHQFTVKGYSLAK-GMGPGK--CLSSDVFTVG--GYDWAIYFYPDGKNPEDGALYVSVFIALAS------EGTDVRA 85 (337)
Q Consensus 17 ~~~~~~w~I~~fs~~~-~~~~~~--~~~S~~f~~~--g~~W~l~~~p~g~~~~~~~~~lsl~l~~~~------~~~~~~~ 85 (337)
..++|+|+|+||+.++ +++.|+ .++||+|.+| ||+|+|++||+|++.+.++ |||+||++.. ..|++.+
T Consensus 38 ~~g~~~w~I~~fS~~~~~~~~g~~~~i~S~~F~vg~~Gykw~i~~yPnG~~~~~~~-~lSlyL~l~~~~~d~~l~wp~~a 116 (192)
T 2gkw_A 38 YNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGT-HLSLFFVIMRGEYDALLPWPFKQ 116 (192)
T ss_dssp CSSEEEEEEECHHHHHHHHHHTSCSCEECCCEESSTTSCEEEEEEETTCCGGGTTT-EEEEEEEEECCTTGGGSCSSCCC
T ss_pred cCcEEEEEECCHHHHHHHhhcCCCceEEcccEEECCCCcEEEEEEEeCCCCCCCCC-EEEEEEEEecCCCCccCCCcEEE
Confidence 5789999999999886 456666 6999999999 9999999999998766666 9999999862 2599999
Q ss_pred EEEEEEeecCCCCccceecccccccccCccccc----ccCcccCccceeeccccccCCCcCCCeEEEEEecceec
Q 019649 86 LFELTLVDQSGKGKHKVHSHFDRALESGPYTLK----YRGSMWGYKRFFKRTSLETSDYIKDDCLLINCTVGVVR 156 (337)
Q Consensus 86 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~G~~~fi~~~~L~~~~~l~dd~l~i~~~v~i~~ 156 (337)
+++|+|+||.++..+..... .. ......|. ..+.+|||++|+++++|+++|||.||+++|+|+|.+..
T Consensus 117 ~~~l~lldq~~~~~~~~~~~-~~--~~~~~~F~~~~~~~~~~wG~~~Fi~~~~L~~~gyl~dD~l~I~~~V~v~~ 188 (192)
T 2gkw_A 117 KVTLMLMDQGSSRRHLGDAF-KP--DPNSSSFKKPTGEMNIASGCPVFVAQTVLENGTYIKDDTIFIKVIVDTSD 188 (192)
T ss_dssp CEEEEECCCSTTCCCEEEEE-CC--CTTCTTSSCCSSSBCCCEEEEEEEEHHHHHHTTSCBTTEEEEEEEECCTT
T ss_pred EEEEEEECCCCCccceEEEE-ec--CCCcccccCCCCCCcCCCChHHEeEHHHhCcCCCeeCCEEEEEEEEEcCC
Confidence 99999999998654322111 00 00112332 12468999999999999988999999999999997764
No 21
>1ca9_A TRAF2, protein (TNF receptor associated factor 2); TNF signaling, TRAF, adapter protein, cell surviVal; 2.30A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1qsc_A 1czz_A
Probab=99.91 E-value=8.1e-25 Score=180.83 Aligned_cols=136 Identities=18% Similarity=0.339 Sum_probs=106.3
Q ss_pred ceeeEEEEEEcccccccC-CCCCC--eeeecccee--cCeeEEEEEEcCCCCCCCCCceEEEEEEecC------CCceEE
Q 019649 16 TVNGSHQFTVKGYSLAKG-MGPGK--CLSSDVFTV--GGYDWAIYFYPDGKNPEDGALYVSVFIALAS------EGTDVR 84 (337)
Q Consensus 16 ~~~~~~~w~I~~fs~~~~-~~~~~--~~~S~~f~~--~g~~W~l~~~p~g~~~~~~~~~lsl~l~~~~------~~~~~~ 84 (337)
...++|+|+|+||+.+++ .+.|+ .++||+|.+ ||++|+|.+||+|++.+.++ |||+||.+.. ..|++.
T Consensus 40 ~~~g~~~w~I~nfS~~~~~~~~g~~~~i~S~~F~v~~gG~~W~i~~yP~G~~~~~~~-~lSlyL~l~~~~~~~~~~W~~~ 118 (192)
T 1ca9_A 40 TYDGVFIWKISDFARKRQEAVAGRIPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGT-HLSLFFVVMKGPNDALLRWPFN 118 (192)
T ss_dssp CSSSEEEEEEESHHHHHHHHHTTSSCCEECCCEESSTTSCEEEEEEETTCCGGGTTT-EEEEEEEEECCTTGGGSCSSCC
T ss_pred ccCceEEEEECCHHHHHHHhhcCCCceEECceEEeCCCCeEEEEEEEeCCCCCCCCC-EEEEEEEEccCCCCCcCCCceE
Confidence 367899999999998865 45666 699999999 99999999999998765556 9999999862 469999
Q ss_pred EEEEEEEeecCCCCccceecccccccccCccccc----ccCcccCccceeeccccc-cCCCcCCCeEEEEEecceec
Q 019649 85 ALFELTLVDQSGKGKHKVHSHFDRALESGPYTLK----YRGSMWGYKRFFKRTSLE-TSDYIKDDCLLINCTVGVVR 156 (337)
Q Consensus 85 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~G~~~fi~~~~L~-~~~~l~dd~l~i~~~v~i~~ 156 (337)
++|+|+|+|+++..... .. .... .....|. ..+.+|||++|+++++|+ .++||.||+++|+|+|.|..
T Consensus 119 a~~~l~lldq~~~~~~~-~~-~~~~--~~~~~f~rp~~~~~~~wG~~~Fi~~~~L~~~~gyl~dD~l~I~~~V~V~~ 191 (192)
T 1ca9_A 119 QKVTLMLLDQNNREHVI-DA-FRPD--VTSSSFQRPVNDMNIASGCPLFCPVSKMEAKNSYVRDDAIFIKAIVDLTG 191 (192)
T ss_dssp CCEEEEECCTTSSCCEE-EE-ECCC--TTSGGGSCCSSSBCCCEEEEEEEETHHHHSSCSSCBTTEEEEEEEECCTT
T ss_pred EEEEEEEECCCCCceee-Ee-eccC--CchhhhcCCccCCCCCcChhheeEHHHhhhccCCEeCCEEEEEEEEEecC
Confidence 99999999998763211 11 0000 0011221 235689999999999998 78999999999999998864
No 22
>1d00_A Tumor necrosis factor receptor associated protein 2; B-sandwich, protein-peptide complex, apoptosis; 2.00A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1ca4_A 1d0j_A 1f3v_B 1czy_A 1d01_A 1d0a_A
Probab=99.91 E-value=1.9e-24 Score=175.03 Aligned_cols=136 Identities=18% Similarity=0.333 Sum_probs=104.9
Q ss_pred ceeeEEEEEEcccccccCC-CCCC--eeeeccce--ecCeeEEEEEEcCCCCCCCCCceEEEEEEecC------CCceEE
Q 019649 16 TVNGSHQFTVKGYSLAKGM-GPGK--CLSSDVFT--VGGYDWAIYFYPDGKNPEDGALYVSVFIALAS------EGTDVR 84 (337)
Q Consensus 16 ~~~~~~~w~I~~fs~~~~~-~~~~--~~~S~~f~--~~g~~W~l~~~p~g~~~~~~~~~lsl~l~~~~------~~~~~~ 84 (337)
...++|+|+|+||+.+++. ..|+ .++||+|. +||++|+|.+||+|++.+.++ |||+||++.. ..|++.
T Consensus 16 ~~~g~~~w~I~nfS~~~~~~~~g~~~~i~S~~F~~~~gG~~W~i~~yP~G~~~~~~~-~lSlyL~l~~~~~~~~~~w~~~ 94 (168)
T 1d00_A 16 TYDGVFIWKISDFARKRQEAVAGRIPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGT-HLSLFFVVMKGPNDALLRWPFN 94 (168)
T ss_dssp CSSSEEEEEEESHHHHHHHHHTTSSCCEECCCEESSTTSCEEEEEEETTCCGGGTTT-EEEEEEEEECCTTGGGSCSSCC
T ss_pred ccCCEEEEEECCHHHHHHHhhcCCCeEEECCCeecCCCCEEEEEEEEeCCCCCCCCc-EEEEEEEEecCCCCccCCCceE
Confidence 3578999999999988753 4566 49999995 899999999999998765556 9999999863 379999
Q ss_pred EEEEEEEeecCCCCccceecccccccccCccccc----ccCcccCccceeeccccccC-CCcCCCeEEEEEecceec
Q 019649 85 ALFELTLVDQSGKGKHKVHSHFDRALESGPYTLK----YRGSMWGYKRFFKRTSLETS-DYIKDDCLLINCTVGVVR 156 (337)
Q Consensus 85 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~G~~~fi~~~~L~~~-~~l~dd~l~i~~~v~i~~ 156 (337)
++++++|+||++.... .... .. ......|. ..+.+|||++|+++++|++. +||.||+|+|+|+|.|..
T Consensus 95 ~~~~l~ll~q~~~~~~-~~~~-~~--~~~~~~f~~p~~~~~~~~G~~~Fi~~~~L~~~~gyl~dD~l~I~~~V~v~~ 167 (168)
T 1d00_A 95 QKVTLMLLDQNNREHV-IDAF-RP--DVTSSSFQRPVNDMNIASGCPLFCPVSKMEAKNSYVRDDAIFIKAIVDLTG 167 (168)
T ss_dssp CCEEEEECCTTSSCCE-EEEE-CC--CTTSGGGSCCSSSBCCCEEEEEEEETTTTTSSSSSSBTTEEEEEEEECCTT
T ss_pred EEEEEEEECCCCCccc-eecc-cc--CcchhhccCCCcCCCCCcCcceEeEHHHhcccCCceeCCEEEEEEEEEecC
Confidence 9999999999875321 1110 00 00012232 23578999999999999875 999999999999998753
No 23
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.90 E-value=4.7e-24 Score=162.60 Aligned_cols=107 Identities=26% Similarity=0.340 Sum_probs=98.4
Q ss_pred CCchhhhHHHhhhcCCCCCeEEEeCCeEEeeehHHHHhcCHHHHHHhcccccCCCCCcEEecCCCHHHHHHHhhhhccCC
Q 019649 171 PSDMGQGLKDLLESEIGCDIVFEVGDETFKAHKLILAARSPVFRAQFYGLVGDRNLDKVVVKDVEPSIFKAMLLFIYTDK 250 (337)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~Dv~~~v~~~~~~~hk~iLa~~S~~F~~~~~~~~~e~~~~~i~l~~~~~~~f~~~L~~iYt~~ 250 (337)
...+.+.+++++.++.++||+|.++|++|+|||.||+++|+||++||.+ +...|.++++++++|+.+|+|+||+.
T Consensus 11 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~-----~~~~i~l~~~~~~~f~~ll~~~Ytg~ 85 (119)
T 2q81_A 11 SQHVLEQLNQQRQLGLLCDCTFVVDGVHFKAHKAVLAACSEYFKMLFVD-----QKDVVHLDISNAAGLGQVLEFMYTAK 85 (119)
T ss_dssp HHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHH-----CCSGGGGGGCCHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHhcCCCcceEEEECCEEEehhHHHHHHcCHHHHHHHcC-----CCCEEEeCCCCHHHHHHHHHHHcCCC
Confidence 3467888999999999999999999999999999999999999999976 24578889999999999999999999
Q ss_pred CCCcccccCCCCccchHHHHHHHHHHhhccChhHHHHHHHHHHh
Q 019649 251 FPDVYEITGTTSMCTTTNMVQHLLAAADLYNVDRLKLLCESKLC 294 (337)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~ce~~l~ 294 (337)
+.... +++.+|+.+|++|+++.|++.|+++|.
T Consensus 86 ~~i~~------------~~~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 86 LSLSP------------ENVDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp CCCCT------------TTHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred CccCH------------HHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 98775 689999999999999999999999985
No 24
>1flk_A TNF receptor associated factor 3; TNF signaling, TRAF3, CD40-binding protein, apoptosis; 2.80A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1fll_A
Probab=99.90 E-value=2.8e-24 Score=181.79 Aligned_cols=137 Identities=25% Similarity=0.365 Sum_probs=107.3
Q ss_pred ceeeEEEEEEcccccccC-CCCC--Ceeeeccceec--CeeEEEEEEcCCCCCCCCCceEEEEEEecC------CCceEE
Q 019649 16 TVNGSHQFTVKGYSLAKG-MGPG--KCLSSDVFTVG--GYDWAIYFYPDGKNPEDGALYVSVFIALAS------EGTDVR 84 (337)
Q Consensus 16 ~~~~~~~w~I~~fs~~~~-~~~~--~~~~S~~f~~~--g~~W~l~~~p~g~~~~~~~~~lsl~l~~~~------~~~~~~ 84 (337)
+..++|+|+|+||+.+++ ++.| ..++||+|.+| ||.|+|.+||||++.+.++ |+|+||.+.. ..|++.
T Consensus 73 ~~~g~~~wkI~nfS~~~~~~~~g~~~~i~S~~F~vg~~Gy~w~i~~yPnG~~~~~~~-~lSlyL~l~~~~~d~~l~Wp~~ 151 (228)
T 1flk_A 73 SYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGT-HLSLFFVIMRGEYDALLPWPFK 151 (228)
T ss_dssp CSSSEEEEEEECHHHHHHHHHTTSCCCEECCCEESSTTSCEECEEEETTCCGGGTTT-EEEEEECCBCCTTTTSSCSSCC
T ss_pred CcCcEEEEEECCHHHHHHHhhcCCCeeEECceEEeCCCCcEEEEEEEcCCCCCCCCC-EEEEEEEEecCCccccCCCcEE
Confidence 367899999999998864 4555 48999999999 9999999999998766666 9999999862 269999
Q ss_pred EEEEEEEeecCCCCccceecccccccccCccccc----ccCcccCccceeeccccccCCCcCCCeEEEEEecceec
Q 019649 85 ALFELTLVDQSGKGKHKVHSHFDRALESGPYTLK----YRGSMWGYKRFFKRTSLETSDYIKDDCLLINCTVGVVR 156 (337)
Q Consensus 85 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~G~~~fi~~~~L~~~~~l~dd~l~i~~~v~i~~ 156 (337)
++++|+|+||.++........ .. ......|. ..+.+|||+.|+++++|+++|||.||+++|+|+|.+..
T Consensus 152 a~~~l~lldq~~~~~~~~~~~-~~--~~~~~~F~rp~~~~~~~wG~~~Fi~~~~L~~~gyL~dD~l~I~~~V~v~~ 224 (228)
T 1flk_A 152 QKVTLMLMDQGSSRRHLGDAF-KP--DPNSSSFKKPTGEMNIASGCPVFVAQTVLENGTYIKDDTIFIKVIVDTSD 224 (228)
T ss_dssp CCEEEEECCCSSSCCCEEEEE-CC--CTTCTTSSSCSSSBCCCCSEEEEEEHHHHSSSTTCCSSEEEEEEECCCTT
T ss_pred EEEEEEEEcCCCCccceeeee-cC--CCccccccCCccCCCCCcCHHHeeEHHHHccCCCccCCEEEEEEEEEccc
Confidence 999999999997654221110 00 00011222 23568999999999999989999999999999998865
No 25
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.90 E-value=3.8e-25 Score=169.93 Aligned_cols=112 Identities=22% Similarity=0.366 Sum_probs=99.4
Q ss_pred CCCCchhhhHHHhhhcCCCCCeEEEeCCeEEeeehHHHHhcCHHHHHHhcccccCCCCCcEEe-cCCCHHHHHHHhhhhc
Q 019649 169 VPPSDMGQGLKDLLESEIGCDIVFEVGDETFKAHKLILAARSPVFRAQFYGLVGDRNLDKVVV-KDVEPSIFKAMLLFIY 247 (337)
Q Consensus 169 ~p~~~~~~~~~~~~~~~~~~Dv~~~v~~~~~~~hk~iLa~~S~~F~~~~~~~~~e~~~~~i~l-~~~~~~~f~~~L~~iY 247 (337)
.++..+.+++++++.++.++||+|.++|++|+|||.||+++||||++||.+++.+. ..|.+ +++++++|+.+|+|+|
T Consensus 11 ~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~mf~~~~~e~--~~i~l~~~v~~~~f~~lL~~iY 88 (124)
T 2ihc_A 11 VHSTNVLLSLNDQRKKDVLCDVTIFVEGQRFRAHRSVLAACSSYFHSRIVGQADGE--LNITLPEEVTVKGFEPLIQFAY 88 (124)
T ss_dssp SHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTC---C--EEEECCTTSCHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHhcCCCcCEEEEECCEEEecHHHHHHHcCHHHHHHHcCCCCCC--ceEeecCCcCHHHHHHHHHHhc
Confidence 34557889999999999999999999999999999999999999999999887664 57888 5899999999999999
Q ss_pred cCCCCCcccccCCCCccchHHHHHHHHHHhhccChhHHHHHHHHHHh
Q 019649 248 TDKFPDVYEITGTTSMCTTTNMVQHLLAAADLYNVDRLKLLCESKLC 294 (337)
Q Consensus 248 t~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~ce~~l~ 294 (337)
|+.+++.. +++.+|+.+|++|+++.|+..|+++|.
T Consensus 89 tg~~~i~~------------~~v~~ll~~A~~~~~~~L~~~C~~~l~ 123 (124)
T 2ihc_A 89 TAKLILSK------------ENVDEVCKCVEFLSVHNIEESCFQFLK 123 (124)
T ss_dssp HSEEEEET------------TTHHHHHHHHHHHTBSSCCGGGGGTC-
T ss_pred CCCcccCH------------HHHHHHHHHHHHHCCHHHHHHHHHHHh
Confidence 99987765 689999999999999999999998874
No 26
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.90 E-value=2.3e-24 Score=166.75 Aligned_cols=110 Identities=23% Similarity=0.310 Sum_probs=94.5
Q ss_pred CCchhhhHHHhhhcCCCCCeEEEeCCeEEeeehHHHHhcCHHHHHHhcccccCCCCCcEEec-CCCHHHHHHHhhhhccC
Q 019649 171 PSDMGQGLKDLLESEIGCDIVFEVGDETFKAHKLILAARSPVFRAQFYGLVGDRNLDKVVVK-DVEPSIFKAMLLFIYTD 249 (337)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~Dv~~~v~~~~~~~hk~iLa~~S~~F~~~~~~~~~e~~~~~i~l~-~~~~~~f~~~L~~iYt~ 249 (337)
...+.+.+++++.++.++||+|.++|++|+|||.||+++|+||++||.++ ....|.++ ++++++|+.+|+|+||+
T Consensus 17 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~vLaa~S~~F~~~f~~~----~~~~i~l~~~~~~~~f~~ll~~iYtg 92 (129)
T 3ga1_A 17 GNSILECLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFNNS----RSAVVELPAAVQPQSFQQILSFCYTG 92 (129)
T ss_dssp HHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHHHC----CCSEEECCTTCCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhcCCCcceEEEECCEEEEehHHHHHHcCHHHHHHHcCC----CCCEEEECCCCCHHHHHHHHHHHhCC
Confidence 34578889999999999999999999999999999999999999999875 56789996 99999999999999999
Q ss_pred CCCCcccccCCCCccchHHHHHHHHHHhhccChhHHHHHHHHHHhcc
Q 019649 250 KFPDVYEITGTTSMCTTTNMVQHLLAAADLYNVDRLKLLCESKLCEE 296 (337)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~ce~~l~~~ 296 (337)
.+.+.. +++.+|+.+|++|+++.|++.|+++|.+.
T Consensus 93 ~~~i~~------------~~~~~ll~~A~~~~i~~l~~~C~~~L~~~ 127 (129)
T 3ga1_A 93 RLSMNV------------GDQDLLMYTAGFLQIQEIMEKGTEFFLKV 127 (129)
T ss_dssp EEECCT------------TTHHHHHHHHHHTTBTTSSCC--------
T ss_pred ccccCH------------HHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 998776 68999999999999999999999999875
No 27
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.89 E-value=1e-24 Score=167.92 Aligned_cols=109 Identities=27% Similarity=0.379 Sum_probs=100.2
Q ss_pred CCchhhhHHHhhhcCCCCCeEEEeCCeEEeeehHHHHhcCHHHHHHhcccccCCCCCcEEecC-CCHHHHHHHhhhhccC
Q 019649 171 PSDMGQGLKDLLESEIGCDIVFEVGDETFKAHKLILAARSPVFRAQFYGLVGDRNLDKVVVKD-VEPSIFKAMLLFIYTD 249 (337)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~Dv~~~v~~~~~~~hk~iLa~~S~~F~~~~~~~~~e~~~~~i~l~~-~~~~~f~~~L~~iYt~ 249 (337)
...+.+.+++++.++.++||+|.++|++|+|||.||+++|+||++||.+++.+ ...|.+++ +++++|+.+|+|+||+
T Consensus 16 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e--~~~i~l~~~~~~~~f~~~l~~iYtg 93 (125)
T 3ohu_A 16 CTNILLGLNDQRKKDILCDVTLIVERKEFRAHRAVLAACSEYFWQALVGQTKN--DLVVSLPEEVTARGFGPLLQFAYTA 93 (125)
T ss_dssp HHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTCCCS--SCEEECCTTCCHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHhcCCccceEEEECCEEEechHHHHHHcCHHHHHHhcCCCCC--CcEEEeCCCCCHHHHHHHHHhHcCC
Confidence 34678889999999999999999999999999999999999999999988766 56899998 9999999999999999
Q ss_pred CCCCcccccCCCCccchHHHHHHHHHHhhccChhHHHHHHHHHH
Q 019649 250 KFPDVYEITGTTSMCTTTNMVQHLLAAADLYNVDRLKLLCESKL 293 (337)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~ce~~l 293 (337)
.+.+.. +++.+|+.+|++|+++.|++.|+++|
T Consensus 94 ~~~~~~------------~~v~~ll~~A~~l~i~~L~~~C~~~L 125 (125)
T 3ohu_A 94 KLLLSR------------ENIREVIRCAEFLRMHNLEDSCFSFL 125 (125)
T ss_dssp EEEECT------------TTHHHHHHHHHHHTBSSCTTSSCCCC
T ss_pred ceEECH------------HHHHHHHHHHHHhCCHHHHHHHHHhC
Confidence 988765 68999999999999999999998764
No 28
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.87 E-value=7.9e-22 Score=149.32 Aligned_cols=100 Identities=25% Similarity=0.376 Sum_probs=91.4
Q ss_pred CCchhhhHHHhhhcCCCCCeEEEeCCeEEeeehHHHHhcCHHHHHHhcccccCCCCCcEEecCCCHHHHHHHhhhhccCC
Q 019649 171 PSDMGQGLKDLLESEIGCDIVFEVGDETFKAHKLILAARSPVFRAQFYGLVGDRNLDKVVVKDVEPSIFKAMLLFIYTDK 250 (337)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~Dv~~~v~~~~~~~hk~iLa~~S~~F~~~~~~~~~e~~~~~i~l~~~~~~~f~~~L~~iYt~~ 250 (337)
...+.+.+++++.++.++||+|.++|+.|+|||.||+++|+||++||.++ ...|.++++++++|+.+|+|+||+.
T Consensus 15 ~~~l~~~l~~~~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~~F~~~f~~~-----~~~i~l~~~~~~~f~~~l~~~Ytg~ 89 (116)
T 3fkc_A 15 SGSLLNSLNEQRGHGLFCDVTVIVEDRKFRAHKNILSASSTYFHQLFSVA-----GQVVELSFIRAEIFAEILNYIYSSK 89 (116)
T ss_dssp HHHHHHHHHHHHHHTTTCCEEEEETTEEEEECHHHHHHHCHHHHHHTTSC-----CSEEEECSSCHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHhcCCceeEEEEECCEEEehhHHHHHHcCHHHHHHHcCC-----CCEEEeCCCCHHHHHHHHHhhcCCC
Confidence 45678889999999999999999999999999999999999999999764 5689999999999999999999999
Q ss_pred C-CCcccccCCCCccchHHHHHHHHHHhhccChhHHHH
Q 019649 251 F-PDVYEITGTTSMCTTTNMVQHLLAAADLYNVDRLKL 287 (337)
Q Consensus 251 ~-~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~ 287 (337)
+ .... +++.+++.+|++|+++.|++
T Consensus 90 ~~~~~~------------~~~~~ll~~A~~l~i~~L~~ 115 (116)
T 3fkc_A 90 IVRVRS------------DLLDELIKSGQLLGVKFIAA 115 (116)
T ss_dssp CCSCCH------------HHHHHHHHHHHHHTCHHHHT
T ss_pred cCCCCH------------HHHHHHHHHHHHhCccccCc
Confidence 9 4554 89999999999999999874
No 29
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.86 E-value=2.1e-22 Score=152.96 Aligned_cols=101 Identities=24% Similarity=0.290 Sum_probs=87.5
Q ss_pred CchhhhHHHhhhcCCCCCeEEEeCCeEEeeehHHHHhcCHHHHHHhcccccCCCCCcEEecCCCHHHHHHHhhhhccCCC
Q 019649 172 SDMGQGLKDLLESEIGCDIVFEVGDETFKAHKLILAARSPVFRAQFYGLVGDRNLDKVVVKDVEPSIFKAMLLFIYTDKF 251 (337)
Q Consensus 172 ~~~~~~~~~~~~~~~~~Dv~~~v~~~~~~~hk~iLa~~S~~F~~~~~~~~~e~~~~~i~l~~~~~~~f~~~L~~iYt~~~ 251 (337)
..+.+.+. ..++.++||+|.|+|++|+|||.|||++|+||++ ....|.++++++++|+.+|+|+||+.+
T Consensus 17 ~~~l~~l~--r~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~---------~~~~i~l~~v~~~~f~~ll~fiYtg~~ 85 (119)
T 3m5b_A 17 DRLVQLAA--RLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGR---------RGQWALGEGISPSTFAQLLNFVYGESV 85 (119)
T ss_dssp CHHHHHHH--HHTTTTCCEEEEETTEEEEECHHHHHTTCGGGCC---------CEEEECCSSCCHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHH--HhcCCCcceEEEECCEEEeeEHHHHHHcCHHHhc---------CCCEEEeCCCCHHHHHHHHHHHcCCCc
Confidence 34455554 3467899999999999999999999999999974 345799999999999999999999999
Q ss_pred CCcccccCCCCccchHHHHHHHHHHhhccChhHHHHHHHHHHhc
Q 019649 252 PDVYEITGTTSMCTTTNMVQHLLAAADLYNVDRLKLLCESKLCE 295 (337)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~ce~~l~~ 295 (337)
.+.. +++.+||.+|++|+++.|++.|++++..
T Consensus 86 ~i~~------------~~v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 86 ELQP------------GELRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp EECG------------GGHHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred CcCH------------HHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 8765 7899999999999999999999998764
No 30
>2f1z_A Ubiquitin carboxyl-terminal hydrolase 7; hausp, USP7, UBP, deubiquitinating enzyme, substrate recognition; 3.20A {Homo sapiens}
Probab=99.82 E-value=2.5e-20 Score=177.28 Aligned_cols=127 Identities=18% Similarity=0.239 Sum_probs=100.3
Q ss_pred ceeeEEEEEEcccccccCCCCCCeeeeccceecCeeEEEEEEcCCCCCC-CCCceEEEEEEec----CCCceEEEEEEEE
Q 019649 16 TVNGSHQFTVKGYSLAKGMGPGKCLSSDVFTVGGYDWAIYFYPDGKNPE-DGALYVSVFIALA----SEGTDVRALFELT 90 (337)
Q Consensus 16 ~~~~~~~w~I~~fs~~~~~~~~~~~~S~~f~~~g~~W~l~~~p~g~~~~-~~~~~lsl~l~~~----~~~~~~~~~~~~~ 90 (337)
...++|.|+|+||+.+++ .++|++|.+||++|+|.+||+|+..+ .++ |||+||.|. +.+|.+.|+|+++
T Consensus 28 ~~~~~~~w~I~nfS~~~~-----~~~S~~F~vgg~~W~i~~yP~G~~~~~~~~-~lSlyL~~~~~~~~~~w~v~a~f~l~ 101 (522)
T 2f1z_A 28 RSEATFQFTVERFSRLSE-----SVLSPPCFVRNLPWKIMVMPRFYPDRPHQK-SVGFFLQCNAESDSTSWSCHAQAVLK 101 (522)
T ss_dssp CSEEEEEEEESSCTTCCS-----CEECCCEEETTEEEEEEECBC--------C-BBCEEEEESTTCCCSSCBEEEEEEEE
T ss_pred cCCcEEEEEECChhhcCC-----ceeCCCEEECCEeeEEEEEeCCCCCCCCCC-eEEEEEEecCCCCCCCceEEEEEEEE
Confidence 347899999999999864 88999999999999999999997544 344 999999996 3479999999999
Q ss_pred EeecCCCCccceecccccccccCcccccccCcccCccceeecccc--ccCCCcCCCeEEEEEecceec
Q 019649 91 LVDQSGKGKHKVHSHFDRALESGPYTLKYRGSMWGYKRFFKRTSL--ETSDYIKDDCLLINCTVGVVR 156 (337)
Q Consensus 91 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~fi~~~~L--~~~~~l~dd~l~i~~~v~i~~ 156 (337)
|+|+.+....... ...++|.....+|||.+|++|++| .++|||.||+++|+|.|.+..
T Consensus 102 l~n~~~~~~~~~~--------~~~~~F~~~~~~wG~~~Fi~~~~L~~~~~g~L~nD~l~i~~~V~v~~ 161 (522)
T 2f1z_A 102 IINYRDDEKSFSR--------RISHLFFHKENDWGFSNFMAWSEVTDPEKGFIDDDKVTFEVFVQADA 161 (522)
T ss_dssp ECCTTCGGGCEEE--------ECCEEECGGGCEEEESSSSBHHHHSCGGGSSCBTTBEEEEEEEEECC
T ss_pred EEcCCCCccceec--------cceeEecCCCCCcchhheeEhhHhcCcccCcccCCcEEEEEEeeccc
Confidence 9998764332111 123556555778999999999999 468999999999999999864
No 31
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.50 E-value=7.8e-14 Score=110.95 Aligned_cols=127 Identities=15% Similarity=0.167 Sum_probs=92.7
Q ss_pred eEEEe-CCeEEeeehHHHHhcCHHHHHHhcc-ccc-CCCCCcEEecCCCHHHHHHHhhhhccCCCCCccccc------CC
Q 019649 190 IVFEV-GDETFKAHKLILAARSPVFRAQFYG-LVG-DRNLDKVVVKDVEPSIFKAMLLFIYTDKFPDVYEIT------GT 260 (337)
Q Consensus 190 v~~~v-~~~~~~~hk~iLa~~S~~F~~~~~~-~~~-e~~~~~i~l~~~~~~~f~~~L~~iYt~~~~~~~~~~------~~ 260 (337)
|+|+. +|+.|.|||.+ |+.|++|++||.+ ++. |+....|+|+++++.+++.+++|+|+..-....... ..
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~m~~~~~~~~e~~~~~Ipl~~V~~~iL~kViey~~~h~~~~~~~~~~~~~~~~~ 81 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT 81 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHHHTTSSCSS------CEECTTSCHHHHHHHHHHHHHTTTCCC-----------C
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHHHHHhcCCcccccCCCcCCCCccHHHHHHHHHHHHHcCcCCCCcccccccccch
Confidence 67765 78999999999 8999999999987 666 666778999999999999999999987732211000 00
Q ss_pred --------CCccchHHHHHHHHHHhhccChhHHHHHHHHHHhccC---ChhhHHHHHHHHHhCCChHH
Q 019649 261 --------TSMCTTTNMVQHLLAAADLYNVDRLKLLCESKLCEEL---NAETVATTLALAEQHQCPQL 317 (337)
Q Consensus 261 --------~~~~~~~~~~~~ll~~A~~~~~~~l~~~ce~~l~~~~---~~~n~~~~l~~A~~~~~~~L 317 (337)
........++.+|+.+|++++++.|.+.|++++...+ +++.+..++.+...+..+..
T Consensus 82 ~~i~~wD~~F~~id~~~l~eLl~AAnyL~I~~Lld~~c~~va~~i~gkt~eeir~~f~I~~d~t~eEe 149 (159)
T 2ast_A 82 DDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEE 149 (159)
T ss_dssp CCCCHHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSSCCHHHHHHHTTCCCCSCTTHH
T ss_pred hhhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCHHHH
Confidence 0023456899999999999999999999999997655 45555666666555555544
No 32
>4gwm_A Meprin A subunit beta; mulidomain structure, hydrolase; HET: NAG BMA FUC MAN; 1.85A {Homo sapiens} PDB: 4gwn_A*
Probab=99.40 E-value=1.2e-12 Score=123.59 Aligned_cols=137 Identities=23% Similarity=0.378 Sum_probs=106.3
Q ss_pred eecceeeEEEEEEcccccccCCCCCCeeeeccce-ecCeeEEEEEEcCCCCCCCCCceEEEEEEecCC------CceE-E
Q 019649 13 INETVNGSHQFTVKGYSLAKGMGPGKCLSSDVFT-VGGYDWAIYFYPDGKNPEDGALYVSVFIALASE------GTDV-R 84 (337)
Q Consensus 13 ~~~~~~~~~~w~I~~fs~~~~~~~~~~~~S~~f~-~~g~~W~l~~~p~g~~~~~~~~~lsl~l~~~~~------~~~~-~ 84 (337)
.++..|..++|+|.||+.+.+- .+..++||+|+ ..||.++|.+++++. . ++|+|+++.++ .||+ .
T Consensus 400 ~t~G~CP~~vw~i~nfs~~l~~-~~~~~~Sp~Fys~~GY~~~v~l~~~~~-----~-~~~~~~~l~sG~~D~~L~WP~~~ 472 (592)
T 4gwm_A 400 LSETRCPHHIWHIRNFTQFIGS-PNGTLYSPPFYSSKGYAFQIYLNLAHV-----T-NAGIYFHLISGANDDQLQWPCPW 472 (592)
T ss_dssp EESSCCCSEEEEECSCGGGTTC-TTCEEECCCEECTTSCEEEEEEECCSS-----S-EEEEEEEEECCTTGGGSCSSCCS
T ss_pred EeeCCCCCCceeecCHHHhhcC-CCCceeCCCccCCCCeEEEEEEecCCC-----c-eEEEEEEEecCCCCCCccCCCCC
Confidence 4567789999999999987653 46689999996 569999999998763 3 99999999854 6998 5
Q ss_pred EEEEEEEeecCCCCccceecccccccccCcc--------cc-----------------cccCcccCccceeeccccccCC
Q 019649 85 ALFELTLVDQSGKGKHKVHSHFDRALESGPY--------TL-----------------KYRGSMWGYKRFFKRTSLETSD 139 (337)
Q Consensus 85 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--------~~-----------------~~~~~~~G~~~fi~~~~L~~~~ 139 (337)
-+++|.|+||+.+...+++.. +++++.+. .+ ..++.+|||+.|++++.|...+
T Consensus 473 ~q~t~~llDQ~pd~~~rms~~--~s~ttdp~~~~~~~~~~w~~P~~~g~~~~~~~~~~~~r~~~~G~~~fish~~l~~r~ 550 (592)
T 4gwm_A 473 QQATMTLLDQNPDIRQRMSNQ--RSITTDPFMTTDNGNYFWDRPSKVGTVALFSNGTQFRRGGGYGTSAFITHERLKSRD 550 (592)
T ss_dssp EEEEEEECCCCSSGGGCCCEE--EEEECCTTCBCTTSCBTTSCHHHHCEEEECTTCCEEEEEEEEEEEEEEEHHHHTSTT
T ss_pred CEEEEEEeCCCCChHhcCcee--EEEEcCCcccCcccccccCCcccccccccccCCcceeecCCcCccccccHHHHhhcC
Confidence 789999999988777665443 22222111 11 1234578999999999999889
Q ss_pred CcCCCeEEEEEecceeccc
Q 019649 140 YIKDDCLLINCTVGVVRNR 158 (337)
Q Consensus 140 ~l~dd~l~i~~~v~i~~~~ 158 (337)
||+||.+.|.++|+-+...
T Consensus 551 fiK~d~~~i~~~~eD~~~l 569 (592)
T 4gwm_A 551 FIKGDDVYILLTVEDISHL 569 (592)
T ss_dssp SSBTTBEEEEEEEEECGGG
T ss_pred cccCCeEEEEEEEEeCccc
Confidence 9999999999999766533
No 33
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.24 E-value=2.2e-11 Score=88.26 Aligned_cols=82 Identities=15% Similarity=0.273 Sum_probs=61.7
Q ss_pred eEEEe-CCeEEeeehHHHHhcCHHHHHHhcc--cccCCCCCcEEecCCCHHHHHHHhhhhc-----c---CCCCCccccc
Q 019649 190 IVFEV-GDETFKAHKLILAARSPVFRAQFYG--LVGDRNLDKVVVKDVEPSIFKAMLLFIY-----T---DKFPDVYEIT 258 (337)
Q Consensus 190 v~~~v-~~~~~~~hk~iLa~~S~~F~~~~~~--~~~e~~~~~i~l~~~~~~~f~~~L~~iY-----t---~~~~~~~~~~ 258 (337)
|+|+. +|++|.|||.+ |+.|++|++||.+ .+.|+....|+|+++++.+++.+++|+| + +.++ ..
T Consensus 4 v~L~SsDg~~F~v~r~v-A~~S~~ik~m~~~~~~~~E~~~~~I~l~~V~~~iL~kViey~~~h~~~~~~~~~i~--~~-- 78 (97)
T 4ajy_C 4 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIP--EF-- 78 (97)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHHHCCC--------CEEECTTSCHHHHHHHHHHHHHHHHHTTCCSCCC--CC--
T ss_pred EEEEecCCcEEEecHHH-HHHhHHHHHHHHhCCCccccCCCceECCCCCHHHHHHHHHHHHHhcccCCCcCCCC--cC--
Confidence 45554 68899999999 9999999999976 6677778899999999999999999999 5 3333 00
Q ss_pred CCCCccchHHHHHHHHHHhhccC
Q 019649 259 GTTSMCTTTNMVQHLLAAADLYN 281 (337)
Q Consensus 259 ~~~~~~~~~~~~~~ll~~A~~~~ 281 (337)
+...+++.+|+.+|++++
T Consensus 79 -----~i~~~~l~eLl~AAnyL~ 96 (97)
T 4ajy_C 79 -----PIAPEIALELLMAANFLD 96 (97)
T ss_dssp -----CCCGGGHHHHHHHHHHHT
T ss_pred -----cCCHHHHHHHHHHHhhhC
Confidence 122478999999999986
No 34
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=99.17 E-value=8.7e-11 Score=91.15 Aligned_cols=110 Identities=17% Similarity=0.189 Sum_probs=84.5
Q ss_pred eEEEe-CCeEEeeehHHHHhcCHHHHHHhcccccCCCCCcEEecCCCHHHHHHHhhhhccCCCCCccccc------CC--
Q 019649 190 IVFEV-GDETFKAHKLILAARSPVFRAQFYGLVGDRNLDKVVVKDVEPSIFKAMLLFIYTDKFPDVYEIT------GT-- 260 (337)
Q Consensus 190 v~~~v-~~~~~~~hk~iLa~~S~~F~~~~~~~~~e~~~~~i~l~~~~~~~f~~~L~~iYt~~~~~~~~~~------~~-- 260 (337)
|+|.. +|+.|.+|+.+ |..|++|+.||.+.. ...|+|++++..+++.+++|+|...-....... ..
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~----~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~ 78 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLG----MDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDD 78 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHHHHHHTC----CSSEECTTCCHHHHHHHHHHHHHHTTCC---------------
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcC----CCceecCCcCHHHHHHHHHHHHHhccCCCccccccccccchhh
Confidence 66776 77999999998 899999999997531 457999999999999999999976532110000 00
Q ss_pred ------CCccchHHHHHHHHHHhhccChhHHHHHHHHHHhccCChhhHHH
Q 019649 261 ------TSMCTTTNMVQHLLAAADLYNVDRLKLLCESKLCEELNAETVAT 304 (337)
Q Consensus 261 ------~~~~~~~~~~~~ll~~A~~~~~~~l~~~ce~~l~~~~~~~n~~~ 304 (337)
+......+++.+|+.+|++++++.|.+.|++++...+..+++-+
T Consensus 79 i~~wD~~F~~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~ee 128 (141)
T 1fs1_B 79 IPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEE 128 (141)
T ss_dssp --HHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCHHH
T ss_pred hhHHHHHHHhCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHH
Confidence 00234568999999999999999999999999988876666544
No 35
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=99.00 E-value=1.1e-10 Score=92.68 Aligned_cols=120 Identities=16% Similarity=0.205 Sum_probs=61.4
Q ss_pred eEEEe-CCeEEeeehHHHHhcCHHHHHHhcccccCCCCCcEEecCCCHHHHHHHhhhhccCCCCCcc-------------
Q 019649 190 IVFEV-GDETFKAHKLILAARSPVFRAQFYGLVGDRNLDKVVVKDVEPSIFKAMLLFIYTDKFPDVY------------- 255 (337)
Q Consensus 190 v~~~v-~~~~~~~hk~iLa~~S~~F~~~~~~~~~e~~~~~i~l~~~~~~~f~~~L~~iYt~~~~~~~------------- 255 (337)
|+|.. +|+.|.+|+.+ |..|++|+.||.+.. ....|+|++++..+++.+++|+|........
T Consensus 6 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~---~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~ 81 (160)
T 2p1m_A 6 IVLKSSDGESFEVEEAV-ALESQTIAHMVEDDC---VDNGVPLPNVTSKILAKVIEYCKRHVEAAASKAEAVEGAATSDD 81 (160)
T ss_dssp --CCC---------CHH-HHTCTTTC---------------CCTTSCHHHHHHHHHC-----------------------
T ss_pred EEEEcCCCCEEEECHHH-HHHhHHHHHHHHccC---CCCceeCCcCcHHHHHHHHHHHHHcccCCCcccccccccccccc
Confidence 56664 78999999998 899999999997642 2347999999999999999999987632100
Q ss_pred ccc--CCCCccchHHHHHHHHHHhhccChhHHHHHHHHHHhccC---ChhhHHHHHHHHHhCC
Q 019649 256 EIT--GTTSMCTTTNMVQHLLAAADLYNVDRLKLLCESKLCEEL---NAETVATTLALAEQHQ 313 (337)
Q Consensus 256 ~~~--~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~ce~~l~~~~---~~~n~~~~l~~A~~~~ 313 (337)
... ..+.......++.+|+.+|++++++.|.+.|++++...+ +++.+..++.++..+.
T Consensus 82 ~i~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~eeir~~f~I~nd~t 144 (160)
T 2p1m_A 82 DLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFT 144 (160)
T ss_dssp -------------------CHHHHHHTTCHHHHHHHHHHHHHTTTTCCHHHHHHHTTCCCCCC
T ss_pred hhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCC
Confidence 000 000123456899999999999999999999999999988 5555666655555443
No 36
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=98.59 E-value=2.5e-07 Score=67.91 Aligned_cols=96 Identities=18% Similarity=0.243 Sum_probs=76.0
Q ss_pred CCeEEEeCCeEEeeehHHHHhcC-HHHHHHhccccc----CCCCCcEEecCCCHHHHHHHhhhhccCCCCCcccccCCCC
Q 019649 188 CDIVFEVGDETFKAHKLILAARS-PVFRAQFYGLVG----DRNLDKVVVKDVEPSIFKAMLLFIYTDKFPDVYEITGTTS 262 (337)
Q Consensus 188 ~Dv~~~v~~~~~~~hk~iLa~~S-~~F~~~~~~~~~----e~~~~~i~l~~~~~~~f~~~L~~iYt~~~~~~~~~~~~~~ 262 (337)
.-|+|.|||+.|...+..|+... .+|.+||.+... .....++-+ |-+|..|+.+|+|+.++.+....+
T Consensus 6 ~~v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fi-DRdp~~F~~IL~~lr~g~l~~p~~------ 78 (107)
T 3drz_A 6 KWVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRDPTYFGPVLNYLRHGKLVINKD------ 78 (107)
T ss_dssp CEEEEEETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEE-CSCHHHHHHHHHHHHHSCCCCCTT------
T ss_pred CEEEEEECCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEe-cCChHHHHHHHHHhCCCeeCCCCC------
Confidence 35789999999999999999775 488999875421 113344544 789999999999999999876542
Q ss_pred ccchHHHHHHHHHHhhccChhHHHHHHHHHHhc
Q 019649 263 MCTTTNMVQHLLAAADLYNVDRLKLLCESKLCE 295 (337)
Q Consensus 263 ~~~~~~~~~~ll~~A~~~~~~~l~~~ce~~l~~ 295 (337)
-....+++-|+.|+++.|++.|++.|.+
T Consensus 79 -----~~~~~l~~Ea~fy~l~~L~~~l~~~i~~ 106 (107)
T 3drz_A 79 -----LAEEGVLEEAEFYNITSLIKLVKDKIRE 106 (107)
T ss_dssp -----SCHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred -----CCHHHHHHHHHHCCCHHHHHHHHHHHhc
Confidence 1246789999999999999999998764
No 37
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=98.56 E-value=2.3e-07 Score=67.02 Aligned_cols=89 Identities=19% Similarity=0.239 Sum_probs=67.7
Q ss_pred CeEEEe-CCeEEeeehHHHHhcCHHHHHHhcccccCCCCCcEEecCCCHHHHHHHhhhhccCCCCCc-----ccccCCCC
Q 019649 189 DIVFEV-GDETFKAHKLILAARSPVFRAQFYGLVGDRNLDKVVVKDVEPSIFKAMLLFIYTDKFPDV-----YEITGTTS 262 (337)
Q Consensus 189 Dv~~~v-~~~~~~~hk~iLa~~S~~F~~~~~~~~~e~~~~~i~l~~~~~~~f~~~L~~iYt~~~~~~-----~~~~~~~~ 262 (337)
-|+|+. +|+.|.+++.+ |..|+.++.||.+++ +.....|+|++++..+++.+++|+|...-... .+.. .+
T Consensus 5 ~v~L~SsDg~~f~V~~~v-A~~S~~ik~ml~~~~-e~~~~~Iplp~V~~~iL~kVieyc~~h~~~~~~~~~~~~i~--~w 80 (99)
T 1hv2_A 5 FVTLVSKDDKEYEISRSA-AMISPTLKAMIEGPF-RESKGRIELKQFDSHILEKAVEYLNYNLKYSGVSEDDDEIP--EF 80 (99)
T ss_dssp EEEEEETTTEEEEEEHHH-HTTCHHHHHHHHSST-TTCTTEEEETTSCHHHHHHHHHHHHHHHHHHHHCSSCSSCC--CC
T ss_pred EEEEEecCCCEEEECHHH-HHHhHHHHHHHhccc-ccCCCceecCCcCHHHHHHHHHHHHHhcccCCCccccccCC--Cc
Confidence 366666 88999999996 899999999998765 55557899999999999999999996431100 0000 01
Q ss_pred ccchHHHHHHHHHHhhccCh
Q 019649 263 MCTTTNMVQHLLAAADLYNV 282 (337)
Q Consensus 263 ~~~~~~~~~~ll~~A~~~~~ 282 (337)
+...+.+.+|+.||+++++
T Consensus 81 -~vd~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 81 -EIPTEMSLELLLAADYLSI 99 (99)
T ss_dssp -CCCHHHHHHHHHHHHHHCC
T ss_pred -cCCHHHHHHHHHHHHHhCc
Confidence 3456899999999999874
No 38
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=98.56 E-value=4e-07 Score=72.52 Aligned_cols=122 Identities=16% Similarity=0.231 Sum_probs=83.6
Q ss_pred CeEEEe-CCeEEeeehHHHHhcCHHHHHHhccccc----CCCCCcEEecCCCHHHHHHHhhhhccCCCCCccc---c--c
Q 019649 189 DIVFEV-GDETFKAHKLILAARSPVFRAQFYGLVG----DRNLDKVVVKDVEPSIFKAMLLFIYTDKFPDVYE---I--T 258 (337)
Q Consensus 189 Dv~~~v-~~~~~~~hk~iLa~~S~~F~~~~~~~~~----e~~~~~i~l~~~~~~~f~~~L~~iYt~~~~~~~~---~--~ 258 (337)
-|+|+. +|+.|.+++.+ |.+|..++.|+..... +.....|+|++++..+++.+++|++...-..... . .
T Consensus 8 ~i~L~SsDG~~F~V~~~v-A~~S~tIk~ml~~~~~~~~~~~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~~~~~~ 86 (169)
T 3v7d_A 8 NVVLVSGEGERFTVDKKI-AERSLLLKNYLNDMGDDDDEDDDEIVMPVPNVRSSVLQKVIEWAEHHRDSNFPDEDDDDSR 86 (169)
T ss_dssp EEEEECTTCCEEEEEHHH-HTTSHHHHHHHHC-----------CEEECTTCCHHHHHHHHHHHHHTTTCCCCC-------
T ss_pred eEEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcCcccccccCCCceeeCCCCHHHHHHHHHHHHHcccCCCccccccccc
Confidence 456665 67889999997 7899999999975322 1234679999999999999999998754321100 0 0
Q ss_pred CC----C----CccchHHHHHHHHHHhhccChhHHHHHHHHHHhccCC---hhhHHHHHHHHHh
Q 019649 259 GT----T----SMCTTTNMVQHLLAAADLYNVDRLKLLCESKLCEELN---AETVATTLALAEQ 311 (337)
Q Consensus 259 ~~----~----~~~~~~~~~~~ll~~A~~~~~~~l~~~ce~~l~~~~~---~~n~~~~l~~A~~ 311 (337)
.. . ........+.+|+.||++++++.|.+.|++.+...+. ++-+..++.+...
T Consensus 87 ~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~Lldl~c~~vA~~ikgktpeeiR~~f~I~nd 150 (169)
T 3v7d_A 87 KSAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKVVAEMIRGRSPEEIRRTFNIVND 150 (169)
T ss_dssp -CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCHHHHHHHHTCCCC
T ss_pred ccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCC
Confidence 00 0 0234568999999999999999999999999865544 4444444444333
No 39
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=98.47 E-value=2.1e-07 Score=66.79 Aligned_cols=89 Identities=13% Similarity=0.204 Sum_probs=62.0
Q ss_pred eEEEe-CCeEEeeehHHHHhcCHHHHHHhcc--cccCCCCCcEEecCCCHHHHHHHhhhhccCCCC--CcccccCCCCcc
Q 019649 190 IVFEV-GDETFKAHKLILAARSPVFRAQFYG--LVGDRNLDKVVVKDVEPSIFKAMLLFIYTDKFP--DVYEITGTTSMC 264 (337)
Q Consensus 190 v~~~v-~~~~~~~hk~iLa~~S~~F~~~~~~--~~~e~~~~~i~l~~~~~~~f~~~L~~iYt~~~~--~~~~~~~~~~~~ 264 (337)
|+|+. +|+.|.+++.+ |..|+.++.|+.+ .+.|+....|+|++++..+++.+++|+|...-. ...+.. .+ .
T Consensus 3 v~L~SsDg~~f~V~~~~-A~~S~~ik~ml~~~~~~~e~~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~i~--~w-~ 78 (96)
T 2fnj_C 3 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIP--EF-P 78 (96)
T ss_dssp EEEECTTSCEEEEEHHH-HTTSHHHHHHHHCC--------CEEECSSCCHHHHHHHHHHHHHHHHHHSCCSCCC--CC-C
T ss_pred EEEEecCCCEEEeCHHH-HHHhHHHHHHHHccCCcccccCCceeCCCCCHHHHHHHHHHHHHccccCCCcccCC--Cc-c
Confidence 45665 78999999996 8999999999975 235666678999999999999999999864310 000000 01 2
Q ss_pred chHHHHHHHHHHhhccCh
Q 019649 265 TTTNMVQHLLAAADLYNV 282 (337)
Q Consensus 265 ~~~~~~~~ll~~A~~~~~ 282 (337)
...+.+.+|+.||+++++
T Consensus 79 vd~~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 79 IAPEIALELLMAANFLDC 96 (96)
T ss_dssp CCTTTHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHHhCc
Confidence 334789999999999864
No 40
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=98.08 E-value=7.1e-06 Score=60.40 Aligned_cols=90 Identities=13% Similarity=0.193 Sum_probs=62.8
Q ss_pred CeEEE-eCCeEEeeehHHHHhcCHHHHHHhcc--cccCCCCCcEEecCCCHHHHHHHhhhhccCCCC--CcccccCCCCc
Q 019649 189 DIVFE-VGDETFKAHKLILAARSPVFRAQFYG--LVGDRNLDKVVVKDVEPSIFKAMLLFIYTDKFP--DVYEITGTTSM 263 (337)
Q Consensus 189 Dv~~~-v~~~~~~~hk~iLa~~S~~F~~~~~~--~~~e~~~~~i~l~~~~~~~f~~~L~~iYt~~~~--~~~~~~~~~~~ 263 (337)
-|+|+ .+|..|.+++. .|..|+.++.|+.. .+.+.....|+|++++..+++.+++|++...-. ...+.. .+
T Consensus 18 ~v~L~SsDG~~F~V~~~-~A~~S~tIk~ml~~~~~~~e~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~i~--~w- 93 (112)
T 1vcb_B 18 YVKLISSDGHEFIVKRE-HALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIP--EF- 93 (112)
T ss_dssp EEEEECTTSCEEEEEHH-HHHTSHHHHHHSSCC--------CEEECSSCCHHHHHHHHHHHHHHHHHSSCSSCCC--CC-
T ss_pred EEEEEcCCCCEEEECHH-HHHHhHHHHHHHHhcCCcccccCCceeCCCCCHHHHHHHHHHHHHhhhccCCcCCCC--Cc-
Confidence 46666 47889999998 57899999999974 334555568999999999999999999854311 000000 01
Q ss_pred cchHHHHHHHHHHhhccCh
Q 019649 264 CTTTNMVQHLLAAADLYNV 282 (337)
Q Consensus 264 ~~~~~~~~~ll~~A~~~~~ 282 (337)
......+.+|+.+|+++++
T Consensus 94 ~vd~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 94 PIAPEIALELLMAANFLDC 112 (112)
T ss_dssp CCCHHHHHHHHHHHHHHTC
T ss_pred ccCHHHHHHHHHHHHHhCc
Confidence 2456899999999999874
No 41
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=97.64 E-value=7.3e-05 Score=60.40 Aligned_cols=97 Identities=18% Similarity=0.261 Sum_probs=75.0
Q ss_pred CCeEEEeCCeEEeeehHHHHhcC-HHHHHHhccccc----CCCCCcEEecCCCHHHHHHHhhhhccCCCCCcccccCCCC
Q 019649 188 CDIVFEVGDETFKAHKLILAARS-PVFRAQFYGLVG----DRNLDKVVVKDVEPSIFKAMLLFIYTDKFPDVYEITGTTS 262 (337)
Q Consensus 188 ~Dv~~~v~~~~~~~hk~iLa~~S-~~F~~~~~~~~~----e~~~~~i~l~~~~~~~f~~~L~~iYt~~~~~~~~~~~~~~ 262 (337)
.=|.|.|||..|...+..|.... .+|.+||.+... .....++-| |-+|..|+.+|+|+.++.+....+.
T Consensus 12 ~~V~LNVGG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFI-DRDP~~F~~ILnyLRtG~L~lP~~~----- 85 (202)
T 3drx_A 12 KWVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRDPTYFGPVLNYLRHGKLVINKDL----- 85 (202)
T ss_dssp CEEEEEETTEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEE-CSCSTTHHHHHHHHHHSCCCCCTTS-----
T ss_pred CEEEEEECCEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEe-cCChHHHHHHHHHhcCCccCCCCCC-----
Confidence 45778999999999999998664 378888865311 112334544 6899999999999999998776521
Q ss_pred ccchHHHHHHHHHHhhccChhHHHHHHHHHHhcc
Q 019649 263 MCTTTNMVQHLLAAADLYNVDRLKLLCESKLCEE 296 (337)
Q Consensus 263 ~~~~~~~~~~ll~~A~~~~~~~l~~~ce~~l~~~ 296 (337)
....+++-|++|+++.|.+.|++.|.+.
T Consensus 86 ------~~~~l~eEA~FygL~~Lv~~l~~~i~er 113 (202)
T 3drx_A 86 ------AEEGVLEEAEFYNITSLIKLVKDKIRER 113 (202)
T ss_dssp ------CHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ------CHHHHHHHHHHCCcHHHHHHHHHHHHHH
Confidence 2357999999999999999999988753
No 42
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.25 E-value=0.00015 Score=52.83 Aligned_cols=43 Identities=16% Similarity=0.169 Sum_probs=38.4
Q ss_pred HhccCChhhHHHHHHHHHhCCChHHHHHHHHhccCcCChHhhhcC
Q 019649 293 LCEELNAETVATTLALAEQHQCPQLKAICLKFAATPANLGGACCS 337 (337)
Q Consensus 293 l~~~~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~~~~~~i~~s 337 (337)
+.+.+++.||+.++.+|+.|++..|++.|.+||. .||.+++++
T Consensus 4 ~~~~L~~~NCl~i~~~A~~~~~~~L~~~a~~fi~--~nF~~v~~~ 46 (105)
T 2eqx_A 4 GSSGVQVGNCLQVMWLADRHSDPELYTAAKHCAK--THLAQLQNT 46 (105)
T ss_dssp CCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHH--HTCHHHHTS
T ss_pred hhccCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH--HHHHHHHhc
Confidence 3457899999999999999999999999999999 999988764
No 43
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=96.43 E-value=0.00063 Score=50.12 Aligned_cols=96 Identities=14% Similarity=0.214 Sum_probs=66.2
Q ss_pred CeEEEeCCeEEeeehHHHHhcCH-HHHHHhcccc-cCCCCCcEEecCCCHHHHHHHhhhhccCCCCCcccccCCCCccch
Q 019649 189 DIVFEVGDETFKAHKLILAARSP-VFRAQFYGLV-GDRNLDKVVVKDVEPSIFKAMLLFIYTDKFPDVYEITGTTSMCTT 266 (337)
Q Consensus 189 Dv~~~v~~~~~~~hk~iLa~~S~-~F~~~~~~~~-~e~~~~~i~l~~~~~~~f~~~L~~iYt~~~~~~~~~~~~~~~~~~ 266 (337)
-|+|.|||..|...+..|..... .+.+|+.+.. .....+++-+ |-+|..|+.+|+|+.+|.+..+..
T Consensus 6 ~V~LNVGG~~f~T~~~TL~~~P~s~L~~l~~~~~~~~~~~g~~Fi-DRdp~~F~~ILnylR~G~l~~p~~---------- 74 (115)
T 3kvt_A 6 RVIINVGGIRHETYKATLKKIPATRLSRLTEGMLNYDPVLNEYFF-DRHPGVFAQIINYYRSGKLHYPTD---------- 74 (115)
T ss_dssp EEEEEETTEEEEEEHHHHTTSCSSTTTTCCTTSTTEETTTTEEEE-CSCTTTHHHHHHHHHHSCBCCCSS----------
T ss_pred EEEEEECCEEEEecHHHHhcCCCccHHHHhcCCCCCCCCCCcEEE-ecChHHHHHHHHHhcCCCCCCCCc----------
Confidence 47899999999999999986643 4455554321 1123344544 689999999999999998876542
Q ss_pred HHHHHHHHHHhhccChhHHHHH--HHHHHhcc
Q 019649 267 TNMVQHLLAAADLYNVDRLKLL--CESKLCEE 296 (337)
Q Consensus 267 ~~~~~~ll~~A~~~~~~~l~~~--ce~~l~~~ 296 (337)
..+..+++-|+.|+++...-. |...+.+.
T Consensus 75 -~~~~~~~~Ea~fy~i~~~~l~~CC~~~~~~~ 105 (115)
T 3kvt_A 75 -VCGPLFEEELEFWGLDSNQVEPCCWMTYTAH 105 (115)
T ss_dssp -SCHHHHHHHHHHHTCCGGGBCGGGSHHHHSC
T ss_pred -ccHHHHHHHHHHhCCChHHHHHHHHHHHHhc
Confidence 135688999999999765322 44444443
No 44
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=96.12 E-value=0.0036 Score=46.69 Aligned_cols=93 Identities=15% Similarity=0.151 Sum_probs=64.3
Q ss_pred CCCeEEEeCCeEEeeehHHHHhcCHHHHHHhcccc----cCCCCCcEEecCCCHHHHHHHhhhhccCCCCCcccccCCCC
Q 019649 187 GCDIVFEVGDETFKAHKLILAARSPVFRAQFYGLV----GDRNLDKVVVKDVEPSIFKAMLLFIYTDKFPDVYEITGTTS 262 (337)
Q Consensus 187 ~~Dv~~~v~~~~~~~hk~iLa~~S~~F~~~~~~~~----~e~~~~~i~l~~~~~~~f~~~L~~iYt~~~~~~~~~~~~~~ 262 (337)
..-|+|.|||..|...+..|..... ++|.... .....+++-| |-++..|+.+|+|+-+|.+....+
T Consensus 12 ~~~V~LNVGG~~F~t~~~TL~~~p~---S~L~~~~~~~~~~~~~g~~Fi-DRdp~~F~~ILnflR~G~l~~p~~------ 81 (124)
T 1s1g_A 12 DELIVLNVSGRRFQTWRTTLERYPD---TLLGSTEKEFFFNEDTKEYFF-DRDPEVFRCVLNFYRTGKLHYPRY------ 81 (124)
T ss_dssp CCEEEEEETTEEEEEEHHHHTTSTT---SSTTSSGGGGTBCSSSCSEEE-CSCHHHHHHHHHHHHHSCBCCCTT------
T ss_pred CCEEEEEeCCEEEEEeHHHHhcCCC---ceecccCCcccccCCCCcEEE-cCChHHHHHHHHHHhcCCCCCCCC------
Confidence 3468899999999999999975432 2332210 1122344544 669999999999999999876542
Q ss_pred ccchHHHHHHHHHHhhccChhHH-HHH-HHHHHh
Q 019649 263 MCTTTNMVQHLLAAADLYNVDRL-KLL-CESKLC 294 (337)
Q Consensus 263 ~~~~~~~~~~ll~~A~~~~~~~l-~~~-ce~~l~ 294 (337)
..+..+++-|+.|+++.+ +.. |...+.
T Consensus 82 -----~~~~~l~~Ea~fy~i~~l~l~~cC~~~~~ 110 (124)
T 1s1g_A 82 -----ECISAYDDELAFYGILPEIIGDCCYEEYK 110 (124)
T ss_dssp -----SCHHHHHHHHHHTTCCGGGBCHHHHHHHH
T ss_pred -----cCHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 236789999999999876 344 444433
No 45
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=95.84 E-value=0.0076 Score=43.06 Aligned_cols=89 Identities=12% Similarity=0.106 Sum_probs=60.6
Q ss_pred eEEEeCCeEEeeehHHHHhcCH-HHHHHhcc-cccCCCCCcEEecCCCHHHHHHHhhhhcc-CCCCCcccccCCCCccch
Q 019649 190 IVFEVGDETFKAHKLILAARSP-VFRAQFYG-LVGDRNLDKVVVKDVEPSIFKAMLLFIYT-DKFPDVYEITGTTSMCTT 266 (337)
Q Consensus 190 v~~~v~~~~~~~hk~iLa~~S~-~F~~~~~~-~~~e~~~~~i~l~~~~~~~f~~~L~~iYt-~~~~~~~~~~~~~~~~~~ 266 (337)
|+|.|||..|...+..|+..-. .+.+|+.. ..-....+++-+ |-+|..|+.+|+|+-+ |.+..+..
T Consensus 3 v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~~eyFi-DRdp~~F~~ILnflR~~G~l~~p~~---------- 71 (100)
T 1t1d_A 3 VVINVSGLRFETQLKTLNQFPDTLLGNPQKRNRYYDPLRNEYFF-DRNRPSFDAILYFYQSGGRLRRPVN---------- 71 (100)
T ss_dssp EEEEETTEEEEEEHHHHHTSTTSTTTCHHHHGGGEETTTTEEEE-CSCSTTHHHHHHHHHTTSCCCCCTT----------
T ss_pred EEEEECCEEEEeeHHHHhcCCCccccchhccccccCCCceeEEE-cCChHHHHHHHHHHhcCCcccCCCC----------
Confidence 6899999999999999975421 22333321 111123345554 6799999999999998 78765542
Q ss_pred HHHHHHHHHHhhccChhHH-HHHHH
Q 019649 267 TNMVQHLLAAADLYNVDRL-KLLCE 290 (337)
Q Consensus 267 ~~~~~~ll~~A~~~~~~~l-~~~ce 290 (337)
..+..+++-|+.|+++.+ +..|.
T Consensus 72 -~~~~~~~~Ea~fy~i~~~~~~~~~ 95 (100)
T 1t1d_A 72 -VPLDVFSEEIKFYELGENAFERYR 95 (100)
T ss_dssp -SCHHHHHHHHHHTTCCHHHHHHHH
T ss_pred -CCHHHHHHHHHHcCCCHHHHHHHH
Confidence 235789999999999764 44443
No 46
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=95.35 E-value=0.0032 Score=45.55 Aligned_cols=86 Identities=16% Similarity=0.177 Sum_probs=60.0
Q ss_pred eEEEeCCeEEeeehHHHHhcCHHHHHHhccccc----CCCCCcEEecCCCHHHHHHHhhhhccCCCCCcccccCCCCccc
Q 019649 190 IVFEVGDETFKAHKLILAARSPVFRAQFYGLVG----DRNLDKVVVKDVEPSIFKAMLLFIYTDKFPDVYEITGTTSMCT 265 (337)
Q Consensus 190 v~~~v~~~~~~~hk~iLa~~S~~F~~~~~~~~~----e~~~~~i~l~~~~~~~f~~~L~~iYt~~~~~~~~~~~~~~~~~ 265 (337)
|+|.|||..|...+..|..... +||....+ ....+++-+ |-+|..|+.+|+|+-+|.+..+.+
T Consensus 2 V~LNVGG~~f~t~~~TL~~~p~---s~L~~~~~~~~~~~~~~~~Fi-DRdp~~F~~ILnflR~g~l~~p~~--------- 68 (105)
T 1nn7_A 2 IVLNVSGTRFQTWQDTLERYPD---TLLGSSERDFFYHPETQQYFF-DRDPDIFRHILNFYRTGKLHYPRH--------- 68 (105)
T ss_dssp EEEEETTEEEEECHHHHHTSCS---SSTTSGGGGGGEEGGGTEEEE-CSCTTTHHHHHHHHHHSCBCCCTT---------
T ss_pred EEEEECCEEEEEeHHHHhcCCC---ccccccCCcccccCCCCcEEE-eCCcHHHHHHHHHHhcCCCCCCCC---------
Confidence 6899999999999999986532 23322101 112233443 669999999999999998876542
Q ss_pred hHHHHHHHHHHhhccChhHH-HHHHH
Q 019649 266 TTNMVQHLLAAADLYNVDRL-KLLCE 290 (337)
Q Consensus 266 ~~~~~~~ll~~A~~~~~~~l-~~~ce 290 (337)
..+..+++-|+.|+++.+ +..|+
T Consensus 69 --~~~~~l~~Ea~fy~i~~l~~~~cc 92 (105)
T 1nn7_A 69 --ECISAYDEELAFFGLIPEIIGDCC 92 (105)
T ss_dssp --SCHHHHHHHHHHHTCCSCCBCHHH
T ss_pred --cCHHHHHHHHHHcCCCHHHHHHHH
Confidence 136789999999999876 34443
No 47
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=95.12 E-value=0.02 Score=43.61 Aligned_cols=85 Identities=15% Similarity=0.187 Sum_probs=61.0
Q ss_pred CCCCeEEEeCCeEEeeehHHHHhcCHHHHHHhccccc----CCCCCcEEecCCCHHHHHHHhhhhccCCCCCcccccCCC
Q 019649 186 IGCDIVFEVGDETFKAHKLILAARSPVFRAQFYGLVG----DRNLDKVVVKDVEPSIFKAMLLFIYTDKFPDVYEITGTT 261 (337)
Q Consensus 186 ~~~Dv~~~v~~~~~~~hk~iLa~~S~~F~~~~~~~~~----e~~~~~i~l~~~~~~~f~~~L~~iYt~~~~~~~~~~~~~ 261 (337)
...-|+|.|||..|...+..|.... .+||..... ....+++-| |-++..|+.+|+|+-+|.+....+
T Consensus 33 ~~~~V~LNVGG~~F~T~~~TL~~~P---~S~L~~~~~~~~~~~~~g~yFi-DRdp~~F~~ILnflR~G~l~~p~~----- 103 (140)
T 2nz0_B 33 QDELIVLNVSGRRFQTWRTTLERYP---DTLLGSTEKEFFFNEDTKEYFF-DRDPEVFRCVLNFYRTGKLHYPRY----- 103 (140)
T ss_dssp CCCEEEEEETTEEEEEEHHHHHTCT---TSTTTSGGGGGSEETTTTEEEE-CSCHHHHHHHHHHHHHSSBCCCTT-----
T ss_pred CCCEEEEEECCEEEEeeHHHHhcCC---CeeecccCCcccccCCCCeEEE-eCCcHHHHHHHHHHhcCCcCCCCC-----
Confidence 3456889999999999999998643 234432111 112234444 679999999999999998876542
Q ss_pred CccchHHHHHHHHHHhhccChhHH
Q 019649 262 SMCTTTNMVQHLLAAADLYNVDRL 285 (337)
Q Consensus 262 ~~~~~~~~~~~ll~~A~~~~~~~l 285 (337)
..+..+++-|+.|+++.+
T Consensus 104 ------~~~~~l~eEa~fy~i~~l 121 (140)
T 2nz0_B 104 ------ECISAYDDELAFYGILPE 121 (140)
T ss_dssp ------SCHHHHHHHHHHHTCCGG
T ss_pred ------cCHHHHHHHHHHcCCChH
Confidence 136789999999999876
No 48
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=88.89 E-value=0.2 Score=35.83 Aligned_cols=30 Identities=37% Similarity=0.546 Sum_probs=28.3
Q ss_pred CChhhHHHHHHHHHhCCChHHHHHHHHhcc
Q 019649 297 LNAETVATTLALAEQHQCPQLKAICLKFAA 326 (337)
Q Consensus 297 ~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~ 326 (337)
++.+|+..++.+|++|+++.|++.|.+|+.
T Consensus 77 ~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~ 106 (109)
T 2vkp_A 77 LEADTVLATLYAAKKYIVPALAKACVNFLE 106 (109)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 577899999999999999999999999987
No 49
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=87.24 E-value=0.5 Score=35.41 Aligned_cols=34 Identities=18% Similarity=0.303 Sum_probs=28.7
Q ss_pred CChhhHHHHHHHHHhCCChHHHHHHHHhccCcCChH
Q 019649 297 LNAETVATTLALAEQHQCPQLKAICLKFAATPANLG 332 (337)
Q Consensus 297 ~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~~~~~ 332 (337)
++.+|+..++..|+.|++..|++.|.+|+. +++.
T Consensus 87 i~~~~v~~ll~~A~~l~i~~L~~~C~~~l~--~~l~ 120 (135)
T 2yy9_A 87 LTSGNRDQVLLAAKELRVPEAVELCQSFQP--QTSV 120 (135)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHCCC------
T ss_pred CCHHHHHHHHHHHHHhCcHHHHHHHHHHHH--Hhcc
Confidence 678899999999999999999999999998 6654
No 50
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=86.31 E-value=0.35 Score=36.39 Aligned_cols=33 Identities=15% Similarity=0.296 Sum_probs=30.4
Q ss_pred CChhhHHHHHHHHHhCCChHHHHHHHHhccCcCCh
Q 019649 297 LNAETVATTLALAEQHQCPQLKAICLKFAATPANL 331 (337)
Q Consensus 297 ~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~~~~ 331 (337)
++.+|+..++..|+.|++..|++.|.+||. .++
T Consensus 101 i~~~~v~~ll~~A~~~~i~~L~~~C~~~l~--~~l 133 (138)
T 2z8h_A 101 LSKDNVDEVCRCVEFLSVHNIEESCFQFLK--FKF 133 (138)
T ss_dssp CCTTTHHHHHHHHHHHTCGGGHHHHHHHTT--CCC
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHH--Hhc
Confidence 678899999999999999999999999998 654
No 51
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=84.85 E-value=0.81 Score=33.32 Aligned_cols=30 Identities=27% Similarity=0.371 Sum_probs=28.2
Q ss_pred CChhhHHHHHHHHHhCCChHHHHHHHHhcc
Q 019649 297 LNAETVATTLALAEQHQCPQLKAICLKFAA 326 (337)
Q Consensus 297 ~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~ 326 (337)
++.+|+..++..|+.++++.|++.|.+|+.
T Consensus 88 i~~~~~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 88 LSPENVDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 677899999999999999999999999986
No 52
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=84.48 E-value=0.82 Score=33.27 Aligned_cols=30 Identities=20% Similarity=0.388 Sum_probs=27.6
Q ss_pred CChhhHHHHHHHHHhCCChHHHHHHHHhcc
Q 019649 297 LNAETVATTLALAEQHQCPQLKAICLKFAA 326 (337)
Q Consensus 297 ~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~ 326 (337)
++.+|+..++..|+.|+++.|++.|.+|+.
T Consensus 86 ~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (119)
T 3b84_A 86 LTSGNRDQVLLAARELRVPEAVELCQSFKP 115 (119)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHCC-
T ss_pred cCHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 577899999999999999999999999997
No 53
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=83.76 E-value=0.91 Score=33.40 Aligned_cols=30 Identities=23% Similarity=0.309 Sum_probs=28.3
Q ss_pred CChhhHHHHHHHHHhCCChHHHHHHHHhcc
Q 019649 297 LNAETVATTLALAEQHQCPQLKAICLKFAA 326 (337)
Q Consensus 297 ~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~ 326 (337)
++.+|+..++..|+.|+++.|++.|.+||.
T Consensus 95 ~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~ 124 (127)
T 1r29_A 95 LREGNIMAVMATAMYLQMEHVVDTCRKFIK 124 (127)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 577899999999999999999999999997
No 54
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=83.58 E-value=1 Score=32.57 Aligned_cols=30 Identities=13% Similarity=0.098 Sum_probs=28.0
Q ss_pred CChhhHHHHHHHHHhCCChHHHHHHHHhcc
Q 019649 297 LNAETVATTLALAEQHQCPQLKAICLKFAA 326 (337)
Q Consensus 297 ~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~ 326 (337)
++.+|+..++..|+.|+++.|++.|.+|+.
T Consensus 86 ~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 86 LDSWNVKEIHQAADYLKVEEVVTKCKIKME 115 (116)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 577899999999999999999999999986
No 55
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=82.23 E-value=1.4 Score=32.02 Aligned_cols=29 Identities=17% Similarity=0.393 Sum_probs=27.1
Q ss_pred CChhhHHHHHHHHHhCCChHHHHHHHHhc
Q 019649 297 LNAETVATTLALAEQHQCPQLKAICLKFA 325 (337)
Q Consensus 297 ~~~~n~~~~l~~A~~~~~~~L~~~~~~~i 325 (337)
++.+++..++..|+.|+++.|++.|.+|+
T Consensus 91 ~~~~~~~~ll~~A~~~~i~~L~~~C~~~L 119 (120)
T 2if5_A 91 VSTANVGDILSAARLLEIPAVSHVCADLL 119 (120)
T ss_dssp CCGGGHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 57789999999999999999999999986
No 56
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=81.60 E-value=1.1 Score=33.88 Aligned_cols=30 Identities=27% Similarity=0.483 Sum_probs=27.3
Q ss_pred CChhhHHHHHHHHHhCCChHHHHHHHHhcc
Q 019649 297 LNAETVATTLALAEQHQCPQLKAICLKFAA 326 (337)
Q Consensus 297 ~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~ 326 (337)
++.+|+..++.+|+.|++..|++.|.+||.
T Consensus 115 i~~~~v~~ll~~A~~l~i~~L~~~C~~~L~ 144 (144)
T 2ppi_A 115 LNEDTIQDVVQAADLLLLTDLKTLCCEFLE 144 (144)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHTTC-
T ss_pred CCHHHHHHHHHHHHHhCcHHHHHHHHHHhC
Confidence 577899999999999999999999999873
No 57
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=78.19 E-value=1.7 Score=31.55 Aligned_cols=30 Identities=30% Similarity=0.328 Sum_probs=28.1
Q ss_pred CChhhHHHHHHHHHhCCChHHHHHHHHhcc
Q 019649 297 LNAETVATTLALAEQHQCPQLKAICLKFAA 326 (337)
Q Consensus 297 ~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~ 326 (337)
++.+|+..++..|+.|+++.|++.|.+++.
T Consensus 89 ~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~ 118 (121)
T 1buo_A 89 AKAEDLDDLLYAAEILEIEYLEEQCLKMLE 118 (121)
T ss_dssp CCGGGHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Confidence 577899999999999999999999999986
No 58
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=76.67 E-value=1.4 Score=31.27 Aligned_cols=31 Identities=13% Similarity=-0.036 Sum_probs=28.2
Q ss_pred HHHHHHHHHHhhccChhHHHHHHHHHHhccC
Q 019649 267 TNMVQHLLAAADLYNVDRLKLLCESKLCEEL 297 (337)
Q Consensus 267 ~~~~~~ll~~A~~~~~~~l~~~ce~~l~~~~ 297 (337)
..|...++.+|+.|+.+.|...|.+|+.++.
T Consensus 10 ~~NCl~i~~~A~~~~~~~L~~~a~~fi~~nF 40 (105)
T 2eqx_A 10 VGNCLQVMWLADRHSDPELYTAAKHCAKTHL 40 (105)
T ss_dssp TTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 4789999999999999999999999998753
No 59
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=76.53 E-value=2.4 Score=30.88 Aligned_cols=30 Identities=13% Similarity=0.185 Sum_probs=27.6
Q ss_pred CChhhHHHHHHHHHhCCChHHHHHHHHhcc
Q 019649 297 LNAETVATTLALAEQHQCPQLKAICLKFAA 326 (337)
Q Consensus 297 ~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~ 326 (337)
++.+|+..++..|+.+++..|++.|.+++.
T Consensus 87 i~~~~v~~ll~aA~~l~i~~l~~~C~~~~~ 116 (119)
T 3m5b_A 87 LQPGELRPLQEAARALGVQSLEEACWRARG 116 (119)
T ss_dssp ECGGGHHHHHHHHHHTTCHHHHHHHHHHC-
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 578999999999999999999999999987
No 60
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=74.79 E-value=2.5 Score=39.52 Aligned_cols=83 Identities=12% Similarity=0.155 Sum_probs=57.4
Q ss_pred CCeEEEeCCeEEeeehHHHHhcCHHHHHHhcc-----cccCCCCCcEEecCCCHHHHHHHhhhhcc-CCCCCcccccCCC
Q 019649 188 CDIVFEVGDETFKAHKLILAARSPVFRAQFYG-----LVGDRNLDKVVVKDVEPSIFKAMLLFIYT-DKFPDVYEITGTT 261 (337)
Q Consensus 188 ~Dv~~~v~~~~~~~hk~iLa~~S~~F~~~~~~-----~~~e~~~~~i~l~~~~~~~f~~~L~~iYt-~~~~~~~~~~~~~ 261 (337)
.-|+|.|||..|...+..|...- .+++.. ..-....+++-+ |=+|..|+.+|+|+.+ |.+..+.+.
T Consensus 52 ~~v~lNVgG~~f~t~~~tL~~~p---~s~l~~~~~~~~~~~~~~~~~f~-DR~~~~F~~IL~~~r~~g~l~~p~~~---- 123 (514)
T 2r9r_B 52 ERVVINISGLRFETQLKTLAQFP---ETLLGDPKKRMRYFDPLRNEYFF-DRNRPSFDAILYYYQSGGRLRRPVNV---- 123 (514)
T ss_dssp CEEEEEETTEEEEEEHHHHTTST---TSTTTCHHHHGGGEETTTTEEEE-CSCHHHHHHHHHHHHHTSCCCCCTTS----
T ss_pred CEEEEEeCCEEEEecHHHHhcCC---CCcccccccCCcccCCCCCCEEE-cCChHHHHHHHHHHhcCCccccCCcc----
Confidence 45788999999999999987432 122211 111123345554 7899999999999999 887665421
Q ss_pred CccchHHHHHHHHHHhhccChhHH
Q 019649 262 SMCTTTNMVQHLLAAADLYNVDRL 285 (337)
Q Consensus 262 ~~~~~~~~~~~ll~~A~~~~~~~l 285 (337)
....+++=|+.|+++.+
T Consensus 124 -------~~~~~~~E~~f~~i~~~ 140 (514)
T 2r9r_B 124 -------PLDIFSEEIRFYELGEE 140 (514)
T ss_dssp -------CHHHHHHHHHHTTCCHH
T ss_pred -------cHHHHHHHHHhcCCCHH
Confidence 24577888899998764
No 61
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=73.46 E-value=2.2 Score=31.97 Aligned_cols=30 Identities=20% Similarity=0.198 Sum_probs=26.1
Q ss_pred CChhhHHHHHHHHHhCCChHHHHHHHHhcc
Q 019649 297 LNAETVATTLALAEQHQCPQLKAICLKFAA 326 (337)
Q Consensus 297 ~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~ 326 (337)
++.+++..++.+|+.|.++.|+..|.+++.
T Consensus 91 ~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~ 120 (145)
T 4eoz_A 91 NLDKMADDLLAAADKYALERLKVMCEDALC 120 (145)
T ss_dssp TGGGTHHHHHHHHHHTTCHHHHHHHHCC--
T ss_pred CcHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 467789999999999999999999999998
No 62
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=69.99 E-value=2.4 Score=32.82 Aligned_cols=31 Identities=23% Similarity=0.195 Sum_probs=27.8
Q ss_pred HHHHHHHHHhhccChhHHHHHHHHHHhccCC
Q 019649 268 NMVQHLLAAADLYNVDRLKLLCESKLCEELN 298 (337)
Q Consensus 268 ~~~~~ll~~A~~~~~~~l~~~ce~~l~~~~~ 298 (337)
+++..++.+|++|+++.|+..|.+++.+++.
T Consensus 135 ~n~~~~~~~A~~~~~~~L~~~~~~~i~~~~~ 165 (172)
T 3htm_A 135 ENAAEILILADLHSADQLKTQAVDFINYHAT 165 (172)
T ss_dssp TTHHHHHHHHHHTTCHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 5789999999999999999999999988643
No 63
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=66.84 E-value=4.2 Score=31.30 Aligned_cols=38 Identities=16% Similarity=0.088 Sum_probs=32.1
Q ss_pred HHHHHHHhccCChhhHHHHHHHHHhCCChHHHHHHHHhcc
Q 019649 287 LLCESKLCEELNAETVATTLALAEQHQCPQLKAICLKFAA 326 (337)
Q Consensus 287 ~~ce~~l~~~~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~ 326 (337)
....+|+ .++..++..++..|...+...|.+.|.++++
T Consensus 86 ~wD~~F~--~id~~~l~eLl~AAnyL~I~~Lld~~c~~va 123 (159)
T 2ast_A 86 VWDQEFL--KVDQGTLFELILAANYLDIKGLLDVTCKTVA 123 (159)
T ss_dssp HHHHHHT--CSCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHH--cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 3344455 3799999999999999999999999999996
No 64
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=65.28 E-value=1.1 Score=33.08 Aligned_cols=31 Identities=13% Similarity=0.023 Sum_probs=23.3
Q ss_pred cCChhhHHHHHHHHHhCCChHHHHHHHHhcc
Q 019649 296 ELNAETVATTLALAEQHQCPQLKAICLKFAA 326 (337)
Q Consensus 296 ~~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~ 326 (337)
.++.+|+..++..|+.+++..|++.|.+|+.
T Consensus 95 ~i~~~~~~~ll~~A~~~~i~~l~~~C~~~L~ 125 (129)
T 3ga1_A 95 SMNVGDQDLLMYTAGFLQIQEIMEKGTEFFL 125 (129)
T ss_dssp ECCTTTHHHHHHHHHHTTBTTSSCC------
T ss_pred ccCHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 3688899999999999999999999999997
No 65
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=62.64 E-value=0.73 Score=33.85 Aligned_cols=30 Identities=20% Similarity=0.332 Sum_probs=27.2
Q ss_pred CChhhHHHHHHHHHhCCChHHHHHHHHhcc
Q 019649 297 LNAETVATTLALAEQHQCPQLKAICLKFAA 326 (337)
Q Consensus 297 ~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~ 326 (337)
++.+|+..++..|+.|+++.|++.|.+|+.
T Consensus 94 i~~~~v~~ll~~A~~~~~~~L~~~C~~~l~ 123 (124)
T 2ihc_A 94 LSKENVDEVCKCVEFLSVHNIEESCFQFLK 123 (124)
T ss_dssp EETTTHHHHHHHHHHHTBSSCCGGGGGTC-
T ss_pred cCHHHHHHHHHHHHHHCCHHHHHHHHHHHh
Confidence 577899999999999999999999999985
No 66
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=60.69 E-value=8.6 Score=28.83 Aligned_cols=38 Identities=16% Similarity=0.088 Sum_probs=31.9
Q ss_pred HHHHHHHhccCChhhHHHHHHHHHhCCChHHHHHHHHhcc
Q 019649 287 LLCESKLCEELNAETVATTLALAEQHQCPQLKAICLKFAA 326 (337)
Q Consensus 287 ~~ce~~l~~~~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~ 326 (337)
..-.+|+ .++..++.+++..|...+...|.+.|.++++
T Consensus 81 ~wD~~F~--~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA 118 (141)
T 1fs1_B 81 VWDQEFL--KVDQGTLFELILAANYLDIKGLLDVTCKTVA 118 (141)
T ss_dssp HHHHHHT--CSCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHH--hCCHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 3334445 3799999999999999999999999999996
No 67
>3v0r_A Major allergen ALT A 1; beta-barrel, cell WALL, unknown function; HET: 0FU 8AC; 1.90A {Alternaria alternata}
Probab=58.77 E-value=1.9 Score=31.61 Aligned_cols=30 Identities=20% Similarity=0.277 Sum_probs=22.2
Q ss_pred ceeeEEEEEEcccccccCCCCCCeeeecccee
Q 019649 16 TVNGSHQFTVKGYSLAKGMGPGKCLSSDVFTV 47 (337)
Q Consensus 16 ~~~~~~~w~I~~fs~~~~~~~~~~~~S~~f~~ 47 (337)
...|.++|+|.+|+..|. .|..+.|=.|.+
T Consensus 9 ~~~gd~vwkIs~F~~RKp--eGty~nsvsFnI 38 (133)
T 3v0r_A 9 TTEGDYVWKISEFYGRKP--EGTYYNSLGFNI 38 (133)
T ss_dssp CCCCTTEEEEEEEEEEET--TSSSCSEEEEEE
T ss_pred ccCCceEEEeeeeeeEcC--CCCceeeEEEEE
Confidence 457889999999988864 577766665544
No 68
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=57.80 E-value=5.1 Score=34.45 Aligned_cols=31 Identities=23% Similarity=0.195 Sum_probs=27.7
Q ss_pred HHHHHHHHHhhccChhHHHHHHHHHHhccCC
Q 019649 268 NMVQHLLAAADLYNVDRLKLLCESKLCEELN 298 (337)
Q Consensus 268 ~~~~~ll~~A~~~~~~~l~~~ce~~l~~~~~ 298 (337)
+++..+|.+|++|.++.|+..|.++|..++.
T Consensus 275 ~n~~~~l~~A~~~~~~~L~~~~~~~i~~~~~ 305 (312)
T 3hqi_A 275 ENAAEILILADLHSADQLKTQAVDFINYHAT 305 (312)
T ss_dssp TTHHHHHHHHHHTTCHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 5789999999999999999999999987643
No 69
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=51.68 E-value=1 Score=32.98 Aligned_cols=29 Identities=24% Similarity=0.411 Sum_probs=26.2
Q ss_pred CChhhHHHHHHHHHhCCChHHHHHHHHhc
Q 019649 297 LNAETVATTLALAEQHQCPQLKAICLKFA 325 (337)
Q Consensus 297 ~~~~n~~~~l~~A~~~~~~~L~~~~~~~i 325 (337)
++.+|+..++..|+.+++..|++.|.+|+
T Consensus 97 ~~~~~v~~ll~~A~~l~i~~L~~~C~~~L 125 (125)
T 3ohu_A 97 LSRENIREVIRCAEFLRMHNLEDSCFSFL 125 (125)
T ss_dssp ECTTTHHHHHHHHHHHTBSSCTTSSCCCC
T ss_pred ECHHHHHHHHHHHHHhCCHHHHHHHHHhC
Confidence 57889999999999999999999998775
No 70
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=48.46 E-value=7.3 Score=32.33 Aligned_cols=30 Identities=27% Similarity=0.483 Sum_probs=27.6
Q ss_pred CChhhHHHHHHHHHhCCChHHHHHHHHhcc
Q 019649 297 LNAETVATTLALAEQHQCPQLKAICLKFAA 326 (337)
Q Consensus 297 ~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~ 326 (337)
++.+|+..++..|+.|+++.|++.|.+|+.
T Consensus 99 i~~~~v~~ll~~A~~l~i~~l~~~c~~~L~ 128 (256)
T 3hve_A 99 LNEDTIQDVVQAADLLLLTDLKTLCCEFLE 128 (256)
T ss_dssp CC-CCHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred ccHhHHHHHHHHHHHHChHHHHHHHHHHHH
Confidence 678899999999999999999999999997
No 71
>2plx_B Peptide inhibitor; helix-turn-helix, hydrolase; HET: FLC; 1.56A {Bos taurus}
Probab=46.64 E-value=20 Score=17.34 Aligned_cols=22 Identities=27% Similarity=0.560 Sum_probs=17.2
Q ss_pred HHHHHHHhCCChHHHHHHHHhc
Q 019649 304 TTLALAEQHQCPQLKAICLKFA 325 (337)
Q Consensus 304 ~~l~~A~~~~~~~L~~~~~~~i 325 (337)
..+-+|.+|+.+.|..+|++-.
T Consensus 3 kvmcyaqrhsspellrrcldnc 24 (26)
T 2plx_B 3 KVMCYAQRHSSPELLRRCLDNC 24 (26)
T ss_dssp HHHHHHBCCCCHHHHHHHHHHH
T ss_pred eEEeehhhcCCHHHHHHHHhcc
Confidence 3466788899999999988754
No 72
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=42.44 E-value=9.7 Score=29.24 Aligned_cols=30 Identities=13% Similarity=0.107 Sum_probs=21.3
Q ss_pred CChhhHHHHHHHHHhCCChHHHHHHHHhcc
Q 019649 297 LNAETVATTLALAEQHQCPQLKAICLKFAA 326 (337)
Q Consensus 297 ~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~ 326 (337)
++..++.+++..|...+...|.+.|.++++
T Consensus 93 vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA 122 (160)
T 2p1m_A 93 IDQATLFELILAANYLNIKNLLDLTCQTVA 122 (160)
T ss_dssp --------CHHHHHHTTCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 688899999999999999999999999997
No 73
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=42.09 E-value=13 Score=31.18 Aligned_cols=30 Identities=27% Similarity=0.431 Sum_probs=28.1
Q ss_pred CChhhHHHHHHHHHhCCChHHHHHHHHhcc
Q 019649 297 LNAETVATTLALAEQHQCPQLKAICLKFAA 326 (337)
Q Consensus 297 ~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~ 326 (337)
++.+|+..++..|+.|++..|++.|.+|+.
T Consensus 107 i~~~~v~~ll~~A~~l~i~~L~~~c~~~L~ 136 (279)
T 3i3n_A 107 VSTGSVHEVLELADRFLLIRLKEFCGEFLK 136 (279)
T ss_dssp EETTTHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHCcHHHHHHHHHHHH
Confidence 567899999999999999999999999997
No 74
>2cmy_B Beta trypsin, veronica hederifolia trypsin inhibitor; acyl-enzyme intermediate, serine protease inhibitor, zymogen protease, digestion; 2.25A {Veronica hederifolia} SCOP: g.2.4.1
Probab=29.57 E-value=38 Score=17.45 Aligned_cols=23 Identities=26% Similarity=0.535 Sum_probs=16.4
Q ss_pred HHHHHHHhCCChHHHHHHHHhcc
Q 019649 304 TTLALAEQHQCPQLKAICLKFAA 326 (337)
Q Consensus 304 ~~l~~A~~~~~~~L~~~~~~~i~ 326 (337)
..+-+|.+++.+.|..+|++-..
T Consensus 8 kvmcyaqrhsspellrrcldnce 30 (34)
T 2cmy_B 8 KVMCYAQRHSSPELLRRCLDNCE 30 (34)
T ss_dssp HHHHHHBC--CCHHHHHHHHHC-
T ss_pred hHHHHHhhcCCHHHHHHHHHhhh
Confidence 45678889999999999988754
No 75
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=23.89 E-value=1.1e+02 Score=23.48 Aligned_cols=30 Identities=17% Similarity=0.088 Sum_probs=27.8
Q ss_pred CChhhHHHHHHHHHhCCChHHHHHHHHhcc
Q 019649 297 LNAETVATTLALAEQHQCPQLKAICLKFAA 326 (337)
Q Consensus 297 ~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~ 326 (337)
++...+.+++..|...+...|.+.|.+.++
T Consensus 101 vd~~~LfeLi~AAnyLdIk~Lldl~c~~vA 130 (169)
T 3v7d_A 101 VDQEMLYEIILAANYLNIKPLLDAGCKVVA 130 (169)
T ss_dssp SCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 688899999999999999999999999884
Done!